BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (671 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 1296 0.0 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 901 0.0 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 807 0.0 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 746 0.0 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 744 0.0 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 691 0.0 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 690 0.0 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 681 0.0 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 677 0.0 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 661 0.0 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 660 0.0 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 655 0.0 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 653 0.0 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 644 0.0 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 637 0.0 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 632 e-179 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 621 e-176 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 620 e-176 UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 619 e-175 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 619 e-175 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 607 e-172 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 605 e-171 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 603 e-171 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 599 e-169 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 598 e-169 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 596 e-169 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 594 e-168 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 594 e-168 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 594 e-168 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 591 e-167 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 591 e-167 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 587 e-166 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 586 e-165 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 584 e-165 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 583 e-164 UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 580 e-164 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 579 e-163 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 579 e-163 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 579 e-163 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 579 e-163 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 578 e-163 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 575 e-162 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 575 e-162 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 575 e-162 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 574 e-162 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 571 e-161 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 568 e-160 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 567 e-160 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 563 e-159 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 561 e-158 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 561 e-158 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 561 e-158 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 556 e-156 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 555 e-156 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 555 e-156 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 553 e-155 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 552 e-155 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 552 e-155 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 551 e-155 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 550 e-155 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 549 e-154 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 548 e-154 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 545 e-153 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 545 e-153 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 543 e-152 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 542 e-152 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 541 e-152 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 540 e-152 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 539 e-151 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 539 e-151 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 538 e-151 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 536 e-151 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 536 e-150 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 533 e-150 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 533 e-149 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 531 e-149 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 529 e-148 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 529 e-148 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 528 e-148 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 528 e-148 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 527 e-148 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 525 e-147 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 524 e-147 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 523 e-147 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 522 e-146 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 520 e-146 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 520 e-146 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 519 e-145 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 518 e-145 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 517 e-145 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 516 e-144 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 515 e-144 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 514 e-144 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 513 e-143 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 513 e-143 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 512 e-143 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 511 e-143 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 507 e-142 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 501 e-140 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 501 e-140 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 497 e-139 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 496 e-138 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 494 e-138 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 493 e-138 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 493 e-137 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 491 e-137 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 490 e-137 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 490 e-137 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 490 e-137 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 489 e-136 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 489 e-136 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 488 e-136 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 488 e-136 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 487 e-136 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 485 e-135 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 485 e-135 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 483 e-135 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 482 e-134 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 479 e-133 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 476 e-133 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 476 e-133 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 476 e-132 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 475 e-132 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 474 e-132 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 474 e-132 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 473 e-131 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 470 e-131 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 468 e-130 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 463 e-129 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 462 e-128 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 457 e-127 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 457 e-127 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 453 e-126 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 449 e-124 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 442 e-122 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 440 e-122 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 440 e-122 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 440 e-121 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 439 e-121 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 437 e-121 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 436 e-120 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 436 e-120 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 436 e-120 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 435 e-120 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 430 e-119 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 429 e-118 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 429 e-118 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 426 e-117 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 424 e-117 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 424 e-117 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 416 e-114 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 415 e-114 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 415 e-114 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 414 e-114 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 413 e-113 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 408 e-112 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 401 e-110 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 400 e-110 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 399 e-109 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 385 e-105 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 384 e-105 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 384 e-105 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 384 e-105 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 375 e-102 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 374 e-102 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 372 e-101 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 371 e-101 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 370 e-101 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 369 e-100 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 365 4e-99 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 364 6e-99 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 363 1e-98 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 362 3e-98 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 362 3e-98 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 357 6e-97 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 353 1e-95 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 349 2e-94 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 346 1e-93 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 345 3e-93 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 345 4e-93 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 344 6e-93 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 342 2e-92 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 341 5e-92 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 336 1e-90 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 336 2e-90 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 335 3e-90 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 335 4e-90 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 335 4e-90 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 328 4e-88 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 327 1e-87 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 325 2e-87 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 325 3e-87 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 324 7e-87 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 316 2e-84 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 315 3e-84 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 315 4e-84 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 312 2e-83 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 310 9e-83 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 307 7e-82 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 306 2e-81 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 306 2e-81 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 300 1e-79 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 298 5e-79 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 281 4e-74 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 271 4e-71 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 270 2e-70 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 266 3e-69 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 254 5e-66 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 250 2e-64 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 249 3e-64 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 239 3e-61 UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schi... 232 4e-59 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 228 7e-58 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 227 1e-57 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 224 1e-56 UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 207 1e-51 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 206 3e-51 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 202 4e-50 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 199 2e-49 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 196 3e-48 UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n... 194 9e-48 UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN 188 8e-46 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 157 1e-36 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 157 1e-36 UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera ar... 155 5e-36 UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacter... 155 5e-36 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 147 1e-33 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 144 9e-33 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 141 1e-31 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 140 2e-31 UniRef50_C4FL15 DNA ligase (Fragment) n=1 Tax=Sulfurihydrogenibi... 138 7e-31 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 135 5e-30 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 131 7e-29 UniRef50_UPI000169996B DNA ligase, NAD-dependent n=1 Tax=Endorif... 127 1e-27 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 124 1e-26 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 122 6e-26 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 121 7e-26 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 119 4e-25 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 118 7e-25 UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp.... 115 5e-24 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 115 7e-24 UniRef50_A8JFJ7 Predicted protein n=1 Tax=Chlamydomonas reinhard... 114 1e-23 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 111 8e-23 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 110 2e-22 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 110 2e-22 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 110 2e-22 UniRef50_B9YY14 DNA ligase (NAD(+)) (Fragment) n=1 Tax='Nostoc a... 108 8e-22 UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 107 2e-21 UniRef50_Q9RFQ8 DNA ligase (Fragment) n=1 Tax=Rhodothermus marin... 104 1e-20 UniRef50_B7N6L0 Putative uncharacterized protein n=1 Tax=Escheri... 103 3e-20 >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 1296 bits (3354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/670 (94%), Positives = 655/670 (97%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELE +HP+LITPDSP+Q Sbjct: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK+ +K+TWCCELKLDGLA Sbjct: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VSILYENGVL+SAATRGDGTTGEDITSNVRTIRAIPLKL G+NIPARLEVRGEVFLPQAG Sbjct: 121 VSILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEKINE+ARRTG KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG+LEGGELPDTHL Sbjct: 181 FEKINEEARRTGNKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL 240 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 GRLLQFK WGLPVSDRVTLC+S E VL FYHKVEEDRPTLGFDIDGVVIKVNS+A QEQL Sbjct: 241 GRLLQFKAWGLPVSDRVTLCDSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMALQEQL 300 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE+TR V FPTHCPVCGSDVERVEG Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPVEFPTHCPVCGSDVERVEG 420 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF+LTAG Sbjct: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG 480 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 KLTGL+RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA Sbjct: 481 KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ASI+ELQKVPDVGIVVA+HV NFFAEESNR+VI +LLAEG+HWPAPIV+NA+EIDSPFAG Sbjct: 541 ASIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGIHWPAPIVVNADEIDSPFAG 600 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+VLTGSLS MSRDDAKARLV LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI+VI Sbjct: 601 KTIVLTGSLSLMSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIDVI 660 Query: 661 DEAEMLRLLG 670 DEAEMLRLLG Sbjct: 661 DEAEMLRLLG 670 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/695 (62%), Positives = 543/695 (78%), Gaps = 29/695 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+S+ +++ +LR L+HHEYLYHV DAPEI DAEYD L+ +LRE E+++PEL+ PDSPTQ Sbjct: 1 MKSMLEKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL------------------ 102 +VGA+P AF + H+VPMLSLDNVFDE+ FLAFNKRV +RL Sbjct: 61 KVGASPSTAFKPVTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDS 120 Query: 103 -------KN-NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 154 KN E +T+CCELKLDGLAVS++YE G L AATRG+G GE+IT N+RTI++ Sbjct: 121 DQKNRSEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQS 180 Query: 155 IPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRI 214 IPL+L G+ +P R+E+RGEV++PQAGFEK+N+ AR K+F+NPRNAAAGSLRQLDP I Sbjct: 181 IPLRLKGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHI 240 Query: 215 TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE 274 TA+RPL FFCYGVG+LEGG LP +H+ RL+Q K WGLPV DR+TLC AE+V+AFY ++ Sbjct: 241 TAQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRITLCTGAEQVMAFYQEIA 300 Query: 275 EDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT 334 + R TLGFDIDG+VIKV+ + QE+LGF+A+APRWA AFKFPAQE+ T V VEFQVGRT Sbjct: 301 QARATLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGRT 360 Query: 335 GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE 394 GA+TPVARLEPV + G LVSNA LHNADEI RLGLRIGD VV+RRAGDVIPQ+VNV++ Sbjct: 361 GALTPVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIES 420 Query: 395 RPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGM 454 RP++T E++FP HCP+C S +R+EGEAV RCTGGL C AQRKE+LKHFV+RRA+D++G+ Sbjct: 421 RPQNTVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVARRALDIEGL 480 Query: 455 GDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYA 514 GDKII QLV+K+YV PADLF LT+ KL L+RM KSAQN++N+L+K+++TTFARFLYA Sbjct: 481 GDKIIHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKTTFARFLYA 540 Query: 515 LGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVIS 574 LGIREVGE TAA LA YFG L+ L A IE L+KVPDVG VVA ++ +FF E ++ VIS Sbjct: 541 LGIREVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGNEHHQQVIS 600 Query: 575 ELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 L + WP P I E+ + PF KTVVLTGSL+ +RDD KA L+ LGAKV+GSVSK Sbjct: 601 A-LESVLDWPDPEPI--EKPNHPFRDKTVVLTGSLNAFTRDDLKAHLISLGAKVSGSVSK 657 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 KTD +IAGE GSK KA++ GI++++E E++ L Sbjct: 658 KTDFLIAGENPGSKAQKAEKSGIKIMNEPELIEFL 692 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/669 (58%), Positives = 500/669 (74%), Gaps = 5/669 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I+++L LR T+ H Y Y+ +D P IPDAEYDRLMR LRE+E + P+ ITPDSPTQRV Sbjct: 7 AIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGLA 120 GAAP F + H +PMLSLDN F+E+ L F++RV++RLK E ++ +CCE KLDG+A Sbjct: 67 GAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDGIA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+LY +G LV TRGDG+ GEDIT+NV+T++ IPLKL GE PA LEVRGE++LP+A Sbjct: 127 ISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPKAA 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+ IN+DA G K F NPRNAAAGSLRQLDPRITAKR L CY VG EG ELP T Sbjct: 187 FDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEG-ELPGTQH 245 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q ++WGL ++ ++ L A+E L +Y + R L ++IDGVV KVN + Q++L Sbjct: 246 DILTQLQQWGLKINSQMKLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDLQQEL 305 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+RAPRWA+A KFPA E+MT + V+FQVGRTGA+TPVARL+PV V GV VSNATLHN Sbjct: 306 GFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNATLHN 365 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI RL + IGD V+IRRAGDVIPQVV+VV RPE+ V P HCPVCGSDV ++EG Sbjct: 366 MDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENAVPVDRPEHCPVCGSDVLQLEG 425 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARC+GGL C AQRKE++KHF SR+AMD+DG+GD++++ LVEKE + +PA L+ L A Sbjct: 426 EAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSPASLYSLKAP 485 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GLERMG KSAQN++NA+E +K+TTFARF+YALGIREVGEATA LA +F TL+ L+ Sbjct: 486 DVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGIREVGEATAKVLAQHFPTLDLLKQ 545 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+ E+L + PD+G + A H+ +FF +E N I LL +GV WP +V + E + P +G Sbjct: 546 ATEEDLVEAPDIGPISAGHIRSFFQQEHNLETIDALLNQGVSWPEVVVRSTETL--PLSG 603 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 +T V+TG L+ SRD+AK L LGAKV+GSVS KT V+AGE AGSKL KAQ+LG++V+ Sbjct: 604 QTAVVTGVLADYSRDEAKDLLTRLGAKVSGSVSAKTGFVVAGEKAGSKLTKAQDLGVKVL 663 Query: 661 DEAEMLRLL 669 DE +LL Sbjct: 664 DEDAFKQLL 672 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/662 (56%), Positives = 476/662 (71%), Gaps = 4/662 (0%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR+ L H Y Y+V+D P +PDAEYD+L REL+ LE HPEL+ DSPTQRVGA L AF Sbjct: 34 LRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFDSPTQRVGALALTAF 93 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 + H VPMLSL N F++E LAF+KRV + L + E+V + ELK DGLA+++ YE+GVL Sbjct: 94 PPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATELKFDGLAINLRYEDGVL 153 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARR 190 V AATRGDG TGE++T+N+RT+RAIPL+LH N P L+VRGEV + +A K+N R Sbjct: 154 VQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMMYKADLAKLNARQRD 213 Query: 191 TGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG 250 G K FANPRNAAAGSLRQLD RITA+R L FF YG+G+LEG ++P +H L + + G Sbjct: 214 AGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMPASHSALLDWYAELG 273 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 +PV + + +L FY E RP L ++IDGVV KVN + QQ QLGFV+RAPR+A Sbjct: 274 IPVCSERAVVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNRVDQQLQLGFVSRAPRFA 333 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A KFPA+E +T V+D+E QVGRTGAITPVARL PV V GV V+NATLHN DE+ R ++ Sbjct: 334 IAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTNATLHNEDEVRRKDIQ 393 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 IGD V++RRAGDVIP+VV V RP R + P+ CPVCGS + R+E EA+ARC+GG Sbjct: 394 IGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGSPIVRLEDEAIARCSGGW 453 Query: 431 I-CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 + C AQRK L HFVSRRAMDV+G+GD++++QLV+K + T ADL+KL L L+RM Sbjct: 454 VKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADLYKLGFRALAELDRMA 513 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 KSAQNV++ALEK+K TT ARF+YALGIR VGEATA LA +FG L+AL AS E+L +V Sbjct: 514 DKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHFGNLDALLQASPEQLLEV 573 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 D+G VVA+ + FF + N +I +L A GV WP +V N P AGKT VLTG+L Sbjct: 574 ADIGPVVAASITAFFTDAMNIELIEQLRAAGVTWPEHVVENRPR---PLAGKTFVLTGTL 630 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +SRD A ++ G KVAGSVSKKT V+AG AGSKLAKA+ELG+ ++DE +L+LL Sbjct: 631 PTLSRDAAAEKIEAAGGKVAGSVSKKTSYVVAGAEAGSKLAKAEELGVTILDETGLLQLL 690 Query: 670 GS 671 S Sbjct: 691 DS 692 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/668 (52%), Positives = 480/668 (71%), Gaps = 4/668 (0%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I++++ LR + H Y Y+V+ P IPD+ YD L EL++LE K+PE ITP SPTQRVG Sbjct: 10 IQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 69 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 A PL F + HE+PMLSLDNVFDE+ AF+KR++ RLK ++ + CE K+DG+A+S+ Sbjct: 70 AEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVALSL 129 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 LYENG L+ AATRGDG TGE++T N RTI ++PL+L G + P +E+RGEV +P+ GF K Sbjct: 130 LYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGFAK 189 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 N +A + G K FANPRNAA+GSLRQLDPRITAKRPL F+ Y +G+L+G + P H L Sbjct: 190 FNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCDVL 249 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 FK WG+PV + + E L +Y + + R + FDIDG+VIKVNSL Q +LGFV Sbjct: 250 KWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELGFV 309 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 +RAPRWA+A+KFPAQE+MT V+ +EFQVGRTGA+TPVARLEPV V+GV VSNATLHN DE Sbjct: 310 SRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNFDE 369 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 + R +R+GD V++RRAGDVIP+VV +L++RP+ + + P+ CPVC ++V + EGEAV Sbjct: 370 LYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGEAV 429 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 ARC GGL C AQ +ES+KHF SRRA+D++G+GDK+++ ++++ + +++L +T Sbjct: 430 ARCVGGLYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKSAIT 489 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 L RMG KSA+N++ A+EK+K+TT RFLYALGIR VG+ TA LA +F L+ L ASI Sbjct: 490 ALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMKASI 549 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 E LQ++ D+G V A ++H FF ++ N +I++L+ GVHWP + EI AGKT Sbjct: 550 ETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGVHWPQEKAVVKSEI----AGKTF 605 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 VLTG+L ++R++A+ ++ G K SVSK TD VI GE GSK KA+ LGI +IDE Sbjct: 606 VLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLIDEE 665 Query: 664 EMLRLLGS 671 L+LL S Sbjct: 666 AFLKLLKS 673 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/575 (57%), Positives = 420/575 (73%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 Q LR L Y Y+V D P +PDAEYDR+ R L++LE ++P+L+T DSPTQRVG P Sbjct: 10 QAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVGDVP 69 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 L AF Q++HEVPMLSLDN FD+E AF+KR+++RL +E + + E KLDGLAVS+LYE Sbjct: 70 LDAFEQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGLAVSLLYE 129 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 NG LV AATRGDG TGE+IT N RTIR++PLKL G ++P RLEVRGEV +P AGFE++N Sbjct: 130 NGELVRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHAGFEELNA 189 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + G K+FANPRNAAAGSLRQLD RITA RPL F+ Y + LEG E P TH L Sbjct: 190 RQQEAGLKLFANPRNAAAGSLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTHSAMLDAL 249 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + WGL V+ + +C E +L FY + E R L +DIDGVV KVN Q+ LGFV+RA Sbjct: 250 RDWGLRVNPEIRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQDDLGFVSRA 309 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWA+A KFPAQE++T + V++QVGRTGA+TPVARLEPVHV GV+VSNATLHN DEI+R Sbjct: 310 PRWAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATLHNIDEIQR 369 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 L +RIGD VV+ RAGDVIP+VV + RP + + + P+ CPVCGS++ R + VARC Sbjct: 370 LDIRIGDTVVVYRAGDVIPKVVRALPERRPANAQGIALPSSCPVCGSEILRGHDQVVARC 429 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 TGGLICG QR+E++KHF SRRAMD+DG+GDK++D LV++E + T ADL++L A ++ GLE Sbjct: 430 TGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLKAEQVAGLE 489 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 RMG KSA N++ ALE +K RFL+ALGI ++GE TA LA FG L+++ A + L Sbjct: 490 RMGEKSADNLIAALEASKTVGLGRFLFALGILQIGEETAKNLADCFGDLDSIRHAPLLLL 549 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 VPDVG+ VA + FFAE N VI LLA+GV Sbjct: 550 LAVPDVGLEVAKAIGAFFAESDNEAVIDGLLAQGV 584 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/79 (62%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Query: 592 EEIDS-PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 +E++S P G+T VLTG+L Q +R+ AK L +LGAKVAGSVSK T +V+AG +AGSKLA Sbjct: 689 QEMESQPLEGQTWVLTGTLEQFTRNQAKQALQQLGAKVAGSVSKNTRMVVAGASAGSKLA 748 Query: 651 KAQELGIEVIDEAEMLRLL 669 KA+ LGIEV DEA +L LL Sbjct: 749 KAESLGIEVCDEAALLSLL 767 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/686 (52%), Positives = 468/686 (68%), Gaps = 22/686 (3%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S+ +++ LR L H + Y+V+D P IPDAEYDRL +EL+ LE HPEL+TPDSPTQRV Sbjct: 19 SVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPELLTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLA--FNKRVQDRL---KNNEKVTWCCELKLD 117 G PL F+ +RH +PMLS+ D E+ A F+ RV+ L +++ V + ELK D Sbjct: 79 GGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESDPPVEYVAELKFD 138 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLA+S+ YENGVLV AATRGDG GED+T N+RTIR IPL+L + P +EVRGEV++ Sbjct: 139 GLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPPV-MEVRGEVYMR 197 Query: 178 QAGFEKINEDARRT------GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL- 230 + FE +NE R G K F NPRNAAAG +RQLDP A+R L+FF YGVG + Sbjct: 198 RDEFEALNERQREKIAKGAKGEKTFVNPRNAAAGGVRQLDPAFAAERRLSFFAYGVGEIT 257 Query: 231 ---EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 EGG + +TH L K W PV+ + L A E++AF+ + R L +DIDGV Sbjct: 258 PPEEGGPVFETHFELLQTLKSWCFPVAAQTRLAYGAPELIAFHEAIGRQRDQLPYDIDGV 317 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 V KVNSLA Q ++GFV+R PRWAVA K+PAQEQ+T V ++ QVGRTG +TPVA+L PV Sbjct: 318 VYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTGKLTPVAKLAPVF 377 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 V GV V+NATLHN DE R +R+GD V++RRAGDVIP+VV+V+L +R +D + P Sbjct: 378 VGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRVQDAPQFSMPRQ 437 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CPVCGSD R EGEA RCTGGL C AQRKE++ H+ +RA++++G+GDK+++QLV+ Sbjct: 438 CPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLGDKLVEQLVDTGV 497 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 + T DL++L L L+RM KSA N+V ALEK+K+TT RF++ LGIR VGEATA Sbjct: 498 IRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGLGIRHVGEATAKA 557 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP--A 585 LA +FG L+++ AS E+L +V DVG +VA + FF + NR V+ +L A GV W A Sbjct: 558 LARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQLRACGVTWEEGA 617 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 P + + P +GKT V+TG+L +SRDDAK R+ G KVAGSVSKKTD V+AG A Sbjct: 618 PAAVAPK----PLSGKTFVITGTLPGLSRDDAKDRIEAAGGKVAGSVSKKTDYVVAGLDA 673 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLGS 671 GSKL KA+ LG+ VIDEA +L LL S Sbjct: 674 GSKLVKAEALGVAVIDEATLLALLDS 699 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/662 (51%), Positives = 455/662 (68%), Gaps = 2/662 (0%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I +L LR T+R HEY Y+V++AP I D+E+D LM++LR LE I DSPTQRVG Sbjct: 8 IAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADSPTQRVG 67 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F + H + MLSLDNVF+ + F F +R+Q++L ++ E K DGLA+++ Sbjct: 68 GKADNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFDGLAINL 127 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG+L A+TRGDG TGED+T NVRTI IPL+L+ P +E+RGE+++P+ F Sbjct: 128 RYENGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMPKKAFYA 187 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE A G K+FANPRNAA+GSLRQLDPRITA+R L FF YG G + +LP+T+ L Sbjct: 188 LNEQAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPETYEALL 247 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 Q++ W +PV + E LA Y + + R L FDIDGVV KVN A Q++ GF+ Sbjct: 248 EQYRAWHIPVCSLHQKAATLPEALAAYQQFAKQREQLPFDIDGVVFKVNRFADQQRAGFL 307 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 ARAPRWA+A+KFPA E+ T + +E QVGRTGA+TPVARL+PV +AGV+V +A+LHNA E Sbjct: 308 ARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSASLHNARE 367 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I R +R+GD + IRRAGDVIP+VV+VVL +R D P HCPVC + + + E EAV Sbjct: 368 IARKDIRVGDTIFIRRAGDVIPEVVSVVLEKRLPDAPVFAMPEHCPVCAAAIVQNEDEAV 427 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 ARC+GGL C AQR +L HF SR A+D+ G+G+K+I QLV +E+V TPADLF LTA Sbjct: 428 ARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCLTADDWA 487 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 L RMG KSA NV+ A++ AK+TT ARF+YALGIR VG A LAA+FG L A AA Sbjct: 488 SLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGIRGVGSVNAQALAAHFGDLAAFMAADR 547 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 LQ++ +G VVA+ + +FFA+E NR VI+ ++A GVHW + + ID+P GKTV Sbjct: 548 AALQEIEGIGDVVAADIEHFFADEDNRAVIAAIVAAGVHWSTE--LTKKIIDAPLLGKTV 605 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TG+L +SR +A+ RL LGAKV VS++TD ++ G AGSKLA+AQ + +IDEA Sbjct: 606 VITGTLPSLSRAEAQKRLETLGAKVTSQVSRQTDFLLLGADAGSKLARAQAFSVPIIDEA 665 Query: 664 EM 665 ++ Sbjct: 666 QL 667 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/706 (51%), Positives = 472/706 (66%), Gaps = 47/706 (6%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR+TL+HH +LY+V+DAPE+PDAEYDRL +EL+ +E +P L T DSPTQRV F Sbjct: 41 LRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAMYPALRTADSPTQRVLGQVRDGF 100 Query: 71 SQIRHEVPMLSLDNVFDEESF--LAFNKRVQDRLK---NNEKVTWCCELKLDGLAVSILY 125 +RH VPMLS+ D E+ +AF+ RV+ L+ + +++ ELK DGLA+++ Y Sbjct: 101 VVVRHAVPMLSIRTETDTEASGAVAFDARVRRELELPDDAPPISYATELKFDGLAINLRY 160 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH------------------------- 160 E+GVLV AATRGDG +GED+T N+RTI IPL+L Sbjct: 161 EHGVLVQAATRGDGESGEDVTQNIRTIGQIPLRLRWAPTLGADAHSLPPEGARFALGRPG 220 Query: 161 GEN-----IPARLEVRGEVFLPQAGFEKINEDARR------TGGKVFANPRNAAAGSLRQ 209 GE PA LEVRGEV++ + FE +NE R G K F NPRNAAAG++RQ Sbjct: 221 GETGAPDLAPAVLEVRGEVYMRRDDFEALNERQRERIARGDKGEKTFVNPRNAAAGAVRQ 280 Query: 210 LDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAF 269 LDP I A+RPL+FF YG+G ++G LP TH G L GLPV + + A+ ++AF Sbjct: 281 LDPAIAAQRPLSFFAYGLGEVQGWALPHTHAGLLDALAAAGLPVCAERAVVQGADGLVAF 340 Query: 270 YHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEF 329 + ++ R +L FDIDGVV KV+SLA Q++LGFV R PRWAVA K+PAQEQMT + +E Sbjct: 341 HQRIGALRDSLAFDIDGVVYKVDSLALQQRLGFVTREPRWAVAHKYPAQEQMTRLLGIEI 400 Query: 330 QVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVN 389 QVGRTG +TPVARLEPV V G VSNATLHN DE R +R+GD V++RRAGDVIPQVV Sbjct: 401 QVGRTGKLTPVARLEPVFVGGTTVSNATLHNEDEARRKDVRVGDTVIVRRAGDVIPQVVG 460 Query: 390 VVLSERPEDTREVV-----FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV 444 VVL +RP+D E CPVCGS + R EGEA RCTGGL C AQRK+++ HF Sbjct: 461 VVLEQRPDDVGEPFDLYQRLGGRCPVCGSAIARPEGEADWRCTGGLFCAAQRKQAILHFA 520 Query: 445 SRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAK 504 SRR MD++G+GDK++DQLV+ + T +L+KL KLT LERMG KSA N+V ALEK+K Sbjct: 521 SRRMMDIEGLGDKLVDQLVDAGVIRTLPELYKLGVAKLTALERMGEKSAVNLVAALEKSK 580 Query: 505 ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 +TT ARFL++LGIR+VGEATA LA +FG L+ + AS+++LQ VPDVG +VA + FF Sbjct: 581 QTTLARFLFSLGIRQVGEATAKALARHFGALDRVMDASVDQLQAVPDVGPIVALSIRTFF 640 Query: 565 AEESNRNVISELLAEGVHWPAPIVINAEEIDS-PFAGKTVVLTGSLSQMSRDDAKARLVE 623 + NR V+ +L A G+HW A + P AGKT+VLTG+L + RD AK + Sbjct: 641 DQPHNREVVEQLRAAGIHWAEHEASAAADAAELPLAGKTLVLTGTLPTLGRDAAKDLIEA 700 Query: 624 LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 G KV+GSVSKKT V+AG AGSKL KA+ELG+ ++DEA +L LL Sbjct: 701 AGGKVSGSVSKKTHFVVAGAEAGSKLDKARELGLVILDEAGLLALL 746 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/728 (50%), Positives = 465/728 (63%), Gaps = 76/728 (10%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR L + Y+V+D PE+ DAEYDRL REL+++E +HP+ ITPDSPTQRVG F Sbjct: 21 LRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHPDFITPDSPTQRVGGEAADGF 80 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-------NNEKVTWCCELKLDGLAVSI 123 + + H+ PMLSL+N F +E AF+KRV D L E V + CELK DGLA+S+ Sbjct: 81 TPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAGTAEPVEYACELKFDGLAISL 140 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y +G AATRGDGTTGED+T NVRTI++IPL L G++ PA L+VRGEV + + F + Sbjct: 141 RYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKHPPALLDVRGEVLMYKRDFAR 200 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE R + FANPRNAAAGSLRQLD ++TA+RPL+FF YG+GVL+G +PDTH G L Sbjct: 201 LNERQRAAEQREFANPRNAAAGSLRQLDSKVTAQRPLSFFAYGIGVLDGAPMPDTHSGLL 260 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 ++ GLPV+ + + AE +L F+ KV E R L +DIDGVV KVN +Q++LGFV Sbjct: 261 DWYESLGLPVNRERAVVQGAEGLLDFFRKVGEKREALPYDIDGVVYKVNRRDEQDRLGFV 320 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 +RAPR+A+A KFPAQE T + +E QVGRTGAITPVARLEPV V G V+NATLHN DE Sbjct: 321 SRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVARLEPVFVGGATVTNATLHNEDE 380 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVN---------------------------------- 389 + R +R+GD V++RRAGDVIP+VV Sbjct: 381 VRRKDIRVGDTVIVRRAGDVIPEVVGRDGPHAMQVRVRFRGVRTVARRNRLRAAASSGRP 440 Query: 390 VVLSER---PEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICG------------- 433 + R P D R + C + S E VE E T +CG Sbjct: 441 MTWKPRLLKPTDRRGIRVRRGC-LRPSLFEFVEQEPFRMPTECPVCGSRIERLPDEAIAR 499 Query: 434 --------AQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 AQRK++L HF RRA+D+DG+G+KIIDQLVE+ V TPADLF L L L Sbjct: 500 CTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLFHLGFATLAAL 559 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 +R KSAQN++++LEKA+ TT ARF+YALGIR VGE+TA LA +FG L+ + ASI+ Sbjct: 560 DRFAEKSAQNLLDSLEKARHTTLARFIYALGIRHVGESTAKDLAKHFGALQPIMDASIDA 619 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW----PAPIVINAEEIDSPFAGK 601 L +V DVG VVA +H FFAEE NR VI++ L E V W PAP E AGK Sbjct: 620 LLEVNDVGPVVAESLHQFFAEEHNRTVIAQ-LREKVDWPEGPPAP-----REPQGVLAGK 673 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVVLTG+L +SRD+AKA L GAKV GSVSKKTD V+AG AGSKLAKA+ELGI V+D Sbjct: 674 TVVLTGTLPTLSRDEAKALLEAAGAKVTGSVSKKTDYVVAGAEAGSKLAKAEELGIPVLD 733 Query: 662 EAEMLRLL 669 E M +LL Sbjct: 734 EDGMHQLL 741 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/598 (55%), Positives = 423/598 (70%), Gaps = 25/598 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ +LRT L H Y Y+V+D P IPDAEYDRL REL+ LET++P+L+TPDSPTQR Sbjct: 5 QAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE----------KVTWC 111 V P +AF ++RHE+PMLSL N F+E+ L F++RV++ L + +V + Sbjct: 65 VSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVEYS 124 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 CE KLDGLAVS+LYE G LV ATRGDG+TGEDITSNVRTIR +PLKLHGE P LEVR Sbjct: 125 CEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVR 184 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEVF+ +AGFE +N A TGGK FANPRNAAAGSLRQLD +ITA RPL F YG G + Sbjct: 185 GEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQVS 244 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G LPDT +G L F+ WG+P+S + L + A+ +Y + R L ++IDGVV KV Sbjct: 245 G-TLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVVFKV 303 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 N +A Q +LGF AR PRWA+A KFPA+E++T + VEFQVGRTGA+TPVARL+PV VAGV Sbjct: 304 NRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVAGV 363 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VSNATLHN DE+ RLGLRIGD VVIRRAGDVIPQV+ VVL RP D + + P HCPVC Sbjct: 364 TVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHCPVC 423 Query: 412 GSDVERV-------------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458 GS VER EG A+ RC G L C AQ K+++ HFVSRRAMD+DG+GDKI Sbjct: 424 GSAVERTQLVKRSKGKESISEG-AIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKI 482 Query: 459 IDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIR 518 ++QLV++ V +PADL+ LT ++ LE S N++ A+ +++ + ARF++ALGI Sbjct: 483 VEQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFALGIP 542 Query: 519 EVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 +VGE TA LA G+LE + A E L +PDVG VA +HNFFA+E NR VI++L Sbjct: 543 DVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQL 600 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 9/176 (5%) Query: 499 ALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVAS 558 A E A + A F+ L I + A LA+ FG+L+ + A +L++V + A Sbjct: 616 AAEFAACASLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAK 675 Query: 559 HVHNFFAEESNRN----VISELLAEGVHWPAPIVINAEEIDS-PFAGKTVVLTGSLSQMS 613 + +FF E +N + ++L G+HW + + ++ P AG+T VLTG+L MS Sbjct: 676 SLRDFFDEPANVQRALAIEAQLREFGMHWQS----ERKAVEGLPLAGQTWVLTGTLEAMS 731 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 RD AK +L LGAKVAGSVS KT V+AG AGSKLAKA ELG++V+DE +L+L Sbjct: 732 RDVAKDKLEGLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKLF 787 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/663 (50%), Positives = 451/663 (68%), Gaps = 10/663 (1%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL L HH Y Y+V+D+PE+ DA+YD+LMREL++LE KHP L TPDSPTQRVG A Sbjct: 13 ELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQRVGGAAAEE 72 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F ++ H PM+SL N+F+++ F++R++ +L + + CE KLDGLA+++ YE G Sbjct: 73 FGEVVHRAPMISLANIFEDQGLTEFDERIR-KLVGLPGIAYVCEPKLDGLAIALRYEKGA 131 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAGFEKINE 186 V ATRGDGTTGED+TSN+RTIR++P+ L ++ +P LEVRGEVF+ + F+K+NE Sbjct: 132 FVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDDVKVPDVLEVRGEVFIRKKDFQKLNE 191 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 G +FANPRNAAAGSLRQLDPR+TA RPL+ F Y EG + TH+ +L Sbjct: 192 KREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPVFKTHIEKLEYL 251 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 K GLP+ ++ E E V Y + R L F++DG+V+KV+ Q+++LG V+++ Sbjct: 252 KTLGLPI-NQYRRAEGLEGVRQAYDASLKGRHELPFEVDGMVVKVDDEDQRKRLGQVSKS 310 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWAVA+KFP +E+ T V D+ QVGRTGA+TPVA L+PV V GV V+ ATLHN DE+ R Sbjct: 311 PRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARATLHNEDELRR 370 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 +R GD V +RRAGDVIP++V+VVLS+RP D+ FP HCPVC + + E A+ RC Sbjct: 371 KDVRKGDTVFVRRAGDVIPEIVSVVLSKRPADSAPFEFPKHCPVCDAVATKDEDGAIIRC 430 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 TG C AQ E ++HF SR AMD++G+GDK+ QLV V ADL+ LT L LE Sbjct: 431 TGA-SCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYALTKEDLLTLE 489 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 RMG KSA N++ +LE++K+TT RFLY+LGIR VG+ATA LA F E L AS+E++ Sbjct: 490 RMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEMLFEASLEDI 549 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLT 606 +V DVG ++A +H FF E N+ I LLA GV AP V PF GK+VVLT Sbjct: 550 SRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAPQVATG----GPFVGKSVVLT 605 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 G+++ M+R+ AK + G KVAGSVS+KTD V+AGE AGSKL KAQELG+ ++DE L Sbjct: 606 GAMTGMTREQAKEEVERRGGKVAGSVSRKTDFVVAGEDAGSKLKKAQELGVRILDEQAFL 665 Query: 667 RLL 669 ++L Sbjct: 666 QML 668 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/702 (49%), Positives = 462/702 (65%), Gaps = 38/702 (5%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +Q++ +LR + H+Y Y+V+D P I DAEYD L REL+ LE +P+L++ DSPTQR Sbjct: 9 EQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSDSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V F + H+ PMLSLDN F+ + + F++R++DRL V + E KLDG+++ Sbjct: 69 VAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRL-GVASVVYTGEPKLDGISL 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y++G LV A TRGDG TGED+T+NVRT+R++PL+L G+ P RLEVRGEV + + F Sbjct: 128 SLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIRKEDF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG--VLEGGELPDTH 239 E++N+ G + FANPRNAAAGSLRQLDPRITA+RPLT F +GVG + G E +H Sbjct: 188 ERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDPLALGVE---SH 244 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L WG + + E A+ ++ E+R L F+IDG V KV+ LA +EQ Sbjct: 245 WQVLECLAGWGFRTTAPLEHLEGVSACQAYRDRLIEERDALPFEIDGAVFKVDDLAVREQ 304 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LGF ARAPRWA+AFK PA+E T V + VGRTG ITP+ARL+PV V+GV V+ A+LH Sbjct: 305 LGFTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARASLH 364 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH---CPVCGSDVE 416 NADE+ R+ +R GD V++RRAGDVIPQ+ +VVL++RPE + F CP CGS V+ Sbjct: 365 NADELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGSAVQ 424 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R+EGEA RC GGL C AQR+ ++ HF SRRA+D+DG+G+KI++QLV K V ADLF+ Sbjct: 425 RIEGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLADLFR 484 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA-AYFG-- 533 L +L GLERMG KSA N++ AL++A+ TT ARFLYALGI VGE TA LA A +G Sbjct: 485 LGHAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIPHVGEVTARRLAEAAYGLM 544 Query: 534 -----------------------TLEAL---EAASIEELQKVPDVGIVVASHVHNFFAEE 567 T EAL AA ++L+ + DVG VVA + FFAE Sbjct: 545 VAVPRGDRAALRAAAGLDAQTAITSEALLRVMAAPADDLEAIEDVGPVVARAIAGFFAEP 604 Query: 568 SNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAK 627 NR V+ L A GVHWP P E S AG+ V+TG+L M+RD+AKA + G + Sbjct: 605 HNRQVVDHLCAAGVHWPEPDPPEQAESVSSLAGRAFVVTGTLETMTRDEAKAAIEACGGR 664 Query: 628 VAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 V GSVS+KTD ++AG AGSKL KA+ELG+EV++E+ + LL Sbjct: 665 VTGSVSRKTDYLVAGADAGSKLNKARELGVEVVNESGLRELL 706 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/671 (50%), Positives = 447/671 (66%), Gaps = 14/671 (2%) Query: 8 LTELRT---TLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +T++RT TL+ H Y Y+V+D P + D+EYD+L R L ELE ++P+L+ PDSP +VG Sbjct: 26 VTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLVQPDSPINQVGD 85 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSI 123 PL AF+Q+ H++PMLSL NVF+ F +RV DRL + + ELKLDGLAVS+ Sbjct: 86 MPLPAFTQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELKLDGLAVSL 145 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y +G A TRGDG TGEDIT N +TIR +PL L LEVRGEV +P+AGFE+ Sbjct: 146 KYVHGKFTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVLMPKAGFER 205 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV--GVLEGGELPDTHLG 241 +N A K FANPRNAAAGSLRQLDP + A RPL F+ Y V G+L + DT Sbjct: 206 LNRLAAEKEEKTFANPRNAAAGSLRQLDPSVAASRPLAFYAYSVNQGLL---DTIDTQSA 262 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K G VS V + + E +Y + R L F+IDG+VIKVNSLA Q+QLG Sbjct: 263 ALAWIKDIGFSVS-AVEVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSLALQQQLG 321 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F++R PRWA A+KFPA+ MT + +++QVGRTG ITPV +LEPV V GV VSN TLHN Sbjct: 322 FLSREPRWATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVSNVTLHNF 381 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 EI+RL +R GD V + RAGDVIP+V V +RPE++ V P+ CPVC S V + E Sbjct: 382 GEIQRLDVRAGDMVSVHRAGDVIPKVTRVWHEQRPENSEPVQLPSTCPVCDSPVVLPKDE 441 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ARCTGGL C AQ++E+L HFVSRRAMD+DG+G + E V T AD+++L + Sbjct: 442 ALARCTGGLFCPAQQQEALIHFVSRRAMDIDGLGASWLISFFEHGLVKTVADIYQLHNHQ 501 Query: 482 --LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L LE++G KS QN+++A+E +K TT +RF+YALGIR VGE TA LA FG L+AL Sbjct: 502 EELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGIRGVGETTAQNLAQQFGDLDALM 561 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 +ASIE+L PDVG + A + FF N VI+ L GVHW + +E + P Sbjct: 562 SASIEKLLLTPDVGAITAELAYKFFRAPHNIEVITALREAGVHWDKVEQVVSEGL--PLD 619 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G+T V+TG+L M+RD+AKA+L LGAKV+GS+S KT ++AG+ AGSK+AKA++LG++V Sbjct: 620 GQTWVITGALDSMARDEAKAKLQALGAKVSGSISAKTTALLAGDKAGSKMAKAEKLGVKV 679 Query: 660 IDEAEMLRLLG 670 + E E L L+G Sbjct: 680 VGEEEFLALVG 690 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/678 (45%), Positives = 456/678 (67%), Gaps = 16/678 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M S + ++ +LR L +EY YH ++ I DAEYD L R+L ELE K+ ELI DSPTQ Sbjct: 1 MTSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG+ L F +I+H PMLSL+N FD +L F KR++ + NNE +++CCELKLDG+A Sbjct: 61 KVGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +SI+YE G+ V AATRGDG GE+ITSN R I +IPLKL G +IP RLE+RGEVF+ ++ Sbjct: 121 ISIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSN 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG--VLEGGELPDT 238 F K+N+ + K F+NPRNAAAGSLR +DP ITA+R L F C+G V EL T Sbjct: 181 FIKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELT-T 239 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H RL++ WG+PV+ + +C S E++ FY K+ + R L FDIDG+VIKVNSL Q+ Sbjct: 240 HYQRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQK 299 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 ++G ++PRWA+AFKF +E++T + DV+FQVGRTG ITPVA PV+++GV++S A+L Sbjct: 300 KIGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASL 359 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD-VER 417 HN +EIERL L D + I R+GDVIP+++NV+ R ++ ++++FP+ CPVC ++ +E Sbjct: 360 HNKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLEN 419 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 +E E + RC GL C AQ+K++L HF S++++ V G+G KII++LVEK V P D F L Sbjct: 420 IE-EKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYL 478 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 L L+ +G + + ++N+++K K+TT F+YALGI VGE A +A YF L+ Sbjct: 479 KDIDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDK 538 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI--- 594 L ++I EL + VG ++++++ N+F+ SNR ++ +L+ + A I +N +EI Sbjct: 539 LMNSNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQ-----AGIFLNDQEIHKI 593 Query: 595 ---DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 + F K +VLTG SR + K L+ LGAK++ ++S+KTD +I G GSK + Sbjct: 594 NSEKTYFFNKKIVLTGVFKSFSRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSKFFR 653 Query: 652 AQELGIEVIDEAEMLRLL 669 A++L +++I++ E+ L+ Sbjct: 654 AKDLDVKIINQEELNSLI 671 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 323/664 (48%), Positives = 440/664 (66%), Gaps = 6/664 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L Y+ D+P + DAEYD +RELR LE ++P+ + DSPTQRVGAA Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ F ++ + +P+ SLDNVFD++ F + RVQ L E V E K DGL+V+I Y Sbjct: 70 PVEVFGEVHYAIPLTSLDNVFDQDGFSDWLARVQKGL-GREDVPLSAEPKFDGLSVNIRY 128 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 G LV A TRGDG TGED+T+NVRTIR +PL+L G++ P LEVRGEV +P A F ++N Sbjct: 129 IEGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAFRRLN 188 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + R G FANPRNAAAGSLRQLD +TAKRPL +F +G G L +H+ + + Sbjct: 189 GERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGE-SSVPLGKSHIAVMER 247 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 WG V+ + E ++ ++++ R + F+IDG+V KV+ L +EQLGF AR Sbjct: 248 LSAWGFEVTSYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFKVDDLLAREQLGFTAR 307 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KFPA E+ T V D+ VGRTG ITPVA L+PV V GV VS A+LHN DE++ Sbjct: 308 APRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLHNQDEVD 367 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R+GD V++RRAGDVIP+VV V+ ERP T+ P CPVCGS+V R+ E+ R Sbjct: 368 RKDIRVGDTVLVRRAGDVIPEVVMVIKEERPPATQPWHMPQRCPVCGSEVLRLANESAHR 427 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C GGL C AQR +++HF SRRAMD+ G+G+K+++QLV VHT AD++ L L GL Sbjct: 428 CMGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDEAALCGL 487 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 ERM +SAQ ++ +++++ T+ RFLYALGIR+VGE TA LA YFG L+ L AA+ E Sbjct: 488 ERMASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYFGDLDPLMAATPEL 547 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 LQ +PDVG +VA V +FFA+ NR+VI+ L A GV W + + F G T+VL Sbjct: 548 LQNIPDVGPIVAESVAHFFAQPHNRDVIAALRAAGVQW----AVVQPQKGGRFQGMTLVL 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L M+R++AK + G KV+GSVS KT V+ G+ GSK KA +LG++ + EA+ Sbjct: 604 TGALDNMTREEAKTAIENAGGKVSGSVSAKTSYVVVGKDPGSKAEKAAKLGVKQLTEAQF 663 Query: 666 LRLL 669 L + Sbjct: 664 LAMF 667 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 307/663 (46%), Positives = 432/663 (65%), Gaps = 8/663 (1%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + +L L YLYH +D P I D++YD+L R L++L +P+ +S RVG L Sbjct: 23 IDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRVGGEVL 82 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 A F I+H+ M SL NVF E F +++ + CE K+DGLA+SI Y+N Sbjct: 83 AGFETIKHKKKMTSLANVFSLEELRDFYDKIE------YDIELECEPKMDGLAISIFYKN 136 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G A TRGDG GE ++ NV+TIR +PLKL+ N P LEVRGE+ L + F +NE Sbjct: 137 GKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFLSLNEY 196 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLGRLLQF 246 + K FANPRNAAAGS+R LD ++ AKRPL + YG+G + P+T + Sbjct: 197 MQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFELMQLL 256 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + +G +SD + L ++ EV ++HK+ R L +DIDG+V KVN++ Q+ +G+ AR Sbjct: 257 QSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIGYTARG 316 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 P+WA+A+KFPA+E + V +VEFQVGRTGAITPVARL+PV V GV+VSNATLHN +EI+ Sbjct: 317 PKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNINEIKS 376 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 +R+GD+V++RRAGDVIP+VV + R D + V PT+CPVC S +E V +A+ RC Sbjct: 377 KDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEMPTNCPVCDSKIENVNDQAIYRC 436 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 TGG C AQ E LKHFVSR+AMD+D +G K+I+QLV + PAD++KL +LTGLE Sbjct: 437 TGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQLTGLE 496 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 RM KS+QNV++++ K+KE + ARF++A+GI+++GE ++ LA +FG+LE+ A EEL Sbjct: 497 RMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDAKFEEL 556 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLT 606 ++ VG ++A+++ +F+ + N ++ E LA G+ P+ + + F GKTVV+T Sbjct: 557 IEINYVGEIIANNIVSFWHDSLNIKIVEEFLAIGIKIQNPVKVE-HAYNESFTGKTVVIT 615 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 GS R + L +GAKV SVSKKTD+VI G+ AGSKL KAQELG+EVI E + Sbjct: 616 GSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGDNAGSKLTKAQELGVEVILEDNLK 675 Query: 667 RLL 669 LL Sbjct: 676 DLL 678 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust. Identities = 348/696 (50%), Positives = 449/696 (64%), Gaps = 33/696 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E ++L L + H+ LY+ DAP I DAEYD L R +E ++PEL+ DSP+ Sbjct: 22 LEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSPSH 81 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDG 118 RVGA P F ++ H+VPMLSL N FD+E F R++ LK + + E K+DG Sbjct: 82 RVGAQPADGFGKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKIDG 141 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+ ++ YE G V ATRGDG GE++T N++TI IP +L G+NIP +EVRGEV++ Sbjct: 142 LSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYMSH 201 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-D 237 F +NE R G VFANPRNAAAGSLRQLD +ITA RPL FF Y G E +LP D Sbjct: 202 EDFAALNERQREAGKPVFANPRNAAAGSLRQLDAKITASRPLRFFAYTWG--EMSDLPAD 259 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T G + F+KWG V+ C++ E ++ FYH +EE R TLG+DIDGVV KV+ L Q Sbjct: 260 TQSGVMDAFRKWGFTVNPLFGRCDTVEALIDFYHDIEERRATLGYDIDGVVYKVDRLDWQ 319 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LGFV+R+PRWA+A KFPA++ MT + +E QVGRTGA+TPVARL PV V GV+VSNAT Sbjct: 320 NRLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVVVSNAT 379 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNADEIERLG+R GD VV++RAGDVIPQ+V VV +RP ++ VFP CP CGS R Sbjct: 380 LHNADEIERLGVRPGDTVVVQRAGDVIPQIVRVV-EDRPRGKKKFVFPDTCPECGSHAVR 438 Query: 418 V------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + +AVARCTGGL+C AQ E L+HFVSR A D++G+G+K I E + P Sbjct: 439 EVNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGLIKKP 498 Query: 472 ADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 D+F L A KL E G SA+ + +A++ +E RF++ LGIR VGE A Sbjct: 499 DDIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVGETNA 558 Query: 526 AGLAAYFGTLEALE-----AASIE-----ELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 LA +GTL+ E AA E EL + VG V+A + +FFAE+ NR V+ Sbjct: 559 RLLARSYGTLDHFEEQMRAAADREDEAYAELLSIDGVGEVLAESIVDFFAEKHNREVLDG 618 Query: 576 LLAEGVHW-PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 L GV P P +E SP AGKTVV TGSL +M+R +AKAR +LGAKVAGSVS Sbjct: 619 LREAGVKGVPLP----KQETSSPVAGKTVVFTGSLEKMTRSEAKARAEQLGAKVAGSVSA 674 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KTD+++AG AGSKLAKA+ELGIE++DE + + L G Sbjct: 675 KTDILVAGADAGSKLAKARELGIEILDEDQWIELAG 710 >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 323/670 (48%), Positives = 440/670 (65%), Gaps = 8/670 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++Q++ ELR L Y YHV+D P + DAEYDR M+EL +LET++PE IT DSP+ R Sbjct: 4 EAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSPSVR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A L F ++ H+ PMLSL N F+E F++RV+ + + V + CELK+DGLAV Sbjct: 64 VGGAVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGI-DGVNVRYICELKIDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YE G + +TRGDG TGEDIT N++TI+AIPL+L E LEVRGE ++P+ F Sbjct: 123 SLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEE---VTLEVRGEAYMPKRSF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 K+NE+ + G VFANPRNAAAGSLRQLDP+I AKR L+ F YG+ +EG + +H Sbjct: 180 VKLNEEKEQNGEAVFANPRNAAAGSLRQLDPKIAAKRNLSMFVYGLADIEGKTIT-SHSE 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G + +CE+ EEV+A+ + +E RP L ++IDG+VIKV+ + QE+LG Sbjct: 239 ALDFLGELGFKTNPNRRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVTLQERLG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A++PRWA+A+KFPA+E +T + +E VGRTG +TP A LEPV VAG +V A+LHN Sbjct: 299 TTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +RIGD VV+++AGD+IP+VVNVV +R PTHCP C S + R+E E Sbjct: 359 DLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGLVRLEEE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C AQ +E L HFVSR AM++DG+G+++I QL E Y+ T ADL+ LT + Sbjct: 419 VALRCINP-ACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADLYGLTKDQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+R G KSA N+V A+E +KE + R L+ LGIR VG A LA +F T++ L A Sbjct: 478 LLQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFETMDNLVKA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA--EEIDSPFA 599 EEL+ + ++G +A + +F E ++I + GV+ + A + I S FA Sbjct: 538 GEEELKAINEIGEKMAQSIVTYFDNEDVLHLIQQFKDYGVNMTYKGIKRADLQNIASYFA 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTG L M R +AK ++ LG KV GSVSK TDLVIAGEAAGSKLA+A++ IE+ Sbjct: 598 GKTVVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVIAGEAAGSKLAQAEKHNIEI 657 Query: 660 IDEAEMLRLL 669 +E L+ L Sbjct: 658 WNEERFLQEL 667 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust. Identities = 320/674 (47%), Positives = 449/674 (66%), Gaps = 13/674 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES + + +L+ + +H Y+ +D PEI DAEYD L++EL LE + P+ +T DSP++R Sbjct: 5 ESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSPSRR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GAAPL+ F+ H PMLSL N F EE L F++R++ L ++E++++ E K+DG+AV Sbjct: 65 IGAAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDGVAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG---ENIPARLEVRGEVFLPQ 178 +++Y +GVL + ATRGDG GED+T N+RT+ IPLK+ E +P ++E+RGE+++ Sbjct: 125 NLIYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIYMET 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 A F K+NE G FANPRNAAAGSLRQLD ITA+RPL FCY VG++ G Sbjct: 185 AAFRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRGRAF-TY 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H L KKWG V+ + E E+ + FY ++++ R L ++IDG+VIKV+ L+ Q Sbjct: 244 HHDVLHALKKWGFSVNPFIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLSLQT 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG V+R+PRWAVA KF A + T +RD+ VGRTG +TPVA + PV V GV VS ATL Sbjct: 304 RLGAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSRATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDVE 416 HN DEI++ +RIGD V+++RAGDVIP+VV V++S R RE+ F P CP CGS+V Sbjct: 364 HNQDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIVSNR--SGREIPFKIPDTCPECGSEVV 421 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R+ GEA RC GL C AQ + ++HFVSR MD++G+GDK++ QLV ++ +H PADL+ Sbjct: 422 RLAGEAAHRCI-GLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHDPADLYY 480 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 L+ L LERM KS N+++A+E +K + + ++ALGIR VGE + LA F TL+ Sbjct: 481 LSHDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILARRFRTLD 540 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL + EL + D+G V+S + FF SNR VI +L GV +P+ + + Sbjct: 541 ALINTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGV---SPLETISPR-SA 596 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 P GKT V TG+LS+M+RD+AK + LG + AG+V+KKTD V+AGEAAGSKL KAQ+ G Sbjct: 597 PLTGKTFVFTGALSRMTRDEAKQIVESLGGQAAGTVTKKTDYVVAGEAAGSKLQKAQKAG 656 Query: 657 IEVIDEAEMLRLLG 670 I ++ E E LRL G Sbjct: 657 IAILSEEEFLRLAG 670 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust. Identities = 343/724 (47%), Positives = 445/724 (61%), Gaps = 63/724 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L + H+ LY APEI DAEYDRL L LE P LITP+SP+Q Sbjct: 62 EDAKDEHDALAAEIARHDLLYQDA-APEISDAEYDRLRLRLNALEAAFPSLITPESPSQT 120 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 VGA P F+++RH V MLSL NVF +E F RV+ LK +E + E+K+DGL Sbjct: 121 VGATPSEKFAKVRHTVRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKIDGL 180 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +VS+ YENG L AATRGDG+ GED+T+NVRTI IP + ++PA EVRGEV++ A Sbjct: 181 SVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYMSHA 240 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GE---L 235 F+ +NE GG++FANPRNAAAGSLRQLDP ITA RPL FF +G G + G GE L Sbjct: 241 DFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEASAL 300 Query: 236 P-DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 P DT+ G L WG P+ V +C S EE+LA Y +E R +LG+DIDGVV KVN L Sbjct: 301 PADTNFGVLQAIHGWGFPLPP-VEICRSVEEMLAVYRAIEMKRASLGYDIDGVVYKVNRL 359 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 QE+LGF++R PRWA A KF A++ T + ++ QVGRTGA+TPVA+L PV V GV+V Sbjct: 360 DLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGGVVVQ 419 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 NATLHN DEI R +RIGD V+++RAGDVIPQ++ VL +RP D E VFPT CPVCGS Sbjct: 420 NATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPVCGSH 479 Query: 415 VERV------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 R + +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K I ++ + Sbjct: 480 AVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFDEGRI 539 Query: 469 HTPADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 PAD+F + A KL+ E G +SA N+ A+E + + RF++ALGIR VGE Sbjct: 540 KAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGIRHVGE 599 Query: 523 ATAAGLAAYFGTLEALEAASIE--------------------------------ELQKVP 550 TA LA FG+L+AL AA E +L ++ Sbjct: 600 TTAKLLAKTFGSLDALRAAMAEPDAAELRPGDELLLESASGEDKRSLHRAIILAKLNEID 659 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA---EEIDSPFAGKTVVLTG 607 +G VVA + +FF E NR + L E + I A +++ S AG TVV TG Sbjct: 660 GIGDVVAQSIVDFFDEPHNREAVDALRRE-------LTIEAYKPDQVSSLLAGATVVFTG 712 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 L + +RD+AKA+ GAKVAGSVSK T ++AG AGSKL KA++LG++V+ E E L Sbjct: 713 KLERFTRDEAKAQAERFGAKVAGSVSKATTYLVAGPGAGSKLKKAEDLGVKVMTEDEWLE 772 Query: 668 LLGS 671 ++ S Sbjct: 773 MISS 776 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 605 bits (1559), Expect = e-171, Method: Compositional matrix adjust. Identities = 320/653 (49%), Positives = 415/653 (63%), Gaps = 73/653 (11%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q++ L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQ Sbjct: 38 MNPTAQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQ 97 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDN---------VFDEESFLAFNKRVQDRLKNNEKVTWC 111 RVG PLA F ++RHEVPMLSL N VFD AF++RV L N EK + Sbjct: 98 RVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGL-NGEKPEYV 156 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY +GVL AATRGDGTTGED+T NV+T+ IPL+LHGENIP +E+R Sbjct: 157 IEPKFDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIR 216 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQLD RITA+R L FF Y + + Sbjct: 217 GEVLMLKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQ 276 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 GG + + HL L K+ G + D C + +EVLAFY ++++ RPTL ++IDG+V+K Sbjct: 277 GGFIAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVK 336 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VNSLAQQE+LGF++RAPRWA+A KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V G Sbjct: 337 VNSLAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGG 396 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP-EDTREVV------ 403 V V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP ++T+ V Sbjct: 397 VTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQD 456 Query: 404 --------------------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHF 443 PTHCP+C S++ER EGEAVARC+GG++C AQR + L HF Sbjct: 457 DLFAETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHF 516 Query: 444 VSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL----------TAGKLTGLE------- 486 SR+AMD+DG+G K I+QLV ++ V ADL++L TA K + E Sbjct: 517 ASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASANEEEPSNSE 576 Query: 487 ------------------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 + K A+N++ +E +K ARFL+ALGIR VGE TA L Sbjct: 577 IEDFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKTL 636 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 A FGTLE + A L +PD+G VVA + +FFA+++ + +I ELLA GV Sbjct: 637 AQAFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGV 689 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 14/101 (13%) Query: 559 HVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAK 618 ++ FFA+ + N+ E +++G I+ AGKT VLTG+L + RD A+ Sbjct: 762 NMKTFFAQ-TRSNLQDETISDG-------------INEAVAGKTFVLTGTLPTLKRDQAQ 807 Query: 619 ARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 A + G KV+GSVSKKTD V+AGEAAGSKL KAQ LG+ V Sbjct: 808 AMIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKAQTLGVAV 848 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust. Identities = 322/671 (47%), Positives = 444/671 (66%), Gaps = 13/671 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +Q +LR LR+HE+ Y+V+D PEI DA+YD +M EL+ LE KHPEL+TPDSPTQRVG Sbjct: 9 KQAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQRVGGK 68 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P F ++ H PMLSLDN ++EE + +RV++ L ++ + CELKLDGL++++ Y Sbjct: 69 PREGFVKVAHSAPMLSLDNAYNEEELRDWARRVEE-LSGKAEIEYECELKLDGLSMALRY 127 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPL-----KLHGENIPARLEVRGEVFLPQAG 180 ++ V A TRGDG+ GED+T N+RT++++PL L ++ EVRGEV P Sbjct: 128 QDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEVRGEVIFPTKS 187 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEK+NED + G FANPRNAAAG++R L+P ITA+R L F+ Y + +++G D Sbjct: 188 FEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFL-LVDGRVHIDRQS 246 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L +K G V+ + +S ++VL F HK EEDR L ++IDGVVIKVNS A ++L Sbjct: 247 EALDTLEKLGFKVNSNRAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVIKVNSTALWQRL 306 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF +APRWA+A+K+ A+ +T V D+ QVGRTG +TPVA L+PV + G VS ATLHN Sbjct: 307 GFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIGGTTVSRATLHN 366 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVE 419 DEI+RLGL IGD V + R GDVIP+VV V+ + P ++ P CP CG V R E Sbjct: 367 MDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERCPECGGHVVRTE 426 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GEA RC C A+ +ES+ HF SR M+++GMGD +++QLV++ V AD+++L Sbjct: 427 GEADHRCVNA-NCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVKNVADIYELDE 485 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 KL LERMG KSAQN+++ ++ K+ R +Y LGIR VGE TA LA +FG+L+ + Sbjct: 486 EKLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGIRMVGERTAQFLAEHFGSLDGVM 545 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A+ EEL +V +VG +A +H FFAE SNR ++ L A G+ + +E + A Sbjct: 546 KATEEELLEVEEVGPRIAQSIHEFFAEPSNRELVKRLEAAGLQFKGV----KKERGTALA 601 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G+T VLTGSL SRD+AK + + G KV+GSVSKKT+ V+AGE AGSKL KA++LG+ V Sbjct: 602 GQTFVLTGSLPTYSRDEAKKLIEDAGGKVSGSVSKKTNYVVAGEEAGSKLDKARDLGVAV 661 Query: 660 IDEAEMLRLLG 670 IDE + +LLG Sbjct: 662 IDEDALKKLLG 672 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 313/669 (46%), Positives = 439/669 (65%), Gaps = 12/669 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 IE+++ ELR L +H + Y+V DAPEI D EYD L REL +LE + P+LITPDSPTQR+G Sbjct: 3 IEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRIG 62 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 PL F ++ H V M SL +VF E LAF++RV++ + ++ V + E K+DGL+VS+ Sbjct: 63 GKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVGDD--VEYVVEKKIDGLSVSL 120 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +YENGV ATRGDG GED+T N++TIR IPL+L ++P LEVRGEVF+ + F K Sbjct: 121 VYENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLK-RDLPL-LEVRGEVFISKKDFIK 178 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 INE+ G ++FANPRNAAAGSLRQLDP++T++R L F + + +EG TH L Sbjct: 179 INEEQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEGQSFK-THSETL 237 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 K+ G S +C+ V +++ E+R + F+IDG V+KVNSL Q+E LG Sbjct: 238 EFLKELGFKTSPGYKVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGST 297 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 +APRWAVA+K+PA+ + T V+ + VGRTG +TP+A +PV +AG VS ATLHN D Sbjct: 298 IKAPRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMDY 357 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I+ +RIGD V IR+AGD+IP+VV+VV +R + E P CPVCG+DV R EGEA Sbjct: 358 IKEKDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEAA 417 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK-- 481 RCT G+ C AQ + HF SR AM+++G+G II+ L+EK + ADL+ L K Sbjct: 418 YRCT-GIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKET 476 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L +ERMG KS +N++ ++EK+K+ R ++ GIR +G A L+ F +L+AL A Sbjct: 477 LVNIERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMNA 536 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI-DSPFAG 600 S E++ +P+ G +A V FF ++ NR+ + +L A GV+ + ++I D+ F G Sbjct: 537 SAEDIMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVN---TVSFGKKKIKDNRFEG 593 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT VLTG+L +R +A+ + G K +GSVSKKTD V+AGE AGSKL KA+ELGIE+I Sbjct: 594 KTFVLTGTLPSFTRKEAEEIIKSFGGKTSGSVSKKTDYVLAGEDAGSKLQKAKELGIEII 653 Query: 661 DEAEMLRLL 669 DE + +++ Sbjct: 654 DEDKFRKMI 662 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 319/668 (47%), Positives = 422/668 (63%), Gaps = 4/668 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++++T LR L H +LY++ DAPEI DAEYDRL REL ELE HP+L P SPT RVGA Sbjct: 11 KERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPASPTARVGA 70 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 P + + +PMLS+ N F +E F++RV+ L+ + VT+ E KLDG AV ++ Sbjct: 71 PPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLDGTAVELV 130 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPA--RLEVRGEVFLPQAGFE 182 YE G LV AATRGDG TGE IT N RTI ++PL L G+ +P LEVRGEV + + GFE Sbjct: 131 YEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVVMTKEGFE 190 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N +FAN RNAAAGSLRQLD R+TA RPLT YG+G + T Sbjct: 191 KLNALRLERDEPLFANARNAAAGSLRQLDSRVTASRPLTLIAYGIGRFSEIDAISTQHEI 250 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + +G + V + V+ FY +E RP+L +DIDG+V+KV+ L Q LG Sbjct: 251 VTRLADFGFKTNSHVRWDLDIKGVIDFYRFLEGIRPSLPYDIDGMVVKVDRLDFQRTLGA 310 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +R+PRW +A+KF A ++ T + ++ QVGRTGA+TPVA LEPV + GV VS ATLHN D Sbjct: 311 TSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVSRATLHNED 370 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 EI R +R+GD V+++RAGDVIP+VV V+ R + P CPVCG+ V R EA Sbjct: 371 EIARKDIRVGDAVLVQRAGDVIPEVVQVITGRRTGNETPFQMPATCPVCGTPVVREPSEA 430 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 V RC C AQ KE +KHF ++ A D+DG+GDK++DQLV++ + + ADLF L L Sbjct: 431 VTRCVNA-ACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADLFTLRVEDL 489 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL-EAA 541 L+RMG KSAQN+V A+EK++ TF FLY LG+R VG A LA F ++ L EAA Sbjct: 490 ESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGMRHVGAHVATLLARAFPGIDQLAEAA 549 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +L + +G V+A V NFF+ NR + L+ GV P A + P AGK Sbjct: 550 LAGQLNSIDGIGGVIAESVKNFFSNPENRQTVDSLINHGVALQFPEKEAATGHEMPLAGK 609 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T VLTG+L +M+RD A+ R+ G KV GSVS +TD V+AGEA GSK KA+ LG+ ++D Sbjct: 610 TFVLTGTLEKMTRDQARQRIEAAGGKVTGSVSSRTDYVVAGEAPGSKRDKAEALGVAILD 669 Query: 662 EAEMLRLL 669 EA +L LL Sbjct: 670 EAGLLSLL 677 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust. Identities = 329/673 (48%), Positives = 439/673 (65%), Gaps = 17/673 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ LR+ LR H Y Y+++DAP I DAEYDRL+REL LE + E + DSPT+ V Sbjct: 6 TLTARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTRTV 65 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P F+ H +LSL N F AF +R+ + L +++ E K+DGLAV+ Sbjct: 66 GAPPSQVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPAT-TLSFIVEPKVDGLAVN 124 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVFLPQA 179 + YE G L AATRGDGTTGED+T NVRTI IP +L G +P LEVRGE+++ + Sbjct: 125 LRYEQGSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSRE 184 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F +N G + FANPRNAAAGSLRQLD R+TA R L FF YG G+ GG + Sbjct: 185 AFAALNARQDAEGAQPFANPRNAAAGSLRQLDARVTASRRLGFFAYGAGL--GGRAIASS 242 Query: 240 LGRLLQ-FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 +LL+ +G V + + E +LA Y ++++ RP + ++IDGVV K++ A Q+ Sbjct: 243 QSQLLERLAGFGFAVQ-KTACADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQD 301 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 ++G VAR+PRWA+A KFPA+E T V+D+ +QVGRTG ITPVA +EPV V GV+VS ATL Sbjct: 302 RMGAVARSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATL 361 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV--FPTHCPVCGSDVE 416 HN DE++R + G +V++RRAGDVIP+VV V D + ++ P CPVCG+ + Sbjct: 362 HNIDELKRKQVYAGARVIVRRAGDVIPEVVRAV----DVDAQAMMPKAPAQCPVCGASLF 417 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R+EGE RC+GGL C AQ E L+HFVSR AMD++GMGDK+I +LV++ ++ ADL++ Sbjct: 418 RLEGEVAIRCSGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYE 477 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 L + MG K N+ ++E++K+ ARFL+ALGIR VG ATAA LA +F LE Sbjct: 478 FDYASLHEWQGMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAALATHFADLE 537 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 L A E L VPDVG VA + +FF E+ NR+VI LLA GV AP ++ D Sbjct: 538 LLMQADEEALLAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGVTPEAP---QQQQHDH 594 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 P AGKTVVLTGS + R A+ +L LG + +GSVSK+TDLVIAGE AGSKL KA+ELG Sbjct: 595 PLAGKTVVLTGSFVAIKRRTAQEQLRALGVRPSGSVSKQTDLVIAGEKAGSKLTKARELG 654 Query: 657 IEVIDEAEMLRLL 669 IEV DEA++L L Sbjct: 655 IEVADEAQLLSWL 667 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 323/679 (47%), Positives = 426/679 (62%), Gaps = 12/679 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q+ +LR L H LY+ +D PEI DAEYD L REL LET+ P L SPTQR Sbjct: 37 EEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQR 96 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L + H + M SLDN F + + AF +R+ + L + WC + K+DGLA+ Sbjct: 97 VGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPSAFWC-DPKMDGLAL 155 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YENGV SA TRG+G GE +T+ +RT+R +PL L G+++P R+EVRGEV + +A F Sbjct: 156 EVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADF 215 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG--VLEGGELP-DT 238 E++N GGK+FANPRNAAAGS+RQLD +TA RPL F YGVG VLEGG P T Sbjct: 216 EQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTT 275 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H G + + ++WG LC S +EV A+Y + R +L +IDGVV K++ QE Sbjct: 276 HSGLMARLREWGFDTPPEGRLCASPDEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQE 335 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LGF ARAPRWA+A KFPA + T + D+ QVGRTG +TPVA LEPV V GV VS ATL Sbjct: 336 ALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATL 395 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI GL +GD V+++RAGDVIP+VV ++ ER D R VFP +CP C S V R Sbjct: 396 HNEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDSPVVRP 455 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 +GE RC ++C A R++S+ HFVS+ +DV G+G++ + QLV+ +V +P LF LT Sbjct: 456 QGEVAHRCV-NVMCPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDGGHVTSPVGLFLLT 514 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKE-TTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 L ERMGP SA N V AL+ A+ T R + ALGIR VGE TA LAA F L+A Sbjct: 515 KLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQTARTLAANFTDLDA 574 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-----APIVINAE 592 L A E LQ++PD+G VA + +FFA E N ++ L A G+ WP P A+ Sbjct: 575 LREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGL-WPKRQDAPPASEGAD 633 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 I P G V+ TGSL+++ R +A+ GA +A SV+K DL++ G GSKL KA Sbjct: 634 AIVLPLQGLKVLFTGSLTRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKA 693 Query: 653 QELGIEVIDEAEMLRLLGS 671 ++LGI V++EA+ +L S Sbjct: 694 RKLGIRVMEEADFFAMLAS 712 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 325/673 (48%), Positives = 433/673 (64%), Gaps = 11/673 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S QQ+ LR ++RHHEYLY+V D PEI D +D LMR+L+ LE +HPELITPDSPTQRV Sbjct: 5 SAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P F+++ H PMLSLDNV EE + +RV+++ N ++ + CE KLDGL+++ Sbjct: 65 GGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEYKLDGLSMA 124 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPL-----KLHGENIPARLEVRGEVFLP 177 + Y +G L TRGDG GED+T+NVRTIR++PL KL +PA EVRGEV +P Sbjct: 125 LHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFEVRGEVVMP 184 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 FEK+NE+ G ANPRNAAAG++R L+P I A+R L F+ Y +G + Sbjct: 185 FTAFEKLNEEREAQGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYFALTEKGEDAFG 244 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L G V+ +S E V+ F ++ EE R LG++IDGVV+KVNS Q Sbjct: 245 EQEEALDALATLGFRVNQHRHAAKSIETVVEFVNRAEEHRSRLGYEIDGVVVKVNSAVLQ 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG+ RAPRWAVA+KF A+ +T V D++ QVGRTG +TPVA L PV V G V+ AT Sbjct: 305 RRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAPVQVGGTTVTRAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVE 416 LHNADEIERLGLRIGD V I R GDVIP+VV VV +E P T+ FP CP CGS+V Sbjct: 365 LHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHFPHACPACGSEVV 424 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GEA RC C A+ +ESL HF SR M+++GMG+ I+ QL+ + V T +D++ Sbjct: 425 RTPGEADYRCV-NTDCPARLRESLLHFASRGVMNIEGMGEAIVMQLLGRGLVKTVSDIYS 483 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT +L LERMG KSA ++ ++K+++ R L+ LGIR VGE TA LA +G+++ Sbjct: 484 LTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGIRFVGERTAQALAEEYGSMD 543 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL AS EEL++V DVG V+ + FF E NR+++ L G+ + + S Sbjct: 544 ALMQASREELERVNDVGPRVSEAIREFFDEPRNRDLVERLREAGLRFTG----EKRKKTS 599 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AG T VLTG+L +SRD+AK ++ G V+GSVSKKT+ V+AG AGSKL KA LG Sbjct: 600 QLAGLTFVLTGTLPGLSRDEAKGKIENAGGHVSGSVSKKTNYVVAGADAGSKLEKANSLG 659 Query: 657 IEVIDEAEMLRLL 669 + VIDEA ++++L Sbjct: 660 VPVIDEAALIKML 672 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 594 bits (1531), Expect = e-168, Method: Compositional matrix adjust. Identities = 315/645 (48%), Positives = 409/645 (63%), Gaps = 70/645 (10%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q + L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQRVG Sbjct: 28 QHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGE 87 Query: 66 PLAAFSQIRHEVPMLSLDN---------VFDEESFLAFNKRVQDRLKNNEKVTWCCELKL 116 PLA F+++RHEVPMLSL N VFD AF++RV+D L + E K Sbjct: 88 PLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNP-EYVIEPKF 146 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DGLA+S+LY +GVLV AATRGDGTTGED+T N++T+ IPL+LHGEN P +EVRGEV + Sbjct: 147 DGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLM 206 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 +A F +N+ G K FANPRNAAAGSLRQLD RITA+R L FF Y V + G + Sbjct: 207 LKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGFVA 266 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 + H+ L F+ G + + C ++ +EVLAFY +++ RP L ++IDG+V+KVNSLA Sbjct: 267 EEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSLA 326 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 QQ +LGF++RAPRWAVA KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V GV V+N Sbjct: 327 QQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTN 386 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP------------------- 396 ATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP Sbjct: 387 ATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDDL 446 Query: 397 -------EDTREVV------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHF 443 T+ V PTHCP+C S++ER EGEAVARC+GG++C AQR + L HF Sbjct: 447 FAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHF 506 Query: 444 VSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL----------TAGKL----------- 482 SR+AMD+DG+G+K I+QLV ++ V ADL++L TA K Sbjct: 507 ASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSEG 566 Query: 483 -----TGLERMGP-KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 +G + P K A+N++ +E +K ARFL+ALGIR VGE TA LA FGTLE Sbjct: 567 SSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAFGTLE 626 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 + A L +PD+G VVA + +FFA+ + +I ELLA GV Sbjct: 627 RVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGV 671 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/77 (59%), Positives = 57/77 (74%) Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I+ AGKT VLTG+L + RD A++ + G KV+GSVSKKTD V+AGEAAGSKL KA Sbjct: 765 INKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKAN 824 Query: 654 ELGIEVIDEAEMLRLLG 670 LG+ V+ EAE+L LLG Sbjct: 825 ALGVSVLSEAELLTLLG 841 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 312/671 (46%), Positives = 432/671 (64%), Gaps = 11/671 (1%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 T+L +R H+ Y+V P I D YDRL EL +LE K P+LIT DSP+QRV PL Sbjct: 11 TQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSPSQRVSGEPLK 70 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 F + H PM+SLDN + ++ F RVQ RL NE + W E K+DG+A+++ YE G Sbjct: 71 EFKPVHHLSPMMSLDNTYSQQDVRDFVGRVQ-RLLPNETLEWILEPKVDGVAINLKYEKG 129 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAI--PLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 V V ATRGDGTTG+D+TSN++TIR+I LK G +P +E+RGEV+LP+A F KIN Sbjct: 130 VFVCGATRGDGTTGDDVTSNLKTIRSIAGKLKASGRKLPDVVEIRGEVYLPKAAFTKINA 189 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + G + FANPRN+AAGSL+QLDPRI AKRPL YG+GV EG E P H L Sbjct: 190 ERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGAERPKEHDEVLAWL 249 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 K G ++ C SA+E++ +++++ R ++ DG VIK+NS A +E++GF ++A Sbjct: 250 KSAGCKTPEKTWKCCSADELIDAINELDQLRRKFTYETDGAVIKLNSFALRERIGFTSKA 309 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWA+A+K+ A++ T ++ + QVGRTGA+TPVA LEPV +AG +S ATLHN DE+ R Sbjct: 310 PRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGSTISRATLHNEDELRR 369 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE----- 421 +R+GD V I +AG+VIP VV VVL++R + FPTHCP CGS V R EG Sbjct: 370 KDIRVGDTVTIEKAGEVIPAVVGVVLTKRTGKEVQFQFPTHCPECGSKVARTEGTENGAA 429 Query: 422 -AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 V RC C AQ + ++H+ +R AMD++G G+ ++ QLV K V +DL+ LT Sbjct: 430 GVVWRCLNA-ACPAQIRGRIEHWCARGAMDIEGGGEALVSQLVTKGLVREVSDLYSLTLD 488 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 ++ GLERMG KSAQN ++ ++ +K R L+ LGI VG A L F TL+ + A Sbjct: 489 QVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILHVGAGVAKRLGRRFTTLDDIFA 548 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 AS E+L +V D+G V+A + + E NR +I L G+++ + + A + FAG Sbjct: 549 ASQEQLTEVEDIGEVIAHSIVQWHQEPKNRELIELLRKAGLNFNSELYKPAAALGH-FAG 607 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT VLTG+L + R++A A++ LG KV+GSVSKKTD ++AGE AGSKL KAQ+LG+++I Sbjct: 608 KTFVLTGTLPTLKREEAAAKIEALGGKVSGSVSKKTDYIVAGEDAGSKLEKAQKLGVKII 667 Query: 661 DEAEMLRLLGS 671 DEA L+L + Sbjct: 668 DEAAFLKLCAN 678 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 326/686 (47%), Positives = 439/686 (63%), Gaps = 18/686 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + +++ LR +R+H Y Y+V+D P I DAEYD LMRELR LE HPEL+TPDSPTQR Sbjct: 4 DHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F++++H VPMLSL N DE A+ RV L N+ +V + E K+DGLAV Sbjct: 64 VGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDGLAV 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL-------HGEN--------IPA 166 +++Y NG+LV ATRGDG TGED+T+N+RTI IPL+L G+ IP Sbjct: 124 TLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAVIPP 183 Query: 167 RLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYG 226 +EVRGEV++ A F ++NE +G KV ANPRNAAAGSLRQ DP ITA+RPL FF YG Sbjct: 184 LIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFFAYG 243 Query: 227 VGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDG 286 +G +EG ++ T L + G PV+ E ++ LA+ + R L +++DG Sbjct: 244 IGQIEGVQV-QTQWETLNLLRTLGFPVNRDARRFERLDDALAYCREWMTRRDELEYEVDG 302 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 VVIK++SLAQQ QLG V R PRWA+AFKFPA+E ++ + D+ VGRTG ITP A +EPV Sbjct: 303 VVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVIEPV 362 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 ++ GV V NA+LHNAD I +RIGD V+++RAGDVIP +V +++ R R P Sbjct: 363 NIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQMPA 422 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CP CG+ +ER EGE RC IC AQ ++HFVSR AMD+ G+G+K + VE+ Sbjct: 423 TCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFVERG 482 Query: 467 YVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 +V ADL+ LT +E GPK N+++A+ +K R + LGIR VGE A Sbjct: 483 WVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEVVAQ 542 Query: 527 GLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 LA +FG+L+AL AAS +E+ + +G +A+ V +FA ++ +I++L GV A Sbjct: 543 ILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGVRTEAQ 602 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD-LVIAGEAA 645 A ++ AGKT V+TG+L MSR++A A + G KV+GSVSKKTD LVI E Sbjct: 603 ETARASRGNA-LAGKTFVITGTLPSMSREEASALITAHGGKVSGSVSKKTDYLVIGAEPG 661 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLGS 671 G+K AKAQELGI +IDEA +L L+GS Sbjct: 662 GTKFAKAQELGIPMIDEAGLLALIGS 687 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust. Identities = 325/689 (47%), Positives = 428/689 (62%), Gaps = 27/689 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + ++ ++ LR + HH YLY+ DAPEI DA +D LMRELRELE +P+ I P SPTQ Sbjct: 16 VSDVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELANPQYIDPTSPTQ 75 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG FS +RH V M SLDN + + R + + V +CCELK+DG + Sbjct: 76 RVGGYVGEQFSPVRHAVRMYSLDNAMGLDELDEWLARTLEAI--GHPVQFCCELKIDGSS 133 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP------ARLEVRGEV 174 +++ YE GVL AATRGDGTTGED+T N+RT+R IPL+L + + A +EVRGEV Sbjct: 134 IALTYEAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDSDASIEVRGEV 193 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 ++P++ FEK+N A TG + FANPRNAAAGSLRQ DP+IT R L F Y + + Sbjct: 194 YMPKSSFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFLYAIA--DDAP 251 Query: 235 LPDTHLGRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + LL++ + G V+ V LC++ +EV F +V E R +L + IDGVV+KVN Sbjct: 252 IRAESQNDLLEWLRDCGFHVNPDVKLCDTPQEVHDFCEQVAEKRDSLPYGIDGVVVKVND 311 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 A Q +GF ARAPRWA+A+KFP +E+ T + D+ QVGRTGA TPVA L+PV V G V Sbjct: 312 FATQRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELDPVLVDGSTV 371 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 + ATLHN DE+ R +RIGD V++R+AGDVIP+++ VLS RPE + P CP CGS Sbjct: 372 ARATLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEMPATCPSCGS 431 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 + R EGEA RC + C AQ E L H+ SR AMD+DGMGD+I+ +LVE V AD Sbjct: 432 PLVREEGEAAFRCV-SIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVESGRVLDVAD 490 Query: 474 LFKLTAGKLTGLE-----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 + LT L LE +G A ++ +LE +K TFAR L+ LGIR VG+ Sbjct: 491 YYNLTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFGLGIRHVGK 550 Query: 523 ATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 T +AA + ++E L A+ E L +V +G V+A + F A E NR VI L GV Sbjct: 551 TTGEAIAAAYPSMEKLMNATEEGLAQVDGIGAVIAKSIVTFLATEDNREVIHRLERAGVT 610 Query: 583 WPAPIVINAEEIDSPFAGKTVVLTGSLSQ--MSRDDAKARLVELGAKVAGSVSKKTDLVI 640 + +I AG T VLTGSL++ M+R +A RL +GAKV+GSVSKKT V+ Sbjct: 611 MADE--VKESDIPQTLAGITFVLTGSLTESGMTRTEAGDRLKAMGAKVSGSVSKKTGYVV 668 Query: 641 AGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 AGEAAGSK KA +LG+ V+ EAE LRLL Sbjct: 669 AGEAAGSKYDKAVQLGVPVLTEAEFLRLL 697 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 339/779 (43%), Positives = 459/779 (58%), Gaps = 109/779 (13%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + +Q++ L TL + + Y+ +DAP +PDAEYDRL REL LE +HP+ P+SPTQ Sbjct: 1 MSTPQQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVF----------DEESFLAFNKRVQDRLKNNEKVTW 110 RVG A L F + H VPMLSL+N F D FLAF++RV L +V + Sbjct: 61 RVGGAVLDGFETVVHAVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKEL-GVAQVEY 119 Query: 111 CCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV 170 E K DGLAVS+LY+NG+LV AATRGDGTTGE++T N++T+R IPL+LHGE PA LEV Sbjct: 120 AAEPKFDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEV 179 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGEV + +A F +N+ G K FANPRNAAAGSLRQLD +ITA+R L FF YG+ L Sbjct: 180 RGEVLMLKADFAALNQRQLEAGQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQL 239 Query: 231 EGGE-LPDTHLGRLLQFKKWGLPVSD-RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVV 288 G E LP++H+ L + G + A VL Y ++ E RP L ++IDG+V Sbjct: 240 SGVERLPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGMV 299 Query: 289 IKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHV 348 +KVNSLA+Q+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTGA+TPVARL PV V Sbjct: 300 VKVNSLAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVFV 359 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV----- 403 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+L RP +++ Sbjct: 360 GGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQME 419 Query: 404 -------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GD Sbjct: 420 PLHEPFRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLGD 479 Query: 457 KIIDQLVEKEYVHTPADLFKLTAGKLTGLE---RMGPKSAQNVVNALEKAK--------- 504 K I+ LV + +H+ AD+++L KL ++ K AQN+++++ +++ Sbjct: 480 KQIEALVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFLF 539 Query: 505 --------ETTFARFLYALG---------------IREVGEATAAGLAAYF------GTL 535 E+T + A G + ++G A +A YF L Sbjct: 540 ALGIRHVGESTAKQLAAAFGNLDTVRRAPEPILACLPDIGSVVAHAIAHYFRQPAQQKML 599 Query: 536 EAL-----------------EAASIEELQKVPDVGIV---------VASHVH-------- 561 + L AA + LQ++P++ + +A +H Sbjct: 600 DDLLQHVAPQAAAPSPQTRANAAPEQWLQRLPNIKLSEKRAAELWQLAGSLHALQTDQAL 659 Query: 562 -----NFFAEESNRNVISELLAEGVHWPAPIVINAEEI----DSPFAGKTVVLTGSLSQM 612 N+ + ++ ++ E+ A P N + P AGKT VLTG+L + Sbjct: 660 PQEWQNWRRQPAHAALLQEITAFTEALPESSTDNVSGSLHPENHPIAGKTFVLTGTLPTL 719 Query: 613 SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 RD A A + G KV+GSVSKKTD V+AGEAAGSKL KAQ LG+ V+ E E+L +LG+ Sbjct: 720 KRDQAAALIEAAGGKVSGSVSKKTDFVVAGEAAGSKLEKAQALGVAVLSEEELLGMLGN 778 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 317/678 (46%), Positives = 426/678 (62%), Gaps = 12/678 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + I+++ LR L H YHV D P I D EYDR+M+ L +ET+ PEL TPDSPT+ Sbjct: 8 FDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELSTPDSPTR 67 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+GA L AF H +PM SLDN F ++ + F+ R ++ N + + E KLDG+A Sbjct: 68 RIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTA-KILNTSDIRYTVEPKLDGVA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVFLP 177 V + YE G L A TRGDGT GE IT N RTI ++PLKL IP LEVRGEV + Sbjct: 127 VELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLAPAGNGTIPDVLEVRGEVIIN 186 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG----VLEGG 233 FE +N+ TG +FANPRNAAAGSLRQLD R+TAKRPL F YGVG ++ Sbjct: 187 SKDFEGLNKKRLATGEPLFANPRNAAAGSLRQLDSRVTAKRPLEIFVYGVGRAQELMANF 246 Query: 234 ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 ++ +H L K+ G ++ + S EVL + E R L ++IDG+VIKV+ Sbjct: 247 DI-GSHSALLESLKRLGFRINPLIRSGLSLTEVLDRFKAFETMRQDLDYEIDGMVIKVDD 305 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 + QE+LG AR+PRWA+A+KFPA E+ T + D+ QVGRTG +TPVA LEPV++ GV+V Sbjct: 306 IVFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPVNIGGVMV 365 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 + A+LHN DEI+ +RI D V+++RAGDVIP+VV V + R R V PTHCPVC S Sbjct: 366 ARASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPTHCPVCHS 425 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 V R++ EA +C C AQ K+ LKHFVS+ D++G+G K+IDQLV++ V + AD Sbjct: 426 PVRRLDNEAAVKCINA-SCKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDRTLVGSFAD 484 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 LF L L ++RMG KSA N+V A+E++K RFL+ALG+ GE+ A L++ F Sbjct: 485 LFTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAAQLLSSTFF 544 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 TLEAL AS E L + VG A V FFA N+ I+ ++ GV V+ + Sbjct: 545 TLEALLKASAEALGAIEGVGPKTADSVVAFFANPDNQETIARMMENGVVIENHTVVESAA 604 Query: 594 IDSP--FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 +D+ F+ K VVLTG+L ++R +AK RL E GA+V SVSK TD+++AGEA+GSKL K Sbjct: 605 LDNATFFSEKRVVLTGTLGTLTRSEAKQRLEEQGARVVSSVSKNTDILVAGEASGSKLVK 664 Query: 652 AQELGIEVIDEAEMLRLL 669 A+ LG+ ++DE L L Sbjct: 665 ARSLGVTIMDEQTFLEHL 682 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 300/668 (44%), Positives = 428/668 (64%), Gaps = 8/668 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I ++L LR +R H+YLY+V PEI D EYDRLM++L +E PEL+TPDSPTQRVG Sbjct: 8 ILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRVG 67 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 P+ Q+ H PMLS++N + E F +R L + E V W ELK+DG+A+S+ Sbjct: 68 EEPMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSL-DGEAVEWVVELKVDGVAISV 126 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG+LV A TRG+G G+D+T NVRTI +PL+L+G+ IPA LEVRGEV++ + Sbjct: 127 RYENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDLVL 186 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +N+ + G +++AN RN A+G++R LDP++ A+R L +GVGV EG + H+ L Sbjct: 187 LNKRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEG-MTAENHMQFL 245 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 Q GLP + + E + + ++ E L F++DG+V+KVN Q+ +LG Sbjct: 246 EQVSSLGLPPTPHCKCFATFSEAVKYCEEIPERLHELDFEVDGLVLKVNRFDQRAKLGQR 305 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 +++PRW +A+KF E T + + QVG+TGAITPVA LEPV +AG VS A+LHNADE Sbjct: 306 SKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLHNADE 365 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I R +RIGD VV+ +AG +IP +V V +ER D FPTHCPVCGSDV + EG Sbjct: 366 IVRKDIRIGDIVVVEKAGKIIPHIVRVEAAERTTDLPVFQFPTHCPVCGSDVAKDEGGVY 425 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 RCT C AQ +E L+ F +R AMD++G+GDK++DQLV + V DL++LT KLT Sbjct: 426 IRCTNP-SCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRLTLDKLT 484 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 LERMG KSA ++ + +K +R L L IR +G + LA +FGTL+A+ A++ Sbjct: 485 SLERMGEKSATKLLEGIVASKSRPLSRLLNGLSIRHIGSNGSQVLARHFGTLDAIRQATL 544 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW--PAPIVINAEEIDSPFAGK 601 E+L +V +VG + A+ V+ F + + I +L+A G++ P + E I FAGK Sbjct: 545 EDLSRVSEVGEITAASVYEFLHSDYGKTTIDDLVALGLNTQEPKSAIPTGEGI---FAGK 601 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V+TG+LS+ SRD+ + + + G K + SVSKKTD ++AG AGSKLAKA+ LG++++ Sbjct: 602 TFVVTGTLSKFSRDEVEDLIEKHGGKASSSVSKKTDYLLAGAEAGSKLAKAESLGVKILS 661 Query: 662 EAEMLRLL 669 EA+ + LL Sbjct: 662 EADFIALL 669 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust. Identities = 323/664 (48%), Positives = 441/664 (66%), Gaps = 6/664 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q++ ELR +R H+Y Y+V+DAPEI DAEYDRLMREL +LE HPEL+T DSP+QRVG Sbjct: 15 QRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQRVGGQ 74 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 PLAAF + H VP+LSL N D++ F++R + + + +T+ E K+DGL V + Y Sbjct: 75 PLAAFRAVSHRVPLLSLANAVDDQDLREFDRRAR--ERADRPLTYVVEPKIDGLTVVLSY 132 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 E G + AATRGDG GEDIT N++T+RA+PL+L +I + LEVRGE +LP+A F ++N Sbjct: 133 EEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLK-RDIKS-LEVRGEAYLPKAAFARLN 190 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E+ G FANPRNAAAGSLRQLDP++TA RPL + Y + LEG + + L Sbjct: 191 EEREEAGEAAFANPRNAAAGSLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEALQM 250 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 + GLPV+ C + ++V+ + E R L ++IDG+V+KVN L Q LG A+ Sbjct: 251 LEDLGLPVNPERRYCRTIDDVIDYCRYWTEHRHDLPYEIDGMVVKVNELDQYPLLGETAK 310 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 +PR+A+AFKFP ++ +T VRD+ +VGRTG ITP A LEPV +AG VS ATLHN D I Sbjct: 311 SPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRATLHNEDIIR 370 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 + IGD VVI++AGD+IP+V++V+ +R + R P CP C S V R++GEA R Sbjct: 371 ERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVSRLKGEAAIR 430 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 CT L C AQ KE L HF SR AM+++G+G +++ L E V PADL+ LTA ++ L Sbjct: 431 CT-SLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLYDLTAEQVAPL 489 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 ERMG KSA N++ A+E +K A ++ALGIR VG+ A LA +FG+++ L A+ EE Sbjct: 490 ERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSMDQLMKATTEE 549 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 LQ V ++G +A + +FA +NR +I L +G+ +A + FAGKTVVL Sbjct: 550 LQAVSEIGPKMAESLQRWFAVPANRQMIDRLAEKGLQMETEKAGDA-GVPQTFAGKTVVL 608 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L+ + R +A+ L E GAKVA SVSKKT LVIAGEAAGSKL KA+EL I ++ EA+ Sbjct: 609 TGTLTTLDRREAQRLLEERGAKVASSVSKKTSLVIAGEAAGSKLEKAKELNIPILSEADF 668 Query: 666 LRLL 669 L+L+ Sbjct: 669 LQLI 672 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 333/714 (46%), Positives = 435/714 (60%), Gaps = 58/714 (8%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L + H+ Y+ DAP I DA+YDRL R ++E + P L DS +++VGAAP A F Sbjct: 30 LSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDSLSRKVGAAPSAKF 89 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYENG 128 +++ H+VPMLSL N F +E F RV+ L + ++ + E K+DGL+ S+ YE G Sbjct: 90 AKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPKIDGLSCSLRYEGG 149 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 VLV AATRGDGT GED+T+NVRTI IP +L G +P +++RGEV++ +A F +N Sbjct: 150 VLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVYMGKADFLALNARQ 209 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKK 248 G VFANPRNAAAGSLRQLDP IT RPL FF Y G E G + + F++ Sbjct: 210 EEAGKPVFANPRNAAAGSLRQLDPEITRSRPLRFFAYAWGQAEPGPPGASQHEVVDAFRR 269 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 +GLP + A +LA Y K+ +R +LG+DIDGVV KV+SLA QE+LGFV+R+PR Sbjct: 270 FGLPTNPLTIRVTDAAGLLAHYRKIGAERASLGYDIDGVVYKVDSLALQERLGFVSRSPR 329 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 WA+A KF A++ T + +E QVGRTGA+TPVA+L PV V GV+VSNATLHN D I +G Sbjct: 330 WAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVVSNATLHNEDYIRAIG 389 Query: 369 -----------LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS---- 413 +R+GD VV++RAGDVIPQVV+VVL +RP FP HCPVC S Sbjct: 390 GNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAYQFPHHCPVCNSQAVR 449 Query: 414 --DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 D + + +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K E + + P Sbjct: 450 EVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEKQAHAFYEWKLIAEP 509 Query: 472 ADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 AD+F+L A KL E G SAQN+ A+E + RF++ALGIR VGE A Sbjct: 510 ADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIEARRTIALDRFIFALGIRHVGETNA 569 Query: 526 AGLAAYFGTLEALEAASI-----------------------------EELQKVPDVGIVV 556 LA ++G++EAL A+I +E+ + +G VV Sbjct: 570 KRLARHYGSVEALRDAAIGAEMPTEMEEASEETPPTRRRKPQGNEVWQEMTDIDGIGAVV 629 Query: 557 ASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDD 616 A V FF E NR V+ ELL E P V + SP +GKTVV TGSL +M+RD+ Sbjct: 630 AEAVVEFFREPHNRQVVEELLKEVTPQPLEAVAST----SPVSGKTVVFTGSLERMTRDE 685 Query: 617 AKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 AKA LGAKVAGSVS KTDL++AG AGSKL KA+ LG++ I E E L+G Sbjct: 686 AKAMAERLGAKVAGSVSGKTDLLVAGPGAGSKLEKARSLGVKTITEDEWFDLVG 739 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 303/656 (46%), Positives = 410/656 (62%), Gaps = 79/656 (12%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR + + ++ Y+ + PEI DA+YD+L REL+ELE K+PEL+T DSP+ RVG A + Sbjct: 11 ELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVGGAVRKS 70 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F ++RH +PMLSL N FDE F R+ R+ ++ + + E K DGLA+S+ YE G Sbjct: 71 FVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGLAISLRYELGK 130 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 V TRGDG GED++ N+RTIR++PLKL G N+PA LEVRGEV++P+ GF + N+ A Sbjct: 131 FVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRDGFSEFNKRAM 190 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-----GGELP----DTHL 240 G K+ ANPRN AAGSLRQLD RI+A+RPL+FF YGVG+++ E+P TH Sbjct: 191 ARGEKLLANPRNGAAGSLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEEIPQSIASTHS 250 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q + WG PVS V + + ++ +LA+Y ++ E R L FDIDGVV K++ LA Q ++ Sbjct: 251 AMLAQLRAWGFPVSSLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYKLDDLAGQREM 310 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+RAPRWA+A KFPAQEQ T V +E Q+GRTGA TPVARL+PVHVAGV+V+NATLHN Sbjct: 311 GFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVTNATLHN 370 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 AD+I RL +R+GD V++RRAGDVIP+V VV +RP T+ PT CPVCGS++ R EG Sbjct: 371 ADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPATQSWQMPTQCPVCGSEIVREEG 430 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII--------------------D 460 +AV RC+G L C AQRKE+ +HFVSRRAMDVDG+G+K I D Sbjct: 431 QAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQGVADLYLLTVD 490 Query: 461 QLVEKEYVHT---PADLFK-----LTAGKLTGLE-------------------------- 486 QL++ + T P + L +G LE Sbjct: 491 QLLQLRMISTAESPHAFLREAREHLASGAYAQLEATLVGIGVDLAGEREVPQTWQADLLR 550 Query: 487 -----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 ++ K A+N++ A+E +++TT RFL+ALGI VGE+TA L+A+FG L Sbjct: 551 AGLPTFDWNRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTAKALSAWFGDL 610 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV-----HWPAP 586 + + ++VPD+G VA + +FF + N+ I LLA V H P+P Sbjct: 611 DLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLARKVRIGDTHPPSP 666 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 1/166 (0%) Query: 505 ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 E A L L I +V AA +A FG+++AL E L + V VA + + Sbjct: 671 ELRLANLLEDLEIPKVTPIRAAQIATAFGSIDALRNGGPEPLVEA-GVPQSVAESLATWL 729 Query: 565 AEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL 624 +N + + A + EE P G+TVV+TG+L+ ++RD AK RL L Sbjct: 730 LVPANDTLAVNAQKKLSALLAMMPEAGEEKTGPLDGQTVVITGTLAALTRDAAKQRLEAL 789 Query: 625 GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 GAKVAGSVSKKT ++AGE AGSKL KAQ LG+E+ DEA +L LG Sbjct: 790 GAKVAGSVSKKTAFLVAGEEAGSKLDKAQSLGVEIWDEARLLAFLG 835 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 307/666 (46%), Positives = 425/666 (63%), Gaps = 13/666 (1%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL+ + H++ YHV+D P I D EYD+L EL ++E L DSP+QRVG L Sbjct: 26 ELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNPKGLDLSDSPSQRVGGTVLEG 85 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F++ +H +PMLSL N + E F++RV+ L + V + CELK DGL++ ++YENG Sbjct: 86 FTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDPVEYLCELKFDGLSMELIYENGQ 145 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 LV A TRGDGT GED+T N++TI++IPLKL +N P LEVRGEV + + F ++NE + Sbjct: 146 LVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPLLEVRGEVLMFKEDFARLNETQQ 205 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 G + FANPRNAAAG++RQLD RI A RPL FF Y +G +E GE +T F Sbjct: 206 ENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYALGAVE-GETFNTQKNIQEYFNDH 264 Query: 250 GLPV-----SDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 G+P D + + + EEV+ +YH +E+ RP L FDIDGVVIKVNSL QE LG VA Sbjct: 265 GIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPFDIDGVVIKVNSLRLQEDLGLVA 324 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 R+PRWA A KF ++ T V D+ QVGRTGA+TPVA ++PV V GV V+NATLHN DEI Sbjct: 325 RSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAIMKPVKVGGVTVTNATLHNQDEI 384 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 R +RIGD V+I+RAGDVIP+VV VV +RP D P CP C S + EGE V Sbjct: 385 TRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLPYSIPERCPACDSVAVKAEGEVV 444 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 RC L C A KESLKHFV+RRAM++D +GD++I+ LV+ + + +D ++LT ++ Sbjct: 445 TRCVNPL-CIAVVKESLKHFVARRAMNIDKVGDRLIETLVDNKLLTRFSDFYRLTKEQIL 503 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 LER G KSA N++ ++E +K T ARF++ALGIR VGE T LA +F T++ AS Sbjct: 504 SLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQTGKHLADHFLTIDKFLEASE 563 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 EEL +VP++G VA + ++ + + ++ GV P + A+E +G + Sbjct: 564 EELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELGVKIAGP--VRAQE--GSLSGMSF 619 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 ++TG+L + RDDAK + G K+ GSVS K + ++ G+ GSK+ KAQ LG+++I Sbjct: 620 LITGTLP-VKRDDAKDLIERNGGKILGSVSSKLNYLVVGDDPGSKVEKAQGLGVKIISWE 678 Query: 664 EMLRLL 669 E+ ++ Sbjct: 679 ELQAMI 684 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 331/684 (48%), Positives = 433/684 (63%), Gaps = 37/684 (5%) Query: 18 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEV 77 H+ Y+ DAP + DAEYD L +E + P L DS +++VGAAP F ++ H+V Sbjct: 43 HDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDSLSEKVGAAPSEKFGKVAHKV 102 Query: 78 PMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 PMLSL N F +E + F RV+ L +++V + CE K+DGL+ S+ YENG L AAT Sbjct: 103 PMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPKIDGLSCSLHYENGRLTVAAT 162 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RGDG+ GED+T NVRTI IP +L G+ +P ++VRGEV++ +A FE +N KV Sbjct: 163 RGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVYMAKADFEALNARQAAAEEKV 222 Query: 196 FANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKKWGLPVS 254 FANPRNAAAGSLRQLD ITA RPL FF Y G E +LP +T G + F +WG + Sbjct: 223 FANPRNAAAGSLRQLDSSITASRPLKFFAYAWG--EASDLPAETQFGVVEAFARWGFTTN 280 Query: 255 DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFK 314 + + + A ++A Y +E R LG+DIDGVV KVNSL Q +LGFV+R+PRWA+A K Sbjct: 281 PLMVVAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLELQRRLGFVSRSPRWAIAHK 340 Query: 315 FPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDK 374 FPA++ T + D+E QVGRTGA+TPVA+L PV V GV+VS+ATLHN DEI R +RIGD Sbjct: 341 FPAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSSATLHNEDEIARKDVRIGDT 400 Query: 375 VVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS------DVERVEGEAVARCTG 428 VV++RAGDVIPQVV V+ +RP ++ FPTHCP CGS D + + +AV RCTG Sbjct: 401 VVVQRAGDVIPQVVRVIEEKRPAGSKPYEFPTHCPACGSHAVREVDTKSGKVDAVRRCTG 460 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 GLIC AQ E L+HFVSR A D++G+G+K + E + +PAD+F L L+R+ Sbjct: 461 GLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWGLIASPADIFTLETRNARSLQRL 520 Query: 489 ------GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA- 541 G SA N+ A+ + + RF++ALGIR VGE A L ++GT+EALEA Sbjct: 521 ENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGIRHVGETNAKRLMRHYGTVEALEAGA 580 Query: 542 ---------------SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 + +E+ + +G VVA V FF E NR V++ LL E P Sbjct: 581 LAAVIPGEEHPKGNEAWQEMIGIDGIGDVVAEAVIEFFGEPRNREVVTALLKEVTPEPME 640 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 V A SP +GKTVV TGSL +M+RD+AKA LGAKVAGSVS KT+LV+AG AG Sbjct: 641 QVAAA----SPVSGKTVVFTGSLEKMTRDEAKAMAERLGAKVAGSVSAKTNLVVAGPGAG 696 Query: 647 SKLAKAQELGIEVIDEAEMLRLLG 670 SKL KAQ LG++VI E E L+G Sbjct: 697 SKLEKAQALGVQVITEDEWFELVG 720 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 298/667 (44%), Positives = 420/667 (62%), Gaps = 9/667 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++ EL L + Y Y+V D P +PD+EYD+L+ EL ++E +HPE T DSPT Sbjct: 1 MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG A+F+++ H+ PMLSL N F+E+ F++R+++++ N V + CELK+DGLA Sbjct: 61 RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGN---VEYMCELKIDGLA 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ Y +G V TRGDGTTGEDIT N++TI AIPLK+ P +EVRGE ++P+ Sbjct: 118 VSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKE---PLNVEVRGEAYMPRRS 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++NE+ + ++FANPRNAAAGSLRQLD ++TAKR L+ F Y V + Sbjct: 175 FLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFN-ARSQS 233 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + K G + + + VL + K R +L +DIDG+VIKVN L QQ+++ Sbjct: 234 EALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEM 293 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF ++PRWA+A+KFPA+E +T + D+E +GRTG +TP A LEPV VAG VS A+LHN Sbjct: 294 GFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHN 353 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I +RIGD VV+++AGD+IP+VV + RPED PTHCP CG ++ R+EG Sbjct: 354 EDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEG 413 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ E L HFVSR+AM++DG+G KII QL + E + AD+F LT Sbjct: 414 EVALRCINPK-CQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEE 472 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG K N++ A+++AK+ + L+ LGIR +G + LA + T++ L Sbjct: 473 DLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLT 532 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP-FA 599 + EL ++ D+G VA V + E R +I +L + V+ + ++ P F+ Sbjct: 533 VTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFS 592 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT+VLTG L QM+R++A L GAKV SV+K TD+VIAGE AGSKL KAQ LGIE+ Sbjct: 593 GKTIVLTGKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEI 652 Query: 660 IDEAEML 666 E + + Sbjct: 653 WTEQQFV 659 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 330/696 (47%), Positives = 426/696 (61%), Gaps = 34/696 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +S E + ELR + ++ Y+V+D P + DAEYDRL+REL E+E HPEL T DSPTQR Sbjct: 8 DSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDSPTQR 67 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGL 119 V AP F ++ H PMLSL N+ + F+ RV L + +V + E KLDGL Sbjct: 68 VSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPKLDGL 127 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTI------RAIPLKLHGENIPARLEVRGE 173 AV ++YE G LV +TRGDG GED+T+N+RT+ R +P +L GE +P R+EVRGE Sbjct: 128 AVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGE-VPPRVEVRGE 186 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV------ 227 V L + FE +N R G + FANPRNAAAGSLRQLD R+TA+RPL+F Y Sbjct: 187 VLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEALVPGAE 246 Query: 228 --GVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 G G TH +L +WG + CE V A+ ++ E R L +D D Sbjct: 247 PGGARAGPWAWRTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMAERRFALPYDTD 306 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 GVV+KV+ L + +LG ++ PRWAVAFK+P QE+ T +R + VGRTG +TPV EP Sbjct: 307 GVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTPVVDFEP 366 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V ++G +VS ATLHN DE+ R + GD +++RRAG+VIP+VV + R + R FP Sbjct: 367 VRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEERPFAFP 426 Query: 406 THCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP+CG+ V R EGE V RCTG C AQ L HF RRAMD+DG+GDK+ LVE+ Sbjct: 427 AECPICGAKVVREEGEKVYRCTGA-ACPAQLVGRLTHFAQRRAMDIDGLGDKLALGLVER 485 Query: 466 EYVHTPADLFKLTAGKLTGL-------ER-----MGPKSAQNVVNALEKAKETTFARFLY 513 V ADL+ + L ER + KSAQN+V+ALE++K TT R L+ Sbjct: 486 GLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTLRRLLF 545 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ALGI +VGEATAA LA +FG L AS + L V DVG A + + E NR V+ Sbjct: 546 ALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQNRRVV 605 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 LLA GV PAP ++A PFAGKTVVLTG L+ +SRDDAKA + G KV+GSVS Sbjct: 606 ERLLAAGVR-PAPETVDA---GGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSVS 661 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +KTDLV+AG AGSKL KAQ LG+ V+ E E LR+L Sbjct: 662 RKTDLVVAGAEAGSKLEKAQALGVRVVGEEEFLRML 697 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 297/572 (51%), Positives = 397/572 (69%), Gaps = 9/572 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES + L L EY Y+V+DAPE+PD+EYD++ R L+++E HPELI DSPTQR Sbjct: 21 ESPTVAMRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQR 80 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGL 119 VG P F Q+RH VPMLSL N F++ LAF++RV++ L + + + + K DGL Sbjct: 81 VGGKPADGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFDGL 140 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+SI Y NG+ A TRGDGT GED+++NV+TIR++PLKL G +PA LE+RGE+F+ + Sbjct: 141 AISIHYTNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMTKK 200 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N+ G KVFANPRNAAAG++RQLDP++ A RPL F+CYG LE +L Sbjct: 201 DFLQMNQRQAELGLKVFANPRNAAAGTIRQLDPKVAASRPLRFYCYGAA-LEREQL--RE 257 Query: 240 LGRLLQFKKW----GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 L KW GLPVS+ AE +L+FY V R TL F+IDGVV KV+S Sbjct: 258 LKSQSAMMKWLAALGLPVSELSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSFD 317 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q+QLG+VA+APR+AVA KFP E ++ + ++E QVGRTG+ITPVA+LEPV V GV+VS+ Sbjct: 318 LQDQLGYVAKAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVSS 377 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHN DEI+R LR+GD+V++RRAGDVIP+V+ ++R + V PTHCP+C S V Sbjct: 378 ATLHNLDEIQRKDLRVGDQVLVRRAGDVIPEVLPFPGNQRSPVSSAFVMPTHCPICNSLV 437 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + EGEA RCTGGL+C AQ +S+ HF RRA+D++G+G K+++ LV+KE+V TPADLF Sbjct: 438 RKEEGEAAFRCTGGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADLF 497 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L L LERMG KSA+N++++++KAK+TTF RFL+ LGIR VGEATA LAAYF + Sbjct: 498 RLEFDALVQLERMGDKSARNLLDSIDKAKQTTFGRFLFGLGIRHVGEATARDLAAYFKNV 557 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEE 567 E L AS EEL +V +G+ NF + Sbjct: 558 ERLMNASEEELLEVTMLGLWWLHPYGNFLMNQ 589 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 310/668 (46%), Positives = 421/668 (63%), Gaps = 11/668 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++++ LR + +H Y Y+V+D+PEI D EYD+L REL LE + PE ITPDSPTQR Sbjct: 4 EEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F+ + HEVPMLSLDN F E+ AF++RV+ L N + V + CE KLDGLAV Sbjct: 64 VGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSAL-NQQHVEYFCEHKLDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LYENG+ V +TRG+G GED+T+N++TI+ IPL+L GENIP +E+RGE F+ F Sbjct: 123 SLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLRDF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E +NE + G +FANPRNAAAGS+RQLD ITA+R L F YG G+++G + +T Sbjct: 183 EALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMDF-ETQER 241 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L Q ++WG +++ S EE L F E R L F DGVVIKVN+L + LG Sbjct: 242 FLKQCQEWGFRINEHNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWDILG 301 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A APR+A+A+KFPA+E+ T ++DV FQVGRTG ITPVA LEPV + G VS ATLHN Sbjct: 302 TTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLHNF 361 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D + +L +R GD V ++RAG VIP+++ V +R ++ PT CPVCG E +G Sbjct: 362 DIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTE-WDG- 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ K L H+ SR AMD+DG+G+ II+ LV+ V ADL+KL+ Sbjct: 420 AYLKCV-NITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQD 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L R+ +SA + ++++K+ F R LY LGI VG TA LA +FG++ AL A Sbjct: 479 LLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +++EL + +G A + +I +L G+ + E I+ P G Sbjct: 539 TMDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLK------MEQESIEGPLKGL 592 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V TG+L+ MSR DA + LG KVA SVSK D V+ GE GSKL KAQ+LG+ +ID Sbjct: 593 TFVFTGTLTSMSRGDAAKLVQSLGGKVASSVSKNVDYVVVGEDPGSKLDKAQKLGLTIID 652 Query: 662 EAEMLRLL 669 E L+++ Sbjct: 653 EEAFLKMV 660 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 574 bits (1479), Expect = e-162, Method: Compositional matrix adjust. Identities = 293/667 (43%), Positives = 427/667 (64%), Gaps = 8/667 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S++ ++ +L T+ +H Y+ D+PEI D EYD+LM+EL LE +HPEL DSPT RV Sbjct: 5 SVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PL F+QI H+ PMLSL N F E+ F+KRVQ+ + E V + E K+DGL+V Sbjct: 65 GGKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYV--GENVEYVVEFKIDGLSVG 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y NG ATRGDG GEDI+ N+ T+++IPLK+ N L VRGEV++ + F Sbjct: 123 LTYNNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKI---NDKKELIVRGEVYISKDNFR 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+NE +FANPRN AAGSLRQLDP++TAKRPL F + + +E +L ++H Sbjct: 180 KVNEQQEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDL-ESHSES 238 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L +K G VS +C+S +EV+ ++R L ++IDG+VIKVN++ Q++++G+ Sbjct: 239 LEYLEKLGFSVSQSYKVCKSIDEVIEHIEYWTDNRGNLDYEIDGMVIKVNNIKQRDEMGY 298 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A++PRWA+A+KFPA+++ T + D+ +VGRTG ITP A LEPV +AG VS ATLHN D Sbjct: 299 TAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATLHNED 358 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I ++I D V++++AGD+IPQV+ V+ ER D + P CPVC R+EGEA Sbjct: 359 YIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEA 418 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 +C + C AQ + + HFVSR AM++DG+G+ II L+ ++ + +DL+ + + Sbjct: 419 AVKCI-NMSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDV 477 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LERMG KSA N++N++EK+KE R + LGI+ +G A LA F L+ + +A+ Sbjct: 478 VDLERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISAT 537 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E+L+++ + G ++A+ V FF E+ N NVI++L GV+ + + E+++ F G Sbjct: 538 SEQLEELEEFGSIMANSVVEFFKEDKNMNVINKLKNVGVNTKS-LDNTGEKVEKIFEGMK 596 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 +VLTG+L + R+DAK + + G K SVSK T V+AGE AGSKL KA +LGI+VIDE Sbjct: 597 IVLTGTLPTLKRNDAKEMIEKRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIKVIDE 656 Query: 663 AEMLRLL 669 L LL Sbjct: 657 ERFLELL 663 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 571 bits (1471), Expect = e-161, Method: Compositional matrix adjust. Identities = 319/684 (46%), Positives = 421/684 (61%), Gaps = 28/684 (4%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR L +H + Y+V+D EI DAEYD L REL+++E + P L TPDSPT RVG +AA Sbjct: 40 LRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVAAL 99 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 H + M SLDN F E + F +R+ R + + + C+ K+DGLA+ ++YENGV Sbjct: 100 ETQAHTLRMYSLDNAFSAEEWDGFIQRML-RAEPDAPTAFWCDPKMDGLALEVIYENGVF 158 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-PARLEVRGEVFLPQAGFEKINEDAR 189 +A TRGDG GE +T+ +RT+R +PL+LHGE PARLEVRGEV + +A F+ +N R Sbjct: 159 TTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAARR 218 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG-VLEGGELPD----------- 237 G K+FANPRNAAAGS+RQLD +TA RPL F YGVG V+ E D Sbjct: 219 GAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGPEA 278 Query: 238 ---THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 TH + +G CE+ +V+A+Y + R L FDIDGVV K++ L Sbjct: 279 RWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDGVVAKLDDL 338 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 + Q LG+ ARAPRWA+A KFPA + T + + QVGRTG +TPVA L PV V GV VS Sbjct: 339 SAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVTVS 398 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED-TREVVFPTHCPVCGS 413 ATLHN DEI LR+GD VV++RAGDVIP+VV ++ +RP E FP CPVC + Sbjct: 399 RATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECPVCHT 458 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 V R GEA RC + C A ++S+ HFVS+ +D+ G+G + ++ LV++ V +PAD Sbjct: 459 PVRREPGEAAWRCV-NVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVTSPAD 517 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKE-TTFARFLYALGIREVGEATAAGLAAYF 532 LF L L ERMGPK A+N + A + A+ T R + ALGIR VGE TA LAA+F Sbjct: 518 LFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTLAAHF 577 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINA 591 L+AL AA E LQ++PD+G VA+ + FFA E NR ++ L G+ WP P+ A Sbjct: 578 ADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGL-WPVRPVRPEA 636 Query: 592 E------EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 + E P AG V+ TGSL+ ++R DA+ R V GA + GSVSKK DL++ G+ Sbjct: 637 DAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVSKKLDLLVVGDKP 696 Query: 646 GSKLAKAQELGIEVIDEAEMLRLL 669 GSKL KA +LGI V+ E E L LL Sbjct: 697 GSKLDKATKLGIRVLREQEFLDLL 720 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 330/718 (45%), Positives = 426/718 (59%), Gaps = 66/718 (9%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +L L + H+ LYH DAPEI D EYD L+R ELE P L+ DSP+++VG A Sbjct: 15 NELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSPSRKVGHA 74 Query: 66 PLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLAVS 122 A+ S++ HEV M+SLDN F +E F RV+ L +E + + E K+DGL+ S Sbjct: 75 VAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDKIDGLSCS 134 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE-------------------- 162 + YENG LV AATRGDG GED+T NV I IP +L Sbjct: 135 LRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGAGGGPLDDSGSAPTP 194 Query: 163 ----------NIPARLEVRGEVFLPQAGFEKIN----EDARRTGG-----------KVFA 197 N PA E+RGEV++ A F +N ++AR + FA Sbjct: 195 DPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADEKDNAFDTAKVRQFA 254 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRV 257 NPRNAAAGSLRQ D +TA RPL F+ +G G +EG +T + + Q WG+PVS Sbjct: 255 NPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVVEQIAAWGVPVSPLF 314 Query: 258 TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPA 317 CE+ EE+LA Y + R L ++IDGVV KV+ L Q++LGFVA+APRWA+A KFPA Sbjct: 315 RRCETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRWAIARKFPA 374 Query: 318 QEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVI 377 ++ T + +++ QVGRTG +TPV RL PV V GV V+N TLHN DEIERLG+R GD+VV+ Sbjct: 375 EQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGVRPGDRVVV 434 Query: 378 RRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRK 437 +RAGDVIPQVV + + D+ E FP CP CGS+ EG RCTGGLIC AQR Sbjct: 435 QRAGDVIPQVVRNLTPDEKRDSFE--FPDTCPECGSEAVSEEGGVDVRCTGGLICPAQRT 492 Query: 438 ESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK--LTGLERMGPKSAQN 495 E LKHFVSR A+D+DG+G+K IDQ ++ +PAD+F+L + + LE KS N Sbjct: 493 ERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEILALEGWMDKSVDN 552 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL----------EAASIEE 545 ++ ++E +E AR L LGIR VG TA L YF L AL + ++ Sbjct: 553 LLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAEKARAGDEEAVVA 612 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L + +G V + +FF EE NR V +LL+E +P E +DSP AGKTVV Sbjct: 613 LTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSE----VSPPRYEVETLDSPVAGKTVVF 668 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 TG L MSRD+AKA+ LGAK +GSVS KTDL++AG AGSKL KAQ+LGIEVIDEA Sbjct: 669 TGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKLKKAQDLGIEVIDEA 726 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 314/666 (47%), Positives = 428/666 (64%), Gaps = 11/666 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q++ ELR +R+H Y+V DAPEI DAEYD L REL ELE++ PEL+TPDSPTQRVG Sbjct: 22 QRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQRVGGE 81 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGLAVSI 123 PL F ++RH VPMLSL N E ++ RV+ L E ++ + ELK+DGLAVS+ Sbjct: 82 PLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGLAVSL 141 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG LV ATRG+G GED+T +RTIR++P +L ++ P LE RGEV++ FE+ Sbjct: 142 RYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLD-DDPPGVLEPRGEVYIKLKDFEE 200 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 N + G + FANPRN AAGS+RQLDPR+TA+RPLT + YGVG EG E ++H L Sbjct: 201 FNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVG--EGYENFESHSEAL 258 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 +++GL V+ T+ + V+ + + R L F +DGVV+KV+S QQE+LG V Sbjct: 259 AALRRYGLRVNPH-TVHGDIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERLGAV 317 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 +APRWA+A+KF T +RD+ VGRTGA+TP A LEPV+V GV +S ATLHN D Sbjct: 318 QKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHNEDY 377 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I+ G+ IGD V++ RAGDVIPQVV V ER D E P CPVCG V R EGEA+ Sbjct: 378 IKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPEGEAI 437 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 RC + C AQ E + H+ SR AMD++G+G+K+ +L + + ADL++L A +L Sbjct: 438 TRCA-NVRCPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRAEQLA 496 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 LE +G KSAQN++ A+E++KE F R L+ LGIR VG ATA +A F E L + Sbjct: 497 PLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGIRHVGSATAELIAERFSGEELLRGVGV 556 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 EEL ++ VG +VA V +F+ E NR ++ L+ G+++ P+ EE P +G+ + Sbjct: 557 EELTQIEGVGEIVARAVVEYFSLEENRKLVRRLMEHGLNF-GPVRGKPEE--GPLSGRRL 613 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TG+LS+ R + + G V SVS+ TD ++AGE GSKL +A+ELG+ V+DE Sbjct: 614 VITGTLSR-PRSEISDLIEGAGGTVTSSVSRNTDYLVAGENPGSKLERARELGVPVLDEE 672 Query: 664 EMLRLL 669 + RLL Sbjct: 673 GLRRLL 678 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/668 (44%), Positives = 420/668 (62%), Gaps = 9/668 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+ Q+ L + +H Y+ D PEI D EYD LM+EL +LE ++PE DSP+ R Sbjct: 4 EDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSPSNR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L F Q+ H+ PMLSL N + E F++RV++ + V + E K+DGL+V Sbjct: 64 VGGMALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVREMTDGD--VEYVVEFKIDGLSV 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 I YENG SAATRG+G GEDI+ NV TI++IPLK+ + + VRGEV++ + F Sbjct: 122 GITYENGEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDDKR---EIIVRGEVYISKENF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+NE ++FANPRN AAGSLRQLD ++TAKRPL F + + + + DTH Sbjct: 179 EKVNEYQEEHDLQIFANPRNLAAGSLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSD 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK G VS+ +C+S +EV+ F E+R +L FDIDG+V+KVN++ Q+ ++G Sbjct: 239 SLEYLKKLGFSVSENYKICKSIDEVIEFIEYWTENRGSLKFDIDGMVVKVNNIEQRNEMG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F A++PRWA+A+KFPA+ + + + D+E +VGRTG ITP A LEPV +AG VS ATLHN Sbjct: 299 FTAKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +++ D V++++AGD+IPQ+V VV +R D ++ V P+ CP CG R+EGE Sbjct: 359 DFIREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEGE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ + + HFVSR AMD+DGMG+ II +++ + +D++ L + Sbjct: 419 AAVKCI-NISCPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LERMG KSA N++ A+EK+K R + LGIR VG A LA+ F +L+ + A Sbjct: 478 IVPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +E LQ++ + G +++ V FF EE N VI +L GV+ A +E I F G Sbjct: 538 DVERLQQLEEFGSIMSESVVKFFREEQNLAVIQKLKDAGVNTEAG-EDKSEGIPQLFEGM 596 Query: 602 TVVLTGSLSQMSRDDAKARLVEL-GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 +VLTG+L + R+ AK ++EL G K SVSK T V+AGE AGSKL KA +LGI+VI Sbjct: 597 KIVLTGTLPTLKRNQAK-EIIELRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIKVI 655 Query: 661 DEAEMLRL 668 DE L+L Sbjct: 656 DEDMFLKL 663 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 299/669 (44%), Positives = 417/669 (62%), Gaps = 6/669 (0%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I++++ +L L +H Y Y+V+D+P I D EYD ++R L+ELE K I PDSPTQR Sbjct: 6 EDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKWG-YILPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGAAP F + H PMLSLDN F E F+ RV+ L ++E+V + E K DGLAV Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEELRDFDARVKRLLGSSEEVEYTVEPKYDGLAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-ENIPARLEVRGEVFLPQAG 180 + Y++G+L A+TRGDG GEDIT N++TI+AIPL++ G + IP +++RGEV+L Sbjct: 125 ELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIPEEIDIRGEVYLNIDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE+IN++ G VFANPRNAA+GS+RQLDP ITA R L CYG+G ++G E + + Sbjct: 185 FERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIEF-KSQI 243 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + KK PV V L + EEV+ ++E+ R F+ DG V+KVNS Q +L Sbjct: 244 EFIEWLKKGRFPVPAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFELQRKL 303 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G R PRWA+A+K+PA + +T ++D+ VGRTG ITPVA LEPV + GV VS +TLHN Sbjct: 304 GTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSRSTLHN 363 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+ER +R+GD V++ RAG+VIP ++ VV R + +EV P HCPVCGS R G Sbjct: 364 WDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKTVREPG 423 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E +C C AQ +E +KHF SRRAM+++G+GDK ++ L K + DL+KL Sbjct: 424 EVAVKCI-NFNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYKLRQE 482 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GL S++ ++ A+ K+K+TT +R LYALGI +VGE + LA +F LE L Sbjct: 483 DIKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLEDLYH 542 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 E+L ++P +G A + FF E N I EL G+ P E+ SP G Sbjct: 543 IKAEKLVQIPQIGEKTAKTIEQFFNNEENLKAIEELKRMGLKVENP-EFEEEKKPSPLKG 601 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 T V+TG+L + R++ K + + G KV+ SVSK TD ++ GE GSKLAKAQ L ++ + Sbjct: 602 LTFVITGTLPK-PREEVKEMIEKAGGKVSSSVSKNTDYLLVGEDPGSKLAKAQALRVKTL 660 Query: 661 DEAEMLRLL 669 E L++L Sbjct: 661 SYEEFLKML 669 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 301/617 (48%), Positives = 390/617 (63%), Gaps = 40/617 (6%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E + LR L + + Y+V+D P +PD EYDRL REL LET+HPEL TPDSPT RVG Sbjct: 18 EARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPTLRVGG 77 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRL---KNNEKVTWCCELKLDGL 119 A L F+ +RH +PMLS+ D + AF+ V+ L + V + ELK DGL Sbjct: 78 AVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAELKFDGL 137 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--GENIPARLEVRGEVFLP 177 A+++ YE G LV AATRGDGTTGED+T N+RTIR IPL L ++P LEVRGEV++ Sbjct: 138 AINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRGEVYMR 197 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE-LP 236 + FEK+N R G K F NPRN AAG++RQLDP++ A+RPL+FF YG+G + G + +P Sbjct: 198 RDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVAGWKGMP 257 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 TH L + +G PVS+ E ++ F+ + R +L FDIDGVV KVNSLA Sbjct: 258 GTHSSMLDVLQAFGFPVSNERAAVAGGEGLVRFHEAIRAKRDSLPFDIDGVVYKVNSLAL 317 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q +LGF +R PRWAVA K+PAQE +T V ++ QVGRTGAITPVARL PV V GV V+NA Sbjct: 318 QRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITPVARLVPVFVGGVTVTNA 377 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT---------------RE 401 TLHN DE+ R +R+GD V++RRAGDVIP+VV+VVL RP D Sbjct: 378 TLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPLDDVPGSDLFNPQQQPKYPP 437 Query: 402 VVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQ 461 P CPVCGS V R EGEAVARC+GGL C AQRKE+++HF RR MD++G+G++ ID Sbjct: 438 FELPKTCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLGERYIDN 497 Query: 462 LVEKEYVHTPADLFKLTAGKLTGLER-----------------MGPKSAQNVVNALEKAK 504 LVE +YVH ADL+KLT ++R + K A+N++ ++ +K Sbjct: 498 LVELDYVHGIADLYKLTLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLEGIQASK 557 Query: 505 ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 ARFL+ALGIR VGE+TA LA + G+L + A L +PDVG VA + +FF Sbjct: 558 TPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPAPLLLALPDVGATVAEAIADFF 617 Query: 565 AEESNRNVISELLAEGV 581 AE N+ + LL GV Sbjct: 618 AEPKNQQALDALLEAGV 634 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/70 (70%), Positives = 59/70 (84%) Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTG+L ++RD+AKA L GAKV+GSVSKKTD V+AGE AGSKLAKA+EL ++V Sbjct: 740 GKTVVLTGTLPNLTRDEAKAMLEAAGAKVSGSVSKKTDYVVAGEDAGSKLAKAEELNVKV 799 Query: 660 IDEAEMLRLL 669 +DEA ML LL Sbjct: 800 LDEAGMLALL 809 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 298/670 (44%), Positives = 431/670 (64%), Gaps = 12/670 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++++ +L E++ L + Y Y+V+D + DA YD L REL E+E HPE ITPDSPTQR Sbjct: 6 QNLQARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSPTQR 65 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L FS++ H M SL N F E F +RV +++ V++ CE K+DGLA+ Sbjct: 66 VGDQLLEGFSKVAHAESMYSLGNAFSPEEVTQFIERVTQQVEG--PVSFMCECKIDGLAI 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y++GV V ATRGDGT GEDIT N+RTIR++PL+L +N+ +EVRGE ++P+A F Sbjct: 124 ALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLR-QNL--SVEVRGECYMPKAVF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE+ G ++F NPRNAAAG LRQLDPR A R L F Y V P++ G Sbjct: 181 LALNEEREAQGQEIFKNPRNAAAGGLRQLDPRAVADRQLNIFLYS-AVYTDEFHPESQAG 239 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 F++ GL + C++AEEV+ + + + R L ++IDGVVIKVN + QQ+ LG Sbjct: 240 LFAAFEQLGLRTNPLRRECQTAEEVIDYIQMIGQQRHDLPYEIDGVVIKVNHIDQQQALG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F +APRWA+A+KFPA+E +T +R+VE+ VGRTG +TP A ++PV +AG V A+LHN Sbjct: 300 FTVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPVPLAGTTVQRASLHNV 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D IE L +RIGD+V I +AGD+IP++ +V+L++RP+D++ + PTHCP C + + R +GE Sbjct: 360 DLIESLDVRIGDQVTIHKAGDIIPEITSVLLAKRPQDSQPLAIPTHCPECQTALVR-QGE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 VA L+C AQR L HFVSR AM++ G+G +I++QLV + V DL++L+ Sbjct: 419 EVALRCPNLVCPAQRLALLSHFVSRGAMNIQGLGPRILNQLVASQAVTELDDLYRLSLED 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+++ KSAQ ++ A+E +K + R L+ LGIR VG A + FG L L A Sbjct: 479 LLSLDKIQEKSAQKLLAAIEASKSNSAERLLFGLGIRHVGAKAARLVLQVFGDLNRLSQA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW----PAPI-VINAEEIDS 596 + EE+ + VG +++ + + ES++ ++ L GV+ P P+ V E + Sbjct: 539 TAEEIGAIEGVGPIISQSLVQYLTLESSQAMLKRLAEAGVNLTYQGPQPLEVAQGETAND 598 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 + GKTVVLTG++ SR +AK L GAKV GSVSKKTD ++AG+ AGSKL+KA+ LG Sbjct: 599 FWLGKTVVLTGTMESYSRSEAKELLEARGAKVTGSVSKKTDYLVAGQEAGSKLSKAESLG 658 Query: 657 IEVIDEAEML 666 + ++DEA L Sbjct: 659 VTILDEASFL 668 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 299/595 (50%), Positives = 397/595 (66%), Gaps = 16/595 (2%) Query: 87 DEESFLAFNKRVQDRLK--------NNEKVTWCCELKLDGLAVSILYENGVLVSAATRGD 138 D +S L+ ++ D L+ ++V + E KLDGLA S+ Y GVLV AATRGD Sbjct: 156 DTKSLLSSGRKAADILRRLRLWAAEQPQRVEYVAEPKLDGLAFSLTYAEGVLVRAATRGD 215 Query: 139 GTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFAN 198 G GED+T++ RTI+ +PL+L G PA LEVRGEV++P A FEK+N +AR G K FAN Sbjct: 216 GQEGEDVTAHARTIQDVPLRLQGAGYPALLEVRGEVYMPLATFEKLNAEARERGEKTFAN 275 Query: 199 PRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVT 258 PRNAAAGSLRQLDP+ITA R L FCYG G +EGG L D + L K WGL VS Sbjct: 276 PRNAAAGSLRQLDPKITASRGLRMFCYGTGYVEGGTLADRYAEILAALKGWGLRVSPEAE 335 Query: 259 LCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQ 318 E A+ LA+ ++ E R TL ++IDG V+KV+S +E+LGFVARAPRWA+AFKFPA Sbjct: 336 RVEGAQGCLAYTERLGEKRETLPYEIDGAVLKVDSQRLRERLGFVARAPRWAMAFKFPAT 395 Query: 319 EQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIR 378 E+ T V+ ++ QVGRTG ITPVARLEPV V GV V+NATLHN E+ R +R+GD+V++R Sbjct: 396 EESTTVQAIDLQVGRTGVITPVARLEPVAVGGVTVTNATLHNFLELARKDVRVGDRVIVR 455 Query: 379 RAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKE 438 RAGDVIP+VV V+ E P CPVCG+ ER GE RC+GGL C AQ KE Sbjct: 456 RAGDVIPEVVRVIPRESHGALAVYKEPVACPVCGAPTEREGGETALRCSGGLTCRAQVKE 515 Query: 439 SLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK--LTGLERMGPKSAQNV 496 +KHF SR+AM+++G+GDK++ L++ V +DL++L + L GLER+G KS N+ Sbjct: 516 GVKHFASRKAMNIEGLGDKLVALLMQAGLVERISDLYRLHEQRQVLVGLERLGGKSVANL 575 Query: 497 VNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVV 556 + A+E++K + ARFL+ LGIR+VG A LAA+F +L+AL AA++E+L + DVG VV Sbjct: 576 LEAIEQSKAQSAARFLFGLGIRDVGVTLAGSLAAHFTSLDALMAATVEDLVGIEDVGEVV 635 Query: 557 ASHVHNFFAEESNRNVISELLAEGVH-----WPA-PIVINAEEIDSPFAGKTVVLTGSLS 610 A V +FFA+ + ++ L A GV W P + P +G +VVLTG+L+ Sbjct: 636 ARRVVHFFAQAHHGAELAALRALGVAAAGEPWRVEPDGHGVAAAEQPLSGLSVVLTGTLA 695 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 ++R+ A RL LGAKV SVS KT ++ GE+AGSKLAKAQ+ G+ V+DEA + Sbjct: 696 GLTREAAAVRLEGLGAKVVASVSGKTGCLVCGESAGSKLAKAQKAGVPVLDEAAL 750 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 62/96 (64%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR L H+ + YH +D + DAEYDRL REL+ LE P LI+ DSPT RVG A L Sbjct: 8 ELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAILEG 67 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN 105 F ++RH V MLSLDN F + + F++RVQ+ L + Sbjct: 68 FEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGLAES 103 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 313/664 (47%), Positives = 416/664 (62%), Gaps = 9/664 (1%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR L ++ Y+V+D P + D EYDRL REL+ +E ++P L T DSPT+RVGA +A Sbjct: 18 ELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTRRVGAPVQSA 77 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-WCCELKLDGLAVSILYENG 128 FS RH V MLSLDN FD F + ++ + + + + ELK+DG AV++ Y G Sbjct: 78 FSPHRHLVRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKIDGAAVALTYREG 137 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 VLV+AATRGDGT GED+T+NVRTIR +PL+LHG+N P +EVRGEV+LP AGFE++NE Sbjct: 138 VLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLMEVRGEVYLPFAGFERMNEAR 197 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL-QFK 247 G V+ NPRNAAAGS+RQLD TA RPL FF Y VL G P LL Q Sbjct: 198 VAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYA-AVLPDGSAPARSQWELLEQLS 256 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFDIDGVVIKVNSLAQQEQLGFVA-R 305 WG+PV+ C + +E A+ VE E R TLGF IDG V+KVN +A Q++LG A R Sbjct: 257 AWGVPVAPHRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDMALQDELGIRADR 316 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 PRW VA KF +T +R ++ VGRTG +TP A LEPV V G V+ A+LHNAD+I Sbjct: 317 TPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATVTFASLHNADQIA 376 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 LR GD V + RAGDVIP V+ V +R + PT CP C + VER G+ VA Sbjct: 377 AKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNTPVERY-GDDVAV 435 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 + C ++ E L HF S+ A+D+DG+ I QL++ VH ADLF +T +LT L Sbjct: 436 YCPNVACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADLFDITVDQLTSL 495 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 ER KSA+N+V A+ AK+ +R ++ LGIR VG A L+ +G+L+AL A+ E+ Sbjct: 496 ERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGSLDALMNATAEQ 555 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L V +G ++A V ++FA+ + R ++ L A G+ + P NA + D G TVVL Sbjct: 556 LGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP---NAVQADGVLTGATVVL 612 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L +SR +A A + + G +V SVSKKT V+AGE AGSKL KA+ELG+ V+ EAE+ Sbjct: 613 TGTLPSLSRGEATALVEQAGGRVTSSVSKKTTFVVAGEEAGSKLDKAKELGVTVLTEAEL 672 Query: 666 LRLL 669 L L Sbjct: 673 LEKL 676 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 301/685 (43%), Positives = 420/685 (61%), Gaps = 24/685 (3%) Query: 1 MESIEQQLTE---LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ME + L E LR + H LY+V D PEI DA+YD L+R L+ELE HPEL+TPDS Sbjct: 1 MEDMFSPLIEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDS 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PTQRVGA PL AF + H P+LSL N F + A+ +RV+ +L N CE K+D Sbjct: 61 PTQRVGAEPLKAFGIVNHPYPLLSLANAFSDTELEAWYQRVK-KLLGNIPFQIDCEPKMD 119 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLAV++ Y NG + ATRGDG GE+IT N+RTI +IPL N P EVRGEV+L Sbjct: 120 GLAVALTYRNGKFATGATRGDGFQGENITRNLRTIHSIPLNAE-PNAPPVFEVRGEVYLS 178 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + GF K+N + G +FANPRNAAAGSLRQLDP +TA+RPL F Y +G E LPD Sbjct: 179 KNGFAKLNRERADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPD 238 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +H L F K G ++ L + EE +Y ++ +R +L ++ DGVV KV+S++ Q Sbjct: 239 SHWQILDYFSKIGFRINPLNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFKVDSVSLQ 298 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG V R PRWA+A+KFPA++ MT ++ + VGRTG + P A LEPV+V GV+V A Sbjct: 299 HRLGDVGREPRWAIAYKFPAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAA 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR-----EVVFP-----TH 407 LHN D+I R +R GD V+I+RAG+VIP+VV VLS+R +++ E +F T Sbjct: 359 LHNEDDILRKDIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTA 418 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CPVCG ++ R GEA+ C + C AQ + L+HFVSR AMD+ G+G+ + L ++ Sbjct: 419 CPVCGGEIYRPAGEAMHYC-ANVSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGL 477 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 V +DL+ LT L L RMG KSA N+++A+ +K R ++ LG+R VG TA Sbjct: 478 VKNVSDLYYLTTADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGVRHVGNETATL 537 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-- 585 L+ ++G + AL + ELQ +PD+G +AS + +F+EE N VI L GV + Sbjct: 538 LSRHYGNIWALAKTGLGELQTIPDIGDKIASSIVAYFSEEKNVAVIRRLEEAGVRLTSDQ 597 Query: 586 -PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 P+ N PF+G V+TG L SR++A+ ++ LG +V+K T+ ++ G Sbjct: 598 KPVNKNM-----PFSGMEFVVTGKLESFSREEAQEKIRSLGGTAKDNVTKATNYLVVGAD 652 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLL 669 AGSKL KA+ +G++ + E E + +L Sbjct: 653 AGSKLTKARSMGVKELSEREFINML 677 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 286/603 (47%), Positives = 390/603 (64%), Gaps = 28/603 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +Q++ L L + + Y+ +DAP +PD+EYDRL REL LET++P+ P+SPT R Sbjct: 21 QQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTNR 80 Query: 62 VGAAPLAAFSQIRHEVPMLSLDN----------VFDEESFLAFNKRVQDRLKNNEKVTWC 111 VG A L F + H VPMLSL N FD AF++RV L + Sbjct: 81 VGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAFDERVCKDL-GAAHTEYI 139 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY+NG+L+ AATRGDGTTGED+T N++T+R IPL+LHG+ +P +EVR Sbjct: 140 IEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDLIEVR 199 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQL+ ITA+R L FF YG+ L Sbjct: 200 GEVLMLKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGYGIARLS 259 Query: 232 GG-ELPDTHLGRLLQFKKWGLPVSD-RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 P+ H + + G ++ +C + +EVL FY + + RP L ++IDG+V+ Sbjct: 260 TAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYEIDGMVV 319 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN L QQ+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTG+ITPVARL+PV V Sbjct: 320 KVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARLKPVFVG 379 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV------ 403 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV VVL RP +++ Sbjct: 380 GVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLLGERQEP 439 Query: 404 ------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GDK Sbjct: 440 QHPAFRLPETCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMDIVGLGDK 499 Query: 458 IIDQLVEKEYVHTPADLFKLTAGKLTGLERM---GPKSAQNVVNALEKAKETTFARFLYA 514 I+ LVE++ +H+ AD+++L KL ++ K N+++A+ +++ ARFL+A Sbjct: 500 QIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPPLARFLFA 559 Query: 515 LGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVIS 574 LGIR VGE+TA LAA FG + + A L +PD+G VVA + +FF + ++ Sbjct: 560 LGIRHVGESTAKQLAAAFGDWDTVRRAPEPVLACLPDIGSVVAHSIAHFFRLPEQQKLLD 619 Query: 575 ELL 577 +LL Sbjct: 620 DLL 622 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/71 (59%), Positives = 50/71 (70%) Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GK VLTG+L + RD A A + G KV+GSVSKKTD V+AG AGSKL KAQ LGI V Sbjct: 727 GKIFVLTGTLPTLKRDQAAALIEAAGGKVSGSVSKKTDFVVAGAEAGSKLEKAQSLGITV 786 Query: 660 IDEAEMLRLLG 670 + E E+L +LG Sbjct: 787 LSEEELLGMLG 797 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 302/670 (45%), Positives = 410/670 (61%), Gaps = 9/670 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + Q++ ELR + H Y Y+V+D P I D EYD LM+EL LE +PEL TPDSP+Q Sbjct: 3 LAAARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSPSQ 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG AP F+Q+RH +LSL++ F+E L F++RV+D V + E K+DGLA Sbjct: 63 RVGGAPREEFNQVRHPQVLLSLNDAFNEGDLLEFDRRVRD--LAGRPVEYVIEAKIDGLA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V++ Y +G+ ATRGDG GE++T+N++TI A+ L L VRGEV++P+ Sbjct: 121 VALTYRDGLFTLGATRGDGQVGEEVTANLKTIPAL--PLRLRRPLPFLVVRGEVYMPKVA 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F +N G +FANPRNAAAGSLRQLDP+ITA R L+ F Y V L G E+ T Sbjct: 179 FTALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVYQVISLTGAEVA-TQA 237 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHK-VEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 G L + G PV+ + + VL E R +L ++IDG+VIKVN LA Sbjct: 238 GALDFLAELGFPVNPYRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVNDLALHSV 297 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG A+APRWA+A+KFPA++ V + +VGRTG +TP A L PV +AG VS ATLH Sbjct: 298 LGATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTTVSRATLH 357 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N D I +RIGD V++++AGD+IP+VV V+ R P CP CG+ V R Sbjct: 358 NEDYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACGAAVVRPP 417 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GEA RCTGGL C AQ E + HF SR AMD+ G+G I+ QL+E +H ADL+ L Sbjct: 418 GEAAHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIHDAADLYYLKE 477 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L LER G +SA N++ A+ +K+ R ++ALGIR VG+ A LA +FG+L+ L Sbjct: 478 EDLLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLADHFGSLDKLA 537 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AA++EEL +PD+G +A ++ FF E NR V+ +L GV A +NA P Sbjct: 538 AATVEELTALPDIGPRIAENIREFFGEPRNRAVLEKLKKAGVRLEA---LNAAAPAGPLT 594 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GK VLTG+L M+R +A+ + G KV+ SVS+KTD V+AGE GSKL +A+ELG+ V Sbjct: 595 GKVFVLTGTLPGMTRQEAEELITRAGGKVSSSVSRKTDYVVAGEKPGSKLDRARELGVPV 654 Query: 660 IDEAEMLRLL 669 I+ + +LL Sbjct: 655 INADGLRQLL 664 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 303/708 (42%), Positives = 420/708 (59%), Gaps = 58/708 (8%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I Q++ ELR ++ Y Y+V+DAP + D YD+L REL++LET++PEL+TPDSPTQRVG Sbjct: 20 IRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDSPTQRVG 79 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR----------LKNNEKVTWCCE 113 P F ++H +P+ SL+N F A+ R Q + L++ E V CE Sbjct: 80 EQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQAIGEQSATLRSPEYV---CE 136 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGE 173 LK+DG A+++ YENGVLV ATRGDG GEDIT+NVRTIR+IPL+L + P +EVRGE Sbjct: 137 LKIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEVRGE 196 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG 233 FLP F ++N++ + G +FANPRNAAAG+LRQLD RI AKR L FF Y + + Sbjct: 197 AFLPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAKRRLDFFAYTLHLPLAS 256 Query: 234 -------------------------------------------ELPDTHLGRLLQFKKWG 250 LP T L ++ G Sbjct: 257 ARSATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTHLPQTQWQSLELLQQIG 316 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 V+ LC + +V +Y R L + DGVV+K+NSL QE LGF + PRWA Sbjct: 317 FRVNPHRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSLRLQEHLGFTQKFPRWA 376 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+K+ ++ +T V ++ VGRTGA+TPVA L PV +AG VS ATLHN D + L L Sbjct: 377 IAWKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVSRATLHNRDRLAELDLH 436 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 IGDKVVI +AG++IP+++ V RP D R PTHCP CG V + EAV RC + Sbjct: 437 IGDKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQPVVQPVDEAVTRCL-NV 495 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C A + ++ H+V R AMD+DG+G+K++ QLV++ V++ ADL++LT +L LERMG Sbjct: 496 SCPAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLERMGN 555 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 K A+ VV A+ K++ ++R LY LGIR VG A L F ++E L AAS E+++ V Sbjct: 556 KLAEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIEAVH 615 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV-INAEEIDSPFAGKTVVLTGSL 609 +G +A + +F +N ++I +L A GV V + ++ P AGKT VLTG+L Sbjct: 616 GIGPEIAQSIVQWFQTPANHSLIEQLSAAGVQLAQDTVAVPPSQLPQPLAGKTFVLTGTL 675 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 +SRD+A++ + + G KV SVSKKTD ++ G AGSKL KA +LGI Sbjct: 676 PTLSRDEARSMIGQAGGKVTDSVSKKTDFLVVGADAGSKLDKAGQLGI 723 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 315/689 (45%), Positives = 425/689 (61%), Gaps = 29/689 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + ++ LR + H+ +LY+ DAP I DA +D LMRELR+LE +HPE P SPTQR Sbjct: 13 DDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYDPTSPTQR 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F+ + H M SLDN D + A+ R + L + V CCELK+DG + Sbjct: 73 VGGYVGEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTD--VPLCCELKIDGSGI 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPA------RLEVRGEVF 175 ++ YE+G L+ AATRGDG GED+T+N+RT+R +PL+L E + A LE+RGEV+ Sbjct: 131 AVTYEDGRLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALELRGEVY 190 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 +P+ F +N A R G + FANPRNAAAGSLRQ DP ITA+R L+ F Y L Sbjct: 191 MPKKSFNALNAAADREGRQEFANPRNAAAGSLRQKDPTITAQRDLSTFTYATASNAALTL 250 Query: 236 PDTHLGRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 P LL++ + G V+ V LC S +EV AF + + R +L ++IDGVV+KVN Sbjct: 251 PGQW--ELLEWMRNAGFHVNPDVRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVKVNDF 308 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 + Q++LGF ARAPRWA+AFKFP +E+ T +RD+ QVGRTGA+TPVA LEPV V+G +VS Sbjct: 309 SLQDRLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSGSVVS 368 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN DE+ R +R+GD V++R+AGDVIP+V+ VLS RP D + PT CP CGS Sbjct: 369 RATLHNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPSCGSP 428 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 V R EG A+ RC L C AQ E L H+ SR A+D++GMG+++I +L+E V AD Sbjct: 429 VVREEGGAILRCV-SLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDVADY 487 Query: 475 FKLTAGKLTGLE-----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 + LT L L+ +G A +V ++++K FAR L+ LGIR VG+ Sbjct: 488 YHLTEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGIRHVGKT 547 Query: 524 TAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 TA +A + ++EAL A +++L + +G ++A + F N VI LLA GV Sbjct: 548 TAEAIAQAYPSIEALREAKMDDLAAIEGIGPIIAESLFVFLRTPQNVQVIDRLLAAGVVM 607 Query: 584 -PAPIVINAEEIDSPFAGKTVVLTGSLSQ--MSRDDAKARLVELGAKVAGSVSKKTDLVI 640 A + A + +G T VLTGSL Q M+R +A L +GAKV+GSVS KT VI Sbjct: 608 EEAALTPRAPQT---LSGLTFVLTGSLVQSGMTRTEAGDALKAMGAKVSGSVSGKTSFVI 664 Query: 641 AGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 AGEAAGSK KA LG+ VIDEA L +L Sbjct: 665 AGEAAGSKRDKAVSLGVPVIDEAAFLHIL 693 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 283/669 (42%), Positives = 428/669 (63%), Gaps = 11/669 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+++ EL +R ++Y Y+V P + D EYD L EL LE HPELITPDSPTQR Sbjct: 28 EEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELITPDSPTQR 87 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G PL+ FSQ+ HE+PMLSL+N + +E AF +R++ L +K+++ E K+DG+++ Sbjct: 88 IGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPG-KKISFTVEPKIDGVSI 146 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S +Y+NG+ ATRG+GT G+DIT N++TIR++PL+L + P LEVRGE ++ F Sbjct: 147 SAVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEAYMSPKDF 206 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N + G +FANPRNA AGSL+QLDPR+ A+RPL YG G L G + T Sbjct: 207 ERLNAQREKEGKVLFANPRNATAGSLKQLDPRVVAERPLAVVFYGAGKLVGMKC-KTQEE 265 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK GLP+ +C + EV K+ E R L + DG +KVN LG Sbjct: 266 WLNFLKKIGLPIPIVFWVCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEWEYYSLLG 325 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A+APRWA A+K+ A+ T + +V FQVGR+G ITPVA ++PV ++G VS ATLHN Sbjct: 326 YTAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVSRATLHNF 385 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+++RL ++IGD V + +AG+VIP+VV V L++R +E+V P CP CG E++ E Sbjct: 386 DQVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEKEIVPPEFCPSCG---EKLSWE 442 Query: 422 AV-ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + RC C AQ KE + HF R AMD+ G+G+ ++DQLV+K V AD++ L Sbjct: 443 GIFLRCENE-NCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDLDEE 501 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG KSAQN++ A+E++K+ +R ++ LGI +G+ + LA YFGT++ L Sbjct: 502 TLVNLDRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIPHIGQKASEDLARYFGTMDKLSH 561 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+ EEL +P +G ++A + N+F +E+NR + +L +G+++ + + ++ +G Sbjct: 562 ATEEELLNLPFIGEIMARSIVNYFRKEANRRRLEKLRKKGLNFVSTL---SQASSGTLSG 618 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT V+TG+LS+ R+ +++ G +V+ S+S+KT ++ G GSKL +A++LGI +I Sbjct: 619 KTFVITGTLSE-PRESIAQKIISKGGRVSNSLSRKTSYLVVGSDPGSKLQEAKKLGIPLI 677 Query: 661 DEAEMLRLL 669 +E E+L +L Sbjct: 678 NEQELLEML 686 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/669 (42%), Positives = 422/669 (63%), Gaps = 12/669 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +Q++ +L T+ +H LY+ D PEI D EYD+L REL LE + PEL DSPT Sbjct: 3 IEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTN 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG L F + H + M SL NV +EE FL F+ R+Q L N K+ + E K DGLA Sbjct: 63 KVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKEL-NQSKIKYTVENKFDGLA 121 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + ++YE G L A+TRGDG GE++T+NV+ + +P + + +L VRGE + + Sbjct: 122 LELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEK---KKLIVRGEALITKKD 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N++ FAN RNAA+G LRQLD + KR L FF Y + + +L + + Sbjct: 179 FEALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEY- 237 Query: 241 GRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + ++F + G V + V A++VL Y+ ++E R + ++IDG+VIKV+ + QE+ Sbjct: 238 -KSMEFLSELGFTV-EGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEK 295 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LGF++RAPR+AVAFKF +E+ T ++++E QVGRTGA+TPVA+LEPV V GV VSN TLH Sbjct: 296 LGFLSRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLH 355 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EI+ +RIGD VV+ R+GDVIP++ VVL +R D++ FP CPVCG D + Sbjct: 356 NPNEIKSKDIRIGDTVVVIRSGDVIPKITRVVLEKRTADSKPFEFPKKCPVCGGDTAVTD 415 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 G+ + RC C ++ +++FVS+ AM+++ +G + I + V TPADL+K+T Sbjct: 416 GDVIVRCINEE-CPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITR 474 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L ERMG K A ++ ++E +K TT RF+YALGIR+VGE TA LA YF ++E + Sbjct: 475 DDLFKFERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFK 534 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A+I++LQ + +G + A +++F E +I +LLA GV+ P+ ++SP Sbjct: 535 KATIDDLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVN---PVFEKVVTVESPLT 591 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GK VV+TGS+ +R+ AK LGA V +VSK T+++I GE AGSKL KAQ+LG+E+ Sbjct: 592 GKNVVITGSIEGFTRNSAKEAAERLGATVQSAVSKNTNILIVGEKAGSKLKKAQDLGVEI 651 Query: 660 IDEAEMLRL 668 ++ E ++L Sbjct: 652 MEADEFIKL 660 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 301/705 (42%), Positives = 424/705 (60%), Gaps = 50/705 (7%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR L +H Y Y+++DAPEI DA +D+++ EL+E+E +P+L+TPDS TQRVG Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVGGYVSEQ 98 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F+ + H M S+D+ D + A+ +R +D L VT+ CELK+DGL V++ Y+NG Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGAG-NVTYTCELKIDGLGVALTYQNGT 157 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLH-------GENIPARLEVRGEVFLPQAGFE 182 V AATRGDGTTGED++ NVRTI+ +P+ L G + +EVRGEV++P+ F Sbjct: 158 FVRAATRGDGTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFV 217 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+A G FANPRNAAAGSLRQ DP++TA+R L F Y + + H+ Sbjct: 218 RLNEEADAEGRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIA-----DTDPLHVHS 272 Query: 243 LLQFKKW----GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 +F W G V+ V C + EV F + E R L +DIDGVV+KV+S QQ Sbjct: 273 QREFLDWLRSAGFSVNPNVARCATPAEVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQL 332 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LGF ARAPRWA+AFKFP +E+ T +R++ QVGRTG +TPVA +PV VAG ++ ATL Sbjct: 333 DLGFTARAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATL 392 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI R +R GD +++ +AGDVIP+VV VL +RP D+ + P CPVCGS V Sbjct: 393 HNIDEIRRKNVREGDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHE 452 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 +GE RC + C AQ KE L H+VSR MDVDG+GD+I+D+++ +H AD ++LT Sbjct: 453 DGEVAYRCV-SIDCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLT 511 Query: 479 AGKLTGLER--------------------MGPKSAQNVVNALEKAKETTFARFLYALGIR 518 + GL+ +G K+A+ ++ L K+K R L+ALGIR Sbjct: 512 VDDIAGLDTGRTYASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIR 571 Query: 519 EVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLA 578 VG++ +A F +++ L AS E++ + +G +A+ V F A N V+ L Sbjct: 572 HVGKSVGEVIAERFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAVLERLRQ 631 Query: 579 EGVHWPAPI-----------VINAEEIDS-PFAGKTVVLTGSLSQMSRDDAKARLVELGA 626 G+ + + E D+ P AG T VLTG+L +RD+A A L LGA Sbjct: 632 AGLSLEVDLGAAHAQAAADAGVAGELADAQPLAGLTFVLTGTLVNRTRDEAGAALKVLGA 691 Query: 627 KVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 KV+GSVSKKT ++AG AGSKL KA++LG+ V+DE + ++L + Sbjct: 692 KVSGSVSKKTSYLVAGPKAGSKLTKAEQLGVPVLDEDALEQILAT 736 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 297/661 (44%), Positives = 406/661 (61%), Gaps = 18/661 (2%) Query: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHE 76 +H + Y+V+D PE+ D EYDRL REL ELE++ PEL+T DSP++RVG A F+ +RH Sbjct: 26 YHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAPVRHA 85 Query: 77 VPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 VPMLSL+N F E F R++ L +++ + + E KLDGLAV ++YE G +T Sbjct: 86 VPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFTLGST 145 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RGDG GE+I++N++TI IP++L GE PARL++RGEV L AGF +NE + G + Sbjct: 146 RGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQNGESL 205 Query: 196 FANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE----GGELPDTHLGRLLQFKKWGL 251 FANPRNAAAGSLRQLDP I+A RPL FF YGV + G + L L FK + Sbjct: 206 FANPRNAAAGSLRQLDPAISAARPLEFFAYGVADADPLAVGSQQQVIELLAALGFKT--I 263 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 P LC V+A + ++ + R L ++IDG+V KVN LA Q++LG R PRWA+ Sbjct: 264 PHGH---LCPDLAAVIAHFQQLAQRRSQLPYEIDGMVAKVNELALQKRLGSKTRTPRWAI 320 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A KFPA + T + VE+QVGRTGA+TPVARLEPV V GV VS ATLHN EI R LR+ Sbjct: 321 AAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIRRKDLRL 380 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 D V+++RAG+VIP+VV + +R RE+ PTHCP CGS + R E V RC Sbjct: 381 EDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPECGSQLIRPAAEVVLRCPNHRH 440 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQR +L HF + +D++G+G K+++QL V D+F+L A +L L G K Sbjct: 441 CPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLAPLPGWGEK 500 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 A NV+ A+ + + R L ALGIR +GE TA LA FGTLE L AA E+ + Sbjct: 501 KAANVIAAVNRRRRVELGRLLAALGIRHIGEVTAQLLARRFGTLEGLLAAGEEDFLDIEG 560 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE---EIDSPFAGKTVVLTGS 608 +G A+ + +FA NR ++ +L E + I E E P + + TG+ Sbjct: 561 IGPQAAAALVTYFAAPGNREILRQLQEE-----LGLEIQPEGGPEQSQPLGDRVFLFTGT 615 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 LS SR +AKAR+ ELG +VA S++++ ++ G GSKL KA+E+G+ ++DE + RL Sbjct: 616 LSNWSRSEAKARVKELGGEVATSLNRRVTHLVCGSKPGSKLPKAREMGLTILDEEQFRRL 675 Query: 669 L 669 L Sbjct: 676 L 676 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 269/676 (39%), Positives = 424/676 (62%), Gaps = 13/676 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI-TPDSPT 59 M+ I+ + +L+ +R+H YLYH +++P+I D +YD L+ EL+ LE K + DSPT Sbjct: 1 MKDIKNYILKLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPT 60 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 Q VG+ L F + H PMLSL+NVF + FL F K++ + + EK+ +C ELK DG+ Sbjct: 61 QSVGSENLPEFKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNI-TVEKIFFCSELKFDGV 119 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A++++Y NG+L A TRG+G GED+TSNV I ++P KL G +IP LEVRGE+F+ ++ Sbjct: 120 AINLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIPETLEVRGEIFMLKS 179 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F+K+N + K+F+N RNAA+GSLR + ++T R LTF+CYG G D+H Sbjct: 180 DFKKLNVRLTKFKKKLFSNSRNAASGSLRHKNAKVTELRSLTFYCYGCGYCSYENFTDSH 239 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL + K WG P+SD L S +E+L FY+ ++ +R L F+IDG+VIKV+S+ Q+ Sbjct: 240 FLRLKKLKSWGFPISDYNFLHSSYDEILRFYNFIQNERYFLNFNIDGIVIKVDSICLQKS 299 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 L ++APRWAVA+KF + ++T + ++ +QVGRTG ITPVA++ P++++GVL+ +LH Sbjct: 300 LSTTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVAQVTPIYISGVLIKKVSLH 359 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EI RL L IGD V I+R+GDVIP ++ V + + ++ P CP CGS ++ Sbjct: 360 NFNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNEDISIPKFCPECGSKLKVDS 419 Query: 420 GEAVA-RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + RC GL C +Q K+ L +F S++ +++ G+G KIID+LV+ YV +D+F L Sbjct: 420 FSNIKIRCMAGLKCLSQFKKLLHYFCSKKGLNILGLGPKIIDKLVDLGYVSDLSDIFDLN 479 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 LT +E +G +QN++ ++ +K +F++FL +LGI EVG A ++ YF TL+ Sbjct: 480 VSLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGIFEVGSIVARSISNYFFTLDKF 539 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +S EE + +G+ +A +++NF +E N+N+I + L++ ++ + I + ++ F Sbjct: 540 MNSSKEEFLLINGIGVNIADNLYNFINDEFNKNIIFK-LSKKLNISSDINAIIDNNNTLF 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVA----GSVSKKTDLVIAGEAAGSKLAKAQE 654 K +V +GS S SR ++++EL K+ SVSK D +I G+ G KL KA++ Sbjct: 599 R-KKIVFSGSFSNFSR----SKIIELSKKLGIIVVSSVSKSVDYIIIGKKPGRKLIKAKK 653 Query: 655 LGIEVIDEAEMLRLLG 670 I I E E L ++ Sbjct: 654 FSIPGIYEKEFLNIIN 669 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 290/667 (43%), Positives = 409/667 (61%), Gaps = 8/667 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I ++ ELR LR+H YLY+V+D PEI D E+DRL R L +LE ++PE++TPDSPTQRVG Sbjct: 6 IIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSPTQRVG 65 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F +I + PMLSL N F E F++RV + V + ELK+DGL++++ Sbjct: 66 GKASDDFRKIPFKKPMLSLANAFSAEELRDFDRRVHGGI-GAMPVEYITELKIDGLSMNL 124 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +YENG L+ TRGDG GED+TSNV+TI+ IPL + EN PA +EVRGEV++P+ F Sbjct: 125 IYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYI--ENAPAYMEVRGEVYMPRKSFIA 182 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE+ G FAN RNAAAGSLRQLDP++TA R L FF Y +G EG ++ + L Sbjct: 183 LNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDI-SSQDDLL 241 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 LQ KK+ V+ +S E V+ + E+ R L +D DG+VIKVN QQE LG Sbjct: 242 LQLKKFHFRVNPHYRKWDSIEGVITGVREWEKKRRELDYDTDGMVIKVNDFRQQELLGAT 301 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 + P+WA+A+K+P +E +T + + +GRTG +TP A L PV +AG V ATLHN D Sbjct: 302 GKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRATLHNLDF 361 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I +R GD V+I +AG++IP++ V+ +R +E P +CPVCG+ + R++ EA Sbjct: 362 IREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIRRIDTEAA 421 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 RC CG +E L HF SR AMD++G+G ++D L+ V AD + L L Sbjct: 422 FRCINP-ACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYALKEDDLR 480 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 +ERMG KSA N++ A+ +KE A+ L+ LGIR +GE + A YF T++A+ AA + Sbjct: 481 QIERMGEKSAANLITAIRASKERGLAKLLFGLGIRFLGEKGSELAAHYFHTIDAIMAADV 540 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 E +++ +G + A ++++F +E N +I++L GV I E F+G++V Sbjct: 541 ETIEETEGIGKITAKSLYDYFHDEKNIEMINKLKNAGVLMEE---IKEESESGMFSGESV 597 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 VLTG L+ M R +A + LG SV+ T LV+AGE AGSKL KA+ GI VIDE Sbjct: 598 VLTGKLAVMGRREASELIKRLGGTTQSSVTNITTLVVAGEDAGSKLEKARAKGIPVIDEQ 657 Query: 664 EMLRLLG 670 E L+ G Sbjct: 658 EFLKRAG 664 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/670 (42%), Positives = 411/670 (61%), Gaps = 16/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I++++ +LR+ + +H LY+ +D EI DAEYD L L+ LE +P+ SPTQ Sbjct: 1 MDKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 ++G A F+ + H M+SLDN + E L +++R L + E K+DG++ Sbjct: 61 KIGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHGN-FEMVAEAKIDGVS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YE GVL AATRGDG TGED+T+N++TI+ IP H + ++E+RGE+++ +A Sbjct: 120 CSLTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIP---HNISFKNKIEIRGEIYIEKAD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 +++NE G +FAN RNAAAGS+RQ + I+A RPL FF + G G++ Sbjct: 177 LKRLNEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGY---GDVDVKGF 233 Query: 241 GRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + K WG V+ E+ +FY + EE R L +D+DG+V+K+NS A+Q+ Sbjct: 234 AEFMDLCKSWGFSVTPNRIRTADINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKI 293 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG A++PRWA+AFK+ + T V + F VGRTG ITPVA LEPV VAGV++SNATLH Sbjct: 294 LGVTAKSPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLH 353 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+RLG++ GD V++ RAG+VIP+++NVV + EV P +CP CGS V R E Sbjct: 354 NFDEIKRLGVKEGDTVIVERAGEVIPKILNVV---KDGGGNEVKAPKNCPSCGSKVYRYE 410 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E RC C AQ K L HFVSR AMD+DG G+ +++Q+VEK+YV AD++ L A Sbjct: 411 DEVAIRCINPA-CPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKA 469 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L+ K N++ A+E +K+ + +R LYA GIR VG+ T LA +F +E + Sbjct: 470 EQLLTLDLFKDKKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENML 529 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AAS+E+ QK+ ++G VV V++F + I+ L GV++ P V + + Sbjct: 530 AASLEDFQKINEIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQPKV---QLAGNELL 586 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT+V TG L+ M R A+A G KV+GSVS KT V+AG AGSKL KAQ LG+ V Sbjct: 587 GKTLVFTGELN-MPRTQAEALAKAHGGKVSGSVSSKTSYVVAGADAGSKLTKAQSLGVSV 645 Query: 660 IDEAEMLRLL 669 I E E L L+ Sbjct: 646 ISEEEFLNLI 655 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 291/685 (42%), Positives = 412/685 (60%), Gaps = 18/685 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++++ ELR L + Y+V+DAP++ D+ YDRL REL +LE HPEL+ DSPTQR Sbjct: 5 QGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-------KVTWCCEL 114 VG +P F + H +P+ SLDN F E + R+ L + EL Sbjct: 65 VGGSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGEL 124 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG A+++ Y+NGVLV AATRGDG GEDIT+NVRTI +IPL+LH + PA +EVRGE Sbjct: 125 KIDGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGEA 184 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE--G 232 +P F IN + +FANPRNA AG+LRQLDP++ A R L FF Y + + E Sbjct: 185 LIPDNTFAAINSERAARDEPLFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPEDWS 244 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 GE P + L + G V+ L + V F+ + R L + DGVV+K+N Sbjct: 245 GERPTSQWESLRWLEDAGFRVNPNAALLPDVDSVEQFFGDWDSRRHDLNYATDGVVVKLN 304 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L Q+ GF +APRWA+A K+PA+E + + + QVGRTG +TPVA EPV +AG Sbjct: 305 DLRLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLAGTS 364 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS ATLHNAD ++ L L GD +++R+AG++IP+V+ V+ RPE + P CP CG Sbjct: 365 VSRATLHNADRLQELDLHSGDTIIVRKAGEIIPEVLRVLPELRPEGALPLELPQQCPSCG 424 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 SD+ R GEA RC C A +L+H+VS+ A+DVDG+G K+I+QLVE+ V + A Sbjct: 425 SDLVRESGEAATRCVNS-SCPAILSGALRHWVSKGALDVDGLGSKLIEQLVERGLVRSIA 483 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL++L LT LERMG KSA N+V AL +++ ++R LY LGI VGE A LA+ F Sbjct: 484 DLYRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGIHHVGEVNAKALASAF 543 Query: 533 GTLEALEAASIEELQKVPD---VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP--- 586 +L A+++ + + D +G +A + +F +N++++ +L A G+ A Sbjct: 544 ADAHSLADAAVQRPEAITDLHGIGPEIAQSLQQWFNTSANQDLLQQLRAVGLTLAASDQE 603 Query: 587 --IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 + + G+T VLTG+L +SR A+A + G KV+GSVSKKT V+AG+ Sbjct: 604 RQALADRNNGKGHLNGQTFVLTGTLPSLSRSQAQALIEGAGGKVSGSVSKKTSFVVAGDE 663 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLL 669 AGSKL KA LG+ V+DEA ++ L+ Sbjct: 664 AGSKLDKANTLGVSVLDEAALMLLI 688 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust. Identities = 321/741 (43%), Positives = 430/741 (58%), Gaps = 81/741 (10%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +++ E + L + Y+ DAP I DAEYD R L E+E + P+L SPT Sbjct: 30 VKAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSPTA 89 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDG 118 +VGAAP F+++ H +PMLSL+N F + AF +RV+ L + + E K+DG Sbjct: 90 QVGAAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKIDG 149 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L++S+ YE G LV AATRGDG GE++T+N RTI IP +L G+ P LE+RGE ++ Sbjct: 150 LSLSLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYMSH 209 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 FEK+N+ G+VFANPRNAAAGSLRQLDP +TA RPL FF Y G + T Sbjct: 210 EDFEKLNQS---ETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVSA-SFAGT 265 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 + + + + +G + +C S E+L+ + ++E+ R TLG+DIDGVV KVN LA Q Sbjct: 266 QMEAVRRMQAFGFQTNPLTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQA 325 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG + PRWA+A KFPA+ T + ++ QVGRTGA++PVARL PV V GV+VSNATL Sbjct: 326 RLGMRSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATL 385 Query: 359 HNADEIERLG-----------LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 HN D I G +RIGD V + RAGDVIP+V +V L++RP + FPT Sbjct: 386 HNEDYIAGRGADGSEIRGGKDIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTT 445 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CP CGS R EG++V RCTGGLIC AQ E L+HFVSR A D++G+G K++++L + Sbjct: 446 CPECGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGW 505 Query: 468 VHTPADLFKLT----AGKLTGL---ERMGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 + PAD+F L G+LT L E G KSA ++ A+EK +E AR L+ALGIR V Sbjct: 506 IAEPADIFTLQDRYGPGQLTQLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGIRHV 565 Query: 521 GEATAAGLAAYFGTLEALE----------------------------------------A 540 GE A LA ++G+ EALE A Sbjct: 566 GEVAAQDLARHYGSWEALEIALDTARPAALAHRVAEDAALAEREAARAEGRRARPSEARA 625 Query: 541 ASIEELQKVPD-------------VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 A++ ++ P+ +G V+A + + FA E R I L++ P Sbjct: 626 AALAQVDLSPEATAAWTGLIAADGIGPVLAMSLSDAFANERERAAIDRLVSFLTVLPP-- 683 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 A DS AGKT+V TG+L +M+R +AKAR LGA VAGSVS KTDL+IAG AGS Sbjct: 684 --EARATDSAIAGKTLVFTGTLEKMTRAEAKARAEALGAHVAGSVSAKTDLLIAGPGAGS 741 Query: 648 KLAKAQELGIEVIDEAEMLRL 668 K KA ELGI+VIDE E L + Sbjct: 742 KAKKAAELGIKVIDEDEWLAI 762 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 282/664 (42%), Positives = 421/664 (63%), Gaps = 7/664 (1%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ ELR LR HEY Y+V+ +P I D EYD +M++L ELE ++PE +PDSPT RVG+ Sbjct: 10 RIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGSDK 69 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 F+ +RH+ PMLSL N ++ + F +RV + L+ ELK DGL++S++YE Sbjct: 70 TEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQG-APFEIVAELKFDGLSISLIYE 128 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 +G+LV A TRGDG G+D+T+NVRTIR++PL+L G++ P LEVRGE+ LP F++IN Sbjct: 129 DGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEFDRINA 188 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 G +FANPRNAA+G+++QLDP I A R L + Y + E L + H RL+Q Sbjct: 189 QREAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDE--PLAENHYDRLMQA 246 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 ++WG VSD VTLC S E+V AF + + +R TL DG+V+KVN+ AQQ+ LGF A++ Sbjct: 247 RQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQDLLGFTAKS 306 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWA+A+K+ A+ T ++ V +QVGRTGA+TPVA L+PV ++G +V A+LHNAD I Sbjct: 307 PRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLHNADFIAE 366 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 L GD V + + G++IP++V V R D R +VF CP C + + R +GEA C Sbjct: 367 KDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQGEAAYYC 426 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 C Q+K L+H+ R+A D++ +G + I+ L + + AD + LT +L L Sbjct: 427 PNAEGCPQQQKGRLEHYCGRKAADIN-IGPETIELLYSRNMIRNVADFYALTEEQLLTLP 485 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 ++A +++++E +K + L+ LGIR VGE A LAA + +++AL AA+ EEL Sbjct: 486 GFKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDALAAATSEEL 545 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLT 606 ++ ++G +A+ V +FF+ NR +I L GV A V + + + AGKTVV++ Sbjct: 546 VQIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEAETV--SVPVSARLAGKTVVIS 603 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEM 665 G+ + SRD+ KA + + G ++AGSVS KT ++AG G SK KA++LG+ ++ E E Sbjct: 604 GTFEKYSRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGPSKREKAEKLGVRLMSEEEF 663 Query: 666 LRLL 669 LRL+ Sbjct: 664 LRLI 667 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 312/675 (46%), Positives = 425/675 (62%), Gaps = 15/675 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ ELR +R+H + Y+V+D PEIPDAEYD L REL+ELE ++P L DSP+++ Sbjct: 12 EQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADSPSRQ 71 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA PLA F+ + H +PMLSL+N F+E F R+ L ++ E KLDGLAV Sbjct: 72 VGAEPLAQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPKLDGLAV 131 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIP--LKLHGENIPARLEVRGEVFLPQA 179 ++YE+G+ +TRGDG TGE+IT+N+ TI IP LK G PARLE+RGEV L Sbjct: 132 ELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGEVCLSIT 191 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 GF+++N G +FANPRNAAAGSLRQLDP ITA RPL FF YG + L T Sbjct: 192 GFKELNRRRGEAGESLFANPRNAAAGSLRQLDPAITADRPLEFFAYGAA--DSAALAVTT 249 Query: 240 LGRLL-QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 +LL Q +GL + +C E LA + ++E R + ++IDG+V+KVN LA Q+ Sbjct: 250 QAQLLEQLHAFGLQLIPHGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLKVNDLALQK 309 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG AR+PRWAVA KF A + T + VEFQVGRTGA+TPVA LEPV V GVLVS ATL Sbjct: 310 RLGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGVLVSRATL 369 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI+R LR+ D V+++RAG+VIP+VV V +R D + + P +CP C + R Sbjct: 370 HNEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPANCPECDHALIRK 429 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGEAV RC C AQR SL HF S+ +D+DG+G K ++ LV+ V D+++L Sbjct: 430 EGEAVRRCPNPQ-CPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLVGDIPDIYRLR 488 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L L G KSA V +A+ AK AR L ALGIR VGE A LA +F +LEAL Sbjct: 489 PEQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVLARHFPSLEAL 548 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-- 596 + A E+ +V +G VA+ + FF + + ++++L G + I+ EE + Sbjct: 549 QQAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELG------LTISPEEQPAQQ 602 Query: 597 -PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 P + + TGSL+ MSR++AKAR+ ELG +VA +++K ++ G+ GSKL KA+EL Sbjct: 603 LPLQNRVFLFTGSLAGMSRNEAKARVKELGGQVATGLNRKVTHLVCGDKPGSKLTKAREL 662 Query: 656 GIEVIDEAEMLRLLG 670 +E++ EA+ RLLG Sbjct: 663 ELEILTEADFARLLG 677 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 538 bits (1385), Expect = e-151, Method: Compositional matrix adjust. Identities = 281/693 (40%), Positives = 425/693 (61%), Gaps = 36/693 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S ++Q+ LR LR H Y Y+V D P I D E+D+ + +L+ LE HPE SP+ RV Sbjct: 2 SPKEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSPSVRV 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ I+H M SLDN + E + KR++ ++ + E + + CELK DG ++S Sbjct: 62 GGEVTKNFNTIKHINRMYSLDNSYSIEDLRDWEKRIK-KIVDGE-IQYTCELKYDGASIS 119 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG V A TRGDG G+++T+NVRTI+++PL+L G+++PA+ E+RGE+ LP GF Sbjct: 120 LHYENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDGFH 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLG 241 K+NE+ G ++ NPRN A+GSL+ D AKRPL Y L G LP + Sbjct: 180 KMNEERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQ---LAGENLPVKSQFD 236 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L +KWG L S EEV F + + R L ++ DGVVIKVNSL QQ++LG Sbjct: 237 SLTLARKWGFKAPQESKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F A+AP+WA+A+KF A++ T + ++ +QVGRTG+ITPVA LEPV ++G V A+LHNA Sbjct: 297 FTAKAPKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNA 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+IE+L +R+GD+V + + G++IP++V V L++RP+++ V+ THCP C +++ R EG+ Sbjct: 357 DQIEKLDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGD 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A C + C Q K ++HF+SR+AMD+DG+G + + QLV+ +++ ADL+ LT + Sbjct: 417 AKHYCPNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQ 476 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL--- 538 + LERM KSA+N++N +E +K+ F R L+ LGIR VGE A LA ++ ++AL Sbjct: 477 VLPLERMAQKSAENMINGIEASKQVPFERVLFGLGIRYVGETVAKKLAKHYKNVDALLNM 536 Query: 539 ----EAASI--------------EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 + +SI EEL VP++G +A + F E +I L G Sbjct: 537 PAEPDKSSIDLFADVSSAADKKMEELTAVPEIGESIAQSLVEFIQNEDQMAIIERLKNTG 596 Query: 581 VHWPAPIVINAEEID---SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD 637 + + ++ E+++ AGK+ V++G +MSR+D K + + G K + S+S KTD Sbjct: 597 LQF----ALSEEQLEGQTDKLAGKSFVISGVF-EMSRNDLKKLVEDNGGKNSSSISSKTD 651 Query: 638 LVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 +I G+ G SKL KA++LGI +I E E L ++ Sbjct: 652 YLIRGDKMGPSKLEKAEKLGITMISEQEFLAMI 684 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust. Identities = 300/658 (45%), Positives = 400/658 (60%), Gaps = 9/658 (1%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 LRHH Y Y+V+DAP + DAEYDRL ++L+ LE ++P L TPDSPT +VG + Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVT 91 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H PMLSL V++E+ F + ++ L E VT+ E K DGLAV ++YE+G LV A Sbjct: 92 HPAPMLSLKAVYEEDEVRNFAETCREEL-GRETVTYIAEPKFDGLAVELIYEDGRLVQGA 150 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEVFLPQAGFEKINEDARRTG 192 TRGDG TGE+IT+NV+TI+ +PL+L + +P RL VRGE ++ + F N G Sbjct: 151 TRGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRREEEG 210 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLP 252 KVFANPRNAAAGSLRQLD ITA+RPL + Y + ++G + TH L +WGL Sbjct: 211 KKVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDGRDFA-THAEVLEALPEWGLR 269 Query: 253 VS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 V D + C+ + LA + + + R L ++IDG+VIKVN E LG R PRWA Sbjct: 270 VCEDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPRWAA 329 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A+KFP + T + D+ QVGRTG ITPVA L PV V GV V+ A+LHN +EI+R +RI Sbjct: 330 AYKFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRI 389 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 GD V+I RAGDVIPQVV V+ ER P CPVCGS+V + + A CTGG+ Sbjct: 390 GDTVLIERAGDVIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTGGMT 449 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQ +E LKH+ SR A D++G+GDK +QL++ + T +DL++L L LER K Sbjct: 450 CPAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERYADK 509 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 SAQN+++ +E + E RFLYALGI VG ATA LA +F TL+AL A + L + D Sbjct: 510 SAQNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHFDTLDALVDADEDALTTIDD 569 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G VA + FFA+++NR VI E+ G+ P +A ++ G T V TGSL Sbjct: 570 IGPEVAHSIATFFADDANRGVIDEMRDAGLTLTNPYAEDAARLE----GLTFVFTGSLEG 625 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +R + + + GA SVS TD V+AG AGSK A + GI V+DE LL Sbjct: 626 WTRSAVQRFVEQHGANATSSVSGNTDYVVAGPGAGSKRDDADDRGIPVLDEDAFHALL 683 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 302/661 (45%), Positives = 396/661 (59%), Gaps = 8/661 (1%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL L H Y Y+V+D+P + DAEYDRLMREL LE HPEL TPDSPTQ+V + Sbjct: 65 ELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKVAGSYSTL 124 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F+ + H +LSLDNVFD++ F + R + E W CELK+DGLAV ++YE G Sbjct: 125 FTPVEHLERLLSLDNVFDDDEFHLWAARAA---RETEVDGWLCELKIDGLAVDLVYEEGR 181 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 LV AATRGDG TGEDIT N+RT+ ++P +L G ++P LEVRGEVF P F ++N Sbjct: 182 LVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPTEKFAELNASLV 241 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 GGK FANPRNAAAGSLRQ DPR+TA RPL +G+G G + + +F ++ Sbjct: 242 AGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGLGAQRGFDAA-SQSAAYARFAEF 300 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 GLPVS + S +VLAF H+ R + +IDGVV+KV++ A Q +LG ++APRW Sbjct: 301 GLPVSTHFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQRRLGSTSKAPRW 360 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 AVAFK+P +E T +RD+ VGRTG +TP LEPV VAG V ATLHN DE+ R G+ Sbjct: 361 AVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATLHNVDEVGRKGV 420 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 IGD VV+R+AGDVIP++V V+ R R V PTHCP CG+++ R EGE RC Sbjct: 421 LIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRPEGEVDIRCPNT 480 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 C AQ +E + H SR A+D+DG+G + L+E + V D+F LT GL G Sbjct: 481 DACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHLTPESFEGLRGFG 540 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 K ++ +E A+ R L L IR VG A LA +L+A+ AA E+L V Sbjct: 541 QKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARALARELRSLDAIAAAPAEQLAAV 600 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 VG +AS V ++FA+ +R++++ + A G A E P G VV+TG+L Sbjct: 601 EGVGPKIASAVVDWFADARHRDIVARIAAGGASLAD---AGAAEGPRPLDGVAVVITGTL 657 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRL 668 SRD A + G KV GSVSKKT V+ G G +K KA+ LG+ V+DEA L Sbjct: 658 DGWSRDSATEAVQGRGGKVTGSVSKKTAFVVVGADPGAAKYDKARSLGVPVLDEAGFAVL 717 Query: 669 L 669 L Sbjct: 718 L 718 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust. Identities = 302/673 (44%), Positives = 416/673 (61%), Gaps = 27/673 (4%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 IE+ LR L Y Y+V+DAPE+ DA YD+ REL +LE+++PEL++PDSPT+RVG Sbjct: 9 IEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRVG 68 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 P +AF + H VPM SL+N F + + +R+ + + + CELK+DG A ++ Sbjct: 69 ERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAI--GPGLEFICELKIDGSATAL 126 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YE+GVLV ATRGDG GE+IT N+RTIRAIPLKL G +PA LEVRGE F+P+ FE+ Sbjct: 127 SYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEFER 186 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR- 242 IN++ + G K+FANPRNA AG+LRQLD R+ A R L FF Y H GR Sbjct: 187 INQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAY-----------TAHYGRA 235 Query: 243 ------LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 L + + G V+ +LC EV F E R L +D DGVV+KVN+ Sbjct: 236 ESQWEALAELESHGFRVNPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDH 295 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q ++GF ++ PRWA+AFK+PA+E+ T V + QVGRTGA+TPVA L+PV VAG VS A Sbjct: 296 QREVGFTSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRA 355 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN D IE L +R+GD V+IR+AG++IP+VV V+ RP + VFP CP CG+ V Sbjct: 356 TLHNQDRIESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVV 415 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GEA RC C A + L H+ + A+++DG+GDK+I +LV VHT ADL++ Sbjct: 416 RAPGEAAVRCPNPR-CPALIRGKLGHWCA--ALEIDGIGDKLIARLVSLGLVHTVADLYE 472 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 L+A +L GLER+G +SA +V L+++ ++R LY LG+R +G + + LA F + + Sbjct: 473 LSAEQLAGLERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASAD 532 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL A + + + G +A V +FA+ NR ++ L A G+ S Sbjct: 533 ALARADLAAIASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQLAGG---GRAAQSS 589 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AG T V+TG+L +SR++ A + G KV SVS +T V+AGE AGSKLA+AQ+L Sbjct: 590 ALAGLTFVITGTLPTLSREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLK 649 Query: 657 IEVIDEAEMLRLL 669 + V+DE E LR L Sbjct: 650 VAVLDE-EQLRAL 661 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 299/668 (44%), Positives = 416/668 (62%), Gaps = 19/668 (2%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +Q++ ELR L Y Y+V+D P + D EYDR +EL +LE + P+ P+S TQRVG Sbjct: 3 QQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L AF ++ H+ MLSLDN F+ E +AF++RV+ +KN E + ELK+DGLA+S+ Sbjct: 63 VVLDAFEKVSHKRRMLSLDNAFNLEDLMAFDERVRQSVKNPE---YVVELKMDGLAISLH 119 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y NG V A TRGDG GED+T+NVRTI +IP+ + ++ LEVRGEV +P+ FE + Sbjct: 120 YHNGRFVQAVTRGDGLVGEDVTNNVRTIASIPMHI---DMEGDLEVRGEVIMPKKSFEAL 176 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE--LPDTHLGR 242 NE R+ G + FANPRNAAAGS+RQLD RI A R L + Y EG + TH Sbjct: 177 NEQRRKQGEEEFANPRNAAAGSIRQLDSRIAASRKLDAYLY---YFEGAQQHAMHTHEEA 233 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + + V+ +C++ +EV F ++ E R L ++IDG+V+KVN L + LG Sbjct: 234 LEALEAMRIKVNPLRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGT 293 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A+APR+A+A+KFPA+E +T + D+ VGRTG ITP A LEPV VAG VS ATLHN D Sbjct: 294 TAKAPRYAIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTTVSAATLHNED 353 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV-FPTHCPVCGSDVERVEGE 421 I+ +RI D V+IR+AGD+IP+VV L ER T+ + FP CP CGS + R E Sbjct: 354 MIKEKDVRINDDVIIRKAGDIIPEVVR-SLPERRNGTQGIYKFPQICPFCGSKLVRFADE 412 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A C C A+ + HF SR AM++D +GDK I+ ++ +++T D+++L+ K Sbjct: 413 AAHYCMNQ-DCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNTIEDIYELSLHK 471 Query: 482 --LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LE KS Q ++ A+E +KE L+ LGIREVG+ A LA +G ++ L Sbjct: 472 EEILALEGFQEKSFQKMILAIEASKERPLEDLLFGLGIREVGKKAARVLAKTYGNIDDLM 531 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AA EL + D+G+V A + +FAE N+ +I+ L G+ + E I F Sbjct: 532 AAEEAELTAIKDIGVVTAQSIRAYFAEPKNKELIAHLKGFGLRMDTDKEVIKESI---FT 588 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTG+L + R++AKA L LGA V+GSVSKKTDLVI GEA+GSKL+KA+ELG+ Sbjct: 589 GKTVVLTGTLQYLKRNEAKALLERLGANVSGSVSKKTDLVIYGEASGSKLSKAKELGVAT 648 Query: 660 IDEAEMLR 667 +DE ++ Sbjct: 649 MDEEAFMK 656 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 252/588 (42%), Positives = 383/588 (65%), Gaps = 12/588 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ LR L + EYLY+V ++ D EYD L+ ELR+LE K+P LIT S TQ Sbjct: 1 MKLIKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-----WCCELK 115 + + ++IRH+ PMLSL+++ D+ L F+KR++ +L N+ + +CCELK Sbjct: 61 SISNVCDNSLNRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELK 120 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRG 172 +DG+A+SILY+ G LV AATRGDG GE++T NV I +IP L N +P LE+RG Sbjct: 121 IDGVALSILYKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKNNNEILPDLLEIRG 180 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E+F+ + F K+N++ +G KVF+N RNAA+GSLRQLDP +T R L F CYG+ G Sbjct: 181 EIFISKLSFSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAG 240 Query: 233 -GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 +LP++H GRL +WGL +++ + + + VL +Y+ V + R L + IDG+VIK+ Sbjct: 241 LKQLPNSHWGRLKLCNRWGLSINNYIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKI 300 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 ++ Q+QLG RAP WAVA+KFPA+ ++T + DV F+VGRTG ITP+A + PV + V Sbjct: 301 DNCIYQDQLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNV 360 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 ++ +HN +E++RL L IGD V+++R+GDVIP+++ ++L R ++ + + P CP C Sbjct: 361 IIKKVNMHNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSC 420 Query: 412 GSDVERVEGE--AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 GS + +VE +V RC L C AQRK +LKHF SR+AM++ GMG ++I+QLV+K + Sbjct: 421 GS-ILKVEDNKSSVLRCLAKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLIC 479 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 TP D F L+ KL L+R G KSA+ ++ ++ AKE T + F+YALGI VGE+ + LA Sbjct: 480 TPVDFFSLSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLA 539 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL 577 + T+E L A ++ ++ +G + A ++++F + N N I L+ Sbjct: 540 YMYRTIENLMNADLQSFLQLKFIGKIAAMNIYSFLHQSDNYNNIQGLI 587 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/669 (41%), Positives = 406/669 (60%), Gaps = 7/669 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+I+Q++ LR + H Y Y+ +D P I D E+D ++EL++LE + PE +SPT R Sbjct: 3 ENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTLR 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F ++H+ M SLDN +D + KR++ L NE V + ELK DG ++ Sbjct: 63 VGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTL--NEPVEFVAELKYDGASI 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SILYENG L A TRGDG G++ITSNV+TI IP++LHG+ P R +RGE++L F Sbjct: 121 SILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHGD-FPERFFMRGEIYLTHQNF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ G F NPRN A+GSL+ D KR L+ Y + TH Sbjct: 180 EKINKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLYQF--ISENTAAQTHWE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + K WG +SD+ LC +EV AF + +E+R TL FDIDG+V+KVN LAQQ LG Sbjct: 238 LLQKAKSWGFRISDQAKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDLAQQRVLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A++PRWA+A+K+ A++ T ++ V +QVGRTGAITPVA L+PV +AG +V A+LHN Sbjct: 298 YTAKSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVKRASLHNE 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +LGL D V + + G++IP++V V L++R E+ + +CP C + + RVE + Sbjct: 358 DIIRKLGLYEHDFVYVEKGGEIIPKIVGVNLAKRNPANAEIQYIKNCPECSTALIRVEDQ 417 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C L C Q + H+VSR+A++++ +G + I+QL ++ V PAD + LT + Sbjct: 418 AIHFCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LERM KSAQN++ +EK+KE F + L+ +GI+ VGE A L F +++ L+ A Sbjct: 478 LLPLERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKNFNSIDDLKNA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + EL +V D+G+ +A + FF N +I L + GV + E + + GK Sbjct: 538 TAAELVQVEDIGLKIAESITEFFKNPENVLMIERLKSYGVKLEKGADTH-EVLSNALDGK 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVI 660 T + TG LS +RDDA+ + + G K +VSK D ++ GE AGSKL KAQE+G I ++ Sbjct: 597 TFLFTGKLSLFTRDDAEEMVEKHGGKNISAVSKNLDFLVVGEKAGSKLKKAQEIGTITIL 656 Query: 661 DEAEMLRLL 669 DE + L LL Sbjct: 657 DEQQFLDLL 665 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/678 (42%), Positives = 414/678 (61%), Gaps = 25/678 (3%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI--TPDSPTQR 61 I+++ +LR + +H LY+ D P I D EYD LMREL++LE ++PEL+ + +SPT++ Sbjct: 26 IQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSPTKK 85 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQ-------DRLKNN-EKVTWCCE 113 +G FS++RH PMLSL N ++ F+KRV+ D KNN E + + E Sbjct: 86 IGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNNDENLEYILE 145 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGE 173 LKLDGL++S++YENG LV A TRGDG GED+T N+R I +IP KL P LEVRGE Sbjct: 146 LKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKD---PVSLEVRGE 202 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG 233 + LP + F +IN++ G VFANPRNAA+G++RQLD I A R L + Y + E Sbjct: 203 IILPISNFNRINQEREDDGEDVFANPRNAASGTIRQLDKTIVADRGLDCYLYYLVNAENY 262 Query: 234 ELPDTHLGRLLQFKKWGLP---VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 + +THL + K G V ++ T E+ + +H + R TL ++ DG+VIK Sbjct: 263 GI-NTHLESIEYIKNLGFQTTGVFEKYTDFTELEKSIDKWH---DKRKTLDYETDGLVIK 318 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VN+ A E LG+ ++PRWA+A+KFPA++ T + DV FQVGRTG ITPVA LE V+++G Sbjct: 319 VNNFALYETLGYTTKSPRWAIAYKFPAEQVKTKLTDVTFQVGRTGVITPVAELEAVNLSG 378 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPV 410 +V A+LHN DEI R ++IGD V++ +A ++IPQVVNVV +R E+ PT+CPV Sbjct: 379 SVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPTNCPV 438 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 C S++ EG +C L C + K + +FVSR AM++ G+GDKI+++ +E + T Sbjct: 439 CNSELSHEEGLVALKCHNPL-CPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIELGKIKT 497 Query: 471 PADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D++ L + L LE+MG KS N++N++E +K F++ LYALGI VG+ A L Sbjct: 498 IVDIYSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPFVGKFNANLL 557 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 F +E L+ SIE L V +G VA V+ F +E+N +I++L G+ + A Sbjct: 558 TKTFKNIENLKNQSIENLLAVKGIGDKVAVAVNTFLNDENNWKIITDLQNIGLQF-AIDE 616 Query: 589 INAEEI-DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 N E+I D+P K + TG L + R+D K ++ G VSK D +IAGE AGS Sbjct: 617 TNLEKIADNPIKDKNFLATGKLQKYKRNDIKDIILSKGGNYLSVVSKNLDFLIAGEKAGS 676 Query: 648 KLAKAQELGIEVIDEAEM 665 KL KA++LGI V+ E + Sbjct: 677 KLEKAEKLGIRVLTEEDF 694 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/660 (43%), Positives = 408/660 (61%), Gaps = 15/660 (2%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL L ++ Y+V D P + DAEYD+L EL +E + P +I+ DSP+QRVG P+ Sbjct: 5 ELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPVTG 64 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 + HE+ +LSL N + E F + + D E V E K+DG A+ + YE+G Sbjct: 65 LENVTHEIKLLSLSNAYSREELEKFVENIWDEYPGAEIV---VEPKIDGAAMVLTYEDGK 121 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 LV ATRGDGTTGED+T N+RTIR++PL++ R+ +RGEVF+P A FE++N Sbjct: 122 LVRGATRGDGTTGEDVTHNIRTIRSLPLEIEK---SGRMIIRGEVFMPVASFERLNRLKG 178 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 G K+FANPRNAAAG+L+ LD + +R L F YG+ + GG + HL + K Sbjct: 179 EKGEKLFANPRNAAAGTLKLLDSKTAYERGLDVFLYGMDM--GG--TEHHLKDMELMKSL 234 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G +++ + E++ A + R +L +DIDG VIKV+S A Q LG ++P+W Sbjct: 235 GFNINEMTRKFNNFEDIWAHVEYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSPKW 294 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+K+PAQE +T +RDV+FQVGRTG+ITPVA+LEPV +AG +SNATLHN DEI RLG+ Sbjct: 295 AIAYKYPAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARLGI 354 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 +IGDKV IR+ GD+IP+VV ++ ER R++ F ++CPVC S +++ E + +C Sbjct: 355 KIGDKVTIRKGGDIIPKVVRPIIDERDGSERDIEFLSNCPVCQSKLQKEETDINRKCINP 414 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 +C AQRK L HF SR+AMD+ G G+ ++++LV+ +H AD+++ L + G Sbjct: 415 -VCPAQRKLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDGYG 473 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 KS Q + A+E +K+ F + LY LGIR VGE TA LA YFG ++ L +A E L V Sbjct: 474 EKSVQKLHEAIENSKKKPFDKVLYGLGIRHVGERTAQVLAEYFGDIDKLVSADEEALVNV 533 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 D+G A + N FA + N+I+ L G+ + A E+ GKT V+TG+L Sbjct: 534 RDIGSETAGAIVNSFANDDLSNIINRLKKSGLCFTAE---KKEKASDVLNGKTFVVTGTL 590 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 S + RD K + G KV +VS K D ++ GE AGSKL KAQ+LG+ +IDE+ + ++L Sbjct: 591 S-LPRDYFKKVIESNGGKVLSAVSGKLDYLLVGENAGSKLEKAQKLGVAIIDESGLTKML 649 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 282/667 (42%), Positives = 402/667 (60%), Gaps = 4/667 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S Q EL + H Y+V P I D E+D LM +L ++E +HPE I+ SPTQRV Sbjct: 5 SSHQSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F + H PMLSL N + ++ F RV+ +L ++ V + CELK+DG+A+S Sbjct: 65 GEMLTEGFQTVAHRTPMLSLANSYSKDEVQDFIHRVK-KLTRSQDVAFSCELKMDGIAIS 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +E G+ V TRGDG G+DIT N+RT+ A PL+L G + P LEVRGE+F+P+ F+ Sbjct: 124 AQFEKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEIFMPKQVFQ 183 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N + G ++ANPRNAAAGSL+ LDP T +R L YG+G L Sbjct: 184 KLNAEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQDSQDALTSQFACH 243 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L K +GLP+ +V C + EE+ F KV R +L F+IDGVV+K++SLA+Q++LG Sbjct: 244 AL-LKSYGLPILHQVEKCHTLEEIWEFVEKVRTLRASLPFEIDGVVVKLDSLAEQKRLGS 302 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + PRWAVA+KF A++ T + + QVGRTG +TPVA L+PV +AG ++ ATLHN + Sbjct: 303 TGKNPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLHNEE 362 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R +R GD V+I + GDVIP+VV+V +R D+ PTHCP CG+ V R E Sbjct: 363 EVLRKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPSCGALVARSVDEV 422 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 +C L C Q+ L +F + AMD++ MG+K+++QLV +V P+D++ LT+ +L Sbjct: 423 AVKCPNTLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKRPSDIYALTSEQL 482 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LE KS +N++ ++EK+K+ +F+RF+ ALGI+ VGE TA LA G + L + Sbjct: 483 FQLEGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAKRAGNVHILMQMT 542 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EEL ++ +G VA+ + +FA+ N+ I LL GV P V + PF KT Sbjct: 543 TEELLQIEGIGEKVATAIVEYFADARNQEEIQLLLQRGV-LPQE-VKSISHKGHPFDAKT 600 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VLTG+L Q +R A + E G KV SVS KTD ++AGE GSKL KA+ L + ++ E Sbjct: 601 FVLTGTLKQYTRPAAATLIKERGGKVTNSVSSKTDYLLAGEDPGSKLDKAKSLQVRILTE 660 Query: 663 AEMLRLL 669 E +L Sbjct: 661 EEFQAML 667 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust. Identities = 305/670 (45%), Positives = 395/670 (58%), Gaps = 24/670 (3%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ EL +RHH+ LY+ ++PEI D EYD L REL +LE P+L PDSPT RV + Sbjct: 8 SRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSPTLRVSGS 67 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P AF ++ H PMLSLDN E F +R+ D L + V CE KLDGLAVS+LY Sbjct: 68 PSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPVV--CEPKLDGLAVSLLY 125 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 GVL+ TRGDG+ GED+TSNV TIR +P ++ + LEVRGEV++ + F +N Sbjct: 126 RGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRI---DYMGELEVRGEVYMSRRDFAALN 182 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV------GVLEGGELPDTH 239 + G FANPRNAAAGSLRQLDPR+TA+R L+ F Y V G+ EL Sbjct: 183 QRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGLKTQEEL---- 238 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 LL K PV + LC EEVL + + R + D DGVVIK++SL +E Sbjct: 239 ---LLWLKGRSFPVQEDFRLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREV 295 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG R+PRWAVAFKFP +E+ T V +E VGRTG +TP A LEPV ++G V A+LH Sbjct: 296 LGSTNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLH 355 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DE+ R +R+GD V +R+AG++IP+V+ V L RPE T V P CP CGS + R+ Sbjct: 356 NFDELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLP 415 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GE RC C AQ KE + HF SR MDV G+G+K+ QLV++ V ADLF LT Sbjct: 416 GEVAIRCINP-SCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTM 474 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L+RMG +SA N+V AL+ A++ + +YALGI VGE TA LA FG LEAL Sbjct: 475 EDWLSLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALM 534 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS EEL V VG VVA V +FF +S ++ L GV + P Sbjct: 535 DASEEELASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVR-----MEERPTAGGPLE 589 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G V TG L M R +A+ ++ LG KV+ SVSK ++AGE GSKL++A+ LG+ + Sbjct: 590 GMRFVFTGELGSMRRKEAQDLVIRLGGKVSDSVSKGVTALVAGEGGGSKLSRARALGVPI 649 Query: 660 IDEAEMLRLL 669 E L L+ Sbjct: 650 WSEDRFLELV 659 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 297/670 (44%), Positives = 409/670 (61%), Gaps = 14/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +Q++ ELR +R+H Y Y+V+D PEI DAEYDRL++ELR LE HPELI PDSPTQ Sbjct: 1 MQTPKQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQ 60 Query: 61 RVGAAPL-AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG+A L F+ + H M SL N F ++ F + L E + E K+DGL Sbjct: 61 TVGSAILETPFTPVPHPTRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDGL 120 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +V+++YE GV TRGDG TGED+T N+ I IP +L P LEVRGE++LP Sbjct: 121 SVNLIYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQ---PLDLEVRGEIYLPIQ 177 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G F NPRNAAAGSLRQ DPRI+A R L YGVG E + T Sbjct: 178 TFLELNTQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPESLGV-GTQ 236 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + + G V + E + Y + R +L F+ DGV +K+N+L+ + Sbjct: 237 QELLEKLGQLGFSVDPHYQVVRGVEGIEQGYQAMLAARKSLPFEADGVTVKLNNLSLWSE 296 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG+ A+ PR+A+A+KFPA+E+ T V V FQVGRTG +TPVA LEPV + G VS TLH Sbjct: 297 LGYTAKTPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLH 356 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N ++ LGLRIGD V++ ++G VIP+V+ VV +E P V +PTHCP CG+ +E + Sbjct: 357 NESYVQELGLRIGDTVLVHKSGGVIPEVLRVV-TEAPRGHAPVEWPTHCPECGTALE-LS 414 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 G+ + C L C A+ E+++HF SRRAMD+ G+G+K+I+QL+E V ADL+ L Sbjct: 415 GK-IHLCPNPL-CPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAADLYNLKK 472 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LER KSAQN++ +E +K R L+ALGI +VGE+TA LA FG L+++ Sbjct: 473 EDIAALERKAEKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDSIL 532 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A++EEL VPD+ A +H A ++ I L A G+ + A ++ Sbjct: 533 KATVEELDAVPDIAETTAQAIHQALARPEMQSFIERLRAAGLVFEA----REKQQSQALE 588 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T VLTG LS+ R++ +L GAK++GSVS+KT VIAG AGSKL+KA+ELGI + Sbjct: 589 GLTFVLTGELSR-PREEVARQLEAHGAKISGSVSRKTSYVIAGPGAGSKLSKAKELGIPI 647 Query: 660 IDEAEMLRLL 669 +DEA + LL Sbjct: 648 LDEAGLRALL 657 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 298/699 (42%), Positives = 414/699 (59%), Gaps = 47/699 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +IE ++ EL L Y Y+ +D P + D+EYD L EL +LE ++P+L+ DSPT R Sbjct: 2 NIESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRT 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G L F + RH + SL +VF E + +RV+ + N E + CELK+DGL++S Sbjct: 62 GGVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPE---YICELKIDGLSLS 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG+LV+AATRGDGTTGE+IT NV+ I+ +PLKL E I + VRGE +LP+ F Sbjct: 119 LYYENGLLVTAATRGDGTTGENITENVKRIKDVPLKLK-EAID--IVVRGEAYLPRQNFA 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N + G FANPRNAAAG+LRQLD +I AKR L F Y DT Sbjct: 176 KLNAERELEGAAPFANPRNAAAGTLRQLDTKIVAKRGLATFLYQEA---SPATNDTQEEV 232 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L F++ G V+ + +E+ F + R L +DIDGVVIKVN+LA+QE+LGF Sbjct: 233 LEYFEELGFQVNPERKFARNLDEIWEFIEEATRLRDELPYDIDGVVIKVNNLAEQEELGF 292 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +APRWA+A+KFPA++ T + V++ VGRTG +TP A + V +A V+ ATLHN D Sbjct: 293 TVKAPRWAIAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVD 352 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP-------------------------- 396 I+ +R DKV+I +AGD+IP+V V+L +R Sbjct: 353 YIQEKDIRNHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEK 412 Query: 397 -------EDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAM 449 ED R V PT CP C SD+ E E RC L C AQ +E L HF SR AM Sbjct: 413 GLVFSKREDNR-VKIPTQCPECDSDLIHFEDEVALRCVNPL-CPAQIREKLIHFASRDAM 470 Query: 450 DVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFA 509 ++ G+G +I QL +K+ V ADL++LT L L+++ AQ +V+A+ +++E + Sbjct: 471 NIVGLGPSVISQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAE 530 Query: 510 RFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESN 569 + L+ LGIR VG A L F L AL AS EE+ ++P +G V+A+ V ++F Sbjct: 531 KLLFGLGIRHVGGKAAKLLLERFANLRALSQASEEEISEIPSLGGVIATAVVSYFETAGA 590 Query: 570 RNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVA 629 + ++ EL G+++ +N E I +GKTVVLTG L+ + R +AK +L LGA V+ Sbjct: 591 KTLLDELENAGLNFAYLGAVNVEGI---LSGKTVVLTGKLTTLKRTEAKEKLEALGANVS 647 Query: 630 GSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 GSVSKKTDLV+AGE AGSKL KAQ+LGIE+ E ++L L Sbjct: 648 GSVSKKTDLVVAGEEAGSKLTKAQDLGIEIWSEQDLLDL 686 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust. Identities = 304/771 (39%), Positives = 417/771 (54%), Gaps = 112/771 (14%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 +EQ LR L+ Y Y+V+D P + DA YD L+REL+ELE+++P+LI DSPTQRVG Sbjct: 8 VEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRVG 67 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR-LKNNEKVT------------- 109 P F ++H +P+ SL+N F+ + ++ +R Q + L N+++T Sbjct: 68 EKPATKFVSVKHNIPLYSLENAFNIQELKSWQERWQRQTLLENQRLTLPLRGEVKIKNSI 127 Query: 110 ------------------------------WCCELKLDGLAVSILYENGVLVSAATRGDG 139 + CELK+DG A+++ YENG+LV ATRGDG Sbjct: 128 DESDNFSTVNSLAPVITGSNFDEIDLASVDYICELKIDGSALALTYENGLLVRGATRGDG 187 Query: 140 TTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANP 199 GEDIT NV+TI +IPLKL +N P +EVRGE FL FE IN + + G +FANP Sbjct: 188 IMGEDITQNVKTINSIPLKLKVDNPPLLVEVRGEAFLSINVFENINAEREKIGEIIFANP 247 Query: 200 RNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF----------KKW 249 RNAAAG+LRQLD +I AKR L FF Y + LE E LQF KK Sbjct: 248 RNAAAGTLRQLDSKIVAKRRLDFFAYTL-YLEENE------SNFLQFYTQSQCLELLKKL 300 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G V+ +C S EV A+Y ++ R L + DGVV+K+NSL+ QE+LGF + PRW Sbjct: 301 GFKVNPNGQVCSSLNEVEAYYQYWDKQRENLPYLTDGVVVKLNSLSLQEKLGFTQKYPRW 360 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A K+PA+E T V+ V QVGRTGAITPVA L+PV +AG V A+LHN+D + L L Sbjct: 361 AIALKYPAEEIPTIVQGVTVQVGRTGAITPVAELKPVQLAGTTVQRASLHNSDRLAELDL 420 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 IGD V++R+AG++IP+VV V+ RP+ + PTHCP C + + EAV RC Sbjct: 421 HIGDTVIVRKAGEIIPEVVRVLPELRPKKAQRFQMPTHCPECSQPLIKPRNEAVTRCINT 480 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 C A + SL H+ SR A+D++G+G+K++ QLV V + ADL+ LT LT LERMG Sbjct: 481 -SCPAILRGSLAHWASRAALDINGLGEKLVQQLVNSGLVKSVADLYNLTMEDLTSLERMG 539 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 KSA ++ A+ +K + R LY LGIR VG A L F T+ L A +++ V Sbjct: 540 KKSANKLIEAMGTSKAQPWRRVLYGLGIRHVGTVNAELLTQKFPTVAQLSQAKATDIETV 599 Query: 550 PDVGIVVASHV------------------------------------------------H 561 +G +A +V Sbjct: 600 HGIGPEIAQYVEQWFRVPANQNLVERLKIAGVTMETKDSTSGMAKLTETVLAIQNLAARQ 659 Query: 562 NFFAEESNRNVISELLAEGVHWPAP-IVINAEEIDSPFA-GKTVVLTGSLSQMSRDDAKA 619 N A ++ N++ L GV + E+ S GKT VLTG+L M RD+AK Sbjct: 660 NLVARQNLENLVERLKIAGVTMETKDSTSDVVEVQSGLLRGKTFVLTGTLPTMRRDEAKN 719 Query: 620 RLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + G KV SVS KTD ++ GE GSKL KA++LG++ + E+E+L L Sbjct: 720 LIQNAGGKVTSSVSSKTDFIVVGEDGGSKLEKAKKLGVKELSESELLEALA 770 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 276/673 (41%), Positives = 413/673 (61%), Gaps = 19/673 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 ++ ++ LR + HH LY+ + PEI D EYD L++EL+ELE ++ E +SPTQ+VG Sbjct: 6 LKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESPTQKVG 65 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + I H+V M SL+N + E LAF R + L + +C ELK+DG ++++ Sbjct: 66 SDLTPGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYASE--YCAELKIDGFSINL 123 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG + A TRGDG GED+T N R + +P + + +E+RGE+++P F Sbjct: 124 YYENGNFIYATTRGDGLEGEDVTENFRLLPDVPFTI---DYKGAIEIRGEIYIPVQDFLA 180 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-----GGELPDT 238 +NE R K FANPRNAAAGS++ R L Y +G E E+ D Sbjct: 181 LNEFRRENELKTFANPRNAAAGSIKLKSREEVKSRHLKALFYALGYYETPLQYKNEIIDK 240 Query: 239 HLGRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 RLL F + G P S R TLC+ +E F ++E++R T+ +DIDG+VIKVNSL Q Sbjct: 241 QT-RLLDFLDELGFPTSKR-TLCKHYQEAEKFCLQMEQERYTIPYDIDGIVIKVNSLEDQ 298 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 ++LG+ A++P+WA+A+KF +E+ T + V FQVGRTGA+TPVA L+PV ++G VS+AT Sbjct: 299 KKLGWTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHAT 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNADEI+RL L GD V++ ++G++IP++++V +S+RP + + V+FP CPVC + ++R Sbjct: 359 LHNADEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQR 418 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 E ++ C C AQ + L+HF SR AMD+ G+G +I +L+E + D++ L Sbjct: 419 DEDGSINYCPNA-NCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYHL 477 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K+ +ERMG KSA N+ A+E +K F R L+ALGIR +G TA LA +F ++A Sbjct: 478 DYNKIAEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTLAQHFKNIDA 537 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L A EEL VPD+G ++A + FF+++SNR +I L G+ + + + + Sbjct: 538 LIMAKEEELLSVPDIGSIIARSIIGFFSQKSNRELIDSLRKVGLQF----TYISPQSSAI 593 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG- 656 AGKT ++TG+L SR D + + E G K+ VSK+ + +I GE GSKL KA +LG Sbjct: 594 LAGKTFLITGTLPNYSRKDMETLITEHGGKILSGVSKQLNYLIVGENPGSKLDKAHQLGT 653 Query: 657 IEVIDEAEMLRLL 669 +++I EAE+L +L Sbjct: 654 VKIISEAELLDML 666 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust. Identities = 293/662 (44%), Positives = 396/662 (59%), Gaps = 12/662 (1%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR + H Y+ DAPEI D EYD L R LR++E +HPE + DSP Q +G AP AAF Sbjct: 16 LRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDSPVQTIGGAPSAAF 75 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK---NNEKVTWCCELKLDGLAVSILYEN 127 + H PM SLDNVFD + + +++ L ++ T+ E+K+DGL+V++ Y + Sbjct: 76 EPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTGEIKIDGLSVNLYYLD 135 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G L AATRG+G GE +T+ V TI IP L G + +LEVRGEV+L +A F N Sbjct: 136 GTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDG--LKGQLEVRGEVYLSRADFAAFNAQ 193 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFK 247 A G + NPRN AAG+LRQ DP +T R L Y +G +G E T L Sbjct: 194 AEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFYSLGRRDGVEA-RTQSEVLQWLA 252 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAP 307 G PVS ++ ++ E R FD DG VIK++ LA QE+ GF +RAP Sbjct: 253 GRGFPVSHYSETFRGYVAAADYHRRMTEARSNFEFDADGTVIKLDPLALQEEAGFTSRAP 312 Query: 308 RWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERL 367 RWA+AFKFP ++ T + + VGRTG + P+A L P + G VS ATLHN D I ++ Sbjct: 313 RWAIAFKFPVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGSTVSKATLHNEDYIRQM 372 Query: 368 GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCT 427 LR+GD VV+R++G VIPQ++ VV +RPE T VFPT+CP CG +V R EG+A C Sbjct: 373 DLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECGHEVTRAEGDANTYCP 432 Query: 428 GGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLER 487 C AQR E +++FVSR AMDV G+G+K++ Q++E V ADL+ LTA +L GLER Sbjct: 433 NP-ACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAADLYLLTAEQLAGLER 491 Query: 488 MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQ 547 G K AQNV+ LE +K R + ALG+ VGE A LA FG+L+AL A+ E+++ Sbjct: 492 GGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAFGSLDALLRATPEQIE 551 Query: 548 KVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 VP +G V A V A+ + RN+I L A G+ + E++ AG V+TG Sbjct: 552 AVPGMGKVTAVSVSAALADPTMRNLIERLRAAGMSPEETQTVRGEQL----AGLNFVITG 607 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 SLSQ RD+ KA L GA+V GSV++KT +IAG+ AGSKL +A+EL + V+DEA + Sbjct: 608 SLSQ-PRDELKALLEAAGARVTGSVTRKTSYLIAGQDAGSKLDRARELAVPVLDEAALGT 666 Query: 668 LL 669 LL Sbjct: 667 LL 668 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust. Identities = 292/685 (42%), Positives = 412/685 (60%), Gaps = 27/685 (3%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 L +LR +R H+ LY+V+ EI D EYDRLM L E+E PEL T DSP+Q+VG P+ Sbjct: 26 LDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSPSQKVGGEPI 85 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN---NEKVTWCCELKLDGLAVSIL 124 F Q+ H VPMLS+DNV+DE L F ++V R + W E K+DG+A+S++ Sbjct: 86 EGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFKVDGVALSLI 145 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG----------ENIPARLEVRGEV 174 YE G L+ A TRGDG G+D+T N +TI+ +PL L NIP LEVRGE Sbjct: 146 YEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIPRLLEVRGEA 205 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 ++ F K+ G + F N RNA AGSL+ LDP++ A+R L FF + +G ++ E Sbjct: 206 YIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAHSLGAIDEQE 265 Query: 235 LP--DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 TH L F + GLP S E +A + E TL F++DG+V KVN Sbjct: 266 ATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFEVDGLVFKVN 325 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 +LA + +LG +++PRW VA+K+ E T V ++ QVG+TG +TPVA LEPV +AG Sbjct: 326 NLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVLTPVADLEPVEIAGTT 385 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS ++LHN DEIERLGL +GD V++ +AG +IP +V V RP +T FP CP C Sbjct: 386 VSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHIVRVEEHLRPTNTAPYRFPETCPECS 445 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 + VE+ EG RC + C A+ +ESL++F SR+AMD++G+G K+++QLV V + + Sbjct: 446 TIVEQDEGGVYIRCP-NINCPARFRESLRYFASRQAMDIEGLGTKLVEQLVSSRLVQSIS 504 Query: 473 DLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA 530 DL++L + L LER+G KS +++ LE +++ R L AL IR VG+ TA LA Sbjct: 505 DLYRLVDKRAELLELERLGEKSVDSLLAGLEASRQQPLWRLLTALNIRHVGQRTAQILAE 564 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 FG+++ L A +IEEL P+VG V+A VH+FF E +I EL G++ + Sbjct: 565 RFGSMDRLSAQTIEELSATPEVGEVIAQSVHHFFHTEYGSKLIEELKNLGLN----LGTE 620 Query: 591 AEE-----IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 +E+ + +GKT V+TG+L M R++ + + G A SVSKKT V+AGE A Sbjct: 621 SEQKQIAATEGVLSGKTFVVTGTLPSMGREEIEELIRLHGGHAASSVSKKTSFVVAGENA 680 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLG 670 GSKL KAQ LG+ VI+EAE ++L+G Sbjct: 681 GSKLTKAQSLGVPVINEAEFMKLIG 705 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 281/664 (42%), Positives = 402/664 (60%), Gaps = 19/664 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I+ ++ ELR + YLYH D P I D YD LMREL ELETK+PE SPT+++G Sbjct: 3 IQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKIG 62 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L AF + H VPM+SL N+F++E F R+Q + N ++ ELK+DGLAV++ Sbjct: 63 GVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPN---TSFTTELKIDGLAVTL 119 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +YE G+ AATRG+G GEDIT NV+TI+ +PL+L P +EVRGE+++ F++ Sbjct: 120 IYEKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSK---PLDIEVRGEIYMSHKTFKE 176 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +N + + +F NPRNAAAG++RQLD ++ AKR L F Y V + T L Sbjct: 177 VNLERANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTV--VGASNFNSTQKETL 234 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + G PV+ L ++ + + + R TL +D DGVVIKVN E +G+ Sbjct: 235 EFLSELGFPVNPHYKLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGYT 294 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 A+ P++A A+KF A++Q+T V D+ FQVGRTG ITPVA L PV ++G LVS ATLHN D Sbjct: 295 AKYPKYAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNEDY 354 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT--HCPVCGSDVERVEGE 421 I +RI D+V++ +AG++IP+V+ VVL R T + F HCP C S++ R +GE Sbjct: 355 ILNKDIRIDDQVLVHKAGEIIPEVIEVVLGSR---TNQAPFEMVKHCPACESNLVRKQGE 411 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A C C + L HF SR AMD+D +G+K+++ L ++ Y+ T D++KL K Sbjct: 412 ADYYCAND-NCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFK 470 Query: 482 --LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L L G K + ++NA+E +K T R ++ LGI+ VG A L ++ ++ L Sbjct: 471 DQLEELPGFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLA 530 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E+L ++PD+G +A V +F+ ESN++++ EL G+ I + PF Sbjct: 531 DAKYEDLIQIPDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMTYKIDVVTTH---PFN 587 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT V+TG+L SR +A + +LG KV+GSVSKKTD V+AG+ AGSKL KA ELGIEV Sbjct: 588 GKTFVVTGTLDDFSRTEASDIIEKLGGKVSGSVSKKTDYVLAGKEAGSKLTKALELGIEV 647 Query: 660 IDEA 663 +DEA Sbjct: 648 MDEA 651 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/695 (39%), Positives = 412/695 (59%), Gaps = 34/695 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E+Q+ +L L + + Y+ E+ D +D+L+ +L LE ++PE PDSPT RVG Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYPEFRQPDSPTARVGG 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + H PMLSL N + EE + F+KRVQ L N + + CELK DG+A+S+ Sbjct: 64 TISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGL-NGQTYEYICELKFDGVALSLT 122 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL-------HGE--------NIPARLE 169 YENGVLV ATRGDG G+DIT+N+RTIR +PL++ H + +PA E Sbjct: 123 YENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAALPALFE 182 Query: 170 VRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV 229 VRGE FLP A F++IN++ G + ANPRNAA+G+ +Q D AKR L CY Sbjct: 183 VRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLD--CYLYSF 240 Query: 230 LEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 L ++ TH L+ WG VS C +EV+A+ ++ E R L DG+VI Sbjct: 241 LSDTDIFQTHEESLVAMNAWGFNVSPTWRKCTDIQEVMAYINEWETKRFDLPLGTDGIVI 300 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN QQ LG+ A++PRWA+AFK+ A T + +++QVGRTGA+TPVA L PV +A Sbjct: 301 KVNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTPVLLA 360 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G +V A+LHNA+EIERLG+ + D V + + G++IP++ V L+ R + ++ +V+PT CP Sbjct: 361 GTIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQPIVYPTTCP 420 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CG+ + R EGEA C C QR+ +HF+ RRAM+++ +G+ I+ L+++ V Sbjct: 421 ACGTALVRKEGEAHFYCPNEQGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDRGLVQ 480 Query: 470 TPADLFKLTAGKLTGLERM--------------GPKSAQNVVNALEKAKETTFARFLYAL 515 TPADL+ L A L G+E++ K+ +N++ A+E++K FA L+ L Sbjct: 481 TPADLYDLKATDLLGIEKVFLVEETGKKRVVSFREKTVENILTAIERSKSQPFANVLFGL 540 Query: 516 GIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 GIR VG TA L YFG+++A+ A+ E+L VPD G +A V +F + +N+ + Sbjct: 541 GIRYVGNTTAEKLVDYFGSMDAIMNATQEQLLAVPDTGPRIAESVVAWFGDTANQEFVER 600 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L A G+ + + +E DS GKT + TG+ + SR++ ++R+ G K+ +SKK Sbjct: 601 LRAAGLQFVGEKKVVEQEGDS-LTGKTFLYTGTFANFSREELESRIEANGGKLLSGISKK 659 Query: 636 TDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 + +I GE AG SK+ KA++L + +I E E + +L Sbjct: 660 LNYLIVGENAGPSKVEKAKKLNVPMIGEDEFMAML 694 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 268/658 (40%), Positives = 402/658 (61%), Gaps = 16/658 (2%) Query: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHE 76 HH LY++ P I D E+D L+++L E+E HPE IT SP+QRV + + F + H Sbjct: 16 HHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNESLTSGFKTVAHR 75 Query: 77 VPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATR 136 PMLSL N + +E F KR+Q +L +V + ELK+DG+A++ +YE G+ TR Sbjct: 76 TPMLSLANTYSKEEIEDFIKRLQ-KLVGKRQVEFSVELKMDGIAITAIYEQGIFKRGITR 134 Query: 137 GDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVF 196 G+G G+DIT+N+R I +PL+L GEN+P LE+RGEVF+P+ F ++NE + G ++ Sbjct: 135 GNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQLNEQKLQDGEVLW 194 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG------VLEGGELPDTHLGRLLQFKKWG 250 ANPRNAAAGSL+ LDP++ A+R L YG+ + + E+P F+ G Sbjct: 195 ANPRNAAAGSLKLLDPKMVAERRLAVVFYGLAEDSSASIKKQAEVPSF-------FRSIG 247 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 LP + C++ E++ F ++ R L +DIDG+VIK+N Q++LG ++PRWA Sbjct: 248 LPALEHHAYCQNIEQIWKFAEEIRSLRTILPYDIDGIVIKLNDFKDQKRLGVTGKSPRWA 307 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+KF A++ T + D+ Q+GRTG +TPVA LEP+ ++G ++ A+L+N +E++R +R Sbjct: 308 IAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEPIFLSGSTIARASLYNQEEVQRKDIR 367 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 IGD V I + GDVIP+V+NV LS+RP ++ P +CP CG+ V + GE RC Sbjct: 368 IGDLVTIEKGGDVIPKVLNVELSQRPLHSQPWQMPLYCPSCGTQVINIIGEVAVRCPNED 427 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C Q+ L +FV ++AMD+ MG+KI+ QL +K ++H P+D+F LT G+++ L Sbjct: 428 SCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQKGFIHLPSDIFALTEGQISQLTNFKT 487 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 K+ QN++ ++E++K + RF+ AL I+ +G TA LAA GT+E L + E+L K+ Sbjct: 488 KAIQNLMRSIEESKHVSLERFIMALEIKYIGIGTAELLAARAGTIETLMQLNEEDLIKIE 547 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 VG VA V F +R + LL GV P + + F GK VLTGSL Sbjct: 548 GVGGKVAQAVVEHFQNPKHRQEVYRLLELGV-CPQSKTVQI-FTNHAFQGKIFVLTGSLE 605 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 +R A + + E G KV+ SVS+KT+ V+AG GSKL KA+ LGI V++E E + L Sbjct: 606 HYTRQSAASLIKERGGKVSDSVSRKTNYVVAGAEPGSKLDKARTLGIPVLNEKEFISL 663 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/691 (41%), Positives = 406/691 (58%), Gaps = 30/691 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +SI ++ +L + H LY+ APEI D +YD+L+ EL +LE HP+L PDSPTQ Sbjct: 10 DSIASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQL 69 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG + Q+ H VPMLS+DN + E A +R++ L+ E V W E K+DG+A Sbjct: 70 VGGDVVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEG-ESVAWTMEYKIDGVAG 128 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH----------GENIPARLEVR 171 SI YENG L A TRG+G G+DIT NVRTIR +P + G N+P LEVR Sbjct: 129 SIRYENGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEVR 188 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GE+++ A +N G + F N RN AG++R LDP+I A R + FFC+G G L Sbjct: 189 GELYMTDADLADLNVRQTDAGHEPFKNTRNVTAGTIRLLDPKIAASRNIRFFCHGSGELV 248 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G D H+ L + G+P++ V E+ E+ L K+E + P L F+IDG+V KV Sbjct: 249 GVRASD-HMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFKV 307 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 +S Q+E+LG +++PRW +A+KF E +T + ++ QVG+TG ITPVA L PV +A Sbjct: 308 DSFEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIADT 367 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VS A+LHNADEIERL +R+GD VV+ +AG +IP+VV V R + + FPTHCP C Sbjct: 368 TVSRASLHNADEIERLDVRVGDTVVVEKAGKIIPKVVRVEKHARTKPLPKFEFPTHCPQC 427 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + R EG RCT C AQ ++ L +F SR MD+DG+G++++D L++KE V Sbjct: 428 DEVLTRDEGGVYIRCTNP-ACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVENY 486 Query: 472 ADLFKLTAGKLTGLE---------------RMGPKSAQNVVNALEKAKETTFARFLYALG 516 ADL++L +L L + G K+A+++V + +++ AR L ++ Sbjct: 487 ADLYRLNVDELAELTWPRLRKGKGDEMIEVQFGRKNAESLVAGINESRTRGLARVLSSIS 546 Query: 517 IREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 IR +G A + A F L+ L +A E+L + ++G +A + F ES +S+L Sbjct: 547 IRHIGPRVAKLITAKFWNLDLLRSAKAEDLAAIHEIGDRIAESLVKFIHSESGSQTLSDL 606 Query: 577 LAEGVHWP--APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 A GV P+ EE + P AGK +V TG+L +RD+ KAR+ ELG + A SVSK Sbjct: 607 DAVGVTMSETEPVATPDEEANLPLAGKNIVATGTLQHYTRDEIKARIEELGGRAASSVSK 666 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 KTD +IAGE AGSKL KA+ LG+EV+ E + Sbjct: 667 KTDFLIAGEKAGSKLTKAESLGVEVLSEDDF 697 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 282/666 (42%), Positives = 408/666 (61%), Gaps = 13/666 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ LR + +H Y Y+V++ P I D EYDRLMR L ELE +PEL+TPDSPTQRVG Sbjct: 17 EEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQRVGGK 76 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 L F ++H VPMLSLDN ++EE + F+KRV+ L+ +E V + ELK+DG+++++ Y Sbjct: 77 VLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESE-VEYVAELKIDGVSIALRY 135 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG V ATRGDG GED++ NV+TIR++PL+L P +EVRGE+++P F+++N Sbjct: 136 ENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLRK---PLTIEVRGEIYMPVDEFKRLN 192 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E+ G FANPRNAAAG+LRQL+ + A R L F Y V E L T L Sbjct: 193 EEREEEGLPPFANPRNAAAGTLRQLNTALVASRRLDSFIYYVVHPENYGL-KTQWEALQF 251 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K+ G V+ LC++ +EV+ ++ + +E + L + +DGVV+KVN Q+ LG ++ Sbjct: 252 LKEIGFKVNPHSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQKVLGETSK 311 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+AFKFPA++ T + DV QVGRTG +TPVA LEPV +AG +V A+LHN + I Sbjct: 312 APRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHNFEYIR 371 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA- 424 +RIGD V + +AG +IPQ+V + R +E+ P CPVCG V ++ + VA Sbjct: 372 EKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSPDEVAI 431 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC C A+ K +L+ FVSR A+D++G+G+KIID+LV+ V AD+F LT L Sbjct: 432 RCLNPH-CPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPFDLAQ 490 Query: 485 L-ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 L +G ++ ++ +E+AK+ + + LGI VG+ TA LA +F +LEA+ AS Sbjct: 491 LGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIAEASY 550 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 E L+ +P +G +A + +F R +I +L GV V + D G T Sbjct: 551 ETLKDIPGIGPEIARSIVEYFRNPKTREIIEKLKKAGVKLEEKTV----KYDV-LKGLTF 605 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 +TG+L +R++ L LGA+V SVSK TD +I GE GSK KA+ L ++ + E Sbjct: 606 AVTGTLKNFTREEIIEFLERLGARVVNSVSKNTDYLIVGENPGSKYEKAKALKVKTMSEE 665 Query: 664 EMLRLL 669 E LR + Sbjct: 666 EFLRFV 671 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/655 (42%), Positives = 391/655 (59%), Gaps = 6/655 (0%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 L H LY+V+DAPEI D EYD LMRE+ + E +HP+LI DSP++RVG A L AF ++ Sbjct: 19 LNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKRVGGAVLDAFEKVT 78 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H PMLSL++VF + + +R + + + WCCELK+DGLAVS+++E+G V A+ Sbjct: 79 HAKPMLSLEDVFSKNELHDWLQRAAEGV-GQPWIPWCCELKIDGLAVSLIFEDGKFVQAS 137 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGK 194 TRGDG GED+T N++T++ +PL+L G ++P LE+RGEV++ + GF ++N G Sbjct: 138 TRGDGVVGEDVTENLKTVKDLPLRLLG-DVPGHLELRGEVYMGKDGFAQLNAAREEAGLP 196 Query: 195 VFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVS 254 +FANPRNAAAGSLRQLD + AKR L F Y V E L + L K GLPV Sbjct: 197 LFANPRNAAAGSLRQLDTSVAAKRNLRLFTYYVQDAESYGL-HSQSEILEWLKARGLPVQ 255 Query: 255 DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFK 314 E+ E L F + +R +L + DG V K ++ LG + PRWAVA+K Sbjct: 256 KAWRRAETETEALDFLERWSGERFSLPYATDGAVFKADATEYWTVLGNNVKTPRWAVAYK 315 Query: 315 FPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDK 374 +P +E+ T + +E +GRTG +TPVA LEPV ++G +V A+LHN +EI+R +R+GD+ Sbjct: 316 YPPEERKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEEIQRKDIRVGDR 375 Query: 375 VVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGA 434 V +R+AG++IP++V V ++ R P CPVCG+ V ++ GE RC C A Sbjct: 376 VWVRKAGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVALRCL-NRSCPA 434 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQ 494 Q + L HF SR+ M++ G+GD++ +QLV V +DL+ L L L+RMG KSA Sbjct: 435 QLTQGLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVRLDRMGEKSAG 494 Query: 495 NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 ++ A+ K+KE + ALGIREVG AA LA F +L+ + AA E L V VG Sbjct: 495 KLLQAIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSLDEIAAADEERLAAVEGVGP 554 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSR 614 V+A + FF EE NR +I L GV + E P AGKT V TG LS+MSR Sbjct: 555 VIAGSIKTFFGEEHNRRLIDGLREAGVSMRSETA--PEAPIGPLAGKTFVFTGELSRMSR 612 Query: 615 DDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 A+ + + G K SVSKKT V+ GEA G K KA L + ++E E ++ Sbjct: 613 AQAQELVTQRGGKSVNSVSKKTSYVVVGEAPGGKAEKALRLNVPTLNEEEFFAMI 667 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/672 (40%), Positives = 410/672 (61%), Gaps = 9/672 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I++ + +LR L+ Y YHV++ + D+ YD+L R+L LE ++P LI+ DS TQRV Sbjct: 5 NIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSVTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN--NEKVTWCCELKLDGLA 120 G P F+ ++H++P+ SL+N F+ + A+ R Q LK+ N+ + + ELK+DG A Sbjct: 65 GEKPALHFNSVKHDIPLYSLENAFNLQELEAWENRNQKYLKSQENQLIKYIAELKIDGSA 124 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L TRGDG GEDIT N+RTI +IPL L+ ++ P+ + V GE FLP Sbjct: 125 LSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAFLPLDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++IN+ ++ G +FANPRNAAAG+LRQLD +I ++R L FF Y L L Sbjct: 185 FKRINKQKQKEGKSLFANPRNAAAGTLRQLDSKIVSERKLQFFAYS---LYADNLDIKSQ 241 Query: 241 GRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L+F ++ G V+ LC+S + V ++++ + + L + DGVVIK+NS Q++ Sbjct: 242 WDTLKFLQECGFLVNPYYRLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHILQKE 301 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 L + R PRWA+A K+PA+E T V D+ F GRTGA+TP+A + PV + G +V ATLH Sbjct: 302 LAYTQRFPRWAIALKYPAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVRKATLH 361 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N D I +LG+ IGD V IR+AG++IP+V+ V+ + R T+ CP C S + Sbjct: 362 NIDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCPKCNSMLVSFS 421 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 EAV RC C A K +L H+ SR A+D+ G+G+KIID L+ V++ +DL+ L Sbjct: 422 NEAVVRCINN-SCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVNSISDLYHLNF 480 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +++ LERMG KSA+N++ ++E +K ++ + LY LGI VG TA L F +++ L Sbjct: 481 QEVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLTENFSSVQQLL 540 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG-VHWPAPIVINAEEIDSP- 597 A + L + +G VA + ++F+ E N+ +ISEL G V + IN + D Sbjct: 541 QAPYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISELDKNGFVLENKNLGINQNKPDKQI 600 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F T V+TGSL+ + R + K + G KV SV+KKT+ ++ GE GSKLA+ +L I Sbjct: 601 FFNITFVITGSLNTLKRSEIKNLIENFGGKVVNSVTKKTNYILVGENPGSKLAEGMKLNI 660 Query: 658 EVIDEAEMLRLL 669 ++E + LR+L Sbjct: 661 IRLNETDFLRIL 672 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 295/674 (43%), Positives = 411/674 (60%), Gaps = 22/674 (3%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q+ LR L +H + Y+ +D PEI D YD L+ ELR LE HPEL+TPDSPTQRVG A Sbjct: 8 QRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSPTQRVGGA 67 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN----NEKVTWCCELKLDGLAV 121 ++ ++RH MLSL N E+ LA+ +R++ L + + + E K+DGLA+ Sbjct: 68 VVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEPKVDGLAM 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YENG L+ TRGDG GED+T N+RTI IP ++ G PA LEVRGEV++ A F Sbjct: 128 SLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDG--APAWLEVRGEVYMSLADF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E +N G F NPRN+AAG++RQLD R+ A+RPL+ +CYG+G EG TH Sbjct: 186 EALNLRRAEEGRSTFMNPRNSAAGTIRQLDSRLAAERPLSMWCYGIGETEGISF-STHWE 244 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G PV+D + +AE+V+A + +E R +L F+IDGVV+KV+ + Q +LG Sbjct: 245 SLQWLRAHGFPVNDEIRRIRTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVELQRRLG 304 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 V R PRWA+A+KFP +T + DV + VG+ G + P A LEPVHV GV V ATLHN Sbjct: 305 VVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKLATLHNE 364 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVV--LSERPEDTREVVFPTHCPVCGSDVERVE 419 +++ R +R GD V++ RAGDVIPQV++ ++ER + P CPVC D V+ Sbjct: 365 EDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVC--DTPTVK 422 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GE V C +R + L+H+VSR AMDVDG+G+K + L+E + TP D ++L+A Sbjct: 423 GEGVFTKCPNRDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYYRLSA 482 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L+R G SA+N V A+ +KE F R L+ LGI VG T LA F T++AL Sbjct: 483 EQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTIDALT 542 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW----PAPIVINAEEID 595 AAS EE+ P +G +V +H+ +E R VI +L A GV P P + Sbjct: 543 AASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRMEEDGPPP-------GE 595 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 P A K +VLTG+L ++R++A R++ G +V SVS++TD V+AGE AG+KL KA+ L Sbjct: 596 GPLADKAIVLTGTLPTLTREEATERILAAGGRVTSSVSRRTDYVVAGERAGTKLEKAERL 655 Query: 656 GIEVIDEAEMLRLL 669 + V+DE + LL Sbjct: 656 RVPVLDEDGLEALL 669 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 287/665 (43%), Positives = 402/665 (60%), Gaps = 17/665 (2%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ ELR L + Y+V D P I D EYDRLM+EL LE K+PE+ SP+QR+ + Sbjct: 9 RILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSPSQRIIGSV 68 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 L F ++ H+ MLSL NVF++E F +R+ + + N E V C K DGLA+++LY+ Sbjct: 69 LDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVSNPEFVVEC---KYDGLAMALLYD 125 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPA--RLEVRGEVFLPQAGFEKI 184 +G A TRGDG GED+++NV+TI +IP+ +IP +EVRGEV++P+A FE++ Sbjct: 126 DGNFTRAVTRGDGIVGEDVSNNVKTILSIPM-----HIPEMRHVEVRGEVYMPKASFEQL 180 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N+ G FANPRNAAAGS+RQLD I A R L + Y + T L Sbjct: 181 NKRQEEKGLAPFANPRNAAAGSIRQLDSSICASRKLDAYWYYFQNASDFAV-QTQEEALQ 239 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 K + +C + E++ F +++E R L ++IDG+VIK+N+LA Q +LG A Sbjct: 240 AMSKMHFRTNPLRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRRLGSTA 299 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PR+A A+KFPAQE +T ++D+ VGRTG ITP A LEPV VAG VS A LHN D I Sbjct: 300 KVPRYATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHNEDMI 359 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 LRIGD VV+R+AG++IP+VV V R FPT CP+CGS + R+ EA Sbjct: 360 VNKDLRIGDIVVVRKAGEIIPEVVTSVPERRDGTQVPYKFPTTCPICGSHLVRLPDEAAH 419 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C C A+ ES+ HF SR AM++D +GDK I+QL E Y+++ D++ L Sbjct: 420 YCINQ-DCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIYFLDRYYDEL 478 Query: 485 LERMG--PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 +E+ G KS ++ ++EK+K+ LY LGIR+VG+ A LA FG ++ L A Sbjct: 479 IEKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGIRQVGKKAAMILAEQFGDIDTLMHAC 538 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 ++EL + D+G++ AS V FF EE N ++I L G ++ + ++S F KT Sbjct: 539 VDELVLIHDIGLITASSVVAFFKEEKNLHLIDVLKQAGCNFKQE---KKQVVESRFTNKT 595 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VLTG+L +R++AKA L LGA V+GSVSKKTD VI G AAGSKL KAQ LG+ + E Sbjct: 596 CVLTGTLEHYTRNEAKAILESLGANVSGSVSKKTDYVIYGTAAGSKLTKAQSLGVMTMSE 655 Query: 663 AEMLR 667 E ++ Sbjct: 656 EEFVQ 660 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust. Identities = 274/668 (41%), Positives = 404/668 (60%), Gaps = 5/668 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ ELR L HH YLY+V AP I D E+D L++EL ++E +P L+TPDSPTQRVG Sbjct: 11 ERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPTQRVGGQ 70 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ F Q+ H+ PMLS+DN +DE F+ V+ + V + ELK+DG+++S+ Y Sbjct: 71 PIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKIDGVSMSLTY 130 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENGVL AATRG GT G+D+T N++TI AIPLKL N PA EVRGEV++ + +IN Sbjct: 131 ENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMTRGELARIN 190 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + + + + N RN AG+L+ DPR A R L FF YG G + GG T L + Sbjct: 191 AEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDI-GGLAITTQAAMLAK 249 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K++G PV+ +C S +EV+A+ + E R L +D DG+V+KVN AQ+E++G+ A+ Sbjct: 250 LKEFGFPVNPHERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQRERIGYTAK 309 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE-PVHVAGVLVSNATLHNADEI 364 P+WA A+KF A++ T + V F +G+ G +TPVA + PV +AG V++A++HNA + Sbjct: 310 VPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTHASMHNASWV 369 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +RIGD VV+ + G++IPQVV+V+ ++R + + +P CP CG VE+ E Sbjct: 370 AERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPVEKEESATSY 429 Query: 425 R--CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 C +C AQ + L+ F + M++DG+G ++ QLV+ E V + ADL++LT +L Sbjct: 430 NFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVADLYRLTKAQL 489 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LE K AQN+++ + +K AR L L I VGEA + L F ++ + AA+ Sbjct: 490 LALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMSDLLVEEFPDIDLIIAAA 549 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E+L +V G A V FF ES R +I++L G+ A P AGKT Sbjct: 550 PEDLARVKGFGPKRAQFVRAFFDSESGRQLIADLKQFGIKMTHDKKA-APTGGLPLAGKT 608 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV+TG+L R + + + GAK +GSVSKKTD V+ G+ GSK KA+ELG+++I+E Sbjct: 609 VVVTGTLVNYDRIGIEQAIKDAGAKASGSVSKKTDFVLVGDKPGSKADKAKELGVKIINE 668 Query: 663 AEMLRLLG 670 AE +++G Sbjct: 669 AEFRQMIG 676 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 294/699 (42%), Positives = 408/699 (58%), Gaps = 42/699 (6%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAP--EIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +++ ELR + H+ LY+ P EI D EYD L +EL+ELE++ PE + DSPTQ Sbjct: 14 VAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQI 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-KVTWCCELKLDGLA 120 VG + F +++H VPMLS++N L+ + + LK++ + E K+DGL+ Sbjct: 74 VGGSVSEGFKKVQHSVPMLSIENK-PVTKMLSEVRSIIKELKDDAISIDIVAEPKIDGLS 132 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 SI YE LV AATRGDG GEDIT NV +I IP K+ + P +E+RGEV++ + Sbjct: 133 CSIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIP-KILPLDAPEVIEIRGEVYMSNSD 191 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++ + G K NPRNAAAGSLRQLDP +TA RPL FF Y G + + Sbjct: 192 FKQYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISNS-FAKSQW 250 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + WG V D + L S++E+ +++ +++E R L F IDG+V K+NSL+ QE++ Sbjct: 251 DALQTLRGWGFKVCDDIRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLNSLSLQERV 310 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G RAPRWA A KFP +++ T ++++ VGR+GA+TPVA L PV + G VSNATLHN Sbjct: 311 GQTNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTTVSNATLHN 370 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+E RI D +V++RAGDVIPQVV+VV+ +R + VFP+ CPVCGS R Sbjct: 371 QDEVECKDFRIDDTIVVQRAGDVIPQVVSVVIEKRLSGSIPFVFPSACPVCGSKAVREPR 430 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 EAV +CTGGL C AQ E LKHFVSR A ++DG+G+K I+ K + +P D+F+L Sbjct: 431 EAVWKCTGGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASPVDIFRLEEI 490 Query: 480 --------------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 L + G SA N+ A+ ++ T RF+YALGI +VGE TA Sbjct: 491 LSPPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALGIPKVGEVTA 550 Query: 526 AGLAAYFGTLEALEAASI----------EELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 LA + +L+ +++ + + L + +G VVA + +FFAE N V+ Sbjct: 551 KILADNYVSLDNWQSSMLKAAERESECYQHLISIDGIGSVVADEIVSFFAEAHNIQVLDS 610 Query: 576 ----LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGS 631 L E PA I N +GK VV TG L + SR AK + GAKVA Sbjct: 611 LKNYLSVEDFTKPAIISSN-------ISGKIVVFTGELEKRSRKAAKIEAEKFGAKVATD 663 Query: 632 VSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 VS+KTD+VIAG GSKL KAQELGI+++ E E L+ Sbjct: 664 VSRKTDIVIAGTDPGSKLRKAQELGIKILSEDEWEHLIN 702 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 273/669 (40%), Positives = 408/669 (60%), Gaps = 12/669 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +LR L + Y Y+V+D P + DA YD L EL++LE +HPELIT DSPTQRVG Sbjct: 6 LRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVG 65 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL-KNNEKVTWCCELKLDGLAVS 122 P+A F ++ H MLSL++VF E A+ RV+ + +EKV + E+K+DGLA S Sbjct: 66 GVPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMDGLACS 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL-----EVRGEVFLP 177 ++YENG LV A TRGDG GED+TSNVRTI ++PL L R EVRGE+ + Sbjct: 126 LIYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRGEIVMF 185 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FE +N + G K +ANPRN AAG++RQLDPR+ A+R L F Y + + E+P Sbjct: 186 KKDFELLNAQLEQEGKKTYANPRNLAAGTIRQLDPRLVAQRKLYFLAYDLLRDDPAEVPT 245 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + + ++ G + + +S +E++ F E+ R L ++ DG+VIK+N A Sbjct: 246 WEMAYRI-VRELGFRSNRDAKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKLNDRALY 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG V + PR A+A+K+PA++ T ++D+ +GRTGA TPVA LEPV +AG V AT Sbjct: 305 RALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGSTVQMAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE++R G+ IGD VV+++AGD+IP+V++ + R + P +CP C +D+ R Sbjct: 365 LHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPECETDLVR 424 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 EGEAV RC IC A+ S++HF S+ A+D+DGMG+K + L++ + ADL+ L Sbjct: 425 PEGEAVWRCPNP-ICPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAADLYVL 483 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 ++ LER SA +++A+ K A+FL+ALGIR VG TA + A+FG+L A Sbjct: 484 KKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHFGSLTA 543 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A+I++L +V VG VVA + +F + ++ ++ + GV P + P Sbjct: 544 IRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQALLDKFEKYGVQ---PQDVKQAPTKGP 600 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE-AAGSKLAKAQELG 656 AG V+TGSL + R++A ++ LG +V K TD ++AG+ GSKLAKA++ G Sbjct: 601 LAGIHFVITGSLHSLDREEAADKIRALGGIFQTAVGKNTDYLVAGDNVGGSKLAKAEKFG 660 Query: 657 IEVIDEAEM 665 ++IDE ++ Sbjct: 661 TKIIDEQKL 669 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 302/682 (44%), Positives = 410/682 (60%), Gaps = 38/682 (5%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +L EL L + Y+ DAP + DA YD L RE L HP+L + +VGAAP Sbjct: 17 RLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLA---AALDQVGAAP 73 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSILY 125 AF ++RH +PMLSLDNVF+ F+ F ++ L + + E K+DGL++S+ Y Sbjct: 74 SGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTY 133 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 EN V ATRGDGT GED+T N+RT+R +P L ++ P +E+RGEV++ + F +N Sbjct: 134 ENRRFVRGATRGDGTEGEDVTENLRTLRELPATLP-DDAPDFIEIRGEVYMTKTDFITLN 192 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + R FANPRNAAAGSLRQLDP +TA R L+ F Y G + +TH L Sbjct: 193 QGQARQ----FANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQA-VGETHWDYLAI 247 Query: 246 FKKWGLPVSDRVTLCESAEEVLA--FYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 ++WG PV+ L E E A F + E R L +DIDGVV K++ LA QE+LGF Sbjct: 248 LRRWGFPVN---PLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFA 304 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 RAPRWAVA+KFPA+ +T + ++ QVGRTGA+TP ARL+PV+V GVLVS+ATLHN DE Sbjct: 305 GRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDE 364 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I R +RIGD V ++RAGDVIPQ++ + RP D+ VFP HCPVCG+ R GE V Sbjct: 365 IARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGEVV 424 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TAGK 481 RCTGGL C AQ E L HF SR A D++GMG+K + + ++ +PAD+F L Sbjct: 425 RRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDREAA 484 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL----EA 537 + LE G SA+ ++ A++ + + ARF+YALGIR +GE A LA ++ + Sbjct: 485 IAALEGWGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWRRQ 544 Query: 538 LEAASI------EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 +E A + EL + +G +A + FFAE NR+++ L+ P++ Sbjct: 545 MEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLV--------PMLTIE 596 Query: 592 EEI---DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 +E+ AGKT+V TG+L ++R +AKAR LGA+V SVSKKTD V+ G AGSK Sbjct: 597 DEVAAAGGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSK 656 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 AKA LG+ V+ EAE L G Sbjct: 657 AAKAASLGVTVLSEAEFRSLAG 678 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust. Identities = 231/577 (40%), Positives = 364/577 (63%), Gaps = 5/577 (0%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I+ ++ LR + Y+V + + D +YD + EL ELE K+ + + V Sbjct: 10 IKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIVA 69 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F +I+H MLSL+++F+ ++ L F+++V+ L NEK +CCELK+DGLA+++ Sbjct: 70 KNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAINL 129 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIP--LKLHGENIPARLEVRGEVFLPQAGF 181 +Y+NG+L SA+TRGDG GED+T N I++IP LK + + P ++E+RGEVF+ + F Sbjct: 130 IYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFPKKIEIRGEVFIKLSTF 189 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG-VLEGGELPDTHL 240 KIN+ + K+F+N RN A+GSLRQ++P+IT R L+F+ YG+G V E D H Sbjct: 190 NKINKMLKSKRKKLFSNARNMASGSLRQINPKITKNRSLSFYGYGIGYVNEKKYYYDQH- 248 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L WG+P+ LC+S EV FY K + R L F+IDG+V+KVNS+ Q++L Sbjct: 249 DALKLINSWGIPIEKNTELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQKKL 308 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ PRWA+A+KF ++E+ T + V F VGRTG ITPVA+L+PV+ G ++ ++LHN Sbjct: 309 GCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSLHN 368 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I++LG+ I D V ++++GDVIP++ V+ +R ++ +E++FP C C S +E Sbjct: 369 KDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKR-KNVKEIIFPKTCIFCKSKIEFCLR 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + CTGG +C AQRK+ L HFVSR A+++ GMG+KII QL+EK+ + P+D+FKL Sbjct: 428 KKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSDIFKLNTD 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 K+ L+ MG KS++N++ + K+K T R +Y +GI VG T+ LA Y+ + Sbjct: 488 KIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYKNISNFIN 547 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL 577 S E+L+ + +G ++ + F ++ N ++IS+LL Sbjct: 548 TSYEDLRSIKGIGSFTSNCIKKFLKDKRNISIISDLL 584 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 275/669 (41%), Positives = 396/669 (59%), Gaps = 16/669 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q T+LR +R H+Y Y++ +P I D YD L L+ LE L T SPT+R Sbjct: 72 EAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIF-NLDTEASPTRR 130 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG PL + H MLS+D +S F++RV+D + + E + CE K DGL+V Sbjct: 131 VGGEPLDELETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVGDLE---YICEPKFDGLSV 187 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE+G + AATRGDG G+D+T+ V T+ A+PLKLHG+ P+ L VRGEV++P+AGF Sbjct: 188 EVIYEDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHGD-YPSYLAVRGEVYMPKAGF 246 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + N + K FANPRNAAAG+LRQLDP + A+RPL+ F Y + L+ ELP Sbjct: 247 REYNRERIECDEKPFANPRNAAAGTLRQLDPGVVAERPLSCFFYDI--LDATELPPDQWT 304 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + WGL +DR++ +S ++ +A+ +++ R L ++IDG VIKVN +E LG Sbjct: 305 TLNDLQSWGLRTNDRISRVDSIDDAIAYRDQLKAARAELNYEIDGTVIKVNDRGNREILG 364 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +R+ RWA A+KFP + ++T + D+ QVGRTG +TPVA L+PV V GV VS A+LHN Sbjct: 365 ATSRSVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNP 424 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 +EI+RL + GD+V +RRAGDVIP+V V + T FP CP+C S VE + Sbjct: 425 EEIKRLSVNSGDEVRVRRAGDVIPEVAEVT---QKRATGTFNFPNQCPICHSSVE--QDG 479 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 +A CTGGL C AQ ++ H+ SR A+D+DG+G++ ++QLVE + ADL+ L+ Sbjct: 480 PLAFCTGGLTCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVAD 539 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L+ L+ G SA+N++ A+ + + + FL LGI EVG A LA F +A+ A Sbjct: 540 LSKLDGWGTTSAENLIQAISETQTPSLTDFLVGLGIPEVGPTIARNLAGTFDNFDAIIDA 599 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 L+++ D+G V++H+ FF E NR I LL+ GV + ++P + Sbjct: 600 DEAALREIEDIGPTVSTHISEFFTNEQNRAAIDNLLSAGVT--PQTQQSTATTNAPLSDL 657 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVI 660 T V TGSLS + R A + G GSVS TD ++ G+ GS K A+ + I Sbjct: 658 TFVFTGSLS-VPRTTATTYIERHGGNATGSVSSNTDYLVIGDNPGSTKRIDAERNDVPEI 716 Query: 661 DEAEMLRLL 669 DE E LL Sbjct: 717 DETEFTELL 725 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 280/680 (41%), Positives = 404/680 (59%), Gaps = 26/680 (3%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ LR + H Y Y+V+ PEI D +YD ++ +L LE + PEL T DSP+QRVG Sbjct: 9 EIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSPSQRVGGGI 68 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGLAVSIL 124 F + H PMLSL N + E F RV L ++ + + ELK DG+AVS+L Sbjct: 69 TKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEHRDSPEFVAELKFDGVAVSLL 128 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL-----HGENIPA----RLEVRGEVF 175 Y +G+LV ATRGDG+ G+DIT N+RTIR++PL+L GE + +EVRGEVF Sbjct: 129 YRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGREIEVRGEVF 188 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +NE R + FANPRNA AG+L+ D ++R + F Y + E Sbjct: 189 MTKTDFAVLNEG--RPEEERFANPRNATAGTLKLQDSGEVSRRKMVFVAYYLK--ESSAE 244 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPT-LGFDIDGVVIKVNSL 294 +H RL ++ G +C + +++ + ++ R T L ++IDG+V+K+N+ Sbjct: 245 IISHAERLELLERLGFYTGGEHRVCRTLKDIREYIDGWQKKRLTGLPYEIDGIVLKLNNT 304 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A +++LG +++PRWA+A+KFPA+ T +R + FQVGR G ITPVA LEPV +AG VS Sbjct: 305 ALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPVRLAGTTVS 364 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 +TLHN +E+ERL +R+ D VVI ++G++IP+V++VV +R T VV P CP CG+ Sbjct: 365 RSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVVEEKRRPGTLPVVVPESCPSCGTP 424 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + + E C C AQ K ++HF SR AMD++G+G I++QLV V DL Sbjct: 425 LVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLVSSGMVVDAGDL 484 Query: 475 FKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 ++LT + L+R KSA N+VNA+ K++ + R L+ALGIR VG ATA LA + T Sbjct: 485 YRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGIRHVGIATARELAGAYPT 544 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 L+ L AS+E L V DVG V+A VH FF + S +I +L GV + AE+ Sbjct: 545 LDMLCKASVEALSDVTDVGPVIAESVHAFFRKPSATAMIEKLREAGVR------LEAEKT 598 Query: 595 DSP----FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 P F G V+ TG+L + +RD+A + E G K SVSK T+LV+ G+ GSKL Sbjct: 599 KKPVNLNFDGMKVIFTGALERYTRDEAAGLVRERGGKTVASVSKNTNLVVYGKEPGSKLE 658 Query: 651 KAQELGIEVIDEAEMLRLLG 670 KA++LG+ VI E+E +LG Sbjct: 659 KARKLGVRVITESEFEEMLG 678 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust. Identities = 282/675 (41%), Positives = 411/675 (60%), Gaps = 17/675 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++++LTELR T+R+H Y+ D PEI D EYD+LM L+ +E K+PELIT +SPTQ Sbjct: 10 IQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPTQ 69 Query: 61 RVGA-APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG A A ++H+VPMLSL +VF +E AF + +Q L+ E + E K+DGL Sbjct: 70 VVGGQARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQELEAPE---FVVEEKIDGL 126 Query: 120 AVSILYENGVLVSAATRGDGTT-GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 ++++ YE+G LV A TRGDG GED+T N + I + KL + E+RGEV++ + Sbjct: 127 SMALRYEDGELVRAITRGDGIVQGEDVTENAKVIHDVKKKLKDKL--PYFEIRGEVYMEK 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F+ +N G K FANPRN AAG+LRQLD RIT +R L+ F + + G T Sbjct: 185 KAFDAVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNLQTARGRTFT-T 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H KK G+ V +C +A+EV + E+R L +DIDG V+K+N+LA +E Sbjct: 244 HTEAYDFMKKQGIKVIHGYKVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLADRE 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG A+ PRWA+A+K+P +E+ T +R +E VGRTG ITP A +P+ + G V ATL Sbjct: 304 KLGATAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I+ L +RIGD V + ++G++IP+V VV +RP T V T CPVCG+ R Sbjct: 364 HNQDFIDNLDVRIGDTVRVYKSGEIIPKVKEVVKEKRPAGTEPFVIGTTCPVCGAPAVRE 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + +C C AQ + + +FV R AMD+ G+G+ I +L+E ++ T ADL++L Sbjct: 424 PDTSDIKCKNPS-CPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLYRL- 481 Query: 479 AGKLTGLERMG----PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 GK L G K+ V+ A+E +KE R L LGI +G A L +FG+ Sbjct: 482 GGKREELIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIPGIGRTAARELMLHFGS 541 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 ++AL AS EE+ +V D+G + A + +F + +++ +++ A GV++ + + + Sbjct: 542 IDALAKASEEEILEVRDMGEISAKAIVQYFNDPASQKILAAFRAAGVNF---TLEDTGLV 598 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 D FAGKT V+TG+L +SR DA A + G +VAGSVSKKTD ++AGEAAGSKL KA + Sbjct: 599 DEKFAGKTFVITGTLPSLSRKDAAALIESHGGRVAGSVSKKTDYLVAGEAAGSKLQKATD 658 Query: 655 LGIEVIDEAEMLRLL 669 LGI ++DEA + LL Sbjct: 659 LGITILDEAGLQALL 673 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/667 (39%), Positives = 396/667 (59%), Gaps = 9/667 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ +++ LRT L Y+ DAPE+ D YD+ L ELE PE++TPDS TQ Sbjct: 6 LDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPDSITQ 65 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F+++ H +PMLS+ +VF ++ F++R+Q + V + ELK+DGL+ Sbjct: 66 RVGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLV--GHPVEYNVELKIDGLS 123 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y++G LV A+TRG+G GED+T+N R I IP L P +EVRGE ++ + Sbjct: 124 LSLEYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPE---PLTIEVRGECYMGKEA 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F K+N++ G VFANPRNAAAGSLRQLDP++T KR L+ F Y V E+ H Sbjct: 181 FAKLNQEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIY-TWVNPPREITSQHQ 239 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + + G ++ + +EV F + R +L + IDG+V+KV+ L+ ++QL Sbjct: 240 A-IERMHELGFHTNETGRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQL 298 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G + PRW +A+KFP +EQ T VRD+ + VGRTG +TP A ++PV +AG V+ A+LHN Sbjct: 299 GNTVKVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHN 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D + G+RIGD V + +AGD+IP++ VVLS+RP D+ PT CP CG + +E Sbjct: 359 PDYLNEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLED 418 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ +E + HF SR AM++ G+G KI+ QL+ K+ VH ADL+ LT Sbjct: 419 EVALRCINP-SCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTED 477 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+ KS N++ A++ +K+ + + LGI VG A +A F LE + + Sbjct: 478 DLAQLDHFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMS 537 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI-DSPFA 599 ++++ + +G+ A + +FA+ + +I EL G++ EE D+PF Sbjct: 538 LGVQDIASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMDYLGADEPEEAPDNPFK 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 KTVVLTG L +R + +L LGAKV GSVS KTD VI G+ AGSK KA++LG+ + Sbjct: 598 DKTVVLTGKLEHYTRSEFTKKLQALGAKVTGSVSHKTDYVIYGKDAGSKYNKAEQLGVPL 657 Query: 660 IDEAEML 666 + E E + Sbjct: 658 LTEEEAI 664 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/565 (47%), Positives = 352/565 (62%), Gaps = 35/565 (6%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +L L + H Y+ DAP+I DAEYD L + +E K PEL++ DSPTQ+VGAAP Sbjct: 23 ELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDSPTQKVGAAP 82 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKV-TWCCELKLDGLAVSIL 124 F++++H VPMLSL N F ++ F RV+ LK + E++ E K+DGL++S+ Sbjct: 83 ARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKIDGLSLSLR 142 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE+G LV AATRGDG TGED+T+NVRTI+ IP L PA E+RGEV++ ++ F + Sbjct: 143 YEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVYMLKSDFLAL 202 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD-THLGRL 243 N+ G FANPRN+AAGSLRQ D ITA RPL FF Y G E +LP+ T G L Sbjct: 203 NQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWG--EFSDLPEATQYGML 260 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 K+ G V+ +TLC+S ++ LAFY K+ E+R TL +DIDGVV KV+ L QE+LGF Sbjct: 261 GWLKRAGFTVNPLITLCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLDWQERLGFA 320 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 RAPRWA+A KF A++ T + +E QVGRTGA+TPVARL PV V GV+V NATLHN D Sbjct: 321 GRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQNATLHNEDY 380 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER--VEGE 421 I+ L + IGD VV++RAGDVIPQ+V+VV +RPED FP CP CGS R EGE Sbjct: 381 IKSLDIHIGDTVVVQRAGDVIPQIVSVVRDKRPEDAEPYEFPKFCPACGSHAVRDEDEGE 440 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG- 480 AV RCTGGLIC AQ E L+HFVSR A D+ G G+ ++ L E+ V PAD+F L + Sbjct: 441 AVRRCTGGLICPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPADIFALHSKV 500 Query: 481 -------------------KLTGLERMGPKS--------AQNVVNALEKAKETTFARFLY 513 + TG +R S +N++ A++ + F RF++ Sbjct: 501 DELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDARRTVAFNRFIF 560 Query: 514 ALGIREVGEATAAGLAAYFGTLEAL 538 LGIR VGE T+ L +F ++A Sbjct: 561 GLGIRHVGEVTSKALVRHFADVKAF 585 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 29/241 (12%) Query: 453 GMGDKIIDQLVEKEYVHTPADLFKLTAG-KLTGLERMGPKSAQNVVNALEKAKETTFARF 511 G+G + + ++ K V AD+ G L R GP A + + E T R Sbjct: 561 GLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGP--AWLDLKNVRYIGEITLERL 618 Query: 512 LYALGIREVGEATA---------AGLAAYFGTLE----ALEAA-------SIEELQKVPD 551 L G + E A L +++G E AL+AA + ++L + Sbjct: 619 LEIQGGADTNEERQGFQPDARQRASLLSHYGNEEKIAGALQAARSEAPGPAFQQLANDSE 678 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAE-GVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G V + +FF E +NR V++ L+ + V PA A SP +GK VV TG+L Sbjct: 679 IGEVATQSLIDFFEETNNRQVVTALMDQVQVERPA-----AASAKSPISGKIVVFTGALE 733 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + +RD+AKA LGAKVA SVS KTDLV+AG +AGSKL AQ+ G++V+ E E + G Sbjct: 734 RTTRDEAKAIAERLGAKVASSVSSKTDLVVAGPSAGSKLRDAQKFGVKVLTEEEWAEISG 793 Query: 671 S 671 + Sbjct: 794 N 794 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/684 (39%), Positives = 405/684 (59%), Gaps = 28/684 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E E + +LR +R+H++ Y+V+ P I D EYD+L L+++E++ PELITPDSPTQR Sbjct: 29 EDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPELITPDSPTQR 88 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V + F Q++H PMLSLDN ++EE F++RV++ + + + + E K DG + Sbjct: 89 VPSELTKEFPQVKHLAPMLSLDNSYNEEDLREFDRRVREAV-GIDIIEYAVEPKFDGAGI 147 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLK----LHGENIPARLEVRGEVFLP 177 S++YE + V ATRGDG GEDIT N+R I+ +PL ++G + R+E+RGEV + Sbjct: 148 SLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYGID---RIEIRGEVLIN 204 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL---EGGE 234 + F++IN G ANPRNAAAGSLR DP+ AKR L F Y + +G Sbjct: 205 KEKFKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITYAVDKDGNN 264 Query: 235 LPDTHLGRLLQFKKWGLPV---------SDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 L LG L++ + + + +C +EV+ + + E R ++ID Sbjct: 265 L----LGNKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYPYEID 320 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 G+VIKVN ++ ++LG + PRWA+AFKF A++ T + V FQVGRTGA+TPVA+LEP Sbjct: 321 GMVIKVNDISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVAKLEP 380 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V + GV VS+ +L N D I+ +R+GD V+I RAGDVIP VV VV R + + FP Sbjct: 381 VEIGGVTVSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKPIQFP 440 Query: 406 THCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP CGS + + GEAV RC + C AQ E + +F S+ AMD+ G+G+ I + + Sbjct: 441 KECPSCGSPLVKPAGEAVWRCI-NINCPAQVVERIIYFASKDAMDIRGLGEANIRKFYQL 499 Query: 466 EYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 ++ + D+++L K+ LE G KS +N+ A+E++K R + LGIR VG+ TA Sbjct: 500 GFLRSIPDIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGKVTA 559 Query: 526 AGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA 585 LA +E L+ S+E+L+++PDVG VVA +++FF N +I EL GV Sbjct: 560 RTLAENINCVEDLKDWSVEDLERLPDVGYVVAHSIYDFFHNPDNIKMIQELKRLGVQTCK 619 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 E +++ F GKT V TG+LS SR+ A+ + LG + SVS+KT V+ GE Sbjct: 620 E---KEEVVENIFEGKTFVFTGTLSCCSREIAQEIVERLGGHASSSVSRKTSYVVVGENP 676 Query: 646 GSKLAKAQELGIEVIDEAEMLRLL 669 GSK KA LG++++DE + + ++ Sbjct: 677 GSKYRKALSLGVQILDEKQFIEMI 700 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 283/680 (41%), Positives = 398/680 (58%), Gaps = 19/680 (2%) Query: 1 MESIEQQ--LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M +E Q + ELR + H+ LYH P+I D EYD L REL ELE P+ SP Sbjct: 1 MTPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 T++VG F RH M+SLDN + E F+ R+ L+ + + + E K+DG Sbjct: 61 TEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERD-GLKFVIEPKIDG 119 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVF 175 LAVSI YE G LV A TRG+G G+DIT+N TI+++P +L G +PA +E+RGEVF Sbjct: 120 LAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVF 179 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-GGE 234 L F +IN G ++ANPRN AAG+++QLDPR A+R L YG G +E Sbjct: 180 LTTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASA 239 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 LP+T K WGLP +R A+E+ A +++ R T + DG V+K++++ Sbjct: 240 LPETQAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAV 299 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 Q + G +++PRWA+A+KF T +R + QVGRTG +TPVA L+PV +AG VS Sbjct: 300 PLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVS 359 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN DEI R +R+GD V + +AG++IP V+ V + R + VFP CP CG+ Sbjct: 360 RATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTA 419 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 V ++EGE RC C Q + ++HF S+ +D++GMG+ ++D LVEK +VH+ D+ Sbjct: 420 VVQLEGEVAVRCP-NFSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDI 478 Query: 475 FKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 ++L L L + KS ++ A+E +K RF++ LGI G A A LA FG Sbjct: 479 YQLKRENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGG 538 Query: 535 LEALEAASIEELQK-----VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 LE L +A E+ + + +G +A + +FAE NR V+ EL+ GV P+V Sbjct: 539 LERLASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQ---PVVP 595 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 N+ S AGKT VLTG+L ++RD+A A++ G KV+ VSKKT V+AGE AGSKL Sbjct: 596 NS---GSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKL 652 Query: 650 AKAQELGIEVIDEAEMLRLL 669 KA+ L + VIDEAE LRLL Sbjct: 653 EKARALAVPVIDEAEFLRLL 672 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust. Identities = 276/669 (41%), Positives = 388/669 (57%), Gaps = 23/669 (3%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL+ L LY+ + D ++D ++E+ LE K+PEL S TQ+VG+ Sbjct: 14 ELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPELRGKGSLTQKVGSDLTND 73 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN----EKVTWCCELKLDGLAVSILY 125 F+++ H VPMLS+ NV+ EE F K ++ L + W CE K+DG+++S++Y Sbjct: 74 FAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICERKIDGVSLSVIY 133 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIP-------LKLHGENIP-ARLEVRGEVFLP 177 ENG L AATRGDG G+D+T N TI IP LK+ IP EVRGEV++ Sbjct: 134 ENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQGTFEVRGEVYME 193 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FE++NE K F N RN +GSL+ RP+ FF Y + Sbjct: 194 REAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYHIPQSNN----K 249 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 TH L Q K+ G +D T ++ +E++A K+ R +L FDIDG+V+K+N L QQ Sbjct: 250 THEENLKQLKRLGFHTNDYWT-ADTVDEIMAISEKIGASRDSLPFDIDGMVVKLNDLQQQ 308 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG +++PRWA+A+KF A+ T + VEFQVGRTGA+TPVA L PV +AG V AT Sbjct: 309 RELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLAGTTVKRAT 368 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE+ RL L GD V + + G++IP++ +V RP VV P CPVCG + Sbjct: 369 LHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCPVCGEQLTH 428 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 ++GE + RC L C AQ + +HFVSR AM+++ +G +I L+ + DL++L Sbjct: 429 IDGEVILRCE-NLHCKAQVQCLFEHFVSREAMNIENLGPALIASLLATGKIKRIPDLYRL 487 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T L ERM KSA+NV +A++ +K+ + L+ LGIR VG +A +A +F TLE Sbjct: 488 TLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRTSARNIAKHFRTLEK 547 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A++EELQ V DVG + V+ FF N I EL+A G+ V+ + Sbjct: 548 IRTATVEELQNVTDVGERIGKSVYEFFHTPLYTNEIDELVALGLPTEFKGVVK-----TL 602 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F G+T V+TG+L M RD+A+ + E G KV+GSVSKKT V+AGEAAGSKL KA ELGI Sbjct: 603 FQGQTAVITGTLPNMDRDEARKLIEENGGKVSGSVSKKTSWVLAGEAAGSKLTKANELGI 662 Query: 658 EVIDEAEML 666 V DEA ++ Sbjct: 663 PVHDEAWLM 671 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 218/580 (37%), Positives = 364/580 (62%), Gaps = 3/580 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH---PELITPDS 57 M+ I Q+ +L+ +++H Y+YH +D+P I D YD L +L +LE + L Sbjct: 1 MKDIYNQILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIK 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 +VGA L F++ H++PMLSL ++ + F F+K++++ K+ +T+ C+ K D Sbjct: 61 LLDQVGAKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFD 120 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLAV++ Y+NG+L+SA+TRG+G+ GE+IT N+ I +IP K+ G NIP ++E+RGE+F+ Sbjct: 121 GLAVNLFYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMR 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 ++ F +N+ + +G K F+NPRNAAAGS+RQL+P I KR L FF YG G+ + + D Sbjct: 181 KSDFFILNQSCKLSGKKEFSNPRNAAAGSVRQLNPEIVKKRKLNFFVYGFGLFDYNKKID 240 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +H RLLQ KKWG P+ +C++ +EV+ FYH + R L F+IDG+VIK++S+ Q Sbjct: 241 SHYQRLLQIKKWGFPLYKNYCVCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQ 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG + + P+WA+A KF + ++ T + + F+VGRTG ITPVA P+++ GV +S A+ Sbjct: 301 NNLGCIEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N I+ L +R+ D V + RAGDVIP++ NV++ +R + T++++ PT+CP C + + Sbjct: 361 LYNIKTIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIF 420 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C C +Q + L +F S+ ++ G+G K I +L+ Y++TP D F L Sbjct: 421 SDDLKTCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSL 480 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T KL + RMG K ++ ++ + +K + +F+ +LGI VG + A LA Y+ ++E Sbjct: 481 TVKKLKNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGIFGVGTSIAKRLAYYYRSVEK 540 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL 577 + + L K+ +G +++ + +F +SNR++I +L+ Sbjct: 541 FFNTNYDTLSKIDHIGYNISNAIISFLKNKSNRSIILKLI 580 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 295/717 (41%), Positives = 406/717 (56%), Gaps = 57/717 (7%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ L +R H + Y+ DAP I DAE+D L R L +E HPEL+ DSPTQ V Sbjct: 50 AVREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQEV 109 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVF---DEESFLAFNKRVQDRLKNNEK-VTWCCELKLDG 118 G AAF+ + H M SL++VF + ES++A + +L N W ELK+DG Sbjct: 110 GGEVSAAFAAVEHLQRMYSLEDVFSLEELESWIAKAEASVAKLGNGTAGPAWLTELKIDG 169 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LAV++LY +G LV AATRGDG TGEDIT NV TI+ IP +L G N PA +EVRGEVF+P Sbjct: 170 LAVNLLYRDGKLVRAATRGDGYTGEDITHNVLTIKEIPQQLTGGNYPAEMEVRGEVFIPS 229 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL--- 235 F + NE G ANPRNAAAGSLRQ DP TAKRPL + +G+G EG Sbjct: 230 KAFAEYNEALIEAGKAPLANPRNAAAGSLRQKDPAETAKRPLRMYVHGIGAREGLRTVSQ 289 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 DT+ Q +WGLP S + S +++L F + + R +L +IDG+V+KV+ A Sbjct: 290 SDTY----RQLAEWGLPTSPYFEVLGSLKDILDFIKRYGDKRHSLTHEIDGIVVKVDDFA 345 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q LG+ +R PRWAVA+K+P +E T + D+ VGRTG +TP +EPV VAG V Sbjct: 346 TQRALGYTSRVPRWAVAYKYPPEEVHTKLLDIAVNVGRTGRVTPFGIMEPVKVAGSTVGM 405 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED---TREVVFPTHCPVCG 412 ATLHN D ++ G++IGD VV+R+AGDVIP++V VL+ R + R+ V PT CP CG Sbjct: 406 ATLHNQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRDQQDPPVRDFVMPTECPACG 465 Query: 413 SDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + + EG+ RC C AQ +E + H SR A D++ +G + L + TP Sbjct: 466 TPLAPGKEGDVDIRCPNSRSCPAQLRERVFHVASRGAFDIEALGWEAAIALTQPAEPVTP 525 Query: 472 -----ADLFKLT---------------AGKLTGLERMGP---------------KSAQNV 496 A+LF+LT G TG + P + + + Sbjct: 526 PLTSEANLFRLTREDLADVRIRREKRSKGVATGEFELVPYFYTKGTAKSPSKPTATTEKL 585 Query: 497 VNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVV 556 LEKAK R L AL IR VG + LA FG+++A+ AS EEL V VG V+ Sbjct: 586 FTELEKAKSQPLWRVLVALSIRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVI 645 Query: 557 ASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP--FAGKTVVLTGSLSQMSR 614 A+ + +FAE+ +R ++ +GV + + ++ +P G TVV+TGSL SR Sbjct: 646 AAALKEWFAEDWHREIVDTWAEDGVR-----MEDEQDESTPRTLEGLTVVVTGSLEGFSR 700 Query: 615 DDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 D+AK ++ G K +GSVSK T V+AGE AG+KL KA++LG+ V+DE LL + Sbjct: 701 DEAKEAILIRGGKASGSVSKNTSYVVAGENAGTKLDKAEQLGVPVLDEDGFRALLAN 757 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 295/728 (40%), Positives = 399/728 (54%), Gaps = 66/728 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++ T+L + H LYH DAP+I DAEYD LMREL +E HP L T DSP+Q Sbjct: 15 FDAARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPSQ 74 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG F+ +RH + SLDN F E A+ +RV + + CELK+DGLA Sbjct: 75 QVGGDVSELFASVRHAERLYSLDNAFSPEELTAWVERVTAEVPGE---AYLCELKIDGLA 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 V++ YENGVLV ATRGDGTTGEDIT NVRTI +IP KL G +P +E+RGEVF+ Sbjct: 132 VNLTYENGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVEIRGEVFMS 191 Query: 178 QAGFEKINED-------------ARRTGGK-------VFANPRNAAAGSLRQLDPRITAK 217 FEK+N D R+ GK ++ANPRNAAAGSLRQ DP ITA Sbjct: 192 TESFEKLNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQKDPTITAS 251 Query: 218 RPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR 277 R L+ YG G G E P K WGLP S + ++ E V + E R Sbjct: 252 RALSMTVYGFGARRGFE-PTHQSQGYAALKAWGLPTSSYFKVLDTVEGVTEYIEHYGEHR 310 Query: 278 PTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAI 337 + +IDGVVIK++ +A Q +LG RAPRWA+A+K+P +E T +RD++ VGRTG Sbjct: 311 HDIEHEIDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKVSVGRTGRA 370 Query: 338 TPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE 397 TP A LEPV VAG V ATLHN D ++ G+ IGD+V+IR+AGDVIP+V+ V R Sbjct: 371 TPYAVLEPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLGPVEGARTG 430 Query: 398 DTREVVFPTHCPVCGSDVERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 D E V P++CP CG+++ ++ EG+ RC C AQ +E L + R +D+DG+G Sbjct: 431 DEHEFVMPSNCPECGTELRQMSEGDIDLRCPNARSCPAQLRERLSYLTGRSCLDIDGLGY 490 Query: 457 KIIDQLVEKEYVHTP-----ADLFKLTAGKL-----------TGLERMGPKSAQN----- 495 LV+ P DLF LT +L +GL + PK+ ++ Sbjct: 491 VACTALVQPLEPKQPPLADEGDLFNLTMEQLLPIKSLVLDPDSGLPKKDPKTGKDKEVTY 550 Query: 496 --------------VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 ++ +E AK+ R + L IR VG A LA FG L+A+ A Sbjct: 551 FATQDGAPKAGATKMLEGIEAAKQQELWRIINGLSIRHVGPVAARALATEFGDLDAIRDA 610 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 E L V VG +A+ V +FAE+ + ++ + A GV + + E + AG Sbjct: 611 DEERLAAVDGVGPTIATAVKQWFAEDWHVEILEKWRAAGVRF---VEERPEAGERHLAGL 667 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TGSL +RD A + G KV+GSVSKKT V+ G++ GSK KA +LG+ ++D Sbjct: 668 TVVITGSLEGWTRDGAAEAVRVRGGKVSGSVSKKTSFVVVGDSPGSKYDKAVKLGVPILD 727 Query: 662 EAEMLRLL 669 LL Sbjct: 728 TEGFATLL 735 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 267/658 (40%), Positives = 390/658 (59%), Gaps = 25/658 (3%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA-----AFSQIRHE 76 Y+ D P + D YD L LE +P L PDSPTQ V A ++ H Sbjct: 36 YYEEDNPSVEDYVYDAHYARLVALEKAYPSLAMPDSPTQHVAAGNQTKNDSRGLQKVVHP 95 Query: 77 VPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATR 136 VPMLSL +VF + L ++ + +K + ELK+DGLA+S+ YENG L+ A+TR Sbjct: 96 VPMLSLGDVFSIQELLDWDLVTTKNAGSQQK--YNLELKIDGLAISLRYENGRLIQASTR 153 Query: 137 GDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVF 196 GDG+ GE++T NV+TI IP L N P +EVRGE+++ + F +N+ G +F Sbjct: 154 GDGSIGENVTDNVKTITEIPKVL---NEPLTIEVRGEIYMRKEAFADLNQQRDEEGKTIF 210 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYG------VGVLEGGELPDTHLGRLLQFKKWG 250 ANPRNAAAGSLRQLDP+ITAKR L+ F Y +GV +T L +F++ G Sbjct: 211 ANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQNDVLGV-------NTQSDVLERFRQLG 263 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 PV+ + + EV + + R L + IDGVV+KVN L + +LG + PRW+ Sbjct: 264 FPVNSSNKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKVNDLDVENELGNTVKIPRWS 323 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+KFP +E +T VRD+ + VGRTG +TP A ++PV +AG V A+LHN D ++ +R Sbjct: 324 IAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAGTKVKRASLHNPDYLQEKDVR 383 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 IGD V + +AGD+IP+V V+L +RP D + P +CP C S + V+GE RC Sbjct: 384 IGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPSCKSKLVHVQGEVALRCINPE 443 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C AQ KE L HF SR AM++DG+G ++++QL+ K + +DL+ LT +LT L++ Sbjct: 444 -CPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIRKISDLYALTESQLTTLDKFAD 502 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 S++N++ A++++++ + R + ALGIR VG A LAA+F L L+ A EE+ ++ Sbjct: 503 LSSKNLIQAIDRSRQNSVERLITALGIRGVGAKAAKVLAAHFKNLRNLQNAGAEEIAEID 562 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 VG V+A + +F ES ++I+EL V++ +E + F K +VLTG L Sbjct: 563 GVGQVMADAIRQYFNSESVASLINELENFQVNFDYLTTSTVDEKNY-FFNKRIVLTGKLI 621 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 +R +A L E GA V+ SVS KTDL+IAG GSKL +A +LGI+VI+E + + L Sbjct: 622 HWTRPQMQAWLEEHGANVSSSVSSKTDLLIAGSDVGSKLERANKLGIKVINEQDFINL 679 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 262/671 (39%), Positives = 388/671 (57%), Gaps = 8/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +++ L + +H LY+ PEI D E+D+L+ +L LE + P+L P+SPTQR Sbjct: 4 EQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P F+ + H+ PMLSL N + E + F KR +L + + CELK DG+A+ Sbjct: 64 VGGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPG-ATIEFFCELKFDGVAI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LY+ G L TRGDG G+DIT N + I IP + +++P EVRGE F+ A F Sbjct: 123 SLLYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFEVRGEAFMSLADF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-ELPDTHL 240 EK+N D G + ANPRNA AG+L+ L KR L CY +L +LP TH Sbjct: 183 EKLNRDRLAHGLEPLANPRNATAGTLKTLK-STGPKRWLD--CYMYSLLSTDMDLP-THE 238 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + +KW VS C + EEV+A+ E + +L IDGVVIKVN QQ +L Sbjct: 239 VCIQWLEKWCFHVSPTYKKCRTLEEVMAYIEYWESAKNSLPVAIDGVVIKVNDTLQQNKL 298 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A++PRWA+A+K+ + T + V++QVGRTG ITPVA L+P+ +AG +V ATLHN Sbjct: 299 GLTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVKRATLHN 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 A EI+RL L +GD V I + G++IP++ +S+R D+ V F THCP CG+++ + Sbjct: 359 AGEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLDSEPVKFVTHCPACGTELVKRYE 418 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 +A+ C C Q + LKHFV R+AMD+ +G + I+ L+ + VHTPADL+ L Sbjct: 419 KALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPADLYSLKYQ 478 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + LE + +NV++ +E +K+ F R L+ALGIR VGE A + Y+ ++ L Sbjct: 479 DIRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKITQYYTDIDTLSN 538 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-PFA 599 A++E+L +P +G +A V N+F N +I L G+ P + S P + Sbjct: 539 ATVEDLIAIPFIGTEIAHSVTNYFENPENLALIDVLKQAGLQLSRPQLATVFATQSLPLS 598 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIE 658 GKT V++G+ R++ K + + G + ++S K + +I GE G K+A+AQ LGI Sbjct: 599 GKTFVISGTFQNFEREELKELIKKKGGGILTNISAKLNYLIIGENPGPGKVAQAQALGIS 658 Query: 659 VIDEAEMLRLL 669 I+E E+L++L Sbjct: 659 TINETEILQML 669 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 275/680 (40%), Positives = 397/680 (58%), Gaps = 33/680 (4%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++L +L L+ H+ LYH DAPEI DA+YD L++E REL K PEL + +GA Sbjct: 8 RRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDYEGVIGAL 67 Query: 66 PL-AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKV--TWCCELKLDGLAVS 122 + A +I H PMLSL+N F + F RV+ L + +V T CE K+DGL+ + Sbjct: 68 TVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPKIDGLSFA 127 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 LYE G L+ ATRG+G GEDIT+ + IR +P K+ N P LEVRGE+++ + FE Sbjct: 128 ALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKI--ANAPEVLEVRGEIYMHHSDFE 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV--GVLEGGELPDTHL 240 K+ + FANPRNAAAGS+RQL+P+I +R L + Y + L E Sbjct: 186 KLKDVCN------FANPRNAAAGSIRQLNPKIAEERNLRYVAYCIVNSALASQE------ 233 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q +WG V ++ ++ L+F+ ++ R TLG+DIDG+V KVN Q+ L Sbjct: 234 AILKQLAEWGFCTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLL 293 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ PRWA A KFP+ E +T +RD+ QVGRTG ITP+A LEP+++ G LVS A+LHN Sbjct: 294 GSTSKYPRWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASLHN 353 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT--REVVFPTHCPVCGSDVERV 418 +EI R +RIGD V+++RAG+VIPQVV V + R E VFP+HCP CGS + R Sbjct: 354 LNEIARKDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFPSHCPSCGSTLSRA 413 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF--- 475 GE RCT L C AQ E +KHFVSR +++ G+G+K I+ Y+ AD+F Sbjct: 414 PGEVAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFSLR 473 Query: 476 -KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 K++ L+ G KS ++NA+ + + F++ALGIR +G+ A +A ++ + Sbjct: 474 EKISHMNLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRS 533 Query: 535 LEAL-----EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 A A+ E+ + +G+ + FF+ E N V+ + L E ++ I Sbjct: 534 YSAWVRAMTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVL-QTLEEKLNILNEIA- 591 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 E SP +GKT+V TG L MSR++A LGAKV +V+ KTD+++AG +GSKL Sbjct: 592 -NTETASPISGKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGSKL 650 Query: 650 AKAQELGIEVIDEAEMLRLL 669 A++LGI+V++E+E LL Sbjct: 651 DTARKLGIQVMNESEWKDLL 670 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust. Identities = 284/673 (42%), Positives = 401/673 (59%), Gaps = 22/673 (3%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ EL L + Y Y+V+D P + D +YD+ EL+ LE K ++ P SPT R+G Sbjct: 6 ERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLE-KETGVVLPYSPTLRIGDI 64 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR----VQDRLKNNEKV---TWCCELKLDG 118 L F++ H+ + SLD + ++ R V D E + + K DG Sbjct: 65 VLDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIATKKFDG 124 Query: 119 LAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 L V++ Y E G+L +ATRG+G GE++T+ V+TI++IPLKL EN EV GE + Sbjct: 125 LTVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQ-EN-HDLFEVHGEAIMT 182 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 Q FEK N A N RN AAG+LR L+ + TA+R L+ F Y VG EG + Sbjct: 183 QEAFEKYNSSADSP----LKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEGYQFK- 237 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T+L + K+ GLPV D + +C S E++ +E+ R L +DIDG+VI ++ + + Sbjct: 238 TYLEMMDFIKEKGLPVDDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAIDDIRTR 297 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG+ + P+WA+A+KF AQE T + DVE+ VGR+G I P A LEPV +AGV V AT Sbjct: 298 ELLGYTVKFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVTVKRAT 357 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N D+I+R G+RIG V IRR+ DVIP+++ L E++ E+ PT CP CGS V Sbjct: 358 LNNMDDIKRKGVRIGADVFIRRSNDVIPEIMG-TLENTLENSEEIFPPTECPACGSHV-- 414 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 V A C L C Q +++ H+ SR AM++ G +K +QL EK + + +DL+KL Sbjct: 415 VLNGAHYFCENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSISDLYKL 474 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 L LE+ G K A+N++NA+E +KE F+YALGI VG TA + F +++ Sbjct: 475 KKEDLINLEKFGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKFKSIDG 534 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L+ A+ EEL V DVG +VA + FF EE + I ELL+ GV+ PI + ++S Sbjct: 535 LKNATFEELVSVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVN---PIFDEVKIVESI 591 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F KTVV TG+L SR + K +L LGAKV+GSVSKKTD VIAGE+AGSKL KA+ELG+ Sbjct: 592 FKDKTVVATGTLQNYSRTEIKTKLESLGAKVSGSVSKKTDYVIAGESAGSKLTKAEELGV 651 Query: 658 EVIDEAEMLRLLG 670 EVI E E ++LG Sbjct: 652 EVISEEEFEKMLG 664 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/674 (39%), Positives = 403/674 (59%), Gaps = 16/674 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I ++ +L+ L Y+V D P + D EYD ++EL LE +PE IT DSP+Q+ Sbjct: 4 EQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSPSQK 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F +I H+ PMLSL NVF+ + FL FN +V ++ NN + ELK+DGL++ Sbjct: 64 VGGTVSEKFLKITHKTPMLSLGNVFNFDEFLEFNTQVS-KVSNNLNNEYVAELKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++YENGVLVSAATRG+G GED+T+NVRTI++IPLK+ + R+EVRGE++L +A F Sbjct: 123 SLVYENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKISKK---ERVEVRGEIYLSKAEF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ +F NPRNAAAG+LRQLD +I A R L F Y + L Sbjct: 180 EKINQKRLLNNEDLFINPRNAAAGTLRQLDSKIVASRNLDAFLYYYISDDSPNL--NQYE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 +L+ + G + LC++ +++ A+ K + L + IDG+V K+N Q LG Sbjct: 238 SILKLNQLGFKTNKETMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F ++ P+WA+A+KFPA+ + T + D+ VGRTG IT A+LEPV + G +S ATL+NA Sbjct: 298 FTSKIPKWAIAYKFPAEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNA 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT-HCPVCGSDVERVEG 420 + I+ LRI V I++AGDVIP+V+ + E + EV P +CP C S +E+ E Sbjct: 358 EYIKSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNL-EVFQPILYCPNCHSLLEKNEN 416 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E C C + SL+HF SR AM++ +GD+ ++ L E + +D++KL Sbjct: 417 EVDQFCINS-SCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEY 475 Query: 481 K--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 K + +E G KS N+++++ +K + + L+ LGIR +G TA LA + ++ L Sbjct: 476 KDQILAIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNL 535 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINAEEIDSP 597 AS +EL ++ +G +A + ++F E N +I+EL + +++ IN+ DS Sbjct: 536 MKASYDELIQINSIGESLALSIIDWFKIEDNLKLINELKSFNINFNYLGAKINS---DSI 592 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 A KT V+TG+L++ R++ K + K++GS+SK+TD ++AG GSKL KA++LG+ Sbjct: 593 IANKTFVITGTLTR-PREEFKTLIENNAGKISGSISKQTDYLLAGNNVGSKLEKAKKLGV 651 Query: 658 EVIDEAEMLRLLGS 671 +IDE + LL S Sbjct: 652 IIIDEQQFFDLLKS 665 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 278/736 (37%), Positives = 409/736 (55%), Gaps = 76/736 (10%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q++ LR L H+ LY+ PEI D +YDRL REL LE++HP+L DSPT R+G Sbjct: 10 QRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGDSPTLRIGDD 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN--------------------- 104 + F+++RH ML+LDN +DE F+ RV L Sbjct: 70 RVEGFTRVRHRQAMLTLDNTYDEGELREFHVRVVKALSKENPPPPPPPPPSPTTTATKPT 129 Query: 105 ----------------------NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTG 142 + + + E K+DG+++S+ YE+G L A TRGDGT G Sbjct: 130 EQLDLFAPVPSPPPPPLPPATFDANIAYIVEPKIDGVSISLTYEHGKLTQAITRGDGTEG 189 Query: 143 EDITSNVRTIRAIPLKL-HGEN----IPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 +D+T+NV+TI +P L H +PA +E+RGE+FL + F +IN+ G +A Sbjct: 190 DDVTANVKTIHGLPHTLCHAPGTTTPLPALIEIRGEIFLREEEFRRINQQQEEAGDAPYA 249 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP------------DTHLGRLLQ 245 NPRN AAG+L+QLDP + A R L YG+G E P D+ Q Sbjct: 250 NPRNLAAGTLKQLDPTLVASRRLEIVLYGLGACEPAVPPPPPSAPTDALGFDSQTTYQRQ 309 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF--- 302 WGLP +++ + V +++ R T + DG V+K++ AQQ+ LG+ Sbjct: 310 LIAWGLPTVEKIWSVRGIDAVWTAIQELDRLRRTFAYATDGAVVKLDLFAQQKILGYRGA 369 Query: 303 --VARA-------PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 RA PRWA AFKFP T +R + QVGRTG +TPVA L+PV +AG V Sbjct: 370 DATGRAQEARKLSPRWACAFKFPPDRAKTRLRAITIQVGRTGVLTPVAELDPVLLAGSTV 429 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 ATLHNADEI R +RI D V+I +AG++IP V+NV++ +RP D+ FP +CP C + Sbjct: 430 RRATLHNADEIARKDVRINDTVLIEKAGEIIPAVINVIVEKRPPDSIPYAFPQNCPACNT 489 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 R+EGE RC G R+ + HFVS+ +D++G+G +I++ L++ + T D Sbjct: 490 PAVRIEGEVAWRCLNPHCPGKMRRR-IAHFVSKACLDIEGLGREIVELLLDHNLIKTIPD 548 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 LF+LT +L L++ G + N++NA+ + R ++ LGI +VG A A LA F Sbjct: 549 LFRLTREQLLPLKKSGETWSGNLINAIAARRTADLWRVIHGLGIPQVGAAAAKNLARAFR 608 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+AL AA++ +L+++PD G A V ++FA+ N+ +I++L G+ AP A Sbjct: 609 SLDALAAATLPDLERLPDFGATTAQAVRDWFADPHNQELIADLQRAGL---APTPPAAAA 665 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + P AGKT+VLTG+L ++R+ A ++ G K++ SVSKKT V+AG AGSKL KAQ Sbjct: 666 TNHPLAGKTIVLTGTLPTLTREQATEKIEAAGGKISTSVSKKTHYVLAGAEAGSKLEKAQ 725 Query: 654 ELGIEVIDEAEMLRLL 669 +LG+ ++DEA L+LL Sbjct: 726 KLGVPILDEAAFLQLL 741 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 272/594 (45%), Positives = 346/594 (58%), Gaps = 68/594 (11%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L + H+ YH DAP I DAEYD L R L +E + PEL + + VGA F Sbjct: 26 LSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGAASVSVGAKASDKF 85 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYENG 128 +++RH VPMLSL N F EE F +RV+ L +E + + E K+DGL++S+ YE G Sbjct: 86 AKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPKIDGLSLSLRYEGG 145 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 LV+AATRGDG GED+T+NVRTIR IP +L G+++P EVRGEV+L A F IN Sbjct: 146 RLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVYLSHADFAAINARQ 205 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFK 247 G +FANPRNAAAGSLRQLDP ITA RPL FF Y G E P +T G + F+ Sbjct: 206 EEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAG--EMSSWPAETQSGLIGAFR 263 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAP 307 ++GLPV+ R C S E+LA Y +E +R LG+DIDGVV KV+ A Q +LGFVARAP Sbjct: 264 RFGLPVNPRTKRCTSVAEMLAHYRAIETERAELGYDIDGVVYKVDEFALQRRLGFVARAP 323 Query: 308 RWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE-- 365 RWA+A KFPAQ +T + +E VGRTG++ P+ARL+PV V GV+VSNATLHN D I Sbjct: 324 RWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGGVVVSNATLHNEDYIRGI 383 Query: 366 -------RLGL--------------------RIGDKVVIRRAGDVIPQVVNVVLSERPED 398 R G+ R+GD VV+ RAGDVIP+V +VVL RP D Sbjct: 384 DADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAGDVIPKVADVVLERRPAD 443 Query: 399 TREVVFPTHCPVCGSDVERVEG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVD 452 FP CP CGS R ++V RCTGGLIC AQ +E L+HFVSR A D++ Sbjct: 444 AVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQGQERLRHFVSRNAFDIE 503 Query: 453 GMGDKIIDQLVEKEYVHTPADLFK----------------------LTAGKLTGLERMGP 490 G G+ I L E V PADLF+ L AGK ++ P Sbjct: 504 GFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSAERALAAGKTPEAKKAKP 563 Query: 491 KSAQ------NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 K+ + N++ A+E + RF++ALGI +VGEATA LA +F + AL Sbjct: 564 KANEEDKAIHNLLAAVEARRTIPLNRFIFALGIEQVGEATAKALAKHFPDMPAL 617 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 29/205 (14%) Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L L R+GP + + ++ A E A ET L + + A L A +G + L Sbjct: 635 ELASLPRVGPTTRERLLAAAE-AGETDL---LADGAVTRLTSAQKEALLAAYGDRDGLRN 690 Query: 541 ASIEELQKVP-----------DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 A L++ P ++G V + + FF+E N + LL E + Sbjct: 691 AVERALRQKPGDAYRHLADDSEIGAVTTASLIEFFSEAHNVEAVEALLRE---------V 741 Query: 590 NAEEIDSP-----FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 E +P F+G+TVV TGSL +M+R +AKA LGAKV+GSVS KTDLV+AG Sbjct: 742 RTERAGTPAAAAVFSGQTVVFTGSLERMTRSEAKATAERLGAKVSGSVSAKTDLVVAGPG 801 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLL 669 AGSKL A++ G+ VI EAE L ++ Sbjct: 802 AGSKLKDAEKHGVRVISEAEWLAMV 826 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust. Identities = 269/683 (39%), Positives = 394/683 (57%), Gaps = 22/683 (3%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S E ++ +LR T+ H Y++ +AP I DA+YD LM+ L LE +HPE P SP+ RV Sbjct: 5 STELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSPSLRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G AF Q+ HE PMLSL N ++ + KR D L + V W E+K DG ++S Sbjct: 65 GRDRNDAFVQVAHEQPMLSLSNTYNYDEIAEICKRT-DTLLATDDVPWVAEMKYDGSSIS 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-----ENIPARLEVRGEVFLP 177 ++YE GVL A TRGDGT G+D+T NVRTI+++PL+LH + R+EVRGEV LP Sbjct: 124 LIYEEGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRGEVLLP 183 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GELP 236 FE++N + FANPRNAAAG+L+ L+ RI A+R L CY + L+ LP Sbjct: 184 FKEFERLNGERTAESEAPFANPRNAAAGTLKTLNSRIVAQRRLLCICYYLYALDDETRLP 243 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEE---DRPTLGFDIDGVVIKVNS 293 D++ R+ ++ G D + ++ A YH ++E R L + DG+V+KV+S Sbjct: 244 DSYYERMKLLEEMGF---DTGVAPFKSSDLSALYHYIDEWDVQRGDLPYATDGIVLKVDS 300 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 L QQ LG A++PRWA A+K+ + + V++QVGR+G +TPVA +EPV ++G +V Sbjct: 301 LTQQRVLGNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVANVEPVLISGTVV 360 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 ATLHN + I+ L L D V I + G++IP++ V S R + V P CP CG+ Sbjct: 361 RRATLHNEEFIKSLDLHYHDYVYIEKGGEIIPKITAVEPSLRRPEAEPVRLPERCPACGA 420 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 +++++G C C Q ++H+ +RRA D++ +G + ID L ++ + D Sbjct: 421 PLQQIDGSVGYYCVNSYACPPQIMGRIEHYCTRRAADIN-VGPETIDALFDRHLIENIDD 479 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L+KLTA L L KS N++ ++E++K FAR LY +GIR VGE TA LA +F Sbjct: 480 LYKLTASDLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFVGEGTAKTLARHFQ 539 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +++ L A+ ELQ +PDVG +A V FF+ E N+ +I+EL GV E Sbjct: 540 SIDRLAQATAYELQALPDVGPKIAEQVVYFFSLERNQQLIAELQRCGVRLEE---CAEEA 596 Query: 594 IDSP----FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SK 648 D P G+ +V++GS +Q SRD+ K + + G GS+S +T V+ G G SK Sbjct: 597 TDMPQSNRLEGERIVISGSFTQHSRDEYKQLIEQHGGTNVGSISSRTTFVLMGSDMGPSK 656 Query: 649 LAKAQELGIEVIDEAEMLRLLGS 671 AKA++LGI ++ E E L L S Sbjct: 657 RAKAEQLGIPLVTEEEFLARLNS 679 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust. Identities = 281/667 (42%), Positives = 384/667 (57%), Gaps = 20/667 (2%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 +R H++ Y+V+DAP I D E+D L+REL+ LE HP L TPDSPTQ+VG F+ + Sbjct: 57 VRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQQVGGTFSTEFTAVD 116 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H MLSLDN FDE+ A+ +RV + + + + CELK+DGLA+++ YE G LV A Sbjct: 117 HLERMLSLDNAFDEDGLRAWFERVGKEVGDAAR--YLCELKVDGLAINLRYERGRLVRAL 174 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAGFEKINEDARRT 191 TRGDG TGED+T N+RT+R +P L G + +P +EVRGEV+ F ++N Sbjct: 175 TRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVEDFLELNAKLVEA 234 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL 251 G FANPRN AAGSLRQ DP++TA R L C+G+G G EL + + WGL Sbjct: 235 GLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFEL-ERQSDAYAALRAWGL 293 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 P S+ + + +EV A E R +IDG+V+KV+ + Q +LG +RAPRWA+ Sbjct: 294 PTSEHTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRRLGSTSRAPRWAI 353 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 AFK+P +E T + D+ QVGRTG +TP A +EPV VAG V+ ATLHNA E++R G+ I Sbjct: 354 AFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLHNASEVKRKGVLI 413 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVARCTGGL 430 GD++VIR+AGDVIP+V+ V+ RP D RE V P CP CG + + EG+ RC Sbjct: 414 GDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMKEGDVDIRCPNAE 473 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C AQ +E L + SR A+DV+ +G + L E ADLF LTA L ++ Sbjct: 474 GCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDLTAEDLLRVDLFRN 533 Query: 491 KSAQNVVNA------LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 + V N LE AK R L AL IR VG A LA FG ++A+ A Sbjct: 534 QDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVEFGGVQAILDAEEA 593 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE--IDSPFAGKT 602 +L VG +A+ V + + V+ A GV +++ + I G + Sbjct: 594 DLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVR-----MVDERDTTIRRDLEGLS 648 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 +V+TG+L+ SRD+AK ++ G K GSVSKKT VI G+ GSK KA +L + V+DE Sbjct: 649 IVVTGTLADFSRDEAKDSILVRGGKAVGSVSKKTAFVIVGDNPGSKADKAAQLKVPVLDE 708 Query: 663 AEMLRLL 669 A LL Sbjct: 709 AGFRVLL 715 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 256/669 (38%), Positives = 390/669 (58%), Gaps = 28/669 (4%) Query: 16 RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRH 75 RH+++ Y+ + P + D E+D L +++ +LE K+ L + SPT+ +G P F +I+H Sbjct: 19 RHNKH-YYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIGFKPSKNFQKIKH 77 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 133 +VPMLSL N F+EE F K++ + LK+ + + E K+DG++ S++Y +G L Sbjct: 78 KVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKIDGISASLIYIDGKLTKG 137 Query: 134 ATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGG 193 +RGDG GEDIT N++TI+ IPL++ N P +++RGEVF+ F+KI + Sbjct: 138 LSRGDGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFIENNDFKKIKDK------ 191 Query: 194 KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPV 253 FANPRNAA+GSLRQ + ITAK PL F Y G + + + L K WG Sbjct: 192 --FANPRNAASGSLRQKNSLITAKIPLKFIAYTYGYEKKMNIKN-QTSFLENLKLWGFKT 248 Query: 254 SDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAF 313 + + ++ + ++EE R L FDIDG+V KVN Q++LGF A APRWA+A Sbjct: 249 NPFNKKIIGVKNLMLNHKELEEKRKELAFDIDGIVYKVNDFDLQKRLGFAANAPRWAIAH 308 Query: 314 KFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGD 373 KF A ++ + ++E Q+GRTGA+TPVA+++PV++ GV+VSNATLHN DEI R +R+GD Sbjct: 309 KFSANSSISEIMNIEIQIGRTGALTPVAKIKPVNIGGVIVSNATLHNEDEIVRKDIRVGD 368 Query: 374 KVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE------AVARCT 427 V + RAGDVIP VV+V L +R +++++ +FP CP CGS + E AV RC Sbjct: 369 TVTVERAGDVIPHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTIKDYNETTKRQDAVRRCA 428 Query: 428 G-GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 G C E +KHFVS+ A ++DG G KI++ + V P D+FKL K+ LE Sbjct: 429 SEGFECEKIAIERIKHFVSKDAFNIDGFGKKIVENFWNLKLVRLPQDIFKLNYNKIEELE 488 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS---- 542 G S N+ ++E+ K + RF+Y+LGIR +G+ A +A + T S Sbjct: 489 GWGKLSVANLRFSIEEKKNISLERFIYSLGIRHIGQENAKLIARHLKTASNFFRLSGEKN 548 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 IE L + +GI + FF ++N V+SE L + + I+IN + KT Sbjct: 549 IESLSNIDGIGITQIQSIKKFFLNKTNLKVLSE-LEKNLLIKDVILINNNGL---LKNKT 604 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVID 661 +LTG L+ +SR +AK+ + + K+ +V+KK D +IAG+ K+ A+E I++I+ Sbjct: 605 FMLTGKLNGISRAEAKSLIEQNSGKIISNVNKKLDYLIAGDKPTLKKINTAKEWNIKIIN 664 Query: 662 EAEMLRLLG 670 + E L++L Sbjct: 665 QTEWLKMLN 673 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 252/672 (37%), Positives = 394/672 (58%), Gaps = 18/672 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I++++ ELR + +H Y+ D PEI D EYD+L ELR LE HPE SPTQ+VG Sbjct: 3 IKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKVG 62 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 +++H++P++SL +VF +E +F +++ + + + E K+DGL V + Sbjct: 63 GTVKRELRKVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPK---FVVEKKIDGLTVVL 119 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL---EVRGEVFLPQAG 180 Y NG L A TRGDG+ GE + N+ +++IP ++IP++L E+RGE+++ Sbjct: 120 RYYNGELKEAITRGDGSIGESVFENILQVKSIP-----KHIPSKLNYLEIRGEIYMTNEN 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F K+NE GGK+F NPRN AAG++RQLD I R L F + + + EG + +TH Sbjct: 175 FIKVNEKQEEIGGKIFKNPRNLAAGTIRQLDTSIVKDRNLDIFIFNLEISEGKKF-ETHS 233 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L G VS +CE+A+EV +EE R LG+ IDG V+KV++L + L Sbjct: 234 ETLEWLSNQGFDVSPNFKICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISL 293 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ P+W VAFK+P +++ T + D+ QV RTG + P+A L PV +A +S ATLHN Sbjct: 294 GMTSKVPKWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHN 353 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ +RIGD V+I++AGD+IP+++ + +RP+ ++ + P CPVC S R Sbjct: 354 QDFIDSKDIRIGDTVIIQKAGDIIPEIIRSIPEKRPDWAKKYIIPDVCPVCNSKTIREPD 413 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 RC+ C AQ + +FVS+ AM++ G G ++ L++ Y+ +D++ L Sbjct: 414 GVDTRCSNP-DCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKISDIYILKNY 472 Query: 481 KLTGLER--MGP-KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K +E+ +G KS N++NA+E +K+ R + LGIR VG+ +A LA F +++ Sbjct: 473 KDALIEKGIIGKEKSVNNLLNAIELSKDNDIDRLITGLGIRNVGKQSAKILAGNFKSMDE 532 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L A+ E+L ++ D G + FF + +I +L GV+ + + ++ID+ Sbjct: 533 LAGAAYEQLIELEDFGPTTVPDILEFFNSNAYIELIKKLKEAGVNTISKTL--QKKIDNR 590 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F GKT V+TG+L M RD+A + G KV+GSVSK+T V+AGE AGSKL KAQ+LGI Sbjct: 591 FLGKTFVITGTLPTMKRDEAAEIIQSFGGKVSGSVSKRTSFVLAGEEAGSKLTKAQQLGI 650 Query: 658 EVIDEAEMLRLL 669 +I E ++ ++ Sbjct: 651 SIITEEDLKDMI 662 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 273/669 (40%), Positives = 389/669 (58%), Gaps = 16/669 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +L +R H++ Y+V+D+P I D E+D L EL+ LE+ HP L PDSPTQ VG Sbjct: 43 VRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F+ + H MLSLDN FD + A+ +RV+ + ++ + CELK+DGLA+++ Sbjct: 103 GTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSS--AHYLCELKIDGLAINL 160 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAG 180 LY +G L A TRGDG TGED+T NVRT+ +P +L G + +PA +E+RGEVF Sbjct: 161 LYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVDE 220 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N G FANPRN+AAGSLRQ DPR+T RPL C+G+G EG E P Sbjct: 221 FAQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFE-PKQQS 279 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + WGL VS + + +EVL + R + +IDGVV+KV+ ++ Q +L Sbjct: 280 ESYAALRAWGLRVSPHTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRRL 339 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +RAPRW++A+K+P ++ T + D++ VGRTG +TP A +EPV VAG V+ ATLHN Sbjct: 340 GATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLHN 399 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV-ERVE 419 AD++ G+ IGD+VVIR+AGDVIP+V+ V+ R RE V PT CP CG+ + + E Sbjct: 400 ADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQKE 459 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 G+ RC C QR+E L R+A D++ +G + + L+ V DLF L Sbjct: 460 GDVDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLNE 519 Query: 480 GKL--TGLERMGPKS----AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L T L R S ++ LE AK+ R L AL IR VG A LA FG Sbjct: 520 EALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREFG 579 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+ ++ AS EEL VG +A+ V +F + +R ++ + GV E Sbjct: 580 SLDRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRMADE---RDES 636 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I+ G ++V+TGSL SRD+AK ++ G + AGSVSKKT V+ GE+ GSK KA Sbjct: 637 IERHLTGLSIVVTGSLEGFSRDEAKELIMARGGRAAGSVSKKTAFVVVGESPGSKYDKAV 696 Query: 654 ELGIEVIDE 662 ++ + V+DE Sbjct: 697 QMKVPVLDE 705 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust. Identities = 295/677 (43%), Positives = 392/677 (57%), Gaps = 37/677 (5%) Query: 20 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPM 79 + Y+V+D+P I DA++DR MR L LE + PEL TPDSPTQ VG A F+ H M Sbjct: 79 WRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQTVGGAVSTDFTSHPHLRRM 138 Query: 80 LSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDG 139 SLDN F E A+ R+ R E CELK+DGLA+++LYE G LV A TRGDG Sbjct: 139 ESLDNAFSVEEVEAWYARL--RRDGVEDPALLCELKVDGLAINLLYEEGRLVRALTRGDG 196 Query: 140 TTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAGFEKINEDARRTGGKVF 196 TTGED+TSNV+TI ++P +L G + +PA +EVRGEVFLP FE++NE G F Sbjct: 197 TTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPVEAFERLNESLLEAGKAPF 256 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDR 256 ANPRN+AAGSLRQ DPRITA R L C+G+G G E P WGLP SD+ Sbjct: 257 ANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFE-PQAQSHAYDALAAWGLPTSDQ 315 Query: 257 VTLCESAEEVLAFYHKVEEDRPTL-GFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 V + + + V + R T+ ++IDGVV+KV+ +A Q +LG +RAPRWA+AFK+ Sbjct: 316 VRVVSTLKGVEGYIENAGARRHTIVPYEIDGVVVKVDDVALQRRLGSTSRAPRWAIAFKY 375 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR----- 370 P +E + ++ VGRTG +TP A +EP VAG V NATLHN E+ER +R Sbjct: 376 PPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENATLHNFYEVERKDVRPGGPG 435 Query: 371 -IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD-VERVEGEAVARCTG 428 GD V++R+AGDVIP+++ VL+ RPE + V PT CP CG+ VE+ EG+ RC Sbjct: 436 DPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSCGTPLVEQKEGDKDRRCPN 495 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL--TGLE 486 C Q +E + SR A D++G+G + L++ E + D+F L A L L Sbjct: 496 HEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIANEGDVFDLDAAALLRAPLF 555 Query: 487 RMGPK----------SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 PK + Q +++ L+KAK+ R L AL IR VG LA FG++ Sbjct: 556 TRAPKKDEDGPQLSANGQRLLDNLDKAKQVPLWRVLVALSIRHVGPKAGRALATEFGSMA 615 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 A+ AA+ E+L VG +A V +F E + ++ + W V A+E D Sbjct: 616 AIRAATEEQLAAAEGVGPTIAEAVIEWFKEPWHVEIVDK-------WERAGVTMADERDE 668 Query: 597 P----FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 AG TVV+TGSL SRD AK ++ G K AGSVSKKTD V+ GE AGSK KA Sbjct: 669 STPRTLAGLTVVVTGSLVDFSRDSAKEAILSRGGKAAGSVSKKTDYVVVGENAGSKADKA 728 Query: 653 QELGIEVIDEAEMLRLL 669 ++LG+ V+DEA LL Sbjct: 729 EQLGVPVLDEAGFKTLL 745 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 263/660 (39%), Positives = 396/660 (60%), Gaps = 25/660 (3%) Query: 14 TLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQI 73 TL+ Y Y+V+D P + D EYD+L E+ E E KHP+ I P SPTQRVG L F + Sbjct: 14 TLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQRVGDVVLEGFEKA 73 Query: 74 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 133 +H M S+++VF+E+ FL + RV+ R+ +E ++ E K DG +++++YENG L+ A Sbjct: 74 KHLSRMWSMEDVFNEKDFLDWVGRVK-RILGHENFSFYIEPKFDGASLNLIYENGKLIRA 132 Query: 134 ATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGG 193 TRGDG GED+T N +TI +IPL++ +++ +E+RGEV + + F+K+NE+ + G Sbjct: 133 ETRGDGEIGEDVTLNAKTINSIPLEIKEKSL---IEIRGEVVIKKDDFDKLNEERLKNGE 189 Query: 194 KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF-KKWGLP 252 FANPRNAAAGSLRQLDP+ITAKRPL F+ +GVGV L L+ + G Sbjct: 190 PTFANPRNAAAGSLRQLDPKITAKRPLIFYPWGVGV---NSLNYERYSELMDYIYSLGFK 246 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 + +C+ V Y + + R + +DG+V+K++ + + LG+ + PRW VA Sbjct: 247 EPPKRGVCKDIPCVEKKYDEFVKLRDSFEVMLDGMVVKIDEIKYHDILGYTQKYPRWMVA 306 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 +KFPA E+ T + DV QVGRTG +TPVA L+PV + GV+V ATLHN DEIER+ +RIG Sbjct: 307 YKFPAIEKETIIEDVIVQVGRTGVLTPVAVLKPVEIGGVIVERATLHNFDEIERMDIRIG 366 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 D V++ R+GDVIP++ V+ +R D + + PTHCPVCG++V ++ A+ +C L C Sbjct: 367 DHVIVIRSGDVIPKITKVLTWKRKGDEKPIPRPTHCPVCGAEV--LDEGALIKCQ-NLSC 423 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS 492 A+ ++ +F S+ +D++G+G+ + L E V DLF+L L L K Sbjct: 424 PARVVNTIIYFASKNCLDIEGLGESVAKLLYEHGLVKDVTDLFELKVEDLEKLPLFARKK 483 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT--LEALEAASIEELQKVP 550 A+N+VNA++ RF+ ALGI +GE + + FG + E P Sbjct: 484 AENLVNAIKSKVGVECWRFVNALGIEHIGEVASKKICEKFGVEFYKHAPEEFEEIEGFGP 543 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID-SPFAGKTVVLTGSL 609 ++ +A ++ N+ I +L + P +E+ +PF GKTVVLTG++ Sbjct: 544 EMVKSIAEYIR------VNKEKIEKL----IEILKPKNPEKKEVQKTPFTGKTVVLTGTM 593 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 S+ R + K L ++GAKV+ SVSKKTD VI GE AGSK KA++LG+ ++ E +M ++L Sbjct: 594 SK-PRSEIKKMLEDMGAKVSSSVSKKTDFVIYGEDAGSKYDKAKKLGVNLLSEDDMWKML 652 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 279/660 (42%), Positives = 386/660 (58%), Gaps = 14/660 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES ++ LR+ ++ Y+V D P + D E+D L+ ELR LE HPEL +PDSPT+R Sbjct: 3 ESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTER 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P ++F+ +RH PMLSLDNVFD + A+ +R + L ++ + + ELK+DGLA+ Sbjct: 63 VGAPPGSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFF--ELKIDGLAL 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y +G L AATRGDG GED+T+N + AIP +L G P +EVRGE+FLP++ F Sbjct: 121 SLTYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGPGLVEVRGELFLPRSAF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE R FANPRNAAAGSLRQ DP +T R L+FF Y LE G D H Sbjct: 181 RALNERVERP----FANPRNAAAGSLRQKDPALTRDRGLSFFAYQ---LEEGPSFDYHHE 233 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G V T +E+ + E R L +DIDG VIKV+ L + +LG Sbjct: 234 ALQWLGEVGFQVEAHATPV-GLDELADKLAWLAEARDGLDYDIDGAVIKVDRLEDRVRLG 292 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 APRW +A+KFPA+E+ T + +E VG++G +TP A L+PV V G VS ATLHNA Sbjct: 293 TTTHAPRWMIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNA 352 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+I RL +R+GD V++RRAG+VIP+VV VL RP+D VFPT CPVC + + R GE Sbjct: 353 DQIARLDVRVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGE 412 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C Q + L HF SR AMD+DG+G++ QLVE V P DL++LT Sbjct: 413 VDWRCPNRR-CPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDD 471 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L + +S + + +E ++ R ++AL I VG+ +A G+L L Sbjct: 472 LARLPGVRHRSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTV 531 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + +EL +V +G VVA+ V F + R ++ +L GV A P G Sbjct: 532 TEDELCRVEGIGPVVAASVVAFRDSDLGREILDKLERAGVGASAD---RPRAAGGPLEGL 588 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 + VLTG++ + R + A + E G +V SVS++T V+AG + GSKL +A+ GI VID Sbjct: 589 SFVLTGTVPGIGRAELAALIEEHGGQVRTSVSQRTSYVVAGASPGSKLDEARARGIPVID 648 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 255/681 (37%), Positives = 389/681 (57%), Gaps = 38/681 (5%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 L+ ++ Y+ + P + DA+YD L ++ K P L + +++VG P A FS++ Sbjct: 30 LQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDHSKKVGFTPSAQFSKVV 89 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H PMLSL N F E F ++Q+ LK + CE K+DGL+ + YE GVL A+ Sbjct: 90 HLKPMLSLANGFCVEDISNFITKIQNFLKIDHCPKIVCEYKIDGLSFNARYEYGVLTLAS 149 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR---LEVRGEVFLPQAGFEKINEDARRT 191 TRGDG GE+IT N++TI++ P + +P EVRGE+++ F +N ++ Sbjct: 150 TRGDGQIGENITENLKTIQSFP-----QTLPITDKVFEVRGEIYITNNDFRVLNIQQQKL 204 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL 251 G +F+NPRNAAAGS+RQLDP ITA+RPL +F Y +G + T L + + Sbjct: 205 GKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFASTQFELLQKLSQLKF 264 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 V+ L ++ ++ FY+ V +R L F+IDGVV KVN A QE+LG + +PR+A+ Sbjct: 265 SVNTDYILSDNLHSMIEFYNNVATERNNLAFEIDGVVYKVNDFALQERLGATSTSPRFAI 324 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A+KFPA T + ++ QVG+TGA+TPVA L P+++AGV +S ATLHN EIE +RI Sbjct: 325 AYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVTISRATLHNKQEIESKDIRI 384 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTRE-VVFPTHCPVCGSDVERVEGEAVARCTGGL 430 GD V + RAGDVIP++ V LS R + E +FPT CP C ++ EGE VARC L Sbjct: 385 GDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSCNQNLVVNEGETVARCGNSL 444 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK-------LTAGKLT 483 C AQ E + HFVS+ A+++DG+G + I L++ +Y+ D+F L + KL Sbjct: 445 ACQAQIYERICHFVSKDALNIDGLGKQRIQFLLDNKYIVNIVDIFLLEENNKFLYSNKLE 504 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 + G KS + + +AK +F+YAL I+ VG+ +A LA F T + S+ Sbjct: 505 DIAGWGIKSVNKLFQNINQAKNVILDKFIYALAIKHVGKYSAKLLAKEFKTAKNFINQSL 564 Query: 544 ----------EELQKVPDVGIVVASHVHNFFAEESNRNVISELL----AEGVHWPAPIVI 589 E+L+ + VG+ A + FF +N N+I++L+ + + ++ Sbjct: 565 KLANNATEIYEKLRNIEGVGVKTADQLKQFFMVSANVNLITKLVNILTIQDWQYHGDNLL 624 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 + +T+V TG+ + +SR + K + +LGAKV VS TDL++ G AG+KL Sbjct: 625 --------LSNQTIVFTGTFATVSRSEIKVQAEKLGAKVGTQVSNNTDLLVVGNKAGNKL 676 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KAQ+LGI++I+E E ++++ Sbjct: 677 QKAQQLGIKIINEEEWIKMVN 697 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust. Identities = 264/573 (46%), Positives = 347/573 (60%), Gaps = 33/573 (5%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++L L L H+ YH DAP I DAEYD L R ++E + P L+ +SP+ RVGAA Sbjct: 16 EELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNSPSMRVGAA 75 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSIL 124 FS + H VPMLSLDN F + F+ R++ L+ NE V + E K+DGL+ S+ Sbjct: 76 RAEQFSPVEHGVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKIDGLSASLR 135 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN-----IPARLEVRGEVFLPQA 179 YE GVLV ATRGDG GED+T+N+RTI IP +L G + P +E+RGEV++ Sbjct: 136 YEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIRGEVYVELE 195 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F N A G + +ANPRN AAGSLRQ+DP+I+A+RPL FF Y G+ G T Sbjct: 196 AFAAFNAAALEAGQRTYANPRNFAAGSLRQIDPKISAQRPLRFFAYAWGLTSEG-FAATQ 254 Query: 240 LGRLLQFKKWGL----PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 L + + WG P ++RV + A+ +L Y K E +RP L FDIDGVV KV+ L Sbjct: 255 WEALGKLRDWGFVTTAPPAERV---QDAQGLLDIYAKFEVERPKLAFDIDGVVYKVDDLE 311 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 QQ +LGFV+R+PRWA+A KFPAQ+ T + ++ QVGRTGAITPVARL+PV V GV V+N Sbjct: 312 QQRRLGFVSRSPRWAIARKFPAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGVSVTN 371 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHNADEI R +RIGD V+++RAGDVIPQ+V VL ERP FPTHCP C + Sbjct: 372 ATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLEERPAGAVPFEFPTHCP-CHLET 430 Query: 416 ERVEGEAVA-------RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 V A RC+G C QR E L+HFVSRRA D++G+G+K + E+ ++ Sbjct: 431 PLVRESTAAGAETVVRRCSGEFACPFQRIEHLRHFVSRRAFDIEGLGEKQLAAFFEEGWI 490 Query: 469 HTPADLFKLT--AGKLTGL-ER--MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 PAD+FKL KL L ER G S N+V +E + R +Y LG+R++GE Sbjct: 491 KEPADIFKLARDEAKLAELRERDGYGETSVANLVKGIEARRTIGLDRVIYGLGMRDIGET 550 Query: 524 TAAGLAAYF------GTLEALEAASIEELQKVP 550 T+ LA F G E L+AA+ ++P Sbjct: 551 TSTVLARNFASPKGKGGFEDLQAAAERAAGQLP 583 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 4/126 (3%) Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L + +G V A + FFAE NR ++ L+AE P + + D+ AGKT+V Sbjct: 670 QLAAIDGIGPVAAQSIARFFAEAHNREKVANLIAELDIQP----VAKPKTDTAVAGKTIV 725 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 TG+L +M+RD+AKA+ LGAKVA SVSKKTDLV+AG AGSKL A ELGI+V+ E E Sbjct: 726 FTGALEKMTRDEAKAQAEGLGAKVASSVSKKTDLVVAGPGAGSKLKTATELGIQVMTEDE 785 Query: 665 MLRLLG 670 L ++G Sbjct: 786 WLAMVG 791 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 273/679 (40%), Positives = 395/679 (58%), Gaps = 34/679 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +++ EL L + Y Y+V+D P I D EYD EL LE K E+ P SPTQ Sbjct: 1 MDNKLEKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILE-KKTEVTLPYSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFL-----------AFNKRVQDRLKNNEKVT 109 RVG L FS+ H+ + SLD + E + +N +D+L ++ Sbjct: 60 RVGDKILGEFSKYTHKGRLWSLDKAQNMEQLIEWHNRNLKVIEQYNSMSEDKLP---ELR 116 Query: 110 WCCELKLDGLAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL 168 + K DGL V+ Y ENG+L+ +ATRG G GEDIT+ ++TI+ +PLK+ + + Sbjct: 117 YIVTKKFDGLTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNSYV---I 173 Query: 169 EVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG 228 EV GE + + FE+ N+ A+ N RN AAG+LR LD + TA+R L+ F Y VG Sbjct: 174 EVHGEAIMTKTAFEEYNKAAQVP----LKNLRNGAAGALRNLDIKETARRNLSAFFYDVG 229 Query: 229 VLEGGELPDTHLGRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 EG E ++ F + GLP + C + EEV +E R L +DIDG Sbjct: 230 YNEGPEFKSYR--EMMNFIRNMGLPQDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGA 287 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 VI V+ + +E LG+ + P+WA+A+KF A+E T + DVE+ VGR+G +TP A LEPV Sbjct: 288 VIVVDDIKTREILGYTIKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVE 347 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 + GV V ATL+N D+I+R +++G KV++RR+ DVIP+++ VV E + E+ P Sbjct: 348 LGGVTVKRATLNNMDDIKRKNVKLGAKVLVRRSNDVIPEIMGVVEESLEE-SEEIQAPDR 406 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CP C S + V+ C L C Q +S+ HF SR AM++ G +K +QL EK Sbjct: 407 CPYCNSHL--VQNGVHYYCENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLD 464 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 + + ADL+K+ +L LE+ K +QN+++A++ +K A F+YALGI VG+ TA Sbjct: 465 IKSIADLYKIKKEELLTLEKFKDKKSQNLIDAIQNSKNCDLASFIYALGIPNVGKKTAND 524 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 L F TLE+++ +IE+L +VPDVG +VA +++FF +E + I ELL GV P Sbjct: 525 LVMKFKTLESIKNTTIEQLVEVPDVGEIVAKSIYDFFEDEKIISNIEELLNLGVK-P--- 580 Query: 588 VINAEEID-SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 E ID +PF KT+V+TGSL+ SR + K +L LGAKV+ SVSK TD V+ GE G Sbjct: 581 YYEEERIDENPFMDKTIVVTGSLNNYSRGEIKDKLQSLGAKVSSSVSKNTDYVLVGEKPG 640 Query: 647 SKLAKAQELGIEVIDEAEM 665 SK KA ELG++VI+E E Sbjct: 641 SKYEKAIELGVKVINEEEF 659 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 267/665 (40%), Positives = 383/665 (57%), Gaps = 18/665 (2%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q+ E L+ Y Y+V+D PE+PD YD+L RE+ E E HP+ I P SPTQR+GA Sbjct: 6 QEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIGAE 65 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P F +I+H M S+++VF++ + +RV + + + E K DG +++++Y Sbjct: 66 PAKEFKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKD-LQFYIEPKFDGASLNLIY 124 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG+L SAATRGDG GED+T+N +TI +IPL G + +E+RGEV + + FEK+N Sbjct: 125 ENGLLKSAATRGDGEVGEDVTANAKTIPSIPL---GIDYKGLIEIRGEVVIRKDDFEKLN 181 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + G FANPRNAAAGSLRQLDP++TA+R L F+ + +G L + + Sbjct: 182 HERALKGESTFANPRNAAAGSLRQLDPKVTAQRKLYFYPWDIGY---NTLNFKYQHEKMD 238 Query: 246 F-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 F + G + +CE+ EE+ Y + ++R L +DG+V+KV+ +A E LG+ Sbjct: 239 FVYQQGFIKPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKVDEIALHEILGYTV 298 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PRW VA+KFPA E+MT + D+ QVGRTG ITPVA LEPV + GV+V ATLHN EI Sbjct: 299 KYPRWMVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHNYAEI 358 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ER +RIGD V++ R+GDVIP+V V+ R ++V P CPVCG V ++ + Sbjct: 359 ERKDIRIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPV--LDEGILI 416 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ S+ +F S++ +D+ G+G+ + L EK V DLFKL L Sbjct: 417 KCQ-NLSCPARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKEDLLR 475 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L K AQN+++A + K RF+ ALGI +GE + L FG L+ +A E Sbjct: 476 LPGFAEKKAQNLIDATQSVKGVECWRFVNALGIEHIGEVASKKLCEKFG-LDWYKAPK-E 533 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L ++ G + + F E N+ I +L+ + P E +SP A KTVV Sbjct: 534 KLYEIEGFGPEMVRSIEEFV--EVNKEKIEKLIE--LLQPTEPKKEEEVENSPLAHKTVV 589 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG + ++ R K L GA V SVS TD V GE GSK KAQ+LG+ ++ E + Sbjct: 590 LTGEM-KLPRSKIKELLERAGAHVTNSVSHHTDYVFYGENPGSKFQKAQQLGVPLLPEEK 648 Query: 665 MLRLL 669 M LL Sbjct: 649 MWELL 653 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 280/699 (40%), Positives = 402/699 (57%), Gaps = 51/699 (7%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHP-ELITPDSPT 59 +E + ++ T+LR + +H+ LYH PEI DAEYD+L ++L E+E + P +T D Sbjct: 4 LEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDG-- 61 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VGAAP FS+I+H PMLSL+N +DE+ F R++ R E++ CE K+DGL Sbjct: 62 --VGAAPDEKFSKIKHREPMLSLENAYDEQGVERFLSRIK-RFLIEEEIEVFCEPKIDGL 118 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 + S +YE+G V AATRGDG GED+T NV TI+ P L +++ RLEVRGE+++ + Sbjct: 119 SFSAVYEDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFL--QDVQDRLEVRGEIYINNS 176 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F K+N+D FANPRNAAAGSL+QLD ITA RPL +F Y + + G E + Sbjct: 177 DFLKLNKDNE------FANPRNAAAGSLKQLDVSITANRPLKYFAYSL--IGGKEKSQSE 228 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + L + + G V++ +L + +L FY+KV R +L +DIDG+V KVN L Q + Sbjct: 229 V--LNRLESLGFCVNEHRSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSR 286 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +APR A+A+KF A T + + QVGRTG +TPVA L PV++ GVLVS A LH Sbjct: 287 LGSTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLH 346 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+R +R GD V I+RAGDVIPQ+V V R D VFP CP CG V+ E Sbjct: 347 NQDEIKRKDVREGDIVTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQ-AE 405 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF---- 475 G A+ RC+ L C AQ L HFVS+ A D+ G+G+K I + + D+F Sbjct: 406 GAAI-RCSEELTCKAQIIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEE 464 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF--- 532 +L L G +S N++NA++ + T RF+++LGIR +G+ A LA Y+ Sbjct: 465 RLNEFSLKEQPDWGERSIANLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSY 524 Query: 533 -------------------GTLEALEAASI-EELQKVPDVGIVVASHVHNFFAEESNRNV 572 G +E A S +EL + +G VA + +FF++E N + Sbjct: 525 NNWYNSMIKLLSNDAEVGVGGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKM 584 Query: 573 ISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 + +L + + +N+ +S K +V TG L MSR +AK R LGAKV+ ++ Sbjct: 585 LKDL----TDYLQILSVNSNSSNSVLNNKVIVFTGKLLTMSRGEAKVRAKALGAKVSSNL 640 Query: 633 SKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 S K D ++AGE G+K KA ELG+ +++E + R++ S Sbjct: 641 SAKIDYLVAGEKPGNKYKKAVELGVGILNEDQWYRMINS 679 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust. Identities = 254/658 (38%), Positives = 386/658 (58%), Gaps = 21/658 (3%) Query: 13 TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQ 72 T L HH Y+ MD P DAEYDRL EL ++E HPE SP+ RVG L F + Sbjct: 16 TMLNHH---YYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSNRVGGEVLDKFEK 72 Query: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 132 H +P+ SL+ +++ K V+D + T+ E K+DGLA + Y G Sbjct: 73 KEHTMPLYSLEK---SQTYDGVRKFVEDVKREFPNATFTIEQKMDGLANVLRYSGGSFSE 129 Query: 133 AATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTG 192 TRG G GE ++ ++TIR+IPL + + + +E RGEVF+P +GFE N G Sbjct: 130 GRTRGTGKIGEIVSEQIKTIRSIPLNIRFQGV---IEPRGEVFMPISGFEAYNASLPE-G 185 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLP 252 NPRN AAG+LR LDPRI A RPL F Y + EG +T + ++ G Sbjct: 186 EAPLKNPRNGAAGALRNLDPRIAASRPLDAFWYDIAYSEGITF-ETQAEMMTFLQEQGFK 244 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 ++ + +S + ++ +++E RPTL +DIDG+VIKVN L +E+LG+ ++ P+WA+A Sbjct: 245 INPYFYVTDSIDVIIEKLEEMKEVRPTLNWDIDGMVIKVNELHIREELGYTSKFPKWAIA 304 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 +KF A E+ T + V ++VGRTG +TP+A LEPV + G V+ ATL+N D+I R G+++G Sbjct: 305 YKFEAVEETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNNYDDILRKGVKVG 364 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 +V +RR+ DVIP+++ +V E E T E+V PTHCP C + + V+ A RC C Sbjct: 365 AEVFVRRSNDVIPEIMGIV--EGSEGT-EIVPPTHCPECETVL--VQDGAHLRCMNIDSC 419 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV-HTPADLFKLTAGKLTGLERMGPK 491 AQ HF SR AM++D +K +QL E + ++ DL++L +L L+R G + Sbjct: 420 SAQSVGKFTHFASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDRNELLKLDRFGER 479 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 A ++ A+E++K T F+YALG+R G+ TA L Y+ ++ + AS+E+L ++ D Sbjct: 480 KADRLLAAIEESKSRTLEAFIYALGMRHSGKGTAERLLRYYNNIDDIANASVEDLMRIED 539 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G VA + ++F E N +I EL A G+ +++ + G T V+TG +S+ Sbjct: 540 IGSAVAQSIFDYFHNERNLQMIEELKALGLTLTHVAAVSS---GNQLEGNTFVITGKVSR 596 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 R + +A + E G K +GS+SK T+ ++AGEAAGSKLAKAQ LG+ VI E ++ +++ Sbjct: 597 -PRKEIEAFIKEHGGKASGSISKNTNYLVAGEAAGSKLAKAQSLGVTVITEEQLYKMV 653 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 238/678 (35%), Positives = 389/678 (57%), Gaps = 28/678 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I+Q++ L L Y Y+ + P++ D +YD L++EL LE +P+ P SPT + Sbjct: 5 DPIKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYPQFKLPYSPTLK 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G FS I+H+ PM+SL NVF+ E AF R+ ++ + ELK+DG+A+ Sbjct: 65 IGGFVEKKFSTIKHKTPMMSLANVFNIEELKAFYDRIVKKIPT---FSLLTELKIDGVAI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y+ G+LV A TRG+G GED+T N +TI+ IPL+L+ + LEVRGE++L F Sbjct: 122 SLKYQKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNED---LDLEVRGEIYLSHPDF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+N ++ +F+NPRNAA+G+LRQL+ + AKR L+ F YG+ D +L Sbjct: 179 EKLNAQRKQENKPLFSNPRNAASGTLRQLNSAVVAKRNLSIFVYGIA--------DPYLT 230 Query: 242 R------LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 + L+ G + + E +L+ K + + L +D DG+VIK+N L Sbjct: 231 KPTQKETLVFLTALGFATNPHHYFVSNFENLLSVIEKYKSIKEQLTYDTDGIVIKINELV 290 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 +G A+APRWA A+KF + ++++ FQVGRTG ITPV + PV V G LVS Sbjct: 291 FHSLIGATAKAPRWATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMVDGSLVSK 350 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 LHN D I + +RI D V++ +AG VIP+++ V+ S+R + + + CP C + + Sbjct: 351 VFLHNYDYICKKDIRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKCPSCKTIL 410 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 E+ G C C Q+ + L HFVS+ AMD++ +G++ I +K + P+DL+ Sbjct: 411 EKQPGGIDYFCLNPN-CREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLITKPSDLY 469 Query: 476 KLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L + L + G K N+++A+E +K+ F L+ALGI+ +G+ + LA YF Sbjct: 470 LLKNHQHILQEISGFGAKKITNILDAIEASKQKGFEDVLFALGIKHIGKKVSQVLAKYFQ 529 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 T+E L+ ++ + + ++ ++GI +A + +F+ N +++L GV + + N+++ Sbjct: 530 TIENLQQSTSDTITQIREIGIKIAQSIQQYFSNSCNLEEVTKLKKLGVSFQST---NSQK 586 Query: 594 --IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 + F K +VLTG+L + SR + L ++GA + S+S KT+ +I G AGSKL K Sbjct: 587 PTTQNIFTNKKIVLTGTLQKYSRLQIQQILEQMGAIITNSLSLKTNYLIVGINAGSKLTK 646 Query: 652 AQELGIEVIDEAEMLRLL 669 AQ+L I +I+E E+ +++ Sbjct: 647 AQKLQIPIIEEKELQQII 664 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/676 (36%), Positives = 381/676 (56%), Gaps = 37/676 (5%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++++ EL L H Y+ D+PEI DAEYD + +L +P L P VG Sbjct: 4 KKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFP----VVVGY 59 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F +++H PMLSL N+F EE + + ++ + L + + CE K+DG++ S Sbjct: 60 PASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSAR 119 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y NG LVS ATRGDG GE+I N++ I P+++ ++P LEVRGEVFL F+ + Sbjct: 120 YVNGKLVSCATRGDGKIGENIIDNMKVINGFPIEIM--DVPDLLEVRGEVFLDHDTFQTL 177 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 + F+NPRNAAAGSLRQL+P IT +R L +F Y ++G E H +L Sbjct: 178 ---------EGFSNPRNAAAGSLRQLNPEITNERNLQYFAYSASKIDGIE----HQEDVL 224 Query: 245 QFKKWGLPVSDRVTLCES-AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 F +++ + L S E+++FY V R + +DIDG+V KVN L +LG + Sbjct: 225 HFLSGRGFMTNPLRLASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGTL 284 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 + APRWA+A KFP+ T + ++ VGRTG ITPVA L+P+ + GV++S A+L+N DE Sbjct: 285 SDAPRWAIAHKFPSHRAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNEDE 344 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 +ER +R GD V++ RAGDVIP+V+ V +S R R +FP CP C S + R EA Sbjct: 345 LERKDIREGDLVIVERAGDVIPKVLEVDISYRTNQER-FIFPDKCPSCSSTLIRKNNEAA 403 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK-- 481 RC C Q + +KH VS +A D+DG+G I +EK ++ PAD+F+L + Sbjct: 404 TRCNNSKKCPEQVIQQIKHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRDE 463 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL--- 538 + + G KS +N++ ++ +++ + +F+++LGI+ +GE TA LA F + Sbjct: 464 IKKYDGWGEKSVENILKNIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFDK 523 Query: 539 ------EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + + +E++ + +G + + +FF++ N N++ L + I + Sbjct: 524 MSMLKDDTQTEDEIRNLDGMGSCICESLLDFFSDSDNCNMVKSLSNHVM-----ITDHTV 578 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 I +GK V TG+L ++R++AK + + G V S+SK+ D V+AGE AGSKLAKA Sbjct: 579 NIGGSLSGKKFVFTGTLLSITREEAKEIIKKAGGIVVNSISKQIDYVVAGEKAGSKLAKA 638 Query: 653 QELGIEVIDEAEMLRL 668 ELGI +I+E ++ Sbjct: 639 NELGIAIIEEKTLIEF 654 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust. Identities = 291/754 (38%), Positives = 388/754 (51%), Gaps = 91/754 (12%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +L +R Y+ DAPEI DAEYD L R L +LE HPEL++ DSPTQ VG Sbjct: 21 LREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEVG 80 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVTWCCELKLDGLA 120 AF+ +RH M SL++VF E + +R L + W E+K+DGLA Sbjct: 81 GEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALTQVRPGVAPRWLVEVKIDGLA 140 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V++ Y +G LV AATRGDG TGED+T+NVRTI IP +L GE PA EVRGEVF+ A Sbjct: 141 VALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPAEFEVRGEVFMSSAA 200 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N G FANPRNAAAG+LRQ DP +TA+RPL F +G+G +E L H Sbjct: 201 FAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHGIGSVEAFGLESQHE 260 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEE-----VLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 WGLPVS E A+E V+A + R L +IDG+V+K ++ A Sbjct: 261 A-YDALASWGLPVSPYTRRVEGADEEALAAVVAVIEEYGRRRHELIHEIDGIVLKADAFA 319 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q LG +R PRWA A+K+P +E T +RD+ VGRTG +TP A LEPV VAG VS Sbjct: 320 DQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFAVLEPVTVAGSTVSL 379 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE------DTREVVFPTHCP 409 ATLHN D ++ G+ IGD VV+R+AGDVIP+VV VL R + + RE V P HCP Sbjct: 380 ATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLREKAIEAGRELREFVMPAHCP 439 Query: 410 VCGSDVERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE---- 464 CG+ + EG+ RC C AQ ++H SR A DV+ +G++ LV+ Sbjct: 440 SCGTPLAPAKEGDVDLRCPNARSCPAQLAGRVEHLASRGAFDVEALGEEAARWLVQGPGE 499 Query: 465 --KEY-----------VHTPADLFKLTAGKLTGLERMGPKSA------QNVVNALEKAKE 505 E+ + A +F L +G + GP+ Q + A+ +E Sbjct: 500 DPAEHEGHVRPEGPGPITAEAQIFDLASGTPEAI--TGPRGEDGLTDLQRSLGAVRVWRE 557 Query: 506 T--------------TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL---QK 548 T + + G + A A F LE ++ + Sbjct: 558 GRTKVDGRMVPSGVFTLKPYFFTAGTAKRPSAPTANTLRLFDELEKAKSQPLWRTLVALS 617 Query: 549 VPDVGIVVASHVHNFF---------AEESNRNVISEL--------------LAEGVH--- 582 + VG A + F AE +R+ ++E+ AE H Sbjct: 618 IRHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEIDGVGPIIADALIEWFAEDWHREI 677 Query: 583 ---WPAPIVINAEEIDSP----FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 W A V +E D G TVV+TGSL SRD AK ++ G K +GSVSKK Sbjct: 678 VDRWTAAGVAMEDEQDESTPRTLEGLTVVVTGSLEGFSRDSAKEAILVRGGKASGSVSKK 737 Query: 636 TDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 TD ++AGEAAGSKL KAQ LG+ V+DEAE LL Sbjct: 738 TDFLVAGEAAGSKLDKAQSLGVPVLDEAEFTALL 771 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust. Identities = 248/689 (35%), Positives = 400/689 (58%), Gaps = 44/689 (6%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I ++ LR L + Y Y+ ++ P + D EYD ++EL +LET++PE +P+SP+++VG Sbjct: 22 ILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPSKKVG 81 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F++++HE+PM+SL N FDEE L F+ ++ + +++ ++ E K+DGL++S+ Sbjct: 82 GYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSD-FSYVVEPKIDGLSISV 140 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y++G L+ A TRGDG GED+T N++TI+++PL + + LE+RGEVFL + FEK Sbjct: 141 KYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIEYD---KDLEIRGEVFLTKKDFEK 197 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 IN D T K FAN RNAA+GSLR LD ITAKR L+ Y V + EL + Sbjct: 198 INSDPNLT--KKFANARNAASGSLRNLDSNITAKRNLSALFYYVP--KATELKIAKQYDV 253 Query: 244 LQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + K +P+S + C + + V+ ++ + R +DIDG+VIKVN E++G+ Sbjct: 254 LSWLDKQLIPISREIRHCNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIGY 313 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ P+WA+A+KFPA + T + ++ VGRTG I +A L+ + + G V ATLHN D Sbjct: 314 TSKFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNYD 373 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDVERVEG 420 I+ + + D V I +AG++IP+++ + +R D +VVF PT+CP C S + + E Sbjct: 374 YIKDHEIMLNDIVEIYKAGEIIPKIIRSIKEKR--DGSQVVFPEPTNCPSCDSKLVKKEQ 431 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT-- 478 E C C ++ + +++F SR AM+++G+ II QL + ++ DL++L Sbjct: 432 EVDLYCLNEN-CVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHK 490 Query: 479 ----------------AGKLTGLER--MGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 G T ER KS N++ A+EK+K + +FL LGI+ V Sbjct: 491 KEILIATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYV 550 Query: 521 GEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 G A L+ F ++E L A+ EE+++VPD G ++ + N+F++ N++++ G Sbjct: 551 GLRAAKALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQDLLWRAKKVG 610 Query: 581 VHWPA-----PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSK 634 +++ +V+ E + KT V+TGS ++ SR++ K + AKV+ SVSK Sbjct: 611 INFNYINEFNDVVVKNEH--QKYMNKTFVITGSFNK-SRNEIKNYIESVFNAKVSDSVSK 667 Query: 635 KTDLVIAGEAAG-SKLAKAQELGIEVIDE 662 KTD ++ GE AG SKL KA +L IE+I E Sbjct: 668 KTDYLVVGENAGDSKLKKANDLKIEIITE 696 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/544 (44%), Positives = 329/544 (60%), Gaps = 25/544 (4%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ LR+ LR H LY+ PEI DAEYD L EL +LE HPEL PDSPT+RVG A Sbjct: 47 RRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHPELSDPDSPTRRVGGA 106 Query: 66 PLAAFSQIRHEVPMLSLDNVFDE-------ESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 PL F+QIRH VPMLS+D++F++ E F ++ L+ E V E K+DG Sbjct: 107 PLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQT-ENVPVSVEPKIDG 165 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 +A+SI+Y NG L AATRGDG G+D+T+NVRTIR++PL L P LEVRGEVF+P Sbjct: 166 VALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLP-PGAPPVLEVRGEVFMPN 224 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F K+NE+ G FANPRNA AG+L+QLDPR A RPL F +G+G EG EL D Sbjct: 225 EAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAHGLGAYEGPELRDA 284 Query: 239 H-LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +L + G+P ++ V +S E ++ R TL + DG VIK++S A + Sbjct: 285 KDFWNML--RHCGIPCNEPVYYTDSLESTRQAVRDIDRLRHTLPYGTDGAVIKISSTATR 342 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG ARAPRWA A+KFP +++ T + ++ QVGRTG +TPVA L+PV ++G V+ AT Sbjct: 343 EALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQPVLLSGSTVARAT 402 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR--EVVFPTH--CPVCGS 413 LHN DEI+R +RIGD V++ +AG++IP V+ V LS+RP+D R ++ T CP CG+ Sbjct: 403 LHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSILEATKGLCPACGN 462 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 + + EG+ RCT C AQ + HF SR A+DV+ +G + + L + D Sbjct: 463 PIMKEEGKVAWRCT-NFTCPAQAVTGITHFCSRSALDVESIGSSVAEALRSSGLASSALD 521 Query: 474 LFKLTAGKLTGLE--------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 LF L +L L R G K+A+ ++AL+ A+ R+L A GI VGE A Sbjct: 522 LFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIAFGIPLVGEVVA 581 Query: 526 AGLA 529 LA Sbjct: 582 KALA 585 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 5/124 (4%) Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP---FAGKTVVLTG 607 ++G+ A + +FFA + + + L G++ P A ++ P +GKT V+TG Sbjct: 673 EIGVAAAKSLRSFFASAAGNHTMDVLHRLGIN-PQSQSYRASLLEIPAGSLSGKTFVITG 731 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 +LS RD + + G K G++SK T ++AG GSK KA +LG+ VI E + + Sbjct: 732 TLSH-PRDYFEQLIASHGGKATGAISKSTSCLLAGNGGGSKRDKALKLGVPVISEEDFYK 790 Query: 668 LLGS 671 ++G+ Sbjct: 791 MIGN 794 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 257/659 (38%), Positives = 382/659 (57%), Gaps = 13/659 (1%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L T L H+ Y+ ++ P I D YD MREL+E+E +HPE SPT +G P F Sbjct: 12 LCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMYLGDRPSGQF 71 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 + H PMLS+ NV+ + F R + L + + ELK+DG+AV+I YE + Sbjct: 72 PVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSP--GYSLELKIDGIAVAIRYEKRLF 129 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARR 190 A +RG+G GEDIT+NV TIR++P++L E P LEVRGEVFL FE++N R Sbjct: 130 AQALSRGNGVKGEDITANVSTIRSLPMRLPQEA-PEDLEVRGEVFLSYEAFEELNACQRE 188 Query: 191 TGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG 250 G FANPRNAA G+L+ L + AKR L YG L + +H L +WG Sbjct: 189 QGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYG---LITDQKKRSHFENLQLCSQWG 245 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 V+ C S +EV+ ++EE R L IDGVVIKV+++A Q++LG ++ RWA Sbjct: 246 FFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTSKHYRWA 305 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+K+ + T + D+ QVG+TG +TPVA L PV ++G VS A+L+N DEIE+ +R Sbjct: 306 IAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIEKKDIR 365 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 IGD V + + G+VIP++V + L++R ++ P+ CPVC V V+ + RC L Sbjct: 366 IGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPV--VKEKVSVRCINPL 423 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C E + F S+ A+++D +G+K++ +L E + + +D+F LT L + Sbjct: 424 -CSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGFKD 482 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 +S QN++ ++ AK+ R L AL I VG + A LA +FGTL+ + AS++EL + Sbjct: 483 RSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMSIE 542 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G VA+ + FF++ NR I + GV ++ + ++P GK VLTG+L Sbjct: 543 GIGPKVAASIVAFFSKHENREEIRRMQELGVQ----VLSKQSDKEAPLQGKVFVLTGTLQ 598 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 QM+R A+ R+ LG KV+ SVSK T VIAG AG KL KAQ+LG+ + +E+++ R+L Sbjct: 599 QMTRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESKLSRIL 657 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 253/713 (35%), Positives = 412/713 (57%), Gaps = 52/713 (7%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI---TPDS 57 +E ++L+ L + +H+ Y+ P I D+EYD L R + P+L P+ Sbjct: 14 IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELK 115 P ++G + ++ H +P LSL+ +++ E F R+ + K++ + + E K Sbjct: 74 PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DG ++I YE G V AA RGDG +GED+++ +R I IP ++ NIP +EVRGEV+ Sbjct: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIP-RVLSLNIPEIIEVRGEVY 192 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +N++ G K +ANPRNAA+G LR+L+P R L FF +G+G + E+ Sbjct: 193 ISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNP-TDITRYLNFFVHGLG--KTSEI 249 Query: 236 PDTHLGRLLQ-FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 +LQ + G PV++ V + ++++Y++++ R TL +DIDG+V KV+ Sbjct: 250 FAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEF 309 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 + Q+QLG AR+PRW ++ KF ++ T + D++ Q+GRTG +TPVARLEPV++ G L++ Sbjct: 310 SLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALIT 369 Query: 355 NATLHNADEIERL-----------GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV 403 NATLHN D I+ L +R+GD+V+++RAG+VIP+VV+++++ER D + Sbjct: 370 NATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFS 429 Query: 404 FPTHCPVCGSDVER----VEGEAVA--RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 FP+ CP+C S V R G+ VA RCTGGL C AQ+ E LKHFVSR A +++G+G + Sbjct: 430 FPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQ 489 Query: 458 IIDQLVEKE----YVHTPADLFKL------TAGKLTGLERMGPKSAQNVVNALEKAKETT 507 +D + E + PAD+F L + K+ + G S N+ +++ K + + Sbjct: 490 QLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNIS 549 Query: 508 FARFLYALGIREVGEATAAGLAAYFGTLE--ALEAASI--------EELQKVPDVGIVVA 557 RF+++LGIR VG A LA Y+ + + A E +I L +VP VG ++A Sbjct: 550 LERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIA 609 Query: 558 SHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE-IDSPFAGKTVVLTGSLSQMSRDD 616 + F+ N + LL E +P + E+ + S K +V TG+L ++ R Sbjct: 610 QAIVEFYQNPRNICAVEALLKE----VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHK 665 Query: 617 AKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 A+ + +LGA V+ +S+KTD++I G+ GSKL KAQ+LG+++++E + L LL Sbjct: 666 AQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 221/662 (33%), Positives = 373/662 (56%), Gaps = 16/662 (2%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 +LR L + Y Y+ D +I D +D+ + EL LE K+PE P SPT ++GA Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYPEFYDPTSPTIKIGAEIHEP 86 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 + H+ M SL + ++ + + K++ + ++ CELK DG++++++Y+NG Sbjct: 87 STVFYHKYKMYSLQKTYSKKELIIWKKKISKSI---HTFSFVCELKYDGVSINLIYKNGF 143 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 L +A TRG+G GED+T N++TI+ +PLKL G N PA LE+RGEVFL F +IN+ Sbjct: 144 LTNAGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRI 203 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKK 248 ++G +ANPRN A+G+L+ D + +R L FC V+ G LP DT L K Sbjct: 204 KSGKTPYANPRNTASGTLKIQDRKKVRQRNL--FCIAFHVV-GKNLPFDTQYESLKHIKN 260 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 WG + + C++ EEV F + L + IDG+VIKVN +Q LGF + PR Sbjct: 261 WGFQIPETARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIKVNEYQKQSLLGFTNKYPR 320 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 WA+A+KF + T + + FQVGRTG +TPVA + P+ ++G ++ L+N I+++G Sbjct: 321 WAIAYKFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMG 380 Query: 369 LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTG 428 + GD +++ + G++IP+V + + +R V F CP C S + + + CT Sbjct: 381 IYHGDTLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKKCPSCNSVLTK--NNELFYCTN 438 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 C +QR E ++HFVS +AM++ +G+++I +L +K ++++ +L++L +L ++ + Sbjct: 439 Q-NCFSQRIEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGV 497 Query: 489 GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQK 548 K A +++N ++K+KE F+R LYALGIR VGE + L F + +L A+ + L Sbjct: 498 KEKLADSIINNIKKSKENPFSRVLYALGIRHVGEDISKKLTKQFLDINSLMHANYDHLIS 557 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGS 608 + +G + + +F+ NR+ + L+ G+H+ + S GK+ V TG Sbjct: 558 ISGIGKKITESIITYFSIYENRHAVQMLIKYGLHFSK-----CSKKLSSLEGKSFVFTGK 612 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVIDEAEMLR 667 LS M+R A+ + LG KV +V+ + + ++ G+ GSK K+ + ++++ E L Sbjct: 613 LSCMTRHKAQNMVENLGGKVYNTVNNQINFIVIGKNFGSKFKKSMKKNHVQILTENLFLD 672 Query: 668 LL 669 +L Sbjct: 673 ML 674 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 257/656 (39%), Positives = 382/656 (58%), Gaps = 30/656 (4%) Query: 14 TLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQI 73 TL Y+ D P D EYD L + + E ++PEL SPT+R+G A FS++ Sbjct: 12 TLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIGGAISEGFSKL 71 Query: 74 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 133 H M S++++FD+ LA+ R + + E K DG ++++ YE GVL+SA Sbjct: 72 AHGAQMWSMEDIFDDADLLAWLARGE-----KSGAQFYVEPKFDGASLNLTYEGGVLISA 126 Query: 134 ATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGG 193 ATRGDG GED+T N R I+++PL++ R+E+RGE + ++ F+ +N++ G Sbjct: 127 ATRGDGLIGEDVTQNARAIKSVPLQIP---YAGRIEIRGETLIAKSDFDALNDERAANGE 183 Query: 194 KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF-KKWGLP 252 +F+NPRNAAAGSLRQLD I AKR L F +GVG L ++++F + G Sbjct: 184 SLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVGE---HSLSFALHSQIMEFVRSLGFL 240 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 + +C+SA E+ A Y + R + +DG+VI+VN L++ Q+G+ + PR+ VA Sbjct: 241 RDEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTVKFPRFMVA 300 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 +KFPA E++T +R++ QVGRTGA+TPVA + V++ G VSNATLHN DEI RLGL Sbjct: 301 YKFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEIARLGLMKN 360 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 D V I R+GDVIP++ +V R E+ P CPVCG + ++ A+ +C L C Sbjct: 361 DFVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKL--LDEGALIKCQ-NLDC 417 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS 492 A+ SL +F S++ M+++G+ D I QL E + D++ L A L LE K Sbjct: 418 KARVIGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLADLEGFADKK 477 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 N++ A+ +K RF+ +LGI +GE A +AA FG + L+ AS +E+ ++ Sbjct: 478 ISNLLGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFGQ-DWLD-ASEDEILRLEGF 535 Query: 553 GIVVASHVHNFFAEESNRNVI---SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 G +A + F + NR I SE++ AP + + S F ++VV+TG+L Sbjct: 536 GEAMARSLAEFC--KINREKILNLSEII-------APRAPQMQTVKSAFTDRSVVITGTL 586 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 S+ RD+ KA+L+ +GAKV GSVS KTD V+AG AGSKL KA+ LG+ VIDE+E Sbjct: 587 SR-PRDEFKAKLLAMGAKVQGSVSAKTDFVLAGAEAGSKLQKARSLGVRVIDESEF 641 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/669 (36%), Positives = 400/669 (59%), Gaps = 12/669 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L + Y+ + I D E+D L++EL LE K+P+ SPT VGA+ Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEISSPTTSVGAS 88 Query: 66 -PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F ++ H PMLSL N ++ + F +R++ ++ +++ +C E+KLDGL++S+ Sbjct: 89 LKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSISLT 148 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV A TRGDG GED+T N+ I +I L +E+RGEV LP A FEK+ Sbjct: 149 YRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQ---AIDMEIRGEVVLPLASFEKL 205 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRL 243 N + G ++FANPRNAA+G+LRQLD +I R L + Y + +E +L +H + Sbjct: 206 NNERLEKGEELFANPRNAASGTLRQLDSKIVKDRGLDAYFYFL--VEADKLGLKSHSESI 263 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + G+ + L E+++++ + E++R +L ++ DG+VIKV+ + +++G+ Sbjct: 264 KFLESMGIKTTGIFELLETSKDIEKRINYWEKERESLPYETDGLVIKVDEINLWDEIGYT 323 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 ++ PRWA+A+KFPA + T + DV +QVGRTG +TPVA L+ V ++G V A+LHN E Sbjct: 324 SKTPRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNISE 383 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I+R +RIGD+V I +A ++IPQVV + ER + + + PT CP+C +ER EG Sbjct: 384 IQRKDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGLVD 443 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK-- 481 +C C A+ + +++FVSR A+++ G+G KI+++ ++ Y+ T D+F L + Sbjct: 444 IKCINEE-CPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNHREA 502 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L +++MG KS +N++N++E++K + + LYALGI E+G+ T+ LA ++ L A Sbjct: 503 LENIDKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKILAKASKNIDKLMAM 562 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAG 600 + E+L + +G + A+ + FF +E N+ +I L +G+ + + + ++ F G Sbjct: 563 TFEDLTSIEGIGEIAANEIIAFFTKEKNQKIIQGLKEKGLKFEIKESEASVQNVNPNFVG 622 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL-GIEV 659 K + TG+L +R+ K + +LG K SVSK D +I GE AGSKL KAQE+ I++ Sbjct: 623 KNFLFTGTLKHFTREQIKEEIEKLGGKNLSSVSKNLDYLIVGEKAGSKLKKAQEIPTIKI 682 Query: 660 IDEAEMLRL 668 + E E + L Sbjct: 683 LTEEEFIEL 691 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 256/665 (38%), Positives = 386/665 (58%), Gaps = 36/665 (5%) Query: 13 TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQ 72 TL HH Y+ +D + DA YD L +EL+ E K+P I +SPTQ+VGA +F++ Sbjct: 16 NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQKVGATATNSFNK 72 Query: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 132 H + M SLD+VF++ A+ +R+ LK ++ C KLDG+++++LY++G LVS Sbjct: 73 NPHLMRMWSLDDVFNQSELQAWLQRI---LKTYPSASFVCSPKLDGVSLNLLYQHGKLVS 129 Query: 133 AATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTG 192 A TRG+G GE +T+N + I IP H +E+RGEV + + F+ +N++ Sbjct: 130 ATTRGNGLEGELVTNNAKHIANIP---HFIAYDGEIEIRGEVIISKEDFDALNKERLNAN 186 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKK---- 248 +FANPRNAA+GSLRQLD IT KR L F +GVG H L FK+ Sbjct: 187 EPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVG---------KHSLNFLSFKECLDF 237 Query: 249 ---WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 G + L ++ +E+ YH + +R +DG+VI VN L Q++LG+ + Sbjct: 238 IVSLGFSAIQYLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQK 297 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 +P++A A+KFPA E+ T + V QVGR+GAITPVA LEPV +AG +++ ATLHN EIE Sbjct: 298 SPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHNYSEIE 357 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 + + + DKVV+ R+GDVIP+++ + + R ++++ P CP+C E + E Sbjct: 358 KKNIMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPKVCPICSH--ELLCEEIFTY 415 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C L C A+ KESL HF S+ A+++ G+GDK+I+QL E++ + DL+ L L L Sbjct: 416 CQ-NLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLEDLMRL 474 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEALEAASIE 544 ++ K AQN+++A++K+K R + ALGI +G+ + LA Y LE EA +E Sbjct: 475 DKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAKYGLNVLEKSEAEFLE 534 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 + G+ + + NF+A SN+ I L + + +E S F KT+V Sbjct: 535 ----MEGFGVEMVRSLVNFYA--SNQEFIRSLFELLNPKNSDMAEEKQESSSVFNNKTIV 588 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG+LS+ R + L LGAK+ SVS KTD +I GE AGSKLA A++ G+ V++E E Sbjct: 589 LTGTLSK-PRQEYAQMLENLGAKITSSVSAKTDFLIVGENAGSKLALAKKHGVSVLNEEE 647 Query: 665 MLRLL 669 +L+ L Sbjct: 648 LLKRL 652 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 255/699 (36%), Positives = 396/699 (56%), Gaps = 48/699 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++S E+ L ++T L + Y+ +D P D EYD L + ++ E + + I DSPTQ Sbjct: 4 IKSHEEYLESIKT-LNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSPTQ 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT----------- 109 R+G L FS+ +H+ M SL+++F+ + ++ + + +K T Sbjct: 63 RIGDKILKDFSKNKHKKRMWSLEDIFNPSDLDEWLTKLSNAIARVQKTTLSPTLFDTETQ 122 Query: 110 --------WCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG 161 +C K DG+++++LYENG+L SA TRGDG GE +T N +T+ ++P H Sbjct: 123 IDSINNLAFCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLP---HT 179 Query: 162 ENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLT 221 +E+RGEV L + F ++N++ R +FANPRNAAAGS+RQLD +T +R L+ Sbjct: 180 IPFKGSIEIRGEVVLSKENFARLNKEQERNNKALFANPRNAAAGSMRQLDSNLTRERNLS 239 Query: 222 FFCYGVGVLEGGELPD----THLG---RLLQFKKWGLP---VSDRVTLCESAEEVLAFYH 271 F +G+G ++ EL ++LG L+ ++G +RV +AE + Y Sbjct: 240 FVAWGIGSVDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV----NAESIEREYQ 295 Query: 272 KVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQV 331 K+ DR F +DG VI ++ LA Q++LGF +APR+A A+KFPA E + + + QV Sbjct: 296 KILNDRDNYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQV 355 Query: 332 GRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV 391 GRTG ITPVA +P + G +S ATLHN EI++ +RI D ++ R+GDVIP++ V+ Sbjct: 356 GRTGIITPVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVL 415 Query: 392 LSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDV 451 R D ++ PTHCP+C ++ + CT C A K L HF S++ MD+ Sbjct: 416 HERRKGDEIKIAKPTHCPICSHELSY--EDIYIYCTNP-NCDAIIKAKLIHFASKKCMDI 472 Query: 452 DGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKET-TFAR 510 DG+G II+ LV+ + D++ L E K AQN++NA++ + E F R Sbjct: 473 DGLGSSIIELLVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWR 532 Query: 511 FLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 F++ALGI +GE + LA+Y E + IE+LQ++ G +A ++F N+ Sbjct: 533 FIHALGILHIGEVASKKLASY--GYEIFD-YDIEKLQEIEGFGKDMAQSFYDFCIH--NK 587 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 + I+E + E + + DS F KT V+TG+ + +SRD KA+L LGAKV+ Sbjct: 588 DFINE-MQEILKPQLQVKTTQINTDSIFYQKTCVITGTFA-LSRDSIKAKLESLGAKVSS 645 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 S+S KTD +IAGE AGSKL KAQELGI++I+ +E++++L Sbjct: 646 SISTKTDFLIAGEKAGSKLTKAQELGIKIIESSELMQIL 684 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 248/670 (37%), Positives = 382/670 (57%), Gaps = 21/670 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M ++ ++ +L +++++Y Y+V+ P I D EYD L + L++LE HP+LI DSPTQ Sbjct: 1 MMDVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F ++ H PMLSL+N F + F + + N K + E K+DG++ Sbjct: 61 RVGGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNIN--FQTNSKNEFVVEPKIDGVS 118 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y+NGVLV A TRGDG+ GED+ +NV+TI++IPL + +E+RGE+F+ + Sbjct: 119 ISLTYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIP---FTKTIEIRGEIFVDKKT 175 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPL-TFFCYGVGVLEGGELPDTH 239 F IN K FAN RN AAG++R L+ ITA+R L F Y LE E T Sbjct: 176 FLAINNQLE----KPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLE--ESITTQ 229 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L Q K+W PVSD + + ++ +++ + ++ R L F++DG+VIK+NSL +Q Sbjct: 230 TMVLEQLKQWKFPVSDTIRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQ 289 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +++PRWA+AFKF + T + V +GRTG + A+LE V++ G V+ ATLH Sbjct: 290 LGATSKSPRWAIAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLH 349 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N D I+ +RI D VVI +AG++IP+V+ V L +R DT + +CP C S + ++ Sbjct: 350 NFDYIKTKDIRINDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIV 409 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E CT C + + + +FVS+ AMD++G+ I +L E V + DL+ L Sbjct: 410 DEVDQYCTNE-TCKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKD 468 Query: 480 GKLTGLE---RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 K L+ ++G K +V+ +E +K+ AR L LGI+ VG A LA +F ++ Sbjct: 469 KKNQVLKLDLKIGDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIK 528 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINAEEID 595 AL+ AS+E L + DVGI VA ++N+F + ++ +I +L V P+ IN E + Sbjct: 529 ALQHASLENLISLNDVGITVAESLYNWFHDPNHLQLIEQLELRQVKTDQLPLKINFET-N 587 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARL-VELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQ 653 S + K ++TGS + +SRD K L + + A V D VIAG K+ A+ Sbjct: 588 SIYFQKRFLITGSFN-ISRDQIKDLLSAKFDCQFASEVKPTVDFVIAGNKPTLRKINHAK 646 Query: 654 ELGIEVIDEA 663 EL I +I+EA Sbjct: 647 ELNIPIINEA 656 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 257/665 (38%), Positives = 381/665 (57%), Gaps = 22/665 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +++ E TL Y+ DAP D EYD L ++ E E +P I+ SPT+RVG Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + RH V M S++++F E LA+ KR + E + + + K DG ++++L Sbjct: 63 EVSDGFVKARHSVRMWSMEDIFSFEELLAWLKR-----GDKEGLEFALQPKFDGASLNLL 117 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG LV A TRGDG TGED+TSN + I+ IPL++ R+E+RGEV + + F++I Sbjct: 118 YENGALVRAITRGDGITGEDVTSNAKVIKNIPLQIA---YNGRIEIRGEVVIAKNDFDEI 174 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G +NPRNAAAGSLRQLD +TA R L F +G G G +T+ + Sbjct: 175 NFARAQRGEPQLSNPRNAAAGSLRQLDSAVTASRRLRFKPWGYGEQNLG--LETYSQMMD 232 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 G + +C +AE++ Y ++ R + F +DG+V++V S+A E+LG+ Sbjct: 233 FIYSQGFEREEFFKICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTE 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + P++ VA+KFPA E+ T + DV FQVGR+G +TPV LEPV++ G V +ATLHN DEI Sbjct: 293 KFPKFMVAYKFPAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEI 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ERLG++ GD + I R+GDVIP++ V R + P CPVCGS + ++ Sbjct: 353 ERLGVQKGDFISIIRSGDVIPKITGVFKQRRDGSQMPIERPRECPVCGSML--LDEGVFV 410 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ SL HF S++ +++DG+G+ I++QL E V AD+++LTA L Sbjct: 411 KCQ-NLECKARVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLAS 469 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE K N++ A+E ++ F+ +LGI +GE A +A + + S Sbjct: 470 LEGFKDKKIANLLGAIEASRTPALHSFIASLGIEHIGEVAAKKIAQIYP--QNWRELSFG 527 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 E+ + G +A F + NR + E+L + +P E S +GKT V Sbjct: 528 EVAAIEGFGEAMAESYAEFM--QVNRQNLDEIL----RFVSPQAQIYETKQSAISGKTFV 581 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 +TG+LS+ SRD+ K L GAKV+GSVSKKTD V+ G+ AGSKL KA+ELG++ I E E Sbjct: 582 ITGTLSK-SRDEFKRVLEANGAKVSGSVSKKTDFVLYGDEAGSKLDKARELGVKAITEDE 640 Query: 665 MLRLL 669 + R++ Sbjct: 641 LRRMI 645 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 253/672 (37%), Positives = 380/672 (56%), Gaps = 20/672 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ EL+ L Y Y+V+D P +PD YD+ MREL ELE +P+ T +SP+ Sbjct: 1 MDRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT---WCCELKLD 117 RVG F++++H+ PMLSL N FD F++ Q N V + E K+D Sbjct: 61 RVGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQDNQ-----NASVDLKGYVVEPKID 115 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL++SI+Y+N L A TRGDG GED+TSN+ TI+ IP + + +EVRGEV++ Sbjct: 116 GLSISIIYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMA 175 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLT-FFCYGVGVLEGGELP 236 F ++N++ + K FANPRNAAAG+LR LD I A+R L+ F Y V E G Sbjct: 176 FHDFYEMNDNLEESDKK-FANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELG--I 232 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 TH + K VSD + ++ +EV+ + + R L + IDG+VIK+N+L Sbjct: 233 KTHYESIQFLKDNKFKVSDLIVKVDTIDEVINQIDRYTKVRNDLSYMIDGIVIKINNLEV 292 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 +++G+ ++ P+WA+A+KFPA + + ++ VGRTG I+ VA+++P+ + G +V A Sbjct: 293 YDEIGYTSKFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYA 352 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN D I+ +RI D++ I +AGDVIP V V LS+R ++ T+CP C S + Sbjct: 353 TLHNFDFIKEKDIRINDEIKIYKAGDVIPYVDGVDLSKRLANSVPYESITNCPSCQSVLV 412 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R E RC C E + +FVSR M+++GM D II++ + + ADL+ Sbjct: 413 RENDEVDQRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYY 472 Query: 477 LTAGK---LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L K L ++ KS N++N++ +K + L A GIR VG A LA F Sbjct: 473 LQKHKEFILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGIRHVGPNLAKKLAKQFK 532 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP---IVIN 590 T+ L A+ EL V G A + N+F ++ N +++++L GV+ I + Sbjct: 533 TMTTLMHANFGELTNVDACGEKAALSLINWFNDDHNVSLVNQLQQVGVNMEYIDDFIYDD 592 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTDLVIAGEAAGSKL 649 I + KT V+TGS S +SRD+ K L + AKV SVSKKTD V+AG AG+KL Sbjct: 593 NINIIDEYKNKTFVITGSFS-ISRDEIKTILEKYYHAKVKNSVSKKTDYVLAGIEAGTKL 651 Query: 650 AKAQELGIEVID 661 KA+ LG+++I+ Sbjct: 652 EKAKLLGVKIIE 663 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 273/736 (37%), Positives = 389/736 (52%), Gaps = 79/736 (10%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETK---HPELITPDSPT 59 S+++Q L ++ +++ Y++ +PDA+YD L+ EL +E + P+ SPT Sbjct: 52 SLQEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGGAPQ----GSPT 107 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 QRVG F ++ H PMLSLDN F E A+ RV L V++ CE+K+DGL Sbjct: 108 QRVGGTFSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGG-AVSYLCEVKIDGL 166 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI--PARLEVRGEVFLP 177 AVS+ YE G LV A TRGDG TGED+T NV+TIR+IP +L G+ P +E+RGEVF+ Sbjct: 167 AVSLTYERGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMK 226 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 A F +N+ R GGK FANPRNAAAGSLRQ DPR+TA+R L+ + +G+G LE Sbjct: 227 VADFADLNDSQARQGGKTFANPRNAAAGSLRQKDPRVTAQRRLSMYAHGIGALEWDGQSP 286 Query: 238 THLGR----LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 L R +++WG+PVS ++ + V E+R ++ ++DG VIKV+ Sbjct: 287 VDLARQSDVYALYQQWGIPVSSHNSVEHDLDAVTRKIEYYRENRHSIEHELDGFVIKVDE 346 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 +A Q+QLG +RAPRWA+AFK+P +E T + D++ VGRTG +TP +EPV VAG V Sbjct: 347 VAAQKQLGSTSRAPRWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGSTV 406 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 S ATLHN E+ R +R GD V++R+AGDVIP+++ V S RP+ + PTHCP CG+ Sbjct: 407 SMATLHNFHEVRRKDVRPGDTVIVRKAGDVIPEILGAVESLRPDGLPQWEPPTHCPSCGT 466 Query: 414 DV-ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH--- 469 ++ E EG+ RC C +Q +E + SR A D++ +G + L + E Sbjct: 467 EIREAKEGDKDLRCPNAQSCPSQLRERVFALASRGAFDIEALGWESAVALCDPESSRPVG 526 Query: 470 -----------TP-----ADLFKLTAGKLTGLERMGPKSAQNVVNALE-KAKETTFARFL 512 TP A +F L A + + L R S ++VV E K K T + Sbjct: 527 PDAPQLDGPPLTPVLTSEAHIFDL-ADENSSLTR----SLKDVVVWRERKLKSGTRWELV 581 Query: 513 YALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV---------------------PD 551 R ++ A E ++ A + L +V Sbjct: 582 PYFYTRATASKSSVPTATTVKLFEEVQKAKSQPLWRVLVALSIRHVGPTAARALATEFGS 641 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAE------GVHWPAPIV------------INAEE 593 + + A+ V A + + I+E + E G W IV I E Sbjct: 642 MDRIRAASVSELAAVDGVGSTIAESVVEWFREVDGNQWRPAIVAAWAKAGVSMEDIPDES 701 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + G TVV+TG L +RD K +V G K +GSVSKKTD V+ G AGSK KA+ Sbjct: 702 VQRTLEGITVVVTGGLENFTRDGVKEAIVARGGKASGSVSKKTDFVVVGANAGSKETKAR 761 Query: 654 ELGIEVIDEAEMLRLL 669 ELG+ +++E E RLL Sbjct: 762 ELGLRILNEEEFTRLL 777 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 285/744 (38%), Positives = 391/744 (52%), Gaps = 80/744 (10%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E+ ++ LRT + H Y+ DA + DAEYD L+ EL LE HP L + DSPTQ Sbjct: 23 LEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLRSQDSPTQ 82 Query: 61 RVGA-APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG A F+ + H MLSLDNVF EE + +V+ R + +V + ELK+DGL Sbjct: 83 TVGGRAETTLFAPVTHAERMLSLDNVFSEEELAEWAAKVE-RDAGSGRVRYLSELKIDGL 141 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+++ YE+GVLV+AATRGDG GED+T NV T+ +P +L G P +EVRGE+F P A Sbjct: 142 AINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPPLVEVRGEIFFPVA 201 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQ------------LDPRITAKRPLTFFCYGV 227 F+++N G +VFANPRNAAAGSLRQ + RI R L +G+ Sbjct: 202 EFDELNARQLEVGERVFANPRNAAAGSLRQKEEGKSPARLELMRARI---RRLRMLVHGI 258 Query: 228 GVLEGGEL-PDTHLGRLLQ----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 G EL D H+ + WGLP+S + + EV F + R + Sbjct: 259 GAWPVRELASDAHVSAQSEVYGLLAGWGLPISTHFRVFDDISEVTEFVRRHGAHRAEVEH 318 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 IDG+V+KV+ L E+LG +RAPRWA A+K+P +E T + D+ VGRTG TP A Sbjct: 319 QIDGIVVKVDDLGLHEELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRATPFAV 378 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 +E V VAG V ATLHN ++ G+ IGD VV+R+AGDVIP+V+ V+ R RE Sbjct: 379 MEKVEVAGSEVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREF 438 Query: 403 VFPTHCPVCGSDVERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD---KI 458 V PT CP C + + EG+ RC C AQ + ++H SR A+D++G+G+ Sbjct: 439 VMPTLCPECQTPLRPAKEGDIDLRCPNARSCPAQVRGRVEHVASRGALDIEGLGEVAAAA 498 Query: 459 IDQLVEKE--YVHTPADLFKLTAGKL-----------TGL----------ERMGP----- 490 + Q +E E + T A LF+LT L TG+ +R+ P Sbjct: 499 LTQPLEPEDPPLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTPFRRRR 558 Query: 491 ----------------------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 KSA+ ++ L+KAK R L AL IR VG A L Sbjct: 559 APKRDGVFDPAAPWGDEDSVPSKSAEVLLENLDKAKTQDLWRILVALSIRHVGPVAARAL 618 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 A +FG+L+A+ +AS EEL V VG ++A + ++F + +R ++ GV P Sbjct: 619 AGWFGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWHREIVDRWRKAGVVMEVPGH 678 Query: 589 INAEEIDSPFAGK---TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 + TVV TGSL +R+ A ++ G K SVSKKT V AG A Sbjct: 679 PGPGAAAAAGGVLAGLTVVATGSLEGYTREGALEAIMAAGGKAGSSVSKKTHYVAAGPGA 738 Query: 646 GSKLAKAQELGIEVIDEAEMLRLL 669 GSKL KA+ LG+ +ID AE RLL Sbjct: 739 GSKLGKAEALGVRIIDAAE-FRLL 761 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/463 (45%), Positives = 291/463 (62%), Gaps = 5/463 (1%) Query: 26 DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNV 85 D I D E+D+L+ EL +LET+ P+L+ PDSP+QRVG F + H MLSL N Sbjct: 3 DQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVGGTITKEFETVVHAYKMLSLGNT 62 Query: 86 FDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 + +E +AF++RVQ L N + CE+K DG+A+S++YENG LV A TRGDGT G+D+ Sbjct: 63 YSKEELIAFDERVQKGLGGN-PYEYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDDV 121 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 T+NVRTIR IPL + G+ IP R EVRGE+FLP FEKIN + G + ANPRNAA+G Sbjct: 122 TANVRTIRNIPLYVKGDKIPERFEVRGEIFLPHREFEKINAERNENGEALMANPRNAASG 181 Query: 206 SLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEE 265 +L+ D + AKR L CY +L + H + + WG VS + E+ Sbjct: 182 TLKMQDSSVVAKRRLN--CYFYQLLGEDIGVNAHDEAISLIESWGFNVSPTYRKTNTIED 239 Query: 266 VLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVR 325 VL + E R TL D DGVV+K+N Q+E+LGF A+ PRWA+A+K+ A+ T + Sbjct: 240 VLTYIEDWREKRFTLPLDTDGVVLKINDYEQREELGFTAKNPRWAIAYKYKAESSETELL 299 Query: 326 DVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIP 385 V +QVGRTGAITPVA L PV +AG V A+LHNA+EIERLGL GD V + + G++IP Sbjct: 300 SVTYQVGRTGAITPVANLAPVSLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEIIP 359 Query: 386 QVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVS 445 ++ V L +R D++ + + + CP CG+ +ER EGEA C C Q ++HFV Sbjct: 360 KITGVSLEQRKPDSKPIEYISECPECGTPLERKEGEAKHFCPNASNCPPQVLGRIEHFVH 419 Query: 446 RRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK--LTGLE 486 +RAMD+D +G + I L+++ ++ PAD++ L + + L GLE Sbjct: 420 KRAMDIDSLGTERIRALIDQGFIQNPADIYDLESKQSDLLGLE 462 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 495 NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 N++ + +K+ F + L+ALG+R +GE TAA LA +FG+++ L AS EEL ++ VG Sbjct: 615 NMMEGIAASKKQPFEKVLFALGVRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGE 674 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSR 614 + +H FF+ + N ++IS L G+ + A I + + GK ++ +G L+Q R Sbjct: 675 TLVQSIHEFFSRQENLDIISRLKKSGLQFDAE-QIETVSLGNALEGKKILASGKLNQFKR 733 Query: 615 DDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 D+ + G + SVSKK D +I GE G SK KAQ+LGI +I E + L++L Sbjct: 734 DEIVDFIKSHGGQYVSSVSKKLDFIIEGEDMGPSKKEKAQKLGIPLISEEDFLKML 789 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 253/623 (40%), Positives = 335/623 (53%), Gaps = 55/623 (8%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + + EL T+ H++ Y+V DAP + DAEYD L+REL ++E HP+L TPDSPTQ Sbjct: 41 LSAARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQ 100 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG F+ + H MLSLDN F+ E A+ +RV R +V + CE+K+DGLA Sbjct: 101 RVGGTFSTDFAAVDHREQMLSLDNAFNAEDLDAWAERVH-REIGTSQVHYLCEVKIDGLA 159 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQ 178 +++LYE G LV AATRGDG TGED+T NV TI IP L +P +E+RGEVF+ Sbjct: 160 IALLYEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRGEVFMLV 219 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F +NE G FANPRNAAAGSLRQ +P+ITA RPL + +GVG L + Sbjct: 220 DQFAALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHWEAGTPS 279 Query: 239 HLGRLLQ----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L R F+ WG+PVSD + E V + R + ++DG+V+KV+ L Sbjct: 280 ELRRQSDAYDYFRAWGVPVSDHNRVVEGMPGVQEMIDYYGDHRHDIEHELDGIVVKVDEL 339 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q QLG +RAPRWA+A+K+P +E T + D+ VGRTG +TP +EPV VAG VS Sbjct: 340 ALQRQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVLVAGSTVS 399 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN E+ R G+ IGD VV+R+AGDVIP++V V+ R RE V PT CP CG+ Sbjct: 400 MATLHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTECPSCGTT 459 Query: 415 VERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY------ 467 + EG+ RC C +Q +E + H R A D++ MG + LV+ E+ Sbjct: 460 LAPAKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMGWEAAIALVDPEHNRPESA 519 Query: 468 -----------VHTPADLF---------------KLTAGKLTGLERMGP----------- 490 + T A F K AG TG+ P Sbjct: 520 DAEGVPVQVPVLETEAGFFDFEVDALADVLVWREKKKAGVGTGVWEQVPFFWTKATAKTP 579 Query: 491 -KSAQNVVNAL---EKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 K + V EKAK R L AL IR VG A LA F ++EA+ AA+ EEL Sbjct: 580 SKPSATTVKFFEEREKAKARPLWRVLVALSIRHVGPTAARALATAFESVEAIMAATEEEL 639 Query: 547 QKVPDVGIVVASHVHNFFAEESN 569 VG +A V +F S+ Sbjct: 640 AATEGVGPTIARAVRIWFNGRSS 662 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/78 (53%), Positives = 52/78 (66%) Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 E I G TVV+TGSL +RD K ++ G K AGSVSKKTD V+ GE AGSK AK Sbjct: 760 ESIVRTLEGFTVVVTGSLEGFNRDQVKEAIIVRGGKAAGSVSKKTDFVVVGENAGSKEAK 819 Query: 652 AQELGIEVIDEAEMLRLL 669 A+ELG+ ++DEA + LL Sbjct: 820 ARELGLTILDEAGFVTLL 837 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 277/719 (38%), Positives = 383/719 (53%), Gaps = 77/719 (10%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA-APLAAFSQIRHEVPML 80 Y+ +D + D EYDR++R L ELE HPEL + DSPTQ VG A F+ + H ML Sbjct: 23 YYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQTVGGRAQTTLFAPVEHAERML 82 Query: 81 SLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGT 140 SLDNVF E+F A+ +++ +V + CELK+DGLA+++ YENGVLV+AATRGDG Sbjct: 83 SLDNVFSFEAFEAWAAKIER--DAGRRVDYLCELKIDGLAINLRYENGVLVTAATRGDGV 140 Query: 141 TGEDITSNVRTIRAIPLKLHGEN-IPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANP 199 GED+T N+R I AI +L G P +EVRGEVF P A FE++N + + G +VFAN Sbjct: 141 VGEDVTENIRHIPAITQRLSGAGPFPPVVEVRGEVFFPVAKFEELNANQQAAGERVFANA 200 Query: 200 RNAAAGSLRQLDPRITAKRP------------LTFFCYGVGVLEGGELPDTHLGRLLQFK 247 RNAA+GSLRQ + K P L +G+G + T G + Sbjct: 201 RNAASGSLRQ---KAEGKNPAQRRLMRDRLGRLRMLVHGIGAWPNPPVA-TQSGVYELLR 256 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAP 307 WGLP S + + +E F + E R T+ +IDGVVIKV+ L ++LG +RAP Sbjct: 257 SWGLPTSAHGRVFGTVQEAADFIGRSAERRDTVEHEIDGVVIKVDELVLHDELGATSRAP 316 Query: 308 RWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERL 367 RWA+A+K+P ++ T + D+ VGRTG TP A +E V VAG V ATLHN D ++ Sbjct: 317 RWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMEKVKVAGSEVRQATLHNQDVVKAK 376 Query: 368 GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVARC 426 G+ IGD VV+R+AGDVIP+V+ V+ R RE PT CP CG+ + EG+ RC Sbjct: 377 GVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFAMPTDCPECGTPLAPAKEGDIDLRC 436 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY-----VHTPADLFKLTAGK 481 C AQ + ++H SR +D++ +G+ L + + + T A LF L Sbjct: 437 PNAEFCPAQVRGRVEHIGSRGGLDIEALGEVAAAALTQPRFPERAPLPTEAGLFGLRLED 496 Query: 482 L-------------------TGLERMG-----------------------------PKSA 493 L TG+E++ KSA Sbjct: 497 LFPIEVVVRDSETGLPKLTETGVEKVDAPFRRRRQKKDGAFDPEAEAFDGDEIAVPSKSA 556 Query: 494 QNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVG 553 ++ L A+ R L +L IR VG A LA +FG+L+A+ AAS +EL V VG Sbjct: 557 IELLANLRAARTKPLWRILVSLNIRHVGPVAARALADHFGSLDAIRAASRDELAAVDGVG 616 Query: 554 IVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP---FAGKTVVLTGSLS 610 +VA V ++F + ++ +GV + P D+ +G TVV TGSL Sbjct: 617 GIVADAVLSWFEIGWHCEIVENWARDGVQFAIPGHPGPGRADTGGGVLSGLTVVATGSLE 676 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +R+ A+ +V G K A SVSKKTD V AG AGSKLAKA+ELG+ V+D A+ L+ Sbjct: 677 GYTREAAQEAIVAAGGKAASSVSKKTDFVAAGPGAGSKLAKAEELGVRVLDAAQFTILV 735 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/664 (36%), Positives = 381/664 (57%), Gaps = 31/664 (4%) Query: 19 EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVP 78 +Y Y+ +D P + D EYD+L +L +L+ K+ + +SPT RVG L F + H Sbjct: 18 DYHYYTLDKPLVSDGEYDKLYNQLIKLQ-KNLAYVPENSPTNRVGGQILDKFEKHYHLTR 76 Query: 79 MLSLDNV--FDE-ESFLAFNKRVQD--------RLKNNEKVTWCCELKLDGLAVSILYEN 127 +LS D +DE + ++ KR+++ RL N E + E K DGL +++ YE+ Sbjct: 77 LLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLE---FVMEYKFDGLTINLTYED 133 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G+L +AATRG+G GE + + TIR+IP + +++ LE++GE +P + ++ N++ Sbjct: 134 GILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEKSL---LEIQGEALMPLSELDRYNKE 190 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFK 247 N RNAAAG++R LD + TAKR LT + Y V + + L+ Sbjct: 191 NETQ----LKNARNAAAGAIRNLDTKETAKRHLTAYFYAVPTNSINFKNEEEMLSFLKEM 246 Query: 248 KWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 K + P +VT S +E++ +++E+R TL DGVVIK+N QE LG + Sbjct: 247 KLNVHPYHKKVT---SLDEIINELERIKEERKTLDVLTDGVVIKINDKKTQEVLGVTEKF 303 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRW++AFKF +E T + DV + VGRTG +TP A LEPV +GV VS ATL+N D+IER Sbjct: 304 PRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRATLNNYDDIER 363 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 ++IG V IRR+ DVIP+++ VV +P T ++ PTHCP C S E ++ + C Sbjct: 364 KKVKIGSDVFIRRSNDVIPEILGVVDENQP-GTIKIEKPTHCPYCHS--ELIQEKVHIVC 420 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 + C Q ++H+ SR AMD++G+ +K I QL+E+ + D++ LT +L LE Sbjct: 421 PNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIYDIYDLTYDELIKLE 480 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 R G K A+N++ +++ +K F+YA+GI VGE TA LA F + + L A+++EL Sbjct: 481 RFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKFKSFDKLRNATVDEL 540 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLT 606 ++ D+G + ++ FF +++ I LL++G++ P ++ G V+T Sbjct: 541 IEIDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNPRENTSDS--KKLDGINFVIT 598 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 G++ +RDD K L + GA V GSVSK TD+V+AGE AGSK KA EL +E+ ++ ++ Sbjct: 599 GTIDGYNRDDIKKMLEDNGANVRGSVSKNTDIVLAGEKAGSKKDKAIELNVEIYEDEKLY 658 Query: 667 RLLG 670 L Sbjct: 659 SFLS 662 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 226/533 (42%), Positives = 321/533 (60%), Gaps = 17/533 (3%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 L H+ Y+V P I D EYD+L+++LR +E +HP + SPTQRVG +P+++F ++ Sbjct: 17 LSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSPTQRVGHSPISSFPKVV 76 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEK--VTWCCELKLDGLAVSILYENGVL 130 EVPMLSLDN +DE F++RV L +E V + E K+DG+ V + YE G Sbjct: 77 REVPMLSLDNTYDESELADFHQRVLRGLGLSGDEAGAVNYVVEPKIDGIGVELSYERGAF 136 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARR 190 TRGDG GEDI+ N+RT+R +PL+L E L VRGE F+ +A F +NE Sbjct: 137 RLGTTRGDGRVGEDISQNLRTLRGLPLRLREE---VDLIVRGEAFMTRADFTALNEARAE 193 Query: 191 TGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG 250 G + F NPRN AGSL+QLDPR+ A+RP+ Y V + G H L + ++ G Sbjct: 194 AGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEV--VGGERFAREHFEVLARLRELG 251 Query: 251 LPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 LP S+ + +S + E R L FD+DG+VIKVNS Q++ LG ++ PRWA Sbjct: 252 LPTSEHNSRADSWAALKREVAAWAERRAELPFDVDGLVIKVNSFDQRDALGTTSKFPRWA 311 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+KFPAQ+ T + D+E VGRTGA+TPVA L PV V+G V A+LHN D+IERLG+ Sbjct: 312 IAYKFPAQQVTTVIEDLEVNVGRTGAVTPVAMLTPVEVSGTTVQRASLHNWDQIERLGIG 371 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDVERVEGEAVARCTG 428 D+V++ +AG++IPQV+ VV E E VF P+ CP CG + + G C Sbjct: 372 PKDRVLLEKAGEIIPQVIAVV-----ERASEQVFPRPSTCPSCGHGLIQEPGRVALLCPN 426 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 L C Q SL+ F R M++DG+G+K+ L++ V ADLF L+ L LER Sbjct: 427 RLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLVSNVADLFALSKEDLLTLERF 486 Query: 489 GPKSAQNVVNALEKAKET-TFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 G +SAQN+V+A+ +A+++ TF+R L ALG+ +G A +AA++ ++AL A Sbjct: 487 GEQSAQNLVDAIARARDSATFSRLLAALGVAHIGGVAARAIAAHYPDMDALLA 539 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 6/126 (4%) Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV-INAEEIDSPFAGKTVV 604 L ++ VG ++AS + +F + R V+ L GV+ P + E + +GK +V Sbjct: 627 LGEIEGVGRIMASSLESFLRDPEAREVLRLLRERGVNPREPATEVTGEGV---LSGKRLV 683 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEA 663 +TG+LS+ R D K + G KV GSVSK+T ++AG GS KLA A++ G+ VIDEA Sbjct: 684 ITGTLSR-PRSDIKKAIEAAGGKVTGSVSKQTAYLVAGADTGSAKLASAEKYGVPVIDEA 742 Query: 664 EMLRLL 669 + LL Sbjct: 743 ALDALL 748 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 248/670 (37%), Positives = 367/670 (54%), Gaps = 12/670 (1%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +L ELR + H+ LY+ APEI DA+YD L REL LE +P+L +G Sbjct: 54 RLVELRAEIARHDDLYYRKAAPEISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDR 113 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 + RH PMLSL+ + EE+ L+F RV +L E++ E K+DG+A+S+LYE Sbjct: 114 SGVRGEFRHFAPMLSLEKAYTEEALLSFYDRVLSQL-TFEELDCLVEPKVDGMAISVLYE 172 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G V A +RG+G GED++ NV I +P +L E+ P R+E+RGEV++ GF ++NE Sbjct: 173 RGEFVRAVSRGNGRVGEDVSENVLRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNE 232 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GELPDTHLGRLLQ 245 G + FA+PR+ AAGSL+ DP + ++R L+ +G G E E P+T G Sbjct: 233 ARVAAGEEPFAHPRSLAAGSLKLDDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGL 292 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 + WG+PV + + E +LA ++EE R F +DG V+K++ Q +LG Sbjct: 293 AQSWGIPVLEELRKTRGTEALLAAVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTS 352 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KF + T + + QVGRTG +TPVA LE + + G + A+LHN IE Sbjct: 353 APRWAMAYKFAEKRVETRLLGIRIQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIE 412 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R+ LRIGD V + RAG+VIP VV V L++R + + VFP CP CG E EG Sbjct: 413 RMDLRIGDVVYLERAGEVIPNVVGVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERY 472 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C AQ + ++HF S RA+ ++G+G I L++ V T ADL+ L L Sbjct: 473 CRSS-TCPAQAQRKIEHFASSRAVGIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQA 531 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 A+ +V+ + ++ + R L+ LGI EVG + + LAA +G L A AS + Sbjct: 532 GVGSEAVARKLVSEISGSRAASLWRVLFGLGIPEVGVSRSKKLAAAYGDLAAFARASALD 591 Query: 546 LQ---KVPDVGI--VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 + +VG V V + + + NR +I L+ G+ + ++ E+ AG Sbjct: 592 FSPGGRAAEVGFGPVAREAVLAYLSLDENRELIGRLVELGLGARSEVMDTRSEV----AG 647 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 V TG+L +SR +A A + GA+ +VS D ++ G+ G+KL KA+ELG+EVI Sbjct: 648 TIFVFTGALEGLSRKEAMALVEAAGAETRSAVSSACDFLVVGKEPGAKLQKARELGVEVI 707 Query: 661 DEAEMLRLLG 670 + RLLG Sbjct: 708 GLEKFRRLLG 717 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 250/681 (36%), Positives = 382/681 (56%), Gaps = 41/681 (6%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA-PLA 68 EL + +H LY+ D EI D EYD+LM++L+ E +HP+ + PDSP+Q++G Sbjct: 8 ELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGTTKRE 67 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 A ++ H VPMLS+++VFD +S + + K+VQ+ + + E K+DGL++++ Y G Sbjct: 68 AGVKVEHNVPMLSIEDVFDFQSVIDWVKKVQEM---HPDAIFSVEQKIDGLSMTLRYRKG 124 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 L A TRGDG GED+T N R I +P KL + LE+RGEV++ + FE N Sbjct: 125 RLELAETRGDGHIGEDVTQNARAIPQVPDKLPITD--PYLELRGEVYMTRDRFEAYNARQ 182 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE--LPDTHLGRLLQF 246 + + ANPRN AAG+LRQLDP ITAKR L F + V + GE + L L + Sbjct: 183 EKDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNV---QDGEPHFMRSQLDNLDRL 239 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 GLPV+ ++A+EV+A ++ + R LG+DIDG V+K++ +A ++ A+ Sbjct: 240 SAMGLPVTYH-KRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVKIDQIAYRKDFPAGAKY 298 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE------PVHVAGVLVSNATLHN 360 +A+K+P +E++ + + VGRTG +T + P + G VS ATLHN Sbjct: 299 SAGHIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSRATLHN 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDVERV 418 D I ++ + IG + ++G++IP++ V + VF P CPVCG ++E+ Sbjct: 359 QDYIRQMKIGIGGHYKLFKSGEIIPKLNGCVKEPK------AVFKAPQFCPVCGEELEQE 412 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE-------YVHTP 471 EG A RC C AQ ++ +F R MD+ G+G ++D L +++ Y+ + Sbjct: 413 EGTADIRCVNP-SCPAQISRTIAYFAGRSCMDIAGLGQTLVDALCQEKITGSETFYLTSY 471 Query: 472 ADLFKLTAGKLTGLER--MGP-KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D+++L + + + R +G K+ ++ A+E +K R L LGIR VG +TAA L Sbjct: 472 VDIYRLREHRDSLISRGILGKEKNTDKILAAIEDSKSQRPTRLLAGLGIRNVGLSTAAAL 531 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 A + L L A E+LQ +PD+G A+ + +FFA E R ++++ A G+ P Sbjct: 532 MAVYPDLMDLMHAGFEDLQGIPDIGEKTAADIVHFFAHEDKRRMMADFRALGLTMRMP-- 589 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 EE AG T+V+TG L M R +AKA + + G K GSVS KTD ++AGEAAGSK Sbjct: 590 --EEEKTEALAGLTIVVTGKLPGMERSEAKALIEKNGGKCTGSVSGKTDYLLAGEAAGSK 647 Query: 649 LAKAQELGIEVIDEAEMLRLL 669 L KA+ LGI VIDE + L+ Sbjct: 648 LDKAKSLGIPVIDEEGLKALI 668 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/459 (46%), Positives = 281/459 (61%), Gaps = 4/459 (0%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 +L T + + Y+ +DAP DAEYD L EL++LE K P L+TPDSPTQ VG + + Sbjct: 39 DLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQTVGGSAVNT 98 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F+ + H +PMLSLD+VF E+ + R L N+ V E+K+DGLAVSILYENG+ Sbjct: 99 FAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQ-VEILAEVKVDGLAVSILYENGL 157 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 L AATRGDG GED+T+NV TI +P +L G + PA +EVRGE++ P A F NE Sbjct: 158 LTRAATRGDGRVGEDVTANVLTISNVPRQLTG-DFPASVEVRGEIYFPIADFLDFNEQRA 216 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE-LPDTHLGRLLQFKK 248 G K F N RNAAAGSLRQ DP TAKRPL C+G+G+ EGG+ PD+ Q K Sbjct: 217 LRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIYEGGQSQPDSQHAWYEQLKA 276 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 WGLPVS+ L + E+ + R L +IDG+V KV+S Q LG +RAPR Sbjct: 277 WGLPVSEYTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKVDSRQYQAALGTTSRAPR 336 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 WA A+KFP E T + D+ QVGRTG +TP +E V VAG VS+ATLHN DE++R G Sbjct: 337 WAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVLVAGSHVSSATLHNQDEVKRKG 396 Query: 369 LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVARCT 427 + IGD V++R+AGDVIP+++ V S R R V P+HCP CG+ + EG+ RC Sbjct: 397 VLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSHCPSCGAPLAPAKEGDVDLRCP 456 Query: 428 GGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 C AQ + + R A D++G+GD+ L + E Sbjct: 457 NQASCPAQITQRISFMGGRSAFDIEGLGDESALALTQPE 495 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 6/183 (3%) Query: 490 PKSAQN---VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 PK Q+ +++ LEKAK+ R L AL IR VG + LA +F +L+AL+ AS+ EL Sbjct: 618 PKPTQDLTKMLDQLEKAKQQPLWRVLNALSIRHVGPTASQALADHFRSLDALQQASVAEL 677 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLT 606 V VG ++A V +F + ++++++ A GV EE+ AG T+V++ Sbjct: 678 AAVEGVGQIIAEAVVAWFQVDWHKHIVNTWAASGVRMEDEAT---EELPQTLAGLTIVVS 734 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 G++ R+ AKA ++ GAK + SVSKKT LV+AG AGSK KA+ LG+ ++DE + Sbjct: 735 GTMPGYDRESAKAAIIARGAKASSSVSKKTSLVVAGPGAGSKATKAETLGVPLVDETKFQ 794 Query: 667 RLL 669 LL Sbjct: 795 LLL 797 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 245/664 (36%), Positives = 357/664 (53%), Gaps = 7/664 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR-VGA 64 ++L LR + H+ LY PEI DA+YD L +ELRELE++ + D R +G Sbjct: 45 RRLELLRVEIARHDDLYFRKAQPEISDADYDALKQELRELESRFGRRVPRDPAALRDMGD 104 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 ++ F + RH + MLSL+ E AF++ ++ +K ++ + E K DGLA+S Sbjct: 105 DRVSGFPKARHRMRMLSLEKTTTESGVRAFDQALRRLVKPPAEIAYVVEPKFDGLAISAT 164 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G LV TRG+G G+D+T+ IR +P +L G P +EVRGEVFL A FE+I Sbjct: 165 YEEGRLVRLVTRGNGEEGDDVTAAAGRIRTLPPRLAGAAWPRVVEVRGEVFLTFAEFERI 224 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N R G F++PRN A G+L+ L+P R L +G+G ++G P + L Sbjct: 225 NRGRRENGRPTFSSPRNLAVGTLKSLEPEDREVRQLDVVFFGLGAIDGHAAPASQTQLLE 284 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +WGLP + +S ++ ++ R L F IDG VIK++ Q G Sbjct: 285 WIAQWGLPSVEDARRVDSIDDAWRAVQELGGRRSHLAFPIDGAVIKLDDAVGQTAAGVSE 344 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 APRWA+AFK+ T VR V QVGRTG ITPVA LEPV +AG ++ ATLHNA E+ Sbjct: 345 VAPRWAIAFKYAPARVGTRVRGVALQVGRTGVITPVAELEPVALAGARITRATLHNASEM 404 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ER LR+GD V I R G++IP VV V ++R + VFP CP CG+ + R +A Sbjct: 405 ERSDLRVGDFVWIERMGEIIPAVVAVDTAQRGTVSAPFVFPRDCPGCGALLVRALDDANW 464 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RCT C A++ ++H+VS + + G+G ++ LV + V DL+ LTA ++T Sbjct: 465 RCTND-DCPARQVRKVEHYVSDEGVGIRGLGAASVEALVRSQRVREIPDLYTLTAAEVTA 523 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 R+ A VV+A++++++ R + LG+ +G A A L A F L AA Sbjct: 524 HTRLSAAQAARVVDAIQRSRKAPLRRVIAGLGLPGIGPAGANALGARFADLPQFAAARES 583 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +LQ+V + + + E + +++ L A GV +A AGK VV Sbjct: 584 DLQQVEGLRPESVRALATALSAERTQQLLARLAAAGVG-----AQSATADAGTLAGKEVV 638 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 TG+L +SR A + E G +VA V+ T ++AG SKL +A LG+ VI+EAE Sbjct: 639 FTGTLPTLSRRRATELVEEAGGRVADRVTAATWRLVAGRNPASKLHQATALGVPVIEEAE 698 Query: 665 MLRL 668 +LRL Sbjct: 699 LLRL 702 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 232/684 (33%), Positives = 374/684 (54%), Gaps = 37/684 (5%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PDS 57 E I ++ EL+ + + Y+ +DAP + DA YDR + +L++LE ++ + +S Sbjct: 5 EKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANS 64 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT----WCCE 113 PTQ++ A F ++ H+ PMLSL+ + EE +Q + N +KVT + E Sbjct: 65 PTQKINAKSSDLFKKVTHDSPMLSLNKAYTEE-------EIQKFIDNIKKVTPTFSFFLE 117 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGE 173 K+DGL++SI Y NG L A TRGDG GED+T N++ I+ IP ++ + LEVRGE Sbjct: 118 PKIDGLSISIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAYQ---KPLEVRGE 174 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG 233 V+L + FEKIN + ++ + ANPRNAAAG+LRQLD I A R L+ F Y + E Sbjct: 175 VYLALSEFEKINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPE-- 232 Query: 234 ELPDTHLGRLLQ----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 D ++ +L+ K G V+ T + E+ ++ + + TL ++ DGVVI Sbjct: 233 ---DHNIFTILEARDFLKNLGFSVTKEATYAKDLSEINSYIENFKHLKKTLDYETDGVVI 289 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 K+N L + LG + P A+AFK+ T ++++ VGRTG +T A LEPV ++ Sbjct: 290 KLNELQHYDALGATNKFPHSAIAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILS 349 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G ++ ATL+N I+ L L GD V I++AG++IP V+ +V +++ E+T F CP Sbjct: 350 GSCITFATLNNYQYIKDLKLNKGDLVYIKKAGEIIPCVIGLV-NKKHEETEFNKF-LKCP 407 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 C SD+ + C+ C R++ + HF S++AM+++ +G+K ID + + + Sbjct: 408 YCNSDLIETDTLLEQYCSNE-NCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLE 466 Query: 470 TPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 D +KL K+ LER G KS N++ ++E++K+ + R ++ L I+ +G A Sbjct: 467 NVIDFYKLKEKKDKIMSLERFGTKSVMNILKSIEESKKNSLDRVIFGLSIKHIGSKVAYF 526 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 LA+ L + L ++G + S + N+ A+E N+N++ +LL V Sbjct: 527 LASKILKLSNFLDFDFDSLISYNEIGEKIISSLKNWVAKEENKNLVKDLLDNDVDLEFIA 586 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 E FA + V+TG+LSQ R + + E G ++ +VS KT ++ GE AGS Sbjct: 587 TKKTER----FAQLSFVITGTLSQ-PRSHFEKLIKENGGSISSAVSAKTSYLLVGEDAGS 641 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 KLAKA+ L ++++DE LL S Sbjct: 642 KLAKARALNVKILDEEAFNELLVS 665 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 205/461 (44%), Positives = 279/461 (60%), Gaps = 6/461 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 E+ + +L + Y+ D+P + DA+YDR+ RE+ E+E ++P+L DSPT Sbjct: 9 FETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADSPTM 68 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG + + FS++RH M+SLD+VF E + R+ + ++ + E+K+DGL+ Sbjct: 69 SVGGSVDSGFSEVRHLAQMMSLDDVFSLEELAGWETRMAEATGISD-LEMTTEVKVDGLS 127 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LYENG LV AATRGDG GED+T+N RTI +IP L G +P R+EVRGEV+ P A Sbjct: 128 INLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSG-TVPTRIEVRGEVYFPVAD 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE---LPD 237 F NE G K F N RNAAAGSLRQ DP TAKRPL +G+G +E GE P Sbjct: 187 FAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGFVEAGEDFTEPI 246 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T +G Q + WGLPVS + + + ++ E R L +IDGVV+K+N L Q Sbjct: 247 TQMGWYEQLRDWGLPVSPYTRVLTGRKAIEERIAELGEKRHDLEHEIDGVVVKINDLDLQ 306 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG +R PRWA A+KFP +E T + D+ QVGRTG +TP +E V VAG V+ AT Sbjct: 307 RSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGVMESVLVAGSNVARAT 366 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD-VE 416 LHNA E+ R G+ IGD VV+R+AGDVIP++V V R R V PT CP CG+ V+ Sbjct: 367 LHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPFVMPTECPSCGTTLVQ 426 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 EG+ RC +C AQ E L H +R A+DV+G+GD+ Sbjct: 427 EKEGDVDLRCPNKGLCPAQITERLAHVGARSALDVEGLGDE 467 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 100/189 (52%), Gaps = 11/189 (5%) Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 +E K + ++ LEKAK AR L AL IR VG A LA F +++AL AAS+E Sbjct: 587 IEPTASKGTEKMLVELEKAKSQPLARVLVALSIRHVGPTAARALAEKFLSMDALRAASVE 646 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP----FAG 600 EL V VG + + ++F + + V+ W V A+E P AG Sbjct: 647 ELSAVEGVGEEIGRSLRDWFTVDWHLEVLQ-------AWARAGVRMADEAPEPTSDVLAG 699 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 TVV++G++ R+ AK + G K GSVSKKT LV+AG AGSK AKA+ LG+ VI Sbjct: 700 LTVVVSGAMPGYDREGAKEAITSRGGKAVGSVSKKTSLVVAGPGAGSKAAKAEALGVPVI 759 Query: 661 DEAEMLRLL 669 E + LL Sbjct: 760 TEQQFTDLL 768 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 282/801 (35%), Positives = 397/801 (49%), Gaps = 139/801 (17%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ ELR + + Y+ D+P + DAEYD + EL LE HP L TP+SPTQR Sbjct: 14 QAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAHPALATPESPTQR 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A + F+ + H MLSLDNVF + ++ RV L + V + E+K+DGLA+ Sbjct: 74 VGGAAASGFTTVEHVERMLSLDNVFSVDELRDWDARVARDLGAGD-VGYLAEVKIDGLAI 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++LYE+G L AATRGDG TGED+T N I +P +L GE PA +EVRGE+F+P A F Sbjct: 133 ALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEVRGEIFIPTASF 192 Query: 182 EKINE-----------DAR-RTGGK---------------VFANPRNAAAGSLRQ-LDPR 213 ++NE D R R G + FANPRNAAAG LRQ LD + Sbjct: 193 TRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAAAGGLRQQLDKK 252 Query: 214 ITAKR--------PLTFFCYGVGVLEGGELPDTHLGR----LLQFKKWGLPVSDRVTLCE 261 +R L + +G+G L+ LGR F WGLPVS + Sbjct: 253 DGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWGLPVSPHNRVVN 312 Query: 262 SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQM 321 + V+ R + ++DG+V+KV++L Q++LG +RAPRWA+A+K+P +E Sbjct: 313 GIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRWAIAYKYPPEEVN 372 Query: 322 TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAG 381 T + ++ VGRTG TP A +EPV VAG V ATLHN D + G+R+GD VV+R+AG Sbjct: 373 TRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGVRVGDVVVLRKAG 432 Query: 382 DVIPQVVNVVLSERPED--TREVVFPTHCPVCGSDVERV-EGEAVARCTGGLICGAQRKE 438 DVIP+++ V + + + V P CP CG+ + + EG+ RC C AQ + Sbjct: 433 DVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRCPNARSCPAQVRG 492 Query: 439 SLKHFVSRRAMDVDGMGDKIIDQLVE-----KEYVHTPADLFKLTAGKL----------- 482 ++H SR +DV+G+G+ L + + T A LF LT +L Sbjct: 493 RVEHIGSRGGLDVEGLGEVAAAALTQPLEPADPPLDTEAGLFSLTIEELLPIRVVVRDPE 552 Query: 483 TGLERM--------------GPKSAQNVVNALEKAKETTFARFLYAL--------GIRE- 519 TGL R G VV ++ E T+ + GIR+ Sbjct: 553 TGLPRPYDGVGESAELPTADGATFTAKVVRPFQRLVERTYPPGTETMTPAERRKAGIRKD 612 Query: 520 ---VGEATAAGLAAYFGTLEALEAASIEELQK------VPDVGIVVASHVHNFFAE-ESN 569 G A +A + L+ L+ A ++L + + VG V A + ++F ++ Sbjct: 613 HPVYGPAKSAQV-----LLDELDRAKTKDLWRQLVSLNIRHVGPVAARALADWFGSLDAI 667 Query: 570 RNVISELLA--EG--------------VHWPAPIVINAEEIDSPFA-------------- 599 R SE LA EG V W IV + FA Sbjct: 668 RAASSEELAAVEGVGPVIGAELQAWFDVDWHVDIVDSWTRAGVRFATPGHPGPEAMAAQA 727 Query: 600 -----------GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 G TVV+TGSL +RD AK ++ G K AGSVSKKTD V+ GE AGSK Sbjct: 728 AAGAAPQGPLAGLTVVVTGSLDGFTRDGAKEAIIAAGGKSAGSVSKKTDYVVVGENAGSK 787 Query: 649 LAKAQELGIEVIDEAEMLRLL 669 AKA+ELG+ V+DEA + LL Sbjct: 788 AAKAEELGLPVLDEAGFVALL 808 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/446 (45%), Positives = 283/446 (63%), Gaps = 10/446 (2%) Query: 106 EKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP 165 E++ W E K+DGLAVS+LYENGV ATRGDG G++IT N++T+R+IPL+LHG+ P Sbjct: 5 EQLEWLVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKGAP 64 Query: 166 ARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCY 225 LEVRGEV+LP AGF++I E+ G + FAN RN AAG+L+QLDP + AKRPL Y Sbjct: 65 EVLEVRGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIVLY 124 Query: 226 GVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 G+G + + P T L K +GL +C +AEEV+ +++ R GF+ D Sbjct: 125 GLGEISV-DPPPTQAALLEWMKAFGLRTPKFTRVCHTAEEVMKAIDELDSIRDGFGFETD 183 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 G VIK+NS+ Q+E++G+ +RAP+WA A+K+ +++ T + + QVGRTG +TPVA L P Sbjct: 184 GAVIKLNSIEQRERVGYHSRAPKWAKAWKYVSEQAETVLESITIQVGRTGVLTPVAELRP 243 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V + G +S ATLHN DEI+R +RIGD V+I +AG+VIP VV VVL +RP + FP Sbjct: 244 VFLRGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFPFP 303 Query: 406 THCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CPVC S +R AV C + C AQ L++F R A+D+DG+G + D+LVE+ Sbjct: 304 HECPVCHSQAKRDPNFAVWVCE-NVNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLVER 362 Query: 466 EYVHTPADLFKLTAGKLTGLER--------MGPKSAQNVVNALEKAKETTFARFLYALGI 517 V P DLF+L +L L G K+A V A+++AK AR+L+AL I Sbjct: 363 SLVRDPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHALAI 422 Query: 518 REVGEATAAGLAAYFGTLEALEAASI 543 EVGE TA LA + +LEA+ +++ Sbjct: 423 PEVGEETAHDLAKHHPSLEAVRDSAM 448 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 3/108 (2%) Query: 562 NFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARL 621 ++FA ES + L +H AP D FAGKT VLTG+L +M R+ A ++ Sbjct: 534 HWFAGESGHETLKRL--HHLHI-APKGATPGAGDQAFAGKTFVLTGTLEKMGRNAAAEKI 590 Query: 622 VELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 LG V+ SVS+KT V+AG AGSKL AQ LG+ V+ E + L++L Sbjct: 591 RALGGNVSSSVSRKTSYVVAGPGAGSKLEDAQSLGVTVLSEDQFLKML 638 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 238/688 (34%), Positives = 362/688 (52%), Gaps = 49/688 (7%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 IEQ++ +LR + H+ LY P I D+EYD++ EL LE KHPE +SPT+R+ Sbjct: 2 IEQKIKQLREEVMKHDLLYD-EGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIY 60 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + + + +I+H PMLS D EE + F + D + +K DGL + + Sbjct: 61 SVVVDSLKKIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGDKE--------DGLTIVL 112 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y NG+ A+TRGDG GED+T VRTI +P K+ + LEVR E +P + FE+ Sbjct: 113 KYNNGIYYEASTRGDGYIGEDVTHTVRTITNLPKKI---SFKGYLEVRAESVIPFSEFER 169 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLGR 242 IN D + + +PRN +GS+R L+ I +R L+ + + EG DT Sbjct: 170 INVDGK------YKSPRNLVSGSVRTLNANIAKERGLSIIAFDLVKAEGITFEKDTEQLE 223 Query: 243 LLQFKKWGL-PVSDRVTLCESAEEVLAF---YHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L+ + + + P E +E++ + Y+K E RPT+ IDG+V+K N+LA +E Sbjct: 224 FLKEQGFNVVPYKVFKNTPEGIKELIQYCLTYNK--EVRPTIPHMIDGLVLKFNNLAVRE 281 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG+ ++ PRW AFKF + + T + ++ VG++G ITP EPV + GV + A+L Sbjct: 282 SLGYTSKFPRWGFAFKFDSLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASL 341 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 N D I+ +RIGD +V+ RA DVIPQ+V+ V R +E++ PT CPVC +V + Sbjct: 342 ANYDNIKERDIRIGDTIVVARANDVIPQIVSAVTELRDGTEKEILPPTCCPVCKGEVVKE 401 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 E C C AQ++ LKHFVSR AM++DG+G K ++ EK + + +D++ L Sbjct: 402 EDNVHYFCINS-TCSAQQERILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLK 460 Query: 479 AG--KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 KL+ L G K Q +++ +E++K ++FLYAL I VG +T +A F T+ Sbjct: 461 DNLDKLSVLRGFGEKKIQKMLSGIEESKHVPLSKFLYALAIPNVGSSTGKDIAKKFKTMR 520 Query: 537 ALEAASIE------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 L S + EL K+ +G VAS + ++F E N +I L + G + + Sbjct: 521 HLIELSKDPVVLKTELMKIDGIGETVASSMVSYFEESHNIELIEFLYSIG--FTMMEEVE 578 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG-------- 642 GK V+TGSLS+ R+D K + G KV+GSVS KT+ ++ G Sbjct: 579 EIIASEEIEGKIFVITGSLSK-PRNDIKKEIEARGGKVSGSVSAKTNFLVLGGYNHVTGE 637 Query: 643 ----EAAGSKLAKAQELGIEVIDEAEML 666 E SK A + +I E E+ Sbjct: 638 LPEKETNSSKYKNAVKFECPIISEEELF 665 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 246/689 (35%), Positives = 363/689 (52%), Gaps = 65/689 (9%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+ + D YDRL+R ++ E +HP+ + P SPT +V A + H VPMLS Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKVAGG--AVVGDVPHTVPMLS 87 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTT 141 LDNVF + ++ RL W E KLDGLA++ Y G LV TRGDGT Sbjct: 88 LDNVFGAGQLADWAASLERRL-GRPVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGTA 146 Query: 142 GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRN 201 GED++ + TI +P +L P +E+RGEV + + FE + G FANPR+ Sbjct: 147 GEDVSHAIGTIVGLPARLAE---PVTVELRGEVMMTASQFEDACVKRQAHDGTTFANPRS 203 Query: 202 AAAGSLRQLDPRITAKRP----LTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRV 257 AAAG+LR D RP LTFF YG PD + +Q ++ LP S+ + Sbjct: 204 AAAGTLRAQD------RPYVCELTFFGYGAL-----PYPDDTSEQAVQLRE--LPHSEVM 250 Query: 258 T------------------LCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 T + + E++ ++ R L F IDG+VIK + A Q Q Sbjct: 251 TWVAGQGVQTPAVTDVGGIVATTLEQIQERVEQIAAKRTELPFGIDGIVIKCDLAADQAQ 310 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 GF +RAPRWA+A+K PA E++T + VE+ GR+G I P A LEPV + G +V+ ATLH Sbjct: 311 AGFSSRAPRWAIAYKLPATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLH 370 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +I R GL +GD VV+ +AGDVIP+V V+ R D + + P CP CG ++ Sbjct: 371 NVADITRRGLMLGDSVVVYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCPTCGDAID--A 428 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 + RC G C + S+ + R +D++G+ + I QL++ + ADLF LT Sbjct: 429 SQERWRCVRGRAC--RVIASIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTR 486 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 ++ GLERMG S N++ A+E+AK +R ALG+R G + + +A +FG+++A+ Sbjct: 487 EQVLGLERMGATSTDNLLAAIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIR 546 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH-----WPAPIVINAE-E 593 AA E ++ V +G A V E + ++I +L+ GV W P A+ + Sbjct: 547 AADAEAIEAVEGIGPKKAPGVVAELVELA--DLIDKLVKAGVTMTEPGWTPPAEPGADAQ 604 Query: 594 IDS--------PFAGKTVVLTGSLS----QMSRDDAKARLVELGAKVAGSVSKKTDLVIA 641 D P AG +VV+TG++S ++R++ + G K + SVS KT L++A Sbjct: 605 ADPEAGGTSGLPLAGMSVVVTGAMSGALEALTRNEMNELIERAGGKASSSVSAKTSLLVA 664 Query: 642 GEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 GE AGSK AKA+ LG+ ++ E L+G Sbjct: 665 GEKAGSKRAKAESLGVRIVGPEEFAGLVG 693 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 222/715 (31%), Positives = 377/715 (52%), Gaps = 65/715 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ESI++ + +L L E+ Y+V+ P + D YD R L E K+P+ + SPTQR Sbjct: 9 ESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG++ F +++H+ MLSL N F+ E L FN+ + ++ E + E K+DGL++ Sbjct: 69 VGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIA-KISKQEDNPYVLEPKIDGLSI 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y +GVL A TRGDG GE + +N++TI+ IPLK++ ++ +RGEV++ F Sbjct: 128 SLIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINT--TIKKIVIRGEVYVSNQDF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLT-FFCYGVGVLEGGELPDTHL 240 E IN A R K FAN RN A+GSLR +D AKR L FF Y E G +T Sbjct: 186 EAIN--ASRDEDKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYELG--FETQY 241 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + Q K+WG V+ + L + +E+ ++E ++ L + IDG VIK N+ E + Sbjct: 242 QVIQQLKEWGFNVAKEIKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEII 301 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++ P+WA+A+KF + T ++D+ VGRTG +T VA+L P+ + G +++ ATLHN Sbjct: 302 GYTSKFPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHN 361 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 + I L +RI D V + +A ++IP+V+ V L +RP + +++ F +CP C + + Sbjct: 362 LEYINDLDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPE 421 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK--------------------IID 460 E C C ++ + L ++ S+ M+++G+ + I + Sbjct: 422 EVDWYCIYDQ-CKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITN 480 Query: 461 QLV-------------EKEYVHTPADLFKL----------------TAGKLTGLERMGPK 491 Q V E+ +V++ D+++L + L R K Sbjct: 481 QNVSEDLSLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEK 540 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 S ++N++ ++K R L AL I+ +G ATA +A + ++ L+ ++E+ ++ D Sbjct: 541 SFDKLINSINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLAD 600 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP--FAGKTVVLTGSL 609 + + A+ + +FF++E N +I +L ++ IN + +DS + K V+TGS Sbjct: 601 ISSITANSLFSFFSDEKNWELIEQLKTLSINTKDE--INNDLVDSSSIYYDKKFVITGSF 658 Query: 610 SQMSRDDAKARL-VELGAKVAGSVSKKTDLVIAGEA-AGSKLAKAQELGIEVIDE 662 S +SR+D +L ++ K VSK D V+AG + K+ +A+ L I +I E Sbjct: 659 S-ISRNDIIKKLSLKYKIKFVSGVSKNVDFVLAGNSPTAKKINQAKVLNIPIIQE 712 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 210/462 (45%), Positives = 279/462 (60%), Gaps = 9/462 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + + T L +R ++ Y+V DAP DA YD MREL LE +HP L TPDSPTQ+VG Sbjct: 17 VRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPGLRTPDSPTQQVG 76 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F+ + H MLSLDN F E +A+ +RVQ L++ V + CELK+DGLA+++ Sbjct: 77 GTFSTEFTAVDHVERMLSLDNAFSREDLVAWAERVQRDLESTVPVEYLCELKIDGLAIAL 136 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQAGF 181 LYE G LV AATRGDG TGED+T NVRTI IP L G+ P +E+RGEVFLP F Sbjct: 137 LYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRGEVFLPVDAF 196 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE G FANPRNAAAGSLRQ DPR+TA RPL + +G+G L G+ T + Sbjct: 197 RALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTWGDGRGTGID 256 Query: 242 RLLQ----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 R Q WG+P S + S +EV E R + +IDGVV+KV+ +A Q Sbjct: 257 RQSQVYDLLAGWGVPTSTHTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVVVKVDDIALQ 316 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG +RAPRWA+A+K+P +E T + +E +GRTG TP A +EPV VAG V AT Sbjct: 317 RRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLVAGSTVRQAT 376 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDV 415 LHN D ++ G+R+GD VV+R+AGDVIP++V +D V + P CP CG+ + Sbjct: 377 LHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPADCPECGTPL 436 Query: 416 ERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 + EG+ RC C AQ + L+H SR A D++ +G+ Sbjct: 437 RPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGE 478 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 49/223 (21%) Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA-------ASI 543 ++A+ +++ L+ AK R + AL IR VG A LA FG++ AL A ++ Sbjct: 584 EAARTLLDQLDLAKTKELWRAIVALSIRHVGPTAARALAQEFGSMAALRAVVDPTARGAV 643 Query: 544 EELQKVPD-----------------------------------VGIVVASHVHNFFAEES 568 + Q+ D VG +A + ++FAE Sbjct: 644 DAPQEAVDGGAVADDAVEGSIADEDGAPAADAAAVARLAGVEGVGPTIARSLLDWFAEPW 703 Query: 569 NRNVISELLAEGVHWPAPIVINAEEIDSP--FAGKTVVLTGSLSQMSRDDAKARLVELGA 626 +R ++ A GV ++ +A + +P G TVV+TGSL + SRD AK ++ G Sbjct: 704 HREIVDRWAAAGV-----VMQDAVDESTPRTLEGVTVVVTGSLERFSRDGAKEAILGRGG 758 Query: 627 KVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 K +GSVS+KTD V+ GE AGSK KA+ELG+ ++DEA LL Sbjct: 759 KASGSVSRKTDFVVVGENAGSKETKARELGLRILDEAGFEALL 801 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/452 (44%), Positives = 279/452 (61%), Gaps = 16/452 (3%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+V DAP DA YD M L+ LE++ P+L TP SPT RVG F+ +RH M+S Sbjct: 66 YYVKDAPLSSDAAYDARMNCLKRLESEFPQLDTPQSPTHRVGGTFSNDFTAVRHPSQMMS 125 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLAVSILYENGVLVSAATRGDG 139 LD+VF E A+ V+ L+ E + CE+K+DGLA++++Y NGVL TRGDG Sbjct: 126 LDDVFSFEELRAWYDGVRKDLEWPEDKLLPMTCEVKIDGLALNLIYRNGVLTQGLTRGDG 185 Query: 140 TTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 TGEDIT NVRTI +IP L G +IP +E+RGEVF+ F K+NE G FA Sbjct: 186 VTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRGEVFMRWDDFHKLNEANEDAGRPPFA 245 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-----ELPD---THLGRLLQFKKW 249 NPRNAAAGSLRQ DPRITA+R L+F+ +G+G L G ++ D ++KW Sbjct: 246 NPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVWGSGKPVDVADEVRNQSDAYTMYRKW 305 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G+P+S +++L E R + +DG+V+KV+ LA Q +LG +RAPRW Sbjct: 306 GVPISPHNREVTDFDQILDMIEYYGEHRGDIEHALDGIVVKVDDLALQRRLGSTSRAPRW 365 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+K+P +E T + ++ QVGRTG +TPVA L PV+VAG VS TLHNA E++R G+ Sbjct: 366 AIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAILNPVYVAGSTVSRTTLHNAYEVKRKGI 425 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSER---PEDTREVVFPTHCPVCGSDVE-RVEGEAVAR 425 IGD VV+R+AGDVIP++V V+++R +D RE V PT CP C + + EG+ R Sbjct: 426 LIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLREFVMPTRCPSCDTVLRYEKEGDKDLR 485 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 C C AQ E + + +R+A D++ +GD+ Sbjct: 486 CPNSESCPAQLAERVINLAARKAFDIEHLGDQ 517 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 9/186 (4%) Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 ++ + +++ +EKAK T +R L AL IR VG TA LA +F TL+AL AS EEL+++ Sbjct: 678 ENTRKMLDEIEKAKHTDLSRVLVALSIRHVGPPTAFTLAKHFKTLDALADASAEELEQID 737 Query: 551 DVGIVVASHVHNFFAE-----ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 +G +A + FF E V+ A GV + + E + GK+VV+ Sbjct: 738 GIGAEIADSIATFFEEARMPGNWRGRVLEAWKAAGVG----MSTHDEGLPQTLEGKSVVV 793 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L SR+ AK + G K +GSVS+KTD V+ G GSK KA+ELGI +IDE + Sbjct: 794 TGTLEHFSRESAKEAIERRGGKASGSVSRKTDWVVVGANPGSKATKAEELGIPIIDEQQF 853 Query: 666 LRLLGS 671 LL + Sbjct: 854 DTLLAT 859 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 238/678 (35%), Positives = 372/678 (54%), Gaps = 40/678 (5%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + +L +RHH+YLY+V + PEI D ++D+L + LR+LE + P+ +SPT VG+ Sbjct: 21 IAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEFPQFKDLNSPTLVVGSDLD 80 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAF-NKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 F + +H++P+LSL N ++++ L + NK D L + E K+DG ++ + YE Sbjct: 81 KDFEKFQHKLPVLSLINTYNDDELLDWVNKTDPDGL-------YSVEWKIDGASIVLYYE 133 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 NG+L + TRG G G+D+T N+RT+R IPL+L P + +RGEVF+ FE+ NE Sbjct: 134 NGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPE---PITVYLRGEVFMTFKDFEEFNE 190 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + GK +ANPRN +AGS++Q + TAKRPL F Y + TH L + Sbjct: 191 ---LSSGK-YANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQILSKL 246 Query: 247 KKWGLPVS-DRVTLCES--AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 +K PV D V + S AE + F K + TLGF DG+VIK+N +++++ G+ Sbjct: 247 EKLTFPVPPDTVFVNGSKIAETIKDFKKK----KDTLGFPTDGLVIKLNDISKRDAQGYT 302 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 + +PRWA A+KF A + + + D+ + VGRTG ITP +EPV++AG V+ ATLHN D Sbjct: 303 SHSPRWARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQDY 362 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I+ LG+ IG V + + G++IP V V+ + D ++ P +CP C + + E Sbjct: 363 IDELGVGIGAIVRVAKRGEIIPAVEEVITPGK--DVFKI--PDYCPSCKTKTIKKENLVD 418 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGK 481 C C + K + + R+ MD++G+GDK I+ L + Y+ + ADL+ L K Sbjct: 419 LFCPNP-DCPDRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQKEK 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLE---- 536 L E G KS + N +E +K+ F L ++G+ E+G L + +++ Sbjct: 478 LIEEEGFGEKSLAIIFNGIEHSKQKDFRFLLPSIGLPELGHKVTELLIEHGIDSIDEILS 537 Query: 537 -ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINAEEI 594 A + I L ++P +G F+++ +I+ L G+ A PI ++ ++ Sbjct: 538 IAKDKKRISSLLEIPGIGPSTIKAFEENFSDKRILKLIARLKNAGLKLKADPIKVSDQQ- 596 Query: 595 DSPFAGKTVVLTGSLSQMS-RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 PFAG++ +TGS RD A +V G + +VS KT ++AG AGSKL KA Sbjct: 597 --PFAGQSWCVTGSFENFQPRDKAMDLVVYYGGRKVSAVSSKTTHLLAGPGAGSKLEKAN 654 Query: 654 ELGIEVIDEAEMLRLLGS 671 ELGI V +E + L LL S Sbjct: 655 ELGIVVYNEKQFLDLLKS 672 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 203/452 (44%), Positives = 271/452 (59%), Gaps = 16/452 (3%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y++ DAP DA YD +R L+ LE + P L +P SPT RVG F+ +RH M+S Sbjct: 89 YYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSPQSPTHRVGGTFSNDFASVRHPSRMMS 148 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLAVSILYENGVLVSAATRGDG 139 LD+VF E + V L E + CE+K+DGLA++++Y NGVL TRGDG Sbjct: 149 LDDVFSIEELREWYDGVLRGLDWPESKPLPMTCEVKIDGLALNLIYRNGVLEQGLTRGDG 208 Query: 140 TTGEDITSNVRTIRAIPLKLHG--ENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 TGEDIT NVRTI IP L G E+IP +E+RGEVF+ F K+N + G FA Sbjct: 209 VTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRGEVFMRWDDFNKLNAENEDAGRAPFA 268 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG--------ELPDTHLGRLLQFKKW 249 NPRNAAAGSLRQ DPRITA R L+F+ +G+G L G ++ + +KKW Sbjct: 269 NPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRWGAGHAGNGHDVVNDQSEAYELYKKW 328 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G+PVS S +E+L E R + +DG+V+KV+ L Q LG +RAPRW Sbjct: 329 GVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHALDGIVVKVDDLGLQRSLGATSRAPRW 388 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+K+P +E T + D+ QVGRTG +TPVA L+PV+VAG VS TLHN E+ER G+ Sbjct: 389 AIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLKPVYVAGSTVSRTTLHNPFEVERKGV 448 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERP---EDTREVVFPTHCPVCGSDVERV-EGEAVAR 425 IGD VV+R+AGDVIP++V VL R + R V PT CP CG+++ EG+ R Sbjct: 449 LIGDTVVVRKAGDVIPELVGPVLERRKGREGELRRFVMPTRCPSCGAELAPAKEGDKDIR 508 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 C C AQ E + + SR+A D++ +GD+ Sbjct: 509 CPNVESCPAQLTERIINLASRKAFDIEHLGDQ 540 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/227 (38%), Positives = 126/227 (55%), Gaps = 21/227 (9%) Query: 459 IDQLVEKEYVHTPADL------FKLTAGKLTGLERMGPKSAQN---VVNALEKAKETTFA 509 ID+ E P D K++ G + ++ + + A+N +++ ++KA+ Sbjct: 665 IDETAEYPQYVVPDDAVVIREEIKVSRGGTSSVQPVYIRPAENTRKMLDEMDKARHADLW 724 Query: 510 RFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFA---E 566 R L AL IR +G TA +A+ FGTL+A+E AS++EL ++ +G +A V +F E Sbjct: 725 RVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDGIGSEIAESVVTWFTAARE 784 Query: 567 ESNRN--VISELLAEGVHWPAPIVINAEEIDSP--FAGKTVVLTGSLSQMSRDDAKARLV 622 N V+ A GV V A+ P AGKTVV+TGSL SRD AK +V Sbjct: 785 PGNWRGAVLDAWKAAGVG-----VGQAQASGLPQTLAGKTVVVTGSLEGFSRDSAKEAIV 839 Query: 623 ELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 G K AGSVSKKTD V+ GE AGSK AKA+ELGI +++E + +LL Sbjct: 840 LRGGKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLNEDQFKQLL 886 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 364 bits (935), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 277/805 (34%), Positives = 381/805 (47%), Gaps = 147/805 (18%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + + L + + YH P DA YD L LE HP +I DSP VG Sbjct: 82 VPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALHPAMIREDSPIGAVG 141 Query: 64 AAPLA--AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--------VTWCCE 113 A P A A Q+ H VPM SL N FD++ AF RV L E+ + +C E Sbjct: 142 AKPAAWSALPQVEHAVPMRSLGNCFDDDDVRAFVARVTRALGPPERFDDDARAPLRFCAE 201 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVR 171 K+DG + S+ Y +GVLV AA+RGDG GED+T + I P L G + PA LE+R Sbjct: 202 PKIDGASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTLTGRAGDWPATLEIR 261 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPR----ITAKRPLTFFCYGV 227 GEVF+ F +N G F + RNAAAG++R+L+P A R L F YG Sbjct: 262 GEVFIADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDGADAGRYLRFLAYGW 321 Query: 228 GVLEGGELPDTHL-------GRLLQFKKWGL-PVSDRVTLCESAEEVLAFYHK-VEEDRP 278 G ++ P T L L GL PV + + ++A H +E DR Sbjct: 322 GEVK----PQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAGSHAALERDRA 377 Query: 279 TLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAIT 338 +LG+ +DGVV KV+ +A Q LG +RAPRWA A KF A+ +T +R V+ QVGRTGA+T Sbjct: 378 SLGYRVDGVVYKVDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVDVQVGRTGALT 437 Query: 339 PVARLE-PVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE 397 PVA L+ PV + G V+ ATLHN +++ R GLR+G +VV+ RAGDVIP+VV VV +E E Sbjct: 438 PVATLDPPVALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRVVRVV-AEGEE 496 Query: 398 DTREVVFPTHCPVCGSDVERV--------------------------------EGE---- 421 + V PT CP CGS V + E E Sbjct: 497 EGAVVATPTRCPACGSAVSKTPLAASVKCPKKRLSSPYESGDAASSSFAAVDDESEDATS 556 Query: 422 ---------AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 AV RCTGG C AQ E + HF SR A+DV G+ K I L++ + +PA Sbjct: 557 SPSSSSSSAAVLRCTGGWRCPAQALERVAHFASRDALDVRGLARKQIADLLDAGVIASPA 616 Query: 473 DLFKLTA-----------------------------------GKLTGLERMGPKSAQNVV 497 DLF + A GK G + +SA+ + Sbjct: 617 DLFTMRARFEHLGVDPDASGEDDDARGDGGGVAVPEFWTYASGKDEGKLK---RSAKKLF 673 Query: 498 NAL-EKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE----------- 545 +AL E A RF+Y+LGI +VG TA L+ + TL+A A+ E Sbjct: 674 DALDETAAGVPLHRFIYSLGIPQVGLTTAKLLSRKYRTLDAFRDAAEEAAAAKAAASADA 733 Query: 546 --------LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV------------HWPA 585 + + +G VVA+ + F++E +N NV+ ++L GV Sbjct: 734 AASTEAPAMTDIDGIGPVVAATIGEFWSERANVNVVDDMLRNGVVVSDDASPPDASDASD 793 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 A P G VV+TG++ M+R++A + G +VS KT +++ GE A Sbjct: 794 ASNAAAASATGPLTGYAVVVTGAVPGMTREEAFDAVAAAGGSPQKAVSGKTHVLVVGEGA 853 Query: 646 GSKLAKAQEL-GIEVIDEAEMLRLL 669 G + A+A E G+ VID LR+L Sbjct: 854 GRRKAEAAEARGVAVIDAEAFLRVL 878 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 200/468 (42%), Positives = 277/468 (59%), Gaps = 15/468 (3%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ E+ + + YH D P + D YDRL+RELR LE +HPEL SP Q VGA Sbjct: 16 ERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSVGAP 75 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWC-CELKLDGLAVSIL 124 A F + H + SL +VF + ++ + C E+K+DGLAV++ Sbjct: 76 AAAGFENVAHLERLYSLQDVFTLDDL-------KEWYEGTAGAARCTAEVKIDGLAVNLR 128 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV ATRGDG TGED+T+NVRTI ++P L G + P +E+RGEVF+P A F+ Sbjct: 129 YVGGELVVGATRGDGVTGEDVTANVRTISSVPQSLRG-DFPDVVEIRGEVFIPLAKFDSF 187 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-----GELPDTH 239 N R G K FANPRNAAAGSLRQ DP++ A+RPL F +G G ++G E + Sbjct: 188 NARQRAAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRIDGTSSAVDEKLASQ 247 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 G F++WG+PVS V L S ++V F + + R L IDG V K++S A+QE Sbjct: 248 KGLYELFQEWGVPVSPYVRLVSSWDDVEGFVREYADLRSDLIHGIDGAVFKIDSRAEQED 307 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +R PRWAVA+K+P +E T + D++ QVGRTG +TP A ++PV VAG V+ ATLH Sbjct: 308 LGATSRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKPVTVAGSTVAQATLH 367 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV- 418 N E+ R G+ IGD VV+R+AGDVIP+V+ V + R RE P+ CP CG+++ Sbjct: 368 NPSEVARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMPSACPSCGTELAPAK 427 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 +G+ RC C AQ E + + SR A+DV+ +G++ L + E Sbjct: 428 DGDVDIRCPNARSCPAQLAERVAYIGSRAALDVEALGEETSLWLTDPE 475 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 1/174 (0%) Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 VV L+ A+ R + AL IR VG A +A+ FG+L A AS+EE+ ++ VG V Sbjct: 615 VVAELQAARTKELWRKIVALSIRHVGPTAAKAIASSFGSLSAAREASVEEMAQIDGVGRV 674 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRD 615 +A ++F + ++ A GV + A +E+ G TVV TG+L+ +RD Sbjct: 675 IAQSFLDWFDVPWHTEIVEAWEAAGVVF-ADEAAERQELPQTLKGMTVVATGALAGYTRD 733 Query: 616 DAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 K + G K AGSVSKKT V+ G GSK AKA+ LG+ +DE + LL Sbjct: 734 SVKEAIEARGGKAAGSVSKKTAAVVVGANPGSKAAKAEALGVPTLDEGQFEELL 787 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 247/678 (36%), Positives = 351/678 (51%), Gaps = 52/678 (7%) Query: 32 DAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESF 91 D YDRL R + E HPE + DSPT +V AA + H VPMLSLDNVF E F Sbjct: 48 DDAYDRLARGIAAYEADHPEEVLADSPTGKVAGG--AAVGDVPHTVPMLSLDNVFSAEQF 105 Query: 92 LAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRT 151 + + ++ R+ W E KLDGLAV+ Y +G TRGDGT GED++ Sbjct: 106 VTWTASLERRI-GRPVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDVSHAAGA 164 Query: 152 IRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLD 211 + +P +L P +EVRGE+ + F + N GG FANPRN AAG+LR D Sbjct: 165 VVGLPERLAE---PVTIEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAGTLRAKD 221 Query: 212 PRITAKRPLTFFCYGVGVL-EGGELPDT-----HLGRLLQFKKWGLPVSDRVTLC----E 261 + TFF YG L + GEL + H L G+ + + Sbjct: 222 RAYRVE--TTFFAYGALPLPDSGELGEALAELPHSEVLAYVAGLGVHTAAGTAVAPLRAT 279 Query: 262 SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQM 321 + EEV A + R L F IDG+VIK + A Q++ G RAPRWAVA+K PA E++ Sbjct: 280 TVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKLPAVEKI 339 Query: 322 TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAG 381 T + VE+ VGRTG I P A LEPV + G V ATLHN +I R LR+GD+V++ +AG Sbjct: 340 TRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQVMVYKAG 399 Query: 382 DVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLK 441 D+IP++ V+ R D + FP CP CGS+++ E RCT G C + S+ Sbjct: 400 DIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEID--ASEQRWRCTRGRDC--RLVASVS 455 Query: 442 HFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALE 501 + R +D++G+G + QLV+ V ADLF L +L L+RMG S N++ A+E Sbjct: 456 YAAGRDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDNLLAAIE 515 Query: 502 KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVH 561 A+ +R ALG+R G + + +A +F T++ + AA E LQ+V +G A+ V Sbjct: 516 TARTRPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKEKAAAVV 575 Query: 562 NFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS------------------------P 597 E + +I +L+A GV P + + P Sbjct: 576 AELVELA--PLIGKLVAAGVSMTEPGATPPPDPGTEEAAAPATADAGAPGGDAATGSALP 633 Query: 598 FAGKTVVLTGSLS----QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 AG TVV+TG++S ++SR+ + G K + SVS++T L++AGE AGSK AKA+ Sbjct: 634 LAGMTVVVTGAMSGALEKLSRNQMNELIERAGGKSSSSVSRRTTLLVAGEKAGSKRAKAE 693 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LG+ + E L+G+ Sbjct: 694 DLGVRIAVPEEFAELVGA 711 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 270/753 (35%), Positives = 382/753 (50%), Gaps = 105/753 (13%) Query: 18 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA--FSQIRH 75 H+ Y+ P I D+EYD + + HP RVGA P A +I H Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYDAIAAAHPTAAKAGGARARVGATPDGASGLEKIAH 61 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-------KVTWCCELKLDGLAVSILYENG 128 VPM SL N FD AF KRV+ E + +C E K+DG + S+ YENG Sbjct: 62 AVPMRSLGNAFDVGQVEAFMKRVEKLRGETEGEAATTTAIEYCAEPKVDGASASLRYENG 121 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 LV A +RGDG GED+T ++ R +P+KL E PA LE+RGEV + F+++N + Sbjct: 122 ELVYAVSRGDGEMGEDVTRHLIGARGVPMKL-AEPYPAVLEIRGEVHVADEDFQRVNAER 180 Query: 189 RRTGGKVFANPRNAAAGSLRQL---DPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 TG +VF N RNAAAG++R L D ++ PL F YG G + G +T+ Q Sbjct: 181 AATGLRVFKNARNAAAGAMRTLVVDDNQM----PLRFLAYGWGAV-GASNEETNAPWRTQ 235 Query: 246 --FKKWGLPVS--DRVTLCESAE---EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 F LP D V A+ E++ Y +E RPT+ ++IDGVV KVNS+ Q Sbjct: 236 SEFLSAFLPAQGFDAVPFLGVAKTIGELIEAYDALEIARPTMPYEIDGVVYKVNSVELQT 295 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG AR PRWA+A KF A +T +R +E QVGRTGA+TPVA L+PV + G +S ATL Sbjct: 296 ALGADARQPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALTPVALLDPVDIGGASISRATL 355 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV------LSERPEDTR---EVVFPTHCP 409 HN DEI R L++G +V + RAGDVIP+VV++ S ED + E + P+ CP Sbjct: 356 HNFDEIARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEASAYAEDIKPLPEWLPPSKCP 415 Query: 410 VCGSDVERVEGEA-------VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQL 462 CGS V R A + RCTGGL C +Q E L HF +R A+D+ G+ ++ L Sbjct: 416 DCGSSVVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLHFCARDALDIRGLARGTLETL 475 Query: 463 VEKEYVHTPADLFKL-------------TAGKLTGLERMG----------PKSAQNVVNA 499 + V TPAD+F L T + G++ +SA + A Sbjct: 476 HREGVVKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSKGEIKHGSDGLKQSAVKLFQA 535 Query: 500 LE-KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA----------ASIEE--L 546 +E + + RF+YALGI +G TA LA ++G+L A + AS+ L Sbjct: 536 IEVRRQGVPLHRFIYALGIPNIGAHTAKVLATHYGSLAAFKKAALAAAKGGPASLAHAAL 595 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV-----------HWPAP--------- 586 V VG V+A + +F+ E N ++ E++A GV + P+P Sbjct: 596 THVDGVGPVLAQSLVDFWGEPGNAFIVDEIIATGVVVLDADASSSKNQPSPRFAEPASSS 655 Query: 587 -------IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLV 639 + + E + G ++ TG++ SRDD + G VA ++S+KT LV Sbjct: 656 SVSPTPSPTVPSPEPTADLRGMKILFTGTIDGFSRDDVHDLIRAAGGDVASTLSRKTALV 715 Query: 640 IAGEAAG-SKLAKAQELGIEVIDEAEMLRLLGS 671 +AG AG SKLAKA++L + ++D + + L S Sbjct: 716 VAGVGAGPSKLAKARDLAVPIVDASRFVSALTS 748 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 228/673 (33%), Positives = 373/673 (55%), Gaps = 26/673 (3%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I++++ EL L Y+ + P + D EYD+ ++EL +LE K+P+ I +SPTQ++G Sbjct: 10 IKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNSPTQKLG 69 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + F ++ H+ PMLSL +D + ++ +L E + + E K+DGL++S+ Sbjct: 70 SFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIE-KLVPIEDINFSIEPKIDGLSISL 128 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y +G L A TRGDG GED+T N+ I +IP + N A LEVRGEVFLP+A F++ Sbjct: 129 HYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKII---NYDAELEVRGEVFLPKAEFQR 185 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE+ + G K F+NPRNAA+G+LRQLDP I R L F Y + + + T L Sbjct: 186 LNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVEPQKHNIT-TQEQAL 244 Query: 244 LQFKKWGLPVS--DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 F+K +P + +V E EE ++F+ E + L +D DG+VIK+N+L ++G Sbjct: 245 EFFQKLNIPTNPYHKVVEVEELEEAISFF---AEMKNKLNYDADGLVIKLNNLTYWNKMG 301 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A+ P+ ++AFK+ + ++ ++D++ VGRTG IT VA LEPV + +V ATLHN Sbjct: 302 KTAKFPKHSIAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQTIVRAATLHNY 361 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT-HCPVCGSDVERVEG 420 + IE L + I D+V I +AG++IP+V+ +V + ++ V T CP CGS + +E Sbjct: 362 NFIEDLNININDQVQIVKAGEIIPKVLALV----KKQSKGVFGKTLECPSCGSVLVEIED 417 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C C ++ HF SR+++++ G+G + + V + D+F L Sbjct: 418 NVDQFCVNK-NCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIFNLHKH 476 Query: 481 K--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 K L LER N++ + KAK++TF++ L+ALGI+ VGE A ++ + + L Sbjct: 477 KDELLKLERYAELKVNNLLTNIGKAKDSTFSKVLFALGIKHVGERAAKLISKQYHNFDEL 536 Query: 539 --EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 E + ++ + ++G + + + E N ++ + E ++ + +E++ Sbjct: 537 ICEKDELAKISAINNIGPKILDSLKEYLKNEENVKLLRK-FDEIFNYQKIATVASEKL-- 593 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 + V+TG LS SRD + G KV+ SVS KT ++ GE AGSKL KA++L Sbjct: 594 --INLSFVITGKLSN-SRDHYVDLVEANGGKVSSSVSSKTSFLLVGEDAGSKLDKAKKLN 650 Query: 657 IEVIDEAEMLRLL 669 I +I+E + +L Sbjct: 651 IAIINEEQFNEML 663 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 251/680 (36%), Positives = 356/680 (52%), Gaps = 48/680 (7%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + ++ ELRT ++E AP + DAEYD + ELR L HPEL +P Sbjct: 7 IRELADRIVELRTA--YYE------GAPLVADAEYDAVEDELRALIAAHPELAPDPNPLD 58 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VGA P + +RH PMLSL+ E AF +R + KLDGL+ Sbjct: 59 QVGA-PAVLHAPVRHSRPMLSLEKATTPEQVAAFFERFPGQ-------PVVVMPKLDGLS 110 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRT-IRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++++YE+G LV A TRGDGTTG+D+T VR + +P ++ ++P R+EVRGE + ++ Sbjct: 111 LALVYEDGRLVRAVTRGDGTTGDDVTMLVRALVDGVPEQI---DVPGRVEVRGEAVMLRS 167 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F N K NPRNAAAG+LR DP A+R L FF + + EGG D Sbjct: 168 TFLAYNA---AHPDKPLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLG 224 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 G + G+ + +C AE+ A +E R L +DIDG V+++ Sbjct: 225 EG----LRALGI-AGAAMRMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAA 279 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 G + +PR A+AFKF A+E+ T + V + VG+TG I PVARLEPV V G V+ ATL Sbjct: 280 AGTRSNSPRGALAFKFAAEEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLA 339 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERV 418 N I +++GD V++RRAGDVIP V V+ S+R E+V PT CP CG V Sbjct: 340 NQQVIRARDIKVGDTVLVRRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQ 399 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 CT C AQ L H+ SR A D+D +G I++L E + P+D + LT Sbjct: 400 GNSRELFCTNA-SCPAQTVRRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLT 458 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA-AYFGTLEA 537 +L +R+G SA ++ +++++++ R L L I E TAA LA A F +LE Sbjct: 459 KERLLEFDRIGEVSATRMIESIDRSRDVGLRRALIGLAIPMASEGTAARLARAGFASLEE 518 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-----PIVINAE 592 + A E L V D+G VA+ + R + L GV P V+ A Sbjct: 519 VADAGEERLVAVEDIGPKVAASLVEHLTR--LRPELERLRERGVSLDVREEDLPPVVAA- 575 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLV------ELGAKVAGSVSKKTDLVIAGEAAG 646 +P AGKTVV+TG++S + AR + GA A SVS TDL+I G G Sbjct: 576 --GAPLAGKTVVVTGAISDPRSGEKVARPTFQRLCEKAGATAASSVSANTDLLITGAGVG 633 Query: 647 -SKLAKAQELGIEVIDEAEM 665 SKLAKA++LG+E++D+A + Sbjct: 634 ESKLAKAEKLGVEIVDQATI 653 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 201/461 (43%), Positives = 269/461 (58%), Gaps = 16/461 (3%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y++ D+P DA YD MR L LE P L P SPT RVG + F +RH M+S Sbjct: 80 YYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVGGSFSNDFVSVRHPSRMMS 139 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLAVSILYENGVLVSAATRGDG 139 LD+VF E + V L E + CE+K+DGLA++++Y NGVL TRGDG Sbjct: 140 LDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGLALNLIYRNGVLEQGLTRGDG 199 Query: 140 TTGEDITSNVRTIRAIPLKLHG--ENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 TGEDIT NVRTI +IP L G E++P +E+RGEVF+ F +N + G FA Sbjct: 200 VTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGEVFMRWDDFHTLNNEQEDAGRAPFA 259 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-GGELP-DTHLGRLLQ------FKKW 249 NPRNAAAGSLRQ DPRITA R L+F+ +G+G L G + P TH Q + +W Sbjct: 260 NPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWGADHPRGTHDVVADQSQAYDLYTRW 319 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G+PVS S +E+L E R + +DG+V+KV+ L Q LG +RAPRW Sbjct: 320 GVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHALDGIVVKVDDLGLQRTLGATSRAPRW 379 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+K+P +E T + ++ QVGRTG +TPVA L+PV+VAG V+ TLHN E++R G+ Sbjct: 380 AIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLKPVYVAGSTVARTTLHNGFEVKRKGV 439 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERP---EDTREVVFPTHCPVCGSDVERV-EGEAVAR 425 IGD VV+R+AGDVIP++V VL R + RE V P CP CG+ + EG+ R Sbjct: 440 LIGDTVVVRKAGDVIPELVGPVLERRKGREDQLREFVMPEFCPSCGAKLAPAKEGDKDIR 499 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 C C AQ E + SR+A D++ +G++ L E Sbjct: 500 CPNVESCPAQLTERVISLASRKAFDIEHLGEQSAIALTNPE 540 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 12/186 (6%) Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 ++ + + + ++KA+ R L AL IR +G TA +A+ G+L A+E A+IE+L + Sbjct: 735 ENTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLAAIEKATIEDLTAID 794 Query: 551 DVGIVVASHVHNFFAE-----ESNRNVISELLAEGVHWPAPIVINAEEIDSP--FAGKTV 603 VG +A V N+FA + + A GV V AE P AGKTV Sbjct: 795 GVGPEIAESVVNWFAATREPGDWRGATLRAWQAAGVG-----VDEAETSSLPQTLAGKTV 849 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TGSL SRD AK ++E G K AGSVSKKTD V+ G AGSK KA+ELGI ++ E Sbjct: 850 VVTGSLEGYSRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKAIKAEELGIPMLGEI 909 Query: 664 EMLRLL 669 + +LL Sbjct: 910 QFAQLL 915 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 216/686 (31%), Positives = 369/686 (53%), Gaps = 41/686 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PD 56 +E I +++ +L+ + + Y+ +D+PE+PD YD +L+ LE K+ + + Sbjct: 7 IEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELKN 66 Query: 57 SPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT----WCC 112 SPT+++ A F +++H+ PMLSL+ + + +Q + N +K+T + Sbjct: 67 SPTRKINALASDLFKKVKHKRPMLSLNKAYSLD-------EIQKFIDNIKKITSDFSFFI 119 Query: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 E K+DGL++SI+YE+G LV A TRGDG TGED+T+NV + IP + + LEVRG Sbjct: 120 EPKIDGLSISIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTIEYK---ESLEVRG 176 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 EV+L + FEK+N + ANPRNAAAG+LRQL+ +I +R L+ F Y V Sbjct: 177 EVYLAISDFEKLNLKLGQENKNKLANPRNAAAGTLRQLNSQIIKERNLSAFLYYVVD--- 233 Query: 233 GELPDTHLGRLLQ-----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 P H + +Q K +G PV+ V + +++ + + + + ++ DGV Sbjct: 234 ---PLQHNIKTMQEEHEFLKTYGFPVTHEVQHANTLQDIEEYIRNFKNQKLLIDYETDGV 290 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 VIK+N + ++LG A+ P +A+AFK+ + T ++ + VGRTG +T A LEPV Sbjct: 291 VIKLNEVQYFDKLGSTAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVE 350 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 ++G LVS ATL+N I+ L L D V I++AG++IP V+ ++ ++ D + V Sbjct: 351 ISGSLVSFATLNNFQYIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDHFQKV--EF 408 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CP C + + E C+ QR++ L HF S+ +D++ MG++ ID ++ Sbjct: 409 CPYCHNKLVDSETGLEQFCSNDQCPEIQRRK-LIHFCSKDGLDINTMGERNIDLFLKNSL 467 Query: 468 VHTPADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 + P D+F L K L L RMG KS +N++ ++++ K + + AL I +G A Sbjct: 468 ISNPIDIFNLKNKKQDLLKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLA 527 Query: 526 AGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA 585 +A+ +L L +L ++G + + + ++ + + N+ ++ +++ G Sbjct: 528 KFVASKIKSLHNLLNYDFSQLIDYHEIGDKIINSIISWISNDFNKKLVEDIINLGYDLKD 587 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL-GAKVAGSVSKKTDLVIAGEA 644 E I + K+ V+TG+L RL+E G + S+S KT+ ++AGE Sbjct: 588 E----NESITNLLENKSFVITGTLGHPRS--YFERLIEKNGGLIHSSISSKTNYLLAGEN 641 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLLG 670 AGSKL KA +L I +I E ++ +++G Sbjct: 642 AGSKLQKANKLNITIITEEDLFKMIG 667 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 215/677 (31%), Positives = 360/677 (53%), Gaps = 32/677 (4%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I + +L+ + Y D P + D+ YD + +L + E ++ L DSPT+ +G Sbjct: 16 IISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKNIG 75 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKV----TWCCELKLDGL 119 A FS+++H+ PMLSL+ + + F + + K+ + ELK+DGL Sbjct: 76 AKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHIN-------KLGFFPNYFLELKIDGL 128 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++S+ Y+NG L+ A TRGDG +GED+T NV I+ IP ++ +E+RGE++L ++ Sbjct: 129 SISLKYDNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIK---YSKPIEIRGEIYLSKS 185 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F +INE + +FANPRNAA+GSLRQLD I +R L F Y V ++ + + Sbjct: 186 TFYEINECQKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHKIKNFN 245 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED--RPTLGFDIDGVVIKVNSLAQQ 297 L K+ V ++ E+ F E++ R L ++IDG+V+KV+ + Sbjct: 246 DQELF-LKENNFQVPSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDDFSLY 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG ++ PR +AFKF T + D+ VGRTG IT A LEPV + G LVS AT Sbjct: 305 DILGQTSKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP--THCPVCGSDV 415 LHN + +E L L D V I +AG++IP+VV+ LS++ +T +F +C C + Sbjct: 365 LHNYEYVESLKLNKNDNVKIIKAGEIIPKVVS--LSKKNSET---IFKRIEYCTSCNEKL 419 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + E E C C R ++HF S++AM++ G+G + I++ + + +DLF Sbjct: 420 VQPEDEVDQYCINKK-CLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLF 478 Query: 476 KLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L K + G KS N++ ++ ++K + +F++A+GI+++GE +A +A Sbjct: 479 FLEKYKNLIESQPSFGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVK 538 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 L L E+L + D+ + + FF++E+ I +L G+ + + E Sbjct: 539 LLSNLINFDFEKLNNIRDISCKTINSLKCFFSDENEIEEIKIILELGLDFKN---LENEF 595 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 G V+TG+LS+ RD K +++ G V S+S + + ++ GE +GSK+ KAQ Sbjct: 596 ESKKLQGLNFVITGTLSK-PRDFFKELIIKNGGNVLNSISNRINYLLTGEKSGSKIEKAQ 654 Query: 654 ELG-IEVIDEAEMLRLL 669 ++ I+++DE E +L+ Sbjct: 655 KINTIKILDENEFNKLI 671 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 198/456 (43%), Positives = 269/456 (58%), Gaps = 19/456 (4%) Query: 30 IPDAEYDRLMRELRELETKHPELITPDSPTQRVGA----APLAAFSQIRHEVPMLSLDNV 85 + DAEYD L +L+ LE +P+L+TPDSPTQ VG A F H M S+D+V Sbjct: 42 LSDAEYDALFVQLQLLEAAYPDLVTPDSPTQTVGGSGETANTEGFPPHHHLCQMGSIDDV 101 Query: 86 FDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 F A+ RV+ L+ + + E+K+DGLA+S+ Y +G L ATRGDG TGED+ Sbjct: 102 FSYAEVDAWWARVEKSLEGQD-FSVSAEVKVDGLAMSLTYLHGTLAVGATRGDGFTGEDV 160 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 T NV+TI +P++L GEN+P +E+RGEV+LP A F +N R G K+FANPRNAA G Sbjct: 161 TENVKTIATVPVRLSGENVPELVEIRGEVYLPLADFAAMNAARERDGEKLFANPRNAATG 220 Query: 206 SLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLGRLLQF----KKWGL------PVS 254 SL+Q DP AKRPL F +GVG + + HL F + WGL P S Sbjct: 221 SLKQKDPVQAAKRPLAFLAHGVGKVRWADPGAAAHLETQEDFYELLESWGLHSVRETPAS 280 Query: 255 DRVTLC--ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 ++L S E+ ++ R IDGVV+KV+S AQ++ LG ARAPRWA A Sbjct: 281 LGLSLAGIHSLAEIHTVLDQMTAHRHDFAHQIDGVVLKVDSFAQRDALGSTARAPRWACA 340 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 +KFP +E T + +E QVGRTG +TP +E V V G VS ATLHNA E+ R +R G Sbjct: 341 YKFPPEEVHTRLLGIEVQVGRTGRVTPFGVMERVLVDGSYVSRATLHNAKEVARKDVRPG 400 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV-ERVEGEAVARCTGGLI 431 D VV+R+AGD+IP+++ V+S R E V P CP CG+++ + EG+ RC Sbjct: 401 DTVVLRKAGDIIPEILGPVMSLRTAGLPEWVMPDTCPSCGTELGAQKEGDIDLRCPNQSG 460 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 C AQ E L H SR A+D++G+G++ L + E+ Sbjct: 461 CPAQITERLIHVGSRNALDIEGLGEEGALALTQPEF 496 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 19/199 (9%) Query: 486 ERMGPKSAQNVVNA----LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 +R GP A VV L+ AK R L AL IR +G A +A F T+ AL A Sbjct: 598 QRFGPPVAGKVVQTFFEQLQAAKSKELWRVLVALSIRHLGPVAARTIARQFVTMSALRVA 657 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE--------- 592 S E+L + +G V+A+ + ++F ++ ++ A GV V AE Sbjct: 658 SAEQLGEAEGIGEVIAASIRDWFTVPWHQEIVDAWEAAGVG----AVSKAEGASEASLAG 713 Query: 593 --EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 + G TVV+TG++ +R+ A+ + G K GSVSKKTDLV+AG AGSKL+ Sbjct: 714 DTNLAPTLEGLTVVITGNIPGYTRESAQLAVEARGGKATGSVSKKTDLVVAGAGAGSKLS 773 Query: 651 KAQELGIEVIDEAEMLRLL 669 KAQ LGI VI+ A LL Sbjct: 774 KAQALGIPVIESAGFEALL 792 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 229/688 (33%), Positives = 360/688 (52%), Gaps = 59/688 (8%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ME Q++ EL L Y+ D + D E+D EL++LE + E+I +SPTQ Sbjct: 1 MEDKTQRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLE-QETEVILSNSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSL---DNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 +VG + ++ H +P+ SL ++ D + F+ NNE + K D Sbjct: 60 KVGYEVKSKLDKVVHNIPLKSLGKTKSIDDLQKFIG----------NNEILIMD---KGD 106 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL ++Y+NG L+ +TRG+G GEDIT NV+T + IPL++ + L++ GE + Sbjct: 107 GLTCELIYDNGQLLQGSTRGNGEIGEDITHNVKTFKNIPLQI---DFKGYLKLSGESVIL 163 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 FE IN A+ ++N RN AGS+RQLD +I KR + F Y +LE GE Sbjct: 164 DEDFELIN--AKLDEEDKYSNSRNLVAGSVRQLDSKICDKRNVRF--YAFSLLECGEAEF 219 Query: 238 THLGRLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 L+F + G + + +++EE+ K+++ GF IDG+V N++ Sbjct: 220 KTKEEQLEFLSRLGFETIEYIKY-DNSEELEQVISKMQKSAYEKGFPIDGLVFAYNNIEY 278 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 LG P ++A+KF +E T E+QV RTG I PVAR EPV + G +V A Sbjct: 279 ANSLGDTLHHPLHSIAYKFYDEEYETKYIATEWQVSRTGMINPVARFEPVEIEGSVVERA 338 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN D E L L GD + + +A VIP+ V+S E++ PT CPVCG E Sbjct: 339 TLHNLDYFEDLKLGQGDTIKVIKANQVIPK----VMSNDTMSNTEII-PTECPVCGGKTE 393 Query: 417 RVEGEAVARCTGGLI-----CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 E + + LI C A+ + H+ SR AM++DG+ +K I++ V Y+ Sbjct: 394 ----EKLLKTARVLICINPECSAKHISRIVHYCSRNAMNIDGLSEKTIEKFVNLGYLKDI 449 Query: 472 ADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 D++KL K + ++ G KS N++ A+EK+K F++ALG+ VG TA L Sbjct: 450 DDIYKLEQYKEEIINIDGFGTKSYNNMIEAIEKSKHCKLENFIFALGVPSVGLGTAKLLV 509 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF-AEESNRNVISELLAEGVHWPAPIV 588 F ++E + ++EE+ + +G VV + ++N+F + + N++++LL Sbjct: 510 KKFKSIEKVMNCNLEEIYSIDGIGDVVGNEIYNYFIINKDSINLVNKLLK---------F 560 Query: 589 INAEEI----DSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG- 642 I+ EE+ + GKT V+TG + +R++ KA++ E+G KV GSVSKKTD +I Sbjct: 561 IDFEEVKESSSNKLEGKTFVITGDVHVFKNRNEVKAKIEEMGGKVTGSVSKKTDYLINND 620 Query: 643 -EAAGSKLAKAQELGIEVIDEAEMLRLL 669 E+ SK KA++L I +I E E + ++ Sbjct: 621 VESTSSKNQKAKDLNIPIITEEEFVEMI 648 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 223/713 (31%), Positives = 362/713 (50%), Gaps = 69/713 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I++++ L L+H +LY+ +DAPE+ D YD L EL ELE K+P L+ DS T+ Sbjct: 4 QQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSVTKI 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GA F + +H MLSLD + E +F + + KN E + E K+DGL++ Sbjct: 64 IGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFT-QYKNLENFGFSLEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SI Y+NG + A TRGDGTTGED++ NV IR +P ++ + LEVRGE+++ ++ + Sbjct: 123 SIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQI---SYLKPLEVRGEIYMKKSTW 179 Query: 182 EKINEDARRTGGKV----------------------------FANPRNAAAGSLRQLDPR 213 + +NED + + F N RNAAAG+LRQ DP+ Sbjct: 180 KSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAGTLRQKDPK 239 Query: 214 ITAKRPLTFFCYG-VGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHK 272 I R L+ Y V LE T + L K+ V++ L ++ +E++ ++ Sbjct: 240 IVKSRNLSSLFYEIVSPLEHN--LKTQMEVLAFLKEQNFEVNEFQKLAKNDQEIMFEINE 297 Query: 273 VEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVG 332 + + FD DG VIK N + + EQ+GF ++ P+WA+A+K+ +E T + ++ QVG Sbjct: 298 FSKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVAQVG 357 Query: 333 RTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL 392 RTG IT +A+ PV + V NATLHN + I++ + IGD++ I ++G++IP+V+++ Sbjct: 358 RTGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVISIYK 417 Query: 393 SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVD 452 +V+ +CP C S +E EG C C ++ + L FVS+ +++ Sbjct: 418 KNTDSVFEKVL---NCPSCNSLLEIPEGYVDQFCRNE-NCDEKKIQMLTFFVSKNCLNIT 473 Query: 453 GMG---------------DKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVV 497 + +I D + K +V + K AGK K N++ Sbjct: 474 NLSVQNIRIFYNHPVIQMREIQDIFLLKNHVDEIKKI-KFFAGK-----SQENKKINNIL 527 Query: 498 NALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVA 557 ++EKAK+ L ALGI+ +G A L L L + E+L + G Sbjct: 528 QSIEKAKDAYLRNVLAALGIKGIGNIAANLLTNKITKLSDLNNLTDEDLLSIDTFGEKSI 587 Query: 558 SHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDA 617 ++ F + E N+++I + L E +++ +N+++ S +TGSLS +SRD+ Sbjct: 588 ENLKEFLSSEKNQDLI-KFLDENLNY-----LNSKK-SSKLNNLNFAITGSLS-ISRDEF 639 Query: 618 KARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAEMLRLL 669 K +++ G + SVSK T +I+ S K+ KA E I+VI E E LL Sbjct: 640 KKIILDNGGIFSNSVSKNTSYLISNSKENSTKIKKALENNIKVITEEEFHNLL 692 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 216/672 (32%), Positives = 362/672 (53%), Gaps = 33/672 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +E ++ L+ ++ Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 2 IEDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTF 61 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESF-LAFNKRVQDRLKNNEKVTWCCELKLDGL 119 R G+ L F +++H P+LSLD +D + L K V + + E K+DG Sbjct: 62 RFGSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGC 121 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NV+TIR +PL++ + L +RGE+++ + Sbjct: 122 SIVLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRIDEK---IELVLRGEIYITKE 178 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN RT + N RN A+G LR++ + A PL F Y + + +L +H Sbjct: 179 NFLKIN----RTLKNPYVNARNLASGILRRISSKEVANFPLDIFVYDI-LYSSLKLNTSH 233 Query: 240 LGRLLQFKKWGLPVSDRVTLCES------AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + K++G V+ CE ++A K+E R + ++IDGVV+K++S Sbjct: 234 -DAFDKLKQFGFKVN---PFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDS 289 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 ++ LG + P+W++A+KF + M+ V D+ QVGR+G ITPVA +E V VAG + Sbjct: 290 FILRKILGSTSHHPKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASI 349 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 +NA+LHN D I+ +GL +GD VVI R GDVIP V++V+ + + ++ P++CP C Sbjct: 350 TNASLHNQDYIDFVGLNVGDIVVISRRGDVIP-AVDLVIEKLAVGSFKI--PSNCPSCKM 406 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 + + EG A C C + E +K+F S++ M++ G+ +K I+ L EK+++ + + Sbjct: 407 TLIK-EG-AHLFCVNRH-CSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVE 463 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA---- 529 L+ +L L+ K N+ ++E +K F + L +GI+++GE T L Sbjct: 464 LYTFNCDRLINLKGFNLKRINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNL 523 Query: 530 AYFGTLEAL---EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 F T+ L + A++ +L K+ +G +A ++ F +++ + + G+ Sbjct: 524 NSFDTISTLCKNKEAALAKLLKIKGIGERIALNIIEAFNDKTILDKFNFFKELGLKMEED 583 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 N DS GK +TGS SRD +L + GA + SV+K D ++ GE G Sbjct: 584 NT-NDAVYDSFLFGKKFCITGSFKGYSRDVLIEKLTKKGAVFSRSVTKCLDFLLVGEKFG 642 Query: 647 SKLAKAQELGIE 658 K+ KA LGI+ Sbjct: 643 LKVQKANNLGIK 654 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 203/505 (40%), Positives = 277/505 (54%), Gaps = 57/505 (11%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q++ L + Y+ DAP + DAEYD L +ELR LE +P+L DSPT+ Sbjct: 19 ETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAEDSPTRT 78 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A A I H M SLDNVF E + L +V + ELK+DGLA+ Sbjct: 79 VGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGG--EVRYLTELKIDGLAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YE+G LV+AATRGDG TGED+T N I IP +L G PA +EVRGEVF+P A F Sbjct: 137 NLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVRGEVFMPTADF 196 Query: 182 EKINE-----------------DARRTGGK-----------------VFANPRNAAAGSL 207 E++N+ ++R+ G+ FANPRN AAG L Sbjct: 197 ERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFANPRNTAAGGL 256 Query: 208 RQ-LDPRITAKR--------PLTFFCYGVGVLEGGELPDTHLGRLLQ----FKKWGLPVS 254 RQ LD + +R L +G+G PD +G + WGLP S Sbjct: 257 RQQLDKKEGLEREAGEARLAALRLTVHGLGAW-----PDPPVGSQSEMYELLASWGLPTS 311 Query: 255 DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFK 314 + + +S +EV A+ E R L +IDG+V+KV+S AQQ LG +RAPRWA+A K Sbjct: 312 RYMDVVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPRWAIAVK 371 Query: 315 FPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDK 374 FP +E T + D++ QVGRTG +TP +EPV VAG V ATLHN ++ER G+ IGD Sbjct: 372 FPPEEVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKGVLIGDT 431 Query: 375 VVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV--ERVEGEAVARCTGGLIC 432 +V+R+AGDVIP+++ V S R R V P CP CG+++ ER EG+ RC C Sbjct: 432 IVLRKAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPER-EGDKDWRCPNQRDC 490 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDK 457 AQ ++H SR A D++ +G++ Sbjct: 491 PAQVTGRVEHAGSRGAFDIESLGEE 515 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 11/183 (6%) Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 KS + +++ LEKAK R L AL IR VG A LA +G+++A+ AS+E+L Sbjct: 655 KSTEVLISELEKAKSQPLWRVLVALSIRHVGPTAARSLATAYGSMDAIREASVEQLSDTD 714 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA----GKTVVLT 606 VG ++A V +FA + +R ++ W V A+E++ F G TVV+T Sbjct: 715 GVGEIIAEAVVEWFAVDWHRELVD-------GWARSGVRMADEVEEGFTKTLEGLTVVVT 767 Query: 607 GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 G L +RD AK ++ G K +GSVSKKTD V+ GE AGSK KA+ELG+ ++DEA + Sbjct: 768 GGLEGFTRDGAKEAIITRGGKASGSVSKKTDFVVVGENAGSKETKARELGLRILDEAGFV 827 Query: 667 RLL 669 LL Sbjct: 828 ALL 830 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 228/686 (33%), Positives = 358/686 (52%), Gaps = 48/686 (6%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +L L Y+ ++P I DAEYDR+ EL ELE K I +SPTQ VG Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELE-KQTGFILSNSPTQTVGYT 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P++ +++H VP+LSLD K+VQD + K LKLDGL ++Y Sbjct: 70 PISELPKVKHPVPLLSLDKT----------KQVQDLISFAGKQPVLFMLKLDGLTTKLVY 119 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP--ARLEVRGEVFLPQAGFEK 183 ENG LV A+TRGDG GE IT N+ +PL +IP RL + GE F+P FE+ Sbjct: 120 ENGTLVEASTRGDGEIGELITHNIPAYVDVPL-----SIPYKGRLVIVGESFIPTHDFER 174 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE----LPDTH 239 + E R G+ + N RN A+GS+R LDP A R L F + V LEG + PD+ Sbjct: 175 LKETLRDGKGEPYKNGRNLASGSVRSLDPANCAGRCLHFMPFNV--LEGLDSPFLFPDSR 232 Query: 240 LGRLLQFKKWGLPVSDRVTLCE--SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 ++ +G + ++E V + ++ + IDG+V+ +SL Sbjct: 233 AMKISSLFDYGFQPCPYIAANHPLTSELVNQYIERLTDLAGKKHLPIDGIVMIFDSLDYS 292 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + G + +AFKF + T +R++E+ R G I PV +PV + G VS AT Sbjct: 293 KNCGRTGHHYKDGLAFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRAT 352 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN I+ L L G ++ + + +IP + + ER V P CP CGS Sbjct: 353 LHNLTFIKELELVPGCRISVSKRNMIIPHIEENL--ERGHYVDAV--PPVCPCCGSQTRI 408 Query: 418 VEGEAVARCTGGLI---------CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 + + G LI C +Q ++ HFV ++AM+++G+ + +++ + Y+ Sbjct: 409 YQRKG---NDGRLIETVHCDNPNCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYL 465 Query: 469 HTPADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 T D++ L + + LE G KS + + N++ ++ TTF RFL ++ I VG + Sbjct: 466 QTFPDIYHLNEHQEEILQLEGFGKKSFERLWNSITSSRNTTFVRFLVSMDIPMVGRTKSR 525 Query: 527 GLAAYF-GTL-EALEAASIE-ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 L F G+L E +AAS + + ++ D G + ++H++F++E+N + EL E + + Sbjct: 526 ILDTVFHGSLQEFFDAASGDYDFTQLDDFGDTLNQNIHDWFSDENNLILWHELQKELI-F 584 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 +N ++ F G T+V TG L+ +RD+ ++++ELGAK SV+KKTD +I GE Sbjct: 585 EERKEMNTMMKENVFTGCTIVATGKLAHFTRDEINSKILELGAKAGSSVTKKTDYLICGE 644 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLL 669 AGSKLAKAQ LGI+++ E E L ++ Sbjct: 645 KAGSKLAKAQSLGIKILSEDEFLEMI 670 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 238/711 (33%), Positives = 368/711 (51%), Gaps = 89/711 (12%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L + ++ H LY+ PEI DA++D L++ LRE++ +P+L ++VGA P Sbjct: 14 LASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL-------EKVGADPAPGS 66 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 ++ H PMLSLD + F + + + + KLDG A+S+ Y G+L Sbjct: 67 VKVEHIYPMLSLDKANTPQEIAHFVN-----ITSAATQRFVVQPKLDGSAISLEYRRGML 121 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARR 190 V A TRG GT GED+T NVR I NIP R++ RG F+ + + + R Sbjct: 122 VRAVTRGSGTRGEDVTRNVRRI---------PNIPNRIKWRGNCFV-RGEVVMLLDTYRE 171 Query: 191 TGGKVFANPRNAAAGSLRQLDPRITAKRP--LTFFCYGVGVLEG--GELPDTHLGRL--L 244 +V NPRN AAG+LRQ +P R L FF Y V EG GE L + Sbjct: 172 NYAEVAPNPRNLAAGALRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNYIHDS 231 Query: 245 QFKKWGL-----PVSDRVTLCESAEEVLAFY-HKVEE---DRPTLGFDIDGVVIKVNSLA 295 Q +W P V + ++EV+ K EE R + ++IDG+VIKV+ L Sbjct: 232 QILEWLFTMDIQPAGRFVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKVDELT 291 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 ++ LG A PRWA+A+KFP +E T V V++Q GRTG +TPVAR+ PV V+GV V N Sbjct: 292 KRPLLGETAHHPRWALAWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGVTVEN 351 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV------------------LSERPE 397 TLHN E+ERLGL+IGD+V+I R GDVIP++ V+ E Sbjct: 352 TTLHNPGEVERLGLKIGDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFHEALP 411 Query: 398 DTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 + +V P+ CP CG+++ R +G C ++ S+ ++ +++++DG+G+K Sbjct: 412 ERIDVEPPSVCPRCGTNLHSEGAFLKCRNSG---CPSRVVRSILYWC--KSLEIDGVGEK 466 Query: 458 IIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGI 517 + +QLVE ADL++L+ + LERMG KSA+ V++ ++ ++ + F+ +LG+ Sbjct: 467 LANQLVESGLAPELADLYRLSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIASLGL 526 Query: 518 REVGEATAAGLAAYFGTLEALE------AASIEE-------LQKVPDVGIVVASHVHNFF 564 +G A+ ++ T+E ++ EE L + +G +VA F Sbjct: 527 PRIGPEIASMISKEIKTIENFRNLVNTWSSGREETTDILPRLVAIDGIGEIVA----RLF 582 Query: 565 AEESNRNV-----ISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKA 619 + S N +S LL P+ I P AG T+ +TGS+++ R + + Sbjct: 583 LDGSKSNWSQIEDLSSLLE-----ITPMQTENRSI-GPLAGLTLCITGSMTR-PRKEVEL 635 Query: 620 RLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + G KV SVS + D +IAG+AAGSKL KA L + V++E ++++ +G Sbjct: 636 LIRSAGGKVVSSVSSRLDYLIAGDAAGSKLEKATRLQVSVLNEEQLMQKIG 686 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 217/685 (31%), Positives = 361/685 (52%), Gaps = 38/685 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +E+++ +LR + H+ Y D P I D EYD+L +L LE +PE +SPT+ Sbjct: 1 MNKVEEKIRDLREEVIKHDLAYAKGD-PIISDTEYDKLYLKLVGLEELYPEYSDENSPTK 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+ + ++ H +PMLS + + F +++ D L E KLDGL Sbjct: 60 RIIDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDEL--------LVEDKLDGLT 111 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR--LEVRGEVFLPQ 178 V Y NGVL TRGDG G+DIT V IP + IP LE+R E +P Sbjct: 112 VIAKYNNGVLYEGITRGDGKIGDDITHIVLNTPNIP-----KTIPFNDYLEIRLEGIIPN 166 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 FE +N + + RN A+G++R L+ + +R L + + V + + Sbjct: 167 EDFEMVNSILEEEDK--YKSSRNLASGTVRSLNGCVAKERGLKLIAFEL-VKADNIIFEK 223 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKV----EEDRPTLGFDIDGVVIKVNSL 294 RL K G V + ++ E++L + +E RP L + +DG+VIK NSL Sbjct: 224 DYERLEFLKTLGFDVVNYTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKANSL 283 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 ++ LG ++ P+W+ AFKF +E +T ++D +VG++G +TPVA EPV + G+ +S Sbjct: 284 ELRDSLGNTSKYPKWSSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITIS 343 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATL N ++ ++IGD VV+ RA DVIP++ + + +R + +E+ P CPVC Sbjct: 344 KATLSNFKNVKDKDIKIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCN-- 401 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 E + E V C AQ + + HFVS++++D+DG+G++ I ++ + + D+ Sbjct: 402 -EPIVKENVHYFCVNDDCPAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSIIDI 460 Query: 475 F--KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 F K L L++ K N++ +E +K+ + ++ L+ L I+ +G + LA F Sbjct: 461 FYLKDKKDDLLKLDKYADKKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELANKF 520 Query: 533 GTLEALEAASIEE------LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 +++ + S E + + + G +++++ FF +E N +I++L+ G Sbjct: 521 ISMKNILNISKNEEEFKQSILSINNFGEEMSNNLVLFFKDERNIELINKLMEVGFKMEEQ 580 Query: 587 IV-INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARL-VELGAKVAGSVSKKTDLVIAGEA 644 IV +N EE + GKTVV+TG + +R++ ++ E G K + SVSKKTD +I G+ Sbjct: 581 IVKVNEEE--NMLTGKTVVITGKFTDFTREELTEKIENEFGGKCSKSVSKKTDFLIYGDK 638 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLL 669 AGSK KA ELG+++I E E+L ++ Sbjct: 639 AGSKYNKALELGVKLITEKELLDII 663 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 213/671 (31%), Positives = 352/671 (52%), Gaps = 32/671 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ IE ++ LR +R Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 10 IKDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTL 69 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFD-EESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 + G+ L F ++ H P+LSLD +D +E L K V + E K+DG Sbjct: 70 KFGSDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGC 129 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NVRTI+ +PL + + L +RGE+++ + Sbjct: 130 SIVLYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSIDEK---VELVLRGEIYITKE 186 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + + N RN A+G LR+++ R A PL F Y + G L H Sbjct: 187 NFLKINHTLKNP----YLNARNLASGILRRINSREVASFPLDIFVYDILYSSFG-LSTNH 241 Query: 240 LGRLLQFKKWGLPVSDRVTLC--ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + KK+G ++ ++ EE+ K+E R +L ++IDGVV+KV+S + Sbjct: 242 -DAFDKLKKFGFKINPFCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILR 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG+ + P+W+VA+KF + ++ + D+ QVGR+G ITPVA +E V VAG ++NA+ Sbjct: 301 DILGYTSHHPKWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN D I+ +GL +GD V I R GDVIP V +V+ + + ++ ++CP C + + Sbjct: 361 LHNQDYIDSIGLNVGDVVAISRRGDVIP-AVELVVEKLSIGSFKI--SSNCPSCKMALIK 417 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 EG + C C + E +K+F S++ M++ G+ K I+ L E +++ + +L+ Sbjct: 418 -EGSHLF-CVNKH-CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTF 474 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA------- 530 +L L K N+ ++ +K F + L +GI+E+G T L Sbjct: 475 NFDRLINLRGFDLKRIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFD 534 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEE---SNRNVISELLAEGVHWPAPI 587 TL + A++ +L K+ +G +A ++ F ++ N EL + + Sbjct: 535 IISTLCKNKEAALAKLLKIKGIGEKIALNIIEAFNDKIILDKFNFFKELGFKLEEYNTNY 594 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 V++ DS GK +TGS SRD ++ + GA +V+K+ D ++ GE G Sbjct: 595 VVD----DSFLFGKKFCITGSFEGHSRDVLIEKITKKGAIFNRAVTKRLDFLLVGEKPGL 650 Query: 648 KLAKAQELGIE 658 KL KA LGI+ Sbjct: 651 KLQKANNLGIK 661 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 206/606 (33%), Positives = 328/606 (54%), Gaps = 55/606 (9%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITP-DSPTQRVG-AAPLAAFSQIRHEVPM 79 Y+ + + D EYD L EL++ E H + + +SP+ VG AA L F ++H PM Sbjct: 26 YYQENTSLMSDVEYDALEHELKDAE--HAKGFSDRNSPSLTVGIAAQLNLFEPVKHIEPM 83 Query: 80 LSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDG 139 LSLDNVF + ++ ++ + ++ T+ CELK+DG+ VS+ Y NG L+SAATRGDG Sbjct: 84 LSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGVSLRYANGYLISAATRGDG 143 Query: 140 TTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANP 199 GEDIT N+ + +IP ++ +P E+RGE F+ + F++IN+ + K FANP Sbjct: 144 AIGEDITQNMLYVPSIPPRI---ALPGIFEIRGEAFIKRDEFDRINQLSLERS-KQFANP 199 Query: 200 RNAAAGSLRQLDPRITAKRPLTFFCYGV----GVLEGG---------------ELPDTHL 240 RN +G +R P + ++F+ +G G GG E+ Sbjct: 200 RNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLHSDITASGGVKTEIEHGMF 259 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + +PV+ LC + E+ ++ + +R + + IDG+V+K++SL +Q L Sbjct: 260 SAYSRLSECKIPVNSYNRLCTNFSEIESYIENIRLNRQCVPYAIDGIVVKIDSLQKQALL 319 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +APRWAVA+KFP++ +T + D+E VGRTG +TP A L+P+ + G VS ATLHN Sbjct: 320 GSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAVLQPIQLDGSEVSRATLHN 379 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF--PTHCPVCGSDVERV 418 I L IGD V IR+AGD++P+V+ + +R D EV+F P+ CP CG+++ Sbjct: 380 QKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKR--DGSEVLFKMPSLCPSCGAELMPS 437 Query: 419 E-GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD--LF 475 + G+ RC C Q L++ SR +D+ + ++ L A+ LF Sbjct: 438 KLGDIDLRCPNMQSCLVQLAGRLEYIGSRGVLDIAYLAEENAYALSHLRKFGKSAEVQLF 497 Query: 476 KLTAGKLTGLERM------GP---------------KSAQNVVNALEKAKETTFARFLYA 514 K+T L LE M P KSAQ++V+++E+AK + +FL A Sbjct: 498 KITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQDMVDSIERAKRSPLWKFLLA 557 Query: 515 LGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVIS 574 L IR +G A+A LA +FG++E++ A I+EL KV +G +A VH++F + +++ Sbjct: 558 LNIRHIGPASAKALADHFGSIESIINAKIDELLKVRSLGETIAISVHDWFRDPWRVELVN 617 Query: 575 ELLAEG 580 ++G Sbjct: 618 TWRSDG 623 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 242/675 (35%), Positives = 327/675 (48%), Gaps = 56/675 (8%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV--GAAPLAAFSQ 72 LR Y+ + DA YDRL L ET+HP + P SPT V GAAP Sbjct: 35 LREASQAYYGDGDSVMDDASYDRLRLALLAWETEHPAEVAPGSPTTLVADGAAPA---GD 91 Query: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 132 + H +LSLDNVFD E +A+ V+ RL + E K+DG AV+ Y G LV Sbjct: 92 VAHTTRLLSLDNVFDAEGLVAWGASVERRLGRAPAGGFTVEPKIDGAAVAARYRGGRLVR 151 Query: 133 AATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTG 192 TRGDG+ GEDI+ + I +P L GE A +EVRGEV Q FE N G Sbjct: 152 IVTRGDGSQGEDISHVIGQIDGLPELLAGE---ATVEVRGEVAFTQEQFEVANAVRVAHG 208 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRP----LTFFCYGVGVLEGGELPDTHLG------- 241 VFANPRN AG+LR D RP +TF+ YG LEG +P G Sbjct: 209 APVFANPRNGTAGTLRAKD------RPYRLRMTFWAYGAVELEG--VPFLPAGATQAEAL 260 Query: 242 --------RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 R GL + D + + A + +A R L IDGVVIK+N Sbjct: 261 AAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAMAAM------RAELPVGIDGVVIKLND 314 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 A+QE +G R P WA+A K PA E+ T + DV ++VGRTG + P A L PV + G V Sbjct: 315 TAEQEAIGSGTRFPYWAIAVKLPAVERQTVLEDVVWEVGRTGVLAPTAVLAPVEIDGSTV 374 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 + ATLHN +I R L IGD V + +AGD+IP+V V RP + V P CP CG Sbjct: 375 TRATLHNPADIRRRDLHIGDTVTVYKAGDIIPRVQAAVALLRPAGAKPVPLPETCPRCGG 434 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 ++ + RC G C +++ R +D+DG+G + LV+ V AD Sbjct: 435 EINTAQER--WRCAKGTSC--ALPALIEYAAGREMLDIDGLGKTYVAALVDSGDVTDVAD 490 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 LF LT +LT ++A+ + +E AK +R ALG+ G + + +A +F Sbjct: 491 LFTLTLEQLTAASGSSRRAAK-LAEQIEAAKARPLSRVFCALGVLGTGRSMSRRIARHFV 549 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 T+EA+ A E+Q V +G A + A + VI +L+A GV P Sbjct: 550 TMEAIRRADAAEMQDVEGIGPEKAPVIVEQVAALA--PVIDKLIAAGVTLHEPEASATAS 607 Query: 594 IDSPFAGKTVVLTGSLS----QMSRDDAKARLVELGAKVAGSVSKKTD-LVIAGEAAG-- 646 P GK VV+TG ++ R + A + + G + VS +T LV A A+G Sbjct: 608 AGGPLDGKVVVVTGKMAGPLEGFGRTEMNALIEKAGGRAGSGVSARTSVLVCAPSASGKP 667 Query: 647 -SKLAKAQELGIEVI 660 SK KA ELG+EV+ Sbjct: 668 SSKAVKAAELGVEVL 682 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 325 bits (834), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 213/708 (30%), Positives = 358/708 (50%), Gaps = 66/708 (9%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPD----SPT 59 I ++ ELR + + Y+ + P + D YD+ +REL +LE ++ L + + SP+ Sbjct: 7 IRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQSPS 66 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 Q+VG+ + F ++ H PMLSL+ + E + K+ ++ LK VT+ E K+DG+ Sbjct: 67 QKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILKT---VTFFVEPKIDGI 123 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR------LEVRGE 173 A+S+ Y+NG L+ A TRGDG GE++ N LK++ E IP + LEVRGE Sbjct: 124 ALSLFYQNGNLIKALTRGDGVFGENVLVNA-------LKINDEFIPKKINYLEDLEVRGE 176 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLD---PRITAK-----------RP 219 +++ + F + + ++ F NPRNAA+G LR+ P+I AK R Sbjct: 177 IYIDNSTFASLQLETKK-----FKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRY 231 Query: 220 LTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPT 279 L F Y + E ++ ++ + + G V+ C ++V F +++ R Sbjct: 232 LKSFFYTLVNPEKHKI-NSQFDSINFLRNLGFQVNPFQKKCSDLKDVFNFISIIKQKRDF 290 Query: 280 LGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITP 339 L ++IDGVV+KVN + E+LG ++ P A+AFKF T + + +GRTG +T Sbjct: 291 LNYNIDGVVVKVNEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTY 350 Query: 340 VARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT 399 A++EPV +AG +S+A L N IE L L + +V I++AG++IPQ++ V P+ Sbjct: 351 NAKIEPVTLAGSKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSV-HNYPKTN 409 Query: 400 REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII 459 +V +CP C S++ E C C + + HF S+ A++++ + K I Sbjct: 410 FSIV--KNCPKCNSELVNSESGLDQFCQNQF-CPEIILQKIVHFCSKNALNIESLAQKRI 466 Query: 460 DQLVEKEYVHTPADLFKLT----------------AGKLTGLERMGPKSAQNVVNALEKA 503 ++ +EK + + D+F L K + M KS ++N +E+A Sbjct: 467 EKFLEKGLISSACDIFYLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERA 526 Query: 504 KETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNF 563 K F R ++ LGIR VG A L+ Y L L L+ D G V+ + ++ Sbjct: 527 KNIDFYRLIFGLGIRNVGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDY 586 Query: 564 FAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVE 623 F + N ++ L G ++ + N + FA ++G LS+ RD+ + E Sbjct: 587 FNNQKNSEQLNCLETVGFNFKTTFLTNQSNSWASFA-----ISGKLSK-PRDEYVRIIEE 640 Query: 624 LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 GA SV+KKTD ++ G++AGSK+ KA++ GI++I+E + L+ + Sbjct: 641 SGASFHESVTKKTDFLLLGQSAGSKIEKAKKAGIKIINEVQFFDLIKN 688 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 242/664 (36%), Positives = 342/664 (51%), Gaps = 57/664 (8%) Query: 27 APEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVF 86 +P + DAEYD ELR L +PEL +P +VGA P + +RH PMLSL+ Sbjct: 33 SPLVADAEYDATEDELRSLIAANPELTPDPNPLDQVGA-PAVLHAPVRHARPMLSLEKAT 91 Query: 87 DEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDIT 146 E AF DR V KLDGL++S++YE G L+ A TRGDGTTG+D+T Sbjct: 92 QPEQVAAF----LDRFPGQPVVVMP---KLDGLSLSLVYEGGALLRAVTRGDGTTGDDVT 144 Query: 147 SNVRTIR-AIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 VR + +P ++ P R+EVRGE + ++ F NE K NPRNAAAG Sbjct: 145 PLVRALADGVPTRVPA---PGRVEVRGEAVMLRSTFTAYNE---AHPDKPLINPRNAAAG 198 Query: 206 SLRQLDPRITAKRPLTFFCY--------GVGVLEGGELPDTHLGRLLQFKKWGLPVSDR- 256 +LR DP A R L F + G GV G +L + R L F P R Sbjct: 199 TLRAKDPATVAGRRLRFLAFELDTDAEAGAGV--GADLEEGL--RALGFT----PADMRH 250 Query: 257 VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFP 316 E+A+ V+ +E R L +D+DG V+++ G + +PR A+AFKF Sbjct: 251 AADAEAAQRVIT---GIETGRADLDYDLDGAVLRLADRRAYAAAGTRSNSPRGALAFKFA 307 Query: 317 AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVV 376 A+E+ T + DV + VG+TG + PVA LEPV V G V+ ATL N + I+ G+ +GD V+ Sbjct: 308 AEEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQEVIKARGVMVGDTVL 367 Query: 377 IRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 +RRAGDVIP V V+ ++R + RE+V P+ CP C + CT + C AQ Sbjct: 368 VRRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGNSRELFCT-NVSCAAQ 426 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 L H+ SR A D+D +G I++ E + P+D + LT +L ER+G SA Sbjct: 427 TVRRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKEQLLEFERVGETSATR 486 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLA-AYFGTLEALEAASIEELQKVPDVGI 554 ++ ++ ++ R L + E TA L A FG+LE + A E L +V D+G Sbjct: 487 MIESIAASRAVGLRRALIGFAVPMASEGTATRLCRAGFGSLEEVADAGEERLVEVEDIGP 546 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPA------PIVINAEEIDSPFAGKTVVLTGS 608 VA+ + A R ++ L GV P+V + D+P AGKTVV+TG+ Sbjct: 547 KVAASLTEHLAR--LRPELTRLRQRGVSLDVRDEDLPPVVAS----DAPLAGKTVVITGA 600 Query: 609 LSQMSRDDAKA-----RLVE-LGAKVAGSVSKKTDLVIAG-EAAGSKLAKAQELGIEVID 661 +S + A RL E GA A SVS TD++I G E K AKA++LG+ V+D Sbjct: 601 ISDPRSGEKVARPAFQRLCEKAGATTASSVSANTDMLITGAEVGAGKTAKAEKLGVAVVD 660 Query: 662 EAEM 665 + E+ Sbjct: 661 QGEI 664 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 252/716 (35%), Positives = 359/716 (50%), Gaps = 91/716 (12%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ EL L HH LY+ AP I DAEYD L EL+ L+ HP+L RVG+ P Sbjct: 14 RIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQL-------DRVGSDP 66 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ H PM SLD + F + + + C+ KLDG A+S+ Y Sbjct: 67 APGSVKVEHLFPMQSLDKASEVAEISHFVAQTTAHGRR-----FVCQPKLDGSALSLEYR 121 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G LV AATRG+G GED+T+N R I IP L + +RGEV +P F Sbjct: 122 RGRLVRAATRGNGERGEDVTANARRIPNIPESLGWD---GDCHIRGEVVMPLETF----- 173 Query: 187 DARRTGGKVFA-NPRNAAAGSLRQLDPRITAKR----PLTFFCYGVGVLEG--GELPDT- 238 R+ FA NPRN AAGSLRQ + A + L+F YGV + G + PD+ Sbjct: 174 ---RSKYASFAPNPRNLAAGSLRQ--KHVKAGKGDAADLSFHAYGV-MFPGLDHKHPDSP 227 Query: 239 ---HLGRLLQFKKW----GLPVSDRVTLCESAEE--------------VLAFYHKVEEDR 277 Q W G+ + + +E +L R Sbjct: 228 APPDFNHDSQAIDWLTQNGIAAAGNEVVEAGVDEGIEEAEADEAVAEALLQVTENWARKR 287 Query: 278 PTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAI 337 T +++DGVVIK++ ++E LG A PRWA+A+KFP +E T + V++Q GRTG + Sbjct: 288 DTADWELDGVVIKLDEFRKRELLGKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTV 347 Query: 338 TPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE 397 TPVAR+ PV V+GV V N TLHNA EIERLG+ +GD+V I R GDVIP++V V+ Sbjct: 348 TPVARVAPVRVSGVTVENTTLHNAGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSA 407 Query: 398 DT------------------REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKES 439 D R V P +CP C S ++ E A RC L C ++ + S Sbjct: 408 DLDNRFHADGTPFADPLPLRRGVKIPANCPRCRSGLQ--EDGAFIRCF-NLECPSRLERS 464 Query: 440 LKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNA 499 + ++ RA+++DG+G+K+ +QL E V T DL++L+ L GLERM KSA NV+ Sbjct: 465 ILYWC--RALEMDGIGEKLAEQLCEAGLVKTLPDLYRLSGKDLEGLERMAEKSAANVIAQ 522 Query: 500 LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL------EAASIEELQKVPDVG 553 L+ +K A FL ALG+ +G A G A G+ A+ A++E L ++ VG Sbjct: 523 LDDSKTLDLAAFLAALGLPGIGPELAGGFAQEIGSSTAMFELLADSEAAVERLIRIEGVG 582 Query: 554 IVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMS 613 VA + E R ++ +L V + A E G+T +TG+L++ Sbjct: 583 ETVAGSFLSGL--EMRREMVEDL----VDVLTITDVEAVEKSGSLTGQTFCITGTLTR-P 635 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 R + + G KV +VS K D ++AGE+AG KL KA L + V+ EAE+L ++ Sbjct: 636 RKEVALMIKAAGGKVVSAVSGKLDHLVAGESAGLKLDKANRLSVNVLSEAEVLSMI 691 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 215/663 (32%), Positives = 348/663 (52%), Gaps = 45/663 (6%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+ + + + EYD+L EL ELE K ++ +SP+ VG L+ + RHE PMLS Sbjct: 22 YYQENTEIMSNIEYDKLYDELLELE-KETGVVLSNSPSIHVGYELLSNLPKERHEKPMLS 80 Query: 82 LDNVFDE---ESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGD 138 LD D + +L K + ++W KLDGL + + Y++G LV A TRG Sbjct: 81 LDKTKDVGTLKEWLGTQKGI---------LSW----KLDGLTIVLTYQDGHLVKAVTRGT 127 Query: 139 GTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFAN 198 G GE IT+N R R +P+ + L +RGE + + F KIN + G K + N Sbjct: 128 GEEGEVITNNARVFRNLPVTIA---YKGTLILRGEAIIRYSDFIKINNEIADVGVK-YKN 183 Query: 199 PRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSD--R 256 PRN +GS+RQL+ ++T++R + FF + + + EL ++ ++ K G + D Sbjct: 184 PRNLCSGSVRQLNNKVTSERNVYFFGFSLVKADNVELDNSRASQMNWLKNQGFDIVDFKE 243 Query: 257 VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFP 316 VT E V F +E + F DG+V+ +A E LG A+ PR ++AFK+ Sbjct: 244 VTSSNIEETVQWFSQNIEAN----DFPSDGLVLTFEDIAYGESLGSTAKFPRDSIAFKWR 299 Query: 317 AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVV 376 + + T + ++E+ RTG I P+A EPV + G VS A++HN +E L L IGD + Sbjct: 300 DEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTTVSRASIHNISIMEGLELGIGDTIG 359 Query: 377 IRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC--GSDVERVEGEAVARCTGGLICGA 434 + +A +IPQ+ SE + P CPVC +++++ G C C A Sbjct: 360 VYKANMIIPQI-----SENLTRSGMAPIPEECPVCKGKTEIKQENGVKTLYCVNNE-CLA 413 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK--LTGLERMGPKS 492 ++ +S HFV R AM+++G+ + +++L+ K + ADLF + K + LE +G KS Sbjct: 414 KQIKSFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELADLFHIEKYKNEILELEGLGEKS 473 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT-LEALEAASIEELQKVPD 551 ++ ++ KA++TT R LY+LGI VG + A + YF +E A EL ++ Sbjct: 474 FNKLITSINKARKTTAVRLLYSLGIPNVGLSNAKLICRYFKYDWNKIENAEFSELIQIGG 533 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G ++A FF++E + ++ ++L E + + +E+I F V+TGS+ Q Sbjct: 534 IGDIMAESFIRFFSDEKKKVIVQDVLNE-LELEEVQLSQSEQI---FENLNFVITGSVEQ 589 Query: 612 M-SRDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKLAKAQELGIEVIDEAEMLRL 668 +RD+ K + E G KV G+V+ KT+ +I + + SK KA+EL I +I EA+ L Sbjct: 590 FKNRDELKDVIEEKGGKVTGAVTSKTNYLINNDNMSNSSKNKKAKELNISIITEAQFLEW 649 Query: 669 LGS 671 L + Sbjct: 650 LNN 652 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 206/681 (30%), Positives = 345/681 (50%), Gaps = 52/681 (7%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ EL L + Y+ ++ DAEYDRL EL ELE + ++ +SPTQ VG Sbjct: 18 KRIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENE-TGVVYTNSPTQSVGYE 76 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 + +++H PMLSLD K V D +K LK+DGL + Y Sbjct: 77 VKSELEKVKHSHPMLSLDKT----------KSVDDLVKFAGDKDCILSLKMDGLTCLLTY 126 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG LV A TRGDG GE IT N + IPL + + E+ GE + F+KIN Sbjct: 127 ENGELVQAETRGDGEIGELITHNAKVFENIPLSI---DYKGHFEIEGEAIITYEDFDKIN 183 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + K + NPRN A+GS+RQLD +I A+R + F + V D + Sbjct: 184 KSL--PDDKKYKNPRNLASGSVRQLDSKIAAQRHIKFIAWKVPT-------DIASSSFIN 234 Query: 246 FKKWGLPVS-DRVTL------CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 ++ L + D V C +AE + ++ + F IDG+V N + E Sbjct: 235 RLQYALDIGFDTVPFLPIRGNC-NAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGE 293 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG P+ ++AFKF + T +R++E+ +G+TG +TPVA + V +AG VS A+L Sbjct: 294 SLGMTGHHPKHSIAFKFAEDSEETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASL 353 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN ++ L + IG V + + ++IPQ+++ + D PT CPVCG + V Sbjct: 354 HNISIMKELNISIGSTVTVVKKNEIIPQIISCDANAMDAD-----IPTTCPVCGGETRIV 408 Query: 419 E--GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + V C C + + HFVS++ MD+ G+ ++ I +L+E ++ D++ Sbjct: 409 KENDSEVLMCVNPH-CKGKLLGRVSHFVSKKGMDISGLSEETIKKLIELGWITEITDIYN 467 Query: 477 LTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L +L+ + G KS + ++E +K +F+ +L + +G + + L FGT Sbjct: 468 LDQYYDRLSTMSGFGKKSVDKLRTSIENSKTVRLDKFIASLSVPGIGTSQSKELVKAFGT 527 Query: 535 LEALEAASI--EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + AS+ + ++ G V+ +++H++F + SN I++ LA + + + + Sbjct: 528 WDKFRDASVGYYDFTQLDGFGDVLNNNIHSWFEDMSN---IADYLASLMTFESE---DNS 581 Query: 593 EIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKL 649 + ++ GK+ V+TG + + +RD+ K + + G KV GSV+K T +I E+ SK Sbjct: 582 KTNNSLNGKSFVVTGKVYKFKNRDEVKEAIEKFGGKVTGSVTKSTFALINNDIESNSSKN 641 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA+ELG+++I+E +++ +LG Sbjct: 642 KKAKELGVQIINEEQLIEMLG 662 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 235/682 (34%), Positives = 339/682 (49%), Gaps = 56/682 (8%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA-FSQI 73 +RH+ Y+Y+V+D IPD+ YD+L+ L+ LE +HPE +T DSPTQ VG + F + Sbjct: 14 IRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGHPVYESHFELV 73 Query: 74 RHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVTWCCELKLDGLAVSILYENGVL 130 + PMLSLDN+F + + ++ + + K +E E K+DGL++ + Y + Sbjct: 74 KRVKPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKMDGLSLDVNYTYDTM 133 Query: 131 VSAATRGDGTTGEDITSNVRTIRAIPLKL----HGENIPARLEVRGEVFLPQAGFEKINE 186 A+TRGDGTTGED+T N + IP L HG + +RGEV + A + +IN Sbjct: 134 ELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGG-----VSIRGEVVVRLADYNQINA 188 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD-THLGRLLQ 245 D G K FANPRN AAGSLRQ DPRIT +R L F Y V G P+ T Sbjct: 189 DLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLGD--PEATWYDDQAW 246 Query: 246 FKKWGLPVSDRVTLCESAEEVL-----AFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 K+ G +D + + A + + +R + F++DG+V KV +E L Sbjct: 247 LKENGFYTADTGKRLSHDQRGMTSGFPALIAECQAERSSYPFEVDGIVFKVVKHTHRETL 306 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ +R PRW A+KFPA + T + V+ QVGRTG +TP+AR+EP+HV G +SN T+HN Sbjct: 307 GYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTTISNVTIHN 366 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV----- 415 E+E+ L G V I RAGDVIP + + E V CP CG+ V Sbjct: 367 LKELEQHKLFEGCYVEISRAGDVIPYLERRITDHNGEKLYGEV--EACPCCGTKVVVVHG 424 Query: 416 ----ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT- 470 E EG C C ++ L + R +++ G+GD+++ L V Sbjct: 425 KKTKENPEGSRTEYCP-NTKCKDRQVAHLLYCTQRHVLNIKGLGDELVMDLYNAGVVDVT 483 Query: 471 -PADLFKLTAG---KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 P L L K+ ERM K A V A + R + ALGI + TA Sbjct: 484 RPLSLLMLKHEDFLKIGQSERMAEKLAMAVTIA---SANLDLTRVITALGISGAADGTAE 540 Query: 527 GLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 LA TLE + A+I+ + ++ D+G V A + FF E++ + G P Sbjct: 541 RLAREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFFDEDNRK-------PHGQSAWRP 593 Query: 587 IVIN-----AEEIDSPF-AGKTVVLTGS-LSQMSRDDAKARLVELGAKVAGSVSKKTDLV 639 V + E + + F G T V+TGS +R D + + GA V+ +V+K T V Sbjct: 594 YVGDRYLKAPEPLGTLFRPGTTFVVTGSKFGDKARKDLERWFKQNGATVSSTVTKSTTTV 653 Query: 640 IAG-EAAGSKLAKAQELGIEVI 660 G + KLA A+ELGI + Sbjct: 654 YCGTKYTAHKLATAKELGIPYV 675 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 225/679 (33%), Positives = 357/679 (52%), Gaps = 48/679 (7%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ EL + L Y+ + + EYD+ L LE K ++ SP+Q VG A Sbjct: 44 RMKELISFLNEAAKAYYQEGREIVSNLEYDKAYDTLLSLE-KESGVVLSGSPSQNVGYAV 102 Query: 67 LAAFSQIRHEVPMLSLD---NVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 A + HE PMLSLD +V D +SFL + + ++W KLDGL + + Sbjct: 103 ATALPKEAHETPMLSLDKTKSVEDLQSFLQGQEGI---------LSW----KLDGLTIVL 149 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y+ G L+ A TRG+G GE +T N +T + +PL++ L VRGE F+ + FE+ Sbjct: 150 HYQEGKLLKAVTRGNGIIGELVTENAKTFQNLPLQIP---FKGHLVVRGEAFISYSDFER 206 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GELPDTHLGR 242 INE+ G K + NPRN +GS+RQLDP++T +R + + + + E G+ PD H Sbjct: 207 INEELPEEGAK-YKNPRNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHNQH 265 Query: 243 LLQFK---KWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 +F+ K G V R + E+ +E +A + K+ P F DG+V+ N +A E Sbjct: 266 EEEFRFLEKQGFSVVHRKMVNAENIQEAVAEFSKL---MPKNDFPSDGLVLLYNDIAYGE 322 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG A+ PR A+AFK+ +E+ T + VE+ RTG I PVA PV + G +VS A+L Sbjct: 323 SLGRTAKFPRNAIAFKWQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTVVSRASL 382 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN E L L IGD++ + +A +IPQ+ E + + P HCP C + + V Sbjct: 383 HNITYCEDLALGIGDEITVYKANMIIPQI-----GENKTKSGNLEIPKHCPACQGETKIV 437 Query: 419 EGE--AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + + + CT C A+R + FVSR A++++G+ + +++ + + ++ DLF Sbjct: 438 KDKETKMLYCTNPH-CPAKRIKQFALFVSRDALNIEGLSEMTLEKWLGRGFIQEFPDLFS 496 Query: 477 LTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L + + G+E G KS + + +EKAK + R LY LGI +G + LA F Sbjct: 497 LEKYREEIIGMEGFGLKSFEKIQENIEKAKTSNLGRLLYGLGIEGIGVSNGRMLAEAFSQ 556 Query: 535 -LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 L A+ EE+ +V +G V+A + +F +E NR ++ ELL+ +H + +E Sbjct: 557 DPYKLMDATKEEILQVKGIGQVLADSIAEYFQKEENRRIVLELLS-ILH----LEKEEKE 611 Query: 594 IDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKLA 650 S +GK V+TG++ +R + + + G + + SVS+ TD +I + + SK Sbjct: 612 EKSGISGKHFVITGAVHHFPNRKALEEEIRKAGGQSSSSVSQNTDYLINNDSTSGSSKNK 671 Query: 651 KAQELGIEVIDEAEMLRLL 669 KA+ELGI +I E E L+LL Sbjct: 672 KAKELGIPIITEEEFLKLL 690 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 310 bits (795), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 212/676 (31%), Positives = 357/676 (52%), Gaps = 35/676 (5%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ + L + Y Y+ ++ P + D EYD+ + EL +LE +HP+LI +SPT R Sbjct: 4 EEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSPTFR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G+ F++ ++ PMLSL ++ + +F + ++ E + + E K+DGL++ Sbjct: 64 IGSFASEKFTKFVYQKPMLSLAKAYNYDDINSFINNIS-KIVPTENINFNIEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y+ G LV AATRGDG+ GED+T N+ I++IP ++ N LEVRGEVF+ + F Sbjct: 123 ALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLINYFN---DLEVRGEVFITKNDF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +KINE + AA+G+LRQLD I A+R L+ F Y + E + H Sbjct: 180 KKINESNNFANARN------AASGTLRQLDANIVAERNLSAFLYEIVEPEKHGIYYQH-- 231 Query: 242 RLLQF-KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L+F K P ++ + EE+ E + L +D DG+VIK+N L ++L Sbjct: 232 EALEFMKNLDFP-TNPFSKVVEIEELEESISDFAEIKNKLDYDADGLVIKLNDLQMWDKL 290 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ P+ ++AFK+ + + + D+ VGRTG IT +A + PV + V ATLHN Sbjct: 291 GKTSKFPKHSIAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLHN 350 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 + I+ + + I D+V I +AG++IP+V++ L E T+CP CGS + EG Sbjct: 351 HNFIKDMNININDEVNIIKAGEIIPKVIS--LKEEKNYVDYYKKATNCPSCGSQLVEFEG 408 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 CT C + ++ HF SR +++ G+G + K ++ D+F L Sbjct: 409 IVDQFCTNDE-CPDKNINNIYHFASRNCLNIVGLGLSTVKDFYPK-FIKNIKDIFDLHKY 466 Query: 480 -GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL-EA 537 +L L R N++N++E AK F++ ++ALGI+ +G+ A +A + E Sbjct: 467 RAELIKLPRYRDLKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAEL 526 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLA----EGVHWPAPIVINAEE 593 L+ ++ +LQ ++G + + F + +N+++++ L A EG A+ Sbjct: 527 LDDHNLLKLQNTKNIGPKIIESLIEFISSPANQDLLAFLDAIFNYEG---------KAKV 577 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I + +G T V+TG LS+ R + E V+ ++S KT ++AG AGSKL KA Sbjct: 578 ISTILSGYTFVITGVLSE-PRSHFVKLIEEHSGNVSSAISSKTSYLLAGSDAGSKLEKAY 636 Query: 654 ELGIEVIDEAEMLRLL 669 + G +VI+E + L+ Sbjct: 637 KTGTKVINEEQFYDLI 652 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 307 bits (787), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 224/679 (32%), Positives = 345/679 (50%), Gaps = 53/679 (7%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ EL L Y+ + D EYD L EL +LE K +I S TQ+VG Sbjct: 41 NRMKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLE-KETGVILNGSRTQQVGFE 99 Query: 66 PLAAFSQIRHEVPMLSLDNV--FDEESFLAFNKRVQDRLKNNEK-VTWCCELKLDGLAVS 122 ++ ++++H MLSLD DE + + L +E ++W KLDGL + Sbjct: 100 VASSLTKVKHTSRMLSLDKTKSIDE---------LTEWLGGHEGFLSW----KLDGLTLV 146 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + ++NG L A TRG+G TGEDIT N R I IP K+ E L VRGE + FE Sbjct: 147 LTFDNGTLTQAVTRGNGETGEDITMNARHIIGIPAKIPFE---GHLVVRGESLMKYKDFE 203 Query: 183 KIN---EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 ++N ED G + NPRN G++R LD ++TA+R + FF + + +G E ++ Sbjct: 204 RVNSLIED-----GSKYKNPRNLCVGTVRNLDSKVTAERNINFFAFNLVSADGYE-SNSF 257 Query: 240 LGRLLQFKKWGLPVSDRVTLCES--AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 R+ G V + S AE+V F E+D F DG+V+ ++ +A Sbjct: 258 AERIQWLNSLGFQTVYGVKVDSSVLAEKVAEF----EKDIVNNEFPSDGLVLMLDDVAYG 313 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG + APR +AFK+ + T +R++E+ RTG + PVA +PV + G VS A+ Sbjct: 314 RSLGETSHAPRNGMAFKWRDETADTTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRAS 373 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE- 416 +HN +++L L IGD + I +A +IPQV+ E + P CP+CG E Sbjct: 374 VHNVSIVKQLKLGIGDTLSIYKANMIIPQVL-----ENKTGSASAAIPEVCPICGEKTEI 428 Query: 417 RVEGEAVAR--CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + + V CT C A+ +HFV R AM++ G+ I+ V + +V +D Sbjct: 429 KTSDDDVETLFCTNKE-CPAKHIGRFEHFVQRDAMNIVGLSTATIETFVSEGFVKKYSDF 487 Query: 475 FKLT--AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L K+ +E G +S Q + A+E ++ T +R LYA+GI +G A + + A + Sbjct: 488 YHLDRFREKIVTMEGFGERSYQKMQEAVEASRHTEMSRILYAVGIPNIGRAASRLICAEY 547 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + A+E + EEL + +G V+A+ FFA E N ELL E + P ++ Sbjct: 548 PDVNAIEKLTAEELTAIDGIGEVLANDYVKFFANEDNLTEYHELLTE-LDIAEPEAVSE- 605 Query: 593 EIDSPFAGKTVVLTGSLS-QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKL 649 DSP AGKT V+TGS++ +R++ KA + +G KV+GSVS KT +I ++ +K Sbjct: 606 --DSPIAGKTFVITGSVNIWKNRNELKAYIESMGGKVSGSVSSKTSYLINNDSQSNSTKN 663 Query: 650 AKAQELGIEVIDEAEMLRL 668 A+ L + +I E E L Sbjct: 664 KTAKSLNVPIITEEEFREL 682 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 227/690 (32%), Positives = 342/690 (49%), Gaps = 62/690 (8%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+++E+ + EL T++ + Y+ DAP + D +YDRL EL LE + I SPTQ Sbjct: 1 MQNLER-MRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALE-RETGTILSSSPTQ 58 Query: 61 RVGAAPLAAFSQIRHEVPMLSLD---NVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 RV L + + +RH PMLS D +V D +L ++ V ++W KLD Sbjct: 59 RVSGEVLESLTAVRHSRPMLSADKCKSVADIHKYLGGHEAV---------LSW----KLD 105 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR--LEVRGEVF 175 GL + + YENG LV A TRGDG GED+T VR ++ +PL IP + LEVRGE Sbjct: 106 GLTLVLRYENGKLVQAITRGDGLQGEDVTHTVRIMKNVPLV-----IPCKEPLEVRGEGV 160 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYG-VGVLEGGE 234 + F +N T + +A+PRN AAGS+R+L+ +R L+F + + GG Sbjct: 161 ISWKEFHALNG----TLDEPYAHPRNLAAGSVRKLNAEEVRERGLSFMAFDLISDNLGGS 216 Query: 235 LPDTHLGRLLQ--FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 L L Q F G + E+ + + FY E PT DG++ + N Sbjct: 217 TKWETLRFLAQMGFTTVGYSILAAGASEEAVRQAMDFYQPKEYAYPT-----DGLIFEFN 271 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 LA LG AFK+P T R +E RTG I+ A + V + G Sbjct: 272 DLAYGRSLGATGHHENRMTAFKWPDTRYETKFRRLEVATTRTGMISLTAAFDDVVIDGTT 331 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V++A LHN D RL L GD + + +A +IPQ+ +E + P CP CG Sbjct: 332 VNHAYLHNLDNFTRLALGPGDTISVYKANMIIPQI-----AENKTKSGGCPLPDVCPCCG 386 Query: 413 SDVERVEGEAVARCTGGL--------ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 S + V + +GG C A+ HF S+ M++ G+ ++ + V+ Sbjct: 387 STL------VVRQSSGGTRQLYCENEACPARLVRKFVHFCSKTRMEIKGLDEQTLTTFVQ 440 Query: 465 KEYVHTPADLFKLTAGKLTGLER--MGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 +V DL++L K L+ G KS + NA+++ + T +F+ ALGI EVG Sbjct: 441 HGWVKNYGDLYELERHKEEILKTPGFGEKSFARLQNAVDERRTCTLNQFIAALGIPEVGR 500 Query: 523 ATAAGLAAYFG-TLEALEAASIEELQ--KVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 L FG + +A E A +++ ++ D G V+ +++ ++++E + L Sbjct: 501 HAGRILNRKFGGSWDAFERAILDQFDFTQLEDFGQVMNDNIYCWYSDEEEAKLWRPALNH 560 Query: 580 GVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLV 639 + + E ++PFAGKTVV TG L +RD + +L+ LGA+ A SVSKKTD + Sbjct: 561 -ITFLKEETTMPEAQNNPFAGKTVVATGKLENYTRDGIQMKLLSLGARPASSVSKKTDYL 619 Query: 640 IAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 I GE AGSKL KAQ LG+ + E + L++L Sbjct: 620 IVGENAGSKLTKAQTLGVTTLTEQQFLQML 649 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 199/503 (39%), Positives = 271/503 (53%), Gaps = 69/503 (13%) Query: 30 IPDAEYDRLMRELRELETKHPELITPDSPTQRV---------------------GAAPLA 68 + DA+YD L L+ LE +P L+TPDSPTQ V GAA + Sbjct: 41 LSDADYDALFVRLQLLEGSYPALVTPDSPTQTVGGGAGGGGGVKRAAAATTEAVGAAHVP 100 Query: 69 ----------AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 F H M S+D+VF A+ +RV+ L+ + T E+K+DG Sbjct: 101 ENAVAVATTEGFPPHTHAKRMQSIDDVFSTAEVDAWWERVEKGLEG-KPFTVSAEVKVDG 159 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LA+S+ Y +G L++ ATRGDG GED+T+NVRTI+ +P L G IP +E+RGEV+LP Sbjct: 160 LAMSLTYVDGQLMTGATRGDGRVGEDVTANVRTIKTVPQTLGGTVIPHLVEIRGEVYLPL 219 Query: 179 AGFEKINED----------ARRTGGK----------VFANPRNAAAGSLRQLDPRITAKR 218 F ++N + AR G K +FANPRNAA GSL+Q D AKR Sbjct: 220 EDFAQMNAEREANNAAWEAARAAGDKEKLKTLKKMPLFANPRNAATGSLKQKDSIEAAKR 279 Query: 219 PLTFFCYGVGVLEGGELPD------THLGRLLQFKKWGLP--------VSDRVTLCESAE 264 PL F +G+G ++G PD T Q + WG+P + R+ + Sbjct: 280 PLAFLAHGLGAVQG--WPDGVSPMATQEDFYRQLEVWGIPSVRRTPQSLGLRMAGLTTLT 337 Query: 265 EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFV 324 +V A + E R IDGVV+KV++LA + LG ARAPRWA A+KFP +E T + Sbjct: 338 QVHAVLAAMTEHRHDFSHQIDGVVLKVDNLAARVLLGSTARAPRWACAYKFPPEEVHTRL 397 Query: 325 RDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVI 384 +E QVGRTG +TP A +E V V G VS ATLHNA E+ R +R GD VV+R+AGD+I Sbjct: 398 LGIEVQVGRTGRVTPFAVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDII 457 Query: 385 PQVVNVVLSERPEDTREVVFPTHCPVCGSDV-ERVEGEAVARCTGGLICGAQRKESLKHF 443 P+V+ VLS RP E V P CP CG+ + + EG+ RC C AQ E L H Sbjct: 458 PEVLGPVLSLRPGGLPEWVMPEMCPSCGTRLGQEKEGDIDLRCPNQAGCPAQITERLIHV 517 Query: 444 VSRRAMDVDGMGDKIIDQLVEKE 466 +R A+D++G+G++ L + E Sbjct: 518 GARGALDIEGLGEEGALALTQPE 540 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 51/78 (65%) Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 EE + AG T+V+TG++ +R+ A+ + + G K GSVSKKT +V+AG AGSKLAK Sbjct: 833 EEPEQTLAGLTLVITGNIPGFTRESAQLAVEDRGGKATGSVSKKTSVVVAGTGAGSKLAK 892 Query: 652 AQELGIEVIDEAEMLRLL 669 A+ LGI VI E LL Sbjct: 893 AEALGIPVIPAEEFPALL 910 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 229/690 (33%), Positives = 342/690 (49%), Gaps = 55/690 (7%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E++ TT Y D E+ DAE+DRL+ ++ E + I P+ Sbjct: 37 EEEYQAAVTTALSAAKAYETTDVEEMNDAEFDRLLAKIASHEAANG--IEPEHDLHDTIG 94 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A + H PM SL+ E++ + F + E K+DGLA+S+ Sbjct: 95 HGGAGGGDVEHATPMKSLEKP-GEDAVIEFAAK---------HPKAVIEPKIDGLAISVR 144 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG +V AA RGDG TGED+T VR + +P ++ G+ EVRGE++L K Sbjct: 145 YENGKMVRAARRGDGYTGEDVTDRVRGVDGLP-EMAGD---GDYEVRGELYLNDENKAKA 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G FAN RN AG L + D +F Y + E + HL + Sbjct: 201 NAIRQAAGKAPFANARNGVAGMLNKQDGSYAGL--FSFAAYSTTIDEKAD----HLDSMQ 254 Query: 245 QFKKWGLPVSDRVTLCES---AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 Q + G + R L +S AE+ +A + +R L F +DG V+KVN+ A++ +LG Sbjct: 255 QLEGMGFTTA-RSLLPQSVLDAEDPMAAIAALGAERKGLNFLMDGAVLKVNTAAERAELG 313 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +RAP+WAVA+K+PA E+ T + D+E+ +G+TG ++ ARL PV V G +V A+LHN Sbjct: 314 EGSRAPKWAVAYKYPAVEEPTVIEDIEYNIGKTGRLSIRARLTPVEVDGSVVEYASLHNV 373 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 ++ +RIGD V +A D+IPQV R E ++ P+ CP C ++ Sbjct: 374 GHLQAADMRIGDTVSAYKANDIIPQVHLPRADLRDESSQPWQPPSVCPQCSEPFDK--ST 431 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRA-MDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + RC + R + + SR A +D++G+G I D L+EK+ V +DLF L Sbjct: 432 ELWRCHTPECSVSGR---ISYAASRDAGLDIEGLGGSIGDALIEKDLVKDVSDLFYLGED 488 Query: 481 KLT----------GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA 530 +L G +G K+A ++ +EKAK R + AL +R G LAA Sbjct: 489 QLAEVELGETSTGGTRTLGQKNAAKIMAEIEKAKSQPLNRVITALSMRFTGRTFGRRLAA 548 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 FGT+EAL+AA++ +L V +G A +H + N VI++L GV+ AP Sbjct: 549 EFGTMEALQAATVSQLANVEGIGQKKAEVIHEQL--KKNAPVIAKLREAGVNMGAPKAAP 606 Query: 591 AEEIDSPFAGK------TVVLTGS-----LSQMSRDDAKARLVELGAKVAGSVSKKTDLV 639 A +P K VV+TGS L +SR + + G K +GSVSK TDL+ Sbjct: 607 AAGAKAPKLTKPDGKPMNVVVTGSVKGSPLGSLSRSGVQELIEAKGGKASGSVSKTTDLL 666 Query: 640 IAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + GE SK KAQELGI ++ E +++ Sbjct: 667 VCGEPGSSKFLKAQELGIRIVTPDEFAQMV 696 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 255/765 (33%), Positives = 372/765 (48%), Gaps = 119/765 (15%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPE-----IPDAEYDRLMRELRELETKHPE------L 52 I ++L L + LR H+ LY+ + IP D +R + + E Sbjct: 102 IYEELVRLASDLRRHDALYYESEMARNSVGRIPPCSNDSNVRVAWAYKPRGTEDASETFF 161 Query: 53 ITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE---KVT 109 P PT + + H PMLSLDNV EE LA+ +R++ +L ++ +T Sbjct: 162 CRPRRPTPNDATRIVVDRVKRPHVRPMLSLDNVHREEELLAWLERIRKKLTVDDGPSSLT 221 Query: 110 WCCELKLDGLAVSILYENG-------VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 E KLDGL++S YE V A+TRGDG G+D+T V+ +PL L Sbjct: 222 ILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTLDWA 281 Query: 163 NI---------PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQ---- 209 ++ P LE+RGE+ LP F+ + + G FAN RNAA+G L + Sbjct: 282 SLVADPESYTHPKVLEIRGEIVLPTTVFQSLEGE-----GLAFANARNAASGILLRKESI 336 Query: 210 LDPRITA--KRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTL-------- 259 DP + + L F+ Y V +G + L R+L + +P VT Sbjct: 337 TDPVASQALREKLCFYAYDVAGDDGFTVSGVQLRRVLPTLGFRVPEPVAVTRLRLNNTTA 396 Query: 260 --CESAEEVLAFYHKVEEDRP------TLG-FDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 + +L ++H ++ R T G +D+DG V KV+ + LG RAPRWA Sbjct: 397 WNVNDIQALLKYHHSMQHHRQGKKTSQTYGDYDMDGAVHKVSESDLRIILGQSNRAPRWA 456 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER-LG- 368 +A KF +T + D+ QVGRTGA+TPVA L+PV +AGV+V ATLHN +++ LG Sbjct: 457 IAHKFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQVLGS 516 Query: 369 ---LRIGDKVVIRRAGDVIPQVVNVVL-----SERPEDTREVVFPTHCPVCGSDV--ERV 418 + V++RRAGDVIPQVV + S DT V FP CP CGS V + V Sbjct: 517 TTTIAKESSVLVRRAGDVIPQVVQRIAGTDAGSNNGFDTISVAFPETCPACGSPVVTDEV 576 Query: 419 EGEA-------VARCTG-GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 A V RC G C + S+ H VSR A+DV G+ + I QL+E ++ Sbjct: 577 NKTASKETAGQVLRCGGPQWNCTPRAVGSIAHAVSRDALDVTGLSEARIMQLIEAGFISR 636 Query: 471 PADLFKLTAG-----KLTGLERMGPKSAQN---VVNALEKAKETTFARFLYALGIREVGE 522 P+D+F L KL ++ GPKSAQN V N + K + +RF+Y+LGIR G Sbjct: 637 PSDIFALAKSPTQLEKLAEMDGWGPKSAQNLAAVANRIAK-NGISLSRFVYSLGIRFSGV 695 Query: 523 ATAAGLAAYFGTLE----ALEAASIEELQKVPD-----------------------VGIV 555 ++A +AA +G++E +EAAS +++V D +G V Sbjct: 696 HSSALIAAAYGSVEDFLKDVEAASTLPIKQVQDQESNDEQVQSFARLREETDITKGIGPV 755 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPA---PIVINAEEIDSPFAGKTVVLTGSLSQM 612 + + + + FA++ +E LA + A +V++ P VV TGS+S+M Sbjct: 756 LLNSL-DTFAQDQELVEAAESLASSILVLADDSAMVVSTLATTGPLQDMAVVFTGSISEM 814 Query: 613 SRDDAKARLVELGAK-VAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 SR +AK +GAK GS+SK T LV+AGE G KL +A++LG Sbjct: 815 SRSEAKKWAKVMGAKSTPGSISKLTGLVVAGEKGGKKLEQAEKLG 859 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 206/683 (30%), Positives = 339/683 (49%), Gaps = 41/683 (6%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPE----LITPD---SPTQRV 62 EL L+ + + Y+ + + D YD + EL + PE + D S ++V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 63 GAAPL--AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 + +H+ MLSL+ + E + R+ + NN + + + K+DG++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQ--YILQEKIDGVS 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L A TRGDG GE++T N I+ IP + NI +E+RGE+F Sbjct: 132 ISLYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTI---NIKENIELRGEIFFSLKL 188 Query: 181 FEKI-NEDARRTGG---KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 FE + NE + G K + PRN A+G L+ L L+ F Y V E L Sbjct: 189 FESLKNEFLDKQDGTKNKKWNTPRNKASGILKSL-KTTDESSWLSCFIYEVVSPENFNLK 247 Query: 237 -DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 L L+ + + LP + + E + + K E+D+ ++IDG+VIK+N L+ Sbjct: 248 TQKQLFDFLKIQGFNLPKFEFIENENLIENFITNF-KFEDDQR--DYEIDGLVIKLNDLS 304 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 + LG ++ ++A+KF + MT + D+ VGRTG IT A+L+ V + G + Sbjct: 305 LYDLLGKTSKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKA 364 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH-CPVCGSD 414 ATLHN + I+ + + IGDKV I +AG++IP+VV +V P++ + P CP C + Sbjct: 365 ATLHNYEYIKNIKINIGDKVYIEKAGEIIPRVVKLV---SPKNDQNYFSPIEFCPSCKNK 421 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + E C C ++ + LK+FVS+ M++ +G K I+ K +V D+ Sbjct: 422 LSWSENMLNQFCLNP-DCIEKKIQKLKYFVSKDGMEIQELGGKKIELFFAKGWVKKIEDI 480 Query: 475 FKLTAG--KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L L LE S +++ +E++K+ + + ALGI+ +G+ A L Sbjct: 481 YNLKNNYDDLLKLENFQEHSVNVLLHKIEESKDVYTWKLIAALGIKNIGKKLAKSLVKII 540 Query: 533 -----GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 L +L + +EL+K + G V + FFA + NRN+I L G + Sbjct: 541 FENDQKNLLSLLEFNYDELEKYDEFGSVKIESLKEFFANDENRNLIQFLDQNGF----EL 596 Query: 588 VINAEEIDS-PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 + E I S KT ++TG+L + RD K +++ G ++ S+SKK D +I G+ G Sbjct: 597 KMEKEIIQSTKLENKTFLITGTLEK-PRDFYKNLIIQNGGIISSSISKKLDYLIVGQNPG 655 Query: 647 SKLAKAQELGIEVIDEAEMLRLL 669 SK KA EL I++IDE + ++L Sbjct: 656 SKEKKAMELNIKIIDEEFLKKML 678 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 214/716 (29%), Positives = 340/716 (47%), Gaps = 101/716 (14%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL-----ITPDSP------- 58 L +R + Y + AP IPD YDRL+ LR L+ HP L TP+ P Sbjct: 35 LAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEADAT 94 Query: 59 -----TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCE 113 +R+GA +RH MLSLD + E ++ ++ + + Sbjct: 95 ASIPPAERLGAP-------VRHTRAMLSLDKCYGPEDLYSWTEKFEGEV--------LVM 139 Query: 114 LKLDGLAVSILYE-NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-------- 164 K+DG+A S+ Y+ G L AATRG+G+ GEDIT NV + +P +L Sbjct: 140 PKMDGVACSLRYDAEGKLFLAATRGNGSEGEDITVNVLEVEDVPQQLDPAAFAELPGPDG 199 Query: 165 --PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTF 222 PA +EVRGE+F+ + FE+ E ++NPRN AG+++ + T L+F Sbjct: 200 AAPA-VEVRGELFMKLSVFERYKEQ--------YSNPRNLTAGAIKHKERGKTKAYTLSF 250 Query: 223 FCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAE--EVLAFYHKVEEDRPT- 279 + Y L+G ELP T + + G V + C+ E+ A Y + R Sbjct: 251 YAYD---LQGTELP-TEREKFASLRALGFAVEE----CDFVPRGELQAAYERWSARRSAD 302 Query: 280 -LGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAIT 338 + ++IDGVV + + +A+Q ++G PRW++A+KF T + +V + V RTG IT Sbjct: 303 EIDYEIDGVVYRASEVAEQRRMGETGHHPRWSMAYKFQGDTGTTTLEEVLWSVSRTGTIT 362 Query: 339 PVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED 398 PVA +P+ ++G +++ A L N + + LGL G + + R G VIP V VV + Sbjct: 363 PVAIFKPIELSGAMIARAGLFNLNHFDELGLTAGAAIEVTRRGGVIPYVERVVTPGAEGE 422 Query: 399 TREVVFPTHCPVCGSDV---ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMG 455 T ++ P CP C S+ ++ +GE + C+ CG+ R L+HF + +D+ G G Sbjct: 423 TFDI--PKRCPACNSEAVRRKKRDGEFL-YCSKPEGCGSARLGELQHFA--KVVDIQGFG 477 Query: 456 DKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYAL 515 K++ Q V+ + +PAD + L L +R+G +SA+N+V ++ + FL +L Sbjct: 478 PKVVTQAVDAGLLSSPADFYTLRVEDLEEFDRLGRRSAENLVAQVDAHRRIELPIFLQSL 537 Query: 516 GIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 GI +G+ A LA F TL + S E L +V + +A + A R + + Sbjct: 538 GIDHLGKQNAVLLANEFRTLAGVRGVSREALLEVKGIKDAIADAL---LAGLETRAELID 594 Query: 576 LLAEGVHWPAPIVINAEEID-------------SPFAGKTVVLTGSLSQMSRDDAKARLV 622 L E V V++ E D GKT + TG+L +R A+ ++ Sbjct: 595 ALLEHV-----TVVDLPERDPEAEAEAAAAAAEGALGGKTFLFTGALEAFTRKQAQEKVE 649 Query: 623 ELGAKVAGSVSKKTDLVIAGEAAG---SKLAKAQEL-----GIEVIDEAEMLRLLG 670 G A VSK D ++ G G SK KA++L ++VI E + L ++G Sbjct: 650 ANGGVPASGVSKSLDYLVVGAGKGAKSSKQKKAEKLIDGGAALKVISEGDFLAMIG 705 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 227/694 (32%), Positives = 346/694 (49%), Gaps = 83/694 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++L E R Y H PEI DA +D L ELR L+ HP L RVG+A Sbjct: 30 EELAERIEKYRASYYAGH----PEISDAAFDALEDELRALDPAHPVL-------ARVGSA 78 Query: 66 PLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK---------------VT 109 L + + RHE+PM SL+ V E+ L + R + L + + Sbjct: 79 SLITEWEKARHEIPMGSLNKVVSEDELLGWVARCDEILVKDGHGDGGTGAAPPAPGSISS 138 Query: 110 WCCEL----KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP 165 +L KLDG+++ ++Y+ G LV A TRGDG GE IT+NV ++ IP ++ + Sbjct: 139 VAGDLFVAEKLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIREKG-- 196 Query: 166 ARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCY 225 RL VRGE+ L ++++ R G +PRN AAG+ ++ D + + F+ Sbjct: 197 -RLSVRGEIIL------RLSDMKRHFPG--VTSPRNMAAGAAKRFDGQGAEHCTVLFY-- 245 Query: 226 GVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED-RPTLGFDI 284 V + E+P T R ++ G T S E+V+ Y + + R L ++I Sbjct: 246 --DVADHLEIP-TCRARFAWLRELGFATPQ--TAHGSVEDVVKLYRRYSSELRAGLDYEI 300 Query: 285 DGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE 344 DG+V+ V+SL Q LG V R PR AVAFKF + ++T V +++ G +G +TPVA +E Sbjct: 301 DGLVVYVDSLHVQGLLGDVNRRPRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVAIVE 360 Query: 345 PVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF 404 PV +AG V A+LHN+ + LG+ +GD+V++ R DVIP V VV P V Sbjct: 361 PVELAGANVRRASLHNSANVRSLGIGVGDEVLVSRRNDVIPYVEEVVEKRGP----VAVP 416 Query: 405 PTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD-VDGM-----GDKI 458 P+ CPVC + + VEGE L+C R + + + R + +D + GDK+ Sbjct: 417 PSVCPVCSAPLV-VEGEY-------LLC---RNAACRALIEGRIHNWIDAIGALEWGDKL 465 Query: 459 IDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIR 518 I+Q+V V P DL+KLT + L+R G KSA + L+ FL ALGI Sbjct: 466 IEQVVAAGLVREPLDLYKLTVKSIADLDRRGEKSATKCLEQLKSRLPLALPVFLAALGIE 525 Query: 519 EVGEATAAGL-AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL 577 TA L +A + T+E L AA +EL +P +G + A+ + S+ I LL Sbjct: 526 GFAIQTARLLVSAGYTTIEKLLAAGEDELAGIPGLGAIKAASIVRGLRARSDE--IGRLL 583 Query: 578 AEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD 637 A G IV A E + P AG T TG+ ++ R + + G +V SV+K+ + Sbjct: 584 AAG------IVPVAPEAEGPLAGLTFCFTGAGAR-PRGELTHLVESSGGRVLNSVTKELN 636 Query: 638 LVIAGEAA--GSKLAKAQELGIEVIDEAEMLRLL 669 ++ + A SK KA++ G ++I E ++ +L+ Sbjct: 637 YLVIADVASTSSKAVKARKYGTKLITEDDLDKLI 670 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 211/684 (30%), Positives = 330/684 (48%), Gaps = 63/684 (9%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEI-PDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ EL L Y+ DA EI + EYD L EL+ LE + ++ SPT VG Sbjct: 6 RMNELIDILSKANKAYY-SDANEIMSNREYDELYDELQALE-EESGIVLAASPTVNVGYE 63 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCEL------KLDGL 119 ++ ++ HE MLSL+ K V +E V W E KLDGL Sbjct: 64 ASSSLEKMAHEKKMLSLNKT----------KSV------DELVEWLGEQEGLLSPKLDGL 107 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 V I Y+ G L A TRGDG GE IT N +T IPLK+ RL +RGE ++ Sbjct: 108 TVVITYDEGSLKLAVTRGDGVEGEVITKNAKTFIGIPLKIP---YAGRLVLRGEAYITYG 164 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-GVLEGGELPDT 238 F K+NE+ + NPRN +GS+R LDP IT +R + F + + G +E G Sbjct: 165 DFNKLNEEIDDAAK--YKNPRNLCSGSVRNLDPSITKERRVRFKVFSMLGGIEHG----- 217 Query: 239 HLGRLLQFKKWGLPVSDRVTLCE--SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 + + KW + V E + E + + + E+ +DG+V+ + + Sbjct: 218 -FNKKRECMKWLGDIGFDVVHTEMVTGENLKDTMNSLMEELQNGDIPVDGLVLTYDDIKT 276 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 LG A+ P+ ++AFK+ + T + VE+ RTG + PVA PV ++G V A Sbjct: 277 CNLLGETAKYPKDSIAFKWSDELYDTELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRA 336 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVV-NVVLSERPEDTREVVFPTHCPVCGSDV 415 LHN D ++ L L GDK+ + +A +IPQV N+ S E +P CPVCG + Sbjct: 337 ALHNLDILDGLALGKGDKIRVYKANMIIPQVYENITRSGNIE------YPKVCPVCGCGL 390 Query: 416 E-RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + EG V RC C A+ + + HF + +++ G+ +K I++L+ + DL Sbjct: 391 KLETEGARVLRCVND-DCPAKNAKRIVHFAGKSGINIKGISEKTIEKLIATGIIRNEVDL 449 Query: 475 FKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + K + L+ KS +N+ A++ AK T RF+ A+ +G A +AA Sbjct: 450 LDIENYKDEILKLDGFKEKSFENLKKAIDGAKTMTLQRFISAMAFTGIGYTNAGKIAAAL 509 Query: 533 G-TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL--LAEGVHWPAPIVI 589 G + L + E++ + +G V+ +F AE S+ N+ + + + + Sbjct: 510 GFDVMKLFELTPEKINNIEGLGEVLT---ESFMAELSDENMKRRMREIIKRCKFKEITRT 566 Query: 590 NAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAG 646 +E+D GK V+TG+++ +RDD K ++ G +V SVS TD +I E+ Sbjct: 567 RNDEVD----GKKFVITGNVNIFKNRDDLKQKIEISGGQVVSSVSSNTDFLINNDRESTS 622 Query: 647 SKLAKAQELGIEVIDEAEMLRLLG 670 SK KA+ELGI +I E ++ +LG Sbjct: 623 SKNKKAKELGIAIISEKDIAEMLG 646 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 254 bits (650), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 215/778 (27%), Positives = 357/778 (45%), Gaps = 132/778 (16%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR + + LY+ EI D EYD+L + L LE K + + T +VGA P++ + Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKFNQ----QTITNQVGA-PISDY 125 Query: 71 S-----QIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---------KNNEKVTWCCELKL 116 S + RH+ MLSL N + ++ +AF +++ L + +++ + ELK Sbjct: 126 SNNRGLKFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKY 185 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL-------- 168 DG+ +S++YEN L TRG+G GEDIT+N ++ IP + +P+ L Sbjct: 186 DGIGISLVYENNKLKRVLTRGNGEIGEDITTN--ALQFIPSLKNLLTLPSNLTVFILFLI 243 Query: 169 ------EVRGEVFLPQAGFEKINE-DARRTGGKVFANPRNAAAGSLRQ-----------L 210 E+RGEV L ++ + IN+ + N RN +G LR+ + Sbjct: 244 LKYKDFEIRGEVVLNKSYLKIINKLKLDNNDQHQYKNTRNIVSGILRKSIEEDANDSLNI 303 Query: 211 DP--RITAKRPLTFFCY---------------------------GVGVLEGGELPDTHLG 241 +P + + FF Y ++ E +T Sbjct: 304 EPILLLNEQMKFDFFPYFFIPTNNNNNNINNGENENENDNEKENDNEMIIDDERCNTQSK 363 Query: 242 RLLQFKKWGLPVSD----RVTLC-------ESAEEVLAFYHKVE-EDRPTLGFDIDGVVI 289 L F+K G + + VTL + + F + E + R +DIDG+VI Sbjct: 364 NLKLFEKMGFQIDNGSNTVVTLSTGGGGNNNDIKNIEEFIKEWELKKRENHNWDIDGIVI 423 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN + Q LG + R+PRWA A+KF A+ +++ ++D+ QVG++G ITPVA +EP+ V Sbjct: 424 KVNDINIQRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVEPIQVH 483 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV----------LSERPEDT 399 GV +S ATL+N I +L ++IG KV+I RAGDVIP+++ + + + Sbjct: 484 GVTISRATLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNTNNTNN 543 Query: 400 REVVFPTH------CPVCGSDVERVE--GEAVARCTGGLICGAQRKESLKHFVSRRAMDV 451 E +F + CP C E V G C C Q + + FV ++AM++ Sbjct: 544 IESLFKCNENGNILCP-CNLKSELVNRVGYVDYFCVAE-NCPNQLVQQISWFVDKKAMNI 601 Query: 452 DGMGDKIIDQLVEKEYVHTPADLFKLT--AGKLTGLERMGPKSAQNVVNALEKAKETTFA 509 G+G I L+E + + DL++L KL L+ N++ ++E +K A Sbjct: 602 QGVGKSQIQVLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSRGLA 661 Query: 510 RFLYALGIREVGEATAAGLAAYFGTLEAL-EAASIEELQKVPDVGIVVASHVHNFFA--E 566 L A+GI +G + + L+ F +L+ L + SIE ++ +G + + NFF + Sbjct: 662 SLLCAIGIPGIGSSNSKILSEKFQSLDNLINSPSIESIELQSGLGRQTSESIFNFFNPLD 721 Query: 567 ESNRNVISELLAEGVHWPAPIV-----------------INAEEIDSPFAGKTVVLTGSL 609 + + + L+ + + N E +S + K +V+TG Sbjct: 722 QFEKQYLDYLIFKFKSNNLKLTHNNNNDNNEEIGNNNNNNNNENNNSFLSNKYIVITGKF 781 Query: 610 SQMSRDDAKARLV-ELGAKVAGSVSKKTDLVIAGEA-AGSKLAKAQELGIEVIDEAEM 665 RD K + + AKV S++ T +++ GE A +KL KA ELGI++ E E+ Sbjct: 782 KLGDRDFVKDFIQRKFNAKVQSSINSFTQILLIGEKPAIAKLNKANELGIQIKSENEL 839 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/359 (40%), Positives = 208/359 (57%), Gaps = 20/359 (5%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR + + Y YH + P I D+ YD L+REL++LE+K P + +S T +VGA P Sbjct: 323 LRRVIADYSYQYHTLGNPLISDSAYDALVRELKDLESKLPAEASEESVTAKVGAPPPLEI 382 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK---NNEKVT---WCCELKLDGLAVSIL 124 +++RH VPMLSL V+ E+ A+++R+Q RL N E+ + W E K+DG+A+++L Sbjct: 383 AKVRHAVPMLSLAAVYKEDELKAWHERLQQRLNRMSNGEQPSTGAWVVEPKVDGIALTLL 442 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIP--LKLHGENIPAR---LEVRGEVFLPQA 179 YE G LV AATRGDG GED+T N R ++ +P L H + I + LEVRGEV++ Sbjct: 443 YERGKLVCAATRGDGAEGEDVTHNARNLKGVPEVLSDHHKEINLQESVLEVRGEVYMTLL 502 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-----GVLEGGE 234 F+++N+ + G K FANPRNA AGS+R L R R L+F Y + V G E Sbjct: 503 DFQELNDMKVKGGEKPFANPRNATAGSMRILKNRDGDDRRLSFMAYAILSPEDNVSAGVE 562 Query: 235 LPD----THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 P L K+ V+D S ++ L + + + R TL ++ DGVV K Sbjct: 563 TPPRLVRAQWDALNLLKQLDFSVNDDNRKFASFDDALHYATRWRDSRSTLKYESDGVVFK 622 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 +N LA Q +LG V PRWAVA+KF A E +T + +E +GR+GAI P ARL+ + V+ Sbjct: 623 INDLATQAKLGVVGSDPRWAVAWKFAATEVVTILEGIELSIGRSGAIIPNARLKDITVS 681 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 147/315 (46%), Gaps = 35/315 (11%) Query: 386 QVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVS 445 QVV V+ R + V P CP C ++ + + C C + +KHF Sbjct: 830 QVVQVLRELRSDHMHSWVPPDRCPFCNGELTVSKDNNITSCCNN-KCPGRHSRKIKHFAK 888 Query: 446 RRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKE 505 G+G I+ L E V PAD + L L+ L+ +G KSA +V A+E++K Sbjct: 889 TL---FKGLGPSILSDLEEAGMVVDPADFYALDVVSLSRLDGLGEKSAAKLVKAIEESKG 945 Query: 506 TTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFA 565 + ALGI VG A L +FG++E L AS EEL VP +G V AS +H++ Sbjct: 946 KALWELITALGIPSVGVTAAKLLEQWFGSMERLLVASREELLLVPGIGTVSASAIHDWCT 1005 Query: 566 EESNRNVISELLAEGVH--WPAPIVIN-----------------------AEE----IDS 596 + N ++S + G + P + N +EE +++ Sbjct: 1006 DPFNVQLVSSIKEAGFSPTFNDPEIENHAAGNALSDSASQTTTSKVRTTDSEESKGNVET 1065 Query: 597 P-FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQE 654 P GK VV+TG + SR+ + +V G ++ SV+ KT ++AG++ G SK+ KA + Sbjct: 1066 PRLQGKNVVVTGEFEEYSREQIEQLVVLNGGQLRKSVNSKTSFIVAGQSPGPSKMTKAAQ 1125 Query: 655 LGIEVIDEAEMLRLL 669 L + V+D + +LL Sbjct: 1126 LAVPVLDISSFQQLL 1140 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 204/685 (29%), Positives = 336/685 (49%), Gaps = 64/685 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT-PDSPTQRVG 63 E+++ +L T++ H+ LY+ PEI DAE+D L EL+ L+ ++ T P T+ Sbjct: 4 EKRILDLEKTIKKHQDLYYNAQ-PEISDAEFDALWDELKALDPQNKLFFTVPLESTE--- 59 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F++ H +PM S + D SF A+ ++ + + + K+DG ++ + Sbjct: 60 -----GFAKSEHIIPMGSQEKAADPPSFEAWALKMPFK-------EYIVQYKMDGASLEL 107 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLE------VRGEVFLP 177 YE G V A TRGDG G+DIT NV ++ + + PA +R EV + Sbjct: 108 QYEEGHFVRAVTRGDGKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIML 167 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCY-----GVGVLEG 232 ++ +K +D AN RNAA G +++ + + L F Y +G Sbjct: 168 RSIHQKYFKDK--------ANCRNAANGLMKKKNGELCEH--LNLFAYDAVQGSIGRPFT 217 Query: 233 GELP-DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G+ P T +L+ KK G + V C+S EV+ + V + RP+L +DIDG+VIK Sbjct: 218 GDAPFKTESEKLVWLKKAGFNCVE-VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIKN 276 Query: 292 NSLAQQEQLGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGA-ITPVARLEPVHVA 349 +++ ++ + RA P +AFKF +E +T ++++E+ +GA TP+A +EPV +A Sbjct: 277 DTIDPED----MKRARPEKQIAFKFSLEEAVTVLKEIEWS--ESGATYTPIALIEPVRLA 330 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G V A+L N + I+ L L+IG +VV+ + G++IP++ L+E P + +E+ +P C Sbjct: 331 GTTVKRASLANPNIIKALNLKIGSRVVVTKRGEIIPKI--EALAENPPNVKEIEYPDTCS 388 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 VCGS + E + C ++ ++S +D+ G +I +L E V+ Sbjct: 389 VCGSPLTN---EGTRLYCPNMSCPKLIHHRIEKWIS--VLDIRDFGITLIKRLFEMGRVN 443 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL- 528 + DL+ LT +L ++RMG SA+ V AL KE + F+ I +GE L Sbjct: 444 SITDLYTLTVEELAAIDRMGKLSAEKVYKALHSKKEISLTEFIAGFDIEGIGETMVEKLE 503 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESN-RNVISELLAEGVHWPAPI 587 A F L L AS + V G V++ H S ++ ++ L+ +G P Sbjct: 504 EAGFNDLNELLGASEADFANVYQFGQVLS---HTLVTNLSILKDEMTGLIDKGYIKIKPP 560 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAA 645 + + E + G + TG L+ M R A+A + E G V SV K ++ ++ Sbjct: 561 LTSEE--GAVLKGLSFCFTGELNTMKRAQAEALVKEKGGTVKSSVVKGLSYLVTNTPDSG 618 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLG 670 SK KAQELG +I E L L+G Sbjct: 619 SSKNKKAQELGTAIITEEAFLNLIG 643 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 204/690 (29%), Positives = 320/690 (46%), Gaps = 69/690 (10%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++++ EL + HH+ Y+ ++ +I D +D L EL L+ +P L S +Q Sbjct: 1 MSTAQRRVQELEKLILHHQDRYYNAES-DISDDAFDALWEELARLDPGNPLLKAIGSDSQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R + RH VPM S DEESF A+ K+ N + + KLDG++ Sbjct: 60 RDAV-------KKRHIVPMGSQHKAADEESFSAWAKK-------NALQAFLVQHKLDGVS 105 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE-----NIPARLEVRGEVF 175 + + YE G A TRG+G G+D+T+NVR +R L E N+P VRGEV Sbjct: 106 LELQYERGHFCCALTRGNGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVI 165 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-----GVL 230 + ++D R+ AN RN G L++ D R + L CY G Sbjct: 166 M--------HKDIHRSHYPTHANCRNTVNGILKRKDGR--GRTHLHIVCYDAVPGTPGKP 215 Query: 231 EGGELP-DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 G LP +L + G V+ C +A+EV+A ++ R L + IDG+V+ Sbjct: 216 FTGSLPFADETEKLAWLARQGF-VTVHSHRCANAQEVVALRSEIMRTRELLPYSIDGLVV 274 Query: 290 KVNSLAQQE-QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHV 348 K L Q+ QL P+ +AFKF QE +T +RDV++Q TP+ +PV + Sbjct: 275 KSTDLDFQDAQLP----RPKKQIAFKFSTQEAITTLRDVQWQTSGV-TYTPIGITDPVRL 329 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHC 408 AG V A L N + + +L L+IG V+I + G++IP++ +V + P +E+ PT C Sbjct: 330 AGTTVKRANLCNPNMLTKLCLKIGSHVLISKRGEIIPKIEALVST--PAHAQEIHIPTQC 387 Query: 409 PVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRR---AMDVDGMGDKIIDQLVEK 465 C + +E L C L H R +++ +G ++I +L E+ Sbjct: 388 TSCNTVLENSGSR--------LFCPNVNCPLLSHHRITRWIECLEIKHVGTELIQRLFEE 439 Query: 466 EYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 + V DL+ LT L +E +G +A+ ++ A+ KE F+ GI +GE Sbjct: 440 KKVRRIPDLYTLTCEDLIEIEHVGNATAKKILEAIHHKKEIALQTFIAGFGIEGIGETMG 499 Query: 526 AGL-AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 L A F TLE + A+ E L+ + G +A V A ++ + ELL G Sbjct: 500 EKLICAGFDTLEKVLHATTETLESIYQFGTELAKSVVTGIARV--KDDMCELLDRGF--- 554 Query: 585 APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 ++ ++ +SP GK+ +GSL R R+ LG V SV++ +I Sbjct: 555 -VRILAKQQAESPLRGKSFCFSGSLRNGDRATIH-RIRALGGVVRTSVTRDLSYLIFESL 612 Query: 645 A-----GSKLAKAQELGIEVIDEAEMLRLL 669 + KL K Q + +E+I E E RLL Sbjct: 613 SQPYRTAQKLKKEQGVALEIISEDEFCRLL 642 >UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schistosoma mansoni RepID=C1M1N3_SCHMA Length = 311 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 150/202 (74%) Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 +V+KV+ Q+ LGFVARAPRWAVA+KFPAQE T + +E+QVGRTGA+TPVARL PV Sbjct: 1 MVVKVDDRRLQQDLGFVARAPRWAVAYKFPAQEASTRLEAIEWQVGRTGALTPVARLAPV 60 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 V GV+VSNATLHN DE+ RL LR GD VVI RAGDVIP+V+ + + V P Sbjct: 61 SVGGVVVSNATLHNIDEVHRLDLRAGDTVVIYRAGDVIPKVMRRLDDDGHAARAPVALPD 120 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CPVC S V R EGE VARC+ GL C AQRKE+L+HF SRRAMD++G+G+K +D +V+ Sbjct: 121 ACPVCASAVVRPEGEVVARCSAGLFCPAQRKEALRHFASRRAMDIEGLGEKWVDLMVDAG 180 Query: 467 YVHTPADLFKLTAGKLTGLERM 488 +HTPAD+++L+A +L L RM Sbjct: 181 LLHTPADIYRLSAEQLLQLPRM 202 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 207/664 (31%), Positives = 303/664 (45%), Gaps = 74/664 (11%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 EL + +H Y PEIPDA YD L+R L++LE H EL+T RV A +A Sbjct: 15 ELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDH-ELVT------RVYAPAVAG 67 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 ++RH PMLSLD + E L + K+ +E E K DG++ + ++ V Sbjct: 68 SGKVRHLRPMLSLDKAYSLEEVLEWAKK----FARSEDEELLVEPKYDGISAN--FDGRV 121 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 L +TRGDG GE+IT + + L+ G VRGE+ + F+ + R Sbjct: 122 L---STRGDGELGENITDKLPLVE---LETAGHTGKVDRPVRGELVIRDDDFKTLYSHIR 175 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 + GG V+ N RNA AG + G+ E E+ LQ K Sbjct: 176 KKGGGVYKNSRNAVAGIM--------------------GLKEIAEME-------LQGAKI 208 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 L + V+ E+ A + ++ L + DG+VIK+ A LG A PR Sbjct: 209 TLVDYNLVSFRVKYSELAAKWEELRRQLEALPYPQDGIVIKLADSAYSASLGNTAHHPRG 268 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 +AFKF + T + VE+ G+ +TPVA LEPV ++G + ATLHN I LG+ Sbjct: 269 EIAFKFTNIRRETRLIGVEWSFGKN-CLTPVAELEPVEISGTTIRRATLHNIQNILELGV 327 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 +IGD V + RAGDVIP +V S P + R CP CG+ + R E C Sbjct: 328 QIGDTVTVERAGDVIPYIV----SSTPGEERRSPLIEDCPSCGAKLVRRGPEL---CCPN 380 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 C + + L V R + ++ +G+ + +L+E V DLF+LTA L L+ Sbjct: 381 PECPETQLQRLAAAV--RNLGIERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGFA 438 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 KSA N++ ++KA+ + L AL I +G A A + L S EEL + Sbjct: 439 AKSAANLIEEIQKARIVNDYQLLAALNIPNIG-ANVAKVIFSHTDFAGLRRMSEEELSAI 497 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLA--EGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 P +G A + + A +S + ELL +H AP A EI TV TG Sbjct: 498 PGIGPERAKALVSELAAQS--EYLDELLGAVRLIHAAAP----AAEI------PTVCFTG 545 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKAQELGIEVIDEAEM 665 + + R + G + A V+ L++A + A KL KA LG++V+ E Sbjct: 546 KMPE-KRSYYEKLATAHGYRSADDVTSSLSLLVAADPAENSGKLKKAARLGVKVVSLDEF 604 Query: 666 LRLL 669 L +L Sbjct: 605 LSML 608 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 201/663 (30%), Positives = 308/663 (46%), Gaps = 63/663 (9%) Query: 30 IPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEE 89 + D E+D +L++LE + +I PDSPTQ V A +A + HE P LSL Sbjct: 27 MTDYEWDAAFDKLKKLE-EETGIILPDSPTQNVSADNVAGKKE-EHEFPALSL------- 77 Query: 90 SFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNV 149 A K+V+D K E KLDGL + + Y+NG L TRG+G G +IT Sbjct: 78 ---AKTKKVEDLAKWAENKPIWLSWKLDGLTLVVTYDNGKLTKVVTRGNGHIGTNITHLS 134 Query: 150 RTI----RAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 I + IP K H L +RGE + FE+ N +A +ANPRN A+G Sbjct: 135 TAIDGILQTIPYKGH-------LVIRGEAVISYPDFEQFNMEAEEE----YANPRNLASG 183 Query: 206 SLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCE-SAE 264 SL D R L + + + E E ++ GR+ + G V DR + + + Sbjct: 184 SLTLKDINEVKARHLRWIPFTLVYTE--EEINSWGGRMEWLEHQGFRVVDRELIEQPTVN 241 Query: 265 EVLAFYHKVEE-----DRPTLGFDIDGVVIKVNSLAQQEQLGFVA-RAPRWAVAFKFPAQ 318 + A H E + +DG+VI A R AFK+ + Sbjct: 242 NIEAVIHHWTERVTGVSSSPFPYPVDGLVISYEDTVYAATGSVTGHHATRAGYAFKWQDE 301 Query: 319 EQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL-RIGDKVVI 377 T + +E+ + I+PVA P+ + G V A+L N E ERLG+ G K+ + Sbjct: 302 SAETELDYIEWSCAAS-TISPVAVFRPIELEGTTVKRASLCNISECERLGIGDKGTKIAV 360 Query: 378 RRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE----RVEGEAVARCTGGLICG 433 +A +IP+V+NV+ E P CPVC S E V G CT C Sbjct: 361 IKANKIIPKVINVI-----ESVGTFHIPETCPVCHSATEVSESEVSGTRTLHCTNTH-CP 414 Query: 434 AQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKLTGLERMGPK 491 A++ + FVS+ +++DG+ ++ + + + +V ADLF LT A +L +E G K Sbjct: 415 AKQLKKFGRFVSKEGVNIDGLSEQTVQKFINLGWVREYADLFHLTEHATELRTMEGFGNK 474 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE----ALEAASIEELQ 547 S ++ A+EKA+ R L+AL I VG+ L + + E A+E+A+ + Sbjct: 475 SVTKLLAAIEKARNVEARRLLFALNIPLVGQDVCNRLLSAYPLEELIKTAIESAAEDVFS 534 Query: 548 KVPDVGIVVASHVHNFFAEESNRNVISELLAE-GVHWPAPIVINAEEIDSPFAGKTVVLT 606 + +G ++ + + N++++ LLAE V P+ +A DS G T V+T Sbjct: 535 TIAGIGPEKSASFVRWMKDTDNQSMLQHLLAELNVSQPS----SAPTGDS-CQGLTFVVT 589 Query: 607 GSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKAQELGIEVIDEA 663 G + +R++ KA + G KV GSVSK T+ +I E+ K KA+EL I +I E Sbjct: 590 GDVHHYKNRNELKAYIESQGGKVTGSVSKSTNYLINNDVESTSGKNQKAKELSIPIISED 649 Query: 664 EML 666 E + Sbjct: 650 EFI 652 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 207/683 (30%), Positives = 313/683 (45%), Gaps = 82/683 (12%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR---V 62 +++ L L +H +LY V + EI D YD L +EL EL ++PE+ R + Sbjct: 8 ERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDFYNRPVPI 67 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 +R E PMLSL E F LK + + E KLDGLA+ Sbjct: 68 HEPSGETIQPVRFEEPMLSLKKALSVEEADTF------LLKFPDGTNFFYEEKLDGLALE 121 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNV---------RTIRAIPLKLHGENIPARLEVRGE 173 ++YE G LVS +TRG G GED+T ++ RT+R +P + + RL +RGE Sbjct: 122 LVYEQGQLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQG--DRLVIRGE 179 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQL--DPRITAKRPLTFFCYG----V 227 ++ F+ +NE TGGK +NPRNA +G +R L + R + L F Y + Sbjct: 180 GYISLERFDSLNE----TGGKR-SNPRNAVSGWVRSLPQNQREDIRGTLYFAAYYASDRL 234 Query: 228 GVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 G EL LG L F G+P ES + + ++ RP +DG+ Sbjct: 235 GTKAYSELRQVLLG--LGF---GVP--------ESRDWIAVSENRRGNIRP-----VDGI 276 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 VIKV+ +Q+ G ++ P WA+A+KFPA+E + V + R G + PV + PV Sbjct: 277 VIKVDKFKEQDASGNGSKFPHWAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVT 336 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 + GV+ +A+L N LGL IGD++VI R DVIP++ V E + + PT Sbjct: 337 IQGVICQSASLDNYGSFMDLGLSIGDRIVITRNNDVIPRLNRV---EECGEGDLLEAPTS 393 Query: 408 CPVCGSDVERVEGEAVAR--CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP C S +E V G + C C AQ + +DVDG+G + +LVEK Sbjct: 394 CPSCDSLLEVVVGRDSSELVCNNVAECPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEK 453 Query: 466 EYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 +V PAD+ L G + + P + + + L++ RFL ALGI ++G A Sbjct: 454 GWVKQPADILTLPEG--IKDQCLTPTTRRGLERVLQEP--VPLHRFLKALGIPDIGITLA 509 Query: 526 AGLAAYFGTLEALEAASIEE-------LQKVPDVGIVVASHVHNFFAEESNRNVISELLA 578 LA A+ IEE LQ V V + +A V N F ++ L Sbjct: 510 KRLA------NAIPEGKIEESLTNPKFLQSVRGVSVGIAYRVVNAFDSPVFKDNFHALKG 563 Query: 579 EGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDL 638 ++ + + V +TG++ SR + + G +++ +++ Sbjct: 564 ---------LLTLQYTGTQDDCIKVCITGNIGP-SRGELCNLFAKEGIELSDRLTQDCAF 613 Query: 639 VIAGEAAG-SKLAKAQELGIEVI 660 VI G+ G SKL A E GI ++ Sbjct: 614 VIVGDRPGKSKLLIATESGIPML 636 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 188/688 (27%), Positives = 306/688 (44%), Gaps = 59/688 (8%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I+ ++ EL +L Y+ +P+ E+D + EL +LE K I DSPTQ G Sbjct: 6 IKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLE-KETGYIRHDSPTQNAG 64 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 A ++ HE P LSL A K +++ K + KLDGL + + Sbjct: 65 YEAEAG-NREPHEYPALSL----------AKTKSIEELKKWAGDMPIWLSWKLDGLTLVL 113 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR--LEVRGEVFLPQAGF 181 Y+ G LV TRG+GT G +IT I P + IP + + VRGE + F Sbjct: 114 TYDGGRLVKILTRGNGTVGSNITFLQDAISGFP-----KEIPYKGHMVVRGEATISYTDF 168 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + +N D + +ANPRN A+G+L D +R + F+ + + ++ + Sbjct: 169 KLLN-DTIEDDDEKYANPRNLASGTLNLDDVEEVKRRHVVFYAFTLVHIDDDIISWGDRM 227 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K+ + + E V + VE R + +DG+VI + A Sbjct: 228 SYLSDMKFNVVKREATDAAGLDEAVKRWTRDVESGR--MDVPVDGLVICYDDTAYAAGGS 285 Query: 302 FVAR-APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 A R AFK+ + T +R +E+ I+PVA EPV + G VS A+L N Sbjct: 286 VTGHHATRAGFAFKWQDEAVDTRLRYIEWSCA-VSTISPVAVFEPVQIEGTTVSRASLCN 344 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD----VE 416 EIERLG+ + + +A +IP+ + V + EV P CPVC V Sbjct: 345 LTEIERLGVGKECTLSVIKANKIIPKCIAV-----KDAVGEVEIPKECPVCHHPTRIFVS 399 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + G CT C A+ + FVS+ MD+DG+ + + + + + ++ D++ Sbjct: 400 KNSGVKTLHCTNP-DCTAKNVKKFSRFVSKSGMDIDGLSVQTMLKFINEGFIKQFPDIYH 458 Query: 477 LTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA---AY 531 L K++ +E G KS N+ A+EK++ ++AL I +G + + Sbjct: 459 LPEHFDKISSMEGFGEKSCMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGKKIVNAIGF 518 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 G + + A+ + + +G + + ++A N + L+ E ++ Sbjct: 519 DGFADRMRNAT--DFVDIDGIGQEKSGSILEWYANPQNSTMFEALIKE---------LDI 567 Query: 592 EEID------SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG-- 642 E++D GKT V+TG + +R + KA + G KV GSVSKKTD ++ Sbjct: 568 EKVDIKDMSEGSLNGKTFVITGDVHDFANRSEFKAYVESQGGKVTGSVSKKTDYLVNNDT 627 Query: 643 EAAGSKLAKAQELGIEVIDEAEMLRLLG 670 E+ SK KA+ELGI +I E + + G Sbjct: 628 ESTSSKNKKAKELGIPIISEDTFIEMFG 655 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 189/655 (28%), Positives = 298/655 (45%), Gaps = 84/655 (12%) Query: 28 PEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFD 87 P I DA YD L+ LRE+ H L V A A ++RH PMLS + +D Sbjct: 33 PMISDAHYDLLVERLREIAPDHGFL-------SAVEAETFADKREVRHPAPMLSTEKAYD 85 Query: 88 EESFLAFNKRVQDRLKN--NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 ++S F +RV V + KLDGLA ++G ++ ATRG+G G DI Sbjct: 86 KQSLERFVERVYKEAAQIGVTDVLFQVTPKLDGLAAR---DDGQIL--ATRGNGYAGYDI 140 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 T N IP G + GE+ Q+ F++ D F +PRN G Sbjct: 141 T-NALEKGVIPQGGRGLGL-------GEIVAVQSYFQENLADR-------FEHPRNMVVG 185 Query: 206 SLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEE 265 + I+AK+ L E H KW S +E Sbjct: 186 IISSDVLNISAKQAL-------------EDKQVHFVPYATLNKWE----------GSGKE 222 Query: 266 VLAFYHKVEEDR-PTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFV 324 +L K+ +D + +DG+V V + ++ +G + RW +A K + +T V Sbjct: 223 LLENSEKITQDLIQATDYPMDGMVASVMNQDVRDHMGATSHHYRWQIAIKAKGETGVTTV 282 Query: 325 RDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVI 384 + +QVGRTG +TPV +EP+ ++G + T HNA I G +G + + R+G+VI Sbjct: 283 NAITWQVGRTGNVTPVLEVEPLKLSGATIRRVTAHNAGRIREKGAGVGASIEVIRSGEVI 342 Query: 385 PQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV 444 P++ NV+ P D + + P +CPVC + +E +C L C A+ ++ ++H+ Sbjct: 343 PKLENVLT---PSD--DTLIPENCPVCETPLEW--NNDFLKCP-NLNCKARVEQRIRHWF 394 Query: 445 SRRAMDVDGMGDKIIDQLV-------EKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVV 497 R + D G K +++LV EK Y T D L GP ++N+ Sbjct: 395 -RILGNADWFGIKTVERLVAGGFDSLEKIYAMTEEDFLSL---------EFGPVQSKNLA 444 Query: 498 NA--LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 A L K++ RFL A GI ++GE + + ++F LE L + +++ + G V Sbjct: 445 EAINLSKSRPVEDWRFLAAFGISDLGEGDSRKILSFF-PLEELLDKTRDDIVALHGFGDV 503 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRD 615 + + ++ I +L G + + + ++ SP +GK VV TGS+ SR Sbjct: 504 TSISIEKGL--KALGPTIRHMLDLGFNLQPTPLKSEMDVSSPISGKGVVFTGSMETGSRK 561 Query: 616 DAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAEMLRLL 669 D + LGA V +V+ KTD +I G G+ K KAQ+LG+ V+ E E L+L+ Sbjct: 562 DMEENARSLGANVQKAVTGKTDYLICGAKVGAKKTQKAQDLGVTVLTEQEYLQLV 616 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 193/661 (29%), Positives = 299/661 (45%), Gaps = 92/661 (13%) Query: 28 PEIPDAEYDRL-MRELRELETKHPEL--ITPDSPTQRVGAAPLAAF--SQIRHEVPMLSL 82 P +PDA YD L + L E + +HP L + P+ AF ++H+ PMLS Sbjct: 49 PLVPDAVYDHLFIATLSEKDPEHPFLKAVEPEG----------EAFEGDTVKHDTPMLST 98 Query: 83 DNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLAVSILYENGVLVSAATRGD 138 D + E+ F RV+ + +E +T+ KLDG+A + +G LV TRG+ Sbjct: 99 DKAYTEDELRRFLGRVEVAAEALGIRSETLTFRMTPKLDGIA-GMQRPDGRLV---TRGN 154 Query: 139 GTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFAN 198 G G DI+ P G P GE+ L + F+ ++ R G + Sbjct: 155 GFAGADISHAFERGLRTP---DGSMEPGP----GELVLEEMFFQ---DEIRVAFG--MPH 202 Query: 199 PRNAAAG-----SLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPV 253 PRN AG +++ + + + FF Y Q W Sbjct: 203 PRNFVAGFVGADTVKPHHQKAADAQAIIFFPY------------------RQLPAWQ--- 241 Query: 254 SDRVTLCESAEEVLAFYH-KVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 SA V+A + ++E R + + DGVV++V + +G + RW VA Sbjct: 242 -------ASAAVVMASWQERMEALRQAVPYRTDGVVLEVTDETVKAHMGSTSHHHRWRVA 294 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 K + VRD+ Q GRTG ITPV +PV + G +SN T H A + + GL +G Sbjct: 295 LKTKGEVAHVRVRDIRIQTGRTGRITPVLEFDPVLLTGARISNVTAHTAANLAQQGLGVG 354 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 ++ I RAGDVIP++ V+ E E + THCP CG + E VEGE A C + C Sbjct: 355 AEIEISRAGDVIPKLERVL-----EPASEPMTVTHCPSCGHEAE-VEGE-YAVCPNTVGC 407 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS 492 AQ + L+HF + D G K ++ LVE + LF L A + GP Sbjct: 408 LAQAEARLRHFFHVMG-NADLFGPKTVEVLVENGHTDLRG-LFDLNAVAFVSMG-FGPGQ 464 Query: 493 AQNVVNALEKAKETTFA--RFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 A N+V L + RFL ALG+R +G + L A + LE++ + E++ V Sbjct: 465 ASNLVRELARCLREAVPDWRFLAALGLRHLGRGDSRKLLAVY-PLESITNLTAEDIAAVE 523 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAGKTVVLTGSL 609 G + ++ + E+ R I ++ G + P+ + P AG+++V TG+L Sbjct: 524 GFGPITSASIAEQLQEQRER--IEAMIRLGFNLERTPLAGEGAAAEGPLAGQSIVFTGTL 581 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-------IEVIDE 662 + SR + + + LGA + V+ KT +++ GE AGSK KA+ + + ++DE Sbjct: 582 TLGSRGELEEQARGLGATIQSGVNSKTTILVCGEKAGSKRKKAEAINEKAGKEQVRILDE 641 Query: 663 A 663 A Sbjct: 642 A 642 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 199/664 (29%), Positives = 298/664 (44%), Gaps = 93/664 (14%) Query: 27 APEIPDAEYDRLMRELRELETKHPELITPD-SPTQRVGAAPLAAFSQIRHEVPMLSLDNV 85 AP + DAEYD L+ LR + HP L T + P G A ++RH PMLS + Sbjct: 18 APIMSDAEYDALVERLRREQPDHPYLQTVEPEPENIFGGA------KVRHHAPMLSTEKA 71 Query: 86 FDEESFLAFNK---RVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTG 142 + E + + R RL +E V + KLDGLA S +GV ATRG+G G Sbjct: 72 YTESDLIRYFSAVTRQAARLGMDE-VIYAMTAKLDGLAGSRDRAHGV--DLATRGNGLQG 128 Query: 143 EDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNA 202 EDI A LK+ G ++ + GE+ +P+ FE E G F +PRN Sbjct: 129 EDIGKAF----ARGLKIVGADV----DGPGEIVMPKDFFE---EHLVPLG---FKHPRN- 173 Query: 203 AAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG--LPVSDRVTLC 260 + VG + D H RL++ +P ++ Sbjct: 174 ----------------------FMVGFVGADTEKDHH--RLVKESGMAHFVPYANLPRFY 209 Query: 261 ESAEEVLAFYHKVEED-RPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 + +L + ED R +D DG+VI+V + LG RW +A+K + Sbjct: 210 ADKDTILRDIAYISEDIRKNTPYDTDGIVIEVEEPELRAALGSTNHHHRWQIAYKTKGET 269 Query: 320 QMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRR 379 T V V +Q GRTG ITPV ++PV ++G + AT HN + + GL +G +V + R Sbjct: 270 AETTVTGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKARKDGLGVGSRVTMIR 329 Query: 380 AGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKES 439 +G+VIP +++ VLS P D PT CP C VE +GE + C C AQ + + Sbjct: 330 SGEVIPFIMD-VLSPAPLDV-----PTACPCCNGPVEE-DGEYLT-CVNPH-CEAQAEGA 380 Query: 440 LKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNA 499 + HF DG G K ++++V A + +T G+ GP A+N+ Sbjct: 381 ISHFFKIMGT-ADGFGPKAVEKIVAAGITDILA-VLDMTRADFEGMG-FGPGQAENLERE 437 Query: 500 LEKAKETTFA--RFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVA 557 +++ T RFL A GIR +G + L G L+AL + ++ + Sbjct: 438 MKRCMSTPVEDWRFLAAFGIRYLGRGDSKALLCAIGGLDALNGITPAQIMAI-------- 489 Query: 558 SHVHNFFAEESNRNVISELLAEGV-------HWPAPIVINAEEIDS---PFAGKTVVLTG 607 + FAE++ + +L + AP+V +A D P AG ++V TG Sbjct: 490 ----DGFAEKTALCIAHDLTWRWMEIEAVRDRMEAPLVSSAPAGDIGTLPLAGMSLVFTG 545 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEML 666 + S+ R+ + + LGAKV V+ KT +++ GE G SK KA LG V EAE L Sbjct: 546 TFSK-DREVMETQAEALGAKVQSGVNGKTSVLVIGEKPGASKTTKAAALGTPVWTEAEYL 604 Query: 667 RLLG 670 +G Sbjct: 605 LRIG 608 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 196/692 (28%), Positives = 308/692 (44%), Gaps = 88/692 (12%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+ + D E+D L+ LE + E++ P+SPT V A L + HE P LS Sbjct: 23 YYNGKGEAMTDFEWDAAFDRLKALEEELGEVL-PNSPTNSVSADKLKGQKE-EHEYPALS 80 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTT 141 L E + + E+ W KLDGL + + Y+NG L TRG+G Sbjct: 81 LAKTKSETELAKWAE---------ERPIWL-SWKLDGLTLVVTYDNGKLTKVVTRGNGHI 130 Query: 142 GEDITSNVRTIRAI--PLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANP 199 G +IT I I +K +G + +RGE + A FE+ N ++ +ANP Sbjct: 131 GTNITHLAAAIDNILPTVKANG-----HIVIRGEAVISYADFEQFNLESEEE----YANP 181 Query: 200 RNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDR--V 257 RN A+GSL D R L + + ++ E + R+ K G +R + Sbjct: 182 RNLASGSLTLKDINEVKARHLRWIPF--SLVHTDEEIISWGDRMAFLDKLGFNTVERELI 239 Query: 258 TL--CESAEEVLAFYHKVEED---RPTLGFDIDGVVIKVNSLAQQEQLGFVA--RAPRWA 310 TL E+ E+V+A + D + + +DG+VI + + G V A R Sbjct: 240 TLPTAENIEKVIATWTLRVTDTTRKDKQPYPVDGLVITYDD-TEYAATGSVTGHHATRAG 298 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL- 369 AFK+ + T + +E+ T I+PVA +PV + G V A+L N E ERLG+ Sbjct: 299 FAFKWQDESVETTLEYIEWSCA-TSTISPVAVFKPVELEGTTVKRASLCNISECERLGIG 357 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA----VAR 425 G K+++ +A +IP+V++V E PT CPVC + VE EA Sbjct: 358 DAGTKLMVIKANKIIPKVISVT-----ECLGSFTIPTTCPVCHQPTQIVESEASGTRTLH 412 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TAGKLT 483 CT C A++ + FVS+ +++DG+ ++ + + + +V ADLF L A L Sbjct: 413 CTNHH-CPAKQLKKFARFVSKEGINIDGLSEQTVQKFINLGWVSEYADLFHLQEKAEALK 471 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 +E G KS N++ A+EK+++ + L+AL I VG+ L L A + Sbjct: 472 YMEGFGEKSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCTRL---------LSAYPL 522 Query: 544 EELQKVPDVGIVVASHVHNFFAE--ESNRNVISELLAEGVHWPAPIVINAEEIDSPFA-- 599 EEL +V + + F E +N + S + G A V ++ DS +A Sbjct: 523 EELINKSRENMVSPTLQRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQD-DSNYAQL 581 Query: 600 ----------------------GKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKT 636 G T V+TG + +R++ KA + G KV GSVSK T Sbjct: 582 QRLLQELTVSQTSSEPKGNLCQGLTFVITGDVHHYKNRNELKAYIESEGGKVTGSVSKST 641 Query: 637 DLVIAGE--AAGSKLAKAQELGIEVIDEAEML 666 +I + + K KA+EL I ++ E + + Sbjct: 642 HYLINNDVKSTSGKNKKAKELNIPILSEDDFM 673 >UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R767_PLAYO Length = 354 Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 93/167 (55%), Positives = 123/167 (73%), Gaps = 1/167 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ +LR + H Y+ +D P I DAEYDRLM EL +E ++PEL+TPDSPTQRVGA Sbjct: 189 EKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVGAP 248 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ AF+++RHEVPMLSL+N F EE AF++RV+ L + + + + E KLDGLAV++LY Sbjct: 249 PVEAFTEVRHEVPMLSLENAFSEEDLTAFDRRVRKEL-SRDTLEYVAEPKLDGLAVNLLY 307 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 ++GVLV AATRGDG GED+T NVR +RAIPL+L GE+ P R E G Sbjct: 308 QDGVLVRAATRGDGEVGEDVTHNVRAVRAIPLRLKGEDFPDRFEGAG 354 >UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN Length = 649 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 184/663 (27%), Positives = 300/663 (45%), Gaps = 95/663 (14%) Query: 30 IPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEE 89 I D+ YD + E HP L+T V LA + MLS D + Sbjct: 60 INDSTYDAFLSEFSTYNPDHPYLLT-------VEPEVLADSKTVPLPKKMLSTDKAY--- 109 Query: 90 SFLAFNKRVQDRLK-------NNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTG 142 SF K + LK + ++ KLDG A Y++G+ S TRGDG G Sbjct: 110 SFEEIKKWIDRLLKAAIEVGVSESEIQIKVTPKLDGYAA---YDDGI--SLYTRGDGARG 164 Query: 143 EDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNA 202 +DIT RA L N R GE+ + ++ F+ + D F N RN Sbjct: 165 QDIT------RAFNKGLQVANNGDRGLGPGEIVIKKSYFDTVLSDK-------FENSRNI 211 Query: 203 AAGSL--RQLDPRITAKRPL---TFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRV 257 A + +++D I + FF + L + W Sbjct: 212 QAAIIAEKKVDESIQKAIDVGACVFFPF------------------LSLENW-------- 245 Query: 258 TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPA 317 + E ++ F VE+ + +DIDGVV++V + +E +G RW +AFK A Sbjct: 246 -IGHYTEILVDFESIVEKMWSAVDYDIDGVVLEVTNETLKEHMGATRHHHRWQIAFKVNA 304 Query: 318 QEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVI 377 + V +V Q RTG +TPVA LEP ++G +S AT+H+ + ++ G+ G V + Sbjct: 305 ESAEVKVLNVTPQTSRTGRVTPVAELEPTKLSGATISRATVHHYNMVKTNGVGPGAIVQL 364 Query: 378 RRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRK 437 R+G VIP++ V+ + P+ +E CP CG+ + V C C AQ + Sbjct: 365 VRSGLVIPKIEKVIKAVEPQLAKE------CPSCGTHLIWESDHLV--CPNKTDCPAQTE 416 Query: 438 ESLKHFVSRRAMDVDGMGDKIIDQLVE--KEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 +L HF + DG G K+I++L E + +H ++++L G K+AQN Sbjct: 417 NTLVHFFKTLGNN-DGFGPKVIEKLHEFGIKKIH---EIYELKQESFVSF-GFGDKTAQN 471 Query: 496 VVNALEKAKETTFA--RFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVG 553 +V L+ +++ RFL A G+ + L + +L++L A++E+L ++ Sbjct: 472 LVEQLQVSRDVEIEDWRFLAAFGVSRLAGGNCEKLLQHH-SLDSLFEATVEDLVQLDGFA 530 Query: 554 IVVASHVHNFFAEESNRNVISELLA-EGVHWPAPIVINAEEI---DSPFAGKTVVLTGSL 609 V A + A N+ E L +++ I A E ++P GK +V TG++ Sbjct: 531 QVSADAIVEGLA-----NIKEEFLKLSALNFNLTITPKASEKSPGETPVFGKIIVFTGAM 585 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRL 668 +Q SR D + + LGAKVA SV+ KT L++ G+ G +K+ A++ G++V+ E + L L Sbjct: 586 TQGSRGDMEKQAKALGAKVAKSVTGKTSLLVTGDKVGANKINAARDKGVQVLSELDYLAL 645 Query: 669 LGS 671 + + Sbjct: 646 IST 648 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 148/580 (25%), Positives = 251/580 (43%), Gaps = 63/580 (10%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ +LR TL + + YH + D YD+ L L+ + T SP Sbjct: 34 EVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFGQEFTDPSPL------- 86 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 +A I H V ++ + D + R +K W + K+DG+AVS++Y Sbjct: 87 ASARGPIAHPVAHTGVEKLHDAAAVA--------RWMTGKKGVWV-QPKVDGVAVSLVYR 137 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV--RGEVFLPQAGFEKI 184 G LV +RGDG G D + +++ + +I +L P L+V +GE++L ++ Sbjct: 138 QGRLVQLLSRGDGLQGHDWSRHIKDLDSITRQL-----PQPLDVVLQGELYL------RL 186 Query: 185 NEDARRTGGKVFANPRNAAAGSL--RQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 + G +N R AG L +QL P A G+ V + PD R Sbjct: 187 QAHVQAEAGS--SNVRGTVAGMLARKQLGPEPGA-------SIGLFVWDWPHGPDNQGER 237 Query: 243 LLQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L Q WG P S R T ++ EE A + ++ R L F DGV+++ +S ++ Sbjct: 238 LTQLAAWGFPDSQRFSTAIDTPEE--ATHWRLHWYRSPLPFATDGVILRQDSRPPADR-- 293 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + AP W A+K+P + + VR+V F +GRTG +TP+ RL+PV + +S +L + Sbjct: 294 WQPNAPYWIAAWKYPFAQALAEVREVRFLIGRTGKVTPLLRLKPVTLDDRRISQVSLGSL 353 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 L +R GD+V I AG IP+ VV R + + + P + E+ Sbjct: 354 ARWRALDIRPGDQVAISLAGLTIPRFDQVV--HRAVERQVLPVP--------EAEQYGQH 403 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 + + + G C Q L ++ + + G G +LV+ V + D L A + Sbjct: 404 SCWQASDG--CQEQFIARLVWLSGKQGLAMPGTGKGTWKRLVQAGLVTSLTDWLTLDAQQ 461 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L + + K+A + + + + FA++ LG+ A + L Sbjct: 462 LLSVPGISRKTATQLQRSFDIGRNRPFAQWRKGLGV------PAPAQVPRDENWQTLAGR 515 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 S + Q +P +G A+ + NFF E + + + L G+ Sbjct: 516 SASDWQTLPGIGATRATQLANFFTHEQVQRIATLLGTRGI 555 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 178/660 (26%), Positives = 283/660 (42%), Gaps = 89/660 (13%) Query: 28 PEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFD 87 P I D YD + HP + + ++ +G A Q MLS D + Sbjct: 59 PVIEDILYDSFWNKFALNHPNHPFITSVETEVLNLGKT--VALPQ-----KMLSTDKAYS 111 Query: 88 EESFLAFNKRVQDRLKNNEKVTWCCEL----KLDGLAVSILYENGVLVSAATRGDGTTGE 143 +E + R+ + + T E+ KLDG A +++G + TRGDG G+ Sbjct: 112 KEEIKKWLDRILKAAEELDIDTNEIEIRITPKLDGYAA---FDDGERL--YTRGDGVKGQ 166 Query: 144 DITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAA 203 D++ RA L R GE+ + +A FEK + F N RN Sbjct: 167 DVS------RAFERGLKVVRNSERGLGAGEIVINKAYFEK-------KLSQYFENSRNIQ 213 Query: 204 AGSL--RQLDPRI---TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVT 258 A + + +D R+ + F + V LP+ W D +T Sbjct: 214 AAIIAEKNVDERVLEAIKEGACVFHPFAV-------LPN-----------WTGNYQDLMT 255 Query: 259 LCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQ 318 F +E+ ++ +D+DGV+++ +E +G + RW +AFK + Sbjct: 256 ---------DFDGIIEQVWNSVEYDVDGVILEATDTRIKEHMGANRKFHRWQIAFKINDE 306 Query: 319 EQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIR 378 V V Q RTG +TPVA L P ++G ++S T+H+ + ++ G+ G V I Sbjct: 307 VAEVEVISVTPQTSRTGRVTPVAELVPTRISGAMISRVTVHHYNMVKINGVGPGAIVQIV 366 Query: 379 RAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKE 438 R+G VIP++ V+ +P D + P CP C S + V C C AQ + Sbjct: 367 RSGLVIPKIEKVI---KPVDPQ---MPELCPSCKSHLLWESDHLV--CPNKSDCPAQTEN 418 Query: 439 SLKHFVSRRAMDVDGMGDKIIDQLVE--KEYVHTPADLFKLTAGKLTGLERMGPKSAQNV 496 +L HF A + DG G K I++L +++H DL K + G G K+++N+ Sbjct: 419 TLVHFFKTLANN-DGFGPKNIEKLANLGVKHIHQMYDL-KPHQFAMYGF---GEKTSKNL 473 Query: 497 VNALEKAK--ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 + L+ +K E RFL A G+ +G L ++ E E A++E++ ++ Sbjct: 474 YDQLQASKNIEIEDWRFLSAFGVSRLGGGNCEKLLQHYSLRELFE-ATVEDIAELNGFAR 532 Query: 555 VVASHVHNFFAEESNRNVISELLAE---GVHWP-APIVINAEEIDSPFAGKTVVLTGSLS 610 V A + A N+ E G + P E + SP GK VV TG + Sbjct: 533 VSAEAIVKGLA-----NIKEEFFKVYDLGFNLSITPKQSELESLASPLTGKIVVFTGKML 587 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 Q R D + LGAKV SV+ T +IAG G +K+ A+E G++V+ E E L L+ Sbjct: 588 QGKRSDMEKHAKALGAKVGTSVTSNTTYLIAGLKVGETKINDAKEKGVKVLSEQEYLDLI 647 >UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPT5_9BACT Length = 647 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 189/686 (27%), Positives = 298/686 (43%), Gaps = 98/686 (14%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L+ L LY + DAEYD L+ ++ + + + +VG Sbjct: 6 LKAKLDQANQLYRTGGESPLSDAEYDYLLEQVNDQKFRD-----------KVGYE--IEK 52 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 +++ VPM SL+ + + ++K L C K DGL++ + + +G+ Sbjct: 53 NKVELAVPMGSLNKIKTQAEVFDWSKSKSIPLDTE----ICVTPKYDGLSLLVYFVDGIY 108 Query: 131 VSAATRGDGTTGEDI----TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE-KIN 185 A TRGDG G+D+ T N +P G I GE + +A F+ K + Sbjct: 109 KGAYTRGDGMFGQDVGEHFTVNPLCDLRLPQDFTGYLI-------GECIMDEAKFQTKYS 161 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E F NPRN AG L R T R L CY + ++ H ++ Sbjct: 162 EK--------FKNPRNMVAGLLS----RKTLSRELADVCYVAYGVRSAQM--AHKQDQVE 207 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEE----------DRPTLGFDIDGVVIKVNSLA 295 F +R + +VL +K+E+ D T F DG+V+++N Sbjct: 208 F-------CNRYINAQWKYKVLCPLYKLEDLKDAELQKVYDSETR-FQCDGLVLEINDSD 259 Query: 296 QQEQLGFVARA--PRWAVAFKFPAQEQM-TFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 Q+G + P A A+K + + + + V++V +Q+ + GA PV R+EP+ +AGV Sbjct: 260 LFHQIGKETNSLNPGAARAWKPESDDSLPSIVKEVVWQISKNGAAKPVIRIEPIDLAGVT 319 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 +SN T NA IE G+ G V I R+GDVIP+V+ V P V P CP C Sbjct: 320 ISNVTGINARFIEDSGIAKGATVTIIRSGDVIPKVIGV-----PNAIENVDLPKQCPSCE 374 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S++ E C L C A K +L F S + D +G+ II L + Y + Sbjct: 375 SELVWNENRVDIVCENKL-CPATNKAALIDFFS--TLKADEVGEGIITSLWDAGY-QSVK 430 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALE-KAKETTFARFLYALGI-REVGEATAAGLAA 530 +L LT L LE + A+ V+++++ + R +A + + +GE L Sbjct: 431 NLLNLTMEDLLKLEGFKQRKAKKVLDSIKISVVDVPLPRLQHASNLFKGLGEKKLELLQK 490 Query: 531 YFGTLEALEAASIEELQKVPDVG-IVVASHVHNFFAEESNRNVISELLAE--GVHWPAPI 587 Y +A S EEL +V I S++ + + E AE G+ + + Sbjct: 491 YD---QAGIKPSFEELLEVDGYSEISAKSYLDSI-------DAYWEFAAELPGLKY-KKV 539 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD-LVIAGEAAG 646 ++N + FAG+T+V TG S + K G K+ SVSKKT LV+ + +G Sbjct: 540 LVNEGGM---FAGQTLVFTGFRSPELEEQVKTE----GGKIGSSVSKKTSVLVVKAKGSG 592 Query: 647 -SKLAKAQELGIEVIDEAEMLRLLGS 671 SK KA +LG+EV ++ L S Sbjct: 593 SSKEKKAIDLGVEVWGRDDLENKLNS 618 >UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BKC6_9BACT Length = 183 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 66/162 (40%), Positives = 107/162 (66%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I ++ LR L H + Y+++D P I D E+D+L+++L ELE ++P+L +SPT+ Sbjct: 1 MQEIRNKIEALREVLHDHNHRYYILDDPIISDYEFDQLLQQLNELEVQNPDLTDLNSPTR 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG +F + H+ PM SL N + +E + + +R++ L ++ + CELK DG + Sbjct: 61 RVGGGVTKSFETVPHKYPMYSLSNTYSKEELMQWEERLRKSLGEETQIEYTCELKFDGAS 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 +S+ YENG+L+ A TRGDG G++IT+NVRTI+ +PLKL + Sbjct: 121 ISLTYENGILIKAITRGDGLQGDNITTNVRTIKTVPLKLKSD 162 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 143/514 (27%), Positives = 233/514 (45%), Gaps = 73/514 (14%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y D I D++YD L+ EL + H L+T GA ++RH++PMLS Sbjct: 32 YRNTDDSIISDSDYDALIDELARRDPGH-ALLTEVESEADFGAG------KVRHQIPMLS 84 Query: 82 LDNVFDEESFLAFNKRVQDRLKN---NEKVTWCCELKLDGLAVSILYENGVLVSAATRGD 138 + V + A+ +RV+ +N V KLDG+A + ++GVL A+RGD Sbjct: 85 TEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL--KDGVL---ASRGD 139 Query: 139 GTTGEDITSNVRTIRAIP-LKLHGENIPARLEVRGEVFLPQAGF-EKINEDARRTGGKVF 196 G TG +IT +P L +HG GE+ + Q+ F E ++E+ F Sbjct: 140 GLTGNNIT------HILPKLVVHGVG-------DGELVMIQSYFDEHLSEE--------F 178 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDR 256 +PRN G++ PR A + L + H + F S Sbjct: 179 KHPRNVVTGAVGADTPRPAAMKAL----------------NDHSIHFVSFTTLTRIDSRT 222 Query: 257 VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFP 316 T+ E+ + + + P + DG+V+ V S +++LG W VA K Sbjct: 223 DTIVAQLPEIREY---LLGNTP---YPTDGLVLAVESPELRKELGSTGHHHNWMVAAKTV 276 Query: 317 AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVV 376 + T V V++Q+G+TG +TPV +L+ V ++G +++N T HNA ++E +G+ +G Sbjct: 277 GETATTAVVGVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVEEMGIDVGAMAT 336 Query: 377 IRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQR 436 I R+G++IP +V+ + PTHCP C ++R G+ + C C +R Sbjct: 337 ITRSGEIIPFLVSATPAPNGAS-----LPTHCPACTEHLKR-RGDFLV-CINNE-CEGRR 388 Query: 437 KESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNV 496 L HF + +D G D+L+ V + ++F +TA + + GP + N+ Sbjct: 389 HARLHHFFNIIG-SIDLFGPVACDKLIAAG-VRSIQEVFAITAAEFEAMG-FGPGQSANL 445 Query: 497 VNALEKAKETTFARF--LYALGIREVGEATAAGL 528 V LE AK F L A+GI +G + L Sbjct: 446 VAELEAAKTRPVDDFRVLAAMGISNLGRGDSKKL 479 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 150/586 (25%), Positives = 255/586 (43%), Gaps = 69/586 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ LR L + +Y+ I D YD +LRE + + P Q V A Sbjct: 37 KEIDALRQQLEQWDDVYYTEGKSPIEDDVYD----QLREQLNQWSQCFQP----QNVIPA 88 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 L + H V L + D + + + +D + K+DG+AV+++Y Sbjct: 89 RLPDNGKQPHPVAHTGLKKLSDRVQLVQWIVQREDL---------WVQPKVDGVAVTLVY 139 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ++G LVSA +RG+G GED T R I IP L G P+ ++GE+FL K+ Sbjct: 140 QHGKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGA--PSSFVLQGELFL------KMT 191 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + + G V N R+ AG +R+ P + G+ V E + P RL + Sbjct: 192 DHRQYAQGGV--NARSIVAGEMRRHQPSPVLSQ------IGLFVWEWPDGPKAMPERLDK 243 Query: 246 FKKWGLPVS-DRVTLCESAEEVLAF----YHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 K+ G ++ D ES +V + YH L F DGVVI+ +E Sbjct: 244 LKEMGFAMTADYTHAIESFADVEKWRDHWYHS------PLPFVTDGVVIR----QTKEPQ 293 Query: 301 GFVAR--APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 G R + WA+A+K+P Q+ V DV F VGRTG + V ++ P+ + VS + Sbjct: 294 GRYWRNTSADWAIAWKYPPVHQVAEVVDVAFSVGRTGKVAVVLKISPLKLDDKSVSRVNV 353 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVE 416 + ++ + GD+V + AG IP++ NVV +ERP + D Sbjct: 354 GSLSRWKQWDVLPGDRVSVSLAGQGIPRLDNVVWRGTERPV------------IVSPDEH 401 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + R + ++C Q L +++ GM D + +L++ + + Sbjct: 402 NFHAFSCFRYS--VVCQQQFLARLVWLSGEHGLNLAGMRDGMWLRLMQHDLLGDVLSWLY 459 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT +L + MG K A+++ +L+ A++ + + +L ALGI V + + L Sbjct: 460 LTEAQLNAVNGMGDKRARDIYMSLQSARQKSLSHWLLALGI-PVPRSAISALNNV--NWL 516 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 AL+ + ++ ++ +G A + F +I+ L EG+H Sbjct: 517 ALQQRTAQQWRQFSGIGERRAEEIMAFLNHPIVMELIARLDLEGIH 562 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 144/579 (24%), Positives = 254/579 (43%), Gaps = 53/579 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE-LETKHPELITPDSPTQRVG 63 ++++ LR L + +Y+ + D YD+L +L + L P Q V Sbjct: 35 KKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQLREQLNQWLGCFQP---------QSVA 85 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + L + H V L + D E + + + +D W + K+DG+AV++ Sbjct: 86 SVRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQRED--------VWI-QPKIDGVAVTL 136 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y++G L SA +RG+G GED T VR I IP L N+P+ L ++GE+FL K Sbjct: 137 VYQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLL--TNVPSLLVLQGELFL------K 188 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 + + + G V N R+ AG +R+ P + G+ + E + P T RL Sbjct: 189 MTDHRQHIQGGV--NARSVVAGEMRRHQPSPVLSQ------IGLFIWEWPDGPKTMPERL 240 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + + G ++ T + +H P L F DGVV++ Q + Sbjct: 241 EKLTEMGFAMTADYTHAIGSFADAEKWHHYWYHNP-LPFVTDGVVLRQTKEPQGRY--WR 297 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 + WA+A+K+P Q+ V DV F VGRTG + V +L + + VS + + Sbjct: 298 NTSADWAIAWKYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLSR 357 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 ++ + GD+V + AG IP++ NVV R + +V P+ + A Sbjct: 358 WKQWDVLPGDRVSVSLAGQGIPRLDNVVW--RSTERLPIVSPSEH----------DFHAF 405 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 + +C Q L +++ G+ D + +L++ + LT +L Sbjct: 406 SCFRYSTVCQQQFLARLVWLSGEHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQLN 465 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 + MG K A+++ +L+ A++ +R+L ALG+ A +A + L AL+ + Sbjct: 466 AVTGMGDKRARDIYKSLQSARQMPLSRWLLALGLPVPRSAISA--LNHVNWL-ALQQWTA 522 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 ++ ++ +G A + F + I+ L AEG+H Sbjct: 523 QQWRQFSGIGERRAEEIMAFLKHPAVVEFIARLDAEGIH 561 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 148/578 (25%), Positives = 237/578 (41%), Gaps = 50/578 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++ L + + Y+ + D YD R L P L P T Sbjct: 52 EAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYDSAKRRLAHWAECFPLLAKPSVNTHE 111 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 A H V + + D ++ + R + W + K+DG+AV Sbjct: 112 PTGA-------KHHPVAQTGIAKLPDRDAVAGWVAR------QGDHPLWV-QPKVDGVAV 157 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RGDG +G+D + I AIP L + P + ++GE++ Sbjct: 158 TLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLVI-LQGELY------ 210 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPR--ITAKRPLTFFCYGVGVLEGGELPDTH 239 ARRT + + + A + L R +T + T G+ V PDT Sbjct: 211 ------ARRTAHRQSRDGTDGARARIAGLMARDTLTDREGSTI---GLFVWAWPNGPDTM 261 Query: 240 LGRLLQFKKWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL WG V++ +AE++ A+ + R L F DGVV+K Sbjct: 262 PERLETLAGWGFGDVAEMTHGVATAEDIAAWRQRWY--RHALPFATDGVVVKRGDRPPGS 319 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + A P WA+A+K+PA+E + V +EF VGRTG I VA LEPV + V+ +L Sbjct: 320 D--WQASPPDWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSL 377 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 + R +R GD+V +R AG IPQ+ VV+ RP V + ++ Sbjct: 378 GSLAHWRRTDVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQ----------VDAPEADQY 427 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + + R T C Q L+ S +D G+G +QLV+ V D L Sbjct: 428 DRLSCLRFTPA--CRDQFLARLEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLD 485 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L L +G K+A+ A + R+L ALG+ V +G + L Sbjct: 486 TAALEALPGVGKKTARAWQRHFALADTRSAVRWLRALGVPAVPRQALTDALERYG-MAGL 544 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 + + + +G A + FF + R+ ++ L Sbjct: 545 GTLAPPDWRDYSGIGETRAMQLTRFFRDTDIRHWLASL 582 >UniRef50_C4FL15 DNA ligase (Fragment) n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FL15_9AQUI Length = 215 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%) Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 V T D+++L + + GPKS +N+ NA+E++K+ R +Y LGIR VGE TA Sbjct: 11 VRTIPDIYRLNYNLIKNIPGFGPKSVENLKNAIEESKKRPLYRLIYGLGIRYVGEVTAKT 70 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 LA+ ++ L+ +I +L K+PDVG VAS ++NFF + N +I EL GV Sbjct: 71 LASAVKCIDDLKDFTITDLIKLPDVGDKVASEIYNFFHNQQNLKMIQELRDLGVK----T 126 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 EE AG V TG+L SR+ AK + LG V +VSKK ++ GE GS Sbjct: 127 CHEEEEKKGKLAGLNFVFTGTLKCCSREKAKEIVESLGGNVLDTVSKKVHYLVVGEEPGS 186 Query: 648 KLAKAQELG-IEVIDEAEMLRLLG 670 KL KAQ+LG +++I+E E L+L+G Sbjct: 187 KLQKAQKLGTVKIINEEEFLKLIG 210 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 62/583 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ ++T L+ L + Y+ I D YD L ++L +L + L + P+ Sbjct: 33 ERLQLEITALKNQLERWDVAYYQQGDSLIEDQVYDSLRQKL-QLWHRCAGLERVEEPSSL 91 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 + A + H V L + D + V L+ V + K+DG+A+ Sbjct: 92 LPAG------KTPHPVAHTGLHKLADPAA-------VDQWLRGRSDV--WVQPKVDGVAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RG+G GE+ VR I AIP + ++ PA L ++GE+FL Sbjct: 137 TLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIPAAV--KDAPATLILQGELFL----- 189 Query: 182 EKINEDARRTGGKVFANPRNAAAGSL--RQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 +N ++ G + N R+ AG+L +L P + G+ V + P Sbjct: 190 -MVNGHQQKIHGGI--NARSTVAGALMKNRLSPVLQQ--------IGLFVWAWPDGPKEM 238 Query: 240 LGRLLQFKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL Q G P++ + S ++V + + R L F DGVVI Q Sbjct: 239 TQRLQQLAAMGFPLALAYSQPVSSLDDVRQWRERWY--REALPFVTDGVVIHQARSPQGR 296 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + A+ WAVA+K+P +Q+ V DVEF VGRTG I V +L+P+ + VS L Sbjct: 297 Y--WQAKPGDWAVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNL 354 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVE 416 + + + GD+V I G+ IP++ V +ER E + H C + + Sbjct: 355 GSLPRWRQWAVVPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLP 414 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + +AR + G Q + + G+ + L+++ V D Sbjct: 415 ECRQQFLARLV--WLGGPQ------------GLGLHGVSESTWQVLIDQGLVRHLLDWLV 460 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT +L +G K +++ + A++ FAR+L ALG+ + T A + Sbjct: 461 LTPEQLMSAPGIGDKRGRSIHRQFQLARQQPFARWLIALGVPLSLQQTQA-----LKSWH 515 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 + + E +K+ +G A + F ++S L A+ Sbjct: 516 QIRQLPVGEWRKMTGIGAKKAEQITGFLQHPPFLTLVSTLEAQ 558 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 136/520 (26%), Positives = 235/520 (45%), Gaps = 56/520 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++++ L + H + LY EI D YD+LM EL H + +P Sbjct: 37 DKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYDQLMSEL-----THWQFCLKQAPHSD 91 Query: 62 VGAAPLAAF--SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 P+ F +++ H V L + D++ N+ + RL W + K+DG+ Sbjct: 92 F---PVEVFPDNKLVHPVAHTGLSKLKDKQEI---NRWLHGRLP-----VWL-QPKIDGV 139 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 AV+++Y+NG LVS +RG+G G + T+ R I IP + EN P L ++GE+FL + Sbjct: 140 AVTLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNI--ENAPPDLVLQGELFLHK- 196 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 E ++ G A RN AG + + D K+ G+ + + P Sbjct: 197 -----EEHRQQLLGSDGA--RNRVAGLMMRKDHSSELKQ------IGLFIWSWPDGPAEM 243 Query: 240 LGRLLQFKKWGLPVSDRVT-LCESAEEVLAF-YHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +L + G P++ R + E E+V H E+ P L F DG+V+K + Sbjct: 244 ESKLRKLADMGFPLALRYSHKIEEPEQVQKLRMHYFEQ--PML-FATDGIVLKQEIEPKG 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 Q + + + WAVA+K P + Q+T VR+V F +GRTG I+ V L+ V + +S Sbjct: 301 NQ--WRSGSNSWAVAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVN 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 + + +L + GD+V + AG IP++ VV R ++ +++ P ++ Sbjct: 359 IGSVRRWRQLDVLPGDRVTLTLAGHGIPKLAQVVW--RIKERQDIQPP----------DK 406 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 A++ T + C Q LK + + G+ L E++ V L Sbjct: 407 QHYHALSCLTLTVGCEQQFNARLKWLGEN--LQMTGVSSGSWAMLTERKLVTDLTGWLAL 464 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGI 517 +A ++ L +G K AQ + + KAK F+ ++ +G+ Sbjct: 465 SAQQIAALPGIGDKRAQAIYSQFSKAKNQPFSYWMKGIGV 504 >UniRef50_UPI000169996B DNA ligase, NAD-dependent n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169996B Length = 256 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 16/200 (8%) Query: 483 TGLERMGPKSAQNVVNALE-----KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 +G++ +G +AQ + +AL + A +L + +R + A A L+ FG+LEA Sbjct: 53 SGIKGVGASTAQAICDALAGPLPAEPLAGGLADWLAGMNVRGLNRAVAERLSERFGSLEA 112 Query: 538 LEAASIEELQK-----VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP--APIVIN 590 L A+ E L++ V VG +VA H+ FF + N+ VI +L GV+W AP Sbjct: 113 LRQATPELLRREQRSLVEGVGPIVADHIVTFFRQPHNQEVIEKLRQVGVNWEEEAPPETP 172 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 AE +P GKTVVLTG+LS+ R KA L LG +V GSVSK TD +IAG AGSKL+ Sbjct: 173 AE---APLLGKTVVLTGTLSR-PRSAIKAELQALGGQVTGSVSKNTDYLIAGAEAGSKLS 228 Query: 651 KAQELGIEVIDEAEMLRLLG 670 KAQ+LG+E++DEA + RLLG Sbjct: 229 KAQQLGVEILDEAGLARLLG 248 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 2/54 (3%) Query: 501 EKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 +++K+T+ ARFL+ALGIREVG+ATAA LA +F L+ L A ++ + D GI Sbjct: 4 QRSKQTSLARFLFALGIREVGDATAAALARHFRDLQPLMTAERDDF--IHDSGI 55 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 139/576 (24%), Positives = 243/576 (42%), Gaps = 62/576 (10%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +++ L+ L + Y+ IPD +YD L +LR+ + SP + Sbjct: 30 EISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGKLRQWQRCF-------SPASDLRKPL 82 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 L ++ H V + + + D+ + + R + + K+DG+AVS+LY Sbjct: 83 LKTDGKVLHPVSHMRVKKLPDKTALTRWMAR---------RSGLWVQPKIDGVAVSLLYR 133 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR---GEVFLPQAGFEK 183 +G L +RGDG GED T R I IP + IP + V+ GE++L + Sbjct: 134 DGQLEQMISRGDGVRGEDWTEKARLIPDIP-----KFIPHSMRVQVFQGELYLKMTDHRQ 188 Query: 184 -INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFC-YGVGVLEGGELPDTHLG 241 IN GGK N R+A AG+L AK P G V E + P + Sbjct: 189 AIN------GGK---NARSAVAGAL-------MAKAPAPLLQQIGFFVWEWPDGPTSLAQ 232 Query: 242 RLLQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL + + G P +S ++ +EV ++ + L F DG+V V+S+ + Sbjct: 233 RLTETRSLGFPDISAWTHRVDNVDEVESWRERWFHQ--PLPFVTDGIV--VHSIPTRRGS 288 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 ++ W +A+K+ E VR VEF +GRTG + V L PV + +S ++ + Sbjct: 289 DWLPEFGEWVIAWKYAPPEATAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGS 348 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 + ++ + GD+V I AG P++ V+ E +P D + Sbjct: 349 IENWKQTDVIAGDQVSISLAGLGAPRLDKVLWR-----VAERAYPPQ-----PDAAQFNS 398 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + T C Q L+ + +++ G G + QL++ + LT Sbjct: 399 VSCFHLTPQ--CRQQFLARLEWLGGKSVLNLVGTGRQTWQQLIQSGSMVHIFSWLALTKE 456 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L + +G + AQ + +++ F R++ ALG+ + E L + L + Sbjct: 457 QLEAVPGIGEQRAQLFWQQFKLSRQLPFKRWVKALGV-PIPEKALNTLTD--DNWQPLVS 513 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 ++E Q++P VG +A + +F + R +I L Sbjct: 514 RRLQEWQQLPGVGRKLAGKIVSFLQQREVRQLIEGL 549 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 102/397 (25%), Positives = 183/397 (46%), Gaps = 46/397 (11%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + +++ L T + H +Y+ P + D E+D L+ EL L ++T ++G Sbjct: 50 QHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSPVLT------QIGG 103 Query: 65 APLAAFSQIR-----HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 L + H MLSL++V + + F + QD+ + K DG+ Sbjct: 104 GNLQHNDTRQRDRQPHRQQMLSLNSVRERTAVDKFYQLHQDQ-------QLLIQPKFDGM 156 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN----IPARLEVRGEVF 175 A+ ++YE G+LV A++RGDG G+D+ A+ L+ + N P L + GE++ Sbjct: 157 AIELVYEKGMLVGASSRGDGKQGKDLL-------ALMLRSNAVNSMIAYPYTLVIHGELY 209 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCY-GVGVLEGGE 234 + Q ++ GK + + R+ AG QL P T L F + + E Sbjct: 210 VGQQDWQ--------LRGK-YVSSRHMTAGIASQLSPAQTDVMSLRFMPWRWIDSPYNNE 260 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L +L F +S + + + LA Y E F +DG+V+K+ + Sbjct: 261 LMGLAQLAMLGFADMS-KMSHVIDRPQDIDYWLAHYQNTE------AFLLDGIVLKLANN 313 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 Q Q G APRWA+A KF + ++ V D+ +QVG++G +TP+ ++P+ ++G V+ Sbjct: 314 TLQRQYGHTQHAPRWALALKFTGPKGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVT 373 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV 391 + + + + + +G +V I G+ PQ+ +V Sbjct: 374 RVSGRSQPWLLQSKIEVGSQVEIELVGNATPQLTRLV 410 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 150/575 (26%), Positives = 227/575 (39%), Gaps = 75/575 (13%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ L + L + Y + + DA YD + + L +T +P Sbjct: 16 EQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCFSLATVSAAP--- 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 P A + H V + + D S + + K + K+DG+AV Sbjct: 73 ----PPVAAGRTHHPVAHTGVQKLKDAASLSQWM---------HGKTDLWVQPKVDGVAV 119 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y G L +RGDG GED T+ R I AIPL++ GE + L+ GE+FL + G Sbjct: 120 SLVYRKGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVLQ--GELFLRREGH 177 Query: 182 EK-----INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 + IN A+ G + RN A+ L LD L + + G E Sbjct: 178 HQQQDGGINARAQVAGAMM----RNTASPLLNDLD--------LFIWAWPDGPKEM---- 221 Query: 237 DTHLGRLLQ-----FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 +T L L Q + W PVS + ++ R L F DGVVI+ Sbjct: 222 ETRLTILAQGGFPLARAWSQPVSSVADVTRWRKQWF---------REPLPFVTDGVVIR- 271 Query: 292 NSLAQQEQLGFVARAPR--WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 +E G R W A+K+P +Q+T V + F VGRTG I+ VA+LEP+ + Sbjct: 272 ---EAREPPGKSWRPGEGSWVAAWKYPPVKQVTEVNALRFAVGRTGKISVVAQLEPITLD 328 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 VS ++ + E+L L GD+V + AG IP++ VV RP + P Sbjct: 329 DKQVSKVSIGSLTRWEKLDLAEGDEVEVSLAGQGIPRLDAVVW--RPAKRSKPAPP---- 382 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 R + + TG C Q L + D+ GMG+ QL + Sbjct: 383 -----AARFDALSCLFATGA--CEEQFISRLVWLSGKPVFDLAGMGEATWRQLSSRHRFE 435 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 L+ L A + + ++ F R++ ALG+ A A LA Sbjct: 436 HLFSWLALSVDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLPLPARAWQA-LA 494 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 T L+ Q +P VG A + N+ Sbjct: 495 D--DTWHQLQMRDERSWQTLPGVGAERARQLVNYI 527 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 34/405 (8%) Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG+AV++ Y G L +RGDG G+D T + I AIP + P L + GE+ Sbjct: 131 KVDGVAVTLTYLQGHLTQVISRGDGVRGQDWTDKAQYISAIPSLI--SPAPPLLVLHGEL 188 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 FL ++++ ++ G + N R + AG+L + P + GV + + Sbjct: 189 FL------RVHDHRQKDSGGI--NARASVAGALMRKSPSSLLSQ------IGVFIWAWPD 234 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 P + + +L + G +S+ ++ ++ + K+ P L F DG+VI+ Sbjct: 235 GPASMVEKLRTLHRMGFTLSEEFSVPITSFTDAVHWRKIWFQSP-LPFVTDGIVIR---- 289 Query: 295 AQQEQLG--FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 ++E G + ++ W++A+K+P +QM V+ V F +GRTG I+ V L P+ + Sbjct: 290 QEEEPAGHYWQSQPGYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKW 349 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V L +R + GD+V++ AG IP++ V + R + E+ P Sbjct: 350 VKGVNLGTVARWKRWNVLPGDQVIVSLAGQGIPRLDKV--AWRVDKRDEISTP------- 400 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 D+++ + R L C Q L R +D+ G+ I L + A Sbjct: 401 -DMDQFHTFSCFRRESTL-CETQFIARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLA 458 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGI 517 +LT + + +G A + +KAK F +L ALG Sbjct: 459 SWLELTPEIIATVPGIGEVKANKIYLQFQKAKTRPFISWLAALGF 503 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 124/523 (23%), Positives = 224/523 (42%), Gaps = 59/523 (11%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + ++EQQL + YH + D YD+L +LR ++ PD Sbjct: 41 INALEQQLNKWSAA-------YHQQGHSPVTDDIYDQLQDKLRVWQSCRG---LPD---- 86 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 + + P+ Q H V L + DE + R K W + K+DG+A Sbjct: 87 KTESQPIPGKGQFLHPVAHSGLKKLKDETAL--------TRWMAGRKNLWV-QPKVDGVA 137 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V+++Y G LV +RG+G G++ T I AIP + N PA L ++GE+FL G Sbjct: 138 VTLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYI--ANAPALLTLQGELFLLMDG 195 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 ++ ++GG N R+ AG+L + P PL GV + + P T Sbjct: 196 HQQA-----KSGG---VNARSTVAGALMRKSPS-----PL-LAQVGVFIWAWPDGPTTMK 241 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ + G P + + + + + + + P L F DGVV++ ++E Sbjct: 242 EKVALLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQAP-LPFVTDGVVVR----QEEEPA 296 Query: 301 G--FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 G + A +W++A+K+P + + V+D+ F +GRTG T V + P+ + + + Sbjct: 297 GRYWQATPGQWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNI 356 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 + ++ + GD + + AG IP++ NVV +T + + ++ Sbjct: 357 GSVTRWKQWDIAPGDHITLALAGHGIPRLDNVVWRVHQRNT----------ITAPNWDKF 406 Query: 419 -EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + R G C Q L +D+ G+G +L+ E ++ L Sbjct: 407 HQLSCFQRLPHG--CEPQFLSRLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLL 464 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 T ++ + +G A+ + ++AK+ F+R+L ALG +V Sbjct: 465 TPEQIASIPGIGNARAEKIYQQFQRAKQQPFSRWLLALGFPQV 507 >UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM64_9BACE Length = 652 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 172/698 (24%), Positives = 306/698 (43%), Gaps = 95/698 (13%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L ++ H +Y M APEI DAEYD + L+ L+ PD+ + + Sbjct: 13 LLDMIKRHNKMYR-MGAPEISDAEYDAEIELLKTLD--------PDNEWFKHTEPAFVSE 63 Query: 71 SQIRH-EVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 ++ R +PM SL+ V D + + LK N V C KLDGL S+LY N + Sbjct: 64 TRKRALPIPMKSLNKVKDISELKKWYMSLG--LKGNAGVV--CMPKLDGL--SLLY-NEL 116 Query: 130 LVSAATRGD-GTTGEDITSNVRTIRAIPLKLHGENIPARLEVR-GEVFLPQAGFEKINED 187 A +RG G+D T++ + N + GE + ++ +E+ Sbjct: 117 TGEAYSRGGIENEGQDCTNHYQA------STQCYNPASSFHYTFGEFVINRSDWEQHFHG 170 Query: 188 AR-RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 R + G +F +PRN AAG L + +P + +FF YGV + + H L++ Sbjct: 171 KRSKFTGDIFKSPRNTAAGLLNRDEPCDYLEHA-SFFRYGVDESSLHDYNNFH--SLIE- 226 Query: 247 KKWGLPVSDRVTLCESAEEV----LAFYHKVEED-------RPTLGFDIDGVVIKVNSLA 295 T+C ++ AF ++ E+ + + IDG+VI V+ L Sbjct: 227 -----------TICNIYQQEHLYHFAFIDELNEELLMNLFKEWSKIYPIDGIVIYVDDLR 275 Query: 296 QQEQLGF--VARAPRWAVAFKFP--AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 E +G + P +A+A+K P + T V+ + ++V ++GA+ PV +E V Sbjct: 276 LWEVIGRHQTSGNPLYAIAYKHPDFTESFETTVKGIVWKVSKSGALKPVVNIEMVDTGDC 335 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP--THCP 409 + N T +NA I + G ++++ R+G VIP++++ LS ++ +E ++ + CP Sbjct: 336 NMENPTGYNAGWINDHEIAKGAEILVTRSGGVIPKILS-TLSPATQEEQEKLWDEMSECP 394 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CGS E CT G Q + + +++ A + MG++ + ++ + Sbjct: 395 HCGSSTMWNENHIELCCTNPSCPGVQLAKIIFFYLTCGA---ENMGEETLSKIFNAGFTS 451 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 PA + +T L +E G S N++ LE ++ ++ V AT + Sbjct: 452 IPA-ILNVTFNDLIKIEGFG-DSISNII--LENNRKI----------MQGVDLATLMQAS 497 Query: 530 AYFGTLEALEAASIEELQKVPDVGIV------VASHVHNFFAEE-SNRNVISELLAEGVH 582 F + ++A I L ++ D + +H + +E+ N + + L G + Sbjct: 498 DCFKGIGKIKAQKI--LDEMDDEDLCSFCQGWYINHEPDVQSEDFKNCPITVQNLLLG-Y 554 Query: 583 WPAPIVINAEEIDSPFAGKTVVLTGSLSQMS------RD-DAKARLVELGAKVAGSVSKK 635 +P + +I + KT VL G +S RD + + + G K+ VSKK Sbjct: 555 FPFMAFLEETKIPYKLSPKTAVLEGKCKGLSICVSGFRDSNLEEVITNEGGKIVSGVSKK 614 Query: 636 -TDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLLGS 671 T LV+ ++A SK++KA+ LGI ++ E + Sbjct: 615 TTHLVVKDKSANSSKISKAKLLGIPILSIEEFCDFFNN 652 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 142/569 (24%), Positives = 245/569 (43%), Gaps = 85/569 (14%) Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 KLDG A +++G TRGDG G DI+ + + K G + A GE+ Sbjct: 127 KLDGFAG---FDDGN--RLYTRGDGKKGSDISRVFKRGLCV-FKDSGRGLGA-----GEI 175 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 + ++ FEK + F PRN + +++ A++ +++ G Sbjct: 176 VVKKSYFEKYLVHS-------FEYPRNFQSSLIKEKALDEQAQK---------AIIDKGA 219 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L + F K + L EE+ V + + FD+DGVV +V ++ Sbjct: 220 L-------FVPFIKLPIWSGSMTELVAKFEEI------VSQVLVMVDFDVDGVVFEVINI 266 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 + Q+G + RW +AFK V +V QVGR+G ITPVA +EP ++G + Sbjct: 267 DLKTQMGANRKFHRWQIAFKENKDIVQVKVLNVMPQVGRSGKITPVAEVEPTLLSGATIV 326 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 T H+ ++ GL IG V + R+G VIP++++ VL P D P +C CG Sbjct: 327 RVTGHHYGLVKEQGLGIGSVVELTRSGLVIPKIIS-VLKPMPVD-----IPDNCLSCGMP 380 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH---TP 471 + V C C AQ + +F A + DG G VEK Y H + Sbjct: 381 L--VWESDFLVCVNHKNCPAQIIGRITYFFKVLANN-DGFGIAT----VEKLYAHNIRSV 433 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEK--AKETTFARFLYALGIREVGEATAAGLA 529 + ++ L +L + G K++ N+++ L + +++ RFL A G+ +G L Sbjct: 434 SQIYTLNVERLMAI-GFGEKTSINLISQLSRSISEKIEDWRFLAAFGMHRMGLGNCENLL 492 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 + L + ++E++ + FAE + + ++ L++ + Sbjct: 493 KSY-RLNDIFDLTLEQITNIDG------------FAELTAQVIVQGLVSIVDEYNQIYQY 539 Query: 590 NAEEIDSPFA-----------GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDL 638 N + F K +V TG ++ R++ K +G KV+ ++S K D Sbjct: 540 NFNLDTTVFTKDLQTLMHELFDKRIVFTGKMN-CPRNEMKKHAKLVGIKVSTTISTKIDY 598 Query: 639 VIAGEAAGS-KLAKAQELGIEVIDEAEML 666 ++ G G K+ A++LG+ V+ EA+ L Sbjct: 599 LVIGSRVGQKKIQNAEKLGVVVMTEADYL 627 >UniRef50_A8JFJ7 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JFJ7_CHLRE Length = 623 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 117/249 (46%), Gaps = 40/249 (16%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L L H LY PEI DA YD L R R+L + + D VGA P+AA Sbjct: 4 LEAALTKHRELY-FNQTPEISDAAYDELKRRFRDLAARLRGVAAEDVAFP-VGA-PVAAA 60 Query: 71 SQIR---HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-----VTWCCELKLDGLAVS 122 S +R H VPM SL V + A+ R RL + W E K+DGLAV Sbjct: 61 SALRKVKHTVPMTSLAAVNSRQEVEAWMGRTLARLAQLRQGAAGSWGWVVEPKVDGLAVR 120 Query: 123 ILYENGV-----------LVSAATRGDGTTGEDITSNV--RTIRAIPLKLHGENIPA--- 166 ++Y L AATRGDG GED+T N I+ +PL+ +P Sbjct: 121 VVYRRVAKGDGGGGAAYELQEAATRGDGEVGEDVTHNALHGGIQGLPLRF---TMPPGAA 177 Query: 167 ----------RLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITA 216 +EVRGEV++ A +++N++A GG FAN RNAA+G LR LDP Sbjct: 178 TSAPTSAAPEWVEVRGEVYVRIADLQQVNKEAEAAGGSGFANARNAASGGLRLLDPAECR 237 Query: 217 KRPLTFFCY 225 +R L+F Y Sbjct: 238 RRRLSFVAY 246 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 14/208 (6%) Query: 386 QVVNVVLSERPEDTREVVFPTHCPVCGSDV------ERVEGEAVARCTG---GLICGAQR 436 +V+ V+ RP + P CP CG V + GE + C G C AQ+ Sbjct: 281 EVMRVLPELRPPGAQPWALPACCPACGGPVRLQPAASKDAGEQLL-CVAAEQGAGCSAQQ 339 Query: 437 KESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH--TPADLFKLTAGKLTGLERMGPKSAQ 494 + L HF ++ + G+ ++ L + P +L L+ L G A+ Sbjct: 340 ERMLLHF-AKVCLKGSGLAAGVMQALTAAGLLEGGLPDFYTRLDRATLSALPGFGAARAE 398 Query: 495 NVVNALEKAKETTFARFLYALGIREVGEATAAGLA-AYFGTLEALEAASIEELQKVPDVG 553 + + +K A L+ L I+ VGE A L AY + L+ AS +E++ +G Sbjct: 399 AIAARVAASKSMRSAELLHGLNIKSVGETAAKALGVAYPRLVPELQRASWQEIKAASGLG 458 Query: 554 IVVASHVHNFFAEESNRNVISELLAEGV 581 VV+ +V + + +N+ ++ L GV Sbjct: 459 QVVSQNVETWMRQPANQQLLQRLSQAGV 486 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 124/521 (23%), Positives = 222/521 (42%), Gaps = 89/521 (17%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELR------ELETKHPELITPDSPTQRVGAAPLA 68 L+ + Y + E+ D YD+++ + R L + P+ + P+ T+R+ Sbjct: 57 LQEWDRQYQIEGVSEVSDEVYDQILAQWRRGQRCLNLPDRLPQPVQPN--TERL------ 108 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 ++H +P L L F K + L++ +V + K+DG+AV++ YENG Sbjct: 109 ----VKHPIPHTGLKK-------LEF-KEIAPWLESRHEV--WLQPKVDGVAVTLHYENG 154 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 LVS +RGDG+ G + I+ IP + +I + ++GE+F K+NE Sbjct: 155 HLVSMISRGDGSKGLNWREKADFIQGIPKTI---SIKQSIVLQGELFW------KLNEHV 205 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL---GRLLQ 245 ++ G N R+ AG L + D + F + PD +L + Sbjct: 206 QKIDGG--QNARSKVAGWLMRKDMPAQVTDDIGVFIWS--------WPDNSTPMSQQLSE 255 Query: 246 FKKWGLPVSDR----VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 G ++ R + +S + Y+ + ++ F DGVV+K S Sbjct: 256 LAMLGFDLAQRYSHPIVESQSIAQWRDHYYSI-----SMPFATDGVVLK--SFPTPSSSA 308 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A W++A+K+P + ++ V D+ F+VGR+G + +A +EPV + VS L + Sbjct: 309 WRANQNSWSIAWKYPLKSIVSDVVDLTFRVGRSGVVNVIANIEPVRIDDKKVSKIRLGSL 368 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT---HCPVCGSDVERV 418 + ++ + +GDK+ + +G P + V+ ++P + P H C S Sbjct: 369 NSWKQKDVLVGDKIQLTLSGHGAPLMEKVIWRQKPRQYLNTL-PLENFHALSCLSYSTDC 427 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + VAR T G Q +++ G+G+K VEK L +L Sbjct: 428 ASQFVARLTW---LGKQ-------------LNIRGVGEKTWMVWVEK------YGLSELL 465 Query: 479 AGKLTGLERMGPKSAQ--NVVNALEKAKETTFARFLYALGI 517 + PK+ Q N + L++A+ A +L LGI Sbjct: 466 GWLSPDWQNRLPKTQQTANALEQLQQAQHQLTANWLKGLGI 506 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 158/664 (23%), Positives = 285/664 (42%), Gaps = 109/664 (16%) Query: 19 EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVP 78 ++ Y + + D EYD L +L+ + VG +PL + + ++P Sbjct: 29 DHFYFNTEKEILTDNEYDILAEQLQ---------------STNVGCSPLIS----KTDLP 69 Query: 79 --MLSLDNVF-DEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 M SLD V+ D+E L K D+ + + KLDG++ I+ ++ L A T Sbjct: 70 LWMGSLDKVYNDKELNLWIKKVASDK--------YIIQCKLDGVSCLIINKDNKL-KAYT 120 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RG+G G DI+ ++ + + +P + +R E+ + + F + + A Sbjct: 121 RGNGKVGTDISHLIKYF------IKDKCLPNNIALRCEIIIKKETFNQKYKHA------- 167 Query: 196 FANPRNAAAGSL--RQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPV 253 F+NPR+ +G + +Q + I+ L Y + E L ++ ++ L Sbjct: 168 FSNPRSFVSGVVNRKQENIVISELNDLCLIAYELINFPVNEYQKNILTQIEIIEQ--LNF 225 Query: 254 SDRVTLCESAEEVL---AFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 V + E L A + +E + F++DG+VI LA + P+ + Sbjct: 226 IQFVNFKTISNEFLTQKALSNLFKEMKNNSLFEMDGLVI----LANTPYIRVTEGNPKHS 281 Query: 311 VAFKFPA----QEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 +AFK + ++TF+ E+ VG+TG TP + P + G VS T NA+ + Sbjct: 282 IAFKVRGDNVKEAKVTFI---EWNVGKTGVFTPKVHIVPTEINGTTVSCFTGFNANYLIE 338 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD--VERVEGEAVA 424 G+ G +++ RAGD IPQ++ V + T + FP G VE++E + Sbjct: 339 KGIGEGAIILVTRAGDAIPQIIGV------KQTGVLTFPKDYEWKGDCRIVEKIESK--E 390 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF-KLTAGKLT 483 R ++ HFV ++D+ + + I++L T +LF KLT L Sbjct: 391 RIIKQIL----------HFV--ESVDIPYIKEATINKLYNNG--CTSIELFLKLTQKDLL 436 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFL--YALGIREVGEATAAGLAAYFGTLEALEAA 541 GPK + + N+++K+ E +FL Y +GE L + L LE Sbjct: 437 ---LFGPKLSSTIYNSIQKSFEAPIEKFLSGYNAFGDYIGEKKILLLLQKYPNLFELENL 493 Query: 542 SIEELQKVPDVGIVVASHVHNFF--AEESNRNVISELLAEGV-HWPAPIVINAEEIDSPF 598 +L + +G A+ + F A+ N+I L +GV H P+ N E+ Sbjct: 494 DAIDLVSIEGIGSKTATQIKQHFINAKLIYNNIIQNKLFKGVLHTPSK--QNTVELFK-- 549 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKAQELG 656 V ++G+ + + K R G ++ +++KK ++I + +K+ KA +G Sbjct: 550 ----VCVSGTRDPLFIQELKNR----GFVLSDNITKKVKVLIVKNSNEETTKVKKANSVG 601 Query: 657 IEVI 660 I ++ Sbjct: 602 ITIL 605 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 160/684 (23%), Positives = 281/684 (41%), Gaps = 103/684 (15%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA---A 65 T++ L YH I D EYD LM L+EL +P+ ++ A A Sbjct: 23 TDIEEALSVSSEYYHNTGTSLISDQEYDILMDRLKEL-----------NPSSKIFAQVGA 71 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ +++ M S++ + +E A NK + N + KLDG++ + Sbjct: 72 PVKG-KKVKLPFWMGSMNKIKADEK--AVNKWL-----NEYSGPYVISDKLDGISCLLTI 123 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 +N TRGDGT G+DIT + I I + L E I + +RGE+ + + FEK Sbjct: 124 KNNK-TKLYTRGDGTYGQDITHLLGLIN-IDIGLL-EEIDQDIAIRGELIMSKKNFEKYQ 180 Query: 186 EDARRTGGKVFANPRNAAAGSLRQ----LDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E + AN RN G + ++ A L F+ V++ P+ L Sbjct: 181 E--------IMANARNMVGGIVNSKPESVNKDHAADVDLIFY----EVIK----PNDKLS 224 Query: 242 RLLQ-FKKWGLPV-------SDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 R L+ K+WGL V + V + ES + E + G++IDG+++ N+ Sbjct: 225 RQLKILKEWGLKVVYYNIYKTFDVNILESV---------LSERKKKSGYEIDGIIVTDNN 275 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 + + ++ P ++ AFK T V+ V + + G + P + + V ++ V + Sbjct: 276 ----KHVRNISGNPSYSFAFKGDTPTIDTVVKRVIWTPSKDGVLVPRIKFKKVRLSNVDL 331 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF---PTHCPV 410 T NA I + G + + R+GDVIP + +VV + D + + + Sbjct: 332 EYTTGFNAKYIVDNKIGSGAIINVVRSGDVIPYITHVVKPAKKPDLPNIEYVWDKNGVNI 391 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 +D+ E + R T + R + + + + I +LVE + Sbjct: 392 ILADINDNETVIIKRLTKFM----------------RNIGAENISEGITTRLVEAGFDTI 435 Query: 471 PADLFKLTAGKLTGL----ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 P + +T + ER+ K N+ N+L+ T G R G Sbjct: 436 PK-IINMTEEDFLTIDGFQERLAEKIYNNLQNSLDNLDILTLMDASNIFG-RGFGTKKFK 493 Query: 527 GLAAYFGTLEALEAASIEEL--QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 + + + + + +K+ D+ V+ F E N +++ + + Sbjct: 494 KILDVYPNIVNQYTKETDNIWRKKLLDIEGFDTITVNKFLGEMPNFQKFYKVINKTITIK 553 Query: 585 APIV-INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIA-- 641 I +N+E I F +TVV TG D + + G KV+GSVSK T L++ Sbjct: 554 PYISEVNSEGI---FQNQTVVFTG----FRNADWQKFIENEGGKVSGSVSKNTSLLVYND 606 Query: 642 GEAAGSKLAKAQELGIEVIDEAEM 665 GE + +K KA++LGI+ + ++ Sbjct: 607 GEESSAKYQKAKQLGIKTMTKSSF 630 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/382 (29%), Positives = 165/382 (43%), Gaps = 82/382 (21%) Query: 16 RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRH 75 R E Y M I D EYDRL++ E P+ I H Sbjct: 10 RCQEAYYQGMSL--ISDEEYDRLIKRFPLEEEIGPK-------------------GDIPH 48 Query: 76 EVPMLSLDNVF----DEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 131 M SL V+ D+ F + D KLDG A+S+LY NG V Sbjct: 49 LYRMYSLQKVYYGRGDKAPFNPLGQVETD--------------KLDGCAISLLYINGEFV 94 Query: 132 SAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRT 191 A TRG+G G D+T NV+ + IP K + +P ++ GEV + Sbjct: 95 QALTRGNGILGNDVTHNVKMLN-IP-KTISQKVPT--QITGEVLIT-------------- 136 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKR----PLTFFCYGVGV-LEGGELPDTHLGRLLQF 246 K N RN A+G++ D +R L F YG+ E + + +L +L Sbjct: 137 --KEVENKRNYASGAINLKDSDDFIQRIGEGGLIFVAYGIQCSAETVGITEAYLKDML-- 192 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 W L + +T+ V +F+ + PT DG V+++N + + G+ + Sbjct: 193 --W-LENENFLTVVN----VRSFFKWI----PT-----DGKVVRINDNNKFFREGWTNKF 236 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PR A A K + ++T + VE+QVG +G +TPV EPV + + ATL+N D I Sbjct: 237 PRGAFAIKEDEEGEITTLVKVEWQVGASGKVTPVGYFEPVIIDDATIVKATLNNVDYINA 296 Query: 367 LGLRIGDKVVIRRAGDVIPQVV 388 L L IG ++ + RAG VIP +V Sbjct: 297 LDLEIGCQIRVIRAGGVIPCIV 318 >UniRef50_B9YY14 DNA ligase (NAD(+)) (Fragment) n=1 Tax='Nostoc azollae' 0708 RepID=B9YY14_ANAAZ Length = 146 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 68/102 (66%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M S Q + ELR L+ Y Y+V+DAP + D YDRL REL+ELET++P L+TPDSPTQ Sbjct: 36 MTSEAQLVRELRLLLQQASYAYYVLDAPVMEDMVYDRLYRELQELETQYPYLVTPDSPTQ 95 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL 102 RVG P F+ +RH +P+ SL+N F+ E +++R + L Sbjct: 96 RVGERPATHFTSVRHNIPLYSLENAFNVEELQGWDQRWRRHL 137 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 141/565 (24%), Positives = 232/565 (41%), Gaps = 63/565 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS----PTQR 61 Q+ + L + + Y A + D YD+L L + P D PT Sbjct: 37 QETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPEDDDLPPPT-- 94 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 RH V + + DE+S + K N+ W + K+DG+AV Sbjct: 95 ---------GDARHPVAHTGVRKLADEDSVARWMK--------NKSDLWI-QPKVDGVAV 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y G LV A +RGDG GE T+ R I A+ + GE + L+ GE+FL + G Sbjct: 137 TLVYRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVLQ--GELFLRRDGH 194 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + ++TGG N R AG + + D A L F + + P Sbjct: 195 VQ-----QQTGG---MNARAKVAGLMMRADA-AAALSQLDVFIWAWP-----DGPSDMRR 240 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 R + G S + T S E +A + + P L F DGV+++ +E G Sbjct: 241 RQQLLAQAGFKYSGQYTHPVSRIEQVAQWRQRWYRSP-LPFVSDGVIVREG----REPPG 295 Query: 302 FVARAPR--WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 V + W A+K+P ++ VR + F +GR+G + VA LEP + V + Sbjct: 296 RVWSPGKGEWLAAWKYPPASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVG 355 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 + + L + +GD++ I AG IP+V VV T E PT P + Sbjct: 356 SVSRWQMLDIGVGDQLQISLAGQGIPRVDAVVWR-----TAERHKPTPPP--------AK 402 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 A+ C Q L S+ A++VDG+G+ + + ++ + LT Sbjct: 403 FNALTCYFATPECSEQFLSRLIWLSSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTV 462 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L + + Q++ + + ++ F R++ A+GI V + A L + L L Sbjct: 463 EQLQAVPGISAARGQHLWHQFDLVRKRPFIRWVLAMGI-PVPQGALAQLESENWHL--LA 519 Query: 540 AASIEELQKVPDVGIVVASHVHNFF 564 A S + + +P VG + A + F Sbjct: 520 AKSEAQWRTLPGVGEIRARQLVAFL 544 >UniRef50_Q9RFQ8 DNA ligase (Fragment) n=1 Tax=Rhodothermus marinus RepID=Q9RFQ8_RHOMR Length = 154 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 5/103 (4%) Query: 1 MESIEQQLTE-----LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITP 55 +E+I+++ E LR L H Y Y+V+D P IPDA+YD LM+ LR+LE + PEL+TP Sbjct: 30 LEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDADYDLLMQALRKLEARFPELVTP 89 Query: 56 DSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRV 98 DSPTQRVG PL F ++RH P+LSL+N F EE + +R Sbjct: 90 DSPTQRVGGPPLGRFEKVRHPEPLLSLNNAFGEEDVRVWYERC 132 >UniRef50_B7N6L0 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7N6L0_ECOLU Length = 208 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 82/154 (53%) Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 T GL+ + F R + + +G ++ QLVEK YV P D+F +TAGKLTGL+ Sbjct: 48 TYGLLNSGSPYSACWRFFEPRGVHIHQLGQTMLKQLVEKCYVQKPLDMFSMTAGKLTGLD 107 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 + GPK A + +E+AK+ L+A GI V E A LA F LEAL ASI+ L Sbjct: 108 QSGPKLASIICRGIEQAKDVQLGELLFACGIYGVEEEEAWLLAKRFSNLEALYGASIDSL 167 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 + VA + +NFF N + ++EL EG Sbjct: 168 MSYNLLNEAVAVNTYNFFRHPLNVSALNELQTEG 201 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 1030 0.0 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 937 0.0 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 930 0.0 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 928 0.0 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 922 0.0 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 907 0.0 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 901 0.0 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 898 0.0 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 896 0.0 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 891 0.0 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 891 0.0 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 889 0.0 UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 889 0.0 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 889 0.0 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 888 0.0 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 887 0.0 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 884 0.0 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 880 0.0 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 874 0.0 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 873 0.0 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 869 0.0 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 866 0.0 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 864 0.0 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 864 0.0 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 863 0.0 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 863 0.0 UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 862 0.0 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 859 0.0 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 859 0.0 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 858 0.0 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 857 0.0 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 857 0.0 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 856 0.0 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 853 0.0 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 853 0.0 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 852 0.0 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 852 0.0 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 851 0.0 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 850 0.0 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 849 0.0 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 848 0.0 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 845 0.0 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 844 0.0 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 842 0.0 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 842 0.0 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 842 0.0 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 841 0.0 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 840 0.0 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 840 0.0 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 838 0.0 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 837 0.0 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 837 0.0 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 836 0.0 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 835 0.0 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 834 0.0 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 834 0.0 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 834 0.0 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 834 0.0 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 831 0.0 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 831 0.0 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 831 0.0 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 830 0.0 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 829 0.0 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 829 0.0 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 829 0.0 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 829 0.0 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 827 0.0 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 825 0.0 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 825 0.0 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 824 0.0 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 824 0.0 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 822 0.0 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 822 0.0 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 821 0.0 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 821 0.0 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 820 0.0 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 820 0.0 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 819 0.0 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 819 0.0 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 817 0.0 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 816 0.0 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 815 0.0 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 815 0.0 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 812 0.0 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 812 0.0 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 810 0.0 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 809 0.0 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 809 0.0 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 808 0.0 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 808 0.0 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 808 0.0 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 806 0.0 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 805 0.0 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 803 0.0 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 802 0.0 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 802 0.0 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 802 0.0 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 801 0.0 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 799 0.0 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 797 0.0 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 796 0.0 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 794 0.0 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 792 0.0 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 792 0.0 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 789 0.0 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 784 0.0 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 784 0.0 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 782 0.0 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 782 0.0 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 778 0.0 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 777 0.0 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 776 0.0 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 774 0.0 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 773 0.0 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 768 0.0 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 760 0.0 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 759 0.0 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 758 0.0 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 758 0.0 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 757 0.0 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 755 0.0 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 753 0.0 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 752 0.0 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 751 0.0 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 745 0.0 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 745 0.0 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 743 0.0 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 742 0.0 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 742 0.0 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 741 0.0 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 737 0.0 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 732 0.0 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 729 0.0 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 728 0.0 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 728 0.0 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 728 0.0 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 725 0.0 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 721 0.0 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 721 0.0 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 721 0.0 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 717 0.0 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 716 0.0 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 715 0.0 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 713 0.0 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 710 0.0 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 707 0.0 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 705 0.0 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 702 0.0 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 700 0.0 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 694 0.0 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 693 0.0 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 691 0.0 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 690 0.0 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 688 0.0 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 685 0.0 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 685 0.0 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 685 0.0 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 680 0.0 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 677 0.0 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 675 0.0 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 675 0.0 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 673 0.0 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 672 0.0 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 667 0.0 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 663 0.0 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 658 0.0 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 652 0.0 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 651 0.0 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 650 0.0 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 650 0.0 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 650 0.0 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 649 0.0 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 648 0.0 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 646 0.0 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 645 0.0 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 644 0.0 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 643 0.0 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 641 0.0 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 641 0.0 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 637 0.0 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 636 0.0 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 634 e-180 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 630 e-179 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 627 e-178 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 627 e-178 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 625 e-177 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 623 e-177 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 622 e-176 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 618 e-175 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 614 e-174 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 614 e-174 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 605 e-171 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 602 e-170 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 599 e-169 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 594 e-168 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 593 e-168 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 588 e-166 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 583 e-165 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 580 e-164 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 575 e-162 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 570 e-161 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 570 e-161 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 568 e-160 UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 567 e-160 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 566 e-159 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 558 e-157 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 555 e-156 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 555 e-156 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 547 e-154 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 547 e-154 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 539 e-151 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 535 e-150 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 522 e-146 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 507 e-142 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 493 e-137 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 477 e-133 UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN 476 e-132 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 469 e-130 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 466 e-129 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 455 e-126 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 450 e-125 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 441 e-122 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 437 e-121 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 435 e-120 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 426 e-118 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 417 e-115 UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera ar... 414 e-114 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 407 e-112 UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp.... 398 e-109 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 395 e-108 UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 393 e-107 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 392 e-107 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 388 e-106 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 383 e-104 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 377 e-103 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 359 3e-97 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 351 4e-95 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 351 6e-95 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 344 6e-93 UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Provide... 333 1e-89 UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain prot... 328 5e-88 UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophon... 316 2e-84 UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage... 289 3e-76 UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schi... 289 3e-76 UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate ir... 282 4e-74 UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, s... 276 2e-72 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 266 2e-69 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 263 2e-68 UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n... 256 2e-66 UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacter... 237 1e-60 Sequences not found previously or not previously below threshold: >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 1030 bits (2663), Expect = 0.0, Method: Composition-based stats. Identities = 631/670 (94%), Positives = 655/670 (97%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELE +HP+LITPDSP+Q Sbjct: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK+ +K+TWCCELKLDGLA Sbjct: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VSILYENGVL+SAATRGDGTTGEDITSNVRTIRAIPLKL G+NIPARLEVRGEVFLPQAG Sbjct: 121 VSILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEKINE+ARRTG KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG+LEGGELPDTHL Sbjct: 181 FEKINEEARRTGNKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL 240 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 GRLLQFK WGLPVSDRVTLC+S E VL FYHKVEEDRPTLGFDIDGVVIKVNS+A QEQL Sbjct: 241 GRLLQFKAWGLPVSDRVTLCDSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMALQEQL 300 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE+TR V FPTHCPVCGSDVERVEG Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPVEFPTHCPVCGSDVERVEG 420 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF+LTAG Sbjct: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG 480 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 KLTGL+RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA Sbjct: 481 KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ASI+ELQKVPDVGIVVA+HV NFFAEESNR+VI +LLAEG+HWPAPIV+NA+EIDSPFAG Sbjct: 541 ASIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGIHWPAPIVVNADEIDSPFAG 600 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+VLTGSLS MSRDDAKARLV LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI+VI Sbjct: 601 KTIVLTGSLSLMSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIDVI 660 Query: 661 DEAEMLRLLG 670 DEAEMLRLLG Sbjct: 661 DEAEMLRLLG 670 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 391/669 (58%), Positives = 499/669 (74%), Gaps = 5/669 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I+++L LR T+ H Y Y+ +D P IPDAEYDRLMR LRE+E + P+ ITPDSPTQRV Sbjct: 7 AIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 GAAP F + H +PMLSLDN F+E+ L F++RV++RLK E + +CCE KLDG+A Sbjct: 67 GAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDGIA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+LY +G LV TRGDG+ GEDIT+NV+T++ IPLKL GE PA LEVRGE++LP+A Sbjct: 127 ISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPKAA 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+ IN+DA G K F NPRNAAAGSLRQLDPRITAKR L CY VG EG ELP T Sbjct: 187 FDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEG-ELPGTQH 245 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q ++WGL ++ ++ L A+E L +Y + R L ++IDGVV KVN + Q++L Sbjct: 246 DILTQLQQWGLKINSQMKLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDLQQEL 305 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+RAPRWA+A KFPA E+MT + V+FQVGRTGA+TPVARL+PV V GV VSNATLHN Sbjct: 306 GFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNATLHN 365 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI RL + IGD V+IRRAGDVIPQVV+VV RPE+ V P HCPVCGSDV ++EG Sbjct: 366 MDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENAVPVDRPEHCPVCGSDVLQLEG 425 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARC+GGL C AQRKE++KHF SR+AMD+DG+GD++++ LVEKE + +PA L+ L A Sbjct: 426 EAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSPASLYSLKAP 485 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GLERMG KSAQN++NA+E +K+TTFARF+YALGIREVGEATA LA +F TL+ L+ Sbjct: 486 DVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGIREVGEATAKVLAQHFPTLDLLKQ 545 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+ E+L + PD+G + A H+ +FF +E N I LL +GV WP +V + E + P +G Sbjct: 546 ATEEDLVEAPDIGPISAGHIRSFFQQEHNLETIDALLNQGVSWPEVVVRSTETL--PLSG 603 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 +T V+TG L+ SRD+AK L LGAKV+GSVS KT V+AGE AGSKL KAQ+LG++V+ Sbjct: 604 QTAVVTGVLADYSRDEAKDLLTRLGAKVSGSVSAKTGFVVAGEKAGSKLTKAQDLGVKVL 663 Query: 661 DEAEMLRLL 669 DE +LL Sbjct: 664 DEDAFKQLL 672 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 930 bits (2403), Expect = 0.0, Method: Composition-based stats. Identities = 353/669 (52%), Positives = 480/669 (71%), Gaps = 4/669 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ LR + H Y Y+V+ P IPD+ YD L EL++LE K+PE ITP SPTQRV Sbjct: 9 KIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA PL F + HE+PMLSLDNVFDE+ AF+KR++ RLK ++ + CE K+DG+A+S Sbjct: 69 GAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVALS 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +LYENG L+ AATRGDG TGE++T N RTI ++PL+L G + P +E+RGEV +P+ GF Sbjct: 129 LLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGFA 188 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K N +A + G K FANPRNAA+GSLRQLDPRITAKRPL F+ Y +G+L+G + P H Sbjct: 189 KFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCDV 248 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L FK WG+PV + + E L +Y + + R + FDIDG+VIKVNSL Q +LGF Sbjct: 249 LKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELGF 308 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 V+RAPRWA+A+KFPAQE+MT V+ +EFQVGRTGA+TPVARLEPV V+GV VSNATLHN D Sbjct: 309 VSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNFD 368 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R +R+GD V++RRAGDVIP+VV +L++RP+ + + P+ CPVC ++V + EGEA Sbjct: 369 ELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGEA 428 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 VARC GGL C AQ +ES+KHF SRRA+D++G+GDK+++ ++++ + +++L + Sbjct: 429 VARCVGGLYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKSAI 488 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 T L RMG KSA+N++ A+EK+K+TT RFLYALGIR VG+ TA LA +F L+ L AS Sbjct: 489 TALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMKAS 548 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 IE LQ++ D+G V A ++H FF ++ N +I++L+ GVHWP + + S AGKT Sbjct: 549 IETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGVHWPQEKAV----VKSEIAGKT 604 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VLTG+L ++R++A+ ++ G K SVSK TD VI GE GSK KA+ LGI +IDE Sbjct: 605 FVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLIDE 664 Query: 663 AEMLRLLGS 671 L+LL S Sbjct: 665 EAFLKLLKS 673 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 928 bits (2399), Expect = 0.0, Method: Composition-based stats. Identities = 431/697 (61%), Positives = 544/697 (78%), Gaps = 29/697 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+S+ +++ +LR L+HHEYLYHV DAPEI DAEYD L+ +LRE E+++PEL+ PDSPTQ Sbjct: 1 MKSMLEKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN--------------- 105 +VGA+P AF + H+VPMLSLDNVFDE+ FLAFNKRV +RL+ Sbjct: 61 KVGASPSTAFKPVTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDS 120 Query: 106 -----------EKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 154 E +T+CCELKLDGLAVS++YE G L AATRG+G GE+IT N+RTI++ Sbjct: 121 DQKNRSEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQS 180 Query: 155 IPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRI 214 IPL+L G+ +P R+E+RGEV++PQAGFEK+N+ AR K+F+NPRNAAAGSLRQLDP I Sbjct: 181 IPLRLKGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHI 240 Query: 215 TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE 274 TA+RPL FFCYGVG+LEGG LP +H+ RL+Q K WGLPV DR+TLC AE+V+AFY ++ Sbjct: 241 TAQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRITLCTGAEQVMAFYQEIA 300 Query: 275 EDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT 334 + R TLGFDIDG+VIKV+ + QE+LGF+A+APRWA AFKFPAQE+ T V VEFQVGRT Sbjct: 301 QARATLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGRT 360 Query: 335 GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE 394 GA+TPVARLEPV + G LVSNA LHNADEI RLGLRIGD VV+RRAGDVIPQ+VNV++ Sbjct: 361 GALTPVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIES 420 Query: 395 RPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGM 454 RP++T E++FP HCP+C S +R+EGEAV RCTGGL C AQRKE+LKHFV+RRA+D++G+ Sbjct: 421 RPQNTVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVARRALDIEGL 480 Query: 455 GDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYA 514 GDKII QLV+K+YV PADLF LT+ KL L+RM KSAQN++N+L+K+++TTFARFLYA Sbjct: 481 GDKIIHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKTTFARFLYA 540 Query: 515 LGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVIS 574 LGIREVGE TAA LA YFG L+ L A IE L+KVPDVG VVA ++ +FF E ++ VIS Sbjct: 541 LGIREVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGNEHHQQVIS 600 Query: 575 ELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 L + + WP P I E+ + PF KTVVLTGSL+ +RDD KA L+ LGAKV+GSVSK Sbjct: 601 ALESV-LDWPDPEPI--EKPNHPFRDKTVVLTGSLNAFTRDDLKAHLISLGAKVSGSVSK 657 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 KTD +IAGE GSK KA++ GI++++E E++ L + Sbjct: 658 KTDFLIAGENPGSKAQKAEKSGIKIMNEPELIEFLKA 694 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 922 bits (2384), Expect = 0.0, Method: Composition-based stats. Identities = 375/667 (56%), Positives = 477/667 (71%), Gaps = 4/667 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + LR+ L H Y Y+V+D P +PDAEYD+L REL+ LE HPEL+ DSPTQRVGA Sbjct: 29 ARAAWLRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFDSPTQRVGAL 88 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 L AF + H VPMLSL N F++E LAF+KRV + L + E+V + ELK DGLA+++ Y Sbjct: 89 ALTAFPPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATELKFDGLAINLRY 148 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 E+GVLV AATRGDG TGE++T+N+RT+RAIPL+LH N P L+VRGEV + +A K+N Sbjct: 149 EDGVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMMYKADLAKLN 208 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 R G K FANPRNAAAGSLRQLD RITA+R L FF YG+G+LEG ++P +H L Sbjct: 209 ARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMPASHSALLDW 268 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 + + G+PV + + +L FY E RP L ++IDGVV KVN + QQ QLGFV+R Sbjct: 269 YAELGIPVCSERAVVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNRVDQQLQLGFVSR 328 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APR+A+A KFPA+E +T V+D+E QVGRTGAITPVARL PV V GV V+NATLHN DE+ Sbjct: 329 APRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTNATLHNEDEVR 388 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R ++IGD V++RRAGDVIP+VV V RP R + P+ CPVCGS + R+E EA+AR Sbjct: 389 RKDIQIGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGSPIVRLEDEAIAR 448 Query: 426 CTGGLI-CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C+GG + C AQRK L HFVSRRAMDV+G+GD++++QLV+K + T ADL+KL L Sbjct: 449 CSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADLYKLGFRALAE 508 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L+RM KSAQNV++ALEK+K TT ARF+YALGIR VGEATA LA +FG L+AL AS E Sbjct: 509 LDRMADKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHFGNLDALLQASPE 568 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L +V D+G VVA+ + FF + N +I +L A GV WP +V E P AGKT V Sbjct: 569 QLLEVADIGPVVAASITAFFTDAMNIELIEQLRAAGVTWPEHVV---ENRPRPLAGKTFV 625 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG+L +SRD A ++ G KVAGSVSKKT V+AG AGSKLAKA+ELG+ ++DE Sbjct: 626 LTGTLPTLSRDAAAEKIEAAGGKVAGSVSKKTSYVVAGAEAGSKLAKAEELGVTILDETG 685 Query: 665 MLRLLGS 671 +L+LL S Sbjct: 686 LLQLLDS 692 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 907 bits (2345), Expect = 0.0, Method: Composition-based stats. Identities = 309/669 (46%), Positives = 418/669 (62%), Gaps = 11/669 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++++ LR + +H Y Y+V+D+PEI D EYD+L REL LE + PE ITPDSPTQR Sbjct: 4 EEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F+ + HEVPMLSLDN F E+ AF++RV+ L N + V + CE KLDGLAV Sbjct: 64 VGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSAL-NQQHVEYFCEHKLDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LYENG+ V +TRG+G GED+T+N++TI+ IPL+L GENIP +E+RGE F+ F Sbjct: 123 SLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLRDF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E +NE + G +FANPRNAAAGS+RQLD ITA+R L F YG G+++G + +T Sbjct: 183 EALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMDF-ETQER 241 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L Q ++WG +++ S EE L F E R L F DGVVIKVN+L + LG Sbjct: 242 FLKQCQEWGFRINEHNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWDILG 301 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A APR+A+A+KFPA+E+ T ++DV FQVGRTG ITPVA LEPV + G VS ATLHN Sbjct: 302 TTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLHNF 361 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D + +L +R GD V ++RAG VIP+++ V +R ++ PT CPVCG E Sbjct: 362 DIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEW--DG 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ K L H+ SR AMD+DG+G+ II+ LV+ V ADL+KL+ Sbjct: 420 AYLKCVN-ITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQD 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L R+ +SA + ++++K+ F R LY LGI VG TA LA +FG++ AL A Sbjct: 479 LLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +++EL + +G A + +I +L G+ E I+ P G Sbjct: 539 TMDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLKMEQ------ESIEGPLKGL 592 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V TG+L+ MSR DA + LG KVA SVSK D V+ GE GSKL KAQ+LG+ +ID Sbjct: 593 TFVFTGTLTSMSRGDAAKLVQSLGGKVASSVSKNVDYVVVGEDPGSKLDKAQKLGLTIID 652 Query: 662 EAEMLRLLG 670 E L+++ Sbjct: 653 EEAFLKMVK 661 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 322/686 (46%), Positives = 435/686 (63%), Gaps = 18/686 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + +++ LR +R+H Y Y+V+D P I DAEYD LMRELR LE HPEL+TPDSPTQR Sbjct: 4 DHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F++++H VPMLSL N DE A+ RV L N+ +V + E K+DGLAV Sbjct: 64 VGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDGLAV 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---------------IPA 166 +++Y NG+LV ATRGDG TGED+T+N+RTI IPL+L IP Sbjct: 124 TLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAVIPP 183 Query: 167 RLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYG 226 +EVRGEV++ A F ++NE +G KV ANPRNAAAGSLRQ DP ITA+RPL FF YG Sbjct: 184 LIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFFAYG 243 Query: 227 VGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDG 286 +G +EG ++ T L + G PV+ E ++ LA+ + R L +++DG Sbjct: 244 IGQIEGVQV-QTQWETLNLLRTLGFPVNRDARRFERLDDALAYCREWMTRRDELEYEVDG 302 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 VVIK++SLAQQ QLG V R PRWA+AFKFPA+E ++ + D+ VGRTG ITP A +EPV Sbjct: 303 VVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVIEPV 362 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 ++ GV V NA+LHNAD I +RIGD V+++RAGDVIP +V +++ R R P Sbjct: 363 NIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQMPA 422 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CP CG+ +ER EGE RC IC AQ ++HFVSR AMD+ G+G+K + VE+ Sbjct: 423 TCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFVERG 482 Query: 467 YVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 +V ADL+ LT +E GPK N+++A+ +K R + LGIR VGE A Sbjct: 483 WVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEVVAQ 542 Query: 527 GLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 LA +FG+L+AL AAS +E+ + +G +A+ V +FA ++ +I++L GV A Sbjct: 543 ILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGVRTEAQ 602 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA- 645 A + AGKT V+TG+L MSR++A A + G KV+GSVSKKTD ++ G Sbjct: 603 ETARASR-GNALAGKTFVITGTLPSMSREEASALITAHGGKVSGSVSKKTDYLVIGAEPG 661 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLGS 671 G+K AKAQELGI +IDEA +L L+GS Sbjct: 662 GTKFAKAQELGIPMIDEAGLLALIGS 687 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 898 bits (2322), Expect = 0.0, Method: Composition-based stats. Identities = 357/684 (52%), Positives = 463/684 (67%), Gaps = 18/684 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S+ +++ LR L H + Y+V+D P IPDAEYDRL +EL+ LE HPEL+TPDSPTQRV Sbjct: 19 SVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPELLTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRLK---NNEKVTWCCELKLD 117 G PL F+ +RH +PMLS+ D E+ F+ RV+ L ++ V + ELK D Sbjct: 79 GGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESDPPVEYVAELKFD 138 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLA+S+ YENGVLV AATRGDG GED+T N+RTIR IPL+L + P +EVRGEV++ Sbjct: 139 GLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPP-VMEVRGEVYMR 197 Query: 178 QAGFEKINEDARRT------GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL- 230 + FE +NE R G K F NPRNAAAG +RQLDP A+R L+FF YGVG + Sbjct: 198 RDEFEALNERQREKIAKGAKGEKTFVNPRNAAAGGVRQLDPAFAAERRLSFFAYGVGEIT 257 Query: 231 ---EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 EGG + +TH L K W PV+ + L A E++AF+ + R L +DIDGV Sbjct: 258 PPEEGGPVFETHFELLQTLKSWCFPVAAQTRLAYGAPELIAFHEAIGRQRDQLPYDIDGV 317 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 V KVNSLA Q ++GFV+R PRWAVA K+PAQEQ+T V ++ QVGRTG +TPVA+L PV Sbjct: 318 VYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTGKLTPVAKLAPVF 377 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 V GV V+NATLHN DE R +R+GD V++RRAGDVIP+VV+V+L +R +D + P Sbjct: 378 VGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRVQDAPQFSMPRQ 437 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CPVCGSD R EGEA RCTGGL C AQRKE++ H+ +RA++++G+GDK+++QLV+ Sbjct: 438 CPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLGDKLVEQLVDTGV 497 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 + T DL++L L L+RM KSA N+V ALEK+K+TT RF++ LGIR VGEATA Sbjct: 498 IRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGLGIRHVGEATAKA 557 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 LA +FG L+++ AS E+L +V DVG +VA + FF + NR V+ +L A GV W Sbjct: 558 LARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQLRACGVTWEE-- 615 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 A P +GKT V+TG+L +SRDDAK R+ G KVAGSVSKKTD V+AG AGS Sbjct: 616 GAPAAVAPKPLSGKTFVITGTLPGLSRDDAKDRIEAAGGKVAGSVSKKTDYVVAGLDAGS 675 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 KL KA+ LG+ VIDEA +L LL S Sbjct: 676 KLVKAEALGVAVIDEATLLALLDS 699 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 896 bits (2315), Expect = 0.0, Method: Composition-based stats. Identities = 376/729 (51%), Positives = 475/729 (65%), Gaps = 66/729 (9%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ LR L + Y+V+D PE+ DAEYDRL REL+++E +HP+ ITPDSPTQRVG Sbjct: 16 ERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHPDFITPDSPTQRVGGE 75 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-------NNEKVTWCCELKLDG 118 F+ + H+ PMLSL+N F +E AF+KRV D L E V + CELK DG Sbjct: 76 AADGFTPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAGTAEPVEYACELKFDG 135 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LA+S+ Y +G AATRGDGTTGED+T NVRTI++IPL L G++ PA L+VRGEV + + Sbjct: 136 LAISLRYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKHPPALLDVRGEVLMYK 195 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F ++NE R + FANPRNAAAGSLRQLD ++TA+RPL+FF YG+GVL+G +PDT Sbjct: 196 RDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKVTAQRPLSFFAYGIGVLDGAPMPDT 255 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H G L ++ GLPV+ + + AE +L F+ KV E R L +DIDGVV KVN +Q+ Sbjct: 256 HSGLLDWYESLGLPVNRERAVVQGAEGLLDFFRKVGEKREALPYDIDGVVYKVNRRDEQD 315 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LGFV+RAPR+A+A KFPAQE T + +E QVGRTGAITPVARLEPV V G V+NATL Sbjct: 316 RLGFVSRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVARLEPVFVGGATVTNATL 375 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVN----------------------------- 389 HN DE+ R +R+GD V++RRAGDVIP+VV Sbjct: 376 HNEDEVRRKDIRVGDTVIVRRAGDVIPEVVGRDGPHAMQVRVRFRGVRTVARRNRLRAAA 435 Query: 390 -----VVLSER---PEDTREV--------------------VFPTHCPVCGSDVERVEGE 421 + R P D R + PT CPVCGS +ER+ E Sbjct: 436 SSGRPMTWKPRLLKPTDRRGIRVRRGCLRPSLFEFVEQEPFRMPTECPVCGSRIERLPDE 495 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ARCTGGL C AQRK++L HF RRA+D+DG+G+KIIDQLVE+ V TPADLF L Sbjct: 496 AIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLFHLGFAT 555 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+R KSAQN++++LEKA+ TT ARF+YALGIR VGE+TA LA +FG L+ + A Sbjct: 556 LAALDRFAEKSAQNLLDSLEKARHTTLARFIYALGIRHVGESTAKDLAKHFGALQPIMDA 615 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 SI+ L +V DVG VVA +H FFAEE NR VI++L + P + AGK Sbjct: 616 SIDALLEVNDVGPVVAESLHQFFAEEHNRTVIAQLREKVDWPEGPPAPREPQ--GVLAGK 673 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVVLTG+L +SRD+AKA L GAKV GSVSKKTD V+AG AGSKLAKA+ELGI V+D Sbjct: 674 TVVLTGTLPTLSRDEAKALLEAAGAKVTGSVSKKTDYVVAGAEAGSKLAKAEELGIPVLD 733 Query: 662 EAEMLRLLG 670 E M +LL Sbjct: 734 EDGMHQLLK 742 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 891 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 317/672 (47%), Positives = 443/672 (65%), Gaps = 9/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES + + +L+ + +H Y+ +D PEI DAEYD L++EL LE + P+ +T DSP++R Sbjct: 5 ESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSPSRR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GAAPL+ F+ H PMLSL N F EE L F++R++ L ++E++++ E K+DG+AV Sbjct: 65 IGAAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDGVAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG---ENIPARLEVRGEVFLPQ 178 +++Y +GVL + ATRGDG GED+T N+RT+ IPLK+ E +P ++E+RGE+++ Sbjct: 125 NLIYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIYMET 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 A F K+NE G FANPRNAAAGSLRQLD ITA+RPL FCY VG++ G Sbjct: 185 AAFRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRGRAFT-Y 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H L KKWG V+ + E E+ + FY ++++ R L ++IDG+VIKV+ L+ Q Sbjct: 244 HHDVLHALKKWGFSVNPFIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLSLQT 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG V+R+PRWAVA KF A + T +RD+ VGRTG +TPVA + PV V GV VS ATL Sbjct: 304 RLGAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSRATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI++ +RIGD V+++RAGDVIP+VV V++S R P CP CGS+V R+ Sbjct: 364 HNQDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIVSNRSGREIPFKIPDTCPECGSEVVRL 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 GEA RC GL C AQ + ++HFVSR MD++G+GDK++ QLV ++ +H PADL+ L+ Sbjct: 424 AGEAAHRCI-GLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHDPADLYYLS 482 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L LERM KS N+++A+E +K + + ++ALGIR VGE + LA F TL+AL Sbjct: 483 HDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILARRFRTLDAL 542 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 + EL + D+G V+S + FF SNR VI +L GV I + +P Sbjct: 543 INTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGVSPLETISPRS----APL 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 GKT V TG+LS+M+RD+AK + LG + AG+V+KKTD V+AGEAAGSKL KAQ+ GI Sbjct: 599 TGKTFVFTGALSRMTRDEAKQIVESLGGQAAGTVTKKTDYVVAGEAAGSKLQKAQKAGIA 658 Query: 659 VIDEAEMLRLLG 670 ++ E E LRL G Sbjct: 659 ILSEEEFLRLAG 670 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 338/674 (50%), Positives = 452/674 (67%), Gaps = 10/674 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + EL L HH Y Y+V+D+PE+ DA+YD+LMREL++LE KHP L TPDSPTQ Sbjct: 4 FQKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQ 63 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG A F ++ H PM+SL N+F+++ F++R++ L + + CE KLDGLA Sbjct: 64 RVGGAAAEEFGEVVHRAPMISLANIFEDQGLTEFDERIRK-LVGLPGIAYVCEPKLDGLA 122 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 +++ YE G V ATRGDGTTGED+TSN+RTIR++P+ L ++ +P LEVRGEVF+ Sbjct: 123 IALRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDDVKVPDVLEVRGEVFIR 182 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + F+K+NE G +FANPRNAAAGSLRQLDPR+TA RPL+ F Y EG + Sbjct: 183 KKDFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPVFK 242 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 TH+ +L K GLP++ E E V Y + R L F++DG+V+KV+ Q+ Sbjct: 243 THIEKLEYLKTLGLPINQ-YRRAEGLEGVRQAYDASLKGRHELPFEVDGMVVKVDDEDQR 301 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 ++LG V+++PRWAVA+KFP +E+ T V D+ QVGRTGA+TPVA L+PV V GV V+ AT Sbjct: 302 KRLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARAT 361 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE+ R +R GD V +RRAGDVIP++V+VVLS+RP D+ FP HCPVC + + Sbjct: 362 LHNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVLSKRPADSAPFEFPKHCPVCDAVATK 421 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 E A+ RCT G C AQ E ++HF SR AMD++G+GDK+ QLV V ADL+ L Sbjct: 422 DEDGAIIRCT-GASCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYAL 480 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T L LERMG KSA N++ +LE++K+TT RFLY+LGIR VG+ATA LA F E Sbjct: 481 TKEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEM 540 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L AS+E++ +V DVG ++A +H FF E N+ I LLA GV AP V P Sbjct: 541 LFEASLEDISRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAPQV----ATGGP 596 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F GK+VVLTG+++ M+R+ AK + G KVAGSVS+KTD V+AGE AGSKL KAQELG+ Sbjct: 597 FVGKSVVLTGAMTGMTREQAKEEVERRGGKVAGSVSRKTDFVVAGEDAGSKLKKAQELGV 656 Query: 658 EVIDEAEMLRLLGS 671 ++DE L++L + Sbjct: 657 RILDEQAFLQMLQT 670 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 889 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 317/670 (47%), Positives = 422/670 (62%), Gaps = 4/670 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++++T LR L H +LY++ DAPEI DAEYDRL REL ELE HP+L P SPT RV Sbjct: 9 EAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPASPTARV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + + +PMLS+ N F +E F++RV+ L+ + VT+ E KLDG AV Sbjct: 69 GAPPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLDGTAVE 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP--ARLEVRGEVFLPQAG 180 ++YE G LV AATRGDG TGE IT N RTI ++PL L G+ +P LEVRGEV + + G Sbjct: 129 LVYEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVVMTKEG 188 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEK+N +FAN RNAAAGSLRQLD R+TA RPLT YG+G + T Sbjct: 189 FEKLNALRLERDEPLFANARNAAAGSLRQLDSRVTASRPLTLIAYGIGRFSEIDAISTQH 248 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + +G + V + V+ FY +E RP+L +DIDG+V+KV+ L Q L Sbjct: 249 EIVTRLADFGFKTNSHVRWDLDIKGVIDFYRFLEGIRPSLPYDIDGMVVKVDRLDFQRTL 308 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +R+PRW +A+KF A ++ T + ++ QVGRTGA+TPVA LEPV + GV VS ATLHN Sbjct: 309 GATSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVSRATLHN 368 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI R +R+GD V+++RAGDVIP+VV V+ R + P CPVCG+ V R Sbjct: 369 EDEIARKDIRVGDAVLVQRAGDVIPEVVQVITGRRTGNETPFQMPATCPVCGTPVVREPS 428 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAV RC C AQ KE +KHF ++ A D+DG+GDK++DQLV++ + + ADLF L Sbjct: 429 EAVTRCVNA-ACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADLFTLRVE 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG KSAQN+V A+EK++ TF FLY LG+R VG A LA F ++ L Sbjct: 488 DLESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGMRHVGAHVATLLARAFPGIDQLAE 547 Query: 541 ASIE-ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A++ +L + +G V+A V NFF+ NR + L+ GV P A + P A Sbjct: 548 AALAGQLNSIDGIGGVIAESVKNFFSNPENRQTVDSLINHGVALQFPEKEAATGHEMPLA 607 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT VLTG+L +M+RD A+ R+ G KV GSVS +TD V+AGEA GSK KA+ LG+ + Sbjct: 608 GKTFVLTGTLEKMTRDQARQRIEAAGGKVTGSVSSRTDYVVAGEAPGSKRDKAEALGVAI 667 Query: 660 IDEAEMLRLL 669 +DEA +L LL Sbjct: 668 LDEAGLLSLL 677 >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 889 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 323/671 (48%), Positives = 439/671 (65%), Gaps = 8/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++Q++ ELR L Y YHV+D P + DAEYDR M+EL +LET++PE IT DSP+ R Sbjct: 4 EAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSPSVR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A L F ++ H+ PMLSL N F+E F++RV+ + V + CELK+DGLAV Sbjct: 64 VGGAVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDGV-NVRYICELKIDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YE G + +TRGDG TGEDIT N++TI+AIPL+L E LEVRGE ++P+ F Sbjct: 123 SLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEE---VTLEVRGEAYMPKRSF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 K+NE+ + G VFANPRNAAAGSLRQLDP+I AKR L+ F YG+ +EG + +H Sbjct: 180 VKLNEEKEQNGEAVFANPRNAAAGSLRQLDPKIAAKRNLSMFVYGLADIEGKTIT-SHSE 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G + +CE+ EEV+A+ + +E RP L ++IDG+VIKV+ + QE+LG Sbjct: 239 ALDFLGELGFKTNPNRRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVTLQERLG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A++PRWA+A+KFPA+E +T + +E VGRTG +TP A LEPV VAG +V A+LHN Sbjct: 299 TTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +RIGD VV+++AGD+IP+VVNVV +R PTHCP C S + R+E E Sbjct: 359 DLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGLVRLEEE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C AQ +E L HFVSR AM++DG+G+++I QL E Y+ T ADL+ LT + Sbjct: 419 VALRCINP-ACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADLYGLTKDQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+R G KSA N+V A+E +KE + R L+ LGIR VG A LA +F T++ L A Sbjct: 478 LLQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFETMDNLVKA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA--EEIDSPFA 599 EEL+ + ++G +A + +F E ++I + GV+ + A + I S FA Sbjct: 538 GEEELKAINEIGEKMAQSIVTYFDNEDVLHLIQQFKDYGVNMTYKGIKRADLQNIASYFA 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTG L M R +AK ++ LG KV GSVSK TDLVIAGEAAGSKLA+A++ IE+ Sbjct: 598 GKTVVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVIAGEAAGSKLAQAEKHNIEI 657 Query: 660 IDEAEMLRLLG 670 +E L+ L Sbjct: 658 WNEERFLQELN 668 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 323/663 (48%), Positives = 440/663 (66%), Gaps = 6/663 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L Y+ D+P + DAEYD +RELR LE ++P+ + DSPTQRVGAA Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ F ++ + +P+ SLDNVFD++ F + RVQ L E V E K DGL+V+I Y Sbjct: 70 PVEVFGEVHYAIPLTSLDNVFDQDGFSDWLARVQKGLGR-EDVPLSAEPKFDGLSVNIRY 128 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 G LV A TRGDG TGED+T+NVRTIR +PL+L G++ P LEVRGEV +P A F ++N Sbjct: 129 IEGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAFRRLN 188 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + R G FANPRNAAAGSLRQLD +TAKRPL +F +G G L +H+ + + Sbjct: 189 GERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGESSVP-LGKSHIAVMER 247 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 WG V+ + E ++ ++++ R + F+IDG+V KV+ L +EQLGF AR Sbjct: 248 LSAWGFEVTSYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFKVDDLLAREQLGFTAR 307 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KFPA E+ T V D+ VGRTG ITPVA L+PV V GV VS A+LHN DE++ Sbjct: 308 APRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLHNQDEVD 367 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R+GD V++RRAGDVIP+VV V+ ERP T+ P CPVCGS+V R+ E+ R Sbjct: 368 RKDIRVGDTVLVRRAGDVIPEVVMVIKEERPPATQPWHMPQRCPVCGSEVLRLANESAHR 427 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C GGL C AQR +++HF SRRAMD+ G+G+K+++QLV VHT AD++ L L GL Sbjct: 428 CMGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDEAALCGL 487 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 ERM +SAQ ++ +++++ T+ RFLYALGIR+VGE TA LA YFG L+ L AA+ E Sbjct: 488 ERMASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYFGDLDPLMAATPEL 547 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 LQ +PDVG +VA V +FFA+ NR+VI+ L A GV W + + F G T+VL Sbjct: 548 LQNIPDVGPIVAESVAHFFAQPHNRDVIAALRAAGVQW----AVVQPQKGGRFQGMTLVL 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L M+R++AK + G KV+GSVS KT V+ G+ GSK KA +LG++ + EA+ Sbjct: 604 TGALDNMTREEAKTAIENAGGKVSGSVSAKTSYVVVGKDPGSKAEKAAKLGVKQLTEAQF 663 Query: 666 LRL 668 L + Sbjct: 664 LAM 666 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 888 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 342/701 (48%), Positives = 459/701 (65%), Gaps = 34/701 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +Q++ +LR + H+Y Y+V+D P I DAEYD L REL+ LE +P+L++ DSPTQR Sbjct: 9 EQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSDSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V F + H+ PMLSLDN F+ + + F++R++DRL V + E KLDG+++ Sbjct: 69 VAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRL-GVASVVYTGEPKLDGISL 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y++G LV A TRGDG TGED+T+NVRT+R++PL+L G+ P RLEVRGEV + + F Sbjct: 128 SLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIRKEDF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N+ G + FANPRNAAAGSLRQLDPRITA+RPLT F +GVG + ++H Sbjct: 188 ERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDPLALGV-ESHWQ 246 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L WG + + E A+ ++ E+R L F+IDG V KV+ LA +EQLG Sbjct: 247 VLECLAGWGFRTTAPLEHLEGVSACQAYRDRLIEERDALPFEIDGAVFKVDDLAVREQLG 306 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F ARAPRWA+AFK PA+E T V + VGRTG ITP+ARL+PV V+GV V+ A+LHNA Sbjct: 307 FTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARASLHNA 366 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH---CPVCGSDVERV 418 DE+ R+ +R GD V++RRAGDVIPQ+ +VVL++RPE + F CP CGS V+R+ Sbjct: 367 DELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGSAVQRI 426 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGEA RC GGL C AQR+ ++ HF SRRA+D+DG+G+KI++QLV K V ADLF+L Sbjct: 427 EGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLADLFRLG 486 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA-YFGTLEA 537 +L GLERMG KSA N++ AL++A+ TT ARFLYALGI VGE TA LA +G + A Sbjct: 487 HAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIPHVGEVTARRLAEAAYGLMVA 546 Query: 538 ----------------------------LEAASIEELQKVPDVGIVVASHVHNFFAEESN 569 + AA ++L+ + DVG VVA + FFAE N Sbjct: 547 VPRGDRAALRAAAGLDAQTAITSEALLRVMAAPADDLEAIEDVGPVVARAIAGFFAEPHN 606 Query: 570 RNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVA 629 R V+ L A GVHWP P E S AG+ V+TG+L M+RD+AKA + G +V Sbjct: 607 RQVVDHLCAAGVHWPEPDPPEQAESVSSLAGRAFVVTGTLETMTRDEAKAAIEACGGRVT 666 Query: 630 GSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 GSVS+KTD ++AG AGSKL KA+ELG+EV++E+ + LL Sbjct: 667 GSVSRKTDYLVAGADAGSKLNKARELGVEVVNESGLRELLA 707 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 887 bits (2292), Expect = 0.0, Method: Composition-based stats. Identities = 311/678 (45%), Positives = 433/678 (63%), Gaps = 11/678 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + T+L +R H+ Y+V P I D YDRL EL +LE K P+LIT DSP+QR Sbjct: 4 NEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSPSQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V PL F + H PM+SLDN + ++ F RVQ L NE + W E K+DG+A+ Sbjct: 64 VSGEPLKEFKPVHHLSPMMSLDNTYSQQDVRDFVGRVQRLLP-NETLEWILEPKVDGVAI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIP--LKLHGENIPARLEVRGEVFLPQA 179 ++ YE GV V ATRGDGTTG+D+TSN++TIR+I LK G +P +E+RGEV+LP+A Sbjct: 123 NLKYEKGVFVCGATRGDGTTGDDVTSNLKTIRSIAGKLKASGRKLPDVVEIRGEVYLPKA 182 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + G + FANPRN+AAGSL+QLDPRI AKRPL YG+GV EG E P H Sbjct: 183 AFTKINAERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGAERPKEH 242 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L K G ++ C SA+E++ +++++ R ++ DG VIK+NS A +E+ Sbjct: 243 DEVLAWLKSAGCKTPEKTWKCCSADELIDAINELDQLRRKFTYETDGAVIKLNSFALRER 302 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 +GF ++APRWA+A+K+ A++ T ++ + QVGRTGA+TPVA LEPV +AG +S ATLH Sbjct: 303 IGFTSKAPRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGSTISRATLH 362 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DE+ R +R+GD V I +AG+VIP VV VVL++R + FPTHCP CGS V R E Sbjct: 363 NEDELRRKDIRVGDTVTIEKAGEVIPAVVGVVLTKRTGKEVQFQFPTHCPECGSKVARTE 422 Query: 420 G------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 G V RC C AQ + ++H+ +R AMD++G G+ ++ QLV K V +D Sbjct: 423 GTENGAAGVVWRCLNA-ACPAQIRGRIEHWCARGAMDIEGGGEALVSQLVTKGLVREVSD 481 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L+ LT ++ GLERMG KSAQN ++ ++ +K R L+ LGI VG A L F Sbjct: 482 LYSLTLDQVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILHVGAGVAKRLGRRFT 541 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 TL+ + AAS E+L +V D+G V+A + + E NR +I L G+++ + + A Sbjct: 542 TLDDIFAASQEQLTEVEDIGEVIAHSIVQWHQEPKNRELIELLRKAGLNFNSELYKPAAA 601 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + FAGKT VLTG+L + R++A A++ LG KV+GSVSKKTD ++AGE AGSKL KAQ Sbjct: 602 LGH-FAGKTFVLTGTLPTLKREEAAAKIEALGGKVSGSVSKKTDYIVAGEDAGSKLEKAQ 660 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LG+++IDEA L+L + Sbjct: 661 KLGVKIIDEAAFLKLCAN 678 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 884 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 312/669 (46%), Positives = 436/669 (65%), Gaps = 10/669 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 IE+++ ELR L +H + Y+V DAPEI D EYD L REL +LE + P+LITPDSPTQR+ Sbjct: 2 DIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRI 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PL F ++ H V M SL +VF E LAF++RV++ + + V + E K+DGL+VS Sbjct: 62 GGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVG--DDVEYVVEKKIDGLSVS 119 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YENGV ATRGDG GED+T N++TIR IPL+L ++P LEVRGEVF+ + F Sbjct: 120 LVYENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLK-RDLP-LLEVRGEVFISKKDFI 177 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 KINE+ G ++FANPRNAAAGSLRQLDP++T++R L F + + +EG TH Sbjct: 178 KINEEQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEGQSF-KTHSET 236 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L K+ G S +C+ V +++ E+R + F+IDG V+KVNSL Q+E LG Sbjct: 237 LEFLKELGFKTSPGYKVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGS 296 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +APRWAVA+K+PA+ + T V+ + VGRTG +TP+A +PV +AG VS ATLHN D Sbjct: 297 TIKAPRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMD 356 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I+ +RIGD V IR+AGD+IP+VV+VV +R + E P CPVCG+DV R EGEA Sbjct: 357 YIKEKDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEA 416 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK- 481 RCT G+ C AQ + HF SR AM+++G+G II+ L+EK + ADL+ L K Sbjct: 417 AYRCT-GIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKE 475 Query: 482 -LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L +ERMG KS +N++ ++EK+K+ R ++ GIR +G A L+ F +L+AL Sbjct: 476 TLVNIERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMN 535 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 AS E++ +P+ G +A V FF ++ NR+ + +L A GV+ + + D+ F G Sbjct: 536 ASAEDIMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVNTVS--FGKKKIKDNRFEG 593 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT VLTG+L +R +A+ + G K +GSVSKKTD V+AGE AGSKL KA+ELGIE+I Sbjct: 594 KTFVLTGTLPSFTRKEAEEIIKSFGGKTSGSVSKKTDYVLAGEDAGSKLQKAKELGIEII 653 Query: 661 DEAEMLRLL 669 DE + +++ Sbjct: 654 DEDKFRKMI 662 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 303/668 (45%), Positives = 409/668 (61%), Gaps = 9/668 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + Q++ ELR + H Y Y+V+D P I D EYD LM+EL LE +PEL TPDSP+QRV Sbjct: 5 AARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSPSQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G AP F+Q+RH +LSL++ F+E L F++RV+D V + E K+DGLAV+ Sbjct: 65 GGAPREEFNQVRHPQVLLSLNDAFNEGDLLEFDRRVRDLAGR--PVEYVIEAKIDGLAVA 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y +G+ ATRGDG GE++T+N++TI A L L L VRGEV++P+ F Sbjct: 123 LTYRDGLFTLGATRGDGQVGEEVTANLKTIPA--LPLRLRRPLPFLVVRGEVYMPKVAFT 180 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N G +FANPRNAAAGSLRQLDP+ITA R L+ F Y V L G E+ T G Sbjct: 181 ALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVYQVISLTGAEVA-TQAGA 239 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G PV+ + + VL E R +L ++IDG+VIKVN LA LG Sbjct: 240 LDFLAELGFPVNPYRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVNDLALHSVLG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A+APRWA+A+KFPA++ V + +VGRTG +TP A L PV +AG VS ATLHN Sbjct: 300 ATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTTVSRATLHNE 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +RIGD V++++AGD+IP+VV V+ R P CP CG+ V R GE Sbjct: 360 DYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACGAAVVRPPGE 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A RCTGGL C AQ E + HF SR AMD+ G+G I+ QL+E +H ADL+ L Sbjct: 420 AAHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIHDAADLYYLKEED 479 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LER G +SA N++ A+ +K+ R ++ALGIR VG+ A LA +FG+L+ L AA Sbjct: 480 LLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLADHFGSLDKLAAA 539 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 ++EEL +PD+G +A ++ FF E NR V+ +L GV A +NA P GK Sbjct: 540 TVEELTALPDIGPRIAENIREFFGEPRNRAVLEKLKKAGVRLEA---LNAAAPAGPLTGK 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 VLTG+L M+R +A+ + G KV+ SVS+KTD V+AGE GSKL +A+ELG+ VI+ Sbjct: 597 VFVLTGTLPGMTRQEAEELITRAGGKVSSSVSRKTDYVVAGEKPGSKLDRARELGVPVIN 656 Query: 662 EAEMLRLL 669 + +LL Sbjct: 657 ADGLRQLL 664 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 874 bits (2258), Expect = 0.0, Method: Composition-based stats. Identities = 324/690 (46%), Positives = 425/690 (61%), Gaps = 25/690 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + ++ ++ LR + HH YLY+ DAPEI DA +D LMRELRELE +P+ I P SPTQ Sbjct: 16 VSDVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELANPQYIDPTSPTQ 75 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG FS +RH V M SLDN + + R + + V +CCELK+DG + Sbjct: 76 RVGGYVGEQFSPVRHAVRMYSLDNAMGLDELDEWLARTLEAIG--HPVQFCCELKIDGSS 133 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR------LEVRGEV 174 +++ YE GVL AATRGDGTTGED+T N+RT+R IPL+L + + +EVRGEV Sbjct: 134 IALTYEAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDSDASIEVRGEV 193 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 ++P++ FEK+N A TG + FANPRNAAAGSLRQ DP+IT R L F Y + + Sbjct: 194 YMPKSSFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFLYAIAD-DAPI 252 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 ++ L + G V+ V LC++ +EV F +V E R +L + IDGVV+KVN Sbjct: 253 RAESQNDLLEWLRDCGFHVNPDVKLCDTPQEVHDFCEQVAEKRDSLPYGIDGVVVKVNDF 312 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q +GF ARAPRWA+A+KFP +E+ T + D+ QVGRTGA TPVA L+PV V G V+ Sbjct: 313 ATQRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELDPVLVDGSTVA 372 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN DE+ R +RIGD V++R+AGDVIP+++ VLS RPE + P CP CGS Sbjct: 373 RATLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEMPATCPSCGSP 432 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + R EGEA RC + C AQ E L H+ SR AMD+DGMGD+I+ +LVE V AD Sbjct: 433 LVREEGEAAFRCV-SIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVESGRVLDVADY 491 Query: 475 FKLTAGKLTGLE-----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 + LT L LE +G A ++ +LE +K TFAR L+ LGIR VG+ Sbjct: 492 YNLTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFGLGIRHVGKT 551 Query: 524 TAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 T +AA + ++E L A+ E L +V +G V+A + F A E NR VI L GV Sbjct: 552 TGEAIAAAYPSMEKLMNATEEGLAQVDGIGAVIAKSIVTFLATEDNREVIHRLERAGVTM 611 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSL--SQMSRDDAKARLVELGAKVAGSVSKKTDLVIA 641 + +I AG T VLTGSL S M+R +A RL +GAKV+GSVSKKT V+A Sbjct: 612 ADE--VKESDIPQTLAGITFVLTGSLTESGMTRTEAGDRLKAMGAKVSGSVSKKTGYVVA 669 Query: 642 GEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 GEAAGSK KA +LG+ V+ EAE LRLL + Sbjct: 670 GEAAGSKYDKAVQLGVPVLTEAEFLRLLEA 699 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 873 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 312/669 (46%), Positives = 425/669 (63%), Gaps = 11/669 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 Q++ ELR +R+H Y+V DAPEI DAEYD L REL ELE++ PEL+TPDSPTQRV Sbjct: 19 EARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 G PL F ++RH VPMLSL N E ++ RV+ L E+ + + ELK+DGLA Sbjct: 79 GGEPLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGLA 138 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ YENG LV ATRG+G GED+T +RTIR++P +L ++ P LE RGEV++ Sbjct: 139 VSLRYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLD-DDPPGVLEPRGEVYIKLKD 197 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE+ N + G + FANPRN AAGS+RQLDPR+TA+RPLT + YGVG EG E ++H Sbjct: 198 FEEFNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVG--EGYENFESHS 255 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L +++GL V+ T+ + V+ + + R L F +DGVV+KV+S QQE+L Sbjct: 256 EALAALRRYGLRVNPH-TVHGDIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERL 314 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G V +APRWA+A+KF T +RD+ VGRTGA+TP A LEPV+V GV +S ATLHN Sbjct: 315 GAVQKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHN 374 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ G+ IGD V++ RAGDVIPQVV V ER D E P CPVCG V R EG Sbjct: 375 EDYIKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPEG 434 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EA+ RC + C AQ E + H+ SR AMD++G+G+K+ +L + + ADL++L A Sbjct: 435 EAITRCAN-VRCPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRAE 493 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L LE +G KSAQN++ A+E++KE F R L+ LGIR VG ATA +A F E L Sbjct: 494 QLAPLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGIRHVGSATAELIAERFSGEELLRG 553 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 +EEL ++ VG +VA V +F+ E NR ++ L+ G+++ E P +G Sbjct: 554 VGVEELTQIEGVGEIVARAVVEYFSLEENRKLVRRLMEHGLNFGPVRGKPEE---GPLSG 610 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 + +V+TG+LS+ R + + G V SVS+ TD ++AGE GSKL +A+ELG+ V+ Sbjct: 611 RRLVITGTLSR-PRSEISDLIEGAGGTVTSSVSRNTDYLVAGENPGSKLERARELGVPVL 669 Query: 661 DEAEMLRLL 669 DE + RLL Sbjct: 670 DEEGLRRLL 678 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 869 bits (2247), Expect = 0.0, Method: Composition-based stats. Identities = 299/669 (44%), Positives = 417/669 (62%), Gaps = 6/669 (0%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I++++ +L L +H Y Y+V+D+P I D EYD ++R L+ELE K I PDSPTQR Sbjct: 6 EDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKW-GYILPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGAAP F + H PMLSLDN F E F+ RV+ L ++E+V + E K DGLAV Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEELRDFDARVKRLLGSSEEVEYTVEPKYDGLAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-ENIPARLEVRGEVFLPQAG 180 + Y++G+L A+TRGDG GEDIT N++TI+AIPL++ G + IP +++RGEV+L Sbjct: 125 ELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIPEEIDIRGEVYLNIDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE+IN++ G VFANPRNAA+GS+RQLDP ITA R L CYG+G ++G E + + Sbjct: 185 FERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIEF-KSQI 243 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + KK PV V L + EEV+ ++E+ R F+ DG V+KVNS Q +L Sbjct: 244 EFIEWLKKGRFPVPAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFELQRKL 303 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G R PRWA+A+K+PA + +T ++D+ VGRTG ITPVA LEPV + GV VS +TLHN Sbjct: 304 GTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSRSTLHN 363 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+ER +R+GD V++ RAG+VIP ++ VV R + +EV P HCPVCGS R G Sbjct: 364 WDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKTVREPG 423 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E +C C AQ +E +KHF SRRAM+++G+GDK ++ L K + DL+KL Sbjct: 424 EVAVKCIN-FNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYKLRQE 482 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GL S++ ++ A+ K+K+TT +R LYALGI +VGE + LA +F LE L Sbjct: 483 DIKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLEDLYH 542 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 E+L ++P +G A + FF E N I EL G+ P E+ SP G Sbjct: 543 IKAEKLVQIPQIGEKTAKTIEQFFNNEENLKAIEELKRMGLKVENPEF-EEEKKPSPLKG 601 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 T V+TG+L + R++ K + + G KV+ SVSK TD ++ GE GSKLAKAQ L ++ + Sbjct: 602 LTFVITGTLPK-PREEVKEMIEKAGGKVSSSVSKNTDYLLVGEDPGSKLAKAQALRVKTL 660 Query: 661 DEAEMLRLL 669 E L++L Sbjct: 661 SYEEFLKML 669 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 300/707 (42%), Positives = 415/707 (58%), Gaps = 52/707 (7%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I Q++ ELR ++ Y Y+V+DAP + D YD+L REL++LET++PEL+TPDSPTQRV Sbjct: 19 EIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR-------LKNNEKVTWCCELK 115 G P F ++H +P+ SL+N F A+ R Q + + CELK Sbjct: 79 GEQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQAIGEQSATLRSPEYVCELK 138 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DG A+++ YENGVLV ATRGDG GEDIT+NVRTIR+IPL+L + P +EVRGE F Sbjct: 139 IDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEVRGEAF 198 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-------- 227 LP F ++N++ + G +FANPRNAAAG+LRQLD RI AKR L FF Y + Sbjct: 199 LPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAKRRLDFFAYTLHLPLASAR 258 Query: 228 -----------------------------------GVLEGGELPDTHLGRLLQFKKWGLP 252 LP T L ++ G Sbjct: 259 SATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTHLPQTQWQSLELLQQIGFR 318 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 V+ LC + +V +Y R L + DGVV+K+NSL QE LGF + PRWA+A Sbjct: 319 VNPHRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSLRLQEHLGFTQKFPRWAIA 378 Query: 313 FKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIG 372 +K+ ++ +T V ++ VGRTGA+TPVA L PV +AG VS ATLHN D + L L IG Sbjct: 379 WKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVSRATLHNRDRLAELDLHIG 438 Query: 373 DKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLIC 432 DKVVI +AG++IP+++ V RP D R PTHCP CG V + EAV RC + C Sbjct: 439 DKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQPVVQPVDEAVTRCLN-VSC 497 Query: 433 GAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS 492 A + ++ H+V R AMD+DG+G+K++ QLV++ V++ ADL++LT +L LERMG K Sbjct: 498 PAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLERMGNKL 557 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 A+ VV A+ K++ ++R LY LGIR VG A L F ++E L AAS E+++ V + Sbjct: 558 AEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIEAVHGI 617 Query: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV-INAEEIDSPFAGKTVVLTGSLSQ 611 G +A + +F +N ++I +L A GV V + ++ P AGKT VLTG+L Sbjct: 618 GPEIAQSIVQWFQTPANHSLIEQLSAAGVQLAQDTVAVPPSQLPQPLAGKTFVLTGTLPT 677 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +SRD+A++ + + G KV SVSKKTD ++ G AGSKL KA +LGI Sbjct: 678 LSRDEARSMIGQAGGKVTDSVSKKTDFLVVGADAGSKLDKAGQLGIP 724 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 298/667 (44%), Positives = 425/667 (63%), Gaps = 4/667 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++L LR +R H+YLY+V PEI D EYDRLM++L +E PEL+TPDSPTQRV Sbjct: 7 EILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P+ Q+ H PMLS++N + E F +R L E V W ELK+DG+A+S Sbjct: 67 GEEPMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSLDG-EAVEWVVELKVDGVAIS 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG+LV A TRG+G G+D+T NVRTI +PL+L+G+ IPA LEVRGEV++ + Sbjct: 126 VRYENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDLV 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N+ + G +++AN RN A+G++R LDP++ A+R L +GVGV EG + H+ Sbjct: 186 LLNKRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEGMTA-ENHMQF 244 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L Q GLP + + E + + ++ E L F++DG+V+KVN Q+ +LG Sbjct: 245 LEQVSSLGLPPTPHCKCFATFSEAVKYCEEIPERLHELDFEVDGLVLKVNRFDQRAKLGQ 304 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +++PRW +A+KF E T + + QVG+TGAITPVA LEPV +AG VS A+LHNAD Sbjct: 305 RSKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLHNAD 364 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 EI R +RIGD VV+ +AG +IP +V V +ER D FPTHCPVCGSDV + EG Sbjct: 365 EIVRKDIRIGDIVVVEKAGKIIPHIVRVEAAERTTDLPVFQFPTHCPVCGSDVAKDEGGV 424 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RCT C AQ +E L+ F +R AMD++G+GDK++DQLV + V DL++LT KL Sbjct: 425 YIRCTNP-SCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRLTLDKL 483 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 T LERMG KSA ++ + +K +R L L IR +G + LA +FGTL+A+ A+ Sbjct: 484 TSLERMGEKSATKLLEGIVASKSRPLSRLLNGLSIRHIGSNGSQVLARHFGTLDAIRQAT 543 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E+L +V +VG + A+ V+ F + + I +L+A G++ P + FAGKT Sbjct: 544 LEDLSRVSEVGEITAASVYEFLHSDYGKTTIDDLVALGLNTQEPKSAIPTG-EGIFAGKT 602 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V+TG+LS+ SRD+ + + + G K + SVSKKTD ++AG AGSKLAKA+ LG++++ E Sbjct: 603 FVVTGTLSKFSRDEVEDLIEKHGGKASSSVSKKTDYLLAGAEAGSKLAKAESLGVKILSE 662 Query: 663 AEMLRLL 669 A+ + LL Sbjct: 663 ADFIALL 669 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 864 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 321/675 (47%), Positives = 444/675 (65%), Gaps = 13/675 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +Q +LR LR+HE+ Y+V+D PEI DA+YD +M EL+ LE KHPEL+TPDSPTQR Sbjct: 5 KDPAKQAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P F ++ H PMLSLDN ++EE + +RV++ L ++ + CELKLDGL++ Sbjct: 65 VGGKPREGFVKVAHSAPMLSLDNAYNEEELRDWARRVEE-LSGKAEIEYECELKLDGLSM 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP-----ARLEVRGEVFL 176 ++ Y++ V A TRGDG+ GED+T N+RT++++PL + + EVRGEV Sbjct: 124 ALRYQDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEVRGEVIF 183 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 P FEK+NED + G FANPRNAAAG++R L+P ITA+R L F+ Y + +++G Sbjct: 184 PTKSFEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFL-LVDGRVHI 242 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 D L +K G V+ + +S ++VL F HK EEDR L ++IDGVVIKVNS A Sbjct: 243 DRQSEALDTLEKLGFKVNSNRAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVIKVNSTAL 302 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++LGF +APRWA+A+K+ A+ +T V D+ QVGRTG +TPVA L+PV + G VS A Sbjct: 303 WQRLGFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIGGTTVSRA 362 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE-RPEDTREVVFPTHCPVCGSDV 415 TLHN DEI+RLGL IGD V + R GDVIP+VV V+ + P ++ P CP CG V Sbjct: 363 TLHNMDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERCPECGGHV 422 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 R EGEA RC C A+ +ES+ HF SR M+++GMGD +++QLV++ V AD++ Sbjct: 423 VRTEGEADHRCVNA-NCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVKNVADIY 481 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L KL LERMG KSAQN+++ ++ K+ R +Y LGIR VGE TA LA +FG+L Sbjct: 482 ELDEEKLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGIRMVGERTAQFLAEHFGSL 541 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 + + A+ EEL +V +VG +A +H FFAE SNR ++ L A G+ + +E Sbjct: 542 DGVMKATEEELLEVEEVGPRIAQSIHEFFAEPSNRELVKRLEAAGLQFKGVK----KERG 597 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 + AG+T VLTGSL SRD+AK + + G KV+GSVSKKT+ V+AGE AGSKL KA++L Sbjct: 598 TALAGQTFVLTGSLPTYSRDEAKKLIEDAGGKVSGSVSKKTNYVVAGEEAGSKLDKARDL 657 Query: 656 GIEVIDEAEMLRLLG 670 G+ VIDE + +LLG Sbjct: 658 GVAVIDEDALKKLLG 672 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 343/662 (51%), Positives = 454/662 (68%), Gaps = 2/662 (0%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I +L LR T+R HEY Y+V++AP I D+E+D LM++LR LE I DSPTQRVG Sbjct: 8 IAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADSPTQRVG 67 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F + H + MLSLDNVF+ + F F +R+Q++L ++ E K DGLA+++ Sbjct: 68 GKADNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFDGLAINL 127 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG+L A+TRGDG TGED+T NVRTI IPL+L+ P +E+RGE+++P+ F Sbjct: 128 RYENGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMPKKAFYA 187 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE A G K+FANPRNAA+GSLRQLDPRITA+R L FF YG G + +LP+T+ L Sbjct: 188 LNEQAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPETYEALL 247 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 Q++ W +PV + E LA Y + + R L FDIDGVV KVN A Q++ GF+ Sbjct: 248 EQYRAWHIPVCSLHQKAATLPEALAAYQQFAKQREQLPFDIDGVVFKVNRFADQQRAGFL 307 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 ARAPRWA+A+KFPA E+ T + +E QVGRTGA+TPVARL+PV +AGV+V +A+LHNA E Sbjct: 308 ARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSASLHNARE 367 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I R +R+GD + IRRAGDVIP+VV+VVL +R D P HCPVC + + + E EAV Sbjct: 368 IARKDIRVGDTIFIRRAGDVIPEVVSVVLEKRLPDAPVFAMPEHCPVCAAAIVQNEDEAV 427 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 ARC+GGL C AQR +L HF SR A+D+ G+G+K+I QLV +E+V TPADLF LTA Sbjct: 428 ARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCLTADDWA 487 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 L RMG KSA NV+ A++ AK+TT ARF+YALGIR VG A LAA+FG L A AA Sbjct: 488 SLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGIRGVGSVNAQALAAHFGDLAAFMAADR 547 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 LQ++ +G VVA+ + +FFA+E NR VI+ ++A GVHW + ID+P GKTV Sbjct: 548 AALQEIEGIGDVVAADIEHFFADEDNRAVIAAIVAAGVHWSTELTKKI--IDAPLLGKTV 605 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TG+L +SR +A+ RL LGAKV VS++TD ++ G AGSKLA+AQ + +IDEA Sbjct: 606 VITGTLPSLSRAEAQKRLETLGAKVTSQVSRQTDFLLLGADAGSKLARAQAFSVPIIDEA 665 Query: 664 EM 665 ++ Sbjct: 666 QL 667 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 863 bits (2230), Expect = 0.0, Method: Composition-based stats. Identities = 280/672 (41%), Positives = 406/672 (60%), Gaps = 13/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + +++ LR + +H Y Y+V++ P I D EYDRLMR L ELE +PEL+TPDSPTQR Sbjct: 13 KEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQR 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L F ++H VPMLSLDN ++EE + F+KRV+ L+ +E V + ELK+DG+++ Sbjct: 73 VGGKVLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESE-VEYVAELKIDGVSI 131 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YENG V ATRGDG GED++ NV+TIR++PL+L P +EVRGE+++P F Sbjct: 132 ALRYENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLRK---PLTIEVRGEIYMPVDEF 188 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +++NE+ G FANPRNAAAG+LRQL+ + A R L F Y V E L T Sbjct: 189 KRLNEEREEEGLPPFANPRNAAAGTLRQLNTALVASRRLDSFIYYVVHPENYGL-KTQWE 247 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K+ G V+ LC++ +EV+ ++ + +E + L + +DGVV+KVN Q+ LG Sbjct: 248 ALQFLKEIGFKVNPHSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQKVLG 307 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 ++APRWA+AFKFPA++ T + DV QVGRTG +TPVA LEPV +AG +V A+LHN Sbjct: 308 ETSKAPRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHNF 367 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER-VEG 420 + I +RIGD V + +AG +IPQ+V + R +E+ P CPVCG V + Sbjct: 368 EYIREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSPD 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C A+ K +L+ FVSR A+D++G+G+KIID+LV+ V AD+F LT Sbjct: 428 EVAIRCLNPH-CPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPF 486 Query: 481 KLTGL-ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L L +G ++ ++ +E+AK+ + + LGI VG+ TA LA +F +LEA+ Sbjct: 487 DLAQLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIA 546 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS E L+ +P +G +A + +F R +I +L GV V Sbjct: 547 EASYETLKDIPGIGPEIARSIVEYFRNPKTREIIEKLKKAGVKLEEKTV-----KYDVLK 601 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T +TG+L +R++ L LGA+V SVSK TD +I GE GSK KA+ L ++ Sbjct: 602 GLTFAVTGTLKNFTREEIIEFLERLGARVVNSVSKNTDYLIVGENPGSKYEKAKALKVKT 661 Query: 660 IDEAEMLRLLGS 671 + E E LR + + Sbjct: 662 MSEEEFLRFVEN 673 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 322/667 (48%), Positives = 439/667 (65%), Gaps = 6/667 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 Q++ ELR +R H+Y Y+V+DAPEI DAEYDRLMREL +LE HPEL+T DSP+QRV Sbjct: 12 DAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQRV 71 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PLAAF + H VP+LSL N D++ F++ + R + + +T+ E K+DGL V Sbjct: 72 GGQPLAAFRAVSHRVPLLSLANAVDDQDLREFDR--RARERADRPLTYVVEPKIDGLTVV 129 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YE G + AATRGDG GEDIT N++T+RA+PL+L + LEVRGE +LP+A F Sbjct: 130 LSYEEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLKRD--IKSLEVRGEAYLPKAAFA 187 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+ G FANPRNAAAGSLRQLDP++TA RPL + Y + LEG + + Sbjct: 188 RLNEEREEAGEAAFANPRNAAAGSLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEA 247 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + GLPV+ C + ++V+ + E R L ++IDG+V+KVN L Q LG Sbjct: 248 LQMLEDLGLPVNPERRYCRTIDDVIDYCRYWTEHRHDLPYEIDGMVVKVNELDQYPLLGE 307 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A++PR+A+AFKFP ++ +T VRD+ +VGRTG ITP A LEPV +AG VS ATLHN D Sbjct: 308 TAKSPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRATLHNED 367 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I + IGD VVI++AGD+IP+V++V+ +R + R P CP C S V R++GEA Sbjct: 368 IIRERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVSRLKGEA 427 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RCT L C AQ KE L HF SR AM+++G+G +++ L E V PADL+ LTA ++ Sbjct: 428 AIRCT-SLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLYDLTAEQV 486 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LERMG KSA N++ A+E +K A ++ALGIR VG+ A LA +FG+++ L A+ Sbjct: 487 APLERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSMDQLMKAT 546 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EELQ V ++G +A + +FA +NR +I L +G+ +A + FAGKT Sbjct: 547 TEELQAVSEIGPKMAESLQRWFAVPANRQMIDRLAEKGLQMETEKAGDA-GVPQTFAGKT 605 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG+L+ + R +A+ L E GAKVA SVSKKT LVIAGEAAGSKL KA+EL I ++ E Sbjct: 606 VVLTGTLTTLDRREAQRLLEERGAKVASSVSKKTSLVIAGEAAGSKLEKAKELNIPILSE 665 Query: 663 AEMLRLL 669 A+ L+L+ Sbjct: 666 ADFLQLI 672 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 304/667 (45%), Positives = 393/667 (58%), Gaps = 12/667 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ EL +RHH+ LY+ ++PEI D EYD L REL +LE P+L PDSPT RV Sbjct: 5 AARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSPTLRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 +P AF ++ H PMLSLDN E F +R+ D L + V CE KLDGLAVS Sbjct: 65 SGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPV--VCEPKLDGLAVS 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +LY GVL+ TRGDG+ GED+TSNV TIR +P ++ + LEVRGEV++ + F Sbjct: 123 LLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRI---DYMGELEVRGEVYMSRRDFA 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N+ G FANPRNAAAGSLRQLDPR+TA+R L+ F Y V L T Sbjct: 180 ALNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGL-KTQEEL 238 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 LL K PV + LC EEVL + + R + D DGVVIK++SL +E LG Sbjct: 239 LLWLKGRSFPVQEDFRLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREVLGS 298 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 R+PRWAVAFKFP +E+ T V +E VGRTG +TP A LEPV ++G V A+LHN D Sbjct: 299 TNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFD 358 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R +R+GD V +R+AG++IP+V+ V L RPE T V P CP CGS + R+ GE Sbjct: 359 ELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEV 418 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC C AQ KE + HF SR MDV G+G+K+ QLV++ V ADLF LT Sbjct: 419 AIRCINP-SCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDW 477 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 L+RMG +SA N+V AL+ A++ + +YALGI VGE TA LA FG LEAL AS Sbjct: 478 LSLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDAS 537 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EEL V VG VVA V +FF +S ++ L GV P G Sbjct: 538 EEELASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVRME-----ERPTAGGPLEGMR 592 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V TG L M R +A+ ++ LG KV+ SVSK ++AGE GSKL++A+ LG+ + E Sbjct: 593 FVFTGELGSMRRKEAQDLVIRLGGKVSDSVSKGVTALVAGEGGGSKLSRARALGVPIWSE 652 Query: 663 AEMLRLL 669 L L+ Sbjct: 653 DRFLELV 659 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 281/668 (42%), Positives = 424/668 (63%), Gaps = 9/668 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+++ EL +R ++Y Y+V P + D EYD L EL LE HPELITPDSPTQR Sbjct: 28 EEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELITPDSPTQR 87 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G PL+ FSQ+ HE+PMLSL+N + +E AF +R++ L +K+++ E K+DG+++ Sbjct: 88 IGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPG-KKISFTVEPKIDGVSI 146 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S +Y+NG+ ATRG+GT G+DIT N++TIR++PL+L + P LEVRGE ++ F Sbjct: 147 SAVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEAYMSPKDF 206 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N + G +FANPRNA AGSL+QLDPR+ A+RPL YG G L G + T Sbjct: 207 ERLNAQREKEGKVLFANPRNATAGSLKQLDPRVVAERPLAVVFYGAGKLVGMKC-KTQEE 265 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK GLP+ +C + EV K+ E R L + DG +KVN LG Sbjct: 266 WLNFLKKIGLPIPIVFWVCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEWEYYSLLG 325 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A+APRWA A+K+ A+ T + +V FQVGR+G ITPVA ++PV ++G VS ATLHN Sbjct: 326 YTAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVSRATLHNF 385 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+++RL ++IGD V + +AG+VIP+VV V L++R +E+V P CP CG + Sbjct: 386 DQVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEKEIVPPEFCPSCGEKLSWE--G 443 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C AQ KE + HF R AMD+ G+G+ ++DQLV+K V AD++ L Sbjct: 444 IFLRCEN-ENCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDLDEET 502 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+RMG KSAQN++ A+E++K+ +R ++ LGI +G+ + LA YFGT++ L A Sbjct: 503 LVNLDRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIPHIGQKASEDLARYFGTMDKLSHA 562 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + EEL +P +G ++A + N+F +E+NR + +L +G+++ + + ++ +GK Sbjct: 563 TEEELLNLPFIGEIMARSIVNYFRKEANRRRLEKLRKKGLNFVSTL---SQASSGTLSGK 619 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V+TG+LS+ R+ +++ G +V+ S+S+KT ++ G GSKL +A++LGI +I+ Sbjct: 620 TFVITGTLSE-PRESIAQKIISKGGRVSNSLSRKTSYLVVGSDPGSKLQEAKKLGIPLIN 678 Query: 662 EAEMLRLL 669 E E+L +L Sbjct: 679 EQELLEML 686 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 298/668 (44%), Positives = 420/668 (62%), Gaps = 9/668 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++ EL L + Y Y+V D P +PD+EYD+L+ EL ++E +HPE T DSPT Sbjct: 1 MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG A+F+++ H+ PMLSL N F+E+ F++R+++++ N V + CELK+DGLA Sbjct: 61 RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGN---VEYMCELKIDGLA 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ Y +G V TRGDGTTGEDIT N++TI AIPLK+ P +EVRGE ++P+ Sbjct: 118 VSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKE---PLNVEVRGEAYMPRRS 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++NE+ + ++FANPRNAAAGSLRQLD ++TAKR L+ F Y V + Sbjct: 175 FLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNA-RSQS 233 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + K G + + + VL + K R +L +DIDG+VIKVN L QQ+++ Sbjct: 234 EALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEM 293 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF ++PRWA+A+KFPA+E +T + D+E +GRTG +TP A LEPV VAG VS A+LHN Sbjct: 294 GFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHN 353 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I +RIGD VV+++AGD+IP+VV + RPED PTHCP CG ++ R+EG Sbjct: 354 EDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEG 413 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ E L HFVSR+AM++DG+G KII QL + E + AD+F LT Sbjct: 414 EVALRCINP-KCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEE 472 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG K N++ A+++AK+ + L+ LGIR +G + LA + T++ L Sbjct: 473 DLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLT 532 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP-FA 599 + EL ++ D+G VA V + E R +I +L + V+ + ++ P F+ Sbjct: 533 VTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFS 592 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT+VLTG L QM+R++A L GAKV SV+K TD+VIAGE AGSKL KAQ LGIE+ Sbjct: 593 GKTIVLTGKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEI 652 Query: 660 IDEAEMLR 667 E + + Sbjct: 653 WTEQQFVD 660 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 338/672 (50%), Positives = 443/672 (65%), Gaps = 7/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++I Q+ TL+ H Y Y+V+D P + D+EYD+L R L ELE ++P+L+ PDSP + Sbjct: 23 DAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLVQPDSPINQ 82 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLA 120 VG PL AF+Q+ H++PMLSL NVF+ F +RV DRL + + ELKLDGLA Sbjct: 83 VGDMPLPAFTQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELKLDGLA 142 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ Y +G A TRGDG TGEDIT N +TIR +PL L LEVRGEV +P+AG Sbjct: 143 VSLKYVHGKFTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVLMPKAG 202 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N A K FANPRNAAAGSLRQLDP + A RPL F+ Y V + DT Sbjct: 203 FERLNRLAAEKEEKTFANPRNAAAGSLRQLDPSVAASRPLAFYAYSVNQ-GLLDTIDTQS 261 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L K G VS V + + E +Y + R L F+IDG+VIKVNSLA Q+QL Sbjct: 262 AALAWIKDIGFSVSA-VEVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSLALQQQL 320 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF++R PRWA A+KFPA+ MT + +++QVGRTG ITPV +LEPV V GV VSN TLHN Sbjct: 321 GFLSREPRWATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVSNVTLHN 380 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EI+RL +R GD V + RAGDVIP+V V +RPE++ V P+ CPVC S V + Sbjct: 381 FGEIQRLDVRAGDMVSVHRAGDVIPKVTRVWHEQRPENSEPVQLPSTCPVCDSPVVLPKD 440 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--T 478 EA+ARCTGGL C AQ++E+L HFVSRRAMD+DG+G + E V T AD+++L Sbjct: 441 EALARCTGGLFCPAQQQEALIHFVSRRAMDIDGLGASWLISFFEHGLVKTVADIYQLHNH 500 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L LE++G KS QN+++A+E +K TT +RF+YALGIR VGE TA LA FG L+AL Sbjct: 501 QEELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGIRGVGETTAQNLAQQFGDLDAL 560 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +ASIE+L PDVG + A + FF N VI+ L GVHW + +E + P Sbjct: 561 MSASIEKLLLTPDVGAITAELAYKFFRAPHNIEVITALREAGVHWDKVEQVVSEGL--PL 618 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 G+T V+TG+L M+RD+AKA+L LGAKV+GS+S KT ++AG+ AGSK+AKA++LG++ Sbjct: 619 DGQTWVITGALDSMARDEAKAKLQALGAKVSGSISAKTTALLAGDKAGSKMAKAEKLGVK 678 Query: 659 VIDEAEMLRLLG 670 V+ E E L L+G Sbjct: 679 VVGEEEFLALVG 690 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 325/675 (48%), Positives = 433/675 (64%), Gaps = 11/675 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S QQ+ LR ++RHHEYLY+V D PEI D +D LMR+L+ LE +HPELITPDSPTQRV Sbjct: 5 SAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P F+++ H PMLSLDNV EE + +RV+++ N ++ + CE KLDGL+++ Sbjct: 65 GGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEYKLDGLSMA 124 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPL-----KLHGENIPARLEVRGEVFLP 177 + Y +G L TRGDG GED+T+NVRTIR++PL KL +PA EVRGEV +P Sbjct: 125 LHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFEVRGEVVMP 184 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 FEK+NE+ G ANPRNAAAG++R L+P I A+R L F+ Y +G + Sbjct: 185 FTAFEKLNEEREAQGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYFALTEKGEDAFG 244 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L G V+ +S E V+ F ++ EE R LG++IDGVV+KVNS Q Sbjct: 245 EQEEALDALATLGFRVNQHRHAAKSIETVVEFVNRAEEHRSRLGYEIDGVVVKVNSAVLQ 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG+ RAPRWAVA+KF A+ +T V D++ QVGRTG +TPVA L PV V G V+ AT Sbjct: 305 RRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAPVQVGGTTVTRAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS-ERPEDTREVVFPTHCPVCGSDVE 416 LHNADEIERLGLRIGD V I R GDVIP+VV VV E P T+ FP CP CGS+V Sbjct: 365 LHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHFPHACPACGSEVV 424 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GEA RC C A+ +ESL HF SR M+++GMG+ I+ QL+ + V T +D++ Sbjct: 425 RTPGEADYRCVNT-DCPARLRESLLHFASRGVMNIEGMGEAIVMQLLGRGLVKTVSDIYS 483 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT +L LERMG KSA ++ ++K+++ R L+ LGIR VGE TA LA +G+++ Sbjct: 484 LTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGIRFVGERTAQALAEEYGSMD 543 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL AS EEL++V DVG V+ + FF E NR+++ L G+ + + S Sbjct: 544 ALMQASREELERVNDVGPRVSEAIREFFDEPRNRDLVERLREAGLRF----TGEKRKKTS 599 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AG T VLTG+L +SRD+AK ++ G V+GSVSKKT+ V+AG AGSKL KA LG Sbjct: 600 QLAGLTFVLTGTLPGLSRDEAKGKIENAGGHVSGSVSKKTNYVVAGADAGSKLEKANSLG 659 Query: 657 IEVIDEAEMLRLLGS 671 + VIDEA ++++L + Sbjct: 660 VPVIDEAALIKMLET 674 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats. Identities = 365/717 (50%), Positives = 475/717 (66%), Gaps = 47/717 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +++ + LR+TL+HH +LY+V+DAPE+PDAEYDRL +EL+ +E +P L T DSPTQ Sbjct: 31 LQTAAARAAWLRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAMYPALRTADSPTQ 90 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRLK---NNEKVTWCCELK 115 RV F +RH VPMLS+ D E+ +AF+ RV+ L+ + +++ ELK Sbjct: 91 RVLGQVRDGFVVVRHAVPMLSIRTETDTEASGAVAFDARVRRELELPDDAPPISYATELK 150 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-------------- 161 DGLA+++ YE+GVLV AATRGDG +GED+T N+RTI IPL+L Sbjct: 151 FDGLAINLRYEHGVLVQAATRGDGESGEDVTQNIRTIGQIPLRLRWAPTLGADAHSLPPE 210 Query: 162 ----------------ENIPARLEVRGEVFLPQAGFEKINEDARR------TGGKVFANP 199 + PA LEVRGEV++ + FE +NE R G K F NP Sbjct: 211 GARFALGRPGGETGAPDLAPAVLEVRGEVYMRRDDFEALNERQRERIARGDKGEKTFVNP 270 Query: 200 RNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTL 259 RNAAAG++RQLDP I A+RPL+FF YG+G ++G LP TH G L GLPV + Sbjct: 271 RNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVQGWALPHTHAGLLDALAAAGLPVCAERAV 330 Query: 260 CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 + A+ ++AF+ ++ R +L FDIDGVV KV+SLA Q++LGFV R PRWAVA K+PAQE Sbjct: 331 VQGADGLVAFHQRIGALRDSLAFDIDGVVYKVDSLALQQRLGFVTREPRWAVAHKYPAQE 390 Query: 320 QMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRR 379 QMT + +E QVGRTG +TPVARLEPV V G VSNATLHN DE R +R+GD V++RR Sbjct: 391 QMTRLLGIEIQVGRTGKLTPVARLEPVFVGGTTVSNATLHNEDEARRKDVRVGDTVIVRR 450 Query: 380 AGDVIPQVVNVVLSERPEDTREVV-----FPTHCPVCGSDVERVEGEAVARCTGGLICGA 434 AGDVIPQVV VVL +RP+D E CPVCGS + R EGEA RCTGGL C A Sbjct: 451 AGDVIPQVVGVVLEQRPDDVGEPFDLYQRLGGRCPVCGSAIARPEGEADWRCTGGLFCAA 510 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQ 494 QRK+++ HF SRR MD++G+GDK++DQLV+ + T +L+KL KLT LERMG KSA Sbjct: 511 QRKQAILHFASRRMMDIEGLGDKLVDQLVDAGVIRTLPELYKLGVAKLTALERMGEKSAV 570 Query: 495 NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 N+V ALEK+K+TT ARFL++LGIR+VGEATA LA +FG L+ + AS+++LQ VPDVG Sbjct: 571 NLVAALEKSKQTTLARFLFSLGIRQVGEATAKALARHFGALDRVMDASVDQLQAVPDVGP 630 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-PFAGKTVVLTGSLSQMS 613 +VA + FF + NR V+ +L A G+HW A + P AGKT+VLTG+L + Sbjct: 631 IVALSIRTFFDQPHNREVVEQLRAAGIHWAEHEASAAADAAELPLAGKTLVLTGTLPTLG 690 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 RD AK + G KV+GSVSKKT V+AG AGSKL KA+ELG+ ++DEA +L LL Sbjct: 691 RDAAKDLIEAAGGKVSGSVSKKTHFVVAGAEAGSKLDKARELGLVILDEAGLLALLN 747 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 853 bits (2204), Expect = 0.0, Method: Composition-based stats. Identities = 293/668 (43%), Positives = 427/668 (63%), Gaps = 8/668 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S++ ++ +L T+ +H Y+ D+PEI D EYD+LM+EL LE +HPEL DSPT RV Sbjct: 5 SVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PL F+QI H+ PMLSL N F E+ F+KRVQ+ + E V + E K+DGL+V Sbjct: 65 GGKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVG--ENVEYVVEFKIDGLSVG 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y NG ATRGDG GEDI+ N+ T+++IPLK+ N L VRGEV++ + F Sbjct: 123 LTYNNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKI---NDKKELIVRGEVYISKDNFR 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+NE +FANPRN AAGSLRQLDP++TAKRPL F + + +E +L ++H Sbjct: 180 KVNEQQEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDL-ESHSES 238 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L +K G VS +C+S +EV+ ++R L ++IDG+VIKVN++ Q++++G+ Sbjct: 239 LEYLEKLGFSVSQSYKVCKSIDEVIEHIEYWTDNRGNLDYEIDGMVIKVNNIKQRDEMGY 298 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A++PRWA+A+KFPA+++ T + D+ +VGRTG ITP A LEPV +AG VS ATLHN D Sbjct: 299 TAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATLHNED 358 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I ++I D V++++AGD+IPQV+ V+ ER D + P CPVC R+EGEA Sbjct: 359 YIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEA 418 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 +C + C AQ + + HFVSR AM++DG+G+ II L+ ++ + +DL+ + + Sbjct: 419 AVKCIN-MSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDV 477 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LERMG KSA N++N++EK+KE R + LGI+ +G A LA F L+ + +A+ Sbjct: 478 VDLERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISAT 537 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E+L+++ + G ++A+ V FF E+ N NVI++L GV+ + + E+++ F G Sbjct: 538 SEQLEELEEFGSIMANSVVEFFKEDKNMNVINKLKNVGVNTKS-LDNTGEKVEKIFEGMK 596 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 +VLTG+L + R+DAK + + G K SVSK T V+AGE AGSKL KA +LGI+VIDE Sbjct: 597 IVLTGTLPTLKRNDAKEMIEKRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIKVIDE 656 Query: 663 AEMLRLLG 670 L LL Sbjct: 657 ERFLELLK 664 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 853 bits (2204), Expect = 0.0, Method: Composition-based stats. Identities = 295/671 (43%), Positives = 426/671 (63%), Gaps = 12/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++++ +L E++ L + Y Y+V+D + DA YD L REL E+E HPE ITPDSPTQR Sbjct: 6 QNLQARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSPTQR 65 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L FS++ H M SL N F E F +RV +++ V++ CE K+DGLA+ Sbjct: 66 VGDQLLEGFSKVAHAESMYSLGNAFSPEEVTQFIERVTQQVEG--PVSFMCECKIDGLAI 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y++GV V ATRGDGT GEDIT N+RTIR++PL+L +EVRGE ++P+A F Sbjct: 124 ALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLRQN---LSVEVRGECYMPKAVF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE+ G ++F NPRNAAAG LRQLDPR A R L F Y + P++ G Sbjct: 181 LALNEEREAQGQEIFKNPRNAAAGGLRQLDPRAVADRQLNIFLYSAVYTDEFH-PESQAG 239 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 F++ GL + C++AEEV+ + + + R L ++IDGVVIKVN + QQ+ LG Sbjct: 240 LFAAFEQLGLRTNPLRRECQTAEEVIDYIQMIGQQRHDLPYEIDGVVIKVNHIDQQQALG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F +APRWA+A+KFPA+E +T +R+VE+ VGRTG +TP A ++PV +AG V A+LHN Sbjct: 300 FTVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPVPLAGTTVQRASLHNV 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D IE L +RIGD+V I +AGD+IP++ +V+L++RP+D++ + PTHCP C + + R E Sbjct: 360 DLIESLDVRIGDQVTIHKAGDIIPEITSVLLAKRPQDSQPLAIPTHCPECQTALVRQGEE 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC L+C AQR L HFVSR AM++ G+G +I++QLV + V DL++L+ Sbjct: 420 VALRCPN-LVCPAQRLALLSHFVSRGAMNIQGLGPRILNQLVASQAVTELDDLYRLSLED 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+++ KSAQ ++ A+E +K + R L+ LGIR VG A + FG L L A Sbjct: 479 LLSLDKIQEKSAQKLLAAIEASKSNSAERLLFGLGIRHVGAKAARLVLQVFGDLNRLSQA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW----PAPIVINAEEIDSP 597 + EE+ + VG +++ + + ES++ ++ L GV+ P P+ + E + Sbjct: 539 TAEEIGAIEGVGPIISQSLVQYLTLESSQAMLKRLAEAGVNLTYQGPQPLEVAQGETAND 598 Query: 598 F-AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 F GKTVVLTG++ SR +AK L GAKV GSVSKKTD ++AG+ AGSKL+KA+ LG Sbjct: 599 FWLGKTVVLTGTMESYSRSEAKELLEARGAKVTGSVSKKTDYLVAGQEAGSKLSKAESLG 658 Query: 657 IEVIDEAEMLR 667 + ++DEA L Sbjct: 659 VTILDEASFLA 669 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats. Identities = 337/721 (46%), Positives = 438/721 (60%), Gaps = 57/721 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L + H+ LY APEI DAEYDRL L LE P LITP+SP+Q Sbjct: 62 EDAKDEHDALAAEIARHDLLY-QDAAPEISDAEYDRLRLRLNALEAAFPSLITPESPSQT 120 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 VGA P F+++RH V MLSL NVF +E F RV+ LK +E + E+K+DGL Sbjct: 121 VGATPSEKFAKVRHTVRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKIDGL 180 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +VS+ YENG L AATRGDG+ GED+T+NVRTI IP + ++PA EVRGEV++ A Sbjct: 181 SVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYMSHA 240 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE----- 234 F+ +NE GG++FANPRNAAAGSLRQLDP ITA RPL FF +G G + G Sbjct: 241 DFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEASAL 300 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 DT+ G L WG P+ V +C S EE+LA Y +E R +LG+DIDGVV KVN L Sbjct: 301 PADTNFGVLQAIHGWGFPLPP-VEICRSVEEMLAVYRAIEMKRASLGYDIDGVVYKVNRL 359 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 QE+LGF++R PRWA A KF A++ T + ++ QVGRTGA+TPVA+L PV V GV+V Sbjct: 360 DLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGGVVVQ 419 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 NATLHN DEI R +RIGD V+++RAGDVIPQ++ VL +RP D E VFPT CPVCGS Sbjct: 420 NATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPVCGSH 479 Query: 415 VERV------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 R + +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K I ++ + Sbjct: 480 AVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFDEGRI 539 Query: 469 HTPADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 PAD+F + A KL+ E G +SA N+ A+E + + RF++ALGIR VGE Sbjct: 540 KAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGIRHVGE 599 Query: 523 ATAAGLAAYFGTLEALEAASIE--------------------------------ELQKVP 550 TA LA FG+L+AL AA E +L ++ Sbjct: 600 TTAKLLAKTFGSLDALRAAMAEPDAAELRPGDELLLESASGEDKRSLHRAIILAKLNEID 659 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G VVA + +FF E NR + L E +++ S AG TVV TG L Sbjct: 660 GIGDVVAQSIVDFFDEPHNREAVDALRRE----LTIEAYKPDQVSSLLAGATVVFTGKLE 715 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + +RD+AKA+ GAKVAGSVSK T ++AG AGSKL KA++LG++V+ E E L ++ Sbjct: 716 RFTRDEAKAQAERFGAKVAGSVSKATTYLVAGPGAGSKLKKAEDLGVKVMTEDEWLEMIS 775 Query: 671 S 671 S Sbjct: 776 S 776 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 852 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 307/667 (46%), Positives = 414/667 (62%), Gaps = 7/667 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ ELR L ++ Y+V+D P + D EYDRL REL+ +E ++P L T DSPT+RVGA Sbjct: 14 ERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTRRVGAP 73 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN-EKVTWCCELKLDGLAVSIL 124 +AFS RH V MLSLDN FD F + ++ + + + ELK+DG AV++ Sbjct: 74 VQSAFSPHRHLVRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKIDGAAVALT 133 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y GVLV+AATRGDGT GED+T+NVRTIR +PL+LHG+N P +EVRGEV+LP AGFE++ Sbjct: 134 YREGVLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLMEVRGEVYLPFAGFERM 193 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE G V+ NPRNAAAGS+RQLD TA RPL FF Y + +G + L Sbjct: 194 NEARVAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYAAVLPDGSAPARSQWELLE 253 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 Q WG+PV+ C + +E A+ VE E R TLGF IDG V+KVN +A Q++LG Sbjct: 254 QLSAWGVPVAPHRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDMALQDELGIR 313 Query: 304 A-RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A R PRW VA KF +T +R ++ VGRTG +TP A LEPV V G V+ A+LHNAD Sbjct: 314 ADRTPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATVTFASLHNAD 373 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 +I LR GD V + RAGDVIP V+ V +R + PT CP C + VER + Sbjct: 374 QIAAKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNTPVERYGDDV 433 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 C + C ++ E L HF S+ A+D+DG+ I QL++ VH ADLF +T +L Sbjct: 434 AVYCPN-VACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADLFDITVDQL 492 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 T LER KSA+N+V A+ AK+ +R ++ LGIR VG A L+ +G+L+AL A+ Sbjct: 493 TSLERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGSLDALMNAT 552 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E+L V +G ++A V ++FA+ + R ++ L A G+ + P NA + D G T Sbjct: 553 AEQLGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP---NAVQADGVLTGAT 609 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG+L +SR +A A + + G +V SVSKKT V+AGE AGSKL KA+ELG+ V+ E Sbjct: 610 VVLTGTLPSLSRGEATALVEQAGGRVTSSVSKKTTFVVAGEEAGSKLDKAKELGVTVLTE 669 Query: 663 AEMLRLL 669 AE+L L Sbjct: 670 AELLEKL 676 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 295/667 (44%), Positives = 417/667 (62%), Gaps = 7/667 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+ Q+ L + +H Y+ D PEI D EYD LM+EL +LE ++PE DSP+ R Sbjct: 4 EDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSPSNR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L F Q+ H+ PMLSL N + E F++RV++ + V + E K+DGL+V Sbjct: 64 VGGMALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVREM--TDGDVEYVVEFKIDGLSV 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 I YENG SAATRG+G GEDI+ NV TI++IPLK+ + + VRGEV++ + F Sbjct: 122 GITYENGEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDDKR---EIIVRGEVYISKENF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+NE ++FANPRN AAGSLRQLD ++TAKRPL F + + + + DTH Sbjct: 179 EKVNEYQEEHDLQIFANPRNLAAGSLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSD 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK G VS+ +C+S +EV+ F E+R +L FDIDG+V+KVN++ Q+ ++G Sbjct: 239 SLEYLKKLGFSVSENYKICKSIDEVIEFIEYWTENRGSLKFDIDGMVVKVNNIEQRNEMG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F A++PRWA+A+KFPA+ + + + D+E +VGRTG ITP A LEPV +AG VS ATLHN Sbjct: 299 FTAKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +++ D V++++AGD+IPQ+V VV +R D ++ V P+ CP CG R+EGE Sbjct: 359 DFIREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEGE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ + + HFVSR AMD+DGMG+ II +++ + +D++ L + Sbjct: 419 AAVKCIN-ISCPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LERMG KSA N++ A+EK+K R + LGIR VG A LA+ F +L+ + A Sbjct: 478 IVPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +E LQ++ + G +++ V FF EE N VI +L GV+ A +E I F G Sbjct: 538 DVERLQQLEEFGSIMSESVVKFFREEQNLAVIQKLKDAGVNTEA-GEDKSEGIPQLFEGM 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 +VLTG+L + R+ AK + G K SVSK T V+AGE AGSKL KA +LGI+VID Sbjct: 597 KIVLTGTLPTLKRNQAKEIIELRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIKVID 656 Query: 662 EAEMLRL 668 E L+L Sbjct: 657 EDMFLKL 663 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 290/687 (42%), Positives = 411/687 (59%), Gaps = 18/687 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++++ ELR L + Y+V+DAP++ D+ YDRL REL +LE HPEL+ DSPTQR Sbjct: 5 QGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-------VTWCCEL 114 VG +P F + H +P+ SLDN F E + R+ L + EL Sbjct: 65 VGGSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGEL 124 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG A+++ Y+NGVLV AATRGDG GEDIT+NVRTI +IPL+LH + PA +EVRGE Sbjct: 125 KIDGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGEA 184 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-- 232 +P F IN + +FANPRNA AG+LRQLDP++ A R L FF Y + + E Sbjct: 185 LIPDNTFAAINSERAARDEPLFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPEDWS 244 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 GE P + L + G V+ L + V F+ + R L + DGVV+K+N Sbjct: 245 GERPTSQWESLRWLEDAGFRVNPNAALLPDVDSVEQFFGDWDSRRHDLNYATDGVVVKLN 304 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L Q+ GF +APRWA+A K+PA+E + + + QVGRTG +TPVA EPV +AG Sbjct: 305 DLRLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLAGTS 364 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS ATLHNAD ++ L L GD +++R+AG++IP+V+ V+ RPE + P CP CG Sbjct: 365 VSRATLHNADRLQELDLHSGDTIIVRKAGEIIPEVLRVLPELRPEGALPLELPQQCPSCG 424 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 SD+ R GEA RC C A +L+H+VS+ A+DVDG+G K+I+QLVE+ V + A Sbjct: 425 SDLVRESGEAATRCVNS-SCPAILSGALRHWVSKGALDVDGLGSKLIEQLVERGLVRSIA 483 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL++L LT LERMG KSA N+V AL +++ ++R LY LGI VGE A LA+ F Sbjct: 484 DLYRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGIHHVGEVNAKALASAF 543 Query: 533 GTLEALEAASI---EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW-----P 584 +L A++ E + + +G +A + +F +N++++ +L A G+ Sbjct: 544 ADAHSLADAAVQRPEAITDLHGIGPEIAQSLQQWFNTSANQDLLQQLRAVGLTLAASDQE 603 Query: 585 APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 + + G+T VLTG+L +SR A+A + G KV+GSVSKKT V+AG+ Sbjct: 604 RQALADRNNGKGHLNGQTFVLTGTLPSLSRSQAQALIEGAGGKVSGSVSKKTSFVVAGDE 663 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLLGS 671 AGSKL KA LG+ V+DEA ++ L+ + Sbjct: 664 AGSKLDKANTLGVSVLDEAALMLLIQN 690 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 293/673 (43%), Positives = 411/673 (61%), Gaps = 15/673 (2%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ LR + H LY+V D PEI DA+YD L+R L+ELE HPEL+TPDSPTQRVGA P Sbjct: 10 EVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVGAEP 69 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 L AF + H P+LSL N F + A+ +RV+ L N CE K+DGLAV++ Y Sbjct: 70 LKAFGIVNHPYPLLSLANAFSDTELEAWYQRVKKLLGNIP-FQIDCEPKMDGLAVALTYR 128 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 NG + ATRGDG GE+IT N+RTI +IPL N P EVRGEV+L + GF K+N Sbjct: 129 NGKFATGATRGDGFQGENITRNLRTIHSIPLN-AEPNAPPVFEVRGEVYLSKNGFAKLNR 187 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + G +FANPRNAAAGSLRQLDP +TA+RPL F Y +G E LPD+H L F Sbjct: 188 ERADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPDSHWQILDYF 247 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 K G ++ L + EE +Y ++ +R +L ++ DGVV KV+S++ Q +LG V R Sbjct: 248 SKIGFRINPLNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFKVDSVSLQHRLGDVGRE 307 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWA+A+KFPA++ MT ++ + VGRTG + P A LEPV+V GV+V A LHN D+I R Sbjct: 308 PRWAIAYKFPAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAALHNEDDILR 367 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF----------PTHCPVCGSDVE 416 +R GD V+I+RAG+VIP+VV VLS+R +++ T CPVCG ++ Sbjct: 368 KDIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTACPVCGGEIY 427 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GEA+ C + C AQ + L+HFVSR AMD+ G+G+ + L ++ V +DL+ Sbjct: 428 RPAGEAMHYCAN-VSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGLVKNVSDLYY 486 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT L L RMG KSA N+++A+ +K R ++ LG+R VG TA L+ ++G + Sbjct: 487 LTTADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGVRHVGNETATLLSRHYGNIW 546 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL + ELQ +PD+G +AS + +F+EE N VI L GV + + Sbjct: 547 ALAKTGLGELQTIPDIGDKIASSIVAYFSEEKNVAVIRRLEEAGVRLTSD--QKPVNKNM 604 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 PF+G V+TG L SR++A+ ++ LG +V+K T+ ++ G AGSKL KA+ +G Sbjct: 605 PFSGMEFVVTGKLESFSREEAQEKIRSLGGTAKDNVTKATNYLVVGADAGSKLTKARSMG 664 Query: 657 IEVIDEAEMLRLL 669 ++ + E E + +L Sbjct: 665 VKELSEREFINML 677 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 848 bits (2191), Expect = 0.0, Method: Composition-based stats. Identities = 346/695 (49%), Positives = 448/695 (64%), Gaps = 31/695 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E ++L L + H+ LY+ DAP I DAEYD L R +E ++PEL+ DSP+ Sbjct: 22 LEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSPSH 81 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDG 118 RVGA P F ++ H+VPMLSL N FD+E F R++ L K + + E K+DG Sbjct: 82 RVGAQPADGFGKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKIDG 141 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+ ++ YE G V ATRGDG GE++T N++TI IP +L G+NIP +EVRGEV++ Sbjct: 142 LSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYMSH 201 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-D 237 F +NE R G VFANPRNAAAGSLRQLD +ITA RPL FF Y G E +LP D Sbjct: 202 EDFAALNERQREAGKPVFANPRNAAAGSLRQLDAKITASRPLRFFAYTWG--EMSDLPAD 259 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T G + F+KWG V+ C++ E ++ FYH +EE R TLG+DIDGVV KV+ L Q Sbjct: 260 TQSGVMDAFRKWGFTVNPLFGRCDTVEALIDFYHDIEERRATLGYDIDGVVYKVDRLDWQ 319 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LGFV+R+PRWA+A KFPA++ MT + +E QVGRTGA+TPVARL PV V GV+VSNAT Sbjct: 320 NRLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVVVSNAT 379 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNADEIERLG+R GD VV++RAGDVIPQ+V VV +RP ++ VFP CP CGS R Sbjct: 380 LHNADEIERLGVRPGDTVVVQRAGDVIPQIVRVV-EDRPRGKKKFVFPDTCPECGSHAVR 438 Query: 418 VEG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 +AVARCTGGL+C AQ E L+HFVSR A D++G+G+K I E + P Sbjct: 439 EVNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGLIKKP 498 Query: 472 ADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 D+F L A KL E G SA+ + +A++ +E RF++ LGIR VGE A Sbjct: 499 DDIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVGETNA 558 Query: 526 AGLAAYFGTLEALE-----AASIE-----ELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 LA +GTL+ E AA E EL + VG V+A + +FFAE+ NR V+ Sbjct: 559 RLLARSYGTLDHFEEQMRAAADREDEAYAELLSIDGVGEVLAESIVDFFAEKHNREVLDG 618 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L GV + + +E SP AGKTVV TGSL +M+R +AKAR +LGAKVAGSVS K Sbjct: 619 LREAGV---KGVPLPKQETSSPVAGKTVVFTGSLEKMTRSEAKARAEQLGAKVAGSVSAK 675 Query: 636 TDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 TD+++AG AGSKLAKA+ELGIE++DE + + L G Sbjct: 676 TDILVAGADAGSKLAKARELGIEILDEDQWIELAG 710 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 327/671 (48%), Positives = 433/671 (64%), Gaps = 11/671 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ LR+ LR H Y Y+++DAP I DAEYDRL+REL LE + E + DSPT+ V Sbjct: 6 TLTARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTRTV 65 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P F+ H +LSL N F AF +R+ + L +++ E K+DGLAV+ Sbjct: 66 GAPPSQVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPAT-TLSFIVEPKVDGLAVN 124 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVFLPQA 179 + YE G L AATRGDGTTGED+T NVRTI IP +L G +P LEVRGE+++ + Sbjct: 125 LRYEQGSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSRE 184 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F +N G + FANPRNAAAGSLRQLD R+TA R L FF YG G L G + + Sbjct: 185 AFAALNARQDAEGAQPFANPRNAAAGSLRQLDARVTASRRLGFFAYGAG-LGGRAIASSQ 243 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + +G V + + E +LA Y ++++ RP + ++IDGVV K++ A Q++ Sbjct: 244 SQLLERLAGFGFAV-QKTACADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQDR 302 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 +G VAR+PRWA+A KFPA+E T V+D+ +QVGRTG ITPVA +EPV V GV+VS ATLH Sbjct: 303 MGAVARSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATLH 362 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DE++R + G +V++RRAGDVIP+VV V P CPVCG+ + R+E Sbjct: 363 NIDELKRKQVYAGARVIVRRAGDVIPEVVRAVDV--DAQAMMPKAPAQCPVCGASLFRLE 420 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GE RC+GGL C AQ E L+HFVSR AMD++GMGDK+I +LV++ ++ ADL++ Sbjct: 421 GEVAIRCSGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYEFDY 480 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L + MG K N+ ++E++K+ ARFL+ALGIR VG ATAA LA +F LE L Sbjct: 481 ASLHEWQGMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAALATHFADLELLM 540 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E L VPDVG VA + +FF E+ NR+VI LLA GV AP ++ D P A Sbjct: 541 QADEEALLAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGVTPEAP---QQQQHDHPLA 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTGS + R A+ +L LG + +GSVSK+TDLVIAGE AGSKL KA+ELGIEV Sbjct: 598 GKTVVLTGSFVAIKRRTAQEQLRALGVRPSGSVSKQTDLVIAGEKAGSKLTKARELGIEV 657 Query: 660 IDEAEMLRLLG 670 DEA++L L Sbjct: 658 ADEAQLLSWLN 668 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 295/670 (44%), Positives = 404/670 (60%), Gaps = 14/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +Q++ ELR +R+H Y Y+V+D PEI DAEYDRL++ELR LE HPELI PDSPTQ Sbjct: 1 MQTPKQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQ 60 Query: 61 RVGAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG+A L F+ + H M SL N F ++ F + L E + E K+DGL Sbjct: 61 TVGSAILETPFTPVPHPTRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDGL 120 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +V+++YE GV TRGDG TGED+T N+ I IP +L P LEVRGE++LP Sbjct: 121 SVNLIYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQ---PLDLEVRGEIYLPIQ 177 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G F NPRNAAAGSLRQ DPRI+A R L YGVG E + T Sbjct: 178 TFLELNTQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPESLGV-GTQ 236 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + + G V + E + Y + R +L F+ DGV +K+N+L+ + Sbjct: 237 QELLEKLGQLGFSVDPHYQVVRGVEGIEQGYQAMLAARKSLPFEADGVTVKLNNLSLWSE 296 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG+ A+ PR+A+A+KFPA+E+ T V V FQVGRTG +TPVA LEPV + G VS TLH Sbjct: 297 LGYTAKTPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLH 356 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N ++ LGLRIGD V++ ++G VIP+V+ VV P V +PTHCP CG+ +E Sbjct: 357 NESYVQELGLRIGDTVLVHKSGGVIPEVLRVVTEA-PRGHAPVEWPTHCPECGTALEL-- 413 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 + C L C A+ E+++HF SRRAMD+ G+G+K+I+QL+E V ADL+ L Sbjct: 414 SGKIHLCPNPL-CPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAADLYNLKK 472 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LER KSAQN++ +E +K R L+ALGI +VGE+TA LA FG L+++ Sbjct: 473 EDIAALERKAEKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDSIL 532 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A++EEL VPD+ A +H A ++ I L A G+ + A ++ Sbjct: 533 KATVEELDAVPDIAETTAQAIHQALARPEMQSFIERLRAAGLVFEA----REKQQSQALE 588 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T VLTG LS+ R++ +L GAK++GSVS+KT VIAG AGSKL+KA+ELGI + Sbjct: 589 GLTFVLTGELSR-PREEVARQLEAHGAKISGSVSRKTSYVIAGPGAGSKLSKAKELGIPI 647 Query: 660 IDEAEMLRLL 669 +DEA + LL Sbjct: 648 LDEAGLRALL 657 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 305/671 (45%), Positives = 426/671 (63%), Gaps = 13/671 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +++ EL+ + H++ YHV+D P I D EYD+L EL ++E L DSP+QRVG Sbjct: 21 KKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNPKGLDLSDSPSQRVGG 80 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L F++ +H +PMLSL N + E F++RV+ L + V + CELK DGL++ ++ Sbjct: 81 TVLEGFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDPVEYLCELKFDGLSMELI 140 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG LV A TRGDGT GED+T N++TI++IPLKL +N P LEVRGEV + + F ++ Sbjct: 141 YENGQLVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPLLEVRGEVLMFKEDFARL 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE + G + FANPRNAAAG++RQLD RI A RPL FF Y +G +EG E +T Sbjct: 201 NETQQENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYALGAVEG-ETFNTQKNIQE 259 Query: 245 QFKKWGLPVS-----DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 F G+P D + + + EEV+ +YH +E+ RP L FDIDGVVIKVNSL QE Sbjct: 260 YFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPFDIDGVVIKVNSLRLQED 319 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG VAR+PRWA A KF ++ T V D+ QVGRTGA+TPVA ++PV V GV V+NATLH Sbjct: 320 LGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAIMKPVKVGGVTVTNATLH 379 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERV 418 N DEI R +RIGD V+I+RAGDVIP+VV VV +RP D P CP C S + Sbjct: 380 NQDEITRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLPYSIPERCPACDSVAVKA 439 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGE V RC L C A KESLKHFV+RRAM++D +GD++I+ LV+ + + +D ++LT Sbjct: 440 EGEVVTRCVNPL-CIAVVKESLKHFVARRAMNIDKVGDRLIETLVDNKLLTRFSDFYRLT 498 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 ++ LER G KSA N++ ++E +K T ARF++ALGIR VGE T LA +F T++ Sbjct: 499 KEQILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQTGKHLADHFLTIDKF 558 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 AS EEL +VP++G VA + ++ + + ++ GV P+ + Sbjct: 559 LEASEEELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELGVKIAGPV----RAQEGSL 614 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +G + ++TG+L + RDDAK + G K+ GSVS K + ++ G+ GSK+ KAQ LG++ Sbjct: 615 SGMSFLITGTLP-VKRDDAKDLIERNGGKILGSVSSKLNYLVVGDDPGSKVEKAQGLGVK 673 Query: 659 VIDEAEMLRLL 669 +I E+ ++ Sbjct: 674 IISWEELQAMI 684 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 842 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 317/677 (46%), Positives = 423/677 (62%), Gaps = 10/677 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + I+++ LR L H YHV D P I D EYDR+M+ L +ET+ PEL TPDSPT+ Sbjct: 8 FDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELSTPDSPTR 67 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+GA L AF H +PM SLDN F ++ + F+ R L ++ + + E KLDG+A Sbjct: 68 RIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTAKILNTSD-IRYTVEPKLDGVA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 V + YE G L A TRGDGT GE IT N RTI ++PLKL IP LEVRGEV + Sbjct: 127 VELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLAPAGNGTIPDVLEVRGEVIIN 186 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE---GGE 234 FE +N+ TG +FANPRNAAAGSLRQLD R+TAKRPL F YGVG + Sbjct: 187 SKDFEGLNKKRLATGEPLFANPRNAAAGSLRQLDSRVTAKRPLEIFVYGVGRAQELMANF 246 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 +H L K+ G ++ + S EVL + E R L ++IDG+VIKV+ + Sbjct: 247 DIGSHSALLESLKRLGFRINPLIRSGLSLTEVLDRFKAFETMRQDLDYEIDGMVIKVDDI 306 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 QE+LG AR+PRWA+A+KFPA E+ T + D+ QVGRTG +TPVA LEPV++ GV+V+ Sbjct: 307 VFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPVNIGGVMVA 366 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 A+LHN DEI+ +RI D V+++RAGDVIP+VV V + R R V PTHCPVC S Sbjct: 367 RASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPTHCPVCHSP 426 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 V R++ EA +C C AQ K+ LKHFVS+ D++G+G K+IDQLV++ V + ADL Sbjct: 427 VRRLDNEAAVKCINA-SCKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDRTLVGSFADL 485 Query: 475 FKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 F L L ++RMG KSA N+V A+E++K RFL+ALG+ GE+ A L++ F T Sbjct: 486 FTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAAQLLSSTFFT 545 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 LEAL AS E L + VG A V FFA N+ I+ ++ GV V+ + + Sbjct: 546 LEALLKASAEALGAIEGVGPKTADSVVAFFANPDNQETIARMMENGVVIENHTVVESAAL 605 Query: 595 DSP--FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 D+ F+ K VVLTG+L ++R +AK RL E GA+V SVSK TD+++AGEA+GSKL KA Sbjct: 606 DNATFFSEKRVVLTGTLGTLTRSEAKQRLEEQGARVVSSVSKNTDILVAGEASGSKLVKA 665 Query: 653 QELGIEVIDEAEMLRLL 669 + LG+ ++DE L L Sbjct: 666 RSLGVTIMDEQTFLEHL 682 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 842 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 320/678 (47%), Positives = 423/678 (62%), Gaps = 10/678 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q+ +LR L H LY+ +D PEI DAEYD L REL LET+ P L SPTQR Sbjct: 37 EEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQR 96 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L + H + M SLDN F + + AF +R+ + L + + C+ K+DGLA+ Sbjct: 97 VGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALP-DAPSAFWCDPKMDGLAL 155 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YENGV SA TRG+G GE +T+ +RT+R +PL L G+++P R+EVRGEV + +A F Sbjct: 156 EVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADF 215 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG--VLEGGELPDT- 238 E++N GGK+FANPRNAAAGS+RQLD +TA RPL F YGVG VLEGG P T Sbjct: 216 EQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTT 275 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H G + + ++WG LC S +EV A+Y + R +L +IDGVV K++ QE Sbjct: 276 HSGLMARLREWGFDTPPEGRLCASPDEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQE 335 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LGF ARAPRWA+A KFPA + T + D+ QVGRTG +TPVA LEPV V GV VS ATL Sbjct: 336 ALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATL 395 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI GL +GD V+++RAGDVIP+VV ++ ER D R VFP +CP C S V R Sbjct: 396 HNEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDSPVVRP 455 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 +GE RC + C A R++S+ HFVS+ +DV G+G++ + QLV+ +V +P LF LT Sbjct: 456 QGEVAHRCVNVM-CPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDGGHVTSPVGLFLLT 514 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKET-TFARFLYALGIREVGEATAAGLAAYFGTLEA 537 L ERMGP SA N V AL+ A+ T R + ALGIR VGE TA LAA F L+A Sbjct: 515 KLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQTARTLAANFTDLDA 574 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV----HWPAPIVINAEE 593 L A E LQ++PD+G VA + +FFA E N ++ L A G+ P A+ Sbjct: 575 LREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGLWPKRQDAPPASEGADA 634 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I P G V+ TGSL+++ R +A+ GA +A SV+K DL++ G GSKL KA+ Sbjct: 635 IVLPLQGLKVLFTGSLTRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKAR 694 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LGI V++EA+ +L S Sbjct: 695 KLGIRVMEEADFFAMLAS 712 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 312/689 (45%), Positives = 420/689 (60%), Gaps = 25/689 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + ++ LR + H+ +LY+ DAP I DA +D LMRELR+LE +HPE P SPTQR Sbjct: 13 DDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYDPTSPTQR 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F+ + H M SLDN D + A+ R + L + V CCELK+DG + Sbjct: 73 VGGYVGEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTD--VPLCCELKIDGSGI 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR------LEVRGEVF 175 ++ YE+G L+ AATRGDG GED+T+N+RT+R +PL+L E + A LE+RGEV+ Sbjct: 131 AVTYEDGRLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALELRGEVY 190 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 +P+ F +N A R G + FANPRNAAAGSLRQ DP ITA+R L+ F Y L Sbjct: 191 MPKKSFNALNAAADREGRQEFANPRNAAAGSLRQKDPTITAQRDLSTFTYATASNAALTL 250 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 P L + G V+ V LC S +EV AF + + R +L ++IDGVV+KVN + Sbjct: 251 PG-QWELLEWMRNAGFHVNPDVRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVKVNDFS 309 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q++LGF ARAPRWA+AFKFP +E+ T +RD+ QVGRTGA+TPVA LEPV V+G +VS Sbjct: 310 LQDRLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSGSVVSR 369 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHN DE+ R +R+GD V++R+AGDVIP+V+ VLS RP D + PT CP CGS V Sbjct: 370 ATLHNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPSCGSPV 429 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 R EG A+ RC L C AQ E L H+ SR A+D++GMG+++I +L+E V AD + Sbjct: 430 VREEGGAILRCV-SLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDVADYY 488 Query: 476 KLTAGKLTGLE-----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 LT L L+ +G A +V ++++K FAR L+ LGIR VG+ T Sbjct: 489 HLTEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGIRHVGKTT 548 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A +A + ++EAL A +++L + +G ++A + F N VI LLA GV Sbjct: 549 AEAIAQAYPSIEALREAKMDDLAAIEGIGPIIAESLFVFLRTPQNVQVIDRLLAAGVVME 608 Query: 585 APIVINAEEIDSPFAGKTVVLTGSL--SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG 642 + +G T VLTGSL S M+R +A L +GAKV+GSVS KT VIAG Sbjct: 609 EAAL--TPRAPQTLSGLTFVLTGSLVQSGMTRTEAGDALKAMGAKVSGSVSGKTSFVIAG 666 Query: 643 EAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 EAAGSK KA LG+ VIDEA L +L + Sbjct: 667 EAAGSKRDKAVSLGVPVIDEAAFLHILET 695 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 281/666 (42%), Positives = 394/666 (59%), Gaps = 6/666 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + L L H LY+V+DAPEI D EYD LMRE+ + E +HP+LI DSP++RVG A Sbjct: 10 DRYYWLVDELNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKRVGGA 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 L AF ++ H PMLSL++VF + + +R + + + WCCELK+DGLAVS+++ Sbjct: 70 VLDAFEKVTHAKPMLSLEDVFSKNELHDWLQRAAEGV-GQPWIPWCCELKIDGLAVSLIF 128 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 E+G V A+TRGDG GED+T N++T++ +PL+L G ++P LE+RGEV++ + GF ++N Sbjct: 129 EDGKFVQASTRGDGVVGEDVTENLKTVKDLPLRLLG-DVPGHLELRGEVYMGKDGFAQLN 187 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 G +FANPRNAAAGSLRQLD + AKR L F Y V E L + L Sbjct: 188 AAREEAGLPLFANPRNAAAGSLRQLDTSVAAKRNLRLFTYYVQDAESYGL-HSQSEILEW 246 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K GLPV E+ E L F + +R +L + DG V K ++ LG + Sbjct: 247 LKARGLPVQKAWRRAETETEALDFLERWSGERFSLPYATDGAVFKADATEYWTVLGNNVK 306 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 PRWAVA+K+P +E+ T + +E +GRTG +TPVA LEPV ++G +V A+LHN +EI+ Sbjct: 307 TPRWAVAYKYPPEERKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEEIQ 366 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R+GD+V +R+AG++IP++V V ++ R P CPVCG+ V ++ GE R Sbjct: 367 RKDIRVGDRVWVRKAGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVALR 426 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C AQ + L HF SR+ M++ G+GD++ +QLV V +DL+ L L L Sbjct: 427 CLN-RSCPAQLTQGLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVRL 485 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 +RMG KSA ++ A+ K+KE + ALGIREVG AA LA F +L+ + AA E Sbjct: 486 DRMGEKSAGKLLQAIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSLDEIAAADEER 545 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L V VG V+A + FF EE NR +I L GV + A P AGKT V Sbjct: 546 LAAVEGVGPVIAGSIKTFFGEEHNRRLIDGLREAGVSMRSETAPEAPI--GPLAGKTFVF 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG LS+MSR A+ + + G K SVSKKT V+ GEA G K KA L + ++E E Sbjct: 604 TGELSRMSRAQAQELVTQRGGKSVNSVSKKTSYVVVGEAPGGKAEKALRLNVPTLNEEEF 663 Query: 666 LRLLGS 671 ++ + Sbjct: 664 FAMIDN 669 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 278/664 (41%), Positives = 400/664 (60%), Gaps = 4/664 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q EL + H Y+V P I D E+D LM +L ++E +HPE I+ SPTQRVG Sbjct: 8 QSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASPTQRVGEM 67 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 F + H PMLSL N + ++ F RV+ L ++ V + CELK+DG+A+S + Sbjct: 68 LTEGFQTVAHRTPMLSLANSYSKDEVQDFIHRVKK-LTRSQDVAFSCELKMDGIAISAQF 126 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 E G+ V TRGDG G+DIT N+RT+ A PL+L G + P LEVRGE+F+P+ F+K+N Sbjct: 127 EKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEIFMPKQVFQKLN 186 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + G ++ANPRNAAAGSL+ LDP T +R L YG+G + + + Sbjct: 187 AEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQ-DSQDALTSQFACHAL 245 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K +GLP+ +V C + EE+ F KV R +L F+IDGVV+K++SLA+Q++LG + Sbjct: 246 LKSYGLPILHQVEKCHTLEEIWEFVEKVRTLRASLPFEIDGVVVKLDSLAEQKRLGSTGK 305 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 PRWAVA+KF A++ T + + QVGRTG +TPVA L+PV +AG ++ ATLHN +E+ Sbjct: 306 NPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLHNEEEVL 365 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R GD V+I + GDVIP+VV+V +R D+ PTHCP CG+ V R E + Sbjct: 366 RKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPSCGALVARSVDEVAVK 425 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C L C Q+ L +F + AMD++ MG+K+++QLV +V P+D++ LT+ +L L Sbjct: 426 CPNTLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKRPSDIYALTSEQLFQL 485 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 E KS +N++ ++EK+K+ +F+RF+ ALGI+ VGE TA LA G + L + EE Sbjct: 486 EGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAKRAGNVHILMQMTTEE 545 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L ++ +G VA+ + +FA+ N+ I LL GV I+ PF KT VL Sbjct: 546 LLQIEGIGEKVATAIVEYFADARNQEEIQLLLQRGVLPQEVKSIS--HKGHPFDAKTFVL 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L Q +R A + E G KV SVS KTD ++AGE GSKL KA+ L + ++ E E Sbjct: 604 TGTLKQYTRPAAATLIKERGGKVTNSVSSKTDYLLAGEDPGSKLDKAKSLQVRILTEEEF 663 Query: 666 LRLL 669 +L Sbjct: 664 QAML 667 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 328/699 (46%), Positives = 432/699 (61%), Gaps = 37/699 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L + H+ Y+ DAP + DAEYD L +E + P L DS +++V Sbjct: 28 EAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDSLSEKV 87 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGLA 120 GAAP F ++ H+VPMLSL N F +E + F RV+ L +++V + CE K+DGL+ Sbjct: 88 GAAPSEKFGKVAHKVPMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPKIDGLS 147 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YENG L AATRGDG+ GED+T NVRTI IP +L G+ +P ++VRGEV++ +A Sbjct: 148 CSLHYENGRLTVAATRGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVYMAKAD 207 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTH 239 FE +N KVFANPRNAAAGSLRQLD ITA RPL FF Y G E +LP +T Sbjct: 208 FEALNARQAAAEEKVFANPRNAAAGSLRQLDSSITASRPLKFFAYAWG--EASDLPAETQ 265 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 G + F +WG + + + + A ++A Y +E R LG+DIDGVV KVNSL Q + Sbjct: 266 FGVVEAFARWGFTTNPLMVVAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLELQRR 325 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LGFV+R+PRWA+A KFPA++ T + D+E QVGRTGA+TPVA+L PV V GV+VS+ATLH Sbjct: 326 LGFVSRSPRWAIAHKFPAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSSATLH 385 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI R +RIGD VV++RAGDVIPQVV V+ +RP ++ FPTHCP CGS R Sbjct: 386 NEDEIARKDVRIGDTVVVQRAGDVIPQVVRVIEEKRPAGSKPYEFPTHCPACGSHAVREV 445 Query: 420 G------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K + E + +PAD Sbjct: 446 DTKSGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWGLIASPAD 505 Query: 474 LFKL------TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 +F L + +L + G SA N+ A+ + + RF++ALGIR VGE A Sbjct: 506 IFTLETRNARSLQRLENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGIRHVGETNAKR 565 Query: 528 LAAYFGTLEALE----------------AASIEELQKVPDVGIVVASHVHNFFAEESNRN 571 L ++GT+EALE + +E+ + +G VVA V FF E NR Sbjct: 566 LMRHYGTVEALEAGALAAVIPGEEHPKGNEAWQEMIGIDGIGDVVAEAVIEFFGEPRNRE 625 Query: 572 VISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGS 631 V++ LL E P + SP +GKTVV TGSL +M+RD+AKA LGAKVAGS Sbjct: 626 VVTALLKE----VTPEPMEQVAAASPVSGKTVVFTGSLEKMTRDEAKAMAERLGAKVAGS 681 Query: 632 VSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 VS KT+LV+AG AGSKL KAQ LG++VI E E L+G Sbjct: 682 VSAKTNLVVAGPGAGSKLEKAQALGVQVITEDEWFELVG 720 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 300/658 (45%), Positives = 399/658 (60%), Gaps = 9/658 (1%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 LRHH Y Y+V+DAP + DAEYDRL ++L+ LE ++P L TPDSPT +VG + Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVT 91 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H PMLSL V++E+ F + ++ L E VT+ E K DGLAV ++YE+G LV A Sbjct: 92 HPAPMLSLKAVYEEDEVRNFAETCREELGR-ETVTYIAEPKFDGLAVELIYEDGRLVQGA 150 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEVFLPQAGFEKINEDARRTG 192 TRGDG TGE+IT+NV+TI+ +PL+L + +P RL VRGE ++ + F N G Sbjct: 151 TRGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRREEEG 210 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLP 252 KVFANPRNAAAGSLRQLD ITA+RPL + Y + ++G + TH L +WGL Sbjct: 211 KKVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDGRDFA-THAEVLEALPEWGLR 269 Query: 253 VS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 V D + C+ + LA + + + R L ++IDG+VIKVN E LG R PRWA Sbjct: 270 VCEDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPRWAA 329 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A+KFP + T + D+ QVGRTG ITPVA L PV V GV V+ A+LHN +EI+R +RI Sbjct: 330 AYKFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRI 389 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 GD V+I RAGDVIPQVV V+ ER P CPVCGS+V + + A CTGG+ Sbjct: 390 GDTVLIERAGDVIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTGGMT 449 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQ +E LKH+ SR A D++G+GDK +QL++ + T +DL++L L LER K Sbjct: 450 CPAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERYADK 509 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 SAQN+++ +E + E RFLYALGI VG ATA LA +F TL+AL A + L + D Sbjct: 510 SAQNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHFDTLDALVDADEDALTTIDD 569 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G VA + FFA+++NR VI E+ G+ P +A + G T V TGSL Sbjct: 570 IGPEVAHSIATFFADDANRGVIDEMRDAGLTLTNPYAEDA----ARLEGLTFVFTGSLEG 625 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +R + + + GA SVS TD V+AG AGSK A + GI V+DE LL Sbjct: 626 WTRSAVQRFVEQHGANATSSVSGNTDYVVAGPGAGSKRDDADDRGIPVLDEDAFHALL 683 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 333/722 (46%), Positives = 432/722 (59%), Gaps = 58/722 (8%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L + H+ Y+ DAP I DA+YDRL R ++E + P L DS +++V Sbjct: 22 EASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDSLSRKV 81 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT--WCCELKLDGLA 120 GAAP A F+++ H+VPMLSL N F +E F RV+ L E + E K+DGL+ Sbjct: 82 GAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPKIDGLS 141 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YE GVLV AATRGDGT GED+T+NVRTI IP +L G +P +++RGEV++ +A Sbjct: 142 CSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVYMGKAD 201 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F +N G VFANPRNAAAGSLRQLDP IT RPL FF Y G E G + Sbjct: 202 FLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRPLRFFAYAWGQAEPGPPGASQH 261 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + F+++GLP + A +LA Y K+ +R +LG+DIDGVV KV+SLA QE+L Sbjct: 262 EVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAERASLGYDIDGVVYKVDSLALQERL 321 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+R+PRWA+A KF A++ T + +E QVGRTGA+TPVA+L PV V GV+VSNATLHN Sbjct: 322 GFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVVSNATLHN 381 Query: 361 ADEIER-----------LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 D I + +R+GD VV++RAGDVIPQVV+VVL +RP FP HCP Sbjct: 382 EDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAYQFPHHCP 441 Query: 410 VCGSDVERV------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV 463 VC S R + +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K Sbjct: 442 VCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEKQAHAFY 501 Query: 464 EKEYVHTPADLFKLTA------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGI 517 E + + PAD+F+L A KL E G SAQN+ A+E + RF++ALGI Sbjct: 502 EWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIEARRTIALDRFIFALGI 561 Query: 518 REVGEATAAGLAAYFGTLEALEAASI-----------------------------EELQK 548 R VGE A LA ++G++EAL A+I +E+ Sbjct: 562 RHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASEETPPTRRRKPQGNEVWQEMTD 621 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGS 608 + +G VVA V FF E NR V+ ELL E P + A SP +GKTVV TGS Sbjct: 622 IDGIGAVVAEAVVEFFREPHNRQVVEELLKE----VTPQPLEAVASTSPVSGKTVVFTGS 677 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 L +M+RD+AKA LGAKVAGSVS KTDL++AG AGSKL KA+ LG++ I E E L Sbjct: 678 LERMTRDEAKAMAERLGAKVAGSVSGKTDLLVAGPGAGSKLEKARSLGVKTITEDEWFDL 737 Query: 669 LG 670 +G Sbjct: 738 VG 739 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 836 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 263/665 (39%), Positives = 392/665 (58%), Gaps = 9/665 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ +++ LRT L Y+ DAPE+ D YD+ L ELE PE++TPDS TQ Sbjct: 6 LDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPDSITQ 65 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F+++ H +PMLS+ +VF ++ F++R+Q + V + ELK+DGL+ Sbjct: 66 RVGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVG--HPVEYNVELKIDGLS 123 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y++G LV A+TRG+G GED+T+N R I IP L P +EVRGE ++ + Sbjct: 124 LSLEYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPE---PLTIEVRGECYMGKEA 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F K+N++ G VFANPRNAAAGSLRQLDP++T KR L+ F Y + Sbjct: 181 FAKLNQEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNP--PREITSQH 238 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + + G ++ + +EV F + R +L + IDG+V+KV+ L+ ++QL Sbjct: 239 QAIERMHELGFHTNETGRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQL 298 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G + PRW +A+KFP +EQ T VRD+ + VGRTG +TP A ++PV +AG V+ A+LHN Sbjct: 299 GNTVKVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHN 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D + G+RIGD V + +AGD+IP++ VVLS+RP D+ PT CP CG + +E Sbjct: 359 PDYLNEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLED 418 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ +E + HF SR AM++ G+G KI+ QL+ K+ VH ADL+ LT Sbjct: 419 EVALRCINP-SCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTED 477 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+ KS N++ A++ +K+ + + LGI VG A +A F LE + + Sbjct: 478 DLAQLDHFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMS 537 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI-DSPFA 599 ++++ + +G+ A + +FA+ + +I EL G++ EE D+PF Sbjct: 538 LGVQDIASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMDYLGADEPEEAPDNPFK 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 KTVVLTG L +R + +L LGAKV GSVS KTD VI G+ AGSK KA++LG+ + Sbjct: 598 DKTVVLTGKLEHYTRSEFTKKLQALGAKVTGSVSHKTDYVIYGKDAGSKYNKAEQLGVPL 657 Query: 660 IDEAE 664 + E E Sbjct: 658 LTEEE 662 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 293/669 (43%), Positives = 411/669 (61%), Gaps = 13/669 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +Q++ ELR L Y Y+V+D P + D EYDR +EL +LE + P+ P+S TQRVG Sbjct: 3 QQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L AF ++ H+ MLSLDN F+ E +AF++RV+ +KN E + ELK+DGLA+S+ Sbjct: 63 VVLDAFEKVSHKRRMLSLDNAFNLEDLMAFDERVRQSVKNPE---YVVELKMDGLAISLH 119 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y NG V A TRGDG GED+T+NVRTI +IP+ + ++ LEVRGEV +P+ FE + Sbjct: 120 YHNGRFVQAVTRGDGLVGEDVTNNVRTIASIPMHI---DMEGDLEVRGEVIMPKKSFEAL 176 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE R+ G + FANPRNAAAGS+RQLD RI A R L + Y + TH L Sbjct: 177 NEQRRKQGEEEFANPRNAAAGSIRQLDSRIAASRKLDAYLYYFEGAQQH-AMHTHEEALE 235 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + + V+ +C++ +EV F ++ E R L ++IDG+V+KVN L + LG A Sbjct: 236 ALEAMRIKVNPLRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGTTA 295 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APR+A+A+KFPA+E +T + D+ VGRTG ITP A LEPV VAG VS ATLHN D I Sbjct: 296 KAPRYAIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTTVSAATLHNEDMI 355 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + +RI D V+IR+AGD+IP+VV + R FP CP CGS + R EA Sbjct: 356 KEKDVRINDDVIIRKAGDIIPEVVRSLPERRNGTQGIYKFPQICPFCGSKLVRFADEAAH 415 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK--LTAGKL 482 C C A+ + HF SR AM++D +GDK I+ ++ +++T D+++ L ++ Sbjct: 416 YCMNQ-DCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNTIEDIYELSLHKEEI 474 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LE KS Q ++ A+E +KE L+ LGIREVG+ A LA +G ++ L AA Sbjct: 475 LALEGFQEKSFQKMILAIEASKERPLEDLLFGLGIREVGKKAARVLAKTYGNIDDLMAAE 534 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EL + D+G+V A + +FAE N+ +I+ L G+ + E I F GKT Sbjct: 535 EAELTAIKDIGVVTAQSIRAYFAEPKNKELIAHLKGFGLRMDTDKEVIKESI---FTGKT 591 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG+L + R++AKA L LGA V+GSVSKKTDLVI GEA+GSKL+KA+ELG+ +DE Sbjct: 592 VVLTGTLQYLKRNEAKALLERLGANVSGSVSKKTDLVIYGEASGSKLSKAKELGVATMDE 651 Query: 663 AEMLRLLGS 671 ++ + + Sbjct: 652 EAFMKEVNA 660 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 297/701 (42%), Positives = 420/701 (59%), Gaps = 42/701 (5%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR L +H Y Y+++DAPEI DA +D+++ EL+E+E +P+L+TPDS TQRVG Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVGGYVSEQ 98 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F+ + H M S+D+ D + A+ +R +D L VT+ CELK+DGL V++ Y+NG Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGAG-NVTYTCELKIDGLGVALTYQNGT 157 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKL-------HGENIPARLEVRGEVFLPQAGFE 182 V AATRGDGTTGED++ NVRTI+ +P+ L G + +EVRGEV++P+ F Sbjct: 158 FVRAATRGDGTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFV 217 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+A G FANPRNAAAGSLRQ DP++TA+R L F Y + + + + Sbjct: 218 RLNEEADAEGRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIADTDPLHV-HSQREF 276 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + G V+ V C + EV F + E R L +DIDGVV+KV+S QQ LGF Sbjct: 277 LDWLRSAGFSVNPNVARCATPAEVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQLDLGF 336 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ARAPRWA+AFKFP +E+ T +R++ QVGRTG +TPVA +PV VAG ++ ATLHN D Sbjct: 337 TARAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATLHNID 396 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 EI R +R GD +++ +AGDVIP+VV VL +RP D+ + P CPVCGS V +GE Sbjct: 397 EIRRKNVREGDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHEDGEV 456 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC + C AQ KE L H+VSR MDVDG+GD+I+D+++ +H AD ++LT + Sbjct: 457 AYRCV-SIDCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLTVDDI 515 Query: 483 TGLER--------------------MGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 GL+ +G K+A+ ++ L K+K R L+ALGIR VG+ Sbjct: 516 AGLDTGRTYASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIRHVGK 575 Query: 523 ATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 + +A F +++ L AS E++ + +G +A+ V F A N V+ L G+ Sbjct: 576 SVGEVIAERFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAVLERLRQAGLS 635 Query: 583 WPAPIVINAEEID------------SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 + + P AG T VLTG+L +RD+A A L LGAKV+G Sbjct: 636 LEVDLGAAHAQAAADAGVAGELADAQPLAGLTFVLTGTLVNRTRDEAGAALKVLGAKVSG 695 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 SVSKKT ++AG AGSKL KA++LG+ V+DE + ++L + Sbjct: 696 SVSKKTSYLVAGPKAGSKLTKAEQLGVPVLDEDALEQILAT 736 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 290/660 (43%), Positives = 402/660 (60%), Gaps = 6/660 (0%) Query: 13 TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQ 72 + +H + Y+V+D PE+ D EYDRL REL ELE++ PEL+T DSP++RVG A F+ Sbjct: 22 ELIAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAP 81 Query: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSILYENGVLV 131 +RH VPMLSL+N F E F R++ L +++ + + E KLDGLAV ++YE G Sbjct: 82 VRHAVPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFT 141 Query: 132 SAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRT 191 +TRGDG GE+I++N++TI IP++L GE PARL++RGEV L AGF +NE + Sbjct: 142 LGSTRGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQN 201 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL 251 G +FANPRNAAAGSLRQLDP I+A RPL FF YGV + + + + G Sbjct: 202 GESLFANPRNAAAGSLRQLDPAISAARPLEFFAYGVADADPLAV-GSQQQVIELLAALGF 260 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 LC V+A + ++ + R L ++IDG+V KVN LA Q++LG R PRWA+ Sbjct: 261 KTIPHGHLCPDLAAVIAHFQQLAQRRSQLPYEIDGMVAKVNELALQKRLGSKTRTPRWAI 320 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A KFPA + T + VE+QVGRTGA+TPVARLEPV V GV VS ATLHN EI R LR+ Sbjct: 321 AAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIRRKDLRL 380 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 D V+++RAG+VIP+VV + +R RE+ PTHCP CGS + R E V RC Sbjct: 381 EDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPECGSQLIRPAAEVVLRCPNHRH 440 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQR +L HF + +D++G+G K+++QL V D+F+L A +L L G K Sbjct: 441 CPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLAPLPGWGEK 500 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 A NV+ A+ + + R L ALGIR +GE TA LA FGTLE L AA E+ + Sbjct: 501 KAANVIAAVNRRRRVELGRLLAALGIRHIGEVTAQLLARRFGTLEGLLAAGEEDFLDIEG 560 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAE-GVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G A+ + +FA NR ++ +L E G+ + P + + TG+LS Sbjct: 561 IGPQAAAALVTYFAAPGNREILRQLQEELGLEIQPEGGPEQSQ---PLGDRVFLFTGTLS 617 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 SR +AKAR+ ELG +VA S++++ ++ G GSKL KA+E+G+ ++DE + RLL Sbjct: 618 NWSRSEAKARVKELGGEVATSLNRRVTHLVCGSKPGSKLPKAREMGLTILDEEQFRRLLA 677 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 277/690 (40%), Positives = 414/690 (60%), Gaps = 30/690 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S ++Q+ LR LR H Y Y+V D P I D E+D+ + +L+ LE HPE SP+ RV Sbjct: 2 SPKEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSPSVRV 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ I+H M SLDN + E + KR++ + ++ + CELK DG ++S Sbjct: 62 GGEVTKNFNTIKHINRMYSLDNSYSIEDLRDWEKRIKKIVDG--EIQYTCELKYDGASIS 119 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG V A TRGDG G+++T+NVRTI+++PL+L G+++PA+ E+RGE+ LP GF Sbjct: 120 LHYENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDGFH 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLG 241 K+NE+ G ++ NPRN A+GSL+ D AKRPL Y + G LP + Sbjct: 180 KMNEERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQLA---GENLPVKSQFD 236 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L +KWG L S EEV F + + R L ++ DGVVIKVNSL QQ++LG Sbjct: 237 SLTLARKWGFKAPQESKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F A+AP+WA+A+KF A++ T + ++ +QVGRTG+ITPVA LEPV ++G V A+LHNA Sbjct: 297 FTAKAPKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNA 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+IE+L +R+GD+V + + G++IP++V V L++RP+++ V+ THCP C +++ R EG+ Sbjct: 357 DQIEKLDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGD 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A C + C Q K ++HF+SR+AMD+DG+G + + QLV+ +++ ADL+ LT + Sbjct: 417 AKHYCPNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQ 476 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LERM KSA+N++N +E +K+ F R L+ LGIR VGE A LA ++ ++AL Sbjct: 477 VLPLERMAQKSAENMINGIEASKQVPFERVLFGLGIRYVGETVAKKLAKHYKNVDALLNM 536 Query: 542 SI---------------------EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 EEL VP++G +A + F E +I L G Sbjct: 537 PAEPDKSSIDLFADVSSAADKKMEELTAVPEIGESIAQSLVEFIQNEDQMAIIERLKNTG 596 Query: 581 VHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVI 640 + + + D AGK+ V++G MSR+D K + + G K + S+S KTD +I Sbjct: 597 LQFALSEEQLEGQTD-KLAGKSFVISGVFE-MSRNDLKKLVEDNGGKNSSSISSKTDYLI 654 Query: 641 AGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 G+ G SKL KA++LGI +I E E L ++ Sbjct: 655 RGDKMGPSKLEKAEKLGITMISEQEFLAMI 684 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 289/665 (43%), Positives = 408/665 (61%), Gaps = 8/665 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++ ELR LR+H YLY+V+D PEI D E+DRL R L +LE ++PE++TPDSPTQRV Sbjct: 5 EIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F +I + PMLSL N F E F++RV + V + ELK+DGL+++ Sbjct: 65 GGKASDDFRKIPFKKPMLSLANAFSAEELRDFDRRVHGGIGAMP-VEYITELKIDGLSMN 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YENG L+ TRGDG GED+TSNV+TI+ IPL + EN PA +EVRGEV++P+ F Sbjct: 124 LIYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYI--ENAPAYMEVRGEVYMPRKSFI 181 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +NE+ G FAN RNAAAGSLRQLDP++TA R L FF Y +G EG ++ + Sbjct: 182 ALNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDIS-SQDDL 240 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 LLQ KK+ V+ +S E V+ + E+ R L +D DG+VIKVN QQE LG Sbjct: 241 LLQLKKFHFRVNPHYRKWDSIEGVITGVREWEKKRRELDYDTDGMVIKVNDFRQQELLGA 300 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + P+WA+A+K+P +E +T + + +GRTG +TP A L PV +AG V ATLHN D Sbjct: 301 TGKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRATLHNLD 360 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I +R GD V+I +AG++IP++ V+ +R +E P +CPVCG+ + R++ EA Sbjct: 361 FIREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIRRIDTEA 420 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC CG +E L HF SR AMD++G+G ++D L+ V AD + L L Sbjct: 421 AFRCINP-ACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYALKEDDL 479 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 +ERMG KSA N++ A+ +KE A+ L+ LGIR +GE + A YF T++A+ AA Sbjct: 480 RQIERMGEKSAANLITAIRASKERGLAKLLFGLGIRFLGEKGSELAAHYFHTIDAIMAAD 539 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E +++ +G + A ++++F +E N +I++L GV I E F+G++ Sbjct: 540 VETIEETEGIGKITAKSLYDYFHDEKNIEMINKLKNAGVLMEE---IKEESESGMFSGES 596 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG L+ M R +A + LG SV+ T LV+AGE AGSKL KA+ GI VIDE Sbjct: 597 VVLTGKLAVMGRREASELIKRLGGTTQSSVTNITTLVVAGEDAGSKLEKARAKGIPVIDE 656 Query: 663 AEMLR 667 E L+ Sbjct: 657 QEFLK 661 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 284/673 (42%), Positives = 402/673 (59%), Gaps = 13/673 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++ ELR L + Y+V D P I D EYDRLM+EL LE K+PE+ SP+Q Sbjct: 3 MMDEKARILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSPSQ 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+ + L F ++ H+ MLSL NVF++E F +R+ + + N E + E K DGLA Sbjct: 63 RIIGSVLDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVSNPE---FVVECKYDGLA 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LY++G A TRGDG GED+++NV+TI +IP+ + +EVRGEV++P+A Sbjct: 120 MALLYDDGNFTRAVTRGDGIVGEDVSNNVKTILSIPMHIPEMR---HVEVRGEVYMPKAS 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N+ G FANPRNAAAGS+RQLD I A R L + Y + T Sbjct: 177 FEQLNKRQEEKGLAPFANPRNAAAGSIRQLDSSICASRKLDAYWYYFQNASDFAV-QTQE 235 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L K + +C + E++ F +++E R L ++IDG+VIK+N+LA Q +L Sbjct: 236 EALQAMSKMHFRTNPLRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRRL 295 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A+ PR+A A+KFPAQE +T ++D+ VGRTG ITP A LEPV VAG VS A LHN Sbjct: 296 GSTAKVPRYATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHN 355 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I LRIGD VV+R+AG++IP+VV V R FPT CP+CGS + R+ Sbjct: 356 EDMIVNKDLRIGDIVVVRKAGEIIPEVVTSVPERRDGTQVPYKFPTTCPICGSHLVRLPD 415 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 EA C C A+ ES+ HF SR AM++D +GDK I+QL E Y+++ D++ L Sbjct: 416 EAAHYCINQ-DCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIYFLDRY 474 Query: 480 -GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L KS ++ ++EK+K+ LY LGIR+VG+ A LA FG ++ L Sbjct: 475 YDELIEKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGIRQVGKKAAMILAEQFGDIDTL 534 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 A ++EL + D+G++ AS V FF EE N ++I L G ++ + ++S F Sbjct: 535 MHACVDELVLIHDIGLITASSVVAFFKEEKNLHLIDVLKQAGCNFKQE---KKQVVESRF 591 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 KT VLTG+L +R++AKA L LGA V+GSVSKKTD VI G AAGSKL KAQ LG+ Sbjct: 592 TNKTCVLTGTLEHYTRNEAKAILESLGANVSGSVSKKTDYVIYGTAAGSKLTKAQSLGVM 651 Query: 659 VIDEAEMLRLLGS 671 + E E ++ + + Sbjct: 652 TMSEEEFVQEVEN 664 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 285/673 (42%), Positives = 422/673 (62%), Gaps = 10/673 (1%) Query: 1 MESI---EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ME I ++ ELR LR HEY Y+V+ +P I D EYD +M++L ELE ++PE +PDS Sbjct: 1 MEKIVPPAVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDS 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PT RVG+ F+ +RH+ PMLSL N ++ + F +RV + L+ ELK D Sbjct: 61 PTHRVGSDKTEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQG-APFEIVAELKFD 119 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL++S++YE+G+LV A TRGDG G+D+T+NVRTIR++PL+L G++ P LEVRGE+ LP Sbjct: 120 GLSISLIYEDGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLP 179 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 F++IN G +FANPRNAA+G+++QLDP I A R L + Y + E L + Sbjct: 180 FKEFDRINAQREAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEP--LAE 237 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H RL+Q ++WG VSD VTLC S E+V AF + + +R TL DG+V+KVN+ AQQ Sbjct: 238 NHYDRLMQARQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQ 297 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LGF A++PRWA+A+K+ A+ T ++ V +QVGRTGA+TPVA L+PV ++G +V A+ Sbjct: 298 DLLGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRAS 357 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNAD I L GD V + + G++IP++V V R D R +VF CP C + + R Sbjct: 358 LHNADFIAEKDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVR 417 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 +GEA C C Q+K L+H+ R+A D+ +G + I+ L + + AD + L Sbjct: 418 EQGEAAYYCPNAEGCPQQQKGRLEHYCGRKAADI-NIGPETIELLYSRNMIRNVADFYAL 476 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T +L L ++A +++++E +K + L+ LGIR VGE A LAA + +++A Sbjct: 477 TEEQLLTLPGFKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDA 536 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L AA+ EEL ++ ++G +A+ V +FF+ NR +I L GV A V + + Sbjct: 537 LAAATSEELVQIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEAETVSVP--VSAR 594 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELG 656 AGKTVV++G+ + SRD+ KA + + G ++AGSVS KT ++AG G SK KA++LG Sbjct: 595 LAGKTVVISGTFEKYSRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGPSKREKAEKLG 654 Query: 657 IEVIDEAEMLRLL 669 + ++ E E LRL+ Sbjct: 655 VRLMSEEEFLRLI 667 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 306/671 (45%), Positives = 418/671 (62%), Gaps = 7/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ ELR +R+H + Y+V+D PEIPDAEYD L REL+ELE ++P L DSP+++ Sbjct: 12 EQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADSPSRQ 71 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA PLA F+ + H +PMLSL+N F+E F R+ L ++ E KLDGLAV Sbjct: 72 VGAEPLAQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPKLDGLAV 131 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--GENIPARLEVRGEVFLPQA 179 ++YE+G+ +TRGDG TGE+IT+N+ TI IP +L G PARLE+RGEV L Sbjct: 132 ELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGEVCLSIT 191 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 GF+++N G +FANPRNAAAGSLRQLDP ITA RPL FF YG + T Sbjct: 192 GFKELNRRRGEAGESLFANPRNAAAGSLRQLDPAITADRPLEFFAYGAADSAALAVT-TQ 250 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L Q +GL + +C E LA + ++E R + ++IDG+V+KVN LA Q++ Sbjct: 251 AQLLEQLHAFGLQLIPHGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLKVNDLALQKR 310 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG AR+PRWAVA KF A + T + VEFQVGRTGA+TPVA LEPV V GVLVS ATLH Sbjct: 311 LGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGVLVSRATLH 370 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+R LR+ D V+++RAG+VIP+VV V +R D + + P +CP C + R E Sbjct: 371 NEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPANCPECDHALIRKE 430 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GEAV RC C AQR SL HF S+ +D+DG+G K ++ LV+ V D+++L Sbjct: 431 GEAVRRCPNPQ-CPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLVGDIPDIYRLRP 489 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L G KSA V +A+ AK AR L ALGIR VGE A LA +F +LEAL+ Sbjct: 490 EQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVLARHFPSLEALQ 549 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E+ +V +G VA+ + FF + + ++++L G+ + P Sbjct: 550 QAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELGLTISPEEQPAQQL---PLQ 606 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 + + TGSL+ MSR++AKAR+ ELG +VA +++K ++ G+ GSKL KA+EL +E+ Sbjct: 607 NRVFLFTGSLAGMSRNEAKARVKELGGQVATGLNRKVTHLVCGDKPGSKLTKARELELEI 666 Query: 660 IDEAEMLRLLG 670 + EA+ RLLG Sbjct: 667 LTEADFARLLG 677 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 302/666 (45%), Positives = 396/666 (59%), Gaps = 8/666 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + EL L H Y Y+V+D+P + DAEYDRLMREL LE HPEL TPDSPTQ+V Sbjct: 60 RARAAELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKVAG 119 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 + F+ + H +LSLDNVFD++ F + R E W CELK+DGLAV ++ Sbjct: 120 SYSTLFTPVEHLERLLSLDNVFDDDEFHLWAARAARE---TEVDGWLCELKIDGLAVDLV 176 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G LV AATRGDG TGEDIT N+RT+ ++P +L G ++P LEVRGEVF P F ++ Sbjct: 177 YEEGRLVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPTEKFAEL 236 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N GGK FANPRNAAAGSLRQ DPR+TA RPL +G+G G + + Sbjct: 237 NASLVAGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGLGAQRGFDAA-SQSAAYA 295 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +F ++GLPVS + S +VLAF H+ R + +IDGVV+KV++ A Q +LG + Sbjct: 296 RFAEFGLPVSTHFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQRRLGSTS 355 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APRWAVAFK+P +E T +RD+ VGRTG +TP LEPV VAG V ATLHN DE+ Sbjct: 356 KAPRWAVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATLHNVDEV 415 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 R G+ IGD VV+R+AGDVIP++V V+ R R V PTHCP CG+++ R EGE Sbjct: 416 GRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRPEGEVDI 475 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC C AQ +E + H SR A+D+DG+G + L+E + V D+F LT G Sbjct: 476 RCPNTDACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHLTPESFEG 535 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L G K ++ +E A+ R L L IR VG A LA +L+A+ AA E Sbjct: 536 LRGFGQKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARALARELRSLDAIAAAPAE 595 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L V VG +AS V ++FA+ +R++++ + A G A E P G VV Sbjct: 596 QLAAVEGVGPKIASAVVDWFADARHRDIVARIAAGGASLAD---AGAAEGPRPLDGVAVV 652 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEA 663 +TG+L SRD A + G KV GSVSKKT V+ G G +K KA+ LG+ V+DEA Sbjct: 653 ITGTLDGWSRDSATEAVQGRGGKVTGSVSKKTAFVVVGADPGAAKYDKARSLGVPVLDEA 712 Query: 664 EMLRLL 669 LL Sbjct: 713 GFAVLL 718 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 298/765 (38%), Positives = 410/765 (53%), Gaps = 98/765 (12%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +EQ LR L+ Y Y+V+D P + DA YD L+REL+ELE+++P+LI DSPTQRV Sbjct: 7 EVEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL-------------------- 102 G P F ++H +P+ SL+N F+ + ++ +R Q + Sbjct: 67 GEKPATKFVSVKHNIPLYSLENAFNIQELKSWQERWQRQTLLENQRLTLPLRGEVKIKNS 126 Query: 103 ------------------------KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGD 138 + V + CELK+DG A+++ YENG+LV ATRGD Sbjct: 127 IDESDNFSTVNSLAPVITGSNFDEIDLASVDYICELKIDGSALALTYENGLLVRGATRGD 186 Query: 139 GTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFAN 198 G GEDIT NV+TI +IPLKL +N P +EVRGE FL FE IN + + G +FAN Sbjct: 187 GIMGEDITQNVKTINSIPLKLKVDNPPLLVEVRGEAFLSINVFENINAEREKIGEIIFAN 246 Query: 199 PRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---DTHLGRLLQFKKWGLPVSD 255 PRNAAAG+LRQLD +I AKR L FF Y + + E T L KK G V+ Sbjct: 247 PRNAAAGTLRQLDSKIVAKRRLDFFAYTLYLEENESNFLQFYTQSQCLELLKKLGFKVNP 306 Query: 256 RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 +C S EV A+Y ++ R L + DGVV+K+NSL+ QE+LGF + PRWA+A K+ Sbjct: 307 NGQVCSSLNEVEAYYQYWDKQRENLPYLTDGVVVKLNSLSLQEKLGFTQKYPRWAIALKY 366 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKV 375 PA+E T V+ V QVGRTGAITPVA L+PV +AG V A+LHN+D + L L IGD V Sbjct: 367 PAEEIPTIVQGVTVQVGRTGAITPVAELKPVQLAGTTVQRASLHNSDRLAELDLHIGDTV 426 Query: 376 VIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 ++R+AG++IP+VV V+ RP+ + PTHCP C + + EAV RC C A Sbjct: 427 IVRKAGEIIPEVVRVLPELRPKKAQRFQMPTHCPECSQPLIKPRNEAVTRCINT-SCPAI 485 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 + SL H+ SR A+D++G+G+K++ QLV V + ADL+ LT LT LERMG KSA Sbjct: 486 LRGSLAHWASRAALDINGLGEKLVQQLVNSGLVKSVADLYNLTMEDLTSLERMGKKSANK 545 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 ++ A+ +K + R LY LGIR VG A L F T+ L A +++ V +G Sbjct: 546 LIEAMGTSKAQPWRRVLYGLGIRHVGTVNAELLTQKFPTVAQLSQAKATDIETVHGIGPE 605 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN------------------------- 590 +A +V +F +N+N++ L GV + Sbjct: 606 IAQYVEQWFRVPANQNLVERLKIAGVTMETKDSTSGMAKLTETVLAIQNLAARQNLVARQ 665 Query: 591 -------------------------AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELG 625 E GKT VLTG+L M RD+AK + G Sbjct: 666 NLENLVERLKIAGVTMETKDSTSDVVEVQSGLLRGKTFVLTGTLPTMRRDEAKNLIQNAG 725 Query: 626 AKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KV SVS KTD ++ GE GSKL KA++LG++ + E+E+L L Sbjct: 726 GKVTSSVSSKTDFIVVGEDGGSKLEKAKKLGVKELSESELLEALA 770 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 279/671 (41%), Positives = 406/671 (60%), Gaps = 7/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+I+Q++ LR + H Y Y+ +D P I D E+D ++EL++LE + PE +SPT R Sbjct: 3 ENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTLR 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F ++H+ M SLDN +D + KR++ L NE V + ELK DG ++ Sbjct: 63 VGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTL--NEPVEFVAELKYDGASI 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SILYENG L A TRGDG G++ITSNV+TI IP++LHG + P R +RGE++L F Sbjct: 121 SILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHG-DFPERFFMRGEIYLTHQNF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ G F NPRN A+GSL+ D KR L+ Y + TH Sbjct: 180 EKINKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLYQF--ISENTAAQTHWE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + K WG +SD+ LC +EV AF + +E+R TL FDIDG+V+KVN LAQQ LG Sbjct: 238 LLQKAKSWGFRISDQAKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDLAQQRVLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A++PRWA+A+K+ A++ T ++ V +QVGRTGAITPVA L+PV +AG +V A+LHN Sbjct: 298 YTAKSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVKRASLHNE 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +LGL D V + + G++IP++V V L++R E+ + +CP C + + RVE + Sbjct: 358 DIIRKLGLYEHDFVYVEKGGEIIPKIVGVNLAKRNPANAEIQYIKNCPECSTALIRVEDQ 417 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C L C Q + H+VSR+A++++ +G + I+QL ++ V PAD + LT + Sbjct: 418 AIHFCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LERM KSAQN++ +EK+KE F + L+ +GI+ VGE A L F +++ L+ A Sbjct: 478 LLPLERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKNFNSIDDLKNA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + EL +V D+G+ +A + FF N +I L + GV E + + GK Sbjct: 538 TAAELVQVEDIGLKIAESITEFFKNPENVLMIERLKSYGVKLE-KGADTHEVLSNALDGK 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVI 660 T + TG LS +RDDA+ + + G K +VSK D ++ GE AGSKL KAQE+G I ++ Sbjct: 597 TFLFTGKLSLFTRDDAEEMVEKHGGKNISAVSKNLDFLVVGEKAGSKLKKAQEIGTITIL 656 Query: 661 DEAEMLRLLGS 671 DE + L LL + Sbjct: 657 DEQQFLDLLQA 667 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 268/678 (39%), Positives = 397/678 (58%), Gaps = 14/678 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E E + +LR +R+H++ Y+V+ P I D EYD+L L+++E++ PELITPDSPTQR Sbjct: 29 EDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPELITPDSPTQR 88 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V + F Q++H PMLSLDN ++EE F++RV++ + + + + E K DG + Sbjct: 89 VPSELTKEFPQVKHLAPMLSLDNSYNEEDLREFDRRVREAVGID-IIEYAVEPKFDGAGI 147 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP-ARLEVRGEVFLPQAG 180 S++YE + V ATRGDG GEDIT N+R I+ +PL R+E+RGEV + + Sbjct: 148 SLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYGIDRIEIRGEVLINKEK 207 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD--- 237 F++IN G ANPRNAAAGSLR DP+ AKR L F Y + + + Sbjct: 208 FKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITYAVDKDGNNLLG 267 Query: 238 ----THLGRLLQFKKWGLPVS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 H + + G + +C +EV+ + + E R ++IDG+VIKVN Sbjct: 268 NKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYPYEIDGMVIKVN 327 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 ++ ++LG + PRWA+AFKF A++ T + V FQVGRTGA+TPVA+LEPV + GV Sbjct: 328 DISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVAKLEPVEIGGVT 387 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS+ +L N D I+ +R+GD V+I RAGDVIP VV VV R + + FP CP CG Sbjct: 388 VSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKPIQFPKECPSCG 447 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S + + GEAV RC + C AQ E + +F S+ AMD+ G+G+ I + + ++ + Sbjct: 448 SPLVKPAGEAVWRCIN-INCPAQVVERIIYFASKDAMDIRGLGEANIRKFYQLGFLRSIP 506 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 D+++L K+ LE G KS +N+ A+E++K R + LGIR VG+ TA LA Sbjct: 507 DIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGKVTARTLAENI 566 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +E L+ S+E+L+++PDVG VVA +++FF N +I EL GV E Sbjct: 567 NCVEDLKDWSVEDLERLPDVGYVVAHSIYDFFHNPDNIKMIQELKRLGVQTCKE---KEE 623 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 +++ F GKT V TG+LS SR+ A+ + LG + SVS+KT V+ GE GSK KA Sbjct: 624 VVENIFEGKTFVFTGTLSCCSREIAQEIVERLGGHASSSVSRKTSYVVVGENPGSKYRKA 683 Query: 653 QELGIEVIDEAEMLRLLG 670 LG++++DE + + ++ Sbjct: 684 LSLGVQILDEKQFIEMIK 701 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 313/685 (45%), Positives = 415/685 (60%), Gaps = 26/685 (3%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 LR L +H + Y+V+D EI DAEYD L REL+++E + P L TPDSPT RVG +A Sbjct: 38 EALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVA 97 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 A H + M SLDN F E + F +R+ + + + C+ K+DGLA+ ++YENG Sbjct: 98 ALETQAHTLRMYSLDNAFSAEEWDGFIQRMLRA-EPDAPTAFWCDPKMDGLALEVIYENG 156 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-PARLEVRGEVFLPQAGFEKINED 187 V +A TRGDG GE +T+ +RT+R +PL+LHGE PARLEVRGEV + +A F+ +N Sbjct: 157 VFTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAA 216 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD---------- 237 R G K+FANPRNAAAGS+RQLD +TA RPL F YGVG + Sbjct: 217 RRGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGP 276 Query: 238 -----THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 TH + +G CE+ +V+A+Y + R L FDIDGVV K++ Sbjct: 277 EARWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDGVVAKLD 336 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L+ Q LG+ ARAPRWA+A KFPA + T + + QVGRTG +TPVA L PV V GV Sbjct: 337 DLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVT 396 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE-DTREVVFPTHCPVC 411 VS ATLHN DEI LR+GD VV++RAGDVIP+VV ++ +RP E FP CPVC Sbjct: 397 VSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECPVC 456 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + V R GEA RC + C A ++S+ HFVS+ +D+ G+G + ++ LV++ V +P Sbjct: 457 HTPVRREPGEAAWRCVN-VGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVTSP 515 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKET-TFARFLYALGIREVGEATAAGLAA 530 ADLF L L ERMGPK A+N + A + A+ T R + ALGIR VGE TA LAA Sbjct: 516 ADLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTLAA 575 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 +F L+AL AA E LQ++PD+G VA+ + FFA E NR ++ L G+ P+ Sbjct: 576 HFADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGLWPVRPVRPE 635 Query: 591 AE------EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 A+ E P AG V+ TGSL+ ++R DA+ R V GA + GSVSKK DL++ G+ Sbjct: 636 ADAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVSKKLDLLVVGDK 695 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLL 669 GSKL KA +LGI V+ E E L LL Sbjct: 696 PGSKLDKATKLGIRVLREQEFLDLL 720 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 273/674 (40%), Positives = 409/674 (60%), Gaps = 17/674 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ ++ LR + HH LY+ + PEI D EYD L++EL+ELE ++ E +SPTQ+ Sbjct: 4 NELKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESPTQK 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG+ I H+V M SL+N + E LAF R + L +C ELK+DG ++ Sbjct: 64 VGSDLTPGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYAS--EYCAELKIDGFSI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YENG + A TRGDG GED+T N R + +P + + +E+RGE+++P F Sbjct: 122 NLYYENGNFIYATTRGDGLEGEDVTENFRLLPDVPFTI---DYKGAIEIRGEIYIPVQDF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-----ELP 236 +NE R K FANPRNAAAGS++ R L Y +G E E+ Sbjct: 179 LALNEFRRENELKTFANPRNAAAGSIKLKSREEVKSRHLKALFYALGYYETPLQYKNEII 238 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 D L + G P S R TLC+ +E F ++E++R T+ +DIDG+VIKVNSL Sbjct: 239 DKQTRLLDFLDELGFPTSKR-TLCKHYQEAEKFCLQMEQERYTIPYDIDGIVIKVNSLED 297 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q++LG+ A++P+WA+A+KF +E+ T + V FQVGRTGA+TPVA L+PV ++G VS+A Sbjct: 298 QKKLGWTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHA 357 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHNADEI+RL L GD V++ ++G++IP++++V +S+RP + + V+FP CPVC + ++ Sbjct: 358 TLHNADEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQ 417 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R E ++ C C AQ + L+HF SR AMD+ G+G +I +L+E + D++ Sbjct: 418 RDEDGSINYCPNA-NCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYH 476 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 L K+ +ERMG KSA N+ A+E +K F R L+ALGIR +G TA LA +F ++ Sbjct: 477 LDYNKIAEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTLAQHFKNID 536 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL A EEL VPD+G ++A + FF+++SNR +I L G+ + + + + Sbjct: 537 ALIMAKEEELLSVPDIGSIIARSIIGFFSQKSNRELIDSLRKVGLQFTYI----SPQSSA 592 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AGKT ++TG+L SR D + + E G K+ VSK+ + +I GE GSKL KA +LG Sbjct: 593 ILAGKTFLITGTLPNYSRKDMETLITEHGGKILSGVSKQLNYLIVGENPGSKLDKAHQLG 652 Query: 657 -IEVIDEAEMLRLL 669 +++I EAE+L +L Sbjct: 653 TVKIISEAELLDML 666 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 308/668 (46%), Positives = 435/668 (65%), Gaps = 8/668 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ + +L L YLYH +D P I D++YD+L R L++L +P+ +S RV Sbjct: 18 ELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRV 77 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G LA F I+H+ M SL NVF E F +++ + CE K+DGLA+S Sbjct: 78 GGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIE------YDIELECEPKMDGLAIS 131 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 I Y+NG A TRGDG GE ++ NV+TIR +PLKL+ N P LEVRGE+ L + F Sbjct: 132 IFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFL 191 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLG 241 +NE + K FANPRNAAAGS+R LD ++ AKRPL + YG+G + P+T Sbjct: 192 SLNEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFE 251 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + + +G +SD + L ++ EV ++HK+ R L +DIDG+V KVN++ Q+ +G Sbjct: 252 LMQLLQSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIG 311 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + AR P+WA+A+KFPA+E + V +VEFQVGRTGAITPVARL+PV V GV+VSNATLHN Sbjct: 312 YTARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNI 371 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 +EI+ +R+GD+V++RRAGDVIP+VV + R D + V PT+CPVC S +E V + Sbjct: 372 NEIKSKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEMPTNCPVCDSKIENVNDQ 431 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ RCTGG C AQ E LKHFVSR+AMD+D +G K+I+QLV + PAD++KL + Sbjct: 432 AIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQ 491 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 LTGLERM KS+QNV++++ K+KE + ARF++A+GI+++GE ++ LA +FG+LE+ A Sbjct: 492 LTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDA 551 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 EEL ++ VG ++A+++ +F+ + N ++ E LA G+ P+ + +S F GK Sbjct: 552 KFEELIEINYVGEIIANNIVSFWHDSLNIKIVEEFLAIGIKIQNPVKVEHAYNES-FTGK 610 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TGS R + L +GAKV SVSKKTD+VI G+ AGSKL KAQELG+EVI Sbjct: 611 TVVITGSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGDNAGSKLTKAQELGVEVIL 670 Query: 662 EAEMLRLL 669 E + LL Sbjct: 671 EDNLKDLL 678 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 287/670 (42%), Positives = 409/670 (61%), Gaps = 14/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I++++ +LR+ + +H LY+ +D EI DAEYD L L+ LE +P+ SPTQ Sbjct: 1 MDKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 ++G A F+ + H M+SLDN + E L +++R L + E K+DG++ Sbjct: 61 KIGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHG-NFEMVAEAKIDGVS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YE GVL AATRGDG TGED+T+N++TI+ IP + +N ++E+RGE+++ +A Sbjct: 120 CSLTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNISFKN---KIEIRGEIYIEKAD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 +++NE G +FAN RNAAAGS+RQ + I+A RPL FF + G G Sbjct: 177 LKRLNEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGY--GDVDVKGFA 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + K WG V+ E+ +FY + EE R L +D+DG+V+K+NS A+Q+ L Sbjct: 235 EFMDLCKSWGFSVTPNRIRTADINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A++PRWA+AFK+ + T V + F VGRTG ITPVA LEPV VAGV++SNATLHN Sbjct: 295 GVTAKSPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI+RLG++ GD V++ RAG+VIP+++NVV + EV P +CP CGS V R E Sbjct: 355 FDEIKRLGVKEGDTVIVERAGEVIPKILNVV---KDGGGNEVKAPKNCPSCGSKVYRYED 411 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ K L HFVSR AMD+DG G+ +++Q+VEK+YV AD++ L A Sbjct: 412 EVAIRCINP-ACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAE 470 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L L+ K N++ A+E +K+ + +R LYA GIR VG+ T LA +F +E + A Sbjct: 471 QLLTLDLFKDKKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENMLA 530 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 AS+E+ QK+ ++G VV V++F + I+ L GV++ P V + + G Sbjct: 531 ASLEDFQKINEIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQPKV---QLAGNELLG 587 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+V TG L M R A+A G KV+GSVS KT V+AG AGSKL KAQ LG+ VI Sbjct: 588 KTLVFTGEL-NMPRTQAEALAKAHGGKVSGSVSSKTSYVVAGADAGSKLTKAQSLGVSVI 646 Query: 661 DEAEMLRLLG 670 E E L L+ Sbjct: 647 SEEEFLNLIK 656 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 274/695 (39%), Positives = 409/695 (58%), Gaps = 34/695 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E+Q+ +L L + + Y+ E+ D +D+L+ +L LE ++PE PDSPT RVG Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYPEFRQPDSPTARVGG 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + H PMLSL N + EE + F+KRVQ L N + + CELK DG+A+S+ Sbjct: 64 TISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGL-NGQTYEYICELKFDGVALSLT 122 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL---------------HGENIPARLE 169 YENGVLV ATRGDG G+DIT+N+RTIR +PL++ +PA E Sbjct: 123 YENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAALPALFE 182 Query: 170 VRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV 229 VRGE FLP A F++IN++ G + ANPRNAA+G+ +Q D AKR L + Y Sbjct: 183 VRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLDCYLYSF-- 240 Query: 230 LEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 L ++ TH L+ WG VS C +EV+A+ ++ E R L DG+VI Sbjct: 241 LSDTDIFQTHEESLVAMNAWGFNVSPTWRKCTDIQEVMAYINEWETKRFDLPLGTDGIVI 300 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN QQ LG+ A++PRWA+AFK+ A T + +++QVGRTGA+TPVA L PV +A Sbjct: 301 KVNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTPVLLA 360 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G +V A+LHNA+EIERLG+ + D V + + G++IP++ V L+ R + ++ +V+PT CP Sbjct: 361 GTIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQPIVYPTTCP 420 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CG+ + R EGEA C C QR+ +HF+ RRAM+++ +G+ I+ L+++ V Sbjct: 421 ACGTALVRKEGEAHFYCPNEQGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDRGLVQ 480 Query: 470 TPADLFKLTAGKLTGLER--------------MGPKSAQNVVNALEKAKETTFARFLYAL 515 TPADL+ L A L G+E+ K+ +N++ A+E++K FA L+ L Sbjct: 481 TPADLYDLKATDLLGIEKVFLVEETGKKRVVSFREKTVENILTAIERSKSQPFANVLFGL 540 Query: 516 GIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 GIR VG TA L YFG+++A+ A+ E+L VPD G +A V +F + +N+ + Sbjct: 541 GIRYVGNTTAEKLVDYFGSMDAIMNATQEQLLAVPDTGPRIAESVVAWFGDTANQEFVER 600 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L A G+ + + +E DS GKT + TG+ + SR++ ++R+ G K+ +SKK Sbjct: 601 LRAAGLQFVGEKKVVEQEGDS-LTGKTFLYTGTFANFSREELESRIEANGGKLLSGISKK 659 Query: 636 TDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 + +I GE AG SK+ KA++L + +I E E + +L Sbjct: 660 LNYLIVGENAGPSKVEKAKKLNVPMIGEDEFMAML 694 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 293/667 (43%), Positives = 396/667 (59%), Gaps = 12/667 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + LR + H Y+ DAPEI D EYD L R LR++E +HPE + DSP Q +G A Sbjct: 11 ARYLALRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDSPVQTIGGA 70 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVTWCCELKLDGLAVS 122 P AAF + H PM SLDNVFD + + +++ L ++ T+ E+K+DGL+V+ Sbjct: 71 PSAAFEPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTGEIKIDGLSVN 130 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y +G L AATRG+G GE +T+ V TI IP L G + +LEVRGEV+L +A F Sbjct: 131 LYYLDGTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDG--LKGQLEVRGEVYLSRADFA 188 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 N A G + NPRN AAG+LRQ DP +T R L Y +G +G E T Sbjct: 189 AFNAQAEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFYSLGRRDGVEA-RTQSEV 247 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L G PVS ++ ++ E R FD DG VIK++ LA QE+ GF Sbjct: 248 LQWLAGRGFPVSHYSETFRGYVAAADYHRRMTEARSNFEFDADGTVIKLDPLALQEEAGF 307 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +RAPRWA+AFKFP ++ T + + VGRTG + P+A L P + G VS ATLHN D Sbjct: 308 TSRAPRWAIAFKFPVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGSTVSKATLHNED 367 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I ++ LR+GD VV+R++G VIPQ++ VV +RPE T VFPT+CP CG +V R EG+A Sbjct: 368 YIRQMDLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECGHEVTRAEGDA 427 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 C C AQR E +++FVSR AMDV G+G+K++ Q++E V ADL+ LTA +L Sbjct: 428 NTYCPNP-ACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAADLYLLTAEQL 486 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 GLER G K AQNV+ LE +K R + ALG+ VGE A LA FG+L+AL A+ Sbjct: 487 AGLERGGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAFGSLDALLRAT 546 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E+++ VP +G V A V A+ + RN+I L A G+ + E+ AG Sbjct: 547 PEQIEAVPGMGKVTAVSVSAALADPTMRNLIERLRAAGMSPEETQTVRGEQ----LAGLN 602 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V+TGSLSQ RD+ KA L GA+V GSV++KT +IAG+ AGSKL +A+EL + V+DE Sbjct: 603 FVITGSLSQ-PRDELKALLEAAGARVTGSVTRKTSYLIAGQDAGSKLDRARELAVPVLDE 661 Query: 663 AEMLRLL 669 A + LL Sbjct: 662 AALGTLL 668 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 822 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 278/676 (41%), Positives = 392/676 (57%), Gaps = 17/676 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ ELR + H+ LYH P+I D EYD L REL ELE P+ SPT++V Sbjct: 5 EAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPTEQV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F RH M+SLDN + E F+ R+ L+ + + + E K+DGLAVS Sbjct: 65 GDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERD-GLKFVIEPKIDGLAVS 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVFLPQA 179 I YE G LV A TRG+G G+DIT+N TI+++P +L G +PA +E+RGEVFL Sbjct: 124 ITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTE 183 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE-LPDT 238 F +IN G ++ANPRN AAG+++QLDPR A+R L YG G +E LP+T Sbjct: 184 EFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPET 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 K WGLP +R A+E+ A +++ R T + DG V+K++++ Q Sbjct: 244 QAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQR 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + G +++PRWA+A+KF T +R + QVGRTG +TPVA L+PV +AG VS ATL Sbjct: 304 RAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI R +R+GD V + +AG++IP V+ V + R + VFP CP CG+ V ++ Sbjct: 364 HNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTAVVQL 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGE RC C Q + ++HF S+ +D++GMG+ ++D LVEK +VH+ D+++L Sbjct: 424 EGEVAVRCPN-FSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDIYQLK 482 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L L + KS ++ A+E +K RF++ LGI G A A LA FG LE L Sbjct: 483 RENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGGLERL 542 Query: 539 EAASIEELQK-----VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +A E+ + + +G +A + +FAE NR V+ EL+ GV P Sbjct: 543 ASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQPVVP------N 596 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 S AGKT VLTG+L ++RD+A A++ G KV+ VSKKT V+AGE AGSKL KA+ Sbjct: 597 SGSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKAR 656 Query: 654 ELGIEVIDEAEMLRLL 669 L + VIDEAE LRLL Sbjct: 657 ALAVPVIDEAEFLRLL 672 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 324/696 (46%), Positives = 419/696 (60%), Gaps = 34/696 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +S E + ELR + ++ Y+V+D P + DAEYDRL+REL E+E HPEL T DSPTQR Sbjct: 8 DSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDSPTQR 67 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 V AP F ++ H PMLSL N+ + F+ RV L + +V + E KLDGL Sbjct: 68 VSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPKLDGL 127 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTI------RAIPLKLHGENIPARLEVRGE 173 AV ++YE G LV +TRGDG GED+T+N+RT+ R +P +L GE +P R+EVRGE Sbjct: 128 AVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGE-VPPRVEVRGE 186 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV------ 227 V L + FE +N R G + FANPRNAAAGSLRQLD R+TA+RPL+F Y Sbjct: 187 VLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEALVPGAE 246 Query: 228 --GVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 G G TH +L +WG + CE V A+ ++ E R L +D D Sbjct: 247 PGGARAGPWAWRTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMAERRFALPYDTD 306 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 GVV+KV+ L + +LG ++ PRWAVAFK+P QE+ T +R + VGRTG +TPV EP Sbjct: 307 GVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTPVVDFEP 366 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V ++G +VS ATLHN DE+ R + GD +++RRAG+VIP+VV + R + R FP Sbjct: 367 VRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEERPFAFP 426 Query: 406 THCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP+CG+ V R EGE V RCT G C AQ L HF RRAMD+DG+GDK+ LVE+ Sbjct: 427 AECPICGAKVVREEGEKVYRCT-GAACPAQLVGRLTHFAQRRAMDIDGLGDKLALGLVER 485 Query: 466 EYVHTPADLFKLTAGKLTGLE------------RMGPKSAQNVVNALEKAKETTFARFLY 513 V ADL+ + L + KSAQN+V+ALE++K TT R L+ Sbjct: 486 GLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTLRRLLF 545 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ALGI +VGEATAA LA +FG L AS + L V DVG A + + E NR V+ Sbjct: 546 ALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQNRRVV 605 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 LLA GV + PFAGKTVVLTG L+ +SRDDAKA + G KV+GSVS Sbjct: 606 ERLLAAGVR----PAPETVDAGGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSVS 661 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +KTDLV+AG AGSKL KAQ LG+ V+ E E LR+L Sbjct: 662 RKTDLVVAGAEAGSKLEKAQALGVRVVGEEEFLRML 697 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 278/670 (41%), Positives = 399/670 (59%), Gaps = 15/670 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I+ ++ ELR + YLYH D P I D YD LMREL ELETK+PE SPT+++ Sbjct: 2 DIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKI 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G L AF + H VPM+SL N+F++E F R+Q + N ++ ELK+DGLAV+ Sbjct: 62 GGVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPN---TSFTTELKIDGLAVT 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YE G+ AATRG+G GEDIT NV+TI+ +PL+L P +EVRGE+++ F+ Sbjct: 119 LIYEKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSK---PLDIEVRGEIYMSHKTFK 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++N + + +F NPRNAAAG++RQLD ++ AKR L F Y V T Sbjct: 176 EVNLERANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTVVGASN--FNSTQKET 233 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + G PV+ L ++ + + + R TL +D DGVVIKVN E +G+ Sbjct: 234 LEFLSELGFPVNPHYKLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGY 293 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A+ P++A A+KF A++Q+T V D+ FQVGRTG ITPVA L PV ++G LVS ATLHN D Sbjct: 294 TAKYPKYAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNED 353 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I +RI D+V++ +AG++IP+V+ VVL R HCP C S++ R +GEA Sbjct: 354 YILNKDIRIDDQVLVHKAGEIIPEVIEVVLGSRTNQA-PFEMVKHCPACESNLVRKQGEA 412 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AG 480 C C + L HF SR AMD+D +G+K+++ L ++ Y+ T D++KL Sbjct: 413 DYYCAND-NCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKD 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L L G K + ++NA+E +K T R ++ LGI+ VG A L ++ ++ L Sbjct: 472 QLEELPGFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLAD 531 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A E+L ++PD+G +A V +F+ ESN++++ EL G+ I + PF G Sbjct: 532 AKYEDLIQIPDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMTYKIDVVT---THPFNG 588 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT V+TG+L SR +A + +LG KV+GSVSKKTD V+AG+ AGSKL KA ELGIEV+ Sbjct: 589 KTFVVTGTLDDFSRTEASDIIEKLGGKVSGSVSKKTDYVLAGKEAGSKLTKALELGIEVM 648 Query: 661 DEAEMLRLLG 670 DEA + Sbjct: 649 DEATFKVKIN 658 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 821 bits (2121), Expect = 0.0, Method: Composition-based stats. Identities = 273/676 (40%), Positives = 389/676 (57%), Gaps = 16/676 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +L +R H++ Y+V+D+P I D E+D L EL+ LE+ HP L PDSPTQ VG Sbjct: 43 VRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F+ + H MLSLDN FD + A+ +RV+ + ++ + CELK+DGLA+++ Sbjct: 103 GTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAH--YLCELKIDGLAINL 160 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAG 180 LY +G L A TRGDG TGED+T NVRT+ +P +L G + +PA +E+RGEVF Sbjct: 161 LYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVDE 220 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N G FANPRN+AAGSLRQ DPR+T RPL C+G+G EG E P Sbjct: 221 FAQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFE-PKQQS 279 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + WGL VS + + +EVL + R + +IDGVV+KV+ ++ Q +L Sbjct: 280 ESYAALRAWGLRVSPHTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRRL 339 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +RAPRW++A+K+P ++ T + D++ VGRTG +TP A +EPV VAG V+ ATLHN Sbjct: 340 GATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLHN 399 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV-ERVE 419 AD++ G+ IGD+VVIR+AGDVIP+V+ V+ R RE V PT CP CG+ + + E Sbjct: 400 ADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQKE 459 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 G+ RC C QR+E L R+A D++ +G + + L+ V DLF L Sbjct: 460 GDVDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLNE 519 Query: 480 GKLTGLERM----GPKSAQ--NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L G S ++ LE AK+ R L AL IR VG A LA FG Sbjct: 520 EALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREFG 579 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+ ++ AS EEL VG +A+ V +F + +R ++ + GV E Sbjct: 580 SLDRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRMADE---RDES 636 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I+ G ++V+TGSL SRD+AK ++ G + AGSVSKKT V+ GE+ GSK KA Sbjct: 637 IERHLTGLSIVVTGSLEGFSRDEAKELIMARGGRAAGSVSKKTAFVVVGESPGSKYDKAV 696 Query: 654 ELGIEVIDEAEMLRLL 669 ++ + V+DE LL Sbjct: 697 QMKVPVLDEDGFRVLL 712 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 338/817 (41%), Positives = 454/817 (55%), Gaps = 151/817 (18%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 Q + L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQRVG Sbjct: 26 AAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEE---------SFLAFNKRVQDRLKNNEKVTWCCEL 114 PLA F+++RHEVPMLSL N F + AF++RV+D L + E Sbjct: 86 GEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNP-EYVIEP 144 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K DGLA+S+LY +GVLV AATRGDGTTGED+T N++T+ IPL+LHGEN P +EVRGEV Sbjct: 145 KFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEV 204 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 + +A F +N+ G K FANPRNAAAGSLRQLD RITA+R L FF Y V + G Sbjct: 205 LMLKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGF 264 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + + H+ L F+ G + + C ++ +EVLAFY +++ RP L ++IDG+V+KVNS Sbjct: 265 VAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNS 324 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 LAQQ +LGF++RAPRWAVA KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V GV V Sbjct: 325 LAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTV 384 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT-------------- 399 +NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP Sbjct: 385 TNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQD 444 Query: 400 ------------------REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLK 441 + PTHCP+C S++ER EGEAVARC+GG++C AQR + L Sbjct: 445 DLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLI 504 Query: 442 HFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS--------- 492 HF SR+AMD+DG+G+K I+QLV ++ V ADL++L L ++ K+ Sbjct: 505 HFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPS 564 Query: 493 ------------------AQNVVNALEKAKETTFARFLYALGIREVGEA----------- 523 A+N++ +E +K ARFL+ALGIR VGE Sbjct: 565 EGSSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAFGT 624 Query: 524 ---------------------TAAGLAAYFGT------LEALEAASIE------------ 544 A +A +F ++ L AA + Sbjct: 625 LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPPAR 684 Query: 545 ------ELQKVPD--VGIVVASHVHN---------------------FFAEESNRNVISE 575 + ++P + A + + +E N ++ Sbjct: 685 HAEPQRWIARLPGFKISENKAQALWELAGKNIEGLQTDKALPTDWQAWRSEPQNAALLEN 744 Query: 576 LLAEGVHWPAP--IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 L P+ ++ I+ AGKT VLTG+L + RD A++ + G KV+GSVS Sbjct: 745 LKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVSGSVS 804 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KKTD V+AGEAAGSKL KA LG+ V+ EAE+L LLG Sbjct: 805 KKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG 841 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 275/681 (40%), Positives = 398/681 (58%), Gaps = 18/681 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ LR + H Y Y+V+ PEI D +YD ++ +L LE + PEL T DSP+QR Sbjct: 4 KQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSPSQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN--EKVTWCCELKLDGL 119 VG F + H PMLSL N + E F RV L + + ELK DG+ Sbjct: 64 VGGGITKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEHRDSPEFVAELKFDGV 123 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR---------LEV 170 AVS+LY +G+LV ATRGDG+ G+DIT N+RTIR++PL+L + +EV Sbjct: 124 AVSLLYRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGREIEV 183 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGEVF+ + F +NE + FANPRNA AG+L+ D ++R + F Y + Sbjct: 184 RGEVFMTKTDFAVLNEGRPE--EERFANPRNATAGTLKLQDSGEVSRRKMVFVAYYL--K 239 Query: 231 EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPT-LGFDIDGVVI 289 E +H RL ++ G +C + +++ + ++ R T L ++IDG+V+ Sbjct: 240 ESSAEIISHAERLELLERLGFYTGGEHRVCRTLKDIREYIDGWQKKRLTGLPYEIDGIVL 299 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 K+N+ A +++LG +++PRWA+A+KFPA+ T +R + FQVGR G ITPVA LEPV +A Sbjct: 300 KLNNTALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPVRLA 359 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G VS +TLHN +E+ERL +R+ D VVI ++G++IP+V++VV +R T VV P CP Sbjct: 360 GTTVSRSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVVEEKRRPGTLPVVVPESCP 419 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CG+ + + E C C AQ K ++HF SR AMD++G+G I++QLV V Sbjct: 420 SCGTPLVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLVSSGMVV 479 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 DL++LT + L+R KSA N+VNA+ K++ + R L+ALGIR VG ATA LA Sbjct: 480 DAGDLYRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGIRHVGIATARELA 539 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 + TL+ L AS+E L V DVG V+A VH FF + S +I +L GV A Sbjct: 540 GAYPTLDMLCKASVEALSDVTDVGPVIAESVHAFFRKPSATAMIEKLREAGVRLEAEKTK 599 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 ++ F G V+ TG+L + +RD+A + E G K SVSK T+LV+ G+ GSKL Sbjct: 600 KPVNLN--FDGMKVIFTGALERYTRDEAAGLVRERGGKTVASVSKNTNLVVYGKEPGSKL 657 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA++LG+ VI E+E +LG Sbjct: 658 EKARKLGVRVITESEFEEMLG 678 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 272/673 (40%), Positives = 408/673 (60%), Gaps = 12/673 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +LR L + Y Y+V+D P + DA YD L EL++LE +HPELIT DSPTQRVG Sbjct: 6 LRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVG 65 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN-NEKVTWCCELKLDGLAVS 122 P+A F ++ H MLSL++VF E A+ RV+ +EKV + E+K+DGLA S Sbjct: 66 GVPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMDGLACS 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN-----IPARLEVRGEVFLP 177 ++YENG LV A TRGDG GED+TSNVRTI ++PL L + EVRGE+ + Sbjct: 126 LIYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRGEIVMF 185 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FE +N + G K +ANPRN AAG++RQLDPR+ A+R L F Y + + E+P Sbjct: 186 KKDFELLNAQLEQEGKKTYANPRNLAAGTIRQLDPRLVAQRKLYFLAYDLLRDDPAEVP- 244 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T ++ G + + +S +E++ F E+ R L ++ DG+VIK+N A Sbjct: 245 TWEMAYRIVRELGFRSNRDAKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKLNDRALY 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG V + PR A+A+K+PA++ T ++D+ +GRTGA TPVA LEPV +AG V AT Sbjct: 305 RALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGSTVQMAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE++R G+ IGD VV+++AGD+IP+V++ + R + P +CP C +D+ R Sbjct: 365 LHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPECETDLVR 424 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 EGEAV RC + C A+ S++HF S+ A+D+DGMG+K + L++ + ADL+ L Sbjct: 425 PEGEAVWRCPNPI-CPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAADLYVL 483 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 ++ LER SA +++A+ K A+FL+ALGIR VG TA + A+FG+L A Sbjct: 484 KKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHFGSLTA 543 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A+I++L +V VG VVA + +F + ++ ++ + GV P + P Sbjct: 544 IRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQALLDKFEKYGVQ---PQDVKQAPTKGP 600 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA-AGSKLAKAQELG 656 AG V+TGSL + R++A ++ LG +V K TD ++AG+ GSKLAKA++ G Sbjct: 601 LAGIHFVITGSLHSLDREEAADKIRALGGIFQTAVGKNTDYLVAGDNVGGSKLAKAEKFG 660 Query: 657 IEVIDEAEMLRLL 669 ++IDE ++ ++ Sbjct: 661 TKIIDEQKLRDMI 673 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 285/712 (40%), Positives = 390/712 (54%), Gaps = 47/712 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ L +R H + Y+ DAP I DAE+D L R L +E HPEL+ DSPTQ V Sbjct: 50 AVREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQEV 109 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR----VQDRLKNNEKVTWCCELKLDG 118 G AAF+ + H M SL++VF E ++ + V W ELK+DG Sbjct: 110 GGEVSAAFAAVEHLQRMYSLEDVFSLEELESWIAKAEASVAKLGNGTAGPAWLTELKIDG 169 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LAV++LY +G LV AATRGDG TGEDIT NV TI+ IP +L G N PA +EVRGEVF+P Sbjct: 170 LAVNLLYRDGKLVRAATRGDGYTGEDITHNVLTIKEIPQQLTGGNYPAEMEVRGEVFIPS 229 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F + NE G ANPRNAAAGSLRQ DP TAKRPL + +G+G EG + Sbjct: 230 KAFAEYNEALIEAGKAPLANPRNAAAGSLRQKDPAETAKRPLRMYVHGIGAREGLR-TVS 288 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 Q +WGLP S + S +++L F + + R +L +IDG+V+KV+ A Q Sbjct: 289 QSDTYRQLAEWGLPTSPYFEVLGSLKDILDFIKRYGDKRHSLTHEIDGIVVKVDDFATQR 348 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG+ +R PRWAVA+K+P +E T + D+ VGRTG +TP +EPV VAG V ATL Sbjct: 349 ALGYTSRVPRWAVAYKYPPEEVHTKLLDIAVNVGRTGRVTPFGIMEPVKVAGSTVGMATL 408 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE---VVFPTHCPVCGSDV 415 HN D ++ G++IGD VV+R+AGDVIP++V VL+ R + V PT CP CG+ + Sbjct: 409 HNQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRDQQDPPVRDFVMPTECPACGTPL 468 Query: 416 ER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK-----EYVH 469 EG+ RC C AQ +E + H SR A D++ +G + L + + Sbjct: 469 APGKEGDVDIRCPNSRSCPAQLRERVFHVASRGAFDIEALGWEAAIALTQPAEPVTPPLT 528 Query: 470 TPADLFKLTAGKLTGLERMGPK------------------------------SAQNVVNA 499 + A+LF+LT L + K + + + Sbjct: 529 SEANLFRLTREDLADVRIRREKRSKGVATGEFELVPYFYTKGTAKSPSKPTATTEKLFTE 588 Query: 500 LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASH 559 LEKAK R L AL IR VG + LA FG+++A+ AS EEL V VG V+A+ Sbjct: 589 LEKAKSQPLWRVLVALSIRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVIAAA 648 Query: 560 VHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKA 619 + +FAE+ +R ++ +GV E G TVV+TGSL SRD+AK Sbjct: 649 LKEWFAEDWHREIVDTWAEDGVRMEDE---QDESTPRTLEGLTVVVTGSLEGFSRDEAKE 705 Query: 620 RLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 ++ G K +GSVSK T V+AGE AG+KL KA++LG+ V+DE LL + Sbjct: 706 AILIRGGKASGSVSKNTSYVVAGENAGTKLDKAEQLGVPVLDEDGFRALLAN 757 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 336/590 (56%), Positives = 426/590 (72%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 Q LR L Y Y+V D P +PDAEYDR+ R L++LE ++P+L+T DSPTQRVG P Sbjct: 10 QAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVGDVP 69 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 L AF Q++HEVPMLSLDN FD+E AF+KR+++RL +E + + E KLDGLAVS+LYE Sbjct: 70 LDAFEQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGLAVSLLYE 129 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 NG LV AATRGDG TGE+IT N RTIR++PLKL G ++P RLEVRGEV +P AGFE++N Sbjct: 130 NGELVRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHAGFEELNA 189 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + G K+FANPRNAAAGSLRQLD RITA RPL F+ Y + LEG E P TH L Sbjct: 190 RQQEAGLKLFANPRNAAAGSLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTHSAMLDAL 249 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + WGL V+ + +C E +L FY + E R L +DIDGVV KVN Q+ LGFV+RA Sbjct: 250 RDWGLRVNPEIRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQDDLGFVSRA 309 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PRWA+A KFPAQE++T + V++QVGRTGA+TPVARLEPVHV GV+VSNATLHN DEI+R Sbjct: 310 PRWAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATLHNIDEIQR 369 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 L +RIGD VV+ RAGDVIP+VV + RP + + + P+ CPVCGS++ R + VARC Sbjct: 370 LDIRIGDTVVVYRAGDVIPKVVRALPERRPANAQGIALPSSCPVCGSEILRGHDQVVARC 429 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 TGGLICG QR+E++KHF SRRAMD+DG+GDK++D LV++E + T ADL++L A ++ GLE Sbjct: 430 TGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLKAEQVAGLE 489 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 RMG KSA N++ ALE +K RFL+ALGI ++GE TA LA FG L+++ A + L Sbjct: 490 RMGEKSADNLIAALEASKTVGLGRFLFALGILQIGEETAKNLADCFGDLDSIRHAPLLLL 549 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 VPDVG+ VA + FFAE N VI LLA+GV A V +A + S Sbjct: 550 LAVPDVGLEVAKAIGAFFAESDNEAVIDGLLAQGVSPQASGVPSAAFVKS 599 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 92/173 (53%), Gaps = 8/173 (4%) Query: 504 KETTFARFLY-----ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP-DVGIVVA 557 K T A+ L + + +G+ + L ++F T+ L AA+ E P V V Sbjct: 598 KSLTLAQLLKSAKRLGMNLEGIGDKSLDILGSHFRTVTELSAAAAEGAGAEPKGVRSGVM 657 Query: 558 SHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDA 617 + + AE R + + + A E P G+T VLTG+L Q +R+ A Sbjct: 658 TQLAKALAENDWRGRLQDAEKKVADMAARAPQEME--SQPLEGQTWVLTGTLEQFTRNQA 715 Query: 618 KARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 K L +LGAKVAGSVSK T +V+AG +AGSKLAKA+ LGIEV DEA +L LL Sbjct: 716 KQALQQLGAKVAGSVSKNTRMVVAGASAGSKLAKAESLGIEVCDEAALLSLLN 768 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 267/664 (40%), Positives = 402/664 (60%), Gaps = 4/664 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ +L + HH LY++ P I D E+D L+++L E+E HPE IT SP+QRV Sbjct: 4 QKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNE 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 + + F + H PMLSL N + +E F KR+Q L +V + ELK+DG+A++ + Sbjct: 64 SLTSGFKTVAHRTPMLSLANTYSKEEIEDFIKRLQK-LVGKRQVEFSVELKMDGIAITAI 122 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G+ TRG+G G+DIT+N+R I +PL+L GEN+P LE+RGEVF+P+ F ++ Sbjct: 123 YEQGIFKRGITRGNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQL 182 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE + G ++ANPRNAAAGSL+ LDP++ A+R L YG+ + Sbjct: 183 NEQKLQDGEVLWANPRNAAAGSLKLLDPKMVAERRLAVVFYGLAEDSSASIKK-QAEVPS 241 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 F+ GLP + C++ E++ F ++ R L +DIDG+VIK+N Q++LG Sbjct: 242 FFRSIGLPALEHHAYCQNIEQIWKFAEEIRSLRTILPYDIDGIVIKLNDFKDQKRLGVTG 301 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 ++PRWA+A+KF A++ T + D+ Q+GRTG +TPVA LEP+ ++G ++ A+L+N +E+ Sbjct: 302 KSPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEPIFLSGSTIARASLYNQEEV 361 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R +RIGD V I + GDVIP+V+NV LS+RP ++ P +CP CG+ V + GE Sbjct: 362 QRKDIRIGDLVTIEKGGDVIPKVLNVELSQRPLHSQPWQMPLYCPSCGTQVINIIGEVAV 421 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC C Q+ L +FV ++AMD+ MG+KI+ QL +K ++H P+D+F LT G+++ Sbjct: 422 RCPNEDSCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQKGFIHLPSDIFALTEGQISQ 481 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L K+ QN++ ++E++K + RF+ AL I+ +G TA LAA GT+E L + E Sbjct: 482 LTNFKTKAIQNLMRSIEESKHVSLERFIMALEIKYIGIGTAELLAARAGTIETLMQLNEE 541 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L K+ VG VA V F +R + LL GV + V + F GK V Sbjct: 542 DLIKIEGVGGKVAQAVVEHFQNPKHRQEVYRLLELGVCPQSKTVQIF--TNHAFQGKIFV 599 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTGSL +R A + + E G KV+ SVS+KT+ V+AG GSKL KA+ LGI V++E E Sbjct: 600 LTGSLEHYTRQSAASLIKERGGKVSDSVSRKTNYVVAGAEPGSKLDKARTLGIPVLNEKE 659 Query: 665 MLRL 668 + L Sbjct: 660 FISL 663 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 815 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 267/673 (39%), Positives = 395/673 (58%), Gaps = 13/673 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + ++ +L L Y+ D P + D YD L LE +P L PDSPTQ Sbjct: 15 FTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYPSLAMPDSPTQ 74 Query: 61 RVGAAP-----LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELK 115 V A ++ H VPMLSL +VF + L ++ + +K + ELK Sbjct: 75 HVAAGNQTKNDSRGLQKVVHPVPMLSLGDVFSIQELLDWDLVTTKNAGSQQK--YNLELK 132 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DGLA+S+ YENG L+ A+TRGDG+ GE++T NV+TI IP L N P +EVRGE++ Sbjct: 133 IDGLAISLRYENGRLIQASTRGDGSIGENVTDNVKTITEIPKVL---NEPLTIEVRGEIY 189 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +N+ G +FANPRNAAAGSLRQLDP+ITAKR L+ F Y + + Sbjct: 190 MRKEAFADLNQQRDEEGKTIFANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQNDVLGV 249 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 +T L +F++ G PV+ + + EV + + R L + IDGVV+KVN L Sbjct: 250 -NTQSDVLERFRQLGFPVNSSNKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKVNDLD 308 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 + +LG + PRW++A+KFP +E +T VRD+ + VGRTG +TP A ++PV +AG V Sbjct: 309 VENELGNTVKIPRWSIAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAGTKVKR 368 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 A+LHN D ++ +RIGD V + +AGD+IP+V V+L +RP D + P +CP C S + Sbjct: 369 ASLHNPDYLQEKDVRIGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPSCKSKL 428 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 V+GE RC C AQ KE L HF SR AM++DG+G ++++QL+ K + +DL+ Sbjct: 429 VHVQGEVALRCINPE-CPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIRKISDLY 487 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 LT +LT L++ S++N++ A++++++ + R + ALGIR VG A LAA+F L Sbjct: 488 ALTESQLTTLDKFADLSSKNLIQAIDRSRQNSVERLITALGIRGVGAKAAKVLAAHFKNL 547 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 L+ A EE+ ++ VG V+A + +F ES ++I+EL V++ +E + Sbjct: 548 RNLQNAGAEEIAEIDGVGQVMADAIRQYFNSESVASLINELENFQVNFDYLTTSTVDEKN 607 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 F K +VLTG L +R +A L E GA V+ SVS KTDL+IAG GSKL +A +L Sbjct: 608 Y-FFNKRIVLTGKLIHWTRPQMQAWLEEHGANVSSSVSSKTDLLIAGSDVGSKLERANKL 666 Query: 656 GIEVIDEAEMLRL 668 GI+VI+E + + L Sbjct: 667 GIKVINEQDFINL 679 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 279/668 (41%), Positives = 389/668 (58%), Gaps = 14/668 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES ++ LR+ ++ Y+V D P + D E+D L+ ELR LE HPEL +PDSPT+R Sbjct: 3 ESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTER 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P ++F+ +RH PMLSLDNVFD + A+ +R + L ++ + + ELK+DGLA+ Sbjct: 63 VGAPPGSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFF--ELKIDGLAL 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y +G L AATRGDG GED+T+N + AIP +L G P +EVRGE+FLP++ F Sbjct: 121 SLTYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGPGLVEVRGELFLPRSAF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE R FANPRNAAAGSLRQ DP +T R L+FF Y + E G D H Sbjct: 181 RALNERVER----PFANPRNAAAGSLRQKDPALTRDRGLSFFAYQL---EEGPSFDYHHE 233 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G V T +E+ + E R L +DIDG VIKV+ L + +LG Sbjct: 234 ALQWLGEVGFQVEAHATPV-GLDELADKLAWLAEARDGLDYDIDGAVIKVDRLEDRVRLG 292 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 APRW +A+KFPA+E+ T + +E VG++G +TP A L+PV V G VS ATLHNA Sbjct: 293 TTTHAPRWMIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNA 352 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+I RL +R+GD V++RRAG+VIP+VV VL RP+D VFPT CPVC + + R GE Sbjct: 353 DQIARLDVRVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGE 412 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C Q + L HF SR AMD+DG+G++ QLVE V P DL++LT Sbjct: 413 VDWRCPN-RRCPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDD 471 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L + +S + + +E ++ R ++AL I VG+ +A G+L L Sbjct: 472 LARLPGVRHRSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTV 531 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + +EL +V +G VVA+ V F + R ++ +L GV A P G Sbjct: 532 TEDELCRVEGIGPVVAASVVAFRDSDLGREILDKLERAGVGASAD---RPRAAGGPLEGL 588 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 + VLTG++ + R + A + E G +V SVS++T V+AG + GSKL +A+ GI VID Sbjct: 589 SFVLTGTVPGIGRAELAALIEEHGGQVRTSVSQRTSYVVAGASPGSKLDEARARGIPVID 648 Query: 662 EAEMLRLL 669 + L+ Sbjct: 649 LDGLRELI 656 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 321/778 (41%), Positives = 435/778 (55%), Gaps = 110/778 (14%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +Q++ L L + + Y+ +DAP +PD+EYDRL REL LET++P+ P+SPT R Sbjct: 21 QQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTNR 80 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDE----------ESFLAFNKRVQDRLKNNEKVTWC 111 VG A L F + H VPMLSL N F AF++RV L + Sbjct: 81 VGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAFDERVCKDL-GAAHTEYI 139 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY+NG+L+ AATRGDGTTGED+T N++T+R IPL+LHG+ +P +EVR Sbjct: 140 IEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDLIEVR 199 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQL+ ITA+R L FF YG+ L Sbjct: 200 GEVLMLKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGYGIARLS 259 Query: 232 GG-ELPDTHLGRLLQFKKWGLPVSD-RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 P+ H + + G ++ +C + +EVL FY + + RP L ++IDG+V+ Sbjct: 260 TAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYEIDGMVV 319 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN L QQ+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTG+ITPVARL+PV V Sbjct: 320 KVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARLKPVFVG 379 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP------------E 397 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV VVL RP Sbjct: 380 GVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLLGERQEP 439 Query: 398 DTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GDK Sbjct: 440 QHPAFRLPETCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMDIVGLGDK 499 Query: 458 IIDQLVEKEYVHTPADLFKLTAGKLTGLERM---GPKSAQNVVNALEKAKETTFARFLYA 514 I+ LVE++ +H+ AD+++L KL ++ K N+++A+ +++ ARFL+A Sbjct: 500 QIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPPLARFLFA 559 Query: 515 LGIREVG--------------------------------EATAAGLAAYF------GTLE 536 LGIR VG A +A +F L+ Sbjct: 560 LGIRHVGESTAKQLAAAFGDWDTVRRAPEPVLACLPDIGSVVAHSIAHFFRLPEQQKLLD 619 Query: 537 AL-----------------EAASIEELQKVPDV--------------GIVVASHVHN--- 562 L A L ++PD G +A + + Sbjct: 620 DLLHFVSPQEAAIATLVLEYATPARWLARLPDYKISEKRAQELWDLAGGSIAQLLADDAL 679 Query: 563 ------FFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF----AGKTVVLTGSLSQM 612 + + N ++ ++ A P + + GK VLTG+L + Sbjct: 680 PSDWQAWRRQPENARLLRDIDAFFAQLPEHALPADNAVSGSLKNEITGKIFVLTGTLPTL 739 Query: 613 SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 RD A A + G KV+GSVSKKTD V+AG AGSKL KAQ LGI V+ E E+L +LG Sbjct: 740 KRDQAAALIEAAGGKVSGSVSKKTDFVVAGAEAGSKLEKAQSLGITVLSEEELLGMLG 797 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 275/736 (37%), Positives = 407/736 (55%), Gaps = 76/736 (10%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q++ LR L H+ LY+ PEI D +YDRL REL LE++HP+L DSPT R+G Sbjct: 10 QRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGDSPTLRIGDD 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN--------------------- 104 + F+++RH ML+LDN +DE F+ RV L Sbjct: 70 RVEGFTRVRHRQAMLTLDNTYDEGELREFHVRVVKALSKENPPPPPPPPPSPTTTATKPT 129 Query: 105 ----------------------NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTG 142 + + + E K+DG+++S+ YE+G L A TRGDGT G Sbjct: 130 EQLDLFAPVPSPPPPPLPPATFDANIAYIVEPKIDGVSISLTYEHGKLTQAITRGDGTEG 189 Query: 143 EDITSNVRTIRAIPLKL-----HGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 +D+T+NV+TI +P L +PA +E+RGE+FL + F +IN+ G +A Sbjct: 190 DDVTANVKTIHGLPHTLCHAPGTTTPLPALIEIRGEIFLREEEFRRINQQQEEAGDAPYA 249 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE------------LPDTHLGRLLQ 245 NPRN AAG+L+QLDP + A R L YG+G E D+ Q Sbjct: 250 NPRNLAAGTLKQLDPTLVASRRLEIVLYGLGACEPAVPPPPPSAPTDALGFDSQTTYQRQ 309 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF--- 302 WGLP +++ + V +++ R T + DG V+K++ AQQ+ LG+ Sbjct: 310 LIAWGLPTVEKIWSVRGIDAVWTAIQELDRLRRTFAYATDGAVVKLDLFAQQKILGYRGA 369 Query: 303 --VARA-------PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 RA PRWA AFKFP T +R + QVGRTG +TPVA L+PV +AG V Sbjct: 370 DATGRAQEARKLSPRWACAFKFPPDRAKTRLRAITIQVGRTGVLTPVAELDPVLLAGSTV 429 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 ATLHNADEI R +RI D V+I +AG++IP V+NV++ +RP D+ FP +CP C + Sbjct: 430 RRATLHNADEIARKDVRINDTVLIEKAGEIIPAVINVIVEKRPPDSIPYAFPQNCPACNT 489 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 R+EGE RC C + + + HFVS+ +D++G+G +I++ L++ + T D Sbjct: 490 PAVRIEGEVAWRCLNPH-CPGKMRRRIAHFVSKACLDIEGLGREIVELLLDHNLIKTIPD 548 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 LF+LT +L L++ G + N++NA+ + R ++ LGI +VG A A LA F Sbjct: 549 LFRLTREQLLPLKKSGETWSGNLINAIAARRTADLWRVIHGLGIPQVGAAAAKNLARAFR 608 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+AL AA++ +L+++PD G A V ++FA+ N+ +I++L G+ AP A Sbjct: 609 SLDALAAATLPDLERLPDFGATTAQAVRDWFADPHNQELIADLQRAGL---APTPPAAAA 665 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + P AGKT+VLTG+L ++R+ A ++ G K++ SVSKKT V+AG AGSKL KAQ Sbjct: 666 TNHPLAGKTIVLTGTLPTLTREQATEKIEAAGGKISTSVSKKTHYVLAGAEAGSKLEKAQ 725 Query: 654 ELGIEVIDEAEMLRLL 669 +LG+ ++DEA L+LL Sbjct: 726 KLGVPILDEAAFLQLL 741 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 291/687 (42%), Positives = 410/687 (59%), Gaps = 19/687 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + L +LR +R H+ LY+V+ EI D EYDRLM L E+E PEL T DSP+Q+ Sbjct: 20 DQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSPSQK 79 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR---LKNNEKVTWCCELKLDG 118 VG P+ F Q+ H VPMLS+DNV+DE L F ++V R + + W E K+DG Sbjct: 80 VGGEPIEGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFKVDG 139 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH----------GENIPARL 168 +A+S++YE G L+ A TRGDG G+D+T N +TI+ +PL L NIP L Sbjct: 140 VALSLIYEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIPRLL 199 Query: 169 EVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG 228 EVRGE ++ F K+ G + F N RNA AGSL+ LDP++ A+R L FF + +G Sbjct: 200 EVRGEAYIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAHSLG 259 Query: 229 VLEGGELP--DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDG 286 ++ E TH L F + GLP S E +A + E TL F++DG Sbjct: 260 AIDEQEATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFEVDG 319 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 +V KVN+LA + +LG +++PRW VA+K+ E T V ++ QVG+TG +TPVA LEPV Sbjct: 320 LVFKVNNLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVLTPVADLEPV 379 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 +AG VS ++LHN DEIERLGL +GD V++ +AG +IP +V V RP +T FP Sbjct: 380 EIAGTTVSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHIVRVEEHLRPTNTAPYRFPE 439 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CP C + VE+ EG RC + C A+ +ESL++F SR+AMD++G+G K+++QLV Sbjct: 440 TCPECSTIVEQDEGGVYIRCPN-INCPARFRESLRYFASRQAMDIEGLGTKLVEQLVSSR 498 Query: 467 YVHTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 V + +DL++L +L LER+G KS +++ LE +++ R L AL IR VG+ T Sbjct: 499 LVQSISDLYRLVDKRAELLELERLGEKSVDSLLAGLEASRQQPLWRLLTALNIRHVGQRT 558 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A LA FG+++ L A +IEEL P+VG V+A VH+FF E +I EL G++ Sbjct: 559 AQILAERFGSMDRLSAQTIEELSATPEVGEVIAQSVHHFFHTEYGSKLIEELKNLGLNLG 618 Query: 585 APIVINA-EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + +GKT V+TG+L M R++ + + G A SVSKKT V+AGE Sbjct: 619 TESEQKQIAATEGVLSGKTFVVTGTLPSMGREEIEELIRLHGGHAASSVSKKTSFVVAGE 678 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AGSKL KAQ LG+ VI+EAE ++L+G Sbjct: 679 NAGSKLTKAQSLGVPVINEAEFMKLIG 705 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 293/728 (40%), Positives = 392/728 (53%), Gaps = 66/728 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++ T+L + H LYH DAP+I DAEYD LMREL +E HP L T DSP+Q Sbjct: 15 FDAARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPSQ 74 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG F+ +RH + SLDN F E A+ +RV + + CELK+DGLA Sbjct: 75 QVGGDVSELFASVRHAERLYSLDNAFSPEELTAWVERVTAEVPGEA---YLCELKIDGLA 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG---ENIPARLEVRGEVFLP 177 V++ YENGVLV ATRGDGTTGEDIT NVRTI +IP KL G +P +E+RGEVF+ Sbjct: 132 VNLTYENGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVEIRGEVFMS 191 Query: 178 QAGFEKINEDARRTGG--------------------KVFANPRNAAAGSLRQLDPRITAK 217 FEK+N D ++ANPRNAAAGSLRQ DP ITA Sbjct: 192 TESFEKLNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQKDPTITAS 251 Query: 218 RPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR 277 R L+ YG G G E P K WGLP S + ++ E V + E R Sbjct: 252 RALSMTVYGFGARRGFE-PTHQSQGYAALKAWGLPTSSYFKVLDTVEGVTEYIEHYGEHR 310 Query: 278 PTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAI 337 + +IDGVVIK++ +A Q +LG RAPRWA+A+K+P +E T +RD++ VGRTG Sbjct: 311 HDIEHEIDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKVSVGRTGRA 370 Query: 338 TPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE 397 TP A LEPV VAG V ATLHN D ++ G+ IGD+V+IR+AGDVIP+V+ V R Sbjct: 371 TPYAVLEPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLGPVEGARTG 430 Query: 398 DTREVVFPTHCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 D E V P++CP CG+++ + EG+ RC C AQ +E L + R +D+DG+G Sbjct: 431 DEHEFVMPSNCPECGTELRQMSEGDIDLRCPNARSCPAQLRERLSYLTGRSCLDIDGLGY 490 Query: 457 KIIDQLVEKEYVHTPA-----DLFKLTAGKL-----------TGLERMGPKS-------- 492 LV+ P DLF LT +L +GL + PK+ Sbjct: 491 VACTALVQPLEPKQPPLADEGDLFNLTMEQLLPIKSLVLDPDSGLPKKDPKTGKDKEVTY 550 Query: 493 -----------AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 A ++ +E AK+ R + L IR VG A LA FG L+A+ A Sbjct: 551 FATQDGAPKAGATKMLEGIEAAKQQELWRIINGLSIRHVGPVAARALATEFGDLDAIRDA 610 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 E L V VG +A+ V +FAE+ + ++ + A GV + E + AG Sbjct: 611 DEERLAAVDGVGPTIATAVKQWFAEDWHVEILEKWRAAGVRFVEE---RPEAGERHLAGL 667 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TGSL +RD A + G KV+GSVSKKT V+ G++ GSK KA +LG+ ++D Sbjct: 668 TVVITGSLEGWTRDGAAEAVRVRGGKVSGSVSKKTSFVVVGDSPGSKYDKAVKLGVPILD 727 Query: 662 EAEMLRLL 669 LL Sbjct: 728 TEGFATLL 735 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 296/669 (44%), Positives = 416/669 (62%), Gaps = 12/669 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 IE+ LR L Y Y+V+DAPE+ DA YD+ REL +LE+++PEL++PDSPT+RV Sbjct: 8 EIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRV 67 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P +AF + H VPM SL+N F + + +R+ + + + CELK+DG A + Sbjct: 68 GERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIG--PGLEFICELKIDGSATA 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YE+GVLV ATRGDG GE+IT N+RTIRAIPLKL G +PA LEVRGE F+P+ FE Sbjct: 126 LSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEFE 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +IN++ + G K+FANPRNA AG+LRQLD R+ A R L FF Y ++ Sbjct: 186 RINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGR----AESQWEA 241 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + + G V+ +LC EV F E R L +D DGVV+KVN+ Q ++GF Sbjct: 242 LAELESHGFRVNPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVGF 301 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ PRWA+AFK+PA+E+ T V + QVGRTGA+TPVA L+PV VAG VS ATLHN D Sbjct: 302 TSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQD 361 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 IE L +R+GD V+IR+AG++IP+VV V+ RP + VFP CP CG+ V R GEA Sbjct: 362 RIESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGEA 421 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC C A + L H+ + A+++DG+GDK+I +LV VHT ADL++L+A +L Sbjct: 422 AVRCPNPR-CPALIRGKLGHWCA--ALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQL 478 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 GLER+G +SA +V L+++ ++R LY LG+R +G + + LA F + +AL A Sbjct: 479 AGLERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARAD 538 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 + + + G +A V +FA+ NR ++ L A G+ S AG T Sbjct: 539 LAAIASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQLAG---GGRAAQSSALAGLT 595 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V+TG+L +SR++ A + G KV SVS +T V+AGE AGSKLA+AQ+L + V+DE Sbjct: 596 FVITGTLPTLSREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLKVAVLDE 655 Query: 663 AEMLRLLGS 671 ++ L+ + Sbjct: 656 EQLRALIET 664 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 283/670 (42%), Positives = 417/670 (62%), Gaps = 10/670 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +Q++ +L T+ +H LY+ D PEI D EYD+L REL LE + PEL DSPT Sbjct: 3 IEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTN 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG L F + H + M SL NV +EE FL F+ R+Q L N K+ + E K DGLA Sbjct: 63 KVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKEL-NQSKIKYTVENKFDGLA 121 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + ++YE G L A+TRGDG GE++T+NV+ + +P + +L VRGE + + Sbjct: 122 LELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKE---KKKLIVRGEALITKKD 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N++ FAN RNAA+G LRQLD + KR L FF Y + + +L + Sbjct: 179 FEALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTN-EY 237 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + G V + V A++VL Y+ ++E R + ++IDG+VIKV+ + QE+L Sbjct: 238 KSMEFLSELGFTV-EGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKL 296 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF++RAPR+AVAFKF +E+ T ++++E QVGRTGA+TPVA+LEPV V GV VSN TLHN Sbjct: 297 GFLSRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHN 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 +EI+ +RIGD VV+ R+GDVIP++ VVL +R D++ FP CPVCG D +G Sbjct: 357 PNEIKSKDIRIGDTVVVIRSGDVIPKITRVVLEKRTADSKPFEFPKKCPVCGGDTAVTDG 416 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + + RC C ++ +++FVS+ AM+++ +G + I + V TPADL+K+T Sbjct: 417 DVIVRCINEE-CPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRD 475 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L ERMG K A ++ ++E +K TT RF+YALGIR+VGE TA LA YF ++E + Sbjct: 476 DLFKFERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKK 535 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+I++LQ + +G + A +++F E +I +LLA GV+ P+ ++SP G Sbjct: 536 ATIDDLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVN---PVFEKVVTVESPLTG 592 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 K VV+TGS+ +R+ AK LGA V +VSK T+++I GE AGSKL KAQ+LG+E++ Sbjct: 593 KNVVITGSIEGFTRNSAKEAAERLGATVQSAVSKNTNILIVGEKAGSKLKKAQDLGVEIM 652 Query: 661 DEAEMLRLLG 670 + E ++L Sbjct: 653 EADEFIKLAN 662 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 274/669 (40%), Positives = 404/669 (60%), Gaps = 5/669 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ ELR L HH YLY+V AP I D E+D L++EL ++E +P L+TPDSPTQRVG Sbjct: 10 AERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPTQRVGG 69 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 P+ F Q+ H+ PMLS+DN +DE F+ V+ + V + ELK+DG+++S+ Sbjct: 70 QPIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKIDGVSMSLT 129 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENGVL AATRG GT G+D+T N++TI AIPLKL N PA EVRGEV++ + +I Sbjct: 130 YENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMTRGELARI 189 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + + + + N RN AG+L+ DPR A R L FF YG G + GG T L Sbjct: 190 NAEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDI-GGLAITTQAAMLA 248 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + K++G PV+ +C S +EV+A+ + E R L +D DG+V+KVN AQ+E++G+ A Sbjct: 249 KLKEFGFPVNPHERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQRERIGYTA 308 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE-PVHVAGVLVSNATLHNADE 363 + P+WA A+KF A++ T + V F +G+ G +TPVA + PV +AG V++A++HNA Sbjct: 309 KVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTHASMHNASW 368 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 + +RIGD VV+ + G++IPQVV+V+ ++R + + +P CP CG VE+ E Sbjct: 369 VAERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPVEKEESATS 428 Query: 424 AR--CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 C +C AQ + L+ F + M++DG+G ++ QLV+ E V + ADL++LT + Sbjct: 429 YNFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVADLYRLTKAQ 488 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LE K AQN+++ + +K AR L L I VGEA + L F ++ + AA Sbjct: 489 LLALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMSDLLVEEFPDIDLIIAA 548 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + E+L +V G A V FF ES R +I++L G+ A P AGK Sbjct: 549 APEDLARVKGFGPKRAQFVRAFFDSESGRQLIADLKQFGIKMTHDKKA-APTGGLPLAGK 607 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TG+L R + + + GAK +GSVSKKTD V+ G+ GSK KA+ELG+++I+ Sbjct: 608 TVVVTGTLVNYDRIGIEQAIKDAGAKASGSVSKKTDFVLVGDKPGSKADKAKELGVKIIN 667 Query: 662 EAEMLRLLG 670 EAE +++G Sbjct: 668 EAEFRQMIG 676 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 331/729 (45%), Positives = 424/729 (58%), Gaps = 66/729 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +L L + H+ LYH DAPEI D EYD L+R ELE P L+ DSP+++V Sbjct: 12 EAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSPSRKV 71 Query: 63 GAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGL 119 G A A+ S++ HEV M+SLDN F +E F RV+ L +E + + E K+DGL Sbjct: 72 GHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDKIDGL 131 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE----------------- 162 + S+ YENG LV AATRGDG GED+T NV I IP +L Sbjct: 132 SCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGAGGGPLDDSGSA 191 Query: 163 -------------NIPARLEVRGEVFLPQAGFEKINED-----ARRTGGK---------- 194 N PA E+RGEV++ A F +N K Sbjct: 192 PTPDPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADEKDNAFDTAKVR 251 Query: 195 VFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVS 254 FANPRNAAAGSLRQ D +TA RPL F+ +G G +EG +T + + Q WG+PVS Sbjct: 252 QFANPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVVEQIAAWGVPVS 311 Query: 255 DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFK 314 CE+ EE+LA Y + R L ++IDGVV KV+ L Q++LGFVA+APRWA+A K Sbjct: 312 PLFRRCETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRWAIARK 371 Query: 315 FPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDK 374 FPA++ T + +++ QVGRTG +TPV RL PV V GV V+N TLHN DEIERLG+R GD+ Sbjct: 372 FPAEQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGVRPGDR 431 Query: 375 VVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGA 434 VV++RAGDVIPQVV + + D+ FP CP CGS+ EG RCTGGLIC A Sbjct: 432 VVVQRAGDVIPQVVRNLTPDEKRDS--FEFPDTCPECGSEAVSEEGGVDVRCTGGLICPA 489 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKLTGLERMGPKS 492 QR E LKHFVSR A+D+DG+G+K IDQ ++ +PAD+F+L ++ LE KS Sbjct: 490 QRTERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEILALEGWMDKS 549 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA------ASIEE- 545 N++ ++E +E AR L LGIR VG TA L YF L AL A EE Sbjct: 550 VDNLLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAEKARAGDEEA 609 Query: 546 ---LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 L + +G V + +FF EE NR V +LL+E +P E +DSP AGKT Sbjct: 610 VVALTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSE----VSPPRYEVETLDSPVAGKT 665 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV TG L MSRD+AKA+ LGAK +GSVS KTDL++AG AGSKL KAQ+LGIEVIDE Sbjct: 666 VVFTGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKLKKAQDLGIEVIDE 725 Query: 663 AEMLRLLGS 671 A ++ + Sbjct: 726 AGWAEIVAA 734 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 260/670 (38%), Positives = 388/670 (57%), Gaps = 6/670 (0%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +++ L + +H LY+ PEI D E+D+L+ +L LE + P+L P+SPTQR Sbjct: 4 EQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P F+ + H+ PMLSL N + E + F KR +L + + CELK DG+A+ Sbjct: 64 VGGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPG-ATIEFFCELKFDGVAI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LY+ G L TRGDG G+DIT N + I IP + +++P EVRGE F+ A F Sbjct: 123 SLLYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFEVRGEAFMSLADF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+N D G + ANPRNA AG+L+ L KR L + Y + + +LP TH Sbjct: 183 EKLNRDRLAHGLEPLANPRNATAGTLKTL-KSTGPKRWLDCYMYSLLSTDM-DLP-THEV 239 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + +KW VS C + EEV+A+ E + +L IDGVVIKVN QQ +LG Sbjct: 240 CIQWLEKWCFHVSPTYKKCRTLEEVMAYIEYWESAKNSLPVAIDGVVIKVNDTLQQNKLG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A++PRWA+A+K+ + T + V++QVGRTG ITPVA L+P+ +AG +V ATLHNA Sbjct: 300 LTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVKRATLHNA 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 EI+RL L +GD V I + G++IP++ +S+R D+ V F THCP CG+++ + + Sbjct: 360 GEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLDSEPVKFVTHCPACGTELVKRYEK 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C C Q + LKHFV R+AMD+ +G + I+ L+ + VHTPADL+ L Sbjct: 420 ALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPADLYSLKYQD 479 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LE + +NV++ +E +K+ F R L+ALGIR VGE A + Y+ ++ L A Sbjct: 480 IRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKITQYYTDIDTLSNA 539 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-PFAG 600 ++E+L +P +G +A V N+F N +I L G+ P + S P +G Sbjct: 540 TVEDLIAIPFIGTEIAHSVTNYFENPENLALIDVLKQAGLQLSRPQLATVFATQSLPLSG 599 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEV 659 KT V++G+ R++ K + + G + ++S K + +I GE G K+A+AQ LGI Sbjct: 600 KTFVISGTFQNFEREELKELIKKKGGGILTNISAKLNYLIIGENPGPGKVAQAQALGIST 659 Query: 660 IDEAEMLRLL 669 I+E E+L++L Sbjct: 660 INETEILQML 669 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 278/679 (40%), Positives = 405/679 (59%), Gaps = 17/679 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI--TPDSP 58 I+++ +LR + +H LY+ D P I D EYD LMREL++LE ++PEL+ + +SP Sbjct: 23 FSKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSP 82 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--------KNNEKVTW 110 T+++G FS++RH PMLSL N ++ F+KRV+ + N+E + + Sbjct: 83 TKKIGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNNDENLEY 142 Query: 111 CCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV 170 ELKLDGL++S++YENG LV A TRGDG GED+T N+R I +IP KL P LEV Sbjct: 143 ILELKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKD---PVSLEV 199 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGE+ LP + F +IN++ G VFANPRNAA+G++RQLD I A R L + Y + Sbjct: 200 RGEIILPISNFNRINQEREDDGEDVFANPRNAASGTIRQLDKTIVADRGLDCYLYYLVNA 259 Query: 231 EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 E + +THL + K G + E+ K + R TL ++ DG+VIK Sbjct: 260 ENYGI-NTHLESIEYIKNLGFQTTGVFEKYTDFTELEKSIDKWHDKRKTLDYETDGLVIK 318 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VN+ A E LG+ ++PRWA+A+KFPA++ T + DV FQVGRTG ITPVA LE V+++G Sbjct: 319 VNNFALYETLGYTTKSPRWAIAYKFPAEQVKTKLTDVTFQVGRTGVITPVAELEAVNLSG 378 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPV 410 +V A+LHN DEI R ++IGD V++ +A ++IPQVVNVV +R E+ PT+CPV Sbjct: 379 SVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPTNCPV 438 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 C S++ EG +C L C + K + +FVSR AM++ G+GDKI+++ +E + T Sbjct: 439 CNSELSHEEGLVALKCHNPL-CPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIELGKIKT 497 Query: 471 PADLFKLTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D++ L +L LE+MG KS N++N++E +K F++ LYALGI VG+ A L Sbjct: 498 IVDIYSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPFVGKFNANLL 557 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 F +E L+ SIE L V +G VA V+ F +E+N +I++L G+ + Sbjct: 558 TKTFKNIENLKNQSIENLLAVKGIGDKVAVAVNTFLNDENNWKIITDLQNIGLQFAIDET 617 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 + D+P K + TG L + R+D K ++ G VSK D +IAGE AGSK Sbjct: 618 NLEKIADNPIKDKNFLATGKLQKYKRNDIKDIILSKGGNYLSVVSKNLDFLIAGEKAGSK 677 Query: 649 LAKAQELGIEVIDEAEMLR 667 L KA++LGI V+ E + + Sbjct: 678 LEKAEKLGIRVLTEEDFEK 696 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 336/812 (41%), Positives = 445/812 (54%), Gaps = 154/812 (18%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q++ L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQ Sbjct: 38 MNPTAQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQ 97 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEE---------SFLAFNKRVQDRLKNNEKVTWC 111 RVG PLA F ++RHEVPMLSL N F + AF++RV L N EK + Sbjct: 98 RVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGL-NGEKPEYV 156 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY +GVL AATRGDGTTGED+T NV+T+ IPL+LHGENIP +E+R Sbjct: 157 IEPKFDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIR 216 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQLD RITA+R L FF Y + + Sbjct: 217 GEVLMLKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQ 276 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 GG + + HL L K+ G + D C + +EVLAFY ++++ RPTL ++IDG+V+K Sbjct: 277 GGFIAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVK 336 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VNSLAQQE+LGF++RAPRWA+A KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V G Sbjct: 337 VNSLAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGG 396 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT----------- 399 V V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP Sbjct: 397 VTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQD 456 Query: 400 ----------------REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHF 443 + PTHCP+C S++ER EGEAVARC+GG++C AQR + L HF Sbjct: 457 DLFAETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHF 516 Query: 444 VSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK------------ 491 SR+AMD+DG+G K I+QLV ++ V ADL++L L ++ K Sbjct: 517 ASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASANEEEPSNSE 576 Query: 492 -----------------------SAQNVVNALEKAKETTFARFLYALGIREV-------- 520 A+N++ +E +K ARFL+ALGIR V Sbjct: 577 IEDFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKTL 636 Query: 521 ------------------------GEATAAGLAAYFG----------------------- 533 G A +A +F Sbjct: 637 AQAFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGVAPQSQAV 696 Query: 534 TLEALEAASIEEL-QKVPD--VGIVVASHVHN---------------------FFAEESN 569 T+ L A + ++PD + A + + + N Sbjct: 697 TIPPLRHAEPQRWIARLPDFKISETKALALWELAGQSIEGLQTDKALPADWQTWRNKPQN 756 Query: 570 RNVISELLAEGVHWPAPIVIN--AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAK 627 ++ + + + ++ I+ AGKT VLTG+L + RD A+A + G K Sbjct: 757 ATLLENMKTFFAQTRSNLQDETISDGINEAVAGKTFVLTGTLPTLKRDQAQAMIEAAGGK 816 Query: 628 VAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 V+GSVSKKTD V+AGEAAGSKL KAQ LG+ V Sbjct: 817 VSGSVSKKTDYVVAGEAAGSKLEKAQTLGVAV 848 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 293/698 (41%), Positives = 410/698 (58%), Gaps = 45/698 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +IE ++ EL L Y Y+ +D P + D+EYD L EL +LE ++P+L+ DSPT R Sbjct: 2 NIESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRT 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G L F + RH + SL +VF E + +RV+ + N E + CELK+DGL++S Sbjct: 62 GGVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPE---YICELKIDGLSLS 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG+LV+AATRGDGTTGE+IT NV+ I+ +PLKL + VRGE +LP+ F Sbjct: 119 LYYENGLLVTAATRGDGTTGENITENVKRIKDVPLKLKEA---IDIVVRGEAYLPRQNFA 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N + G FANPRNAAAG+LRQLD +I AKR L F Y DT Sbjct: 176 KLNAERELEGAAPFANPRNAAAGTLRQLDTKIVAKRGLATFLYQ---EASPATNDTQEEV 232 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L F++ G V+ + +E+ F + R L +DIDGVVIKVN+LA+QE+LGF Sbjct: 233 LEYFEELGFQVNPERKFARNLDEIWEFIEEATRLRDELPYDIDGVVIKVNNLAEQEELGF 292 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +APRWA+A+KFPA++ T + V++ VGRTG +TP A + V +A V+ ATLHN D Sbjct: 293 TVKAPRWAIAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVD 352 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE------------------------- 397 I+ +R DKV+I +AGD+IP+V V+L +R Sbjct: 353 YIQEKDIRNHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEK 412 Query: 398 -------DTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD 450 + V PT CP C SD+ E E RC L C AQ +E L HF SR AM+ Sbjct: 413 GLVFSKREDNRVKIPTQCPECDSDLIHFEDEVALRCVNPL-CPAQIREKLIHFASRDAMN 471 Query: 451 VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFAR 510 + G+G +I QL +K+ V ADL++LT L L+++ AQ +V+A+ +++E + + Sbjct: 472 IVGLGPSVISQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAEK 531 Query: 511 FLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 L+ LGIR VG A L F L AL AS EE+ ++P +G V+A+ V ++F + Sbjct: 532 LLFGLGIRHVGGKAAKLLLERFANLRALSQASEEEISEIPSLGGVIATAVVSYFETAGAK 591 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 ++ EL G+++ +N E I +GKTVVLTG L+ + R +AK +L LGA V+G Sbjct: 592 TLLDELENAGLNFAYLGAVNVEGI---LSGKTVVLTGKLTTLKRTEAKEKLEALGANVSG 648 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 SVSKKTDLV+AGE AGSKL KAQ+LGIE+ E ++L L Sbjct: 649 SVSKKTDLVVAGEEAGSKLTKAQDLGIEIWSEQDLLDL 686 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 281/663 (42%), Positives = 405/663 (61%), Gaps = 15/663 (2%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 EL L ++ Y+V D P + DAEYD+L EL +E + P +I+ DSP+QRVG P+ Sbjct: 3 YRELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPV 62 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 + HE+ +LSL N + E F + + D E E K+DG A+ + YE+ Sbjct: 63 TGLENVTHEIKLLSLSNAYSREELEKFVENIWDEYPGAE---IVVEPKIDGAAMVLTYED 119 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G LV ATRGDGTTGED+T N+RTIR++PL++ R+ +RGEVF+P A FE++N Sbjct: 120 GKLVRGATRGDGTTGEDVTHNIRTIRSLPLEIEKS---GRMIIRGEVFMPVASFERLNRL 176 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFK 247 G K+FANPRNAAAG+L+ LD + +R L F YG+ + + HL + K Sbjct: 177 KGEKGEKLFANPRNAAAGTLKLLDSKTAYERGLDVFLYGMDM----GGTEHHLKDMELMK 232 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAP 307 G +++ + E++ A + R +L +DIDG VIKV+S A Q LG ++P Sbjct: 233 SLGFNINEMTRKFNNFEDIWAHVEYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSP 292 Query: 308 RWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERL 367 +WA+A+K+PAQE +T +RDV+FQVGRTG+ITPVA+LEPV +AG +SNATLHN DEI RL Sbjct: 293 KWAIAYKYPAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARL 352 Query: 368 GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCT 427 G++IGDKV IR+ GD+IP+VV ++ ER R++ F ++CPVC S +++ E + +C Sbjct: 353 GIKIGDKVTIRKGGDIIPKVVRPIIDERDGSERDIEFLSNCPVCQSKLQKEETDINRKCI 412 Query: 428 GGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLER 487 + C AQRK L HF SR+AMD+ G G+ ++++LV+ +H AD+++ L + Sbjct: 413 NPV-CPAQRKLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDG 471 Query: 488 MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQ 547 G KS Q + A+E +K+ F + LY LGIR VGE TA LA YFG ++ L +A E L Sbjct: 472 YGEKSVQKLHEAIENSKKKPFDKVLYGLGIRHVGERTAQVLAEYFGDIDKLVSADEEALV 531 Query: 548 KVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 V D+G A + N FA + N+I+ L G+ + A E+ GKT V+TG Sbjct: 532 NVRDIGSETAGAIVNSFANDDLSNIINRLKKSGLCFTAE---KKEKASDVLNGKTFVVTG 588 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 +LS + RD K + G KV +VS K D ++ GE AGSKL KAQ+LG+ +IDE+ + + Sbjct: 589 TLS-LPRDYFKKVIESNGGKVLSAVSGKLDYLLVGENAGSKLEKAQKLGVAIIDESGLTK 647 Query: 668 LLG 670 +L Sbjct: 648 MLK 650 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 316/741 (42%), Positives = 422/741 (56%), Gaps = 81/741 (10%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +++ E + L + Y+ DAP I DAEYD R L E+E + P+L SPT Sbjct: 30 VKAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSPTA 89 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDG 118 +VGAAP F+++ H +PMLSL+N F + AF +RV+ L + + E K+DG Sbjct: 90 QVGAAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKIDG 149 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L++S+ YE G LV AATRGDG GE++T+N RTI IP +L G+ P LE+RGE ++ Sbjct: 150 LSLSLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYMSH 209 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 FEK+N + G+VFANPRNAAAGSLRQLDP +TA RPL FF Y G + T Sbjct: 210 EDFEKLN---QSETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVS-ASFAGT 265 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 + + + + +G + +C S E+L+ + ++E+ R TLG+DIDGVV KVN LA Q Sbjct: 266 QMEAVRRMQAFGFQTNPLTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQA 325 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG + PRWA+A KFPA+ T + ++ QVGRTGA++PVARL PV V GV+VSNATL Sbjct: 326 RLGMRSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATL 385 Query: 359 HNADEIE-----------RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 HN D I +RIGD V + RAGDVIP+V +V L++RP + FPT Sbjct: 386 HNEDYIAGRGADGSEIRGGKDIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTT 445 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CP CGS R EG++V RCTGGLIC AQ E L+HFVSR A D++G+G K++++L + Sbjct: 446 CPECGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGW 505 Query: 468 VHTPADLFKLTA-------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 + PAD+F L +L E G KSA ++ A+EK +E AR L+ALGIR V Sbjct: 506 IAEPADIFTLQDRYGPGQLTQLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGIRHV 565 Query: 521 GEATAAGLAAYFGTLEALE-------------------------------------AASI 543 GE A LA ++G+ EALE A Sbjct: 566 GEVAAQDLARHYGSWEALEIALDTARPAALAHRVAEDAALAEREAARAEGRRARPSEARA 625 Query: 544 EELQKV----------------PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 L +V +G V+A + + FA E R I L+ + + Sbjct: 626 AALAQVDLSPEATAAWTGLIAADGIGPVLAMSLSDAFANERERAAIDRLV----SFLTVL 681 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 A DS AGKT+V TG+L +M+R +AKAR LGA VAGSVS KTDL+IAG AGS Sbjct: 682 PPEARATDSAIAGKTLVFTGTLEKMTRAEAKARAEALGAHVAGSVSAKTDLLIAGPGAGS 741 Query: 648 KLAKAQELGIEVIDEAEMLRL 668 K KA ELGI+VIDE E L + Sbjct: 742 KAKKAAELGIKVIDEDEWLAI 762 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 277/674 (41%), Positives = 408/674 (60%), Gaps = 15/674 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++++LTELR T+R+H Y+ D PEI D EYD+LM L+ +E K+PELIT +SPTQ Sbjct: 10 IQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPTQ 69 Query: 61 RVGAAPLAAFSQ-IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG ++H+VPMLSL +VF +E AF + +Q L E + E K+DGL Sbjct: 70 VVGGQARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQEL---EAPEFVVEEKIDGL 126 Query: 120 AVSILYENGVLVSAATRGDGTT-GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 ++++ YE+G LV A TRGDG GED+T N + I +K ++ E+RGEV++ + Sbjct: 127 SMALRYEDGELVRAITRGDGIVQGEDVTENAKVIHD--VKKKLKDKLPYFEIRGEVYMEK 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F+ +N G K FANPRN AAG+LRQLD RIT +R L+ F + + G T Sbjct: 185 KAFDAVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNLQTARGRTFT-T 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H KK G+ V +C +A+EV + E+R L +DIDG V+K+N+LA +E Sbjct: 244 HTEAYDFMKKQGIKVIHGYKVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLADRE 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG A+ PRWA+A+K+P +E+ T +R +E VGRTG ITP A +P+ + G V ATL Sbjct: 304 KLGATAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I+ L +RIGD V + ++G++IP+V VV +RP T V T CPVCG+ R Sbjct: 364 HNQDFIDNLDVRIGDTVRVYKSGEIIPKVKEVVKEKRPAGTEPFVIGTTCPVCGAPAVRE 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL- 477 + +C C AQ + + +FV R AMD+ G+G+ I +L+E ++ T ADL++L Sbjct: 424 PDTSDIKCKNP-SCPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLYRLG 482 Query: 478 -TAGKLTGLERMG-PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L +G K+ V+ A+E +KE R L LGI +G A L +FG++ Sbjct: 483 GKREELIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIPGIGRTAARELMLHFGSI 542 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +AL AS EE+ +V D+G + A + +F + +++ +++ A GV++ + + +D Sbjct: 543 DALAKASEEEILEVRDMGEISAKAIVQYFNDPASQKILAAFRAAGVNF---TLEDTGLVD 599 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 FAGKT V+TG+L +SR DA A + G +VAGSVSKKTD ++AGEAAGSKL KA +L Sbjct: 600 EKFAGKTFVITGTLPSLSRKDAAALIESHGGRVAGSVSKKTDYLVAGEAAGSKLQKATDL 659 Query: 656 GIEVIDEAEMLRLL 669 GI ++DEA + LL Sbjct: 660 GITILDEAGLQALL 673 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 291/671 (43%), Positives = 408/671 (60%), Gaps = 14/671 (2%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 Q+ LR L +H + Y+ +D PEI D YD L+ ELR LE HPEL+TPDSPTQRVG Sbjct: 7 AQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSPTQRVGG 66 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLA 120 A ++ ++RH MLSL N E+ LA+ +R++ L + + + E K+DGLA Sbjct: 67 AVVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEPKVDGLA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG L+ TRGDG GED+T N+RTI IP ++ G PA LEVRGEV++ A Sbjct: 127 MSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGA--PAWLEVRGEVYMSLAD 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N G F NPRN+AAG++RQLD R+ A+RPL+ +CYG+G EG TH Sbjct: 185 FEALNLRRAEEGRSTFMNPRNSAAGTIRQLDSRLAAERPLSMWCYGIGETEGISFS-THW 243 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + G PV+D + +AE+V+A + +E R +L F+IDGVV+KV+ + Q +L Sbjct: 244 ESLQWLRAHGFPVNDEIRRIRTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVELQRRL 303 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G V R PRWA+A+KFP +T + DV + VG+ G + P A LEPVHV GV V ATLHN Sbjct: 304 GVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKLATLHN 363 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVERV 418 +++ R +R GD V++ RAGDVIPQV++ +ER + P CPVC + + Sbjct: 364 EEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVCDTPTVKG 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EG +C C +R + L+H+VSR AMDVDG+G+K + L+E + TP D ++L+ Sbjct: 424 EG-VFTKCPN-RDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYYRLS 481 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 A +L L+R G SA+N V A+ +KE F R L+ LGI VG T LA F T++AL Sbjct: 482 AEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTIDAL 541 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 AAS EE+ P +G +V +H+ +E R VI +L A GV + P Sbjct: 542 TAASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRMEEDG---PPPGEGPL 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 A K +VLTG+L ++R++A R++ G +V SVS++TD V+AGE AG+KL KA+ L + Sbjct: 599 ADKAIVLTGTLPTLTREEATERILAAGGRVTSSVSRRTDYVVAGERAGTKLEKAERLRVP 658 Query: 659 VIDEAEMLRLL 669 V+DE + LL Sbjct: 659 VLDEDGLEALL 669 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 280/677 (41%), Positives = 381/677 (56%), Gaps = 16/677 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L +R H++ Y+V+DAP I D E+D L+REL+ LE HP L TPDSPTQ+V Sbjct: 45 DARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQQV 104 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ + H MLSLDN FDE+ A+ +RV + + + + CELK+DGLA++ Sbjct: 105 GGTFSTEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVGDAAR--YLCELKVDGLAIN 162 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQA 179 + YE G LV A TRGDG TGED+T N+RT+R +P L G + +P +EVRGEV+ Sbjct: 163 LRYERGRLVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVE 222 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G FANPRN AAGSLRQ DP++TA R L C+G+G G EL + Sbjct: 223 DFLELNAKLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFEL-ERQ 281 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + WGLP S+ + + +EV A E R +IDG+V+KV+ + Q + Sbjct: 282 SDAYAALRAWGLPTSEHTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRR 341 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +RAPRWA+AFK+P +E T + D+ QVGRTG +TP A +EPV VAG V+ ATLH Sbjct: 342 LGSTSRAPRWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLH 401 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE-RV 418 NA E++R G+ IGD++VIR+AGDVIP+V+ V+ RP D RE V P CP CG + Sbjct: 402 NASEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMK 461 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EG+ RC C AQ +E L + SR A+DV+ +G + L E ADLF LT Sbjct: 462 EGDVDIRCPNAEGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDLT 521 Query: 479 AGKLTGLERMGP------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 A L ++ + ++ LE AK R L AL IR VG A LA F Sbjct: 522 AEDLLRVDLFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVEF 581 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 G ++A+ A +L VG +A+ V + + V+ A GV Sbjct: 582 GGVQAILDAEEADLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVRMVDERDTT-- 639 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 I G ++V+TG+L+ SRD+AK ++ G K GSVSKKT VI G+ GSK KA Sbjct: 640 -IRRDLEGLSIVVTGTLADFSRDEAKDSILVRGGKAVGSVSKKTAFVIVGDNPGSKADKA 698 Query: 653 QELGIEVIDEAEMLRLL 669 +L + V+DEA LL Sbjct: 699 AQLKVPVLDEAGFRVLL 715 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 285/691 (41%), Positives = 406/691 (58%), Gaps = 30/691 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +SI ++ +L + H LY+ APEI D +YD+L+ EL +LE HP+L PDSPTQ Sbjct: 10 DSIASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQL 69 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG + Q+ H VPMLS+DN + E A +R++ L+ E V W E K+DG+A Sbjct: 70 VGGDVVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEG-ESVAWTMEYKIDGVAG 128 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH----------GENIPARLEVR 171 SI YENG L A TRG+G G+DIT NVRTIR +P + G N+P LEVR Sbjct: 129 SIRYENGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEVR 188 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GE+++ A +N G + F N RN AG++R LDP+I A R + FFC+G G L Sbjct: 189 GELYMTDADLADLNVRQTDAGHEPFKNTRNVTAGTIRLLDPKIAASRNIRFFCHGSGELV 248 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G D H+ L + G+P++ V E+ E+ L K+E + P L F+IDG+V KV Sbjct: 249 GVRASD-HMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFKV 307 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 +S Q+E+LG +++PRW +A+KF E +T + ++ QVG+TG ITPVA L PV +A Sbjct: 308 DSFEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIADT 367 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VS A+LHNADEIERL +R+GD VV+ +AG +IP+VV V R + + FPTHCP C Sbjct: 368 TVSRASLHNADEIERLDVRVGDTVVVEKAGKIIPKVVRVEKHARTKPLPKFEFPTHCPQC 427 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + R EG RCT C AQ ++ L +F SR MD+DG+G++++D L++KE V Sbjct: 428 DEVLTRDEGGVYIRCTNP-ACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVENY 486 Query: 472 ADLFKLTAGKLTGLE---------------RMGPKSAQNVVNALEKAKETTFARFLYALG 516 ADL++L +L L + G K+A+++V + +++ AR L ++ Sbjct: 487 ADLYRLNVDELAELTWPRLRKGKGDEMIEVQFGRKNAESLVAGINESRTRGLARVLSSIS 546 Query: 517 IREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 IR +G A + A F L+ L +A E+L + ++G +A + F ES +S+L Sbjct: 547 IRHIGPRVAKLITAKFWNLDLLRSAKAEDLAAIHEIGDRIAESLVKFIHSESGSQTLSDL 606 Query: 577 LAEGVHW--PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 A GV P+ EE + P AGK +V TG+L +RD+ KAR+ ELG + A SVSK Sbjct: 607 DAVGVTMSETEPVATPDEEANLPLAGKNIVATGTLQHYTRDEIKARIEELGGRAASSVSK 666 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 KTD +IAGE AGSKL KA+ LG+EV+ E + Sbjct: 667 KTDFLIAGEKAGSKLTKAESLGVEVLSEDDF 697 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 299/757 (39%), Positives = 393/757 (51%), Gaps = 93/757 (12%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ +L +R Y+ DAPEI DAEYD L R L +LE HPEL++ DSPTQ V Sbjct: 20 DLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEV 79 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK---VTWCCELKLDGL 119 G AF+ +RH M SL++VF E + +R L W E+K+DGL Sbjct: 80 GGEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALTQVRPGVAPRWLVEVKIDGL 139 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 AV++ Y +G LV AATRGDG TGED+T+NVRTI IP +L GE PA EVRGEVF+ A Sbjct: 140 AVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPAEFEVRGEVFMSSA 199 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G FANPRNAAAG+LRQ DP +TA+RPL F +G+G +E L ++ Sbjct: 200 AFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHGIGSVEAFGL-ESQ 258 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEE-----VLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 WGLPVS E A+E V+A + R L +IDG+V+K ++ Sbjct: 259 HEAYDALASWGLPVSPYTRRVEGADEEALAAVVAVIEEYGRRRHELIHEIDGIVLKADAF 318 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q LG +R PRWA A+K+P +E T +RD+ VGRTG +TP A LEPV VAG VS Sbjct: 319 ADQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFAVLEPVTVAGSTVS 378 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP------EDTREVVFPTHC 408 ATLHN D ++ G+ IGD VV+R+AGDVIP+VV VL R + RE V P HC Sbjct: 379 LATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLREKAIEAGRELREFVMPAHC 438 Query: 409 PVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE--- 464 P CG+ + EG+ RC C AQ ++H SR A DV+ +G++ LV+ Sbjct: 439 PSCGTPLAPAKEGDVDLRCPNARSCPAQLAGRVEHLASRGAFDVEALGEEAARWLVQGPG 498 Query: 465 --------------KEYVHTPADLFKL---TAGKLTG------------------LERMG 489 + A +F L T +TG + R G Sbjct: 499 EDPAEHEGHVRPEGPGPITAEAQIFDLASGTPEAITGPRGEDGLTDLQRSLGAVRVWREG 558 Query: 490 PKSAQ--------------------------------NVVNALEKAKETTFARFLYALGI 517 + + LEKAK R L AL I Sbjct: 559 RTKVDGRMVPSGVFTLKPYFFTAGTAKRPSAPTANTLRLFDELEKAKSQPLWRTLVALSI 618 Query: 518 REVGEATAAGLAAYFGTLEALEAASI----EELQKVPDVGIVVASHVHNFFAEESNRNVI 573 R VG A LA FG++ AL AA+ + L ++ VG ++A + +FAE+ +R ++ Sbjct: 619 RHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEIDGVGPIIADALIEWFAEDWHREIV 678 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 A GV E G TVV+TGSL SRD AK ++ G K +GSVS Sbjct: 679 DRWTAAGVAMEDE---QDESTPRTLEGLTVVVTGSLEGFSRDSAKEAILVRGGKASGSVS 735 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KKTD ++AGEAAGSKL KAQ LG+ V+DEAE LL Sbjct: 736 KKTDFLVAGEAAGSKLDKAQSLGVPVLDEAEFTALLA 772 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 334/780 (42%), Positives = 446/780 (57%), Gaps = 111/780 (14%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + +Q++ L TL + + Y+ +DAP +PDAEYDRL REL LE +HP+ P+SPTQ Sbjct: 1 MSTPQQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDE----------ESFLAFNKRVQDRLKNNEKVTW 110 RVG A L F + H VPMLSL+N F FLAF++RV L +V + Sbjct: 61 RVGGAVLDGFETVVHAVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKEL-GVAQVEY 119 Query: 111 CCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV 170 E K DGLAVS+LY+NG+LV AATRGDGTTGE++T N++T+R IPL+LHGE PA LEV Sbjct: 120 AAEPKFDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEV 179 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGEV + +A F +N+ G K FANPRNAAAGSLRQLD +ITA+R L FF YG+ L Sbjct: 180 RGEVLMLKADFAALNQRQLEAGQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQL 239 Query: 231 EGGE-LPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVV 288 G E LP++H+ L + G + A VL Y ++ E RP L ++IDG+V Sbjct: 240 SGVERLPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGMV 299 Query: 289 IKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHV 348 +KVNSLA+Q+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTGA+TPVARL PV V Sbjct: 300 VKVNSLAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVFV 359 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED---------- 398 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+L RP Sbjct: 360 GGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQME 419 Query: 399 --TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GD Sbjct: 420 PLHEPFRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLGD 479 Query: 457 KIIDQLVEKEYVHTPADLFKLTAGKLTGLER---MGPKSAQNVVNALEKAKETTFARFLY 513 K I+ LV + +H+ AD+++L KL ++ K AQN+++++ +++ ARFL+ Sbjct: 480 KQIEALVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFLF 539 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ALGIR VGE+TA LAA FG L+ + A L +PD+G VVA + ++F + + + ++ Sbjct: 540 ALGIRHVGESTAKQLAAAFGNLDTVRRAPEPILACLPDIGSVVAHAIAHYFRQPAQQKML 599 Query: 574 SELLAEGVHWPAPIVINAEEIDSP-----------FAGKT----VVLTGSLSQMSRDDA- 617 +LL A +P + K L GSL + D A Sbjct: 600 DDLLQHVAPQAAAPSPQTRANAAPEQWLQRLPNIKLSEKRAAELWQLAGSLHALQTDQAL 659 Query: 618 ------------------------KARLVELGAKVAGS-------VSKKTDLVIAG---- 642 +A V+GS ++ KT V+ G Sbjct: 660 PQEWQNWRRQPAHAALLQEITAFTEALPESSTDNVSGSLHPENHPIAGKT-FVLTGTLPT 718 Query: 643 ----------EAAGSK---------------------LAKAQELGIEVIDEAEMLRLLGS 671 EAAG K L KAQ LG+ V+ E E+L +LG+ Sbjct: 719 LKRDQAAALIEAAGGKVSGSVSKKTDFVVAGEAAGSKLEKAQALGVAVLSEEELLGMLGN 778 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 264/672 (39%), Positives = 403/672 (59%), Gaps = 7/672 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I++ + +LR L+ Y YHV++ + D+ YD+L R+L LE ++P LI+ DS TQRV Sbjct: 5 NIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSVTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 G P F+ ++H++P+ SL+N F+ + A+ R Q LK+ E + + ELK+DG A Sbjct: 65 GEKPALHFNSVKHDIPLYSLENAFNLQELEAWENRNQKYLKSQENQLIKYIAELKIDGSA 124 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L TRGDG GEDIT N+RTI +IPL L+ ++ P+ + V GE FLP Sbjct: 125 LSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAFLPLDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++IN+ ++ G +FANPRNAAAG+LRQLD +I ++R L FF Y + + Sbjct: 185 FKRINKQKQKEGKSLFANPRNAAAGTLRQLDSKIVSERKLQFFAYSLYADNLD--IKSQW 242 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L ++ G V+ LC+S + V ++++ + + L + DGVVIK+NS Q++L Sbjct: 243 DTLKFLQECGFLVNPYYRLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHILQKEL 302 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + R PRWA+A K+PA+E T V D+ F GRTGA+TP+A + PV + G +V ATLHN Sbjct: 303 AYTQRFPRWAIALKYPAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVRKATLHN 362 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I +LG+ IGD V IR+AG++IP+V+ V+ + R T+ CP C S + Sbjct: 363 IDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCPKCNSMLVSFSN 422 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAV RC C A K +L H+ SR A+D+ G+G+KIID L+ V++ +DL+ L Sbjct: 423 EAVVRCINN-SCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVNSISDLYHLNFQ 481 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +++ LERMG KSA+N++ ++E +K ++ + LY LGI VG TA L F +++ L Sbjct: 482 EVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLTENFSSVQQLLQ 541 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP--F 598 A + L + +G VA + ++F+ E N+ +ISEL G + + F Sbjct: 542 APYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISELDKNGFVLENKNLGINQNKPDKQIF 601 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 T V+TGSL+ + R + K + G KV SV+KKT+ ++ GE GSKLA+ +L I Sbjct: 602 FNITFVITGSLNTLKRSEIKNLIENFGGKVVNSVTKKTNYILVGENPGSKLAEGMKLNII 661 Query: 659 VIDEAEMLRLLG 670 ++E + LR+L Sbjct: 662 RLNETDFLRILK 673 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 338/624 (54%), Positives = 430/624 (68%), Gaps = 26/624 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ +LRT L H Y Y+V+D P IPDAEYDRL REL+ LET++P+L+TPDSPTQR Sbjct: 5 QAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN----------EKVTWC 111 V P +AF ++RHE+PMLSL N F+E+ L F++RV++ L + +V + Sbjct: 65 VSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVEYS 124 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 CE KLDGLAVS+LYE G LV ATRGDG+TGEDITSNVRTIR +PLKLHGE P LEVR Sbjct: 125 CEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVR 184 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEVF+ +AGFE +N A TGGK FANPRNAAAGSLRQLD +ITA RPL F YG G + Sbjct: 185 GEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQVS 244 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G LPDT +G L F+ WG+P+S + L + A+ +Y + R L ++IDGVV KV Sbjct: 245 G-TLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVVFKV 303 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 N +A Q +LGF AR PRWA+A KFPA+E++T + VEFQVGRTGA+TPVARL+PV VAGV Sbjct: 304 NRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVAGV 363 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VSNATLHN DE+ RLGLRIGD VVIRRAGDVIPQV+ VVL RP D + + P HCPVC Sbjct: 364 TVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHCPVC 423 Query: 412 GSDVERVE------------GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII 459 GS VER + A+ RC G L C AQ K+++ HFVSRRAMD+DG+GDKI+ Sbjct: 424 GSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKIV 483 Query: 460 DQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIRE 519 +QLV++ V +PADL+ LT ++ LE S N++ A+ +++ + ARF++ALGI + Sbjct: 484 EQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFALGIPD 543 Query: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL-- 577 VGE TA LA G+LE + A E L +PDVG VA +HNFFA+E NR VI++L Sbjct: 544 VGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQLRDA 603 Query: 578 AEGVHWPAPIVINAE-EIDSPFAG 600 GV + AE + AG Sbjct: 604 EHGVQLQEEGEVAAEFAACASLAG 627 Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 69/166 (41%), Positives = 97/166 (58%), Gaps = 7/166 (4%) Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 + A F+ L I + A LA+ FG+L+ + A +L++V + A + +FF E Sbjct: 624 SLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFDE 683 Query: 567 ESNRN----VISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLV 622 +N + ++L G+HW + P AG+T VLTG+L MSRD AK +L Sbjct: 684 PANVQRALAIEAQLREFGMHWQSERKAVE---GLPLAGQTWVLTGTLEAMSRDVAKDKLE 740 Query: 623 ELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 LGAKVAGSVS KT V+AG AGSKLAKA ELG++V+DE +L+L Sbjct: 741 GLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKL 786 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 295/695 (42%), Positives = 406/695 (58%), Gaps = 34/695 (4%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAP--EIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +++ ELR + H+ LY+ P EI D EYD L +EL+ELE++ PE + DSPTQ Sbjct: 14 VAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQI 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-KVTWCCELKLDGLA 120 VG + F +++H VPMLS++N L+ + + LK++ + E K+DGL+ Sbjct: 74 VGGSVSEGFKKVQHSVPMLSIEN-KPVTKMLSEVRSIIKELKDDAISIDIVAEPKIDGLS 132 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 SI YE LV AATRGDG GEDIT NV +I IP K+ + P +E+RGEV++ + Sbjct: 133 CSIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIP-KILPLDAPEVIEIRGEVYMSNSD 191 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++ + G K NPRNAAAGSLRQLDP +TA RPL FF Y G + + Sbjct: 192 FKQYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISNS-FAKSQW 250 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + WG V D + L S++E+ +++ +++E R L F IDG+V K+NSL+ QE++ Sbjct: 251 DALQTLRGWGFKVCDDIRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLNSLSLQERV 310 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G RAPRWA A KFP +++ T ++++ VGR+GA+TPVA L PV + G VSNATLHN Sbjct: 311 GQTNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTTVSNATLHN 370 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+E RI D +V++RAGDVIPQVV+VV+ +R + VFP+ CPVCGS R Sbjct: 371 QDEVECKDFRIDDTIVVQRAGDVIPQVVSVVIEKRLSGSIPFVFPSACPVCGSKAVREPR 430 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 EAV +CTGGL C AQ E LKHFVSR A ++DG+G+K I+ K + +P D+F+L Sbjct: 431 EAVWKCTGGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASPVDIFRLEEI 490 Query: 480 --------------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 L + G SA N+ A+ ++ T RF+YALGI +VGE TA Sbjct: 491 LSPPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALGIPKVGEVTA 550 Query: 526 AGLAAYFGTLEA-----LEAASIEE-----LQKVPDVGIVVASHVHNFFAEESNRNVISE 575 LA + +L+ L+AA E L + +G VVA + +FFAE N V+ Sbjct: 551 KILADNYVSLDNWQSSMLKAAERESECYQHLISIDGIGSVVADEIVSFFAEAHNIQVLDS 610 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L + I S +GK VV TG L + SR AK + GAKVA VS+K Sbjct: 611 LKN---YLSVEDFTKPAIISSNISGKIVVFTGELEKRSRKAAKIEAEKFGAKVATDVSRK 667 Query: 636 TDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 TD+VIAG GSKL KAQELGI+++ E E L+ Sbjct: 668 TDIVIAGTDPGSKLRKAQELGIKILSEDEWEHLIN 702 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 261/678 (38%), Positives = 385/678 (56%), Gaps = 10/678 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 S E ++ +LR T+ H Y++ +AP I DA+YD LM+ L LE +HPE P SP+ R Sbjct: 4 NSTELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSPSLR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG AF Q+ HE PMLSL N ++ + KR D L + V W E+K DG ++ Sbjct: 64 VGRDRNDAFVQVAHEQPMLSLSNTYNYDEIAEICKRT-DTLLATDDVPWVAEMKYDGSSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH-----GENIPARLEVRGEVFL 176 S++YE GVL A TRGDGT G+D+T NVRTI+++PL+LH + R+EVRGEV L Sbjct: 123 SLIYEEGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRGEVLL 182 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-EL 235 P FE++N + FANPRNAAAG+L+ L+ RI A+R L CY + L+ L Sbjct: 183 PFKEFERLNGERTAESEAPFANPRNAAAGTLKTLNSRIVAQRRLLCICYYLYALDDETRL 242 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 PD++ R+ ++ G + + + + R L + DG+V+KV+SL Sbjct: 243 PDSYYERMKLLEEMGFDTGVAPFKSSDLSALYHYIDEWDVQRGDLPYATDGIVLKVDSLT 302 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 QQ LG A++PRWA A+K+ + + V++QVGR+G +TPVA +EPV ++G +V Sbjct: 303 QQRVLGNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVANVEPVLISGTVVRR 362 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHN + I+ L L D V I + G++IP++ V S R + V P CP CG+ + Sbjct: 363 ATLHNEEFIKSLDLHYHDYVYIEKGGEIIPKITAVEPSLRRPEAEPVRLPERCPACGAPL 422 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 ++++G C C Q ++H+ +RRA D+ +G + ID L ++ + DL+ Sbjct: 423 QQIDGSVGYYCVNSYACPPQIMGRIEHYCTRRAADI-NVGPETIDALFDRHLIENIDDLY 481 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 KLTA L L KS N++ ++E++K FAR LY +GIR VGE TA LA +F ++ Sbjct: 482 KLTASDLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFVGEGTAKTLARHFQSI 541 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINAEEI 594 + L A+ ELQ +PDVG +A V FF+ E N+ +I+EL GV Sbjct: 542 DRLAQATAYELQALPDVGPKIAEQVVYFFSLERNQQLIAELQRCGVRLEECAEEATDMPQ 601 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQ 653 + G+ +V++GS +Q SRD+ K + + G GS+S +T V+ G G SK AKA+ Sbjct: 602 SNRLEGERIVISGSFTQHSRDEYKQLIEQHGGTNVGSISSRTTFVLMGSDMGPSKRAKAE 661 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LGI ++ E E L L S Sbjct: 662 QLGIPLVTEEEFLARLNS 679 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 276/679 (40%), Positives = 391/679 (57%), Gaps = 23/679 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + EL+ L LY+ + D ++D ++E+ LE K+PEL S TQ+VG+ Sbjct: 9 RTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPELRGKGSLTQKVGS 68 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN----EKVTWCCELKLDGLA 120 F+++ H VPMLS+ NV+ EE F K ++ L + W CE K+DG++ Sbjct: 69 DLTNDFAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICERKIDGVS 128 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIP-------LKLHGENIP-ARLEVRG 172 +S++YENG L AATRGDG G+D+T N TI IP LK+ IP EVRG Sbjct: 129 LSVIYENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQGTFEVRG 188 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 EV++ + FE++NE K F N RN +GSL+ RP+ FF Y + Sbjct: 189 EVYMEREAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYHIPQSNN 248 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 TH L Q K+ G +D T ++ +E++A K+ R +L FDIDG+V+K+N Sbjct: 249 ----KTHEENLKQLKRLGFHTNDYWT-ADTVDEIMAISEKIGASRDSLPFDIDGMVVKLN 303 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L QQ +LG +++PRWA+A+KF A+ T + VEFQVGRTGA+TPVA L PV +AG Sbjct: 304 DLQQQRELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLAGTT 363 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V ATLHN DE+ RL L GD V + + G++IP++ +V RP VV P CPVCG Sbjct: 364 VKRATLHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCPVCG 423 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 + ++GE + RC L C AQ + +HFVSR AM+++ +G +I L+ + Sbjct: 424 EQLTHIDGEVILRCEN-LHCKAQVQCLFEHFVSREAMNIENLGPALIASLLATGKIKRIP 482 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL++LT L ERM KSA+NV +A++ +K+ + L+ LGIR VG +A +A +F Sbjct: 483 DLYRLTLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRTSARNIAKHF 542 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 TLE + A++EELQ V DVG + V+ FF N I EL+A G+ V+ Sbjct: 543 RTLEKIRTATVEELQNVTDVGERIGKSVYEFFHTPLYTNEIDELVALGLPTEFKGVVK-- 600 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 + F G+T V+TG+L M RD+A+ + E G KV+GSVSKKT V+AGEAAGSKL KA Sbjct: 601 ---TLFQGQTAVITGTLPNMDRDEARKLIEENGGKVSGSVSKKTSWVLAGEAAGSKLTKA 657 Query: 653 QELGIEVIDEAEMLRLLGS 671 ELGI V DEA ++ + + Sbjct: 658 NELGIPVHDEAWLMAQIAN 676 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 291/690 (42%), Positives = 392/690 (56%), Gaps = 29/690 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ + + + Y+V+D+P I DA++DR MR L LE + PEL TPDSPTQ V Sbjct: 62 DPREEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQTV 121 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G A F+ H M SLDN F E A+ R++ E CELK+DGLA++ Sbjct: 122 GGAVSTDFTSHPHLRRMESLDNAFSVEEVEAWYARLRR--DGVEDPALLCELKVDGLAIN 179 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQA 179 +LYE G LV A TRGDGTTGED+TSNV+TI ++P +L G + +PA +EVRGEVFLP Sbjct: 180 LLYEEGRLVRALTRGDGTTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPVE 239 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 FE++NE G FANPRN+AAGSLRQ DPRITA R L C+G+G G E P Sbjct: 240 AFERLNESLLEAGKAPFANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFE-PQAQ 298 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTL-GFDIDGVVIKVNSLAQQE 298 WGLP SD+V + + + V + R T+ ++IDGVV+KV+ +A Q Sbjct: 299 SHAYDALAAWGLPTSDQVRVVSTLKGVEGYIENAGARRHTIVPYEIDGVVVKVDDVALQR 358 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG +RAPRWA+AFK+P +E + ++ VGRTG +TP A +EP VAG V NATL Sbjct: 359 RLGSTSRAPRWAIAFKYPPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENATL 418 Query: 359 HNADEIERLGLR------IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 HN E+ER +R GD V++R+AGDVIP+++ VL+ RPE + V PT CP CG Sbjct: 419 HNFYEVERKDVRPGGPGDPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSCG 478 Query: 413 SDV-ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + + E+ EG+ RC C Q +E + SR A D++G+G + L++ E + Sbjct: 479 TPLVEQKEGDKDRRCPNHEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIANE 538 Query: 472 ADLFKLTAGKLTG--LERMGPKS----------AQNVVNALEKAKETTFARFLYALGIRE 519 D+F L A L L PK Q +++ L+KAK+ R L AL IR Sbjct: 539 GDVFDLDAAALLRAPLFTRAPKKDEDGPQLSANGQRLLDNLDKAKQVPLWRVLVALSIRH 598 Query: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 VG LA FG++ A+ AA+ E+L VG +A V +F E + ++ + Sbjct: 599 VGPKAGRALATEFGSMAAIRAATEEQLAAAEGVGPTIAEAVIEWFKEPWHVEIVDKWERA 658 Query: 580 GVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLV 639 GV E AG TVV+TGSL SRD AK ++ G K AGSVSKKTD V Sbjct: 659 GVTMADE---RDESTPRTLAGLTVVVTGSLVDFSRDSAKEAILSRGGKAAGSVSKKTDYV 715 Query: 640 IAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + GE AGSK KA++LG+ V+DEA LL Sbjct: 716 VVGENAGSKADKAEQLGVPVLDEAGFKTLL 745 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 249/671 (37%), Positives = 388/671 (57%), Gaps = 12/671 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ ELR + +H Y+ D PEI D EYD+L ELR LE HPE SPTQ+V Sbjct: 2 DIKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKV 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G +++H++P++SL +VF +E +F +++ + + + E K+DGL V Sbjct: 62 GGTVKRELRKVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPK---FVVEKKIDGLTVV 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y NG L A TRGDG+ GE + N+ +++IP + + LE+RGE+++ F Sbjct: 119 LRYYNGELKEAITRGDGSIGESVFENILQVKSIPKHIPSKL--NYLEIRGEIYMTNENFI 176 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+NE GGK+F NPRN AAG++RQLD I R L F + + + EG + +TH Sbjct: 177 KVNEKQEEIGGKIFKNPRNLAAGTIRQLDTSIVKDRNLDIFIFNLEISEGKKF-ETHSET 235 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L G VS +CE+A+EV +EE R LG+ IDG V+KV++L + LG Sbjct: 236 LEWLSNQGFDVSPNFKICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISLGM 295 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ P+W VAFK+P +++ T + D+ QV RTG + P+A L PV +A +S ATLHN D Sbjct: 296 TSKVPKWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHNQD 355 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I+ +RIGD V+I++AGD+IP+++ + +RP+ ++ + P CPVC S R Sbjct: 356 FIDSKDIRIGDTVIIQKAGDIIPEIIRSIPEKRPDWAKKYIIPDVCPVCNSKTIREPDGV 415 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC+ C AQ + +FVS+ AM++ G G ++ L++ Y+ +D++ L K Sbjct: 416 DTRCSNP-DCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKISDIYILKNYKD 474 Query: 483 TGLER---MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +E+ KS N++NA+E +K+ R + LGIR VG+ +A LA F +++ L Sbjct: 475 ALIEKGIIGKEKSVNNLLNAIELSKDNDIDRLITGLGIRNVGKQSAKILAGNFKSMDELA 534 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A+ E+L ++ D G + FF + +I +L GV+ + + ++ID+ F Sbjct: 535 GAAYEQLIELEDFGPTTVPDILEFFNSNAYIELIKKLKEAGVNTISKTL--QKKIDNRFL 592 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT V+TG+L M RD+A + G KV+GSVSK+T V+AGE AGSKL KAQ+LGI + Sbjct: 593 GKTFVITGTLPTMKRDEAAEIIQSFGGKVSGSVSKRTSFVLAGEEAGSKLTKAQQLGISI 652 Query: 660 IDEAEMLRLLG 670 I E ++ ++ Sbjct: 653 ITEEDLKDMIK 663 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 777 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 259/672 (38%), Positives = 396/672 (58%), Gaps = 12/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I ++ +L+ L Y+V D P + D EYD ++EL LE +PE IT DSP+Q+ Sbjct: 4 EQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSPSQK 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F +I H+ PMLSL NVF+ + FL FN +V + NN + ELK+DGL++ Sbjct: 64 VGGTVSEKFLKITHKTPMLSLGNVFNFDEFLEFNTQVSK-VSNNLNNEYVAELKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++YENGVLVSAATRG+G GED+T+NVRTI++IPLK+ R+EVRGE++L +A F Sbjct: 123 SLVYENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKISK---KERVEVRGEIYLSKAEF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ +F NPRNAAAG+LRQLD +I A R L F Y + L Sbjct: 180 EKINQKRLLNNEDLFINPRNAAAGTLRQLDSKIVASRNLDAFLYYYISDDSPNL--NQYE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 +L+ + G + LC++ +++ A+ K + L + IDG+V K+N Q LG Sbjct: 238 SILKLNQLGFKTNKETMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F ++ P+WA+A+KFPA+ + T + D+ VGRTG IT A+LEPV + G +S ATL+NA Sbjct: 298 FTSKIPKWAIAYKFPAEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNA 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I+ LRI V I++AGDVIP+V+ + E + +CP C S +E+ E E Sbjct: 358 EYIKSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNLEVFQPILYCPNCHSLLEKNENE 417 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--A 479 C C + SL+HF SR AM++ +GD+ ++ L E + +D++KL Sbjct: 418 VDQFCINS-SCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEYK 476 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 ++ +E G KS N+++++ +K + + L+ LGIR +G TA LA + ++ L Sbjct: 477 DQILAIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNLM 536 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS +EL ++ +G +A + ++F E N +I+EL + +++ + DS A Sbjct: 537 KASYDELIQINSIGESLALSIIDWFKIEDNLKLINELKSFNINFNY--LGAKINSDSIIA 594 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 KT V+TG+L++ R++ K + K++GS+SK+TD ++AG GSKL KA++LG+ + Sbjct: 595 NKTFVITGTLTR-PREEFKTLIENNAGKISGSISKQTDYLLAGNNVGSKLEKAKKLGVII 653 Query: 660 IDEAEMLRLLGS 671 IDE + LL S Sbjct: 654 IDEQQFFDLLKS 665 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 300/671 (44%), Positives = 448/671 (66%), Gaps = 2/671 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M S + ++ +LR L +EY YH ++ I DAEYD L R+L ELE K+ ELI DSPTQ Sbjct: 1 MTSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG+ L F +I+H PMLSL+N FD +L F KR++ + NNE +++CCELKLDG+A Sbjct: 61 KVGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +SI+YE G+ V AATRGDG GE+ITSN R I +IPLKL G +IP RLE+RGEVF+ ++ Sbjct: 121 ISIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSN 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-GVLEGGELPDTH 239 F K+N+ + K F+NPRNAAAGSLR +DP ITA+R L F C+G ++ + TH Sbjct: 181 FIKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTH 240 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL++ WG+PV+ + +C S E++ FY K+ + R L FDIDG+VIKVNSL Q++ Sbjct: 241 YQRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKK 300 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 +G ++PRWA+AFKF +E++T + DV+FQVGRTG ITPVA PV+++GV++S A+LH Sbjct: 301 IGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASLH 360 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EIERL L D + I R+GDVIP+++NV+ R ++ ++++FP+ CPVC +++ Sbjct: 361 NKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLENI 420 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E + RC GL C AQ+K++L HF S++++ V G+G KII++LVEK V P D F L Sbjct: 421 EEKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYLKD 480 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L L+ +G + + ++N+++K K+TT F+YALGI VGE A +A YF L+ L Sbjct: 481 IDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLM 540 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLA-EGVHWPAPIVINAEEIDSPF 598 ++I EL + VG ++++++ N+F+ SNR ++ +L+ G+ + + F Sbjct: 541 NSNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQAGIFLNDQEIHKINSEKTYF 600 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 K +VLTG SR + K L+ LGAK++ ++S+KTD +I G GSK +A++L ++ Sbjct: 601 FNKKIVLTGVFKSFSRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSKFFRAKDLDVK 660 Query: 659 VIDEAEMLRLL 669 +I++ E+ L+ Sbjct: 661 IINQEELNSLI 671 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 273/732 (37%), Positives = 387/732 (52%), Gaps = 69/732 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S+++Q L ++ +++ Y++ +PDA+YD L+ EL +E + SPTQRV Sbjct: 52 SLQEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGG-APQGSPTQRV 110 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F ++ H PMLSLDN F E A+ RV L V++ CE+K+DGLAVS Sbjct: 111 GGTFSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGGA-VSYLCEVKIDGLAVS 169 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI--PARLEVRGEVFLPQAG 180 + YE G LV A TRGDG TGED+T NV+TIR+IP +L G+ P +E+RGEVF+ A Sbjct: 170 LTYERGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMKVAD 229 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---- 236 F +N+ R GGK FANPRNAAAGSLRQ DPR+TA+R L+ + +G+G LE Sbjct: 230 FADLNDSQARQGGKTFANPRNAAAGSLRQKDPRVTAQRRLSMYAHGIGALEWDGQSPVDL 289 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 +++WG+PVS ++ + V E+R ++ ++DG VIKV+ +A Sbjct: 290 ARQSDVYALYQQWGIPVSSHNSVEHDLDAVTRKIEYYRENRHSIEHELDGFVIKVDEVAA 349 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q+QLG +RAPRWA+AFK+P +E T + D++ VGRTG +TP +EPV VAG VS A Sbjct: 350 QKQLGSTSRAPRWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGSTVSMA 409 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN E+ R +R GD V++R+AGDVIP+++ V S RP+ + PTHCP CG+++ Sbjct: 410 TLHNFHEVRRKDVRPGDTVIVRKAGDVIPEILGAVESLRPDGLPQWEPPTHCPSCGTEIR 469 Query: 417 R-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE--------- 466 EG+ RC C +Q +E + SR A D++ +G + L + E Sbjct: 470 EAKEGDKDLRCPNAQSCPSQLRERVFALASRGAFDIEALGWESAVALCDPESSRPVGPDA 529 Query: 467 ----------YVHTPADLFKLTAG---------KLTGLERMGPKSAQ------------- 494 + + A +F L + KS Sbjct: 530 PQLDGPPLTPVLTSEAHIFDLADENSSLTRSLKDVVVWRERKLKSGTRWELVPYFYTRAT 589 Query: 495 ------------NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + ++KAK R L AL IR VG A LA FG+++ + AAS Sbjct: 590 ASKSSVPTATTVKLFEEVQKAKSQPLWRVLVALSIRHVGPTAARALATEFGSMDRIRAAS 649 Query: 543 IEELQKVPDVGIVVASHVHNFFAE----ESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 + EL V VG +A V +F E + +++ GV I E + Sbjct: 650 VSELAAVDGVGSTIAESVVEWFREVDGNQWRPAIVAAWAKAGVSMED---IPDESVQRTL 706 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 G TVV+TG L +RD K +V G K +GSVSKKTD V+ G AGSK KA+ELG+ Sbjct: 707 EGITVVVTGGLENFTRDGVKEAIVARGGKASGSVSKKTDFVVVGANAGSKETKARELGLR 766 Query: 659 VIDEAEMLRLLG 670 +++E E RLL Sbjct: 767 ILNEEEFTRLLA 778 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 313/778 (40%), Positives = 424/778 (54%), Gaps = 111/778 (14%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L L + H Y+ DAP+I DAEYD L + +E K PEL++ DSPTQ+V Sbjct: 19 KAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDSPTQKV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 GAAP F++++H VPMLSL N F ++ F RV+ LK + + E K+DGL+ Sbjct: 79 GAAPARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKIDGLS 138 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YE+G LV AATRGDG TGED+T+NVRTI+ IP L PA E+RGEV++ ++ Sbjct: 139 LSLRYEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVYMLKSD 198 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD-TH 239 F +N+ G FANPRN+AAGSLRQ D ITA RPL FF Y G E +LP+ T Sbjct: 199 FLALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWG--EFSDLPEATQ 256 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 G L K+ G V+ +TLC+S ++ LAFY K+ E+R TL +DIDGVV KV+ L QE+ Sbjct: 257 YGMLGWLKRAGFTVNPLITLCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLDWQER 316 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LGF RAPRWA+A KF A++ T + +E QVGRTGA+TPVARL PV V GV+V NATLH Sbjct: 317 LGFAGRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQNATLH 376 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER-- 417 N D I+ L + IGD VV++RAGDVIPQ+V+VV +RPED FP CP CGS R Sbjct: 377 NEDYIKSLDIHIGDTVVVQRAGDVIPQIVSVVRDKRPEDAEPYEFPKFCPACGSHAVRDE 436 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 EGEAV RCTGGLIC AQ E L+HFVSR A D+ G G+ ++ L E+ V PAD+F L Sbjct: 437 DEGEAVRRCTGGLICPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPADIFAL 496 Query: 478 T-----------------AGKLTGLERMGPKSA-----------QNVVNALEKAKETTFA 509 A + KS+ +N++ A++ + F Sbjct: 497 HSKVDELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDARRTVAFN 556 Query: 510 RFLYALGIREVGEATAAGLAAYFGT----LEALEAASIE-------ELQKVPDVGIVVAS 558 RF++ LGIR VGE T+ L +F L+ ++AA++ +L+ V +G + Sbjct: 557 RFIFGLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGPAWLDLKNVRYIGEITLE 616 Query: 559 HVHNF-----------------------FAEESNRNVIS-ELLAEGVHWPAP-------- 586 + + N I+ L A P P Sbjct: 617 RLLEIQGGADTNEERQGFQPDARQRASLLSHYGNEEKIAGALQAARSEAPGPAFQQLAND 676 Query: 587 ---------------IVINAEEIDSPFAGKTVV-----------LTGSL-------SQMS 613 N ++ + + V ++G + + + Sbjct: 677 SEIGEVATQSLIDFFEETNNRQVVTALMDQVQVERPAAASAKSPISGKIVVFTGALERTT 736 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 RD+AKA LGAKVA SVS KTDLV+AG +AGSKL AQ+ G++V+ E E + G+ Sbjct: 737 RDEAKAIAERLGAKVASSVSSKTDLVVAGPSAGSKLRDAQKFGVKVLTEEEWAEISGN 794 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 264/670 (39%), Positives = 378/670 (56%), Gaps = 16/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q+ E L+ Y Y+V+D PE+PD YD+L RE+ E E HP+ I P SPTQ Sbjct: 1 MIKNYQEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+GA P F +I+H M S+++VF++ + +RV + + + E K DG + Sbjct: 61 RIGAEPAKEFKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGR-KDLQFYIEPKFDGAS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++++YENG+L SAATRGDG GED+T+N +TI +IPL + + +E+RGEV + + Sbjct: 120 LNLIYENGLLKSAATRGDGEVGEDVTANAKTIPSIPLGI---DYKGLIEIRGEVVIRKDD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEK+N + G FANPRNAAAGSLRQLDP++TA+R L F+ + +G Sbjct: 177 FEKLNHERALKGESTFANPRNAAAGSLRQLDPKVTAQRKLYFYPWDIGYNTLN--FKYQH 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ + G + +CE+ EE+ Y + ++R L +DG+V+KV+ +A E L Sbjct: 235 EKMDFVYQQGFIKPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKVDEIALHEIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ + PRW VA+KFPA E+MT + D+ QVGRTG ITPVA LEPV + GV+V ATLHN Sbjct: 295 GYTVKYPRWMVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EIER +RIGD V++ R+GDVIP+V V+ R ++V P CPVCG V ++ Sbjct: 355 YAEIERKDIRIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPV--LDE 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + +C L C A+ S+ +F S++ +D+ G+G+ + L EK V DLFKL Sbjct: 413 GILIKCQN-LSCPARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L K AQN+++A + K RF+ ALGI +GE + L FG Sbjct: 472 DLLRLPGFAEKKAQNLIDATQSVKGVECWRFVNALGIEHIGEVASKKLCEKFGL--DWYK 529 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A E+L ++ G + + F E N+ I +L+ P E +SP A Sbjct: 530 APKEKLYEIEGFGPEMVRSIEEFV--EVNKEKIEKLIELLQ--PTEPKKEEEVENSPLAH 585 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG + ++ R K L GA V SVS TD V GE GSK KAQ+LG+ ++ Sbjct: 586 KTVVLTGEM-KLPRSKIKELLERAGAHVTNSVSHHTDYVFYGENPGSKFQKAQQLGVPLL 644 Query: 661 DEAEMLRLLG 670 E +M LL Sbjct: 645 PEEKMWELLK 654 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 273/670 (40%), Positives = 393/670 (58%), Gaps = 16/670 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q T+LR +R H+Y Y++ +P I D YD L L+ LE L T SPT+R Sbjct: 72 EAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIF-NLDTEASPTRR 130 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG PL + H MLS+D +S F++RV+D + + + CE K DGL+V Sbjct: 131 VGGEPLDELETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVG---DLEYICEPKFDGLSV 187 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE+G + AATRGDG G+D+T+ V T+ A+PLKLHG + P+ L VRGEV++P+AGF Sbjct: 188 EVIYEDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHG-DYPSYLAVRGEVYMPKAGF 246 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + N + K FANPRNAAAG+LRQLDP + A+RPL+ F Y + L+ ELP Sbjct: 247 REYNRERIECDEKPFANPRNAAAGTLRQLDPGVVAERPLSCFFYDI--LDATELPPDQWT 304 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + WGL +DR++ +S ++ +A+ +++ R L ++IDG VIKVN +E LG Sbjct: 305 TLNDLQSWGLRTNDRISRVDSIDDAIAYRDQLKAARAELNYEIDGTVIKVNDRGNREILG 364 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +R+ RWA A+KFP + ++T + D+ QVGRTG +TPVA L+PV V GV VS A+LHN Sbjct: 365 ATSRSVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNP 424 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 +EI+RL + GD+V +RRAGDVIP+V V FP CP+C S VE+ Sbjct: 425 EEIKRLSVNSGDEVRVRRAGDVIPEVAEVTQKRATGT---FNFPNQCPICHSSVEQ--DG 479 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 +A CTGGL C AQ ++ H+ SR A+D+DG+G++ ++QLVE + ADL+ L+ Sbjct: 480 PLAFCTGGLTCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVAD 539 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L+ L+ G SA+N++ A+ + + + FL LGI EVG A LA F +A+ A Sbjct: 540 LSKLDGWGTTSAENLIQAISETQTPSLTDFLVGLGIPEVGPTIARNLAGTFDNFDAIIDA 599 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 L+++ D+G V++H+ FF E NR I LL+ GV + ++P + Sbjct: 600 DEAALREIEDIGPTVSTHISEFFTNEQNRAAIDNLLSAGV--TPQTQQSTATTNAPLSDL 657 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVI 660 T V TGSLS + R A + G GSVS TD ++ G+ GS K A+ + I Sbjct: 658 TFVFTGSLS-VPRTTATTYIERHGGNATGSVSSNTDYLVIGDNPGSTKRIDAERNDVPEI 716 Query: 661 DEAEMLRLLG 670 DE E LL Sbjct: 717 DETEFTELLA 726 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 236/672 (35%), Positives = 384/672 (57%), Gaps = 12/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I+Q++ L L Y Y+ + P++ D +YD L++EL LE +P+ P SPT + Sbjct: 5 DPIKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYPQFKLPYSPTLK 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G FS I+H+ PM+SL NVF+ E AF R+ ++ + ELK+DG+A+ Sbjct: 65 IGGFVEKKFSTIKHKTPMMSLANVFNIEELKAFYDRIVKKI---PTFSLLTELKIDGVAI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y+ G+LV A TRG+G GED+T N +TI+ IPL+L+ + LEVRGE++L F Sbjct: 122 SLKYQKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNED---LDLEVRGEIYLSHPDF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+N ++ +F+NPRNAA+G+LRQL+ + AKR L+ F YG+ + T Sbjct: 179 EKLNAQRKQENKPLFSNPRNAASGTLRQLNSAVVAKRNLSIFVYGIA--DPYLTKPTQKE 236 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L+ G + + E +L+ K + + L +D DG+VIK+N L +G Sbjct: 237 TLVFLTALGFATNPHHYFVSNFENLLSVIEKYKSIKEQLTYDTDGIVIKINELVFHSLIG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A+APRWA A+KF + ++++ FQVGRTG ITPV + PV V G LVS LHN Sbjct: 297 ATAKAPRWATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMVDGSLVSKVFLHNY 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I + +RI D V++ +AG VIP+++ V+ S+R + + + CP C + +E+ G Sbjct: 357 DYICKKDIRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKCPSCKTILEKQPGG 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 C C Q+ + L HFVS+ AMD++ +G++ I +K + P+DL+ L + Sbjct: 417 IDYFCLNP-NCREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLITKPSDLYLLKNHQ 475 Query: 482 --LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L + G K N+++A+E +K+ F L+ALGI+ +G+ + LA YF T+E L+ Sbjct: 476 HILQEISGFGAKKITNILDAIEASKQKGFEDVLFALGIKHIGKKVSQVLAKYFQTIENLQ 535 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 ++ + + ++ ++GI +A + +F+ N +++L GV + + + F Sbjct: 536 QSTSDTITQIREIGIKIAQSIQQYFSNSCNLEEVTKLKKLGVSFQSTNSQKP-TTQNIFT 594 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 K +VLTG+L + SR + L ++GA + S+S KT+ +I G AGSKL KAQ+L I + Sbjct: 595 NKKIVLTGTLQKYSRLQIQQILEQMGAIITNSLSLKTNYLIVGINAGSKLTKAQKLQIPI 654 Query: 660 IDEAEMLRLLGS 671 I+E E+ +++ + Sbjct: 655 IEEKELQQIIEN 666 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 241/668 (36%), Positives = 397/668 (59%), Gaps = 10/668 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L + Y+ + I D E+D L++EL LE K+P+ SPT VGA+ Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEISSPTTSVGAS 88 Query: 66 PLA-AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F ++ H PMLSL N ++ + F +R++ ++ +++ +C E+KLDGL++S+ Sbjct: 89 LKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSISLT 148 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV A TRGDG GED+T N+ I +I L +E+RGEV LP A FEK+ Sbjct: 149 YRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQA---IDMEIRGEVVLPLASFEKL 205 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G ++FANPRNAA+G+LRQLD +I R L + Y + + L +H + Sbjct: 206 NNERLEKGEELFANPRNAASGTLRQLDSKIVKDRGLDAYFYFLVEADKLGL-KSHSESIK 264 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + G+ + L E+++++ + E++R +L ++ DG+VIKV+ + +++G+ + Sbjct: 265 FLESMGIKTTGIFELLETSKDIEKRINYWEKERESLPYETDGLVIKVDEINLWDEIGYTS 324 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PRWA+A+KFPA + T + DV +QVGRTG +TPVA L+ V ++G V A+LHN EI Sbjct: 325 KTPRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNISEI 384 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R +RIGD+V I +A ++IPQVV + ER + + + PT CP+C +ER EG Sbjct: 385 QRKDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGLVDI 444 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKL 482 +C C A+ + +++FVSR A+++ G+G KI+++ ++ Y+ T D+F L L Sbjct: 445 KCINEE-CPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNHREAL 503 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 +++MG KS +N++N++E++K + + LYALGI E+G+ T+ LA ++ L A + Sbjct: 504 ENIDKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKILAKASKNIDKLMAMT 563 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAGK 601 E+L + +G + A+ + FF +E N+ +I L +G+ + + + ++ F GK Sbjct: 564 FEDLTSIEGIGEIAANEIIAFFTKEKNQKIIQGLKEKGLKFEIKESEASVQNVNPNFVGK 623 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL-GIEVI 660 + TG+L +R+ K + +LG K SVSK D +I GE AGSKL KAQE+ I+++ Sbjct: 624 NFLFTGTLKHFTREQIKEEIEKLGGKNLSSVSKNLDYLIVGEKAGSKLKKAQEIPTIKIL 683 Query: 661 DEAEMLRL 668 E E + L Sbjct: 684 TEEEFIEL 691 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 249/674 (36%), Positives = 383/674 (56%), Gaps = 13/674 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ EL+ L Y Y+V+D P +PD YD+ MREL ELE +P+ T +SP+ Sbjct: 1 MDRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG F++++H+ PMLSL N FD F++ ++ + + + E K+DGL+ Sbjct: 61 RVGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQ--DNQNASVDLKGYVVEPKIDGLS 118 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +SI+Y+N L A TRGDG GED+TSN+ TI+ IP + + +EVRGEV++ Sbjct: 119 ISIIYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMAFHD 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N++ + K FANPRNAAAG+LR LD I A+R L+ F Y + + + TH Sbjct: 179 FYEMNDNLEESDKK-FANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELGI-KTHY 236 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + K VSD + ++ +EV+ + + R L + IDG+VIK+N+L +++ Sbjct: 237 ESIQFLKDNKFKVSDLIVKVDTIDEVINQIDRYTKVRNDLSYMIDGIVIKINNLEVYDEI 296 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++ P+WA+A+KFPA + + ++ VGRTG I+ VA+++P+ + G +V ATLHN Sbjct: 297 GYTSKFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYATLHN 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ +RI D++ I +AGDVIP V V LS+R ++ T+CP C S + R Sbjct: 357 FDFIKEKDIRINDEIKIYKAGDVIPYVDGVDLSKRLANSVPYESITNCPSCQSVLVREND 416 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C E + +FVSR M+++GM D II++ + + ADL+ L Sbjct: 417 EVDQRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYYLQKH 476 Query: 481 K---LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K L ++ KS N++N++ +K + L A GIR VG A LA F T+ Sbjct: 477 KEFILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGIRHVGPNLAKKLAKQFKTMTT 536 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP---IVINAEEI 594 L A+ EL V G A + N+F ++ N +++++L GV+ I + I Sbjct: 537 LMHANFGELTNVDACGEKAALSLINWFNDDHNVSLVNQLQQVGVNMEYIDDFIYDDNINI 596 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + KT V+TGS S +SRD+ K L + AKV SVSKKTD V+AG AG+KL KA+ Sbjct: 597 IDEYKNKTFVITGSFS-ISRDEIKTILEKYYHAKVKNSVSKKTDYVLAGIEAGTKLEKAK 655 Query: 654 ELGIEVIDEAEMLR 667 LG+++I E E + Sbjct: 656 LLGVKII-ENEFWK 668 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 249/671 (37%), Positives = 381/671 (56%), Gaps = 18/671 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + + L L + Y+ MD P DAEYDRL EL ++E HPE SP+ Sbjct: 1 MFDLRARYLHLVGELTMLNHHYYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSN 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG L F + H +P+ SL+ + F + V+ N T+ E K+DGLA Sbjct: 61 RVGGEVLDKFEKKEHTMPLYSLEKSQTYDGVRKFVEDVKREFPNA---TFTIEQKMDGLA 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + Y G TRG G GE ++ ++TIR+IPL + + +E RGEVF+P +G Sbjct: 118 NVLRYSGGSFSEGRTRGTGKIGEIVSEQIKTIRSIPLNIRFQ---GVIEPRGEVFMPISG 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE N G NPRN AAG+LR LDPRI A RPL F Y + EG +T Sbjct: 175 FEAYNASLPE-GEAPLKNPRNGAAGALRNLDPRIAASRPLDAFWYDIAYSEGITF-ETQA 232 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + ++ G ++ + +S + ++ +++E RPTL +DIDG+VIKVN L +E+L Sbjct: 233 EMMTFLQEQGFKINPYFYVTDSIDVIIEKLEEMKEVRPTLNWDIDGMVIKVNELHIREEL 292 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++ P+WA+A+KF A E+ T + V ++VGRTG +TP+A LEPV + G V+ ATL+N Sbjct: 293 GYTSKFPKWAIAYKFEAVEETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNN 352 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D+I R G+++G +V +RR+ DVIP+++ +V + E+V PTHCP C + + + Sbjct: 353 YDDILRKGVKVGAEVFVRRSNDVIPEIMGIVEG---SEGTEIVPPTHCPECETVLVQ--D 407 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH-TPADLFKLTA 479 A RC C AQ HF SR AM++D +K +QL E + + DL++L Sbjct: 408 GAHLRCMNIDSCSAQSVGKFTHFASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDR 467 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L+R G + A ++ A+E++K T F+YALG+R G+ TA L Y+ ++ + Sbjct: 468 NELLKLDRFGERKADRLLAAIEESKSRTLEAFIYALGMRHSGKGTAERLLRYYNNIDDIA 527 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS+E+L ++ D+G VA + ++F E N +I EL A G+ +++ + Sbjct: 528 NASVEDLMRIEDIGSAVAQSIFDYFHNERNLQMIEELKALGLTLTHVAAVSS---GNQLE 584 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T V+TG +S+ R + +A + E G K +GS+SK T+ ++AGEAAGSKLAKAQ LG+ V Sbjct: 585 GNTFVITGKVSR-PRKEIEAFIKEHGGKASGSISKNTNYLVAGEAAGSKLAKAQSLGVTV 643 Query: 660 IDEAEMLRLLG 670 I E ++ +++ Sbjct: 644 ITEEQLYKMVN 654 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 297/681 (43%), Positives = 399/681 (58%), Gaps = 28/681 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L EL L + Y+ DAP + DA YD L RE L HP+L +V Sbjct: 13 DPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAA---LDQV 69 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAV 121 GAAP AF ++RH +PMLSLDNVF+ F+ F ++ L + + E K+DGL++ Sbjct: 70 GAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSI 129 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YEN V ATRGDGT GED+T N+RT+R +P L ++ P +E+RGEV++ + F Sbjct: 130 SLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLP-DDAPDFIEIRGEVYMTKTDF 188 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N+ R FANPRNAAAGSLRQLDP +TA R L+ F Y G + +TH Sbjct: 189 ITLNQGQARQ----FANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQA-VGETHWD 243 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L ++WG PV+ S F + E R L +DIDGVV K++ LA QE+LG Sbjct: 244 YLAILRRWGFPVNPLAERV-SEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLG 302 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F RAPRWAVA+KFPA+ +T + ++ QVGRTGA+TP ARL+PV+V GVLVS+ATLHN Sbjct: 303 FAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNE 362 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 DEI R +RIGD V ++RAGDVIPQ++ + RP D+ VFP HCPVCG+ R GE Sbjct: 363 DEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGE 422 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TA 479 V RCTGGL C AQ E L HF SR A D++GMG+K + + ++ +PAD+F L Sbjct: 423 VVRRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDRE 482 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LE G SA+ ++ A++ + + ARF+YALGIR +GE A LA ++ + Sbjct: 483 AAIAALEGWGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWR 542 Query: 540 AASIE----------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 E EL + +G +A + FFAE NR+++ L+ I Sbjct: 543 RQMEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLV-----PMLTIED 597 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 AGKT+V TG+L ++R +AKAR LGA+V SVSKKTD V+ G AGSK Sbjct: 598 EVAAAGGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKA 657 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 AKA LG+ V+ EAE L G Sbjct: 658 AKAASLGVTVLSEAEFRSLAG 678 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 271/684 (39%), Positives = 391/684 (57%), Gaps = 29/684 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++L +L L+ H+ LYH DAPEI DA+YD L++E REL K PEL + Sbjct: 4 NDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDYEGV 63 Query: 62 VGA-APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWC--CELKLDG 118 +GA A +I H PMLSL+N F + F RV+ L + +V+ CE K+DG Sbjct: 64 IGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPKIDG 123 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+ + LYE G L+ ATRG+G GEDIT+ + IR +P K+ N P LEVRGE+++ Sbjct: 124 LSFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKI--ANAPEVLEVRGEIYMHH 181 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 + FEK+ + FANPRNAAAGS+RQL+P+I +R L + Y + + Sbjct: 182 SDFEKLKDVCN------FANPRNAAAGSIRQLNPKIAEERNLRYVAYCIVNSALA----S 231 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L Q +WG V ++ ++ L+F+ ++ R TLG+DIDG+V KVN Q+ Sbjct: 232 QEAILKQLAEWGFCTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQK 291 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG ++ PRWA A KFP+ E +T +RD+ QVGRTG ITP+A LEP+++ G LVS A+L Sbjct: 292 LLGSTSKYPRWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASL 351 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT--REVVFPTHCPVCGSDVE 416 HN +EI R +RIGD V+++RAG+VIPQVV V + R E VFP+HCP CGS + Sbjct: 352 HNLNEIARKDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFPSHCPSCGSTLS 411 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GE RCT L C AQ E +KHFVSR +++ G+G+K I+ Y+ AD+F Sbjct: 412 RAPGEVAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFS 471 Query: 477 LTAG----KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 L L+ G KS ++NA+ + + F++ALGIR +G+ A +A ++ Sbjct: 472 LREKISHMNLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHY 531 Query: 533 GTLEALEA-----ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 + A A+ E+ + +G+ + FF+ E N V+ L + Sbjct: 532 RSYSAWVRAMTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEKLNILNE-- 589 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 I E SP +GKT+V TG L MSR++A LGAKV +V+ KTD+++AG +GS Sbjct: 590 -IANTETASPISGKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGS 648 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 KL A++LGI+V++E+E LL + Sbjct: 649 KLDTARKLGIQVMNESEWKDLLKT 672 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 261/670 (38%), Positives = 394/670 (58%), Gaps = 17/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + TL+ Y Y+V+D P + D EYD+L E+ E E KHP+ I P SPTQ Sbjct: 1 MIKDYNDYKKAVDTLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG L F + +H M S+++VF+E+ FL + RV+ L +E ++ E K DG + Sbjct: 61 RVGDVVLEGFEKAKHLSRMWSMEDVFNEKDFLDWVGRVKRIL-GHENFSFYIEPKFDGAS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++++YENG L+ A TRGDG GED+T N +TI +IPL++ +++ +E+RGEV + + Sbjct: 120 LNLIYENGKLIRAETRGDGEIGEDVTLNAKTINSIPLEIKEKSL---IEIRGEVVIKKDD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+K+NE+ + G FANPRNAAAGSLRQLDP+ITAKRPL F+ +GVGV + + Sbjct: 177 FDKLNEERLKNGEPTFANPRNAAAGSLRQLDPKITAKRPLIFYPWGVGVNSLN--YERYS 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + G + +C+ V Y + + R + +DG+V+K++ + + L Sbjct: 235 ELMDYIYSLGFKEPPKRGVCKDIPCVEKKYDEFVKLRDSFEVMLDGMVVKIDEIKYHDIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ + PRW VA+KFPA E+ T + DV QVGRTG +TPVA L+PV + GV+V ATLHN Sbjct: 295 GYTQKYPRWMVAYKFPAIEKETIIEDVIVQVGRTGVLTPVAVLKPVEIGGVIVERATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEIER+ +RIGD V++ R+GDVIP++ V+ +R D + + PTHCPVCG++V ++ Sbjct: 355 FDEIERMDIRIGDHVIVIRSGDVIPKITKVLTWKRKGDEKPIPRPTHCPVCGAEV--LDE 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 A+ +C L C A+ ++ +F S+ +D++G+G+ + L E V DLF+L Sbjct: 413 GALIKCQN-LSCPARVVNTIIYFASKNCLDIEGLGESVAKLLYEHGLVKDVTDLFELKVE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L K A+N+VNA++ RF+ ALGI +GE + + FG Sbjct: 472 DLEKLPLFARKKAENLVNAIKSKVGVECWRFVNALGIEHIGEVASKKICEKFG--VEFYK 529 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 + EE +++ G + + + N+ I +L+ E +PF G Sbjct: 530 HAPEEFEEIEGFGPEMVKSIAEYIRV--NKEKIEKLIE---ILKPKNPEKKEVQKTPFTG 584 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG++S+ R + K L ++GAKV+ SVSKKTD VI GE AGSK KA++LG+ ++ Sbjct: 585 KTVVLTGTMSK-PRSEIKKMLEDMGAKVSSSVSKKTDFVIYGEDAGSKYDKAKKLGVNLL 643 Query: 661 DEAEMLRLLG 670 E +M ++L Sbjct: 644 SEDDMWKMLK 653 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 257/665 (38%), Positives = 380/665 (57%), Gaps = 22/665 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +++ E TL Y+ DAP D EYD L ++ E E +P I+ SPT+RVG Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + RH V M S++++F E LA+ KR + E + + + K DG ++++L Sbjct: 63 EVSDGFVKARHSVRMWSMEDIFSFEELLAWLKR-----GDKEGLEFALQPKFDGASLNLL 117 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG LV A TRGDG TGED+TSN + I+ IPL++ R+E+RGEV + + F++I Sbjct: 118 YENGALVRAITRGDGITGEDVTSNAKVIKNIPLQIAYN---GRIEIRGEVVIAKNDFDEI 174 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G +NPRNAAAGSLRQLD +TA R L F +G G E +T+ + Sbjct: 175 NFARAQRGEPQLSNPRNAAAGSLRQLDSAVTASRRLRFKPWGYG--EQNLGLETYSQMMD 232 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 G + +C +AE++ Y ++ R + F +DG+V++V S+A E+LG+ Sbjct: 233 FIYSQGFEREEFFKICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTE 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + P++ VA+KFPA E+ T + DV FQVGR+G +TPV LEPV++ G V +ATLHN DEI Sbjct: 293 KFPKFMVAYKFPAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEI 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ERLG++ GD + I R+GDVIP++ V R + P CPVCGS + ++ Sbjct: 353 ERLGVQKGDFISIIRSGDVIPKITGVFKQRRDGSQMPIERPRECPVCGSML--LDEGVFV 410 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ SL HF S++ +++DG+G+ I++QL E V AD+++LTA L Sbjct: 411 KCQN-LECKARVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLAS 469 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE K N++ A+E ++ F+ +LGI +GE A +A + + S Sbjct: 470 LEGFKDKKIANLLGAIEASRTPALHSFIASLGIEHIGEVAAKKIAQIYP--QNWRELSFG 527 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 E+ + G +A F NR + E+L + +P E S +GKT V Sbjct: 528 EVAAIEGFGEAMAESYAEFMQV--NRQNLDEILR----FVSPQAQIYETKQSAISGKTFV 581 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 +TG+LS+ SRD+ K L GAKV+GSVSKKTD V+ G+ AGSKL KA+ELG++ I E E Sbjct: 582 ITGTLSK-SRDEFKRVLEANGAKVSGSVSKKTDFVLYGDEAGSKLDKARELGVKAITEDE 640 Query: 665 MLRLL 669 + R++ Sbjct: 641 LRRMI 645 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 256/687 (37%), Positives = 390/687 (56%), Gaps = 24/687 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ + L L+ ++ Y+ + P + DA+YD L ++ K P L + +++ Sbjct: 17 DHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDHSKK 76 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P A FS++ H PMLSL N F E F ++Q+ LK + CE K+DGL+ Sbjct: 77 VGFTPSAQFSKVVHLKPMLSLANGFCVEDISNFITKIQNFLKIDHCPKIVCEYKIDGLSF 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + YE GVL A+TRGDG GE+IT N++TI++ P L + EVRGE+++ F Sbjct: 137 NARYEYGVLTLASTRGDGQIGENITENLKTIQSFPQTLPITD--KVFEVRGEIYITNNDF 194 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N ++ G +F+NPRNAAAGS+RQLDP ITA+RPL +F Y +G + T Sbjct: 195 RVLNIQQQKLGKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFASTQFE 254 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + + V+ L ++ ++ FY+ V +R L F+IDGVV KVN A QE+LG Sbjct: 255 LLQKLSQLKFSVNTDYILSDNLHSMIEFYNNVATERNNLAFEIDGVVYKVNDFALQERLG 314 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR+A+A+KFPA T + ++ QVG+TGA+TPVA L P+++AGV +S ATLHN Sbjct: 315 ATSTSPRFAIAYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVTISRATLHNK 374 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE-VVFPTHCPVCGSDVERVEG 420 EIE +RIGD V + RAGDVIP++ V LS R + E +FPT CP C ++ EG Sbjct: 375 QEIESKDIRIGDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSCNQNLVVNEG 434 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 E VARC L C AQ E + HFVS+ A+++DG+G + I L++ +Y+ D+F L Sbjct: 435 ETVARCGNSLACQAQIYERICHFVSKDALNIDGLGKQRIQFLLDNKYIVNIVDIFLLEEN 494 Query: 480 ------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 KL + G KS + + +AK +F+YAL I+ VG+ +A LA F Sbjct: 495 NKFLYSNKLEDIAGWGIKSVNKLFQNINQAKNVILDKFIYALAIKHVGKYSAKLLAKEFK 554 Query: 534 TLEALEAASI----------EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 T + S+ E+L+ + VG+ A + FF +N N+I++L+ Sbjct: 555 TAKNFINQSLKLANNATEIYEKLRNIEGVGVKTADQLKQFFMVSANVNLITKLVNILTIQ 614 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + + + +T+V TG+ + +SR + K + +LGAKV VS TDL++ G Sbjct: 615 DWQYHGD----NLLLSNQTIVFTGTFATVSRSEIKVQAEKLGAKVGTQVSNNTDLLVVGN 670 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AG+KL KAQ+LGI++I+E E ++++ Sbjct: 671 KAGNKLQKAQQLGIKIINEEEWIKMVN 697 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 276/741 (37%), Positives = 379/741 (51%), Gaps = 73/741 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E+ ++ LRT + H Y+ DA + DAEYD L+ EL LE HP L + DSPTQ Sbjct: 23 LEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLRSQDSPTQ 82 Query: 61 RVGAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG F+ + H MLSLDNVF EE + +V+ + +V + ELK+DGL Sbjct: 83 TVGGRAETTLFAPVTHAERMLSLDNVFSEEELAEWAAKVERDAGSG-RVRYLSELKIDGL 141 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+++ YE+GVLV+AATRGDG GED+T NV T+ +P +L G P +EVRGE+F P A Sbjct: 142 AINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPPLVEVRGEIFFPVA 201 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR---------PLTFFCYGVGVL 230 F+++N G +VFANPRNAAAGSLRQ + + R L +G+G Sbjct: 202 EFDELNARQLEVGERVFANPRNAAAGSLRQKEEGKSPARLELMRARIRRLRMLVHGIGAW 261 Query: 231 EGGELPD-----THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 EL WGLP+S + + EV F + R + ID Sbjct: 262 PVRELASDAHVSAQSEVYGLLAGWGLPISTHFRVFDDISEVTEFVRRHGAHRAEVEHQID 321 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 G+V+KV+ L E+LG +RAPRWA A+K+P +E T + D+ VGRTG TP A +E Sbjct: 322 GIVVKVDDLGLHEELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRATPFAVMEK 381 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V VAG V ATLHN ++ G+ IGD VV+R+AGDVIP+V+ V+ R RE V P Sbjct: 382 VEVAGSEVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFVMP 441 Query: 406 THCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 T CP C + + EG+ RC C AQ + ++H SR A+D++G+G+ L + Sbjct: 442 TLCPECQTPLRPAKEGDIDLRCPNARSCPAQVRGRVEHVASRGALDIEGLGEVAAAALTQ 501 Query: 465 K-----EYVHTPADLFKLTAGKLTGL---------------ERMGP-------------- 490 + T A LF+LT L + E+ G Sbjct: 502 PLEPEDPPLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTPFRRRRAPK 561 Query: 491 -------------------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 KSA+ ++ L+KAK R L AL IR VG A LA + Sbjct: 562 RDGVFDPAAPWGDEDSVPSKSAEVLLENLDKAKTQDLWRILVALSIRHVGPVAARALAGW 621 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP---APIV 588 FG+L+A+ +AS EEL V VG ++A + ++F + +R ++ GV P Sbjct: 622 FGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWHREIVDRWRKAGVVMEVPGHPGP 681 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 A AG TVV TGSL +R+ A ++ G K SVSKKT V AG AGSK Sbjct: 682 GAAAAAGGVLAGLTVVATGSLEGYTREGALEAIMAAGGKAGSSVSKKTHYVAAGPGAGSK 741 Query: 649 LAKAQELGIEVIDEAEMLRLL 669 L KA+ LG+ +ID AE L+ Sbjct: 742 LGKAEALGVRIIDAAEFRLLV 762 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 255/665 (38%), Positives = 381/665 (57%), Gaps = 13/665 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 L T L H+ Y+ ++ P I D YD MREL+E+E +HPE SPT +G Sbjct: 6 RDDYIALCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMYLGD 65 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 P F + H PMLS+ NV+ + F R + L + + ELK+DG+AV+I Sbjct: 66 RPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPG--YSLELKIDGIAVAIR 123 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE + A +RG+G GEDIT+NV TIR++P++L E P LEVRGEVFL FE++ Sbjct: 124 YEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEA-PEDLEVRGEVFLSYEAFEEL 182 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N R G FANPRNAA G+L+ L + AKR L YG+ + +H L Sbjct: 183 NACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLI---TDQKKRSHFENLQ 239 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +WG V+ C S +EV+ ++EE R L IDGVVIKV+++A Q++LG + Sbjct: 240 LCSQWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTS 299 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + RWA+A+K+ + T + D+ QVG+TG +TPVA L PV ++G VS A+L+N DEI Sbjct: 300 KHYRWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEI 359 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 E+ +RIGD V + + G+VIP++V + L++R ++ P+ CPVC V + + Sbjct: 360 EKKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKE--KVSV 417 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC L C E + F S+ A+++D +G+K++ +L E + + +D+F LT L Sbjct: 418 RCINPL-CSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQ 476 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 + +S QN++ ++ AK+ R L AL I VG + A LA +FGTL+ + AS++ Sbjct: 477 VPGFKDRSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLD 536 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 EL + +G VA+ + FF++ NR I + GV ++ + ++P GK V Sbjct: 537 ELMSIEGIGPKVAASIVAFFSKHENREEIRRMQELGVQ----VLSKQSDKEAPLQGKVFV 592 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG+L QM+R A+ R+ LG KV+ SVSK T VIAG AG KL KAQ+LG+ + +E++ Sbjct: 593 LTGTLQQMTRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESK 652 Query: 665 MLRLL 669 + R+L Sbjct: 653 LSRIL 657 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 240/686 (34%), Positives = 390/686 (56%), Gaps = 34/686 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I ++ LR L + Y Y+ ++ P + D EYD ++EL +LET++PE +P+SP+++ Sbjct: 20 KEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPSKK 79 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F++++HE+PM+SL N FDEE L F+ ++ + +++ ++ E K+DGL++ Sbjct: 80 VGGYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSD-FSYVVEPKIDGLSI 138 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y++G L+ A TRGDG GED+T N++TI+++PL + LE+RGEVFL + F Sbjct: 139 SVKYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIE---YDKDLEIRGEVFLTKKDF 195 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN D T K FAN RNAA+GSLR LD ITAKR L+ Y V ++ Sbjct: 196 EKINSDPNLT--KKFANARNAASGSLRNLDSNITAKRNLSALFYYVPKATELKIAK-QYD 252 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K +P+S + C + + V+ ++ + R +DIDG+VIKVN E++G Sbjct: 253 VLSWLDKQLIPISREIRHCNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIG 312 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + ++ P+WA+A+KFPA + T + ++ VGRTG I +A L+ + + G V ATLHN Sbjct: 313 YTSKFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNY 372 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I+ + + D V I +AG++IP+++ + +R PT+CP C S + + E E Sbjct: 373 DYIKDHEIMLNDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPEPTNCPSCDSKLVKKEQE 432 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL---- 477 C C ++ + +++F SR AM+++G+ II QL + ++ DL++L Sbjct: 433 VDLYCLN-ENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHKK 491 Query: 478 -----TAGKLTGLERMG-----------PKSAQNVVNALEKAKETTFARFLYALGIREVG 521 T K G KS N++ A+EK+K + +FL LGI+ VG Sbjct: 492 EILIATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYVG 551 Query: 522 EATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 A L+ F ++E L A+ EE+++VPD G ++ + N+F++ N++++ G+ Sbjct: 552 LRAAKALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQDLLWRAKKVGI 611 Query: 582 HWPAPIVINAEEIDS---PFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTD 637 ++ N + + + KT V+TGS ++ SR++ K + AKV+ SVSKKTD Sbjct: 612 NFNYINEFNDVVVKNEHQKYMNKTFVITGSFNK-SRNEIKNYIESVFNAKVSDSVSKKTD 670 Query: 638 LVIAGEAAG-SKLAKAQELGIEVIDE 662 ++ GE AG SKL KA +L IE+I E Sbjct: 671 YLVVGENAGDSKLKKANDLKIEIITE 696 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 278/678 (41%), Positives = 402/678 (59%), Gaps = 22/678 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +++ EL L + Y Y+V+D P + D +YD+ EL+ LE + ++ P SPT Sbjct: 1 MVDKIERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKE-TGVVLPYSPTL 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR-------VQDRLKNNEKVTWCCE 113 R+G L F++ H+ + SLD + ++ R ++ + ++ + + Sbjct: 60 RIGDIVLDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIAT 119 Query: 114 LKLDGLAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 K DGL V++ Y E G+L +ATRG+G GE++T+ V+TI++IPLKL + EV G Sbjct: 120 KKFDGLTVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENH--DLFEVHG 177 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E + Q FEK N A N RN AAG+LR L+ + TA+R L+ F Y VG EG Sbjct: 178 EAIMTQEAFEKYNSSA----DSPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEG 233 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 + T+L + K+ GLPV D + +C S E++ +E+ R L +DIDG+VI ++ Sbjct: 234 YQF-KTYLEMMDFIKEKGLPVDDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAID 292 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 + +E LG+ + P+WA+A+KF AQE T + DVE+ VGR+G I P A LEPV +AGV Sbjct: 293 DIRTRELLGYTVKFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVT 352 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V ATL+N D+I+R G+RIG V IRR+ DVIP+++ L E++ E+ PT CP CG Sbjct: 353 VKRATLNNMDDIKRKGVRIGADVFIRRSNDVIPEIMG-TLENTLENSEEIFPPTECPACG 411 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S V A C L C Q +++ H+ SR AM++ G +K +QL EK + + + Sbjct: 412 SHVVL--NGAHYFCENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSIS 469 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL+KL L LE+ G K A+N++NA+E +KE F+YALGI VG TA + F Sbjct: 470 DLYKLKKEDLINLEKFGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKF 529 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +++ L+ A+ EEL V DVG +VA + FF EE + I ELL+ GV+ PI + Sbjct: 530 KSIDGLKNATFEELVSVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVN---PIFDEVK 586 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 ++S F KTVV TG+L SR + K +L LGAKV+GSVSKKTD VIAGE+AGSKL KA Sbjct: 587 IVESIFKDKTVVATGTLQNYSRTEIKTKLESLGAKVSGSVSKKTDYVIAGESAGSKLTKA 646 Query: 653 QELGIEVIDEAEMLRLLG 670 +ELG+EVI E E ++LG Sbjct: 647 EELGVEVISEEEFEKMLG 664 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 266/679 (39%), Positives = 392/679 (57%), Gaps = 24/679 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +++ EL L + Y Y+V+D P I D EYD EL LE K E+ P SPTQ Sbjct: 1 MDNKLEKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN--------EKVTWCC 112 RVG L FS+ H+ + SLD + E + ++ R ++ ++ + Sbjct: 60 RVGDKILGEFSKYTHKGRLWSLDKAQNMEQLIEWHNRNLKVIEQYNSMSEDKLPELRYIV 119 Query: 113 ELKLDGLAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 K DGL V+ Y ENG+L+ +ATRG G GEDIT+ ++TI+ +PLK+ +EV Sbjct: 120 TKKFDGLTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNS---YVIEVH 176 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GE + + FE+ N+ A+ N RN AAG+LR LD + TA+R L+ F Y VG E Sbjct: 177 GEAIMTKTAFEEYNKAAQV----PLKNLRNGAAGALRNLDIKETARRNLSAFFYDVGYNE 232 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G E ++ + + GLP + C + EEV +E R L +DIDG VI V Sbjct: 233 GPEF-KSYREMMNFIRNMGLPQDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGAVIVV 291 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + + +E LG+ + P+WA+A+KF A+E T + DVE+ VGR+G +TP A LEPV + GV Sbjct: 292 DDIKTREILGYTIKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVELGGV 351 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V ATL+N D+I+R +++G KV++RR+ DVIP+++ VV E++ E+ P CP C Sbjct: 352 TVKRATLNNMDDIKRKNVKLGAKVLVRRSNDVIPEIMGVVEES-LEESEEIQAPDRCPYC 410 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 S + + C L C Q +S+ HF SR AM++ G +K +QL EK + + Sbjct: 411 NSHLVQ--NGVHYYCENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLDIKSI 468 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 ADL+K+ +L LE+ K +QN+++A++ +K A F+YALGI VG+ TA L Sbjct: 469 ADLYKIKKEELLTLEKFKDKKSQNLIDAIQNSKNCDLASFIYALGIPNVGKKTANDLVMK 528 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 F TLE+++ +IE+L +VPDVG +VA +++FF +E + I ELL GV P Sbjct: 529 FKTLESIKNTTIEQLVEVPDVGEIVAKSIYDFFEDEKIISNIEELLNLGV---KPYYEEE 585 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 ++PF KT+V+TGSL+ SR + K +L LGAKV+ SVSK TD V+ GE GSK K Sbjct: 586 RIDENPFMDKTIVVTGSLNNYSRGEIKDKLQSLGAKVSSSVSKNTDYVLVGEKPGSKYEK 645 Query: 652 AQELGIEVIDEAEMLRLLG 670 A ELG++VI+E E + Sbjct: 646 AIELGVKVINEEEFSNKIK 664 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 301/631 (47%), Positives = 390/631 (61%), Gaps = 40/631 (6%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + E + LR L + + Y+V+D P +PD EYDRL REL LET+HPEL TPDSPT R Sbjct: 15 DRPEARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPTLR 74 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRLK---NNEKVTWCCELKL 116 VG A L F+ +RH +PMLS+ D + AF+ V+ L + V + ELK Sbjct: 75 VGGAVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAELKF 134 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEV 174 DGLA+++ YE G LV AATRGDGTTGED+T N+RTIR IPL L + +P LEVRGEV Sbjct: 135 DGLAINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRGEV 194 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-GG 233 ++ + FEK+N R G K F NPRN AAG++RQLDP++ A+RPL+FF YG+G + Sbjct: 195 YMRRDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVAGWK 254 Query: 234 ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 +P TH L + +G PVS+ E ++ F+ + R +L FDIDGVV KVNS Sbjct: 255 GMPGTHSSMLDVLQAFGFPVSNERAAVAGGEGLVRFHEAIRAKRDSLPFDIDGVVYKVNS 314 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 LA Q +LGF +R PRWAVA K+PAQE +T V ++ QVGRTGAITPVARL PV V GV V Sbjct: 315 LALQRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITPVARLVPVFVGGVTV 374 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP---------------ED 398 +NATLHN DE+ R +R+GD V++RRAGDVIP+VV+VVL RP Sbjct: 375 TNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPLDDVPGSDLFNPQQQPK 434 Query: 399 TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458 P CPVCGS V R EGEAVARC+GGL C AQRKE+++HF RR MD++G+G++ Sbjct: 435 YPPFELPKTCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLGERY 494 Query: 459 IDQLVEKEYVHTPADLFKLTAGKLTGLERMGP-----------------KSAQNVVNALE 501 ID LVE +YVH ADL+KLT ++R K A+N++ ++ Sbjct: 495 IDNLVELDYVHGIADLYKLTLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLEGIQ 554 Query: 502 KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVH 561 +K ARFL+ALGIR VGE+TA LA + G+L + A L +PDVG VA + Sbjct: 555 ASKTPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPAPLLLALPDVGATVAEAIA 614 Query: 562 NFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +FFAE N+ + LL GV NA+ Sbjct: 615 DFFAEPKNQQALDALLEAGVAPQGEHAPNAK 645 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 33/250 (13%) Query: 448 AMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKET- 506 A+ + +G+ L + ++ + A + + A L L +G A+ + + + K Sbjct: 567 ALGIRHVGESTAKTLAD--WLGSLAMIRRAPAPLLLALPDVGATVAEAIADFFAEPKNQQ 624 Query: 507 --------------------------TFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 A LG+ ++ A LA TL L + Sbjct: 625 ALDALLEAGVAPQGEHAPNAKLREKLEPAELYATLGVPKLTATRAKQLAVAAPTLAQLAS 684 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ++L +P V + + + A +R +++L A A + + G Sbjct: 685 VEPDQLAGLP---ADVTASLLEWLASHDHRAQLAKLDALRGELLAAMPA-EAAEEGVLDG 740 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG+L ++RD+AKA L GAKV+GSVSKKTD V+AGE AGSKLAKA+EL ++V+ Sbjct: 741 KTVVLTGTLPNLTRDEAKAMLEAAGAKVSGSVSKKTDYVVAGEDAGSKLAKAEELNVKVL 800 Query: 661 DEAEMLRLLG 670 DEA ML LL Sbjct: 801 DEAGMLALLK 810 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 274/796 (34%), Positives = 389/796 (48%), Gaps = 129/796 (16%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ ELR + + Y+ D+P + DAEYD + EL LE HP L TP+SPTQR Sbjct: 14 QAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAHPALATPESPTQR 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A + F+ + H MLSLDNVF + ++ RV L + V + E+K+DGLA+ Sbjct: 74 VGGAAASGFTTVEHVERMLSLDNVFSVDELRDWDARVARDLGAGD-VGYLAEVKIDGLAI 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++LYE+G L AATRGDG TGED+T N I +P +L GE PA +EVRGE+F+P A F Sbjct: 133 ALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEVRGEIFIPTASF 192 Query: 182 EKINEDARRTGG---------------------------KVFANPRNAAAGSLRQ-LDPR 213 ++NE FANPRNAAAG LRQ LD + Sbjct: 193 TRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAAAGGLRQQLDKK 252 Query: 214 ITAKRP--------LTFFCYGVGVLEGGELPDT----HLGRLLQFKKWGLPVSDRVTLCE 261 +R L + +G+G L+ F WGLPVS + Sbjct: 253 DGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWGLPVSPHNRVVN 312 Query: 262 SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQM 321 + V+ R + ++DG+V+KV++L Q++LG +RAPRWA+A+K+P +E Sbjct: 313 GIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRWAIAYKYPPEEVN 372 Query: 322 TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAG 381 T + ++ VGRTG TP A +EPV VAG V ATLHN D + G+R+GD VV+R+AG Sbjct: 373 TRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGVRVGDVVVLRKAG 432 Query: 382 DVIPQVVNVVLSERPED--TREVVFPTHCPVCGSDVE-RVEGEAVARCTGGLICGAQRKE 438 DVIP+++ V + + + V P CP CG+ + EG+ RC C AQ + Sbjct: 433 DVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRCPNARSCPAQVRG 492 Query: 439 SLKHFVSRRAMDVDGMGDKIIDQLVEK-----EYVHTPADLFKLTAGKLTGLERM----- 488 ++H SR +DV+G+G+ L + + T A LF LT +L + + Sbjct: 493 RVEHIGSRGGLDVEGLGEVAAAALTQPLEPADPPLDTEAGLFSLTIEELLPIRVVVRDPE 552 Query: 489 --------------------GPKSAQNVVNALEKAKETTF-------------------- 508 G VV ++ E T+ Sbjct: 553 TGLPRPYDGVGESAELPTADGATFTAKVVRPFQRLVERTYPPGTETMTPAERRKAGIRKD 612 Query: 509 -------------------------ARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 R L +L IR VG A LA +FG+L+A+ AAS Sbjct: 613 HPVYGPAKSAQVLLDELDRAKTKDLWRQLVSLNIRHVGPVAARALADWFGSLDAIRAASS 672 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI--------- 594 EEL V VG V+ + + +F + + +++ GV + P E + Sbjct: 673 EELAAVEGVGPVIGAELQAWFDVDWHVDIVDSWTRAGVRFATPGHPGPEAMAAQAAAGAA 732 Query: 595 -DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 P AG TVV+TGSL +RD AK ++ G K AGSVSKKTD V+ GE AGSK AKA+ Sbjct: 733 PQGPLAGLTVVVTGSLDGFTRDGAKEAIIAAGGKSAGSVSKKTDYVVVGENAGSKAAKAE 792 Query: 654 ELGIEVIDEAEMLRLL 669 ELG+ V+DEA + LL Sbjct: 793 ELGLPVLDEAGFVALL 808 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 290/569 (50%), Positives = 392/569 (68%), Gaps = 3/569 (0%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L L EY Y+V+DAPE+PD+EYD++ R L+++E HPELI DSPTQRVG P Sbjct: 27 MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQRVGGKPA 86 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR--LKNNEKVTWCCELKLDGLAVSILY 125 F Q+RH VPMLSL N F++ LAF++RV++ L + + + + K DGLA+SI Y Sbjct: 87 DGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFDGLAISIHY 146 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 NG+ A TRGDGT GED+++NV+TIR++PLKL G +PA LE+RGE+F+ + F ++N Sbjct: 147 TNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMTKKDFLQMN 206 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG-VLEGGELPDTHLGRLL 244 + G KVFANPRNAAAG++RQLDP++ A RPL F+CYG E + + Sbjct: 207 QRQAELGLKVFANPRNAAAGTIRQLDPKVAASRPLRFYCYGAALEREQLRELKSQSAMMK 266 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 GLPVS+ AE +L+FY V R TL F+IDGVV KV+S Q+QLG+VA Sbjct: 267 WLAALGLPVSELSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSFDLQDQLGYVA 326 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APR+AVA KFP E ++ + ++E QVGRTG+ITPVA+LEPV V GV+VS+ATLHN DEI Sbjct: 327 KAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVSSATLHNLDEI 386 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R LR+GD+V++RRAGDVIP+V+ ++R + V PTHCP+C S V + EGEA Sbjct: 387 QRKDLRVGDQVLVRRAGDVIPEVLPFPGNQRSPVSSAFVMPTHCPICNSLVRKEEGEAAF 446 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RCTGGL+C AQ +S+ HF RRA+D++G+G K+++ LV+KE+V TPADLF+L L Sbjct: 447 RCTGGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADLFRLEFDALVQ 506 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LERMG KSA+N++++++KAK+TTF RFL+ LGIR VGEATA LAAYF +E L AS E Sbjct: 507 LERMGDKSARNLLDSIDKAKQTTFGRFLFGLGIRHVGEATARDLAAYFKNVERLMNASEE 566 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVI 573 EL +V +G+ NF + + Sbjct: 567 ELLEVTMLGLWWLHPYGNFLMNQPISKLF 595 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 276/699 (39%), Positives = 394/699 (56%), Gaps = 51/699 (7%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E + ++ T+LR + +H+ LYH PEI DAEYD+L ++L E+E + P TQ Sbjct: 4 LEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACV----TQ 59 Query: 61 R-VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VGAAP FS+I+H PMLSL+N +DE+ F R++ L E++ CE K+DGL Sbjct: 60 DGVGAAPDEKFSKIKHREPMLSLENAYDEQGVERFLSRIKRFLIE-EEIEVFCEPKIDGL 118 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 + S +YE+G V AATRGDG GED+T NV TI+ P L ++ RLEVRGE+++ + Sbjct: 119 SFSAVYEDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQ--DVQDRLEVRGEIYINNS 176 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F K+N+D FANPRNAAAGSL+QLD ITA RPL +F Y + G + Sbjct: 177 DFLKLNKDNE------FANPRNAAAGSLKQLDVSITANRPLKYFAYSLI----GGKEKSQ 226 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + + G V++ +L + +L FY+KV R +L +DIDG+V KVN L Q + Sbjct: 227 SEVLNRLESLGFCVNEHRSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSR 286 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +APR A+A+KF A T + + QVGRTG +TPVA L PV++ GVLVS A LH Sbjct: 287 LGSTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLH 346 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+R +R GD V I+RAGDVIPQ+V V R D VFP CP CG V + E Sbjct: 347 NQDEIKRKDVREGDIVTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKV-QAE 405 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF---- 475 G A RC+ L C AQ L HFVS+ A D+ G+G+K I + + D+F Sbjct: 406 G-AAIRCSEELTCKAQIIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEE 464 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L L G +S N++NA++ + T RF+++LGIR +G+ A LA Y+ + Sbjct: 465 RLNEFSLKEQPDWGERSIANLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSY 524 Query: 536 EALEAASI-----------------------EELQKVPDVGIVVASHVHNFFAEESNRNV 572 + I +EL + +G VA + +FF++E N + Sbjct: 525 NNWYNSMIKLLSNDAEVGVGGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKM 584 Query: 573 ISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 + +L + + +N+ +S K +V TG L MSR +AK R LGAKV+ ++ Sbjct: 585 LKDL----TDYLQILSVNSNSSNSVLNNKVIVFTGKLLTMSRGEAKVRAKALGAKVSSNL 640 Query: 633 SKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 S K D ++AGE G+K KA ELG+ +++E + R++ S Sbjct: 641 SAKIDYLVAGEKPGNKYKKAVELGVGILNEDQWYRMINS 679 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 243/679 (35%), Positives = 372/679 (54%), Gaps = 35/679 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++++ EL L H Y+ D+PEI DAEYD + +L +P L P V Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFP----VVV 57 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F +++H PMLSL N+F EE + + ++ + L + + CE K+DG++ S Sbjct: 58 GYPASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFS 117 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 Y NG LVS ATRGDG GE+I N++ I P+++ ++P LEVRGEVFL F+ Sbjct: 118 ARYVNGKLVSCATRGDGKIGENIIDNMKVINGFPIEIM--DVPDLLEVRGEVFLDHDTFQ 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 + + F+NPRNAAAGSLRQL+P IT +R L +F Y ++G E Sbjct: 176 TL---------EGFSNPRNAAAGSLRQLNPEITNERNLQYFAYSASKIDGIE---HQEDV 223 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L G + E+++FY V R + +DIDG+V KVN L +LG Sbjct: 224 LHFLSGRGFMTNPLRLASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGT 283 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ APRWA+A KFP+ T + ++ VGRTG ITPVA L+P+ + GV++S A+L+N D Sbjct: 284 LSDAPRWAIAHKFPSHRAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNED 343 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ER +R GD V++ RAGDVIP+V+ V +S R R +FP CP C S + R EA Sbjct: 344 ELERKDIREGDLVIVERAGDVIPKVLEVDISYRTNQER-FIFPDKCPSCSSTLIRKNNEA 402 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA--G 480 RC C Q + +KH VS +A D+DG+G I +EK ++ PAD+F+L Sbjct: 403 ATRCNNSKKCPEQVIQQIKHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRD 462 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 ++ + G KS +N++ ++ +++ + +F+++LGI+ +GE TA LA F + Sbjct: 463 EIKKYDGWGEKSVENILKNIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFD 522 Query: 541 ---------ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 + +E++ + +G + + +FF++ N N++ L I + Sbjct: 523 KMSMLKDDTQTEDEIRNLDGMGSCICESLLDFFSDSDNCNMVKSLSNH-----VMITDHT 577 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 I +GK V TG+L ++R++AK + + G V S+SK+ D V+AGE AGSKLAK Sbjct: 578 VNIGGSLSGKKFVFTGTLLSITREEAKEIIKKAGGIVVNSISKQIDYVVAGEKAGSKLAK 637 Query: 652 AQELGIEVIDEAEMLRLLG 670 A ELGI +I+E ++ Sbjct: 638 ANELGIAIIEEKTLIEFTN 656 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 269/672 (40%), Positives = 418/672 (62%), Gaps = 5/672 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT-PDSPT 59 M+ I+ + +L+ +R+H YLYH +++P+I D +YD L+ EL+ LE K + DSPT Sbjct: 1 MKDIKNYILKLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPT 60 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 Q VG+ L F + H PMLSL+NVF + FL F K++ + + EK+ +C ELK DG+ Sbjct: 61 QSVGSENLPEFKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNI-TVEKIFFCSELKFDGV 119 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A++++Y NG+L A TRG+G GED+TSNV I ++P KL G +IP LEVRGE+F+ ++ Sbjct: 120 AINLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIPETLEVRGEIFMLKS 179 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F+K+N + K+F+N RNAA+GSLR + ++T R LTF+CYG G D+H Sbjct: 180 DFKKLNVRLTKFKKKLFSNSRNAASGSLRHKNAKVTELRSLTFYCYGCGYCSYENFTDSH 239 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL + K WG P+SD L S +E+L FY+ ++ +R L F+IDG+VIKV+S+ Q+ Sbjct: 240 FLRLKKLKSWGFPISDYNFLHSSYDEILRFYNFIQNERYFLNFNIDGIVIKVDSICLQKS 299 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 L ++APRWAVA+KF + ++T + ++ +QVGRTG ITPVA++ P++++GVL+ +LH Sbjct: 300 LSTTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVAQVTPIYISGVLIKKVSLH 359 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EI RL L IGD V I+R+GDVIP ++ V + + ++ P CP CGS ++ Sbjct: 360 NFNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNEDISIPKFCPECGSKLKVDS 419 Query: 420 -GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 RC GL C +Q K+ L +F S++ +++ G+G KIID+LV+ YV +D+F L Sbjct: 420 FSNIKIRCMAGLKCLSQFKKLLHYFCSKKGLNILGLGPKIIDKLVDLGYVSDLSDIFDLN 479 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 LT +E +G +QN++ ++ +K +F++FL +LGI EVG A ++ YF TL+ Sbjct: 480 VSLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGIFEVGSIVARSISNYFFTLDKF 539 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +S EE + +G+ +A +++NF +E N+N+I +L + ++ + I + ++ F Sbjct: 540 MNSSKEEFLLINGIGVNIADNLYNFINDEFNKNIIFKLSKK-LNISSDINAIIDNNNTLF 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 K +V +GS S SR +LG V SVSK D +I G+ G KL KA++ I Sbjct: 599 R-KKIVFSGSFSNFSRSKIIELSKKLGIIVVSSVSKSVDYIIIGKKPGRKLIKAKKFSIP 657 Query: 659 VIDEAEMLRLLG 670 I E E L ++ Sbjct: 658 GIYEKEFLNIIN 669 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 248/670 (37%), Positives = 387/670 (57%), Gaps = 17/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +++ E L + Y+ +D + DA YD L +EL+ E K+P I +SPTQ Sbjct: 1 MIKSQKEYLERIAYLNTLSHHYYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VGA +F++ H + M SLD+VF++ A+ +R+ LK ++ C KLDG++ Sbjct: 61 KVGATATNSFNKNPHLMRMWSLDDVFNQSELQAWLQRI---LKTYPSASFVCSPKLDGVS 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LY++G LVSA TRG+G GE +T+N + I IP + +E+RGEV + + Sbjct: 118 LNLLYQHGKLVSATTRGNGLEGELVTNNAKHIANIPHFI---AYDGEIEIRGEVIISKED 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+ +N++ +FANPRNAA+GSLRQLD IT KR L F +GVG L + Sbjct: 175 FDALNKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFL--SFK 232 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L G + L ++ +E+ YH + +R +DG+VI VN L Q++L Sbjct: 233 ECLDFIVSLGFSAIQYLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKEL 292 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++P++A A+KFPA E+ T + V QVGR+GAITPVA LEPV +AG +++ ATLHN Sbjct: 293 GYTQKSPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHN 352 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EIE+ + + DKVV+ R+GDVIP+++ + + R ++++ P CP+C ++ + Sbjct: 353 YSEIEKKNIMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPKVCPICSHEL--LCE 410 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E C L C A+ KESL HF S+ A+++ G+GDK+I+QL E++ + DL+ L Sbjct: 411 EIFTYCQN-LNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLE 469 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L++ K AQN+++A++K+K R + ALGI +G+ + LA +G + Sbjct: 470 DLMRLDKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAK-YGL--NVLE 526 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 S E ++ G+ + + NF+A SN+ I L + + +E S F Sbjct: 527 KSEAEFLEMEGFGVEMVRSLVNFYA--SNQEFIRSLFELLNPKNSDMAEEKQESSSVFNN 584 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+VLTG+LS+ R + L LGAK+ SVS KTD +I GE AGSKLA A++ G+ V+ Sbjct: 585 KTIVLTGTLSK-PRQEYAQMLENLGAKITSSVSAKTDFLIVGENAGSKLALAKKHGVSVL 643 Query: 661 DEAEMLRLLG 670 +E E+L+ L Sbjct: 644 NEEELLKRLK 653 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 256/664 (38%), Positives = 376/664 (56%), Gaps = 22/664 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + TL Y+ D P D EYD L + + E ++PEL SPT+R+G Sbjct: 3 YDEYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A FS++ H M S++++FD+ LA+ R + + E K DG ++++ Sbjct: 63 AISEGFSKLAHGAQMWSMEDIFDDADLLAWLARGEKS-----GAQFYVEPKFDGASLNLT 117 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE GVL+SAATRGDG GED+T N R I+++PL++ R+E+RGE + ++ F+ + Sbjct: 118 YEGGVLISAATRGDGLIGEDVTQNARAIKSVPLQIP---YAGRIEIRGETLIAKSDFDAL 174 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N++ G +F+NPRNAAAGSLRQLD I AKR L F +GVG E H + Sbjct: 175 NDERAANGESLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVG--EHSLSFALHSQIME 232 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + G + +C+SA E+ A Y + R + +DG+VI+VN L++ Q+G+ Sbjct: 233 FVRSLGFLRDEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTV 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PR+ VA+KFPA E++T +R++ QVGRTGA+TPVA + V++ G VSNATLHN DEI Sbjct: 293 KFPRFMVAYKFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEI 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 RLGL D V I R+GDVIP++ +V R E+ P CPVCG + ++ A+ Sbjct: 353 ARLGLMKNDFVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKL--LDEGALI 410 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ SL +F S++ M+++G+ D I QL E + D++ L A L Sbjct: 411 KCQN-LDCKARVIGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLAD 469 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE K N++ A+ +K RF+ +LGI +GE A +AA FG + AS + Sbjct: 470 LEGFADKKISNLLGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFG--QDWLDASED 527 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 E+ ++ G +A + F + NR I L AP + + S F ++VV Sbjct: 528 EILRLEGFGEAMARSLAEFC--KINREKILNLSE----IIAPRAPQMQTVKSAFTDRSVV 581 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 +TG+LS+ RD+ KA+L+ +GAKV GSVS KTD V+AG AGSKL KA+ LG+ VIDE+E Sbjct: 582 ITGTLSR-PRDEFKAKLLAMGAKVQGSVSAKTDFVLAGAEAGSKLQKARSLGVRVIDESE 640 Query: 665 MLRL 668 L Sbjct: 641 FEAL 644 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 246/681 (36%), Positives = 377/681 (55%), Gaps = 33/681 (4%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + EL + +H LY+ D EI D EYD+LM++L+ E +HP+ + PDSP+Q++G Sbjct: 4 ETYQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGT 63 Query: 66 -PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A ++ H VPMLS+++VFD +S + + K+VQ+ + + E K+DGL++++ Sbjct: 64 TKREAGVKVEHNVPMLSIEDVFDFQSVIDWVKKVQE---MHPDAIFSVEQKIDGLSMTLR 120 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G L A TRGDG GED+T N R I +P KL + LE+RGEV++ + FE Sbjct: 121 YRKGRLELAETRGDGHIGEDVTQNARAIPQVPDKLPITDP--YLELRGEVYMTRDRFEAY 178 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + + ANPRN AAG+LRQLDP ITAKR L F + V E + L L Sbjct: 179 NARQEKDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNVQDGE-PHFMRSQLDNLD 237 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + GLPV+ ++A+EV+A ++ + R LG+DIDG V+K++ +A ++ A Sbjct: 238 RLSAMGLPVTYH-KRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVKIDQIAYRKDFPAGA 296 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE------PVHVAGVLVSNATL 358 + +A+K+P +E++ + + VGRTG +T + P + G VS ATL Sbjct: 297 KYSAGHIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSRATL 356 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I ++ + IG + ++G++IP++ V + P CPVCG ++E+ Sbjct: 357 HNQDYIRQMKIGIGGHYKLFKSGEIIPKLNGCVKEPK----AVFKAPQFCPVCGEELEQE 412 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE-------YVHTP 471 EG A RC C AQ ++ +F R MD+ G+G ++D L +++ Y+ + Sbjct: 413 EGTADIRCVNP-SCPAQISRTIAYFAGRSCMDIAGLGQTLVDALCQEKITGSETFYLTSY 471 Query: 472 ADLFKLTAGKLTGLERM---GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D+++L + + + R K+ ++ A+E +K R L LGIR VG +TAA L Sbjct: 472 VDIYRLREHRDSLISRGILGKEKNTDKILAAIEDSKSQRPTRLLAGLGIRNVGLSTAAAL 531 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 A + L L A E+LQ +PD+G A+ + +FFA E R ++++ A G+ P Sbjct: 532 MAVYPDLMDLMHAGFEDLQGIPDIGEKTAADIVHFFAHEDKRRMMADFRALGLTMRMP-- 589 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 EE AG T+V+TG L M R +AKA + + G K GSVS KTD ++AGEAAGSK Sbjct: 590 --EEEKTEALAGLTIVVTGKLPGMERSEAKALIEKNGGKCTGSVSGKTDYLLAGEAAGSK 647 Query: 649 LAKAQELGIEVIDEAEMLRLL 669 L KA+ LGI VIDE + L+ Sbjct: 648 LDKAKSLGIPVIDEEGLKALI 668 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 278/735 (37%), Positives = 387/735 (52%), Gaps = 71/735 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L T + Y+ +D + D EYDR++R L ELE HPEL + DSPTQ V Sbjct: 4 DARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQTV 63 Query: 63 GAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G F+ + H MLSLDNVF E+F A+ +++ +V + CELK+DGLA+ Sbjct: 64 GGRAQTTLFAPVEHAERMLSLDNVFSFEAFEAWAAKIERDAGR--RVDYLCELKIDGLAI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-PARLEVRGEVFLPQAG 180 ++ YENGVLV+AATRGDG GED+T N+R I AI +L G P +EVRGEVF P A Sbjct: 122 NLRYENGVLVTAATRGDGVVGEDVTENIRHIPAITQRLSGAGPFPPVVEVRGEVFFPVAK 181 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQL-DPRITAKRPL--------TFFCYGVGVLE 231 FE++N + + G +VFAN RNAA+GSLRQ + + A+R L +G+G Sbjct: 182 FEELNANQQAAGERVFANARNAASGSLRQKAEGKNPAQRRLMRDRLGRLRMLVHGIGAWP 241 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 + T G + WGLP S + + +E F + E R T+ +IDGVVIKV Sbjct: 242 NPPVA-TQSGVYELLRSWGLPTSAHGRVFGTVQEAADFIGRSAERRDTVEHEIDGVVIKV 300 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + L ++LG +RAPRWA+A+K+P ++ T + D+ VGRTG TP A +E V VAG Sbjct: 301 DELVLHDELGATSRAPRWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMEKVKVAGS 360 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V ATLHN D ++ G+ IGD VV+R+AGDVIP+V+ V+ R RE PT CP C Sbjct: 361 EVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFAMPTDCPEC 420 Query: 412 GSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY--- 467 G+ + EG+ RC C AQ + ++H SR +D++ +G+ L + + Sbjct: 421 GTPLAPAKEGDIDLRCPNAEFCPAQVRGRVEHIGSRGGLDIEALGEVAAAALTQPRFPER 480 Query: 468 --VHTPADLFKLTAGKL-----------TGLERMGP------------------------ 490 + T A LF L L TGL ++ Sbjct: 481 APLPTEAGLFGLRLEDLFPIEVVVRDSETGLPKLTETGVEKVDAPFRRRRQKKDGAFDPE 540 Query: 491 -------------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 KSA ++ L A+ R L +L IR VG A LA +FG+L+A Sbjct: 541 AEAFDGDEIAVPSKSAIELLANLRAARTKPLWRILVSLNIRHVGPVAARALADHFGSLDA 600 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI---NAEEI 594 + AAS +EL V VG +VA V ++F + ++ +GV + P A+ Sbjct: 601 IRAASRDELAAVDGVGGIVADAVLSWFEIGWHCEIVENWARDGVQFAIPGHPGPGRADTG 660 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 +G TVV TGSL +R+ A+ +V G K A SVSKKTD V AG AGSKLAKA+E Sbjct: 661 GGVLSGLTVVATGSLEGYTREAAQEAIVAAGGKAASSVSKKTDFVAAGPGAGSKLAKAEE 720 Query: 655 LGIEVIDEAEMLRLL 669 LG+ V+D A+ L+ Sbjct: 721 LGVRVLDAAQFTILV 735 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 242/668 (36%), Positives = 375/668 (56%), Gaps = 17/668 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M ++ ++ +L +++++Y Y+V+ P I D EYD L + L++LE HP+LI DSPTQ Sbjct: 1 MMDVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F ++ H PMLSL+N F + F + + N K + E K+DG++ Sbjct: 61 RVGGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNIN--FQTNSKNEFVVEPKIDGVS 118 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y+NGVLV A TRGDG+ GED+ +NV+TI++IPL + +E+RGE+F+ + Sbjct: 119 ISLTYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIP---FTKTIEIRGEIFVDKKT 175 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F IN K FAN RN AAG++R L+ ITA+R L Y + E T Sbjct: 176 FLAINNQL----EKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPN-GLEESITTQT 230 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q K+W PVSD + + ++ +++ + ++ R L F++DG+VIK+NSL +QL Sbjct: 231 MVLEQLKQWKFPVSDTIRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQL 290 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +++PRWA+AFKF + T + V +GRTG + A+LE V++ G V+ ATLHN Sbjct: 291 GATSKSPRWAIAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHN 350 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ +RI D VVI +AG++IP+V+ V L +R DT + +CP C S + ++ Sbjct: 351 FDYIKTKDIRINDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIVD 410 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E CT C + + + +FVS+ AMD++G+ I +L E V + DL+ L Sbjct: 411 EVDQYCTN-ETCKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDK 469 Query: 481 K---LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K L ++G K +V+ +E +K+ AR L LGI+ VG A LA +F ++A Sbjct: 470 KNQVLKLDLKIGDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKA 529 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L+ AS+E L + DVGI VA ++N+F + ++ +I +L V + E +S Sbjct: 530 LQHASLENLISLNDVGITVAESLYNWFHDPNHLQLIEQLELRQVKTDQLPLKINFETNSI 589 Query: 598 FAGKTVVLTGSLSQMSRDDAKARL-VELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQEL 655 + K ++TGS +SRD K L + + A V D VIAG K+ A+EL Sbjct: 590 YFQKRFLITGSF-NISRDQIKDLLSAKFDCQFASEVKPTVDFVIAGNKPTLRKINHAKEL 648 Query: 656 GIEVIDEA 663 I +I+EA Sbjct: 649 NIPIINEA 656 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 294/574 (51%), Positives = 388/574 (67%), Gaps = 8/574 (1%) Query: 103 KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 + ++V + E KLDGLA S+ Y GVLV AATRGDG GED+T++ RTI+ +PL+L G Sbjct: 180 EQPQRVEYVAEPKLDGLAFSLTYAEGVLVRAATRGDGQEGEDVTAHARTIQDVPLRLQGA 239 Query: 163 NIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTF 222 PA LEVRGEV++P A FEK+N +AR G K FANPRNAAAGSLRQLDP+ITA R L Sbjct: 240 GYPALLEVRGEVYMPLATFEKLNAEARERGEKTFANPRNAAAGSLRQLDPKITASRGLRM 299 Query: 223 FCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 FCYG G +EGG L D + L K WGL VS E A+ LA+ ++ E R TL + Sbjct: 300 FCYGTGYVEGGTLADRYAEILAALKGWGLRVSPEAERVEGAQGCLAYTERLGEKRETLPY 359 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 +IDG V+KV+S +E+LGFVARAPRWA+AFKFPA E+ T V+ ++ QVGRTG ITPVAR Sbjct: 360 EIDGAVLKVDSQRLRERLGFVARAPRWAMAFKFPATEESTTVQAIDLQVGRTGVITPVAR 419 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 LEPV V GV V+NATLHN E+ R +R+GD+V++RRAGDVIP+VV V+ E Sbjct: 420 LEPVAVGGVTVTNATLHNFLELARKDVRVGDRVIVRRAGDVIPEVVRVIPRESHGALAVY 479 Query: 403 VFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQL 462 P CPVCG+ ER GE RC+GGL C AQ KE +KHF SR+AM+++G+GDK++ L Sbjct: 480 KEPVACPVCGAPTEREGGETALRCSGGLTCRAQVKEGVKHFASRKAMNIEGLGDKLVALL 539 Query: 463 VEKEYVHTPADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 ++ V +DL++L + L GLER+G KS N++ A+E++K + ARFL+ LGIR+V Sbjct: 540 MQAGLVERISDLYRLHEQRQVLVGLERLGGKSVANLLEAIEQSKAQSAARFLFGLGIRDV 599 Query: 521 GEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 G A LAA+F +L+AL AA++E+L + DVG VVA V +FFA+ + ++ L A G Sbjct: 600 GVTLAGSLAAHFTSLDALMAATVEDLVGIEDVGEVVARRVVHFFAQAHHGAELAALRALG 659 Query: 581 VHWP------APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 V P + P +G +VVLTG+L+ ++R+ A RL LGAKV SVS Sbjct: 660 VAAAGEPWRVEPDGHGVAAAEQPLSGLSVVLTGTLAGLTREAAAVRLEGLGAKVVASVSG 719 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 KT ++ GE+AGSKLAKAQ+ G+ V+DEA + L Sbjct: 720 KTGCLVCGESAGSKLAKAQKAGVPVLDEAALEGL 753 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 64/103 (62%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 + ELR L H+ + YH +D + DAEYDRL REL+ LE P LI+ DSPT RVG A Sbjct: 5 RAAELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAI 64 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT 109 L F ++RH V MLSLDN F + + F++RVQ+ L + V Sbjct: 65 LEGFEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGLAESVVVE 107 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 246/711 (34%), Positives = 397/711 (55%), Gaps = 48/711 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT---PDS 57 +E ++L+ L + +H+ Y+ P I D+EYD L R + P+L P+ Sbjct: 14 IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELK 115 P ++G + ++ H +P LSL+ +++ E F R+ K++ + + E K Sbjct: 74 PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DG ++I YE G V AA RGDG +GED+++ +R I IP L NIP +EVRGEV+ Sbjct: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLS-LNIPEIIEVRGEVY 192 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +N++ G K +ANPRNAA+G LR+L+P R L FF +G+G Sbjct: 193 ISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPT-DITRYLNFFVHGLGKTSEI-F 250 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 L + + G PV++ V + ++++Y++++ R TL +DIDG+V KV+ + Sbjct: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q+QLG AR+PRW ++ KF ++ T + D++ Q+GRTG +TPVARLEPV++ G L++N Sbjct: 311 LQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITN 370 Query: 356 ATLHNADEIERL-----------GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF 404 ATLHN D I+ L +R+GD+V+++RAG+VIP+VV+++++ER D + F Sbjct: 371 ATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFSF 430 Query: 405 PTHCPVCGSDVERVEG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458 P+ CP+C S V R A RCTGGL C AQ+ E LKHFVSR A +++G+G + Sbjct: 431 PSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQQ 490 Query: 459 IDQLVEKE----YVHTPADLFKL------TAGKLTGLERMGPKSAQNVVNALEKAKETTF 508 +D + E + PAD+F L + K+ + G S N+ +++ K + + Sbjct: 491 LDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNISL 550 Query: 509 ARFLYALGIREVGEATAAGLAAYFGTLEALEAA----------SIEELQKVPDVGIVVAS 558 RF+++LGIR VG A LA Y+ + + L +VP VG ++A Sbjct: 551 ERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQ 610 Query: 559 HVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAK 618 + F+ N + LL E I + + + S K +V TG+L ++ R A+ Sbjct: 611 AIVEFYQNPRNICAVEALLKE---VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQ 667 Query: 619 ARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + +LGA V+ +S+KTD++I G+ GSKL KAQ+LG+++++E + L LL Sbjct: 668 EYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 255/686 (37%), Positives = 391/686 (56%), Gaps = 29/686 (4%) Query: 1 MESIEQQLTELR--TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M + ++ L+ + H Y+ + P + D E+D L +++ +LE K+ L + SP Sbjct: 1 MNDKDLEIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKL 116 T+ +G P F +I+H+VPMLSL N F+EE F K++ + L K+ + + E K+ Sbjct: 61 TKSIGFKPSKNFQKIKHKVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKI 120 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DG++ S++Y +G L +RGDG GEDIT N++TI+ IPL++ N P +++RGEVF+ Sbjct: 121 DGISASLIYIDGKLTKGLSRGDGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFI 180 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 F+KI FANPRNAA+GSLRQ + ITAK PL F Y G + + Sbjct: 181 ENNDFKKI--------KDKFANPRNAASGSLRQKNSLITAKIPLKFIAYTYGYEKKMNIK 232 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 + L K WG + + ++ + ++EE R L FDIDG+V KVN Sbjct: 233 N-QTSFLENLKLWGFKTNPFNKKIIGVKNLMLNHKELEEKRKELAFDIDGIVYKVNDFDL 291 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q++LGF A APRWA+A KF A ++ + ++E Q+GRTGA+TPVA+++PV++ GV+VSNA Sbjct: 292 QKRLGFAANAPRWAIAHKFSANSSISEIMNIEIQIGRTGALTPVAKIKPVNIGGVIVSNA 351 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN DEI R +R+GD V + RAGDVIP VV+V L +R +++++ +FP CP CGS Sbjct: 352 TLHNEDEIVRKDIRVGDTVTVERAGDVIPHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTI 411 Query: 417 RVEGE------AVARC-TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 + E AV RC + G C E +KHFVS+ A ++DG G KI++ + V Sbjct: 412 KDYNETTKRQDAVRRCASEGFECEKIAIERIKHFVSKDAFNIDGFGKKIVENFWNLKLVR 471 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 P D+FKL K+ LE G S N+ ++E+ K + RF+Y+LGIR +G+ A +A Sbjct: 472 LPQDIFKLNYNKIEELEGWGKLSVANLRFSIEEKKNISLERFIYSLGIRHIGQENAKLIA 531 Query: 530 AYFGTLEALEAAS----IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA 585 + T S IE L + +GI + FF ++N V+SEL + Sbjct: 532 RHLKTASNFFRLSGEKNIESLSNIDGIGITQIQSIKKFFLNKTNLKVLSELEKNLLIKDV 591 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 ++ N + KT +LTG L+ +SR +AK+ + + K+ +V+KK D +IAG+ Sbjct: 592 ILINN----NGLLKNKTFMLTGKLNGISRAEAKSLIEQNSGKIISNVNKKLDYLIAGDKP 647 Query: 646 G-SKLAKAQELGIEVIDEAEMLRLLG 670 K+ A+E I++I++ E L++L Sbjct: 648 TLKKINTAKEWNIKIINQTEWLKMLN 673 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 216/662 (32%), Positives = 368/662 (55%), Gaps = 14/662 (2%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 +LR L + Y Y+ D +I D +D+ + EL LE K+PE P SPT ++GA Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYPEFYDPTSPTIKIGAEIHEP 86 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 + H+ M SL + ++ + + K++ + ++ CELK DG++++++Y+NG Sbjct: 87 STVFYHKYKMYSLQKTYSKKELIIWKKKISKSI---HTFSFVCELKYDGVSINLIYKNGF 143 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 L +A TRG+G GED+T N++TI+ +PLKL G N PA LE+RGEVFL F +IN+ Sbjct: 144 LTNAGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRI 203 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 ++G +ANPRN A+G+L+ D + +R L + V DT L K W Sbjct: 204 KSGKTPYANPRNTASGTLKIQDRKKVRQRNLFCIAFHVVGKNLP--FDTQYESLKHIKNW 261 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G + + C++ EEV F + L + IDG+VIKVN +Q LGF + PRW Sbjct: 262 GFQIPETARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIKVNEYQKQSLLGFTNKYPRW 321 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+KF + T + + FQVGRTG +TPVA + P+ ++G ++ L+N I+++G+ Sbjct: 322 AIAYKFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMGI 381 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 GD +++ + G++IP+V + + +R V F CP C S + + + CT Sbjct: 382 YHGDTLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKKCPSCNSVLTK--NNELFYCTNQ 439 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 C +QR E ++HFVS +AM++ +G+++I +L +K ++++ +L++L +L ++ + Sbjct: 440 -NCFSQRIEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGVK 498 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 K A +++N ++K+KE F+R LYALGIR VGE + L F + +L A+ + L + Sbjct: 499 EKLADSIINNIKKSKENPFSRVLYALGIRHVGEDISKKLTKQFLDINSLMHANYDHLISI 558 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 +G + + +F+ NR+ + L+ G+H+ + S GK+ V TG L Sbjct: 559 SGIGKKITESIITYFSIYENRHAVQMLIKYGLHFSK-----CSKKLSSLEGKSFVFTGKL 613 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVIDEAEMLRL 668 S M+R A+ + LG KV +V+ + + ++ G+ GSK K+ + ++++ E L + Sbjct: 614 SCMTRHKAQNMVENLGGKVYNTVNNQINFIVIGKNFGSKFKKSMKKNHVQILTENLFLDM 673 Query: 669 LG 670 L Sbjct: 674 LK 675 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 247/670 (36%), Positives = 364/670 (54%), Gaps = 12/670 (1%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +L ELR + H+ LY+ APEI DA+YD L REL LE +P+L +G Sbjct: 54 RLVELRAEIARHDDLYYRKAAPEISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDR 113 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 + RH PMLSL+ + EE+ L+F RV +L E++ E K+DG+A+S+LYE Sbjct: 114 SGVRGEFRHFAPMLSLEKAYTEEALLSFYDRVLSQL-TFEELDCLVEPKVDGMAISVLYE 172 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G V A +RG+G GED++ NV I +P +L E+ P R+E+RGEV++ GF ++NE Sbjct: 173 RGEFVRAVSRGNGRVGEDVSENVLRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNE 232 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GELPDTHLGRLLQ 245 G + FA+PR+ AAGSL+ DP + ++R L+ +G G E E P+T G Sbjct: 233 ARVAAGEEPFAHPRSLAAGSLKLDDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGL 292 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 + WG+PV + + E +LA ++EE R F +DG V+K++ Q +LG Sbjct: 293 AQSWGIPVLEELRKTRGTEALLAAVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTS 352 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KF + T + + QVGRTG +TPVA LE + + G + A+LHN IE Sbjct: 353 APRWAMAYKFAEKRVETRLLGIRIQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIE 412 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R+ LRIGD V + RAG+VIP VV V L++R + + VFP CP CG E EG Sbjct: 413 RMDLRIGDVVYLERAGEVIPNVVGVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERY 472 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C AQ + ++HF S RA+ ++G+G I L++ V T ADL+ L L Sbjct: 473 CRSS-TCPAQAQRKIEHFASSRAVGIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQA 531 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 A+ +V+ + ++ + R L+ LGI EVG + + LAA +G L A AS + Sbjct: 532 GVGSEAVARKLVSEISGSRAASLWRVLFGLGIPEVGVSRSKKLAAAYGDLAAFARASALD 591 Query: 546 LQKVP-----DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 G V V + + + NR +I L+ G+ + ++ E+ AG Sbjct: 592 FSPGGRAAEVGFGPVAREAVLAYLSLDENRELIGRLVELGLGARSEVMDTRSEV----AG 647 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 V TG+L +SR +A A + GA+ +VS D ++ G+ G+KL KA+ELG+EVI Sbjct: 648 TIFVFTGALEGLSRKEAMALVEAAGAETRSAVSSACDFLVVGKEPGAKLQKARELGVEVI 707 Query: 661 DEAEMLRLLG 670 + RLLG Sbjct: 708 GLEKFRRLLG 717 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 236/672 (35%), Positives = 374/672 (55%), Gaps = 23/672 (3%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +L ++ + +Y Y+ +D P + D EYD+L +L +L+ K+ + +SPT RVG Sbjct: 5 DELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQ-KNLAYVPENSPTNRVGGQ 63 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--------VTWCCELKLD 117 L F + H +LS D + + +R + + E + + E K D Sbjct: 64 ILDKFEKHYHLTRLLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLEFVMEYKFD 123 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL +++ YE+G+L +AATRG+G GE + + TIR+IP + +++ LE++GE +P Sbjct: 124 GLTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEKSL---LEIQGEALMP 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + ++ N++ N RNAAAG++R LD + TAKR LT + Y V Sbjct: 181 LSELDRYNKE----NETQLKNARNAAAGAIRNLDTKETAKRHLTAYFYAV--PTNSINFK 234 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L K+ L V S +E++ +++E+R TL DGVVIK+N Q Sbjct: 235 NEEEMLSFLKEMKLNVHPYHKKVTSLDEIINELERIKEERKTLDVLTDGVVIKINDKKTQ 294 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG + PRW++AFKF +E T + DV + VGRTG +TP A LEPV +GV VS AT Sbjct: 295 EVLGVTEKFPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRAT 354 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N D+IER ++IG V IRR+ DVIP+++ VV +P T ++ PTHCP C S++ + Sbjct: 355 LNNYDDIERKKVKIGSDVFIRRSNDVIPEILGVVDENQPG-TIKIEKPTHCPYCHSELIQ 413 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C + C Q ++H+ SR AMD++G+ +K I QL+E+ + D++ L Sbjct: 414 E--KVHIVCPNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIYDIYDL 471 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T +L LER G K A+N++ +++ +K F+YA+GI VGE TA LA F + + Sbjct: 472 TYDELIKLERFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKFKSFDK 531 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L A+++EL ++ D+G + ++ FF +++ I LL++G++ P ++ Sbjct: 532 LRNATVDELIEIDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNPRENTSD--SKK 589 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 G V+TG++ +RDD K L + GA V GSVSK TD+V+AGE AGSK KA EL + Sbjct: 590 LDGINFVITGTIDGYNRDDIKKMLEDNGANVRGSVSKNTDIVLAGEKAGSKKDKAIELNV 649 Query: 658 EVIDEAEMLRLL 669 E+ ++ ++ L Sbjct: 650 EIYEDEKLYSFL 661 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 245/664 (36%), Positives = 357/664 (53%), Gaps = 7/664 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR-VGA 64 ++L LR + H+ LY PEI DA+YD L +ELRELE++ + D R +G Sbjct: 45 RRLELLRVEIARHDDLYFRKAQPEISDADYDALKQELRELESRFGRRVPRDPAALRDMGD 104 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 ++ F + RH + MLSL+ E AF++ ++ +K ++ + E K DGLA+S Sbjct: 105 DRVSGFPKARHRMRMLSLEKTTTESGVRAFDQALRRLVKPPAEIAYVVEPKFDGLAISAT 164 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G LV TRG+G G+D+T+ IR +P +L G P +EVRGEVFL A FE+I Sbjct: 165 YEEGRLVRLVTRGNGEEGDDVTAAAGRIRTLPPRLAGAAWPRVVEVRGEVFLTFAEFERI 224 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N R G F++PRN A G+L+ L+P R L +G+G ++G P + L Sbjct: 225 NRGRRENGRPTFSSPRNLAVGTLKSLEPEDREVRQLDVVFFGLGAIDGHAAPASQTQLLE 284 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +WGLP + +S ++ ++ R L F IDG VIK++ Q G Sbjct: 285 WIAQWGLPSVEDARRVDSIDDAWRAVQELGGRRSHLAFPIDGAVIKLDDAVGQTAAGVSE 344 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 APRWA+AFK+ T VR V QVGRTG ITPVA LEPV +AG ++ ATLHNA E+ Sbjct: 345 VAPRWAIAFKYAPARVGTRVRGVALQVGRTGVITPVAELEPVALAGARITRATLHNASEM 404 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ER LR+GD V I R G++IP VV V ++R + VFP CP CG+ + R +A Sbjct: 405 ERSDLRVGDFVWIERMGEIIPAVVAVDTAQRGTVSAPFVFPRDCPGCGALLVRALDDANW 464 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RCT C A++ ++H+VS + + G+G ++ LV + V DL+ LTA ++T Sbjct: 465 RCTND-DCPARQVRKVEHYVSDEGVGIRGLGAASVEALVRSQRVREIPDLYTLTAAEVTA 523 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 R+ A VV+A++++++ R + LG+ +G A A L A F L AA Sbjct: 524 HTRLSAAQAARVVDAIQRSRKAPLRRVIAGLGLPGIGPAGANALGARFADLPQFAAARES 583 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +LQ+V + + + E + +++ L A GV +A AGK VV Sbjct: 584 DLQQVEGLRPESVRALATALSAERTQQLLARLAAAGV-----GAQSATADAGTLAGKEVV 638 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 TG+L +SR A + E G +VA V+ T ++AG SKL +A LG+ VI+EAE Sbjct: 639 FTGTLPTLSRRRATELVEEAGGRVADRVTAATWRLVAGRNPASKLHQATALGVPVIEEAE 698 Query: 665 MLRL 668 +LRL Sbjct: 699 LLRL 702 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 286/654 (43%), Positives = 386/654 (59%), Gaps = 75/654 (11%) Query: 1 MES-IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPT 59 ME + ++ ELR + + ++ Y+ + PEI DA+YD+L REL+ELE K+PEL+T DSP+ Sbjct: 1 MEQGVIERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPS 60 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 RVG A +F ++RH +PMLSL N FDE F R+ R+ ++ + + E K DGL Sbjct: 61 MRVGGAVRKSFVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGL 120 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+S+ YE G V TRGDG GED++ N+RTIR++PLKL G N+PA LEVRGEV++P+ Sbjct: 121 AISLRYELGKFVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRD 180 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-------- 231 GF + N+ A G K+ ANPRN AAGSLRQLD RI+A+RPL+FF YGVG+++ Sbjct: 181 GFSEFNKRAMARGEKLLANPRNGAAGSLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEE 240 Query: 232 -GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 + TH L Q + WG PVS V + + ++ +LA+Y ++ E R L FDIDGVV K Sbjct: 241 IPQSIASTHSAMLAQLRAWGFPVSSLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYK 300 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 ++ LA Q ++GFV+RAPRWA+A KFPAQEQ T V +E Q+GRTGA TPVARL+PVHVAG Sbjct: 301 LDDLAGQREMGFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAG 360 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPV 410 V+V+NATLHNAD+I RL +R+GD V++RRAGDVIP+V VV +RP T+ PT CPV Sbjct: 361 VIVTNATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPATQSWQMPTQCPV 420 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 CGS++ R EG+AV RC+G L C AQRKE+ +HFVSRRAMDVDG+G+K I+ LV+ V Sbjct: 421 CGSEIVREEGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQG 480 Query: 471 PADLFKLTAGKLTGLERMG-------------PKSAQNVVNALEKA-----------KET 506 ADL+ LT +L L + A LE +E Sbjct: 481 VADLYLLTVDQLLQLRMISTAESPHAFLREAREHLASGAYAQLEATLVGIGVDLAGEREV 540 Query: 507 T-------FARFLYAL--GIREVGEATAAGLAAY-------------------------- 531 L +++ A L Sbjct: 541 PQTWQADLLRAGLPTFDWNRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTA 600 Query: 532 ------FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 FG L+ + ++VPD+G VA + +FF + N+ I LLA Sbjct: 601 KALSAWFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLAR 654 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 78/250 (31%), Positives = 113/250 (45%), Gaps = 30/250 (12%) Query: 448 AMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSA------------QN 495 A+ ++ +G+ L + + L + +G + A Q Sbjct: 589 ALGIEHVGESTAKALSA--WFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQK 646 Query: 496 VVNALEKAK---------------ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 ++ L K E A L L I +V AA +A FG+++AL Sbjct: 647 AIDHLLARKVRIGDTHPPSPKLRGELRLANLLEDLEIPKVTPIRAAQIATAFGSIDALRN 706 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 E L + V VA + + +N + + A + EE P G Sbjct: 707 GGPEPLVEA-GVPQSVAESLATWLLVPANDTLAVNAQKKLSALLAMMPEAGEEKTGPLDG 765 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 +TVV+TG+L+ ++RD AK RL LGAKVAGSVSKKT ++AGE AGSKL KAQ LG+E+ Sbjct: 766 QTVVITGTLAALTRDAAKQRLEALGAKVAGSVSKKTAFLVAGEEAGSKLDKAQSLGVEIW 825 Query: 661 DEAEMLRLLG 670 DEA +L LG Sbjct: 826 DEARLLAFLG 835 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 226/676 (33%), Positives = 362/676 (53%), Gaps = 21/676 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PDS 57 E I ++ EL+ + + Y+ +DAP + DA YDR + +L++LE ++ + +S Sbjct: 5 EKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANS 64 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PTQ++ A F ++ H+ PMLSL+ + EE F ++ ++ E K+D Sbjct: 65 PTQKINAKSSDLFKKVTHDSPMLSLNKAYTEEEIQKFIDNIKKV---TPTFSFFLEPKID 121 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL++SI Y NG L A TRGDG GED+T N++ I+ IP ++ + LEVRGEV+L Sbjct: 122 GLSISIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAYQKP---LEVRGEVYLA 178 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FEKIN + ++ + ANPRNAAAG+LRQLD I A R L+ F Y + E + Sbjct: 179 LSEFEKINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPEDHNIF- 237 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T L K G V+ T + E+ ++ + + TL ++ DGVVIK+N L Sbjct: 238 TILEARDFLKNLGFSVTKEATYAKDLSEINSYIENFKHLKKTLDYETDGVVIKLNELQHY 297 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG + P A+AFK+ T ++++ VGRTG +T A LEPV ++G ++ AT Sbjct: 298 DALGATNKFPHSAIAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILSGSCITFAT 357 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N I+ L L GD V I++AG++IP V+ +V + E CP C SD+ Sbjct: 358 LNNYQYIKDLKLNKGDLVYIKKAGEIIPCVIGLVNKKHEETEFNKFL--KCPYCNSDLIE 415 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C+ C R++ + HF S++AM+++ +G+K ID + + + D +KL Sbjct: 416 TDTLLEQYCSN-ENCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLENVIDFYKL 474 Query: 478 --TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 K+ LER G KS N++ ++E++K+ + R ++ L I+ +G A LA+ L Sbjct: 475 KEKKDKIMSLERFGTKSVMNILKSIEESKKNSLDRVIFGLSIKHIGSKVAYFLASKILKL 534 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 + L ++G + S + N+ A+E N+N++ +LL V E Sbjct: 535 SNFLDFDFDSLISYNEIGEKIISSLKNWVAKEENKNLVKDLLDNDVDLEFIATKKTER-- 592 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 FA + V+TG+LSQ R + + E G ++ +VS KT ++ GE AGSKLAKA+ L Sbjct: 593 --FAQLSFVITGTLSQ-PRSHFEKLIKENGGSISSAVSAKTSYLLVGEDAGSKLAKARAL 649 Query: 656 GIEVIDEAEMLRLLGS 671 ++++DE LL S Sbjct: 650 NVKILDEEAFNELLVS 665 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 248/699 (35%), Positives = 388/699 (55%), Gaps = 45/699 (6%) Query: 1 MESIE--QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M+ I+ ++ E TL + Y+ +D P D EYD L + ++ E + + I DSP Sbjct: 1 MQEIKSHEEYLESIKTLNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAF-------NKRVQD----------- 100 TQR+G L FS+ +H+ M SL+++F+ + RVQ Sbjct: 61 TQRIGDKILKDFSKNKHKKRMWSLEDIFNPSDLDEWLTKLSNAIARVQKTTLSPTLFDTE 120 Query: 101 -RLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL 159 ++ + + +C K DG+++++LYENG+L SA TRGDG GE +T N +T+ ++P + Sbjct: 121 TQIDSINNLAFCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLPHTI 180 Query: 160 HGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRP 219 +E+RGEV L + F ++N++ R +FANPRNAAAGS+RQLD +T +R Sbjct: 181 P---FKGSIEIRGEVVLSKENFARLNKEQERNNKALFANPRNAAAGSMRQLDSNLTRERN 237 Query: 220 LTFFCYGVGVLEGGELPDTH-------LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHK 272 L+F +G+G ++ EL L+ ++G + +AE + Y K Sbjct: 238 LSFVAWGIGSVDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV-NAESIEREYQK 296 Query: 273 VEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVG 332 + DR F +DG VI ++ LA Q++LGF +APR+A A+KFPA E + + + QVG Sbjct: 297 ILNDRDNYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQVG 356 Query: 333 RTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL 392 RTG ITPVA +P + G +S ATLHN EI++ +RI D ++ R+GDVIP++ V+ Sbjct: 357 RTGIITPVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVLH 416 Query: 393 SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVD 452 R D ++ PTHCP+C ++ + CT C A K L HF S++ MD+D Sbjct: 417 ERRKGDEIKIAKPTHCPICSHELSYE--DIYIYCTNP-NCDAIIKAKLIHFASKKCMDID 473 Query: 453 GMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKA-KETTFARF 511 G+G II+ LV+ + D++ L E K AQN++NA++ + + F RF Sbjct: 474 GLGSSIIELLVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWRF 533 Query: 512 LYALGIREVGEATAAGLAAY-FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 ++ALGI +GE + LA+Y + + IE+LQ++ G +A ++F N+ Sbjct: 534 IHALGILHIGEVASKKLASYGY----EIFDYDIEKLQEIEGFGKDMAQSFYDFCI--HNK 587 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 + I+E+ + + DS F KT V+TG+ + +SRD KA+L LGAKV+ Sbjct: 588 DFINEMQEI-LKPQLQVKTTQINTDSIFYQKTCVITGTFA-LSRDSIKAKLESLGAKVSS 645 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 S+S KTD +IAGE AGSKL KAQELGI++I+ +E++++L Sbjct: 646 SISTKTDFLIAGEKAGSKLTKAQELGIKIIESSELMQIL 684 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 275/763 (36%), Positives = 390/763 (51%), Gaps = 104/763 (13%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +++ LR+ LR H LY+ PEI DAEYD L EL +LE HPEL PDSPT+R Sbjct: 43 DPAHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHPELSDPDSPTRR 102 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFD-------EESFLAFNKRVQDRLKNNEKVTWCCEL 114 VG APL F+QIRH VPMLS+D++F+ +E F ++ L+ E V E Sbjct: 103 VGGAPLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQT-ENVPVSVEP 161 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG+A+SI+Y NG L AATRGDG G+D+T+NVRTIR++PL L P LEVRGEV Sbjct: 162 KIDGVALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLP-PGAPPVLEVRGEV 220 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 F+P F K+NE+ G FANPRNA AG+L+QLDPR A RPL F +G+G EG E Sbjct: 221 FMPNEAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAHGLGAYEGPE 280 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L D + G+P ++ V +S E ++ R TL + DG VIK++S Sbjct: 281 LRDA-KDFWNMLRHCGIPCNEPVYYTDSLESTRQAVRDIDRLRHTLPYGTDGAVIKISST 339 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A +E LG ARAPRWA A+KFP +++ T + ++ QVGRTG +TPVA L+PV ++G V+ Sbjct: 340 ATREALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQPVLLSGSTVA 399 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH----CPV 410 ATLHN DEI+R +RIGD V++ +AG++IP V+ V LS+RP+D R CP Sbjct: 400 RATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSILEATKGLCPA 459 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 CG+ + + EG+ RCT C AQ + HF SR A+DV+ +G + + L + Sbjct: 460 CGNPIMKEEGKVAWRCTN-FTCPAQAVTGITHFCSRSALDVESIGSSVAEALRSSGLASS 518 Query: 471 PADLFKLTAGKLTGLE--------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 DLF L +L L R G K+A+ ++AL+ A+ R+L A GI VGE Sbjct: 519 ALDLFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIAFGIPLVGE 578 Query: 523 ATAAGLAAYFGTLEALEAAS-IEELQKVPDV--------------------GIVVASHVH 561 A LA L+ + + + ++ ++ ++ G + A V Sbjct: 579 VVAKALADTHPDLKHVADSPYLRDIVRLDELVEQAAKTNPNTRENKKAVKEGALSAEAVQ 638 Query: 562 NFFAEESNRNVISELLA------------EGVHWPAPIVINAEEIDSPF----AGKTVVL 605 + I L A + + I + A + F AG Sbjct: 639 E--RHQELMEEIDRLTAPYLATGYLRKNTAKFSYGSEIGVAAAKSLRSFFASAAGNH--- 693 Query: 606 TGSLSQMSRDDAKARLVELGAKV----AGSVSKKT-----------DL---VIA------ 641 ++ + R + A + AGS+S KT D +IA Sbjct: 694 --TMDVLHRLGINPQSQSYRASLLEIPAGSLSGKTFVITGTLSHPRDYFEQLIASHGGKA 751 Query: 642 -------------GEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 G GSK KA +LG+ VI E + +++G+ Sbjct: 752 TGAISKSTSCLLAGNGGGSKRDKALKLGVPVISEEDFYKMIGN 794 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 263/786 (33%), Positives = 370/786 (47%), Gaps = 121/786 (15%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVM----DAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ES Q +L + Y+ + DAEYD L +L+ LE +P+L+TPDS Sbjct: 10 ESALAQHADLVDQIEAARTDYYDQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTPDS 69 Query: 58 PTQRVGA----APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCE 113 PTQ VG A F H M S+D+VF A+ RV+ L+ + + E Sbjct: 70 PTQTVGGSGETANTEGFPPHHHLCQMGSIDDVFSYAEVDAWWARVEKSLEGQD-FSVSAE 128 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGE 173 +K+DGLA+S+ Y +G L ATRGDG TGED+T NV+TI +P++L GEN+P +E+RGE Sbjct: 129 VKVDGLAMSLTYLHGTLAVGATRGDGFTGEDVTENVKTIATVPVRLSGENVPELVEIRGE 188 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG 233 V+LP A F +N R G K+FANPRNAA GSL+Q DP AKRPL F +GVG + Sbjct: 189 VYLPLADFAAMNAARERDGEKLFANPRNAATGSLKQKDPVQAAKRPLAFLAHGVGKVRWA 248 Query: 234 E-----LPDTHLGRLLQFKKWGLPVSDRVTL--------CESAEEVLAFYHKVEEDRPTL 280 + +T + WGL S E+ ++ R Sbjct: 249 DPGAAAHLETQEDFYELLESWGLHSVRETPASLGLSLAGIHSLAEIHTVLDQMTAHRHDF 308 Query: 281 GFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPV 340 IDGVV+KV+S AQ++ LG ARAPRWA A+KFP +E T + +E QVGRTG +TP Sbjct: 309 AHQIDGVVLKVDSFAQRDALGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPF 368 Query: 341 ARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR 400 +E V V G VS ATLHNA E+ R +R GD VV+R+AGD+IP+++ V+S R Sbjct: 369 GVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEILGPVMSLRTAGLP 428 Query: 401 EVVFPTHCPVCGSDV-ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII 459 E V P CP CG+++ + EG+ RC C AQ E L H SR A+D++G+G++ Sbjct: 429 EWVMPDTCPSCGTELGAQKEGDIDLRCPNQSGCPAQITERLIHVGSRNALDIEGLGEEGA 488 Query: 460 DQLVEKEY-----------------------------------------------VHTPA 472 L + E+ + + A Sbjct: 489 LALTQPEFGRGDVAAALAAGGHCELEDGTIVAVPSGEPRSLEAIEDLLPPPQSPVLTSEA 548 Query: 473 DLFKLTAGKLTG--LERMGPKSAQNVVNALEK--AKETTFARFLYALGIREVGEATAAGL 528 LF L L + R P + + AK + + G A + Sbjct: 549 GLFALQPEDLRDVMVWREIPGTGGRDWQQVRFFWAKPRPLPKAAQEATGQRFGPPVAGKV 608 Query: 529 AAYFGTLEALEA--------------------------------------ASIEELQKVP 550 F E L+A AS E+L + Sbjct: 609 VQTF--FEQLQAAKSKELWRVLVALSIRHLGPVAARTIARQFVTMSALRVASAEQLGEAE 666 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE-------EIDSPFAGKTV 603 +G V+A+ + ++F ++ ++ A GV + +E + G TV Sbjct: 667 GIGEVIAASIRDWFTVPWHQEIVDAWEAAGVGAVSKAEGASEASLAGDTNLAPTLEGLTV 726 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TG++ +R+ A+ + G K GSVSKKTDLV+AG AGSKL+KAQ LGI VI+ A Sbjct: 727 VITGNIPGYTRESAQLAVEARGGKATGSVSKKTDLVVAGAGAGSKLSKAQALGIPVIESA 786 Query: 664 EMLRLL 669 LL Sbjct: 787 GFEALL 792 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 221/679 (32%), Positives = 360/679 (53%), Gaps = 30/679 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ + +L +RHH+YLY+V + PEI D ++D+L + LR+LE + P+ +SPT Sbjct: 15 KEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEFPQFKDLNSPTLV 74 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG+ F + +H++P+LSL N ++++ L + + + + E K+DG ++ Sbjct: 75 VGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNK------TDPDGLYSVEWKIDGASI 128 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + YENG+L + TRG G G+D+T N+RT+R IPL+L P + +RGEVF+ F Sbjct: 129 VLYYENGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPE---PITVYLRGEVFMTFKDF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E+ NE +ANPRN +AGS++Q + TAKRPL F Y + TH Sbjct: 186 EEFNE----LSSGKYANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQ 241 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + +K PV ++ + ++ + TLGF DG+VIK+N +++++ G Sbjct: 242 ILSKLEKLTFPVPPDTVFVNGSK-IAETIKDFKKKKDTLGFPTDGLVIKLNDISKRDAQG 300 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + + +PRWA A+KF A + + + D+ + VGRTG ITP +EPV++AG V+ ATLHN Sbjct: 301 YTSHSPRWARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQ 360 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I+ LG+ IG V + + G++IP V V+ P +CP C + + E Sbjct: 361 DYIDELGVGIGAIVRVAKRGEIIPAVEEVI----TPGKDVFKIPDYCPSCKTKTIKKENL 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--A 479 C C + K + + R+ MD++G+GDK I+ L + Y+ + ADL+ L Sbjct: 417 VDLFCPNP-DCPDRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQK 475 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEAL 538 KL E G KS + N +E +K+ F L ++G+ E+G L + +++ + Sbjct: 476 EKLIEEEGFGEKSLAIIFNGIEHSKQKDFRFLLPSIGLPELGHKVTELLIEHGIDSIDEI 535 Query: 539 -----EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 + I L ++P +G F+++ +I+ L G+ A + +++ Sbjct: 536 LSIAKDKKRISSLLEIPGIGPSTIKAFEENFSDKRILKLIARLKNAGLKLKADPIKVSDQ 595 Query: 594 IDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 PFAG++ +TGS RD A +V G + +VS KT ++AG AGSKL KA Sbjct: 596 --QPFAGQSWCVTGSFENFQPRDKAMDLVVYYGGRKVSAVSSKTTHLLAGPGAGSKLEKA 653 Query: 653 QELGIEVIDEAEMLRLLGS 671 ELGI V +E + L LL S Sbjct: 654 NELGIVVYNEKQFLDLLKS 672 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 206/676 (30%), Positives = 357/676 (52%), Gaps = 21/676 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PD 56 +E I +++ +L+ + + Y+ +D+PE+PD YD +L+ LE K+ + + Sbjct: 7 IEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELKN 66 Query: 57 SPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKL 116 SPT+++ A F +++H+ PMLSL+ + + F ++ ++ E K+ Sbjct: 67 SPTRKINALASDLFKKVKHKRPMLSLNKAYSLDEIQKFIDNIKKI---TSDFSFFIEPKI 123 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DGL++SI+YE+G LV A TRGDG TGED+T+NV + IP + LEVRGEV+L Sbjct: 124 DGLSISIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTIE---YKESLEVRGEVYL 180 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 + FEK+N + ANPRNAAAG+LRQL+ +I +R L+ F Y V + Sbjct: 181 AISDFEKLNLKLGQENKNKLANPRNAAAGTLRQLNSQIIKERNLSAFLYYVVDPLQHNI- 239 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 T K +G PV+ V + +++ + + + + ++ DGVVIK+N + Sbjct: 240 KTMQEEHEFLKTYGFPVTHEVQHANTLQDIEEYIRNFKNQKLLIDYETDGVVIKLNEVQY 299 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++LG A+ P +A+AFK+ + T ++ + VGRTG +T A LEPV ++G LVS A Sbjct: 300 FDKLGSTAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVEISGSLVSFA 359 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TL+N I+ L L D V I++AG++IP V+ ++ ++ D CP C + + Sbjct: 360 TLNNFQYIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDH--FQKVEFCPYCHNKLV 417 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 E C+ C ++ L HF S+ +D++ MG++ ID ++ + P D+F Sbjct: 418 DSETGLEQFCSNDQ-CPEIQRRKLIHFCSKDGLDINTMGERNIDLFLKNSLISNPIDIFN 476 Query: 477 L--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L L L RMG KS +N++ ++++ K + + AL I +G A +A+ + Sbjct: 477 LKNKKQDLLKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLAKFVASKIKS 536 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 L L +L ++G + + + ++ + + N+ ++ +++ G E I Sbjct: 537 LHNLLNYDFSQLIDYHEIGDKIINSIISWISNDFNKKLVEDIINLGYDLKD----ENESI 592 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 + K+ V+TG+L R + + + G + S+S KT+ ++AGE AGSKL KA + Sbjct: 593 TNLLENKSFVITGTLGH-PRSYFERLIEKNGGLIHSSISSKTNYLLAGENAGSKLQKANK 651 Query: 655 LGIEVIDEAEMLRLLG 670 L I +I E ++ +++G Sbjct: 652 LNITIITEEDLFKMIG 667 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 244/625 (39%), Positives = 327/625 (52%), Gaps = 55/625 (8%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + + EL T+ H++ Y+V DAP + DAEYD L+REL ++E HP+L TPDSPTQ Sbjct: 41 LSAARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQ 100 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG F+ + H MLSLDN F+ E A+ +RV + ++ V + CE+K+DGLA Sbjct: 101 RVGGTFSTDFAAVDHREQMLSLDNAFNAEDLDAWAERVHREIGTSQ-VHYLCEVKIDGLA 159 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQ 178 +++LYE G LV AATRGDG TGED+T NV TI IP L +P +E+RGEVF+ Sbjct: 160 IALLYEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRGEVFMLV 219 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F +NE G FANPRNAAAGSLRQ +P+ITA RPL + +GVG L + Sbjct: 220 DQFAALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHWEAGTPS 279 Query: 239 ----HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 F+ WG+PVSD + E V + R + ++DG+V+KV+ L Sbjct: 280 ELRRQSDAYDYFRAWGVPVSDHNRVVEGMPGVQEMIDYYGDHRHDIEHELDGIVVKVDEL 339 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q QLG +RAPRWA+A+K+P +E T + D+ VGRTG +TP +EPV VAG VS Sbjct: 340 ALQRQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVLVAGSTVS 399 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN E+ R G+ IGD VV+R+AGDVIP++V V+ R RE V PT CP CG+ Sbjct: 400 MATLHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTECPSCGTT 459 Query: 415 VER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY------ 467 + EG+ RC C +Q +E + H R A D++ MG + LV+ E+ Sbjct: 460 LAPAKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMGWEAAIALVDPEHNRPESA 519 Query: 468 -----------VHTPADLFKLTAGKLTGLERMGPKSAQ---------------------- 494 + T A F L + K Sbjct: 520 DAEGVPVQVPVLETEAGFFDFEVDALADVLVWREKKKAGVGTGVWEQVPFFWTKATAKTP 579 Query: 495 --------NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 EKAK R L AL IR VG A LA F ++EA+ AA+ EEL Sbjct: 580 SKPSATTVKFFEEREKAKARPLWRVLVALSIRHVGPTAARALATAFESVEAIMAATEEEL 639 Query: 547 QKVPDVGIVVASHVHNFFAEESNRN 571 VG +A V +F S+ Sbjct: 640 AATEGVGPTIARAVRIWFNGRSSVE 664 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 3/105 (2%) Query: 566 EESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELG 625 + +R +I A GV E I G TVV+TGSL +RD K ++ G Sbjct: 737 SDWHREIIDRWRAAGVRMRDE---RDESIVRTLEGFTVVVTGSLEGFNRDQVKEAIIVRG 793 Query: 626 AKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 K AGSVSKKTD V+ GE AGSK AKA+ELG+ ++DEA + LL Sbjct: 794 GKAAGSVSKKTDFVVVGENAGSKEAKARELGLTILDEAGFVTLLA 838 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 267/765 (34%), Positives = 368/765 (48%), Gaps = 101/765 (13%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 E+ + +L + Y+ D+P + DA+YDR+ RE+ E+E ++P+L DSPT Sbjct: 9 FETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADSPTM 68 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG + + FS++RH M+SLD+VF E + R+ + + E+K+DGL+ Sbjct: 69 SVGGSVDSGFSEVRHLAQMMSLDDVFSLEELAGWETRMAEA-TGISDLEMTTEVKVDGLS 127 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LYENG LV AATRGDG GED+T+N RTI +IP L G +P R+EVRGEV+ P A Sbjct: 128 INLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSG-TVPTRIEVRGEVYFPVAD 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE---LPD 237 F NE G K F N RNAAAGSLRQ DP TAKRPL +G+G +E GE P Sbjct: 187 FAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGFVEAGEDFTEPI 246 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T +G Q + WGLPVS + + + ++ E R L +IDGVV+K+N L Q Sbjct: 247 TQMGWYEQLRDWGLPVSPYTRVLTGRKAIEERIAELGEKRHDLEHEIDGVVVKINDLDLQ 306 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG +R PRWA A+KFP +E T + D+ QVGRTG +TP +E V VAG V+ AT Sbjct: 307 RSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGVMESVLVAGSNVARAT 366 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNA E+ R G+ IGD VV+R+AGDVIP++V V R R V PT CP CG+ + + Sbjct: 367 LHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPFVMPTECPSCGTTLVQ 426 Query: 418 V-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE------------ 464 EG+ RC +C AQ E L H +R A+DV+G+GD+ + + Sbjct: 427 EKEGDVDLRCPNKGLCPAQITERLAHVGARSALDVEGLGDESALAMTQPENDRDEVAAAL 486 Query: 465 -KEYVHTPADLFKLTAGKLTGL-ERMGPKSAQNVV-----------NALEKAKETTFARF 511 + T D LT L A+ ++ AL + Sbjct: 487 VAGHSVTLEDGTVLTLEGGRELPHGEQITRAEELLPAPQAPALRTEAALFDLRAEDLRDV 546 Query: 512 LYALGIREVGEATA-AGLAAYFGT----------------------------LEALEAAS 542 + +++ GE T YF T L LE A Sbjct: 547 MVWKPVKKKGEETGDWKQVRYFWTKAYKPRKLRGQTVFEPIEPTASKGTEKMLVELEKAK 606 Query: 543 IEELQK------VPDVGIVVASHVHNFF-------------------------------- 564 + L + + VG A + F Sbjct: 607 SQPLARVLVALSIRHVGPTAARALAEKFLSMDALRAASVEELSAVEGVGEEIGRSLRDWF 666 Query: 565 AEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL 624 + + V+ GV E AG TVV++G++ R+ AK + Sbjct: 667 TVDWHLEVLQAWARAGVRMADEA---PEPTSDVLAGLTVVVSGAMPGYDREGAKEAITSR 723 Query: 625 GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 G K GSVSKKT LV+AG AGSK AKA+ LG+ VI E + LL Sbjct: 724 GGKAVGSVSKKTSLVVAGPGAGSKAAKAEALGVPVITEQQFTDLL 768 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 224/672 (33%), Positives = 362/672 (53%), Gaps = 20/672 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ EL L Y+ + P + D EYD+ ++EL +LE K+P+ I +SPTQ++ Sbjct: 9 DIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNSPTQKL 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G+ F ++ H+ PMLSL +D + ++ L E + + E K+DGL++S Sbjct: 69 GSFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIEK-LVPIEDINFSIEPKIDGLSIS 127 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y +G L A TRGDG GED+T N+ I +IP + N A LEVRGEVFLP+A F+ Sbjct: 128 LHYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKII---NYDAELEVRGEVFLPKAEFQ 184 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+ + G K F+NPRNAA+G+LRQLDP I R L F Y + + + T Sbjct: 185 RLNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVEPQKHNIT-TQEQA 243 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L F+K +P + + E E A E + L +D DG+VIK+N+L ++G Sbjct: 244 LEFFQKLNIPTNPYHKVVEVEELEEA-ISFFAEMKNKLNYDADGLVIKLNNLTYWNKMGK 302 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A+ P+ ++AFK+ + ++ ++D++ VGRTG IT VA LEPV + +V ATLHN + Sbjct: 303 TAKFPKHSIAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQTIVRAATLHNYN 362 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 IE L + I D+V I +AG++IP+V+ +V + CP CGS + +E Sbjct: 363 FIEDLNININDQVQIVKAGEIIPKVLALVKKQSKG---VFGKTLECPSCGSVLVEIEDNV 419 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK- 481 C C ++ HF SR+++++ G+G + + V + D+F L K Sbjct: 420 DQFCVNK-NCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIFNLHKHKD 478 Query: 482 -LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL-- 538 L LER N++ + KAK++TF++ L+ALGI+ VGE A ++ + + L Sbjct: 479 ELLKLERYAELKVNNLLTNIGKAKDSTFSKVLFALGIKHVGERAAKLISKQYHNFDELIC 538 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 E + ++ + ++G + + + E N ++ + E ++ + +E+ Sbjct: 539 EKDELAKISAINNIGPKILDSLKEYLKNEENVKLLRKF-DEIFNYQKIATVASEK----L 593 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 + V+TG LS SRD + G KV+ SVS KT ++ GE AGSKL KA++L I Sbjct: 594 INLSFVITGKLSN-SRDHYVDLVEANGGKVSSSVSSKTSFLLVGEDAGSKLDKAKKLNIA 652 Query: 659 VIDEAEMLRLLG 670 +I+E + +L Sbjct: 653 IINEEQFNEMLK 664 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 235/688 (34%), Positives = 354/688 (51%), Gaps = 47/688 (6%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 IEQ++ +LR + H+ LY P I D+EYD++ EL LE KHPE +SPT+R+ Sbjct: 2 IEQKIKQLREEVMKHDLLY-DEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIY 60 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + + + +I+H PMLS D EE + F + D + + K DGL + + Sbjct: 61 SVVVDSLKKIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGD--------KEDGLTIVL 112 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y NG+ A+TRGDG GED+T VRTI +P K+ + LEVR E +P + FE+ Sbjct: 113 KYNNGIYYEASTRGDGYIGEDVTHTVRTITNLPKKI---SFKGYLEVRAESVIPFSEFER 169 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 IN D + +PRN +GS+R L+ I +R L+ + + EG +L Sbjct: 170 INVD------GKYKSPRNLVSGSVRTLNANIAKERGLSIIAFDLVKAEGITFEKD-TEQL 222 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKV----EEDRPTLGFDIDGVVIKVNSLAQQEQ 299 K+ G V + E + +E RPT+ IDG+V+K N+LA +E Sbjct: 223 EFLKEQGFNVVPYKVFKNTPEGIKELIQYCLTYNKEVRPTIPHMIDGLVLKFNNLAVRES 282 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG+ ++ PRW AFKF + + T + ++ VG++G ITP EPV + GV + A+L Sbjct: 283 LGYTSKFPRWGFAFKFDSLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASLA 342 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N D I+ +RIGD +V+ RA DVIPQ+V+ V R +E++ PT CPVC +V + E Sbjct: 343 NYDNIKERDIRIGDTIVVARANDVIPQIVSAVTELRDGTEKEILPPTCCPVCKGEVVKEE 402 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 C C AQ++ LKHFVSR AM++DG+G K ++ EK + + +D++ L Sbjct: 403 DNVHYFCINS-TCSAQQERILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLKD 461 Query: 480 --GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 KL+ L G K Q +++ +E++K ++FLYAL I VG +T +A F T+ Sbjct: 462 NLDKLSVLRGFGEKKIQKMLSGIEESKHVPLSKFLYALAIPNVGSSTGKDIAKKFKTMRH 521 Query: 538 LEAASIE------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 L S + EL K+ +G VAS + ++F E N +I L + G + Sbjct: 522 LIELSKDPVVLKTELMKIDGIGETVASSMVSYFEESHNIELIEFLYSIGFTMMEEVEEII 581 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG--------- 642 + GK V+TGSLS+ R+D K + G KV+GSVS KT+ ++ G Sbjct: 582 ASEEI--EGKIFVITGSLSK-PRNDIKKEIEARGGKVSGSVSAKTNFLVLGGYNHVTGEL 638 Query: 643 ---EAAGSKLAKAQELGIEVIDEAEMLR 667 E SK A + +I E E+ Sbjct: 639 PEKETNSSKYKNAVKFECPIISEEELFA 666 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 211/712 (29%), Positives = 363/712 (50%), Gaps = 57/712 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ESI++ + +L L E+ Y+V+ P + D YD R L E K+P+ + SPTQR Sbjct: 9 ESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG++ F +++H+ MLSL N F+ E L FN+ + + E + E K+DGL++ Sbjct: 69 VGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAK-ISKQEDNPYVLEPKIDGLSI 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y +GVL A TRGDG GE + +N++TI+ IPLK++ ++ +RGEV++ F Sbjct: 128 SLIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTT--IKKIVIRGEVYVSNQDF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E IN K FAN RN A+GSLR +D AKR L F Y + +T Sbjct: 186 EAINASRDE--DKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYEL-GFETQYQ 242 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + Q K+WG V+ + L + +E+ ++E ++ L + IDG VIK N+ E +G Sbjct: 243 VIQQLKEWGFNVAKEIKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIG 302 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + ++ P+WA+A+KF + T ++D+ VGRTG +T VA+L P+ + G +++ ATLHN Sbjct: 303 YTSKFPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNL 362 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I L +RI D V + +A ++IP+V+ V L +RP + +++ F +CP C + + E Sbjct: 363 EYINDLDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPEE 422 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV------------------ 463 C C ++ + L ++ S+ M+++G+ + + Sbjct: 423 VDWYCIYDQ-CKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITNQ 481 Query: 464 ---------------EKEYVHTPADLFKLTAGK----------------LTGLERMGPKS 492 E+ +V++ D+++L K L R KS Sbjct: 482 NVSEDLSLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEKS 541 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 ++N++ ++K R L AL I+ +G ATA +A + ++ L+ ++E+ ++ D+ Sbjct: 542 FDKLINSINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLADI 601 Query: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQM 612 + A+ + +FF++E N +I +L ++ I + + S + K V+TGS S Sbjct: 602 SSITANSLFSFFSDEKNWELIEQLKTLSINTKDEINNDLVDSSSIYYDKKFVITGSFSIS 661 Query: 613 SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEA 663 D K ++ K VSK D V+AG + + K+ +A+ L I +I E Sbjct: 662 RNDIIKKLSLKYKIKFVSGVSKNVDFVLAGNSPTAKKINQAKVLNIPIIQEE 713 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 270/634 (42%), Positives = 346/634 (54%), Gaps = 77/634 (12%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L + H+ YH DAP I DAEYD L R L +E + PEL + + V Sbjct: 18 QAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGAASVSV 77 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLA 120 GA F+++RH VPMLSL N F EE F +RV+ L +E + + E K+DGL+ Sbjct: 78 GAKASDKFAKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPKIDGLS 137 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YE G LV+AATRGDG GED+T+NVRTIR IP +L G+++P EVRGEV+L A Sbjct: 138 LSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVYLSHAD 197 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F IN G +FANPRNAAAGSLRQLDP ITA RPL FF Y G + +T Sbjct: 198 FAAINARQEEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAGEMSS-WPAETQS 256 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 G + F+++GLPV+ R C S E+LA Y +E +R LG+DIDGVV KV+ A Q +L Sbjct: 257 GLIGAFRRFGLPVNPRTKRCTSVAEMLAHYRAIETERAELGYDIDGVVYKVDEFALQRRL 316 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFVARAPRWA+A KFPAQ +T + +E VGRTG++ P+ARL+PV V GV+VSNATLHN Sbjct: 317 GFVARAPRWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGGVVVSNATLHN 376 Query: 361 ADEIERL-----------------------------GLRIGDKVVIRRAGDVIPQVVNVV 391 D I + +R+GD VV+ RAGDVIP+V +VV Sbjct: 377 EDYIRGIDADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAGDVIPKVADVV 436 Query: 392 LSERPEDTREVVFPTHCPVCGSDVERVEG------EAVARCTGGLICGAQRKESLKHFVS 445 L RP D FP CP CGS R ++V RCTGGLIC AQ +E L+HFVS Sbjct: 437 LERRPADAVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQGQERLRHFVS 496 Query: 446 RRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG---------------- 489 R A D++G G+ I L E V PADLF+L L Sbjct: 497 RNAFDIEGFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSAERALAAGKTP 556 Query: 490 ------------PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K+ N++ A+E + RF++ALGI +VGEATA LA +F + A Sbjct: 557 EAKKAKPKANEEDKAIHNLLAAVEARRTIPLNRFIFALGIEQVGEATAKALAKHFPDMPA 616 Query: 538 LEA-----------ASIEELQKVPDVGIVVASHV 560 L EL +P VG + Sbjct: 617 LMEGVRAAAACRPGPDWIELASLPRVGPTTRERL 650 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 38/249 (15%) Query: 448 AMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG--------------KLTGLERMGPKSA 493 A+ ++ +G+ L D+ L G +L L R+GP + Sbjct: 593 ALGIEQVGEATAKALA-----KHFPDMPALMEGVRAAAACRPGPDWIELASLPRVGPTTR 647 Query: 494 QNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD-- 551 + ++ A E + L + + A L A +G + L A L++ P Sbjct: 648 ERLLAAAEAGET----DLLADGAVTRLTSAQKEALLAAYGDRDGLRNAVERALRQKPGDA 703 Query: 552 ---------VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +G V + + FF+E N + LL E + F+G+T Sbjct: 704 YRHLADDSEIGAVTTASLIEFFSEAHNVEAVEALLRE----VRTERAGTPAAAAVFSGQT 759 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV TGSL +M+R +AKA LGAKV+GSVS KTDLV+AG AGSKL A++ G+ VI E Sbjct: 760 VVFTGSLERMTRSEAKATAERLGAKVSGSVSAKTDLVVAGPGAGSKLKDAEKHGVRVISE 819 Query: 663 AEMLRLLGS 671 AE L ++ + Sbjct: 820 AEWLAMVEA 828 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 250/594 (42%), Positives = 385/594 (64%), Gaps = 10/594 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ LR L + EYLY+V ++ D EYD L+ ELR+LE K+P LIT S TQ Sbjct: 1 MKLIKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKV-----TWCCELK 115 + + ++IRH+ PMLSL+++ D+ L F+KR++ +L N+ + +CCELK Sbjct: 61 SISNVCDNSLNRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELK 120 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRG 172 +DG+A+SILY+ G LV AATRGDG GE++T NV I +IP L N +P LE+RG Sbjct: 121 IDGVALSILYKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKNNNEILPDLLEIRG 180 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E+F+ + F K+N++ +G KVF+N RNAA+GSLRQLDP +T R L F CYG+ G Sbjct: 181 EIFISKLSFSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAG 240 Query: 233 -GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 +LP++H GRL +WGL +++ + + + VL +Y+ V + R L + IDG+VIK+ Sbjct: 241 LKQLPNSHWGRLKLCNRWGLSINNYIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKI 300 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 ++ Q+QLG RAP WAVA+KFPA+ ++T + DV F+VGRTG ITP+A + PV + V Sbjct: 301 DNCIYQDQLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNV 360 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 ++ +HN +E++RL L IGD V+++R+GDVIP+++ ++L R ++ + + P CP C Sbjct: 361 IIKKVNMHNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSC 420 Query: 412 GSDVERVEGE-AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 GS ++ + + +V RC L C AQRK +LKHF SR+AM++ GMG ++I+QLV+K + T Sbjct: 421 GSILKVEDNKSSVLRCLAKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLICT 480 Query: 471 PADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA 530 P D F L+ KL L+R G KSA+ ++ ++ AKE T + F+YALGI VGE+ + LA Sbjct: 481 PVDFFSLSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLAY 540 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 + T+E L A ++ ++ +G + A ++++F + N N I L+ + + Sbjct: 541 MYRTIENLMNADLQSFLQLKFIGKIAAMNIYSFLHQSDNYNNIQGLIRSNLIFK 594 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 236/678 (34%), Positives = 350/678 (51%), Gaps = 43/678 (6%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+ + D YDRL+R ++ E +HP+ + P SPT +V + + H VPMLS Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKVAGGAVVG--DVPHTVPMLS 87 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTT 141 LDNVF + ++ RL W E KLDGLA++ Y G LV TRGDGT Sbjct: 88 LDNVFGAGQLADWAASLERRLGR-PVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGTA 146 Query: 142 GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRN 201 GED++ + TI +P +L P +E+RGEV + + FE + G FANPR+ Sbjct: 147 GEDVSHAIGTIVGLPARLAE---PVTVELRGEVMMTASQFEDACVKRQAHDGTTFANPRS 203 Query: 202 AAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT-------HLGRLLQFKKWGLPVS 254 AAAG+LR D + LTFF YG H + G+ Sbjct: 204 AAAGTLRAQDRPYVCE--LTFFGYGALPYPDDTSEQAVQLRELPHSEVMTWVAGQGVQTP 261 Query: 255 DRVTL----CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 + + E++ ++ R L F IDG+VIK + A Q Q GF +RAPRWA Sbjct: 262 AVTDVGGIVATTLEQIQERVEQIAAKRTELPFGIDGIVIKCDLAADQAQAGFSSRAPRWA 321 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+K PA E++T + VE+ GR+G I P A LEPV + G +V+ ATLHN +I R GL Sbjct: 322 IAYKLPATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLHNVADITRRGLM 381 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 +GD VV+ +AGDVIP+V V+ R D + + P CP CG ++ + RC G Sbjct: 382 LGDSVVVYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCPTCGDAIDASQER--WRCVRGR 439 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C + S+ + R +D++G+ + I QL++ + ADLF LT ++ GLERMG Sbjct: 440 AC--RVIASIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTREQVLGLERMGA 497 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 S N++ A+E+AK +R ALG+R G + + +A +FG+++A+ AA E ++ V Sbjct: 498 TSTDNLLAAIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIRAADAEAIEAVE 557 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-------------- 596 +G A V E + ++I +L+ GV P E + Sbjct: 558 GIGPKKAPGVVAELVELA--DLIDKLVKAGVTMTEPGWTPPAEPGADAQADPEAGGTSGL 615 Query: 597 PFAGKTVVLTGSLSQ----MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 P AG +VV+TG++S ++R++ + G K + SVS KT L++AGE AGSK AKA Sbjct: 616 PLAGMSVVVTGAMSGALEALTRNEMNELIERAGGKASSSVSAKTSLLVAGEKAGSKRAKA 675 Query: 653 QELGIEVIDEAEMLRLLG 670 + LG+ ++ E L+G Sbjct: 676 ESLGVRIVGPEEFAGLVG 693 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 210/673 (31%), Positives = 352/673 (52%), Gaps = 20/673 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I + +L+ + Y D P + D+ YD + +L + E ++ L DSPT+ Sbjct: 14 NRIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKN 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GA FS+++H+ PMLSL+ + + F + + + ELK+DGL++ Sbjct: 74 IGAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINKL---GFFPNYFLELKIDGLSI 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y+NG L+ A TRGDG +GED+T NV I+ IP ++ +E+RGE++L ++ F Sbjct: 131 SLKYDNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKYSKP---IEIRGEIYLSKSTF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +INE + +FANPRNAA+GSLRQLD I +R L F Y V ++ + + Sbjct: 188 YEINECQKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHKIKNFNDQ 247 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED--RPTLGFDIDGVVIKVNSLAQQEQ 299 L K+ V ++ E+ F E++ R L ++IDG+V+KV+ + + Sbjct: 248 EL-FLKENNFQVPSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDDFSLYDI 306 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG ++ PR +AFKF T + D+ VGRTG IT A LEPV + G LVS ATLH Sbjct: 307 LGQTSKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAATLH 366 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N + +E L L D V I +AG++IP+VV++ + +C C + + E Sbjct: 367 NYEYVESLKLNKNDNVKIIKAGEIIPKVVSL---SKKNSETIFKRIEYCTSCNEKLVQPE 423 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E C C R ++HF S++AM++ G+G + I++ + + +DLF L Sbjct: 424 DEVDQYCINK-KCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLFFLEK 482 Query: 480 GK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K + G KS N++ ++ ++K + +F++A+GI+++GE +A +A L Sbjct: 483 YKNLIESQPSFGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVKLLSN 542 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L E+L + D+ + + FF++E+ I +L G+ + + E Sbjct: 543 LINFDFEKLNNIRDISCKTINSLKCFFSDENEIEEIKIILELGLDFKN---LENEFESKK 599 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG- 656 G V+TG+LS+ RD K +++ G V S+S + + ++ GE +GSK+ KAQ++ Sbjct: 600 LQGLNFVITGTLSK-PRDFFKELIIKNGGNVLNSISNRINYLLTGEKSGSKIEKAQKINT 658 Query: 657 IEVIDEAEMLRLL 669 I+++DE E +L+ Sbjct: 659 IKILDENEFNKLI 671 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 261/596 (43%), Positives = 345/596 (57%), Gaps = 38/596 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++L L L H+ YH DAP I DAEYD L R ++E + P L+ +SP+ RV Sbjct: 13 QAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNSPSMRV 72 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAV 121 GAA FS + H VPMLSLDN F + F+ R++ L+ NE V + E K+DGL+ Sbjct: 73 GAARAEQFSPVEHGVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKIDGLSA 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-----PARLEVRGEVFL 176 S+ YE GVLV ATRGDG GED+T+N+RTI IP +L G + P +E+RGEV++ Sbjct: 133 SLRYEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIRGEVYV 192 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 F N A G + +ANPRN AAGSLRQ+DP+I+A+RPL FF Y G+ G Sbjct: 193 ELEAFAAFNAAALEAGQRTYANPRNFAAGSLRQIDPKISAQRPLRFFAYAWGLTSEG-FA 251 Query: 237 DTHLGRLLQFKKWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 T L + + WG + + A+ +L Y K E +RP L FDIDGVV KV+ L Sbjct: 252 ATQWEALGKLRDWGFVTTAPPAERVQDAQGLLDIYAKFEVERPKLAFDIDGVVYKVDDLE 311 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 QQ +LGFV+R+PRWA+A KFPAQ+ T + ++ QVGRTGAITPVARL+PV V GV V+N Sbjct: 312 QQRRLGFVSRSPRWAIARKFPAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGVSVTN 371 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG--S 413 ATLHNADEI R +RIGD V+++RAGDVIPQ+V VL ERP FPTHCP C + Sbjct: 372 ATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLEERPAGAVPFEFPTHCP-CHLET 430 Query: 414 DVERVE-----GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 + R V RC+G C QR E L+HFVSRRA D++G+G+K + E+ ++ Sbjct: 431 PLVRESTAAGAETVVRRCSGEFACPFQRIEHLRHFVSRRAFDIEGLGEKQLAAFFEEGWI 490 Query: 469 HTPADLFKLTAG-----KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 PAD+FKL +L + G S N+V +E + R +Y LG+R++GE Sbjct: 491 KEPADIFKLARDEAKLAELRERDGYGETSVANLVKGIEARRTIGLDRVIYGLGMRDIGET 550 Query: 524 TAAGLAAYF------GTLEALEAASIE-----------ELQKVPDVGIVVASHVHN 562 T+ LA F G E L+AA+ EL P VG + Sbjct: 551 TSTVLARNFASPKGKGGFEDLQAAAERAAGQLPGAVYLELAGAPGVGPKARDELVE 606 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 21/207 (10%) Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFA------RFLYALGIREVGEATAAGLAAYFGT 534 +L G +GPK+ +V A + + + ++ + LA +G Sbjct: 589 ELAGAPGVGPKARDELVEAGKGGLKADPWPEADSLEVKIGHAVPKLSKPARVALAERYGD 648 Query: 535 LEALEAASIE-----------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 + A + +L + +G V A + FFAE NR ++ L+AE Sbjct: 649 WDTFAQALAQAGQGAPGEDYLQLAAIDGIGPVAAQSIARFFAEAHNREKVANLIAELDIQ 708 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 P + + D+ AGKT+V TG+L +M+RD+AKA+ LGAKVA SVSKKTDLV+AG Sbjct: 709 P----VAKPKTDTAVAGKTIVFTGALEKMTRDEAKAQAEGLGAKVASSVSKKTDLVVAGP 764 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AGSKL A ELGI+V+ E E L ++G Sbjct: 765 GAGSKLKTATELGIQVMTEDEWLAMVG 791 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 208/682 (30%), Positives = 356/682 (52%), Gaps = 32/682 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +E+++ +LR + H+ Y P I D EYD+L +L LE +PE +SPT+ Sbjct: 1 MNKVEEKIRDLREEVIKHDLAY-AKGDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTK 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+ + ++ H +PMLS + + F +++ D L E KLDGL Sbjct: 60 RIIDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDEL--------LVEDKLDGLT 111 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V Y NGVL TRGDG G+DIT V IP + + LE+R E +P Sbjct: 112 VIAKYNNGVLYEGITRGDGKIGDDITHIVLNTPNIPKTIPFNDY---LEIRLEGIIPNED 168 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N + + RN A+G++R L+ + +R L + + + + + Sbjct: 169 FEMVNSILEEEDK--YKSSRNLASGTVRSLNGCVAKERGLKLIAFELVKADNI-IFEKDY 225 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKV----EEDRPTLGFDIDGVVIKVNSLAQ 296 RL K G V + ++ E++L + +E RP L + +DG+VIK NSL Sbjct: 226 ERLEFLKTLGFDVVNYTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKANSLEL 285 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++ LG ++ P+W+ AFKF +E +T ++D +VG++G +TPVA EPV + G+ +S A Sbjct: 286 RDSLGNTSKYPKWSSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITISKA 345 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TL N ++ ++IGD VV+ RA DVIP++ + + +R + +E+ P CPVC + Sbjct: 346 TLSNFKNVKDKDIKIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCNEPIV 405 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + C C AQ + + HFVS++++D+DG+G++ I ++ + + D+F Sbjct: 406 KE--NVHYFCVND-DCPAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSIIDIFY 462 Query: 477 --LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L L++ K N++ +E +K+ + ++ L+ L I+ +G + LA F + Sbjct: 463 LKDKKDDLLKLDKYADKKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELANKFIS 522 Query: 535 LEALEAAS------IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 ++ + S + + + + G +++++ FF +E N +I++L+ G IV Sbjct: 523 MKNILNISKNEEEFKQSILSINNFGEEMSNNLVLFFKDERNIELINKLMEVGFKMEEQIV 582 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLV-ELGAKVAGSVSKKTDLVIAGEAAGS 647 EE ++ GKTVV+TG + +R++ ++ E G K + SVSKKTD +I G+ AGS Sbjct: 583 KVNEE-ENMLTGKTVVITGKFTDFTREELTEKIENEFGGKCSKSVSKKTDFLIYGDKAGS 641 Query: 648 KLAKAQELGIEVIDEAEMLRLL 669 K KA ELG+++I E E+L ++ Sbjct: 642 KYNKALELGVKLITEKELLDII 663 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 215/678 (31%), Positives = 341/678 (50%), Gaps = 37/678 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ME Q++ EL L Y+ D + D E+D EL++LE + E+I +SPTQ Sbjct: 1 MEDKTQRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLEQE-TEVILSNSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG + ++ H +P+ SL + F K DGL Sbjct: 60 KVGYEVKSKLDKVVHNIPLKSLGKTKSIDDLQKFI----------GNNEILIMDKGDGLT 109 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++Y+NG L+ +TRG+G GEDIT NV+T + IPL++ + L++ GE + Sbjct: 110 CELIYDNGQLLQGSTRGNGEIGEDITHNVKTFKNIPLQI---DFKGYLKLSGESVILDED 166 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE IN ++N RN AGS+RQLD +I KR + F+ + + E T Sbjct: 167 FELINAKLDEEDK--YSNSRNLVAGSVRQLDSKICDKRNVRFYAFSLLECGEAEF-KTKE 223 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +L + G + + +++EE+ K+++ GF IDG+V N++ L Sbjct: 224 EQLEFLSRLGFETIEYIKY-DNSEELEQVISKMQKSAYEKGFPIDGLVFAYNNIEYANSL 282 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G P ++A+KF +E T E+QV RTG I PVAR EPV + G +V ATLHN Sbjct: 283 GDTLHHPLHSIAYKFYDEEYETKYIATEWQVSRTGMINPVARFEPVEIEGSVVERATLHN 342 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-- 418 D E L L GD + + +A VIP+V++ E + PT CPVCG E Sbjct: 343 LDYFEDLKLGQGDTIKVIKANQVIPKVMSNDTMSNTE-----IIPTECPVCGGKTEEKLL 397 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + V C C A+ + H+ SR AM++DG+ +K I++ V Y+ D++KL Sbjct: 398 KTARVLICINPE-CSAKHISRIVHYCSRNAMNIDGLSEKTIEKFVNLGYLKDIDDIYKLE 456 Query: 479 --AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 ++ ++ G KS N++ A+EK+K F++ALG+ VG TA L F ++E Sbjct: 457 QYKEEIINIDGFGTKSYNNMIEAIEKSKHCKLENFIFALGVPSVGLGTAKLLVKKFKSIE 516 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFF-AEESNRNVISELLAEGVHWPAPIVINAEEID 595 + ++EE+ + +G VV + ++N+F + + N++++LL E Sbjct: 517 KVMNCNLEEIYSIDGIGDVVGNEIYNYFIINKDSINLVNKLLKF-----IDFEEVKESSS 571 Query: 596 SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKA 652 + GKT V+TG + +R++ KA++ E+G KV GSVSKKTD +I E+ SK KA Sbjct: 572 NKLEGKTFVITGDVHVFKNRNEVKAKIEEMGGKVTGSVSKKTDYLINNDVESTSSKNQKA 631 Query: 653 QELGIEVIDEAEMLRLLG 670 ++L I +I E E + ++ Sbjct: 632 KDLNIPIITEEEFVEMIK 649 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 244/684 (35%), Positives = 350/684 (51%), Gaps = 52/684 (7%) Query: 26 DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNV 85 + D YDRL R + E HPE + DSPT +V + H VPMLSLDNV Sbjct: 42 GESALDDDAYDRLARGIAAYEADHPEEVLADSPTGKVAGGAAVG--DVPHTVPMLSLDNV 99 Query: 86 FDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 F E F+ + ++ R+ W E KLDGLAV+ Y +G TRGDGT GED+ Sbjct: 100 FSAEQFVTWTASLERRIGR-PVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDV 158 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 + + +P +L P +EVRGE+ + F + N GG FANPRN AAG Sbjct: 159 SHAAGAVVGLPERLAE---PVTIEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAG 215 Query: 206 SLRQLDPRITAKRPLTFFCYG-VGVLEGGELPDT-----HLGRLLQFKKWGLPVSDRVTL 259 +LR D + TFF YG + + + GEL + H L G+ + + Sbjct: 216 TLRAKDRAYRVET--TFFAYGALPLPDSGELGEALAELPHSEVLAYVAGLGVHTAAGTAV 273 Query: 260 C----ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 + EEV A + R L F IDG+VIK + A Q++ G RAPRWAVA+K Sbjct: 274 APLRATTVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKL 333 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKV 375 PA E++T + VE+ VGRTG I P A LEPV + G V ATLHN +I R LR+GD+V Sbjct: 334 PAVEKITRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQV 393 Query: 376 VIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 ++ +AGD+IP++ V+ R D + FP CP CGS+++ E RCT G C + Sbjct: 394 MVYKAGDIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEIDASEQR--WRCTRGRDC--R 449 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 S+ + R +D++G+G + QLV+ V ADLF L +L L+RMG S N Sbjct: 450 LVASVSYAAGRDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDN 509 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 ++ A+E A+ +R ALG+R G + + +A +F T++ + AA E LQ+V +G Sbjct: 510 LLAAIETARTRPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKE 569 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS------------------- 596 A+ V E + +I +L+A GV P + + Sbjct: 570 KAAAVVAELVELA--PLIGKLVAAGVSMTEPGATPPPDPGTEEAAAPATADAGAPGGDAA 627 Query: 597 -----PFAGKTVVLT----GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 P AG TVV+T G+L ++SR+ + G K + SVS++T L++AGE AGS Sbjct: 628 TGSALPLAGMTVVVTGAMSGALEKLSRNQMNELIERAGGKSSSSVSRRTTLLVAGEKAGS 687 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 K AKA++LG+ + E L+G+ Sbjct: 688 KRAKAEDLGVRIAVPEEFAELVGA 711 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 251/639 (39%), Positives = 348/639 (54%), Gaps = 74/639 (11%) Query: 104 NNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN 163 E++ W E K+DGLAVS+LYENGV ATRGDG G++IT N++T+R+IPL+LHG+ Sbjct: 3 PGEQLEWLVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKG 62 Query: 164 IPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFF 223 P LEVRGEV+LP AGF++I E+ G + FAN RN AAG+L+QLDP + AKRPL Sbjct: 63 APEVLEVRGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIV 122 Query: 224 CYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFD 283 YG+G + + P T L K +GL +C +AEEV+ +++ R GF+ Sbjct: 123 LYGLGEIS-VDPPPTQAALLEWMKAFGLRTPKFTRVCHTAEEVMKAIDELDSIRDGFGFE 181 Query: 284 IDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARL 343 DG VIK+NS+ Q+E++G+ +RAP+WA A+K+ +++ T + + QVGRTG +TPVA L Sbjct: 182 TDGAVIKLNSIEQRERVGYHSRAPKWAKAWKYVSEQAETVLESITIQVGRTGVLTPVAEL 241 Query: 344 EPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV 403 PV + G +S ATLHN DEI+R +RIGD V+I +AG+VIP VV VVL +RP + Sbjct: 242 RPVFLRGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFP 301 Query: 404 FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV 463 FP CPVC S +R AV C + C AQ L++F R A+D+DG+G + D+LV Sbjct: 302 FPHECPVCHSQAKRDPNFAVWVCEN-VNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLV 360 Query: 464 EKEYVHTPADLFKLTAGKLTGLE--------RMGPKSAQNVVNALEKAKETTFARFLYAL 515 E+ V P DLF+L +L L G K+A V A+++AK AR+L+AL Sbjct: 361 ERSLVRDPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHAL 420 Query: 516 GIREVGEATAAGLAAYFGTLEALEA----ASIEELQKVPDVGIVVA---------SHVHN 562 I EVGE TA LA + +LEA+ + L ++ + + Sbjct: 421 AIPEVGEETAHDLAKHHPSLEAVRDSAMLRDVVALDRLHGEAEESNPRGKRNKDKTELEK 480 Query: 563 FFAEESNRNVISE-------LLAEGVHWP------------------------------- 584 + VI+E LL G P Sbjct: 481 QKLASRHAEVIAEANAAGRRLLEAGFAAPAKKKSATDADVVTVVGPVVAQAALHWFAGES 540 Query: 585 -------------APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGS 631 AP D FAGKT VLTG+L +M R+ A ++ LG V+ S Sbjct: 541 GHETLKRLHHLHIAPKGATPGAGDQAFAGKTFVLTGTLEKMGRNAAAEKIRALGGNVSSS 600 Query: 632 VSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 VS+KT V+AG AGSKL AQ LG+ V+ E + L++L Sbjct: 601 VSRKTSYVVAGPGAGSKLEDAQSLGVTVLSEDQFLKMLA 639 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 245/679 (36%), Positives = 348/679 (51%), Gaps = 35/679 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +++ EL + Y+ AP + DAEYD + ELR L HPEL +P +V Sbjct: 2 DAGERIRELADRIVELRTAYY-EGAPLVADAEYDAVEDELRALIAAHPELAPDPNPLDQV 60 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + +RH PMLSL+ E AF +R KLDGL+++ Sbjct: 61 GA-PAVLHAPVRHSRPMLSLEKATTPEQVAAFFERF-------PGQPVVVMPKLDGLSLA 112 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRT-IRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE+G LV A TRGDGTTG+D+T VR + +P ++ ++P R+EVRGE + ++ F Sbjct: 113 LVYEDGRLVRAVTRGDGTTGDDVTMLVRALVDGVPEQI---DVPGRVEVRGEAVMLRSTF 169 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 N K NPRNAAAG+LR DP A+R L FF + + EGG D G Sbjct: 170 LAYNA---AHPDKPLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLGEG 226 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + G+ + +C AE+ A +E R L +DIDG V+++ G Sbjct: 227 ----LRALGI-AGAAMRMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAAAG 281 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR A+AFKF A+E+ T + V + VG+TG I PVARLEPV V G V+ ATL N Sbjct: 282 TRSNSPRGALAFKFAAEEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLANQ 341 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEG 420 I +++GD V++RRAGDVIP V V+ S+R E+V PT CP CG V Sbjct: 342 QVIRARDIKVGDTVLVRRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQGN 401 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 CT C AQ L H+ SR A D+D +G I++L E + P+D + LT Sbjct: 402 SRELFCTNA-SCPAQTVRRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLTKE 460 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEALE 539 +L +R+G SA ++ +++++++ R L L I E TAA LA F +LE + Sbjct: 461 RLLEFDRIGEVSATRMIESIDRSRDVGLRRALIGLAIPMASEGTAARLARAGFASLEEVA 520 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP--APIVINAEEIDSP 597 A E L V D+G VA+ + R + L GV + +P Sbjct: 521 DAGEERLVAVEDIGPKVAASLVEHLTRL--RPELERLRERGVSLDVREEDLPPVVAAGAP 578 Query: 598 FAGKTVVLTGSLSQMS------RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLA 650 AGKTVV+TG++S R + + GA A SVS TDL+I G G SKLA Sbjct: 579 LAGKTVVVTGAISDPRSGEKVARPTFQRLCEKAGATAASSVSANTDLLITGAGVGESKLA 638 Query: 651 KAQELGIEVIDEAEMLRLL 669 KA++LG+E++D+A + L Sbjct: 639 KAEKLGVEIVDQATIWAQL 657 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 201/681 (29%), Positives = 343/681 (50%), Gaps = 43/681 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ ++ ++ EL L + Y+ ++ DAEYDRL EL ELE + ++ +SPTQ Sbjct: 14 MDKVK-RIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENE-TGVVYTNSPTQ 71 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG + +++H PMLSLD + + F LK+DGL Sbjct: 72 SVGYEVKSELEKVKHSHPMLSLDKTKSVDDLVKF----------AGDKDCILSLKMDGLT 121 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + YENG LV A TRGDG GE IT N + IPL + + E+ GE + Sbjct: 122 CLLTYENGELVQAETRGDGEIGELITHNAKVFENIPLSI---DYKGHFEIEGEAIITYED 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+KIN+ K + NPRN A+GS+RQLD +I A+R + F + V + + Sbjct: 179 FDKINKSL--PDDKKYKNPRNLASGSVRQLDSKIAAQRHIKFIAWKV---PTDIASSSFI 233 Query: 241 GRLLQFKKWGLPVSDR--VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL G + +AE + ++ + F IDG+V N + E Sbjct: 234 NRLQYALDIGFDTVPFLPIRGNCNAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGE 293 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG P+ ++AFKF + T +R++E+ +G+TG +TPVA + V +AG VS A+L Sbjct: 294 SLGMTGHHPKHSIAFKFAEDSEETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASL 353 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD--VE 416 HN ++ L + IG V + + ++IPQ+++ + D PT CPVCG + + Sbjct: 354 HNISIMKELNISIGSTVTVVKKNEIIPQIISCDANAMDAD-----IPTTCPVCGGETRIV 408 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + V C C + + HFVS++ MD+ G+ ++ I +L+E ++ D++ Sbjct: 409 KENDSEVLMCVNPH-CKGKLLGRVSHFVSKKGMDISGLSEETIKKLIELGWITEITDIYN 467 Query: 477 LTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L +L+ + G KS + ++E +K +F+ +L + +G + + L FGT Sbjct: 468 LDQYYDRLSTMSGFGKKSVDKLRTSIENSKTVRLDKFIASLSVPGIGTSQSKELVKAFGT 527 Query: 535 LEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + AS+ + ++ G V+ +++H++F + SN I++ LA + + + + Sbjct: 528 WDKFRDASVGYYDFTQLDGFGDVLNNNIHSWFEDMSN---IADYLASLMTFESE---DNS 581 Query: 593 EIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKL 649 + ++ GK+ V+TG + + +RD+ K + + G KV GSV+K T +I E+ SK Sbjct: 582 KTNNSLNGKSFVVTGKVYKFKNRDEVKEAIEKFGGKVTGSVTKSTFALINNDIESNSSKN 641 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA+ELG+++I+E +++ +LG Sbjct: 642 KKAKELGVQIINEEQLIEMLG 662 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 222/544 (40%), Positives = 318/544 (58%), Gaps = 13/544 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ + L L H+ Y+V P I D EYD+L+++LR +E +HP + SPTQR Sbjct: 4 DTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLD 117 VG +P+++F ++ EVPMLSLDN +DE F++RV L V + E K+D Sbjct: 64 VGHSPISSFPKVVREVPMLSLDNTYDESELADFHQRVLRGLGLSGDEAGAVNYVVEPKID 123 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 G+ V + YE G TRGDG GEDI+ N+RT+R +PL+L E L VRGE F+ Sbjct: 124 GIGVELSYERGAFRLGTTRGDGRVGEDISQNLRTLRGLPLRLREE---VDLIVRGEAFMT 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 +A F +NE G + F NPRN AGSL+QLDPR+ A+RP+ Y V + G Sbjct: 181 RADFTALNEARAEAGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEV--VGGERFAR 238 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H L + ++ GLP S+ + +S + E R L FD+DG+VIKVNS Q+ Sbjct: 239 EHFEVLARLRELGLPTSEHNSRADSWAALKREVAAWAERRAELPFDVDGLVIKVNSFDQR 298 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG ++ PRWA+A+KFPAQ+ T + D+E VGRTGA+TPVA L PV V+G V A+ Sbjct: 299 DALGTTSKFPRWAIAYKFPAQQVTTVIEDLEVNVGRTGAVTPVAMLTPVEVSGTTVQRAS 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN D+IERLG+ D+V++ +AG++IPQV+ VV + P+ CP CG + + Sbjct: 359 LHNWDQIERLGIGPKDRVLLEKAGEIIPQVIAVVER---ASEQVFPRPSTCPSCGHGLIQ 415 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 G C L C Q SL+ F R M++DG+G+K+ L++ V ADLF L Sbjct: 416 EPGRVALLCPNRLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLVSNVADLFAL 475 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAK-ETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 + L LER G +SAQN+V+A+ +A+ TF+R L ALG+ +G A +AA++ ++ Sbjct: 476 SKEDLLTLERFGEQSAQNLVDAIARARDSATFSRLLAALGVAHIGGVAARAIAAHYPDMD 535 Query: 537 ALEA 540 AL A Sbjct: 536 ALLA 539 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L ++ VG ++AS + +F + R V+ L GV+ P + +GK +V+ Sbjct: 627 LGEIEGVGRIMASSLESFLRDPEAREVLRLLRERGVNPREPAT--EVTGEGVLSGKRLVI 684 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAE 664 TG+LS+ R D K + G KV GSVSK+T ++AG GS KLA A++ G+ VIDEA Sbjct: 685 TGTLSR-PRSDIKKAIEAAGGKVTGSVSKQTAYLVAGADTGSAKLASAEKYGVPVIDEAA 743 Query: 665 MLRLLG 670 + LL Sbjct: 744 LDALLA 749 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 215/676 (31%), Positives = 333/676 (49%), Gaps = 38/676 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I ++ EL L Y+ + D EYD L EL +LE + +I S TQ Sbjct: 37 MDKI-NRMKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLEKE-TGVILNGSRTQ 94 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG ++ ++++H MLSLD + + L +E KLDGL Sbjct: 95 QVGFEVASSLTKVKHTSRMLSLDKTKSIDELTEW-------LGGHEGF---LSWKLDGLT 144 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + ++NG L A TRG+G TGEDIT N R I IP K+ E L VRGE + Sbjct: 145 LVLTFDNGTLTQAVTRGNGETGEDITMNARHIIGIPAKIPFE---GHLVVRGESLMKYKD 201 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N G + NPRN G++R LD ++TA+R + FF + + +G E ++ Sbjct: 202 FERVNSLIE--DGSKYKNPRNLCVGTVRNLDSKVTAERNINFFAFNLVSADGYE-SNSFA 258 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 R+ G V + S + + E+D F DG+V+ ++ +A L Sbjct: 259 ERIQWLNSLGFQTVYGVKVDSSV--LAEKVAEFEKDIVNNEFPSDGLVLMLDDVAYGRSL 316 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G + APR +AFK+ + T +R++E+ RTG + PVA +PV + G VS A++HN Sbjct: 317 GETSHAPRNGMAFKWRDETADTTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRASVHN 376 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE---R 417 +++L L IGD + I +A +IPQV+ E + P CP+CG E Sbjct: 377 VSIVKQLKLGIGDTLSIYKANMIIPQVL-----ENKTGSASAAIPEVCPICGEKTEIKTS 431 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + CT C A+ +HFV R AM++ G+ I+ V + +V +D + L Sbjct: 432 DDDVETLFCTNKE-CPAKHIGRFEHFVQRDAMNIVGLSTATIETFVSEGFVKKYSDFYHL 490 Query: 478 T--AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 K+ +E G +S Q + A+E ++ T +R LYA+GI +G A + + A + + Sbjct: 491 DRFREKIVTMEGFGERSYQKMQEAVEASRHTEMSRILYAVGIPNIGRAASRLICAEYPDV 550 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 A+E + EEL + +G V+A+ FFA E N ELL E V D Sbjct: 551 NAIEKLTAEELTAIDGIGEVLANDYVKFFANEDNLTEYHELLTELDIAEPEAVSE----D 606 Query: 596 SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKLAKA 652 SP AGKT V+TGS++ +R++ KA + +G KV+GSVS KT +I + + +K A Sbjct: 607 SPIAGKTFVITGSVNIWKNRNELKAYIESMGGKVSGSVSSKTSYLINNDSQSNSTKNKTA 666 Query: 653 QELGIEVIDEAEMLRL 668 + L + +I E E L Sbjct: 667 KSLNVPIITEEEFREL 682 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 211/705 (29%), Positives = 353/705 (50%), Gaps = 58/705 (8%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPD----SP 58 I ++ ELR + + Y+ + P + D YD+ +REL +LE ++ L + + SP Sbjct: 6 QIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQSP 65 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 +Q+VG+ + F ++ H PMLSL+ + E + K+ ++ LK VT+ E K+DG Sbjct: 66 SQKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILKT---VTFFVEPKIDG 122 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA--IPLKLHGENIPARLEVRGEVFL 176 +A+S+ Y+NG L+ A TRGDG GE++ N I IP K+ N LEVRGE+++ Sbjct: 123 IALSLFYQNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKI---NYLEDLEVRGEIYI 179 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQ---LDPRITAK-----------RPLTF 222 + F + + K F NPRNAA+G LR+ P+I AK R L Sbjct: 180 DNSTFASL-----QLETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRYLKS 234 Query: 223 FCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 F Y + E ++ ++ + + G V+ C ++V F +++ R L + Sbjct: 235 FFYTLVNPEKHKI-NSQFDSINFLRNLGFQVNPFQKKCSDLKDVFNFISIIKQKRDFLNY 293 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 +IDGVV+KVN + E+LG ++ P A+AFKF T + + +GRTG +T A+ Sbjct: 294 NIDGVVVKVNEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTYNAK 353 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 +EPV +AG +S+A L N IE L L + +V I++AG++IPQ++ V + + Sbjct: 354 IEPVTLAGSKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSVHNYPKTN---F 410 Query: 403 VFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQL 462 +CP C S++ E C C + + HF S+ A++++ + K I++ Sbjct: 411 SIVKNCPKCNSELVNSESGLDQFCQNQF-CPEIILQKIVHFCSKNALNIESLAQKRIEKF 469 Query: 463 VEKEYVHTPADLFKLT------------AGKLTGLERMGP----KSAQNVVNALEKAKET 506 +EK + + D+F L +L + KS ++N +E+AK Sbjct: 470 LEKGLISSACDIFYLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERAKNI 529 Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 F R ++ LGIR VG A L+ Y L L L+ D G V+ + ++F Sbjct: 530 DFYRLIFGLGIRNVGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDYFNN 589 Query: 567 ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGA 626 + N ++ L G ++ + N + FA ++G LS+ RD+ + E GA Sbjct: 590 QKNSEQLNCLETVGFNFKTTFLTNQSNSWASFA-----ISGKLSK-PRDEYVRIIEESGA 643 Query: 627 KVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 SV+KKTD ++ G++AGSK+ KA++ GI++I+E + L+ + Sbjct: 644 SFHESVTKKTDFLLLGQSAGSKIEKAKKAGIKIINEVQFFDLIKN 688 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 209/681 (30%), Positives = 345/681 (50%), Gaps = 29/681 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ IE ++ LR +R Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 10 IKDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTL 69 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR-VQDRLKNNEKVTWCCELKLDGL 119 + G+ L F ++ H P+LSLD +D + L + ++ V + E K+DG Sbjct: 70 KFGSDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGC 129 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NVRTI+ +PL + + L +RGE+++ + Sbjct: 130 SIVLYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSI---DEKVELVLRGEIYITKE 186 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + N RN A+G LR+++ R A PL F Y + G T+ Sbjct: 187 NFLKINHTL----KNPYLNARNLASGILRRINSREVASFPLDIFVYDILYSSFG--LSTN 240 Query: 240 LGRLLQFKKWGLPVSDRVTLC--ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + KK+G ++ ++ EE+ K+E R +L ++IDGVV+KV+S + Sbjct: 241 HDAFDKLKKFGFKINPFCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILR 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG+ + P+W+VA+KF + ++ + D+ QVGR+G ITPVA +E V VAG ++NA+ Sbjct: 301 DILGYTSHHPKWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN D I+ +GL +GD V I R GDVIP V VV ++CP C + + Sbjct: 361 LHNQDYIDSIGLNVGDVVAISRRGDVIPAVELVVEKLSIGS---FKISSNCPSCKMALIK 417 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 C C + E +K+F S++ M++ G+ K I+ L E +++ + +L+ Sbjct: 418 EGSH--LFCVNKH-CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTF 474 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY------ 531 +L L K N+ ++ +K F + L +GI+E+G T L Sbjct: 475 NFDRLINLRGFDLKRIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFD 534 Query: 532 -FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 TL + A++ +L K+ +G +A ++ F ++ + + G N Sbjct: 535 IISTLCKNKEAALAKLLKIKGIGEKIALNIIEAFNDKIILDKFNFFKELGFKLE-EYNTN 593 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 DS GK +TGS SRD ++ + GA +V+K+ D ++ GE G KL Sbjct: 594 YVVDDSFLFGKKFCITGSFEGHSRDVLIEKITKKGAIFNRAVTKRLDFLLVGEKPGLKLQ 653 Query: 651 KAQELGIE---VIDEAEMLRL 668 KA LGI+ + D + + L Sbjct: 654 KANNLGIKTFGLFDIKDFVDL 674 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 227/584 (38%), Positives = 361/584 (61%), Gaps = 3/584 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I+ ++ LR + Y+V + + D +YD + EL ELE K+ + + V Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 F +I+H MLSL+++F+ ++ L F+++V+ L NEK +CCELK+DGLA++ Sbjct: 69 AKNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAIN 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI--PARLEVRGEVFLPQAG 180 ++Y+NG+L SA+TRGDG GED+T N I++IP L N+ P ++E+RGEVF+ + Sbjct: 129 LIYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFPKKIEIRGEVFIKLST 188 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F KIN+ + K+F+N RN A+GSLRQ++P+IT R L+F+ YG+G + + Sbjct: 189 FNKINKMLKSKRKKLFSNARNMASGSLRQINPKITKNRSLSFYGYGIGYVNEKKYYYDQH 248 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L WG+P+ LC+S EV FY K + R L F+IDG+V+KVNS+ Q++L Sbjct: 249 DALKLINSWGIPIEKNTELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQKKL 308 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ PRWA+A+KF ++E+ T + V F VGRTG ITPVA+L+PV+ G ++ ++LHN Sbjct: 309 GCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSLHN 368 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I++LG+ I D V ++++GDVIP++ V+ +R + +E++FP C C S +E Sbjct: 369 KDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKRK-NVKEIIFPKTCIFCKSKIEFCLR 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + CTGG +C AQRK+ L HFVSR A+++ GMG+KII QL+EK+ + P+D+FKL Sbjct: 428 KKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSDIFKLNTD 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 K+ L+ MG KS++N++ + K+K T R +Y +GI VG T+ LA Y+ + Sbjct: 488 KIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYKNISNFIN 547 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 S E+L+ + +G ++ + F ++ N ++IS+LL + Sbjct: 548 TSYEDLRSIKGIGSFTSNCIKKFLKDKRNISIISDLLNVNLKIK 591 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 218/586 (37%), Positives = 365/586 (62%), Gaps = 3/586 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH---PELITPDS 57 M+ I Q+ +L+ +++H Y+YH +D+P I D YD L +L +LE + L Sbjct: 1 MKDIYNQILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIK 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 +VGA L F++ H++PMLSL ++ + F F+K++++ K+ +T+ C+ K D Sbjct: 61 LLDQVGAKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFD 120 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLAV++ Y+NG+L+SA+TRG+G+ GE+IT N+ I +IP K+ G NIP ++E+RGE+F+ Sbjct: 121 GLAVNLFYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMR 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 ++ F +N+ + +G K F+NPRNAAAGS+RQL+P I KR L FF YG G+ + + D Sbjct: 181 KSDFFILNQSCKLSGKKEFSNPRNAAAGSVRQLNPEIVKKRKLNFFVYGFGLFDYNKKID 240 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +H RLLQ KKWG P+ +C++ +EV+ FYH + R L F+IDG+VIK++S+ Q Sbjct: 241 SHYQRLLQIKKWGFPLYKNYCVCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQ 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG + + P+WA+A KF + ++ T + + F+VGRTG ITPVA P+++ GV +S A+ Sbjct: 301 NNLGCIEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N I+ L +R+ D V + RAGDVIP++ NV++ +R + T++++ PT+CP C + + Sbjct: 361 LYNIKTIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIF 420 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C C +Q + L +F S+ ++ G+G K I +L+ Y++TP D F L Sbjct: 421 SDDLKTCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSL 480 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T KL + RMG K ++ ++ + +K + +F+ +LGI VG + A LA Y+ ++E Sbjct: 481 TVKKLKNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGIFGVGTSIAKRLAYYYRSVEK 540 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 + + L K+ +G +++ + +F +SNR++I +L+ + Sbjct: 541 FFNTNYDTLSKIDHIGYNISNAIISFLKNKSNRSIILKLIRILNIF 586 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 213/681 (31%), Positives = 345/681 (50%), Gaps = 36/681 (5%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +L L Y+ ++P I DAEYDR+ EL ELE + I +SPTQ VG Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQ-TGFILSNSPTQTVGYT 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P++ +++H VP+LSLD + ++F K LKLDGL ++Y Sbjct: 70 PISELPKVKHPVPLLSLDKTKQVQDLISF----------AGKQPVLFMLKLDGLTTKLVY 119 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG LV A+TRGDG GE IT N+ +PL + RL + GE F+P FE++ Sbjct: 120 ENGTLVEASTRGDGEIGELITHNIPAYVDVPLSIP---YKGRLVIVGESFIPTHDFERLK 176 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV--GVLEGGELPDTHLGRL 243 E R G+ + N RN A+GS+R LDP A R L F + V G+ PD+ ++ Sbjct: 177 ETLRDGKGEPYKNGRNLASGSVRSLDPANCAGRCLHFMPFNVLEGLDSPFLFPDSRAMKI 236 Query: 244 LQFKKWGLPVSDRVTLCE--SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 +G + ++E V + ++ + IDG+V+ +SL + G Sbjct: 237 SSLFDYGFQPCPYIAANHPLTSELVNQYIERLTDLAGKKHLPIDGIVMIFDSLDYSKNCG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +AFKF + T +R++E+ R G I PV +PV + G VS ATLHN Sbjct: 297 RTGHHYKDGLAFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRATLHNL 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 I+ L L G ++ + + +IP + + D P CP CGS + + Sbjct: 357 TFIKELELVPGCRISVSKRNMIIPHIEENLERGHYVDAV----PPVCPCCGSQTRIYQRK 412 Query: 422 -------AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 C C +Q ++ HFV ++AM+++G+ + +++ + Y+ T D+ Sbjct: 413 GNDGRLIETVHCDNP-NCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYLQTFPDI 471 Query: 475 FKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L + + LE G KS + + N++ ++ TTF RFL ++ I VG + L F Sbjct: 472 YHLNEHQEEILQLEGFGKKSFERLWNSITSSRNTTFVRFLVSMDIPMVGRTKSRILDTVF 531 Query: 533 -GTLEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 G+L+ A+ + ++ D G + ++H++F++E+N + EL E + + + Sbjct: 532 HGSLQEFFDAASGDYDFTQLDDFGDTLNQNIHDWFSDENNLILWHELQKE-LIFEERKEM 590 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 N ++ F G T+V TG L+ +RD+ ++++ELGAK SV+KKTD +I GE AGSKL Sbjct: 591 NTMMKENVFTGCTIVATGKLAHFTRDEINSKILELGAKAGSSVTKKTDYLICGEKAGSKL 650 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 AKAQ LGI+++ E E L ++ Sbjct: 651 AKAQSLGIKILSEDEFLEMIA 671 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 211/682 (30%), Positives = 354/682 (51%), Gaps = 30/682 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +E ++ L+ ++ Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 2 IEDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTF 61 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR-VQDRLKNNEKVTWCCELKLDGL 119 R G+ L F +++H P+LSLD +D + + ++ V + + E K+DG Sbjct: 62 RFGSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGC 121 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NV+TIR +PL++ L +RGE+++ + Sbjct: 122 SIVLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRIDE---KIELVLRGEIYITKE 178 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN RT + N RN A+G LR++ + A PL F Y + +T Sbjct: 179 NFLKIN----RTLKNPYVNARNLASGILRRISSKEVANFPLDIFVYDILYSSLK--LNTS 232 Query: 240 LGRLLQFKKWGLPVSDRVTLCESA---EEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 + K++G V+ ++A K+E R + ++IDGVV+K++S Sbjct: 233 HDAFDKLKQFGFKVNPFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDSFIL 292 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++ LG + P+W++A+KF + M+ V D+ QVGR+G ITPVA +E V VAG ++NA Sbjct: 293 RKILGSTSHHPKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASITNA 352 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 +LHN D I+ +GL +GD VVI R GDVIP V V+ P++CP C + Sbjct: 353 SLHNQDYIDFVGLNVGDIVVISRRGDVIPAVDLVIEKLAVGS---FKIPSNCPSCKMTLI 409 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + A C C + E +K+F S++ M++ G+ +K I+ L EK+++ + +L+ Sbjct: 410 KE--GAHLFCVNRH-CSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVELYT 466 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL----AAYF 532 +L L+ K N+ ++E +K F + L +GI+++GE T L F Sbjct: 467 FNCDRLINLKGFNLKRINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNLNSF 526 Query: 533 GTLEAL---EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 T+ L + A++ +L K+ +G +A ++ F +++ + + G+ Sbjct: 527 DTISTLCKNKEAALAKLLKIKGIGERIALNIIEAFNDKTILDKFNFFKELGLKMEED-NT 585 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 N DS GK +TGS SRD +L + GA + SV+K D ++ GE G K+ Sbjct: 586 NDAVYDSFLFGKKFCITGSFKGYSRDVLIEKLTKKGAVFSRSVTKCLDFLLVGEKFGLKV 645 Query: 650 AKAQELGIE---VIDEAEMLRL 668 KA LGI+ + D + + L Sbjct: 646 QKANNLGIKTFSLFDIKDFVDL 667 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 215/707 (30%), Positives = 346/707 (48%), Gaps = 55/707 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I++++ L L+H +LY+ +DAPE+ D YD L EL ELE K+P L+ DS T+ Sbjct: 4 QQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSVTKI 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GA F + +H MLSLD + E +F + KN E + E K+DGL++ Sbjct: 64 IGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFTQY-KNLENFGFSLEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SI Y+NG + A TRGDGTTGED++ NV IR +P ++ LEVRGE+++ ++ + Sbjct: 123 SIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQISYLKP---LEVRGEIYMKKSTW 179 Query: 182 EKINEDARRTGGKV----------------------------FANPRNAAAGSLRQLDPR 213 + +NED + + F N RNAAAG+LRQ DP+ Sbjct: 180 KSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAGTLRQKDPK 239 Query: 214 ITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKV 273 I R L+ Y + L T + L K+ V++ L ++ +E++ ++ Sbjct: 240 IVKSRNLSSLFYEIVSPLEHNL-KTQMEVLAFLKEQNFEVNEFQKLAKNDQEIMFEINEF 298 Query: 274 EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGR 333 + + FD DG VIK N + + EQ+GF ++ P+WA+A+K+ +E T + ++ QVGR Sbjct: 299 SKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVAQVGR 358 Query: 334 TGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS 393 TG IT +A+ PV + V NATLHN + I++ + IGD++ I ++G++IP+V+++ Sbjct: 359 TGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVISIYKK 418 Query: 394 ERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDG 453 +CP C S +E EG C C ++ + L FVS+ +++ Sbjct: 419 NTD---SVFEKVLNCPSCNSLLEIPEGYVDQFCRN-ENCDEKKIQMLTFFVSKNCLNITN 474 Query: 454 MGDKIIDQLVEKEYV--HTPADLFKLTAG-------KLTGLERMGPKSAQNVVNALEKAK 504 + + I + D+F L K + K N++ ++EKAK Sbjct: 475 LSVQNIRIFYNHPVIQMREIQDIFLLKNHVDEIKKIKFFAGKSQENKKINNILQSIEKAK 534 Query: 505 ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 + L ALGI+ +G A L L L + E+L + G ++ F Sbjct: 535 DAYLRNVLAALGIKGIGNIAANLLTNKITKLSDLNNLTDEDLLSIDTFGEKSIENLKEFL 594 Query: 565 AEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL 624 + E N+++I L + + + S +TGSLS +SRD+ K +++ Sbjct: 595 SSEKNQDLIKFLDENLNYLNS-------KKSSKLNNLNFAITGSLS-ISRDEFKKIILDN 646 Query: 625 GAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAEMLRLLG 670 G + SVSK T +I+ S K+ KA E I+VI E E LL Sbjct: 647 GGIFSNSVSKNTSYLISNSKENSTKIKKALENNIKVITEEEFHNLLK 693 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 207/672 (30%), Positives = 352/672 (52%), Gaps = 25/672 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ + L + Y Y+ ++ P + D EYD+ + EL +LE +HP+LI +SPT R Sbjct: 4 EEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSPTFR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G+ F++ ++ PMLSL ++ + +F + + E + + E K+DGL++ Sbjct: 64 IGSFASEKFTKFVYQKPMLSLAKAYNYDDINSFINNISKIVPT-ENINFNIEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y+ G LV AATRGDG+ GED+T N+ I++IP ++ N LEVRGEVF+ + F Sbjct: 123 ALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLINYFN---DLEVRGEVFITKNDF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +KINE + AA+G+LRQLD I A+R L+ F Y + E + H Sbjct: 180 KKINESNNFANARN------AASGTLRQLDANIVAERNLSAFLYEIVEPEKHGIYYQH-E 232 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K P + + E E + E + L +D DG+VIK+N L ++LG Sbjct: 233 ALEFMKNLDFPTNPFSKVVEIEELEESISD-FAEIKNKLDYDADGLVIKLNDLQMWDKLG 291 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 ++ P+ ++AFK+ + + + D+ VGRTG IT +A + PV + V ATLHN Sbjct: 292 KTSKFPKHSIAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLHNH 351 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I+ + + I D+V I +AG++IP+V+++ + D T+CP CGS + EG Sbjct: 352 NFIKDMNININDEVNIIKAGEIIPKVISLKEEKNYVDY--YKKATNCPSCGSQLVEFEGI 409 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA-- 479 CT C + ++ HF SR +++ G+G + +++ D+F L Sbjct: 410 VDQFCTNDE-CPDKNINNIYHFASRNCLNIVGLGLSTVKDFY-PKFIKNIKDIFDLHKYR 467 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL-EAL 538 +L L R N++N++E AK F++ ++ALGI+ +G+ A +A + E L Sbjct: 468 AELIKLPRYRDLKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAELL 527 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 + ++ +LQ ++G + + F + +N+++++ L A A+ I + Sbjct: 528 DDHNLLKLQNTKNIGPKIIESLIEFISSPANQDLLAFLDAI-----FNYEGKAKVISTIL 582 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +G T V+TG LS+ R + E V+ ++S KT ++AG AGSKL KA + G + Sbjct: 583 SGYTFVITGVLSE-PRSHFVKLIEEHSGNVSSAISSKTSYLLAGSDAGSKLEKAYKTGTK 641 Query: 659 VIDEAEMLRLLG 670 VI+E + L+ Sbjct: 642 VINEEQFYDLIK 653 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 229/681 (33%), Positives = 314/681 (46%), Gaps = 28/681 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + LR Y+ + DA YDRL L ET+HP + P SPT V Sbjct: 25 RSEYEAALRRLREASQAYYGDGDSVMDDASYDRLRLALLAWETEHPAEVAPGSPTTLVAD 84 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A + H +LSLDNVFD E +A+ V+ RL + E K+DG AV+ Sbjct: 85 GAAPA-GDVAHTTRLLSLDNVFDAEGLVAWGASVERRLGRAPAGGFTVEPKIDGAAVAAR 143 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV TRGDG+ GEDI+ + I +P L GE A +EVRGEV Q FE Sbjct: 144 YRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELLAGE---ATVEVRGEVAFTQEQFEVA 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---DTHLG 241 N G VFANPRN AG+LR D + +TF+ YG LEG T Sbjct: 201 NAVRVAHGAPVFANPRNGTAGTLRAKDRPY--RLRMTFWAYGAVELEGVPFLPAGATQAE 258 Query: 242 RLLQFKKWGLPVSDRV----TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L G+ + + + + R L IDGVVIK+N A+Q Sbjct: 259 ALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAMAAMRAELPVGIDGVVIKLNDTAEQ 318 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E +G R P WA+A K PA E+ T + DV ++VGRTG + P A L PV + G V+ AT Sbjct: 319 EAIGSGTRFPYWAIAVKLPAVERQTVLEDVVWEVGRTGVLAPTAVLAPVEIDGSTVTRAT 378 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN +I R L IGD V + +AGD+IP+V V RP + V P CP CG ++ Sbjct: 379 LHNPADIRRRDLHIGDTVTVYKAGDIIPRVQAAVALLRPAGAKPVPLPETCPRCGGEINT 438 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + RC G C +++ R +D+DG+G + LV+ V ADLF L Sbjct: 439 AQER--WRCAKGTSCA--LPALIEYAAGREMLDIDGLGKTYVAALVDSGDVTDVADLFTL 494 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T +LT + A + +E AK +R ALG+ G + + +A +F T+EA Sbjct: 495 TLEQLTAASGSS-RRAAKLAEQIEAAKARPLSRVFCALGVLGTGRSMSRRIARHFVTMEA 553 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A E+Q V +G A + A + VI +L+A GV P P Sbjct: 554 IRRADAAEMQDVEGIGPEKAPVIVEQVAALA--PVIDKLIAAGVTLHEPEASATASAGGP 611 Query: 598 FAGKTVVLTGS----LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE----AAGSKL 649 GK VV+TG L R + A + + G + VS +T +++ SK Sbjct: 612 LDGKVVVVTGKMAGPLEGFGRTEMNALIEKAGGRAGSGVSARTSVLVCAPSASGKPSSKA 671 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA ELG+EV+ L+ Sbjct: 672 VKAAELGVEVLTPEAFAELVA 692 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 269/795 (33%), Positives = 369/795 (46%), Gaps = 133/795 (16%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L + + YH P DA YD L LE HP +I DSP VGA P Sbjct: 86 MASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALHPAMIREDSPIGAVGAKPA 145 Query: 68 A--AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--------KVTWCCELKLD 117 A A Q+ H VPM SL N FD++ AF RV L E + +C E K+D Sbjct: 146 AWSALPQVEHAVPMRSLGNCFDDDDVRAFVARVTRALGPPERFDDDARAPLRFCAEPKID 205 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVF 175 G + S+ Y +GVLV AA+RGDG GED+T + I P L G + PA LE+RGEVF Sbjct: 206 GASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTLTGRAGDWPATLEIRGEVF 265 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPR----ITAKRPLTFFCYGVGVLE 231 + F +N G F + RNAAAG++R+L+P A R L F YG G ++ Sbjct: 266 IADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDGADAGRYLRFLAYGWGEVK 325 Query: 232 GGELP---DTHLGRLLQFKKWGL-PVSDRVTLCESAEEVLA-FYHKVEEDRPTLGFDIDG 286 + L GL PV + + ++A + +E DR +LG+ +DG Sbjct: 326 PQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAGSHAALERDRASLGYRVDG 385 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE-P 345 VV KV+ +A Q LG +RAPRWA A KF A+ +T +R V+ QVGRTGA+TPVA L+ P Sbjct: 386 VVYKVDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVDVQVGRTGALTPVATLDPP 445 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V + G V+ ATLHN +++ R GLR+G +VV+ RAGDVIP+VV VV E V P Sbjct: 446 VALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRVVRVVAEGEEEGAV-VATP 504 Query: 406 THCPVCGSDVERV--------------------------------EGE------------ 421 T CP CGS V + E E Sbjct: 505 TRCPACGSAVSKTPLAASVKCPKKRLSSPYESGDAASSSFAAVDDESEDATSSPSSSSSS 564 Query: 422 -AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 AV RCTGG C AQ E + HF SR A+DV G+ K I L++ + +PADLF + A Sbjct: 565 AAVLRCTGGWRCPAQALERVAHFASRDALDVRGLARKQIADLLDAGVIASPADLFTMRAR 624 Query: 480 -------------------------------GKLTGLERMGPKSAQNVVNAL-EKAKETT 507 E +SA+ + +AL E A Sbjct: 625 FEHLGVDPDASGEDDDARGDGGGVAVPEFWTYASGKDEGKLKRSAKKLFDALDETAAGVP 684 Query: 508 FARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE-------------------ELQK 548 RF+Y+LGI +VG TA L+ + TL+A A+ E + Sbjct: 685 LHRFIYSLGIPQVGLTTAKLLSRKYRTLDAFRDAAEEAAAAKAAASADAAASTEAPAMTD 744 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAEGV------------HWPAPIVINAEEIDS 596 + +G VVA+ + F++E +N NV+ ++L GV A Sbjct: 745 IDGIGPVVAATIGEFWSERANVNVVDDMLRNGVVVSDDASPPDASDASDASNAAAASATG 804 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQEL 655 P G VV+TG++ M+R++A + G +VS KT +++ GE AG K A+ Sbjct: 805 PLTGYAVVVTGAVPGMTREEAFDAVAAAGGSPQKAVSGKTHVLVVGEGAGRRKAEAAEAR 864 Query: 656 GIEVIDEAEMLRLLG 670 G+ VID LR+L Sbjct: 865 GVAVIDAEAFLRVLA 879 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 211/680 (31%), Positives = 323/680 (47%), Gaps = 40/680 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+++ +++ EL T++ + Y+ DAP + D +YDRL EL LE + I SPTQ Sbjct: 1 MQNL-ERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERE-TGTILSSSPTQ 58 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RV L + + +RH PMLS D + L +E KLDGL Sbjct: 59 RVSGEVLESLTAVRHSRPMLSADKCKSVAD-------IHKYLGGHEA---VLSWKLDGLT 108 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + YENG LV A TRGDG GED+T VR ++ +PL + + LEVRGE + Sbjct: 109 LVLRYENGKLVQAITRGDGLQGEDVTHTVRIMKNVPLVIPCKEP---LEVRGEGVISWKE 165 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F +N +A+PRN AAGS+R+L+ +R L+F + + + T Sbjct: 166 FHALNGTLDE----PYAHPRNLAAGSVRKLNAEEVRERGLSFMAFDL--ISDNLGGSTKW 219 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEE--VLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L + G L A E V + + DG++ + N LA Sbjct: 220 ETLRFLAQMGFTTVGYSILAAGASEEAVRQAMDFYQPK--EYAYPTDGLIFEFNDLAYGR 277 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG AFK+P T R +E RTG I+ A + V + G V++A L Sbjct: 278 SLGATGHHENRMTAFKWPDTRYETKFRRLEVATTRTGMISLTAAFDDVVIDGTTVNHAYL 337 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D RL L GD + + +A +IPQ+ +E + P CP CGS + Sbjct: 338 HNLDNFTRLALGPGDTISVYKANMIIPQI-----AENKTKSGGCPLPDVCPCCGSTLVVR 392 Query: 419 E---GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + G C C A+ HF S+ M++ G+ ++ + V+ +V DL+ Sbjct: 393 QSSGGTRQLYCEN-EACPARLVRKFVHFCSKTRMEIKGLDEQTLTTFVQHGWVKNYGDLY 451 Query: 476 KL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF- 532 +L ++ G KS + NA+++ + T +F+ ALGI EVG L F Sbjct: 452 ELERHKEEILKTPGFGEKSFARLQNAVDERRTCTLNQFIAALGIPEVGRHAGRILNRKFG 511 Query: 533 GTLEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 G+ +A E A ++ + ++ D G V+ +++ ++++E + L + + Sbjct: 512 GSWDAFERAILDQFDFTQLEDFGQVMNDNIYCWYSDEEEAKLWRPALNH-ITFLKEETTM 570 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 E ++PFAGKTVV TG L +RD + +L+ LGA+ A SVSKKTD +I GE AGSKL Sbjct: 571 PEAQNNPFAGKTVVATGKLENYTRDGIQMKLLSLGARPASSVSKKTDYLIVGENAGSKLT 630 Query: 651 KAQELGIEVIDEAEMLRLLG 670 KAQ LG+ + E + L++L Sbjct: 631 KAQTLGVTTLTEQQFLQMLA 650 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 257/749 (34%), Positives = 367/749 (48%), Gaps = 97/749 (12%) Query: 18 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP--LAAFSQIRH 75 H+ Y+ P I D+EYD + + HP RVGA P + +I H Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYDAIAAAHPTAAKAGGARARVGATPDGASGLEKIAH 61 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-------VTWCCELKLDGLAVSILYENG 128 VPM SL N FD AF KRV+ E + +C E K+DG + S+ YENG Sbjct: 62 AVPMRSLGNAFDVGQVEAFMKRVEKLRGETEGEAATTTAIEYCAEPKVDGASASLRYENG 121 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 LV A +RGDG GED+T ++ R +P+KL E PA LE+RGEV + F+++N + Sbjct: 122 ELVYAVSRGDGEMGEDVTRHLIGARGVPMKLA-EPYPAVLEIRGEVHVADEDFQRVNAER 180 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL-----EGGELPDTHLGRL 243 TG +VF N RNAAAG++R L + PL F YG G + E T L Sbjct: 181 AATGLRVFKNARNAAAGAMRTL-VVDDNQMPLRFLAYGWGAVGASNEETNAPWRTQSEFL 239 Query: 244 -LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 G + + ++ E++ Y +E RPT+ ++IDGVV KVNS+ Q LG Sbjct: 240 SAFLPAQGFDAVPFLGVAKTIGELIEAYDALEIARPTMPYEIDGVVYKVNSVELQTALGA 299 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 AR PRWA+A KF A +T +R +E QVGRTGA+TPVA L+PV + G +S ATLHN D Sbjct: 300 DARQPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALTPVALLDPVDIGGASISRATLHNFD 359 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT---------REVVFPTHCPVCGS 413 EI R L++G +V + RAGDVIP+VV++ + E + E + P+ CP CGS Sbjct: 360 EIARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEASAYAEDIKPLPEWLPPSKCPDCGS 419 Query: 414 DVERVEGEA-------VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 V R A + RCTGGL C +Q E L HF +R A+D+ G+ ++ L + Sbjct: 420 SVVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLHFCARDALDIRGLARGTLETLHREG 479 Query: 467 YVHTPADLFKLTA-------GKLTGLERMG----------------PKSAQNVVNALEKA 503 V TPAD+F L + R +SA + A+E Sbjct: 480 VVKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSKGEIKHGSDGLKQSAVKLFQAIEVR 539 Query: 504 KE-TTFARFLYALGIREVGEATAAGLAAYFGTLEAL------------EAASIEELQKVP 550 ++ RF+YALGI +G TA LA ++G+L A + + L V Sbjct: 540 RQGVPLHRFIYALGIPNIGAHTAKVLATHYGSLAAFKKAALAAAKGGPASLAHAALTHVD 599 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP------------- 597 VG V+A + +F+ E N ++ E++A GV +++ SP Sbjct: 600 GVGPVLAQSLVDFWGEPGNAFIVDEIIATGVVVLDADASSSKNQPSPRFAEPASSSSVSP 659 Query: 598 --------------FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 G ++ TG++ SRDD + G VA ++S+KT LV+AG Sbjct: 660 TPSPTVPSPEPTADLRGMKILFTGTIDGFSRDDVHDLIRAAGGDVASTLSRKTALVVAGV 719 Query: 644 AAG-SKLAKAQELGIEVIDEAEMLRLLGS 671 AG SKLAKA++L + ++D + + L S Sbjct: 720 GAGPSKLAKARDLAVPIVDASRFVSALTS 748 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 210/679 (30%), Positives = 346/679 (50%), Gaps = 35/679 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q + + L Y+ + + + EYD+L EL ELE + ++ +SP+ Sbjct: 1 MADKIQLMKDKIEILDRAAKAYYQENTEIMSNIEYDKLYDELLELEKE-TGVVLSNSPSI 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG L+ + RHE PMLSLD D + + L + + KLDGL Sbjct: 60 HVGYELLSNLPKERHEKPMLSLDKTKDVGTLKEW-------LGTQKGI---LSWKLDGLT 109 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + Y++G LV A TRG G GE IT+N R R +P+ + L +RGE + + Sbjct: 110 IVLTYQDGHLVKAVTRGTGEEGEVITNNARVFRNLPVTI---AYKGTLILRGEAIIRYSD 166 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F KIN + G K + NPRN +GS+RQL+ ++T++R + FF + + + EL ++ Sbjct: 167 FIKINNEIADVGVK-YKNPRNLCSGSVRQLNNKVTSERNVYFFGFSLVKADNVELDNSRA 225 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ K G + D + S + ++ F DG+V+ +A E L Sbjct: 226 SQMNWLKNQGFDIVDFKEVTSS--NIEETVQWFSQNIEANDFPSDGLVLTFEDIAYGESL 283 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A+ PR ++AFK+ + + T + ++E+ RTG I P+A EPV + G VS A++HN Sbjct: 284 GSTAKFPRDSIAFKWRDEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTTVSRASIHN 343 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC--GSDVERV 418 +E L L IGD + + +A +IPQ+ SE + P CPVC +++++ Sbjct: 344 ISIMEGLELGIGDTIGVYKANMIIPQI-----SENLTRSGMAPIPEECPVCKGKTEIKQE 398 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 G C C A++ +S HFV R AM+++G+ + +++L+ K + ADLF + Sbjct: 399 NGVKTLYCVNNE-CLAKQIKSFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELADLFHIE 457 Query: 479 AGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG-TL 535 K + LE +G KS ++ ++ KA++TT R LY+LGI VG + A + YF Sbjct: 458 KYKNEILELEGLGEKSFNKLITSINKARKTTAVRLLYSLGIPNVGLSNAKLICRYFKYDW 517 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +E A EL ++ +G ++A FF++E + ++ ++L E + + +E+I Sbjct: 518 NKIENAEFSELIQIGGIGDIMAESFIRFFSDEKKKVIVQDVLNE-LELEEVQLSQSEQI- 575 Query: 596 SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGEA--AGSKLAKA 652 F V+TGS+ Q +RD+ K + E G KV G+V+ KT+ +I + SK KA Sbjct: 576 --FENLNFVITGSVEQFKNRDELKDVIEEKGGKVTGAVTSKTNYLINNDNMSNSSKNKKA 633 Query: 653 QELGIEVIDEAEMLRLLGS 671 +EL I +I EA+ L L + Sbjct: 634 KELNISIITEAQFLEWLNN 652 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 623 bits (1606), Expect = e-177, Method: Composition-based stats. Identities = 228/682 (33%), Positives = 336/682 (49%), Gaps = 33/682 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + E+++ +L + Y+ +P + DAEYD ELR L +PEL +P +V Sbjct: 10 NAEERIRDLADRVVSLRDAYYR-GSPLVADAEYDATEDELRSLIAANPELTPDPNPLDQV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + +RH PMLSL+ E AF R KLDGL++S Sbjct: 69 GA-PAVLHAPVRHARPMLSLEKATQPEQVAAFLDRF-------PGQPVVVMPKLDGLSLS 120 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIR-AIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE G L+ A TRGDGTTG+D+T VR + +P ++ P R+EVRGE + ++ F Sbjct: 121 LVYEGGALLRAVTRGDGTTGDDVTPLVRALADGVPTRVPA---PGRVEVRGEAVMLRSTF 177 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 NE K NPRNAAAG+LR DP A R L F + + + Sbjct: 178 TAYNE---AHPDKPLINPRNAAAGTLRAKDPATVAGRRLRFLAFELDT-DAEAGAGVGAD 233 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + G + AE +E R L +D+DG V+++ G Sbjct: 234 LEEGLRALGF-TPADMRHAADAEAAQRVITGIETGRADLDYDLDGAVLRLADRRAYAAAG 292 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR A+AFKF A+E+ T + DV + VG+TG + PVA LEPV V G V+ ATL N Sbjct: 293 TRSNSPRGALAFKFAAEEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQ 352 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEG 420 + I+ G+ +GD V++RRAGDVIP V V+ ++R + RE+V P+ CP C + Sbjct: 353 EVIKARGVMVGDTVLVRRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGN 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 CT + C AQ L H+ SR A D+D +G I++ E + P+D + LT Sbjct: 413 SRELFCTN-VSCAAQTVRRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEALE 539 +L ER+G SA ++ ++ ++ R L + E TA L FG+LE + Sbjct: 472 QLLEFERVGETSATRMIESIAASRAVGLRRALIGFAVPMASEGTATRLCRAGFGSLEEVA 531 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP--APIVINAEEIDSP 597 A E L +V D+G VA+ + A R ++ L GV + D+P Sbjct: 532 DAGEERLVEVEDIGPKVAASLTEHLARL--RPELTRLRQRGVSLDVRDEDLPPVVASDAP 589 Query: 598 FAGKTVVLTGSLSQMS------RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLA 650 AGKTVV+TG++S R + + GA A SVS TD++I G G K A Sbjct: 590 LAGKTVVITGAISDPRSGEKVARPAFQRLCEKAGATTASSVSANTDMLITGAEVGAGKTA 649 Query: 651 KAQELGIEVIDEAE-MLRLLGS 671 KA++LG+ V+D+ E +L+ + Sbjct: 650 KAEKLGVAVVDQGEIWAQLIAA 671 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 213/682 (31%), Positives = 341/682 (50%), Gaps = 40/682 (5%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ EL + L Y+ + + EYD+ L LE + ++ SP+Q Sbjct: 39 QDSIARMKELISFLNEAAKAYYQEGREIVSNLEYDKAYDTLLSLEKE-SGVVLSGSPSQN 97 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A A + HE PMLSLD E +F L+ E + KLDGL + Sbjct: 98 VGYAVATALPKEAHETPMLSLDKTKSVEDLQSF-------LQGQEGI---LSWKLDGLTI 147 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+ G L+ A TRG+G GE +T N +T + +PL++ L VRGE F+ + F Sbjct: 148 VLHYQEGKLLKAVTRGNGIIGELVTENAKTFQNLPLQIP---FKGHLVVRGEAFISYSDF 204 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE----GGELPD 237 E+INE+ G K + NPRN +GS+RQLDP++T +R + + + + E + + Sbjct: 205 ERINEELPEEGAK-YKNPRNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHN 263 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H +K G V +AE + + + P F DG+V+ N +A Sbjct: 264 QHEEEFRFLEKQGFSVVH--RKMVNAENIQEAVAEFSKLMPKNDFPSDGLVLLYNDIAYG 321 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG A+ PR A+AFK+ +E+ T + VE+ RTG I PVA PV + G +VS A+ Sbjct: 322 ESLGRTAKFPRNAIAFKWQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTVVSRAS 381 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG--SDV 415 LHN E L L IGD++ + +A +IPQ+ E + + P HCP C + + Sbjct: 382 LHNITYCEDLALGIGDEITVYKANMIIPQI-----GENKTKSGNLEIPKHCPACQGETKI 436 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + + + CT C A+R + FVSR A++++G+ + +++ + + ++ DLF Sbjct: 437 VKDKETKMLYCTNPH-CPAKRIKQFALFVSRDALNIEGLSEMTLEKWLGRGFIQEFPDLF 495 Query: 476 KLTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L ++ G+E G KS + + +EKAK + R LY LGI +G + LA F Sbjct: 496 SLEKYREEIIGMEGFGLKSFEKIQENIEKAKTSNLGRLLYGLGIEGIGVSNGRMLAEAFS 555 Query: 534 -TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 L A+ EE+ +V +G V+A + +F +E NR ++ ELL+ + + Sbjct: 556 QDPYKLMDATKEEILQVKGIGQVLADSIAEYFQKEENRRIVLELLSI-----LHLEKEEK 610 Query: 593 EIDSPFAGKTVVLTGSLSQMS-RDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKL 649 E S +GK V+TG++ R + + + G + + SVS+ TD +I + + SK Sbjct: 611 EEKSGISGKHFVITGAVHHFPNRKALEEEIRKAGGQSSSSVSQNTDYLINNDSTSGSSKN 670 Query: 650 AKAQELGIEVIDEAEMLRLLGS 671 KA+ELGI +I E E L+LL + Sbjct: 671 KKAKELGIPIITEEEFLKLLEA 692 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 230/710 (32%), Positives = 360/710 (50%), Gaps = 79/710 (11%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 + L + ++ H LY+ PEI DA++D L++ LRE++ +P+L ++VGA P Sbjct: 10 EADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL-------EKVGADP 62 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ H PMLSLD + F + + + + KLDG A+S+ Y Sbjct: 63 APGSVKVEHIYPMLSLDKANTPQEIAHFVN-----ITSAATQRFVVQPKLDGSAISLEYR 117 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G+LV A TRG GT GED+T NVR I IP ++ VRGEV + + + Sbjct: 118 RGMLVRAVTRGSGTRGEDVTRNVRRIPNIPNRIKWR---GNCFVRGEVVM-------LLD 167 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKR--PLTFFCYGVGVLEGGELPDT------ 238 R +V NPRN AAG+LRQ +P R L FF Y V EG ++ Sbjct: 168 TYRENYAEVAPNPRNLAAGALRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNY 227 Query: 239 --HLGRLLQFKKWGL-PVSDRVTLCESAEEVLAF-YHKVEED---RPTLGFDIDGVVIKV 291 L + P V + ++EV+ K EE R + ++IDG+VIKV Sbjct: 228 IHDSQILEWLFTMDIQPAGRFVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKV 287 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + L ++ LG A PRWA+A+KFP +E T V V++Q GRTG +TPVAR+ PV V+GV Sbjct: 288 DELTKRPLLGETAHHPRWALAWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGV 347 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--------ERPEDTREVV 403 V N TLHN E+ERLGL+IGD+V+I R GDVIP++ V+ R D Sbjct: 348 TVENTTLHNPGEVERLGLKIGDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFH 407 Query: 404 ----------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDG 453 P+ CP CG+++ A +C C ++ S+ ++ +++++DG Sbjct: 408 EALPERIDVEPPSVCPRCGTNLHSE--GAFLKCRNS-GCPSRVVRSILYWC--KSLEIDG 462 Query: 454 MGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLY 513 +G+K+ +QLVE ADL++L+ + LERMG KSA+ V++ ++ ++ + F+ Sbjct: 463 VGEKLANQLVESGLAPELADLYRLSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIA 522 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAA------SIEE-------LQKVPDVGIVVASHV 560 +LG+ +G A+ ++ T+E EE L + +G +VA Sbjct: 523 SLGLPRIGPEIASMISKEIKTIENFRNLVNTWSSGREETTDILPRLVAIDGIGEIVARLF 582 Query: 561 HNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKAR 620 + +SN + I +L + + P AG T+ +TGS+++ R + + Sbjct: 583 LD--GSKSNWSQIEDLSSL---LEITPMQTENRSIGPLAGLTLCITGSMTR-PRKEVELL 636 Query: 621 LVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + G KV SVS + D +IAG+AAGSKL KA L + V++E ++++ +G Sbjct: 637 IRSAGGKVVSSVSSRLDYLIAGDAAGSKLEKATRLQVSVLNEEQLMQKIG 686 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 246/714 (34%), Positives = 352/714 (49%), Gaps = 85/714 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ EL L HH LY+ AP I DAEYD L EL+ L+ HP+L RVG+ Sbjct: 13 ARIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQL-------DRVGSD 65 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P ++ H PM SLD + F + + C+ KLDG A+S+ Y Sbjct: 66 PAPGSVKVEHLFPMQSLDKASEVAEISHFVAQT-----TAHGRRFVCQPKLDGSALSLEY 120 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 G LV AATRG+G GED+T+N R I IP L + +RGEV +P F Sbjct: 121 RRGRLVRAATRGNGERGEDVTANARRIPNIPESLGWD---GDCHIRGEVVMPLETFRSKY 177 Query: 186 EDARRTGGKVFA-NPRNAAAGSLRQLDPRIT--AKRPLTFFCYGV-------GVLEGGEL 235 FA NPRN AAGSLRQ + L+F YGV + Sbjct: 178 AS--------FAPNPRNLAAGSLRQKHVKAGKGDAADLSFHAYGVMFPGLDHKHPDSPAP 229 Query: 236 PDTH--LGRLLQFKKWGLPVSDRVTLCESAEE--------------VLAFYHKVEEDRPT 279 PD + + + G+ + + +E +L R T Sbjct: 230 PDFNHDSQAIDWLTQNGIAAAGNEVVEAGVDEGIEEAEADEAVAEALLQVTENWARKRDT 289 Query: 280 LGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITP 339 +++DGVVIK++ ++E LG A PRWA+A+KFP +E T + V++Q GRTG +TP Sbjct: 290 ADWELDGVVIKLDEFRKRELLGKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTVTP 349 Query: 340 VARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED- 398 VAR+ PV V+GV V N TLHNA EIERLG+ +GD+V I R GDVIP++V V+ D Sbjct: 350 VARVAPVRVSGVTVENTTLHNAGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSADL 409 Query: 399 -----------------TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLK 441 R V P +CP C S ++ E A RC L C ++ + S+ Sbjct: 410 DNRFHADGTPFADPLPLRRGVKIPANCPRCRSGLQ--EDGAFIRCFN-LECPSRLERSIL 466 Query: 442 HFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALE 501 ++ RA+++DG+G+K+ +QL E V T DL++L+ L GLERM KSA NV+ L+ Sbjct: 467 YWC--RALEMDGIGEKLAEQLCEAGLVKTLPDLYRLSGKDLEGLERMAEKSAANVIAQLD 524 Query: 502 KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE------AASIEELQKVPDVGIV 555 +K A FL ALG+ +G A G A G+ A+ A++E L ++ VG Sbjct: 525 DSKTLDLAAFLAALGLPGIGPELAGGFAQEIGSSTAMFELLADSEAAVERLIRIEGVGET 584 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRD 615 VA + E R ++ +L+ + A E G+T +TG+L++ R Sbjct: 585 VAGSFLSGL--EMRREMVEDLVDVLTITD----VEAVEKSGSLTGQTFCITGTLTR-PRK 637 Query: 616 DAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + + G KV +VS K D ++AGE+AG KL KA L + V+ EAE+L ++ Sbjct: 638 EVALMIKAAGGKVVSAVSGKLDHLVAGESAGLKLDKANRLSVNVLSEAEVLSMI 691 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 204/457 (44%), Positives = 287/457 (62%), Gaps = 3/457 (0%) Query: 25 MDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDN 84 D I D E+D+L+ EL +LET+ P+L+ PDSP+QRVG F + H MLSL N Sbjct: 2 EDQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVGGTITKEFETVVHAYKMLSLGN 61 Query: 85 VFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGED 144 + +E +AF++RVQ L N + CE+K DG+A+S++YENG LV A TRGDGT G+D Sbjct: 62 TYSKEELIAFDERVQKGLGGNPY-EYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDD 120 Query: 145 ITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAA 204 +T+NVRTIR IPL + G+ IP R EVRGE+FLP FEKIN + G + ANPRNAA+ Sbjct: 121 VTANVRTIRNIPLYVKGDKIPERFEVRGEIFLPHREFEKINAERNENGEALMANPRNAAS 180 Query: 205 GSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAE 264 G+L+ D + AKR L + Y + L + H + + WG VS + E Sbjct: 181 GTLKMQDSSVVAKRRLNCYFYQL--LGEDIGVNAHDEAISLIESWGFNVSPTYRKTNTIE 238 Query: 265 EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFV 324 +VL + E R TL D DGVV+K+N Q+E+LGF A+ PRWA+A+K+ A+ T + Sbjct: 239 DVLTYIEDWREKRFTLPLDTDGVVLKINDYEQREELGFTAKNPRWAIAYKYKAESSETEL 298 Query: 325 RDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVI 384 V +QVGRTGAITPVA L PV +AG V A+LHNA+EIERLGL GD V + + G++I Sbjct: 299 LSVTYQVGRTGAITPVANLAPVSLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEII 358 Query: 385 PQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV 444 P++ V L +R D++ + + + CP CG+ +ER EGEA C C Q ++HFV Sbjct: 359 PKITGVSLEQRKPDSKPIEYISECPECGTPLERKEGEAKHFCPNASNCPPQVLGRIEHFV 418 Query: 445 SRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 +RAMD+D +G + I L+++ ++ PAD++ L + + Sbjct: 419 HKRAMDIDSLGTERIRALIDQGFIQNPADIYDLESKQ 455 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 456 DKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS---------AQNVVNALEKAKET 506 + I++ VH L L L K N++ + +K+ Sbjct: 569 EAILEASKRHGTVHRI--LLDLDLELSQELRERIKKLKANTFQEGVISNMMEGIAASKKQ 626 Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 F + L+ALG+R +GE TAA LA +FG+++ L AS EEL ++ VG + +H FF+ Sbjct: 627 PFEKVLFALGVRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGETLVQSIHEFFSR 686 Query: 567 ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGA 626 + N ++IS L G+ + A I + + GK ++ +G L+Q RD+ + G Sbjct: 687 QENLDIISRLKKSGLQFDAEQ-IETVSLGNALEGKKILASGKLNQFKRDEIVDFIKSHGG 745 Query: 627 KVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 + SVSKK D +I GE G SK KAQ+LGI +I E + L++L Sbjct: 746 QYVSSVSKKLDFIIEGEDMGPSKKEKAQKLGIPLISEEDFLKML 789 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 198/625 (31%), Positives = 326/625 (52%), Gaps = 49/625 (7%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +++++ L + Y+ + + D EYD L EL++ E +SP+ V Sbjct: 7 DLDRRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHA-KGFSDRNSPSLTV 65 Query: 63 G-AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G AA L F ++H PMLSLDNVF + ++ ++ + ++ T+ CELK+DG+ V Sbjct: 66 GIAAQLNLFEPVKHIEPMLSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGV 125 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y NG L+SAATRGDG GEDIT N+ + +IP ++ +P E+RGE F+ + F Sbjct: 126 SLRYANGYLISAATRGDGAIGEDITQNMLYVPSIPPRI---ALPGIFEIRGEAFIKRDEF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-------- 233 ++IN+ + K FANPRN +G +R P + ++F+ +G + G Sbjct: 183 DRINQLSLERS-KQFANPRNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLH 241 Query: 234 -----------ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 E+ + + +PV+ LC + E+ ++ + +R + + Sbjct: 242 SDITASGGVKTEIEHGMFSAYSRLSECKIPVNSYNRLCTNFSEIESYIENIRLNRQCVPY 301 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 IDG+V+K++SL +Q LG +APRWAVA+KFP++ +T + D+E VGRTG +TP A Sbjct: 302 AIDGIVVKIDSLQKQALLGSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAV 361 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 L+P+ + G VS ATLHN I L IGD V IR+AGD++P+V+ + +R Sbjct: 362 LQPIQLDGSEVSRATLHNQKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKRDGSEVLF 421 Query: 403 VFPTHCPVCGSDVERVE-GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQ 461 P+ CP CG+++ + G+ RC C Q L++ SR +D+ + ++ Sbjct: 422 KMPSLCPSCGAELMPSKLGDIDLRCPNMQSCLVQLAGRLEYIGSRGVLDIAYLAEENAYA 481 Query: 462 LVEKEYVHTPAD--LFKLTAGKLTGL------------ERMGP---------KSAQNVVN 498 L A+ LFK+T L L + G KSAQ++V+ Sbjct: 482 LSHLRKFGKSAEVQLFKITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQDMVD 541 Query: 499 ALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVAS 558 ++E+AK + +FL AL IR +G A+A LA +FG++E++ A I+EL KV +G +A Sbjct: 542 SIERAKRSPLWKFLLALNIRHIGPASAKALADHFGSIESIINAKIDELLKVRSLGETIAI 601 Query: 559 HVHNFFAEESNRNVISELLAEGVHW 583 VH++F + +++ ++G + Sbjct: 602 SVHDWFRDPWRVELVNTWRSDGALF 626 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 214/466 (45%), Positives = 282/466 (60%), Gaps = 4/466 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L T + + Y+ +DAP DAEYD L EL++LE K P L+TPDSPTQ V Sbjct: 32 EATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQTV 91 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G + + F+ + H +PMLSLD+VF E+ + R L N+ V E+K+DGLAVS Sbjct: 92 GGSAVNTFAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQ-VEILAEVKVDGLAVS 150 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ILYENG+L AATRGDG GED+T+NV TI +P +L G + PA +EVRGE++ P A F Sbjct: 151 ILYENGLLTRAATRGDGRVGEDVTANVLTISNVPRQLTG-DFPASVEVRGEIYFPIADFL 209 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE-LPDTHLG 241 NE G K F N RNAAAGSLRQ DP TAKRPL C+G+G+ EGG+ PD+ Sbjct: 210 DFNEQRALRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIYEGGQSQPDSQHA 269 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 Q K WGLPVS+ L + E+ + R L +IDG+V KV+S Q LG Sbjct: 270 WYEQLKAWGLPVSEYTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKVDSRQYQAALG 329 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +RAPRWA A+KFP E T + D+ QVGRTG +TP +E V VAG VS+ATLHN Sbjct: 330 TTSRAPRWAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVLVAGSHVSSATLHNQ 389 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER-VEG 420 DE++R G+ IGD V++R+AGDVIP+++ V S R R V P+HCP CG+ + EG Sbjct: 390 DEVKRKGVLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSHCPSCGAPLAPAKEG 449 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 + RC C AQ + + R A D++G+GD+ L + E Sbjct: 450 DVDLRCPNQASCPAQITQRISFMGGRSAFDIEGLGDESALALTQPE 495 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 12/216 (5%) Query: 455 GDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS-AQNVVNALEKAKETTFARFLY 513 G + I +L +G+ + P +++ LEKAK+ R L Sbjct: 593 GWRQIRAFWSTGR--------RLKSGEWAKGQEPKPTQDLTKMLDQLEKAKQQPLWRVLN 644 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 AL IR VG + LA +F +L+AL+ AS+ EL V VG ++A V +F + +++++ Sbjct: 645 ALSIRHVGPTASQALADHFRSLDALQQASVAELAAVEGVGQIIAEAVVAWFQVDWHKHIV 704 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 + A GV EE+ AG T+V++G++ R+ AKA ++ GAK + SVS Sbjct: 705 NTWAASGVRMEDEA---TEELPQTLAGLTIVVSGTMPGYDRESAKAAIIARGAKASSSVS 761 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 KKT LV+AG AGSK KA+ LG+ ++DE + LL Sbjct: 762 KKTSLVVAGPGAGSKATKAETLGVPLVDETKFQLLL 797 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 206/481 (42%), Positives = 278/481 (57%), Gaps = 16/481 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ + + + + Y++ DAP DA YD +R L+ LE + P L +P SPT R Sbjct: 69 EAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSPQSPTHR 128 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGL 119 VG F+ +RH M+SLD+VF E + V L E + CE+K+DGL Sbjct: 129 VGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCEVKIDGL 188 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG--ENIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI IP L G E+IP +E+RGEVF+ Sbjct: 189 ALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRGEVFMR 248 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG---- 233 F K+N + G FANPRNAAAGSLRQ DPRITA R L+F+ +G+G L G Sbjct: 249 WDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRWGAGHA 308 Query: 234 ----ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 ++ + +KKWG+PVS S +E+L E R + +DG+V+ Sbjct: 309 GNGHDVVNDQSEAYELYKKWGVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHALDGIVV 368 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ L Q LG +RAPRWA+A+K+P +E T + D+ QVGRTG +TPVA L+PV+VA Sbjct: 369 KVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLKPVYVA 428 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE---VVFPT 406 G VS TLHN E+ER G+ IGD VV+R+AGDVIP++V VL R E V PT Sbjct: 429 GSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELRRFVMPT 488 Query: 407 HCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP CG+++ EG+ RC C AQ E + + SR+A D++ +GD+ L Sbjct: 489 RCPSCGAELAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGDQSAIALTNP 548 Query: 466 E 466 E Sbjct: 549 E 549 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 108/184 (58%), Gaps = 8/184 (4%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 + +++ ++KA+ R L AL IR +G TA +A+ FGTL+A+E AS++EL ++ + Sbjct: 708 TRKMLDEMDKARHADLWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDGI 767 Query: 553 GIVVASHVHNFF---AEESNR--NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 G +A V +F E N V+ A GV A + AGKTVV+TG Sbjct: 768 GSEIAESVVTWFTAAREPGNWRGAVLDAWKAAGV---GVGQAQASGLPQTLAGKTVVVTG 824 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 SL SRD AK +V G K AGSVSKKTD V+ GE AGSK AKA+ELGI +++E + + Sbjct: 825 SLEGFSRDSAKEAIVLRGGKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLNEDQFKQ 884 Query: 668 LLGS 671 LL + Sbjct: 885 LLDT 888 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 206/481 (42%), Positives = 283/481 (58%), Gaps = 20/481 (4%) Query: 6 QQLTELRTTLRHH----EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +Q L + L + Y+V DAP DA YD M L+ LE++ P+L TP SPT R Sbjct: 46 EQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDTPQSPTHR 105 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGL 119 VG F+ +RH M+SLD+VF E A+ V+ L+ E + CE+K+DGL Sbjct: 106 VGGTFSNDFTAVRHPSQMMSLDDVFSFEELRAWYDGVRKDLEWPEDKLLPMTCEVKIDGL 165 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI +IP L G +IP +E+RGEVF+ Sbjct: 166 ALNLIYRNGVLTQGLTRGDGVTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRGEVFMR 225 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP- 236 F K+NE G FANPRNAAAGSLRQ DPRITA+R L+F+ +G+G L G Sbjct: 226 WDDFHKLNEANEDAGRPPFANPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVWGSGKP 285 Query: 237 -------DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 ++KWG+P+S +++L E R + +DG+V+ Sbjct: 286 VDVADEVRNQSDAYTMYRKWGVPISPHNREVTDFDQILDMIEYYGEHRGDIEHALDGIVV 345 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ LA Q +LG +RAPRWA+A+K+P +E T + ++ QVGRTG +TPVA L PV+VA Sbjct: 346 KVDDLALQRRLGSTSRAPRWAIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAILNPVYVA 405 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE---DTREVVFPT 406 G VS TLHNA E++R G+ IGD VV+R+AGDVIP++V V+++R D RE V PT Sbjct: 406 GSTVSRTTLHNAYEVKRKGILIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLREFVMPT 465 Query: 407 HCPVCGSDVE-RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP C + + EG+ RC C AQ E + + +R+A D++ +GD+ L Sbjct: 466 RCPSCDTVLRYEKEGDKDLRCPNSESCPAQLAERVINLAARKAFDIEHLGDQSAVALTNP 525 Query: 466 E 466 E Sbjct: 526 E 526 Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 73/184 (39%), Positives = 102/184 (55%), Gaps = 9/184 (4%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 + +++ +EKAK T +R L AL IR VG TA LA +F TL+AL AS EEL+++ + Sbjct: 680 TRKMLDEIEKAKHTDLSRVLVALSIRHVGPPTAFTLAKHFKTLDALADASAEELEQIDGI 739 Query: 553 GIVVASHVHNFFAEE-----SNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 G +A + FF E V+ A GV + E + GK+VV+TG Sbjct: 740 GAEIADSIATFFEEARMPGNWRGRVLEAWKAAGVGMS----THDEGLPQTLEGKSVVVTG 795 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 +L SR+ AK + G K +GSVS+KTD V+ G GSK KA+ELGI +IDE + Sbjct: 796 TLEHFSRESAKEAIERRGGKASGSVSRKTDWVVVGANPGSKATKAEELGIPIIDEQQFDT 855 Query: 668 LLGS 671 LL + Sbjct: 856 LLAT 859 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 209/471 (44%), Positives = 277/471 (58%), Gaps = 9/471 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + + T L +R ++ Y+V DAP DA YD MREL LE +HP L TPDSPTQ+V Sbjct: 16 EVRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPGLRTPDSPTQQV 75 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ + H MLSLDN F E +A+ +RVQ L++ V + CELK+DGLA++ Sbjct: 76 GGTFSTEFTAVDHVERMLSLDNAFSREDLVAWAERVQRDLESTVPVEYLCELKIDGLAIA 135 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQAG 180 +LYE G LV AATRGDG TGED+T NVRTI IP L G+ P +E+RGEVFLP Sbjct: 136 LLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRGEVFLPVDA 195 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT-- 238 F +NE G FANPRNAAAGSLRQ DPR+TA RPL + +G+G L G+ T Sbjct: 196 FRALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTWGDGRGTGI 255 Query: 239 --HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 WG+P S + S +EV E R + +IDGVV+KV+ +A Sbjct: 256 DRQSQVYDLLAGWGVPTSTHTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVVVKVDDIAL 315 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q +LG +RAPRWA+A+K+P +E T + +E +GRTG TP A +EPV VAG V A Sbjct: 316 QRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLVAGSTVRQA 375 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR--EVVFPTHCPVCGSD 414 TLHN D ++ G+R+GD VV+R+AGDVIP++V +D E P CP CG+ Sbjct: 376 TLHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPADCPECGTP 435 Query: 415 VERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 + + EG+ RC C AQ + L+H SR A D++ +G+ L + Sbjct: 436 LRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGEVTAAALTQ 486 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 101/220 (45%), Gaps = 45/220 (20%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA------------ 540 A+ +++ L+ AK R + AL IR VG A LA FG++ AL A Sbjct: 586 ARTLLDQLDLAKTKELWRAIVALSIRHVGPTAARALAQEFGSMAALRAVVDPTARGAVDA 645 Query: 541 --------ASIEELQK----------------------VPDVGIVVASHVHNFFAEESNR 570 A ++ + V VG +A + ++FAE +R Sbjct: 646 PQEAVDGGAVADDAVEGSIADEDGAPAADAAAVARLAGVEGVGPTIARSLLDWFAEPWHR 705 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 ++ A GV + E G TVV+TGSL + SRD AK ++ G K +G Sbjct: 706 EIVDRWAAAGVVMQDAV---DESTPRTLEGVTVVVTGSLERFSRDGAKEAILGRGGKASG 762 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 SVS+KTD V+ GE AGSK KA+ELG+ ++DEA LL Sbjct: 763 SVSRKTDFVVVGENAGSKETKARELGLRILDEAGFEALLA 802 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 198/481 (41%), Positives = 271/481 (56%), Gaps = 16/481 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ + + + + Y++ D+P DA YD MR L LE P L P SPT R Sbjct: 60 EAAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHR 119 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGL 119 VG + F +RH M+SLD+VF E + V L E + CE+K+DGL Sbjct: 120 VGGSFSNDFVSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGL 179 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG--ENIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI +IP L G E++P +E+RGEVF+ Sbjct: 180 ALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGEVFMR 239 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG---- 233 F +N + G FANPRNAAAGSLRQ DPRITA R L+F+ +G+G L G Sbjct: 240 WDDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWGADHP 299 Query: 234 ----ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 ++ + +WG+PVS S +E+L E R + +DG+V+ Sbjct: 300 RGTHDVVADQSQAYDLYTRWGVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHALDGIVV 359 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ L Q LG +RAPRWA+A+K+P +E T + ++ QVGRTG +TPVA L+PV+VA Sbjct: 360 KVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLKPVYVA 419 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT---REVVFPT 406 G V+ TLHN E++R G+ IGD VV+R+AGDVIP++V VL R RE V P Sbjct: 420 GSTVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLREFVMPE 479 Query: 407 HCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP CG+ + EG+ RC C AQ E + SR+A D++ +G++ L Sbjct: 480 FCPSCGAKLAPAKEGDKDIRCPNVESCPAQLTERVISLASRKAFDIEHLGEQSAIALTNP 539 Query: 466 E 466 E Sbjct: 540 E 540 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 9/196 (4%) Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + + R G + + + + ++KA+ R L AL IR +G TA +A+ G+L A+E Sbjct: 726 DVPVIIRPGE-NTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLAAIEK 784 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAE-----ESNRNVISELLAEGVHWPAPIVINAEEID 595 A+IE+L + VG +A V N+FA + + A GV + Sbjct: 785 ATIEDLTAIDGVGPEIAESVVNWFAATREPGDWRGATLRAWQAAGVGVDE---AETSSLP 841 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 AGKTVV+TGSL SRD AK ++E G K AGSVSKKTD V+ G AGSK KA+EL Sbjct: 842 QTLAGKTVVVTGSLEGYSRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKAIKAEEL 901 Query: 656 GIEVIDEAEMLRLLGS 671 GI ++ E + +LL + Sbjct: 902 GIPMLGEIQFAQLLET 917 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 583 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 199/680 (29%), Positives = 328/680 (48%), Gaps = 35/680 (5%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPE----LITPD---SPTQRV 62 EL L+ + + Y+ + + D YD + EL + PE + D S ++V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 63 G--AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 + +H+ MLSL+ + E + R+ + NN + + + K+DG++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQ--YILQEKIDGVS 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L A TRGDG GE++T N I+ IP + NI +E+RGE+F Sbjct: 132 ISLYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTI---NIKENIELRGEIFFSLKL 188 Query: 181 FEKI-NEDARRTGG---KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 FE + NE + G K + PRN A+G L+ L L+ F Y V E L Sbjct: 189 FESLKNEFLDKQDGTKNKKWNTPRNKASGILKSL-KTTDESSWLSCFIYEVVSPENFNL- 246 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 T K G + + E+ + F + + ++IDG+VIK+N L+ Sbjct: 247 KTQKQLFDFLKIQGFNL-PKFEFIENENLIENFITNFKFEDDQRDYEIDGLVIKLNDLSL 305 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 + LG ++ ++A+KF + MT + D+ VGRTG IT A+L+ V + G + A Sbjct: 306 YDLLGKTSKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKAA 365 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN + I+ + + IGDKV I +AG++IP+VV +V + ++ CP C + + Sbjct: 366 TLHNYEYIKNIKINIGDKVYIEKAGEIIPRVVKLVSPKNDQNY--FSPIEFCPSCKNKLS 423 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 E C C ++ + LK+FVS+ M++ +G K I+ K +V D++ Sbjct: 424 WSENMLNQFCLNP-DCIEKKIQKLKYFVSKDGMEIQELGGKKIELFFAKGWVKKIEDIYN 482 Query: 477 LT--AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF-- 532 L L LE S +++ +E++K+ + + ALGI+ +G+ A L Sbjct: 483 LKNNYDDLLKLENFQEHSVNVLLHKIEESKDVYTWKLIAALGIKNIGKKLAKSLVKIIFE 542 Query: 533 ---GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 L +L + +EL+K + G V + FFA + NRN+I L G I Sbjct: 543 NDQKNLLSLLEFNYDELEKYDEFGSVKIESLKEFFANDENRNLIQFLDQNGFELKMEKEI 602 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 + KT ++TG+L + RD K +++ G ++ S+SKK D +I G+ GSK Sbjct: 603 IQ---STKLENKTFLITGTLEK-PRDFYKNLIIQNGGIISSSISKKLDYLIVGQNPGSKE 658 Query: 650 AKAQELGIEVIDEAEMLRLL 669 KA EL I++IDE + ++L Sbjct: 659 KKAMELNIKIIDEEFLKKML 678 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 195/672 (29%), Positives = 321/672 (47%), Gaps = 39/672 (5%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ EL L Y+ + + EYD L EL+ LE + ++ SPT VG Sbjct: 6 RMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEE-SGIVLAASPTVNVGYEA 64 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ ++ HE MLSL+ + + + L E + KLDGL V I Y+ Sbjct: 65 SSSLEKMAHEKKMLSLNKTKSVDELVEW-------LGEQEGL---LSPKLDGLTVVITYD 114 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G L A TRGDG GE IT N +T IPLK+ RL +RGE ++ F K+NE Sbjct: 115 EGSLKLAVTRGDGVEGEVITKNAKTFIGIPLKIP---YAGRLVLRGEAYITYGDFNKLNE 171 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCY-GVGVLEGGELPDTHLGRLLQ 245 + + NPRN +GS+R LDP IT +R + F + +G +E G + + Sbjct: 172 EIDDAAK--YKNPRNLCSGSVRNLDPSITKERRVRFKVFSMLGGIEHG--FNKKRECMKW 227 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 G V T + E + + + E+ +DG+V+ + + LG A+ Sbjct: 228 LGDIGFDVVH--TEMVTGENLKDTMNSLMEELQNGDIPVDGLVLTYDDIKTCNLLGETAK 285 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 P+ ++AFK+ + T + VE+ RTG + PVA PV ++G V A LHN D ++ Sbjct: 286 YPKDSIAFKWSDELYDTELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRAALHNLDILD 345 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE-RVEGEAVA 424 L L GDK+ + +A +IPQV + + + +P CPVCG ++ EG V Sbjct: 346 GLALGKGDKIRVYKANMIIPQVYENITR-----SGNIEYPKVCPVCGCGLKLETEGARVL 400 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKL 482 RC C A+ + + HF + +++ G+ +K I++L+ + DL + ++ Sbjct: 401 RCVND-DCPAKNAKRIVHFAGKSGINIKGISEKTIEKLIATGIIRNEVDLLDIENYKDEI 459 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG-TLEALEAA 541 L+ KS +N+ A++ AK T RF+ A+ +G A +AA G + L Sbjct: 460 LKLDGFKEKSFENLKKAIDGAKTMTLQRFISAMAFTGIGYTNAGKIAAALGFDVMKLFEL 519 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + E++ + +G V+ ++E+ + + E++ + +E+D GK Sbjct: 520 TPEKINNIEGLGEVLTESFMAELSDENMKRRMREIIKR-CKFKEITRTRNDEVD----GK 574 Query: 602 TVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKAQELGIE 658 V+TG+++ +RDD K ++ G +V SVS TD +I E+ SK KA+ELGI Sbjct: 575 KFVITGNVNIFKNRDDLKQKIEISGGQVVSSVSSNTDFLINNDRESTSSKNKKAKELGIA 634 Query: 659 VIDEAEMLRLLG 670 +I E ++ +LG Sbjct: 635 IISEKDIAEMLG 646 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 205/701 (29%), Positives = 328/701 (46%), Gaps = 71/701 (10%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL-----ITPDSP------T 59 L +R + Y + AP IPD YDRL+ LR L+ HP L TP+ P T Sbjct: 35 LAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEADAT 94 Query: 60 QRVGAAPLAAFS-QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 + P +RH MLSLD + E ++ ++ + + K+DG Sbjct: 95 ASI--PPAERLGAPVRHTRAMLSLDKCYGPEDLYSWTEKFEGEV--------LVMPKMDG 144 Query: 119 LAVSILYE-NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG---------ENIPARL 168 +A S+ Y+ G L AATRG+G+ GEDIT NV + +P +L + + Sbjct: 145 VACSLRYDAEGKLFLAATRGNGSEGEDITVNVLEVEDVPQQLDPAAFAELPGPDGAAPAV 204 Query: 169 EVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG 228 EVRGE+F+ + FE+ E ++NPRN AG+++ + T L+F+ Y + Sbjct: 205 EVRGELFMKLSVFERYKEQ--------YSNPRNLTAGAIKHKERGKTKAYTLSFYAYDL- 255 Query: 229 VLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR--PTLGFDIDG 286 +G ELP T + + G V + + E+ A Y + R + ++IDG Sbjct: 256 --QGTELP-TEREKFASLRALGFAVEECDFVPRG--ELQAAYERWSARRSADEIDYEIDG 310 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 VV + + +A+Q ++G PRW++A+KF T + +V + V RTG ITPVA +P+ Sbjct: 311 VVYRASEVAEQRRMGETGHHPRWSMAYKFQGDTGTTTLEEVLWSVSRTGTITPVAIFKPI 370 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 ++G +++ A L N + + LGL G + + R G VIP V VV +T ++ P Sbjct: 371 ELSGAMIARAGLFNLNHFDELGLTAGAAIEVTRRGGVIPYVERVVTPGAEGETFDI--PK 428 Query: 407 HCPVCGSDVERVE--GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 CP C S+ R + C+ CG+ R L+HF + +D+ G G K++ Q V+ Sbjct: 429 RCPACNSEAVRRKKRDGEFLYCSKPEGCGSARLGELQHFA--KVVDIQGFGPKVVTQAVD 486 Query: 465 KEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 + +PAD + L L +R+G +SA+N+V ++ + FL +LGI +G+ Sbjct: 487 AGLLSSPADFYTLRVEDLEEFDRLGRRSAENLVAQVDAHRRIELPIFLQSLGIDHLGKQN 546 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A LA F TL + S E L +V + +A + + +I LL Sbjct: 547 AVLLANEFRTLAGVRGVSREALLEVKGIKDAIADALLAGLETRA--ELIDALLEHVTVVD 604 Query: 585 API-------VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD 637 P A + GKT + TG+L +R A+ ++ G A VSK D Sbjct: 605 LPERDPEAEAEAAAAAAEGALGGKTFLFTGALEAFTRKQAQEKVEANGGVPASGVSKSLD 664 Query: 638 LVIAGEAAG---SKLAKAQEL-----GIEVIDEAEMLRLLG 670 ++ G G SK KA++L ++VI E + L ++G Sbjct: 665 YLVVGAGKGAKSSKQKKAEKLIDGGAALKVISEGDFLAMIG 705 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 191/683 (27%), Positives = 300/683 (43%), Gaps = 53/683 (7%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ L L Y+ + D E+D +L++LE + +I PDSPTQ V A Sbjct: 3 KEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEE-TGIILPDSPTQNVSAD 61 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 +A + HE P LSL E + E KLDGL + + Y Sbjct: 62 NVAG-KKEEHEFPALSLAKTKKVEDLAKW----------AENKPIWLSWKLDGLTLVVTY 110 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 +NG L TRG+G G +IT I I L L +RGE + FE+ N Sbjct: 111 DNGKLTKVVTRGNGHIGTNITHLSTAIDGI---LQTIPYKGHLVIRGEAVISYPDFEQFN 167 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 +A +ANPRN A+GSL D R L + + + E E ++ GR+ Sbjct: 168 MEAEEE----YANPRNLASGSLTLKDINEVKARHLRWIPFTLVYTE--EEINSWGGRMEW 221 Query: 246 FKKWGLPVSDRVTLCE-SAEEVLAFYHKVEED-----RPTLGFDIDGVVIKVNSLAQQEQ 299 + G V DR + + + + A H E + +DG+VI Sbjct: 222 LEHQGFRVVDRELIEQPTVNNIEAVIHHWTERVTGVSSSPFPYPVDGLVISYEDTVYAAT 281 Query: 300 LGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 R AFK+ + T + +E+ + I+PVA P+ + G V A+L Sbjct: 282 GSVTGHHATRAGYAFKWQDESAETELDYIEWSCAAS-TISPVAVFRPIELEGTTVKRASL 340 Query: 359 HNADEIERLGLR-IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 N E ERLG+ G K+ + +A +IP+V+NV+ E P CPVC S E Sbjct: 341 CNISECERLGIGDKGTKIAVIKANKIIPKVINVI-----ESVGTFHIPETCPVCHSATEV 395 Query: 418 VEGEA----VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 E E CT C A++ + FVS+ +++DG+ ++ + + + +V AD Sbjct: 396 SESEVSGTRTLHCTNTH-CPAKQLKKFGRFVSKEGVNIDGLSEQTVQKFINLGWVREYAD 454 Query: 474 LFKLTAG--KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 LF LT +L +E G KS ++ A+EKA+ R L+AL I VG+ L + Sbjct: 455 LFHLTEHATELRTMEGFGNKSVTKLLAAIEKARNVEARRLLFALNIPLVGQDVCNRLLSA 514 Query: 532 FGTLE----ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 + E A+E+A+ + + +G ++ + + N++++ LLAE Sbjct: 515 YPLEELIKTAIESAAEDVFSTIAGIGPEKSASFVRWMKDTDNQSMLQHLLAELN----VS 570 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EA 644 ++ G T V+TG + +R++ KA + G KV GSVSK T+ +I E+ Sbjct: 571 QPSSAPTGDSCQGLTFVVTGDVHHYKNRNELKAYIESQGGKVTGSVSKSTNYLINNDVES 630 Query: 645 AGSKLAKAQELGIEVIDEAEMLR 667 K KA+EL I +I E E + Sbjct: 631 TSGKNQKAKELSIPIISEDEFIA 653 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 199/470 (42%), Positives = 275/470 (58%), Gaps = 13/470 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ E+ + + YH D P + D YDRL+RELR LE +HPEL SP Q V Sbjct: 13 DARERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSV 72 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA A F + H + SL +VF + + + E+K+DGLAV+ Sbjct: 73 GAPAAAGFENVAHLERLYSLQDVFTLDDLKEWYE------GTAGAARCTAEVKIDGLAVN 126 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y G LV ATRGDG TGED+T+NVRTI ++P L G + P +E+RGEVF+P A F+ Sbjct: 127 LRYVGGELVVGATRGDGVTGEDVTANVRTISSVPQSLRG-DFPDVVEIRGEVFIPLAKFD 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-----GELPD 237 N R G K FANPRNAAAGSLRQ DP++ A+RPL F +G G ++G E Sbjct: 186 SFNARQRAAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRIDGTSSAVDEKLA 245 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + G F++WG+PVS V L S ++V F + + R L IDG V K++S A+Q Sbjct: 246 SQKGLYELFQEWGVPVSPYVRLVSSWDDVEGFVREYADLRSDLIHGIDGAVFKIDSRAEQ 305 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG +R PRWAVA+K+P +E T + D++ QVGRTG +TP A ++PV VAG V+ AT Sbjct: 306 EDLGATSRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKPVTVAGSTVAQAT 365 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN E+ R G+ IGD VV+R+AGDVIP+V+ V + R RE P+ CP CG+++ Sbjct: 366 LHNPSEVARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMPSACPSCGTELAP 425 Query: 418 -VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 +G+ RC C AQ E + + SR A+DV+ +G++ L + E Sbjct: 426 AKDGDVDIRCPNARSCPAQLAERVAYIGSRAALDVEALGEETSLWLTDPE 475 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 2/194 (1%) Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 +L + G K + VV L+ A+ R + AL IR VG A +A+ FG+L A Sbjct: 598 KPAELASPSKPG-KMIELVVAELQAARTKELWRKIVALSIRHVGPTAAKAIASSFGSLSA 656 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 AS+EE+ ++ VG V+A ++F + ++ A GV + +E+ Sbjct: 657 AREASVEEMAQIDGVGRVIAQSFLDWFDVPWHTEIVEAWEAAGVVFADE-AAERQELPQT 715 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 G TVV TG+L+ +RD K + G K AGSVSKKT V+ G GSK AKA+ LG+ Sbjct: 716 LKGMTVVATGALAGYTRDSVKEAIEARGGKAAGSVSKKTAAVVVGANPGSKAAKAEALGV 775 Query: 658 EVIDEAEMLRLLGS 671 +DE + LL + Sbjct: 776 PTLDEGQFEELLRT 789 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 197/508 (38%), Positives = 268/508 (52%), Gaps = 47/508 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q++ L + Y+ DAP + DAEYD L +ELR LE +P+L DSPT+ Sbjct: 19 ETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAEDSPTRT 78 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A A I H M SLDNVF E + L +V + ELK+DGLA+ Sbjct: 79 VGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGG--EVRYLTELKIDGLAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YE+G LV+AATRGDG TGED+T N I IP +L G PA +EVRGEVF+P A F Sbjct: 137 NLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVRGEVFMPTADF 196 Query: 182 EKINEDARRTGG----------------------------------KVFANPRNAAAGSL 207 E++N+ FANPRN AAG L Sbjct: 197 ERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFANPRNTAAGGL 256 Query: 208 RQ-LDPRITAKR--------PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVT 258 RQ LD + +R L +G+G + + WGLP S + Sbjct: 257 RQQLDKKEGLEREAGEARLAALRLTVHGLGAWPDPPV-GSQSEMYELLASWGLPTSRYMD 315 Query: 259 LCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQ 318 + +S +EV A+ E R L +IDG+V+KV+S AQQ LG +RAPRWA+A KFP + Sbjct: 316 VVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPRWAIAVKFPPE 375 Query: 319 EQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIR 378 E T + D++ QVGRTG +TP +EPV VAG V ATLHN ++ER G+ IGD +V+R Sbjct: 376 EVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKGVLIGDTIVLR 435 Query: 379 RAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVARCTGGLICGAQRK 437 +AGDVIP+++ V S R R V P CP CG+++ EG+ RC C AQ Sbjct: 436 KAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPEREGDKDWRCPNQRDCPAQVT 495 Query: 438 ESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 ++H SR A D++ +G++ L + Sbjct: 496 GRVEHAGSRGAFDIESLGEESAIALTDP 523 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 82/247 (33%), Positives = 116/247 (46%), Gaps = 44/247 (17%) Query: 464 EKEYVHTPADLFKLTAGKLTGLERMGP--------------------------------- 490 ++ + T ADLF LT L G+ P Sbjct: 587 QQGVITTGADLFDLTPEGLEGVFVWQPERRNGEPTGDWRIQPAFWSRPQFRHYKRDEEWR 646 Query: 491 --------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 KS + +++ LEKAK R L AL IR VG A LA +G+++A+ AS Sbjct: 647 QQKAPSVLKSTEVLISELEKAKSQPLWRVLVALSIRHVGPTAARSLATAYGSMDAIREAS 706 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E+L VG ++A V +FA + +R ++ GV + E G T Sbjct: 707 VEQLSDTDGVGEIIAEAVVEWFAVDWHRELVDGWARSGVRMADEV---EEGFTKTLEGLT 763 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV+TG L +RD AK ++ G K +GSVSKKTD V+ GE AGSK KA+ELG+ ++DE Sbjct: 764 VVVTGGLEGFTRDGAKEAIITRGGKASGSVSKKTDFVVVGENAGSKETKARELGLRILDE 823 Query: 663 AEMLRLL 669 A + LL Sbjct: 824 AGFVALL 830 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 182/684 (26%), Positives = 295/684 (43%), Gaps = 47/684 (6%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I+ ++ EL +L Y+ +P+ E+D + EL +LE + I DSPTQ Sbjct: 4 NKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKE-TGYIRHDSPTQN 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G A ++ HE P LSL E + + KLDGL + Sbjct: 63 AGYEAEAG-NREPHEYPALSLAKTKSIEELKKW----------AGDMPIWLSWKLDGLTL 111 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+ G LV TRG+GT G +IT I P ++ + VRGE + F Sbjct: 112 VLTYDGGRLVKILTRGNGTVGSNITFLQDAISGFPKEIP---YKGHMVVRGEATISYTDF 168 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + +N+ K +ANPRN A+G+L D +R + F+ + + ++ + + Sbjct: 169 KLLNDTIEDDDEK-YANPRNLASGTLNLDDVEEVKRRHVVFYAFTLVHIDDDII--SWGD 225 Query: 242 RLLQFKKWGLPVSDR--VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 R+ V R E V + VE R + +DG+VI + A Sbjct: 226 RMSYLSDMKFNVVKREATDAAGLDEAVKRWTRDVESGR--MDVPVDGLVICYDDTAYAAG 283 Query: 300 LGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 R AFK+ + T +R +E+ I+PVA EPV + G VS A+L Sbjct: 284 GSVTGHHATRAGFAFKWQDEAVDTRLRYIEWSCA-VSTISPVAVFEPVQIEGTTVSRASL 342 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD---- 414 N EIERLG+ + + +A +IP+ + V + EV P CPVC Sbjct: 343 CNLTEIERLGVGKECTLSVIKANKIIPKCIAV-----KDAVGEVEIPKECPVCHHPTRIF 397 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 V + G CT C A+ + FVS+ MD+DG+ + + + + + ++ D+ Sbjct: 398 VSKNSGVKTLHCTNP-DCTAKNVKKFSRFVSKSGMDIDGLSVQTMLKFINEGFIKQFPDI 456 Query: 475 FKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L K++ +E G KS N+ A+EK++ ++AL I +G + Sbjct: 457 YHLPEHFDKISSMEGFGEKSCMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGKKIVNAI 516 Query: 533 ---GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 G + + A+ + + +G + + ++A N + L+ E V Sbjct: 517 GFDGFADRMRNAT--DFVDIDGIGQEKSGSILEWYANPQNSTMFEALIKE---LDIEKVD 571 Query: 590 NAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAG 646 + + GKT V+TG + +R + KA + G KV GSVSKKTD ++ E+ Sbjct: 572 IKDMSEGSLNGKTFVITGDVHDFANRSEFKAYVESQGGKVTGSVSKKTDYLVNNDTESTS 631 Query: 647 SKLAKAQELGIEVIDEAEMLRLLG 670 SK KA+ELGI +I E + + G Sbjct: 632 SKNKKAKELGIPIISEDTFIEMFG 655 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 224/689 (32%), Positives = 334/689 (48%), Gaps = 53/689 (7%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E++ TT Y D E+ DAE+DRL+ ++ E + I P+ Sbjct: 37 EEEYQAAVTTALSAAKAYETTDVEEMNDAEFDRLLAKIASHEAANG--IEPEHDLHDTIG 94 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A + H PM SL+ E++ + F + E K+DGLA+S+ Sbjct: 95 HGGAGGGDVEHATPMKSLEK-PGEDAVIEFAAKHPKA---------VIEPKIDGLAISVR 144 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG +V AA RGDG TGED+T VR + +P EVRGE++L K Sbjct: 145 YENGKMVRAARRGDGYTGEDVTDRVRGVDGLP----EMAGDGDYEVRGELYLNDENKAKA 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G FAN RN AG L + D +F Y + E + HL + Sbjct: 201 NAIRQAAGKAPFANARNGVAGMLNKQDGSYAGL--FSFAAYSTTIDEKAD----HLDSMQ 254 Query: 245 QFKKWGLPVSDRV--TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 Q + G + + AE+ +A + +R L F +DG V+KVN+ A++ +LG Sbjct: 255 QLEGMGFTTARSLLPQSVLDAEDPMAAIAALGAERKGLNFLMDGAVLKVNTAAERAELGE 314 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +RAP+WAVA+K+PA E+ T + D+E+ +G+TG ++ ARL PV V G +V A+LHN Sbjct: 315 GSRAPKWAVAYKYPAVEEPTVIEDIEYNIGKTGRLSIRARLTPVEVDGSVVEYASLHNVG 374 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 ++ +RIGD V +A D+IPQV R E ++ P+ CP C ++ Sbjct: 375 HLQAADMRIGDTVSAYKANDIIPQVHLPRADLRDESSQPWQPPSVCPQCSEPFDK--STE 432 Query: 423 VARCTGGLICGAQRKESLKHFVSRRA-MDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 + RC C + + SR A +D++G+G I D L+EK+ V +DLF L + Sbjct: 433 LWRCHTPE-CS--VSGRISYAASRDAGLDIEGLGGSIGDALIEKDLVKDVSDLFYLGEDQ 489 Query: 482 LTGL----------ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 L + +G K+A ++ +EKAK R + AL +R G LAA Sbjct: 490 LAEVELGETSTGGTRTLGQKNAAKIMAEIEKAKSQPLNRVITALSMRFTGRTFGRRLAAE 549 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 FGT+EAL+AA++ +L V +G A +H + N VI++L GV+ AP A Sbjct: 550 FGTMEALQAATVSQLANVEGIGQKKAEVIHEQL--KKNAPVIAKLREAGVNMGAPKAAPA 607 Query: 592 EEID----SPFAGK--TVVLTGS-----LSQMSRDDAKARLVELGAKVAGSVSKKTDLVI 640 + GK VV+TGS L +SR + + G K +GSVSK TDL++ Sbjct: 608 AGAKAPKLTKPDGKPMNVVVTGSVKGSPLGSLSRSGVQELIEAKGGKASGSVSKTTDLLV 667 Query: 641 AGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 GE SK KAQELGI ++ E +++ Sbjct: 668 CGEPGSSKFLKAQELGIRIVTPDEFAQMV 696 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 244/766 (31%), Positives = 354/766 (46%), Gaps = 121/766 (15%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPE-----IPDAEYDRLMRELRELETKHPE------L 52 I ++L L + LR H+ LY+ + IP D +R + + E Sbjct: 102 IYEELVRLASDLRRHDALYYESEMARNSVGRIPPCSNDSNVRVAWAYKPRGTEDASETFF 161 Query: 53 ITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVT 109 P PT + + H PMLSLDNV EE LA+ +R++ +L +T Sbjct: 162 CRPRRPTPNDATRIVVDRVKRPHVRPMLSLDNVHREEELLAWLERIRKKLTVDDGPSSLT 221 Query: 110 WCCELKLDGLAVSILYENGV-------LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 E KLDGL++S YE V A+TRGDG G+D+T V+ +PL L Sbjct: 222 ILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTLDWA 281 Query: 163 NI---------PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDP- 212 ++ P LE+RGE+ LP F+ + G FAN RNAA+G L + + Sbjct: 282 SLVADPESYTHPKVLEIRGEIVLPTTVFQSL-----EGEGLAFANARNAASGILLRKESI 336 Query: 213 -----RITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTL-------- 259 + L F+ Y V +G + L R+ G V + V + Sbjct: 337 TDPVASQALREKLCFYAYDVAGDDGFTVSGVQLRRV--LPTLGFRVPEPVAVTRLRLNNT 394 Query: 260 ----CESAEEVLAFYHKVEEDRPTL-------GFDIDGVVIKVNSLAQQEQLGFVARAPR 308 + +L ++H ++ R +D+DG V KV+ + LG RAPR Sbjct: 395 TAWNVNDIQALLKYHHSMQHHRQGKKTSQTYGDYDMDGAVHKVSESDLRIILGQSNRAPR 454 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER-L 367 WA+A KF +T + D+ QVGRTGA+TPVA L+PV +AGV+V ATLHN +++ L Sbjct: 455 WAIAHKFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQVL 514 Query: 368 G----LRIGDKVVIRRAGDVIPQVVNVVL-----SERPEDTREVVFPTHCPVCGSDVERV 418 G + V++RRAGDVIPQVV + S DT V FP CP CGS V Sbjct: 515 GSTTTIAKESSVLVRRAGDVIPQVVQRIAGTDAGSNNGFDTISVAFPETCPACGSPVVTD 574 Query: 419 E---------GEAVARCTGG-LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 E V RC G C + S+ H VSR A+DV G+ + I QL+E ++ Sbjct: 575 EVNKTASKETAGQVLRCGGPQWNCTPRAVGSIAHAVSRDALDVTGLSEARIMQLIEAGFI 634 Query: 469 HTPADLFKLTA-----GKLTGLERMGPKSAQNV---VNALEKAKETTFARFLYALGIREV 520 P+D+F L KL ++ GPKSAQN+ N + K + +RF+Y+LGIR Sbjct: 635 SRPSDIFALAKSPTQLEKLAEMDGWGPKSAQNLAAVANRIAKN-GISLSRFVYSLGIRFS 693 Query: 521 GEATAAGLAAYFGTLEAL----EAASI-----------------------EELQKVPDVG 553 G ++A +AA +G++E EAAS EE +G Sbjct: 694 GVHSSALIAAAYGSVEDFLKDVEAASTLPIKQVQDQESNDEQVQSFARLREETDITKGIG 753 Query: 554 IVVASHVHNFFAEESNRNVISELLAEGVHW--PAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 V+ + + F ++ L + + + +V++ P VV TGS+S+ Sbjct: 754 PVLLNSLDTFAQDQELVEAAESLASSILVLADDSAMVVSTLATTGPLQDMAVVFTGSISE 813 Query: 612 MSRDDAKARLVELGAKVA-GSVSKKTDLVIAGEAAGSKLAKAQELG 656 MSR +AK +GAK GS+SK T LV+AGE G KL +A++LG Sbjct: 814 MSRSEAKKWAKVMGAKSTPGSISKLTGLVVAGEKGGKKLEQAEKLG 859 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 228/694 (32%), Positives = 337/694 (48%), Gaps = 44/694 (6%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + L +RH+ Y+Y+V+D IPD+ YD+L+ L+ LE +HPE +T DSPTQ VG Sbjct: 4 RHEYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGH 63 Query: 65 APLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVTWCCELKLDGLA 120 + F ++ PMLSLDN+F + + ++ + + K +E E K+DGL+ Sbjct: 64 PVYESHFELVKRVKPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKMDGLS 123 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + Y + A+TRGDGTTGED+T N + IP L + +RGEV + A Sbjct: 124 LDVNYTYDTMELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGG-VSIRGEVVVRLAD 182 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 + +IN D G K FANPRN AAGSLRQ DPRIT +R L F Y V G + T Sbjct: 183 YNQINADLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLG-DPEATWY 241 Query: 241 GRLLQFKKWGLPVSDRVTLCESAE-----EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 K+ G +D + A + + +R + F++DG+V KV Sbjct: 242 DDQAWLKENGFYTADTGKRLSHDQRGMTSGFPALIAECQAERSSYPFEVDGIVFKVVKHT 301 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 +E LG+ +R PRW A+KFPA + T + V+ QVGRTG +TP+AR+EP+HV G +SN Sbjct: 302 HRETLGYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTTISN 361 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 T+HN E+E+ L G V I RAGDVIP + + E V CP CG+ V Sbjct: 362 VTIHNLKELEQHKLFEGCYVEISRAGDVIPYLERRITDHNGEKLYGEV--EACPCCGTKV 419 Query: 416 ---------ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 E EG C C ++ L + R +++ G+GD+++ L Sbjct: 420 VVVHGKKTKENPEGSRTEYCPNT-KCKDRQVAHLLYCTQRHVLNIKGLGDELVMDLYNAG 478 Query: 467 Y--VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALE-KAKETTFARFLYALGIREVGEA 523 V P L L + + A+ + A+ + R + ALGI + Sbjct: 479 VVDVTRPLSLLMLKHEDFLKI-GQSERMAEKLAMAVTIASANLDLTRVITALGISGAADG 537 Query: 524 TAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 TA LA TLE + A+I+ + ++ D+G V A + FF E++ + G Sbjct: 538 TAERLAREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFFDEDNRKP-------HGQSA 590 Query: 584 PAPIVIN-----AEEIDSPFA-GKTVVLTGS-LSQMSRDDAKARLVELGAKVAGSVSKKT 636 P V + E + + F G T V+TGS +R D + + GA V+ +V+K T Sbjct: 591 WRPYVGDRYLKAPEPLGTLFRPGTTFVVTGSKFGDKARKDLERWFKQNGATVSSTVTKST 650 Query: 637 DLVIAGEA-AGSKLAKAQELGIE--VIDEAEMLR 667 V G KLA A+ELGI + +E + Sbjct: 651 TTVYCGTKYTAHKLATAKELGIPYVIYNEDGITE 684 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 187/705 (26%), Positives = 300/705 (42%), Gaps = 72/705 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L L Y+ + D E+D L+ LE + E + P+SPT Sbjct: 3 EDKHKIMEALVLQLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGE-VLPNSPTNS 61 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V A L + HE P LSL E + E+ KLDGL + Sbjct: 62 VSADKLKG-QKEEHEYPALSLAKTKSETELAKW----------AEERPIWLSWKLDGLTL 110 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+NG L TRG+G G +IT I I L + +RGE + A F Sbjct: 111 VVTYDNGKLTKVVTRGNGHIGTNITHLAAAIDNI---LPTVKANGHIVIRGEAVISYADF 167 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E+ N ++ +ANPRN A+GSL D R L + + + + E + Sbjct: 168 EQFNLESEEE----YANPRNLASGSLTLKDINEVKARHLRWIPFSLVHTD--EEIISWGD 221 Query: 242 RLLQFKKWGLPVSDRVTL----CESAEEVLAFYHKV---EEDRPTLGFDIDGVVIKVNSL 294 R+ K G +R + E+ E+V+A + + + +DG+VI + Sbjct: 222 RMAFLDKLGFNTVERELITLPTAENIEKVIATWTLRVTDTTRKDKQPYPVDGLVITYDDT 281 Query: 295 AQQEQLGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 R AFK+ + T + +E+ T I+PVA +PV + G V Sbjct: 282 EYAATGSVTGHHATRAGFAFKWQDESVETTLEYIEWSCA-TSTISPVAVFKPVELEGTTV 340 Query: 354 SNATLHNADEIERLGLR-IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 A+L N E ERLG+ G K+++ +A +IP+V++V E PT CPVC Sbjct: 341 KRASLCNISECERLGIGDAGTKLMVIKANKIIPKVISV-----TECLGSFTIPTTCPVCH 395 Query: 413 SDVERVEGEA----VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 + VE EA CT C A++ + FVS+ +++DG+ ++ + + + +V Sbjct: 396 QPTQIVESEASGTRTLHCTNHH-CPAKQLKKFARFVSKEGINIDGLSEQTVQKFINLGWV 454 Query: 469 HTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 ADLF L A L +E G KS N++ A+EK+++ + L+AL I VG+ Sbjct: 455 SEYADLFHLQEKAEALKYMEGFGEKSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCT 514 Query: 527 GLAAYFGTLEALEAASIEELQK---------------------VPDVGIVVASHVHNFFA 565 L + + LE L S E + + +G ++ + Sbjct: 515 RLLSAYP-LEELINKSRENMVSPTLQRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQ 573 Query: 566 EESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVEL 624 ++SN + LL E ++E + G T V+TG + +R++ KA + Sbjct: 574 DDSNYAQLQRLLQE----LTVSQTSSEPKGNLCQGLTFVITGDVHHYKNRNELKAYIESE 629 Query: 625 GAKVAGSVSKKTDLVIAGE--AAGSKLAKAQELGIEVIDEAEMLR 667 G KV GSVSK T +I + + K KA+EL I ++ E + + Sbjct: 630 GGKVTGSVSKSTHYLINNDVKSTSGKNKKAKELNIPILSEDDFMA 674 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 198/682 (29%), Positives = 329/682 (48%), Gaps = 58/682 (8%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E+++ +L T++ H+ LY+ PEI DAE+D L EL+ L+ ++ T V Sbjct: 4 EKRILDLEKTIKKHQDLYYN-AQPEISDAEFDALWDELKALDPQNKLFFT-------VPL 55 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F++ H +PM S + D SF A+ ++ + + K+DG ++ + Sbjct: 56 ESTEGFAKSEHIIPMGSQEKAADPPSFEAWALKM-------PFKEYIVQYKMDGASLELQ 108 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLE------VRGEVFLPQ 178 YE G V A TRGDG G+DIT NV ++ + + PA +R EV + + Sbjct: 109 YEEGHFVRAVTRGDGKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIMLR 168 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYG-----VGVLEGG 233 + +K +D AN RNAA G +++ + + L F Y +G G Sbjct: 169 SIHQKYFKDK--------ANCRNAANGLMKKKNGELCE--HLNLFAYDAVQGSIGRPFTG 218 Query: 234 ELP-DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 + P T +L+ KK G + V C+S EV+ + V + RP+L +DIDG+VIK + Sbjct: 219 DAPFKTESEKLVWLKKAGFNCVE-VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIKND 277 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGA-ITPVARLEPVHVAGV 351 ++ ++ P +AFKF +E +T ++++E+ +GA TP+A +EPV +AG Sbjct: 278 TIDPEDMKRAR---PEKQIAFKFSLEEAVTVLKEIEWS--ESGATYTPIALIEPVRLAGT 332 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V A+L N + I+ L L+IG +VV+ + G++IP++ L+E P + +E+ +P C VC Sbjct: 333 TVKRASLANPNIIKALNLKIGSRVVVTKRGEIIPKIEA--LAENPPNVKEIEYPDTCSVC 390 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 GS + C + C ++ ++S +D+ G +I +L E V++ Sbjct: 391 GSPLTNEGTR--LYCPN-MSCPKLIHHRIEKWIS--VLDIRDFGITLIKRLFEMGRVNSI 445 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 DL+ LT +L ++RMG SA+ V AL KE + F+ I +GE L Sbjct: 446 TDLYTLTVEELAAIDRMGKLSAEKVYKALHSKKEISLTEFIAGFDIEGIGETMVEKLEEA 505 Query: 532 -FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 F L L AS + V G V++ + + ++ ++ L+ +G P + + Sbjct: 506 GFNDLNELLGASEADFANVYQFGQVLSHTLVTNLSIL--KDEMTGLIDKGYIKIKPPLTS 563 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSK 648 E + G + TG L+ M R A+A + E G V SV K ++ ++ SK Sbjct: 564 EE--GAVLKGLSFCFTGELNTMKRAQAEALVKEKGGTVKSSVVKGLSYLVTNTPDSGSSK 621 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 KAQELG +I E L L+G Sbjct: 622 NKKAQELGTAIITEEAFLNLIG 643 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 232/741 (31%), Positives = 322/741 (43%), Gaps = 163/741 (21%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAP------EIPDAEYDRLMRELRELETKHPELITPD 56 I+ + EL + Y+ D P + DA+YD L L+ LE +P L+TPD Sbjct: 10 QIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVTPD 67 Query: 57 SPTQRV---------------------GAA----------PLAAFSQIRHEVPMLSLDNV 85 SPTQ V GAA F H M S+D+V Sbjct: 68 SPTQTVGGGAGGGGGVKRAAAATTEAVGAAHVPENAVAVATTEGFPPHTHAKRMQSIDDV 127 Query: 86 FDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 F A+ +RV+ L+ + T E+K+DGLA+S+ Y +G L++ ATRGDG GED+ Sbjct: 128 FSTAEVDAWWERVEKGLEG-KPFTVSAEVKVDGLAMSLTYVDGQLMTGATRGDGRVGEDV 186 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGG------------ 193 T+NVRTI+ +P L G IP +E+RGEV+LP F ++N + Sbjct: 187 TANVRTIKTVPQTLGGTVIPHLVEIRGEVYLPLEDFAQMNAEREANNAAWEAARAAGDKE 246 Query: 194 --------KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV----LEGGELPDTHLG 241 +FANPRNAA GSL+Q D AKRPL F +G+G +G T Sbjct: 247 KLKTLKKMPLFANPRNAATGSLKQKDSIEAAKRPLAFLAHGLGAVQGWPDGVSPMATQED 306 Query: 242 RLLQFKKWGLPVSDRVTL--------CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 Q + WG+P R + +V A + E R IDGVV+KV++ Sbjct: 307 FYRQLEVWGIPSVRRTPQSLGLRMAGLTTLTQVHAVLAAMTEHRHDFSHQIDGVVLKVDN 366 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 LA + LG ARAPRWA A+KFP +E T + +E QVGRTG +TP A +E V V G V Sbjct: 367 LAARVLLGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPFAVMERVLVDGSYV 426 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 S ATLHNA E+ R +R GD VV+R+AGD+IP+V+ VLS RP E V P CP CG+ Sbjct: 427 SRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEVLGPVLSLRPGGLPEWVMPEMCPSCGT 486 Query: 414 DV-ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE------ 466 + + EG+ RC C AQ E L H +R A+D++G+G++ L + E Sbjct: 487 RLGQEKEGDIDLRCPNQAGCPAQITERLIHVGARGALDIEGLGEEGALALTQPEAGRADV 546 Query: 467 -----------------------------------------YVHTPADLFKLTAGKLTG- 484 + + A LF L + L Sbjct: 547 AAALSAGGSCMLEDGTEIRVPAGKPLELGAIESLLPPTQEPVLRSEAGLFDLKSKDLRDV 606 Query: 485 -LERMGPKSAQNVVNAL----EKAKETTFAR-FLYALGIREVGEATAAGLAAYF------ 532 + R P +A + K K T A + L E+GE A F Sbjct: 607 FVWREVPGTAGRDWQQVRFFWAKPKRVTAAEAATFGLVAGELGEPVAGKTVETFFNQLAA 666 Query: 533 ----GTLEALEAASI--------------------------EELQKVPDVGIVVASHVHN 562 T L A SI E L +V VG V+A+ V + Sbjct: 667 ARSKETWRVLVALSIRHLGPVAARAVARRFPTLAAVAAADVEGLSQVEGVGAVIAASVVD 726 Query: 563 FFAEESNRNVISELLAEGVHW 583 +F ++ ++ G+ Sbjct: 727 WFRVPWHQEIVLAWTQAGLGL 747 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 51/78 (65%) Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 EE + AG T+V+TG++ +R+ A+ + + G K GSVSKKT +V+AG AGSKLAK Sbjct: 833 EEPEQTLAGLTLVITGNIPGFTRESAQLAVEDRGGKATGSVSKKTSVVVAGTGAGSKLAK 892 Query: 652 AQELGIEVIDEAEMLRLL 669 A+ LGI VI E LL Sbjct: 893 AEALGIPVIPAEEFPALL 910 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 218/692 (31%), Positives = 339/692 (48%), Gaps = 68/692 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ EL + + Y+ PEI DA +D L ELR L+ HP L S Sbjct: 24 KHKARIEELAERIEKYRASYYA-GHPEISDAAFDALEDELRALDPAHPVLARVGS----- 77 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN----------------- 105 A+ + + + RHE+PM SL+ V E+ L + R + L + Sbjct: 78 -ASLITEWEKARHEIPMGSLNKVVSEDELLGWVARCDEILVKDGHGDGGTGAAPPAPGSI 136 Query: 106 ---EKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 + E KLDG+++ ++Y+ G LV A TRGDG GE IT+NV ++ IP ++ Sbjct: 137 SSVAGDLFVAE-KLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIRE- 194 Query: 163 NIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTF 222 RL VRGE+ L + ++ +PRN AAG+ ++ D + + F Sbjct: 195 --KGRLSVRGEIILRLSDMKRHF--------PGVTSPRNMAAGAAKRFDGQGAEHCTVLF 244 Query: 223 FCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLG 281 + V + E+P T R ++ G T S E+V+ Y + E R L Sbjct: 245 Y----DVADHLEIP-TCRARFAWLRELGFATPQ--TAHGSVEDVVKLYRRYSSELRAGLD 297 Query: 282 FDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVA 341 ++IDG+V+ V+SL Q LG V R PR AVAFKF + ++T V +++ G +G +TPVA Sbjct: 298 YEIDGLVVYVDSLHVQGLLGDVNRRPRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVA 357 Query: 342 RLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE 401 +EPV +AG V A+LHN+ + LG+ +GD+V++ R DVIP V VV +R Sbjct: 358 IVEPVELAGANVRRASLHNSANVRSLGIGVGDEVLVSRRNDVIPYVEEVV-EKRGPVAVP 416 Query: 402 VVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQ 461 P+ CPVC + + VEGE + C C A + + +++ A+ GDK+I+Q Sbjct: 417 ---PSVCPVCSAPLV-VEGEYLL-CRNA-ACRALIEGRIHNWI--DAIGALEWGDKLIEQ 468 Query: 462 LVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVG 521 +V V P DL+KLT + L+R G KSA + L+ FL ALGI Sbjct: 469 VVAAGLVREPLDLYKLTVKSIADLDRRGEKSATKCLEQLKSRLPLALPVFLAALGIEGFA 528 Query: 522 EATAAGLAAY-FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 TA L + + T+E L AA +EL +P +G + A+ + S + I LLA G Sbjct: 529 IQTARLLVSAGYTTIEKLLAAGEDELAGIPGLGAIKAASIVRGLRARS--DEIGRLLAAG 586 Query: 581 VHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVI 640 IV A E + P AG T TG+ ++ R + + G +V SV+K+ + ++ Sbjct: 587 ------IVPVAPEAEGPLAGLTFCFTGAGAR-PRGELTHLVESSGGRVLNSVTKELNYLV 639 Query: 641 AGEAA--GSKLAKAQELGIEVIDEAEMLRLLG 670 + A SK KA++ G ++I E ++ +L+ Sbjct: 640 IADVASTSSKAVKARKYGTKLITEDDLDKLIA 671 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 206/777 (26%), Positives = 340/777 (43%), Gaps = 130/777 (16%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR + + LY+ EI D EYD+L + L LE K + + T +VGA Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKFNQ----QTITNQVGAPISDYS 126 Query: 71 S----QIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---------KNNEKVTWCCELKLD 117 + + RH+ MLSL N + ++ +AF +++ L + +++ + ELK D Sbjct: 127 NNRGLKFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKYD 186 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL--------- 168 G+ +S++YEN L TRG+G GEDIT+N IP + +P+ L Sbjct: 187 GIGISLVYENNKLKRVLTRGNGEIGEDITTNALQF--IPSLKNLLTLPSNLTVFILFLIL 244 Query: 169 -----EVRGEVFLPQAGFEKINE-DARRTGGKVFANPRNAAAGSLRQL---DPR------ 213 E+RGEV L ++ + IN+ + N RN +G LR+ D Sbjct: 245 KYKDFEIRGEVVLNKSYLKIINKLKLDNNDQHQYKNTRNIVSGILRKSIEEDANDSLNIE 304 Query: 214 ----ITAKRPLTFFCYGV---------------------------GVLEGGELPDTHLGR 242 + + FF Y ++ E +T Sbjct: 305 PILLLNEQMKFDFFPYFFIPTNNNNNNINNGENENENDNEKENDNEMIIDDERCNTQSKN 364 Query: 243 LLQFKKWGLPVSDRVTLC-----------ESAEEVLAFYHKVE-EDRPTLGFDIDGVVIK 290 L F+K G + + + + F + E + R +DIDG+VIK Sbjct: 365 LKLFEKMGFQIDNGSNTVVTLSTGGGGNNNDIKNIEEFIKEWELKKRENHNWDIDGIVIK 424 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VN + Q LG + R+PRWA A+KF A+ +++ ++D+ QVG++G ITPVA +EP+ V G Sbjct: 425 VNDINIQRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVEPIQVHG 484 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH--- 407 V +S ATL+N I +L ++IG KV+I RAGDVIP+++ + Sbjct: 485 VTISRATLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNTNNTNNI 544 Query: 408 -------------CPVCG--SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVD 452 CP C S++ G C C Q + + FV ++AM++ Sbjct: 545 ESLFKCNENGNILCP-CNLKSELVNRVGYVDYFCV-AENCPNQLVQQISWFVDKKAMNIQ 602 Query: 453 GMGDKIIDQLVEKEYVHTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFAR 510 G+G I L+E + + DL++L KL L+ N++ ++E +K A Sbjct: 603 GVGKSQIQVLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSRGLAS 662 Query: 511 FLYALGIREVGEATAAGLAAYFGTLEALEAA-SIEELQKVPDVGIVVASHVHNFFA--EE 567 L A+GI +G + + L+ F +L+ L + SIE ++ +G + + NFF ++ Sbjct: 663 LLCAIGIPGIGSSNSKILSEKFQSLDNLINSPSIESIELQSGLGRQTSESIFNFFNPLDQ 722 Query: 568 SNRNVISELLAEGVHWPAPIV-----------------INAEEIDSPFAGKTVVLTGSLS 610 + + L+ + + N E +S + K +V+TG Sbjct: 723 FEKQYLDYLIFKFKSNNLKLTHNNNNDNNEEIGNNNNNNNNENNNSFLSNKYIVITGKFK 782 Query: 611 QMSRDDAKARLV-ELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEM 665 RD K + + AKV S++ T +++ GE +KL KA ELGI++ E E+ Sbjct: 783 LGDRDFVKDFIQRKFNAKVQSSINSFTQILLIGEKPAIAKLNKANELGIQIKSENEL 839 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 200/687 (29%), Positives = 317/687 (46%), Gaps = 63/687 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++++ EL + HH+ Y+ +I D +D L EL L+ +P L S +Q Sbjct: 1 MSTAQRRVQELEKLILHHQDRYYN-AESDISDDAFDALWEELARLDPGNPLLKAIGSDSQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R + RH VPM S DEESF A+ K+ N + + KLDG++ Sbjct: 60 RDA-------VKKRHIVPMGSQHKAADEESFSAWAKK-------NALQAFLVQHKLDGVS 105 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE-----NIPARLEVRGEVF 175 + + YE G A TRG+G G+D+T+NVR +R L E N+P VRGEV Sbjct: 106 LELQYERGHFCCALTRGNGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVI 165 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-----GVL 230 + + D R+ AN RN G L++ D R + L CY G Sbjct: 166 MHK--------DIHRSHYPTHANCRNTVNGILKRKDGR--GRTHLHIVCYDAVPGTPGKP 215 Query: 231 EGGELP-DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 G LP +L + G V+ C +A+EV+A ++ R L + IDG+V+ Sbjct: 216 FTGSLPFADETEKLAWLARQGF-VTVHSHRCANAQEVVALRSEIMRTRELLPYSIDGLVV 274 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGA-ITPVARLEPVHV 348 K L Q+ P+ +AFKF QE +T +RDV++Q +G TP+ +PV + Sbjct: 275 KSTDLDFQD---AQLPRPKKQIAFKFSTQEAITTLRDVQWQT--SGVTYTPIGITDPVRL 329 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHC 408 AG V A L N + + +L L+IG V+I + G++IP++ +V + P +E+ PT C Sbjct: 330 AGTTVKRANLCNPNMLTKLCLKIGSHVLISKRGEIIPKIEALVST--PAHAQEIHIPTQC 387 Query: 409 PVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 C + +E C + C + ++ +++ +G ++I +L E++ V Sbjct: 388 TSCNTVLENSGSR--LFCPN-VNCPLLSHHRITRWI--ECLEIKHVGTELIQRLFEEKKV 442 Query: 469 HTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 DL+ LT L +E +G +A+ ++ A+ KE F+ GI +GE L Sbjct: 443 RRIPDLYTLTCEDLIEIEHVGNATAKKILEAIHHKKEIALQTFIAGFGIEGIGETMGEKL 502 Query: 529 -AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 A F TLE + A+ E L+ + G +A V A ++ + ELL G Sbjct: 503 ICAGFDTLEKVLHATTETLESIYQFGTELAKSVVTGIA--RVKDDMCELLDRGF----VR 556 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE---- 643 ++ ++ +SP GK+ +GSL R R+ LG V SV++ +I Sbjct: 557 ILAKQQAESPLRGKSFCFSGSLRNGDRATI-HRIRALGGVVRTSVTRDLSYLIFESLSQP 615 Query: 644 -AAGSKLAKAQELGIEVIDEAEMLRLL 669 KL K Q + +E+I E E RLL Sbjct: 616 YRTAQKLKKEQGVALEIISEDEFCRLL 642 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 + +L+A + + +P G + +G L M+R A A + LG V Sbjct: 723 ETLHKLIA----TAQSPLHTDAHVHAPLHGMSFCFSGDLDGMTRAQAIALVQRLGGTVKT 778 Query: 631 SVSKKTDLVIAGEAAG--SKLAKAQELGIEVIDEAEMLRL 668 +VS + +++ + G K A G+ +I E L L Sbjct: 779 AVSTQLTYLVSNDPHGQSRKCQNAVRCGVRIISEHVFLAL 818 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 196/663 (29%), Positives = 295/663 (44%), Gaps = 70/663 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 EL + +H Y PEIPDA YD L+R L++LE H EL+T RV A +A Sbjct: 14 DELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDH-ELVT------RVYAPAVA 66 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 ++RH PMLSLD + E L + K+ +E E K DG++ + +G Sbjct: 67 GSGKVRHLRPMLSLDKAYSLEEVLEWAKKFAR----SEDEELLVEPKYDGISANF---DG 119 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 + +TRGDG GE+IT + + L+ G VRGE+ + F+ + Sbjct: 120 RV--LSTRGDGELGENITDKL---PLVELETAGHTGKVDRPVRGELVIRDDDFKTLYSHI 174 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKK 248 R+ GG V+ N RNA AG + + + K Sbjct: 175 RKKGGGVYKNSRNAVAGIMGLKEIAEMELQG---------------------------AK 207 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 L + V+ E+ A + ++ L + DG+VIK+ A LG A PR Sbjct: 208 ITLVDYNLVSFRVKYSELAAKWEELRRQLEALPYPQDGIVIKLADSAYSASLGNTAHHPR 267 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 +AFKF + T + VE+ G+ +TPVA LEPV ++G + ATLHN I LG Sbjct: 268 GEIAFKFTNIRRETRLIGVEWSFGK-NCLTPVAELEPVEISGTTIRRATLHNIQNILELG 326 Query: 369 LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTG 428 ++IGD V + RAGDVIP +V S P + R CP CG+ + R E C Sbjct: 327 VQIGDTVTVERAGDVIPYIV----SSTPGEERRSPLIEDCPSCGAKLVRRGPE--LCCPN 380 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 C + + L + R + ++ +G+ + +L+E V DLF+LTA L L+ Sbjct: 381 PE-CPETQLQRLA--AAVRNLGIERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGF 437 Query: 489 GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQK 548 KSA N++ ++KA+ + L AL I +G A + ++ L S EEL Sbjct: 438 AAKSAANLIEEIQKARIVNDYQLLAALNIPNIGANVAKVIFSH-TDFAGLRRMSEEELSA 496 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGS 608 +P +G A + + A +S + ELL I A + P TV TG Sbjct: 497 IPGIGPERAKALVSELAAQS--EYLDELLGA----VRLIHAAAPAAEIP----TVCFTGK 546 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKAQELGIEVIDEAEML 666 + + R + G + A V+ L++A + A KL KA LG++V+ E L Sbjct: 547 MPE-KRSYYEKLATAHGYRSADDVTSSLSLLVAADPAENSGKLKKAARLGVKVVSLDEFL 605 Query: 667 RLL 669 +L Sbjct: 606 SML 608 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 186/681 (27%), Positives = 305/681 (44%), Gaps = 77/681 (11%) Query: 1 MESIEQQLTE------LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT 54 M+ + + + L L + Y P I DA YD L+ LRE+ H L Sbjct: 1 MQDLPSSIADISDPELLGQWLEKYNEAY-RAGKPMISDAHYDLLVERLREIAPDHGFLSA 59 Query: 55 PDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCC 112 V A A ++RH PMLS + +D++S F +RV V + Sbjct: 60 -------VEAETFADKREVRHPAPMLSTEKAYDKQSLERFVERVYKEAAQIGVTDVLFQV 112 Query: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 KLDGLA ++G + ATRG+G G DIT N IP G + G Sbjct: 113 TPKLDGLAAR---DDGQI--LATRGNGYAGYDIT-NALEKGVIPQGGRGLGL-------G 159 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E+ Q+ F++ D F +PRN G + I+AK+ L Sbjct: 160 EIVAVQSYFQENLADR-------FEHPRNMVVGIISSDVLNISAKQAL------------ 200 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR-PTLGFDIDGVVIKV 291 E H KW S +E+L K+ +D + +DG+V V Sbjct: 201 -EDKQVHFVPYATLNKW----------EGSGKELLENSEKITQDLIQATDYPMDGMVASV 249 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + ++ +G + RW +A K + +T V + +QVGRTG +TPV +EP+ ++G Sbjct: 250 MNQDVRDHMGATSHHYRWQIAIKAKGETGVTTVNAITWQVGRTGNVTPVLEVEPLKLSGA 309 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 + T HNA I G +G + + R+G+VIP++ NV+ + + + P +CPVC Sbjct: 310 TIRRVTAHNAGRIREKGAGVGASIEVIRSGEVIPKLENVLT-----PSDDTLIPENCPVC 364 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + +E +C L C A+ ++ ++H+ R + D G K +++LV + + Sbjct: 365 ETPLEWNND--FLKCPN-LNCKARVEQRIRHWF-RILGNADWFGIKTVERLVAGGF-DSL 419 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLA 529 ++ +T L GP ++N+ A+ +K RFL A GI ++GE + + Sbjct: 420 EKIYAMTEEDFLSL-EFGPVQSKNLAEAINLSKSRPVEDWRFLAAFGISDLGEGDSRKIL 478 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 ++F LE L + +++ + G V + + ++ I +L G + + Sbjct: 479 SFFP-LEELLDKTRDDIVALHGFGDVTSISIEKGL--KALGPTIRHMLDLGFNLQPTPLK 535 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-K 648 + ++ SP +GK VV TGS+ SR D + LGA V +V+ KTD +I G G+ K Sbjct: 536 SEMDVSSPISGKGVVFTGSMETGSRKDMEENARSLGANVQKAVTGKTDYLICGAKVGAKK 595 Query: 649 LAKAQELGIEVIDEAEMLRLL 669 KAQ+LG+ V+ E E L+L+ Sbjct: 596 TQKAQDLGVTVLTEQEYLQLV 616 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 188/672 (27%), Positives = 284/672 (42%), Gaps = 76/672 (11%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 L L Y AP + DAEYD L+ LR + HP L Q V P Sbjct: 2 SLVHKLEEANAAY-RAGAPIMSDAEYDALVERLRREQPDHPYL-------QTVEPEPENI 53 Query: 70 FS--QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLAVSILY 125 F ++RH PMLS + + E + + V + ++V + KLDGLA S Sbjct: 54 FGGAKVRHHAPMLSTEKAYTESDLIRYFSAVTRQAARLGMDEVIYAMTAKLDGLAGSRDR 113 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 +G V ATRG+G GEDI LK+ G ++ GE+ +P+ FE Sbjct: 114 AHG--VDLATRGNGLQGEDIGKAFARG----LKIVGADVDGP----GEIVMPKDFFE--- 160 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E G F +PRN + VG + D H Sbjct: 161 EHLVPLG---FKHPRN-----------------------FMVGFVGADTEKDHHRLVKES 194 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKV-EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +P ++ + +L + E+ R +D DG+VI+V + LG Sbjct: 195 GMAHFVPYANLPRFYADKDTILRDIAYISEDIRKNTPYDTDGIVIEVEEPELRAALGSTN 254 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 RW +A+K + T V V +Q GRTG ITPV ++PV ++G + AT HN + Sbjct: 255 HHHRWQIAYKTKGETAETTVTGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKA 314 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + GL +G +V + R+G+VIP +++V+ + PT CP C VE E Sbjct: 315 RKDGLGVGSRVTMIRSGEVIPFIMDVL------SPAPLDVPTACPCCNGPVE--EDGEYL 366 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C C AQ + ++ HF DG G K ++++V + + +T G Sbjct: 367 TCVNPH-CEAQAEGAISHFFKIMGT-ADGFGPKAVEKIVAAG-ITDILAVLDMTRADFEG 423 Query: 485 LERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + GP A+N+ +++ T RFL A GIR +G + L G L+AL + Sbjct: 424 M-GFGPGQAENLEREMKRCMSTPVEDWRFLAAFGIRYLGRGDSKALLCAIGGLDALNGIT 482 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID---SPFA 599 ++ + A + + E+ A AP+V +A D P A Sbjct: 483 PAQIMAIDGFAEKTALCIAHDLTWRWM-----EIEAVRDRMEAPLVSSAPAGDIGTLPLA 537 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIE 658 G ++V TG+ S+ R+ + + LGAKV V+ KT +++ GE G SK KA LG Sbjct: 538 GMSLVFTGTFSK-DREVMETQAEALGAKVQSGVNGKTSVLVIGEKPGASKTTKAAALGTP 596 Query: 659 VIDEAEMLRLLG 670 V EAE L +G Sbjct: 597 VWTEAEYLLRIG 608 >UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN Length = 649 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 171/659 (25%), Positives = 289/659 (43%), Gaps = 69/659 (10%) Query: 21 LYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPML 80 ++ I D+ YD + E HP L+T V LA + ML Sbjct: 51 AFYRSAEQIINDSTYDAFLSEFSTYNPDHPYLLT-------VEPEVLADSKTVPLPKKML 103 Query: 81 SLDNVFDEESFLAFNKRVQDRL----KNNEKVTWCCELKLDGLAVSILYENGVLVSAATR 136 S D + E + R+ + ++ KLDG A Y++G +S TR Sbjct: 104 STDKAYSFEEIKKWIDRLLKAAIEVGVSESEIQIKVTPKLDGYAA---YDDG--ISLYTR 158 Query: 137 GDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVF 196 GDG G+DIT RA L N R GE+ + ++ F+ + D F Sbjct: 159 GDGARGQDIT------RAFNKGLQVANNGDRGLGPGEIVIKKSYFDTVLSDK-------F 205 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDR 256 N RN A + + + ++ + L + W + Sbjct: 206 ENSRNIQAAIIAEKKVDESIQKAIDVGACVFFP-------------FLSLENW---IGHY 249 Query: 257 VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFP 316 + E ++ E+ + +DIDGVV++V + +E +G RW +AFK Sbjct: 250 TEILVDFESIV------EKMWSAVDYDIDGVVLEVTNETLKEHMGATRHHHRWQIAFKVN 303 Query: 317 AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVV 376 A+ V +V Q RTG +TPVA LEP ++G +S AT+H+ + ++ G+ G V Sbjct: 304 AESAEVKVLNVTPQTSRTGRVTPVAELEPTKLSGATISRATVHHYNMVKTNGVGPGAIVQ 363 Query: 377 IRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQR 436 + R+G VIP++ V+ + P+ +E CP CG+ + V C C AQ Sbjct: 364 LVRSGLVIPKIEKVIKAVEPQLAKE------CPSCGTHLIWESDHLV--CPNKTDCPAQT 415 Query: 437 KESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNV 496 + +L HF + DG G K+I++L E + ++++L G K+AQN+ Sbjct: 416 ENTLVHFFKTLGNN-DGFGPKVIEKLHEFG-IKKIHEIYELKQESFVS-FGFGDKTAQNL 472 Query: 497 VNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 V L+ +++ RFL A G+ + L + +L++L A++E+L ++ Sbjct: 473 VEQLQVSRDVEIEDWRFLAAFGVSRLAGGNCEKLLQHH-SLDSLFEATVEDLVQLDGFAQ 531 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAGKTVVLTGSLSQMS 613 V A + A + +L A + P ++P GK +V TG+++Q S Sbjct: 532 VSADAIVEGLAN--IKEEFLKLSALNFNLTITPKASEKSPGETPVFGKIIVFTGAMTQGS 589 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAEMLRLLGS 671 R D + + LGAKVA SV+ KT L++ G+ G+ K+ A++ G++V+ E + L L+ + Sbjct: 590 RGDMEKQAKALGAKVAKSVTGKTSLLVTGDKVGANKINAARDKGVQVLSELDYLALIST 648 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 194/679 (28%), Positives = 297/679 (43%), Gaps = 85/679 (12%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLM-RELRELETKHPELITPDSPTQRVGAAP 66 + EL T Y P +PDA YD L L E + +HP L + Sbjct: 30 VDELATACERLNASY-RAGQPLVPDAVYDHLFIATLSEKDPEHPFLKAVEPE-----GEA 83 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLAVS 122 ++H+ PMLS D + E+ F RV+ + +E +T+ KLDG+A Sbjct: 84 FEG-DTVKHDTPMLSTDKAYTEDELRRFLGRVEVAAEALGIRSETLTFRMTPKLDGIA-G 141 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + +G LV TRG+G G DI+ P G P GE+ L + F+ Sbjct: 142 MQRPDGRLV---TRGNGFAGADISHAFERGLRTP---DGSMEPGP----GELVLEEMFFQ 191 Query: 183 KINEDARRTGGKVFANPRNAAAG-----SLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 E G +PRN AG +++ + + + FF Y Sbjct: 192 D--EIRVAFGMP---HPRNFVAGFVGADTVKPHHQKAADAQAIIFFPY------------ 234 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFY-HKVEEDRPTLGFDIDGVVIKVNSLAQ 296 Q W SA V+A + ++E R + + DGVV++V Sbjct: 235 ------RQLPAWQ----------ASAAVVMASWQERMEALRQAVPYRTDGVVLEVTDETV 278 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 + +G + RW VA K + VRD+ Q GRTG ITPV +PV + G +SN Sbjct: 279 KAHMGSTSHHHRWRVALKTKGEVAHVRVRDIRIQTGRTGRITPVLEFDPVLLTGARISNV 338 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 T H A + + GL +G ++ I RAGDVIP++ V+ E E + THCP CG + E Sbjct: 339 TAHTAANLAQQGLGVGAEIEISRAGDVIPKLERVL-----EPASEPMTVTHCPSCGHEAE 393 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 VEGE A C + C AQ + L+HF + D G K ++ LVE + LF Sbjct: 394 -VEGE-YAVCPNTVGCLAQAEARLRHFFHVMG-NADLFGPKTVEVLVENGH-TDLRGLFD 449 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKE--TTFARFLYALGIREVGEATAAGLAAYFGT 534 L A + GP A N+V L + RFL ALG+R +G + L A + Sbjct: 450 LNAVAFVSM-GFGPGQASNLVRELARCLREAVPDWRFLAALGLRHLGRGDSRKLLAVYP- 507 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEE 593 LE++ + E++ V G + ++ + E+ R I ++ G + P+ Sbjct: 508 LESITNLTAEDIAAVEGFGPITSASIAEQLQEQ--RERIEAMIRLGFNLERTPLAGEGAA 565 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + P AG+++V TG+L+ SR + + + LGA + V+ KT +++ GE AGSK KA+ Sbjct: 566 AEGPLAGQSIVFTGTLTLGSRGELEEQARGLGATIQSGVNSKTTILVCGEKAGSKRKKAE 625 Query: 654 ELG-------IEVIDEAEM 665 + + ++DEA Sbjct: 626 AINEKAGKEQVRILDEAAW 644 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 197/675 (29%), Positives = 303/675 (44%), Gaps = 66/675 (9%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR---V 62 +++ L L +H +LY V + EI D YD L +EL EL ++PE+ R + Sbjct: 8 ERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDFYNRPVPI 67 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 +R E PMLSL E F LK + + E KLDGLA+ Sbjct: 68 HEPSGETIQPVRFEEPMLSLKKALSVEEADTFL------LKFPDGTNFFYEEKLDGLALE 121 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNV---------RTIRAIPLKLHGENIPARLEVRGE 173 ++YE G LVS +TRG G GED+T ++ RT+R +P + + RL +RGE Sbjct: 122 LVYEQGQLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQG--DRLVIRGE 179 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQL--DPRITAKRPLTFFCYGVGVLE 231 ++ F+ +NE TGGK +NPRNA +G +R L + R + L F Y Sbjct: 180 GYISLERFDSLNE----TGGKR-SNPRNAVSGWVRSLPQNQREDIRGTLYFAAY---YAS 231 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 + G V + S + + ++ RP +DG+VIKV Sbjct: 232 DRLGTKAYSELRQVLLGLGFGVPE------SRDWIAVSENRRGNIRP-----VDGIVIKV 280 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + +Q+ G ++ P WA+A+KFPA+E + V + R G + PV + PV + GV Sbjct: 281 DKFKEQDASGNGSKFPHWAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVTIQGV 340 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 + +A+L N LGL IGD++VI R DVIP++ V E + + PT CP C Sbjct: 341 ICQSASLDNYGSFMDLGLSIGDRIVITRNNDVIPRLNRV---EECGEGDLLEAPTSCPSC 397 Query: 412 GSDVERVEG--EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 S +E V G + C C AQ + +DVDG+G + +LVEK +V Sbjct: 398 DSLLEVVVGRDSSELVCNNVAECPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEKGWVK 457 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 PAD+ L G + + P + + + L++ RFL ALGI ++G A LA Sbjct: 458 QPADILTLPEG--IKDQCLTPTTRRGLERVLQEP--VPLHRFLKALGIPDIGITLAKRLA 513 Query: 530 AYFGT---LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 E+L LQ V V + +A V N F ++ L Sbjct: 514 NAIPEGKIEESLTNPKF--LQSVRGVSVGIAYRVVNAFDSPVFKDNFHALK--------- 562 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 ++ + + V +TG++ SR + + G +++ +++ VI G+ G Sbjct: 563 GLLTLQYTGTQDDCIKVCITGNI-GPSRGELCNLFAKEGIELSDRLTQDCAFVIVGDRPG 621 Query: 647 -SKLAKAQELGIEVI 660 SKL A E GI ++ Sbjct: 622 KSKLLIATESGIPML 636 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 170/669 (25%), Positives = 273/669 (40%), Gaps = 70/669 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 EL L+ LY P I D YD + HP + + V L Sbjct: 41 DELLALLKVTNALY-RSGFPVIEDILYDSFWNKFALNHPNHPFITS-------VETEVLN 92 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE----KVTWCCELKLDGLAVSIL 124 + MLS D + +E + R+ + + ++ KLDG A Sbjct: 93 LGKTVALPQKMLSTDKAYSKEEIKKWLDRILKAAEELDIDTNEIEIRITPKLDGYAA--- 149 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 +++G TRGDG G+D++ RA L R GE+ + +A FEK Sbjct: 150 FDDGE--RLYTRGDGVKGQDVS------RAFERGLKVVRNSERGLGAGEIVINKAYFEK- 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 + F N RN A + + + +R L G V Sbjct: 201 ------KLSQYFENSRNIQAAIIAEKN---VDERVLEAIKEGACV----------FHPFA 241 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 W D +T + +E+ ++ +D+DGV+++ +E +G Sbjct: 242 VLPNWTGNYQDLMTDFDGI---------IEQVWNSVEYDVDGVILEATDTRIKEHMGANR 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + RW +AFK + V V Q RTG +TPVA L P ++G ++S T+H+ + + Sbjct: 293 KFHRWQIAFKINDEVAEVEVISVTPQTSRTGRVTPVAELVPTRISGAMISRVTVHHYNMV 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + G+ G V I R+G VIP++ V+ P P CP C S + V Sbjct: 353 KINGVGPGAIVQIVRSGLVIPKIEKVIKPVDP------QMPELCPSCKSHLLWESDHLV- 405 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C C AQ + +L HF A + DG G K I++L V ++ L + Sbjct: 406 -CPNKSDCPAQTENTLVHFFKTLANN-DGFGPKNIEKLANLG-VKHIHQMYDLKPHQF-A 461 Query: 485 LERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + G K+++N+ + L+ +K RFL A G+ +G L ++ +L L A+ Sbjct: 462 MYGFGEKTSKNLYDQLQASKNIEIEDWRFLSAFGVSRLGGGNCEKLLQHY-SLRELFEAT 520 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAGK 601 +E++ ++ V A + A + ++ G + P E + SP GK Sbjct: 521 VEDIAELNGFARVSAEAIVKGLAN--IKEEFFKVYDLGFNLSITPKQSELESLASPLTGK 578 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVI 660 VV TG + Q R D + LGAKV SV+ T +IAG G +K+ A+E G++V+ Sbjct: 579 IVVFTGKMLQGKRSDMEKHAKALGAKVGTSVTSNTTYLIAGLKVGETKINDAKEKGVKVL 638 Query: 661 DEAEMLRLL 669 E E L L+ Sbjct: 639 SEQEYLDLI 647 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 143/580 (24%), Positives = 244/580 (42%), Gaps = 53/580 (9%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 +++ LR L + +Y+ I D YD+L +L + P Q V Sbjct: 35 ASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCF----QP----QNVI 86 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 A L + H V L + D + + + +D + K+DG+AV++ Sbjct: 87 PARLPDNGKQPHPVAHTGLKKLSDRVQLVQWIVQRED---------LWVQPKVDGVAVTL 137 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y++G LVSA +RG+G GED T R I IP L G P+ ++GE+FL + Sbjct: 138 VYQHGKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGA--PSSFVLQGELFLKMTDHRQ 195 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 GG N R+ AG +R+ P + G+ V E + P RL Sbjct: 196 Y-----AQGG---VNARSIVAGEMRRHQPSPVLSQ------IGLFVWEWPDGPKAMPERL 241 Query: 244 LQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + K+ G +D ES +V + L F DGVVI+ Q + Sbjct: 242 DKLKEMGFAMTADYTHAIESFADVEKWRDHWYH--SPLPFVTDGVVIRQTKEPQGRY--W 297 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + WA+A+K+P Q+ V DV F VGRTG + V ++ P+ + VS + + Sbjct: 298 RNTSADWAIAWKYPPVHQVAEVVDVAFSVGRTGKVAVVLKISPLKLDDKSVSRVNVGSLS 357 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 ++ + GD+V + AG IP++ NVV R + +V P A Sbjct: 358 RWKQWDVLPGDRVSVSLAGQGIPRLDNVVW--RGTERPVIVSPDEHNF----------HA 405 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 + ++C Q L +++ GM D + +L++ + + LT +L Sbjct: 406 FSCFRYSVVCQQQFLARLVWLSGEHGLNLAGMRDGMWLRLMQHDLLGDVLSWLYLTEAQL 465 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + MG K A+++ +L+ A++ + + +L ALGI V + + L AL+ + Sbjct: 466 NAVNGMGDKRARDIYMSLQSARQKSLSHWLLALGIP-VPRSAISALNNV--NWLALQQRT 522 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 ++ ++ +G A + F +I+ L EG+H Sbjct: 523 AQQWRQFSGIGERRAEEIMAFLNHPIVMELIARLDLEGIH 562 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 141/579 (24%), Positives = 250/579 (43%), Gaps = 53/579 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++++ LR L + +Y+ + D YD+L +L + P S V + Sbjct: 35 KKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQLREQLNQWLGCF----QPQS----VAS 86 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L + H V L + D E + + + +D + K+DG+AV+++ Sbjct: 87 VRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQRED---------VWIQPKIDGVAVTLV 137 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y++G L SA +RG+G GED T VR I IP L N+P+ L ++GE+FL K+ Sbjct: 138 YQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLLT--NVPSLLVLQGELFL------KM 189 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 + + G V N R+ AG +R+ P + G+ + E + P T RL Sbjct: 190 TDHRQHIQGGV--NARSVVAGEMRRHQPSPVLSQ------IGLFIWEWPDGPKTMPERLE 241 Query: 245 QFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + + G +D S + ++H L F DGVV++ Q + Sbjct: 242 KLTEMGFAMTADYTHAIGSFADAEKWHHYWYH--NPLPFVTDGVVLRQTKEPQGRY--WR 297 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 + WA+A+K+P Q+ V DV F VGRTG + V +L + + VS + + Sbjct: 298 NTSADWAIAWKYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLSR 357 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 ++ + GD+V + AG IP++ NVV R + +V P+ + A Sbjct: 358 WKQWDVLPGDRVSVSLAGQGIPRLDNVVW--RSTERLPIVSPSEH----------DFHAF 405 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 + +C Q L +++ G+ D + +L++ + LT +L Sbjct: 406 SCFRYSTVCQQQFLARLVWLSGEHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQLN 465 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 + MG K A+++ +L+ A++ +R+L ALG+ A +A AL+ + Sbjct: 466 AVTGMGDKRARDIYKSLQSARQMPLSRWLLALGLPVPRSAISAL---NHVNWLALQQWTA 522 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 ++ ++ +G A + F + I+ L AEG+H Sbjct: 523 QQWRQFSGIGERRAEEIMAFLKHPAVVEFIARLDAEGIH 561 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 137/581 (23%), Positives = 241/581 (41%), Gaps = 58/581 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ ++T L+ L + Y+ I D YD L ++L+ L + L + P+ Sbjct: 33 ERLQLEITALKNQLERWDVAYYQQGDSLIEDQVYDSLRQKLQ-LWHRCAGLERVEEPSSL 91 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 + A + H V L + D + + + + + K+DG+A+ Sbjct: 92 LPA------GKTPHPVAHTGLHKLADPAAVDQWLR---------GRSDVWVQPKVDGVAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RG+G GE+ VR I AIP ++ PA L ++GE+FL Sbjct: 137 TLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIP--AAVKDAPATLILQGELFL----- 189 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N ++ G + N R+ AG+L + ++ G+ V + P Sbjct: 190 -MVNGHQQKIHGGI--NARSTVAGALMKNRLSPVLQQ------IGLFVWAWPDGPKEMTQ 240 Query: 242 RLLQFKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL Q G P++ + S ++V + + R L F DGVVI Q Sbjct: 241 RLQQLAAMGFPLALAYSQPVSSLDDVRQWRERWY--REALPFVTDGVVIHQARSPQGRY- 297 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A+ WAVA+K+P +Q+ V DVEF VGRTG I V +L+P+ + VS L + Sbjct: 298 -WQAKPGDWAVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNLGS 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERV 418 + + GD+V I G+ IP++ V ER E + H C + + Sbjct: 357 LPRWRQWAVVPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLPE- 415 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 C Q L + + + G+ + L+++ V D LT Sbjct: 416 -------------CRQQFLARLVWLGGPQGLGLHGVSESTWQVLIDQGLVRHLLDWLVLT 462 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L +G K +++ + A++ FAR+L ALG+ + + + Sbjct: 463 PEQLMSAPGIGDKRGRSIHRQFQLARQQPFARWLIALGVPL-----SLQQTQALKSWHQI 517 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 + E +K+ +G A + F ++S L A+ Sbjct: 518 RQLPVGEWRKMTGIGAKKAEQITGFLQHPPFLTLVSTLEAQ 558 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 144/576 (25%), Positives = 233/576 (40%), Gaps = 46/576 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++ L + + Y+ + D YD R L P L P T Sbjct: 52 EAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYDSAKRRLAHWAECFPLLAKPSVNTHE 111 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 A H V + + D ++ + R + K+DG+AV Sbjct: 112 PTGA-------KHHPVAQTGIAKLPDRDAVAGWVAR-------QGDHPLWVQPKVDGVAV 157 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RGDG +G+D + I AIP L + P + ++GE++ Sbjct: 158 TLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLVI-LQGELY------ 210 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + + G A R AG + + +T + T G+ V PDT Sbjct: 211 ARRTAHRQSRDGTDGARAR--IAGLMARD--TLTDREGSTI---GLFVWAWPNGPDTMPE 263 Query: 242 RLLQFKKWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL WG V++ +AE++ A+ + R L F DGVV+K Sbjct: 264 RLETLAGWGFGDVAEMTHGVATAEDIAAWRQRWY--RHALPFATDGVVVKRGDRPPGSD- 320 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A P WA+A+K+PA+E + V +EF VGRTG I VA LEPV + V+ +L + Sbjct: 321 -WQASPPDWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSLGS 379 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 R +R GD+V +R AG IPQ+ VV+ RP + + ++ + Sbjct: 380 LAHWRRTDVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQVDAP----------EADQYDR 429 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + R T C Q L+ S +D G+G +QLV+ V D L Sbjct: 430 LSCLRFTP--ACRDQFLARLEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLDTA 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L +G K+A+ A + R+L ALG+ V +G + L Sbjct: 488 ALEALPGVGKKTARAWQRHFALADTRSAVRWLRALGVPAVPRQALTDALERYG-MAGLGT 546 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 + + + +G A + FF + R+ ++ L Sbjct: 547 LAPPDWRDYSGIGETRAMQLTRFFRDTDIRHWLASL 582 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 130/576 (22%), Positives = 239/576 (41%), Gaps = 56/576 (9%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + +++ L+ L + Y+ IPD +YD L +LR+ + SP + Sbjct: 27 ADAEISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGKLRQWQRCF-------SPASDLR 79 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L ++ H V + + + D+ + + R + + K+DG+AVS+ Sbjct: 80 KPLLKTDGKVLHPVSHMRVKKLPDKTALTRWMAR---------RSGLWVQPKIDGVAVSL 130 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 LY +G L +RGDG GED T R I IP + +GE++L K Sbjct: 131 LYRDGQLEQMISRGDGVRGEDWTEKARLIPDIPKFIPHSMRVQVF--QGELYL------K 182 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 + + + G N R+A AG+L P ++ G V E + P + RL Sbjct: 183 MTDHRQAINGG--KNARSAVAGALMAKAPAPLLQQ------IGFFVWEWPDGPTSLAQRL 234 Query: 244 LQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + G P +S ++ +EV ++ + L F DG+V V+S+ + + Sbjct: 235 TETRSLGFPDISAWTHRVDNVDEVESWRERWFHQ--PLPFVTDGIV--VHSIPTRRGSDW 290 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + W +A+K+ E VR VEF +GRTG + V L PV + +S ++ + + Sbjct: 291 LPEFGEWVIAWKYAPPEATAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGSIE 350 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVERVEG 420 ++ + GD+V I AG P++ V+ +ER + + C + Sbjct: 351 NWKQTDVIAGDQVSISLAGLGAPRLDKVLWRVAERAYPPQPDAAQFNSVSCFHLTPQ--- 407 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C Q L+ + +++ G G + QL++ + LT Sbjct: 408 -----------CRQQFLARLEWLGGKSVLNLVGTGRQTWQQLIQSGSMVHIFSWLALTKE 456 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L + +G + AQ + +++ F R++ ALG+ + E L + L + Sbjct: 457 QLEAVPGIGEQRAQLFWQQFKLSRQLPFKRWVKALGVP-IPEKALNTLTD--DNWQPLVS 513 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 ++E Q++P VG +A + +F + R +I L Sbjct: 514 RRLQEWQQLPGVGRKLAGKIVSFLQQREVRQLIEGL 549 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 143/584 (24%), Positives = 246/584 (42%), Gaps = 59/584 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ +LR TL + + YH + D YD+ L L+ + T SP Sbjct: 29 KQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFGQEFTDPSP--- 85 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +A I H V ++ + D + + K + K+DG+AV Sbjct: 86 ----LASARGPIAHPVAHTGVEKLHDAAAVARWM---------TGKKGVWVQPKVDGVAV 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y G LV +RGDG G D + +++ + +I +L P + ++GE++L Sbjct: 133 SLVYRQGRLVQLLSRGDGLQGHDWSRHIKDLDSITRQLPQ---PLDVVLQGELYL----- 184 Query: 182 EKINEDARRTGGKVFANPRNAAAGSL--RQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 ++ + G +N R AG L +QL P A G+ V + PD Sbjct: 185 -RLQAHVQAEAGS--SNVRGTVAGMLARKQLGPEPGAS-------IGLFVWDWPHGPDNQ 234 Query: 240 LGRLLQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL Q WG P S R T ++ EE + R L F DGV+++ +S + Sbjct: 235 GERLTQLAAWGFPDSQRFSTAIDTPEEATHWRLHWY--RSPLPFATDGVILRQDSRPPAD 292 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + + AP W A+K+P + + VR+V F +GRTG +TP+ RL+PV + +S +L Sbjct: 293 R--WQPNAPYWIAAWKYPFAQALAEVREVRFLIGRTGKVTPLLRLKPVTLDDRRISQVSL 350 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 + L +R GD+V I AG IP+ VV R + + + P + E+ Sbjct: 351 GSLARWRALDIRPGDQVAISLAGLTIPRFDQVV--HRAVERQVLPVP--------EAEQY 400 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + + + G C Q L ++ + + G G +LV+ V + D L Sbjct: 401 GQHSCWQASDG--CQEQFIARLVWLSGKQGLAMPGTGKGTWKRLVQAGLVTSLTDWLTLD 458 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 A +L + + K+A + + + + FA++ LG+ A + L Sbjct: 459 AQQLLSVPGISRKTATQLQRSFDIGRNRPFAQWRKGLGVP------APAQVPRDENWQTL 512 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 S + Q +P +G A+ + NFF E + + + L G+ Sbjct: 513 AGRSASDWQTLPGIGATRATQLANFFTHEQVQRIATLLGTRGID 556 >UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPT5_9BACT Length = 647 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 176/678 (25%), Positives = 286/678 (42%), Gaps = 76/678 (11%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L+ L LY + DAEYD L+ ++ + + + +VG Sbjct: 3 IDALKAKLDQANQLYRTGGESPLSDAEYDYLLEQVNDQKFR-----------DKVGYEIE 51 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 +++ VPM SL+ + + ++K L C K DGL++ + + + Sbjct: 52 K--NKVELAVPMGSLNKIKTQAEVFDWSKSKSIPL----DTEICVTPKYDGLSLLVYFVD 105 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G+ A TRGDG G+D+ + L+L + + GE + +A F+ + Sbjct: 106 GIYKGAYTRGDGMFGQDVGEHFTVNPLCDLRLPQDFTGYLI---GECIMDEAKFQTKYSE 162 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF- 246 F NPRN AG L + T R L CY + ++ H ++F Sbjct: 163 K-------FKNPRNMVAGLLSRK----TLSRELADVCYVAYGVRSAQM--AHKQDQVEFC 209 Query: 247 -----KKWGLPV-SDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +W V L + + L + E F DG+V+++N Q+ Sbjct: 210 NRYINAQWKYKVLCPLYKLEDLKDAELQKVYDSETR-----FQCDGLVLEINDSDLFHQI 264 Query: 301 GFVARA--PRWAVAFKFPAQEQM-TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 G + P A A+K + + + + V++V +Q+ + GA PV R+EP+ +AGV +SN T Sbjct: 265 GKETNSLNPGAARAWKPESDDSLPSIVKEVVWQISKNGAAKPVIRIEPIDLAGVTISNVT 324 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 NA IE G+ G V I R+GDVIP+V+ V P V P CP C S++ Sbjct: 325 GINARFIEDSGIAKGATVTIIRSGDVIPKVIGV-----PNAIENVDLPKQCPSCESELVW 379 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 E C L C A K +L F S + D +G+ II L + Y + +L L Sbjct: 380 NENRVDIVCENKL-CPATNKAALIDFFST--LKADEVGEGIITSLWDAGY-QSVKNLLNL 435 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKA-KETTFARFLYALGI-REVGEATAAGLAAYFGTL 535 T L LE + A+ V+++++ + + R +A + + +GE L Y Sbjct: 436 TMEDLLKLEGFKQRKAKKVLDSIKISVVDVPLPRLQHASNLFKGLGEKKLELLQKYD--- 492 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +A S EEL +V + A + + E AE V+ E Sbjct: 493 QAGIKPSFEELLEVDGYSEISAKSYLDSI------DAYWEFAAELPGLKYKKVLVNE--G 544 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA--AGSKLAKAQ 653 FAG+T+V TG S + + ++ G K+ SVSKKT +++ SK KA Sbjct: 545 GMFAGQTLVFTGFRSP----ELEEQVKTEGGKIGSSVSKKTSVLVVKAKGSGSSKEKKAI 600 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LG+EV ++ L S Sbjct: 601 DLGVEVWGRDDLENKLNS 618 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 144/657 (21%), Positives = 272/657 (41%), Gaps = 72/657 (10%) Query: 23 HVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF--SQIRHEVPML 80 + P I + +YD + L L+ K P ++P + AF ++ ML Sbjct: 36 YRSGKPIISNEDYDFIY--LATLKNKEP-----NNPLFKSIEPEGRAFAEEKVLLPELML 88 Query: 81 SLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLAVSILYENGVLVSAATR 136 S+D + + +R++ + + KLDG A +++G TR Sbjct: 89 SIDKAYSWNEMSKWIERLEKSGMLIGLDLNAIQIKATPKLDGFAG---FDDGN--RLYTR 143 Query: 137 GDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVF 196 GDG G DI+ + + K G + A GE+ + ++ FEK + F Sbjct: 144 GDGKKGSDISRVFKRGLCV-FKDSGRGLGA-----GEIVVKKSYFEKYLVHS-------F 190 Query: 197 ANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDR 256 PRN + +++ A++ + + F K + Sbjct: 191 EYPRNFQSSLIKEKALDEQAQKAII----------------DKGALFVPFIKLPIWSGSM 234 Query: 257 VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFP 316 L EE+++ + + FD+DGVV +V ++ + Q+G + RW +AFK Sbjct: 235 TELVAKFEEIVS------QVLVMVDFDVDGVVFEVINIDLKTQMGANRKFHRWQIAFKEN 288 Query: 317 AQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVV 376 V +V QVGR+G ITPVA +EP ++G + T H+ ++ GL IG V Sbjct: 289 KDIVQVKVLNVMPQVGRSGKITPVAEVEPTLLSGATIVRVTGHHYGLVKEQGLGIGSVVE 348 Query: 377 IRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQR 436 + R+G VIP++++V+ V P +C CG + C C AQ Sbjct: 349 LTRSGLVIPKIISVLKP------MPVDIPDNCLSCGMPLVWESD--FLVCVNHKNCPAQI 400 Query: 437 KESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNV 496 + +F A + DG G +++L + + + ++ L +L + G K++ N+ Sbjct: 401 IGRITYFFKVLANN-DGFGIATVEKLYAHN-IRSVSQIYTLNVERLMAI-GFGEKTSINL 457 Query: 497 VNALEK--AKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 ++ L + +++ RFL A G+ +G L + L + ++E++ + Sbjct: 458 ISQLSRSISEKIEDWRFLAAFGMHRMGLGNCENLLKSYR-LNDIFDLTLEQITNIDGFAE 516 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA-EEIDSPFAGKTVVLTGSLSQMS 613 + A + S + +++ + + + + K +V TG + Sbjct: 517 LTAQVIVQGLV--SIVDEYNQIYQYNFNLDTTVFTKDLQTLMHELFDKRIVFTGKM-NCP 573 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 R++ K +G KV+ ++S K D ++ G G K+ A++LG+ V+ EA+ L + Sbjct: 574 RNEMKKHAKLVGIKVSTTISTKIDYLVIGSRVGQKKIQNAEKLGVVVMTEADYLSKI 630 >UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM64_9BACE Length = 652 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 163/692 (23%), Positives = 292/692 (42%), Gaps = 83/692 (11%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L ++ H +Y M APEI DAEYD + L+ L+ + E P A ++ Sbjct: 13 LLDMIKRHNKMY-RMGAPEISDAEYDAEIELLKTLDPDN-EWFKHTEP------AFVSET 64 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 + +PM SL+ V D + + LK N V C KLDGL+ +LY N + Sbjct: 65 RKRALPIPMKSLNKVKDISELKKWYMSL--GLKGNAGV--VCMPKLDGLS--LLY-NELT 117 Query: 131 VSAATRGD-GTTGEDITSNVRTIRAIPLKLHGENIPARLEVR-GEVFLPQAGFEKINE-D 187 A +RG G+D T++ + N + GE + ++ +E+ Sbjct: 118 GEAYSRGGIENEGQDCTNHYQA------STQCYNPASSFHYTFGEFVINRSDWEQHFHGK 171 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL------G 241 + G +F +PRN AAG L + +P + +FF YGV + + H Sbjct: 172 RSKFTGDIFKSPRNTAAGLLNRDEPCDYLEHA-SFFRYGVDESSLHDYNNFHSLIETICN 230 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 Q + D + + E ++ + + + + IDG+VI V+ L E +G Sbjct: 231 IYQQEHLYHFAFIDEL----NEELLMNLFKEWSKI-----YPIDGIVIYVDDLRLWEVIG 281 Query: 302 F--VARAPRWAVAFKFPA--QEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + P +A+A+K P + T V+ + ++V ++GA+ PV +E V + N T Sbjct: 282 RHQTSGNPLYAIAYKHPDFTESFETTVKGIVWKVSKSGALKPVVNIEMVDTGDCNMENPT 341 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT--HCPVCGSDV 415 +NA I + G ++++ R+G VIP++++ LS ++ +E ++ CP CGS Sbjct: 342 GYNAGWINDHEIAKGAEILVTRSGGVIPKILS-TLSPATQEEQEKLWDEMSECPHCGSST 400 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 E CT C + + F + MG++ + ++ + PA + Sbjct: 401 MWNENHIELCCTNP-SCPGVQLAKIIFFYLTCG--AENMGEETLSKIFNAGFTSIPA-IL 456 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +T L +E G S N++ LE ++ ++ V AT + F + Sbjct: 457 NVTFNDLIKIEGFGD-SISNII--LENNRKI----------MQGVDLATLMQASDCFKGI 503 Query: 536 EALEAASIEELQKVPDVGIV------VASHVHNFFAEE-SNRNVISELLAEGVHWPAPIV 588 ++A I L ++ D + +H + +E+ N + + L G +P Sbjct: 504 GKIKAQKI--LDEMDDEDLCSFCQGWYINHEPDVQSEDFKNCPITVQNLLLGY-FPFMAF 560 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMS------RD-DAKARLVELGAKVAGSVSKKTDLVIA 641 + +I + KT VL G +S RD + + + G K+ VSKKT ++ Sbjct: 561 LEETKIPYKLSPKTAVLEGKCKGLSICVSGFRDSNLEEVITNEGGKIVSGVSKKTTHLVV 620 Query: 642 GEAA--GSKLAKAQELGIEVIDEAEMLRLLGS 671 + + SK++KA+ LGI ++ E + Sbjct: 621 KDKSANSSKISKAKLLGIPILSIEEFCDFFNN 652 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 140/370 (37%), Positives = 204/370 (55%), Gaps = 20/370 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++ LR + + Y YH + P I D+ YD L+REL++LE+K P + +S T +V Sbjct: 315 DILDRVETLRRVIADYSYQYHTLGNPLISDSAYDALVRELKDLESKLPAEASEESVTAKV 374 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL------KNNEKVTWCCELKL 116 GA P +++RH VPMLSL V+ E+ A+++R+Q RL + W E K+ Sbjct: 375 GAPPPLEIAKVRHAVPMLSLAAVYKEDELKAWHERLQQRLNRMSNGEQPSTGAWVVEPKV 434 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN-----IPARLEVR 171 DG+A+++LYE G LV AATRGDG GED+T N R ++ +P L + + LEVR Sbjct: 435 DGIALTLLYERGKLVCAATRGDGAEGEDVTHNARNLKGVPEVLSDHHKEINLQESVLEVR 494 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV++ F+++N+ + G K FANPRNA AGS+R L R R L+F Y + E Sbjct: 495 GEVYMTLLDFQELNDMKVKGGEKPFANPRNATAGSMRILKNRDGDDRRLSFMAYAILSPE 554 Query: 232 G---------GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 L L K+ V+D S ++ L + + + R TL + Sbjct: 555 DNVSAGVETPPRLVRAQWDALNLLKQLDFSVNDDNRKFASFDDALHYATRWRDSRSTLKY 614 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 + DGVV K+N LA Q +LG V PRWAVA+KF A E +T + +E +GR+GAI P AR Sbjct: 615 ESDGVVFKINDLATQAKLGVVGSDPRWAVAWKFAATEVVTILEGIELSIGRSGAIIPNAR 674 Query: 343 LEPVHVAGVL 352 L+ + V+ Sbjct: 675 LKDITVSSSS 684 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 35/317 (11%) Query: 386 QVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVS 445 QVV V+ R + V P CP C ++ + + C C + +KHF Sbjct: 830 QVVQVLRELRSDHMHSWVPPDRCPFCNGELTVSKDNNITSCCNN-KCPGRHSRKIKHFAK 888 Query: 446 RRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKE 505 G+G I+ L E V PAD + L L+ L+ +G KSA +V A+E++K Sbjct: 889 TL---FKGLGPSILSDLEEAGMVVDPADFYALDVVSLSRLDGLGEKSAAKLVKAIEESKG 945 Query: 506 TTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFA 565 + ALGI VG A L +FG++E L AS EEL VP +G V AS +H++ Sbjct: 946 KALWELITALGIPSVGVTAAKLLEQWFGSMERLLVASREELLLVPGIGTVSASAIHDWCT 1005 Query: 566 EESNRNVISELLAEGVH--WPAPIVINAEEIDS--------------------------- 596 + N ++S + G + P + N ++ Sbjct: 1006 DPFNVQLVSSIKEAGFSPTFNDPEIENHAAGNALSDSASQTTTSKVRTTDSEESKGNVET 1065 Query: 597 -PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQE 654 GK VV+TG + SR+ + +V G ++ SV+ KT ++AG++ G SK+ KA + Sbjct: 1066 PRLQGKNVVVTGEFEEYSREQIEQLVVLNGGQLRKSVNSKTSFIVAGQSPGPSKMTKAAQ 1125 Query: 655 LGIEVIDEAEMLRLLGS 671 L + V+D + +LL + Sbjct: 1126 LAVPVLDISSFQQLLEN 1142 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 135/571 (23%), Positives = 226/571 (39%), Gaps = 57/571 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 Q+ + L + + Y A + D YD+L L + P D Sbjct: 36 RQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPEDDDLPPPTG 95 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 RH V + + DE+S + K K + K+DG+AV+++ Sbjct: 96 DA-------RHPVAHTGVRKLADEDSVARWMK---------NKSDLWIQPKVDGVAVTLV 139 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV A +RGDG GE T+ R I A+ + GE + L +GE+FL + G + Sbjct: 140 YRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVL--QGELFLRRDGHVQ- 196 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 ++TGG N R AG + + D + V + + P R Sbjct: 197 ----QQTGG---MNARAKVAGLMMRADAAAALSQL------DVFIWAWPDGPSDMRRRQQ 243 Query: 245 QFKKWGLPVSDRVTLCES-AEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + G S + T S E+V + + R L F DGV+++ +E G V Sbjct: 244 LLAQAGFKYSGQYTHPVSRIEQVAQWRQRWY--RSPLPFVSDGVIVR----EGREPPGRV 297 Query: 304 ARAPR--WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + W A+K+P ++ VR + F +GR+G + VA LEP + V + + Sbjct: 298 WSPGKGEWLAAWKYPPASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVGSV 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + L + +GD++ I AG IP+V VV T E PT P Sbjct: 358 SRWQMLDIGVGDQLQISLAGQGIPRVDAVVWR-----TAERHKPTPPPAKF--------N 404 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C Q L S+ A++VDG+G+ + + ++ + LT + Sbjct: 405 ALTCYFATPECSEQFLSRLIWLSSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTVEQ 464 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L + + Q++ + + ++ F R++ A+GI V + A L + L A Sbjct: 465 LQAVPGISAARGQHLWHQFDLVRKRPFIRWVLAMGIP-VPQGALAQLESE--NWHLLAAK 521 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNV 572 S + + +P VG + A + F + Sbjct: 522 SEAQWRTLPGVGEIRARQLVAFLHHPDVVAL 552 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 145/586 (24%), Positives = 228/586 (38%), Gaps = 67/586 (11%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ L + L + Y + + DA YD + + L +T +P Sbjct: 16 EQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCFSLATVSAAP--- 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 P A + H V + + D S + + K + K+DG+AV Sbjct: 73 ----PPVAAGRTHHPVAHTGVQKLKDAASLSQWM---------HGKTDLWVQPKVDGVAV 119 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y G L +RGDG GED T+ R I AIPL++ GE + L +GE+FL + G Sbjct: 120 SLVYRKGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVL--QGELFLRREGH 177 Query: 182 EK-----INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 + IN A+ G + RN A+ L LD + + + P Sbjct: 178 HQQQDGGINARAQVAGAMM----RNTASPLLNDLD---------------LFIWAWPDGP 218 Query: 237 DTHLGRLLQFKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 RL + G P++ + S +V + + R L F DGVVI+ Sbjct: 219 KEMETRLTILAQGGFPLARAWSQPVSSVADVTRWRKQWF--REPLPFVTDGVVIR----E 272 Query: 296 QQEQLGFVARAPR--WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 +E G R W A+K+P +Q+T V + F VGRTG I+ VA+LEP+ + V Sbjct: 273 AREPPGKSWRPGEGSWVAAWKYPPVKQVTEVNALRFAVGRTGKISVVAQLEPITLDDKQV 332 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 S ++ + E+L L GD+V + AG IP++ VV RP + P Sbjct: 333 SKVSIGSLTRWEKLDLAEGDEVEVSLAGQGIPRLDAVVW--RPAKRSKPAPP-------- 382 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 R + + TG C Q L + D+ GMG+ QL + Sbjct: 383 -AARFDALSCLFATG--ACEEQFISRLVWLSGKPVFDLAGMGEATWRQLSSRHRFEHLFS 439 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L+ L A + + ++ F R++ ALG+ A A Sbjct: 440 WLALSVDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLPLPARAWQAL---ADD 496 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 T L+ Q +P VG A + N+ + L+ + Sbjct: 497 TWHQLQMRDERSWQTLPGVGAERARQLVNYIHHPDVAALAQWLVEQ 542 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 122/570 (21%), Positives = 219/570 (38%), Gaps = 47/570 (8%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ ++ + YH I D YD+L + L ++ L A Sbjct: 35 EIAKMEEQFGQWDKAYHQQGNSLIDDDIYDQLHQRLSHWKSCVKALEPA---VNSHITAL 91 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ H V L + + + + + K+DG+AV++ Y Sbjct: 92 AGVSDKVTHPVAHTGLKKLTGNLAASEWI---------LARKNLWVQPKVDGVAVTLTYL 142 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G L +RGDG G+D T + I AIP + P L + GE+FL ++++ Sbjct: 143 QGHLTQVISRGDGVRGQDWTDKAQYISAIPSLISPA--PPLLVLHGELFL------RVHD 194 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 ++ G + N R + AG+L + P + GV + + P + + +L Sbjct: 195 HRQKDSGGI--NARASVAGALMRKSPSSLLSQ------IGVFIWAWPDGPASMVEKLRTL 246 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + G +S+ ++ ++ + K+ P L F DG+VI+ + ++ Sbjct: 247 HRMGFTLSEEFSVPITSFTDAVHWRKIWFQSP-LPFVTDGIVIRQEEEPAGHY--WQSQP 303 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 W++A+K+P +QM V+ V F +GRTG I+ V L P+ + V L +R Sbjct: 304 GYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKWVKGVNLGTVARWKR 363 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 + GD+V++ AG IP++ V R + E+ P D+++ + R Sbjct: 364 WNVLPGDQVIVSLAGQGIPRLDKVAW--RVDKRDEISTP--------DMDQFHTFSCFR- 412 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 +C Q L R +D+ G+ I L + A +LT + + Sbjct: 413 RESTLCETQFIARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLASWLELTPEIIATVP 472 Query: 487 RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEEL 546 +G A + +KAK F +L ALG AA T AL+ E Sbjct: 473 GIGEVKANKIYLQFQKAKTRPFISWLAALGFP-----KAAINPRVPKTWAALQQQPRGEW 527 Query: 547 QKVPDVGIVVASHVHNFFAEESNRNVISEL 576 + ++G + F + L Sbjct: 528 LTMANIGAGRLKQITEFTTHPEMLQLAERL 557 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 135/583 (23%), Positives = 251/583 (43%), Gaps = 58/583 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++++ L + H + LY EI D YD+LM EL H + +P Sbjct: 37 DKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYDQLMSELT-----HWQFCLKQAPHSD 91 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +++ H V L + D++ + + ++ + K+DG+AV Sbjct: 92 FPVEVFPD-NKLVHPVAHTGLSKLKDKQEINRWL---------HGRLPVWLQPKIDGVAV 141 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y+NG LVS +RG+G G + T+ R I IP + EN P L ++GE+FL + Sbjct: 142 TLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNI--ENAPPDLVLQGELFLHKE-- 197 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E ++ G A RN AG + + D K+ G+ + + P Sbjct: 198 ----EHRQQLLGSDGA--RNRVAGLMMRKDHSSELKQ------IGLFIWSWPDGPAEMES 245 Query: 242 RLLQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +L + G P++ R E E+V E + F DG+V+K + Q Sbjct: 246 KLRKLADMGFPLALRYSHKIEEPEQVQKLRMHYFEQ--PMLFATDGIVLKQEIEPKGNQ- 302 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + + + WAVA+K P + Q+T VR+V F +GRTG I+ V L+ V + +S + + Sbjct: 303 -WRSGSNSWAVAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVNIGS 361 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 +L + GD+V + AG IP++ VV R ++ +++ P ++ Sbjct: 362 VRRWRQLDVLPGDRVTLTLAGHGIPKLAQVVW--RIKERQDIQPP----------DKQHY 409 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 A++ T + C Q LK + + G+ L E++ V L+A Sbjct: 410 HALSCLTLTVGCEQQFNARLKWLG--ENLQMTGVSSGSWAMLTERKLVTDLTGWLALSAQ 467 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL-E 539 ++ L +G K AQ + + KAK F+ ++ +G+ + L+ + L + Sbjct: 468 QIAALPGIGDKRAQAIYSQFSKAKNQPFSYWMKGIGVPYMD-----KLSDNVYHWQQLEQ 522 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 + +L++ VG + + +F ++ + + +L G+ Sbjct: 523 KLAAAQLKQQLTVGQL--KKLSDFVSDAQIKAIAEKLSVAGIT 563 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 124/576 (21%), Positives = 226/576 (39%), Gaps = 60/576 (10%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I ++ L L YH + D YD+L +LR ++ +S Sbjct: 37 IAVEINALEQQLNKWSAAYHQQGHSPVTDDIYDQLQDKLRVWQSCRGLPDKTES------ 90 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 P+ Q H V L + DE + + + + K+DG+AV++ Sbjct: 91 -QPIPGKGQFLHPVAHSGLKKLKDETALTRWMA---------GRKNLWVQPKVDGVAVTL 140 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y G LV +RG+G G++ T I AIP + N PA L ++GE+FL G ++ Sbjct: 141 VYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYI--ANAPALLTLQGELFLLMDGHQQ 198 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 ++GG N R+ AG+L + P + GV + + P T ++ Sbjct: 199 -----AKSGG---VNARSTVAGALMRKSPSPLLAQ------VGVFIWAWPDGPTTMKEKV 244 Query: 244 LQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + G P + S +V+ + + L F DGVV++ + Sbjct: 245 ALLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQ--APLPFVTDGVVVRQEEEPAGRY--W 300 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A +W++A+K+P + + V+D+ F +GRTG T V + P+ + + + + Sbjct: 301 QATPGQWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNIGSVT 360 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVERVEG 420 ++ + GD + + AG IP++ NVV +R T H C + Sbjct: 361 RWKQWDIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITAPNWDKFHQLSCFQRL----- 415 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C Q L +D+ G+G +L+ E ++ LT Sbjct: 416 --------PHGCEPQFLSRLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLLTPE 467 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 ++ + +G A+ + ++AK+ F+R+L ALG +V A + + Sbjct: 468 QIASIPGIGNARAEKIYQQFQRAKQQPFSRWLLALGFPQVVSVDAQ--------WQVVLR 519 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 S+ E + +G + A + +F + + L Sbjct: 520 RSLSEWATMAGIGQMRAKQIKHFLDHPDVQALADFL 555 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 142/662 (21%), Positives = 268/662 (40%), Gaps = 85/662 (12%) Query: 16 RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRH 75 ++ Y + + D EYD L +L+ + VG +PL + + Sbjct: 26 EKADHFYFNTEKEILTDNEYDILAEQLQ---------------STNVGCSPLIS--KTDL 68 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 + M SLD V++++ + K+V + + KLDG++ I+ ++ L A T Sbjct: 69 PLWMGSLDKVYNDKELNLWIKKV-------ASDKYIIQCKLDGVSCLIINKDNKL-KAYT 120 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RG+G G DI+ ++ + + +P + +R E+ + + F + + A Sbjct: 121 RGNGKVGTDISHLIKYF------IKDKCLPNNIALRCEIIIKKETFNQKYKHA------- 167 Query: 196 FANPRNAAAGSLRQLDPRITAKR--PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL-P 252 F+NPR+ +G + + I L Y + E L ++ ++ Sbjct: 168 FSNPRSFVSGVVNRKQENIVISELNDLCLIAYELINFPVNEYQKNILTQIEIIEQLNFIQ 227 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 + T+ A + +E + F++DG+VI LA + P+ ++A Sbjct: 228 FVNFKTISNEFLTQKALSNLFKEMKNNSLFEMDGLVI----LANTPYIRVTEGNPKHSIA 283 Query: 313 FKFPAQE-QMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 FK + V +E+ VG+TG TP + P + G VS T NA+ + G+ Sbjct: 284 FKVRGDNVKEAKVTFIEWNVGKTGVFTPKVHIVPTEINGTTVSCFTGFNANYLIEKGIGE 343 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 G +++ RAGD IPQ++ V + T + FP G R + Sbjct: 344 GAIILVTRAGDAIPQIIGV------KQTGVLTFPKDYEWKG----------DCRIVEKIE 387 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 + + + HFV ++D+ + + I++L + KLT L GPK Sbjct: 388 SKERIIKQILHFV--ESVDIPYIKEATINKLYNNGC-TSIELFLKLTQKDLL---LFGPK 441 Query: 492 SAQNVVNALEKAKETTFARFL--YALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 + + N+++K+ E +FL Y +GE L + L LE +L + Sbjct: 442 LSSTIYNSIQKSFEAPIEKFLSGYNAFGDYIGEKKILLLLQKYPNLFELENLDAIDLVSI 501 Query: 550 PDVGIVVASHVHNFF--AEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 +G A+ + F A+ N+I L +GV P N E+ V ++G Sbjct: 502 EGIGSKTATQIKQHFINAKLIYNNIIQNKLFKGV-LHTPSKQNTVELF------KVCVSG 554 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKAQELGIEVIDEAEM 665 + + + K R G ++ +++KK ++I + +K+ KA +GI ++ + Sbjct: 555 TRDPLFIQELKNR----GFVLSDNITKKVKVLIVKNSNEETTKVKKANSVGITILTLEDF 610 Query: 666 LR 667 + Sbjct: 611 KQ 612 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 136/527 (25%), Positives = 225/527 (42%), Gaps = 69/527 (13%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ++ +L Y D I D++YD L+ EL + H L +S Sbjct: 20 QIEESLERANDAYRNTDDSIISDSDYDALIDELARRDPGHALLTEVES-------EADFG 72 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQ---DRLKNNEKVTWCCELKLDGLAVSILYE 126 ++RH++PMLS + V + A+ +RV+ + V KLDG+A + + Sbjct: 73 AGKVRHQIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL--K 130 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 +GVL A+RGDG TG +IT I KL + GE+ + Q+ F++ Sbjct: 131 DGVL---ASRGDGLTGNNITH-------ILPKLVVHGVGD-----GELVMIQSYFDEHLS 175 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + F +PRN G++ PR A + L + H + F Sbjct: 176 E-------EFKHPRNVVTGAVGADTPRPAAMKAL----------------NDHSIHFVSF 212 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 S T+ E+ + + DG+V+ V S +++LG Sbjct: 213 TTLTRIDSRTDTIVAQLPEIREY------LLGNTPYPTDGLVLAVESPELRKELGSTGHH 266 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 W VA K + T V V++Q+G+TG +TPV +L+ V ++G +++N T HNA ++E Sbjct: 267 HNWMVAAKTVGETATTAVVGVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVEE 326 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 +G+ +G I R+G++IP +V+ + PTHCP C ++R C Sbjct: 327 MGIDVGAMATITRSGEIIPFLVSATPAPNGAS-----LPTHCPACTEHLKRRGD--FLVC 379 Query: 427 TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLE 486 C +R L HF + +D G D+L+ V + ++F +TA + + Sbjct: 380 INNE-CEGRRHARLHHFFNIIG-SIDLFGPVACDKLIAAG-VRSIQEVFAITAAEFEAM- 435 Query: 487 RMGPKSAQNVVNALEKAKETTFA--RFLYALGIREVGEATAAGLAAY 531 GP + N+V LE AK R L A+GI +G + L + Sbjct: 436 GFGPGQSANLVAELEAAKTRPVDDFRVLAAMGISNLGRGDSKKLLRH 482 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 351 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 144/668 (21%), Positives = 249/668 (37%), Gaps = 71/668 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 T++ L YH I D EYD LM L+EL +VGA Sbjct: 23 TDIEEALSVSSEYYHNTGTSLISDQEYDILMDRLKELNPSSKIFA-------QVGAPV-- 73 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 +++ M S++ + +E K V L + KLDG++ + +N Sbjct: 74 KGKKVKLPFWMGSMNKIKADE------KAVNKWLNEYSG-PYVISDKLDGISCLLTIKNN 126 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 TRGDGT G+DIT + I I + L E I + +RGE+ + + FEK E Sbjct: 127 K-TKLYTRGDGTYGQDITHLLGLI-NIDIGLLEE-IDQDIAIRGELIMSKKNFEKYQE-- 181 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKK 248 + AN RN G + + + E + D +L K+ Sbjct: 182 ------IMANARNMVGGIVNSKPESVNKDHAADV---DLIFYEVIKPNDKLSRQLKILKE 232 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 WGL V +L + E + G++IDG+++ N+ + G P Sbjct: 233 WGLKVVYYNIYKTFDVNILESV--LSERKKKSGYEIDGIIVTDNNKHVRNISG----NPS 286 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 ++ AFK T V+ V + + G + P + + V ++ V + T NA I Sbjct: 287 YSFAFKGDTPTIDTVVKRVIWTPSKDGVLVPRIKFKKVRLSNVDLEYTTGFNAKYIVDNK 346 Query: 369 LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTG 428 + G + + R+GDVIP + +VV + D + + + Sbjct: 347 IGSGAIINVVRSGDVIPYITHVVKPAKKPDLPNIEY-----------VWDKNGVNIILAD 395 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 + L F+ R + + + + I +LVE + T + +T ++ Sbjct: 396 INDNETVIIKRLTKFM--RNIGAENISEGITTRLVEAGF-DTIPKIINMTEEDFLTIDGF 452 Query: 489 ----GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 K N+ N+L+ T G R G + + + + Sbjct: 453 QERLAEKIYNNLQNSLDNLDILTLMDASNIFG-RGFGTKKFKKILDVYPNIVNQYTKETD 511 Query: 545 -----ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 +L + + V+ F E N +++ + I+ + F Sbjct: 512 NIWRKKLLDIEGFDTIT---VNKFLGEMPNFQKFYKVINK--TITIKPYISEVNSEGIFQ 566 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIA--GEAAGSKLAKAQELGI 657 +TVV TG D + + G KV+GSVSK T L++ GE + +K KA++LGI Sbjct: 567 NQTVVFTG----FRNADWQKFIENEGGKVSGSVSKNTSLLVYNDGEESSAKYQKAKQLGI 622 Query: 658 EVIDEAEM 665 + + ++ Sbjct: 623 KTMTKSSF 630 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 121/585 (20%), Positives = 234/585 (40%), Gaps = 85/585 (14%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE------LETKHPELITPDSPTQRVG 63 L L+ + Y + E+ D YD+++ + R L + P+ + P+ T+R+ Sbjct: 52 RLGEQLQEWDRQYQIEGVSEVSDEVYDQILAQWRRGQRCLNLPDRLPQPVQPN--TERL- 108 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 ++H +P L + + + + + + K+DG+AV++ Sbjct: 109 ---------VKHPIPHTGLKKL-EFKEIAPWLESRH---------EVWLQPKVDGVAVTL 149 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG LVS +RGDG+ G + I+ IP + +I + ++GE+F K Sbjct: 150 HYENGHLVSMISRGDGSKGLNWREKADFIQGIPKTI---SIKQSIVLQGELFW------K 200 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE ++ G N R+ AG L + D + GV + + +L Sbjct: 201 LNEHVQKIDGGQ--NARSKVAGWLMRKDMPAQVTDDI-----GVFIWSWPDNSTPMSQQL 253 Query: 244 LQFKKWGLPVSDRVTLC----ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + G ++ R + +S + Y+ + ++ F DGVV+K S Sbjct: 254 SELAMLGFDLAQRYSHPIVESQSIAQWRDHYYSI-----SMPFATDGVVLK--SFPTPSS 306 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 + A W++A+K+P + ++ V D+ F+VGR+G + +A +EPV + VS L Sbjct: 307 SAWRANQNSWSIAWKYPLKSIVSDVVDLTFRVGRSGVVNVIANIEPVRIDDKKVSKIRLG 366 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 + + ++ + +GDK+ + +G P + V+ ++P + Sbjct: 367 SLNSWKQKDVLVGDKIQLTLSGHGAPLMEKVIWRQKPRQYLNT------------LPLEN 414 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 A++ + C +Q L + +++ G+G+K VEK L +L Sbjct: 415 FHALSCLSYSTDCASQFVARLTWLG--KQLNIRGVGEKTWMVWVEK------YGLSELLG 466 Query: 480 GKLTGLERMGPKSAQ--NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 + PK+ Q N + L++A+ A +L LGI + L + A Sbjct: 467 WLSPDWQNRLPKTQQTANALEQLQQAQHQLTANWLKGLGIP----LKSEQLEK----IAA 518 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 + S E + V + + A + + L G+ Sbjct: 519 ITTLSEPEQIEKMAVSETRKQALQQWLAAPEIKQALQTLQNLGIS 563 >UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUQ1_PROST Length = 570 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 110/588 (18%), Positives = 219/588 (37%), Gaps = 90/588 (15%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH-------PELIT 54 + ++++ +L L+ LY + + D YD+L+ ++ + P + Sbjct: 47 DELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQLPPIHLP 106 Query: 55 PDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCEL 114 P S T ++H + L + +E + + + + Sbjct: 107 PHSRT-------------VKHPIVHTGLKKL-NEVDIGKWI---------DTREEVWLQP 143 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG+A+S++Y+ G LVS +RG+G G + I AIP +L +L ++GE+ Sbjct: 144 KVDGVAISLVYQQGKLVSMISRGNGIEGLEWRDKADFIPAIPKQLPTSQP--QLILQGEL 201 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 F ++ + ++ G V N RN AG L + +T + + F + EG Sbjct: 202 FW------RLKDHRQQASGGV--NARNQVAGWLMRKSKPVTPEANIDVFIWAW--PEGVG 251 Query: 235 LPDTHLGRLLQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + Q G P++ + + +V + + + F DG+V+K S Sbjct: 252 KAEEQW---RQLANLGFPLTQQYSHKVTTMAQVKKWQSYYYQQ--PMPFATDGIVLK--S 304 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 + W+VA+K P + V D+ F+VGRTGA++ VA +EPV + V Sbjct: 305 FPTPRVAAWQVNHNSWSVAWKHPYTRIASKVTDLHFRVGRTGAVSVVAEIEPVELDSKKV 364 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVC 411 S L + ++ L +GD + + AG IP++ +V+ +R H C Sbjct: 365 SRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKLESVIWRLQQRTYPDLSQFKQFHALSC 424 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + C Q L + + + G+ + + E +++ Sbjct: 425 FVMTPQ--------------CEQQFVARLNWLG--KQLKIKGISEATWREWAEHYHLN-- 466 Query: 472 ADLFKLTAGKLTGLERMGP--KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 KLT + P K + ++ + +L LGI Sbjct: 467 ----KLTTWLSPSWQTSLPNTKKTKKIIEQFRLVGQQPLMNWLKGLGIPL---------- 512 Query: 530 AYFGTLEALEAAS-IEELQKVPDVGIVVAS--HVHNFFAEESNRNVIS 574 L + S ++ + +G+ + ++ + + + + Sbjct: 513 -KDKHLSLITELSLLDNTLFLEGLGLSIIQKTKLNQWLSTPDIKEIFQ 559 >UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain protein n=2 Tax=Providencia RepID=D1P0P2_9ENTR Length = 557 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 122/575 (21%), Positives = 222/575 (38%), Gaps = 68/575 (11%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 L L+ Y V I D YD+L+ + ++ + L DS Q PL Sbjct: 35 QRLGNQLQEWNKNYLVDGFSPINDEVYDQLLSKWQQRQRC---LSLSDSLPQ----VPLP 87 Query: 69 AFSQ-IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 + ++H +P L + + + + + K+DG+AVS++Y+N Sbjct: 88 ILTPLVKHPLPHTGLKK-QNLNEITTWIAKRK---------EIWLQPKVDGVAVSLVYDN 137 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G LVS +RG+G G + I +P + I R+ ++GE+F K+N Sbjct: 138 GQLVSLISRGNGVEGLEWRKKADFILDLPKVIP---IKQRVILQGELFW------KLNNH 188 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFK 247 ++ G + N R+ AG L + + + G+ + + +L + Sbjct: 189 VQKQLGGL--NARSKVAGWLMRKKLPEKIEDNI-----GIFIWAWPDGDLQQEVQLSRLS 241 Query: 248 KWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + G +S R + S E+++ L F DG+V+K S + + Sbjct: 242 EIGFDLSKRYSHQVTSIEQIIQRQEDYFST--PLPFATDGIVLK--SFPTPPSAAWQSNQ 297 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 WA+A+K+P Q ++ + ++F VGRTG + VA ++PV + VS+ L + + ++ Sbjct: 298 NSWAIAWKYPLQNIISEITGLKFGVGRTGIVNVVASIKPVTLDAKQVSHVNLGSLNSWKK 357 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARC 426 L +GD + + AG IP+V V+ D E + +E C Sbjct: 358 KDLLVGDHIQLTLAGHGIPKVEQVIWRVAHRDYPETML-------------LEQFNRWSC 404 Query: 427 -TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 + + C Q L + + + G+G+K Q E L +L Sbjct: 405 FSYSIECLPQFVARLTWLG--KQLGIKGVGEKTWQQWAEN------YGLSQLLEWLSPSW 456 Query: 486 ERMGPKSAQNV--VNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 + PK+ N+ + L+K + A +L L I + T+ L +I Sbjct: 457 QGQLPKTKTNLKHLEQLQKVADQPLAVWLKGLDIPL-----SNTEIKKIDTISMLYEPTI 511 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLA 578 + K+ D H + +I E+ Sbjct: 512 IKYLKLSDKREQQFKHWIEVTEIKLALQIIQEIKK 546 >UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophonus nasoniae RepID=D2U3F9_9ENTR Length = 547 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 103/520 (19%), Positives = 197/520 (37%), Gaps = 84/520 (16%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + +++ + + L+ + Y++ + D YD++ + L P T + Sbjct: 46 LHREIKAINSELKRWDEAYYINGQSLVNDETYDQIFALWKHWSNC---LRLPPDKTNTL- 101 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L + H V L + + + + + K+DG+A ++ Sbjct: 102 --SLPIKGRKTHPVIHTGLKKI-TADEIARWIA---------GRHEVWLQPKVDGVAATL 149 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y+ G L + +RG+G G D T + AIP + N +L ++GE+F Q G ++ Sbjct: 150 VYKKGKLAALISRGNGIEGIDWTPKADFLPAIPKTIP--NHATQLILQGELFWYQTGHQQ 207 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 GG AN RN AG L + + + + + G+ + + P + Sbjct: 208 -----AIAGG---ANARNKVAGWLMRKNLLVQQEEQI-----GIFIWSWPDGPSNMQTQF 254 Query: 244 LQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG- 301 Q ++WG P++ R L S +++ + + F DG+V+K LG Sbjct: 255 AQLERWGFPLTKRYSHLVTSVDQITQWQRYYYNQ--PMPFATDGIVLK----QLPYTLGQ 308 Query: 302 -FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A W+VA+K+P Q ++ V V+F +GRTG I P+ Sbjct: 309 YWQAGINNWSVAWKYPTQNRVAQVAAVKFNIGRTGKINPII------------------- 349 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERV 418 G+ GD + I +G IP+ +V +R + H C R Sbjct: 350 -------GILPGDAIQISLSGHGIPKFDKIVWQIKQRKMLSVPEQKNYHQLSCFYYSMR- 401 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 C +Q L + + ++G+ +K L+ + D +LT Sbjct: 402 -------------CESQFVARLVWLA--KQLKMEGINEKGWLALIRAGKITNLMDWSRLT 446 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIR 518 ++T + + + A++ F+ +L LG+ Sbjct: 447 LEQITEVAMFKANKGKFIYQQFLSAQKRPFSEWLKGLGVP 486 >UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage RSL1 RepID=B2ZXT5_9CAUD Length = 625 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 147/677 (21%), Positives = 256/677 (37%), Gaps = 93/677 (13%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ Q L + + + Y+ A + DAE+D L +R L+ K EL Q Sbjct: 1 MKVTAQNLNKAKKLYKQARVAYYEK-AEIMTDAEFDALEDSIRRLDPKWDEL-------Q 52 Query: 61 RVGAAPLAAFSQ--IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-WCCELKLD 117 + G + ++ M S + ++ E V + V W KLD Sbjct: 53 KTGTKVEVKNKKQEVKLLEFMPSKNKIYPEH--------VAKYAAKHASVEVWNVSHKLD 104 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDIT---SNVRTIRAIPLKLHGENIPARLEVRGEV 174 G ++ + Y G TRGDG G+DI+ ++ I IP + + + + R E Sbjct: 105 GTSLQLAYRGGRPWKLITRGDGALGKDISFFLPHLVKIGMIPDHIKTDAL--VVVFRCEG 162 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLD--PRITAKRPLTFFCYGVGVLEG 232 +P A FEK + GK + N R A G + D P + + YG+ EG Sbjct: 163 IMPVAVFEK------KWAGK-YDNARQLANGVFNRQDMHPALADVHMVVLSVYGMKQGEG 215 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 ++ K+ G V + + + + ++R +++DG+++ Sbjct: 216 ----------IMYAKRQGFHVVP-TRMLKGRLDAEVLTRLLNKEREASIYEMDGLIL--- 261 Query: 293 SLAQQEQLGFVA-RAPRWAVAFKFPAQE--QMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 + + + + P+ AFKF +E V V +Q R P ++P + Sbjct: 262 -VPSPRIMSYTSPDRPKDITAFKFNDEENAAEVPVESVVWQKTRLHRWQPKITIKPTFMD 320 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 GV+V+N T HN ++ G+ G V + R+G VIP++V VV + + P Sbjct: 321 GVMVTNVTAHNPAWMKERGIGPGAIVKVLRSGGVIPKIVGVV---KKGKFQPPPGPYV-- 375 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 G EG+A + HF++ + ++ + K I +L E+ + Sbjct: 376 EDGRLFRMTEGDASTE-----------VRGIHHFMTT--LGIELLASKTITKLYEEGF-T 421 Query: 470 TPADLFKLT---AGKLTGLERMGPKSAQNVVNALEKAKETTF---------ARFLYALGI 517 T D L +G K +Q + LE+ +T F +G Sbjct: 422 TVYDYIDLAINGDEGRLQTAGIGVKMSQKIQAELERVLGSTINLRLLMVASGCFRDGIGR 481 Query: 518 REVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNR-NVISEL 576 R++ AAG++ F L++ + A EL KV + V + + + EL Sbjct: 482 RKLEALEAAGISMRF-LLKSSDFALRGELSKVKGFSDITIEAVIDGVNAFRKWFDEVREL 540 Query: 577 LAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKT 636 L P + + G+ V TG D + ++ G + SK T Sbjct: 541 LEVDGSLPKAKKV----VTGKLTGQFVSWTG----YRNKDEEQKVEAWGGTIVPFGSKTT 592 Query: 637 DLVIAGE-AAGSKLAKA 652 L+ + SK+ KA Sbjct: 593 ILLYSPSGKTSSKVEKA 609 >UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schistosoma mansoni RepID=C1M1N3_SCHMA Length = 311 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 120/208 (57%), Positives = 152/208 (73%) Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 +V+KV+ Q+ LGFVARAPRWAVA+KFPAQE T + +E+QVGRTGA+TPVARL PV Sbjct: 1 MVVKVDDRRLQQDLGFVARAPRWAVAYKFPAQEASTRLEAIEWQVGRTGALTPVARLAPV 60 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 V GV+VSNATLHN DE+ RL LR GD VVI RAGDVIP+V+ + + V P Sbjct: 61 SVGGVVVSNATLHNIDEVHRLDLRAGDTVVIYRAGDVIPKVMRRLDDDGHAARAPVALPD 120 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CPVC S V R EGE VARC+ GL C AQRKE+L+HF SRRAMD++G+G+K +D +V+ Sbjct: 121 ACPVCASAVVRPEGEVVARCSAGLFCPAQRKEALRHFASRRAMDIEGLGEKWVDLMVDAG 180 Query: 467 YVHTPADLFKLTAGKLTGLERMGPKSAQ 494 +HTPAD+++L+A +L L RM A+ Sbjct: 181 LLHTPADIYRLSAEQLLQLPRMXXXXAR 208 >UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate iridescent virus 3 RepID=VF205_IIV3 Length = 756 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 117/558 (20%), Positives = 204/558 (36%), Gaps = 75/558 (13%) Query: 6 QQLTELRTTLRHHEYLYHVM-DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ +L + Y+ P + D EYD L+ + EL +VGA Sbjct: 7 EKYNQLLKLKEKADKAYYNGVGDPIMSDEEYDNLVDYMDELNPDGGVKT-------KVGA 59 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 +P + ++ +PM SLD + + F + K + K + KLDG++ + Sbjct: 60 SPSRS-KSVKLPMPMNSLDKIKTQHEFDNWMKNWK------PKAMLLVKEKLDGVSCLAV 112 Query: 125 Y--ENGV--LVSAATRGDGTTGEDIT---------------------SNVRTIRAIPLKL 159 + E + TRGDGTTG +IT T L Sbjct: 113 FTLEQNKPPKIELFTRGDGTTGTNITRLLNHGLKVGNDYCFDDMVNEDKWTTDWGCYLNA 172 Query: 160 ----HGENIPAR-LEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRI 214 H + +P + + +RGE+ + + F+ + F N RN +G + + P Sbjct: 173 EAIDHWKKLPVKKVYIRGELIVTRKNFQTWYSNR-------FMNARNLVSGQVNKKSPDP 225 Query: 215 TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG-LPVSDRVTLCESAEEVLAFYHKV 273 + + F Y + V++ TH L F+ G PV R + + Sbjct: 226 KILQDIDFVPYDL-VIDLKRPTMTHEVEHLLFRMIGATPVYTRFLFLSDTISTESMADYL 284 Query: 274 EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGR 333 E + ++IDG+VI+V+ R P+ VAFK T V VE+ + + Sbjct: 285 ERRKEKSDYEIDGLVIQVDDDTLFAPPD--NRNPKDTVAFKIMGTTARTTVTHVEWNLSK 342 Query: 334 TGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS 393 P + PV ++GV +S T + I + G V+I R+G+VIP +V+V+ Sbjct: 343 GSKYKPTIHITPVSLSGVTISKVTGFHGKYISENKIGKGAVVLITRSGEVIPHIVSVIS- 401 Query: 394 ERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV-SRRAMDVD 452 P ++V+ P++ G G + + HF S + Sbjct: 402 --PAAKQDVLLPSNGVWKG---------VDIYYDGAEEPREITVKKMVHFFTSLGCL--- 447 Query: 453 GMGDKIIDQLVEKEY--VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFAR 510 G+ + +L + Y V + G + K ++ + KA Sbjct: 448 GLKTMTVGRLYDAGYRTVEAIVGADTKKLVLINGFRMVAQKLLPSMWVNVAKATPHELMA 507 Query: 511 FLYALGIREVGEATAAGL 528 L A G +G + Sbjct: 508 ALNAFG-EGIGLRKIQNI 524 >UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, similar to Thermus thermophilus SW:P26996 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVT0_MSEPV Length = 522 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 114/578 (19%), Positives = 230/578 (39%), Gaps = 87/578 (15%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 L ++ ++ Y+ I D YD+++ + + K+P+ + T+++G P Sbjct: 22 LEDISEIIKILNEKYY-EGETLISDEIYDKIIEYVNK---KYPD----NDITKKIGYEPK 73 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 +++ M S + ++DE+ K+ + ++ + +K DG +S+L++ Sbjct: 74 N---KVKLPYYMGSENKIYDEDE-----KKFNNWIEKYGTSSIIVSVKADG--ISVLWDI 123 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPA--RLEVRGEVFLPQAGFEKIN 185 G TRGDG G+DI+ ++ + ++P +RGE+ + + Sbjct: 124 GK-NKLYTRGDGNYGKDISWFLKYMN--------YDLPELSDYVIRGELVINKDK----- 169 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 RN AG++ L+ + G +L + +L Q Sbjct: 170 -------------TRNDVAGAINSLEANRNEDILKEIYFVGYEILNPRFNQENQFKKLKQ 216 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K + S E + Y ++ +P + +DIDG+VI+ N++ G Sbjct: 217 HKIRHIKAMKYDIEDVSLECLSELYQEL---KPKMKYDIDGLVIRNNNVNDPITDG---- 269 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 P W+ A+K P T V +V +Q+ + P+A LEP+ + + + +NA + Sbjct: 270 NPPWSFAYKPPNTIYTTKVLNVIWQISKQNKYIPIAELEPIKLENKTIKRVSCYNAKFVT 329 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 G+ V I G IP++VNV+ PV + + +G+ + Sbjct: 330 ENGIGTDAIVEIEYRGGAIPKLVNVIK----------------PVTVDESDLPDGKII-- 371 Query: 426 CTGGLICGAQRKESLKHFVSR--RAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 L KES +S+ + + + K+I+ L + ++ +L LT Sbjct: 372 -DNHLYAPIDSKESNIKIISQFFKILSIQAPNKKVIEHLYDNG----ITNIVELLKSDLT 426 Query: 484 GLERMGPKSAQNVVNALEKAK--ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L K +N ++++ AK E + + AL I + T L + T + Sbjct: 427 ELLDTTKKINKNALHSINIAKSIEISLPLAIAALSIPNL---TEKVLEKIYNTHKDFLT- 482 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 + ++ +K+ + + A + + N+N+I E L Sbjct: 483 TKQDFEKIKGINKLSAEKIKSQI--LKNKNMIDEYLKL 518 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 46/400 (11%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + +++ L T + H +Y+ P + D E+D L+ EL L ++T ++G Sbjct: 50 QHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSPVLT------QIGG 103 Query: 65 APLA-----AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 L + H MLSL++V + + F + QD+ + K DG+ Sbjct: 104 GNLQHNDTRQRDRQPHRQQMLSLNSVRERTAVDKFYQLHQDQ-------QLLIQPKFDGM 156 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+ ++YE G+LV A++RGDG G+D+ + + A+ + P L + GE+++ Q Sbjct: 157 AIELVYEKGMLVGASSRGDGKQGKDLLALMLRSNAVNSMI---AYPYTLVIHGELYVGQQ 213 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DT 238 ++ + + R+ AG QL P T L F + + P + Sbjct: 214 DWQ---------LRGKYVSSRHMTAGIASQLSPAQTDVMSLRFMPW-----RWIDSPYNN 259 Query: 239 HLGRLLQFKKWGL----PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L L Q G +S + + + LA Y E F +DG+V+K+ + Sbjct: 260 ELMGLAQLAMLGFADMSKMSHVIDRPQDIDYWLAHYQNTEA------FLLDGIVLKLANN 313 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 Q Q G APRWA+A KF + ++ V D+ +QVG++G +TP+ ++P+ ++G V+ Sbjct: 314 TLQRQYGHTQHAPRWALALKFTGPKGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVT 373 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE 394 + + + + + +G +V I G+ PQ+ +V Sbjct: 374 RVSGRSQPWLLQSKIEVGSQVEIELVGNATPQLTRLVSDR 413 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 101/385 (26%), Positives = 159/385 (41%), Gaps = 73/385 (18%) Query: 12 RTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFS 71 + ++ + Y+ I D EYDRL++ E P+ Sbjct: 5 KEFIKRCQEAYYQ-GMSLISDEEYDRLIKRFPLEEEIGPK-------------------G 44 Query: 72 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 131 I H M SL V+ R + KLDG A+S+LY NG V Sbjct: 45 DIPHLYRMYSLQKVY--------YGRGDKA--PFNPLGQVETDKLDGCAISLLYINGEFV 94 Query: 132 SAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRT 191 A TRG+G G D+T NV+ + IP + + +P + + GEV + + Sbjct: 95 QALTRGNGILGNDVTHNVK-MLNIPKTISQK-VPTQ--ITGEVLITKEV----------- 139 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKR----PLTFFCYGVGV-LEGGELPDTHLGRLLQF 246 N RN A+G++ D +R L F YG+ E + + +L +L Sbjct: 140 -----ENKRNYASGAINLKDSDDFIQRIGEGGLIFVAYGIQCSAETVGITEAYLKDMLWL 194 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + + V +F+ + DG V+++N + + G+ + Sbjct: 195 ENENF---------LTVVNVRSFFKWI---------PTDGKVVRINDNNKFFREGWTNKF 236 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PR A A K + ++T + VE+QVG +G +TPV EPV + + ATL+N D I Sbjct: 237 PRGAFAIKEDEEGEITTLVKVEWQVGASGKVTPVGYFEPVIIDDATIVKATLNNVDYINA 296 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVV 391 L L IG ++ + RAG VIP +V V Sbjct: 297 LDLEIGCQIRVIRAGGVIPCIVERV 321 >UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R767_PLAYO Length = 354 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 93/170 (54%), Positives = 123/170 (72%), Gaps = 1/170 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ +LR + H Y+ +D P I DAEYDRLM EL +E ++PEL+TPDSPTQRV Sbjct: 186 EVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRV 245 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P+ AF+++RHEVPMLSL+N F EE AF++RV+ L + + + E KLDGLAV+ Sbjct: 246 GAPPVEAFTEVRHEVPMLSLENAFSEEDLTAFDRRVRKELSRD-TLEYVAEPKLDGLAVN 304 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 +LY++GVLV AATRGDG GED+T NVR +RAIPL+L GE+ P R E G Sbjct: 305 LLYQDGVLVRAATRGDGEVGEDVTHNVRAVRAIPLRLKGEDFPDRFEGAG 354 >UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BKC6_9BACT Length = 183 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 66/168 (39%), Positives = 108/168 (64%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I ++ LR L H + Y+++D P I D E+D+L+++L ELE ++P+L +SPT+ Sbjct: 1 MQEIRNKIEALREVLHDHNHRYYILDDPIISDYEFDQLLQQLNELEVQNPDLTDLNSPTR 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG +F + H+ PM SL N + +E + + +R++ L ++ + CELK DG + Sbjct: 61 RVGGGVTKSFETVPHKYPMYSLSNTYSKEELMQWEERLRKSLGEETQIEYTCELKFDGAS 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL 168 +S+ YENG+L+ A TRGDG G++IT+NVRTI+ +PLKL + + Sbjct: 121 ISLTYENGILIKAITRGDGLQGDNITTNVRTIKTVPLKLKSDFPKFFV 168 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 911 0.0 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 866 0.0 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 865 0.0 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 865 0.0 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 863 0.0 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 862 0.0 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 853 0.0 UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 849 0.0 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 846 0.0 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 846 0.0 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 841 0.0 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 841 0.0 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 837 0.0 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 836 0.0 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 836 0.0 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 834 0.0 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 831 0.0 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 829 0.0 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 827 0.0 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 826 0.0 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 824 0.0 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 823 0.0 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 823 0.0 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 823 0.0 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 821 0.0 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 819 0.0 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 818 0.0 UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 816 0.0 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 815 0.0 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 815 0.0 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 809 0.0 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 809 0.0 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 809 0.0 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 809 0.0 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 808 0.0 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 806 0.0 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 806 0.0 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 806 0.0 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 805 0.0 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 804 0.0 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 804 0.0 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 803 0.0 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 803 0.0 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 800 0.0 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 799 0.0 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 798 0.0 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 798 0.0 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 796 0.0 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 796 0.0 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 796 0.0 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 796 0.0 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 794 0.0 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 794 0.0 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 794 0.0 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 793 0.0 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 792 0.0 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 789 0.0 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 789 0.0 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 789 0.0 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 788 0.0 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 788 0.0 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 787 0.0 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 787 0.0 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 787 0.0 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 786 0.0 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 786 0.0 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 785 0.0 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 784 0.0 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 784 0.0 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 783 0.0 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 783 0.0 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 783 0.0 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 782 0.0 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 782 0.0 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 781 0.0 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 781 0.0 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 780 0.0 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 778 0.0 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 777 0.0 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 777 0.0 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 776 0.0 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 776 0.0 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 775 0.0 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 775 0.0 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 773 0.0 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 772 0.0 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 770 0.0 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 769 0.0 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 769 0.0 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 768 0.0 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 768 0.0 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 766 0.0 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 765 0.0 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 764 0.0 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 764 0.0 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 764 0.0 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 763 0.0 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 761 0.0 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 760 0.0 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 759 0.0 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 756 0.0 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 755 0.0 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 754 0.0 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 751 0.0 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 750 0.0 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 749 0.0 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 747 0.0 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 746 0.0 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 746 0.0 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 745 0.0 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 744 0.0 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 743 0.0 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 742 0.0 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 739 0.0 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 730 0.0 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 727 0.0 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 726 0.0 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 725 0.0 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 723 0.0 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 720 0.0 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 720 0.0 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 720 0.0 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 718 0.0 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 717 0.0 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 716 0.0 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 714 0.0 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 707 0.0 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 706 0.0 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 704 0.0 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 703 0.0 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 703 0.0 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 702 0.0 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 702 0.0 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 702 0.0 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 700 0.0 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 699 0.0 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 698 0.0 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 697 0.0 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 694 0.0 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 692 0.0 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 690 0.0 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 685 0.0 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 682 0.0 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 681 0.0 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 681 0.0 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 680 0.0 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 679 0.0 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 679 0.0 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 678 0.0 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 675 0.0 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 673 0.0 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 672 0.0 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 671 0.0 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 667 0.0 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 665 0.0 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 664 0.0 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 663 0.0 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 662 0.0 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 660 0.0 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 648 0.0 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 647 0.0 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 644 0.0 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 642 0.0 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 641 0.0 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 640 0.0 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 640 0.0 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 639 0.0 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 635 e-180 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 631 e-179 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 628 e-178 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 627 e-178 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 627 e-178 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 626 e-177 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 623 e-177 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 622 e-176 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 620 e-176 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 618 e-175 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 616 e-175 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 614 e-174 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 614 e-174 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 614 e-174 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 609 e-172 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 607 e-172 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 607 e-172 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 606 e-171 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 605 e-171 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 604 e-171 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 603 e-171 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 602 e-170 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 599 e-170 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 599 e-169 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 599 e-169 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 598 e-169 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 592 e-167 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 591 e-167 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 589 e-166 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 576 e-162 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 572 e-161 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 570 e-161 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 567 e-160 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 562 e-158 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 559 e-157 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 559 e-157 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 551 e-155 UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 550 e-155 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 547 e-154 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 544 e-153 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 535 e-150 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 534 e-150 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 534 e-150 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 516 e-144 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 507 e-142 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 499 e-139 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 499 e-139 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 479 e-133 UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN 477 e-133 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 461 e-128 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 453 e-126 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 451 e-125 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 443 e-123 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 443 e-123 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 436 e-120 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 429 e-118 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 428 e-118 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 425 e-117 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 411 e-113 UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera ar... 410 e-113 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 406 e-111 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 401 e-110 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 401 e-110 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 398 e-109 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 395 e-108 UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 394 e-108 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 380 e-104 UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp.... 380 e-103 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 357 1e-96 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 356 1e-96 UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain prot... 353 1e-95 UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Provide... 351 7e-95 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 347 9e-94 UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophon... 338 3e-91 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 338 4e-91 UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage... 301 5e-80 UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate ir... 296 2e-78 UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schi... 282 2e-74 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 276 2e-72 UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, s... 264 1e-68 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 263 2e-68 UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 252 2e-65 UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n... 252 2e-65 Sequences not found previously or not previously below threshold: >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 911 bits (2356), Expect = 0.0, Method: Composition-based stats. Identities = 631/670 (94%), Positives = 655/670 (97%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELE +HP+LITPDSP+Q Sbjct: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK+ +K+TWCCELKLDGLA Sbjct: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VSILYENGVL+SAATRGDGTTGEDITSNVRTIRAIPLKL G+NIPARLEVRGEVFLPQAG Sbjct: 121 VSILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEKINE+ARRTG KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG+LEGGELPDTHL Sbjct: 181 FEKINEEARRTGNKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL 240 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 GRLLQFK WGLPVSDRVTLC+S E VL FYHKVEEDRPTLGFDIDGVVIKVNS+A QEQL Sbjct: 241 GRLLQFKAWGLPVSDRVTLCDSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMALQEQL 300 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE+TR V FPTHCPVCGSDVERVEG Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPVEFPTHCPVCGSDVERVEG 420 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF+LTAG Sbjct: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG 480 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 KLTGL+RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA Sbjct: 481 KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ASI+ELQKVPDVGIVVA+HV NFFAEESNR+VI +LLAEG+HWPAPIV+NA+EIDSPFAG Sbjct: 541 ASIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGIHWPAPIVVNADEIDSPFAG 600 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+VLTGSLS MSRDDAKARLV LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI+VI Sbjct: 601 KTIVLTGSLSLMSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIDVI 660 Query: 661 DEAEMLRLLG 670 DEAEMLRLLG Sbjct: 661 DEAEMLRLLG 670 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 353/669 (52%), Positives = 479/669 (71%), Gaps = 4/669 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ LR + H Y Y+V+ P IPD+ YD L EL++LE K+PE ITP SPTQRV Sbjct: 9 KIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA PL F + HE+PMLSLDNVFDE+ AF+KR++ RLK ++ + CE K+DG+A+S Sbjct: 69 GAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVALS 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +LYENG L+ AATRGDG TGE++T N RTI ++PL+L G + P +E+RGEV +P+ GF Sbjct: 129 LLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGFA 188 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K N +A + G K FANPRNAA+GSLRQLDPRITAKRPL F+ Y +G+L+G + P H Sbjct: 189 KFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCDV 248 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L FK WG+PV + + E L +Y + + R + FDIDG+VIKVNSL Q +LGF Sbjct: 249 LKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELGF 308 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 V+RAPRWA+A+KFPAQE+MT V+ +EFQVGRTGA+TPVARLEPV V+GV VSNATLHN D Sbjct: 309 VSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNFD 368 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R +R+GD V++RRAGDVIP+VV +L++RP+ + + P+ CPVC ++V + EGEA Sbjct: 369 ELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGEA 428 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 VARC GGL C AQ +ES+KHF SRRA+D++G+GDK+++ ++++ + +++L + Sbjct: 429 VARCVGGLYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKSAI 488 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 T L RMG KSA+N++ A+EK+K+TT RFLYALGIR VG+ TA LA +F L+ L AS Sbjct: 489 TALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMKAS 548 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 IE LQ++ D+G V A ++H FF ++ N +I++L+ GVHWP + S AGKT Sbjct: 549 IETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGVHWPQEK----AVVKSEIAGKT 604 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VLTG+L ++R++A+ ++ G K SVSK TD VI GE GSK KA+ LGI +IDE Sbjct: 605 FVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLIDE 664 Query: 663 AEMLRLLGS 671 L+LL S Sbjct: 665 EAFLKLLKS 673 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 865 bits (2236), Expect = 0.0, Method: Composition-based stats. Identities = 375/670 (55%), Positives = 476/670 (71%), Gaps = 4/670 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + LR+ L H Y Y+V+D P +PDAEYD+L REL+ LE HPEL+ DSPTQRV Sbjct: 26 DPSARAAWLRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFDSPTQRV 85 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA L AF + H VPMLSL N F++E LAF+KRV + L + E+V + ELK DGLA++ Sbjct: 86 GALALTAFPPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATELKFDGLAIN 145 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YE+GVLV AATRGDG TGE++T+N+RT+RAIPL+LH N P L+VRGEV + +A Sbjct: 146 LRYEDGVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMMYKADLA 205 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N R G K FANPRNAAAGSLRQLD RITA+R L FF YG+G+LEG ++P +H Sbjct: 206 KLNARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMPASHSAL 265 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + + G+PV + + +L FY E RP L ++IDGVV KVN + QQ QLGF Sbjct: 266 LDWYAELGIPVCSERAVVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNRVDQQLQLGF 325 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 V+RAPR+A+A KFPA+E +T V+D+E QVGRTGAITPVARL PV V GV V+NATLHN D Sbjct: 326 VSRAPRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTNATLHNED 385 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R ++IGD V++RRAGDVIP+VV V RP R + P+ CPVCGS + R+E EA Sbjct: 386 EVRRKDIQIGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGSPIVRLEDEA 445 Query: 423 VARCTGGL-ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 +ARC+GG C AQRK L HFVSRRAMDV+G+GD++++QLV+K + T ADL+KL Sbjct: 446 IARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADLYKLGFRA 505 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+RM KSAQNV++ALEK+K TT ARF+YALGIR VGEATA LA +FG L+AL A Sbjct: 506 LAELDRMADKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHFGNLDALLQA 565 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 S E+L +V D+G VVA+ + FF + N +I +L A GV WP +V E P AGK Sbjct: 566 SPEQLLEVADIGPVVAASITAFFTDAMNIELIEQLRAAGVTWPEHVV---ENRPRPLAGK 622 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T VLTG+L +SRD A ++ G KVAGSVSKKT V+AG AGSKLAKA+ELG+ ++D Sbjct: 623 TFVLTGTLPTLSRDAAAEKIEAAGGKVAGSVSKKTSYVVAGAEAGSKLAKAEELGVTILD 682 Query: 662 EAEMLRLLGS 671 E +L+LL S Sbjct: 683 ETGLLQLLDS 692 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 865 bits (2235), Expect = 0.0, Method: Composition-based stats. Identities = 391/670 (58%), Positives = 499/670 (74%), Gaps = 5/670 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I+++L LR T+ H Y Y+ +D P IPDAEYDRLMR LRE+E + P+ ITPDSPTQRV Sbjct: 7 AIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 GAAP F + H +PMLSLDN F+E+ L F++RV++RLK E + +CCE KLDG+A Sbjct: 67 GAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDGIA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+LY +G LV TRGDG+ GEDIT+NV+T++ IPLKL GE PA LEVRGE++LP+A Sbjct: 127 ISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPKAA 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+ IN+DA G K F NPRNAAAGSLRQLDPRITAKR L CY VG EG ELP T Sbjct: 187 FDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEG-ELPGTQH 245 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q ++WGL ++ ++ L A+E L +Y + R L ++IDGVV KVN + Q++L Sbjct: 246 DILTQLQQWGLKINSQMKLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDLQQEL 305 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+RAPRWA+A KFPA E+MT + V+FQVGRTGA+TPVARL+PV V GV VSNATLHN Sbjct: 306 GFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNATLHN 365 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI RL + IGD V+IRRAGDVIPQVV+VV RPE+ V P HCPVCGSDV ++EG Sbjct: 366 MDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENAVPVDRPEHCPVCGSDVLQLEG 425 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAVARC+GGL C AQRKE++KHF SR+AMD+DG+GD++++ LVEKE + +PA L+ L A Sbjct: 426 EAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSPASLYSLKAP 485 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GLERMG KSAQN++NA+E +K+TTFARF+YALGIREVGEATA LA +F TL+ L+ Sbjct: 486 DVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGIREVGEATAKVLAQHFPTLDLLKQ 545 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+ E+L + PD+G + A H+ +FF +E N I LL +GV WP +V + E + P +G Sbjct: 546 ATEEDLVEAPDIGPISAGHIRSFFQQEHNLETIDALLNQGVSWPEVVVRSTETL--PLSG 603 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 +T V+TG L+ SRD+AK L LGAKV+GSVS KT V+AGE AGSKL KAQ+LG++V+ Sbjct: 604 QTAVVTGVLADYSRDEAKDLLTRLGAKVSGSVSAKTGFVVAGEKAGSKLTKAQDLGVKVL 663 Query: 661 DEAEMLRLLG 670 DE +LL Sbjct: 664 DEDAFKQLLE 673 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 863 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 308/669 (46%), Positives = 416/669 (62%), Gaps = 11/669 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++++ LR + +H Y Y+V+D+PEI D EYD+L REL LE + PE ITPDSPTQR Sbjct: 4 EEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F+ + HEVPMLSLDN F E+ AF++RV+ L V + CE KLDGLAV Sbjct: 64 VGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSALNQQH-VEYFCEHKLDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LYENG+ V +TRG+G GED+T+N++TI+ IPL+L GENIP +E+RGE F+ F Sbjct: 123 SLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLRDF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E +NE + G +FANPRNAAAGS+RQLD ITA+R L F YG G+++G + +T Sbjct: 183 EALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMD-FETQER 241 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L Q ++WG +++ S EE L F E R L F DGVVIKVN+L + LG Sbjct: 242 FLKQCQEWGFRINEHNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWDILG 301 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A APR+A+A+KFPA+E+ T ++DV FQVGRTG ITPVA LEPV + G VS ATLHN Sbjct: 302 TTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLHNF 361 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D + +L +R GD V ++RAG VIP+++ V +R ++ PT CPVCG E Sbjct: 362 DIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEW--DG 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ K L H+ SR AMD+DG+G+ II+ LV+ V ADL+KL+ Sbjct: 420 AYLKCVN-ITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQD 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L R+ +SA + ++++K+ F R LY LGI VG TA LA +FG++ AL A Sbjct: 479 LLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +++EL + +G A + +I +L G+ E I+ P G Sbjct: 539 TMDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLKM------EQESIEGPLKGL 592 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V TG+L+ MSR DA + LG KVA SVSK D V+ GE GSKL KAQ+LG+ +ID Sbjct: 593 TFVFTGTLTSMSRGDAAKLVQSLGGKVASSVSKNVDYVVVGEDPGSKLDKAQKLGLTIID 652 Query: 662 EAEMLRLLG 670 E L+++ Sbjct: 653 EEAFLKMVK 661 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 428/697 (61%), Positives = 540/697 (77%), Gaps = 29/697 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+S+ +++ +LR L+HHEYLYHV DAPEI DAEYD L+ +LRE E+++PEL+ PDSPTQ Sbjct: 1 MKSMLEKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN---------------- 104 +VGA+P AF + H+VPMLSLDNVFDE+ FLAFNKRV +RL+ Sbjct: 61 KVGASPSTAFKPVTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDS 120 Query: 105 ----------NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 154 E +T+CCELKLDGLAVS++YE G L AATRG+G GE+IT N+RTI++ Sbjct: 121 DQKNRSEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQS 180 Query: 155 IPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRI 214 IPL+L G+ +P R+E+RGEV++PQAGFEK+N+ AR K+F+NPRNAAAGSLRQLDP I Sbjct: 181 IPLRLKGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHI 240 Query: 215 TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE 274 TA+RPL FFCYGVG+LEGG LP +H+ RL+Q K WGLPV DR+TLC AE+V+AFY ++ Sbjct: 241 TAQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRITLCTGAEQVMAFYQEIA 300 Query: 275 EDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT 334 + R TLGFDIDG+VIKV+ + QE+LGF+A+APRWA AFKFPAQE+ T V VEFQVGRT Sbjct: 301 QARATLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGRT 360 Query: 335 GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE 394 GA+TPVARLEPV + G LVSNA LHNADEI RLGLRIGD VV+RRAGDVIPQ+VNV++ Sbjct: 361 GALTPVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIES 420 Query: 395 RPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGM 454 RP++T E++FP HCP+C S +R+EGEAV RCTGGL C AQRKE+LKHFV+RRA+D++G+ Sbjct: 421 RPQNTVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVARRALDIEGL 480 Query: 455 GDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYA 514 GDKII QLV+K+YV PADLF LT+ KL L+RM KSAQN++N+L+K+++TTFARFLYA Sbjct: 481 GDKIIHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKTTFARFLYA 540 Query: 515 LGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVIS 574 LGIREVGE TAA LA YFG L+ L A IE L+KVPDVG VVA ++ +FF E ++ VIS Sbjct: 541 LGIREVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGNEHHQQVIS 600 Query: 575 ELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 L + P E+ + PF KTVVLTGSL+ +RDD KA L+ LGAKV+GSVSK Sbjct: 601 ALESVLDW---PDPEPIEKPNHPFRDKTVVLTGSLNAFTRDDLKAHLISLGAKVSGSVSK 657 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 KTD +IAGE GSK KA++ GI++++E E++ L + Sbjct: 658 KTDFLIAGENPGSKAQKAEKSGIKIMNEPELIEFLKA 694 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 853 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 322/686 (46%), Positives = 436/686 (63%), Gaps = 18/686 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + +++ LR +R+H Y Y+V+D P I DAEYD LMRELR LE HPEL+TPDSPTQR Sbjct: 4 DHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P F++++H VPMLSL N DE A+ RV L N+ +V + E K+DGLAV Sbjct: 64 VGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDGLAV 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---------------GENIPA 166 +++Y NG+LV ATRGDG TGED+T+N+RTI IPL+L IP Sbjct: 124 TLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAVIPP 183 Query: 167 RLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYG 226 +EVRGEV++ A F ++NE +G KV ANPRNAAAGSLRQ DP ITA+RPL FF YG Sbjct: 184 LIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFFAYG 243 Query: 227 VGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDG 286 +G +EG ++ T L + G PV+ E ++ LA+ + R L +++DG Sbjct: 244 IGQIEGVQV-QTQWETLNLLRTLGFPVNRDARRFERLDDALAYCREWMTRRDELEYEVDG 302 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 VVIK++SLAQQ QLG V R PRWA+AFKFPA+E ++ + D+ VGRTG ITP A +EPV Sbjct: 303 VVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVIEPV 362 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 ++ GV V NA+LHNAD I +RIGD V+++RAGDVIP +V +++ R R P Sbjct: 363 NIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQMPA 422 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CP CG+ +ER EGE RC IC AQ ++HFVSR AMD+ G+G+K + VE+ Sbjct: 423 TCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFVERG 482 Query: 467 YVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 +V ADL+ LT +E GPK N+++A+ +K R + LGIR VGE A Sbjct: 483 WVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEVVAQ 542 Query: 527 GLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 LA +FG+L+AL AAS +E+ + +G +A+ V +FA ++ +I++L GV A Sbjct: 543 ILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGVRTEAQ 602 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA- 645 A ++ AGKT V+TG+L MSR++A A + G KV+GSVSKKTD ++ G Sbjct: 603 ETARASRGNA-LAGKTFVITGTLPSMSREEASALITAHGGKVSGSVSKKTDYLVIGAEPG 661 Query: 646 GSKLAKAQELGIEVIDEAEMLRLLGS 671 G+K AKAQELGI +IDEA +L L+GS Sbjct: 662 GTKFAKAQELGIPMIDEAGLLALIGS 687 >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 323/671 (48%), Positives = 439/671 (65%), Gaps = 8/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++Q++ ELR L Y YHV+D P + DAEYDR M+EL +LET++PE IT DSP+ R Sbjct: 4 EAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSPSVR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A L F ++ H+ PMLSL N F+E F++RV+ + V + CELK+DGLAV Sbjct: 64 VGGAVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDGV-NVRYICELKIDGLAV 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YE G + +TRGDG TGEDIT N++TI+AIPL+L E LEVRGE ++P+ F Sbjct: 123 SLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEE---VTLEVRGEAYMPKRSF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 K+NE+ + G VFANPRNAAAGSLRQLDP+I AKR L+ F YG+ +EG + +H Sbjct: 180 VKLNEEKEQNGEAVFANPRNAAAGSLRQLDPKIAAKRNLSMFVYGLADIEGKTIT-SHSE 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G + +CE+ EEV+A+ + +E RP L ++IDG+VIKV+ + QE+LG Sbjct: 239 ALDFLGELGFKTNPNRRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVTLQERLG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A++PRWA+A+KFPA+E +T + +E VGRTG +TP A LEPV VAG +V A+LHN Sbjct: 299 TTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +RIGD VV+++AGD+IP+VVNVV +R PTHCP C S + R+E E Sbjct: 359 DLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGLVRLEEE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C AQ +E L HFVSR AM++DG+G+++I QL E Y+ T ADL+ LT + Sbjct: 419 VALRCINP-ACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADLYGLTKDQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+R G KSA N+V A+E +KE + R L+ LGIR VG A LA +F T++ L A Sbjct: 478 LLQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFETMDNLVKA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA--EEIDSPFA 599 EEL+ + ++G +A + +F E ++I + GV+ + A + I S FA Sbjct: 538 GEEELKAINEIGEKMAQSIVTYFDNEDVLHLIQQFKDYGVNMTYKGIKRADLQNIASYFA 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKTVVLTG L M R +AK ++ LG KV GSVSK TDLVIAGEAAGSKLA+A++ IE+ Sbjct: 598 GKTVVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVIAGEAAGSKLAQAEKHNIEI 657 Query: 660 IDEAEMLRLLG 670 +E L+ L Sbjct: 658 WNEERFLQELN 668 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 337/674 (50%), Positives = 451/674 (66%), Gaps = 10/674 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + EL L HH Y Y+V+D+PE+ DA+YD+LMREL++LE KHP L TPDSPTQ Sbjct: 4 FQKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQ 63 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG A F ++ H PM+SL N+F+++ F++R++ L + + CE KLDGLA Sbjct: 64 RVGGAAAEEFGEVVHRAPMISLANIFEDQGLTEFDERIRK-LVGLPGIAYVCEPKLDGLA 122 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 +++ YE G V ATRGDGTTGED+TSN+RTIR++P+ L ++ +P LEVRGEVF+ Sbjct: 123 IALRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDDVKVPDVLEVRGEVFIR 182 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + F+K+NE G +FANPRNAAAGSLRQLDPR+TA RPL+ F Y EG + Sbjct: 183 KKDFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPVFK 242 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 TH+ +L K GLP++ E E V Y + R L F++DG+V+KV+ Q+ Sbjct: 243 THIEKLEYLKTLGLPINQY-RRAEGLEGVRQAYDASLKGRHELPFEVDGMVVKVDDEDQR 301 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 ++LG V+++PRWAVA+KFP +E+ T V D+ QVGRTGA+TPVA L+PV V GV V+ AT Sbjct: 302 KRLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARAT 361 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE+ R +R GD V +RRAGDVIP++V+VVLS+RP D+ FP HCPVC + + Sbjct: 362 LHNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVLSKRPADSAPFEFPKHCPVCDAVATK 421 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 E A+ RCT G C AQ E ++HF SR AMD++G+GDK+ QLV V ADL+ L Sbjct: 422 DEDGAIIRCT-GASCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYAL 480 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T L LERMG KSA N++ +LE++K+TT RFLY+LGIR VG+ATA LA F E Sbjct: 481 TKEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEM 540 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L AS+E++ +V DVG ++A +H FF E N+ I LLA GV AP P Sbjct: 541 LFEASLEDISRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAP----QVATGGP 596 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGI 657 F GK+VVLTG+++ M+R+ AK + G KVAGSVS+KTD V+AGE AGSKL KAQELG+ Sbjct: 597 FVGKSVVLTGAMTGMTREQAKEEVERRGGKVAGSVSRKTDFVVAGEDAGSKLKKAQELGV 656 Query: 658 EVIDEAEMLRLLGS 671 ++DE L++L + Sbjct: 657 RILDEQAFLQMLQT 670 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 846 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 357/684 (52%), Positives = 463/684 (67%), Gaps = 18/684 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S+ +++ LR L H + Y+V+D P IPDAEYDRL +EL+ LE HPEL+TPDSPTQRV Sbjct: 19 SVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPELLTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRLK---NNEKVTWCCELKLD 117 G PL F+ +RH +PMLS+ D E+ F+ RV+ L ++ V + ELK D Sbjct: 79 GGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESDPPVEYVAELKFD 138 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLA+S+ YENGVLV AATRGDG GED+T N+RTIR IPL+L + P +EVRGEV++ Sbjct: 139 GLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPP-VMEVRGEVYMR 197 Query: 178 QAGFEKINEDARRT------GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL- 230 + FE +NE R G K F NPRNAAAG +RQLDP A+R L+FF YGVG + Sbjct: 198 RDEFEALNERQREKIAKGAKGEKTFVNPRNAAAGGVRQLDPAFAAERRLSFFAYGVGEIT 257 Query: 231 ---EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGV 287 EGG + +TH L K W PV+ + L A E++AF+ + R L +DIDGV Sbjct: 258 PPEEGGPVFETHFELLQTLKSWCFPVAAQTRLAYGAPELIAFHEAIGRQRDQLPYDIDGV 317 Query: 288 VIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVH 347 V KVNSLA Q ++GFV+R PRWAVA K+PAQEQ+T V ++ QVGRTG +TPVA+L PV Sbjct: 318 VYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTGKLTPVAKLAPVF 377 Query: 348 VAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH 407 V GV V+NATLHN DE R +R+GD V++RRAGDVIP+VV+V+L +R +D + P Sbjct: 378 VGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRVQDAPQFSMPRQ 437 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CPVCGSD R EGEA RCTGGL C AQRKE++ H+ +RA++++G+GDK+++QLV+ Sbjct: 438 CPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLGDKLVEQLVDTGV 497 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 + T DL++L L L+RM KSA N+V ALEK+K+TT RF++ LGIR VGEATA Sbjct: 498 IRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGLGIRHVGEATAKA 557 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 LA +FG L+++ AS E+L +V DVG +VA + FF + NR V+ +L A GV W Sbjct: 558 LARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQLRACGVTW--EE 615 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 A P +GKT V+TG+L +SRDDAK R+ G KVAGSVSKKTD V+AG AGS Sbjct: 616 GAPAAVAPKPLSGKTFVITGTLPGLSRDDAKDRIEAAGGKVAGSVSKKTDYVVAGLDAGS 675 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 KL KA+ LG+ VIDEA +L LL S Sbjct: 676 KLVKAEALGVAVIDEATLLALLDS 699 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 311/678 (45%), Positives = 433/678 (63%), Gaps = 11/678 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + T+L +R H+ Y+V P I D YDRL EL +LE K P+LIT DSP+QR Sbjct: 4 NEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSPSQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V PL F + H PM+SLDN + ++ F RVQ L N E + W E K+DG+A+ Sbjct: 64 VSGEPLKEFKPVHHLSPMMSLDNTYSQQDVRDFVGRVQRLLPN-ETLEWILEPKVDGVAI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--GENIPARLEVRGEVFLPQA 179 ++ YE GV V ATRGDGTTG+D+TSN++TIR+I KL G +P +E+RGEV+LP+A Sbjct: 123 NLKYEKGVFVCGATRGDGTTGDDVTSNLKTIRSIAGKLKASGRKLPDVVEIRGEVYLPKA 182 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + G + FANPRN+AAGSL+QLDPRI AKRPL YG+GV EG E P H Sbjct: 183 AFTKINAERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGAERPKEH 242 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L K G ++ C SA+E++ +++++ R ++ DG VIK+NS A +E+ Sbjct: 243 DEVLAWLKSAGCKTPEKTWKCCSADELIDAINELDQLRRKFTYETDGAVIKLNSFALRER 302 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 +GF ++APRWA+A+K+ A++ T ++ + QVGRTGA+TPVA LEPV +AG +S ATLH Sbjct: 303 IGFTSKAPRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGSTISRATLH 362 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DE+ R +R+GD V I +AG+VIP VV VVL++R + FPTHCP CGS V R E Sbjct: 363 NEDELRRKDIRVGDTVTIEKAGEVIPAVVGVVLTKRTGKEVQFQFPTHCPECGSKVARTE 422 Query: 420 G------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 G V RC C AQ + ++H+ +R AMD++G G+ ++ QLV K V +D Sbjct: 423 GTENGAAGVVWRCLNA-ACPAQIRGRIEHWCARGAMDIEGGGEALVSQLVTKGLVREVSD 481 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L+ LT ++ GLERMG KSAQN ++ ++ +K R L+ LGI VG A L F Sbjct: 482 LYSLTLDQVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILHVGAGVAKRLGRRFT 541 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 TL+ + AAS E+L +V D+G V+A + + E NR +I L G+++ + + A Sbjct: 542 TLDDIFAASQEQLTEVEDIGEVIAHSIVQWHQEPKNRELIELLRKAGLNFNSELYKPAAA 601 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + FAGKT VLTG+L + R++A A++ LG KV+GSVSKKTD ++AGE AGSKL KAQ Sbjct: 602 LGH-FAGKTFVLTGTLPTLKREEAAAKIEALGGKVSGSVSKKTDYIVAGEDAGSKLEKAQ 660 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LG+++IDEA L+L + Sbjct: 661 KLGVKIIDEAAFLKLCAN 678 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 317/671 (47%), Positives = 422/671 (62%), Gaps = 4/671 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++++T LR L H +LY++ DAPEI DAEYDRL REL ELE HP+L P SPT RV Sbjct: 9 EAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPASPTARV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + + +PMLS+ N F +E F++RV+ L+ + VT+ E KLDG AV Sbjct: 69 GAPPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLDGTAVE 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP--ARLEVRGEVFLPQAG 180 ++YE G LV AATRGDG TGE IT N RTI ++PL L G+ +P LEVRGEV + + G Sbjct: 129 LVYEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVVMTKEG 188 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEK+N +FAN RNAAAGSLRQLD R+TA RPLT YG+G + T Sbjct: 189 FEKLNALRLERDEPLFANARNAAAGSLRQLDSRVTASRPLTLIAYGIGRFSEIDAISTQH 248 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + +G + V + V+ FY +E RP+L +DIDG+V+KV+ L Q L Sbjct: 249 EIVTRLADFGFKTNSHVRWDLDIKGVIDFYRFLEGIRPSLPYDIDGMVVKVDRLDFQRTL 308 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +R+PRW +A+KF A ++ T + ++ QVGRTGA+TPVA LEPV + GV VS ATLHN Sbjct: 309 GATSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVSRATLHN 368 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI R +R+GD V+++RAGDVIP+VV V+ R + P CPVCG+ V R Sbjct: 369 EDEIARKDIRVGDAVLVQRAGDVIPEVVQVITGRRTGNETPFQMPATCPVCGTPVVREPS 428 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAV RC C AQ KE +KHF ++ A D+DG+GDK++DQLV++ + + ADLF L Sbjct: 429 EAVTRCVNA-ACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADLFTLRVE 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG KSAQN+V A+EK++ TF FLY LG+R VG A LA F ++ L Sbjct: 488 DLESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGMRHVGAHVATLLARAFPGIDQLAE 547 Query: 541 ASIE-ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A++ +L + +G V+A V NFF+ NR + L+ GV P A + P A Sbjct: 548 AALAGQLNSIDGIGGVIAESVKNFFSNPENRQTVDSLINHGVALQFPEKEAATGHEMPLA 607 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT VLTG+L +M+RD A+ R+ G KV GSVS +TD V+AGEA GSK KA+ LG+ + Sbjct: 608 GKTFVLTGTLEKMTRDQARQRIEAAGGKVTGSVSSRTDYVVAGEAPGSKRDKAEALGVAI 667 Query: 660 IDEAEMLRLLG 670 +DEA +L LL Sbjct: 668 LDEAGLLSLLE 678 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 311/670 (46%), Positives = 435/670 (64%), Gaps = 10/670 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 IE+++ ELR L +H + Y+V DAPEI D EYD L REL +LE + P+LITPDSPTQR+ Sbjct: 2 DIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRI 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PL F ++ H V M SL +VF E LAF++RV++ + + V + E K+DGL+VS Sbjct: 62 GGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVG--DDVEYVVEKKIDGLSVS 119 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YENGV ATRGDG GED+T N++TIR IPL+L + LEVRGEVF+ + F Sbjct: 120 LVYENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLKRDLP--LLEVRGEVFISKKDFI 177 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 KINE+ G ++FANPRNAAAGSLRQLDP++T++R L F + + +EG + TH Sbjct: 178 KINEEQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEG-QSFKTHSET 236 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L K+ G S +C+ V +++ E+R + F+IDG V+KVNSL Q+E LG Sbjct: 237 LEFLKELGFKTSPGYKVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGS 296 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +APRWAVA+K+PA+ + T V+ + VGRTG +TP+A +PV +AG VS ATLHN D Sbjct: 297 TIKAPRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMD 356 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I+ +RIGD V IR+AGD+IP+VV+VV +R + E P CPVCG+DV R EGEA Sbjct: 357 YIKEKDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEA 416 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK- 481 RCT G+ C AQ + HF SR AM+++G+G II+ L+EK + ADL+ L K Sbjct: 417 AYRCT-GIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKE 475 Query: 482 -LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L +ERMG KS +N++ ++EK+K+ R ++ GIR +G A L+ F +L+AL Sbjct: 476 TLVNIERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMN 535 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 AS E++ +P+ G +A V FF ++ NR+ + +L A GV+ + + D+ F G Sbjct: 536 ASAEDIMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVNTVS--FGKKKIKDNRFEG 593 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT VLTG+L +R +A+ + G K +GSVSKKTD V+AGE AGSKL KA+ELGIE+I Sbjct: 594 KTFVLTGTLPSFTRKEAEEIIKSFGGKTSGSVSKKTDYVLAGEDAGSKLQKAKELGIEII 653 Query: 661 DEAEMLRLLG 670 DE + +++ Sbjct: 654 DEDKFRKMIE 663 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 316/670 (47%), Positives = 441/670 (65%), Gaps = 9/670 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES + + +L+ + +H Y+ +D PEI DAEYD L++EL LE + P+ +T DSP++R Sbjct: 5 ESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSPSRR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GAAPL+ F+ H PMLSL N F EE L F++R++ L ++E++++ E K+DG+AV Sbjct: 65 IGAAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDGVAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH---GENIPARLEVRGEVFLPQ 178 +++Y +GVL + ATRGDG GED+T N+RT+ IPLK+ E +P ++E+RGE+++ Sbjct: 125 NLIYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIYMET 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 A F K+NE G FANPRNAAAGSLRQLD ITA+RPL FCY VG++ G Sbjct: 185 AAFRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRG-RAFTY 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H L KKWG V+ + E E+ + FY ++++ R L ++IDG+VIKV+ L+ Q Sbjct: 244 HHDVLHALKKWGFSVNPFIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLSLQT 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG V+R+PRWAVA KF A + T +RD+ VGRTG +TPVA + PV V GV VS ATL Sbjct: 304 RLGAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSRATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI++ +RIGD V+++RAGDVIP+VV V++S R P CP CGS+V R+ Sbjct: 364 HNQDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIVSNRSGREIPFKIPDTCPECGSEVVRL 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 GEA RC GL C AQ + ++HFVSR MD++G+GDK++ QLV ++ +H PADL+ L+ Sbjct: 424 AGEAAHRCI-GLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHDPADLYYLS 482 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L LERM KS N+++A+E +K + + ++ALGIR VGE + LA F TL+AL Sbjct: 483 HDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILARRFRTLDAL 542 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 + EL + D+G V+S + FF SNR VI +L GV I + P Sbjct: 543 INTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGVSPLETISPRSA----PL 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 GKT V TG+LS+M+RD+AK + LG + AG+V+KKTD V+AGEAAGSKL KAQ+ GI Sbjct: 599 TGKTFVFTGALSRMTRDEAKQIVESLGGQAAGTVTKKTDYVVAGEAAGSKLQKAQKAGIA 658 Query: 659 VIDEAEMLRL 668 ++ E E LRL Sbjct: 659 ILSEEEFLRL 668 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 836 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 302/668 (45%), Positives = 408/668 (61%), Gaps = 9/668 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + Q++ ELR + H Y Y+V+D P I D EYD LM+EL LE +PEL TPDSP+QRV Sbjct: 5 AARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSPSQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G AP F+Q+RH +LSL++ F+E L F++RV+D V + E K+DGLAV+ Sbjct: 65 GGAPREEFNQVRHPQVLLSLNDAFNEGDLLEFDRRVRDLAGR--PVEYVIEAKIDGLAVA 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y +G+ ATRGDG GE++T+N++TI A L L L VRGEV++P+ F Sbjct: 123 LTYRDGLFTLGATRGDGQVGEEVTANLKTIPA--LPLRLRRPLPFLVVRGEVYMPKVAFT 180 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N G +FANPRNAAAGSLRQLDP+ITA R L+ F Y V L G E+ T G Sbjct: 181 ALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVYQVISLTGAEVA-TQAGA 239 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G PV+ + + VL E R +L ++IDG+VIKVN LA LG Sbjct: 240 LDFLAELGFPVNPYRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVNDLALHSVLG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A+APRWA+A+KFPA++ V + +VGRTG +TP A L PV +AG VS ATLHN Sbjct: 300 ATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTTVSRATLHNE 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +RIGD V++++AGD+IP+VV V+ R P CP CG+ V R GE Sbjct: 360 DYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACGAAVVRPPGE 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A RCTGGL C AQ E + HF SR AMD+ G+G I+ QL+E +H ADL+ L Sbjct: 420 AAHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIHDAADLYYLKEED 479 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LER G +SA N++ A+ +K+ R ++ALGIR VG+ A LA +FG+L+ L AA Sbjct: 480 LLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLADHFGSLDKLAAA 539 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 ++EEL +PD+G +A ++ FF E NR V+ +L GV +NA P GK Sbjct: 540 TVEELTALPDIGPRIAENIREFFGEPRNRAVLEKLKKAGVRL---EALNAAAPAGPLTGK 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 VLTG+L M+R +A+ + G KV+ SVS+KTD V+AGE GSKL +A+ELG+ VI+ Sbjct: 597 VFVLTGTLPGMTRQEAEELITRAGGKVSSSVSRKTDYVVAGEKPGSKLDRARELGVPVIN 656 Query: 662 EAEMLRLL 669 + +LL Sbjct: 657 ADGLRQLL 664 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 834 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 322/663 (48%), Positives = 439/663 (66%), Gaps = 6/663 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L Y+ D+P + DAEYD +RELR LE ++P+ + DSPTQRVGAA Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P+ F ++ + +P+ SLDNVFD++ F + RVQ L E V E K DGL+V+I Y Sbjct: 70 PVEVFGEVHYAIPLTSLDNVFDQDGFSDWLARVQKGLGR-EDVPLSAEPKFDGLSVNIRY 128 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 G LV A TRGDG TGED+T+NVRTIR +PL+L G++ P LEVRGEV +P A F ++N Sbjct: 129 IEGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAFRRLN 188 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + R G FANPRNAAAGSLRQLD +TAKRPL +F +G G +H+ + + Sbjct: 189 GERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGESSVPLG-KSHIAVMER 247 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 WG V+ + E ++ ++++ R + F+IDG+V KV+ L +EQLGF AR Sbjct: 248 LSAWGFEVTSYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFKVDDLLAREQLGFTAR 307 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KFPA E+ T V D+ VGRTG ITPVA L+PV V GV VS A+LHN DE++ Sbjct: 308 APRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLHNQDEVD 367 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R+GD V++RRAGDVIP+VV V+ ERP T+ P CPVCGS+V R+ E+ R Sbjct: 368 RKDIRVGDTVLVRRAGDVIPEVVMVIKEERPPATQPWHMPQRCPVCGSEVLRLANESAHR 427 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C GGL C AQR +++HF SRRAMD+ G+G+K+++QLV VHT AD++ L L GL Sbjct: 428 CMGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDEAALCGL 487 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 ERM +SAQ ++ +++++ T+ RFLYALGIR+VGE TA LA YFG L+ L AA+ E Sbjct: 488 ERMASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYFGDLDPLMAATPEL 547 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 LQ +PDVG +VA V +FFA+ NR+VI+ L A GV W + + F G T+VL Sbjct: 548 LQNIPDVGPIVAESVAHFFAQPHNRDVIAALRAAGVQW----AVVQPQKGGRFQGMTLVL 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG+L M+R++AK + G KV+GSVS KT V+ G+ GSK KA +LG++ + EA+ Sbjct: 604 TGALDNMTREEAKTAIENAGGKVSGSVSAKTSYVVVGKDPGSKAEKAAKLGVKQLTEAQF 663 Query: 666 LRL 668 L + Sbjct: 664 LAM 666 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 342/701 (48%), Positives = 458/701 (65%), Gaps = 34/701 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +Q++ +LR + H+Y Y+V+D P I DAEYD L REL+ LE +P+L++ DSPTQR Sbjct: 9 EQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSDSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V F + H+ PMLSLDN F+ + + F++R++DRL V + E KLDG+++ Sbjct: 69 VAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRLG-VASVVYTGEPKLDGISL 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y++G LV A TRGDG TGED+T+NVRT+R++PL+L G+ P RLEVRGEV + + F Sbjct: 128 SLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIRKEDF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N+ G + FANPRNAAAGSLRQLDPRITA+RPLT F +GVG ++H Sbjct: 188 ERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDP-LALGVESHWQ 246 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L WG + + E A+ ++ E+R L F+IDG V KV+ LA +EQLG Sbjct: 247 VLECLAGWGFRTTAPLEHLEGVSACQAYRDRLIEERDALPFEIDGAVFKVDDLAVREQLG 306 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F ARAPRWA+AFK PA+E T V + VGRTG ITP+ARL+PV V+GV V+ A+LHNA Sbjct: 307 FTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARASLHNA 366 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH---CPVCGSDVERV 418 DE+ R+ +R GD V++RRAGDVIPQ+ +VVL++RPE + F CP CGS V+R+ Sbjct: 367 DELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGSAVQRI 426 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGEA RC GGL C AQR+ ++ HF SRRA+D+DG+G+KI++QLV K V ADLF+L Sbjct: 427 EGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLADLFRLG 486 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA-YFGTLEA 537 +L GLERMG KSA N++ AL++A+ TT ARFLYALGI VGE TA LA +G + A Sbjct: 487 HAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIPHVGEVTARRLAEAAYGLMVA 546 Query: 538 ----------------------------LEAASIEELQKVPDVGIVVASHVHNFFAEESN 569 + AA ++L+ + DVG VVA + FFAE N Sbjct: 547 VPRGDRAALRAAAGLDAQTAITSEALLRVMAAPADDLEAIEDVGPVVARAIAGFFAEPHN 606 Query: 570 RNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVA 629 R V+ L A GVHWP P E S AG+ V+TG+L M+RD+AKA + G +V Sbjct: 607 RQVVDHLCAAGVHWPEPDPPEQAESVSSLAGRAFVVTGTLETMTRDEAKAAIEACGGRVT 666 Query: 630 GSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 GSVS+KTD ++AG AGSKL KA+ELG+EV++E+ + LL Sbjct: 667 GSVSRKTDYLVAGADAGSKLNKARELGVEVVNESGLRELLA 707 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 374/729 (51%), Positives = 473/729 (64%), Gaps = 66/729 (9%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ LR L + Y+V+D PE+ DAEYDRL REL+++E +HP+ ITPDSPTQRVG Sbjct: 16 ERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHPDFITPDSPTQRVGGE 75 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-------NNEKVTWCCELKLDG 118 F+ + H+ PMLSL+N F +E AF+KRV D L E V + CELK DG Sbjct: 76 AADGFTPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAGTAEPVEYACELKFDG 135 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LA+S+ Y +G AATRGDGTTGED+T NVRTI++IPL L G++ PA L+VRGEV + + Sbjct: 136 LAISLRYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKHPPALLDVRGEVLMYK 195 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F ++NE R + FANPRNAAAGSLRQLD ++TA+RPL+FF YG+GVL+G +PDT Sbjct: 196 RDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKVTAQRPLSFFAYGIGVLDGAPMPDT 255 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H G L ++ GLPV+ + + AE +L F+ KV E R L +DIDGVV KVN +Q+ Sbjct: 256 HSGLLDWYESLGLPVNRERAVVQGAEGLLDFFRKVGEKREALPYDIDGVVYKVNRRDEQD 315 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LGFV+RAPR+A+A KFPAQE T + +E QVGRTGAITPVARLEPV V G V+NATL Sbjct: 316 RLGFVSRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVARLEPVFVGGATVTNATL 375 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVN----------------------------- 389 HN DE+ R +R+GD V++RRAGDVIP+VV Sbjct: 376 HNEDEVRRKDIRVGDTVIVRRAGDVIPEVVGRDGPHAMQVRVRFRGVRTVARRNRLRAAA 435 Query: 390 -----VVLSER---PEDTREVVFPTHC--------------------PVCGSDVERVEGE 421 + R P D R + C PVCGS +ER+ E Sbjct: 436 SSGRPMTWKPRLLKPTDRRGIRVRRGCLRPSLFEFVEQEPFRMPTECPVCGSRIERLPDE 495 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ARCTGGL C AQRK++L HF RRA+D+DG+G+KIIDQLVE+ V TPADLF L Sbjct: 496 AIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLFHLGFAT 555 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+R KSAQN++++LEKA+ TT ARF+YALGIR VGE+TA LA +FG L+ + A Sbjct: 556 LAALDRFAEKSAQNLLDSLEKARHTTLARFIYALGIRHVGESTAKDLAKHFGALQPIMDA 615 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 SI+ L +V DVG VVA +H FFAEE NR VI++L + P + AGK Sbjct: 616 SIDALLEVNDVGPVVAESLHQFFAEEHNRTVIAQLREKVDWPEGPPAPREPQ--GVLAGK 673 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVVLTG+L +SRD+AKA L GAKV GSVSKKTD V+AG AGSKLAKA+ELGI V+D Sbjct: 674 TVVLTGTLPTLSRDEAKALLEAAGAKVTGSVSKKTDYVVAGAEAGSKLAKAEELGIPVLD 733 Query: 662 EAEMLRLLG 670 E M +LL Sbjct: 734 EDGMHQLLK 742 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 311/669 (46%), Positives = 423/669 (63%), Gaps = 11/669 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 Q++ ELR +R+H Y+V DAPEI DAEYD L REL ELE++ PEL+TPDSPTQRV Sbjct: 19 EARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQRV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 G PL F ++RH VPMLSL N E ++ RV+ L E+ + + ELK+DGLA Sbjct: 79 GGEPLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGLA 138 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ YENG LV ATRG+G GED+T +RTIR++P +L ++ P LE RGEV++ Sbjct: 139 VSLRYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLD-DDPPGVLEPRGEVYIKLKD 197 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE+ N + G + FANPRN AAGS+RQLDPR+TA+RPLT + YGVG EG E ++H Sbjct: 198 FEEFNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVG--EGYENFESHS 255 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L +++GL V+ + + V+ + + R L F +DGVV+KV+S QQE+L Sbjct: 256 EALAALRRYGLRVNPHT-VHGDIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERL 314 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G V +APRWA+A+KF T +RD+ VGRTGA+TP A LEPV+V GV +S ATLHN Sbjct: 315 GAVQKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHN 374 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ G+ IGD V++ RAGDVIPQVV V ER D E P CPVCG V R EG Sbjct: 375 EDYIKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPEG 434 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EA+ RC C AQ E + H+ SR AMD++G+G+K+ +L + + ADL++L A Sbjct: 435 EAITRCANVR-CPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRAE 493 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L LE +G KSAQN++ A+E++KE F R L+ LGIR VG ATA +A F E L Sbjct: 494 QLAPLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGIRHVGSATAELIAERFSGEELLRG 553 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 +EEL ++ VG +VA V +F+ E NR ++ L+ G+++ E P +G Sbjct: 554 VGVEELTQIEGVGEIVARAVVEYFSLEENRKLVRRLMEHGLNFGPVRGKPEEG---PLSG 610 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 + +V+TG+LS+ R + + G V SVS+ TD ++AGE GSKL +A+ELG+ V+ Sbjct: 611 RRLVITGTLSR-PRSEISDLIEGAGGTVTSSVSRNTDYLVAGENPGSKLERARELGVPVL 669 Query: 661 DEAEMLRLL 669 DE + RLL Sbjct: 670 DEEGLRRLL 678 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 826 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 280/672 (41%), Positives = 406/672 (60%), Gaps = 13/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + +++ LR + +H Y Y+V++ P I D EYDRLMR L ELE +PEL+TPDSPTQR Sbjct: 13 KEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQR 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L F ++H VPMLSLDN ++EE + F+KRV+ L+ +E V + ELK+DG+++ Sbjct: 73 VGGKVLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESE-VEYVAELKIDGVSI 131 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YENG V ATRGDG GED++ NV+TIR++PL+L P +EVRGE+++P F Sbjct: 132 ALRYENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLRK---PLTIEVRGEIYMPVDEF 188 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +++NE+ G FANPRNAAAG+LRQL+ + A R L F Y V E L T Sbjct: 189 KRLNEEREEEGLPPFANPRNAAAGTLRQLNTALVASRRLDSFIYYVVHPENYGL-KTQWE 247 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K+ G V+ LC++ +EV+ ++ + +E + L + +DGVV+KVN Q+ LG Sbjct: 248 ALQFLKEIGFKVNPHSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQKVLG 307 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 ++APRWA+AFKFPA++ T + DV QVGRTG +TPVA LEPV +AG +V A+LHN Sbjct: 308 ETSKAPRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHNF 367 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER-VEG 420 + I +RIGD V + +AG +IPQ+V + R +E+ P CPVCG V + Sbjct: 368 EYIREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSPD 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C A+ K +L+ FVSR A+D++G+G+KIID+LV+ V AD+F LT Sbjct: 428 EVAIRCLNPH-CPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPF 486 Query: 481 KLTGL-ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L L +G ++ ++ +E+AK+ + + LGI VG+ TA LA +F +LEA+ Sbjct: 487 DLAQLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIA 546 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS E L+ +P +G +A + +F R +I +L GV V Sbjct: 547 EASYETLKDIPGIGPEIARSIVEYFRNPKTREIIEKLKKAGVKLEEKTVKYDV-----LK 601 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T +TG+L +R++ L LGA+V SVSK TD +I GE GSK KA+ L ++ Sbjct: 602 GLTFAVTGTLKNFTREEIIEFLERLGARVVNSVSKNTDYLIVGENPGSKYEKAKALKVKT 661 Query: 660 IDEAEMLRLLGS 671 + E E LR + + Sbjct: 662 MSEEEFLRFVEN 673 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 299/708 (42%), Positives = 418/708 (59%), Gaps = 52/708 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I Q++ ELR ++ Y Y+V+DAP + D YD+L REL++LET++PEL+TPDSPTQR Sbjct: 18 TEIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDSPTQR 77 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-------VTWCCEL 114 VG P F ++H +P+ SL+N F A+ R Q + + + + CEL Sbjct: 78 VGEQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQAIGEQSATLRSPEYVCEL 137 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG A+++ YENGVLV ATRGDG GEDIT+NVRTIR+IPL+L + P +EVRGE Sbjct: 138 KIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEVRGEA 197 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL---- 230 FLP F ++N++ + G +FANPRNAAAG+LRQLD RI AKR L FF Y + + Sbjct: 198 FLPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAKRRLDFFAYTLHLPLASA 257 Query: 231 ---------------------------------------EGGELPDTHLGRLLQFKKWGL 251 LP T L ++ G Sbjct: 258 RSATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTHLPQTQWQSLELLQQIGF 317 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 V+ LC + +V +Y R L + DGVV+K+NSL QE LGF + PRWA+ Sbjct: 318 RVNPHRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSLRLQEHLGFTQKFPRWAI 377 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A+K+ ++ +T V ++ VGRTGA+TPVA L PV +AG VS ATLHN D + L L I Sbjct: 378 AWKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVSRATLHNRDRLAELDLHI 437 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 GDKVVI +AG++IP+++ V RP D R PTHCP CG V + EAV RC + Sbjct: 438 GDKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQPVVQPVDEAVTRCLN-VS 496 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C A + ++ H+V R AMD+DG+G+K++ QLV++ V++ ADL++LT +L LERMG K Sbjct: 497 CPAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLERMGNK 556 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 A+ VV A+ K++ ++R LY LGIR VG A L F ++E L AAS E+++ V Sbjct: 557 LAEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIEAVHG 616 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHW-PAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G +A + +F +N ++I +L A GV + + ++ P AGKT VLTG+L Sbjct: 617 IGPEIAQSIVQWFQTPANHSLIEQLSAAGVQLAQDTVAVPPSQLPQPLAGKTFVLTGTLP 676 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +SRD+A++ + + G KV SVSKKTD ++ G AGSKL KA +LGI Sbjct: 677 TLSRDEARSMIGQAGGKVTDSVSKKTDFLVVGADAGSKLDKAGQLGIP 724 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 304/667 (45%), Positives = 393/667 (58%), Gaps = 12/667 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ EL +RHH+ LY+ ++PEI D EYD L REL +LE P+L PDSPT RV Sbjct: 5 AARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSPTLRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 +P AF ++ H PMLSLDN E F +R+ D L + V CE KLDGLAVS Sbjct: 65 SGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPV--VCEPKLDGLAVS 122 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +LY GVL+ TRGDG+ GED+TSNV TIR +P ++ + LEVRGEV++ + F Sbjct: 123 LLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRI---DYMGELEVRGEVYMSRRDFA 179 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N+ G FANPRNAAAGSLRQLDPR+TA+R L+ F Y V L T Sbjct: 180 ALNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGL-KTQEEL 238 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 LL K PV + LC EEVL + + R + D DGVVIK++SL +E LG Sbjct: 239 LLWLKGRSFPVQEDFRLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREVLGS 298 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 R+PRWAVAFKFP +E+ T V +E VGRTG +TP A LEPV ++G V A+LHN D Sbjct: 299 TNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFD 358 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ R +R+GD V +R+AG++IP+V+ V L RPE T V P CP CGS + R+ GE Sbjct: 359 ELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEV 418 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC C AQ KE + HF SR MDV G+G+K+ QLV++ V ADLF LT Sbjct: 419 AIRCINP-SCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDW 477 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 L+RMG +SA N+V AL+ A++ + +YALGI VGE TA LA FG LEAL AS Sbjct: 478 LSLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDAS 537 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EEL V VG VVA V +FF +S ++ L GV P G Sbjct: 538 EEELASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVRMEERPT-----AGGPLEGMR 592 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V TG L M R +A+ ++ LG KV+ SVSK ++AGE GSKL++A+ LG+ + E Sbjct: 593 FVFTGELGSMRRKEAQDLVIRLGGKVSDSVSKGVTALVAGEGGGSKLSRARALGVPIWSE 652 Query: 663 AEMLRLL 669 L L+ Sbjct: 653 DRFLELV 659 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 299/670 (44%), Positives = 417/670 (62%), Gaps = 6/670 (0%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I++++ +L L +H Y Y+V+D+P I D EYD ++R L+ELE K I PDSPTQR Sbjct: 6 EDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKW-GYILPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGAAP F + H PMLSLDN F E F+ RV+ L ++E+V + E K DGLAV Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEELRDFDARVKRLLGSSEEVEYTVEPKYDGLAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-ENIPARLEVRGEVFLPQAG 180 + Y++G+L A+TRGDG GEDIT N++TI+AIPL++ G + IP +++RGEV+L Sbjct: 125 ELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIPEEIDIRGEVYLNIDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE+IN++ G VFANPRNAA+GS+RQLDP ITA R L CYG+G ++G E + + Sbjct: 185 FERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIE-FKSQI 243 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + KK PV V L + EEV+ ++E+ R F+ DG V+KVNS Q +L Sbjct: 244 EFIEWLKKGRFPVPAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFELQRKL 303 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G R PRWA+A+K+PA + +T ++D+ VGRTG ITPVA LEPV + GV VS +TLHN Sbjct: 304 GTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSRSTLHN 363 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+ER +R+GD V++ RAG+VIP ++ VV R + +EV P HCPVCGS R G Sbjct: 364 WDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKTVREPG 423 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E +C C AQ +E +KHF SRRAM+++G+GDK ++ L K + DL+KL Sbjct: 424 EVAVKCIN-FNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYKLRQE 482 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + GL S++ ++ A+ K+K+TT +R LYALGI +VGE + LA +F LE L Sbjct: 483 DIKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLEDLYH 542 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 E+L ++P +G A + FF E N I EL G+ P E+ SP G Sbjct: 543 IKAEKLVQIPQIGEKTAKTIEQFFNNEENLKAIEELKRMGLKVENPEFE-EEKKPSPLKG 601 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 T V+TG+L + R++ K + + G KV+ SVSK TD ++ GE GSKLAKAQ L ++ + Sbjct: 602 LTFVITGTLPK-PREEVKEMIEKAGGKVSSSVSKNTDYLLVGEDPGSKLAKAQALRVKTL 660 Query: 661 DEAEMLRLLG 670 E L++L Sbjct: 661 SYEEFLKMLE 670 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 324/688 (47%), Positives = 424/688 (61%), Gaps = 25/688 (3%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ LR + HH YLY+ DAPEI DA +D LMRELRELE +P+ I P SPTQRV Sbjct: 18 DVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELANPQYIDPTSPTQRV 77 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G FS +RH V M SLDN + + R + + V +CCELK+DG +++ Sbjct: 78 GGYVGEQFSPVRHAVRMYSLDNAMGLDELDEWLARTLEAIG--HPVQFCCELKIDGSSIA 135 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR------LEVRGEVFL 176 + YE GVL AATRGDGTTGED+T N+RT+R IPL+L + + +EVRGEV++ Sbjct: 136 LTYEAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDSDASIEVRGEVYM 195 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 P++ FEK+N A TG + FANPRNAAAGSLRQ DP+IT R L F Y + + Sbjct: 196 PKSSFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFLYAI-ADDAPIRA 254 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 ++ L + G V+ V LC++ +EV F +V E R +L + IDGVV+KVN A Sbjct: 255 ESQNDLLEWLRDCGFHVNPDVKLCDTPQEVHDFCEQVAEKRDSLPYGIDGVVVKVNDFAT 314 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q +GF ARAPRWA+A+KFP +E+ T + D+ QVGRTGA TPVA L+PV V G V+ A Sbjct: 315 QRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELDPVLVDGSTVARA 374 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN DE+ R +RIGD V++R+AGDVIP+++ VLS RPE + P CP CGS + Sbjct: 375 TLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEMPATCPSCGSPLV 434 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R EGEA RC + C AQ E L H+ SR AMD+DGMGD+I+ +LVE V AD + Sbjct: 435 REEGEAAFRCV-SIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVESGRVLDVADYYN 493 Query: 477 LTAGKLTGLE-----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 LT L LE +G A ++ +LE +K TFAR L+ LGIR VG+ T Sbjct: 494 LTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFGLGIRHVGKTTG 553 Query: 526 AGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA 585 +AA + ++E L A+ E L +V +G V+A + F A E NR VI L GV Sbjct: 554 EAIAAAYPSMEKLMNATEEGLAQVDGIGAVIAKSIVTFLATEDNREVIHRLERAGVTMAD 613 Query: 586 PIVINAEEIDSPFAGKTVVLTGSL--SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + + I AG T VLTGSL S M+R +A RL +GAKV+GSVSKKT V+AGE Sbjct: 614 EVKESD--IPQTLAGITFVLTGSLTESGMTRTEAGDRLKAMGAKVSGSVSKKTGYVVAGE 671 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLGS 671 AAGSK KA +LG+ V+ EAE LRLL + Sbjct: 672 AAGSKYDKAVQLGVPVLTEAEFLRLLEA 699 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 298/669 (44%), Positives = 426/669 (63%), Gaps = 4/669 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++L LR +R H+YLY+V PEI D EYDRLM++L +E PEL+TPDSPTQRV Sbjct: 7 EILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P+ Q+ H PMLS++N + E F +R L E V W ELK+DG+A+S Sbjct: 67 GEEPMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSLDG-EAVEWVVELKVDGVAIS 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG+LV A TRG+G G+D+T NVRTI +PL+L+G+ IPA LEVRGEV++ + Sbjct: 126 VRYENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDLV 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N+ + G +++AN RN A+G++R LDP++ A+R L +GVGV EG + H+ Sbjct: 186 LLNKRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEGMT-AENHMQF 244 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L Q GLP + + E + + ++ E L F++DG+V+KVN Q+ +LG Sbjct: 245 LEQVSSLGLPPTPHCKCFATFSEAVKYCEEIPERLHELDFEVDGLVLKVNRFDQRAKLGQ 304 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +++PRW +A+KF E T + + QVG+TGAITPVA LEPV +AG VS A+LHNAD Sbjct: 305 RSKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLHNAD 364 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 EI R +RIGD VV+ +AG +IP +V V +ER D FPTHCPVCGSDV + EG Sbjct: 365 EIVRKDIRIGDIVVVEKAGKIIPHIVRVEAAERTTDLPVFQFPTHCPVCGSDVAKDEGGV 424 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RCT C AQ +E L+ F +R AMD++G+GDK++DQLV + V DL++LT KL Sbjct: 425 YIRCTNP-SCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRLTLDKL 483 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 T LERMG KSA ++ + +K +R L L IR +G + LA +FGTL+A+ A+ Sbjct: 484 TSLERMGEKSATKLLEGIVASKSRPLSRLLNGLSIRHIGSNGSQVLARHFGTLDAIRQAT 543 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E+L +V +VG + A+ V+ F + + I +L+A G++ P + FAGKT Sbjct: 544 LEDLSRVSEVGEITAASVYEFLHSDYGKTTIDDLVALGLNTQEPKSAIPTG-EGIFAGKT 602 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V+TG+LS+ SRD+ + + + G K + SVSKKTD ++AG AGSKLAKA+ LG++++ E Sbjct: 603 FVVTGTLSKFSRDEVEDLIEKHGGKASSSVSKKTDYLLAGAEAGSKLAKAESLGVKILSE 662 Query: 663 AEMLRLLGS 671 A+ + LL + Sbjct: 663 ADFIALLPT 671 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 281/668 (42%), Positives = 422/668 (63%), Gaps = 9/668 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+++ EL +R ++Y Y+V P + D EYD L EL LE HPELITPDSPTQR Sbjct: 28 EEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELITPDSPTQR 87 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G PL+ FSQ+ HE+PMLSL+N + +E AF +R++ L K+++ E K+DG+++ Sbjct: 88 IGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPGK-KISFTVEPKIDGVSI 146 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S +Y+NG+ ATRG+GT G+DIT N++TIR++PL+L + P LEVRGE ++ F Sbjct: 147 SAVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEAYMSPKDF 206 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N + G +FANPRNA AGSL+QLDPR+ A+RPL YG G L G + T Sbjct: 207 ERLNAQREKEGKVLFANPRNATAGSLKQLDPRVVAERPLAVVFYGAGKLVGMKC-KTQEE 265 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK GLP+ +C + EV K+ E R L + DG +KVN LG Sbjct: 266 WLNFLKKIGLPIPIVFWVCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEWEYYSLLG 325 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A+APRWA A+K+ A+ T + +V FQVGR+G ITPVA ++PV ++G VS ATLHN Sbjct: 326 YTAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVSRATLHNF 385 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+++RL ++IGD V + +AG+VIP+VV V L++R +E+V P CP CG + Sbjct: 386 DQVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEKEIVPPEFCPSCGEKLSWE--G 443 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C AQ KE + HF R AMD+ G+G+ ++DQLV+K V AD++ L Sbjct: 444 IFLRCEN-ENCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDLDEET 502 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+RMG KSAQN++ A+E++K+ +R ++ LGI +G+ + LA YFGT++ L A Sbjct: 503 LVNLDRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIPHIGQKASEDLARYFGTMDKLSHA 562 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + EEL +P +G ++A + N+F +E+NR + +L +G+++ + ++ +GK Sbjct: 563 TEEELLNLPFIGEIMARSIVNYFRKEANRRRLEKLRKKGLNFVST---LSQASSGTLSGK 619 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 T V+TG+LS+ R+ +++ G +V+ S+S+KT ++ G GSKL +A++LGI +I+ Sbjct: 620 TFVITGTLSE-PRESIAQKIISKGGRVSNSLSRKTSYLVVGSDPGSKLQEAKKLGIPLIN 678 Query: 662 EAEMLRLL 669 E E+L +L Sbjct: 679 EQELLEML 686 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 297/668 (44%), Positives = 419/668 (62%), Gaps = 9/668 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++ EL L + Y Y+V D P +PD+EYD+L+ EL ++E +HPE T DSPT Sbjct: 1 MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG A+F+++ H+ PMLSL N F+E+ F++R+++++ V + CELK+DGLA Sbjct: 61 RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIG---NVEYMCELKIDGLA 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ Y +G V TRGDGTTGEDIT N++TI AIPLK+ P +EVRGE ++P+ Sbjct: 118 VSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKE---PLNVEVRGEAYMPRRS 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++NE+ + ++FANPRNAAAGSLRQLD ++TAKR L+ F Y V + Sbjct: 175 FLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFN-ARSQS 233 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + K G + + + VL + K R +L +DIDG+VIKVN L QQ+++ Sbjct: 234 EALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEM 293 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF ++PRWA+A+KFPA+E +T + D+E +GRTG +TP A LEPV VAG VS A+LHN Sbjct: 294 GFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHN 353 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I +RIGD VV+++AGD+IP+VV + RPED PTHCP CG ++ R+EG Sbjct: 354 EDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEG 413 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ E L HFVSR+AM++DG+G KII QL + E + AD+F LT Sbjct: 414 EVALRCINP-KCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEE 472 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+RMG K N++ A+++AK+ + L+ LGIR +G + LA + T++ L Sbjct: 473 DLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLT 532 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP-FA 599 + EL ++ D+G VA V + E R +I +L + V+ + ++ P F+ Sbjct: 533 VTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFS 592 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT+VLTG L QM+R++A L GAKV SV+K TD+VIAGE AGSKL KAQ LGIE+ Sbjct: 593 GKTIVLTGKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEI 652 Query: 660 IDEAEMLR 667 E + + Sbjct: 653 WTEQQFVD 660 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 321/667 (48%), Positives = 437/667 (65%), Gaps = 6/667 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 Q++ ELR +R H+Y Y+V+DAPEI DAEYDRLMREL +LE HPEL+T DSP+QRV Sbjct: 12 DAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQRV 71 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G PLAAF + H VP+LSL N D++ F++ + R + + +T+ E K+DGL V Sbjct: 72 GGQPLAAFRAVSHRVPLLSLANAVDDQDLREFDR--RARERADRPLTYVVEPKIDGLTVV 129 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YE G + AATRGDG GEDIT N++T+RA+PL+L + LEVRGE +LP+A F Sbjct: 130 LSYEEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLKRD--IKSLEVRGEAYLPKAAFA 187 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+ G FANPRNAAAGSLRQLDP++TA RPL + Y + LEG + + Sbjct: 188 RLNEEREEAGEAAFANPRNAAAGSLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEA 247 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + GLPV+ C + ++V+ + E R L ++IDG+V+KVN L Q LG Sbjct: 248 LQMLEDLGLPVNPERRYCRTIDDVIDYCRYWTEHRHDLPYEIDGMVVKVNELDQYPLLGE 307 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A++PR+A+AFKFP ++ +T VRD+ +VGRTG ITP A LEPV +AG VS ATLHN D Sbjct: 308 TAKSPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRATLHNED 367 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I + IGD VVI++AGD+IP+V++V+ +R + R P CP C S V R++GEA Sbjct: 368 IIRERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVSRLKGEA 427 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RCT L C AQ KE L HF SR AM+++G+G +++ L E V PADL+ LTA ++ Sbjct: 428 AIRCT-SLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLYDLTAEQV 486 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LERMG KSA N++ A+E +K A ++ALGIR VG+ A LA +FG+++ L A+ Sbjct: 487 APLERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSMDQLMKAT 546 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EELQ V ++G +A + +FA +NR +I L +G+ + FAGKT Sbjct: 547 TEELQAVSEIGPKMAESLQRWFAVPANRQMIDRLAEKGLQM-ETEKAGDAGVPQTFAGKT 605 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG+L+ + R +A+ L E GAKVA SVSKKT LVIAGEAAGSKL KA+EL I ++ E Sbjct: 606 VVLTGTLTTLDRREAQRLLEERGAKVASSVSKKTSLVIAGEAAGSKLEKAKELNIPILSE 665 Query: 663 AEMLRLL 669 A+ L+L+ Sbjct: 666 ADFLQLI 672 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 288/667 (43%), Positives = 410/667 (61%), Gaps = 7/667 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I+ Q+ L + +H Y+ D PEI D EYD LM+EL +LE ++PE DSP+ R Sbjct: 4 EDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSPSNR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L F Q+ H+ PMLSL N + E F++RV++ + V + E K+DGL+V Sbjct: 64 VGGMALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVRE--MTDGDVEYVVEFKIDGLSV 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 I YENG SAATRG+G GEDI+ NV TI++IPLK+ + VRGEV++ + F Sbjct: 122 GITYENGEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDD---KREIIVRGEVYISKENF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+NE ++FANPRN AAGSLRQLD ++TAKRPL F + + + + DTH Sbjct: 179 EKVNEYQEEHDLQIFANPRNLAAGSLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSD 238 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L KK G VS+ +C+S +EV+ F E+R +L FDIDG+V+KVN++ Q+ ++G Sbjct: 239 SLEYLKKLGFSVSENYKICKSIDEVIEFIEYWTENRGSLKFDIDGMVVKVNNIEQRNEMG 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F A++PRWA+A+KFPA+ + + + D+E +VGRTG ITP A LEPV +AG VS ATLHN Sbjct: 299 FTAKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHNE 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +++ D V++++AGD+IPQ+V VV +R D ++ V P+ CP CG R+EGE Sbjct: 359 DFIREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEGE 418 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A +C + C AQ + + HFVSR AMD+DGMG+ II +++ + +D++ L + Sbjct: 419 AAVKCIN-ISCPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LERMG KSA N++ A+EK+K R + LGIR VG A LA+ F +L+ + A Sbjct: 478 IVPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 +E LQ++ + G +++ V FF E + + L + +E I F G Sbjct: 538 DVERLQQLEEFGSIMSESVVKFFR-EEQNLAVIQKLKDAGVNTEAGEDKSEGIPQLFEGM 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 +VLTG+L + R+ AK + G K SVSK T V+AGE AGSKL KA +LGI+VID Sbjct: 597 KIVLTGTLPTLKRNQAKEIIELRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIKVID 656 Query: 662 EAEMLRL 668 E L+L Sbjct: 657 EDMFLKL 663 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 293/672 (43%), Positives = 427/672 (63%), Gaps = 10/672 (1%) Query: 1 MESI--EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M+ + + ++ +L T+ +H Y+ D+PEI D EYD+LM+EL LE +HPEL DSP Sbjct: 1 MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 T RVG PL F+QI H+ PMLSL N F E+ F+KRVQ+ + E V + E K+DG Sbjct: 61 TNRVGGKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVG--ENVEYVVEFKIDG 118 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+V + Y NG ATRGDG GEDI+ N+ T+++IPLK+ N L VRGEV++ + Sbjct: 119 LSVGLTYNNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKI---NDKKELIVRGEVYISK 175 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F K+NE +FANPRN AAGSLRQLDP++TAKRPL F + + +E +L ++ Sbjct: 176 DNFRKVNEQQEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDL-ES 234 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H L +K G VS +C+S +EV+ ++R L ++IDG+VIKVN++ Q++ Sbjct: 235 HSESLEYLEKLGFSVSQSYKVCKSIDEVIEHIEYWTDNRGNLDYEIDGMVIKVNNIKQRD 294 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 ++G+ A++PRWA+A+KFPA+++ T + D+ +VGRTG ITP A LEPV +AG VS ATL Sbjct: 295 EMGYTAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATL 354 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I ++I D V++++AGD+IPQV+ V+ ER D + P CPVC R+ Sbjct: 355 HNEDYIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRL 414 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGEA +C + C AQ + + HFVSR AM++DG+G+ II L+ ++ + +DL+ + Sbjct: 415 EGEAAVKCIN-MSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIK 473 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 + LERMG KSA N++N++EK+KE R + LGI+ +G A LA F L+ + Sbjct: 474 KEDVVDLERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEV 533 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +A+ E+L+++ + G ++A+ V FF E+ N NVI++L GV+ + E+++ F Sbjct: 534 ISATSEQLEELEEFGSIMANSVVEFFKEDKNMNVINKLKNVGVNTKSLDNTG-EKVEKIF 592 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 G +VLTG+L + R+DAK + + G K SVSK T V+AGE AGSKL KA +LGI+ Sbjct: 593 EGMKIVLTGTLPTLKRNDAKEMIEKRGGKATSSVSKSTTFVLAGEEAGSKLTKANDLGIK 652 Query: 659 VIDEAEMLRLLG 670 VIDE L LL Sbjct: 653 VIDEERFLELLK 664 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 293/673 (43%), Positives = 423/673 (62%), Gaps = 12/673 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++++ +L E++ L + Y Y+V+D + DA YD L REL E+E HPE ITPDSPTQR Sbjct: 6 QNLQARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSPTQR 65 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L FS++ H M SL N F E F +RV +++ V++ CE K+DGLA+ Sbjct: 66 VGDQLLEGFSKVAHAESMYSLGNAFSPEEVTQFIERVTQQVEG--PVSFMCECKIDGLAI 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y++GV V ATRGDGT GEDIT N+RTIR++PL+L +EVRGE ++P+A F Sbjct: 124 ALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLRQNL---SVEVRGECYMPKAVF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE+ G ++F NPRNAAAG LRQLDPR A R L F Y + P++ G Sbjct: 181 LALNEEREAQGQEIFKNPRNAAAGGLRQLDPRAVADRQLNIFLYSAVYTDEFH-PESQAG 239 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 F++ GL + C++AEEV+ + + + R L ++IDGVVIKVN + QQ+ LG Sbjct: 240 LFAAFEQLGLRTNPLRRECQTAEEVIDYIQMIGQQRHDLPYEIDGVVIKVNHIDQQQALG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F +APRWA+A+KFPA+E +T +R+VE+ VGRTG +TP A ++PV +AG V A+LHN Sbjct: 300 FTVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPVPLAGTTVQRASLHNV 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D IE L +RIGD+V I +AGD+IP++ +V+L++RP+D++ + PTHCP C + + R E Sbjct: 360 DLIESLDVRIGDQVTIHKAGDIIPEITSVLLAKRPQDSQPLAIPTHCPECQTALVRQGEE 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC L+C AQR L HFVSR AM++ G+G +I++QLV + V DL++L+ Sbjct: 420 VALRCPN-LVCPAQRLALLSHFVSRGAMNIQGLGPRILNQLVASQAVTELDDLYRLSLED 478 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L+++ KSAQ ++ A+E +K + R L+ LGIR VG A + FG L L A Sbjct: 479 LLSLDKIQEKSAQKLLAAIEASKSNSAERLLFGLGIRHVGAKAARLVLQVFGDLNRLSQA 538 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN-----AEEIDS 596 + EE+ + VG +++ + + ES++ ++ L GV+ E + Sbjct: 539 TAEEIGAIEGVGPIISQSLVQYLTLESSQAMLKRLAEAGVNLTYQGPQPLEVAQGETAND 598 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 + GKTVVLTG++ SR +AK L GAKV GSVSKKTD ++AG+ AGSKL+KA+ LG Sbjct: 599 FWLGKTVVLTGTMESYSRSEAKELLEARGAKVTGSVSKKTDYLVAGQEAGSKLSKAESLG 658 Query: 657 IEVIDEAEMLRLL 669 + ++DEA L L Sbjct: 659 VTILDEASFLANL 671 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 325/675 (48%), Positives = 432/675 (64%), Gaps = 11/675 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S QQ+ LR ++RHHEYLY+V D PEI D +D LMR+L+ LE +HPELITPDSPTQRV Sbjct: 5 SAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P F+++ H PMLSLDNV EE + +RV+++ N ++ + CE KLDGL+++ Sbjct: 65 GGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEYKLDGLSMA 124 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPL-----KLHGENIPARLEVRGEVFLP 177 + Y +G L TRGDG GED+T+NVRTIR++PL KL +PA EVRGEV +P Sbjct: 125 LHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFEVRGEVVMP 184 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 FEK+NE+ G ANPRNAAAG++R L+P I A+R L F+ Y +G + Sbjct: 185 FTAFEKLNEEREAQGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYFALTEKGEDAFG 244 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L G V+ +S E V+ F ++ EE R LG++IDGVV+KVNS Q Sbjct: 245 EQEEALDALATLGFRVNQHRHAAKSIETVVEFVNRAEEHRSRLGYEIDGVVVKVNSAVLQ 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG+ RAPRWAVA+KF A+ +T V D++ QVGRTG +TPVA L PV V G V+ AT Sbjct: 305 RRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAPVQVGGTTVTRAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS-ERPEDTREVVFPTHCPVCGSDVE 416 LHNADEIERLGLRIGD V I R GDVIP+VV VV E P T+ FP CP CGS+V Sbjct: 365 LHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHFPHACPACGSEVV 424 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GEA RC C A+ +ESL HF SR M+++GMG+ I+ QL+ + V T +D++ Sbjct: 425 RTPGEADYRCVNT-DCPARLRESLLHFASRGVMNIEGMGEAIVMQLLGRGLVKTVSDIYS 483 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 LT +L LERMG KSA ++ ++K+++ R L+ LGIR VGE TA LA +G+++ Sbjct: 484 LTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGIRFVGERTAQALAEEYGSMD 543 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL AS EEL++V DVG V+ + FF E NR+++ L G+ + S Sbjct: 544 ALMQASREELERVNDVGPRVSEAIREFFDEPRNRDLVERLREAGLRFTGEKRKKT----S 599 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AG T VLTG+L +SRD+AK ++ G V+GSVSKKT+ V+AG AGSKL KA LG Sbjct: 600 QLAGLTFVLTGTLPGLSRDEAKGKIENAGGHVSGSVSKKTNYVVAGADAGSKLEKANSLG 659 Query: 657 IEVIDEAEMLRLLGS 671 + VIDEA ++++L + Sbjct: 660 VPVIDEAALIKMLET 674 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 343/662 (51%), Positives = 455/662 (68%), Gaps = 2/662 (0%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 I +L LR T+R HEY Y+V++AP I D+E+D LM++LR LE I DSPTQRVG Sbjct: 8 IAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADSPTQRVG 67 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F + H + MLSLDNVF+ + F F +R+Q++L ++ E K DGLA+++ Sbjct: 68 GKADNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFDGLAINL 127 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 YENG+L A+TRGDG TGED+T NVRTI IPL+L+ P +E+RGE+++P+ F Sbjct: 128 RYENGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMPKKAFYA 187 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +NE A G K+FANPRNAA+GSLRQLDPRITA+R L FF YG G + +LP+T+ L Sbjct: 188 LNEQAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPETYEALL 247 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 Q++ W +PV + E LA Y + + R L FDIDGVV KVN A Q++ GF+ Sbjct: 248 EQYRAWHIPVCSLHQKAATLPEALAAYQQFAKQREQLPFDIDGVVFKVNRFADQQRAGFL 307 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 ARAPRWA+A+KFPA E+ T + +E QVGRTGA+TPVARL+PV +AGV+V +A+LHNA E Sbjct: 308 ARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSASLHNARE 367 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 I R +R+GD + IRRAGDVIP+VV+VVL +R D P HCPVC + + + E EAV Sbjct: 368 IARKDIRVGDTIFIRRAGDVIPEVVSVVLEKRLPDAPVFAMPEHCPVCAAAIVQNEDEAV 427 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 ARC+GGL C AQR +L HF SR A+D+ G+G+K+I QLV +E+V TPADLF LTA Sbjct: 428 ARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCLTADDWA 487 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 L RMG KSA NV+ A++ AK+TT ARF+YALGIR VG A LAA+FG L A AA Sbjct: 488 SLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGIRGVGSVNAQALAAHFGDLAAFMAADR 547 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 LQ++ +G VVA+ + +FFA+E NR VI+ ++A GVHW + + ID+P GKTV Sbjct: 548 AALQEIEGIGDVVAADIEHFFADEDNRAVIAAIVAAGVHWSTE--LTKKIIDAPLLGKTV 605 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 V+TG+L +SR +A+ RL LGAKV VS++TD ++ G AGSKLA+AQ + +IDEA Sbjct: 606 VITGTLPSLSRAEAQKRLETLGAKVTSQVSRQTDFLLLGADAGSKLARAQAFSVPIIDEA 665 Query: 664 EM 665 ++ Sbjct: 666 QL 667 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 305/671 (45%), Positives = 426/671 (63%), Gaps = 13/671 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +++ EL+ + H++ YHV+D P I D EYD+L EL ++E L DSP+QRVG Sbjct: 21 KKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNPKGLDLSDSPSQRVGG 80 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L F++ +H +PMLSL N + E F++RV+ L + V + CELK DGL++ ++ Sbjct: 81 TVLEGFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDPVEYLCELKFDGLSMELI 140 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG LV A TRGDGT GED+T N++TI++IPLKL +N P LEVRGEV + + F ++ Sbjct: 141 YENGQLVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPLLEVRGEVLMFKEDFARL 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE + G + FANPRNAAAG++RQLD RI A RPL FF Y +G +EG E +T Sbjct: 201 NETQQENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYALGAVEG-ETFNTQKNIQE 259 Query: 245 QFKKWGLPVS-----DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 F G+P D + + + EEV+ +YH +E+ RP L FDIDGVVIKVNSL QE Sbjct: 260 YFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPFDIDGVVIKVNSLRLQED 319 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG VAR+PRWA A KF ++ T V D+ QVGRTGA+TPVA ++PV V GV V+NATLH Sbjct: 320 LGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAIMKPVKVGGVTVTNATLH 379 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERV 418 N DEI R +RIGD V+I+RAGDVIP+VV VV +RP D P CP C S + Sbjct: 380 NQDEITRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLPYSIPERCPACDSVAVKA 439 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGE V RC L C A KESLKHFV+RRAM++D +GD++I+ LV+ + + +D ++LT Sbjct: 440 EGEVVTRCVNPL-CIAVVKESLKHFVARRAMNIDKVGDRLIETLVDNKLLTRFSDFYRLT 498 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 ++ LER G KSA N++ ++E +K T ARF++ALGIR VGE T LA +F T++ Sbjct: 499 KEQILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQTGKHLADHFLTIDKF 558 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 AS EEL +VP++G VA + ++ + + ++ GV P+ + Sbjct: 559 LEASEEELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELGVKIAGPVR----AQEGSL 614 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +G + ++TG+L + RDDAK + G K+ GSVS K + ++ G+ GSK+ KAQ LG++ Sbjct: 615 SGMSFLITGTLP-VKRDDAKDLIERNGGKILGSVSSKLNYLVVGDDPGSKVEKAQGLGVK 673 Query: 659 VIDEAEMLRLL 669 +I E+ ++ Sbjct: 674 IISWEELQAMI 684 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 292/685 (42%), Positives = 410/685 (59%), Gaps = 18/685 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 ++++ ELR L + Y+V+DAP++ D+ YDRL REL +LE HPEL+ DSPTQRVG Sbjct: 7 LQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQRVG 66 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-------VTWCCELKL 116 +P F + H +P+ SLDN F E + R+ L + ELK+ Sbjct: 67 GSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGELKI 126 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DG A+++ Y+NGVLV AATRGDG GEDIT+NVRTI +IPL+LH + PA +EVRGE + Sbjct: 127 DGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGEALI 186 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG--GE 234 P F IN + +FANPRNA AG+LRQLDP++ A R L FF Y + + E GE Sbjct: 187 PDNTFAAINSERAARDEPLFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPEDWSGE 246 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 P + L + G V+ L + V F+ + R L + DGVV+K+N L Sbjct: 247 RPTSQWESLRWLEDAGFRVNPNAALLPDVDSVEQFFGDWDSRRHDLNYATDGVVVKLNDL 306 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 Q+ GF +APRWA+A K+PA+E + + + QVGRTG +TPVA EPV +AG VS Sbjct: 307 RLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLAGTSVS 366 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHNAD ++ L L GD +++R+AG++IP+V+ V+ RPE + P CP CGSD Sbjct: 367 RATLHNADRLQELDLHSGDTIIVRKAGEIIPEVLRVLPELRPEGALPLELPQQCPSCGSD 426 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + R GEA RC C A +L+H+VS+ A+DVDG+G K+I+QLVE+ V + ADL Sbjct: 427 LVRESGEAATRCVNS-SCPAILSGALRHWVSKGALDVDGLGSKLIEQLVERGLVRSIADL 485 Query: 475 FKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 ++L LT LERMG KSA N+V AL +++ ++R LY LGI VGE A LA+ F Sbjct: 486 YRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGIHHVGEVNAKALASAFAD 545 Query: 535 LEALEAASI---EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 +L A++ E + + +G +A + +F +N++++ +L A G+ A Sbjct: 546 AHSLADAAVQRPEAITDLHGIGPEIAQSLQQWFNTSANQDLLQQLRAVGLTLAASDQERQ 605 Query: 592 EEIDS-----PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 D G+T VLTG+L +SR A+A + G KV+GSVSKKT V+AG+ AG Sbjct: 606 ALADRNNGKGHLNGQTFVLTGTLPSLSRSQAQALIEGAGGKVSGSVSKKTSFVVAGDEAG 665 Query: 647 SKLAKAQELGIEVIDEAEMLRLLGS 671 SKL KA LG+ V+DEA ++ L+ + Sbjct: 666 SKLDKANTLGVSVLDEAALMLLIQN 690 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 322/675 (47%), Positives = 445/675 (65%), Gaps = 13/675 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +Q +LR LR+HE+ Y+V+D PEI DA+YD +M EL+ LE KHPEL+TPDSPTQR Sbjct: 5 KDPAKQAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P F ++ H PMLSLDN ++EE + +RV++ L ++ + CELKLDGL++ Sbjct: 65 VGGKPREGFVKVAHSAPMLSLDNAYNEEELRDWARRVEE-LSGKAEIEYECELKLDGLSM 123 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPL-----KLHGENIPARLEVRGEVFL 176 ++ Y++ V A TRGDG+ GED+T N+RT++++PL L ++ EVRGEV Sbjct: 124 ALRYQDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEVRGEVIF 183 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 P FEK+NED + G FANPRNAAAG++R L+P ITA+R L F+ Y + +++G Sbjct: 184 PTKSFEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFL-LVDGRVHI 242 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 D L +K G V+ + +S ++VL F HK EEDR L ++IDGVVIKVNS A Sbjct: 243 DRQSEALDTLEKLGFKVNSNRAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVIKVNSTAL 302 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++LGF +APRWA+A+K+ A+ +T V D+ QVGRTG +TPVA L+PV + G VS A Sbjct: 303 WQRLGFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIGGTTVSRA 362 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE-RPEDTREVVFPTHCPVCGSDV 415 TLHN DEI+RLGL IGD V + R GDVIP+VV V+ + P ++ P CP CG V Sbjct: 363 TLHNMDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERCPECGGHV 422 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 R EGEA RC C A+ +ES+ HF SR M+++GMGD +++QLV++ V AD++ Sbjct: 423 VRTEGEADHRCVNA-NCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVKNVADIY 481 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L KL LERMG KSAQN+++ ++ K+ R +Y LGIR VGE TA LA +FG+L Sbjct: 482 ELDEEKLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGIRMVGERTAQFLAEHFGSL 541 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 + + A+ EEL +V +VG +A +H FFAE SNR ++ L A G+ + +E Sbjct: 542 DGVMKATEEELLEVEEVGPRIAQSIHEFFAEPSNRELVKRLEAAGLQF----KGVKKERG 597 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 + AG+T VLTGSL SRD+AK + + G KV+GSVSKKT+ V+AGE AGSKL KA++L Sbjct: 598 TALAGQTFVLTGSLPTYSRDEAKKLIEDAGGKVSGSVSKKTNYVVAGEEAGSKLDKARDL 657 Query: 656 GIEVIDEAEMLRLLG 670 G+ VIDE + +LLG Sbjct: 658 GVAVIDEDALKKLLG 672 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 338/672 (50%), Positives = 443/672 (65%), Gaps = 7/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++I Q+ TL+ H Y Y+V+D P + D+EYD+L R L ELE ++P+L+ PDSP + Sbjct: 23 DAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLVQPDSPINQ 82 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLA 120 VG PL AF+Q+ H++PMLSL NVF+ F +RV DRL + + ELKLDGLA Sbjct: 83 VGDMPLPAFTQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELKLDGLA 142 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 VS+ Y +G A TRGDG TGEDIT N +TIR +PL L LEVRGEV +P+AG Sbjct: 143 VSLKYVHGKFTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVLMPKAG 202 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N A K FANPRNAAAGSLRQLDP + A RPL F+ Y V + DT Sbjct: 203 FERLNRLAAEKEEKTFANPRNAAAGSLRQLDPSVAASRPLAFYAYSV-NQGLLDTIDTQS 261 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L K G VS V + + E +Y + R L F+IDG+VIKVNSLA Q+QL Sbjct: 262 AALAWIKDIGFSVSA-VEVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSLALQQQL 320 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF++R PRWA A+KFPA+ MT + +++QVGRTG ITPV +LEPV V GV VSN TLHN Sbjct: 321 GFLSREPRWATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVSNVTLHN 380 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EI+RL +R GD V + RAGDVIP+V V +RPE++ V P+ CPVC S V + Sbjct: 381 FGEIQRLDVRAGDMVSVHRAGDVIPKVTRVWHEQRPENSEPVQLPSTCPVCDSPVVLPKD 440 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--T 478 EA+ARCTGGL C AQ++E+L HFVSRRAMD+DG+G + E V T AD+++L Sbjct: 441 EALARCTGGLFCPAQQQEALIHFVSRRAMDIDGLGASWLISFFEHGLVKTVADIYQLHNH 500 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L LE++G KS QN+++A+E +K TT +RF+YALGIR VGE TA LA FG L+AL Sbjct: 501 QEELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGIRGVGETTAQNLAQQFGDLDAL 560 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +ASIE+L PDVG + A + FF N VI+ L GVHW + +E + P Sbjct: 561 MSASIEKLLLTPDVGAITAELAYKFFRAPHNIEVITALREAGVHWDKVEQVVSEGL--PL 618 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 G+T V+TG+L M+RD+AKA+L LGAKV+GS+S KT ++AG+ AGSK+AKA++LG++ Sbjct: 619 DGQTWVITGALDSMARDEAKAKLQALGAKVSGSISAKTTALLAGDKAGSKMAKAEKLGVK 678 Query: 659 VIDEAEMLRLLG 670 V+ E E L L+G Sbjct: 679 VVGEEEFLALVG 690 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 295/671 (43%), Positives = 404/671 (60%), Gaps = 14/671 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +Q++ ELR +R+H Y Y+V+D PEI DAEYDRL++ELR LE HPELI PDSPTQ Sbjct: 1 MQTPKQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQ 60 Query: 61 RVGAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG+A L F+ + H M SL N F ++ F + L E + E K+DGL Sbjct: 61 TVGSAILETPFTPVPHPTRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDGL 120 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +V+++YE GV TRGDG TGED+T N+ I IP +L P LEVRGE++LP Sbjct: 121 SVNLIYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQ---PLDLEVRGEIYLPIQ 177 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G F NPRNAAAGSLRQ DPRI+A R L YGVG E T Sbjct: 178 TFLELNTQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPESL-GVGTQ 236 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + + G V + E + Y + R +L F+ DGV +K+N+L+ + Sbjct: 237 QELLEKLGQLGFSVDPHYQVVRGVEGIEQGYQAMLAARKSLPFEADGVTVKLNNLSLWSE 296 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG+ A+ PR+A+A+KFPA+E+ T V V FQVGRTG +TPVA LEPV + G VS TLH Sbjct: 297 LGYTAKTPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLH 356 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N ++ LGLRIGD V++ ++G VIP+V+ VV P V +PTHCP CG+ +E Sbjct: 357 NESYVQELGLRIGDTVLVHKSGGVIPEVLRVVTEA-PRGHAPVEWPTHCPECGTALELS- 414 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 + C L C A+ E+++HF SRRAMD+ G+G+K+I+QL+E V ADL+ L Sbjct: 415 -GKIHLCPNPL-CPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAADLYNLKK 472 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LER KSAQN++ +E +K R L+ALGI +VGE+TA LA FG L+++ Sbjct: 473 EDIAALERKAEKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDSIL 532 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A++EEL VPD+ A +H A ++ I L A G+ + A ++ + Sbjct: 533 KATVEELDAVPDIAETTAQAIHQALARPEMQSFIERLRAAGLVFEAREKQQSQAL----E 588 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T VLTG LS+ R++ +L GAK++GSVS+KT VIAG AGSKL+KA+ELGI + Sbjct: 589 GLTFVLTGELSR-PREEVARQLEAHGAKISGSVSRKTSYVIAGPGAGSKLSKAKELGIPI 647 Query: 660 IDEAEMLRLLG 670 +DEA + LL Sbjct: 648 LDEAGLRALLE 658 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 307/670 (45%), Positives = 414/670 (61%), Gaps = 7/670 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ELR L ++ Y+V+D P + D EYDRL REL+ +E ++P L T DSPT+RV Sbjct: 11 QTVERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTRRV 70 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN-EKVTWCCELKLDGLAV 121 GA +AFS RH V MLSLDN FD F + ++ + + + ELK+DG AV Sbjct: 71 GAPVQSAFSPHRHLVRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKIDGAAV 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y GVLV+AATRGDGT GED+T+NVRTIR +PL+LHG+N P +EVRGEV+LP AGF Sbjct: 131 ALTYREGVLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLMEVRGEVYLPFAGF 190 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++NE G V+ NPRNAAAGS+RQLD TA RPL FF Y + +G + Sbjct: 191 ERMNEARVAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYAAVLPDGSAPARSQWE 250 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q WG+PV+ C + +E A+ VE E R TLGF IDG V+KVN +A Q++L Sbjct: 251 LLEQLSAWGVPVAPHRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDMALQDEL 310 Query: 301 GFVA-RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 G A R PRW VA KF +T +R ++ VGRTG +TP A LEPV V G V+ A+LH Sbjct: 311 GIRADRTPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATVTFASLH 370 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 NAD+I LR GD V + RAGDVIP V+ V +R + PT CP C + VER Sbjct: 371 NADQIAAKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNTPVERYG 430 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 + C + C ++ E L HF S+ A+D+DG+ I QL++ VH ADLF +T Sbjct: 431 DDVAVYCPN-VACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADLFDITV 489 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +LT LER KSA+N+V A+ AK+ +R ++ LGIR VG A L+ +G+L+AL Sbjct: 490 DQLTSLERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGSLDALM 549 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A+ E+L V +G ++A V ++FA+ + R ++ L A G+ + P NA + D Sbjct: 550 NATAEQLGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP---NAVQADGVLT 606 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G TVVLTG+L +SR +A A + + G +V SVSKKT V+AGE AGSKL KA+ELG+ V Sbjct: 607 GATVVLTGTLPSLSRGEATALVEQAGGRVTSSVSKKTTFVVAGEEAGSKLDKAKELGVTV 666 Query: 660 IDEAEMLRLL 669 + EAE+L L Sbjct: 667 LTEAELLEKL 676 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 295/683 (43%), Positives = 414/683 (60%), Gaps = 18/683 (2%) Query: 1 MESIEQ---QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ME + ++ LR + H LY+V D PEI DA+YD L+R L+ELE HPEL+TPDS Sbjct: 1 MEDMFSPLIEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDS 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PTQRVGA PL AF + H P+LSL N F + A+ +RV+ L N CE K+D Sbjct: 61 PTQRVGAEPLKAFGIVNHPYPLLSLANAFSDTELEAWYQRVKKLLGNIP-FQIDCEPKMD 119 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLAV++ Y NG + ATRGDG GE+IT N+RTI +IPL N P EVRGEV+L Sbjct: 120 GLAVALTYRNGKFATGATRGDGFQGENITRNLRTIHSIPLN-AEPNAPPVFEVRGEVYLS 178 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + GF K+N + G +FANPRNAAAGSLRQLDP +TA+RPL F Y +G E LPD Sbjct: 179 KNGFAKLNRERADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPD 238 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +H L F K G ++ L + EE +Y ++ +R +L ++ DGVV KV+S++ Q Sbjct: 239 SHWQILDYFSKIGFRINPLNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFKVDSVSLQ 298 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG V R PRWA+A+KFPA++ MT ++ + VGRTG + P A LEPV+V GV+V A Sbjct: 299 HRLGDVGREPRWAIAYKFPAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAA 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF----------PTH 407 LHN D+I R +R GD V+I+RAG+VIP+VV VLS+R +++ T Sbjct: 359 LHNEDDILRKDIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTA 418 Query: 408 CPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 CPVCG ++ R GEA+ C + C AQ + L+HFVSR AMD+ G+G+ + L ++ Sbjct: 419 CPVCGGEIYRPAGEAMHYCAN-VSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGL 477 Query: 468 VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAG 527 V +DL+ LT L L RMG KSA N+++A+ +K R ++ LG+R VG TA Sbjct: 478 VKNVSDLYYLTTADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGVRHVGNETATL 537 Query: 528 LAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 L+ ++G + AL + ELQ +PD+G +AS + +F+EE N VI L GV + Sbjct: 538 LSRHYGNIWALAKTGLGELQTIPDIGDKIASSIVAYFSEEKNVAVIRRLEEAGVRLTSDQ 597 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 + PF+G V+TG L SR++A+ ++ LG +V+K T+ ++ G AGS Sbjct: 598 K--PVNKNMPFSGMEFVVTGKLESFSREEAQEKIRSLGGTAKDNVTKATNYLVVGADAGS 655 Query: 648 KLAKAQELGIEVIDEAEMLRLLG 670 KL KA+ +G++ + E E + +L Sbjct: 656 KLTKARSMGVKELSEREFINMLE 678 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 336/721 (46%), Positives = 437/721 (60%), Gaps = 57/721 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L + H+ LY APEI DAEYDRL L LE P LITP+SP+Q Sbjct: 62 EDAKDEHDALAAEIARHDLLY-QDAAPEISDAEYDRLRLRLNALEAAFPSLITPESPSQT 120 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 VGA P F+++RH V MLSL NVF +E F RV+ LK +E + E+K+DGL Sbjct: 121 VGATPSEKFAKVRHTVRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKIDGL 180 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 +VS+ YENG L AATRGDG+ GED+T+NVRTI IP + ++PA EVRGEV++ A Sbjct: 181 SVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYMSHA 240 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE----- 234 F+ +NE GG++FANPRNAAAGSLRQLDP ITA RPL FF +G G + G Sbjct: 241 DFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEASAL 300 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 DT+ G L WG P+ V +C S EE+LA Y +E R +LG+DIDGVV KVN L Sbjct: 301 PADTNFGVLQAIHGWGFPLPP-VEICRSVEEMLAVYRAIEMKRASLGYDIDGVVYKVNRL 359 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 QE+LGF++R PRWA A KF A++ T + ++ QVGRTGA+TPVA+L PV V GV+V Sbjct: 360 DLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGGVVVQ 419 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 NATLHN DEI R +RIGD V+++RAGDVIPQ++ VL +RP D E VFPT CPVCGS Sbjct: 420 NATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPVCGSH 479 Query: 415 VERV------EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 R + +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K I ++ + Sbjct: 480 AVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFDEGRI 539 Query: 469 HTPADLFKL------TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 PAD+F + KL+ E G +SA N+ A+E + + RF++ALGIR VGE Sbjct: 540 KAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGIRHVGE 599 Query: 523 ATAAGLAAYFGTLEALEAASIE--------------------------------ELQKVP 550 TA LA FG+L+AL AA E +L ++ Sbjct: 600 TTAKLLAKTFGSLDALRAAMAEPDAAELRPGDELLLESASGEDKRSLHRAIILAKLNEID 659 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 +G VVA + +FF E NR + L E +++ S AG TVV TG L Sbjct: 660 GIGDVVAQSIVDFFDEPHNREAVDALRRE----LTIEAYKPDQVSSLLAGATVVFTGKLE 715 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + +RD+AKA+ GAKVAGSVSK T ++AG AGSKL KA++LG++V+ E E L ++ Sbjct: 716 RFTRDEAKAQAERFGAKVAGSVSKATTYLVAGPGAGSKLKKAEDLGVKVMTEDEWLEMIS 775 Query: 671 S 671 S Sbjct: 776 S 776 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 313/678 (46%), Positives = 416/678 (61%), Gaps = 10/678 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q+ +LR L H LY+ +D PEI DAEYD L REL LET+ P L SPTQR Sbjct: 37 EEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQR 96 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG L + H + M SLDN F + + AF +R+ + L + + C+ K+DGLA+ Sbjct: 97 VGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNAL-PDAPSAFWCDPKMDGLAL 155 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YENGV SA TRG+G GE +T+ +RT+R +PL L G+++P R+EVRGEV + +A F Sbjct: 156 EVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADF 215 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL---EGGELPDT 238 E++N GGK+FANPRNAAAGS+RQLD +TA RPL F YGVG + G T Sbjct: 216 EQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTT 275 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H G + + ++WG LC S +EV A+Y + R +L +IDGVV K++ QE Sbjct: 276 HSGLMARLREWGFDTPPEGRLCASPDEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQE 335 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LGF ARAPRWA+A KFPA + T + D+ QVGRTG +TPVA LEPV V GV VS ATL Sbjct: 336 ALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATL 395 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI GL +GD V+++RAGDVIP+VV ++ ER D R VFP +CP C S V R Sbjct: 396 HNEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDSPVVRP 455 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 +GE RC + C A R++S+ HFVS+ +DV G+G++ + QLV+ +V +P LF LT Sbjct: 456 QGEVAHRCVNVM-CPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDGGHVTSPVGLFLLT 514 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKE-TTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 L ERMGP SA N V AL+ A+ T R + ALGIR VGE TA LAA F L+A Sbjct: 515 KLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQTARTLAANFTDLDA 574 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL----AEGVHWPAPIVINAEE 593 L A E LQ++PD+G VA + +FFA E N ++ L P A+ Sbjct: 575 LREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGLWPKRQDAPPASEGADA 634 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I P G V+ TGSL+++ R +A+ GA +A SV+K DL++ G GSKL KA+ Sbjct: 635 IVLPLQGLKVLFTGSLTRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKAR 694 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LGI V++EA+ +L S Sbjct: 695 KLGIRVMEEADFFAMLAS 712 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 281/666 (42%), Positives = 394/666 (59%), Gaps = 6/666 (0%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + L L H LY+V+DAPEI D EYD LMRE+ + E +HP+LI DSP++RVG A Sbjct: 10 DRYYWLVDELNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKRVGGA 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 L AF ++ H PMLSL++VF + + +R + + + WCCELK+DGLAVS+++ Sbjct: 70 VLDAFEKVTHAKPMLSLEDVFSKNELHDWLQRAAEGVG-QPWIPWCCELKIDGLAVSLIF 128 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 E+G V A+TRGDG GED+T N++T++ +PL+L G ++P LE+RGEV++ + GF ++N Sbjct: 129 EDGKFVQASTRGDGVVGEDVTENLKTVKDLPLRLLG-DVPGHLELRGEVYMGKDGFAQLN 187 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 G +FANPRNAAAGSLRQLD + AKR L F Y V E L + L Sbjct: 188 AAREEAGLPLFANPRNAAAGSLRQLDTSVAAKRNLRLFTYYVQDAESYGL-HSQSEILEW 246 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K GLPV E+ E L F + +R +L + DG V K ++ LG + Sbjct: 247 LKARGLPVQKAWRRAETETEALDFLERWSGERFSLPYATDGAVFKADATEYWTVLGNNVK 306 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 PRWAVA+K+P +E+ T + +E +GRTG +TPVA LEPV ++G +V A+LHN +EI+ Sbjct: 307 TPRWAVAYKYPPEERKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEEIQ 366 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R +R+GD+V +R+AG++IP++V V ++ R P CPVCG+ V ++ GE R Sbjct: 367 RKDIRVGDRVWVRKAGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVALR 426 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C AQ + L HF SR+ M++ G+GD++ +QLV V +DL+ L L L Sbjct: 427 CLN-RSCPAQLTQGLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVRL 485 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 +RMG KSA ++ A+ K+KE + ALGIREVG AA LA F +L+ + AA E Sbjct: 486 DRMGEKSAGKLLQAIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSLDEIAAADEER 545 Query: 546 LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVL 605 L V VG V+A + FF EE NR +I L GV + E P AGKT V Sbjct: 546 LAAVEGVGPVIAGSIKTFFGEEHNRRLIDGLREAGVSMRSETA--PEAPIGPLAGKTFVF 603 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG LS+MSR A+ + + G K SVSKKT V+ GEA G K KA L + ++E E Sbjct: 604 TGELSRMSRAQAQELVTQRGGKSVNSVSKKTSYVVVGEAPGGKAEKALRLNVPTLNEEEF 663 Query: 666 LRLLGS 671 ++ + Sbjct: 664 FAMIDN 669 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 263/671 (39%), Positives = 394/671 (58%), Gaps = 9/671 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ +++ LRT L Y+ DAPE+ D YD+ L ELE PE++TPDS TQ Sbjct: 6 LDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPDSITQ 65 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F+++ H +PMLS+ +VF ++ F++R+Q + V + ELK+DGL+ Sbjct: 66 RVGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVG--HPVEYNVELKIDGLS 123 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y++G LV A+TRG+G GED+T+N R I IP L P +EVRGE ++ + Sbjct: 124 LSLEYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPE---PLTIEVRGECYMGKEA 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F K+N++ G VFANPRNAAAGSLRQLDP++T KR L+ F Y + Sbjct: 181 FAKLNQEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNP--PREITSQH 238 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + + G ++ + +EV F + R +L + IDG+V+KV+ L+ ++QL Sbjct: 239 QAIERMHELGFHTNETGRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQL 298 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G + PRW +A+KFP +EQ T VRD+ + VGRTG +TP A ++PV +AG V+ A+LHN Sbjct: 299 GNTVKVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHN 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D + G+RIGD V + +AGD+IP++ VVLS+RP D+ PT CP CG + +E Sbjct: 359 PDYLNEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLED 418 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ +E + HF SR AM++ G+G KI+ QL+ K+ VH ADL+ LT Sbjct: 419 EVALRCINP-SCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTED 477 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L+ KS N++ A++ +K+ + + LGI VG A +A F LE + + Sbjct: 478 DLAQLDHFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMS 537 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE-IDSPFA 599 ++++ + +G+ A + +FA+ + +I EL G++ EE D+PF Sbjct: 538 LGVQDIASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMDYLGADEPEEAPDNPFK 597 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 KTVVLTG L +R + +L LGAKV GSVS KTD VI G+ AGSK KA++LG+ + Sbjct: 598 DKTVVLTGKLEHYTRSEFTKKLQALGAKVTGSVSHKTDYVIYGKDAGSKYNKAEQLGVPL 657 Query: 660 IDEAEMLRLLG 670 + E E + + Sbjct: 658 LTEEEAIAQIE 668 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 365/717 (50%), Positives = 475/717 (66%), Gaps = 47/717 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +++ + LR+TL+HH +LY+V+DAPE+PDAEYDRL +EL+ +E +P L T DSPTQ Sbjct: 31 LQTAAARAAWLRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAMYPALRTADSPTQ 90 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEES--FLAFNKRVQDRLKNNE---KVTWCCELK 115 RV F +RH VPMLS+ D E+ +AF+ RV+ L+ + +++ ELK Sbjct: 91 RVLGQVRDGFVVVRHAVPMLSIRTETDTEASGAVAFDARVRRELELPDDAPPISYATELK 150 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHG-------------- 161 DGLA+++ YE+GVLV AATRGDG +GED+T N+RTI IPL+L Sbjct: 151 FDGLAINLRYEHGVLVQAATRGDGESGEDVTQNIRTIGQIPLRLRWAPTLGADAHSLPPE 210 Query: 162 ----------------ENIPARLEVRGEVFLPQAGFEKINEDARR------TGGKVFANP 199 + PA LEVRGEV++ + FE +NE R G K F NP Sbjct: 211 GARFALGRPGGETGAPDLAPAVLEVRGEVYMRRDDFEALNERQRERIARGDKGEKTFVNP 270 Query: 200 RNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTL 259 RNAAAG++RQLDP I A+RPL+FF YG+G ++G LP TH G L GLPV + Sbjct: 271 RNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVQGWALPHTHAGLLDALAAAGLPVCAERAV 330 Query: 260 CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 + A+ ++AF+ ++ R +L FDIDGVV KV+SLA Q++LGFV R PRWAVA K+PAQE Sbjct: 331 VQGADGLVAFHQRIGALRDSLAFDIDGVVYKVDSLALQQRLGFVTREPRWAVAHKYPAQE 390 Query: 320 QMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRR 379 QMT + +E QVGRTG +TPVARLEPV V G VSNATLHN DE R +R+GD V++RR Sbjct: 391 QMTRLLGIEIQVGRTGKLTPVARLEPVFVGGTTVSNATLHNEDEARRKDVRVGDTVIVRR 450 Query: 380 AGDVIPQVVNVVLSERPEDTREVVFPT-----HCPVCGSDVERVEGEAVARCTGGLICGA 434 AGDVIPQVV VVL +RP+D E CPVCGS + R EGEA RCTGGL C A Sbjct: 451 AGDVIPQVVGVVLEQRPDDVGEPFDLYQRLGGRCPVCGSAIARPEGEADWRCTGGLFCAA 510 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQ 494 QRK+++ HF SRR MD++G+GDK++DQLV+ + T +L+KL KLT LERMG KSA Sbjct: 511 QRKQAILHFASRRMMDIEGLGDKLVDQLVDAGVIRTLPELYKLGVAKLTALERMGEKSAV 570 Query: 495 NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGI 554 N+V ALEK+K+TT ARFL++LGIR+VGEATA LA +FG L+ + AS+++LQ VPDVG Sbjct: 571 NLVAALEKSKQTTLARFLFSLGIRQVGEATAKALARHFGALDRVMDASVDQLQAVPDVGP 630 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS-PFAGKTVVLTGSLSQMS 613 +VA + FF + NR V+ +L A G+HW A + P AGKT+VLTG+L + Sbjct: 631 IVALSIRTFFDQPHNREVVEQLRAAGIHWAEHEASAAADAAELPLAGKTLVLTGTLPTLG 690 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 RD AK + G KV+GSVSKKT V+AG AGSKL KA+ELG+ ++DEA +L LL Sbjct: 691 RDAAKDLIEAAGGKVSGSVSKKTHFVVAGAEAGSKLDKARELGLVILDEAGLLALLN 747 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 288/665 (43%), Positives = 407/665 (61%), Gaps = 8/665 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++ ELR LR+H YLY+V+D PEI D E+DRL R L +LE ++PE++TPDSPTQRV Sbjct: 5 EIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSPTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F +I + PMLSL N F E F++RV + V + ELK+DGL+++ Sbjct: 65 GGKASDDFRKIPFKKPMLSLANAFSAEELRDFDRRVHGGIGAMP-VEYITELKIDGLSMN 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YENG L+ TRGDG GED+TSNV+TI+ IPL + EN PA +EVRGEV++P+ F Sbjct: 124 LIYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYI--ENAPAYMEVRGEVYMPRKSFI 181 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +NE+ G FAN RNAAAGSLRQLDP++TA R L FF Y +G EG ++ + Sbjct: 182 ALNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDIS-SQDDL 240 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 LLQ KK+ V+ +S E V+ + E+ R L +D DG+VIKVN QQE LG Sbjct: 241 LLQLKKFHFRVNPHYRKWDSIEGVITGVREWEKKRRELDYDTDGMVIKVNDFRQQELLGA 300 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + P+WA+A+K+P +E +T + + +GRTG +TP A L PV +AG V ATLHN D Sbjct: 301 TGKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRATLHNLD 360 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I +R GD V+I +AG++IP++ V+ +R +E P +CPVCG+ + R++ EA Sbjct: 361 FIREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIRRIDTEA 420 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC CG +E L HF SR AMD++G+G ++D L+ V AD + L L Sbjct: 421 AFRCINP-ACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYALKEDDL 479 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 +ERMG KSA N++ A+ +KE A+ L+ LGIR +GE + A YF T++A+ AA Sbjct: 480 RQIERMGEKSAANLITAIRASKERGLAKLLFGLGIRFLGEKGSELAAHYFHTIDAIMAAD 539 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E +++ +G + A ++++F +E N +I++L GV E F+G++ Sbjct: 540 VETIEETEGIGKITAKSLYDYFHDEKNIEMINKLKNAGVLMEEIK---EESESGMFSGES 596 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG L+ M R +A + LG SV+ T LV+AGE AGSKL KA+ GI VIDE Sbjct: 597 VVLTGKLAVMGRREASELIKRLGGTTQSSVTNITTLVVAGEDAGSKLEKARAKGIPVIDE 656 Query: 663 AEMLR 667 E L+ Sbjct: 657 QEFLK 661 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 278/665 (41%), Positives = 401/665 (60%), Gaps = 4/665 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 Q EL + H Y+V P I D E+D LM +L ++E +HPE I+ SPTQRVG Sbjct: 7 HQSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASPTQRVGE 66 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + H PMLSL N + ++ F RV+ L ++ V + CELK+DG+A+S Sbjct: 67 MLTEGFQTVAHRTPMLSLANSYSKDEVQDFIHRVKK-LTRSQDVAFSCELKMDGIAISAQ 125 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 +E G+ V TRGDG G+DIT N+RT+ A PL+L G + P LEVRGE+F+P+ F+K+ Sbjct: 126 FEKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEIFMPKQVFQKL 185 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G ++ANPRNAAAGSL+ LDP T +R L YG+G + + + Sbjct: 186 NAEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQ-DSQDALTSQFACHA 244 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 K +GLP+ +V C + EE+ F KV R +L F+IDGVV+K++SLA+Q++LG Sbjct: 245 LLKSYGLPILHQVEKCHTLEEIWEFVEKVRTLRASLPFEIDGVVVKLDSLAEQKRLGSTG 304 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PRWAVA+KF A++ T + + QVGRTG +TPVA L+PV +AG ++ ATLHN +E+ Sbjct: 305 KNPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLHNEEEV 364 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 R +R GD V+I + GDVIP+VV+V +R D+ PTHCP CG+ V R E Sbjct: 365 LRKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPSCGALVARSVDEVAV 424 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C Q+ L +F + AMD++ MG+K+++QLV +V P+D++ LT+ +L Sbjct: 425 KCPNTLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKRPSDIYALTSEQLFQ 484 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE KS +N++ ++EK+K+ +F+RF+ ALGI+ VGE TA LA G + L + E Sbjct: 485 LEGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAKRAGNVHILMQMTTE 544 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 EL ++ +G VA+ + +FA+ N+ I LL GV I+ + PF KT V Sbjct: 545 ELLQIEGIGEKVATAIVEYFADARNQEEIQLLLQRGVLPQEVKSISHKG--HPFDAKTFV 602 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG+L Q +R A + E G KV SVS KTD ++AGE GSKL KA+ L + ++ E E Sbjct: 603 LTGTLKQYTRPAAATLIKERGGKVTNSVSSKTDYLLAGEDPGSKLDKAKSLQVRILTEEE 662 Query: 665 MLRLL 669 +L Sbjct: 663 FQAML 667 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 326/698 (46%), Positives = 428/698 (61%), Gaps = 35/698 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L + H+ Y+ DAP + DAEYD L +E + P L DS +++V Sbjct: 28 EAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDSLSEKV 87 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGLA 120 GAAP F ++ H+VPMLSL N F +E + F RV+ L +++V + CE K+DGL+ Sbjct: 88 GAAPSEKFGKVAHKVPMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPKIDGLS 147 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YENG L AATRGDG+ GED+T NVRTI IP +L G+ +P ++VRGEV++ +A Sbjct: 148 CSLHYENGRLTVAATRGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVYMAKAD 207 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N KVFANPRNAAAGSLRQLD ITA RPL FF Y G +T Sbjct: 208 FEALNARQAAAEEKVFANPRNAAAGSLRQLDSSITASRPLKFFAYAWGEASDL-PAETQF 266 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 G + F +WG + + + + A ++A Y +E R LG+DIDGVV KVNSL Q +L Sbjct: 267 GVVEAFARWGFTTNPLMVVAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLELQRRL 326 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GFV+R+PRWA+A KFPA++ T + D+E QVGRTGA+TPVA+L PV V GV+VS+ATLHN Sbjct: 327 GFVSRSPRWAIAHKFPAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSSATLHN 386 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI R +RIGD VV++RAGDVIPQVV V+ +RP ++ FPTHCP CGS R Sbjct: 387 EDEIARKDVRIGDTVVVQRAGDVIPQVVRVIEEKRPAGSKPYEFPTHCPACGSHAVREVD 446 Query: 421 ------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K + E + +PAD+ Sbjct: 447 TKSGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWGLIASPADI 506 Query: 475 FKLT------AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 F L +L + G SA N+ A+ + + RF++ALGIR VGE A L Sbjct: 507 FTLETRNARSLQRLENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGIRHVGETNAKRL 566 Query: 529 AAYFGTLEALEAA----------------SIEELQKVPDVGIVVASHVHNFFAEESNRNV 572 ++GT+EALEA + +E+ + +G VVA V FF E NR V Sbjct: 567 MRHYGTVEALEAGALAAVIPGEEHPKGNEAWQEMIGIDGIGDVVAEAVIEFFGEPRNREV 626 Query: 573 ISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 ++ LL E P + SP +GKTVV TGSL +M+RD+AKA LGAKVAGSV Sbjct: 627 VTALLKEV----TPEPMEQVAAASPVSGKTVVFTGSLEKMTRDEAKAMAERLGAKVAGSV 682 Query: 633 SKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 S KT+LV+AG AGSKL KAQ LG++VI E E L+G Sbjct: 683 SAKTNLVVAGPGAGSKLEKAQALGVQVITEDEWFELVG 720 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 317/677 (46%), Positives = 423/677 (62%), Gaps = 10/677 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + I+++ LR L H YHV D P I D EYDR+M+ L +ET+ PEL TPDSPT+ Sbjct: 8 FDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELSTPDSPTR 67 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+GA L AF H +PM SLDN F ++ + F+ R L ++ + + E KLDG+A Sbjct: 68 RIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTAKILNTSD-IRYTVEPKLDGVA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 V + YE G L A TRGDGT GE IT N RTI ++PLKL IP LEVRGEV + Sbjct: 127 VELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLAPAGNGTIPDVLEVRGEVIIN 186 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG---GE 234 FE +N+ TG +FANPRNAAAGSLRQLD R+TAKRPL F YGVG + Sbjct: 187 SKDFEGLNKKRLATGEPLFANPRNAAAGSLRQLDSRVTAKRPLEIFVYGVGRAQELMANF 246 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 +H L K+ G ++ + S EVL + E R L ++IDG+VIKV+ + Sbjct: 247 DIGSHSALLESLKRLGFRINPLIRSGLSLTEVLDRFKAFETMRQDLDYEIDGMVIKVDDI 306 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 QE+LG AR+PRWA+A+KFPA E+ T + D+ QVGRTG +TPVA LEPV++ GV+V+ Sbjct: 307 VFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPVNIGGVMVA 366 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 A+LHN DEI+ +RI D V+++RAGDVIP+VV V + R R V PTHCPVC S Sbjct: 367 RASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPTHCPVCHSP 426 Query: 415 VERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 V R++ EA +C C AQ K+ LKHFVS+ D++G+G K+IDQLV++ V + ADL Sbjct: 427 VRRLDNEAAVKCINA-SCKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDRTLVGSFADL 485 Query: 475 FKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 F L L ++RMG KSA N+V A+E++K RFL+ALG+ GE+ A L++ F T Sbjct: 486 FTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAAQLLSSTFFT 545 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 LEAL AS E L + VG A V FFA N+ I+ ++ GV V+ + + Sbjct: 546 LEALLKASAEALGAIEGVGPKTADSVVAFFANPDNQETIARMMENGVVIENHTVVESAAL 605 Query: 595 DSP--FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 D+ F+ K VVLTG+L ++R +AK RL E GA+V SVSK TD+++AGEA+GSKL KA Sbjct: 606 DNATFFSEKRVVLTGTLGTLTRSEAKQRLEEQGARVVSSVSKNTDILVAGEASGSKLVKA 665 Query: 653 QELGIEVIDEAEMLRLL 669 + LG+ ++DE L L Sbjct: 666 RSLGVTIMDEQTFLEHL 682 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 290/659 (44%), Positives = 399/659 (60%), Gaps = 4/659 (0%) Query: 13 TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQ 72 + +H + Y+V+D PE+ D EYDRL REL ELE++ PEL+T DSP++RVG A F+ Sbjct: 22 ELIAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAP 81 Query: 73 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-KVTWCCELKLDGLAVSILYENGVLV 131 +RH VPMLSL+N F E F R++ L ++ + + E KLDGLAV ++YE G Sbjct: 82 VRHAVPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFT 141 Query: 132 SAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRT 191 +TRGDG GE+I++N++TI IP++L GE PARL++RGEV L AGF +NE + Sbjct: 142 LGSTRGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQN 201 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL 251 G +FANPRNAAAGSLRQLDP I+A RPL FF YGV + + + G Sbjct: 202 GESLFANPRNAAAGSLRQLDPAISAARPLEFFAYGVADAD-PLAVGSQQQVIELLAALGF 260 Query: 252 PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 LC V+A + ++ + R L ++IDG+V KVN LA Q++LG R PRWA+ Sbjct: 261 KTIPHGHLCPDLAAVIAHFQQLAQRRSQLPYEIDGMVAKVNELALQKRLGSKTRTPRWAI 320 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A KFPA + T + VE+QVGRTGA+TPVARLEPV V GV VS ATLHN EI R LR+ Sbjct: 321 AAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIRRKDLRL 380 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 D V+++RAG+VIP+VV + +R RE+ PTHCP CGS + R E V RC Sbjct: 381 EDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPECGSQLIRPAAEVVLRCPNHRH 440 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQR +L HF + +D++G+G K+++QL V D+F+L A +L L G K Sbjct: 441 CPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLAPLPGWGEK 500 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 A NV+ A+ + + R L ALGIR +GE TA LA FGTLE L AA E+ + Sbjct: 501 KAANVIAAVNRRRRVELGRLLAALGIRHIGEVTAQLLARRFGTLEGLLAAGEEDFLDIEG 560 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G A+ + +FA NR ++ +L E P + P + + TG+LS Sbjct: 561 IGPQAAAALVTYFAAPGNREILRQLQEELGLEIQPEGGPEQS--QPLGDRVFLFTGTLSN 618 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 SR +AKAR+ ELG +VA S++++ ++ G GSKL KA+E+G+ ++DE + RLL Sbjct: 619 WSRSEAKARVKELGGEVATSLNRRVTHLVCGSKPGSKLPKAREMGLTILDEEQFRRLLA 677 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 268/678 (39%), Positives = 397/678 (58%), Gaps = 14/678 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E E + +LR +R+H++ Y+V+ P I D EYD+L L+++E++ PELITPDSPTQR Sbjct: 29 EDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPELITPDSPTQR 88 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V + F Q++H PMLSLDN ++EE F++RV++ + + + + E K DG + Sbjct: 89 VPSELTKEFPQVKHLAPMLSLDNSYNEEDLREFDRRVREAVG-IDIIEYAVEPKFDGAGI 147 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIP-ARLEVRGEVFLPQAG 180 S++YE + V ATRGDG GEDIT N+R I+ +PL R+E+RGEV + + Sbjct: 148 SLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYGIDRIEIRGEVLINKEK 207 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD--- 237 F++IN G ANPRNAAAGSLR DP+ AKR L F Y + + + Sbjct: 208 FKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITYAVDKDGNNLLG 267 Query: 238 ----THLGRLLQFKKWGLPVS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 H + + G + +C +EV+ + + E R ++IDG+VIKVN Sbjct: 268 NKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYPYEIDGMVIKVN 327 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 ++ ++LG + PRWA+AFKF A++ T + V FQVGRTGA+TPVA+LEPV + GV Sbjct: 328 DISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVAKLEPVEIGGVT 387 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS+ +L N D I+ +R+GD V+I RAGDVIP VV VV R + + FP CP CG Sbjct: 388 VSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKPIQFPKECPSCG 447 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S + + GEAV RC + C AQ E + +F S+ AMD+ G+G+ I + + ++ + Sbjct: 448 SPLVKPAGEAVWRCIN-INCPAQVVERIIYFASKDAMDIRGLGEANIRKFYQLGFLRSIP 506 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 D+++L K+ LE G KS +N+ A+E++K R + LGIR VG+ TA LA Sbjct: 507 DIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGKVTARTLAENI 566 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +E L+ S+E+L+++PDVG VVA +++FF N +I EL GV E Sbjct: 567 NCVEDLKDWSVEDLERLPDVGYVVAHSIYDFFHNPDNIKMIQELKRLGVQTCKEK---EE 623 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 +++ F GKT V TG+LS SR+ A+ + LG + SVS+KT V+ GE GSK KA Sbjct: 624 VVENIFEGKTFVFTGTLSCCSREIAQEIVERLGGHASSSVSRKTSYVVVGENPGSKYRKA 683 Query: 653 QELGIEVIDEAEMLRLLG 670 LG++++DE + + ++ Sbjct: 684 LSLGVQILDEKQFIEMIK 701 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 271/677 (40%), Positives = 389/677 (57%), Gaps = 16/677 (2%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +L +R H++ Y+V+D+P I D E+D L EL+ LE+ HP L PDSPTQ VG Sbjct: 43 VRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 F+ + H MLSLDN FD + A+ +RV+ + ++ + CELK+DGLA+++ Sbjct: 103 GTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAH--YLCELKIDGLAINL 160 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAG 180 LY +G L A TRGDG TGED+T NVRT+ +P +L G + +PA +E+RGEVF Sbjct: 161 LYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVDE 220 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N G FANPRN+AAGSLRQ DPR+T RPL C+G+G EG E P Sbjct: 221 FAQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFE-PKQQS 279 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + WGL VS + + +EVL + R + +IDGVV+KV+ ++ Q +L Sbjct: 280 ESYAALRAWGLRVSPHTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRRL 339 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +RAPRW++A+K+P ++ T + D++ VGRTG +TP A +EPV VAG V+ ATLHN Sbjct: 340 GATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLHN 399 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE-RVE 419 AD++ G+ IGD+VVIR+AGDVIP+V+ V+ R RE V PT CP CG+ + + E Sbjct: 400 ADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQKE 459 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 G+ RC C QR+E L R+A D++ +G + + L+ V DLF L Sbjct: 460 GDVDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLNE 519 Query: 480 GKLTGL------ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L + + ++ LE AK+ R L AL IR VG A LA FG Sbjct: 520 EALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREFG 579 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+ ++ AS EEL VG +A+ V +F + +R ++ + GV E Sbjct: 580 SLDRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRMADE---RDES 636 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 I+ G ++V+TGSL SRD+AK ++ G + AGSVSKKT V+ GE+ GSK KA Sbjct: 637 IERHLTGLSIVVTGSLEGFSRDEAKELIMARGGRAAGSVSKKTAFVVVGESPGSKYDKAV 696 Query: 654 ELGIEVIDEAEMLRLLG 670 ++ + V+DE LL Sbjct: 697 QMKVPVLDEDGFRVLLE 713 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 306/671 (45%), Positives = 418/671 (62%), Gaps = 7/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ ELR +R+H + Y+V+D PEIPDAEYD L REL+ELE ++P L DSP+++ Sbjct: 12 EQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADSPSRQ 71 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA PLA F+ + H +PMLSL+N F+E F R+ L ++ E KLDGLAV Sbjct: 72 VGAEPLAQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPKLDGLAV 131 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--GENIPARLEVRGEVFLPQA 179 ++YE+G+ +TRGDG TGE+IT+N+ TI IP +L G PARLE+RGEV L Sbjct: 132 ELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGEVCLSIT 191 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 GF+++N G +FANPRNAAAGSLRQLDP ITA RPL FF YG + T Sbjct: 192 GFKELNRRRGEAGESLFANPRNAAAGSLRQLDPAITADRPLEFFAYGAADSAALAVT-TQ 250 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L Q +GL + +C E LA + ++E R + ++IDG+V+KVN LA Q++ Sbjct: 251 AQLLEQLHAFGLQLIPHGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLKVNDLALQKR 310 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG AR+PRWAVA KF A + T + VEFQVGRTGA+TPVA LEPV V GVLVS ATLH Sbjct: 311 LGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGVLVSRATLH 370 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+R LR+ D V+++RAG+VIP+VV V +R D + + P +CP C + R E Sbjct: 371 NEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPANCPECDHALIRKE 430 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 GEAV RC C AQR SL HF S+ +D+DG+G K ++ LV+ V D+++L Sbjct: 431 GEAVRRCPNPQ-CPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLVGDIPDIYRLRP 489 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L G KSA V +A+ AK AR L ALGIR VGE A LA +F +LEAL+ Sbjct: 490 EQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVLARHFPSLEALQ 549 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E+ +V +G VA+ + FF + + ++++L G+ + P Sbjct: 550 QAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELGLTISPEEQPAQQ---LPLQ 606 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 + + TGSL+ MSR++AKAR+ ELG +VA +++K ++ G+ GSKL KA+EL +E+ Sbjct: 607 NRVFLFTGSLAGMSRNEAKARVKELGGQVATGLNRKVTHLVCGDKPGSKLTKARELELEI 666 Query: 660 IDEAEMLRLLG 670 + EA+ RLLG Sbjct: 667 LTEADFARLLG 677 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 312/689 (45%), Positives = 419/689 (60%), Gaps = 25/689 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + + ++ LR + H+ +LY+ DAP I DA +D LMRELR+LE +HPE P SPTQR Sbjct: 13 DDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYDPTSPTQR 72 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F+ + H M SLDN D + A+ R + L + V CCELK+DG + Sbjct: 73 VGGYVGEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTD--VPLCCELKIDGSGI 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR------LEVRGEVF 175 ++ YE+G L+ AATRGDG GED+T+N+RT+R +PL+L E + A LE+RGEV+ Sbjct: 131 AVTYEDGRLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALELRGEVY 190 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 +P+ F +N A R G + FANPRNAAAGSLRQ DP ITA+R L+ F Y L Sbjct: 191 MPKKSFNALNAAADREGRQEFANPRNAAAGSLRQKDPTITAQRDLSTFTYATASNAALTL 250 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 P L + G V+ V LC S +EV AF + + R +L ++IDGVV+KVN + Sbjct: 251 PG-QWELLEWMRNAGFHVNPDVRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVKVNDFS 309 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q++LGF ARAPRWA+AFKFP +E+ T +RD+ QVGRTGA+TPVA LEPV V+G +VS Sbjct: 310 LQDRLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSGSVVSR 369 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHN DE+ R +R+GD V++R+AGDVIP+V+ VLS RP D + PT CP CGS V Sbjct: 370 ATLHNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPSCGSPV 429 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 R EG A+ RC L C AQ E L H+ SR A+D++GMG+++I +L+E V AD + Sbjct: 430 VREEGGAILRCV-SLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDVADYY 488 Query: 476 KLTAGKLTGLER-----------MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 LT L L+ +G A +V ++++K FAR L+ LGIR VG+ T Sbjct: 489 HLTEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGIRHVGKTT 548 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A +A + ++EAL A +++L + +G ++A + F N VI LLA GV Sbjct: 549 AEAIAQAYPSIEALREAKMDDLAAIEGIGPIIAESLFVFLRTPQNVQVIDRLLAAGVVM- 607 Query: 585 APIVINAEEIDSPFAGKTVVLTGSL--SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG 642 +G T VLTGSL S M+R +A L +GAKV+GSVS KT VIAG Sbjct: 608 -EEAALTPRAPQTLSGLTFVLTGSLVQSGMTRTEAGDALKAMGAKVSGSVSGKTSFVIAG 666 Query: 643 EAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 EAAGSK KA LG+ VIDEA L +L + Sbjct: 667 EAAGSKRDKAVSLGVPVIDEAAFLHILET 695 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 338/692 (48%), Positives = 441/692 (63%), Gaps = 29/692 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E ++L L + H+ LY+ DAP I DAEYD L R +E ++PEL+ DSP+ Sbjct: 22 LEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSPSH 81 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDG 118 RVGA P F ++ H+VPMLSL N FD+E F R++ L E+ + E K+DG Sbjct: 82 RVGAQPADGFGKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKIDG 141 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+ ++ YE G V ATRGDG GE++T N++TI IP +L G+NIP +EVRGEV++ Sbjct: 142 LSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYMSH 201 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F +NE R G VFANPRNAAAGSLRQLD +ITA RPL FF Y G + DT Sbjct: 202 EDFAALNERQREAGKPVFANPRNAAAGSLRQLDAKITASRPLRFFAYTWGEMSDL-PADT 260 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 G + F+KWG V+ C++ E ++ FYH +EE R TLG+DIDGVV KV+ L Q Sbjct: 261 QSGVMDAFRKWGFTVNPLFGRCDTVEALIDFYHDIEERRATLGYDIDGVVYKVDRLDWQN 320 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LGFV+R+PRWA+A KFPA++ MT + +E QVGRTGA+TPVARL PV V GV+VSNATL Sbjct: 321 RLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVVVSNATL 380 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HNADEIERLG+R GD VV++RAGDVIPQ+V VV +RP ++ VFP CP CGS R Sbjct: 381 HNADEIERLGVRPGDTVVVQRAGDVIPQIVRVV-EDRPRGKKKFVFPDTCPECGSHAVRE 439 Query: 419 EG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 +AVARCTGGL+C AQ E L+HFVSR A D++G+G+K I E + P Sbjct: 440 VNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGLIKKPD 499 Query: 473 DLFKLTAGK------LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 D+F L A L E G SA+ + +A++ +E RF++ LGIR VGE A Sbjct: 500 DIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVGETNAR 559 Query: 527 GLAAYFGTLEALEAA----------SIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 LA +GTL+ E + EL + VG V+A + +FFAE+ NR V+ L Sbjct: 560 LLARSYGTLDHFEEQMRAAADREDEAYAELLSIDGVGEVLAESIVDFFAEKHNREVLDGL 619 Query: 577 LAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKT 636 GV + + +E SP AGKTVV TGSL +M+R +AKAR +LGAKVAGSVS KT Sbjct: 620 REAGV---KGVPLPKQETSSPVAGKTVVFTGSLEKMTRSEAKARAEQLGAKVAGSVSAKT 676 Query: 637 DLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 D+++AG AGSKLAKA+ELGIE++DE + + L Sbjct: 677 DILVAGADAGSKLAKARELGIEILDEDQWIEL 708 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 298/765 (38%), Positives = 411/765 (53%), Gaps = 98/765 (12%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +EQ LR L+ Y Y+V+D P + DA YD L+REL+ELE+++P+LI DSPTQRV Sbjct: 7 EVEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRV 66 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDR--------------------- 101 G P F ++H +P+ SL+N F+ + ++ +R Q + Sbjct: 67 GEKPATKFVSVKHNIPLYSLENAFNIQELKSWQERWQRQTLLENQRLTLPLRGEVKIKNS 126 Query: 102 LKNNEK-----------------------VTWCCELKLDGLAVSILYENGVLVSAATRGD 138 + ++ V + CELK+DG A+++ YENG+LV ATRGD Sbjct: 127 IDESDNFSTVNSLAPVITGSNFDEIDLASVDYICELKIDGSALALTYENGLLVRGATRGD 186 Query: 139 GTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFAN 198 G GEDIT NV+TI +IPLKL +N P +EVRGE FL FE IN + + G +FAN Sbjct: 187 GIMGEDITQNVKTINSIPLKLKVDNPPLLVEVRGEAFLSINVFENINAEREKIGEIIFAN 246 Query: 199 PRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---DTHLGRLLQFKKWGLPVSD 255 PRNAAAG+LRQLD +I AKR L FF Y + + E T L KK G V+ Sbjct: 247 PRNAAAGTLRQLDSKIVAKRRLDFFAYTLYLEENESNFLQFYTQSQCLELLKKLGFKVNP 306 Query: 256 RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 +C S EV A+Y ++ R L + DGVV+K+NSL+ QE+LGF + PRWA+A K+ Sbjct: 307 NGQVCSSLNEVEAYYQYWDKQRENLPYLTDGVVVKLNSLSLQEKLGFTQKYPRWAIALKY 366 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKV 375 PA+E T V+ V QVGRTGAITPVA L+PV +AG V A+LHN+D + L L IGD V Sbjct: 367 PAEEIPTIVQGVTVQVGRTGAITPVAELKPVQLAGTTVQRASLHNSDRLAELDLHIGDTV 426 Query: 376 VIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 ++R+AG++IP+VV V+ RP+ + PTHCP C + + EAV RC C A Sbjct: 427 IVRKAGEIIPEVVRVLPELRPKKAQRFQMPTHCPECSQPLIKPRNEAVTRCINT-SCPAI 485 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 + SL H+ SR A+D++G+G+K++ QLV V + ADL+ LT LT LERMG KSA Sbjct: 486 LRGSLAHWASRAALDINGLGEKLVQQLVNSGLVKSVADLYNLTMEDLTSLERMGKKSANK 545 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 ++ A+ +K + R LY LGIR VG A L F T+ L A +++ V +G Sbjct: 546 LIEAMGTSKAQPWRRVLYGLGIRHVGTVNAELLTQKFPTVAQLSQAKATDIETVHGIGPE 605 Query: 556 VASHVHNFFAEESNRNVISELLAEGVHWPAP----------------------------- 586 +A +V +F +N+N++ L GV Sbjct: 606 IAQYVEQWFRVPANQNLVERLKIAGVTMETKDSTSGMAKLTETVLAIQNLAARQNLVARQ 665 Query: 587 ---------------------IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELG 625 E GKT VLTG+L M RD+AK + G Sbjct: 666 NLENLVERLKIAGVTMETKDSTSDVVEVQSGLLRGKTFVLTGTLPTMRRDEAKNLIQNAG 725 Query: 626 AKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KV SVS KTD ++ GE GSKL KA++LG++ + E+E+L L Sbjct: 726 GKVTSSVSSKTDFIVVGEDGGSKLEKAKKLGVKELSESELLEALA 770 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 291/669 (43%), Positives = 408/669 (60%), Gaps = 13/669 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +Q++ ELR L Y Y+V+D P + D EYDR +EL +LE + P+ P+S TQRVG Sbjct: 3 QQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 L AF ++ H+ MLSLDN F+ E +AF++RV+ +K + ELK+DGLA+S+ Sbjct: 63 VVLDAFEKVSHKRRMLSLDNAFNLEDLMAFDERVRQSVK---NPEYVVELKMDGLAISLH 119 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y NG V A TRGDG GED+T+NVRTI +IP+ + ++ LEVRGEV +P+ FE + Sbjct: 120 YHNGRFVQAVTRGDGLVGEDVTNNVRTIASIPMHI---DMEGDLEVRGEVIMPKKSFEAL 176 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE R+ G + FANPRNAAAGS+RQLD RI A R L + Y TH L Sbjct: 177 NEQRRKQGEEEFANPRNAAAGSIRQLDSRIAASRKLDAYLYY-FEGAQQHAMHTHEEALE 235 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + + V+ +C++ +EV F ++ E R L ++IDG+V+KVN L + LG A Sbjct: 236 ALEAMRIKVNPLRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGTTA 295 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APR+A+A+KFPA+E +T + D+ VGRTG ITP A LEPV VAG VS ATLHN D I Sbjct: 296 KAPRYAIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTTVSAATLHNEDMI 355 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + +RI D V+IR+AGD+IP+VV + R FP CP CGS + R EA Sbjct: 356 KEKDVRINDDVIIRKAGDIIPEVVRSLPERRNGTQGIYKFPQICPFCGSKLVRFADEAAH 415 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK--LTAGKL 482 C C A+ + HF SR AM++D +GDK I+ ++ +++T D+++ L ++ Sbjct: 416 YCMN-QDCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNTIEDIYELSLHKEEI 474 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 LE KS Q ++ A+E +KE L+ LGIREVG+ A LA +G ++ L AA Sbjct: 475 LALEGFQEKSFQKMILAIEASKERPLEDLLFGLGIREVGKKAARVLAKTYGNIDDLMAAE 534 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 EL + D+G+V A + +FAE N+ +I+ L G+ + E I F GKT Sbjct: 535 EAELTAIKDIGVVTAQSIRAYFAEPKNKELIAHLKGFGLRMDTDKEVIKESI---FTGKT 591 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTG+L + R++AKA L LGA V+GSVSKKTDLVI GEA+GSKL+KA+ELG+ +DE Sbjct: 592 VVLTGTLQYLKRNEAKALLERLGANVSGSVSKKTDLVIYGEASGSKLSKAKELGVATMDE 651 Query: 663 AEMLRLLGS 671 ++ + + Sbjct: 652 EAFMKEVNA 660 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 285/712 (40%), Positives = 390/712 (54%), Gaps = 47/712 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ ++ L +R H + Y+ DAP I DAE+D L R L +E HPEL+ DSPTQ V Sbjct: 50 AVREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQEV 109 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR----VQDRLKNNEKVTWCCELKLDG 118 G AAF+ + H M SL++VF E ++ + V W ELK+DG Sbjct: 110 GGEVSAAFAAVEHLQRMYSLEDVFSLEELESWIAKAEASVAKLGNGTAGPAWLTELKIDG 169 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 LAV++LY +G LV AATRGDG TGEDIT NV TI+ IP +L G N PA +EVRGEVF+P Sbjct: 170 LAVNLLYRDGKLVRAATRGDGYTGEDITHNVLTIKEIPQQLTGGNYPAEMEVRGEVFIPS 229 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F + NE G ANPRNAAAGSLRQ DP TAKRPL + +G+G EG + Sbjct: 230 KAFAEYNEALIEAGKAPLANPRNAAAGSLRQKDPAETAKRPLRMYVHGIGAREGLRTV-S 288 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 Q +WGLP S + S +++L F + + R +L +IDG+V+KV+ A Q Sbjct: 289 QSDTYRQLAEWGLPTSPYFEVLGSLKDILDFIKRYGDKRHSLTHEIDGIVVKVDDFATQR 348 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG+ +R PRWAVA+K+P +E T + D+ VGRTG +TP +EPV VAG V ATL Sbjct: 349 ALGYTSRVPRWAVAYKYPPEEVHTKLLDIAVNVGRTGRVTPFGIMEPVKVAGSTVGMATL 408 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE---VVFPTHCPVCGSDV 415 HN D ++ G++IGD VV+R+AGDVIP++V VL+ R + V PT CP CG+ + Sbjct: 409 HNQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRDQQDPPVRDFVMPTECPACGTPL 468 Query: 416 ER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK-----EYVH 469 EG+ RC C AQ +E + H SR A D++ +G + L + + Sbjct: 469 APGKEGDVDIRCPNSRSCPAQLRERVFHVASRGAFDIEALGWEAAIALTQPAEPVTPPLT 528 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQ------------------------------NVVNA 499 + A+LF+LT L + K ++ + Sbjct: 529 SEANLFRLTREDLADVRIRREKRSKGVATGEFELVPYFYTKGTAKSPSKPTATTEKLFTE 588 Query: 500 LEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASH 559 LEKAK R L AL IR VG + LA FG+++A+ AS EEL V VG V+A+ Sbjct: 589 LEKAKSQPLWRVLVALSIRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVIAAA 648 Query: 560 VHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKA 619 + +FAE+ +R ++ +GV E G TVV+TGSL SRD+AK Sbjct: 649 LKEWFAEDWHREIVDTWAEDGVRMEDE---QDESTPRTLEGLTVVVTGSLEGFSRDEAKE 705 Query: 620 RLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 ++ G K +GSVSK T V+AGE AG+KL KA++LG+ V+DE LL + Sbjct: 706 AILIRGGKASGSVSKNTSYVVAGENAGTKLDKAEQLGVPVLDEDGFRALLAN 757 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 333/723 (46%), Positives = 431/723 (59%), Gaps = 58/723 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + L + H+ Y+ DAP I DA+YDRL R ++E + P L DS +++ Sbjct: 21 TEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDSLSRK 80 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT--WCCELKLDGL 119 VGAAP A F+++ H+VPMLSL N F +E F RV+ L E + E K+DGL Sbjct: 81 VGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPKIDGL 140 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 + S+ YE GVLV AATRGDGT GED+T+NVRTI IP +L G +P +++RGEV++ +A Sbjct: 141 SCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVYMGKA 200 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F +N G VFANPRNAAAGSLRQLDP IT RPL FF Y G E G + Sbjct: 201 DFLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRPLRFFAYAWGQAEPGPPGASQ 260 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + F+++GLP + A +LA Y K+ +R +LG+DIDGVV KV+SLA QE+ Sbjct: 261 HEVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAERASLGYDIDGVVYKVDSLALQER 320 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LGFV+R+PRWA+A KF A++ T + +E QVGRTGA+TPVA+L PV V GV+VSNATLH Sbjct: 321 LGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVVSNATLH 380 Query: 360 NADEIER-----------LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHC 408 N D I + +R+GD VV++RAGDVIPQVV+VVL +RP FP HC Sbjct: 381 NEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAYQFPHHC 440 Query: 409 PVCGSDVERVEG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQL 462 PVC S R +AV RCTGGLIC AQ E L+HFVSR A D++G+G+K Sbjct: 441 PVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEKQAHAF 500 Query: 463 VEKEYVHTPADLFKLTAG------KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALG 516 E + + PAD+F+L A KL E G SAQN+ A+E + RF++ALG Sbjct: 501 YEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIEARRTIALDRFIFALG 560 Query: 517 IREVGEATAAGLAAYFGTLEALEAASI-----------------------------EELQ 547 IR VGE A LA ++G++EAL A+I +E+ Sbjct: 561 IRHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASEETPPTRRRKPQGNEVWQEMT 620 Query: 548 KVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 + +G VVA V FF E NR V+ ELL E P + A SP +GKTVV TG Sbjct: 621 DIDGIGAVVAEAVVEFFREPHNRQVVEELLKEV----TPQPLEAVASTSPVSGKTVVFTG 676 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 SL +M+RD+AKA LGAKVAGSVS KTDL++AG AGSKL KA+ LG++ I E E Sbjct: 677 SLERMTRDEAKAMAERLGAKVAGSVSGKTDLLVAGPGAGSKLEKARSLGVKTITEDEWFD 736 Query: 668 LLG 670 L+G Sbjct: 737 LVG 739 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 273/687 (39%), Positives = 411/687 (59%), Gaps = 28/687 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++Q+ LR LR H Y Y+V D P I D E+D+ + +L+ LE HPE SP+ RVG Sbjct: 4 KEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSPSVRVGG 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F+ I+H M SLDN + E + KR++ + + ++ + CELK DG ++S+ Sbjct: 64 EVTKNFNTIKHINRMYSLDNSYSIEDLRDWEKRIKKIV--DGEIQYTCELKYDGASISLH 121 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG V A TRGDG G+++T+NVRTI+++PL+L G+++PA+ E+RGE+ LP GF K+ Sbjct: 122 YENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDGFHKM 181 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE+ G ++ NPRN A+GSL+ D AKRPL Y + + L Sbjct: 182 NEERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQLAGENLP--VKSQFDSLT 239 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +KWG L S EEV F + + R L ++ DGVVIKVNSL QQ++LGF A Sbjct: 240 LARKWGFKAPQESKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELGFTA 299 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +AP+WA+A+KF A++ T + ++ +QVGRTG+ITPVA LEPV ++G V A+LHNAD+I Sbjct: 300 KAPKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNADQI 359 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 E+L +R+GD+V + + G++IP++V V L++RP+++ V+ THCP C +++ R EG+A Sbjct: 360 EKLDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGDAKH 419 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C + C Q K ++HF+SR+AMD+DG+G + + QLV+ +++ ADL+ LT ++ Sbjct: 420 YCPNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQVLP 479 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA---- 540 LERM KSA+N++N +E +K+ F R L+ LGIR VGE A LA ++ ++AL Sbjct: 480 LERMAQKSAENMINGIEASKQVPFERVLFGLGIRYVGETVAKKLAKHYKNVDALLNMPAE 539 Query: 541 -----------------ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 +EEL VP++G +A + F E +I L G+ + Sbjct: 540 PDKSSIDLFADVSSAADKKMEELTAVPEIGESIAQSLVEFIQNEDQMAIIERLKNTGLQF 599 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 E AGK+ V++G MSR+D K + + G K + S+S KTD +I G+ Sbjct: 600 ALSEEQL-EGQTDKLAGKSFVISGVFE-MSRNDLKKLVEDNGGKNSSSISSKTDYLIRGD 657 Query: 644 AAG-SKLAKAQELGIEVIDEAEMLRLL 669 G SKL KA++LGI +I E E L ++ Sbjct: 658 KMGPSKLEKAEKLGITMISEQEFLAMI 684 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 272/673 (40%), Positives = 408/673 (60%), Gaps = 12/673 (1%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + ++ +LR L + Y Y+V+D P + DA YD L EL++LE +HPELIT DSPTQRVG Sbjct: 6 LRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVG 65 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN-NEKVTWCCELKLDGLAVS 122 P+A F ++ H MLSL++VF E A+ RV+ +EKV + E+K+DGLA S Sbjct: 66 GVPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMDGLACS 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN-----IPARLEVRGEVFLP 177 ++YENG LV A TRGDG GED+TSNVRTI ++PL L + EVRGE+ + Sbjct: 126 LIYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRGEIVMF 185 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FE +N + G K +ANPRN AAG++RQLDPR+ A+R L F Y + + E+P Sbjct: 186 KKDFELLNAQLEQEGKKTYANPRNLAAGTIRQLDPRLVAQRKLYFLAYDLLRDDPAEVP- 244 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T ++ G + + +S +E++ F E+ R L ++ DG+VIK+N A Sbjct: 245 TWEMAYRIVRELGFRSNRDAKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKLNDRALY 304 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG V + PR A+A+K+PA++ T ++D+ +GRTGA TPVA LEPV +AG V AT Sbjct: 305 RALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGSTVQMAT 364 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN DE++R G+ IGD VV+++AGD+IP+V++ + R + P +CP C +D+ R Sbjct: 365 LHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPECETDLVR 424 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 EGEAV RC + C A+ S++HF S+ A+D+DGMG+K + L++ + ADL+ L Sbjct: 425 PEGEAVWRCPNPI-CPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAADLYVL 483 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 ++ LER SA +++A+ K A+FL+ALGIR VG TA + A+FG+L A Sbjct: 484 KKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHFGSLTA 543 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A+I++L +V VG VVA + +F + ++ ++ + GV P + P Sbjct: 544 IRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQALLDKFEKYGVQ---PQDVKQAPTKGP 600 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA-AGSKLAKAQELG 656 AG V+TGSL + R++A ++ LG +V K TD ++AG+ GSKLAKA++ G Sbjct: 601 LAGIHFVITGSLHSLDREEAADKIRALGGIFQTAVGKNTDYLVAGDNVGGSKLAKAEKFG 660 Query: 657 IEVIDEAEMLRLL 669 ++IDE ++ ++ Sbjct: 661 TKIIDEQKLRDMI 673 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 275/681 (40%), Positives = 399/681 (58%), Gaps = 18/681 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ LR + H Y Y+V+ PEI D +YD ++ +L LE + PEL T DSP+QR Sbjct: 4 KQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSPSQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 VG F + H PMLSL N + E F RV L + + + ELK DG+ Sbjct: 64 VGGGITKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEHRDSPEFVAELKFDGV 123 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR---------LEV 170 AVS+LY +G+LV ATRGDG+ G+DIT N+RTIR++PL+L + +EV Sbjct: 124 AVSLLYRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGREIEV 183 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGEVF+ + F +NE + FANPRNA AG+L+ D ++R + F Y + Sbjct: 184 RGEVFMTKTDFAVLNEGRPE--EERFANPRNATAGTLKLQDSGEVSRRKMVFVAYYLK-- 239 Query: 231 EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPT-LGFDIDGVVI 289 E +H RL ++ G +C + +++ + ++ R T L ++IDG+V+ Sbjct: 240 ESSAEIISHAERLELLERLGFYTGGEHRVCRTLKDIREYIDGWQKKRLTGLPYEIDGIVL 299 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 K+N+ A +++LG +++PRWA+A+KFPA+ T +R + FQVGR G ITPVA LEPV +A Sbjct: 300 KLNNTALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPVRLA 359 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G VS +TLHN +E+ERL +R+ D VVI ++G++IP+V++VV +R T VV P CP Sbjct: 360 GTTVSRSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVVEEKRRPGTLPVVVPESCP 419 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CG+ + + E C C AQ K ++HF SR AMD++G+G I++QLV V Sbjct: 420 SCGTPLVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLVSSGMVV 479 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 DL++LT + L+R KSA N+VNA+ K++ + R L+ALGIR VG ATA LA Sbjct: 480 DAGDLYRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGIRHVGIATARELA 539 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 + TL+ L AS+E L V DVG V+A VH FF + S +I +L GV A Sbjct: 540 GAYPTLDMLCKASVEALSDVTDVGPVIAESVHAFFRKPSATAMIEKLREAGVRLEAEKTK 599 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 ++ F G V+ TG+L + +RD+A + E G K SVSK T+LV+ G+ GSKL Sbjct: 600 KPVNLN--FDGMKVIFTGALERYTRDEAAGLVRERGGKTVASVSKNTNLVVYGKEPGSKL 657 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA++LG+ VI E+E +LG Sbjct: 658 EKARKLGVRVITESEFEEMLG 678 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 286/670 (42%), Positives = 406/670 (60%), Gaps = 14/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I++++ +LR+ + +H LY+ +D EI DAEYD L L+ LE +P+ SPTQ Sbjct: 1 MDKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 ++G A F+ + H M+SLDN + E L +++R L + E K+DG++ Sbjct: 61 KIGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLG-HGNFEMVAEAKIDGVS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 S+ YE GVL AATRGDG TGED+T+N++TI+ IP + ++E+RGE+++ +A Sbjct: 120 CSLTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNIS---FKNKIEIRGEIYIEKAD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 +++NE G +FAN RNAAAGS+RQ + I+A RPL FF + G + Sbjct: 177 LKRLNEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGYGDVD--VKGFA 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + K WG V+ E+ +FY + EE R L +D+DG+V+K+NS A+Q+ L Sbjct: 235 EFMDLCKSWGFSVTPNRIRTADINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A++PRWA+AFK+ + T V + F VGRTG ITPVA LEPV VAGV++SNATLHN Sbjct: 295 GVTAKSPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEI+RLG++ GD V++ RAG+VIP+++NVV EV P +CP CGS V R E Sbjct: 355 FDEIKRLGVKEGDTVIVERAGEVIPKILNVVKD---GGGNEVKAPKNCPSCGSKVYRYED 411 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C AQ K L HFVSR AMD+DG G+ +++Q+VEK+YV AD++ L A Sbjct: 412 EVAIRCINP-ACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAE 470 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L L+ K N++ A+E +K+ + +R LYA GIR VG+ T LA +F +E + A Sbjct: 471 QLLTLDLFKDKKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENMLA 530 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 AS+E+ QK+ ++G VV V++F + I+ L GV++ P V A + G Sbjct: 531 ASLEDFQKINEIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQPKVQLA---GNELLG 587 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+V TG L M R A+A G KV+GSVS KT V+AG AGSKL KAQ LG+ VI Sbjct: 588 KTLVFTGEL-NMPRTQAEALAKAHGGKVSGSVSSKTSYVVAGADAGSKLTKAQSLGVSVI 646 Query: 661 DEAEMLRLLG 670 E E L L+ Sbjct: 647 SEEEFLNLIK 656 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 282/673 (41%), Positives = 397/673 (58%), Gaps = 13/673 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++ ELR L + Y+V D P I D EYDRLM+EL LE K+PE+ SP+Q Sbjct: 3 MMDEKARILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSPSQ 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+ + L F ++ H+ MLSL NVF++E F +R+ + + + E K DGLA Sbjct: 63 RIIGSVLDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVS---NPEFVVECKYDGLA 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LY++G A TRGDG GED+++NV+TI +IP+ + +EVRGEV++P+A Sbjct: 120 MALLYDDGNFTRAVTRGDGIVGEDVSNNVKTILSIPMHIPEMR---HVEVRGEVYMPKAS 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N+ G FANPRNAAAGS+RQLD I A R L + Y + T Sbjct: 177 FEQLNKRQEEKGLAPFANPRNAAAGSIRQLDSSICASRKLDAYWYYFQNASDFAV-QTQE 235 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L K + +C + E++ F +++E R L ++IDG+VIK+N+LA Q +L Sbjct: 236 EALQAMSKMHFRTNPLRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRRL 295 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A+ PR+A A+KFPAQE +T ++D+ VGRTG ITP A LEPV VAG VS A LHN Sbjct: 296 GSTAKVPRYATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHN 355 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I LRIGD VV+R+AG++IP+VV V R FPT CP+CGS + R+ Sbjct: 356 EDMIVNKDLRIGDIVVVRKAGEIIPEVVTSVPERRDGTQVPYKFPTTCPICGSHLVRLPD 415 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 EA C C A+ ES+ HF SR AM++D +GDK I+QL E Y+++ D++ L Sbjct: 416 EAAHYCIN-QDCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIYFLDRY 474 Query: 480 -GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L KS ++ ++EK+K+ LY LGIR+VG+ A LA FG ++ L Sbjct: 475 YDELIEKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGIRQVGKKAAMILAEQFGDIDTL 534 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 A ++EL + D+G++ AS V FF EE N ++I L G ++ E F Sbjct: 535 MHACVDELVLIHDIGLITASSVVAFFKEEKNLHLIDVLKQAGCNFKQEKKQVVES---RF 591 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 KT VLTG+L +R++AKA L LGA V+GSVSKKTD VI G AAGSKL KAQ LG+ Sbjct: 592 TNKTCVLTGTLEHYTRNEAKAILESLGANVSGSVSKKTDYVIYGTAAGSKLTKAQSLGVM 651 Query: 659 VIDEAEMLRLLGS 671 + E E ++ + + Sbjct: 652 TMSEEEFVQEVEN 664 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 301/667 (45%), Positives = 397/667 (59%), Gaps = 8/667 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + EL L H Y Y+V+D+P + DAEYDRLMREL LE HPEL TPDSPTQ+V Sbjct: 60 RARAAELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKVAG 119 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 + F+ + H +LSLDNVFD++ F + R + + W CELK+DGLAV ++ Sbjct: 120 SYSTLFTPVEHLERLLSLDNVFDDDEFHLWAARAARETEVDG---WLCELKIDGLAVDLV 176 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G LV AATRGDG TGEDIT N+RT+ ++P +L G ++P LEVRGEVF P F ++ Sbjct: 177 YEEGRLVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPTEKFAEL 236 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N GGK FANPRNAAAGSLRQ DPR+TA RPL +G+G G + + Sbjct: 237 NASLVAGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGLGAQRGFDAA-SQSAAYA 295 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +F ++GLPVS + S +VLAF H+ R + +IDGVV+KV++ A Q +LG + Sbjct: 296 RFAEFGLPVSTHFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQRRLGSTS 355 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APRWAVAFK+P +E T +RD+ VGRTG +TP LEPV VAG V ATLHN DE+ Sbjct: 356 KAPRWAVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATLHNVDEV 415 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 R G+ IGD VV+R+AGDVIP++V V+ R R V PTHCP CG+++ R EGE Sbjct: 416 GRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRPEGEVDI 475 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC C AQ +E + H SR A+D+DG+G + L+E + V D+F LT G Sbjct: 476 RCPNTDACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHLTPESFEG 535 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L G K ++ +E A+ R L L IR VG A LA +L+A+ AA E Sbjct: 536 LRGFGQKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARALARELRSLDAIAAAPAE 595 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L V VG +AS V ++FA+ +R++++ + A G A E P G VV Sbjct: 596 QLAAVEGVGPKIASAVVDWFADARHRDIVARIAAGGASLADAG---AAEGPRPLDGVAVV 652 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEA 663 +TG+L SRD A + G KV GSVSKKT V+ G G +K KA+ LG+ V+DEA Sbjct: 653 ITGTLDGWSRDSATEAVQGRGGKVTGSVSKKTAFVVVGADPGAAKYDKARSLGVPVLDEA 712 Query: 664 EMLRLLG 670 LL Sbjct: 713 GFAVLLE 719 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 311/686 (45%), Positives = 413/686 (60%), Gaps = 26/686 (3%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 LR L +H + Y+V+D EI DAEYD L REL+++E + P L TPDSPT RVG +A Sbjct: 38 EALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVA 97 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 A H + M SLDN F E + F +R+ + + + C+ K+DGLA+ ++YENG Sbjct: 98 ALETQAHTLRMYSLDNAFSAEEWDGFIQRMLRA-EPDAPTAFWCDPKMDGLALEVIYENG 156 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-PARLEVRGEVFLPQAGFEKINED 187 V +A TRGDG GE +T+ +RT+R +PL+LHGE PARLEVRGEV + +A F+ +N Sbjct: 157 VFTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAA 216 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD---------- 237 R G K+FANPRNAAAGS+RQLD +TA RPL F YGVG + Sbjct: 217 RRGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGP 276 Query: 238 -----THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 TH + +G CE+ +V+A+Y + R L FDIDGVV K++ Sbjct: 277 EARWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDGVVAKLD 336 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L+ Q LG+ ARAPRWA+A KFPA + T + + QVGRTG +TPVA L PV V GV Sbjct: 337 DLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVT 396 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE-VVFPTHCPVC 411 VS ATLHN DEI LR+GD VV++RAGDVIP+VV ++ +RP FP CPVC Sbjct: 397 VSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECPVC 456 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + V R GEA RC + C A ++S+ HFVS+ +D+ G+G + ++ LV++ V +P Sbjct: 457 HTPVRREPGEAAWRCVN-VGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVTSP 515 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKE-TTFARFLYALGIREVGEATAAGLAA 530 ADLF L L ERMGPK A+N + A + A+ T R + ALGIR VGE TA LAA Sbjct: 516 ADLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTLAA 575 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 +F L+AL AA E LQ++PD+G VA+ + FFA E NR ++ L G+ P+ Sbjct: 576 HFADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGLWPVRPVRPE 635 Query: 591 AEEI------DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA 644 A+ P AG V+ TGSL+ ++R DA+ R V GA + GSVSKK DL++ G+ Sbjct: 636 ADAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVSKKLDLLVVGDK 695 Query: 645 AGSKLAKAQELGIEVIDEAEMLRLLG 670 GSKL KA +LGI V+ E E L LL Sbjct: 696 PGSKLDKATKLGIRVLREQEFLDLLE 721 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 278/671 (41%), Positives = 405/671 (60%), Gaps = 7/671 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+I+Q++ LR + H Y Y+ +D P I D E+D ++EL++LE + PE +SPT R Sbjct: 3 ENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTLR 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F ++H+ M SLDN +D + KR++ L E V + ELK DG ++ Sbjct: 63 VGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTLN--EPVEFVAELKYDGASI 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SILYENG L A TRGDG G++ITSNV+TI IP++LHG + P R +RGE++L F Sbjct: 121 SILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHG-DFPERFFMRGEIYLTHQNF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ G F NPRN A+GSL+ D KR L+ Y + TH Sbjct: 180 EKINKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLYQF--ISENTAAQTHWE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + K WG +SD+ LC +EV AF + +E+R TL FDIDG+V+KVN LAQQ LG Sbjct: 238 LLQKAKSWGFRISDQAKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDLAQQRVLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + A++PRWA+A+K+ A++ T ++ V +QVGRTGAITPVA L+PV +AG +V A+LHN Sbjct: 298 YTAKSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVKRASLHNE 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I +LGL D V + + G++IP++V V L++R E+ + +CP C + + RVE + Sbjct: 358 DIIRKLGLYEHDFVYVEKGGEIIPKIVGVNLAKRNPANAEIQYIKNCPECSTALIRVEDQ 417 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C L C Q + H+VSR+A++++ +G + I+QL ++ V PAD + LT + Sbjct: 418 AIHFCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQ 477 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LERM KSAQN++ +EK+KE F + L+ +GI+ VGE A L F +++ L+ A Sbjct: 478 LLPLERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKNFNSIDDLKNA 537 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + EL +V D+G+ +A + FF N +I L + GV E + + GK Sbjct: 538 TAAELVQVEDIGLKIAESITEFFKNPENVLMIERLKSYGVKL-EKGADTHEVLSNALDGK 596 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVI 660 T + TG LS +RDDA+ + + G K +VSK D ++ GE AGSKL KAQE+G I ++ Sbjct: 597 TFLFTGKLSLFTRDDAEEMVEKHGGKNISAVSKNLDFLVVGEKAGSKLKKAQEIGTITIL 656 Query: 661 DEAEMLRLLGS 671 DE + L LL + Sbjct: 657 DEQQFLDLLQA 667 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 300/658 (45%), Positives = 398/658 (60%), Gaps = 9/658 (1%) Query: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIR 74 LRHH Y Y+V+DAP + DAEYDRL ++L+ LE ++P L TPDSPT +VG + Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVT 91 Query: 75 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 134 H PMLSL V++E+ F + ++ L E VT+ E K DGLAV ++YE+G LV A Sbjct: 92 HPAPMLSLKAVYEEDEVRNFAETCREELGR-ETVTYIAEPKFDGLAVELIYEDGRLVQGA 150 Query: 135 TRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEVFLPQAGFEKINEDARRTG 192 TRGDG TGE+IT+NV+TI+ +PL+L + +P RL VRGE ++ + F N G Sbjct: 151 TRGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRREEEG 210 Query: 193 GKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLP 252 KVFANPRNAAAGSLRQLD ITA+RPL + Y + ++G + TH L +WGL Sbjct: 211 KKVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDGRDFA-THAEVLEALPEWGLR 269 Query: 253 VS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAV 311 V D + C+ + LA + + + R L ++IDG+VIKVN E LG R PRWA Sbjct: 270 VCEDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPRWAA 329 Query: 312 AFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 A+KFP + T + D+ QVGRTG ITPVA L PV V GV V+ A+LHN +EI+R +RI Sbjct: 330 AYKFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRI 389 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 GD V+I RAGDVIPQVV V+ ER P CPVCGS+V + + A CTGG+ Sbjct: 390 GDTVLIERAGDVIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTGGMT 449 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 C AQ +E LKH+ SR A D++G+GDK +QL++ + T +DL++L L LER K Sbjct: 450 CPAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERYADK 509 Query: 492 SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD 551 SAQN+++ +E + E RFLYALGI VG ATA LA +F TL+AL A + L + D Sbjct: 510 SAQNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHFDTLDALVDADEDALTTIDD 569 Query: 552 VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 +G VA + FFA+++NR VI E+ G+ P +A G T V TGSL Sbjct: 570 IGPEVAHSIATFFADDANRGVIDEMRDAGLTLTNPYAEDAA----RLEGLTFVFTGSLEG 625 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 +R + + + GA SVS TD V+AG AGSK A + GI V+DE LL Sbjct: 626 WTRSAVQRFVEQHGANATSSVSGNTDYVVAGPGAGSKRDDADDRGIPVLDEDAFHALL 683 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 298/701 (42%), Positives = 419/701 (59%), Gaps = 42/701 (5%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ELR L +H Y Y+++DAPEI DA +D+++ EL+E+E +P+L+TPDS TQRVG Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVGGYVSEQ 98 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 F+ + H M S+D+ D + A+ +R +D L VT+ CELK+DGL V++ Y+NG Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGA-GNVTYTCELKIDGLGVALTYQNGT 157 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLH-------GENIPARLEVRGEVFLPQAGFE 182 V AATRGDGTTGED++ NVRTI+ +P+ L G + +EVRGEV++P+ F Sbjct: 158 FVRAATRGDGTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFV 217 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+A G FANPRNAAAGSLRQ DP++TA+R L F Y + + + + Sbjct: 218 RLNEEADAEGRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIADTDPLHV-HSQREF 276 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + G V+ V C + EV F + E R L +DIDGVV+KV+S QQ LGF Sbjct: 277 LDWLRSAGFSVNPNVARCATPAEVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQLDLGF 336 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ARAPRWA+AFKFP +E+ T +R++ QVGRTG +TPVA +PV VAG ++ ATLHN D Sbjct: 337 TARAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATLHNID 396 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 EI R +R GD +++ +AGDVIP+VV VL +RP D+ + P CPVCGS V +GE Sbjct: 397 EIRRKNVREGDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHEDGEV 456 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC + C AQ KE L H+VSR MDVDG+GD+I+D+++ +H AD ++LT + Sbjct: 457 AYRCV-SIDCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLTVDDI 515 Query: 483 TGLER--------------------MGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 GL+ +G K+A+ ++ L K+K R L+ALGIR VG+ Sbjct: 516 AGLDTGRTYASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIRHVGK 575 Query: 523 ATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 + +A F +++ L AS E++ + +G +A+ V F A N V+ L G+ Sbjct: 576 SVGEVIAERFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAVLERLRQAGLS 635 Query: 583 WP------------APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 V P AG T VLTG+L +RD+A A L LGAKV+G Sbjct: 636 LEVDLGAAHAQAAADAGVAGELADAQPLAGLTFVLTGTLVNRTRDEAGAALKVLGAKVSG 695 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 SVSKKT ++AG AGSKL KA++LG+ V+DE + ++L + Sbjct: 696 SVSKKTSYLVAGPKAGSKLTKAEQLGVPVLDEDALEQILAT 736 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 322/778 (41%), Positives = 435/778 (55%), Gaps = 110/778 (14%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +Q++ L L + + Y+ +DAP +PD+EYDRL REL LET++P+ P+SPT R Sbjct: 21 QQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTNR 80 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDE----------ESFLAFNKRVQDRLKNNEKVTWC 111 VG A L F + H VPMLSL N F AF++RV L + Sbjct: 81 VGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAFDERVCKDLGAAHT-EYI 139 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY+NG+L+ AATRGDGTTGED+T N++T+R IPL+LHG+ +P +EVR Sbjct: 140 IEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDLIEVR 199 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQL+ ITA+R L FF YG+ L Sbjct: 200 GEVLMLKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGYGIARLS 259 Query: 232 G-GELPDTHLGRLLQFKKWGLPVSD-RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 P+ H + + G ++ +C + +EVL FY + + RP L ++IDG+V+ Sbjct: 260 TAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYEIDGMVV 319 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN L QQ+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTG+ITPVARL+PV V Sbjct: 320 KVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARLKPVFVG 379 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP------------E 397 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV VVL RP Sbjct: 380 GVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLLGERQEP 439 Query: 398 DTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK 457 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GDK Sbjct: 440 QHPAFRLPETCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMDIVGLGDK 499 Query: 458 IIDQLVEKEYVHTPADLFKLTAGKLTGLERM---GPKSAQNVVNALEKAKETTFARFLYA 514 I+ LVE++ +H+ AD+++L KL ++ K N+++A+ +++ ARFL+A Sbjct: 500 QIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPPLARFLFA 559 Query: 515 LGIREVGEATAAGLAA-------------------------------------------- 530 LGIR VGE+TA LAA Sbjct: 560 LGIRHVGESTAKQLAAAFGDWDTVRRAPEPVLACLPDIGSVVAHSIAHFFRLPEQQKLLD 619 Query: 531 ---YFGTLEALEAAS--------IEELQKVPD--VGIVVASHVHNFFAEESNRNVISELL 577 +F + + A+ L ++PD + A + + + + + L Sbjct: 620 DLLHFVSPQEAAIATLVLEYATPARWLARLPDYKISEKRAQELWDLAGGSIAQLLADDAL 679 Query: 578 AEGVHWPAPIVINAE-------------------------EIDSPFAGKTVVLTGSLSQM 612 NA + + GK VLTG+L + Sbjct: 680 PSDWQAWRRQPENARLLRDIDAFFAQLPEHALPADNAVSGSLKNEITGKIFVLTGTLPTL 739 Query: 613 SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 RD A A + G KV+GSVSKKTD V+AG AGSKL KAQ LGI V+ E E+L +LG Sbjct: 740 KRDQAAALIEAAGGKVSGSVSKKTDFVVAGAEAGSKLEKAQSLGITVLSEEELLGMLG 797 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 267/673 (39%), Positives = 394/673 (58%), Gaps = 13/673 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + ++ +L L Y+ D P + D YD L LE +P L PDSPTQ Sbjct: 15 FTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYPSLAMPDSPTQ 74 Query: 61 RVGAAP-----LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELK 115 V A ++ H VPMLSL +VF + L ++ + +K + ELK Sbjct: 75 HVAAGNQTKNDSRGLQKVVHPVPMLSLGDVFSIQELLDWDLVTTKNAGSQQK--YNLELK 132 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DGLA+S+ YENG L+ A+TRGDG+ GE++T NV+TI IP L N P +EVRGE++ Sbjct: 133 IDGLAISLRYENGRLIQASTRGDGSIGENVTDNVKTITEIPKVL---NEPLTIEVRGEIY 189 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +N+ G +FANPRNAAAGSLRQLDP+ITAKR L+ F Y + Sbjct: 190 MRKEAFADLNQQRDEEGKTIFANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQNDVL-G 248 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 +T L +F++ G PV+ + + EV + + R L + IDGVV+KVN L Sbjct: 249 VNTQSDVLERFRQLGFPVNSSNKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKVNDLD 308 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 + +LG + PRW++A+KFP +E +T VRD+ + VGRTG +TP A ++PV +AG V Sbjct: 309 VENELGNTVKIPRWSIAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAGTKVKR 368 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 A+LHN D ++ +RIGD V + +AGD+IP+V V+L +RP D + P +CP C S + Sbjct: 369 ASLHNPDYLQEKDVRIGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPSCKSKL 428 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 V+GE RC C AQ KE L HF SR AM++DG+G ++++QL+ K + +DL+ Sbjct: 429 VHVQGEVALRCINPE-CPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIRKISDLY 487 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 LT +LT L++ S++N++ A++++++ + R + ALGIR VG A LAA+F L Sbjct: 488 ALTESQLTTLDKFADLSSKNLIQAIDRSRQNSVERLITALGIRGVGAKAAKVLAAHFKNL 547 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 L+ A EE+ ++ VG V+A + +F ES ++I+EL V++ +E + Sbjct: 548 RNLQNAGAEEIAEIDGVGQVMADAIRQYFNSESVASLINELENFQVNFDYLTTSTVDEKN 607 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 F K +VLTG L +R +A L E GA V+ SVS KTDL+IAG GSKL +A +L Sbjct: 608 Y-FFNKRIVLTGKLIHWTRPQMQAWLEEHGANVSSSVSSKTDLLIAGSDVGSKLERANKL 666 Query: 656 GIEVIDEAEMLRL 668 GI+VI+E + + L Sbjct: 667 GIKVINEQDFINL 679 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 783 bits (2022), Expect = 0.0, Method: Composition-based stats. Identities = 277/668 (41%), Positives = 388/668 (58%), Gaps = 14/668 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ES ++ LR+ ++ Y+V D P + D E+D L+ ELR LE HPEL +PDSPT+R Sbjct: 3 ESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTER 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VGA P ++F+ +RH PMLSLDNVFD + A+ +R + L ++ + + ELK+DGLA+ Sbjct: 63 VGAPPGSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFF--ELKIDGLAL 120 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y +G L AATRGDG GED+T+N + AIP +L G P +EVRGE+FLP++ F Sbjct: 121 SLTYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGPGLVEVRGELFLPRSAF 180 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +NE + FANPRNAAAGSLRQ DP +T R L+FF Y + E G D H Sbjct: 181 RALNERV----ERPFANPRNAAAGSLRQKDPALTRDRGLSFFAYQL---EEGPSFDYHHE 233 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G V T +E+ + E R L +DIDG VIKV+ L + +LG Sbjct: 234 ALQWLGEVGFQVEAHATPV-GLDELADKLAWLAEARDGLDYDIDGAVIKVDRLEDRVRLG 292 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 APRW +A+KFPA+E+ T + +E VG++G +TP A L+PV V G VS ATLHNA Sbjct: 293 TTTHAPRWMIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNA 352 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D+I RL +R+GD V++RRAG+VIP+VV VL RP+D VFPT CPVC + + R GE Sbjct: 353 DQIARLDVRVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGE 412 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 RC C Q + L HF SR AMD+DG+G++ QLVE V P DL++LT Sbjct: 413 VDWRCPN-RRCPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDD 471 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L L + +S + + +E ++ R ++AL I VG+ +A G+L L Sbjct: 472 LARLPGVRHRSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTV 531 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + +EL +V +G VVA+ V F + R ++ +L GV P G Sbjct: 532 TEDELCRVEGIGPVVAASVVAFRDSDLGREILDKLERAGV---GASADRPRAAGGPLEGL 588 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 + VLTG++ + R + A + E G +V SVS++T V+AG + GSKL +A+ GI VID Sbjct: 589 SFVLTGTVPGIGRAELAALIEEHGGQVRTSVSQRTSYVVAGASPGSKLDEARARGIPVID 648 Query: 662 EAEMLRLL 669 + L+ Sbjct: 649 LDGLRELI 656 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 272/674 (40%), Positives = 407/674 (60%), Gaps = 17/674 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ ++ LR + HH LY+ + PEI D EYD L++EL+ELE ++ E +SPTQ+ Sbjct: 4 NELKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESPTQK 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG+ I H+V M SL+N + E LAF R + L +C ELK+DG ++ Sbjct: 64 VGSDLTPGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYAS--EYCAELKIDGFSI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YENG + A TRGDG GED+T N R + +P + + +E+RGE+++P F Sbjct: 122 NLYYENGNFIYATTRGDGLEGEDVTENFRLLPDVPFTI---DYKGAIEIRGEIYIPVQDF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-----ELP 236 +NE R K FANPRNAAAGS++ R L Y +G E E+ Sbjct: 179 LALNEFRRENELKTFANPRNAAAGSIKLKSREEVKSRHLKALFYALGYYETPLQYKNEII 238 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 D L + G P S R LC+ +E F ++E++R T+ +DIDG+VIKVNSL Sbjct: 239 DKQTRLLDFLDELGFPTSKRT-LCKHYQEAEKFCLQMEQERYTIPYDIDGIVIKVNSLED 297 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q++LG+ A++P+WA+A+KF +E+ T + V FQVGRTGA+TPVA L+PV ++G VS+A Sbjct: 298 QKKLGWTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHA 357 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHNADEI+RL L GD V++ ++G++IP++++V +S+RP + + V+FP CPVC + ++ Sbjct: 358 TLHNADEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQ 417 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R E ++ C C AQ + L+HF SR AMD+ G+G +I +L+E + D++ Sbjct: 418 RDEDGSINYCPNA-NCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYH 476 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 L K+ +ERMG KSA N+ A+E +K F R L+ALGIR +G TA LA +F ++ Sbjct: 477 LDYNKIAEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTLAQHFKNID 536 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 AL A EEL VPD+G ++A + FF+++SNR +I L G+ + ++ Sbjct: 537 ALIMAKEEELLSVPDIGSIIARSIIGFFSQKSNRELIDSLRKVGLQFTYISPQSSA---- 592 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG 656 AGKT ++TG+L SR D + + E G K+ VSK+ + +I GE GSKL KA +LG Sbjct: 593 ILAGKTFLITGTLPNYSRKDMETLITEHGGKILSGVSKQLNYLIVGENPGSKLDKAHQLG 652 Query: 657 -IEVIDEAEMLRLL 669 +++I EAE+L +L Sbjct: 653 TVKIISEAELLDML 666 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 294/677 (43%), Positives = 399/677 (58%), Gaps = 17/677 (2%) Query: 1 MESIE-----QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITP 55 M+ + LR + H Y+ DAPEI D EYD L R LR++E +HPE + Sbjct: 1 MDQAASPDDHARYLALRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVED 60 Query: 56 DSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK---NNEKVTWCC 112 DSP Q +G AP AAF + H PM SLDNVFD + + +++ L ++ T+ Sbjct: 61 DSPVQTIGGAPSAAFEPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTG 120 Query: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 E+K+DGL+V++ Y +G L AATRG+G GE +T+ V TI IP L G + +LEVRG Sbjct: 121 EIKIDGLSVNLYYLDGTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDG--LKGQLEVRG 178 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 EV+L +A F N A G + NPRN AAG+LRQ DP +T R L Y +G +G Sbjct: 179 EVYLSRADFAAFNAQAEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFYSLGRRDG 238 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 E T L G PVS ++ ++ E R FD DG VIK++ Sbjct: 239 VE-ARTQSEVLQWLAGRGFPVSHYSETFRGYVAAADYHRRMTEARSNFEFDADGTVIKLD 297 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 LA QE+ GF +RAPRWA+AFKFP ++ T + + VGRTG + P+A L P + G Sbjct: 298 PLALQEEAGFTSRAPRWAIAFKFPVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGST 357 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS ATLHN D I ++ LR+GD VV+R++G VIPQ++ VV +RPE T VFPT+CP CG Sbjct: 358 VSKATLHNEDYIRQMDLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECG 417 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 +V R EG+A C C AQR E +++FVSR AMDV G+G+K++ Q++E V A Sbjct: 418 HEVTRAEGDANTYCPNP-ACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAA 476 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL+ LTA +L GLER G K AQNV+ LE +K R + ALG+ VGE A LA F Sbjct: 477 DLYLLTAEQLAGLERGGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAF 536 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 G+L+AL A+ E+++ VP +G V A V A+ + RN+I L A G+ + E Sbjct: 537 GSLDALLRATPEQIEAVPGMGKVTAVSVSAALADPTMRNLIERLRAAGMSPEETQTVRGE 596 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 ++ AG V+TGSLSQ RD+ KA L GA+V GSV++KT +IAG+ AGSKL +A Sbjct: 597 QL----AGLNFVITGSLSQ-PRDELKALLEAAGARVTGSVTRKTSYLIAGQDAGSKLDRA 651 Query: 653 QELGIEVIDEAEMLRLL 669 +EL + V+DEA + LL Sbjct: 652 RELAVPVLDEAALGTLL 668 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 285/674 (42%), Positives = 420/674 (62%), Gaps = 10/674 (1%) Query: 1 MESI---EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ME I ++ ELR LR HEY Y+V+ +P I D EYD +M++L ELE ++PE +PDS Sbjct: 1 MEKIVPPAVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDS 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PT RVG+ F+ +RH+ PMLSL N ++ + F +RV + L+ ELK D Sbjct: 61 PTHRVGSDKTEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQG-APFEIVAELKFD 119 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL++S++YE+G+LV A TRGDG G+D+T+NVRTIR++PL+L G++ P LEVRGE+ LP Sbjct: 120 GLSISLIYEDGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLP 179 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 F++IN G +FANPRNAA+G+++QLDP I A R L + Y + E L + Sbjct: 180 FKEFDRINAQREAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEP--LAE 237 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H RL+Q ++WG VSD VTLC S E+V AF + + +R TL DG+V+KVN+ AQQ Sbjct: 238 NHYDRLMQARQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQ 297 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LGF A++PRWA+A+K+ A+ T ++ V +QVGRTGA+TPVA L+PV ++G +V A+ Sbjct: 298 DLLGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRAS 357 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNAD I L GD V + + G++IP++V V R D R +VF CP C + + R Sbjct: 358 LHNADFIAEKDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVR 417 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 +GEA C C Q+K L+H+ R+A D+ +G + I+ L + + AD + L Sbjct: 418 EQGEAAYYCPNAEGCPQQQKGRLEHYCGRKAADI-NIGPETIELLYSRNMIRNVADFYAL 476 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T +L L ++A +++++E +K + L+ LGIR VGE A LAA + +++A Sbjct: 477 TEEQLLTLPGFKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDA 536 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L AA+ EEL ++ ++G +A+ V +FF+ NR +I L GV A V Sbjct: 537 LAAATSEELVQIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEAETVSVPVSA--R 594 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELG 656 AGKTVV++G+ + SRD+ KA + + G ++AGSVS KT ++AG G SK KA++LG Sbjct: 595 LAGKTVVISGTFEKYSRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGPSKREKAEKLG 654 Query: 657 IEVIDEAEMLRLLG 670 + ++ E E LRL+ Sbjct: 655 VRLMSEEEFLRLIE 668 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 339/817 (41%), Positives = 449/817 (54%), Gaps = 151/817 (18%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 Q + L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQRVG Sbjct: 26 AAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEE---------SFLAFNKRVQDRLKNNEKVTWCCEL 114 PLA F+++RHEVPMLSL N F + AF++RV+D L + E Sbjct: 86 GEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDG-GNPEYVIEP 144 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K DGLA+S+LY +GVLV AATRGDGTTGED+T N++T+ IPL+LHGEN P +EVRGEV Sbjct: 145 KFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEV 204 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 + +A F +N+ G K FANPRNAAAGSLRQLD RITA+R L FF Y V + G Sbjct: 205 LMLKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGF 264 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + + H+ L F+ G + + C ++ +EVLAFY +++ RP L ++IDG+V+KVNS Sbjct: 265 VAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNS 324 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 LAQQ +LGF++RAPRWAVA KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V GV V Sbjct: 325 LAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTV 384 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT-------------- 399 +NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP Sbjct: 385 TNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQD 444 Query: 400 ------------------REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLK 441 + PTHCP+C S++ER EGEAVARC+GG++C AQR + L Sbjct: 445 DLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLI 504 Query: 442 HFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK---------- 491 HF SR+AMD+DG+G+K I+QLV ++ V ADL++L L ++ K Sbjct: 505 HFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPS 564 Query: 492 -----------------SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 A+N++ +E +K ARFL+ALGIR VGE TA LA FGT Sbjct: 565 EGSSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAFGT 624 Query: 535 --------------------------------------LEALEAASIE------------ 544 ++ L AA + Sbjct: 625 LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPPAR 684 Query: 545 ------ELQKVPD--VGIVVASHVHNFFAEESNRNVISELLAEGVHWP------------ 584 + ++P + A + + + L Sbjct: 685 HAEPQRWIARLPGFKISENKAQALWELAGKNIEGLQTDKALPTDWQAWRSEPQNAALLEN 744 Query: 585 -----------APIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 ++ I+ AGKT VLTG+L + RD A++ + G KV+GSVS Sbjct: 745 LKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVSGSVS 804 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KKTD V+AGEAAGSKL KA LG+ V+ EAE+L LLG Sbjct: 805 KKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG 841 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 325/668 (48%), Positives = 429/668 (64%), Gaps = 11/668 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ LR+ LR H Y Y+++DAP I DAEYDRL+REL LE + E + DSPT+ VGA Sbjct: 9 ARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTRTVGAP 68 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P F+ H +LSL N F AF +R+ + L +++ E K+DGLAV++ Y Sbjct: 69 PSQVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPAT-TLSFIVEPKVDGLAVNLRY 127 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQAGFE 182 E G L AATRGDGTTGED+T NVRTI IP +L + +P LEVRGE+++ + F Sbjct: 128 EQGSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSREAFA 187 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +N G + FANPRNAAAGSLRQLD R+TA R L FF YG G L G + + Sbjct: 188 ALNARQDAEGAQPFANPRNAAAGSLRQLDARVTASRRLGFFAYGAG-LGGRAIASSQSQL 246 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + +G V + E +LA Y ++++ RP + ++IDGVV K++ A Q+++G Sbjct: 247 LERLAGFGFAVQK-TACADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQDRMGA 305 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 VAR+PRWA+A KFPA+E T V+D+ +QVGRTG ITPVA +EPV V GV+VS ATLHN D Sbjct: 306 VARSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATLHNID 365 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E++R + G +V++RRAGDVIP+VV V P CPVCG+ + R+EGE Sbjct: 366 ELKRKQVYAGARVIVRRAGDVIPEVVRAVDV--DAQAMMPKAPAQCPVCGASLFRLEGEV 423 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC+GGL C AQ E L+HFVSR AMD++GMGDK+I +LV++ ++ ADL++ L Sbjct: 424 AIRCSGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYEFDYASL 483 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + MG K N+ ++E++K+ ARFL+ALGIR VG ATAA LA +F LE L A Sbjct: 484 HEWQGMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAALATHFADLELLMQAD 543 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E L VPDVG VA + +FF E+ NR+VI LLA GV P ++ D P AGKT Sbjct: 544 EEALLAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGV---TPEAPQQQQHDHPLAGKT 600 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VVLTGS + R A+ +L LG + +GSVSK+TDLVIAGE AGSKL KA+ELGIEV DE Sbjct: 601 VVLTGSFVAIKRRTAQEQLRALGVRPSGSVSKQTDLVIAGEKAGSKLTKARELGIEVADE 660 Query: 663 AEMLRLLG 670 A++L L Sbjct: 661 AQLLSWLN 668 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 277/676 (40%), Positives = 392/676 (57%), Gaps = 17/676 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ ELR + H+ LYH P+I D EYD L REL ELE P+ SPT++V Sbjct: 5 EAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPTEQV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F RH M+SLDN + E F+ R+ L+ + + + E K+DGLAVS Sbjct: 65 GDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELER-DGLKFVIEPKIDGLAVS 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQA 179 I YE G LV A TRG+G G+DIT+N TI+++P +L + +PA +E+RGEVFL Sbjct: 124 ITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTE 183 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE-LPDT 238 F +IN G ++ANPRN AAG+++QLDPR A+R L YG G +E LP+T Sbjct: 184 EFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPET 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 K WGLP +R A+E+ A +++ R T + DG V+K++++ Q Sbjct: 244 QAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQR 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + G +++PRWA+A+KF T +R + QVGRTG +TPVA L+PV +AG VS ATL Sbjct: 304 RAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN DEI R +R+GD V + +AG++IP V+ V + R + VFP CP CG+ V ++ Sbjct: 364 HNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTAVVQL 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EGE RC C Q + ++HF S+ +D++GMG+ ++D LVEK +VH+ D+++L Sbjct: 424 EGEVAVRCPN-FSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDIYQLK 482 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L L + KS ++ A+E +K RF++ LGI G A A LA FG LE L Sbjct: 483 RENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGGLERL 542 Query: 539 EAASIEELQK-----VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +A E+ + + +G +A + +FAE NR V+ EL+ GV P Sbjct: 543 ASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQPVVP------N 596 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 S AGKT VLTG+L ++RD+A A++ G KV+ VSKKT V+AGE AGSKL KA+ Sbjct: 597 SGSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKAR 656 Query: 654 ELGIEVIDEAEMLRLL 669 L + VIDEAE LRLL Sbjct: 657 ALAVPVIDEAEFLRLL 672 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 280/678 (41%), Positives = 380/678 (56%), Gaps = 16/678 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L +R H++ Y+V+DAP I D E+D L+REL+ LE HP L TPDSPTQ+V Sbjct: 45 DARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQQV 104 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ + H MLSLDN FDE+ A+ +RV + + + CELK+DGLA++ Sbjct: 105 GGTFSTEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVG--DAARYLCELKVDGLAIN 162 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQA 179 + YE G LV A TRGDG TGED+T N+RT+R +P L G + +P +EVRGEV+ Sbjct: 163 LRYERGRLVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVE 222 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G FANPRN AAGSLRQ DP++TA R L C+G+G G EL + Sbjct: 223 DFLELNAKLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFEL-ERQ 281 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + WGLP S+ + + +EV A E R +IDG+V+KV+ + Q + Sbjct: 282 SDAYAALRAWGLPTSEHTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRR 341 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +RAPRWA+AFK+P +E T + D+ QVGRTG +TP A +EPV VAG V+ ATLH Sbjct: 342 LGSTSRAPRWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLH 401 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE-RV 418 NA E++R G+ IGD++VIR+AGDVIP+V+ V+ RP D RE V P CP CG + Sbjct: 402 NASEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMK 461 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EG+ RC C AQ +E L + SR A+DV+ +G + L E ADLF LT Sbjct: 462 EGDVDIRCPNAEGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDLT 521 Query: 479 AGKLTGLERMGP------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 A L ++ + ++ LE AK R L AL IR VG A LA F Sbjct: 522 AEDLLRVDLFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVEF 581 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 G ++A+ A +L VG +A+ V + + V+ A GV Sbjct: 582 GGVQAILDAEEADLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVRMVDE---RDT 638 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 I G ++V+TG+L+ SRD+AK ++ G K GSVSKKT VI G+ GSK KA Sbjct: 639 TIRRDLEGLSIVVTGTLADFSRDEAKDSILVRGGKAVGSVSKKTAFVIVGDNPGSKADKA 698 Query: 653 QELGIEVIDEAEMLRLLG 670 +L + V+DEA LL Sbjct: 699 AQLKVPVLDEAGFRVLLE 716 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 277/670 (41%), Positives = 397/670 (59%), Gaps = 15/670 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I+ ++ ELR + YLYH D P I D YD LMREL ELETK+PE SPT+++ Sbjct: 2 DIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKI 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G L AF + H VPM+SL N+F++E F R+Q + ++ ELK+DGLAV+ Sbjct: 62 GGVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVI---PNTSFTTELKIDGLAVT 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ++YE G+ AATRG+G GEDIT NV+TI+ +PL+L P +EVRGE+++ F+ Sbjct: 119 LIYEKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSK---PLDIEVRGEIYMSHKTFK 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++N + + +F NPRNAAAG++RQLD ++ AKR L F Y V T Sbjct: 176 EVNLERANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTVVGAS--NFNSTQKET 233 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + G PV+ L ++ + + + R TL +D DGVVIKVN E +G+ Sbjct: 234 LEFLSELGFPVNPHYKLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGY 293 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A+ P++A A+KF A++Q+T V D+ FQVGRTG ITPVA L PV ++G LVS ATLHN D Sbjct: 294 TAKYPKYAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNED 353 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I +RI D+V++ +AG++IP+V+ VVL R HCP C S++ R +GEA Sbjct: 354 YILNKDIRIDDQVLVHKAGEIIPEVIEVVLGSRTNQA-PFEMVKHCPACESNLVRKQGEA 412 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AG 480 C C + L HF SR AMD+D +G+K+++ L ++ Y+ T D++KL Sbjct: 413 DYYCAND-NCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKD 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L L G K + ++NA+E +K T R ++ LGI+ VG A L ++ ++ L Sbjct: 472 QLEELPGFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLAD 531 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A E+L ++PD+G +A V +F+ ESN++++ EL G+ I PF G Sbjct: 532 AKYEDLIQIPDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMTYKI---DVVTTHPFNG 588 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT V+TG+L SR +A + +LG KV+GSVSKKTD V+AG+ AGSKL KA ELGIEV+ Sbjct: 589 KTFVVTGTLDDFSRTEASDIIEKLGGKVSGSVSKKTDYVLAGKEAGSKLTKALELGIEVM 648 Query: 661 DEAEMLRLLG 670 DEA + Sbjct: 649 DEATFKVKIN 658 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 279/684 (40%), Positives = 405/684 (59%), Gaps = 18/684 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI--TPDSP 58 I+++ +LR + +H LY+ D P I D EYD LMREL++LE ++PEL+ + +SP Sbjct: 23 FSKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSP 82 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--------KNNEKVTW 110 T+++G FS++RH PMLSL N ++ F+KRV+ + N+E + + Sbjct: 83 TKKIGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNNDENLEY 142 Query: 111 CCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV 170 ELKLDGL++S++YENG LV A TRGDG GED+T N+R I +IP KL P LEV Sbjct: 143 ILELKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKD---PVSLEV 199 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGE+ LP + F +IN++ G VFANPRNAA+G++RQLD I A R L + Y + Sbjct: 200 RGEIILPISNFNRINQEREDDGEDVFANPRNAASGTIRQLDKTIVADRGLDCYLYYLVNA 259 Query: 231 EGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 E +THL + K G + E+ K + R TL ++ DG+VIK Sbjct: 260 ENY-GINTHLESIEYIKNLGFQTTGVFEKYTDFTELEKSIDKWHDKRKTLDYETDGLVIK 318 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VN+ A E LG+ ++PRWA+A+KFPA++ T + DV FQVGRTG ITPVA LE V+++G Sbjct: 319 VNNFALYETLGYTTKSPRWAIAYKFPAEQVKTKLTDVTFQVGRTGVITPVAELEAVNLSG 378 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPV 410 +V A+LHN DEI R ++IGD V++ +A ++IPQVVNVV +R E+ PT+CPV Sbjct: 379 SVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPTNCPV 438 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 C S++ EG +C L C + K + +FVSR AM++ G+GDKI+++ +E + T Sbjct: 439 CNSELSHEEGLVALKCHNPL-CPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIELGKIKT 497 Query: 471 PADLFKLTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D++ L +L LE+MG KS N++N++E +K F++ LYALGI VG+ A L Sbjct: 498 IVDIYSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPFVGKFNANLL 557 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 F +E L+ SIE L V +G VA V+ F +E+N +I++L G+ + Sbjct: 558 TKTFKNIENLKNQSIENLLAVKGIGDKVAVAVNTFLNDENNWKIITDLQNIGLQFAIDET 617 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 + D+P K + TG L + R+D K ++ G VSK D +IAGE AGSK Sbjct: 618 NLEKIADNPIKDKNFLATGKLQKYKRNDIKDIILSKGGNYLSVVSKNLDFLIAGEKAGSK 677 Query: 649 LAKAQELGIEVIDEAEM-LRLLGS 671 L KA++LGI V+ E + L + Sbjct: 678 LEKAEKLGIRVLTEEDFEKEFLEN 701 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 346/812 (42%), Positives = 446/812 (54%), Gaps = 154/812 (18%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q++ L L + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQ Sbjct: 38 MNPTAQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQ 97 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEE---------SFLAFNKRVQDRLKNNEKVTWC 111 RVG PLA F ++RHEVPMLSL N F + AF++RV L EK + Sbjct: 98 RVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGLNG-EKPEYV 156 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 E K DGLA+S+LY +GVL AATRGDGTTGED+T NV+T+ IPL+LHGENIP +E+R Sbjct: 157 IEPKFDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIR 216 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV + +A F +N G K FANPRNAAAGSLRQLD RITA+R L FF Y + + Sbjct: 217 GEVLMLKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQ 276 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 GG + + HL L K+ G + D C + +EVLAFY ++++ RPTL ++IDG+V+K Sbjct: 277 GGFIAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVK 336 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 VNSLAQQE+LGF++RAPRWA+A KFPA+E +T V ++ Q+GRTGA+TPVARL+PV V G Sbjct: 337 VNSLAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGG 396 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT----------- 399 V V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+ RP Sbjct: 397 VTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQD 456 Query: 400 ----------------REVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHF 443 + PTHCP+C S++ER EGEAVARC+GG++C AQR + L HF Sbjct: 457 DLFAETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHF 516 Query: 444 VSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK------------ 491 SR+AMD+DG+G K I+QLV ++ V ADL++L L ++ K Sbjct: 517 ASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASANEEEPSNSE 576 Query: 492 -----------------------SAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 A+N++ +E +K ARFL+ALGIR VGE TA L Sbjct: 577 IEDFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKTL 636 Query: 529 AAYFGTLEAL------------------------------EAASIEELQKV--------- 549 A FGTLE + + A I+EL V Sbjct: 637 AQAFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGVAPQSQAV 696 Query: 550 -----------------PD--VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 PD + A + + + L N Sbjct: 697 TIPPLRHAEPQRWIARLPDFKISETKALALWELAGQSIEGLQTDKALPADWQTWRNKPQN 756 Query: 591 A-----------------------EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAK 627 A + I+ AGKT VLTG+L + RD A+A + G K Sbjct: 757 ATLLENMKTFFAQTRSNLQDETISDGINEAVAGKTFVLTGTLPTLKRDQAQAMIEAAGGK 816 Query: 628 VAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 V+GSVSKKTD V+AGEAAGSKL KAQ LG+ V Sbjct: 817 VSGSVSKKTDYVVAGEAAGSKLEKAQTLGVAV 848 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 272/695 (39%), Positives = 407/695 (58%), Gaps = 34/695 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E+Q+ +L L + + Y+ E+ D +D+L+ +L LE ++PE PDSPT RVG Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYPEFRQPDSPTARVGG 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + H PMLSL N + EE + F+KRVQ L + + CELK DG+A+S+ Sbjct: 64 TISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGLNG-QTYEYICELKFDGVALSLT 122 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL---------------HGENIPARLE 169 YENGVLV ATRGDG G+DIT+N+RTIR +PL++ +PA E Sbjct: 123 YENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAALPALFE 182 Query: 170 VRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV 229 VRGE FLP A F++IN++ G + ANPRNAA+G+ +Q D AKR L + Y Sbjct: 183 VRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLDCYLYSF-- 240 Query: 230 LEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 L ++ TH L+ WG VS C +EV+A+ ++ E R L DG+VI Sbjct: 241 LSDTDIFQTHEESLVAMNAWGFNVSPTWRKCTDIQEVMAYINEWETKRFDLPLGTDGIVI 300 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN QQ LG+ A++PRWA+AFK+ A T + +++QVGRTGA+TPVA L PV +A Sbjct: 301 KVNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTPVLLA 360 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 G +V A+LHNA+EIERLG+ + D V + + G++IP++ V L+ R + ++ +V+PT CP Sbjct: 361 GTIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQPIVYPTTCP 420 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 CG+ + R EGEA C C QR+ +HF+ RRAM+++ +G+ I+ L+++ V Sbjct: 421 ACGTALVRKEGEAHFYCPNEQGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDRGLVQ 480 Query: 470 TPADLFKLTAGKLTGLER--------------MGPKSAQNVVNALEKAKETTFARFLYAL 515 TPADL+ L A L G+E+ K+ +N++ A+E++K FA L+ L Sbjct: 481 TPADLYDLKATDLLGIEKVFLVEETGKKRVVSFREKTVENILTAIERSKSQPFANVLFGL 540 Query: 516 GIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 GIR VG TA L YFG+++A+ A+ E+L VPD G +A V +F + +N+ + Sbjct: 541 GIRYVGNTTAEKLVDYFGSMDAIMNATQEQLLAVPDTGPRIAESVVAWFGDTANQEFVER 600 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L A G+ + + +E D GKT + TG+ + SR++ ++R+ G K+ +SKK Sbjct: 601 LRAAGLQFVGEKKVVEQEGD-SLTGKTFLYTGTFANFSREELESRIEANGGKLLSGISKK 659 Query: 636 TDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLL 669 + +I GE AG SK+ KA++L + +I E E + +L Sbjct: 660 LNYLIVGENAGPSKVEKAKKLNVPMIGEDEFMAML 694 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 307/668 (45%), Positives = 434/668 (64%), Gaps = 8/668 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ + +L L YLYH +D P I D++YD+L R L++L +P+ +S RV Sbjct: 18 ELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRV 77 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G LA F I+H+ M SL NVF E F +++ + CE K+DGLA+S Sbjct: 78 GGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIE------YDIELECEPKMDGLAIS 131 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 I Y+NG A TRGDG GE ++ NV+TIR +PLKL+ N P LEVRGE+ L + F Sbjct: 132 IFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFL 191 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLG 241 +NE + K FANPRNAAAGS+R LD ++ AKRPL + YG+G + P+T Sbjct: 192 SLNEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFE 251 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + + +G +SD + L ++ EV ++HK+ R L +DIDG+V KVN++ Q+ +G Sbjct: 252 LMQLLQSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIG 311 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + AR P+WA+A+KFPA+E + V +VEFQVGRTGAITPVARL+PV V GV+VSNATLHN Sbjct: 312 YTARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNI 371 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 +EI+ +R+GD+V++RRAGDVIP+VV + R D + V PT+CPVC S +E V + Sbjct: 372 NEIKSKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEMPTNCPVCDSKIENVNDQ 431 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ RCTGG C AQ E LKHFVSR+AMD+D +G K+I+QLV + PAD++KL + Sbjct: 432 AIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQ 491 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 LTGLERM KS+QNV++++ K+KE + ARF++A+GI+++GE ++ LA +FG+LE+ A Sbjct: 492 LTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDA 551 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 EEL ++ VG ++A+++ +F+ + N ++ E LA G+ P+ + + F GK Sbjct: 552 KFEELIEINYVGEIIANNIVSFWHDSLNIKIVEEFLAIGIKIQNPVKVEH-AYNESFTGK 610 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TGS R + L +GAKV SVSKKTD+VI G+ AGSKL KAQELG+EVI Sbjct: 611 TVVITGSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGDNAGSKLTKAQELGVEVIL 670 Query: 662 EAEMLRLL 669 E + LL Sbjct: 671 EDNLKDLL 678 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 325/697 (46%), Positives = 417/697 (59%), Gaps = 34/697 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +S E + ELR + ++ Y+V+D P + DAEYDRL+REL E+E HPEL T DSPTQR Sbjct: 8 DSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDSPTQR 67 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT--WCCELKLDGL 119 V AP F ++ H PMLSL N+ + F+ RV L V + E KLDGL Sbjct: 68 VSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPKLDGL 127 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTI------RAIPLKLHGENIPARLEVRGE 173 AV ++YE G LV +TRGDG GED+T+N+RT+ R +P +L GE +P R+EVRGE Sbjct: 128 AVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGE-VPPRVEVRGE 186 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV------ 227 V L + FE +N R G + FANPRNAAAGSLRQLD R+TA+RPL+F Y Sbjct: 187 VLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEALVPGAE 246 Query: 228 --GVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 G G TH +L +WG + CE V A+ ++ E R L +D D Sbjct: 247 PGGARAGPWAWRTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMAERRFALPYDTD 306 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 GVV+KV+ L + +LG ++ PRWAVAFK+P QE+ T +R + VGRTG +TPV EP Sbjct: 307 GVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTPVVDFEP 366 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V ++G +VS ATLHN DE+ R + GD +++RRAG+VIP+VV + R + R FP Sbjct: 367 VRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEERPFAFP 426 Query: 406 THCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP+CG+ V R EGE V RCT G C AQ L HF RRAMD+DG+GDK+ LVE+ Sbjct: 427 AECPICGAKVVREEGEKVYRCT-GAACPAQLVGRLTHFAQRRAMDIDGLGDKLALGLVER 485 Query: 466 EYVHTPADLFKLTAGKLTGLE------------RMGPKSAQNVVNALEKAKETTFARFLY 513 V ADL+ + L + KSAQN+V+ALE++K TT R L+ Sbjct: 486 GLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTLRRLLF 545 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ALGI +VGEATAA LA +FG L AS + L V DVG A + + E NR V+ Sbjct: 546 ALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQNRRVV 605 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 LLA GV V PFAGKTVVLTG L+ +SRDDAKA + G KV+GSVS Sbjct: 606 ERLLAAGVRPAPETVD----AGGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSVS 661 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 +KTDLV+AG AGSKL KAQ LG+ V+ E E LR+L Sbjct: 662 RKTDLVVAGAEAGSKLEKAQALGVRVVGEEEFLRMLE 698 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 288/728 (39%), Positives = 387/728 (53%), Gaps = 66/728 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++ T+L + H LYH DAP+I DAEYD LMREL +E HP L T DSP+Q Sbjct: 15 FDAARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPSQ 74 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG F+ +RH + SLDN F E A+ +RV + + CELK+DGLA Sbjct: 75 QVGGDVSELFASVRHAERLYSLDNAFSPEELTAWVERVTAEVPGEA---YLCELKIDGLA 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLP 177 V++ YENGVLV ATRGDGTTGEDIT NVRTI +IP KL G +P +E+RGEVF+ Sbjct: 132 VNLTYENGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVEIRGEVFMS 191 Query: 178 QAGFEKINEDARRTGG--------------------KVFANPRNAAAGSLRQLDPRITAK 217 FEK+N D ++ANPRNAAAGSLRQ DP ITA Sbjct: 192 TESFEKLNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQKDPTITAS 251 Query: 218 RPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR 277 R L+ YG G G E P K WGLP S + ++ E V + E R Sbjct: 252 RALSMTVYGFGARRGFE-PTHQSQGYAALKAWGLPTSSYFKVLDTVEGVTEYIEHYGEHR 310 Query: 278 PTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAI 337 + +IDGVVIK++ +A Q +LG RAPRWA+A+K+P +E T +RD++ VGRTG Sbjct: 311 HDIEHEIDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKVSVGRTGRA 370 Query: 338 TPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPE 397 TP A LEPV VAG V ATLHN D ++ G+ IGD+V+IR+AGDVIP+V+ V R Sbjct: 371 TPYAVLEPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLGPVEGARTG 430 Query: 398 DTREVVFPTHCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 D E V P++CP CG+++ + EG+ RC C AQ +E L + R +D+DG+G Sbjct: 431 DEHEFVMPSNCPECGTELRQMSEGDIDLRCPNARSCPAQLRERLSYLTGRSCLDIDGLGY 490 Query: 457 KIIDQLVEK-----EYVHTPADLFKLTAGKLTGL-------------------------- 485 LV+ + DLF LT +L + Sbjct: 491 VACTALVQPLEPKQPPLADEGDLFNLTMEQLLPIKSLVLDPDSGLPKKDPKTGKDKEVTY 550 Query: 486 ----ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + A ++ +E AK+ R + L IR VG A LA FG L+A+ A Sbjct: 551 FATQDGAPKAGATKMLEGIEAAKQQELWRIINGLSIRHVGPVAARALATEFGDLDAIRDA 610 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 E L V VG +A+ V +FAE+ + ++ + A GV + E + AG Sbjct: 611 DEERLAAVDGVGPTIATAVKQWFAEDWHVEILEKWRAAGVRFVEE---RPEAGERHLAGL 667 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TGSL +RD A + G KV+GSVSKKT V+ G++ GSK KA +LG+ ++D Sbjct: 668 TVVITGSLEGWTRDGAAEAVRVRGGKVSGSVSKKTSFVVVGDSPGSKYDKAVKLGVPILD 727 Query: 662 EAEMLRLL 669 LL Sbjct: 728 TEGFATLL 735 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 272/669 (40%), Positives = 403/669 (60%), Gaps = 5/669 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ ELR L HH YLY+V AP I D E+D L++EL ++E +P L+TPDSPTQRVG Sbjct: 10 AERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPTQRVGG 69 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 P+ F Q+ H+ PMLS+DN +DE F+ V+ + V + ELK+DG+++S+ Sbjct: 70 QPIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKIDGVSMSLT 129 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENGVL AATRG GT G+D+T N++TI AIPLKL N PA EVRGEV++ + +I Sbjct: 130 YENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMTRGELARI 189 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + + + + N RN AG+L+ DPR A R L FF YG G + G + T L Sbjct: 190 NAEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDIGGLAIT-TQAAMLA 248 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + K++G PV+ +C S +EV+A+ + E R L +D DG+V+KVN AQ+E++G+ A Sbjct: 249 KLKEFGFPVNPHERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQRERIGYTA 308 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE-PVHVAGVLVSNATLHNADE 363 + P+WA A+KF A++ T + V F +G+ G +TPVA + PV +AG V++A++HNA Sbjct: 309 KVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTHASMHNASW 368 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 + +RIGD VV+ + G++IPQVV+V+ ++R + + +P CP CG VE+ E Sbjct: 369 VAERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPVEKEESATS 428 Query: 424 A--RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 C +C AQ + L+ F + M++DG+G ++ QLV+ E V + ADL++LT + Sbjct: 429 YNFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVADLYRLTKAQ 488 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L LE K AQN+++ + +K AR L L I VGEA + L F ++ + AA Sbjct: 489 LLALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMSDLLVEEFPDIDLIIAA 548 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 + E+L +V G A V FF ES R +I++L G+ P AGK Sbjct: 549 APEDLARVKGFGPKRAQFVRAFFDSESGRQLIADLKQFGIKMTHDKKAAPTG-GLPLAGK 607 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TG+L R + + + GAK +GSVSKKTD V+ G+ GSK KA+ELG+++I+ Sbjct: 608 TVVVTGTLVNYDRIGIEQAIKDAGAKASGSVSKKTDFVLVGDKPGSKADKAKELGVKIIN 667 Query: 662 EAEMLRLLG 670 EAE +++G Sbjct: 668 EAEFRQMIG 676 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 266/664 (40%), Positives = 402/664 (60%), Gaps = 4/664 (0%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ +L + HH LY++ P I D E+D L+++L E+E HPE IT SP+QRV Sbjct: 4 QKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNE 63 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 + + F + H PMLSL N + +E F KR+Q + + V + ELK+DG+A++ + Sbjct: 64 SLTSGFKTVAHRTPMLSLANTYSKEEIEDFIKRLQKLVGKRQ-VEFSVELKMDGIAITAI 122 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G+ TRG+G G+DIT+N+R I +PL+L GEN+P LE+RGEVF+P+ F ++ Sbjct: 123 YEQGIFKRGITRGNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQL 182 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 NE + G ++ANPRNAAAGSL+ LDP++ A+R L YG+ + Sbjct: 183 NEQKLQDGEVLWANPRNAAAGSLKLLDPKMVAERRLAVVFYGLAEDSSASIKK-QAEVPS 241 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 F+ GLP + C++ E++ F ++ R L +DIDG+VIK+N Q++LG Sbjct: 242 FFRSIGLPALEHHAYCQNIEQIWKFAEEIRSLRTILPYDIDGIVIKLNDFKDQKRLGVTG 301 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 ++PRWA+A+KF A++ T + D+ Q+GRTG +TPVA LEP+ ++G ++ A+L+N +E+ Sbjct: 302 KSPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEPIFLSGSTIARASLYNQEEV 361 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R +RIGD V I + GDVIP+V+NV LS+RP ++ P +CP CG+ V + GE Sbjct: 362 QRKDIRIGDLVTIEKGGDVIPKVLNVELSQRPLHSQPWQMPLYCPSCGTQVINIIGEVAV 421 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC C Q+ L +FV ++AMD+ MG+KI+ QL +K ++H P+D+F LT G+++ Sbjct: 422 RCPNEDSCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQKGFIHLPSDIFALTEGQISQ 481 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 L K+ QN++ ++E++K + RF+ AL I+ +G TA LAA GT+E L + E Sbjct: 482 LTNFKTKAIQNLMRSIEESKHVSLERFIMALEIKYIGIGTAELLAARAGTIETLMQLNEE 541 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +L K+ VG VA V F +R + LL GV + V + F GK V Sbjct: 542 DLIKIEGVGGKVAQAVVEHFQNPKHRQEVYRLLELGVCPQSKTVQI--FTNHAFQGKIFV 599 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTGSL +R A + + E G KV+ SVS+KT+ V+AG GSKL KA+ LGI V++E E Sbjct: 600 LTGSLEHYTRQSAASLIKERGGKVSDSVSRKTNYVVAGAEPGSKLDKARTLGIPVLNEKE 659 Query: 665 MLRL 668 + L Sbjct: 660 FISL 663 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 290/687 (42%), Positives = 409/687 (59%), Gaps = 19/687 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + L +LR +R H+ LY+V+ EI D EYDRLM L E+E PEL T DSP+Q+ Sbjct: 20 DQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSPSQK 79 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD---RLKNNEKVTWCCELKLDG 118 VG P+ F Q+ H VPMLS+DNV+DE L F ++V + + W E K+DG Sbjct: 80 VGGEPIEGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFKVDG 139 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL----------HGENIPARL 168 +A+S++YE G L+ A TRGDG G+D+T N +TI+ +PL L NIP L Sbjct: 140 VALSLIYEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIPRLL 199 Query: 169 EVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG 228 EVRGE ++ F K+ G + F N RNA AGSL+ LDP++ A+R L FF + +G Sbjct: 200 EVRGEAYIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAHSLG 259 Query: 229 VLEGGEL--PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDG 286 ++ E TH L F + GLP S E +A + E TL F++DG Sbjct: 260 AIDEQEATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFEVDG 319 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 +V KVN+LA + +LG +++PRW VA+K+ E T V ++ QVG+TG +TPVA LEPV Sbjct: 320 LVFKVNNLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVLTPVADLEPV 379 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 +AG VS ++LHN DEIERLGL +GD V++ +AG +IP +V V RP +T FP Sbjct: 380 EIAGTTVSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHIVRVEEHLRPTNTAPYRFPE 439 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CP C + VE+ EG RC + C A+ +ESL++F SR+AMD++G+G K+++QLV Sbjct: 440 TCPECSTIVEQDEGGVYIRCPN-INCPARFRESLRYFASRQAMDIEGLGTKLVEQLVSSR 498 Query: 467 YVHTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 V + +DL++L +L LER+G KS +++ LE +++ R L AL IR VG+ T Sbjct: 499 LVQSISDLYRLVDKRAELLELERLGEKSVDSLLAGLEASRQQPLWRLLTALNIRHVGQRT 558 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A LA FG+++ L A +IEEL P+VG V+A VH+FF E +I EL G++ Sbjct: 559 AQILAERFGSMDRLSAQTIEELSATPEVGEVIAQSVHHFFHTEYGSKLIEELKNLGLNLG 618 Query: 585 APIVINA-EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + +GKT V+TG+L M R++ + + G A SVSKKT V+AGE Sbjct: 619 TESEQKQIAATEGVLSGKTFVVTGTLPSMGREEIEELIRLHGGHAASSVSKKTSFVVAGE 678 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AGSKL KAQ LG+ VI+EAE ++L+G Sbjct: 679 NAGSKLTKAQSLGVPVINEAEFMKLIG 705 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 331/729 (45%), Positives = 424/729 (58%), Gaps = 66/729 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +L L + H+ LYH DAPEI D EYD L+R ELE P L+ DSP+++V Sbjct: 12 EAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSPSRKV 71 Query: 63 GAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGL 119 G A A+ S++ HEV M+SLDN F +E F RV+ L +E + + E K+DGL Sbjct: 72 GHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDKIDGL 131 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE----------------- 162 + S+ YENG LV AATRGDG GED+T NV I IP +L Sbjct: 132 SCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGAGGGPLDDSGSA 191 Query: 163 -------------NIPARLEVRGEVFLPQAGFEKINED-----ARRTGGK---------- 194 N PA E+RGEV++ A F +N K Sbjct: 192 PTPDPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADEKDNAFDTAKVR 251 Query: 195 VFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVS 254 FANPRNAAAGSLRQ D +TA RPL F+ +G G +EG +T + + Q WG+PVS Sbjct: 252 QFANPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVVEQIAAWGVPVS 311 Query: 255 DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFK 314 CE+ EE+LA Y + R L ++IDGVV KV+ L Q++LGFVA+APRWA+A K Sbjct: 312 PLFRRCETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRWAIARK 371 Query: 315 FPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDK 374 FPA++ T + +++ QVGRTG +TPV RL PV V GV V+N TLHN DEIERLG+R GD+ Sbjct: 372 FPAEQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGVRPGDR 431 Query: 375 VVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGA 434 VV++RAGDVIPQVV + + D+ FP CP CGS+ EG RCTGGLIC A Sbjct: 432 VVVQRAGDVIPQVVRNLTPDEKRDS--FEFPDTCPECGSEAVSEEGGVDVRCTGGLICPA 489 Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKLTGLERMGPKS 492 QR E LKHFVSR A+D+DG+G+K IDQ ++ +PAD+F+L ++ LE KS Sbjct: 490 QRTERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEILALEGWMDKS 549 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE------AASIEE- 545 N++ ++E +E AR L LGIR VG TA L YF L AL A EE Sbjct: 550 VDNLLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAEKARAGDEEA 609 Query: 546 ---LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 L + +G V + +FF EE NR V +LL+E +P E +DSP AGKT Sbjct: 610 VVALTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSEV----SPPRYEVETLDSPVAGKT 665 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV TG L MSRD+AKA+ LGAK +GSVS KTDL++AG AGSKL KAQ+LGIEVIDE Sbjct: 666 VVFTGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKLKKAQDLGIEVIDE 725 Query: 663 AEMLRLLGS 671 A ++ + Sbjct: 726 AGWAEIVAA 734 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 335/591 (56%), Positives = 424/591 (71%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Q LR L Y Y+V D P +PDAEYDR+ R L++LE ++P+L+T DSPTQR Sbjct: 5 NDPSLQAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG PL AF Q++HEVPMLSLDN FD+E AF+KR+++RL +E + + E KLDGLAV Sbjct: 65 VGDVPLDAFEQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGLAV 124 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LYENG LV AATRGDG TGE+IT N RTIR++PLKL G ++P RLEVRGEV +P AGF Sbjct: 125 SLLYENGELVRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHAGF 184 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E++N + G K+FANPRNAAAGSLRQLD RITA RPL F+ Y + LEG E P TH Sbjct: 185 EELNARQQEAGLKLFANPRNAAAGSLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTHSA 244 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + WGL V+ + +C E +L FY + E R L +DIDGVV KVN Q+ LG Sbjct: 245 MLDALRDWGLRVNPEIRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQDDLG 304 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 FV+RAPRWA+A KFPAQE++T + V++QVGRTGA+TPVARLEPVHV GV+VSNATLHN Sbjct: 305 FVSRAPRWAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATLHNI 364 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 DEI+RL +RIGD VV+ RAGDVIP+VV + RP + + + P+ CPVCGS++ R + Sbjct: 365 DEIQRLDIRIGDTVVVYRAGDVIPKVVRALPERRPANAQGIALPSSCPVCGSEILRGHDQ 424 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 VARCTGGLICG QR+E++KHF SRRAMD+DG+GDK++D LV++E + T ADL++L A + Sbjct: 425 VVARCTGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLKAEQ 484 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + GLERMG KSA N++ ALE +K RFL+ALGI ++GE TA LA FG L+++ A Sbjct: 485 VAGLERMGEKSADNLIAALEASKTVGLGRFLFALGILQIGEETAKNLADCFGDLDSIRHA 544 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + L VPDVG+ VA + FFAE N VI LLA+GV A V +A Sbjct: 545 PLLLLLAVPDVGLEVAKAIGAFFAESDNEAVIDGLLAQGVSPQASGVPSAA 595 Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 92/173 (53%), Gaps = 8/173 (4%) Query: 504 KETTFARFL-----YALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP-DVGIVVA 557 K T A+ L + + +G+ + L ++F T+ L AA+ E P V V Sbjct: 598 KSLTLAQLLKSAKRLGMNLEGIGDKSLDILGSHFRTVTELSAAAAEGAGAEPKGVRSGVM 657 Query: 558 SHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDA 617 + + AE R + + + A E P G+T VLTG+L Q +R+ A Sbjct: 658 TQLAKALAENDWRGRLQDAEKKVADMAA--RAPQEMESQPLEGQTWVLTGTLEQFTRNQA 715 Query: 618 KARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 K L +LGAKVAGSVSK T +V+AG +AGSKLAKA+ LGIEV DEA +L LL Sbjct: 716 KQALQQLGAKVAGSVSKNTRMVVAGASAGSKLAKAESLGIEVCDEAALLSLLN 768 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 295/669 (44%), Positives = 415/669 (62%), Gaps = 12/669 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 IE+ LR L Y Y+V+DAPE+ DA YD+ REL +LE+++PEL++PDSPT+RV Sbjct: 8 EIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRV 67 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G P +AF + H VPM SL+N F + + +R+ + + + CELK+DG A + Sbjct: 68 GERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIG--PGLEFICELKIDGSATA 125 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YE+GVLV ATRGDG GE+IT N+RTIRAIPLKL G +PA LEVRGE F+P+ FE Sbjct: 126 LSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEFE 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 +IN++ + G K+FANPRNA AG+LRQLD R+ A R L FF Y ++ Sbjct: 186 RINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGR----AESQWEA 241 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L + + G V+ +LC EV F E R L +D DGVV+KVN+ Q ++GF Sbjct: 242 LAELESHGFRVNPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVGF 301 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ PRWA+AFK+PA+E+ T V + QVGRTGA+TPVA L+PV VAG VS ATLHN D Sbjct: 302 TSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQD 361 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 IE L +R+GD V+IR+AG++IP+VV V+ RP + VFP CP CG+ V R GEA Sbjct: 362 RIESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGEA 421 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 RC C A + L H+ + A+++DG+GDK+I +LV VHT ADL++L+A +L Sbjct: 422 AVRCPNPR-CPALIRGKLGHWCA--ALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQL 478 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 GLER+G +SA +V L+++ ++R LY LG+R +G + + LA F + +AL A Sbjct: 479 AGLERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARAD 538 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 + + + G +A V +FA+ NR ++ L A G+ AG T Sbjct: 539 LAAIASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQLAGGGRAAQSSA---LAGLT 595 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 V+TG+L +SR++ A + G KV SVS +T V+AGE AGSKLA+AQ+L + V+DE Sbjct: 596 FVITGTLPTLSREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLKVAVLDE 655 Query: 663 AEMLRLLGS 671 ++ L+ + Sbjct: 656 EQLRALIET 664 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 277/675 (41%), Positives = 406/675 (60%), Gaps = 15/675 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ ++++LTELR T+R+H Y+ D PEI D EYD+LM L+ +E K+PELIT +SPTQ Sbjct: 10 IQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPTQ 69 Query: 61 RVGAAPLAAFSQ-IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG ++H+VPMLSL +VF +E AF + +Q L E + E K+DGL Sbjct: 70 VVGGQARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQEL---EAPEFVVEEKIDGL 126 Query: 120 AVSILYENGVLVSAATRGDGTT-GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 ++++ YE+G LV A TRGDG GED+T N + I +K ++ E+RGEV++ + Sbjct: 127 SMALRYEDGELVRAITRGDGIVQGEDVTENAKVIHD--VKKKLKDKLPYFEIRGEVYMEK 184 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F+ +N G K FANPRN AAG+LRQLD RIT +R L+ F + + G T Sbjct: 185 KAFDAVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNLQTARGRTFT-T 243 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 H KK G+ V +C +A+EV + E+R L +DIDG V+K+N+LA +E Sbjct: 244 HTEAYDFMKKQGIKVIHGYKVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLADRE 303 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 +LG A+ PRWA+A+K+P +E+ T +R +E VGRTG ITP A +P+ + G V ATL Sbjct: 304 KLGATAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATL 363 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I+ L +RIGD V + ++G++IP+V VV +RP T V T CPVCG+ R Sbjct: 364 HNQDFIDNLDVRIGDTVRVYKSGEIIPKVKEVVKEKRPAGTEPFVIGTTCPVCGAPAVRE 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL- 477 + +C C AQ + + +FV R AMD+ G+G+ I +L+E ++ T ADL++L Sbjct: 424 PDTSDIKCKNP-SCPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLYRLG 482 Query: 478 -TAGKLTGLERMG-PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L +G K+ V+ A+E +KE R L LGI +G A L +FG++ Sbjct: 483 GKREELIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIPGIGRTAARELMLHFGSI 542 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +AL AS EE+ +V D+G + A + +F + +++ +++ A GV++ +D Sbjct: 543 DALAKASEEEILEVRDMGEISAKAIVQYFNDPASQKILAAFRAAGVNFTLEDTGL---VD 599 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 FAGKT V+TG+L +SR DA A + G +VAGSVSKKTD ++AGEAAGSKL KA +L Sbjct: 600 EKFAGKTFVITGTLPSLSRKDAAALIESHGGRVAGSVSKKTDYLVAGEAAGSKLQKATDL 659 Query: 656 GIEVIDEAEMLRLLG 670 GI ++DEA + LL Sbjct: 660 GITILDEAGLQALLE 674 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 281/668 (42%), Positives = 414/668 (61%), Gaps = 10/668 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +Q++ +L T+ +H LY+ D PEI D EYD+L REL LE + PEL DSPT Sbjct: 3 IEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTN 62 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG L F + H + M SL NV +EE FL F+ R+Q L + K+ + E K DGLA Sbjct: 63 KVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNQS-KIKYTVENKFDGLA 121 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + ++YE G L A+TRGDG GE++T+NV+ + +P + +L VRGE + + Sbjct: 122 LELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKE---KKKLIVRGEALITKKD 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N++ FAN RNAA+G LRQLD + KR L FF Y + + +L + Sbjct: 179 FEALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNE-Y 237 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + + G + V A++VL Y+ ++E R + ++IDG+VIKV+ + QE+L Sbjct: 238 KSMEFLSELGF-TVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKL 296 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF++RAPR+AVAFKF +E+ T ++++E QVGRTGA+TPVA+LEPV V GV VSN TLHN Sbjct: 297 GFLSRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHN 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 +EI+ +RIGD VV+ R+GDVIP++ VVL +R D++ FP CPVCG D +G Sbjct: 357 PNEIKSKDIRIGDTVVVIRSGDVIPKITRVVLEKRTADSKPFEFPKKCPVCGGDTAVTDG 416 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + + RC C ++ +++FVS+ AM+++ +G + I + V TPADL+K+T Sbjct: 417 DVIVRCIN-EECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRD 475 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L ERMG K A ++ ++E +K TT RF+YALGIR+VGE TA LA YF ++E + Sbjct: 476 DLFKFERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKK 535 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A+I++LQ + +G + A +++F E +I +LLA GV+ V+ E P G Sbjct: 536 ATIDDLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVNPVFEKVVTVES---PLTG 592 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 K VV+TGS+ +R+ AK LGA V +VSK T+++I GE AGSKL KAQ+LG+E++ Sbjct: 593 KNVVITGSIEGFTRNSAKEAAERLGATVQSAVSKNTNILIVGEKAGSKLKKAQDLGVEIM 652 Query: 661 DEAEMLRL 668 + E ++L Sbjct: 653 EADEFIKL 660 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 273/736 (37%), Positives = 405/736 (55%), Gaps = 76/736 (10%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 Q++ LR L H+ LY+ PEI D +YDRL REL LE++HP+L DSPT R+G Sbjct: 10 QRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGDSPTLRIGDD 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN--------------------- 104 + F+++RH ML+LDN +DE F+ RV L Sbjct: 70 RVEGFTRVRHRQAMLTLDNTYDEGELREFHVRVVKALSKENPPPPPPPPPSPTTTATKPT 129 Query: 105 ----------------------NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTG 142 + + + E K+DG+++S+ YE+G L A TRGDGT G Sbjct: 130 EQLDLFAPVPSPPPPPLPPATFDANIAYIVEPKIDGVSISLTYEHGKLTQAITRGDGTEG 189 Query: 143 EDITSNVRTIRAIPLKL-----HGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFA 197 +D+T+NV+TI +P L +PA +E+RGE+FL + F +IN+ G +A Sbjct: 190 DDVTANVKTIHGLPHTLCHAPGTTTPLPALIEIRGEIFLREEEFRRINQQQEEAGDAPYA 249 Query: 198 NPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE------------LPDTHLGRLLQ 245 NPRN AAG+L+QLDP + A R L YG+G E D+ Q Sbjct: 250 NPRNLAAGTLKQLDPTLVASRRLEIVLYGLGACEPAVPPPPPSAPTDALGFDSQTTYQRQ 309 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF--- 302 WGLP +++ + V +++ R T + DG V+K++ AQQ+ LG+ Sbjct: 310 LIAWGLPTVEKIWSVRGIDAVWTAIQELDRLRRTFAYATDGAVVKLDLFAQQKILGYRGA 369 Query: 303 --VARA-------PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 RA PRWA AFKFP T +R + QVGRTG +TPVA L+PV +AG V Sbjct: 370 DATGRAQEARKLSPRWACAFKFPPDRAKTRLRAITIQVGRTGVLTPVAELDPVLLAGSTV 429 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGS 413 ATLHNADEI R +RI D V+I +AG++IP V+NV++ +RP D+ FP +CP C + Sbjct: 430 RRATLHNADEIARKDVRINDTVLIEKAGEIIPAVINVIVEKRPPDSIPYAFPQNCPACNT 489 Query: 414 DVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 R+EGE RC C + + + HFVS+ +D++G+G +I++ L++ + T D Sbjct: 490 PAVRIEGEVAWRCLNPH-CPGKMRRRIAHFVSKACLDIEGLGREIVELLLDHNLIKTIPD 548 Query: 474 LFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 LF+LT +L L++ G + N++NA+ + R ++ LGI +VG A A LA F Sbjct: 549 LFRLTREQLLPLKKSGETWSGNLINAIAARRTADLWRVIHGLGIPQVGAAAAKNLARAFR 608 Query: 534 TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 +L+AL AA++ +L+++PD G A V ++FA+ N+ +I++L G+ P Sbjct: 609 SLDALAAATLPDLERLPDFGATTAQAVRDWFADPHNQELIADLQRAGLAPTPPAAAA--- 665 Query: 594 IDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + P AGKT+VLTG+L ++R+ A ++ G K++ SVSKKT V+AG AGSKL KAQ Sbjct: 666 TNHPLAGKTIVLTGTLPTLTREQATEKIEAAGGKISTSVSKKTHYVLAGAEAGSKLEKAQ 725 Query: 654 ELGIEVIDEAEMLRLL 669 +LG+ ++DEA L+LL Sbjct: 726 KLGVPILDEAAFLQLL 741 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 764 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 257/671 (38%), Positives = 383/671 (57%), Gaps = 6/671 (0%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E +++ L + +H LY+ PEI D E+D+L+ +L LE + P+L P+SPTQR Sbjct: 4 EQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P F+ + H+ PMLSL N + E + F KR +L + + CELK DG+A+ Sbjct: 64 VGGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPG-ATIEFFCELKFDGVAI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+LY+ G L TRGDG G+DIT N + I IP + +++P EVRGE F+ A F Sbjct: 123 SLLYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFEVRGEAFMSLADF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+N D G + ANPRNA AG+L+ L KR L + Y + + TH Sbjct: 183 EKLNRDRLAHGLEPLANPRNATAGTLKTLKST-GPKRWLDCYMYSLLSTDMDLP--THEV 239 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + +KW VS C + EEV+A+ E + +L IDGVVIKVN QQ +LG Sbjct: 240 CIQWLEKWCFHVSPTYKKCRTLEEVMAYIEYWESAKNSLPVAIDGVVIKVNDTLQQNKLG 299 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A++PRWA+A+K+ + T + V++QVGRTG ITPVA L+P+ +AG +V ATLHNA Sbjct: 300 LTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVKRATLHNA 359 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 EI+RL L +GD V I + G++IP++ +S+R D+ V F THCP CG+++ + + Sbjct: 360 GEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLDSEPVKFVTHCPACGTELVKRYEK 419 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 A+ C C Q + LKHFV R+AMD+ +G + I+ L+ + VHTPADL+ L Sbjct: 420 ALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPADLYSLKYQD 479 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 + LE + +NV++ +E +K+ F R L+ALGIR VGE A + Y+ ++ L A Sbjct: 480 IRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKITQYYTDIDTLSNA 539 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI-VINAEEIDSPFAG 600 ++E+L +P +G +A V N+F N +I L G+ P P +G Sbjct: 540 TVEDLIAIPFIGTEIAHSVTNYFENPENLALIDVLKQAGLQLSRPQLATVFATQSLPLSG 599 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEV 659 KT V++G+ R++ K + + G + ++S K + +I GE G K+A+AQ LGI Sbjct: 600 KTFVISGTFQNFEREELKELIKKKGGGILTNISAKLNYLIIGENPGPGKVAQAQALGIST 659 Query: 660 IDEAEMLRLLG 670 I+E E+L++L Sbjct: 660 INETEILQMLE 670 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 763 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 280/663 (42%), Positives = 403/663 (60%), Gaps = 15/663 (2%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 EL L ++ Y+V D P + DAEYD+L EL +E + P +I+ DSP+QRVG P+ Sbjct: 3 YRELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPV 62 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 + HE+ +LSL N + E F + + D E K+DG A+ + YE+ Sbjct: 63 TGLENVTHEIKLLSLSNAYSREELEKFVENIWDE---YPGAEIVVEPKIDGAAMVLTYED 119 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G LV ATRGDGTTGED+T N+RTIR++PL++ R+ +RGEVF+P A FE++N Sbjct: 120 GKLVRGATRGDGTTGEDVTHNIRTIRSLPLEIEKS---GRMIIRGEVFMPVASFERLNRL 176 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFK 247 G K+FANPRNAAAG+L+ LD + +R L F YG+ + HL + K Sbjct: 177 KGEKGEKLFANPRNAAAGTLKLLDSKTAYERGLDVFLYGM----DMGGTEHHLKDMELMK 232 Query: 248 KWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAP 307 G +++ + E++ A + R +L +DIDG VIKV+S A Q LG ++P Sbjct: 233 SLGFNINEMTRKFNNFEDIWAHVEYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSP 292 Query: 308 RWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERL 367 +WA+A+K+PAQE +T +RDV+FQVGRTG+ITPVA+LEPV +AG +SNATLHN DEI RL Sbjct: 293 KWAIAYKYPAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARL 352 Query: 368 GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCT 427 G++IGDKV IR+ GD+IP+VV ++ ER R++ F ++CPVC S +++ E + +C Sbjct: 353 GIKIGDKVTIRKGGDIIPKVVRPIIDERDGSERDIEFLSNCPVCQSKLQKEETDINRKCI 412 Query: 428 GGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLER 487 + C AQRK L HF SR+AMD+ G G+ ++++LV+ +H AD+++ L + Sbjct: 413 NPV-CPAQRKLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDG 471 Query: 488 MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQ 547 G KS Q + A+E +K+ F + LY LGIR VGE TA LA YFG ++ L +A E L Sbjct: 472 YGEKSVQKLHEAIENSKKKPFDKVLYGLGIRHVGERTAQVLAEYFGDIDKLVSADEEALV 531 Query: 548 KVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG 607 V D+G A + N FA + N+I+ L G+ + A E+ GKT V+TG Sbjct: 532 NVRDIGSETAGAIVNSFANDDLSNIINRLKKSGLCFTAEKK---EKASDVLNGKTFVVTG 588 Query: 608 SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLR 667 +LS + RD K + G KV +VS K D ++ GE AGSKL KAQ+LG+ +IDE+ + + Sbjct: 589 TLS-LPRDYFKKVIESNGGKVLSAVSGKLDYLLVGENAGSKLEKAQKLGVAIIDESGLTK 647 Query: 668 LLG 670 +L Sbjct: 648 MLK 650 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 316/740 (42%), Positives = 420/740 (56%), Gaps = 81/740 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ E + L + Y+ DAP I DAEYD R L E+E + P+L SPT + Sbjct: 31 KAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSPTAQ 90 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGL 119 VGAAP F+++ H +PMLSL+N F + AF +RV+ L + + E K+DGL Sbjct: 91 VGAAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKIDGL 150 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++S+ YE G LV AATRGDG GE++T+N RTI IP +L G+ P LE+RGE ++ Sbjct: 151 SLSLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYMSHE 210 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 FEK+N + G+VFANPRNAAAGSLRQLDP +TA RPL FF Y G + T Sbjct: 211 DFEKLN---QSETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVS-ASFAGTQ 266 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 + + + + +G + +C S E+L+ + ++E+ R TLG+DIDGVV KVN LA Q + Sbjct: 267 MEAVRRMQAFGFQTNPLTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQAR 326 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG + PRWA+A KFPA+ T + ++ QVGRTGA++PVARL PV V GV+VSNATLH Sbjct: 327 LGMRSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATLH 386 Query: 360 NADEIE-----------RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHC 408 N D I +RIGD V + RAGDVIP+V +V L++RP + FPT C Sbjct: 387 NEDYIAGRGADGSEIRGGKDIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTTC 446 Query: 409 PVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 P CGS R EG++V RCTGGLIC AQ E L+HFVSR A D++G+G K++++L ++ Sbjct: 447 PECGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGWI 506 Query: 469 HTPADLFKLTAG-------KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVG 521 PAD+F L +L E G KSA ++ A+EK +E AR L+ALGIR VG Sbjct: 507 AEPADIFTLQDRYGPGQLTQLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGIRHVG 566 Query: 522 EATAAGLAAYFGTLEAL-------------------------------------EAASIE 544 E A LA ++G+ EAL A Sbjct: 567 EVAAQDLARHYGSWEALEIALDTARPAALAHRVAEDAALAEREAARAEGRRARPSEARAA 626 Query: 545 ELQKV----------------PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 L +V +G V+A + + FA E R I L++ P Sbjct: 627 ALAQVDLSPEATAAWTGLIAADGIGPVLAMSLSDAFANERERAAIDRLVSFLTVLPPE-- 684 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 A DS AGKT+V TG+L +M+R +AKAR LGA VAGSVS KTDL+IAG AGSK Sbjct: 685 --ARATDSAIAGKTLVFTGTLEKMTRAEAKARAEALGAHVAGSVSAKTDLLIAGPGAGSK 742 Query: 649 LAKAQELGIEVIDEAEMLRL 668 KA ELGI+VIDE E L + Sbjct: 743 AKKAAELGIKVIDEDEWLAI 762 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 299/757 (39%), Positives = 393/757 (51%), Gaps = 93/757 (12%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ +L +R Y+ DAPEI DAEYD L R L +LE HPEL++ DSPTQ V Sbjct: 20 DLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEV 79 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK---VTWCCELKLDGL 119 G AF+ +RH M SL++VF E + +R L W E+K+DGL Sbjct: 80 GGEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALTQVRPGVAPRWLVEVKIDGL 139 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 AV++ Y +G LV AATRGDG TGED+T+NVRTI IP +L GE PA EVRGEVF+ A Sbjct: 140 AVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPAEFEVRGEVFMSSA 199 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F ++N G FANPRNAAAG+LRQ DP +TA+RPL F +G+G +E L ++ Sbjct: 200 AFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHGIGSVEAFGL-ESQ 258 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEE-----VLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 WGLPVS E A+E V+A + R L +IDG+V+K ++ Sbjct: 259 HEAYDALASWGLPVSPYTRRVEGADEEALAAVVAVIEEYGRRRHELIHEIDGIVLKADAF 318 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q LG +R PRWA A+K+P +E T +RD+ VGRTG +TP A LEPV VAG VS Sbjct: 319 ADQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFAVLEPVTVAGSTVS 378 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP------EDTREVVFPTHC 408 ATLHN D ++ G+ IGD VV+R+AGDVIP+VV VL R + RE V P HC Sbjct: 379 LATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLREKAIEAGRELREFVMPAHC 438 Query: 409 PVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE--- 464 P CG+ + EG+ RC C AQ ++H SR A DV+ +G++ LV+ Sbjct: 439 PSCGTPLAPAKEGDVDLRCPNARSCPAQLAGRVEHLASRGAFDVEALGEEAARWLVQGPG 498 Query: 465 --------------KEYVHTPADLFKL---TAGKLTG------------------LERMG 489 + A +F L T +TG + R G Sbjct: 499 EDPAEHEGHVRPEGPGPITAEAQIFDLASGTPEAITGPRGEDGLTDLQRSLGAVRVWREG 558 Query: 490 PKSAQ--------------------------------NVVNALEKAKETTFARFLYALGI 517 + + LEKAK R L AL I Sbjct: 559 RTKVDGRMVPSGVFTLKPYFFTAGTAKRPSAPTANTLRLFDELEKAKSQPLWRTLVALSI 618 Query: 518 REVGEATAAGLAAYFGTLEALEAASI----EELQKVPDVGIVVASHVHNFFAEESNRNVI 573 R VG A LA FG++ AL AA+ + L ++ VG ++A + +FAE+ +R ++ Sbjct: 619 RHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEIDGVGPIIADALIEWFAEDWHREIV 678 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 A GV E G TVV+TGSL SRD AK ++ G K +GSVS Sbjct: 679 DRWTAAGVAMEDE---QDESTPRTLEGLTVVVTGSLEGFSRDSAKEAILVRGGKASGSVS 735 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 KKTD ++AGEAAGSKL KAQ LG+ V+DEAE LL Sbjct: 736 KKTDFLVAGEAAGSKLDKAQSLGVPVLDEAEFTALLA 772 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 291/671 (43%), Positives = 407/671 (60%), Gaps = 14/671 (2%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 Q+ LR L +H + Y+ +D PEI D YD L+ ELR LE HPEL+TPDSPTQRVG Sbjct: 7 AQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSPTQRVGG 66 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLA 120 A ++ ++RH MLSL N E+ LA+ +R++ L + + + E K+DGLA Sbjct: 67 AVVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEPKVDGLA 126 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG L+ TRGDG GED+T N+RTI IP ++ G PA LEVRGEV++ A Sbjct: 127 MSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGA--PAWLEVRGEVYMSLAD 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N G F NPRN+AAG++RQLD R+ A+RPL+ +CYG+G EG TH Sbjct: 185 FEALNLRRAEEGRSTFMNPRNSAAGTIRQLDSRLAAERPLSMWCYGIGETEGIS-FSTHW 243 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + G PV+D + +AE+V+A + +E R +L F+IDGVV+KV+ + Q +L Sbjct: 244 ESLQWLRAHGFPVNDEIRRIRTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVELQRRL 303 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G V R PRWA+A+KFP +T + DV + VG+ G + P A LEPVHV GV V ATLHN Sbjct: 304 GVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKLATLHN 363 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERV 418 +++ R +R GD V++ RAGDVIPQV++ ER + P CPVC + + Sbjct: 364 EEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVCDTPTVKG 423 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 EG +C C +R + L+H+VSR AMDVDG+G+K + L+E + TP D ++L+ Sbjct: 424 EG-VFTKCPN-RDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYYRLS 481 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 A +L L+R G SA+N V A+ +KE F R L+ LGI VG T LA F T++AL Sbjct: 482 AEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTIDAL 541 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 AAS EE+ P +G +V +H+ +E R VI +L A GV + P Sbjct: 542 TAASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRM---EEDGPPPGEGPL 598 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 A K +VLTG+L ++R++A R++ G +V SVS++TD V+AGE AG+KL KA+ L + Sbjct: 599 ADKAIVLTGTLPTLTREEATERILAAGGRVTSSVSRRTDYVVAGERAGTKLEKAERLRVP 658 Query: 659 VIDEAEMLRLL 669 V+DE + LL Sbjct: 659 VLDEDGLEALL 669 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 264/672 (39%), Positives = 403/672 (59%), Gaps = 7/672 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +I++ + +LR L+ Y YHV++ + D+ YD+L R+L LE ++P LI+ DS TQRV Sbjct: 5 NIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSVTQRV 64 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 G P F+ ++H++P+ SL+N F+ + A+ R Q LK+ E + + ELK+DG A Sbjct: 65 GEKPALHFNSVKHDIPLYSLENAFNLQELEAWENRNQKYLKSQENQLIKYIAELKIDGSA 124 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L TRGDG GEDIT N+RTI +IPL L+ ++ P+ + V GE FLP Sbjct: 125 LSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAFLPLDE 184 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++IN+ ++ G +FANPRNAAAG+LRQLD +I ++R L FF Y + + Sbjct: 185 FKRINKQKQKEGKSLFANPRNAAAGTLRQLDSKIVSERKLQFFAYSLYADNLD--IKSQW 242 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L ++ G V+ LC+S + V ++++ + + L + DGVVIK+NS Q++L Sbjct: 243 DTLKFLQECGFLVNPYYRLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHILQKEL 302 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + R PRWA+A K+PA+E T V D+ F GRTGA+TP+A + PV + G +V ATLHN Sbjct: 303 AYTQRFPRWAIALKYPAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVRKATLHN 362 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I +LG+ IGD V IR+AG++IP+V+ V+ + R T+ CP C S + Sbjct: 363 IDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCPKCNSMLVSFSN 422 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 EAV RC C A K +L H+ SR A+D+ G+G+KIID L+ V++ +DL+ L Sbjct: 423 EAVVRCINN-SCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVNSISDLYHLNFQ 481 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +++ LERMG KSA+N++ ++E +K ++ + LY LGI VG TA L F +++ L Sbjct: 482 EVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLTENFSSVQQLLQ 541 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID--SPF 598 A + L + +G VA + ++F+ E N+ +ISEL G + + F Sbjct: 542 APYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISELDKNGFVLENKNLGINQNKPDKQIF 601 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 T V+TGSL+ + R + K + G KV SV+KKT+ ++ GE GSKLA+ +L I Sbjct: 602 FNITFVITGSLNTLKRSEIKNLIENFGGKVVNSVTKKTNYILVGENPGSKLAEGMKLNII 661 Query: 659 VIDEAEMLRLLG 670 ++E + LR+L Sbjct: 662 RLNETDFLRILK 673 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 289/698 (41%), Positives = 407/698 (58%), Gaps = 45/698 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +IE ++ EL L Y Y+ +D P + D+EYD L EL +LE ++P+L+ DSPT R Sbjct: 2 NIESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRT 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G L F + RH + SL +VF E + +RV+ + + CELK+DGL++S Sbjct: 62 GGVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIV---NPEYICELKIDGLSLS 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + YENG+LV+AATRGDGTTGE+IT NV+ I+ +PLKL + VRGE +LP+ F Sbjct: 119 LYYENGLLVTAATRGDGTTGENITENVKRIKDVPLKLKEA---IDIVVRGEAYLPRQNFA 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+N + G FANPRNAAAG+LRQLD +I AKR L F Y DT Sbjct: 176 KLNAERELEGAAPFANPRNAAAGTLRQLDTKIVAKRGLATFLYQ---EASPATNDTQEEV 232 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L F++ G V+ + +E+ F + R L +DIDGVVIKVN+LA+QE+LGF Sbjct: 233 LEYFEELGFQVNPERKFARNLDEIWEFIEEATRLRDELPYDIDGVVIKVNNLAEQEELGF 292 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +APRWA+A+KFPA++ T + V++ VGRTG +TP A + V +A V+ ATLHN D Sbjct: 293 TVKAPRWAIAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVD 352 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR---------------------- 400 I+ +R DKV+I +AGD+IP+V V+L +R Sbjct: 353 YIQEKDIRNHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEK 412 Query: 401 ----------EVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD 450 V PT CP C SD+ E E RC L C AQ +E L HF SR AM+ Sbjct: 413 GLVFSKREDNRVKIPTQCPECDSDLIHFEDEVALRCVNPL-CPAQIREKLIHFASRDAMN 471 Query: 451 VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFAR 510 + G+G +I QL +K+ V ADL++LT L L+++ AQ +V+A+ +++E + + Sbjct: 472 IVGLGPSVISQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAEK 531 Query: 511 FLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 L+ LGIR VG A L F L AL AS EE+ ++P +G V+A+ V ++F + Sbjct: 532 LLFGLGIRHVGGKAAKLLLERFANLRALSQASEEEISEIPSLGGVIATAVVSYFETAGAK 591 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 ++ EL G+++ + A ++ +GKTVVLTG L+ + R +AK +L LGA V+G Sbjct: 592 TLLDELENAGLNFAY---LGAVNVEGILSGKTVVLTGKLTTLKRTEAKEKLEALGANVSG 648 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 SVSKKTDLV+AGE AGSKL KAQ+LGIE+ E ++L L Sbjct: 649 SVSKKTDLVVAGEEAGSKLTKAQDLGIEIWSEQDLLDL 686 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 285/692 (41%), Positives = 406/692 (58%), Gaps = 30/692 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 +SI ++ +L + H LY+ APEI D +YD+L+ EL +LE HP+L PDSPTQ Sbjct: 10 DSIASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQL 69 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG + Q+ H VPMLS+DN + E A +R++ L+ E V W E K+DG+A Sbjct: 70 VGGDVVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEG-ESVAWTMEYKIDGVAG 128 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH----------GENIPARLEVR 171 SI YENG L A TRG+G G+DIT NVRTIR +P + G N+P LEVR Sbjct: 129 SIRYENGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEVR 188 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GE+++ A +N G + F N RN AG++R LDP+I A R + FFC+G G L Sbjct: 189 GELYMTDADLADLNVRQTDAGHEPFKNTRNVTAGTIRLLDPKIAASRNIRFFCHGSGELV 248 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G D H+ L + G+P++ V E+ E+ L K+E + P L F+IDG+V KV Sbjct: 249 GVRASD-HMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFKV 307 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 +S Q+E+LG +++PRW +A+KF E +T + ++ QVG+TG ITPVA L PV +A Sbjct: 308 DSFEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIADT 367 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VS A+LHNADEIERL +R+GD VV+ +AG +IP+VV V R + + FPTHCP C Sbjct: 368 TVSRASLHNADEIERLDVRVGDTVVVEKAGKIIPKVVRVEKHARTKPLPKFEFPTHCPQC 427 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + R EG RCT C AQ ++ L +F SR MD+DG+G++++D L++KE V Sbjct: 428 DEVLTRDEGGVYIRCTNP-ACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVENY 486 Query: 472 ADLFKLTAGKLTGLE---------------RMGPKSAQNVVNALEKAKETTFARFLYALG 516 ADL++L +L L + G K+A+++V + +++ AR L ++ Sbjct: 487 ADLYRLNVDELAELTWPRLRKGKGDEMIEVQFGRKNAESLVAGINESRTRGLARVLSSIS 546 Query: 517 IREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISEL 576 IR +G A + A F L+ L +A E+L + ++G +A + F ES +S+L Sbjct: 547 IRHIGPRVAKLITAKFWNLDLLRSAKAEDLAAIHEIGDRIAESLVKFIHSESGSQTLSDL 606 Query: 577 LAEGVHW--PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSK 634 A GV P+ EE + P AGK +V TG+L +RD+ KAR+ ELG + A SVSK Sbjct: 607 DAVGVTMSETEPVATPDEEANLPLAGKNIVATGTLQHYTRDEIKARIEELGGRAASSVSK 666 Query: 635 KTDLVIAGEAAGSKLAKAQELGIEVIDEAEML 666 KTD +IAGE AGSKL KA+ LG+EV+ E + Sbjct: 667 KTDFLIAGEKAGSKLTKAESLGVEVLSEDDFR 698 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 272/729 (37%), Positives = 385/729 (52%), Gaps = 63/729 (8%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 S+++Q L ++ +++ Y++ +PDA+YD L+ EL +E + SPTQRV Sbjct: 52 SLQEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGG-APQGSPTQRV 110 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F ++ H PMLSLDN F E A+ RV L V++ CE+K+DGLAVS Sbjct: 111 GGTFSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGGA-VSYLCEVKIDGLAVS 169 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEVFLPQAG 180 + YE G LV A TRGDG TGED+T NV+TIR+IP +L G+ P +E+RGEVF+ A Sbjct: 170 LTYERGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMKVAD 229 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---- 236 F +N+ R GGK FANPRNAAAGSLRQ DPR+TA+R L+ + +G+G LE Sbjct: 230 FADLNDSQARQGGKTFANPRNAAAGSLRQKDPRVTAQRRLSMYAHGIGALEWDGQSPVDL 289 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 +++WG+PVS ++ + V E+R ++ ++DG VIKV+ +A Sbjct: 290 ARQSDVYALYQQWGIPVSSHNSVEHDLDAVTRKIEYYRENRHSIEHELDGFVIKVDEVAA 349 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q+QLG +RAPRWA+AFK+P +E T + D++ VGRTG +TP +EPV VAG VS A Sbjct: 350 QKQLGSTSRAPRWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGSTVSMA 409 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN E+ R +R GD V++R+AGDVIP+++ V S RP+ + PTHCP CG+++ Sbjct: 410 TLHNFHEVRRKDVRPGDTVIVRKAGDVIPEILGAVESLRPDGLPQWEPPTHCPSCGTEIR 469 Query: 417 R-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE--------- 466 EG+ RC C +Q +E + SR A D++ +G + L + E Sbjct: 470 EAKEGDKDLRCPNAQSCPSQLRERVFALASRGAFDIEALGWESAVALCDPESSRPVGPDA 529 Query: 467 ----------YVHTPADLFKLTAG---------KLTGLERMGPKSAQ------------- 494 + + A +F L + KS Sbjct: 530 PQLDGPPLTPVLTSEAHIFDLADENSSLTRSLKDVVVWRERKLKSGTRWELVPYFYTRAT 589 Query: 495 ------------NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + ++KAK R L AL IR VG A LA FG+++ + AAS Sbjct: 590 ASKSSVPTATTVKLFEEVQKAKSQPLWRVLVALSIRHVGPTAARALATEFGSMDRIRAAS 649 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW-PAPIVINAEEIDSPFAGK 601 + EL V VG +A V +F E ++A + I E + G Sbjct: 650 VSELAAVDGVGSTIAESVVEWFREVDGNQWRPAIVAAWAKAGVSMEDIPDESVQRTLEGI 709 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVID 661 TVV+TG L +RD K +V G K +GSVSKKTD V+ G AGSK KA+ELG+ +++ Sbjct: 710 TVVVTGGLENFTRDGVKEAIVARGGKASGSVSKKTDFVVVGANAGSKETKARELGLRILN 769 Query: 662 EAEMLRLLG 670 E E RLL Sbjct: 770 EEEFTRLLA 778 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 289/691 (41%), Positives = 390/691 (56%), Gaps = 29/691 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ + + + Y+V+D+P I DA++DR MR L LE + PEL TPDSPTQ Sbjct: 61 TDPREEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQT 120 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A F+ H M SLDN F E A+ R++ E CELK+DGLA+ Sbjct: 121 VGGAVSTDFTSHPHLRRMESLDNAFSVEEVEAWYARLRR--DGVEDPALLCELKVDGLAI 178 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRGEVFLPQ 178 ++LYE G LV A TRGDGTTGED+TSNV+TI ++P +L G + +PA +EVRGEVFLP Sbjct: 179 NLLYEEGRLVRALTRGDGTTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPV 238 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 FE++NE G FANPRN+AAGSLRQ DPRITA R L C+G+G G E P Sbjct: 239 EAFERLNESLLEAGKAPFANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFE-PQA 297 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTL-GFDIDGVVIKVNSLAQQ 297 WGLP SD+V + + + V + R T+ ++IDGVV+KV+ +A Q Sbjct: 298 QSHAYDALAAWGLPTSDQVRVVSTLKGVEGYIENAGARRHTIVPYEIDGVVVKVDDVALQ 357 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 +LG +RAPRWA+AFK+P +E + ++ VGRTG +TP A +EP VAG V NAT Sbjct: 358 RRLGSTSRAPRWAIAFKYPPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENAT 417 Query: 358 LHNADEIERLGLR------IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 LHN E+ER +R GD V++R+AGDVIP+++ VL+ RPE + V PT CP C Sbjct: 418 LHNFYEVERKDVRPGGPGDPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSC 477 Query: 412 GSDVE-RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 G+ + + EG+ RC C Q +E + SR A D++G+G + L++ E + Sbjct: 478 GTPLVEQKEGDKDRRCPNHEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIAN 537 Query: 471 PADLFKLTAGKLTGLERM--GPKS----------AQNVVNALEKAKETTFARFLYALGIR 518 D+F L A L PK Q +++ L+KAK+ R L AL IR Sbjct: 538 EGDVFDLDAAALLRAPLFTRAPKKDEDGPQLSANGQRLLDNLDKAKQVPLWRVLVALSIR 597 Query: 519 EVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLA 578 VG LA FG++ A+ AA+ E+L VG +A V +F E + ++ + Sbjct: 598 HVGPKAGRALATEFGSMAAIRAATEEQLAAAEGVGPTIAEAVIEWFKEPWHVEIVDKWER 657 Query: 579 EGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDL 638 GV E AG TVV+TGSL SRD AK ++ G K AGSVSKKTD Sbjct: 658 AGVTMADE---RDESTPRTLAGLTVVVTGSLVDFSRDSAKEAILSRGGKAAGSVSKKTDY 714 Query: 639 VIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 V+ GE AGSK KA++LG+ V+DEA LL Sbjct: 715 VVVGENAGSKADKAEQLGVPVLDEAGFKTLL 745 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 749 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 333/780 (42%), Positives = 445/780 (57%), Gaps = 111/780 (14%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + +Q++ L TL + + Y+ +DAP +PDAEYDRL REL LE +HP+ P+SPTQ Sbjct: 1 MSTPQQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDE----------ESFLAFNKRVQDRLKNNEKVTW 110 RVG A L F + H VPMLSL+N F FLAF++RV L +V + Sbjct: 61 RVGGAVLDGFETVVHAVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKELG-VAQVEY 119 Query: 111 CCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEV 170 E K DGLAVS+LY+NG+LV AATRGDGTTGE++T N++T+R IPL+LHGE PA LEV Sbjct: 120 AAEPKFDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEV 179 Query: 171 RGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL 230 RGEV + +A F +N+ G K FANPRNAAAGSLRQLD +ITA+R L FF YG+ L Sbjct: 180 RGEVLMLKADFAALNQRQLEAGQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQL 239 Query: 231 EGGE-LPDTHLGRLLQFKKWGLPVSD-RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVV 288 G E LP++H+ L + G + A VL Y ++ E RP L ++IDG+V Sbjct: 240 SGVERLPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGMV 299 Query: 289 IKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHV 348 +KVNSLA+Q+QLGFV+RAPRWA+A KFPA+E +T V ++ QVGRTGA+TPVARL PV V Sbjct: 300 VKVNSLAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVFV 359 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED---------- 398 GV V+NATLHN DE+ R +R+GD VV+RRAGDVIP+VV V+L RP Sbjct: 360 GGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQME 419 Query: 399 --TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGD 456 P CPVCGS VER GEAVARCTGG++C AQR + L HF SR+AMD+ G+GD Sbjct: 420 PLHEPFRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLGD 479 Query: 457 KIIDQLVEKEYVHTPADLFKLTAGKLTGLER---MGPKSAQNVVNALEKAKETTFARFLY 513 K I+ LV + +H+ AD+++L KL ++ K AQN+++++ +++ ARFL+ Sbjct: 480 KQIEALVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFLF 539 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ALGIR VGE+TA LAA FG L+ + A L +PD+G VVA + ++F + + + ++ Sbjct: 540 ALGIRHVGESTAKQLAAAFGNLDTVRRAPEPILACLPDIGSVVAHAIAHYFRQPAQQKML 599 Query: 574 SELLAEGVHWPAPIVINAEE-----------IDSPFAGKT----VVLTGSLSQMSRDDA- 617 +LL A + + K L GSL + D A Sbjct: 600 DDLLQHVAPQAAAPSPQTRANAAPEQWLQRLPNIKLSEKRAAELWQLAGSLHALQTDQAL 659 Query: 618 ------------------------KARLVELGAKVAGS-------VSKKTDLVIAG---- 642 +A V+GS ++ KT V+ G Sbjct: 660 PQEWQNWRRQPAHAALLQEITAFTEALPESSTDNVSGSLHPENHPIAGKT-FVLTGTLPT 718 Query: 643 ----------EAAGSK---------------------LAKAQELGIEVIDEAEMLRLLGS 671 EAAG K L KAQ LG+ V+ E E+L +LG+ Sbjct: 719 LKRDQAAALIEAAGGKVSGSVSKKTDFVVAGEAAGSKLEKAQALGVAVLSEEELLGMLGN 778 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 747 bits (1930), Expect = 0.0, Method: Composition-based stats. Identities = 258/672 (38%), Positives = 393/672 (58%), Gaps = 12/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E I ++ +L+ L Y+V D P + D EYD ++EL LE +PE IT DSP+Q+ Sbjct: 4 EQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSPSQK 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F +I H+ PMLSL NVF+ + FL FN +V N + ELK+DGL++ Sbjct: 64 VGGTVSEKFLKITHKTPMLSLGNVFNFDEFLEFNTQVSKVSNNLNN-EYVAELKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++YENGVLVSAATRG+G GED+T+NVRTI++IPLK+ R+EVRGE++L +A F Sbjct: 123 SLVYENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKISK---KERVEVRGEIYLSKAEF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN+ +F NPRNAAAG+LRQLD +I A R L F Y + L Sbjct: 180 EKINQKRLLNNEDLFINPRNAAAGTLRQLDSKIVASRNLDAFLYYYISDDSPNL--NQYE 237 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 +L+ + G + LC++ +++ A+ K + L + IDG+V K+N Q LG Sbjct: 238 SILKLNQLGFKTNKETMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLG 297 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F ++ P+WA+A+KFPA+ + T + D+ VGRTG IT A+LEPV + G +S ATL+NA Sbjct: 298 FTSKIPKWAIAYKFPAEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNA 357 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I+ LRI V I++AGDVIP+V+ + E + +CP C S +E+ E E Sbjct: 358 EYIKSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNLEVFQPILYCPNCHSLLEKNENE 417 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--A 479 C C + SL+HF SR AM++ +GD+ ++ L E + +D++KL Sbjct: 418 VDQFCINS-SCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEYK 476 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 ++ +E G KS N+++++ +K + + L+ LGIR +G TA LA + ++ L Sbjct: 477 DQILAIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNLM 536 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS +EL ++ +G +A + ++F E N +I+EL + +++ DS A Sbjct: 537 KASYDELIQINSIGESLALSIIDWFKIEDNLKLINELKSFNINFNYLGAKI--NSDSIIA 594 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 KT V+TG+L++ R++ K + K++GS+SK+TD ++AG GSKL KA++LG+ + Sbjct: 595 NKTFVITGTLTR-PREEFKTLIENNAGKISGSISKQTDYLLAGNNVGSKLEKAKKLGVII 653 Query: 660 IDEAEMLRLLGS 671 IDE + LL S Sbjct: 654 IDEQQFFDLLKS 665 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 291/695 (41%), Positives = 405/695 (58%), Gaps = 34/695 (4%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAP--EIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +++ ELR + H+ LY+ P EI D EYD L +EL+ELE++ PE + DSPTQ Sbjct: 14 VAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQI 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-KVTWCCELKLDGLA 120 VG + F +++H VPMLS++N L+ + + LK++ + E K+DGL+ Sbjct: 74 VGGSVSEGFKKVQHSVPMLSIEN-KPVTKMLSEVRSIIKELKDDAISIDIVAEPKIDGLS 132 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 SI YE LV AATRGDG GEDIT NV +I IP L + P +E+RGEV++ + Sbjct: 133 CSIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIPKILPL-DAPEVIEIRGEVYMSNSD 191 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F++ + G K NPRNAAAGSLRQLDP +TA RPL FF Y G + + Sbjct: 192 FKQYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISN-SFAKSQW 250 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L + WG V D + L S++E+ +++ +++E R L F IDG+V K+NSL+ QE++ Sbjct: 251 DALQTLRGWGFKVCDDIRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLNSLSLQERV 310 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G RAPRWA A KFP +++ T ++++ VGR+GA+TPVA L PV + G VSNATLHN Sbjct: 311 GQTNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTTVSNATLHN 370 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DE+E RI D +V++RAGDVIPQVV+VV+ +R + VFP+ CPVCGS R Sbjct: 371 QDEVECKDFRIDDTIVVQRAGDVIPQVVSVVIEKRLSGSIPFVFPSACPVCGSKAVREPR 430 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 EAV +CTGGL C AQ E LKHFVSR A ++DG+G+K I+ K + +P D+F+L Sbjct: 431 EAVWKCTGGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASPVDIFRLEEI 490 Query: 480 --------------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA 525 L + G SA N+ A+ ++ T RF+YALGI +VGE TA Sbjct: 491 LSPPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALGIPKVGEVTA 550 Query: 526 AGLAAYFGTLEALEAASI----------EELQKVPDVGIVVASHVHNFFAEESNRNVISE 575 LA + +L+ +++ + + L + +G VVA + +FFAE N V+ Sbjct: 551 KILADNYVSLDNWQSSMLKAAERESECYQHLISIDGIGSVVADEIVSFFAEAHNIQVLDS 610 Query: 576 LLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKK 635 L + I S +GK VV TG L + SR AK + GAKVA VS+K Sbjct: 611 LKN---YLSVEDFTKPAIISSNISGKIVVFTGELEKRSRKAAKIEAEKFGAKVATDVSRK 667 Query: 636 TDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 TD+VIAG GSKL KAQELGI+++ E E L+ Sbjct: 668 TDIVIAGTDPGSKLRKAQELGIKILSEDEWEHLIN 702 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 276/679 (40%), Positives = 390/679 (57%), Gaps = 23/679 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + EL+ L LY+ + D ++D ++E+ LE K+PEL S TQ+VG+ Sbjct: 9 RTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPELRGKGSLTQKVGS 68 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN----EKVTWCCELKLDGLA 120 F+++ H VPMLS+ NV+ EE F K ++ L + W CE K+DG++ Sbjct: 69 DLTNDFAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICERKIDGVS 128 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIP-------LKLHGENIP-ARLEVRG 172 +S++YENG L AATRGDG G+D+T N TI IP LK+ IP EVRG Sbjct: 129 LSVIYENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQGTFEVRG 188 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 EV++ + FE++NE K F N RN +GSL+ RP+ FF Y + Sbjct: 189 EVYMEREAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYHIPQSNN 248 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 TH L Q K+ G +D T ++ +E++A K+ R +L FDIDG+V+K+N Sbjct: 249 ----KTHEENLKQLKRLGFHTNDYWT-ADTVDEIMAISEKIGASRDSLPFDIDGMVVKLN 303 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 L QQ +LG +++PRWA+A+KF A+ T + VEFQVGRTGA+TPVA L PV +AG Sbjct: 304 DLQQQRELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLAGTT 363 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V ATLHN DE+ RL L GD V + + G++IP++ +V RP VV P CPVCG Sbjct: 364 VKRATLHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCPVCG 423 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 + ++GE + RC L C AQ + +HFVSR AM+++ +G +I L+ + Sbjct: 424 EQLTHIDGEVILRCEN-LHCKAQVQCLFEHFVSREAMNIENLGPALIASLLATGKIKRIP 482 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL++LT L ERM KSA+NV +A++ +K+ + L+ LGIR VG +A +A +F Sbjct: 483 DLYRLTLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRTSARNIAKHF 542 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 TLE + A++EELQ V DVG + V+ FF N I EL+A G+ V+ Sbjct: 543 RTLEKIRTATVEELQNVTDVGERIGKSVYEFFHTPLYTNEIDELVALGLPTEFKGVVKT- 601 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 F G+T V+TG+L M RD+A+ + E G KV+GSVSKKT V+AGEAAGSKL KA Sbjct: 602 ----LFQGQTAVITGTLPNMDRDEARKLIEENGGKVSGSVSKKTSWVLAGEAAGSKLTKA 657 Query: 653 QELGIEVIDEAEMLRLLGS 671 ELGI V DEA ++ + + Sbjct: 658 NELGIPVHDEAWLMAQIAN 676 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 337/651 (51%), Positives = 432/651 (66%), Gaps = 32/651 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ +LRT L H Y Y+V+D P IPDAEYDRL REL+ LET++P+L+TPDSPTQR Sbjct: 5 QAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQR 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL----------KNNEKVTWC 111 V P +AF ++RHE+PMLSL N F+E+ L F++RV++ L +V + Sbjct: 65 VSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVEYS 124 Query: 112 CELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 CE KLDGLAVS+LYE G LV ATRGDG+TGEDITSNVRTIR +PLKLHGE P LEVR Sbjct: 125 CEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVR 184 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEVF+ +AGFE +N A TGGK FANPRNAAAGSLRQLD +ITA RPL F YG G + Sbjct: 185 GEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQVS 244 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G LPDT +G L F+ WG+P+S + L + A+ +Y + R L ++IDGVV KV Sbjct: 245 G-TLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVVFKV 303 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 N +A Q +LGF AR PRWA+A KFPA+E++T + VEFQVGRTGA+TPVARL+PV VAGV Sbjct: 304 NRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVAGV 363 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 VSNATLHN DE+ RLGLRIGD VVIRRAGDVIPQV+ VVL RP D + + P HCPVC Sbjct: 364 TVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHCPVC 423 Query: 412 GSDVERVE------------GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII 459 GS VER + A+ RC G L C AQ K+++ HFVSRRAMD+DG+GDKI+ Sbjct: 424 GSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKIV 483 Query: 460 DQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIRE 519 +QLV++ V +PADL+ LT ++ LE S N++ A+ +++ + ARF++ALGI + Sbjct: 484 EQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFALGIPD 543 Query: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 VGE TA LA G+LE + A E L +PDVG VA +HNFFA+E NR VI++L Sbjct: 544 VGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQLRDA 603 Query: 580 GVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSR-----DDAKARLVELG 625 + A L G + +++ A+ G Sbjct: 604 EHGVQLQEEGEVAAEFAACA----SLAGFIDKLNIPFIAATGAEKLASRFG 650 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 66/163 (40%), Positives = 92/163 (56%), Gaps = 1/163 (0%) Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 + A F+ L I + A LA+ FG+L+ + A +L++V + A + +FF E Sbjct: 624 SLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFDE 683 Query: 567 ESNRNVISELLAEGVHWPAP-IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELG 625 +N + A+ + P AG+T VLTG+L MSRD AK +L LG Sbjct: 684 PANVQRALAIEAQLREFGMHWQSERKAVEGLPLAGQTWVLTGTLEAMSRDVAKDKLEGLG 743 Query: 626 AKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 AKVAGSVS KT V+AG AGSKLAKA ELG++V+DE +L+L Sbjct: 744 AKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKL 786 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 260/670 (38%), Positives = 373/670 (55%), Gaps = 16/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q+ E L+ Y Y+V+D PE+PD YD+L RE+ E E HP+ I P SPTQ Sbjct: 1 MIKNYQEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+GA P F +I+H M S+++VF++ + +RV + + + E K DG + Sbjct: 61 RIGAEPAKEFKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKD-LQFYIEPKFDGAS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++++YENG+L SAATRGDG GED+T+N +TI +IPL + + +E+RGEV + + Sbjct: 120 LNLIYENGLLKSAATRGDGEVGEDVTANAKTIPSIPLGI---DYKGLIEIRGEVVIRKDD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FEK+N + G FANPRNAAAGSLRQLDP++TA+R L F+ + +G Sbjct: 177 FEKLNHERALKGESTFANPRNAAAGSLRQLDPKVTAQRKLYFYPWDIGY--NTLNFKYQH 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ + G + +CE+ EE+ Y + ++R L +DG+V+KV+ +A E L Sbjct: 235 EKMDFVYQQGFIKPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKVDEIALHEIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ + PRW VA+KFPA E+MT + D+ QVGRTG ITPVA LEPV + GV+V ATLHN Sbjct: 295 GYTVKYPRWMVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EIER +RIGD V++ R+GDVIP+V V+ R ++V P CPVCG V ++ Sbjct: 355 YAEIERKDIRIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPV--LDE 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + +C L C A+ S+ +F S++ +D+ G+G+ + L EK V DLFKL Sbjct: 413 GILIKCQN-LSCPARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L K AQN+++A + K RF+ ALGI +GE + L FG Sbjct: 472 DLLRLPGFAEKKAQNLIDATQSVKGVECWRFVNALGIEHIGEVASKKLCEKFGL--DWYK 529 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 A E+L ++ G + + F + + P E +SP A Sbjct: 530 APKEKLYEIEGFGPEMVRSIEEFVEVNKEKIE----KLIELLQPTEPKKEEEVENSPLAH 585 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG + ++ R K L GA V SVS TD V GE GSK KAQ+LG+ ++ Sbjct: 586 KTVVLTGEM-KLPRSKIKELLERAGAHVTNSVSHHTDYVFYGENPGSKFQKAQQLGVPLL 644 Query: 661 DEAEMLRLLG 670 E +M LL Sbjct: 645 PEEKMWELLK 654 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 249/671 (37%), Positives = 383/671 (57%), Gaps = 12/671 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ ELR + +H Y+ D PEI D EYD+L ELR LE HPE SPTQ+V Sbjct: 2 DIKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKV 61 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G +++H++P++SL +VF +E +F +++ + + E K+DGL V Sbjct: 62 GGTVKRELRKVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYP---KFVVEKKIDGLTVV 118 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y NG L A TRGDG+ GE + N+ +++IP + + LE+RGE+++ F Sbjct: 119 LRYYNGELKEAITRGDGSIGESVFENILQVKSIPKHIPSKL--NYLEIRGEIYMTNENFI 176 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K+NE GGK+F NPRN AAG++RQLD I R L F + + + EG + +TH Sbjct: 177 KVNEKQEEIGGKIFKNPRNLAAGTIRQLDTSIVKDRNLDIFIFNLEISEGKK-FETHSET 235 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L G VS +CE+A+EV +EE R LG+ IDG V+KV++L + LG Sbjct: 236 LEWLSNQGFDVSPNFKICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISLGM 295 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ P+W VAFK+P +++ T + D+ QV RTG + P+A L PV +A +S ATLHN D Sbjct: 296 TSKVPKWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHNQD 355 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 I+ +RIGD V+I++AGD+IP+++ + +RP+ ++ + P CPVC S R Sbjct: 356 FIDSKDIRIGDTVIIQKAGDIIPEIIRSIPEKRPDWAKKYIIPDVCPVCNSKTIREPDGV 415 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AG 480 RC+ C AQ + +FVS+ AM++ G G ++ L++ Y+ +D++ L Sbjct: 416 DTRCSNP-DCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKISDIYILKNYKD 474 Query: 481 KLTGLERMG-PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L +G KS N++NA+E +K+ R + LGIR VG+ +A LA F +++ L Sbjct: 475 ALIEKGIIGKEKSVNNLLNAIELSKDNDIDRLITGLGIRNVGKQSAKILAGNFKSMDELA 534 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A+ E+L ++ D G + FF + +I +L GV ++ID+ F Sbjct: 535 GAAYEQLIELEDFGPTTVPDILEFFNSNAYIELIKKLKEAGV--NTISKTLQKKIDNRFL 592 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 GKT V+TG+L M RD+A + G KV+GSVSK+T V+AGE AGSKL KAQ+LGI + Sbjct: 593 GKTFVITGTLPTMKRDEAAEIIQSFGGKVSGSVSKRTSFVLAGEEAGSKLTKAQQLGISI 652 Query: 660 IDEAEMLRLLG 670 I E ++ ++ Sbjct: 653 ITEEDLKDMIK 663 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 312/781 (39%), Positives = 416/781 (53%), Gaps = 117/781 (14%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L L + H Y+ DAP+I DAEYD L + +E K PEL++ DSPTQ+V Sbjct: 19 KAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDSPTQKV 78 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGLA 120 GAAP F++++H VPMLSL N F ++ F RV+ LK + + E K+DGL+ Sbjct: 79 GAAPARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKIDGLS 138 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YE+G LV AATRGDG TGED+T+NVRTI+ IP L PA E+RGEV++ ++ Sbjct: 139 LSLRYEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVYMLKSD 198 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F +N+ G FANPRN+AAGSLRQ D ITA RPL FF Y G T Sbjct: 199 FLALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEFSDL-PEATQY 257 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 G L K+ G V+ +TLC+S ++ LAFY K+ E+R TL +DIDGVV KV+ L QE+L Sbjct: 258 GMLGWLKRAGFTVNPLITLCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLDWQERL 317 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 GF RAPRWA+A KF A++ T + +E QVGRTGA+TPVARL PV V GV+V NATLHN Sbjct: 318 GFAGRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQNATLHN 377 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE- 419 D I+ L + IGD VV++RAGDVIPQ+V+VV +RPED FP CP CGS R E Sbjct: 378 EDYIKSLDIHIGDTVVVQRAGDVIPQIVSVVRDKRPEDAEPYEFPKFCPACGSHAVRDED 437 Query: 420 -GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL- 477 GEAV RCTGGLIC AQ E L+HFVSR A D+ G G+ ++ L E+ V PAD+F L Sbjct: 438 EGEAVRRCTGGLICPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPADIFALH 497 Query: 478 ------------TAGKLTGL--ERMGPKS-------------AQNVVNALEKAKE----- 505 L E+ G K +N++ A++ + Sbjct: 498 SKVDELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDARRTVAFNR 557 Query: 506 --------------------------------------TTFARFLYALGIREVGEATAAG 527 +L +R +GE T Sbjct: 558 FIFGLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGPAWLDLKNVRYIGEITLER 617 Query: 528 LAA--------------------------YFGTLEALEAA-----------SIEELQKVP 550 L ++G E + A + ++L Sbjct: 618 LLEIQGGADTNEERQGFQPDARQRASLLSHYGNEEKIAGALQAARSEAPGPAFQQLANDS 677 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 ++G V + +FF E +NR V++ L + A SP +GK VV TG+L Sbjct: 678 EIGEVATQSLIDFFEETNNRQVVTAL----MDQVQVERPAAASAKSPISGKIVVFTGALE 733 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + +RD+AKA LGAKVA SVS KTDLV+AG +AGSKL AQ+ G++V+ E E + G Sbjct: 734 RTTRDEAKAIAERLGAKVASSVSSKTDLVVAGPSAGSKLRDAQKFGVKVLTEEEWAEISG 793 Query: 671 S 671 + Sbjct: 794 N 794 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 259/673 (38%), Positives = 383/673 (56%), Gaps = 10/673 (1%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ +LR T+ H Y++ +AP I DA+YD LM+ L LE +HPE P SP+ RVG Sbjct: 9 EIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSPSLRVGRDR 68 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 AF Q+ HE PMLSL N ++ + KR D L + V W E+K DG ++S++YE Sbjct: 69 NDAFVQVAHEQPMLSLSNTYNYDEIAEICKRT-DTLLATDDVPWVAEMKYDGSSISLIYE 127 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH-----GENIPARLEVRGEVFLPQAGF 181 GVL A TRGDGT G+D+T NVRTI+++PL+LH + R+EVRGEV LP F Sbjct: 128 EGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRGEVLLPFKEF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-ELPDTHL 240 E++N + FANPRNAAAG+L+ L+ RI A+R L CY + L+ LPD++ Sbjct: 188 ERLNGERTAESEAPFANPRNAAAGTLKTLNSRIVAQRRLLCICYYLYALDDETRLPDSYY 247 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 R+ ++ G + + + + R L + DG+V+KV+SL QQ L Sbjct: 248 ERMKLLEEMGFDTGVAPFKSSDLSALYHYIDEWDVQRGDLPYATDGIVLKVDSLTQQRVL 307 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A++PRWA A+K+ + + V++QVGR+G +TPVA +EPV ++G +V ATLHN Sbjct: 308 GNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVANVEPVLISGTVVRRATLHN 367 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 + I+ L L D V I + G++IP++ V S R + V P CP CG+ +++++G Sbjct: 368 EEFIKSLDLHYHDYVYIEKGGEIIPKITAVEPSLRRPEAEPVRLPERCPACGAPLQQIDG 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C C Q ++H+ +RRA D+ +G + ID L ++ + DL+KLTA Sbjct: 428 SVGYYCVNSYACPPQIMGRIEHYCTRRAADI-NVGPETIDALFDRHLIENIDDLYKLTAS 486 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L KS N++ ++E++K FAR LY +GIR VGE TA LA +F +++ L Sbjct: 487 DLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFVGEGTAKTLARHFQSIDRLAQ 546 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA-PIVINAEEIDSPFA 599 A+ ELQ +PDVG +A V FF+ E N+ +I+EL GV + Sbjct: 547 ATAYELQALPDVGPKIAEQVVYFFSLERNQQLIAELQRCGVRLEECAEEATDMPQSNRLE 606 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIE 658 G+ +V++GS +Q SRD+ K + + G GS+S +T V+ G G SK AKA++LGI Sbjct: 607 GERIVISGSFTQHSRDEYKQLIEQHGGTNVGSISSRTTFVLMGSDMGPSKRAKAEQLGIP 666 Query: 659 VIDEAEMLRLLGS 671 ++ E E L L S Sbjct: 667 LVTEEEFLARLNS 679 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 258/670 (38%), Positives = 388/670 (57%), Gaps = 17/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + TL+ Y Y+V+D P + D EYD+L E+ E E KHP+ I P SPTQ Sbjct: 1 MIKDYNDYKKAVDTLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG L F + +H M S+++VF+E+ FL + RV+ L +E ++ E K DG + Sbjct: 61 RVGDVVLEGFEKAKHLSRMWSMEDVFNEKDFLDWVGRVKRILG-HENFSFYIEPKFDGAS 119 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++++YENG L+ A TRGDG GED+T N +TI +IPL++ + +E+RGEV + + Sbjct: 120 LNLIYENGKLIRAETRGDGEIGEDVTLNAKTINSIPLEIKE---KSLIEIRGEVVIKKDD 176 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+K+NE+ + G FANPRNAAAGSLRQLDP+ITAKRPL F+ +GVGV + + Sbjct: 177 FDKLNEERLKNGEPTFANPRNAAAGSLRQLDPKITAKRPLIFYPWGVGVNSLN--YERYS 234 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + G + +C+ V Y + + R + +DG+V+K++ + + L Sbjct: 235 ELMDYIYSLGFKEPPKRGVCKDIPCVEKKYDEFVKLRDSFEVMLDGMVVKIDEIKYHDIL 294 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ + PRW VA+KFPA E+ T + DV QVGRTG +TPVA L+PV + GV+V ATLHN Sbjct: 295 GYTQKYPRWMVAYKFPAIEKETIIEDVIVQVGRTGVLTPVAVLKPVEIGGVIVERATLHN 354 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 DEIER+ +RIGD V++ R+GDVIP++ V+ +R D + + PTHCPVCG++V ++ Sbjct: 355 FDEIERMDIRIGDHVIVIRSGDVIPKITKVLTWKRKGDEKPIPRPTHCPVCGAEV--LDE 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 A+ +C L C A+ ++ +F S+ +D++G+G+ + L E V DLF+L Sbjct: 413 GALIKCQN-LSCPARVVNTIIYFASKNCLDIEGLGESVAKLLYEHGLVKDVTDLFELKVE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L K A+N+VNA++ RF+ ALGI +GE + + FG Sbjct: 472 DLEKLPLFARKKAENLVNAIKSKVGVECWRFVNALGIEHIGEVASKKICEKFGV--EFYK 529 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 + EE +++ G + + + ++ E +PF G Sbjct: 530 HAPEEFEEIEGFGPEMVKSIAEYIRVNKE-----KIEKLIEILKPKNPEKKEVQKTPFTG 584 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG++S+ R + K L ++GAKV+ SVSKKTD VI GE AGSK KA++LG+ ++ Sbjct: 585 KTVVLTGTMSK-PRSEIKKMLEDMGAKVSSSVSKKTDFVIYGEDAGSKYDKAKKLGVNLL 643 Query: 661 DEAEMLRLLG 670 E +M ++L Sbjct: 644 SEDDMWKMLK 653 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 255/666 (38%), Positives = 377/666 (56%), Gaps = 22/666 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 +++ E TL Y+ DAP D EYD L ++ E E +P I+ SPT+RVG Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F + RH V M S++++F E LA+ KR + E + + + K DG ++++L Sbjct: 63 EVSDGFVKARHSVRMWSMEDIFSFEELLAWLKR-----GDKEGLEFALQPKFDGASLNLL 117 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG LV A TRGDG TGED+TSN + I+ IPL++ R+E+RGEV + + F++I Sbjct: 118 YENGALVRAITRGDGITGEDVTSNAKVIKNIPLQIAYN---GRIEIRGEVVIAKNDFDEI 174 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G +NPRNAAAGSLRQLD +TA R L F +G G E +T+ + Sbjct: 175 NFARAQRGEPQLSNPRNAAAGSLRQLDSAVTASRRLRFKPWGYG--EQNLGLETYSQMMD 232 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 G + +C +AE++ Y ++ R + F +DG+V++V S+A E+LG+ Sbjct: 233 FIYSQGFEREEFFKICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTE 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + P++ VA+KFPA E+ T + DV FQVGR+G +TPV LEPV++ G V +ATLHN DEI Sbjct: 293 KFPKFMVAYKFPAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEI 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ERLG++ GD + I R+GDVIP++ V R + P CPVCGS + ++ Sbjct: 353 ERLGVQKGDFISIIRSGDVIPKITGVFKQRRDGSQMPIERPRECPVCGSML--LDEGVFV 410 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ SL HF S++ +++DG+G+ I++QL E V AD+++LTA L Sbjct: 411 KCQN-LECKARVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLAS 469 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE K N++ A+E ++ F+ +LGI +GE A +A + + S Sbjct: 470 LEGFKDKKIANLLGAIEASRTPALHSFIASLGIEHIGEVAAKKIAQIYP--QNWRELSFG 527 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 E+ + G +A F L E + + +P E S +GKT V Sbjct: 528 EVAAIEGFGEAMAESYAEFMQVNRQ------NLDEILRFVSPQAQIYETKQSAISGKTFV 581 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 +TG+LS+ SRD+ K L GAKV+GSVSKKTD V+ G+ AGSKL KA+ELG++ I E E Sbjct: 582 ITGTLSK-SRDEFKRVLEANGAKVSGSVSKKTDFVLYGDEAGSKLDKARELGVKAITEDE 640 Query: 665 MLRLLG 670 + R++ Sbjct: 641 LRRMIE 646 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 299/671 (44%), Positives = 449/671 (66%), Gaps = 2/671 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M S + ++ +LR L +EY YH ++ I DAEYD L R+L ELE K+ ELI DSPTQ Sbjct: 1 MTSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG+ L F +I+H PMLSL+N FD +L F KR++ + NNE +++CCELKLDG+A Sbjct: 61 KVGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVA 120 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +SI+YE G+ V AATRGDG GE+ITSN R I +IPLKL G +IP RLE+RGEVF+ ++ Sbjct: 121 ISIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSN 180 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV-GVLEGGELPDTH 239 F K+N+ + K F+NPRNAAAGSLR +DP ITA+R L F C+G ++ + TH Sbjct: 181 FIKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTH 240 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL++ WG+PV+ + +C S E++ FY K+ + R L FDIDG+VIKVNSL Q++ Sbjct: 241 YQRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKK 300 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 +G ++PRWA+AFKF +E++T + DV+FQVGRTG ITPVA PV+++GV++S A+LH Sbjct: 301 IGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASLH 360 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EIERL L D + I R+GDVIP+++NV+ R ++ ++++FP+ CPVC +++ Sbjct: 361 NKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLENI 420 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E + RC GL C AQ+K++L HF S++++ V G+G KII++LVEK V P D F L Sbjct: 421 EEKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYLKD 480 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L L+ +G + + ++N+++K K+TT F+YALGI VGE A +A YF L+ L Sbjct: 481 IDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLM 540 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF- 598 ++I EL + VG ++++++ N+F+ SNR ++ +L+ + + I+ + + Sbjct: 541 NSNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQAGIFLNDQEIHKINSEKTYF 600 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 K +VLTG SR + K L+ LGAK++ ++S+KTD +I G GSK +A++L ++ Sbjct: 601 FNKKIVLTGVFKSFSRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSKFFRAKDLDVK 660 Query: 659 VIDEAEMLRLL 669 +I++ E+ L+ Sbjct: 661 IINQEELNSLI 671 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 236/672 (35%), Positives = 384/672 (57%), Gaps = 12/672 (1%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I+Q++ L L Y Y+ + P++ D +YD L++EL LE +P+ P SPT + Sbjct: 5 DPIKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYPQFKLPYSPTLK 64 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G FS I+H+ PM+SL NVF+ E AF R+ ++ + ELK+DG+A+ Sbjct: 65 IGGFVEKKFSTIKHKTPMMSLANVFNIEELKAFYDRIVKKI---PTFSLLTELKIDGVAI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y+ G+LV A TRG+G GED+T N +TI+ IPL+L+ + LEVRGE++L F Sbjct: 122 SLKYQKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNEDL---DLEVRGEIYLSHPDF 178 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EK+N ++ +F+NPRNAA+G+LRQL+ + AKR L+ F YG+ + T Sbjct: 179 EKLNAQRKQENKPLFSNPRNAASGTLRQLNSAVVAKRNLSIFVYGI--ADPYLTKPTQKE 236 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L+ G + + E +L+ K + + L +D DG+VIK+N L +G Sbjct: 237 TLVFLTALGFATNPHHYFVSNFENLLSVIEKYKSIKEQLTYDTDGIVIKINELVFHSLIG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 A+APRWA A+KF + ++++ FQVGRTG ITPV + PV V G LVS LHN Sbjct: 297 ATAKAPRWATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMVDGSLVSKVFLHNY 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I + +RI D V++ +AG VIP+++ V+ S+R + + + CP C + +E+ G Sbjct: 357 DYICKKDIRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKCPSCKTILEKQPGG 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 C C Q+ + L HFVS+ AMD++ +G++ I +K + P+DL+ L + Sbjct: 417 IDYFCLNP-NCREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLITKPSDLYLLKNHQ 475 Query: 482 --LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 L + G K N+++A+E +K+ F L+ALGI+ +G+ + LA YF T+E L+ Sbjct: 476 HILQEISGFGAKKITNILDAIEASKQKGFEDVLFALGIKHIGKKVSQVLAKYFQTIENLQ 535 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 ++ + + ++ ++GI +A + +F+ N +++L GV + + + F Sbjct: 536 QSTSDTITQIREIGIKIAQSIQQYFSNSCNLEEVTKLKKLGVSFQSTNSQKPTTQNI-FT 594 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 K +VLTG+L + SR + L ++GA + S+S KT+ +I G AGSKL KAQ+L I + Sbjct: 595 NKKIVLTGTLQKYSRLQIQQILEQMGAIITNSLSLKTNYLIVGINAGSKLTKAQKLQIPI 654 Query: 660 IDEAEMLRLLGS 671 I+E E+ +++ + Sbjct: 655 IEEKELQQIIEN 666 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 293/679 (43%), Positives = 394/679 (58%), Gaps = 28/679 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L EL L + Y+ DAP + DA YD L RE L HP+L +V Sbjct: 13 DPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAA---LDQV 69 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAV 121 GAAP AF ++RH +PMLSLDNVF+ F+ F ++ L + + E K+DGL++ Sbjct: 70 GAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSI 129 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ YEN V ATRGDGT GED+T N+RT+R +P L ++ P +E+RGEV++ + F Sbjct: 130 SLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLP-DDAPDFIEIRGEVYMTKTDF 188 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N+ R FANPRNAAAGSLRQLDP +TA R L+ F Y G +TH Sbjct: 189 ITLNQGQARQ----FANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVG-ETHWD 243 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L ++WG PV+ S F + E R L +DIDGVV K++ LA QE+LG Sbjct: 244 YLAILRRWGFPVNPLAERV-SEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLG 302 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 F RAPRWAVA+KFPA+ +T + ++ QVGRTGA+TP ARL+PV+V GVLVS+ATLHN Sbjct: 303 FAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNE 362 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 DEI R +RIGD V ++RAGDVIPQ++ + RP D+ VFP HCPVCG+ R GE Sbjct: 363 DEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGE 422 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TA 479 V RCTGGL C AQ E L HF SR A D++GMG+K + + ++ +PAD+F L Sbjct: 423 VVRRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDRE 482 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + LE G SA+ ++ A++ + + ARF+YALGIR +GE A LA ++ + Sbjct: 483 AAIAALEGWGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWR 542 Query: 540 AASIE----------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 E EL + +G +A + FFAE NR+++ L+ Sbjct: 543 RQMEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLVPMLTIEDEVAAA 602 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 KT+V TG+L ++R +AKAR LGA+V SVSKKTD V+ G AGSK Sbjct: 603 GGALAG-----KTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKA 657 Query: 650 AKAQELGIEVIDEAEMLRL 668 AKA LG+ V+ EAE L Sbjct: 658 AKAASLGVTVLSEAEFRSL 676 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 241/668 (36%), Positives = 397/668 (59%), Gaps = 10/668 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +LR L + Y+ + I D E+D L++EL LE K+P+ SPT VGA+ Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEISSPTTSVGAS 88 Query: 66 PLA-AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F ++ H PMLSL N ++ + F +R++ ++ +++ +C E+KLDGL++S+ Sbjct: 89 LKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSISLT 148 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV A TRGDG GED+T N+ I +I L +E+RGEV LP A FEK+ Sbjct: 149 YRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQA---IDMEIRGEVVLPLASFEKL 205 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G ++FANPRNAA+G+LRQLD +I R L + Y + + L +H + Sbjct: 206 NNERLEKGEELFANPRNAASGTLRQLDSKIVKDRGLDAYFYFLVEADKLGL-KSHSESIK 264 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + G+ + L E+++++ + E++R +L ++ DG+VIKV+ + +++G+ + Sbjct: 265 FLESMGIKTTGIFELLETSKDIEKRINYWEKERESLPYETDGLVIKVDEINLWDEIGYTS 324 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PRWA+A+KFPA + T + DV +QVGRTG +TPVA L+ V ++G V A+LHN EI Sbjct: 325 KTPRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNISEI 384 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R +RIGD+V I +A ++IPQVV + ER + + + PT CP+C +ER EG Sbjct: 385 QRKDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGLVDI 444 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKL 482 +C C A+ + +++FVSR A+++ G+G KI+++ ++ Y+ T D+F L L Sbjct: 445 KCIN-EECPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNHREAL 503 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 +++MG KS +N++N++E++K + + LYALGI E+G+ T+ LA ++ L A + Sbjct: 504 ENIDKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKILAKASKNIDKLMAMT 563 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP-APIVINAEEIDSPFAGK 601 E+L + +G + A+ + FF +E N+ +I L +G+ + + + ++ F GK Sbjct: 564 FEDLTSIEGIGEIAANEIIAFFTKEKNQKIIQGLKEKGLKFEIKESEASVQNVNPNFVGK 623 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL-GIEVI 660 + TG+L +R+ K + +LG K SVSK D +I GE AGSKL KAQE+ I+++ Sbjct: 624 NFLFTGTLKHFTREQIKEEIEKLGGKNLSSVSKNLDYLIVGEKAGSKLKKAQEIPTIKIL 683 Query: 661 DEAEMLRL 668 E E + L Sbjct: 684 TEEEFIEL 691 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 267/684 (39%), Positives = 386/684 (56%), Gaps = 29/684 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++L +L L+ H+ LYH DAPEI DA+YD L++E REL K PEL + Sbjct: 4 NDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDYEGV 63 Query: 62 VGA-APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWC--CELKLDG 118 +GA A +I H PMLSL+N F + F RV+ L + +V+ CE K+DG Sbjct: 64 IGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPKIDG 123 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQ 178 L+ + LYE G L+ ATRG+G GEDIT+ + IR +P K+ N P LEVRGE+++ Sbjct: 124 LSFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKI--ANAPEVLEVRGEIYMHH 181 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 + FEK+ + FANPRNAAAGS+RQL+P+I +R L + Y + + Sbjct: 182 SDFEKLKDVCN------FANPRNAAAGSIRQLNPKIAEERNLRYVAYCIVNSALA----S 231 Query: 239 HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L Q +WG V ++ ++ L+F+ ++ R TLG+DIDG+V KVN Q+ Sbjct: 232 QEAILKQLAEWGFCTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQK 291 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG ++ PRWA A KFP+ E +T +RD+ QVGRTG ITP+A LEP+++ G LVS A+L Sbjct: 292 LLGSTSKYPRWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASL 351 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE--VVFPTHCPVCGSDVE 416 HN +EI R +RIGD V+++RAG+VIPQVV V + R VFP+HCP CGS + Sbjct: 352 HNLNEIARKDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFPSHCPSCGSTLS 411 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 R GE RCT L C AQ E +KHFVSR +++ G+G+K I+ Y+ AD+F Sbjct: 412 RAPGEVAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFS 471 Query: 477 LTAGK----LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 L L+ G KS ++NA+ + + F++ALGIR +G+ A +A ++ Sbjct: 472 LREKISHMNLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHY 531 Query: 533 GTLEALEAASI-----EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 + A A E+ + +G+ + FF+ E N V+ L + Sbjct: 532 RSYSAWVRAMTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEKLNILNEIA 591 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS 647 P +GKT+V TG L MSR++A LGAKV +V+ KTD+++AG +GS Sbjct: 592 NTETAS---PISGKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGS 648 Query: 648 KLAKAQELGIEVIDEAEMLRLLGS 671 KL A++LGI+V++E+E LL + Sbjct: 649 KLDTARKLGIQVMNESEWKDLLKT 672 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 249/674 (36%), Positives = 381/674 (56%), Gaps = 13/674 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ EL+ L Y Y+V+D P +PD YD+ MREL ELE +P+ T +SP+ Sbjct: 1 MDRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSV 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG F++++H+ PMLSL N FD F++ Q+ + + + E K+DGL+ Sbjct: 61 RVGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQDNQNA--SVDLKGYVVEPKIDGLS 118 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +SI+Y+N L A TRGDG GED+TSN+ TI+ IP + + +EVRGEV++ Sbjct: 119 ISIIYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMAFHD 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F ++N++ + K FANPRNAAAG+LR LD I A+R L+ F Y + + TH Sbjct: 179 FYEMNDNLEESDKK-FANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQEL-GIKTHY 236 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + K VSD + ++ +EV+ + + R L + IDG+VIK+N+L +++ Sbjct: 237 ESIQFLKDNKFKVSDLIVKVDTIDEVINQIDRYTKVRNDLSYMIDGIVIKINNLEVYDEI 296 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++ P+WA+A+KFPA + + ++ VGRTG I+ VA+++P+ + G +V ATLHN Sbjct: 297 GYTSKFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYATLHN 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ +RI D++ I +AGDVIP V V LS+R ++ T+CP C S + R Sbjct: 357 FDFIKEKDIRINDEIKIYKAGDVIPYVDGVDLSKRLANSVPYESITNCPSCQSVLVREND 416 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 E RC C E + +FVSR M+++GM D II++ + + ADL+ L Sbjct: 417 EVDQRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYYLQKH 476 Query: 481 K---LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K L ++ KS N++N++ +K + L A GIR VG A LA F T+ Sbjct: 477 KEFILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGIRHVGPNLAKKLAKQFKTMTT 536 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE---EI 594 L A+ EL V G A + N+F ++ N +++++L GV+ + I Sbjct: 537 LMHANFGELTNVDACGEKAALSLINWFNDDHNVSLVNQLQQVGVNMEYIDDFIYDDNINI 596 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 + KT V+TGS S +SRD+ K L + AKV SVSKKTD V+AG AG+KL KA+ Sbjct: 597 IDEYKNKTFVITGSFS-ISRDEIKTILEKYYHAKVKNSVSKKTDYVLAGIEAGTKLEKAK 655 Query: 654 ELGIEVIDEAEMLR 667 LG+++I E E + Sbjct: 656 LLGVKII-ENEFWK 668 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 249/671 (37%), Positives = 379/671 (56%), Gaps = 18/671 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + + L L + Y+ MD P DAEYDRL EL ++E HPE SP+ Sbjct: 1 MFDLRARYLHLVGELTMLNHHYYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSN 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG L F + H +P+ SL+ + F + V+ T+ E K+DGLA Sbjct: 61 RVGGEVLDKFEKKEHTMPLYSLEKSQTYDGVRKFVEDVKRE---FPNATFTIEQKMDGLA 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + Y G TRG G GE ++ ++TIR+IPL + + +E RGEVF+P +G Sbjct: 118 NVLRYSGGSFSEGRTRGTGKIGEIVSEQIKTIRSIPLNIRFQ---GVIEPRGEVFMPISG 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE N G NPRN AAG+LR LDPRI A RPL F Y + EG +T Sbjct: 175 FEAYNASLPE-GEAPLKNPRNGAAGALRNLDPRIAASRPLDAFWYDIAYSEGIT-FETQA 232 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 + ++ G ++ + +S + ++ +++E RPTL +DIDG+VIKVN L +E+L Sbjct: 233 EMMTFLQEQGFKINPYFYVTDSIDVIIEKLEEMKEVRPTLNWDIDGMVIKVNELHIREEL 292 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++ P+WA+A+KF A E+ T + V ++VGRTG +TP+A LEPV + G V+ ATL+N Sbjct: 293 GYTSKFPKWAIAYKFEAVEETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNN 352 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D+I R G+++G +V +RR+ DVIP+++ +V + E+V PTHCP C + + + Sbjct: 353 YDDILRKGVKVGAEVFVRRSNDVIPEIMGIVEGS---EGTEIVPPTHCPECETVLVQ--D 407 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH-TPADLFKLTA 479 A RC C AQ HF SR AM++D +K +QL E + + DL++L Sbjct: 408 GAHLRCMNIDSCSAQSVGKFTHFASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDR 467 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L L+R G + A ++ A+E++K T F+YALG+R G+ TA L Y+ ++ + Sbjct: 468 NELLKLDRFGERKADRLLAAIEESKSRTLEAFIYALGMRHSGKGTAERLLRYYNNIDDIA 527 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 AS+E+L ++ D+G VA + ++F E N +I EL A G+ + A + Sbjct: 528 NASVEDLMRIEDIGSAVAQSIFDYFHNERNLQMIEELKALGLTL---THVAAVSSGNQLE 584 Query: 600 GKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEV 659 G T V+TG +S+ R + +A + E G K +GS+SK T+ ++AGEAAGSKLAKAQ LG+ V Sbjct: 585 GNTFVITGKVSR-PRKEIEAFIKEHGGKASGSISKNTNYLVAGEAAGSKLAKAQSLGVTV 643 Query: 660 IDEAEMLRLLG 670 I E ++ +++ Sbjct: 644 ITEEQLYKMVN 654 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 717 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 256/687 (37%), Positives = 389/687 (56%), Gaps = 24/687 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ + L L+ ++ Y+ + P + DA+YD L ++ K P L + +++ Sbjct: 17 DHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDHSKK 76 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG P A FS++ H PMLSL N F E F ++Q+ LK + CE K+DGL+ Sbjct: 77 VGFTPSAQFSKVVHLKPMLSLANGFCVEDISNFITKIQNFLKIDHCPKIVCEYKIDGLSF 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + YE GVL A+TRGDG GE+IT N++TI++ P L + EVRGE+++ F Sbjct: 137 NARYEYGVLTLASTRGDGQIGENITENLKTIQSFPQTLPITD--KVFEVRGEIYITNNDF 194 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N ++ G +F+NPRNAAAGS+RQLDP ITA+RPL +F Y +G + T Sbjct: 195 RVLNIQQQKLGKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFASTQFE 254 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + + V+ L ++ ++ FY+ V +R L F+IDGVV KVN A QE+LG Sbjct: 255 LLQKLSQLKFSVNTDYILSDNLHSMIEFYNNVATERNNLAFEIDGVVYKVNDFALQERLG 314 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR+A+A+KFPA T + ++ QVG+TGA+TPVA L P+++AGV +S ATLHN Sbjct: 315 ATSTSPRFAIAYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVTISRATLHNK 374 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE-VVFPTHCPVCGSDVERVEG 420 EIE +RIGD V + RAGDVIP++ V LS R + E +FPT CP C ++ EG Sbjct: 375 QEIESKDIRIGDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSCNQNLVVNEG 434 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 E VARC L C AQ E + HFVS+ A+++DG+G + I L++ +Y+ D+F L Sbjct: 435 ETVARCGNSLACQAQIYERICHFVSKDALNIDGLGKQRIQFLLDNKYIVNIVDIFLLEEN 494 Query: 480 ------GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 KL + G KS + + +AK +F+YAL I+ VG+ +A LA F Sbjct: 495 NKFLYSNKLEDIAGWGIKSVNKLFQNINQAKNVILDKFIYALAIKHVGKYSAKLLAKEFK 554 Query: 534 TLEALEAASI----------EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 T + S+ E+L+ + VG+ A + FF +N N+I++L+ Sbjct: 555 TAKNFINQSLKLANNATEIYEKLRNIEGVGVKTADQLKQFFMVSANVNLITKLVNILTIQ 614 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + + +T+V TG+ + +SR + K + +LGAKV VS TDL++ G Sbjct: 615 DWQYH----GDNLLLSNQTIVFTGTFATVSRSEIKVQAEKLGAKVGTQVSNNTDLLVVGN 670 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AG+KL KAQ+LGI++I+E E ++++ Sbjct: 671 KAGNKLQKAQQLGIKIINEEEWIKMVN 697 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 273/670 (40%), Positives = 393/670 (58%), Gaps = 16/670 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q T+LR +R H+Y Y++ +P I D YD L L+ LE L T SPT+R Sbjct: 72 EAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIF-NLDTEASPTRR 130 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG PL + H MLS+D +S F++RV+D + + + CE K DGL+V Sbjct: 131 VGGEPLDELETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVG---DLEYICEPKFDGLSV 187 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE+G + AATRGDG G+D+T+ V T+ A+PLKLHG + P+ L VRGEV++P+AGF Sbjct: 188 EVIYEDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHG-DYPSYLAVRGEVYMPKAGF 246 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + N + K FANPRNAAAG+LRQLDP + A+RPL+ F Y + L+ ELP Sbjct: 247 REYNRERIECDEKPFANPRNAAAGTLRQLDPGVVAERPLSCFFYDI--LDATELPPDQWT 304 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + WGL +DR++ +S ++ +A+ +++ R L ++IDG VIKVN +E LG Sbjct: 305 TLNDLQSWGLRTNDRISRVDSIDDAIAYRDQLKAARAELNYEIDGTVIKVNDRGNREILG 364 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +R+ RWA A+KFP + ++T + D+ QVGRTG +TPVA L+PV V GV VS A+LHN Sbjct: 365 ATSRSVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNP 424 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 +EI+RL + GD+V +RRAGDVIP+V V FP CP+C S VE+ Sbjct: 425 EEIKRLSVNSGDEVRVRRAGDVIPEVAEVTQKRATGT---FNFPNQCPICHSSVEQ--DG 479 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 +A CTGGL C AQ ++ H+ SR A+D+DG+G++ ++QLVE + ADL+ L+ Sbjct: 480 PLAFCTGGLTCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVAD 539 Query: 482 LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L+ L+ G SA+N++ A+ + + + FL LGI EVG A LA F +A+ A Sbjct: 540 LSKLDGWGTTSAENLIQAISETQTPSLTDFLVGLGIPEVGPTIARNLAGTFDNFDAIIDA 599 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGK 601 L+++ D+G V++H+ FF E NR I LL+ GV + ++P + Sbjct: 600 DEAALREIEDIGPTVSTHISEFFTNEQNRAAIDNLLSAGVTPQ--TQQSTATTNAPLSDL 657 Query: 602 TVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVI 660 T V TGSLS + R A + G GSVS TD ++ G+ GS K A+ + I Sbjct: 658 TFVFTGSLS-VPRTTATTYIERHGGNATGSVSSNTDYLVIGDNPGSTKRIDAERNDVPEI 716 Query: 661 DEAEMLRLLG 670 DE E LL Sbjct: 717 DETEFTELLA 726 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 276/742 (37%), Positives = 379/742 (51%), Gaps = 73/742 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E+ ++ LRT + H Y+ DA + DAEYD L+ EL LE HP L + DSPTQ Sbjct: 23 LEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLRSQDSPTQ 82 Query: 61 RVGAAPLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VG F+ + H MLSLDNVF EE + +V+ + +V + ELK+DGL Sbjct: 83 TVGGRAETTLFAPVTHAERMLSLDNVFSEEELAEWAAKVERDAGS-GRVRYLSELKIDGL 141 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+++ YE+GVLV+AATRGDG GED+T NV T+ +P +L G P +EVRGE+F P A Sbjct: 142 AINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPPLVEVRGEIFFPVA 201 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR---------PLTFFCYGVGVL 230 F+++N G +VFANPRNAAAGSLRQ + + R L +G+G Sbjct: 202 EFDELNARQLEVGERVFANPRNAAAGSLRQKEEGKSPARLELMRARIRRLRMLVHGIGAW 261 Query: 231 EGGELPDT-----HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDID 285 EL WGLP+S + + EV F + R + ID Sbjct: 262 PVRELASDAHVSAQSEVYGLLAGWGLPISTHFRVFDDISEVTEFVRRHGAHRAEVEHQID 321 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 G+V+KV+ L E+LG +RAPRWA A+K+P +E T + D+ VGRTG TP A +E Sbjct: 322 GIVVKVDDLGLHEELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRATPFAVMEK 381 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V VAG V ATLHN ++ G+ IGD VV+R+AGDVIP+V+ V+ R RE V P Sbjct: 382 VEVAGSEVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFVMP 441 Query: 406 THCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 T CP C + + EG+ RC C AQ + ++H SR A+D++G+G+ L + Sbjct: 442 TLCPECQTPLRPAKEGDIDLRCPNARSCPAQVRGRVEHVASRGALDIEGLGEVAAAALTQ 501 Query: 465 K-----EYVHTPADLFKLTAGKLTGL---------------ERMGP-------------- 490 + T A LF+LT L + E+ G Sbjct: 502 PLEPEDPPLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTPFRRRRAPK 561 Query: 491 -------------------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 KSA+ ++ L+KAK R L AL IR VG A LA + Sbjct: 562 RDGVFDPAAPWGDEDSVPSKSAEVLLENLDKAKTQDLWRILVALSIRHVGPVAARALAGW 621 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP---APIV 588 FG+L+A+ +AS EEL V VG ++A + ++F + +R ++ GV P Sbjct: 622 FGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWHREIVDRWRKAGVVMEVPGHPGP 681 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 A AG TVV TGSL +R+ A ++ G K SVSKKT V AG AGSK Sbjct: 682 GAAAAAGGVLAGLTVVATGSLEGYTREGALEAIMAAGGKAGSSVSKKTHYVAAGPGAGSK 741 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 L KA+ LG+ +ID AE L+ Sbjct: 742 LGKAEALGVRIIDAAEFRLLVE 763 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 707 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 238/689 (34%), Positives = 389/689 (56%), Gaps = 34/689 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I ++ LR L + Y Y+ ++ P + D EYD ++EL +LET++PE +P+SP+++ Sbjct: 20 KEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPSKK 79 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG F++++HE+PM+SL N FDEE L F+ ++ + +++ ++ E K+DGL++ Sbjct: 80 VGGYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSD-FSYVVEPKIDGLSI 138 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y++G L+ A TRGDG GED+T N++TI+++PL + LE+RGEVFL + F Sbjct: 139 SVKYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNI---EYDKDLEIRGEVFLTKKDF 195 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 EKIN D T K FAN RNAA+GSLR LD ITAKR L+ Y V ++ Sbjct: 196 EKINSDPNLT--KKFANARNAASGSLRNLDSNITAKRNLSALFYYVPKATELKIAK-QYD 252 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K +P+S + C + + V+ ++ + R +DIDG+VIKVN E++G Sbjct: 253 VLSWLDKQLIPISREIRHCNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIG 312 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + ++ P+WA+A+KFPA + T + ++ VGRTG I +A L+ + + G V ATLHN Sbjct: 313 YTSKFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNY 372 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I+ + + D V I +AG++IP+++ + +R PT+CP C S + + E E Sbjct: 373 DYIKDHEIMLNDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPEPTNCPSCDSKLVKKEQE 432 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TA 479 C C ++ + +++F SR AM+++G+ II QL + ++ DL++L Sbjct: 433 VDLYCLN-ENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHKK 491 Query: 480 GKLTGLER------------------MGPKSAQNVVNALEKAKETTFARFLYALGIREVG 521 L ++ KS N++ A+EK+K + +FL LGI+ VG Sbjct: 492 EILIATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYVG 551 Query: 522 EATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV 581 A L+ F ++E L A+ EE+++VPD G ++ + N+F++ N++++ G+ Sbjct: 552 LRAAKALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQDLLWRAKKVGI 611 Query: 582 HWPAPIVINAEEIDSPFA---GKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTD 637 ++ N + + KT V+TGS ++ SR++ K + AKV+ SVSKKTD Sbjct: 612 NFNYINEFNDVVVKNEHQKYMNKTFVITGSFNK-SRNEIKNYIESVFNAKVSDSVSKKTD 670 Query: 638 LVIAGEAAG-SKLAKAQELGIEVIDEAEM 665 ++ GE AG SKL KA +L IE+I E Sbjct: 671 YLVVGENAGDSKLKKANDLKIEIITEPFW 699 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 266/679 (39%), Positives = 390/679 (57%), Gaps = 24/679 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M++ +++ EL L + Y Y+V+D P I D EYD EL LE K E+ P SPTQ Sbjct: 1 MDNKLEKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN--------EKVTWCC 112 RVG L FS+ H+ + SLD + E + ++ R ++ ++ + Sbjct: 60 RVGDKILGEFSKYTHKGRLWSLDKAQNMEQLIEWHNRNLKVIEQYNSMSEDKLPELRYIV 119 Query: 113 ELKLDGLAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVR 171 K DGL V+ Y ENG+L+ +ATRG G GEDIT+ ++TI+ +PLK+ +EV Sbjct: 120 TKKFDGLTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNS---YVIEVH 176 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GE + + FE+ N+ A+ N RN AAG+LR LD + TA+R L+ F Y VG E Sbjct: 177 GEAIMTKTAFEEYNKAAQV----PLKNLRNGAAGALRNLDIKETARRNLSAFFYDVGYNE 232 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 G E ++ + + GLP + C + EEV +E R L +DIDG VI V Sbjct: 233 GPE-FKSYREMMNFIRNMGLPQDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGAVIVV 291 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + + +E LG+ + P+WA+A+KF A+E T + DVE+ VGR+G +TP A LEPV + GV Sbjct: 292 DDIKTREILGYTIKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVELGGV 351 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V ATL+N D+I+R +++G KV++RR+ DVIP+++ VV E++ E+ P CP C Sbjct: 352 TVKRATLNNMDDIKRKNVKLGAKVLVRRSNDVIPEIMGVVEES-LEESEEIQAPDRCPYC 410 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 S + + C L C Q +S+ HF SR AM++ G +K +QL EK + + Sbjct: 411 NSHLVQ--NGVHYYCENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLDIKSI 468 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 ADL+K+ +L LE+ K +QN+++A++ +K A F+YALGI VG+ TA L Sbjct: 469 ADLYKIKKEELLTLEKFKDKKSQNLIDAIQNSKNCDLASFIYALGIPNVGKKTANDLVMK 528 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 F TLE+++ +IE+L +VPDVG +VA +++FF +E + I ELL GV Sbjct: 529 FKTLESIKNTTIEQLVEVPDVGEIVAKSIYDFFEDEKIISNIEELLNLGVKPYYEEERID 588 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 E PF KT+V+TGSL+ SR + K +L LGAKV+ SVSK TD V+ GE GSK K Sbjct: 589 EN---PFMDKTIVVTGSLNNYSRGEIKDKLQSLGAKVSSSVSKNTDYVLVGEKPGSKYEK 645 Query: 652 AQELGIEVIDEAEMLRLLG 670 A ELG++VI+E E + Sbjct: 646 AIELGVKVINEEEFSNKIK 664 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 275/785 (35%), Positives = 381/785 (48%), Gaps = 117/785 (14%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVM----DAPEIPDAEYDRLMRELRELETKHPELITPDS 57 ES Q +L + Y+ + DAEYD L +L+ LE +P+L+TPDS Sbjct: 10 ESALAQHADLVDQIEAARTDYYDQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTPDS 69 Query: 58 PTQRVGA----APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCE 113 PTQ VG A F H M S+D+VF A+ RV+ L+ + + E Sbjct: 70 PTQTVGGSGETANTEGFPPHHHLCQMGSIDDVFSYAEVDAWWARVEKSLEGQD-FSVSAE 128 Query: 114 LKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGE 173 +K+DGLA+S+ Y +G L ATRGDG TGED+T NV+TI +P++L GEN+P +E+RGE Sbjct: 129 VKVDGLAMSLTYLHGTLAVGATRGDGFTGEDVTENVKTIATVPVRLSGENVPELVEIRGE 188 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG 233 V+LP A F +N R G K+FANPRNAA GSL+Q DP AKRPL F +GVG + Sbjct: 189 VYLPLADFAAMNAARERDGEKLFANPRNAATGSLKQKDPVQAAKRPLAFLAHGVGKVRWA 248 Query: 234 EL-----PDTHLGRLLQFKKWGLPVSDRV--------TLCESAEEVLAFYHKVEEDRPTL 280 + +T + WGL S E+ ++ R Sbjct: 249 DPGAAAHLETQEDFYELLESWGLHSVRETPASLGLSLAGIHSLAEIHTVLDQMTAHRHDF 308 Query: 281 GFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPV 340 IDGVV+KV+S AQ++ LG ARAPRWA A+KFP +E T + +E QVGRTG +TP Sbjct: 309 AHQIDGVVLKVDSFAQRDALGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPF 368 Query: 341 ARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR 400 +E V V G VS ATLHNA E+ R +R GD VV+R+AGD+IP+++ V+S R Sbjct: 369 GVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEILGPVMSLRTAGLP 428 Query: 401 EVVFPTHCPVCGSDV-ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKII 459 E V P CP CG+++ + EG+ RC C AQ E L H SR A+D++G+G++ Sbjct: 429 EWVMPDTCPSCGTELGAQKEGDIDLRCPNQSGCPAQITERLIHVGSRNALDIEGLGEEGA 488 Query: 460 DQLVEKEY-----------------------------------------------VHTPA 472 L + E+ + + A Sbjct: 489 LALTQPEFGRGDVAAALAAGGHCELEDGTIVAVPSGEPRSLEAIEDLLPPPQSPVLTSEA 548 Query: 473 DLFKLTAGKLTGL------------------------------------ERMGPKSAQNV 496 LF L L + +R GP A V Sbjct: 549 GLFALQPEDLRDVMVWREIPGTGGRDWQQVRFFWAKPRPLPKAAQEATGQRFGPPVAGKV 608 Query: 497 V----NALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 V L+ AK R L AL IR +G A +A F T+ AL AS E+L + + Sbjct: 609 VQTFFEQLQAAKSKELWRVLVALSIRHLGPVAARTIARQFVTMSALRVASAEQLGEAEGI 668 Query: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE-------EIDSPFAGKTVVL 605 G V+A+ + ++F ++ ++ A GV + +E + G TVV+ Sbjct: 669 GEVIAASIRDWFTVPWHQEIVDAWEAAGVGAVSKAEGASEASLAGDTNLAPTLEGLTVVI 728 Query: 606 TGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEM 665 TG++ +R+ A+ + G K GSVSKKTDLV+AG AGSKL+KAQ LGI VI+ A Sbjct: 729 TGNIPGYTRESAQLAVEARGGKATGSVSKKTDLVVAGAGAGSKLSKAQALGIPVIESAGF 788 Query: 666 LRLLG 670 LL Sbjct: 789 EALLE 793 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 255/667 (38%), Positives = 381/667 (57%), Gaps = 13/667 (1%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 L T L H+ Y+ ++ P I D YD MREL+E+E +HPE SPT +G Sbjct: 6 RDDYIALCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMYLGD 65 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 P F + H PMLS+ NV+ + F R + L + + ELK+DG+AV+I Sbjct: 66 RPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPG--YSLELKIDGIAVAIR 123 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE + A +RG+G GEDIT+NV TIR++P++L E P LEVRGEVFL FE++ Sbjct: 124 YEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEA-PEDLEVRGEVFLSYEAFEEL 182 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N R G FANPRNAA G+L+ L + AKR L YG+ + +H L Sbjct: 183 NACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLI---TDQKKRSHFENLQ 239 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +WG V+ C S +EV+ ++EE R L IDGVVIKV+++A Q++LG + Sbjct: 240 LCSQWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTS 299 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + RWA+A+K+ + T + D+ QVG+TG +TPVA L PV ++G VS A+L+N DEI Sbjct: 300 KHYRWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEI 359 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 E+ +RIGD V + + G+VIP++V + L++R ++ P+ CPVC V + + Sbjct: 360 EKKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKE--KVSV 417 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RC L C E + F S+ A+++D +G+K++ +L E + + +D+F LT L Sbjct: 418 RCINPL-CSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQ 476 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 + +S QN++ ++ AK+ R L AL I VG + A LA +FGTL+ + AS++ Sbjct: 477 VPGFKDRSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLD 536 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 EL + +G VA+ + FF++ NR I + GV + + ++P GK V Sbjct: 537 ELMSIEGIGPKVAASIVAFFSKHENREEIRRMQELGVQVLSK----QSDKEAPLQGKVFV 592 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 LTG+L QM+R A+ R+ LG KV+ SVSK T VIAG AG KL KAQ+LG+ + +E++ Sbjct: 593 LTGTLQQMTRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESK 652 Query: 665 MLRLLGS 671 + R+L + Sbjct: 653 LSRILDA 659 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 284/802 (35%), Positives = 380/802 (47%), Gaps = 136/802 (16%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 + + + EL T+ H++ Y+V DAP + DAEYD L+REL ++E HP+L TPDSPTQ Sbjct: 41 LSAARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQ 100 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG F+ + H MLSLDN F+ E A+ +RV + ++ V + CE+K+DGLA Sbjct: 101 RVGGTFSTDFAAVDHREQMLSLDNAFNAEDLDAWAERVHREIGTSQ-VHYLCEVKIDGLA 159 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQ 178 +++LYE G LV AATRGDG TGED+T NV TI IP L +P +E+RGEVF+ Sbjct: 160 IALLYEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRGEVFMLV 219 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT 238 F +NE G FANPRNAAAGSLRQ +P+ITA RPL + +GVG L + Sbjct: 220 DQFAALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHWEAGTPS 279 Query: 239 ----HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 F+ WG+PVSD + E V + R + ++DG+V+KV+ L Sbjct: 280 ELRRQSDAYDYFRAWGVPVSDHNRVVEGMPGVQEMIDYYGDHRHDIEHELDGIVVKVDEL 339 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A Q QLG +RAPRWA+A+K+P +E T + D+ VGRTG +TP +EPV VAG VS Sbjct: 340 ALQRQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVLVAGSTVS 399 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSD 414 ATLHN E+ R G+ IGD VV+R+AGDVIP++V V+ R RE V PT CP CG+ Sbjct: 400 MATLHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTECPSCGTT 459 Query: 415 VER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY------ 467 + EG+ RC C +Q +E + H R A D++ MG + LV+ E+ Sbjct: 460 LAPAKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMGWEAAIALVDPEHNRPESA 519 Query: 468 -----------VHTPADLFKLTAGKLTGLERMGPKSAQ---------------------- 494 + T A F L + K Sbjct: 520 DAEGVPVQVPVLETEAGFFDFEVDALADVLVWREKKKAGVGTGVWEQVPFFWTKATAKTP 579 Query: 495 --------NVVNALEKAKETTFARFLYALGIR---------------------------- 518 EKAK R L AL IR Sbjct: 580 SKPSATTVKFFEEREKAKARPLWRVLVALSIRHVGPTAARALATAFESVEAIMAATEEEL 639 Query: 519 ----EVGEATAAGLAAYF---GTLEALEAA--------------SIEELQKVPDVGIVV- 556 VG A + +F ++E + A + VP G+ + Sbjct: 640 AATEGVGPTIARAVRIWFNGRSSVEPVPVAAAPTTEADTDEADTDEADTDAVPGDGVELP 699 Query: 557 ASHVHNFFAEE----------------------------SNRNVISELLAEGVHWPAPIV 588 A V A +R +I A GV Sbjct: 700 ADAVPGDGAPPADAPDPGKASSADEVHDEDDDVEIDGSDWHREIIDRWRAAGVRMRDE-- 757 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 E I G TVV+TGSL +RD K ++ G K AGSVSKKTD V+ GE AGSK Sbjct: 758 -RDESIVRTLEGFTVVVTGSLEGFNRDQVKEAIIVRGGKAAGSVSKKTDFVVVGENAGSK 816 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 AKA+ELG+ ++DEA + LL Sbjct: 817 EAKARELGLTILDEAGFVTLLA 838 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 278/678 (41%), Positives = 396/678 (58%), Gaps = 22/678 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +++ EL L + Y Y+V+D P + D +YD+ EL+ LE + ++ P SPT Sbjct: 1 MVDKIERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKE-TGVVLPYSPTL 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN-------EKVTWCCE 113 R+G L F++ H+ + SLD + ++ R + + + + Sbjct: 60 RIGDIVLDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIAT 119 Query: 114 LKLDGLAVSILY-ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 K DGL V++ Y E G+L +ATRG+G GE++T+ V+TI++IPLKL + EV G Sbjct: 120 KKFDGLTVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENH--DLFEVHG 177 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E + Q FEK N A N RN AAG+LR L+ + TA+R L+ F Y VG EG Sbjct: 178 EAIMTQEAFEKYNSSAD----SPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEG 233 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 + T+L + K+ GLPV D + +C S E++ +E+ R L +DIDG+VI ++ Sbjct: 234 YQ-FKTYLEMMDFIKEKGLPVDDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAID 292 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 + +E LG+ + P+WA+A+KF AQE T + DVE+ VGR+G I P A LEPV +AGV Sbjct: 293 DIRTRELLGYTVKFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVT 352 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 V ATL+N D+I+R G+RIG V IRR+ DVIP+++ L E++ E+ PT CP CG Sbjct: 353 VKRATLNNMDDIKRKGVRIGADVFIRRSNDVIPEIMG-TLENTLENSEEIFPPTECPACG 411 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S V A C L C Q +++ H+ SR AM++ G +K +QL EK + + + Sbjct: 412 SHVVL--NGAHYFCENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSIS 469 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 DL+KL L LE+ G K A+N++NA+E +KE F+YALGI VG TA + F Sbjct: 470 DLYKLKKEDLINLEKFGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKF 529 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +++ L+ A+ EEL V DVG +VA + FF EE + I ELL+ GV+ V E Sbjct: 530 KSIDGLKNATFEELVSVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVNPIFDEVKIVE 589 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 I F KTVV TG+L SR + K +L LGAKV+GSVSKKTD VIAGE+AGSKL KA Sbjct: 590 SI---FKDKTVVATGTLQNYSRTEIKTKLESLGAKVSGSVSKKTDYVIAGESAGSKLTKA 646 Query: 653 QELGIEVIDEAEMLRLLG 670 +ELG+EVI E E ++LG Sbjct: 647 EELGVEVISEEEFEKMLG 664 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 278/736 (37%), Positives = 387/736 (52%), Gaps = 71/736 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + L T + Y+ +D + D EYDR++R L ELE HPEL + DSPTQ V Sbjct: 4 DARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQTV 63 Query: 63 GAAP-LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G F+ + H MLSLDNVF E+F A+ +++ +V + CELK+DGLA+ Sbjct: 64 GGRAQTTLFAPVEHAERMLSLDNVFSFEAFEAWAAKIERDAGR--RVDYLCELKIDGLAI 121 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-PARLEVRGEVFLPQAG 180 ++ YENGVLV+AATRGDG GED+T N+R I AI +L G P +EVRGEVF P A Sbjct: 122 NLRYENGVLVTAATRGDGVVGEDVTENIRHIPAITQRLSGAGPFPPVVEVRGEVFFPVAK 181 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQL-DPRITAKRPL--------TFFCYGVGVLE 231 FE++N + + G +VFAN RNAA+GSLRQ + + A+R L +G+G Sbjct: 182 FEELNANQQAAGERVFANARNAASGSLRQKAEGKNPAQRRLMRDRLGRLRMLVHGIGAWP 241 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 + T G + WGLP S + + +E F + E R T+ +IDGVVIKV Sbjct: 242 NPPVA-TQSGVYELLRSWGLPTSAHGRVFGTVQEAADFIGRSAERRDTVEHEIDGVVIKV 300 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + L ++LG +RAPRWA+A+K+P ++ T + D+ VGRTG TP A +E V VAG Sbjct: 301 DELVLHDELGATSRAPRWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMEKVKVAGS 360 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V ATLHN D ++ G+ IGD VV+R+AGDVIP+V+ V+ R RE PT CP C Sbjct: 361 EVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFAMPTDCPEC 420 Query: 412 GSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY--- 467 G+ + EG+ RC C AQ + ++H SR +D++ +G+ L + + Sbjct: 421 GTPLAPAKEGDIDLRCPNAEFCPAQVRGRVEHIGSRGGLDIEALGEVAAAALTQPRFPER 480 Query: 468 --VHTPADLFKLTAGKL-----------TGLERMGP------------------------ 490 + T A LF L L TGL ++ Sbjct: 481 APLPTEAGLFGLRLEDLFPIEVVVRDSETGLPKLTETGVEKVDAPFRRRRQKKDGAFDPE 540 Query: 491 -------------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 KSA ++ L A+ R L +L IR VG A LA +FG+L+A Sbjct: 541 AEAFDGDEIAVPSKSAIELLANLRAARTKPLWRILVSLNIRHVGPVAARALADHFGSLDA 600 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS- 596 + AAS +EL V VG +VA V ++F + ++ +GV + P D+ Sbjct: 601 IRAASRDELAAVDGVGGIVADAVLSWFEIGWHCEIVENWARDGVQFAIPGHPGPGRADTG 660 Query: 597 --PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 +G TVV TGSL +R+ A+ +V G K A SVSKKTD V AG AGSKLAKA+E Sbjct: 661 GGVLSGLTVVATGSLEGYTREAAQEAIVAAGGKAASSVSKKTDFVAAGPGAGSKLAKAEE 720 Query: 655 LGIEVIDEAEMLRLLG 670 LG+ V+D A+ L+ Sbjct: 721 LGVRVLDAAQFTILVE 736 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 252/664 (37%), Positives = 372/664 (56%), Gaps = 22/664 (3%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + TL Y+ D P D EYD L + + E ++PEL SPT+R+G Sbjct: 3 YDEYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIGG 62 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A FS++ H M S++++FD+ LA+ R + + E K DG ++++ Sbjct: 63 AISEGFSKLAHGAQMWSMEDIFDDADLLAWLARGEKS-----GAQFYVEPKFDGASLNLT 117 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE GVL+SAATRGDG GED+T N R I+++PL++ R+E+RGE + ++ F+ + Sbjct: 118 YEGGVLISAATRGDGLIGEDVTQNARAIKSVPLQIP---YAGRIEIRGETLIAKSDFDAL 174 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N++ G +F+NPRNAAAGSLRQLD I AKR L F +GVG E H + Sbjct: 175 NDERAANGESLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVG--EHSLSFALHSQIME 232 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + G + +C+SA E+ A Y + R + +DG+VI+VN L++ Q+G+ Sbjct: 233 FVRSLGFLRDEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTV 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + PR+ VA+KFPA E++T +R++ QVGRTGA+TPVA + V++ G VSNATLHN DEI Sbjct: 293 KFPRFMVAYKFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEI 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 RLGL D V I R+GDVIP++ +V R E+ P CPVCG + ++ A+ Sbjct: 353 ARLGLMKNDFVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKL--LDEGALI 410 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 +C L C A+ SL +F S++ M+++G+ D I QL E + D++ L A L Sbjct: 411 KCQN-LDCKARVIGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLAD 469 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LE K N++ A+ +K RF+ +LGI +GE A +AA FG + AS + Sbjct: 470 LEGFADKKISNLLGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFG--QDWLDASED 527 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 E+ ++ G +A + F + AP + + S F ++VV Sbjct: 528 EILRLEGFGEAMARSLAEFCKINRE------KILNLSEIIAPRAPQMQTVKSAFTDRSVV 581 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 +TG+LS+ RD+ KA+L+ +GAKV GSVS KTD V+AG AGSKL KA+ LG+ VIDE+E Sbjct: 582 ITGTLSR-PRDEFKAKLLAMGAKVQGSVSAKTDFVLAGAEAGSKLQKARSLGVRVIDESE 640 Query: 665 MLRL 668 L Sbjct: 641 FEAL 644 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 288/552 (52%), Positives = 388/552 (70%), Gaps = 3/552 (0%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L L EY Y+V+DAPE+PD+EYD++ R L+++E HPELI DSPTQRVG P Sbjct: 27 MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQRVGGKPA 86 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILY 125 F Q+RH VPMLSL N F++ LAF++RV++ L + + + + K DGLA+SI Y Sbjct: 87 DGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFDGLAISIHY 146 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 NG+ A TRGDGT GED+++NV+TIR++PLKL G +PA LE+RGE+F+ + F ++N Sbjct: 147 TNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMTKKDFLQMN 206 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVG-VLEGGELPDTHLGRLL 244 + G KVFANPRNAAAG++RQLDP++ A RPL F+CYG E + + Sbjct: 207 QRQAELGLKVFANPRNAAAGTIRQLDPKVAASRPLRFYCYGAALEREQLRELKSQSAMMK 266 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 GLPVS+ AE +L+FY V R TL F+IDGVV KV+S Q+QLG+VA Sbjct: 267 WLAALGLPVSELSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSFDLQDQLGYVA 326 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 +APR+AVA KFP E ++ + ++E QVGRTG+ITPVA+LEPV V GV+VS+ATLHN DEI Sbjct: 327 KAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVSSATLHNLDEI 386 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 +R LR+GD+V++RRAGDVIP+V+ ++R + V PTHCP+C S V + EGEA Sbjct: 387 QRKDLRVGDQVLVRRAGDVIPEVLPFPGNQRSPVSSAFVMPTHCPICNSLVRKEEGEAAF 446 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RCTGGL+C AQ +S+ HF RRA+D++G+G K+++ LV+KE+V TPADLF+L L Sbjct: 447 RCTGGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADLFRLEFDALVQ 506 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 LERMG KSA+N++++++KAK+TTF RFL+ LGIR VGEATA LAAYF +E L AS E Sbjct: 507 LERMGDKSARNLLDSIDKAKQTTFGRFLFGLGIRHVGEATARDLAAYFKNVERLMNASEE 566 Query: 545 ELQKVPDVGIVV 556 EL +V +G+ Sbjct: 567 ELLEVTMLGLWW 578 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 301/631 (47%), Positives = 389/631 (61%), Gaps = 40/631 (6%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + E + LR L + + Y+V+D P +PD EYDRL REL LET+HPEL TPDSPT R Sbjct: 15 DRPEARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPTLR 74 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFD--EESFLAFNKRVQDRLK---NNEKVTWCCELKL 116 VG A L F+ +RH +PMLS+ D AF+ V+ L + V + ELK Sbjct: 75 VGGAVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAELKF 134 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN--IPARLEVRGEV 174 DGLA+++ YE G LV AATRGDGTTGED+T N+RTIR IPL L + +P LEVRGEV Sbjct: 135 DGLAINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRGEV 194 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-GG 233 ++ + FEK+N R G K F NPRN AAG++RQLDP++ A+RPL+FF YG+G + Sbjct: 195 YMRRDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVAGWK 254 Query: 234 ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 +P TH L + +G PVS+ E ++ F+ + R +L FDIDGVV KVNS Sbjct: 255 GMPGTHSSMLDVLQAFGFPVSNERAAVAGGEGLVRFHEAIRAKRDSLPFDIDGVVYKVNS 314 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 LA Q +LGF +R PRWAVA K+PAQE +T V ++ QVGRTGAITPVARL PV V GV V Sbjct: 315 LALQRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITPVARLVPVFVGGVTV 374 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERP---------------ED 398 +NATLHN DE+ R +R+GD V++RRAGDVIP+VV+VVL RP Sbjct: 375 TNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPLDDVPGSDLFNPQQQPK 434 Query: 399 TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458 P CPVCGS V R EGEAVARC+GGL C AQRKE+++HF RR MD++G+G++ Sbjct: 435 YPPFELPKTCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLGERY 494 Query: 459 IDQLVEKEYVHTPADLFKLTAGKLTGLERMGP-----------------KSAQNVVNALE 501 ID LVE +YVH ADL+KLT ++R K A+N++ ++ Sbjct: 495 IDNLVELDYVHGIADLYKLTLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLEGIQ 554 Query: 502 KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVH 561 +K ARFL+ALGIR VGE+TA LA + G+L + A L +PDVG VA + Sbjct: 555 ASKTPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPAPLLLALPDVGATVAEAIA 614 Query: 562 NFFAEESNRNVISELLAEGVHWPAPIVINAE 592 +FFAE N+ + LL GV NA+ Sbjct: 615 DFFAEPKNQQALDALLEAGVAPQGEHAPNAK 645 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 33/250 (13%) Query: 448 AMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKET- 506 A+ + +G+ L + ++ + A + + A L L +G A+ + + + K Sbjct: 567 ALGIRHVGESTAKTLAD--WLGSLAMIRRAPAPLLLALPDVGATVAEAIADFFAEPKNQQ 624 Query: 507 --------------------------TFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 A LG+ ++ A LA TL L + Sbjct: 625 ALDALLEAGVAPQGEHAPNAKLREKLEPAELYATLGVPKLTATRAKQLAVAAPTLAQLAS 684 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ++L +P V + + + A +R +++L A A + A E G Sbjct: 685 VEPDQLAGLP---ADVTASLLEWLASHDHRAQLAKLDALRGELLAAMPAEAAEEGVLD-G 740 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KTVVLTG+L ++RD+AKA L GAKV+GSVSKKTD V+AGE AGSKLAKA+EL ++V+ Sbjct: 741 KTVVLTGTLPNLTRDEAKAMLEAAGAKVSGSVSKKTDYVVAGEDAGSKLAKAEELNVKVL 800 Query: 661 DEAEMLRLLG 670 DEA ML LL Sbjct: 801 DEAGMLALLK 810 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 241/677 (35%), Positives = 371/677 (54%), Gaps = 35/677 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++++ EL L H Y+ D+PEI DAEYD + +L +P L P V Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFP----VVV 57 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F +++H PMLSL N+F EE + + ++ + L + + CE K+DG++ S Sbjct: 58 GYPASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFS 117 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 Y NG LVS ATRGDG GE+I N++ I P+++ ++P LEVRGEVFL F+ Sbjct: 118 ARYVNGKLVSCATRGDGKIGENIIDNMKVINGFPIEI--MDVPDLLEVRGEVFLDHDTFQ 175 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 + + F+NPRNAAAGSLRQL+P IT +R L +F Y + + Sbjct: 176 TL---------EGFSNPRNAAAGSLRQLNPEITNERNLQYFAYS---ASKIDGIEHQEDV 223 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L G + E+++FY V R + +DIDG+V KVN L +LG Sbjct: 224 LHFLSGRGFMTNPLRLASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGT 283 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 ++ APRWA+A KFP+ T + ++ VGRTG ITPVA L+P+ + GV++S A+L+N D Sbjct: 284 LSDAPRWAIAHKFPSHRAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNED 343 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 E+ER +R GD V++ RAGDVIP+V+ V +S R R +FP CP C S + R EA Sbjct: 344 ELERKDIREGDLVIVERAGDVIPKVLEVDISYRTNQER-FIFPDKCPSCSSTLIRKNNEA 402 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA--G 480 RC C Q + +KH VS +A D+DG+G I +EK ++ PAD+F+L Sbjct: 403 ATRCNNSKKCPEQVIQQIKHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRD 462 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 ++ + G KS +N++ ++ +++ + +F+++LGI+ +GE TA LA F + Sbjct: 463 EIKKYDGWGEKSVENILKNIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFD 522 Query: 541 ---------ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 + +E++ + +G + + +FF++ N N++ L + I + Sbjct: 523 KMSMLKDDTQTEDEIRNLDGMGSCICESLLDFFSDSDNCNMVKSLSNHVM-----ITDHT 577 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 I +GK V TG+L ++R++AK + + G V S+SK+ D V+AGE AGSKLAK Sbjct: 578 VNIGGSLSGKKFVFTGTLLSITREEAKEIIKKAGGIVVNSISKQIDYVVAGEKAGSKLAK 637 Query: 652 AQELGIEVIDEAEMLRL 668 A ELGI +I+E ++ Sbjct: 638 ANELGIAIIEEKTLIEF 654 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 248/670 (37%), Positives = 386/670 (57%), Gaps = 17/670 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +++ E L + Y+ +D + DA YD L +EL+ E K+P I +SPTQ Sbjct: 1 MIKSQKEYLERIAYLNTLSHHYYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VGA +F++ H + M SLD+VF++ A+ +R+ LK ++ C KLDG++ Sbjct: 61 KVGATATNSFNKNPHLMRMWSLDDVFNQSELQAWLQRI---LKTYPSASFVCSPKLDGVS 117 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LY++G LVSA TRG+G GE +T+N + I IP + +E+RGEV + + Sbjct: 118 LNLLYQHGKLVSATTRGNGLEGELVTNNAKHIANIPHFI---AYDGEIEIRGEVIISKED 174 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+ +N++ +FANPRNAA+GSLRQLD IT KR L F +GVG L + Sbjct: 175 FDALNKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFL--SFK 232 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L G + L ++ +E+ YH + +R +DG+VI VN L Q++L Sbjct: 233 ECLDFIVSLGFSAIQYLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKEL 292 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G+ ++P++A A+KFPA E+ T + V QVGR+GAITPVA LEPV +AG +++ ATLHN Sbjct: 293 GYTQKSPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHN 352 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 EIE+ + + DKVV+ R+GDVIP+++ + + R ++++ P CP+C ++ E Sbjct: 353 YSEIEKKNIMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPKVCPICSHELLCEE- 411 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C L C A+ KESL HF S+ A+++ G+GDK+I+QL E++ + DL+ L Sbjct: 412 -IFTYCQN-LNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLE 469 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L++ K AQN+++A++K+K R + ALGI +G+ + LA +G + Sbjct: 470 DLMRLDKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAK-YGL--NVLE 526 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 S E ++ G+ + + NF+A SN+ I L + + +E S F Sbjct: 527 KSEAEFLEMEGFGVEMVRSLVNFYA--SNQEFIRSLFELLNPKNSDMAEEKQESSSVFNN 584 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 KT+VLTG+LS+ R + L LGAK+ SVS KTD +I GE AGSKLA A++ G+ V+ Sbjct: 585 KTIVLTGTLSK-PRQEYAQMLENLGAKITSSVSAKTDFLIVGENAGSKLALAKKHGVSVL 643 Query: 661 DEAEMLRLLG 670 +E E+L+ L Sbjct: 644 NEEELLKRLK 653 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 271/699 (38%), Positives = 389/699 (55%), Gaps = 51/699 (7%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E + ++ T+LR + +H+ LYH PEI DAEYD+L ++L E+E + P TQ Sbjct: 4 LEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACV----TQ 59 Query: 61 R-VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 VGAAP FS+I+H PMLSL+N +DE+ F R++ L E++ CE K+DGL Sbjct: 60 DGVGAAPDEKFSKIKHREPMLSLENAYDEQGVERFLSRIKRFLIE-EEIEVFCEPKIDGL 118 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 + S +YE+G V AATRGDG GED+T NV TI+ P L ++ RLEVRGE+++ + Sbjct: 119 SFSAVYEDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQ--DVQDRLEVRGEIYINNS 176 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F K+N+D FANPRNAAAGSL+QLD ITA RPL +F Y + + + Sbjct: 177 DFLKLNKDNE------FANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKE----KSQ 226 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 L + + G V++ +L + +L FY+KV R +L +DIDG+V KVN L Q + Sbjct: 227 SEVLNRLESLGFCVNEHRSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSR 286 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG +APR A+A+KF A T + + QVGRTG +TPVA L PV++ GVLVS A LH Sbjct: 287 LGSTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLH 346 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N DEI+R +R GD V I+RAGDVIPQ+V V R D VFP CP CG V+ Sbjct: 347 NQDEIKRKDVREGDIVTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAE- 405 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF---- 475 A RC+ L C AQ L HFVS+ A D+ G+G+K I + + D+F Sbjct: 406 -GAAIRCSEELTCKAQIIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEE 464 Query: 476 KLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 +L L G +S N++NA++ + T RF+++LGIR +G+ A LA Y+ + Sbjct: 465 RLNEFSLKEQPDWGERSIANLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSY 524 Query: 536 EALEAASI-----------------------EELQKVPDVGIVVASHVHNFFAEESNRNV 572 + I +EL + +G VA + +FF++E N + Sbjct: 525 NNWYNSMIKLLSNDAEVGVGGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKM 584 Query: 573 ISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 + +L + +++ K +V TG L MSR +AK R LGAKV+ ++ Sbjct: 585 LKDLTDYLQILSVNSNSSNSVLNN----KVIVFTGKLLTMSRGEAKVRAKALGAKVSSNL 640 Query: 633 SKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 S K D ++AGE G+K KA ELG+ +++E + R++ S Sbjct: 641 SAKIDYLVAGEKPGNKYKKAVELGVGILNEDQWYRMINS 679 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 298/668 (44%), Positives = 410/668 (61%), Gaps = 77/668 (11%) Query: 1 MES-IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPT 59 ME + ++ ELR + + ++ Y+ + PEI DA+YD+L REL+ELE K+PEL+T DSP+ Sbjct: 1 MEQGVIERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPS 60 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 RVG A +F ++RH +PMLSL N FDE F R+ R+ ++ + + E K DGL Sbjct: 61 MRVGGAVRKSFVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGL 120 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A+S+ YE G V TRGDG GED++ N+RTIR++PLKL G N+PA LEVRGEV++P+ Sbjct: 121 AISLRYELGKFVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRD 180 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE-------- 231 GF + N+ A G K+ ANPRN AAGSLRQLD RI+A+RPL+FF YGVG+++ Sbjct: 181 GFSEFNKRAMARGEKLLANPRNGAAGSLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEE 240 Query: 232 -GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIK 290 + TH L Q + WG PVS V + + ++ +LA+Y ++ E R L FDIDGVV K Sbjct: 241 IPQSIASTHSAMLAQLRAWGFPVSSLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYK 300 Query: 291 VNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG 350 ++ LA Q ++GFV+RAPRWA+A KFPAQEQ T V +E Q+GRTGA TPVARL+PVHVAG Sbjct: 301 LDDLAGQREMGFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAG 360 Query: 351 VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPV 410 V+V+NATLHNAD+I RL +R+GD V++RRAGDVIP+V VV +RP T+ PT CPV Sbjct: 361 VIVTNATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPATQSWQMPTQCPV 420 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDK------------- 457 CGS++ R EG+AV RC+G L C AQRKE+ +HFVSRRAMDVDG+G+K Sbjct: 421 CGSEIVREEGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQG 480 Query: 458 -------IIDQLVEKEYVHTP--------------------------------------- 471 +DQL++ + T Sbjct: 481 VADLYLLTVDQLLQLRMISTAESPHAFLREAREHLASGAYAQLEATLVGIGVDLAGEREV 540 Query: 472 -----ADLFK--LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEAT 524 ADL + L +++ K A+N++ A+E +++TT RFL+ALGI VGE+T Sbjct: 541 PQTWQADLLRAGLPTFDW-NRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGEST 599 Query: 525 AAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWP 584 A L+A+FG L+ + ++VPD+G VA + +FF + N+ I LLA V Sbjct: 600 AKALSAWFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLARKVRIG 659 Query: 585 APIVINAE 592 + + Sbjct: 660 DTHPPSPK 667 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 111/248 (44%), Gaps = 26/248 (10%) Query: 448 AMDVDGMGDKIIDQLVEKE----YVHTPA-DLFKLTAGKLTGLER-----MGPKSAQNVV 497 A+ ++ +G+ L + LFK + R Q + Sbjct: 589 ALGIEHVGESTAKALSAWFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAI 648 Query: 498 NALEKAK---------------ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + L K E A L L I +V AA +A FG+++AL Sbjct: 649 DHLLARKVRIGDTHPPSPKLRGELRLANLLEDLEIPKVTPIRAAQIATAFGSIDALRNGG 708 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E L + V VA + + +N + + A + EE P G+T Sbjct: 709 PEPLVEA-GVPQSVAESLATWLLVPANDTLAVNAQKKLSALLAMMPEAGEEKTGPLDGQT 767 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV+TG+L+ ++RD AK RL LGAKVAGSVSKKT ++AGE AGSKL KAQ LG+E+ DE Sbjct: 768 VVITGTLAALTRDAAKQRLEALGAKVAGSVSKKTAFLVAGEEAGSKLDKAQSLGVEIWDE 827 Query: 663 AEMLRLLG 670 A +L LG Sbjct: 828 ARLLAFLG 835 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 268/672 (39%), Positives = 413/672 (61%), Gaps = 5/672 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT-PDSPT 59 M+ I+ + +L+ +R+H YLYH +++P+I D +YD L+ EL+ LE K + DSPT Sbjct: 1 MKDIKNYILKLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPT 60 Query: 60 QRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 119 Q VG+ L F + H PMLSL+NVF + FL F K++ + + EK+ +C ELK DG+ Sbjct: 61 QSVGSENLPEFKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNI-TVEKIFFCSELKFDGV 119 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 A++++Y NG+L A TRG+G GED+TSNV I ++P KL G +IP LEVRGE+F+ ++ Sbjct: 120 AINLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIPETLEVRGEIFMLKS 179 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F+K+N + K+F+N RNAA+GSLR + ++T R LTF+CYG G D+H Sbjct: 180 DFKKLNVRLTKFKKKLFSNSRNAASGSLRHKNAKVTELRSLTFYCYGCGYCSYENFTDSH 239 Query: 240 LGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL + K WG P+SD L S +E+L FY+ ++ +R L F+IDG+VIKV+S+ Q+ Sbjct: 240 FLRLKKLKSWGFPISDYNFLHSSYDEILRFYNFIQNERYFLNFNIDGIVIKVDSICLQKS 299 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 L ++APRWAVA+KF + ++T + ++ +QVGRTG ITPVA++ P++++GVL+ +LH Sbjct: 300 LSTTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVAQVTPIYISGVLIKKVSLH 359 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N +EI RL L IGD V I+R+GDVIP ++ V + + ++ P CP CGS ++ Sbjct: 360 NFNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNEDISIPKFCPECGSKLKVDS 419 Query: 420 -GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 RC GL C +Q K+ L +F S++ +++ G+G KIID+LV+ YV +D+F L Sbjct: 420 FSNIKIRCMAGLKCLSQFKKLLHYFCSKKGLNILGLGPKIIDKLVDLGYVSDLSDIFDLN 479 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 LT +E +G +QN++ ++ +K +F++FL +LGI EVG A ++ YF TL+ Sbjct: 480 VSLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGIFEVGSIVARSISNYFFTLDKF 539 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 +S EE + +G+ +A +++NF +E N+N+I +L + I ++ Sbjct: 540 MNSSKEEFLLINGIGVNIADNLYNFINDEFNKNIIFKLSKKLNISSDINAIIDN--NNTL 597 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 K +V +GS S SR +LG V SVSK D +I G+ G KL KA++ I Sbjct: 598 FRKKIVFSGSFSNFSRSKIIELSKKLGIIVVSSVSKSVDYIIIGKKPGRKLIKAKKFSIP 657 Query: 659 VIDEAEMLRLLG 670 I E E L ++ Sbjct: 658 GIYEKEFLNIIN 669 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 241/668 (36%), Positives = 377/668 (56%), Gaps = 17/668 (2%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M ++ ++ +L +++++Y Y+V+ P I D EYD L + L++LE HP+LI DSPTQ Sbjct: 1 MMDVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RVG + F ++ H PMLSL+N F + F + + N K + E K+DG++ Sbjct: 61 RVGGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNIN--FQTNSKNEFVVEPKIDGVS 118 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ Y+NGVLV A TRGDG+ GED+ +NV+TI++IPL + +E+RGE+F+ + Sbjct: 119 ISLTYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIPFTK---TIEIRGEIFVDKKT 175 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F IN K FAN RN AAG++R L+ ITA+R L Y + E T Sbjct: 176 FLAINNQL----EKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPN-GLEESITTQT 230 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L Q K+W PVSD + + ++ +++ + ++ R L F++DG+VIK+NSL +QL Sbjct: 231 MVLEQLKQWKFPVSDTIRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQL 290 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G +++PRWA+AFKF + T + V +GRTG + A+LE V++ G V+ ATLHN Sbjct: 291 GATSKSPRWAIAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHN 350 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I+ +RI D VVI +AG++IP+V+ V L +R DT + +CP C S + ++ Sbjct: 351 FDYIKTKDIRINDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIVD 410 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--T 478 E CT C + + + +FVS+ AMD++G+ I +L E V + DL+ L Sbjct: 411 EVDQYCTN-ETCKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDK 469 Query: 479 AGKLTGLE-RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 ++ L+ ++G K +V+ +E +K+ AR L LGI+ VG A LA +F ++A Sbjct: 470 KNQVLKLDLKIGDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKA 529 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L+ AS+E L + DVGI VA ++N+F + ++ +I +L V + E +S Sbjct: 530 LQHASLENLISLNDVGITVAESLYNWFHDPNHLQLIEQLELRQVKTDQLPLKINFETNSI 589 Query: 598 FAGKTVVLTGSLSQMSRDDAKARL-VELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQEL 655 + K ++TGS +SRD K L + + A V D VIAG K+ A+EL Sbjct: 590 YFQKRFLITGSF-NISRDQIKDLLSAKFDCQFASEVKPTVDFVIAGNKPTLRKINHAKEL 648 Query: 656 GIEVIDEA 663 I +I+EA Sbjct: 649 NIPIINEA 656 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 253/686 (36%), Positives = 389/686 (56%), Gaps = 29/686 (4%) Query: 1 MESIEQQLTELR--TTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M + ++ L+ + H Y+ + P + D E+D L +++ +LE K+ L + SP Sbjct: 1 MNDKDLEIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKL 116 T+ +G P F +I+H+VPMLSL N F+EE F K++ + L + + + E K+ Sbjct: 61 TKSIGFKPSKNFQKIKHKVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKI 120 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DG++ S++Y +G L +RGDG GEDIT N++TI+ IPL++ N P +++RGEVF+ Sbjct: 121 DGISASLIYIDGKLTKGLSRGDGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFI 180 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 F+KI + FANPRNAA+GSLRQ + ITAK PL F Y G + + Sbjct: 181 ENNDFKKIKDK--------FANPRNAASGSLRQKNSLITAKIPLKFIAYTYGYEKKMNI- 231 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 L K WG + + ++ + ++EE R L FDIDG+V KVN Sbjct: 232 KNQTSFLENLKLWGFKTNPFNKKIIGVKNLMLNHKELEEKRKELAFDIDGIVYKVNDFDL 291 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q++LGF A APRWA+A KF A ++ + ++E Q+GRTGA+TPVA+++PV++ GV+VSNA Sbjct: 292 QKRLGFAANAPRWAIAHKFSANSSISEIMNIEIQIGRTGALTPVAKIKPVNIGGVIVSNA 351 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN DEI R +R+GD V + RAGDVIP VV+V L +R +++++ +FP CP CGS Sbjct: 352 TLHNEDEIVRKDIRVGDTVTVERAGDVIPHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTI 411 Query: 417 RVEGE------AVARC-TGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 + E AV RC + G C E +KHFVS+ A ++DG G KI++ + V Sbjct: 412 KDYNETTKRQDAVRRCASEGFECEKIAIERIKHFVSKDAFNIDGFGKKIVENFWNLKLVR 471 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 P D+FKL K+ LE G S N+ ++E+ K + RF+Y+LGIR +G+ A +A Sbjct: 472 LPQDIFKLNYNKIEELEGWGKLSVANLRFSIEEKKNISLERFIYSLGIRHIGQENAKLIA 531 Query: 530 AYFGTLEALEAAS----IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPA 585 + T S IE L + +GI + FF ++N V+SEL + Sbjct: 532 RHLKTASNFFRLSGEKNIESLSNIDGIGITQIQSIKKFFLNKTNLKVLSELEKNLLIKDV 591 Query: 586 PIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA 645 ++ + KT +LTG L+ +SR +AK+ + + K+ +V+KK D +IAG+ Sbjct: 592 ILI----NNNGLLKNKTFMLTGKLNGISRAEAKSLIEQNSGKIISNVNKKLDYLIAGDKP 647 Query: 646 G-SKLAKAQELGIEVIDEAEMLRLLG 670 K+ A+E I++I++ E L++L Sbjct: 648 TLKKINTAKEWNIKIINQTEWLKMLN 673 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 268/756 (35%), Positives = 382/756 (50%), Gaps = 90/756 (11%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + +++ LR+ LR H LY+ PEI DAEYD L EL +LE HPEL PDSPT+R Sbjct: 43 DPAHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHPELSDPDSPTRR 102 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFD-------EESFLAFNKRVQDRLKNNEKVTWCCEL 114 VG APL F+QIRH VPMLS+D++F+ +E F ++ L+ E V E Sbjct: 103 VGGAPLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQT-ENVPVSVEP 161 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG+A+SI+Y NG L AATRGDG G+D+T+NVRTIR++PL L P LEVRGEV Sbjct: 162 KIDGVALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLPPGAPP-VLEVRGEV 220 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 F+P F K+NE+ G FANPRNA AG+L+QLDPR A RPL F +G+G EG E Sbjct: 221 FMPNEAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAHGLGAYEGPE 280 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSL 294 L D + G+P ++ V +S E ++ R TL + DG VIK++S Sbjct: 281 LRDA-KDFWNMLRHCGIPCNEPVYYTDSLESTRQAVRDIDRLRHTLPYGTDGAVIKISST 339 Query: 295 AQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVS 354 A +E LG ARAPRWA A+KFP +++ T + ++ QVGRTG +TPVA L+PV ++G V+ Sbjct: 340 ATREALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQPVLLSGSTVA 399 Query: 355 NATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH----CPV 410 ATLHN DEI+R +RIGD V++ +AG++IP V+ V LS+RP+D R CP Sbjct: 400 RATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSILEATKGLCPA 459 Query: 411 CGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 CG+ + + EG+ RCT C AQ + HF SR A+DV+ +G + + L + Sbjct: 460 CGNPIMKEEGKVAWRCTN-FTCPAQAVTGITHFCSRSALDVESIGSSVAEALRSSGLASS 518 Query: 471 PADLFKLTAGKLTGL--------ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGE 522 DLF L +L L R G K+A+ ++AL+ A+ R+L A GI VGE Sbjct: 519 ALDLFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIAFGIPLVGE 578 Query: 523 ATAAGLAAYFGTLEALEAAS-IEELQKVPDVGIVVASHVHNFFAEES------------- 568 A LA L+ + + + ++ ++ ++ A N + Sbjct: 579 VVAKALADTHPDLKHVADSPYLRDIVRLDELVEQAAKTNPNTRENKKAVKEGALSAEAVQ 638 Query: 569 -NRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTG---------------SLSQM 612 + E + + G + + ++ + Sbjct: 639 ERHQELMEEIDRLTAPYLATGYLRKNTAKFSYGSEIGVAAAKSLRSFFASAAGNHTMDVL 698 Query: 613 SRDDAKARLVELGA----KVAGSVSKKT-----------DL---VIA------------- 641 R + A AGS+S KT D +IA Sbjct: 699 HRLGINPQSQSYRASLLEIPAGSLSGKTFVITGTLSHPRDYFEQLIASHGGKATGAISKS 758 Query: 642 ------GEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 G GSK KA +LG+ VI E + +++G+ Sbjct: 759 TSCLLAGNGGGSKRDKALKLGVPVISEEDFYKMIGN 794 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 245/682 (35%), Positives = 377/682 (55%), Gaps = 33/682 (4%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + EL + +H LY+ D EI D EYD+LM++L+ E +HP+ + PDSP+Q++G Sbjct: 4 ETYQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGT 63 Query: 66 PL-AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A ++ H VPMLS+++VFD +S + + K+VQ+ + + E K+DGL++++ Sbjct: 64 TKREAGVKVEHNVPMLSIEDVFDFQSVIDWVKKVQE---MHPDAIFSVEQKIDGLSMTLR 120 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G L A TRGDG GED+T N R I +P KL + LE+RGEV++ + FE Sbjct: 121 YRKGRLELAETRGDGHIGEDVTQNARAIPQVPDKLPITDP--YLELRGEVYMTRDRFEAY 178 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + + ANPRN AAG+LRQLDP ITAKR L F + V E + L L Sbjct: 179 NARQEKDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNVQDGE-PHFMRSQLDNLD 237 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 + GLPV+ ++A+EV+A ++ + R LG+DIDG V+K++ +A ++ A Sbjct: 238 RLSAMGLPVT-YHKRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVKIDQIAYRKDFPAGA 296 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE------PVHVAGVLVSNATL 358 + +A+K+P +E++ + + VGRTG +T + P + G VS ATL Sbjct: 297 KYSAGHIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSRATL 356 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D I ++ + IG + ++G++IP++ V + P CPVCG ++E+ Sbjct: 357 HNQDYIRQMKIGIGGHYKLFKSGEIIPKLNGCVKEPK----AVFKAPQFCPVCGEELEQE 412 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE-------YVHTP 471 EG A RC C AQ ++ +F R MD+ G+G ++D L +++ Y+ + Sbjct: 413 EGTADIRCVNP-SCPAQISRTIAYFAGRSCMDIAGLGQTLVDALCQEKITGSETFYLTSY 471 Query: 472 ADLFKLTAGKLTGLERM---GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 D+++L + + + R K+ ++ A+E +K R L LGIR VG +TAA L Sbjct: 472 VDIYRLREHRDSLISRGILGKEKNTDKILAAIEDSKSQRPTRLLAGLGIRNVGLSTAAAL 531 Query: 529 AAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 A + L L A E+LQ +PD+G A+ + +FFA E R ++++ A G+ P Sbjct: 532 MAVYPDLMDLMHAGFEDLQGIPDIGEKTAADIVHFFAHEDKRRMMADFRALGLTMRMPEE 591 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSK 648 E + AG T+V+TG L M R +AKA + + G K GSVS KTD ++AGEAAGSK Sbjct: 592 EKTEAL----AGLTIVVTGKLPGMERSEAKALIEKNGGKCTGSVSGKTDYLLAGEAAGSK 647 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 L KA+ LGI VIDE + L+ Sbjct: 648 LDKAKSLGIPVIDEEGLKALIE 669 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 237/677 (35%), Positives = 374/677 (55%), Gaps = 24/677 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + +L ++ + +Y Y+ +D P + D EYD+L +L +L+ K+ + +SPT Sbjct: 1 MNKL-DELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQ-KNLAYVPENSPTN 58 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--------KVTWCC 112 RVG L F + H +LS D + + +R + + E + + Sbjct: 59 RVGGQILDKFEKHYHLTRLLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLEFVM 118 Query: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 E K DGL +++ YE+G+L +AATRG+G GE + + TIR+IP + + LE++G Sbjct: 119 EYKFDGLTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKE---KSLLEIQG 175 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E +P + ++ N++ N RNAAAG++R LD + TAKR LT + Y V Sbjct: 176 EALMPLSELDRYNKE----NETQLKNARNAAAGAIRNLDTKETAKRHLTAYFYAV--PTN 229 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 L K+ L V S +E++ +++E+R TL DGVVIK+N Sbjct: 230 SINFKNEEEMLSFLKEMKLNVHPYHKKVTSLDEIINELERIKEERKTLDVLTDGVVIKIN 289 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVL 352 QE LG + PRW++AFKF +E T + DV + VGRTG +TP A LEPV +GV Sbjct: 290 DKKTQEVLGVTEKFPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVT 349 Query: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 VS ATL+N D+IER ++IG V IRR+ DVIP+++ VV +P T ++ PTHCP C Sbjct: 350 VSRATLNNYDDIERKKVKIGSDVFIRRSNDVIPEILGVVDENQPG-TIKIEKPTHCPYCH 408 Query: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 S++ + + C + C Q ++H+ SR AMD++G+ +K I QL+E+ + Sbjct: 409 SELIQE--KVHIVCPNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIY 466 Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 D++ LT +L LER G K A+N++ +++ +K F+YA+GI VGE TA LA F Sbjct: 467 DIYDLTYDELIKLERFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKF 526 Query: 533 GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + + L A+++EL ++ D+G + ++ FF +++ I LL++G++ P ++ Sbjct: 527 KSFDKLRNATVDELIEIDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNPRENTSD 586 Query: 593 EIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 G V+TG++ +RDD K L + GA V GSVSK TD+V+AGE AGSK KA Sbjct: 587 SK--KLDGINFVITGTIDGYNRDDIKKMLEDNGANVRGSVSKNTDIVLAGEKAGSKKDKA 644 Query: 653 QELGIEVIDEAEMLRLL 669 EL +E+ ++ ++ L Sbjct: 645 IELNVEIYEDEKLYSFL 661 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 244/711 (34%), Positives = 395/711 (55%), Gaps = 48/711 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT---PDS 57 +E ++L+ L + +H+ Y+ P I D+EYD L R + P+L P+ Sbjct: 14 IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELK 115 P ++G + ++ H +P LSL+ +++ E F R+ + + + + E K Sbjct: 74 PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175 +DG ++I YE G V AA RGDG +GED+++ +R I IP L NIP +EVRGEV+ Sbjct: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSL-NIPEIIEVRGEVY 192 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235 + + F +N++ G K +ANPRNAA+G LR+L+P R L FF +G+G Sbjct: 193 ISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPT-DITRYLNFFVHGLGKTSEI-F 250 Query: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 L + + G PV++ V + ++++Y++++ R TL +DIDG+V KV+ + Sbjct: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Q+QLG AR+PRW ++ KF ++ T + D++ Q+GRTG +TPVARLEPV++ G L++N Sbjct: 311 LQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITN 370 Query: 356 ATLHNADEIERL-----------GLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF 404 ATLHN D I+ L +R+GD+V+++RAG+VIP+VV+++++ER D + F Sbjct: 371 ATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFSF 430 Query: 405 PTHCPVCGSDVERVEG------EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458 P+ CP+C S V R A RCTGGL C AQ+ E LKHFVSR A +++G+G + Sbjct: 431 PSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQQ 490 Query: 459 IDQLVEKE----YVHTPADLFKLTAGK------LTGLERMGPKSAQNVVNALEKAKETTF 508 +D + E + PAD+F L + + + G S N+ +++ K + + Sbjct: 491 LDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNISL 550 Query: 509 ARFLYALGIREVGEATAAGLAAYFGTLEAL----------EAASIEELQKVPDVGIVVAS 558 RF+++LGIR VG A LA Y+ + + L +VP VG ++A Sbjct: 551 ERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQ 610 Query: 559 HVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAK 618 + F+ N + LL E I + + + S K +V TG+L ++ R A+ Sbjct: 611 AIVEFYQNPRNICAVEALLKEV---SPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQ 667 Query: 619 ARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + +LGA V+ +S+KTD++I G+ GSKL KAQ+LG+++++E + L LL Sbjct: 668 EYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 268/763 (35%), Positives = 371/763 (48%), Gaps = 95/763 (12%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 E+ + +L + Y+ D+P + DA+YDR+ RE+ E+E ++P+L DSPT Sbjct: 9 FETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADSPTM 68 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG + + FS++RH M+SLD+VF E + R+ + ++ + E+K+DGL+ Sbjct: 69 SVGGSVDSGFSEVRHLAQMMSLDDVFSLEELAGWETRMAEATGISD-LEMTTEVKVDGLS 127 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +++LYENG LV AATRGDG GED+T+N RTI +IP L G +P R+EVRGEV+ P A Sbjct: 128 INLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSGT-VPTRIEVRGEVYFPVAD 186 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE---LPD 237 F NE G K F N RNAAAGSLRQ DP TAKRPL +G+G +E GE P Sbjct: 187 FAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGFVEAGEDFTEPI 246 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T +G Q + WGLPVS + + + ++ E R L +IDGVV+K+N L Q Sbjct: 247 TQMGWYEQLRDWGLPVSPYTRVLTGRKAIEERIAELGEKRHDLEHEIDGVVVKINDLDLQ 306 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG +R PRWA A+KFP +E T + D+ QVGRTG +TP +E V VAG V+ AT Sbjct: 307 RSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGVMESVLVAGSNVARAT 366 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHNA E+ R G+ IGD VV+R+AGDVIP++V V R R V PT CP CG+ + + Sbjct: 367 LHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPFVMPTECPSCGTTLVQ 426 Query: 418 V-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK----------- 465 EG+ RC +C AQ E L H +R A+DV+G+GD+ + + Sbjct: 427 EKEGDVDLRCPNKGLCPAQITERLAHVGARSALDVEGLGDESALAMTQPENDRDEVAAAL 486 Query: 466 --EYVHTPADLFKLTAGKLTGL-ERMGPKSAQNVV-----------NALEKAKETTFARF 511 + T D LT L A+ ++ AL + Sbjct: 487 VAGHSVTLEDGTVLTLEGGRELPHGEQITRAEELLPAPQAPALRTEAALFDLRAEDLRDV 546 Query: 512 LYALGIREVGEATA-AGLAAYFGT----------------------------LEALEAAS 542 + +++ GE T YF T L LE A Sbjct: 547 MVWKPVKKKGEETGDWKQVRYFWTKAYKPRKLRGQTVFEPIEPTASKGTEKMLVELEKAK 606 Query: 543 IEELQK------VPDVGIVVASHV-------------------------HNFFAEESNRN 571 + L + + VG A + + Sbjct: 607 SQPLARVLVALSIRHVGPTAARALAEKFLSMDALRAASVEELSAVEGVGEEIGRSLRDWF 666 Query: 572 VISELLAEGVHWPAPIVINAEEIDSPF----AGKTVVLTGSLSQMSRDDAKARLVELGAK 627 + L W V A+E P AG TVV++G++ R+ AK + G K Sbjct: 667 TVDWHLEVLQAWARAGVRMADEAPEPTSDVLAGLTVVVSGAMPGYDREGAKEAITSRGGK 726 Query: 628 VAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 GSVSKKT LV+AG AGSK AKA+ LG+ VI E + LL Sbjct: 727 AVGSVSKKTSLVVAGPGAGSKAAKAEALGVPVITEQQFTDLLE 769 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 292/576 (50%), Positives = 386/576 (67%), Gaps = 8/576 (1%) Query: 101 RLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH 160 + ++V + E KLDGLA S+ Y GVLV AATRGDG GED+T++ RTI+ +PL+L Sbjct: 178 AAEQPQRVEYVAEPKLDGLAFSLTYAEGVLVRAATRGDGQEGEDVTAHARTIQDVPLRLQ 237 Query: 161 GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPL 220 G PA LEVRGEV++P A FEK+N +AR G K FANPRNAAAGSLRQLDP+ITA R L Sbjct: 238 GAGYPALLEVRGEVYMPLATFEKLNAEARERGEKTFANPRNAAAGSLRQLDPKITASRGL 297 Query: 221 TFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTL 280 FCYG G +EGG L D + L K WGL VS E A+ LA+ ++ E R TL Sbjct: 298 RMFCYGTGYVEGGTLADRYAEILAALKGWGLRVSPEAERVEGAQGCLAYTERLGEKRETL 357 Query: 281 GFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPV 340 ++IDG V+KV+S +E+LGFVARAPRWA+AFKFPA E+ T V+ ++ QVGRTG ITPV Sbjct: 358 PYEIDGAVLKVDSQRLRERLGFVARAPRWAMAFKFPATEESTTVQAIDLQVGRTGVITPV 417 Query: 341 ARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR 400 ARLEPV V GV V+NATLHN E+ R +R+GD+V++RRAGDVIP+VV V+ E Sbjct: 418 ARLEPVAVGGVTVTNATLHNFLELARKDVRVGDRVIVRRAGDVIPEVVRVIPRESHGALA 477 Query: 401 EVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIID 460 P CPVCG+ ER GE RC+GGL C AQ KE +KHF SR+AM+++G+GDK++ Sbjct: 478 VYKEPVACPVCGAPTEREGGETALRCSGGLTCRAQVKEGVKHFASRKAMNIEGLGDKLVA 537 Query: 461 QLVEKEYVHTPADLFKLTAGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIR 518 L++ V +DL++L + L GLER+G KS N++ A+E++K + ARFL+ LGIR Sbjct: 538 LLMQAGLVERISDLYRLHEQRQVLVGLERLGGKSVANLLEAIEQSKAQSAARFLFGLGIR 597 Query: 519 EVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL- 577 +VG A LAA+F +L+AL AA++E+L + DVG VVA V +FFA+ + ++ L Sbjct: 598 DVGVTLAGSLAAHFTSLDALMAATVEDLVGIEDVGEVVARRVVHFFAQAHHGAELAALRA 657 Query: 578 -----AEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 A P + P +G +VVLTG+L+ ++R+ A RL LGAKV SV Sbjct: 658 LGVAAAGEPWRVEPDGHGVAAAEQPLSGLSVVLTGTLAGLTREAAAVRLEGLGAKVVASV 717 Query: 633 SKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRL 668 S KT ++ GE+AGSKLAKAQ+ G+ V+DEA + L Sbjct: 718 SGKTGCLVCGESAGSKLAKAQKAGVPVLDEAALEGL 753 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 13/166 (7%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 + ELR L H+ + YH +D + DAEYDRL REL+ LE P LI+ DSPT RVG A Sbjct: 5 RAAELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAI 64 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD--GLA--VS 122 L F ++RH V MLSLDN F + + F++RVQ+ L + V + D GL+ + Sbjct: 65 LEGFEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGLAESVVVE-AVQHYQDEYGLSDLGA 123 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL 168 ++ G L R D+T + + L + + L Sbjct: 124 LVGRPGAL-EGVAR-------DVTQRLNQTLSFVEPLQPPDTKSLL 161 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 246/699 (35%), Positives = 384/699 (54%), Gaps = 43/699 (6%) Query: 1 MESIE--QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M+ I+ ++ E TL + Y+ +D P D EYD L + ++ E + + I DSP Sbjct: 1 MQEIKSHEEYLESIKTLNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSP 60 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAF-------NKRVQD----------- 100 TQR+G L FS+ +H+ M SL+++F+ + RVQ Sbjct: 61 TQRIGDKILKDFSKNKHKKRMWSLEDIFNPSDLDEWLTKLSNAIARVQKTTLSPTLFDTE 120 Query: 101 -RLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL 159 ++ + + +C K DG+++++LYENG+L SA TRGDG GE +T N +T+ ++P + Sbjct: 121 TQIDSINNLAFCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLPHTI 180 Query: 160 HGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRP 219 +E+RGEV L + F ++N++ R +FANPRNAAAGS+RQLD +T +R Sbjct: 181 P---FKGSIEIRGEVVLSKENFARLNKEQERNNKALFANPRNAAAGSMRQLDSNLTRERN 237 Query: 220 LTFFCYGVGVLEGGELPDT-------HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHK 272 L+F +G+G ++ EL L+ ++G + +AE + Y K Sbjct: 238 LSFVAWGIGSVDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV-NAESIEREYQK 296 Query: 273 VEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVG 332 + DR F +DG VI ++ LA Q++LGF +APR+A A+KFPA E + + + QVG Sbjct: 297 ILNDRDNYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQVG 356 Query: 333 RTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL 392 RTG ITPVA +P + G +S ATLHN EI++ +RI D ++ R+GDVIP++ V+ Sbjct: 357 RTGIITPVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVLH 416 Query: 393 SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVD 452 R D ++ PTHCP+C ++ + CT C A K L HF S++ MD+D Sbjct: 417 ERRKGDEIKIAKPTHCPICSHELSYE--DIYIYCTNP-NCDAIIKAKLIHFASKKCMDID 473 Query: 453 GMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKA-KETTFARF 511 G+G II+ LV+ + D++ L E K AQN++NA++ + + F RF Sbjct: 474 GLGSSIIELLVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWRF 533 Query: 512 LYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRN 571 ++ALGI +GE + LA+ +G + IE+LQ++ G +A ++F + Sbjct: 534 IHALGILHIGEVASKKLAS-YGY--EIFDYDIEKLQEIEGFGKDMAQSFYDFCIHNKDFI 590 Query: 572 VISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGS 631 + + + I DS F KT V+TG+ + +SRD KA+L LGAKV+ S Sbjct: 591 NEMQEILKPQLQVKTTQI---NTDSIFYQKTCVITGTFA-LSRDSIKAKLESLGAKVSSS 646 Query: 632 VSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 +S KTD +IAGE AGSKL KAQELGI++I+ +E++++L Sbjct: 647 ISTKTDFLIAGEKAGSKLTKAQELGIKIIESSELMQILE 685 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 216/662 (32%), Positives = 368/662 (55%), Gaps = 14/662 (2%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 +LR L + Y Y+ D +I D +D+ + EL LE K+PE P SPT ++GA Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYPEFYDPTSPTIKIGAEIHEP 86 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 + H+ M SL + ++ + + K++ + ++ CELK DG++++++Y+NG Sbjct: 87 STVFYHKYKMYSLQKTYSKKELIIWKKKISKSI---HTFSFVCELKYDGVSINLIYKNGF 143 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 L +A TRG+G GED+T N++TI+ +PLKL G N PA LE+RGEVFL F +IN+ Sbjct: 144 LTNAGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRI 203 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 ++G +ANPRN A+G+L+ D + +R L + V DT L K W Sbjct: 204 KSGKTPYANPRNTASGTLKIQDRKKVRQRNLFCIAFHVVGKNLP--FDTQYESLKHIKNW 261 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 G + + C++ EEV F + L + IDG+VIKVN +Q LGF + PRW Sbjct: 262 GFQIPETARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIKVNEYQKQSLLGFTNKYPRW 321 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 A+A+KF + T + + FQVGRTG +TPVA + P+ ++G ++ L+N I+++G+ Sbjct: 322 AIAYKFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMGI 381 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 GD +++ + G++IP+V + + +R V F CP C S + + + CT Sbjct: 382 YHGDTLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKKCPSCNSVLTK--NNELFYCTN- 438 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 C +QR E ++HFVS +AM++ +G+++I +L +K ++++ +L++L +L ++ + Sbjct: 439 QNCFSQRIEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGVK 498 Query: 490 PKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKV 549 K A +++N ++K+KE F+R LYALGIR VGE + L F + +L A+ + L + Sbjct: 499 EKLADSIINNIKKSKENPFSRVLYALGIRHVGEDISKKLTKQFLDINSLMHANYDHLISI 558 Query: 550 PDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 +G + + +F+ NR+ + L+ G+H+ + S GK+ V TG L Sbjct: 559 SGIGKKITESIITYFSIYENRHAVQMLIKYGLHF-----SKCSKKLSSLEGKSFVFTGKL 613 Query: 610 SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG-IEVIDEAEMLRL 668 S M+R A+ + LG KV +V+ + + ++ G+ GSK K+ + ++++ E L + Sbjct: 614 SCMTRHKAQNMVENLGGKVYNTVNNQINFIVIGKNFGSKFKKSMKKNHVQILTENLFLDM 673 Query: 669 LG 670 L Sbjct: 674 LK 675 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 242/664 (36%), Positives = 352/664 (53%), Gaps = 7/664 (1%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR-VGA 64 ++L LR + H+ LY PEI DA+YD L +ELRELE++ + D R +G Sbjct: 45 RRLELLRVEIARHDDLYFRKAQPEISDADYDALKQELRELESRFGRRVPRDPAALRDMGD 104 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 ++ F + RH + MLSL+ E AF++ ++ +K ++ + E K DGLA+S Sbjct: 105 DRVSGFPKARHRMRMLSLEKTTTESGVRAFDQALRRLVKPPAEIAYVVEPKFDGLAISAT 164 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YE G LV TRG+G G+D+T+ IR +P +L G P +EVRGEVFL A FE+I Sbjct: 165 YEEGRLVRLVTRGNGEEGDDVTAAAGRIRTLPPRLAGAAWPRVVEVRGEVFLTFAEFERI 224 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N R G F++PRN A G+L+ L+P R L +G+G ++G P + L Sbjct: 225 NRGRRENGRPTFSSPRNLAVGTLKSLEPEDREVRQLDVVFFGLGAIDGHAAPASQTQLLE 284 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +WGLP + +S ++ ++ R L F IDG VIK++ Q G Sbjct: 285 WIAQWGLPSVEDARRVDSIDDAWRAVQELGGRRSHLAFPIDGAVIKLDDAVGQTAAGVSE 344 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 APRWA+AFK+ T VR V QVGRTG ITPVA LEPV +AG ++ ATLHNA E+ Sbjct: 345 VAPRWAIAFKYAPARVGTRVRGVALQVGRTGVITPVAELEPVALAGARITRATLHNASEM 404 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ER LR+GD V I R G++IP VV V ++R + VFP CP CG+ + R +A Sbjct: 405 ERSDLRVGDFVWIERMGEIIPAVVAVDTAQRGTVSAPFVFPRDCPGCGALLVRALDDANW 464 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 RCT C A++ ++H+VS + + G+G ++ LV + V DL+ LTA ++T Sbjct: 465 RCTND-DCPARQVRKVEHYVSDEGVGIRGLGAASVEALVRSQRVREIPDLYTLTAAEVTA 523 Query: 485 LERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE 544 R+ A VV+A++++++ R + LG+ +G A A L A F L AA Sbjct: 524 HTRLSAAQAARVVDAIQRSRKAPLRRVIAGLGLPGIGPAGANALGARFADLPQFAAARES 583 Query: 545 ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVV 604 +LQ+V + + + E + L + +A AGK VV Sbjct: 584 DLQQVEGLRPESVRALATALSAERT-----QQLLARLAAAGVGAQSATADAGTLAGKEVV 638 Query: 605 LTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAE 664 TG+L +SR A + E G +VA V+ T ++AG SKL +A LG+ VI+EAE Sbjct: 639 FTGTLPTLSRRRATELVEEAGGRVADRVTAATWRLVAGRNPASKLHQATALGVPVIEEAE 698 Query: 665 MLRL 668 +LRL Sbjct: 699 LLRL 702 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 247/670 (36%), Positives = 363/670 (54%), Gaps = 12/670 (1%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 +L ELR + H+ LY+ APEI DA+YD L REL LE +P+L +G Sbjct: 54 RLVELRAEIARHDDLYYRKAAPEISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDR 113 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 + RH PMLSL+ + EE+ L+F RV +L E++ E K+DG+A+S+LYE Sbjct: 114 SGVRGEFRHFAPMLSLEKAYTEEALLSFYDRVLSQL-TFEELDCLVEPKVDGMAISVLYE 172 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G V A +RG+G GED++ NV I +P +L E+ P R+E+RGEV++ GF ++NE Sbjct: 173 RGEFVRAVSRGNGRVGEDVSENVLRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNE 232 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-GELPDTHLGRLLQ 245 G + FA+PR+ AAGSL+ DP + ++R L+ +G G E E P+T G Sbjct: 233 ARVAAGEEPFAHPRSLAAGSLKLDDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGL 292 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 + WG+PV + + E +LA ++EE R F +DG V+K++ Q +LG Sbjct: 293 AQSWGIPVLEELRKTRGTEALLAAVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTS 352 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 APRWA+A+KF + T + + QVGRTG +TPVA LE + + G + A+LHN IE Sbjct: 353 APRWAMAYKFAEKRVETRLLGIRIQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIE 412 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 R+ LRIGD V + RAG+VIP VV V L++R + + VFP CP CG E EG Sbjct: 413 RMDLRIGDVVYLERAGEVIPNVVGVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERY 472 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C AQ + ++HF S RA+ ++G+G I L++ V T ADL+ L L Sbjct: 473 CR-SSTCPAQAQRKIEHFASSRAVGIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQA 531 Query: 486 ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEE 545 A+ +V+ + ++ + R L+ LGI EVG + + LAA +G L A AS + Sbjct: 532 GVGSEAVARKLVSEISGSRAASLWRVLFGLGIPEVGVSRSKKLAAAYGDLAAFARASALD 591 Query: 546 L-----QKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 G V V + + + NR +I L+ G+ + ++ E AG Sbjct: 592 FSPGGRAAEVGFGPVAREAVLAYLSLDENRELIGRLVELGLGARSEVMDTRSE----VAG 647 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660 V TG+L +SR +A A + GA+ +VS D ++ G+ G+KL KA+ELG+EVI Sbjct: 648 TIFVFTGALEGLSRKEAMALVEAAGAETRSAVSSACDFLVVGKEPGAKLQKARELGVEVI 707 Query: 661 DEAEMLRLLG 670 + RLLG Sbjct: 708 GLEKFRRLLG 717 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 220/679 (32%), Positives = 362/679 (53%), Gaps = 30/679 (4%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ + +L +RHH+YLY+V + PEI D ++D+L + LR+LE + P+ +SPT Sbjct: 15 KEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEFPQFKDLNSPTLV 74 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG+ F + +H++P+LSL N ++++ L + + + + E K+DG ++ Sbjct: 75 VGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNK------TDPDGLYSVEWKIDGASI 128 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + YENG+L + TRG G G+D+T N+RT+R IPL+L P + +RGEVF+ F Sbjct: 129 VLYYENGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPE---PITVYLRGEVFMTFKDF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E+ NE +ANPRN +AGS++Q + TAKRPL F Y + TH Sbjct: 186 EEFNE----LSSGKYANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQ 241 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + +K PV ++ + ++ + TLGF DG+VIK+N +++++ G Sbjct: 242 ILSKLEKLTFPVPPDTVFVNGSK-IAETIKDFKKKKDTLGFPTDGLVIKLNDISKRDAQG 300 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + + +PRWA A+KF A + + + D+ + VGRTG ITP +EPV++AG V+ ATLHN Sbjct: 301 YTSHSPRWARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQ 360 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 D I+ LG+ IG V + + G++IP V V+ P +CP C + + E Sbjct: 361 DYIDELGVGIGAIVRVAKRGEIIPAVEEVI----TPGKDVFKIPDYCPSCKTKTIKKENL 416 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--A 479 C C + K + + R+ MD++G+GDK I+ L + Y+ + ADL+ L Sbjct: 417 VDLFCPNP-DCPDRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQK 475 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEAL 538 KL E G KS + N +E +K+ F L ++G+ E+G L + +++ + Sbjct: 476 EKLIEEEGFGEKSLAIIFNGIEHSKQKDFRFLLPSIGLPELGHKVTELLIEHGIDSIDEI 535 Query: 539 EAASIEE-----LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEE 593 + + ++ L ++P +G F+++ +I+ L G+ A + +++ Sbjct: 536 LSIAKDKKRISSLLEIPGIGPSTIKAFEENFSDKRILKLIARLKNAGLKLKADPIKVSDQ 595 Query: 594 IDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKA 652 PFAG++ +TGS RD A +V G + +VS KT ++AG AGSKL KA Sbjct: 596 --QPFAGQSWCVTGSFENFQPRDKAMDLVVYYGGRKVSAVSSKTTHLLAGPGAGSKLEKA 653 Query: 653 QELGIEVIDEAEMLRLLGS 671 ELGI V +E + L LL S Sbjct: 654 NELGIVVYNEKQFLDLLKS 672 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 226/676 (33%), Positives = 363/676 (53%), Gaps = 21/676 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PDS 57 E I ++ EL+ + + Y+ +DAP + DA YDR + +L++LE ++ + +S Sbjct: 5 EKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANS 64 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 PTQ++ A F ++ H+ PMLSL+ + EE F ++ ++ E K+D Sbjct: 65 PTQKINAKSSDLFKKVTHDSPMLSLNKAYTEEEIQKFIDNIKKV---TPTFSFFLEPKID 121 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GL++SI Y NG L A TRGDG GED+T N++ I+ IP ++ + LEVRGEV+L Sbjct: 122 GLSISIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAYQKP---LEVRGEVYLA 178 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 + FEKIN + ++ + ANPRNAAAG+LRQLD I A R L+ F Y + E + Sbjct: 179 LSEFEKINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPEDHNIF- 237 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 T L K G V+ T + E+ ++ + + TL ++ DGVVIK+N L Sbjct: 238 TILEARDFLKNLGFSVTKEATYAKDLSEINSYIENFKHLKKTLDYETDGVVIKLNELQHY 297 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG + P A+AFK+ T ++++ VGRTG +T A LEPV ++G ++ AT Sbjct: 298 DALGATNKFPHSAIAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILSGSCITFAT 357 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N I+ L L GD V I++AG++IP V+ +V + + E CP C SD+ Sbjct: 358 LNNYQYIKDLKLNKGDLVYIKKAGEIIPCVIGLVNKKH--EETEFNKFLKCPYCNSDLIE 415 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C+ C R++ + HF S++AM+++ +G+K ID + + + D +KL Sbjct: 416 TDTLLEQYCSN-ENCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLENVIDFYKL 474 Query: 478 --TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 K+ LER G KS N++ ++E++K+ + R ++ L I+ +G A LA+ L Sbjct: 475 KEKKDKIMSLERFGTKSVMNILKSIEESKKNSLDRVIFGLSIKHIGSKVAYFLASKILKL 534 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 + L ++G + S + N+ A+E N+N++ +LL V E Sbjct: 535 SNFLDFDFDSLISYNEIGEKIISSLKNWVAKEENKNLVKDLLDNDVDLEFIATKKTE--- 591 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQEL 655 FA + V+TG+LSQ R + + E G ++ +VS KT ++ GE AGSKLAKA+ L Sbjct: 592 -RFAQLSFVITGTLSQ-PRSHFEKLIKENGGSISSAVSAKTSYLLVGEDAGSKLAKARAL 649 Query: 656 GIEVIDEAEMLRLLGS 671 ++++DE LL S Sbjct: 650 NVKILDEEAFNELLVS 665 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 222/672 (33%), Positives = 358/672 (53%), Gaps = 20/672 (2%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I++++ EL L Y+ + P + D EYD+ ++EL +LE K+P+ I +SPTQ++ Sbjct: 9 DIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNSPTQKL 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G+ F ++ H+ PMLSL +D + ++ L E + + E K+DGL++S Sbjct: 69 GSFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIEK-LVPIEDINFSIEPKIDGLSIS 127 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y +G L A TRGDG GED+T N+ I +IP + N A LEVRGEVFLP+A F+ Sbjct: 128 LHYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKII---NYDAELEVRGEVFLPKAEFQ 184 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++NE+ + G K F+NPRNAA+G+LRQLDP I R L F Y + + + T Sbjct: 185 RLNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVEPQKHNIT-TQEQA 243 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 L F+K +P + + E E A E + L +D DG+VIK+N+L ++G Sbjct: 244 LEFFQKLNIPTNPYHKVVEVEELEEA-ISFFAEMKNKLNYDADGLVIKLNNLTYWNKMGK 302 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 A+ P+ ++AFK+ + ++ ++D++ VGRTG IT VA LEPV + +V ATLHN + Sbjct: 303 TAKFPKHSIAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQTIVRAATLHNYN 362 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 IE L + I D+V I +AG++IP+V+ +V + CP CGS + +E Sbjct: 363 FIEDLNININDQVQIVKAGEIIPKVLALVKKQSKG---VFGKTLECPSCGSVLVEIEDNV 419 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TAG 480 C C ++ HF SR+++++ G+G + + V + D+F L Sbjct: 420 DQFCVNK-NCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIFNLHKHKD 478 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L LER N++ + KAK++TF++ L+ALGI+ VGE A ++ + + L Sbjct: 479 ELLKLERYAELKVNNLLTNIGKAKDSTFSKVLFALGIKHVGERAAKLISKQYHNFDELIC 538 Query: 541 ASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 E ++ + ++G + + + E N ++ + + V + + Sbjct: 539 EKDELAKISAINNIGPKILDSLKEYLKNEENVKLLRKFDEIFNYQKIATVASEK-----L 593 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 + V+TG LS SRD + G KV+ SVS KT ++ GE AGSKL KA++L I Sbjct: 594 INLSFVITGKLSN-SRDHYVDLVEANGGKVSSSVSSKTSFLLVGEDAGSKLDKAKKLNIA 652 Query: 659 VIDEAEMLRLLG 670 +I+E + +L Sbjct: 653 IINEEQFNEMLK 664 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 261/796 (32%), Positives = 378/796 (47%), Gaps = 129/796 (16%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ +++ ELR + + Y+ D+P + DAEYD + EL LE HP L TP+SPTQR Sbjct: 14 QAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAHPALATPESPTQR 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A + F+ + H MLSLDNVF + ++ RV L + V + E+K+DGLA+ Sbjct: 74 VGGAAASGFTTVEHVERMLSLDNVFSVDELRDWDARVARDLGAGD-VGYLAEVKIDGLAI 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++LYE+G L AATRGDG TGED+T N I +P +L GE PA +EVRGE+F+P A F Sbjct: 133 ALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEVRGEIFIPTASF 192 Query: 182 EKINEDARRTGG---------------------------KVFANPRNAAAGSLRQ-LDPR 213 ++NE FANPRNAAAG LRQ LD + Sbjct: 193 TRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAAAGGLRQQLDKK 252 Query: 214 ITAKR--------PLTFFCYGVGVLEGGELPDT----HLGRLLQFKKWGLPVSDRVTLCE 261 +R L + +G+G L+ F WGLPVS + Sbjct: 253 DGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWGLPVSPHNRVVN 312 Query: 262 SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQM 321 + V+ R + ++DG+V+KV++L Q++LG +RAPRWA+A+K+P +E Sbjct: 313 GIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRWAIAYKYPPEEVN 372 Query: 322 TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAG 381 T + ++ VGRTG TP A +EPV VAG V ATLHN D + G+R+GD VV+R+AG Sbjct: 373 TRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGVRVGDVVVLRKAG 432 Query: 382 DVIPQVVNVVLSERPE--DTREVVFPTHCPVCGSDVE-RVEGEAVARCTGGLICGAQRKE 438 DVIP+++ V + + + V P CP CG+ + EG+ RC C AQ + Sbjct: 433 DVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRCPNARSCPAQVRG 492 Query: 439 SLKHFVSRRAMDVDGMGDKIIDQLVEK-----EYVHTPADLFKLTAGKLTGLERM----- 488 ++H SR +DV+G+G+ L + + T A LF LT +L + + Sbjct: 493 RVEHIGSRGGLDVEGLGEVAAAALTQPLEPADPPLDTEAGLFSLTIEELLPIRVVVRDPE 552 Query: 489 --------------------GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 G VV ++ E T+ + E +A Sbjct: 553 TGLPRPYDGVGESAELPTADGATFTAKVVRPFQRLVERTYPPGTETMTPAERRKAGIRKD 612 Query: 529 AAYFG-------TLEALEAASIEEL------QKVPDVGIVVASHVHN------------- 562 +G L+ L+ A ++L + VG V A + + Sbjct: 613 HPVYGPAKSAQVLLDELDRAKTKDLWRQLVSLNIRHVGPVAARALADWFGSLDAIRAASS 672 Query: 563 -------------------FFAEESNRNVISELLAEGVHWPAPIVINAEEI--------- 594 +F + + +++ GV + P E + Sbjct: 673 EELAAVEGVGPVIGAELQAWFDVDWHVDIVDSWTRAGVRFATPGHPGPEAMAAQAAAGAA 732 Query: 595 -DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQ 653 P AG TVV+TGSL +RD AK ++ G K AGSVSKKTD V+ GE AGSK AKA+ Sbjct: 733 PQGPLAGLTVVVTGSLDGFTRDGAKEAIIAAGGKSAGSVSKKTDYVVVGENAGSKAAKAE 792 Query: 654 ELGIEVIDEAEMLRLL 669 ELG+ V+DEA + LL Sbjct: 793 ELGLPVLDEAGFVALL 808 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 206/676 (30%), Positives = 357/676 (52%), Gaps = 21/676 (3%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PD 56 +E I +++ +L+ + + Y+ +D+PE+PD YD +L+ LE K+ + + Sbjct: 7 IEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELKN 66 Query: 57 SPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKL 116 SPT+++ A F +++H+ PMLSL+ + + F ++ ++ E K+ Sbjct: 67 SPTRKINALASDLFKKVKHKRPMLSLNKAYSLDEIQKFIDNIKK---ITSDFSFFIEPKI 123 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DGL++SI+YE+G LV A TRGDG TGED+T+NV + IP + LEVRGEV+L Sbjct: 124 DGLSISIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTI---EYKESLEVRGEVYL 180 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 + FEK+N + ANPRNAAAG+LRQL+ +I +R L+ F Y V + Sbjct: 181 AISDFEKLNLKLGQENKNKLANPRNAAAGTLRQLNSQIIKERNLSAFLYYVVDPLQHNI- 239 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 T K +G PV+ V + +++ + + + + ++ DGVVIK+N + Sbjct: 240 KTMQEEHEFLKTYGFPVTHEVQHANTLQDIEEYIRNFKNQKLLIDYETDGVVIKLNEVQY 299 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++LG A+ P +A+AFK+ + T ++ + VGRTG +T A LEPV ++G LVS A Sbjct: 300 FDKLGSTAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVEISGSLVSFA 359 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TL+N I+ L L D V I++AG++IP V+ ++ ++ D CP C + + Sbjct: 360 TLNNFQYIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDH--FQKVEFCPYCHNKLV 417 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 E C+ C ++ L HF S+ +D++ MG++ ID ++ + P D+F Sbjct: 418 DSETGLEQFCSNDQ-CPEIQRRKLIHFCSKDGLDINTMGERNIDLFLKNSLISNPIDIFN 476 Query: 477 L--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L L L RMG KS +N++ ++++ K + + AL I +G A +A+ + Sbjct: 477 LKNKKQDLLKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLAKFVASKIKS 536 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 L L +L ++G + + + ++ + + N+ ++ +++ G E I Sbjct: 537 LHNLLNYDFSQLIDYHEIGDKIINSIISWISNDFNKKLVEDIINLGYDLKDE----NESI 592 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 + K+ V+TG+L R + + + G + S+S KT+ ++AGE AGSKL KA + Sbjct: 593 TNLLENKSFVITGTLGH-PRSYFERLIEKNGGLIHSSISSKTNYLLAGENAGSKLQKANK 651 Query: 655 LGIEVIDEAEMLRLLG 670 L I +I E ++ +++G Sbjct: 652 LNITIITEEDLFKMIG 667 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 273/639 (42%), Positives = 349/639 (54%), Gaps = 79/639 (12%) Query: 1 MESIEQQ--LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 M + + + L + H+ YH DAP I DAEYD L R L +E + PEL + Sbjct: 14 MTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGAA 73 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNN--EKVTWCCELKL 116 + VGA F+++RH VPMLSL N F EE F +RV+ L E + + E K+ Sbjct: 74 SVSVGAKASDKFAKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPKI 133 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFL 176 DGL++S+ YE G LV+AATRGDG GED+T+NVRTIR IP +L G+++P EVRGEV+L Sbjct: 134 DGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVYL 193 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 A F IN G +FANPRNAAAGSLRQLDP ITA RPL FF Y G + Sbjct: 194 SHADFAAINARQEEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAGEMSSW-PA 252 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 +T G + F+++GLPV+ R C S E+LA Y +E +R LG+DIDGVV KV+ A Sbjct: 253 ETQSGLIGAFRRFGLPVNPRTKRCTSVAEMLAHYRAIETERAELGYDIDGVVYKVDEFAL 312 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q +LGFVARAPRWA+A KFPAQ +T + +E VGRTG++ P+ARL+PV V GV+VSNA Sbjct: 313 QRRLGFVARAPRWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGGVVVSNA 372 Query: 357 TLHNADEIE-------------------RL----------GLRIGDKVVIRRAGDVIPQV 387 TLHN D I RL +R+GD VV+ RAGDVIP+V Sbjct: 373 TLHNEDYIRGIDADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAGDVIPKV 432 Query: 388 VNVVLSERPEDTREVVFPTHCPVCGSDVERVEG------EAVARCTGGLICGAQRKESLK 441 +VVL RP D FP CP CGS R ++V RCTGGLIC AQ +E L+ Sbjct: 433 ADVVLERRPADAVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQGQERLR 492 Query: 442 HFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL---------------- 485 HFVSR A D++G G+ I L E V PADLF+L L Sbjct: 493 HFVSRNAFDIEGFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSAERALAA 552 Query: 486 ------------ERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 K+ N++ A+E + RF++ALGI +VGEATA LA +F Sbjct: 553 GKTPEAKKAKPKANEEDKAIHNLLAAVEARRTIPLNRFIFALGIEQVGEATAKALAKHFP 612 Query: 534 TLEALEA-----------ASIEELQKVPDVGIVVASHVH 561 + AL EL +P VG + Sbjct: 613 DMPALMEGVRAAAACRPGPDWIELASLPRVGPTTRERLL 651 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 38/249 (15%) Query: 448 AMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG--------------KLTGLERMGPKSA 493 A+ ++ +G+ L D+ L G +L L R+GP + Sbjct: 593 ALGIEQVGEATAKALA-----KHFPDMPALMEGVRAAAACRPGPDWIELASLPRVGPTTR 647 Query: 494 QNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPD-- 551 + ++ A E + L + + A L A +G + L A L++ P Sbjct: 648 ERLLAAAEAGET----DLLADGAVTRLTSAQKEALLAAYGDRDGLRNAVERALRQKPGDA 703 Query: 552 ---------VGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +G V + + FF+E N + LL E + F+G+T Sbjct: 704 YRHLADDSEIGAVTTASLIEFFSEAHNVEAVEALLREVR----TERAGTPAAAAVFSGQT 759 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV TGSL +M+R +AKA LGAKV+GSVS KTDLV+AG AGSKL A++ G+ VI E Sbjct: 760 VVFTGSLERMTRSEAKATAERLGAKVSGSVSAKTDLVVAGPGAGSKLKDAEKHGVRVISE 819 Query: 663 AEMLRLLGS 671 AE L ++ + Sbjct: 820 AEWLAMVEA 828 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 211/673 (31%), Positives = 353/673 (52%), Gaps = 20/673 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I + +L+ + Y D P + D+ YD + +L + E ++ L DSPT+ Sbjct: 14 NRIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKN 73 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GA FS+++H+ PMLSL+ + + F + + L + ELK+DGL++ Sbjct: 74 IGAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINK-LGFFPN--YFLELKIDGLSI 130 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y+NG L+ A TRGDG +GED+T NV I+ IP ++ +E+RGE++L ++ F Sbjct: 131 SLKYDNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKYSKP---IEIRGEIYLSKSTF 187 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +INE + +FANPRNAA+GSLRQLD I +R L F Y V ++ + + Sbjct: 188 YEINECQKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHKIKNFNDQ 247 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED--RPTLGFDIDGVVIKVNSLAQQEQ 299 L K+ V ++ E+ F E++ R L ++IDG+V+KV+ + + Sbjct: 248 EL-FLKENNFQVPSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDDFSLYDI 306 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG ++ PR +AFKF T + D+ VGRTG IT A LEPV + G LVS ATLH Sbjct: 307 LGQTSKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAATLH 366 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N + +E L L D V I +AG++IP+VV++ + +C C + + E Sbjct: 367 NYEYVESLKLNKNDNVKIIKAGEIIPKVVSL---SKKNSETIFKRIEYCTSCNEKLVQPE 423 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 E C C R ++HF S++AM++ G+G + I++ + + +DLF L Sbjct: 424 DEVDQYCINK-KCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLFFLEK 482 Query: 480 GK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 K + G KS N++ ++ ++K + +F++A+GI+++GE +A +A L Sbjct: 483 YKNLIESQPSFGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVKLLSN 542 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 L E+L + D+ + + FF++E+ I +L G+ + + E Sbjct: 543 LINFDFEKLNNIRDISCKTINSLKCFFSDENEIEEIKIILELGLDFKN---LENEFESKK 599 Query: 598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELG- 656 G V+TG+LS+ RD K +++ G V S+S + + ++ GE +GSK+ KAQ++ Sbjct: 600 LQGLNFVITGTLSK-PRDFFKELIIKNGGNVLNSISNRINYLLTGEKSGSKIEKAQKINT 658 Query: 657 IEVIDEAEMLRLL 669 I+++DE E +L+ Sbjct: 659 IKILDENEFNKLI 671 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 235/688 (34%), Positives = 353/688 (51%), Gaps = 47/688 (6%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 IEQ++ +LR + H+ LY P I D+EYD++ EL LE KHPE +SPT+R+ Sbjct: 2 IEQKIKQLREEVMKHDLLY-DEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIY 60 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + + + +I+H PMLS D EE + F + D + + K DGL + + Sbjct: 61 SVVVDSLKKIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGD--------KEDGLTIVL 112 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 Y NG+ A+TRGDG GED+T VRTI +P K+ LEVR E +P + FE+ Sbjct: 113 KYNNGIYYEASTRGDGYIGEDVTHTVRTITNLPKKIS---FKGYLEVRAESVIPFSEFER 169 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 IN D + +PRN +GS+R L+ I +R L+ + + EG +L Sbjct: 170 INVD------GKYKSPRNLVSGSVRTLNANIAKERGLSIIAFDLVKAEGITFEKD-TEQL 222 Query: 244 LQFKKWGLPVSDRVTLCESAEEVLAFYHKV----EEDRPTLGFDIDGVVIKVNSLAQQEQ 299 K+ G V + E + +E RPT+ IDG+V+K N+LA +E Sbjct: 223 EFLKEQGFNVVPYKVFKNTPEGIKELIQYCLTYNKEVRPTIPHMIDGLVLKFNNLAVRES 282 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 LG+ ++ PRW AFKF + + T + ++ VG++G ITP EPV + GV + A+L Sbjct: 283 LGYTSKFPRWGFAFKFDSLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASLA 342 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 N D I+ +RIGD +V+ RA DVIPQ+V+ V R +E++ PT CPVC +V + E Sbjct: 343 NYDNIKERDIRIGDTIVVARANDVIPQIVSAVTELRDGTEKEILPPTCCPVCKGEVVKEE 402 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 C C AQ++ LKHFVSR AM++DG+G K ++ EK + + +D++ L Sbjct: 403 DNVHYFCINS-TCSAQQERILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLKD 461 Query: 480 --GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 KL+ L G K Q +++ +E++K ++FLYAL I VG +T +A F T+ Sbjct: 462 NLDKLSVLRGFGEKKIQKMLSGIEESKHVPLSKFLYALAIPNVGSSTGKDIAKKFKTMRH 521 Query: 538 LEAASIE------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 L S + EL K+ +G VAS + ++F E N +I L + G + Sbjct: 522 LIELSKDPVVLKTELMKIDGIGETVASSMVSYFEESHNIELIEFLYSIGFTMMEEVEEII 581 Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG--------- 642 + GK V+TGSLS+ R+D K + G KV+GSVS KT+ ++ G Sbjct: 582 ASEEI--EGKIFVITGSLSK-PRNDIKKEIEARGGKVSGSVSAKTNFLVLGGYNHVTGEL 638 Query: 643 ---EAAGSKLAKAQELGIEVIDEAEMLR 667 E SK A + +I E E+ Sbjct: 639 PEKETNSSKYKNAVKFECPIISEEELFA 666 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 222/545 (40%), Positives = 320/545 (58%), Gaps = 13/545 (2%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ++ + L L H+ Y+V P I D EYD+L+++LR +E +HP + SPTQR Sbjct: 4 DTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSPTQR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK----VTWCCELKLD 117 VG +P+++F ++ EVPMLSLDN +DE F++RV L + V + E K+D Sbjct: 64 VGHSPISSFPKVVREVPMLSLDNTYDESELADFHQRVLRGLGLSGDEAGAVNYVVEPKID 123 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 G+ V + YE G TRGDG GEDI+ N+RT+R +PL+L E L VRGE F+ Sbjct: 124 GIGVELSYERGAFRLGTTRGDGRVGEDISQNLRTLRGLPLRLREE---VDLIVRGEAFMT 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 +A F +NE G + F NPRN AGSL+QLDPR+ A+RP+ Y V + G Sbjct: 181 RADFTALNEARAEAGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEV--VGGERFAR 238 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H L + ++ GLP S+ + +S + E R L FD+DG+VIKVNS Q+ Sbjct: 239 EHFEVLARLRELGLPTSEHNSRADSWAALKREVAAWAERRAELPFDVDGLVIKVNSFDQR 298 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG ++ PRWA+A+KFPAQ+ T + D+E VGRTGA+TPVA L PV V+G V A+ Sbjct: 299 DALGTTSKFPRWAIAYKFPAQQVTTVIEDLEVNVGRTGAVTPVAMLTPVEVSGTTVQRAS 358 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN D+IERLG+ D+V++ +AG++IPQV+ VV + P+ CP CG + + Sbjct: 359 LHNWDQIERLGIGPKDRVLLEKAGEIIPQVIAVVER---ASEQVFPRPSTCPSCGHGLIQ 415 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 G C L C Q SL+ F R M++DG+G+K+ L++ V ADLF L Sbjct: 416 EPGRVALLCPNRLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLVSNVADLFAL 475 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKE-TTFARFLYALGIREVGEATAAGLAAYFGTLE 536 + L LER G +SAQN+V+A+ +A++ TF+R L ALG+ +G A +AA++ ++ Sbjct: 476 SKEDLLTLERFGEQSAQNLVDAIARARDSATFSRLLAALGVAHIGGVAARAIAAHYPDMD 535 Query: 537 ALEAA 541 AL A Sbjct: 536 ALLAL 540 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 4/128 (3%) Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 + L ++ VG ++AS + +F + R V+ L GV+ P + +GK + Sbjct: 625 DVLGEIEGVGRIMASSLESFLRDPEAREVLRLLRERGVNPREPAT--EVTGEGVLSGKRL 682 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDE 662 V+TG+LS+ R D K + G KV GSVSK+T ++AG GS KLA A++ G+ VIDE Sbjct: 683 VITGTLSR-PRSDIKKAIEAAGGKVTGSVSKQTAYLVAGADTGSAKLASAEKYGVPVIDE 741 Query: 663 AEMLRLLG 670 A + LL Sbjct: 742 AALDALLA 749 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 261/608 (42%), Positives = 346/608 (56%), Gaps = 38/608 (6%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++L L L H+ YH DAP I DAEYD L R ++E + P L+ +SP+ RV Sbjct: 13 QAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNSPSMRV 72 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAV 121 GAA FS + H VPMLSLDN F + F+ R++ L+ NE V + E K+DGL+ Sbjct: 73 GAARAEQFSPVEHGVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKIDGLSA 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI-----PARLEVRGEVFL 176 S+ YE GVLV ATRGDG GED+T+N+RTI IP +L G + P +E+RGEV++ Sbjct: 133 SLRYEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIRGEVYV 192 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 F N A G + +ANPRN AAGSLRQ+DP+I+A+RPL FF Y G+ G Sbjct: 193 ELEAFAAFNAAALEAGQRTYANPRNFAAGSLRQIDPKISAQRPLRFFAYAWGLTSEG-FA 251 Query: 237 DTHLGRLLQFKKWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 T L + + WG + + A+ +L Y K E +RP L FDIDGVV KV+ L Sbjct: 252 ATQWEALGKLRDWGFVTTAPPAERVQDAQGLLDIYAKFEVERPKLAFDIDGVVYKVDDLE 311 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 QQ +LGFV+R+PRWA+A KFPAQ+ T + ++ QVGRTGAITPVARL+PV V GV V+N Sbjct: 312 QQRRLGFVSRSPRWAIARKFPAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGVSVTN 371 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG--S 413 ATLHNADEI R +RIGD V+++RAGDVIPQ+V VL ERP FPTHCP C + Sbjct: 372 ATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLEERPAGAVPFEFPTHCP-CHLET 430 Query: 414 DVERVE-----GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 + R V RC+G C QR E L+HFVSRRA D++G+G+K + E+ ++ Sbjct: 431 PLVRESTAAGAETVVRRCSGEFACPFQRIEHLRHFVSRRAFDIEGLGEKQLAAFFEEGWI 490 Query: 469 HTPADLFKL-----TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 PAD+FKL +L + G S N+V +E + R +Y LG+R++GE Sbjct: 491 KEPADIFKLARDEAKLAELRERDGYGETSVANLVKGIEARRTIGLDRVIYGLGMRDIGET 550 Query: 524 TAAGLAAYF------GTLEALEAASIE-----------ELQKVPDVGIVVASHVHNFFAE 566 T+ LA F G E L+AA+ EL P VG + Sbjct: 551 TSTVLARNFASPKGKGGFEDLQAAAERAAGQLPGAVYLELAGAPGVGPKARDELVEAGKG 610 Query: 567 ESNRNVIS 574 + Sbjct: 611 GLKADPWP 618 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 21/207 (10%) Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYAL------GIREVGEATAAGLAAYFGT 534 +L G +GPK+ +V A + + +L + ++ + LA +G Sbjct: 589 ELAGAPGVGPKARDELVEAGKGGLKADPWPEADSLEVKIGHAVPKLSKPARVALAERYGD 648 Query: 535 LEALEAASIE-----------ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 + A + +L + +G V A + FFAE NR ++ L+AE Sbjct: 649 WDTFAQALAQAGQGAPGEDYLQLAAIDGIGPVAAQSIARFFAEAHNREKVANLIAE---- 704 Query: 584 PAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 + + D+ AGKT+V TG+L +M+RD+AKA+ LGAKVA SVSKKTDLV+AG Sbjct: 705 LDIQPVAKPKTDTAVAGKTIVFTGALEKMTRDEAKAQAEGLGAKVASSVSKKTDLVVAGP 764 Query: 644 AAGSKLAKAQELGIEVIDEAEMLRLLG 670 AGSKL A ELGI+V+ E E L ++G Sbjct: 765 GAGSKLKTATELGIQVMTEDEWLAMVG 791 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 230/676 (34%), Positives = 345/676 (51%), Gaps = 39/676 (5%) Query: 22 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLS 81 Y+ + D YDRL+R ++ E +HP+ + P SPT +V + + H VPMLS Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKVAGGAVVG--DVPHTVPMLS 87 Query: 82 LDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTT 141 LDNVF + ++ RL W E KLDGLA++ Y G LV TRGDGT Sbjct: 88 LDNVFGAGQLADWAASLERRLGR-PVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGTA 146 Query: 142 GEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRN 201 GED++ + TI +P +L P +E+RGEV + + FE + G FANPR+ Sbjct: 147 GEDVSHAIGTIVGLPARLAE---PVTVELRGEVMMTASQFEDACVKRQAHDGTTFANPRS 203 Query: 202 AAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT-------HLGRLLQFKKWGLPVS 254 AAAG+LR D + LTFF YG H + G+ Sbjct: 204 AAAGTLRAQDRPYVCE--LTFFGYGALPYPDDTSEQAVQLRELPHSEVMTWVAGQGVQTP 261 Query: 255 DRV----TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWA 310 + + E++ ++ R L F IDG+VIK + A Q Q GF +RAPRWA Sbjct: 262 AVTDVGGIVATTLEQIQERVEQIAAKRTELPFGIDGIVIKCDLAADQAQAGFSSRAPRWA 321 Query: 311 VAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLR 370 +A+K PA E++T + VE+ GR+G I P A LEPV + G +V+ ATLHN +I R GL Sbjct: 322 IAYKLPATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLHNVADITRRGLM 381 Query: 371 IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGL 430 +GD VV+ +AGDVIP+V V+ R D + + P CP CG ++ + RC G Sbjct: 382 LGDSVVVYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCPTCGDAIDASQER--WRCVRGR 439 Query: 431 ICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGP 490 C + S+ + R +D++G+ + I QL++ + ADLF LT ++ GLERMG Sbjct: 440 AC--RVIASIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTREQVLGLERMGA 497 Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 S N++ A+E+AK +R ALG+R G + + +A +FG+++A+ AA E ++ V Sbjct: 498 TSTDNLLAAIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIRAADAEAIEAVE 557 Query: 551 DVGIVVASHVH------NFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS------PF 598 +G A V ++ + ++ P + ++ P Sbjct: 558 GIGPKKAPGVVAELVELADLIDKLVKAGVTMTEPGWTPPAEPGADAQADPEAGGTSGLPL 617 Query: 599 AGKTVVLT----GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 AG +VV+T G+L ++R++ + G K + SVS KT L++AGE AGSK AKA+ Sbjct: 618 AGMSVVVTGAMSGALEALTRNEMNELIERAGGKASSSVSAKTSLLVAGEKAGSKRAKAES 677 Query: 655 LGIEVIDEAEMLRLLG 670 LG+ ++ E L+G Sbjct: 678 LGVRIVGPEEFAGLVG 693 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 213/677 (31%), Positives = 338/677 (49%), Gaps = 35/677 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ME Q++ EL L Y+ D + D E+D EL++LE + E+I +SPTQ Sbjct: 1 MEDKTQRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLEQE-TEVILSNSPTQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG + ++ H +P+ SL + F K DGL Sbjct: 60 KVGYEVKSKLDKVVHNIPLKSLGKTKSIDDLQKFI----------GNNEILIMDKGDGLT 109 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 ++Y+NG L+ +TRG+G GEDIT NV+T + IPL++ + L++ GE + Sbjct: 110 CELIYDNGQLLQGSTRGNGEIGEDITHNVKTFKNIPLQI---DFKGYLKLSGESVILDED 166 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE IN ++N RN AGS+RQLD +I KR + F+ + + E T Sbjct: 167 FELINAKLDEEDK--YSNSRNLVAGSVRQLDSKICDKRNVRFYAFSLLECGEAE-FKTKE 223 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +L + G + + +++EE+ K+++ GF IDG+V N++ L Sbjct: 224 EQLEFLSRLGFETIEYIKY-DNSEELEQVISKMQKSAYEKGFPIDGLVFAYNNIEYANSL 282 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G P ++A+KF +E T E+QV RTG I PVAR EPV + G +V ATLHN Sbjct: 283 GDTLHHPLHSIAYKFYDEEYETKYIATEWQVSRTGMINPVARFEPVEIEGSVVERATLHN 342 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-- 418 D E L L GD + + +A VIP+V++ E + PT CPVCG E Sbjct: 343 LDYFEDLKLGQGDTIKVIKANQVIPKVMSNDTMSNTE-----IIPTECPVCGGKTEEKLL 397 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + V C C A+ + H+ SR AM++DG+ +K I++ V Y+ D++KL Sbjct: 398 KTARVLICINPE-CSAKHISRIVHYCSRNAMNIDGLSEKTIEKFVNLGYLKDIDDIYKLE 456 Query: 479 --AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 ++ ++ G KS N++ A+EK+K F++ALG+ VG TA L F ++E Sbjct: 457 QYKEEIINIDGFGTKSYNNMIEAIEKSKHCKLENFIFALGVPSVGLGTAKLLVKKFKSIE 516 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 + ++EE+ + +G VV + ++N+F + + L + + + E + Sbjct: 517 KVMNCNLEEIYSIDGIGDVVGNEIYNYFIINKDSINLVNKLLKFIDFEEVK----ESSSN 572 Query: 597 PFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKAQ 653 GKT V+TG + +R++ KA++ E+G KV GSVSKKTD +I E+ SK KA+ Sbjct: 573 KLEGKTFVITGDVHVFKNRNEVKAKIEEMGGKVTGSVSKKTDYLINNDVESTSSKNQKAK 632 Query: 654 ELGIEVIDEAEMLRLLG 670 +L I +I E E + ++ Sbjct: 633 DLNIPIITEEEFVEMIK 649 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 210/712 (29%), Positives = 360/712 (50%), Gaps = 57/712 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 ESI++ + +L L E+ Y+V+ P + D YD R L E K+P+ + SPTQR Sbjct: 9 ESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQR 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG++ F +++H+ MLSL N F+ E L FN+ + + E + E K+DGL++ Sbjct: 69 VGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAK-ISKQEDNPYVLEPKIDGLSI 127 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y +GVL A TRGDG GE + +N++TI+ IPLK++ + +RGEV++ F Sbjct: 128 SLIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTTIKK--IVIRGEVYVSNQDF 185 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E IN K FAN RN A+GSLR +D AKR L F Y + +T Sbjct: 186 EAINASRDE--DKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYEL-GFETQYQ 242 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + Q K+WG V+ + L + +E+ ++E ++ L + IDG VIK N+ E +G Sbjct: 243 VIQQLKEWGFNVAKEIKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIG 302 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + ++ P+WA+A+KF + T ++D+ VGRTG +T VA+L P+ + G +++ ATLHN Sbjct: 303 YTSKFPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNL 362 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I L +RI D V + +A ++IP+V+ V L +RP + +++ F +CP C + + E Sbjct: 363 EYINDLDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPEE 422 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE--------------- 466 C C ++ + L ++ S+ M+++G+ + + + Sbjct: 423 VDWYCIYDQ-CKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITNQ 481 Query: 467 ------------------YVHTPADLFKLTAGK----------------LTGLERMGPKS 492 +V++ D+++L K L R KS Sbjct: 482 NVSEDLSLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEKS 541 Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 ++N++ ++K R L AL I+ +G ATA +A + ++ L+ ++E+ ++ D+ Sbjct: 542 FDKLINSINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLADI 601 Query: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQM 612 + A+ + +FF++E N +I +L ++ I + + S + K V+TGS S Sbjct: 602 SSITANSLFSFFSDEKNWELIEQLKTLSINTKDEINNDLVDSSSIYYDKKFVITGSFSIS 661 Query: 613 SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEA 663 D K ++ K VSK D V+AG + K+ +A+ L I +I E Sbjct: 662 RNDIIKKLSLKYKIKFVSGVSKNVDFVLAGNSPTAKKINQAKVLNIPIIQEE 713 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 250/593 (42%), Positives = 385/593 (64%), Gaps = 10/593 (1%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I+ ++ LR L + EYLY+V ++ D EYD L+ ELR+LE K+P LIT S TQ Sbjct: 1 MKLIKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQ 60 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-----WCCELK 115 + + ++IRH+ PMLSL+++ D+ L F+KR++ +L N+ + +CCELK Sbjct: 61 SISNVCDNSLNRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELK 120 Query: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN---IPARLEVRG 172 +DG+A+SILY+ G LV AATRGDG GE++T NV I +IP L N +P LE+RG Sbjct: 121 IDGVALSILYKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKNNNEILPDLLEIRG 180 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E+F+ + F K+N++ +G KVF+N RNAA+GSLRQLDP +T R L F CYG+ G Sbjct: 181 EIFISKLSFSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAG 240 Query: 233 G-ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 +LP++H GRL +WGL +++ + + + VL +Y+ V + R L + IDG+VIK+ Sbjct: 241 LKQLPNSHWGRLKLCNRWGLSINNYIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKI 300 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 ++ Q+QLG RAP WAVA+KFPA+ ++T + DV F+VGRTG ITP+A + PV + V Sbjct: 301 DNCIYQDQLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNV 360 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 ++ +HN +E++RL L IGD V+++R+GDVIP+++ ++L R ++ + + P CP C Sbjct: 361 IIKKVNMHNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSC 420 Query: 412 GSDVERVEGE-AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT 470 GS ++ + + +V RC L C AQRK +LKHF SR+AM++ GMG ++I+QLV+K + T Sbjct: 421 GSILKVEDNKSSVLRCLAKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLICT 480 Query: 471 PADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAA 530 P D F L+ KL L+R G KSA+ ++ ++ AKE T + F+YALGI VGE+ + LA Sbjct: 481 PVDFFSLSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLAY 540 Query: 531 YFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 + T+E L A ++ ++ +G + A ++++F + N N I L+ + + Sbjct: 541 MYRTIENLMNADLQSFLQLKFIGKIAAMNIYSFLHQSDNYNNIQGLIRSNLIF 593 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 208/681 (30%), Positives = 344/681 (50%), Gaps = 29/681 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 ++ IE ++ LR +R Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 10 IKDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTL 69 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR-VQDRLKNNEKVTWCCELKLDGL 119 + G+ L F ++ H P+LSLD +D + L + ++ V + E K+DG Sbjct: 70 KFGSDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGC 129 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NVRTI+ +PL + + L +RGE+++ + Sbjct: 130 SIVLYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSI---DEKVELVLRGEIYITKE 186 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + N RN A+G LR+++ R A PL F Y + T+ Sbjct: 187 NFLKINHTL----KNPYLNARNLASGILRRINSREVASFPLDIFVYDILYSS--FGLSTN 240 Query: 240 LGRLLQFKKWGLPVSDRVTLC--ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + KK+G ++ ++ EE+ K+E R +L ++IDGVV+KV+S + Sbjct: 241 HDAFDKLKKFGFKINPFCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILR 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + LG+ + P+W+VA+KF + ++ + D+ QVGR+G ITPVA +E V VAG ++NA+ Sbjct: 301 DILGYTSHHPKWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN D I+ +GL +GD V I R GDVIP V VV ++CP C + + Sbjct: 361 LHNQDYIDSIGLNVGDVVAISRRGDVIPAVELVVEKLSIGS---FKISSNCPSCKMALIK 417 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C C + E +K+F S++ M++ G+ K I+ L E +++ + +L+ Sbjct: 418 E--GSHLFCVNKH-CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTF 474 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY------ 531 +L L K N+ ++ +K F + L +GI+E+G T L Sbjct: 475 NFDRLINLRGFDLKRIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFD 534 Query: 532 -FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 TL + A++ +L K+ +G +A ++ F ++ + + G N Sbjct: 535 IISTLCKNKEAALAKLLKIKGIGEKIALNIIEAFNDKIILDKFNFFKELGFKL-EEYNTN 593 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 DS GK +TGS SRD ++ + GA +V+K+ D ++ GE G KL Sbjct: 594 YVVDDSFLFGKKFCITGSFEGHSRDVLIEKITKKGAIFNRAVTKRLDFLLVGEKPGLKLQ 653 Query: 651 KAQELGIEV---IDEAEMLRL 668 KA LGI+ D + + L Sbjct: 654 KANNLGIKTFGLFDIKDFVDL 674 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 240/680 (35%), Positives = 348/680 (51%), Gaps = 32/680 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +++ EL + Y+ AP + DAEYD + ELR L HPEL +P +V Sbjct: 2 DAGERIRELADRIVELRTAYY-EGAPLVADAEYDAVEDELRALIAAHPELAPDPNPLDQV 60 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + +RH PMLSL+ E AF +R KLDGL+++ Sbjct: 61 GA-PAVLHAPVRHSRPMLSLEKATTPEQVAAFFERF-------PGQPVVVMPKLDGLSLA 112 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRT-IRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE+G LV A TRGDGTTG+D+T VR + +P ++ ++P R+EVRGE + ++ F Sbjct: 113 LVYEDGRLVRAVTRGDGTTGDDVTMLVRALVDGVPEQI---DVPGRVEVRGEAVMLRSTF 169 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 N K NPRNAAAG+LR DP A+R L FF + + EGG D G Sbjct: 170 LAYNA---AHPDKPLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLGEG 226 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + G+ + +C AE+ A +E R L +DIDG V+++ G Sbjct: 227 ----LRALGIA-GAAMRMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAAAG 281 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR A+AFKF A+E+ T + V + VG+TG I PVARLEPV V G V+ ATL N Sbjct: 282 TRSNSPRGALAFKFAAEEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLANQ 341 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEG 420 I +++GD V++RRAGDVIP V V+ S+R E+V PT CP CG V Sbjct: 342 QVIRARDIKVGDTVLVRRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQGN 401 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 CT C AQ L H+ SR A D+D +G I++L E + P+D + LT Sbjct: 402 SRELFCTNA-SCPAQTVRRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLTKE 460 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY-FGTLEALE 539 +L +R+G SA ++ +++++++ R L L I E TAA LA F +LE + Sbjct: 461 RLLEFDRIGEVSATRMIESIDRSRDVGLRRALIGLAIPMASEGTAARLARAGFASLEEVA 520 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E L V D+G VA+ + + + +P A Sbjct: 521 DAGEERLVAVEDIGPKVAASLVEHLTRLRPELERLRERGVSLDVREEDLPPVVAAGAPLA 580 Query: 600 GKTVVLTGSL------SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKA 652 GKTVV+TG++ +++R + + GA A SVS TDL+I G G SKLAKA Sbjct: 581 GKTVVVTGAISDPRSGEKVARPTFQRLCEKAGATAASSVSANTDLLITGAGVGESKLAKA 640 Query: 653 QELGIEVIDEAE-MLRLLGS 671 ++LG+E++D+A +L+ + Sbjct: 641 EKLGVEIVDQATIWAQLIEA 660 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 208/682 (30%), Positives = 350/682 (51%), Gaps = 30/682 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 +E +E ++ L+ ++ Y+V +P + D YD+ + L++LE+K+PE T DSPT Sbjct: 2 IEDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTF 61 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKR-VQDRLKNNEKVTWCCELKLDGL 119 R G+ L F +++H P+LSLD +D + + ++ V + + E K+DG Sbjct: 62 RFGSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGC 121 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQA 179 ++ + Y++G+L A TRGDG G D+T NV+TIR +PL++ + L +RGE+++ + Sbjct: 122 SIVLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRI---DEKIELVLRGEIYITKE 178 Query: 180 GFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 F KIN + N RN A+G LR++ + A PL F Y + +T Sbjct: 179 NFLKINRTL----KNPYVNARNLASGILRRISSKEVANFPLDIFVYDILYSSLK--LNTS 232 Query: 240 LGRLLQFKKWGLPVSDRVTLCESA---EEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 + K++G V+ ++A K+E R + ++IDGVV+K++S Sbjct: 233 HDAFDKLKQFGFKVNPFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDSFIL 292 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++ LG + P+W++A+KF + M+ V D+ QVGR+G ITPVA +E V VAG ++NA Sbjct: 293 RKILGSTSHHPKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASITNA 352 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 +LHN D I+ +GL +GD VVI R GDVIP V V+ P++CP C + Sbjct: 353 SLHNQDYIDFVGLNVGDIVVISRRGDVIPAVDLVIEKLAVGS---FKIPSNCPSCKMTLI 409 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + A C C + E +K+F S++ M++ G+ +K I+ L EK+++ + +L+ Sbjct: 410 KE--GAHLFCVN-RHCSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVELYT 466 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY----- 531 +L L+ K N+ ++E +K F + L +GI+++GE T L Sbjct: 467 FNCDRLINLKGFNLKRINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNLNSF 526 Query: 532 --FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 TL + A++ +L K+ +G +A ++ F +++ + + G+ Sbjct: 527 DTISTLCKNKEAALAKLLKIKGIGERIALNIIEAFNDKTILDKFNFFKELGLKM-EEDNT 585 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 N DS GK +TGS SRD +L + GA + SV+K D ++ GE G K+ Sbjct: 586 NDAVYDSFLFGKKFCITGSFKGYSRDVLIEKLTKKGAVFSRSVTKCLDFLLVGEKFGLKV 645 Query: 650 AKAQELGIEV---IDEAEMLRL 668 KA LGI+ D + + L Sbjct: 646 QKANNLGIKTFSLFDIKDFVDL 667 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 215/676 (31%), Positives = 333/676 (49%), Gaps = 38/676 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ I ++ EL L Y+ + D EYD L EL +LE + +I S TQ Sbjct: 37 MDKI-NRMKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLEKE-TGVILNGSRTQ 94 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 +VG ++ ++++H MLSLD + + L +E KLDGL Sbjct: 95 QVGFEVASSLTKVKHTSRMLSLDKTKSIDELTEW-------LGGHEGF---LSWKLDGLT 144 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + ++NG L A TRG+G TGEDIT N R I IP K+ E L VRGE + Sbjct: 145 LVLTFDNGTLTQAVTRGNGETGEDITMNARHIIGIPAKIPFE---GHLVVRGESLMKYKD 201 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE++N G + NPRN G++R LD ++TA+R + FF + + +G E ++ Sbjct: 202 FERVNSLIE--DGSKYKNPRNLCVGTVRNLDSKVTAERNINFFAFNLVSADGYE-SNSFA 258 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 R+ G V + S + + E+D F DG+V+ ++ +A L Sbjct: 259 ERIQWLNSLGFQTVYGVKVDSSV--LAEKVAEFEKDIVNNEFPSDGLVLMLDDVAYGRSL 316 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G + APR +AFK+ + T +R++E+ RTG + PVA +PV + G VS A++HN Sbjct: 317 GETSHAPRNGMAFKWRDETADTTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRASVHN 376 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER--- 417 +++L L IGD + I +A +IPQV+ E + P CP+CG E Sbjct: 377 VSIVKQLKLGIGDTLSIYKANMIIPQVL-----ENKTGSASAAIPEVCPICGEKTEIKTS 431 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + CT C A+ +HFV R AM++ G+ I+ V + +V +D + L Sbjct: 432 DDDVETLFCTNKE-CPAKHIGRFEHFVQRDAMNIVGLSTATIETFVSEGFVKKYSDFYHL 490 Query: 478 T--AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL 535 K+ +E G +S Q + A+E ++ T +R LYA+GI +G A + + A + + Sbjct: 491 DRFREKIVTMEGFGERSYQKMQEAVEASRHTEMSRILYAVGIPNIGRAASRLICAEYPDV 550 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 A+E + EEL + +G V+A+ FFA E N ELL E A D Sbjct: 551 NAIEKLTAEELTAIDGIGEVLANDYVKFFANEDNLTEYHELLTE----LDIAEPEAVSED 606 Query: 596 SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKLAKA 652 SP AGKT V+TGS++ +R++ KA + +G KV+GSVS KT +I + + +K A Sbjct: 607 SPIAGKTFVITGSVNIWKNRNELKAYIESMGGKVSGSVSSKTSYLINNDSQSNSTKNKTA 666 Query: 653 QELGIEVIDEAEMLRL 668 + L + +I E E L Sbjct: 667 KSLNVPIITEEEFREL 682 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 208/682 (30%), Positives = 352/682 (51%), Gaps = 32/682 (4%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M +E+++ +LR + H+ Y P I D EYD+L +L LE +PE +SPT+ Sbjct: 1 MNKVEEKIRDLREEVIKHDLAY-AKGDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTK 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R+ + ++ H +PMLS + + F +++ D L E KLDGL Sbjct: 60 RIIDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDEL--------LVEDKLDGLT 111 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V Y NGVL TRGDG G+DIT V IP + + LE+R E +P Sbjct: 112 VIAKYNNGVLYEGITRGDGKIGDDITHIVLNTPNIPKTIPFNDY---LEIRLEGIIPNED 168 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 FE +N + + RN A+G++R L+ + +R L + + + Sbjct: 169 FEMVNSILEEEDK--YKSSRNLASGTVRSLNGCVAKERGLKLIAFELVKADNIIFEKD-Y 225 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKV----EEDRPTLGFDIDGVVIKVNSLAQ 296 RL K G V + ++ E++L + +E RP L + +DG+VIK NSL Sbjct: 226 ERLEFLKTLGFDVVNYTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKANSLEL 285 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 ++ LG ++ P+W+ AFKF +E +T ++D +VG++G +TPVA EPV + G+ +S A Sbjct: 286 RDSLGNTSKYPKWSSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITISKA 345 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TL N ++ ++IGD VV+ RA DVIP++ + + +R + +E+ P CPVC + Sbjct: 346 TLSNFKNVKDKDIKIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCNEPIV 405 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + C C AQ + + HFVS++++D+DG+G++ I ++ + + D+F Sbjct: 406 KE--NVHYFCVND-DCPAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSIIDIFY 462 Query: 477 --LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L L++ K N++ +E +K+ + ++ L+ L I+ +G + LA F + Sbjct: 463 LKDKKDDLLKLDKYADKKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELANKFIS 522 Query: 535 LEALEAASIEE------LQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIV 588 ++ + S E + + + G +++++ FF +E N +I++L+ G IV Sbjct: 523 MKNILNISKNEEEFKQSILSINNFGEEMSNNLVLFFKDERNIELINKLMEVGFKMEEQIV 582 Query: 589 INAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVE-LGAKVAGSVSKKTDLVIAGEAAGS 647 EE + GKTVV+TG + +R++ ++ G K + SVSKKTD +I G+ AGS Sbjct: 583 KVNEEENM-LTGKTVVITGKFTDFTREELTEKIENEFGGKCSKSVSKKTDFLIYGDKAGS 641 Query: 648 KLAKAQELGIEVIDEAEMLRLL 669 K KA ELG+++I E E+L ++ Sbjct: 642 KYNKALELGVKLITEKELLDII 663 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 198/681 (29%), Positives = 335/681 (49%), Gaps = 43/681 (6%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ ++ ++ EL L + Y+ ++ DAEYDRL EL ELE + ++ +SPTQ Sbjct: 14 MDKVK-RIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENE-TGVVYTNSPTQ 71 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG + +++H PMLSLD + + F LK+DGL Sbjct: 72 SVGYEVKSELEKVKHSHPMLSLDKTKSVDDLVKF----------AGDKDCILSLKMDGLT 121 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + YENG LV A TRGDG GE IT N + IPL + + E+ GE + Sbjct: 122 CLLTYENGELVQAETRGDGEIGELITHNAKVFENIPLSI---DYKGHFEIEGEAIITYED 178 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F+KIN+ K + NPRN A+GS+RQLD +I A+R + F + V + + Sbjct: 179 FDKINKSLP--DDKKYKNPRNLASGSVRQLDSKIAAQRHIKFIAWKV---PTDIASSSFI 233 Query: 241 GRLLQFKKWGLPVSDR--VTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL G + +AE + ++ + F IDG+V N + E Sbjct: 234 NRLQYALDIGFDTVPFLPIRGNCNAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGE 293 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG P+ ++AFKF + T +R++E+ +G+TG +TPVA + V +AG VS A+L Sbjct: 294 SLGMTGHHPKHSIAFKFAEDSEETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASL 353 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG--SDVE 416 HN ++ L + IG V + + ++IPQ+++ + D PT CPVCG + + Sbjct: 354 HNISIMKELNISIGSTVTVVKKNEIIPQIISCDANAMDAD-----IPTTCPVCGGETRIV 408 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 + V C C + + HFVS++ MD+ G+ ++ I +L+E ++ D++ Sbjct: 409 KENDSEVLMCVNPH-CKGKLLGRVSHFVSKKGMDISGLSEETIKKLIELGWITEITDIYN 467 Query: 477 LTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGT 534 L +L+ + G KS + ++E +K +F+ +L + +G + + L FGT Sbjct: 468 LDQYYDRLSTMSGFGKKSVDKLRTSIENSKTVRLDKFIASLSVPGIGTSQSKELVKAFGT 527 Query: 535 LEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 + AS+ + ++ G V+ +++H++F + SN + Sbjct: 528 WDKFRDASVGYYDFTQLDGFGDVLNNNIHSWFEDMSNIADY------LASLMTFESEDNS 581 Query: 593 EIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKL 649 + ++ GK+ V+TG + + +RD+ K + + G KV GSV+K T +I E+ SK Sbjct: 582 KTNNSLNGKSFVVTGKVYKFKNRDEVKEAIEKFGGKVTGSVTKSTFALINNDIESNSSKN 641 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA+ELG+++I+E +++ +LG Sbjct: 642 KKAKELGVQIINEEQLIEMLG 662 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 215/707 (30%), Positives = 348/707 (49%), Gaps = 55/707 (7%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + I++++ L L+H +LY+ +DAPE+ D YD L EL ELE K+P L+ DS T+ Sbjct: 4 QQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSVTKI 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +GA F + +H MLSLD + E +F + KN E + E K+DGL++ Sbjct: 64 IGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFTQY-KNLENFGFSLEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 SI Y+NG + A TRGDGTTGED++ NV IR +P ++ LEVRGE+++ ++ + Sbjct: 123 SIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQISYLKP---LEVRGEIYMKKSTW 179 Query: 182 EKINEDARRTGGKV----------------------------FANPRNAAAGSLRQLDPR 213 + +NED + + F N RNAAAG+LRQ DP+ Sbjct: 180 KSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAGTLRQKDPK 239 Query: 214 ITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKV 273 I R L+ Y + L T + L K+ V++ L ++ +E++ ++ Sbjct: 240 IVKSRNLSSLFYEIVSPLEHNL-KTQMEVLAFLKEQNFEVNEFQKLAKNDQEIMFEINEF 298 Query: 274 EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGR 333 + + FD DG VIK N + + EQ+GF ++ P+WA+A+K+ +E T + ++ QVGR Sbjct: 299 SKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVAQVGR 358 Query: 334 TGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS 393 TG IT +A+ PV + V NATLHN + I++ + IGD++ I ++G++IP+V+++ Sbjct: 359 TGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVISIYKK 418 Query: 394 ERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDG 453 +CP C S +E EG C C ++ + L FVS+ +++ Sbjct: 419 NTD---SVFEKVLNCPSCNSLLEIPEGYVDQFCRN-ENCDEKKIQMLTFFVSKNCLNITN 474 Query: 454 MGDKIIDQLVEKEYV--HTPADLFKLT--AGKLTGLERMGPKS-----AQNVVNALEKAK 504 + + I + D+F L ++ ++ KS N++ ++EKAK Sbjct: 475 LSVQNIRIFYNHPVIQMREIQDIFLLKNHVDEIKKIKFFAGKSQENKKINNILQSIEKAK 534 Query: 505 ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 + L ALGI+ +G A L L L + E+L + G ++ F Sbjct: 535 DAYLRNVLAALGIKGIGNIAANLLTNKITKLSDLNNLTDEDLLSIDTFGEKSIENLKEFL 594 Query: 565 AEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL 624 + E N+++I L + + S +TGSLS +SRD+ K +++ Sbjct: 595 SSEKNQDLIKFLDENLNYLNSK-------KSSKLNNLNFAITGSLS-ISRDEFKKIILDN 646 Query: 625 GAKVAGSVSKKTDLVIAGEAAGS-KLAKAQELGIEVIDEAEMLRLLG 670 G + SVSK T +I+ S K+ KA E I+VI E E LL Sbjct: 647 GGIFSNSVSKNTSYLISNSKENSTKIKKALENNIKVITEEEFHNLLK 693 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 210/681 (30%), Positives = 344/681 (50%), Gaps = 36/681 (5%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ +L L Y+ ++P I DAEYDR+ EL ELE + I +SPTQ VG Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQ-TGFILSNSPTQTVGYT 69 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P++ +++H VP+LSLD + ++F + LKLDGL ++Y Sbjct: 70 PISELPKVKHPVPLLSLDKTKQVQDLISFAGK----------QPVLFMLKLDGLTTKLVY 119 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG LV A+TRGDG GE IT N+ +PL + RL + GE F+P FE++ Sbjct: 120 ENGTLVEASTRGDGEIGELITHNIPAYVDVPLSIP---YKGRLVIVGESFIPTHDFERLK 176 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV--GVLEGGELPDTHLGRL 243 E R G+ + N RN A+GS+R LDP A R L F + V G+ PD+ ++ Sbjct: 177 ETLRDGKGEPYKNGRNLASGSVRSLDPANCAGRCLHFMPFNVLEGLDSPFLFPDSRAMKI 236 Query: 244 LQFKKWGLPVSDRVTLCE--SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 +G + ++E V + ++ + IDG+V+ +SL + G Sbjct: 237 SSLFDYGFQPCPYIAANHPLTSELVNQYIERLTDLAGKKHLPIDGIVMIFDSLDYSKNCG 296 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +AFKF + T +R++E+ R G I PV +PV + G VS ATLHN Sbjct: 297 RTGHHYKDGLAFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRATLHNL 356 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 I+ L L G ++ + + +IP + + D V CP CGS + + Sbjct: 357 TFIKELELVPGCRISVSKRNMIIPHIEENLERGHYVDAVPPV----CPCCGSQTRIYQRK 412 Query: 422 -------AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 C C +Q ++ HFV ++AM+++G+ + +++ + Y+ T D+ Sbjct: 413 GNDGRLIETVHCDNP-NCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYLQTFPDI 471 Query: 475 FKLTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L ++ LE G KS + + N++ ++ TTF RFL ++ I VG + L F Sbjct: 472 YHLNEHQEEILQLEGFGKKSFERLWNSITSSRNTTFVRFLVSMDIPMVGRTKSRILDTVF 531 Query: 533 -GTLEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 G+L+ A+ + ++ D G + ++H++F++E N ++ L + + + + Sbjct: 532 HGSLQEFFDAASGDYDFTQLDDFGDTLNQNIHDWFSDE-NNLILWHELQKELIFEERKEM 590 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 N ++ F G T+V TG L+ +RD+ ++++ELGAK SV+KKTD +I GE AGSKL Sbjct: 591 NTMMKENVFTGCTIVATGKLAHFTRDEINSKILELGAKAGSSVTKKTDYLICGEKAGSKL 650 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 AKAQ LGI+++ E E L ++ Sbjct: 651 AKAQSLGIKILSEDEFLEMIA 671 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 211/680 (31%), Positives = 320/680 (47%), Gaps = 40/680 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+++ +++ EL T++ + Y+ DAP + D +YDRL EL LE + I SPTQ Sbjct: 1 MQNL-ERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERE-TGTILSSSPTQ 58 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 RV L + + +RH PMLS D + L +E KLDGL Sbjct: 59 RVSGEVLESLTAVRHSRPMLSADKCKSVAD-------IHKYLGGHEA---VLSWKLDGLT 108 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + YENG LV A TRGDG GED+T VR ++ +PL + LEVRGE + Sbjct: 109 LVLRYENGKLVQAITRGDGLQGEDVTHTVRIMKNVPLVIPC---KEPLEVRGEGVISWKE 165 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F +N +A+PRN AAGS+R+L+ +R L+F + + + T Sbjct: 166 FHALNGTLDE----PYAHPRNLAAGSVRKLNAEEVRERGLSFMAFDL--ISDNLGGSTKW 219 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEE--VLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L + G L A E V + + DG++ + N LA Sbjct: 220 ETLRFLAQMGFTTVGYSILAAGASEEAVRQAMDFYQPK--EYAYPTDGLIFEFNDLAYGR 277 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 LG AFK+P T R +E RTG I+ A + V + G V++A L Sbjct: 278 SLGATGHHENRMTAFKWPDTRYETKFRRLEVATTRTGMISLTAAFDDVVIDGTTVNHAYL 337 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 HN D RL L GD + + +A +IPQ+ +E + P CP CGS + Sbjct: 338 HNLDNFTRLALGPGDTISVYKANMIIPQI-----AENKTKSGGCPLPDVCPCCGSTLVVR 392 Query: 419 E---GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + G C C A+ HF S+ M++ G+ ++ + V+ +V DL+ Sbjct: 393 QSSGGTRQLYCEN-EACPARLVRKFVHFCSKTRMEIKGLDEQTLTTFVQHGWVKNYGDLY 451 Query: 476 KL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF- 532 +L ++ G KS + NA+++ + T +F+ ALGI EVG L F Sbjct: 452 ELERHKEEILKTPGFGEKSFARLQNAVDERRTCTLNQFIAALGIPEVGRHAGRILNRKFG 511 Query: 533 GTLEALEAASIE--ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 G+ +A E A ++ + ++ D G V+ +++ ++++E + L Sbjct: 512 GSWDAFERAILDQFDFTQLEDFGQVMNDNIYCWYSDEEEAKLWRPALNHITFLKEET-TM 570 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA 650 E ++PFAGKTVV TG L +RD + +L+ LGA+ A SVSKKTD +I GE AGSKL Sbjct: 571 PEAQNNPFAGKTVVATGKLENYTRDGIQMKLLSLGARPASSVSKKTDYLIVGENAGSKLT 630 Query: 651 KAQELGIEVIDEAEMLRLLG 670 KAQ LG+ + E + L++L Sbjct: 631 KAQTLGVTTLTEQQFLQMLA 650 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 240/682 (35%), Positives = 341/682 (50%), Gaps = 48/682 (7%) Query: 26 DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNV 85 + D YDRL R + E HPE + DSPT +V + H VPMLSLDNV Sbjct: 42 GESALDDDAYDRLARGIAAYEADHPEEVLADSPTGKVAGGAAVG--DVPHTVPMLSLDNV 99 Query: 86 FDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDI 145 F E F+ + ++ R+ W E KLDGLAV+ Y +G TRGDGT GED+ Sbjct: 100 FSAEQFVTWTASLERRIGR-PVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDV 158 Query: 146 TSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAG 205 + + +P +L P +EVRGE+ + F + N GG FANPRN AAG Sbjct: 159 SHAAGAVVGLPERLAE---PVTIEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAG 215 Query: 206 SLRQLDPRITAKRPLTFFCYG-VGVLEGGELPDT-----HLGRLLQFKKWGLPVSDRVTL 259 +LR D + TFF YG + + + GEL + H L G+ + + Sbjct: 216 TLRAKDRAYRVET--TFFAYGALPLPDSGELGEALAELPHSEVLAYVAGLGVHTAAGTAV 273 Query: 260 C----ESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 + EEV A + R L F IDG+VIK + A Q++ G RAPRWAVA+K Sbjct: 274 APLRATTVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKL 333 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKV 375 PA E++T + VE+ VGRTG I P A LEPV + G V ATLHN +I R LR+GD+V Sbjct: 334 PAVEKITRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQV 393 Query: 376 VIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 ++ +AGD+IP++ V+ R D + FP CP CGS+++ E RCT G C + Sbjct: 394 MVYKAGDIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEIDASEQR--WRCTRGRDC--R 449 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 S+ + R +D++G+G + QLV+ V ADLF L +L L+RMG S N Sbjct: 450 LVASVSYAAGRDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDN 509 Query: 496 VVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIV 555 ++ A+E A+ +R ALG+R G + + +A +F T++ + AA E LQ+V +G Sbjct: 510 LLAAIETARTRPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKE 569 Query: 556 VASHVHNF----------------------FAEESNRNVISELLAEGVHWPAPIVINAEE 593 A+ V + AP A Sbjct: 570 KAAAVVAELVELAPLIGKLVAAGVSMTEPGATPPPDPGTEEAAAPATADAGAPGGDAATG 629 Query: 594 IDSPFAGKTVVLT----GSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 P AG TVV+T G+L ++SR+ + G K + SVS++T L++AGE AGSK Sbjct: 630 SALPLAGMTVVVTGAMSGALEKLSRNQMNELIERAGGKSSSSVSRRTTLLVAGEKAGSKR 689 Query: 650 AKAQELGIEVIDEAEMLRLLGS 671 AKA++LG+ + E L+G+ Sbjct: 690 AKAEDLGVRIAVPEEFAELVGA 711 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 211/682 (30%), Positives = 338/682 (49%), Gaps = 40/682 (5%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ EL + L Y+ + + EYD+ L LE + ++ SP+Q Sbjct: 39 QDSIARMKELISFLNEAAKAYYQEGREIVSNLEYDKAYDTLLSLEKE-SGVVLSGSPSQN 97 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A A + HE PMLSLD E +F + KLDGL + Sbjct: 98 VGYAVATALPKEAHETPMLSLDKTKSVEDLQSFLQ----------GQEGILSWKLDGLTI 147 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+ G L+ A TRG+G GE +T N +T + +PL++ L VRGE F+ + F Sbjct: 148 VLHYQEGKLLKAVTRGNGIIGELVTENAKTFQNLPLQIP---FKGHLVVRGEAFISYSDF 204 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG----GELPD 237 E+INE+ G K + NPRN +GS+RQLDP++T +R + + + + E + + Sbjct: 205 ERINEELPEEGAK-YKNPRNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHN 263 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 H +K G V +AE + + + P F DG+V+ N +A Sbjct: 264 QHEEEFRFLEKQGFSVVH--RKMVNAENIQEAVAEFSKLMPKNDFPSDGLVLLYNDIAYG 321 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG A+ PR A+AFK+ +E+ T + VE+ RTG I PVA PV + G +VS A+ Sbjct: 322 ESLGRTAKFPRNAIAFKWQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTVVSRAS 381 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG--SDV 415 LHN E L L IGD++ + +A +IPQ+ E + + P HCP C + + Sbjct: 382 LHNITYCEDLALGIGDEITVYKANMIIPQI-----GENKTKSGNLEIPKHCPACQGETKI 436 Query: 416 ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLF 475 + + + CT C A+R + FVSR A++++G+ + +++ + + ++ DLF Sbjct: 437 VKDKETKMLYCTNPH-CPAKRIKQFALFVSRDALNIEGLSEMTLEKWLGRGFIQEFPDLF 495 Query: 476 KLTA--GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG 533 L ++ G+E G KS + + +EKAK + R LY LGI +G + LA F Sbjct: 496 SLEKYREEIIGMEGFGLKSFEKIQENIEKAKTSNLGRLLYGLGIEGIGVSNGRMLAEAFS 555 Query: 534 -TLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE 592 L A+ EE+ +V +G V+A + +F +E NR ++ ELL+ + + Sbjct: 556 QDPYKLMDATKEEILQVKGIGQVLADSIAEYFQKEENRRIVLELLSIL-----HLEKEEK 610 Query: 593 EIDSPFAGKTVVLTGSLSQMS-RDDAKARLVELGAKVAGSVSKKTDLVIAGE--AAGSKL 649 E S +GK V+TG++ R + + + G + + SVS+ TD +I + + SK Sbjct: 611 EEKSGISGKHFVITGAVHHFPNRKALEEEIRKAGGQSSSSVSQNTDYLINNDSTSGSSKN 670 Query: 650 AKAQELGIEVIDEAEMLRLLGS 671 KA+ELGI +I E E L+LL + Sbjct: 671 KKAKELGIPIITEEEFLKLLEA 692 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 223/680 (32%), Positives = 334/680 (49%), Gaps = 29/680 (4%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + E+++ +L + Y+ +P + DAEYD ELR L +PEL +P +V Sbjct: 10 NAEERIRDLADRVVSLRDAYYR-GSPLVADAEYDATEDELRSLIAANPELTPDPNPLDQV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P + +RH PMLSL+ E AF R KLDGL++S Sbjct: 69 GA-PAVLHAPVRHARPMLSLEKATQPEQVAAFLDRF-------PGQPVVVMPKLDGLSLS 120 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTI-RAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++YE G L+ A TRGDGTTG+D+T VR + +P ++ P R+EVRGE + ++ F Sbjct: 121 LVYEGGALLRAVTRGDGTTGDDVTPLVRALADGVPTRVP---APGRVEVRGEAVMLRSTF 177 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 NE K NPRNAAAG+LR DP A R L F + + + Sbjct: 178 TAYNE---AHPDKPLINPRNAAAGTLRAKDPATVAGRRLRFLAFEL-DTDAEAGAGVGAD 233 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 + G + AE +E R L +D+DG V+++ G Sbjct: 234 LEEGLRALGF-TPADMRHAADAEAAQRVITGIETGRADLDYDLDGAVLRLADRRAYAAAG 292 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + +PR A+AFKF A+E+ T + DV + VG+TG + PVA LEPV V G V+ ATL N Sbjct: 293 TRSNSPRGALAFKFAAEEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQ 352 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVERVEG 420 + I+ G+ +GD V++RRAGDVIP V V+ ++R + RE+V P+ CP C + Sbjct: 353 EVIKARGVMVGDTVLVRRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGN 412 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 CT + C AQ L H+ SR A D+D +G I++ E + P+D + LT Sbjct: 413 SRELFCTN-VSCAAQTVRRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKE 471 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATA-AGLAAYFGTLEALE 539 +L ER+G SA ++ ++ ++ R L + E TA A FG+LE + Sbjct: 472 QLLEFERVGETSATRMIESIAASRAVGLRRALIGFAVPMASEGTATRLCRAGFGSLEEVA 531 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFA 599 A E L +V D+G VA+ + A + + D+P A Sbjct: 532 DAGEERLVEVEDIGPKVAASLTEHLARLRPELTRLRQRGVSLDVRDEDLPPVVASDAPLA 591 Query: 600 GKTVVLTGSL------SQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGS-KLAKA 652 GKTVV+TG++ +++R + + GA A SVS TD++I G G+ K AKA Sbjct: 592 GKTVVITGAISDPRSGEKVARPAFQRLCEKAGATTASSVSANTDMLITGAEVGAGKTAKA 651 Query: 653 QELGIEVIDEAE-MLRLLGS 671 ++LG+ V+D+ E +L+ + Sbjct: 652 EKLGVAVVDQGEIWAQLIAA 671 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 210/705 (29%), Positives = 349/705 (49%), Gaps = 58/705 (8%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT----PDSP 58 I ++ ELR + + Y+ + P + D YD+ +REL +LE ++ L + SP Sbjct: 6 QIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQSP 65 Query: 59 TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDG 118 +Q+VG+ + F ++ H PMLSL+ + E + K+ ++ LK VT+ E K+DG Sbjct: 66 SQKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILK---TVTFFVEPKIDG 122 Query: 119 LAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA--IPLKLHGENIPARLEVRGEVFL 176 +A+S+ Y+NG L+ A TRGDG GE++ N I IP K+ N LEVRGE+++ Sbjct: 123 IALSLFYQNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKI---NYLEDLEVRGEIYI 179 Query: 177 PQAGFEKINEDARRTGGKVFANPRNAAAGSLRQ---LDPRITAK-----------RPLTF 222 + F + + K F NPRNAA+G LR+ P+I AK R L Sbjct: 180 DNSTFASL-----QLETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRYLKS 234 Query: 223 FCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 F Y + E ++ ++ + + G V+ C ++V F +++ R L + Sbjct: 235 FFYTLVNPEKHKI-NSQFDSINFLRNLGFQVNPFQKKCSDLKDVFNFISIIKQKRDFLNY 293 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 +IDGVV+KVN + E+LG ++ P A+AFKF T + + +GRTG +T A+ Sbjct: 294 NIDGVVVKVNEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTYNAK 353 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 +EPV +AG +S+A L N IE L L + +V I++AG++IPQ++ V Sbjct: 354 IEPVTLAGSKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSV---HNYPKTNF 410 Query: 403 VFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQL 462 +CP C S++ E C C + + HF S+ A++++ + K I++ Sbjct: 411 SIVKNCPKCNSELVNSESGLDQFCQNQF-CPEIILQKIVHFCSKNALNIESLAQKRIEKF 469 Query: 463 VEKEYVHTPADLFKLT------------AGKLTGLER----MGPKSAQNVVNALEKAKET 506 +EK + + D+F L +L + M KS ++N +E+AK Sbjct: 470 LEKGLISSACDIFYLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERAKNI 529 Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 F R ++ LGIR VG A L+ Y L L L+ D G V+ + ++F Sbjct: 530 DFYRLIFGLGIRNVGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDYFNN 589 Query: 567 ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGA 626 + N ++ L G ++ + N + ++G LS+ RD+ + E GA Sbjct: 590 QKNSEQLNCLETVGFNFKTTFLTNQSNSWAS-----FAISGKLSK-PRDEYVRIIEESGA 643 Query: 627 KVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 SV+KKTD ++ G++AGSK+ KA++ GI++I+E + L+ + Sbjct: 644 SFHESVTKKTDFLLLGQSAGSKIEKAKKAGIKIINEVQFFDLIKN 688 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 206/672 (30%), Positives = 349/672 (51%), Gaps = 25/672 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ + L + Y Y+ ++ P + D EYD+ + EL +LE +HP+LI +SPT R Sbjct: 4 EEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSPTFR 63 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +G+ F++ ++ PMLSL ++ + +F + + E + + E K+DGL++ Sbjct: 64 IGSFASEKFTKFVYQKPMLSLAKAYNYDDINSFINNISK-IVPTENINFNIEPKIDGLSI 122 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ Y+ G LV AATRGDG+ GED+T N+ I++IP + N LEVRGEVF+ + F Sbjct: 123 ALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLI---NYFNDLEVRGEVFITKNDF 179 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +KINE + A +G+LRQLD I A+R L+ F Y + E Sbjct: 180 KKINESNNFANARNAA------SGTLRQLDANIVAERNLSAFLYEIVEPEKH-GIYYQHE 232 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L K P + + E E + E + L +D DG+VIK+N L ++LG Sbjct: 233 ALEFMKNLDFPTNPFSKVVEIEELEESISD-FAEIKNKLDYDADGLVIKLNDLQMWDKLG 291 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 ++ P+ ++AFK+ + + + D+ VGRTG IT +A + PV + V ATLHN Sbjct: 292 KTSKFPKHSIAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLHNH 351 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGE 421 + I+ + + I D+V I +AG++IP+V+++ + D T+CP CGS + EG Sbjct: 352 NFIKDMNININDEVNIIKAGEIIPKVISLKEEKNYVDY--YKKATNCPSCGSQLVEFEGI 409 Query: 422 AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA-- 479 CT C + ++ HF SR +++ G+G + K ++ D+F L Sbjct: 410 VDQFCTNDE-CPDKNINNIYHFASRNCLNIVGLGLSTVKDFYPK-FIKNIKDIFDLHKYR 467 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTL-EAL 538 +L L R N++N++E AK F++ ++ALGI+ +G+ A +A + E L Sbjct: 468 AELIKLPRYRDLKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAELL 527 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF 598 + ++ +LQ ++G + + F + +N+++++ L A + A+ I + Sbjct: 528 DDHNLLKLQNTKNIGPKIIESLIEFISSPANQDLLAFLDAIFNY-----EGKAKVISTIL 582 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 +G T V+TG LS+ R + E V+ ++S KT ++AG AGSKL KA + G + Sbjct: 583 SGYTFVITGVLSE-PRSHFVKLIEEHSGNVSSAISSKTSYLLAGSDAGSKLEKAYKTGTK 641 Query: 659 VIDEAEMLRLLG 670 VI+E + L+ Sbjct: 642 VINEEQFYDLIK 653 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 206/679 (30%), Positives = 342/679 (50%), Gaps = 35/679 (5%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M Q + + L Y+ + + + EYD+L EL ELE + ++ +SP+ Sbjct: 1 MADKIQLMKDKIEILDRAAKAYYQENTEIMSNIEYDKLYDELLELEKE-TGVVLSNSPSI 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 VG L+ + RHE PMLSLD D + + L + + KLDGL Sbjct: 60 HVGYELLSNLPKERHEKPMLSLDKTKDVGTLKEW-------LGTQKGI---LSWKLDGLT 109 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + Y++G LV A TRG G GE IT+N R R +P+ + L +RGE + + Sbjct: 110 IVLTYQDGHLVKAVTRGTGEEGEVITNNARVFRNLPVTI---AYKGTLILRGEAIIRYSD 166 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F KIN + G K + NPRN +GS+RQL+ ++T++R + FF + + + EL ++ Sbjct: 167 FIKINNEIADVGVK-YKNPRNLCSGSVRQLNNKVTSERNVYFFGFSLVKADNVELDNSRA 225 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ K G + D + S + ++ F DG+V+ +A E L Sbjct: 226 SQMNWLKNQGFDIVDFKEVTSS--NIEETVQWFSQNIEANDFPSDGLVLTFEDIAYGESL 283 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G A+ PR ++AFK+ + + T + ++E+ RTG I P+A EPV + G VS A++HN Sbjct: 284 GSTAKFPRDSIAFKWRDEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTTVSRASIHN 343 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC--GSDVERV 418 +E L L IGD + + +A +IPQ+ + + P CPVC +++++ Sbjct: 344 ISIMEGLELGIGDTIGVYKANMIIPQISENLTR-----SGMAPIPEECPVCKGKTEIKQE 398 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 G C C A++ +S HFV R AM+++G+ + +++L+ K + ADLF + Sbjct: 399 NGVKTLYCVNNE-CLAKQIKSFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELADLFHIE 457 Query: 479 AGK--LTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG-TL 535 K + LE +G KS ++ ++ KA++TT R LY+LGI VG + A + YF Sbjct: 458 KYKNEILELEGLGEKSFNKLITSINKARKTTAVRLLYSLGIPNVGLSNAKLICRYFKYDW 517 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +E A EL ++ +G ++A FF++E + ++ ++L E + + + Sbjct: 518 NKIENAEFSELIQIGGIGDIMAESFIRFFSDEKKKVIVQDVLNE----LELEEVQLSQSE 573 Query: 596 SPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKA 652 F V+TGS+ Q +RD+ K + E G KV G+V+ KT+ +I + SK KA Sbjct: 574 QIFENLNFVITGSVEQFKNRDELKDVIEEKGGKVTGAVTSKTNYLINNDNMSNSSKNKKA 633 Query: 653 QELGIEVIDEAEMLRLLGS 671 +EL I +I EA+ L L + Sbjct: 634 KELNISIITEAQFLEWLNN 652 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 208/465 (44%), Positives = 289/465 (62%), Gaps = 5/465 (1%) Query: 25 MDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDN 84 D I D E+D+L+ EL +LET+ P+L+ PDSP+QRVG F + H MLSL N Sbjct: 2 EDQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVGGTITKEFETVVHAYKMLSLGN 61 Query: 85 VFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGED 144 + +E +AF++RVQ L N + CE+K DG+A+S++YENG LV A TRGDGT G+D Sbjct: 62 TYSKEELIAFDERVQKGLGGNP-YEYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDD 120 Query: 145 ITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAA 204 +T+NVRTIR IPL + G+ IP R EVRGE+FLP FEKIN + G + ANPRNAA+ Sbjct: 121 VTANVRTIRNIPLYVKGDKIPERFEVRGEIFLPHREFEKINAERNENGEALMANPRNAAS 180 Query: 205 GSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAE 264 G+L+ D + AKR L + Y + L + H + + WG VS + E Sbjct: 181 GTLKMQDSSVVAKRRLNCYFYQL--LGEDIGVNAHDEAISLIESWGFNVSPTYRKTNTIE 238 Query: 265 EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFV 324 +VL + E R TL D DGVV+K+N Q+E+LGF A+ PRWA+A+K+ A+ T + Sbjct: 239 DVLTYIEDWREKRFTLPLDTDGVVLKINDYEQREELGFTAKNPRWAIAYKYKAESSETEL 298 Query: 325 RDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVI 384 V +QVGRTGAITPVA L PV +AG V A+LHNA+EIERLGL GD V + + G++I Sbjct: 299 LSVTYQVGRTGAITPVANLAPVSLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEII 358 Query: 385 PQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV 444 P++ V L +R D++ + + + CP CG+ +ER EGEA C C Q ++HFV Sbjct: 359 PKITGVSLEQRKPDSKPIEYISECPECGTPLERKEGEAKHFCPNASNCPPQVLGRIEHFV 418 Query: 445 SRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL--TAGKLTGLER 487 +RAMD+D +G + I L+++ ++ PAD++ L L GLE Sbjct: 419 HKRAMDIDSLGTERIRALIDQGFIQNPADIYDLESKQSDLLGLEM 463 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 13/225 (5%) Query: 456 DKIIDQLVEKEYVHTPADLFKLTAGKLTGLER---------MGPKSAQNVVNALEKAKET 506 + I++ VH L L L N++ + +K+ Sbjct: 569 EAILEASKRHGTVHRI--LLDLDLELSQELRERIKKLKANTFQEGVISNMMEGIAASKKQ 626 Query: 507 TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 F + L+ALG+R +GE TAA LA +FG+++ L AS EEL ++ VG + +H FF+ Sbjct: 627 PFEKVLFALGVRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGETLVQSIHEFFSR 686 Query: 567 ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGA 626 + N ++IS L G+ + A I + + GK ++ +G L+Q RD+ + G Sbjct: 687 QENLDIISRLKKSGLQFDAE-QIETVSLGNALEGKKILASGKLNQFKRDEIVDFIKSHGG 745 Query: 627 KVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLLG 670 + SVSKK D +I GE G SK KAQ+LGI +I E + L++L Sbjct: 746 QYVSSVSKKLDFIIEGEDMGPSKKEKAQKLGIPLISEEDFLKMLE 790 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 217/576 (37%), Positives = 361/576 (62%), Gaps = 3/576 (0%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH---PELITPDS 57 M+ I Q+ +L+ +++H Y+YH +D+P I D YD L +L +LE + L Sbjct: 1 MKDIYNQILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIK 60 Query: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 +VGA L F++ H++PMLSL ++ + F F+K++++ K+ +T+ C+ K D Sbjct: 61 LLDQVGAKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFD 120 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLP 177 GLAV++ Y+NG+L+SA+TRG+G+ GE+IT N+ I +IP K+ G NIP ++E+RGE+F+ Sbjct: 121 GLAVNLFYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMR 180 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 ++ F +N+ + +G K F+NPRNAAAGS+RQL+P I KR L FF YG G+ + + D Sbjct: 181 KSDFFILNQSCKLSGKKEFSNPRNAAAGSVRQLNPEIVKKRKLNFFVYGFGLFDYNKKID 240 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 +H RLLQ KKWG P+ +C++ +EV+ FYH + R L F+IDG+VIK++S+ Q Sbjct: 241 SHYQRLLQIKKWGFPLYKNYCVCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQ 300 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 LG + + P+WA+A KF + ++ T + + F+VGRTG ITPVA P+++ GV +S A+ Sbjct: 301 NNLGCIEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKAS 360 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 L+N I+ L +R+ D V + RAGDVIP++ NV++ +R + T++++ PT+CP C + + Sbjct: 361 LYNIKTIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIF 420 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + C C +Q + L +F S+ ++ G+G K I +L+ Y++TP D F L Sbjct: 421 SDDLKTCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSL 480 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T KL + RMG K ++ ++ + +K + +F+ +LGI VG + A LA Y+ ++E Sbjct: 481 TVKKLKNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGIFGVGTSIAKRLAYYYRSVEK 540 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 + + L K+ +G +++ + +F +SNR++I Sbjct: 541 FFNTNYDTLSKIDHIGYNISNAIISFLKNKSNRSII 576 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 227/580 (39%), Positives = 360/580 (62%), Gaps = 3/580 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I+ ++ LR + Y+V + + D +YD + EL ELE K+ + + V Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIV 68 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 F +I+H MLSL+++F+ ++ L F+++V+ L NEK +CCELK+DGLA++ Sbjct: 69 AKNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAIN 128 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI--PARLEVRGEVFLPQAG 180 ++Y+NG+L SA+TRGDG GED+T N I++IP L N+ P ++E+RGEVF+ + Sbjct: 129 LIYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFPKKIEIRGEVFIKLST 188 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 F KIN+ + K+F+N RN A+GSLRQ++P+IT R L+F+ YG+G + + Sbjct: 189 FNKINKMLKSKRKKLFSNARNMASGSLRQINPKITKNRSLSFYGYGIGYVNEKKYYYDQH 248 Query: 241 GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 L WG+P+ LC+S EV FY K + R L F+IDG+V+KVNS+ Q++L Sbjct: 249 DALKLINSWGIPIEKNTELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQKKL 308 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 G ++ PRWA+A+KF ++E+ T + V F VGRTG ITPVA+L+PV+ G ++ ++LHN Sbjct: 309 GCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSLHN 368 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 D I++LG+ I D V ++++GDVIP++ V+ +R + +E++FP C C S +E Sbjct: 369 KDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKRK-NVKEIIFPKTCIFCKSKIEFCLR 427 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + CTGG +C AQRK+ L HFVSR A+++ GMG+KII QL+EK+ + P+D+FKL Sbjct: 428 KKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSDIFKLNTD 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 K+ L+ MG KS++N++ + K+K T R +Y +GI VG T+ LA Y+ + Sbjct: 488 KIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYKNISNFIN 547 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 S E+L+ + +G ++ + F ++ N ++IS+LL Sbjct: 548 TSYEDLRSIKGIGSFTSNCIKKFLKDKRNISIISDLLNVN 587 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 214/467 (45%), Positives = 282/467 (60%), Gaps = 4/467 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + +L T + + Y+ +DAP DAEYD L EL++LE K P L+TPDSPTQ V Sbjct: 32 EATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQTV 91 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G + + F+ + H +PMLSLD+VF E+ + R L N+ V E+K+DGLAVS Sbjct: 92 GGSAVNTFAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQ-VEILAEVKVDGLAVS 150 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 ILYENG+L AATRGDG GED+T+NV TI +P +L G + PA +EVRGE++ P A F Sbjct: 151 ILYENGLLTRAATRGDGRVGEDVTANVLTISNVPRQLTG-DFPASVEVRGEIYFPIADFL 209 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL-PDTHLG 241 NE G K F N RNAAAGSLRQ DP TAKRPL C+G+G+ EGG+ PD+ Sbjct: 210 DFNEQRALRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIYEGGQSQPDSQHA 269 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 Q K WGLPVS+ L + E+ + R L +IDG+V KV+S Q LG Sbjct: 270 WYEQLKAWGLPVSEYTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKVDSRQYQAALG 329 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 +RAPRWA A+KFP E T + D+ QVGRTG +TP +E V VAG VS+ATLHN Sbjct: 330 TTSRAPRWAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVLVAGSHVSSATLHNQ 389 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER-VEG 420 DE++R G+ IGD V++R+AGDVIP+++ V S R R V P+HCP CG+ + EG Sbjct: 390 DEVKRKGVLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSHCPSCGAPLAPAKEG 449 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEY 467 + RC C AQ + + R A D++G+GD+ L + E Sbjct: 450 DVDLRCPNQASCPAQITQRISFMGGRSAFDIEGLGDESALALTQPEV 496 Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 12/216 (5%) Query: 455 GDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKS-AQNVVNALEKAKETTFARFLY 513 G + I +L +G+ + P +++ LEKAK+ R L Sbjct: 593 GWRQIRAFWSTGR--------RLKSGEWAKGQEPKPTQDLTKMLDQLEKAKQQPLWRVLN 644 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 AL IR VG + LA +F +L+AL+ AS+ EL V VG ++A V +F + +++++ Sbjct: 645 ALSIRHVGPTASQALADHFRSLDALQQASVAELAAVEGVGQIIAEAVVAWFQVDWHKHIV 704 Query: 574 SELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVS 633 + A GV EE+ AG T+V++G++ R+ AKA ++ GAK + SVS Sbjct: 705 NTWAASGVRMEDEAT---EELPQTLAGLTIVVSGTMPGYDRESAKAAIIARGAKASSSVS 761 Query: 634 KKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 KKT LV+AG AGSK KA+ LG+ ++DE + LL Sbjct: 762 KKTSLVVAGPGAGSKATKAETLGVPLVDETKFQLLL 797 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 240/713 (33%), Positives = 341/713 (47%), Gaps = 83/713 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 ++ EL L HH LY+ AP I DAEYD L EL+ L+ HP+L RVG+ Sbjct: 13 ARIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQL-------DRVGSD 65 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 P ++ H PM SLD + F + + C+ KLDG A+S+ Y Sbjct: 66 PAPGSVKVEHLFPMQSLDKASEVAEISHFVAQT-----TAHGRRFVCQPKLDGSALSLEY 120 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 G LV AATRG+G GED+T+N R I IP L + +RGEV +P F Sbjct: 121 RRGRLVRAATRGNGERGEDVTANARRIPNIPESLGWD---GDCHIRGEVVMPLETFRSKY 177 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRP--LTFFCYGVGVL---------EGGE 234 NPRN AAGSLRQ + L+F YGV Sbjct: 178 ASFAP-------NPRNLAAGSLRQKHVKAGKGDAADLSFHAYGVMFPGLDHKHPDSPAPP 230 Query: 235 LPDTHLGRLLQFKKWGLPVSDRVTLCESAEE--------------VLAFYHKVEEDRPTL 280 + + + G+ + + +E +L R T Sbjct: 231 DFNHDSQAIDWLTQNGIAAAGNEVVEAGVDEGIEEAEADEAVAEALLQVTENWARKRDTA 290 Query: 281 GFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPV 340 +++DGVVIK++ ++E LG A PRWA+A+KFP +E T + V++Q GRTG +TPV Sbjct: 291 DWELDGVVIKLDEFRKRELLGKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTVTPV 350 Query: 341 ARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED-- 398 AR+ PV V+GV V N TLHNA EIERLG+ +GD+V I R GDVIP++V V+ D Sbjct: 351 ARVAPVRVSGVTVENTTLHNAGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSADLD 410 Query: 399 ----------------TREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKH 442 R V P +CP C S + E A RC L C ++ + S+ + Sbjct: 411 NRFHADGTPFADPLPLRRGVKIPANCPRCRSGL--QEDGAFIRCFN-LECPSRLERSILY 467 Query: 443 FVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEK 502 + RA+++DG+G+K+ +QL E V T DL++L+ L GLERM KSA NV+ L+ Sbjct: 468 WC--RALEMDGIGEKLAEQLCEAGLVKTLPDLYRLSGKDLEGLERMAEKSAANVIAQLDD 525 Query: 503 AKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE------AASIEELQKVPDVGIVV 556 +K A FL ALG+ +G A G A G+ A+ A++E L ++ VG V Sbjct: 526 SKTLDLAAFLAALGLPGIGPELAGGFAQEIGSSTAMFELLADSEAAVERLIRIEGVGETV 585 Query: 557 ASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDD 616 A + + V + A E G+T +TG+L++ R + Sbjct: 586 AGSFLSGLEMRREMV------EDLVDVLTITDVEAVEKSGSLTGQTFCITGTLTR-PRKE 638 Query: 617 AKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 + G KV +VS K D ++AGE+AG KL KA L + V+ EAE+L ++ Sbjct: 639 VALMIKAAGGKVVSAVSGKLDHLVAGESAGLKLDKANRLSVNVLSEAEVLSMI 691 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 204/481 (42%), Positives = 276/481 (57%), Gaps = 16/481 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ + + + + Y++ DAP DA YD +R L+ LE + P L +P SPT R Sbjct: 69 EAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSPQSPTHR 128 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGL 119 VG F+ +RH M+SLD+VF E + V L E + CE+K+DGL Sbjct: 129 VGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCEVKIDGL 188 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL--HGENIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI IP L E+IP +E+RGEVF+ Sbjct: 189 ALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRGEVFMR 248 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG----- 232 F K+N + G FANPRNAAAGSLRQ DPRITA R L+F+ +G+G L Sbjct: 249 WDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRWGAGHA 308 Query: 233 ---GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 ++ + +KKWG+PVS S +E+L E R + +DG+V+ Sbjct: 309 GNGHDVVNDQSEAYELYKKWGVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHALDGIVV 368 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ L Q LG +RAPRWA+A+K+P +E T + D+ QVGRTG +TPVA L+PV+VA Sbjct: 369 KVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLKPVYVA 428 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTRE---VVFPT 406 G VS TLHN E+ER G+ IGD VV+R+AGDVIP++V VL R E V PT Sbjct: 429 GSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELRRFVMPT 488 Query: 407 HCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP CG+++ EG+ RC C AQ E + + SR+A D++ +GD+ L Sbjct: 489 RCPSCGAELAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGDQSAIALTNP 548 Query: 466 E 466 E Sbjct: 549 E 549 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 2/181 (1%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 + +++ ++KA+ R L AL IR +G TA +A+ FGTL+A+E AS++EL ++ + Sbjct: 708 TRKMLDEMDKARHADLWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDGI 767 Query: 553 GIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF--AGKTVVLTGSLS 610 G +A V +F + + V A+ P AGKTVV+TGSL Sbjct: 768 GSEIAESVVTWFTAAREPGNWRGAVLDAWKAAGVGVGQAQASGLPQTLAGKTVVVTGSLE 827 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 SRD AK +V G K AGSVSKKTD V+ GE AGSK AKA+ELGI +++E + +LL Sbjct: 828 GFSRDSAKEAIVLRGGKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLNEDQFKQLLD 887 Query: 671 S 671 + Sbjct: 888 T 888 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 227/710 (31%), Positives = 356/710 (50%), Gaps = 79/710 (11%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 + L + ++ H LY+ PEI DA++D L++ LRE++ +P+L ++VGA P Sbjct: 10 EADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL-------EKVGADP 62 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ H PMLSLD + F + + + + KLDG A+S+ Y Sbjct: 63 APGSVKVEHIYPMLSLDKANTPQEIAHFVN-----ITSAATQRFVVQPKLDGSAISLEYR 117 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G+LV A TRG GT GED+T NVR I IP ++ VRGEV + + + Sbjct: 118 RGMLVRAVTRGSGTRGEDVTRNVRRIPNIPNRIKWR---GNCFVRGEVVM-------LLD 167 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRP--LTFFCYGVGVLEGGELPDTH----- 239 R +V NPRN AAG+LRQ +P R L FF Y V EG ++ Sbjct: 168 TYRENYAEVAPNPRNLAAGALRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNY 227 Query: 240 ---LGRLLQFKKWGL-PVSDRVTLCESAEEVLAF-YHKVEED---RPTLGFDIDGVVIKV 291 L + P V + ++EV+ K EE R + ++IDG+VIKV Sbjct: 228 IHDSQILEWLFTMDIQPAGRFVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKV 287 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + L ++ LG A PRWA+A+KFP +E T V V++Q GRTG +TPVAR+ PV V+GV Sbjct: 288 DELTKRPLLGETAHHPRWALAWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGV 347 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--------ERPEDTREVV 403 V N TLHN E+ERLGL+IGD+V+I R GDVIP++ V+ R D Sbjct: 348 TVENTTLHNPGEVERLGLKIGDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFH 407 Query: 404 ----------FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDG 453 P+ CP CG+++ A +C C ++ S+ ++ +++++DG Sbjct: 408 EALPERIDVEPPSVCPRCGTNLHSE--GAFLKCRNS-GCPSRVVRSILYWC--KSLEIDG 462 Query: 454 MGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLY 513 +G+K+ +QLVE ADL++L+ + LERMG KSA+ V++ ++ ++ + F+ Sbjct: 463 VGEKLANQLVESGLAPELADLYRLSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIA 522 Query: 514 ALGIREVGEATAAGLAAYFGTLEALEAA------SIEE-------LQKVPDVGIVVASHV 560 +LG+ +G A+ ++ T+E EE L + +G +VA Sbjct: 523 SLGLPRIGPEIASMISKEIKTIENFRNLVNTWSSGREETTDILPRLVAIDGIGEIVARLF 582 Query: 561 HNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKAR 620 + + S++ + P AG T+ +TGS+++ R + + Sbjct: 583 LDGSK-----SNWSQIEDLSSLLEITPMQTENRSIGPLAGLTLCITGSMTR-PRKEVELL 636 Query: 621 LVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 + G KV SVS + D +IAG+AAGSKL KA L + V++E ++++ +G Sbjct: 637 IRSAGGKVVSSVSSRLDYLIAGDAAGSKLEKATRLQVSVLNEEQLMQKIG 686 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 599 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 214/577 (37%), Positives = 301/577 (52%), Gaps = 59/577 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L + + Y+V DAP DA YD M L+ LE++ P+L TP SPT R Sbjct: 46 EQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDTPQSPTHR 105 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK--VTWCCELKLDGL 119 VG F+ +RH M+SLD+VF E A+ V+ L+ E + CE+K+DGL Sbjct: 106 VGGTFSNDFTAVRHPSQMMSLDDVFSFEELRAWYDGVRKDLEWPEDKLLPMTCEVKIDGL 165 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI +IP L G +IP +E+RGEVF+ Sbjct: 166 ALNLIYRNGVLTQGLTRGDGVTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRGEVFMR 225 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG---- 233 F K+NE G FANPRNAAAGSLRQ DPRITA+R L+F+ +G+G L G Sbjct: 226 WDDFHKLNEANEDAGRPPFANPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVWGSGKP 285 Query: 234 ----ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 + ++KWG+P+S +++L E R + +DG+V+ Sbjct: 286 VDVADEVRNQSDAYTMYRKWGVPISPHNREVTDFDQILDMIEYYGEHRGDIEHALDGIVV 345 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ LA Q +LG +RAPRWA+A+K+P +E T + ++ QVGRTG +TPVA L PV+VA Sbjct: 346 KVDDLALQRRLGSTSRAPRWAIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAILNPVYVA 405 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR---EVVFPT 406 G VS TLHNA E++R G+ IGD VV+R+AGDVIP++V V+++R + E V PT Sbjct: 406 GSTVSRTTLHNAYEVKRKGILIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLREFVMPT 465 Query: 407 HCPVCGSDVE-RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP C + + EG+ RC C AQ E + + +R+A D++ +GD+ L Sbjct: 466 RCPSCDTVLRYEKEGDKDLRCPNSESCPAQLAERVINLAARKAFDIEHLGDQSAVALTNP 525 Query: 466 E------------------------------------------YVHTPADLFKLTAGKLT 483 E + + A+LF L A L Sbjct: 526 EDNRPDSVEAYAPGVREIVVEPGEEPAPYLAPSGLELPPIQEPVLTSEANLFDLEASDLR 585 Query: 484 GLERMGPKSAQNVVNALEKA-KETTFARFLYALGIRE 519 + V ++ KE L G+ Sbjct: 586 DVYVWREAQIIEVRRHVDSHGKERKVRHRLGGSGLWH 622 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDV 552 + +++ +EKAK T +R L AL IR VG TA LA +F TL+AL AS EEL+++ + Sbjct: 680 TRKMLDEIEKAKHTDLSRVLVALSIRHVGPPTAFTLAKHFKTLDALADASAEELEQIDGI 739 Query: 553 GIVVASHVHNFFAE-ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQ 611 G +A + FF E N +L + + E + GK+VV+TG+L Sbjct: 740 GAEIADSIATFFEEARMPGNWRGRVLEAWKAAGVGMSTHDEGLPQTLEGKSVVVTGTLEH 799 Query: 612 MSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS 671 SR+ AK + G K +GSVS+KTD V+ G GSK KA+ELGI +IDE + LL + Sbjct: 800 FSRESAKEAIERRGGKASGSVSRKTDWVVVGANPGSKATKAEELGIPIIDEQQFDTLLAT 859 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 257/749 (34%), Positives = 366/749 (48%), Gaps = 97/749 (12%) Query: 18 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP--LAAFSQIRH 75 H+ Y+ P I D+EYD + + HP RVGA P + +I H Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYDAIAAAHPTAAKAGGARARVGATPDGASGLEKIAH 61 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-------VTWCCELKLDGLAVSILYENG 128 VPM SL N FD AF KRV+ E + +C E K+DG + S+ YENG Sbjct: 62 AVPMRSLGNAFDVGQVEAFMKRVEKLRGETEGEAATTTAIEYCAEPKVDGASASLRYENG 121 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 LV A +RGDG GED+T ++ R +P+KL E PA LE+RGEV + F+++N + Sbjct: 122 ELVYAVSRGDGEMGEDVTRHLIGARGVPMKLA-EPYPAVLEIRGEVHVADEDFQRVNAER 180 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVL-----EGGELPDTHLGRL 243 TG +VF N RNAAAG++R L + PL F YG G + E T L Sbjct: 181 AATGLRVFKNARNAAAGAMRTLVVD-DNQMPLRFLAYGWGAVGASNEETNAPWRTQSEFL 239 Query: 244 -LQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 G + + ++ E++ Y +E RPT+ ++IDGVV KVNS+ Q LG Sbjct: 240 SAFLPAQGFDAVPFLGVAKTIGELIEAYDALEIARPTMPYEIDGVVYKVNSVELQTALGA 299 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 AR PRWA+A KF A +T +R +E QVGRTGA+TPVA L+PV + G +S ATLHN D Sbjct: 300 DARQPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALTPVALLDPVDIGGASISRATLHNFD 359 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLS---------ERPEDTREVVFPTHCPVCGS 413 EI R L++G +V + RAGDVIP+VV++ E + E + P+ CP CGS Sbjct: 360 EIARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEASAYAEDIKPLPEWLPPSKCPDCGS 419 Query: 414 DVERVEGEA-------VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 V R A + RCTGGL C +Q E L HF +R A+D+ G+ ++ L + Sbjct: 420 SVVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLHFCARDALDIRGLARGTLETLHREG 479 Query: 467 YVHTPADLFKLTA-------GKLTGLERMG----------------PKSAQNVVNALEKA 503 V TPAD+F L + R +SA + A+E Sbjct: 480 VVKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSKGEIKHGSDGLKQSAVKLFQAIEVR 539 Query: 504 KE-TTFARFLYALGIREVGEATAAGLAAYFGTLEAL------------EAASIEELQKVP 550 ++ RF+YALGI +G TA LA ++G+L A + + L V Sbjct: 540 RQGVPLHRFIYALGIPNIGAHTAKVLATHYGSLAAFKKAALAAAKGGPASLAHAALTHVD 599 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP------------- 597 VG V+A + +F+ E N ++ E++A GV +++ SP Sbjct: 600 GVGPVLAQSLVDFWGEPGNAFIVDEIIATGVVVLDADASSSKNQPSPRFAEPASSSSVSP 659 Query: 598 --------------FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE 643 G ++ TG++ SRDD + G VA ++S+KT LV+AG Sbjct: 660 TPSPTVPSPEPTADLRGMKILFTGTIDGFSRDDVHDLIRAAGGDVASTLSRKTALVVAGV 719 Query: 644 AAG-SKLAKAQELGIEVIDEAEMLRLLGS 671 AG SKLAKA++L + ++D + + L S Sbjct: 720 GAGPSKLAKARDLAVPIVDASRFVSALTS 748 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 263/795 (33%), Positives = 364/795 (45%), Gaps = 133/795 (16%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L + + YH P DA YD L LE HP +I DSP VGA P Sbjct: 86 MASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALHPAMIREDSPIGAVGAKPA 145 Query: 68 A--AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--------KVTWCCELKLD 117 A A Q+ H VPM SL N FD++ AF RV L E + +C E K+D Sbjct: 146 AWSALPQVEHAVPMRSLGNCFDDDDVRAFVARVTRALGPPERFDDDARAPLRFCAEPKID 205 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVF 175 G + S+ Y +GVLV AA+RGDG GED+T + I P L G + PA LE+RGEVF Sbjct: 206 GASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTLTGRAGDWPATLEIRGEVF 265 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPR----ITAKRPLTFFCYGVGVLE 231 + F +N G F + RNAAAG++R+L+P A R L F YG G ++ Sbjct: 266 IADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDGADAGRYLRFLAYGWGEVK 325 Query: 232 GGE---LPDTHLGRLLQFKKWGL-PVSDRVTLCESAEEVLA-FYHKVEEDRPTLGFDIDG 286 + L GL PV + + ++A + +E DR +LG+ +DG Sbjct: 326 PQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAGSHAALERDRASLGYRVDG 385 Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLE-P 345 VV KV+ +A Q LG +RAPRWA A KF A+ +T +R V+ QVGRTGA+TPVA L+ P Sbjct: 386 VVYKVDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVDVQVGRTGALTPVATLDPP 445 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 V + G V+ ATLHN +++ R GLR+G +VV+ RAGDVIP+VV VV E+ V P Sbjct: 446 VALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRVVRVVAEG-EEEGAVVATP 504 Query: 406 THCPVCGSDVERVE---------------------------------------------G 420 T CP CGS V + Sbjct: 505 TRCPACGSAVSKTPLAASVKCPKKRLSSPYESGDAASSSFAAVDDESEDATSSPSSSSSS 564 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA- 479 AV RCTGG C AQ E + HF SR A+DV G+ K I L++ + +PADLF + A Sbjct: 565 AAVLRCTGGWRCPAQALERVAHFASRDALDVRGLARKQIADLLDAGVIASPADLFTMRAR 624 Query: 480 -------------------------------GKLTGLERMGPKSAQNVVNAL-EKAKETT 507 E +SA+ + +AL E A Sbjct: 625 FEHLGVDPDASGEDDDARGDGGGVAVPEFWTYASGKDEGKLKRSAKKLFDALDETAAGVP 684 Query: 508 FARFLYALGIREVGEATAAGLAAYFGTLEALE-------------------AASIEELQK 548 RF+Y+LGI +VG TA L+ + TL+A + + Sbjct: 685 LHRFIYSLGIPQVGLTTAKLLSRKYRTLDAFRDAAEEAAAAKAAASADAAASTEAPAMTD 744 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAE------------GVHWPAPIVINAEEIDS 596 + +G VVA+ + F++E +N NV+ ++L A Sbjct: 745 IDGIGPVVAATIGEFWSERANVNVVDDMLRNGVVVSDDASPPDASDASDASNAAAASATG 804 Query: 597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQEL 655 P G VV+TG++ M+R++A + G +VS KT +++ GE AG K A+ Sbjct: 805 PLTGYAVVVTGAVPGMTREEAFDAVAAAGGSPQKAVSGKTHVLVVGEGAGRRKAEAAEAR 864 Query: 656 GIEVIDEAEMLRLLG 670 G+ VID LR+L Sbjct: 865 GVAVIDAEAFLRVLA 879 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 229/681 (33%), Positives = 314/681 (46%), Gaps = 28/681 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + LR Y+ + DA YDRL L ET+HP + P SPT V Sbjct: 25 RSEYEAALRRLREASQAYYGDGDSVMDDASYDRLRLALLAWETEHPAEVAPGSPTTLVAD 84 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A + H +LSLDNVFD E +A+ V+ RL + E K+DG AV+ Sbjct: 85 GAAPA-GDVAHTTRLLSLDNVFDAEGLVAWGASVERRLGRAPAGGFTVEPKIDGAAVAAR 143 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV TRGDG+ GEDI+ + I +P L GE A +EVRGEV Q FE Sbjct: 144 YRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELLAGE---ATVEVRGEVAFTQEQFEVA 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP---DTHLG 241 N G VFANPRN AG+LR D + +TF+ YG LEG T Sbjct: 201 NAVRVAHGAPVFANPRNGTAGTLRAKDRPYRLR--MTFWAYGAVELEGVPFLPAGATQAE 258 Query: 242 RLLQFKKWGLPVSDRV----TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 L G+ + + + + R L IDGVVIK+N A+Q Sbjct: 259 ALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAMAAMRAELPVGIDGVVIKLNDTAEQ 318 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E +G R P WA+A K PA E+ T + DV ++VGRTG + P A L PV + G V+ AT Sbjct: 319 EAIGSGTRFPYWAIAVKLPAVERQTVLEDVVWEVGRTGVLAPTAVLAPVEIDGSTVTRAT 378 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN +I R L IGD V + +AGD+IP+V V RP + V P CP CG ++ Sbjct: 379 LHNPADIRRRDLHIGDTVTVYKAGDIIPRVQAAVALLRPAGAKPVPLPETCPRCGGEINT 438 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 + RC G C +++ R +D+DG+G + LV+ V ADLF L Sbjct: 439 AQER--WRCAKGTSCA--LPALIEYAAGREMLDIDGLGKTYVAALVDSGDVTDVADLFTL 494 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEA 537 T +LT + A + +E AK +R ALG+ G + + +A +F T+EA Sbjct: 495 TLEQLTAASG-SSRRAAKLAEQIEAAKARPLSRVFCALGVLGTGRSMSRRIARHFVTMEA 553 Query: 538 LEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSP 597 + A E+Q V +G A + A + VI +L+A GV P P Sbjct: 554 IRRADAAEMQDVEGIGPEKAPVIVEQVA--ALAPVIDKLIAAGVTLHEPEASATASAGGP 611 Query: 598 FAGKTVVLTGS----LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE----AAGSKL 649 GK VV+TG L R + A + + G + VS +T +++ SK Sbjct: 612 LDGKVVVVTGKMAGPLEGFGRTEMNALIEKAGGRAGSGVSARTSVLVCAPSASGKPSSKA 671 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA ELG+EV+ L+ Sbjct: 672 VKAAELGVEVLTPEAFAELVA 692 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 209/471 (44%), Positives = 276/471 (58%), Gaps = 9/471 (1%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + + T L +R ++ Y+V DAP DA YD MREL LE +HP L TPDSPTQ+V Sbjct: 16 EVRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPGLRTPDSPTQQV 75 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 G F+ + H MLSLDN F E +A+ +RVQ L++ V + CELK+DGLA++ Sbjct: 76 GGTFSTEFTAVDHVERMLSLDNAFSREDLVAWAERVQRDLESTVPVEYLCELKIDGLAIA 135 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE--NIPARLEVRGEVFLPQAG 180 +LYE G LV AATRGDG TGED+T NVRTI IP L G+ P +E+RGEVFLP Sbjct: 136 LLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRGEVFLPVDA 195 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDT-- 238 F +NE G FANPRNAAAGSLRQ DPR+TA RPL + +G+G L G+ T Sbjct: 196 FRALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTWGDGRGTGI 255 Query: 239 --HLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 WG+P S + S +EV E R + +IDGVV+KV+ +A Sbjct: 256 DRQSQVYDLLAGWGVPTSTHTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVVVKVDDIAL 315 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 Q +LG +RAPRWA+A+K+P +E T + +E +GRTG TP A +EPV VAG V A Sbjct: 316 QRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLVAGSTVRQA 375 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPED--TREVVFPTHCPVCGSD 414 TLHN D ++ G+R+GD VV+R+AGDVIP++V +D E P CP CG+ Sbjct: 376 TLHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPADCPECGTP 435 Query: 415 VE-RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVE 464 + EG+ RC C AQ + L+H SR A D++ +G+ L + Sbjct: 436 LRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGEVTAAALTQ 486 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 100/220 (45%), Gaps = 45/220 (20%) Query: 493 AQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA------------ 540 A+ +++ L+ AK R + AL IR VG A LA FG++ AL A Sbjct: 586 ARTLLDQLDLAKTKELWRAIVALSIRHVGPTAARALAQEFGSMAALRAVVDPTARGAVDA 645 Query: 541 --------ASIEELQK----------------------VPDVGIVVASHVHNFFAEESNR 570 A ++ + V VG +A + ++FAE +R Sbjct: 646 PQEAVDGGAVADDAVEGSIADEDGAPAADAAAVARLAGVEGVGPTIARSLLDWFAEPWHR 705 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 ++ A GV E G TVV+TGSL + SRD AK ++ G K +G Sbjct: 706 EIVDRWAAAGVVMQD---AVDESTPRTLEGVTVVVTGSLERFSRDGAKEAILGRGGKASG 762 Query: 631 SVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 SVS+KTD V+ GE AGSK KA+ELG+ ++DEA LL Sbjct: 763 SVSRKTDFVVVGENAGSKETKARELGLRILDEAGFEALLA 802 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 196/481 (40%), Positives = 269/481 (55%), Gaps = 16/481 (3%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ + + + + Y++ D+P DA YD MR L LE P L P SPT R Sbjct: 60 EAAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHR 119 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCCELKLDGL 119 VG + F +RH M+SLD+VF E + V L E + CE+K+DGL Sbjct: 120 VGGSFSNDFVSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGL 179 Query: 120 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL--HGENIPARLEVRGEVFLP 177 A++++Y NGVL TRGDG TGEDIT NVRTI +IP L E++P +E+RGEVF+ Sbjct: 180 ALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGEVFMR 239 Query: 178 QAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG----- 232 F +N + G FANPRNAAAGSLRQ DPRITA R L+F+ +G+G L Sbjct: 240 WDDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWGADHP 299 Query: 233 ---GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 ++ + +WG+PVS S +E+L E R + +DG+V+ Sbjct: 300 RGTHDVVADQSQAYDLYTRWGVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHALDGIVV 359 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KV+ L Q LG +RAPRWA+A+K+P +E T + ++ QVGRTG +TPVA L+PV+VA Sbjct: 360 KVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLKPVYVA 419 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDT---REVVFPT 406 G V+ TLHN E++R G+ IGD VV+R+AGDVIP++V VL R RE V P Sbjct: 420 GSTVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLREFVMPE 479 Query: 407 HCPVCGSDVER-VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 CP CG+ + EG+ RC C AQ E + SR+A D++ +G++ L Sbjct: 480 FCPSCGAKLAPAKEGDKDIRCPNVESCPAQLTERVISLASRKAFDIEHLGEQSAIALTNP 539 Query: 466 E 466 E Sbjct: 540 E 540 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 3/193 (1%) Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + + R G + + + + ++KA+ R L AL IR +G TA +A+ G+L A+E Sbjct: 726 DVPVIIRPGENT-RKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLAAIEK 784 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPF-- 598 A+IE+L + VG +A V N+FA V AE P Sbjct: 785 ATIEDLTAIDGVGPEIAESVVNWFAATREPGDWRGATLRAWQAAGVGVDEAETSSLPQTL 844 Query: 599 AGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 AGKTVV+TGSL SRD AK ++E G K AGSVSKKTD V+ G AGSK KA+ELGI Sbjct: 845 AGKTVVVTGSLEGYSRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKAIKAEELGIP 904 Query: 659 VIDEAEMLRLLGS 671 ++ E + +LL + Sbjct: 905 MLGEIQFAQLLET 917 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 197/619 (31%), Positives = 320/619 (51%), Gaps = 49/619 (7%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 +++++ L + Y+ + + D EYD L EL++ E +SP+ V Sbjct: 7 DLDRRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHA-KGFSDRNSPSLTV 65 Query: 63 G-AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G AA L F ++H PMLSLDNVF + ++ ++ + ++ T+ CELK+DG+ V Sbjct: 66 GIAAQLNLFEPVKHIEPMLSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGV 125 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S+ Y NG L+SAATRGDG GEDIT N+ + +IP ++ +P E+RGE F+ + F Sbjct: 126 SLRYANGYLISAATRGDGAIGEDITQNMLYVPSIPPRI---ALPGIFEIRGEAFIKRDEF 182 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGG-------- 233 ++IN+ + K FANPRN +G +R P + ++F+ +G + G Sbjct: 183 DRINQLSLERS-KQFANPRNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLH 241 Query: 234 -----------ELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 E+ + + +PV+ LC + E+ ++ + +R + + Sbjct: 242 SDITASGGVKTEIEHGMFSAYSRLSECKIPVNSYNRLCTNFSEIESYIENIRLNRQCVPY 301 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 IDG+V+K++SL +Q LG +APRWAVA+KFP++ +T + D+E VGRTG +TP A Sbjct: 302 AIDGIVVKIDSLQKQALLGSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAV 361 Query: 343 LEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREV 402 L+P+ + G VS ATLHN I L IGD V IR+AGD++P+V+ + +R Sbjct: 362 LQPIQLDGSEVSRATLHNQKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKRDGSEVLF 421 Query: 403 VFPTHCPVCGSDVERVE-GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQ 461 P+ CP CG+++ + G+ RC C Q L++ SR +D+ + ++ Sbjct: 422 KMPSLCPSCGAELMPSKLGDIDLRCPNMQSCLVQLAGRLEYIGSRGVLDIAYLAEENAYA 481 Query: 462 LVEKEYVHTPA--DLFKLTAGKLTGLE-------------------RMGP--KSAQNVVN 498 L A LFK+T L LE KSAQ++V+ Sbjct: 482 LSHLRKFGKSAEVQLFKITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQDMVD 541 Query: 499 ALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVAS 558 ++E+AK + +FL AL IR +G A+A LA +FG++E++ A I+EL KV +G +A Sbjct: 542 SIERAKRSPLWKFLLALNIRHIGPASAKALADHFGSIESIINAKIDELLKVRSLGETIAI 601 Query: 559 HVHNFFAEESNRNVISELL 577 VH++F + +++ Sbjct: 602 SVHDWFRDPWRVELVNTWR 620 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 221/634 (34%), Positives = 321/634 (50%), Gaps = 24/634 (3%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 ++ E+ + + YH D P + D YDRL+RELR LE +HPEL SP Q V Sbjct: 13 DARERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSV 72 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA A F + H + SL +VF + + + E+K+DGLAV+ Sbjct: 73 GAPAAAGFENVAHLERLYSLQDVFTLDDLKEWYE------GTAGAARCTAEVKIDGLAVN 126 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y G LV ATRGDG TGED+T+NVRTI ++P L G + P +E+RGEVF+P A F+ Sbjct: 127 LRYVGGELVVGATRGDGVTGEDVTANVRTISSVPQSLRG-DFPDVVEIRGEVFIPLAKFD 185 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG-----GELPD 237 N R G K FANPRNAAAGSLRQ DP++ A+RPL F +G G ++G E Sbjct: 186 SFNARQRAAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRIDGTSSAVDEKLA 245 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQ 297 + G F++WG+PVS V L S ++V F + + R L IDG V K++S A+Q Sbjct: 246 SQKGLYELFQEWGVPVSPYVRLVSSWDDVEGFVREYADLRSDLIHGIDGAVFKIDSRAEQ 305 Query: 298 EQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 E LG +R PRWAVA+K+P +E T + D++ QVGRTG +TP A ++PV VAG V+ AT Sbjct: 306 EDLGATSRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKPVTVAGSTVAQAT 365 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 LHN E+ R G+ IGD VV+R+AGDVIP+V+ V + R RE P+ CP CG+++ Sbjct: 366 LHNPSEVARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMPSACPSCGTELAP 425 Query: 418 -VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 +G+ RC C AQ E + + SR A+DV+ +G++ L + E P L Sbjct: 426 AKDGDVDIRCPNARSCPAQLAERVAYIGSRAALDVEALGEETSLWLTDPER-RRPDALMA 484 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 G+ +E + V EK +E + I + A + FG + Sbjct: 485 FAEGRKLYIEGE-DGRTRAVCAPTEKLRELGVVD--HDGAIIDSEHIVAPDVQRSFG-IP 540 Query: 537 ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDS 596 A + ++ + ++ V + + W P + + Sbjct: 541 APQTPALSSEAGLFELVPESVQDVWIWQEVRVKGEPTGDFRRVRAAWTKPKWRRPQGKPA 600 Query: 597 PFA-----GKTV-VLTGSLSQMSRDDAKARLVEL 624 A GK + ++ L + ++V L Sbjct: 601 ELASPSKPGKMIELVVAELQAARTKELWRKIVAL 634 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 1/181 (0%) Query: 491 KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP 550 K + VV L+ A+ R + AL IR VG A +A+ FG+L A AS+EE+ ++ Sbjct: 610 KMIELVVAELQAARTKELWRKIVALSIRHVGPTAAKAIASSFGSLSAAREASVEEMAQID 669 Query: 551 DVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLS 610 VG V+A ++F + ++ A GV + E + G TVV TG+L+ Sbjct: 670 GVGRVIAQSFLDWFDVPWHTEIVEAWEAAGVVFADEAAERQE-LPQTLKGMTVVATGALA 728 Query: 611 QMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 +RD K + G K AGSVSKKT V+ G GSK AKA+ LG+ +DE + LL Sbjct: 729 GYTRDSVKEAIEARGGKAAGSVSKKTAAVVVGANPGSKAAKAEALGVPTLDEGQFEELLR 788 Query: 671 S 671 + Sbjct: 789 T 789 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 192/671 (28%), Positives = 314/671 (46%), Gaps = 37/671 (5%) Query: 7 QLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 66 ++ EL L Y+ + + EYD L EL+ LE + ++ SPT VG Sbjct: 6 RMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEE-SGIVLAASPTVNVGYEA 64 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 126 ++ ++ HE MLSL+ + + + L E + KLDGL V I Y+ Sbjct: 65 SSSLEKMAHEKKMLSLNKTKSVDELVEW-------LGEQEGL---LSPKLDGLTVVITYD 114 Query: 127 NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 G L A TRGDG GE IT N +T IPLK+ RL +RGE ++ F K+NE Sbjct: 115 EGSLKLAVTRGDGVEGEVITKNAKTFIGIPLKIP---YAGRLVLRGEAYITYGDFNKLNE 171 Query: 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF 246 + + NPRN +GS+R LDP IT +R + F + + + + Sbjct: 172 EIDDAAK--YKNPRNLCSGSVRNLDPSITKERRVRFKVFSMLGGIEH-GFNKKRECMKWL 228 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 G V T + E + + + E+ +DG+V+ + + LG A+ Sbjct: 229 GDIGFDVVH--TEMVTGENLKDTMNSLMEELQNGDIPVDGLVLTYDDIKTCNLLGETAKY 286 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 P+ ++AFK+ + T + VE+ RTG + PVA PV ++G V A LHN D ++ Sbjct: 287 PKDSIAFKWSDELYDTELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRAALHNLDILDG 346 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVAR 425 L L GDK+ + +A +IPQV + + + +P CPVCG ++ EG V R Sbjct: 347 LALGKGDKIRVYKANMIIPQVYENITR-----SGNIEYPKVCPVCGCGLKLETEGARVLR 401 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT--AGKLT 483 C C A+ + + HF + +++ G+ +K I++L+ + DL + ++ Sbjct: 402 CVND-DCPAKNAKRIVHFAGKSGINIKGISEKTIEKLIATGIIRNEVDLLDIENYKDEIL 460 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFG-TLEALEAAS 542 L+ KS +N+ A++ AK T RF+ A+ +G A +AA G + L + Sbjct: 461 KLDGFKEKSFENLKKAIDGAKTMTLQRFISAMAFTGIGYTNAGKIAAALGFDVMKLFELT 520 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 E++ + +G V+ ++E+ + + E++ N E GK Sbjct: 521 PEKINNIEGLGEVLTESFMAELSDENMKRRMREIIKRCKFKEITRTRNDE-----VDGKK 575 Query: 603 VVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKAQELGIEV 659 V+TG+++ +RDD K ++ G +V SVS TD +I E+ SK KA+ELGI + Sbjct: 576 FVITGNVNIFKNRDDLKQKIEISGGQVVSSVSSNTDFLINNDRESTSSKNKKAKELGIAI 635 Query: 660 IDEAEMLRLLG 670 I E ++ +LG Sbjct: 636 ISEKDIAEMLG 646 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 197/508 (38%), Positives = 268/508 (52%), Gaps = 47/508 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+ +Q++ L + Y+ DAP + DAEYD L +ELR LE +P+L DSPT+ Sbjct: 19 ETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAEDSPTRT 78 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 VG A A I H M SLDNVF E + L +V + ELK+DGLA+ Sbjct: 79 VGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGG--EVRYLTELKIDGLAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 ++ YE+G LV+AATRGDG TGED+T N I IP +L G PA +EVRGEVF+P A F Sbjct: 137 NLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVRGEVFMPTADF 196 Query: 182 EKINEDARRTGG----------------------------------KVFANPRNAAAGSL 207 E++N+ FANPRN AAG L Sbjct: 197 ERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFANPRNTAAGGL 256 Query: 208 R-QLDPRITAKR--------PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVT 258 R QLD + +R L +G+G + + WGLP S + Sbjct: 257 RQQLDKKEGLEREAGEARLAALRLTVHGLGAWPDPPV-GSQSEMYELLASWGLPTSRYMD 315 Query: 259 LCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQ 318 + +S +EV A+ E R L +IDG+V+KV+S AQQ LG +RAPRWA+A KFP + Sbjct: 316 VVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPRWAIAVKFPPE 375 Query: 319 EQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIR 378 E T + D++ QVGRTG +TP +EPV VAG V ATLHN ++ER G+ IGD +V+R Sbjct: 376 EVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKGVLIGDTIVLR 435 Query: 379 RAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV-EGEAVARCTGGLICGAQRK 437 +AGDVIP+++ V S R R V P CP CG+++ EG+ RC C AQ Sbjct: 436 KAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPEREGDKDWRCPNQRDCPAQVT 495 Query: 438 ESLKHFVSRRAMDVDGMGDKIIDQLVEK 465 ++H SR A D++ +G++ L + Sbjct: 496 GRVEHAGSRGAFDIESLGEESAIALTDP 523 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 116/248 (46%), Gaps = 44/248 (17%) Query: 464 EKEYVHTPADLFKLTAGKLTGLERMGP--------------------------------- 490 ++ + T ADLF LT L G+ P Sbjct: 587 QQGVITTGADLFDLTPEGLEGVFVWQPERRNGEPTGDWRIQPAFWSRPQFRHYKRDEEWR 646 Query: 491 --------KSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 KS + +++ LEKAK R L AL IR VG A LA +G+++A+ AS Sbjct: 647 QQKAPSVLKSTEVLISELEKAKSQPLWRVLVALSIRHVGPTAARSLATAYGSMDAIREAS 706 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E+L VG ++A V +FA + +R ++ GV + E G T Sbjct: 707 VEQLSDTDGVGEIIAEAVVEWFAVDWHRELVDGWARSGVRMADEV---EEGFTKTLEGLT 763 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE 662 VV+TG L +RD AK ++ G K +GSVSKKTD V+ GE AGSK KA+ELG+ ++DE Sbjct: 764 VVVTGGLEGFTRDGAKEAIITRGGKASGSVSKKTDFVVVGENAGSKETKARELGLRILDE 823 Query: 663 AEMLRLLG 670 A + LL Sbjct: 824 AGFVALLE 831 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 230/732 (31%), Positives = 320/732 (43%), Gaps = 159/732 (21%) Query: 3 SIEQQLTELRTTLRHHEYLYH----VMDAPEIPDAEYDRLMRELRELETKHPELITPDSP 58 I+ + EL + Y+ + DA+YD L L+ LE +P L+TPDSP Sbjct: 10 QIQNEHQELVAQIEAARADYYDNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVTPDSP 69 Query: 59 TQRVGAAP-------------------------------LAAFSQIRHEVPMLSLDNVFD 87 TQ VG F H M S+D+VF Sbjct: 70 TQTVGGGAGGGGGVKRAAAATTEAVGAAHVPENAVAVATTEGFPPHTHAKRMQSIDDVFS 129 Query: 88 EESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITS 147 A+ +RV+ L+ T E+K+DGLA+S+ Y +G L++ ATRGDG GED+T+ Sbjct: 130 TAEVDAWWERVEKGLEGK-PFTVSAEVKVDGLAMSLTYVDGQLMTGATRGDGRVGEDVTA 188 Query: 148 NVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGG-------------- 193 NVRTI+ +P L G IP +E+RGEV+LP F ++N + Sbjct: 189 NVRTIKTVPQTLGGTVIPHLVEIRGEVYLPLEDFAQMNAEREANNAAWEAARAAGDKEKL 248 Query: 194 ------KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV----LEGGELPDTHLGRL 243 +FANPRNAA GSL+Q D AKRPL F +G+G +G T Sbjct: 249 KTLKKMPLFANPRNAATGSLKQKDSIEAAKRPLAFLAHGLGAVQGWPDGVSPMATQEDFY 308 Query: 244 LQFKKWGLPVSDRV--------TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 Q + WG+P R + +V A + E R IDGVV+KV++LA Sbjct: 309 RQLEVWGIPSVRRTPQSLGLRMAGLTTLTQVHAVLAAMTEHRHDFSHQIDGVVLKVDNLA 368 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 + LG ARAPRWA A+KFP +E T + +E QVGRTG +TP A +E V V G VS Sbjct: 369 ARVLLGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPFAVMERVLVDGSYVSR 428 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 ATLHNA E+ R +R GD VV+R+AGD+IP+V+ VLS RP E V P CP CG+ + Sbjct: 429 ATLHNAKEVARKDVRPGDTVVLRKAGDIIPEVLGPVLSLRPGGLPEWVMPEMCPSCGTRL 488 Query: 416 ERV-EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE-------- 466 + EG+ RC C AQ E L H +R A+D++G+G++ L + E Sbjct: 489 GQEKEGDIDLRCPNQAGCPAQITERLIHVGARGALDIEGLGEEGALALTQPEAGRADVAA 548 Query: 467 ---------------------------------------YVHTPADLFKLTAGKLTG--L 485 + + A LF L + L + Sbjct: 549 ALSAGGSCMLEDGTEIRVPAGKPLELGAIESLLPPTQEPVLRSEAGLFDLKSKDLRDVFV 608 Query: 486 ERMGPKSAQNVVNAL----EKAKETTF--------------------------------- 508 R P +A + K K T Sbjct: 609 WREVPGTAGRDWQQVRFFWAKPKRVTAAEAATFGLVAGELGEPVAGKTVETFFNQLAAAR 668 Query: 509 ----ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFF 564 R L AL IR +G A +A F TL A+ AA +E L +V VG V+A+ V ++F Sbjct: 669 SKETWRVLVALSIRHLGPVAARAVARRFPTLAAVAAADVEGLSQVEGVGAVIAASVVDWF 728 Query: 565 AEESNRNVISEL 576 ++ ++ Sbjct: 729 RVPWHQEIVLAW 740 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 51/79 (64%) Query: 592 EEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAK 651 EE + AG T+V+TG++ +R+ A+ + + G K GSVSKKT +V+AG AGSKLAK Sbjct: 833 EEPEQTLAGLTLVITGNIPGFTRESAQLAVEDRGGKATGSVSKKTSVVVAGTGAGSKLAK 892 Query: 652 AQELGIEVIDEAEMLRLLG 670 A+ LGI VI E LL Sbjct: 893 AEALGIPVIPAEEFPALLE 911 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 198/700 (28%), Positives = 319/700 (45%), Gaps = 65/700 (9%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL-----ITPDSP----- 58 L +R + Y + AP IPD YDRL+ LR L+ HP L TP+ P Sbjct: 33 DTLAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEAD 92 Query: 59 -TQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLD 117 T + + +RH MLSLD + E ++ ++ + K+D Sbjct: 93 ATASIP-PAERLGAPVRHTRAMLSLDKCYGPEDLYSWTEKFEG--------EVLVMPKMD 143 Query: 118 GLAVSILYE-NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPAR--------- 167 G+A S+ Y+ G L AATRG+G+ GEDIT NV + +P +L Sbjct: 144 GVACSLRYDAEGKLFLAATRGNGSEGEDITVNVLEVEDVPQQLDPAAFAELPGPDGAAPA 203 Query: 168 LEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGV 227 +EVRGE+F+ + FE+ E ++NPRN AG+++ + T L+F+ Y + Sbjct: 204 VEVRGELFMKLSVFERYKEQ--------YSNPRNLTAGAIKHKERGKTKAYTLSFYAYDL 255 Query: 228 GVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR--PTLGFDID 285 E T + + G V + + E+ A Y + R + ++ID Sbjct: 256 QGTELP----TEREKFASLRALGFAVEECDFVPRG--ELQAAYERWSARRSADEIDYEID 309 Query: 286 GVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEP 345 GVV + + +A+Q ++G PRW++A+KF T + +V + V RTG ITPVA +P Sbjct: 310 GVVYRASEVAEQRRMGETGHHPRWSMAYKFQGDTGTTTLEEVLWSVSRTGTITPVAIFKP 369 Query: 346 VHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFP 405 + ++G +++ A L N + + LGL G + + R G VIP V VV +T P Sbjct: 370 IELSGAMIARAGLFNLNHFDELGLTAGAAIEVTRRGGVIPYVERVVTPGAEGET--FDIP 427 Query: 406 THCPVCGSDVERVE--GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV 463 CP C S+ R + C+ CG+ R L+HF + +D+ G G K++ Q V Sbjct: 428 KRCPACNSEAVRRKKRDGEFLYCSKPEGCGSARLGELQHFA--KVVDIQGFGPKVVTQAV 485 Query: 464 EKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 + + +PAD + L L +R+G +SA+N+V ++ + FL +LGI +G+ Sbjct: 486 DAGLLSSPADFYTLRVEDLEEFDRLGRRSAENLVAQVDAHRRIELPIFLQSLGIDHLGKQ 545 Query: 524 TAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESN-----RNVISELLA 578 A LA F TL + S E L +V + +A + + ++ + Sbjct: 546 NAVLLANEFRTLAGVRGVSREALLEVKGIKDAIADALLAGLETRAELIDALLEHVTVVDL 605 Query: 579 EGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDL 638 A A + GKT + TG+L +R A+ ++ G A VSK D Sbjct: 606 PERDPEAEAEAAAAAAEGALGGKTFLFTGALEAFTRKQAQEKVEANGGVPASGVSKSLDY 665 Query: 639 VIAGEAAG---SKLAKAQEL-----GIEVIDEAEMLRLLG 670 ++ G G SK KA++L ++VI E + L ++G Sbjct: 666 LVVGAGKGAKSSKQKKAEKLIDGGAALKVISEGDFLAMIG 705 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 198/681 (29%), Positives = 325/681 (47%), Gaps = 35/681 (5%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT-------PDSPTQRV 62 EL L+ + + Y+ + + D YD + EL + PE S ++V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 63 G--AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 + +H+ MLSL+ + E + R+ + NN + + K+DG++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNH--QYILQEKIDGVS 131 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 +S+ YENG+L A TRGDG GE++T N I+ IP + NI +E+RGE+F Sbjct: 132 ISLYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTI---NIKENIELRGEIFFSLKL 188 Query: 181 FEKI-NEDARRTGG---KVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP 236 FE + NE + G K + PRN A+G L+ L L+ F Y V E L Sbjct: 189 FESLKNEFLDKQDGTKNKKWNTPRNKASGILKSLK-TTDESSWLSCFIYEVVSPENFNL- 246 Query: 237 DTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 T K G + + E+ + F + + ++IDG+VIK+N L+ Sbjct: 247 KTQKQLFDFLKIQGFNL-PKFEFIENENLIENFITNFKFEDDQRDYEIDGLVIKLNDLSL 305 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 + LG ++ ++A+KF + MT + D+ VGRTG IT A+L+ V + G + A Sbjct: 306 YDLLGKTSKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKAA 365 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 TLHN + I+ + + IGDKV I +AG++IP+VV +V + ++ CP C + + Sbjct: 366 TLHNYEYIKNIKINIGDKVYIEKAGEIIPRVVKLVSPKNDQNY--FSPIEFCPSCKNKLS 423 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 E C C ++ + LK+FVS+ M++ +G K I+ K +V D++ Sbjct: 424 WSENMLNQFCLNP-DCIEKKIQKLKYFVSKDGMEIQELGGKKIELFFAKGWVKKIEDIYN 482 Query: 477 LT--AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF-- 532 L L LE S +++ +E++K+ + + ALGI+ +G+ A L Sbjct: 483 LKNNYDDLLKLENFQEHSVNVLLHKIEESKDVYTWKLIAALGIKNIGKKLAKSLVKIIFE 542 Query: 533 ---GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 L +L + +EL+K + G V + FFA + NRN+I L G I Sbjct: 543 NDQKNLLSLLEFNYDELEKYDEFGSVKIESLKEFFANDENRNLIQFLDQNGFELKMEKEI 602 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKL 649 + KT ++TG+L + RD K +++ G ++ S+SKK D +I G+ GSK Sbjct: 603 IQ---STKLENKTFLITGTLEK-PRDFYKNLIIQNGGIISSSISKKLDYLIVGQNPGSKE 658 Query: 650 AKAQELGIEVIDEAEMLRLLG 670 KA EL I++IDE + ++L Sbjct: 659 KKAMELNIKIIDEEFLKKMLE 679 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 189/683 (27%), Positives = 300/683 (43%), Gaps = 53/683 (7%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 +++ L L Y+ + D E+D +L++LE + +I PDSPTQ V A Sbjct: 3 KEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEE-TGIILPDSPTQNVSAD 61 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 +A + HE P LSL E + + KLDGL + + Y Sbjct: 62 NVAG-KKEEHEFPALSLAKTKKVEDLAKWAE----------NKPIWLSWKLDGLTLVVTY 110 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 +NG L TRG+G G +IT I I + L +RGE + FE+ N Sbjct: 111 DNGKLTKVVTRGNGHIGTNITHLSTAIDGILQTIP---YKGHLVIRGEAVISYPDFEQFN 167 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 +A +ANPRN A+GSL D R L + + + E E ++ GR+ Sbjct: 168 MEAEEE----YANPRNLASGSLTLKDINEVKARHLRWIPFTLVYTE--EEINSWGGRMEW 221 Query: 246 FKKWGLPVSDRVTLCE-SAEEVLAFYHKVEED-----RPTLGFDIDGVVIKVNSLAQQEQ 299 + G V DR + + + + A H E + +DG+VI Sbjct: 222 LEHQGFRVVDRELIEQPTVNNIEAVIHHWTERVTGVSSSPFPYPVDGLVISYEDTVYAAT 281 Query: 300 LGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 R AFK+ + T + +E+ + I+PVA P+ + G V A+L Sbjct: 282 GSVTGHHATRAGYAFKWQDESAETELDYIEWSCAAS-TISPVAVFRPIELEGTTVKRASL 340 Query: 359 HNADEIERLGLR-IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 N E ERLG+ G K+ + +A +IP+V+NV+ E P CPVC S E Sbjct: 341 CNISECERLGIGDKGTKIAVIKANKIIPKVINVI-----ESVGTFHIPETCPVCHSATEV 395 Query: 418 VEGEA----VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPAD 473 E E CT C A++ + FVS+ +++DG+ ++ + + + +V AD Sbjct: 396 SESEVSGTRTLHCTNTH-CPAKQLKKFGRFVSKEGVNIDGLSEQTVQKFINLGWVREYAD 454 Query: 474 LFKLTAG--KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 LF LT +L +E G KS ++ A+EKA+ R L+AL I VG+ L + Sbjct: 455 LFHLTEHATELRTMEGFGNKSVTKLLAAIEKARNVEARRLLFALNIPLVGQDVCNRLLSA 514 Query: 532 FGTLE----ALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 + E A+E+A+ + + +G ++ + + N++++ LLAE Sbjct: 515 YPLEELIKTAIESAAEDVFSTIAGIGPEKSASFVRWMKDTDNQSMLQHLLAE----LNVS 570 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EA 644 ++ G T V+TG + +R++ KA + G KV GSVSK T+ +I E+ Sbjct: 571 QPSSAPTGDSCQGLTFVVTGDVHHYKNRNELKAYIESQGGKVTGSVSKSTNYLINNDVES 630 Query: 645 AGSKLAKAQELGIEVIDEAEMLR 667 K KA+EL I +I E E + Sbjct: 631 TSGKNQKAKELSIPIISEDEFIA 653 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 204/456 (44%), Positives = 285/456 (62%), Gaps = 11/456 (2%) Query: 104 NNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN 163 E++ W E K+DGLAVS+LYENGV ATRGDG G++IT N++T+R+IPL+LHG+ Sbjct: 3 PGEQLEWLVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKG 62 Query: 164 IPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFF 223 P LEVRGEV+LP AGF++I E+ G + FAN RN AAG+L+QLDP + AKRPL Sbjct: 63 APEVLEVRGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIV 122 Query: 224 CYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFD 283 YG+G + + P T L K +GL +C +AEEV+ +++ R GF+ Sbjct: 123 LYGLGEIS-VDPPPTQAALLEWMKAFGLRTPKFTRVCHTAEEVMKAIDELDSIRDGFGFE 181 Query: 284 IDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARL 343 DG VIK+NS+ Q+E++G+ +RAP+WA A+K+ +++ T + + QVGRTG +TPVA L Sbjct: 182 TDGAVIKLNSIEQRERVGYHSRAPKWAKAWKYVSEQAETVLESITIQVGRTGVLTPVAEL 241 Query: 344 EPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV 403 PV + G +S ATLHN DEI+R +RIGD V+I +AG+VIP VV VVL +RP + Sbjct: 242 RPVFLRGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFP 301 Query: 404 FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV 463 FP CPVC S +R AV C + C AQ L++F R A+D+DG+G + D+LV Sbjct: 302 FPHECPVCHSQAKRDPNFAVWVCEN-VNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLV 360 Query: 464 EKEYVHTPADLFKLTAGKLTGL--------ERMGPKSAQNVVNALEKAKETTFARFLYAL 515 E+ V P DLF+L +L L G K+A V A+++AK AR+L+AL Sbjct: 361 ERSLVRDPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHAL 420 Query: 516 GIREVGEATAAGLAAYFGTLEALEA-ASIEELQKVP 550 I EVGE TA LA + +LEA+ A + ++ + Sbjct: 421 AIPEVGEETAHDLAKHHPSLEAVRDSAMLRDVVALD 456 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 96/247 (38%), Gaps = 29/247 (11%) Query: 435 QRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE----------YVHTPADLFKLTAGKLTG 484 Q H A+ + +G++ L + + L +L Sbjct: 411 QPLARWLH-----ALAIPEVGEETAHDLAKHHPSLEAVRDSAMLRDVVALDRLHGEAEES 465 Query: 485 LER-MGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 R K + ++ A G R + AA S Sbjct: 466 NPRGKRNKDKTELEKQKLASRHAEVIAEANAAGRRLLEAGFAAPAKKK----------SA 515 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTV 603 + V VG VVA ++FA ES + L + AP D FAGKT Sbjct: 516 TDADVVTVVGPVVAQAALHWFAGESGHETLKRLHHLHI---APKGATPGAGDQAFAGKTF 572 Query: 604 VLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEA 663 VLTG+L +M R+ A ++ LG V+ SVS+KT V+AG AGSKL AQ LG+ V+ E Sbjct: 573 VLTGTLEKMGRNAAAEKIRALGGNVSSSVSRKTSYVVAGPGAGSKLEDAQSLGVTVLSED 632 Query: 664 EMLRLLG 670 + L++L Sbjct: 633 QFLKMLA 639 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 175/684 (25%), Positives = 290/684 (42%), Gaps = 47/684 (6%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I+ ++ EL +L Y+ +P+ E+D + EL +LE + I DSPTQ Sbjct: 4 NKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKE-TGYIRHDSPTQN 62 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 G A ++ HE P LSL E + + KLDGL + Sbjct: 63 AGYEAEAG-NREPHEYPALSLAKTKSIEELKKW----------AGDMPIWLSWKLDGLTL 111 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+ G LV TRG+GT G +IT I P ++ + VRGE + F Sbjct: 112 VLTYDGGRLVKILTRGNGTVGSNITFLQDAISGFPKEIP---YKGHMVVRGEATISYTDF 168 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + +N+ K +ANPRN A+G+L D +R + F+ + + ++ + + Sbjct: 169 KLLNDTIEDDDEK-YANPRNLASGTLNLDDVEEVKRRHVVFYAFTLVHIDDDII--SWGD 225 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPT--LGFDIDGVVIKVNSLAQQEQ 299 R+ V A + + D + + +DG+VI + A Sbjct: 226 RMSYLSDMKFNVVK--REATDAAGLDEAVKRWTRDVESGRMDVPVDGLVICYDDTAYAAG 283 Query: 300 LGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 R AFK+ + T +R +E+ + I+PVA EPV + G VS A+L Sbjct: 284 GSVTGHHATRAGFAFKWQDEAVDTRLRYIEWSCAVS-TISPVAVFEPVQIEGTTVSRASL 342 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE-- 416 N EIERLG+ + + +A +IP+ + V + EV P CPVC Sbjct: 343 CNLTEIERLGVGKECTLSVIKANKIIPKCIAV-----KDAVGEVEIPKECPVCHHPTRIF 397 Query: 417 --RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADL 474 + G CT C A+ + FVS+ MD+DG+ + + + + + ++ D+ Sbjct: 398 VSKNSGVKTLHCTNP-DCTAKNVKKFSRFVSKSGMDIDGLSVQTMLKFINEGFIKQFPDI 456 Query: 475 FKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYF 532 + L K++ +E G KS N+ A+EK++ ++AL I +G + Sbjct: 457 YHLPEHFDKISSMEGFGEKSCMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGKKIVNAI 516 Query: 533 ---GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 G + + A+ + + +G + + ++A + A V Sbjct: 517 GFDGFADRMRNAT--DFVDIDGIGQEKSGSILEWYANP---QNSTMFEALIKELDIEKVD 571 Query: 590 NAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAG 646 + + GKT V+TG + +R + KA + G KV GSVSKKTD ++ E+ Sbjct: 572 IKDMSEGSLNGKTFVITGDVHDFANRSEFKAYVESQGGKVTGSVSKKTDYLVNNDTESTS 631 Query: 647 SKLAKAQELGIEVIDEAEMLRLLG 670 SK KA+ELGI +I E + + G Sbjct: 632 SKNKKAKELGIPIISEDTFIEMFG 655 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 215/688 (31%), Positives = 323/688 (46%), Gaps = 49/688 (7%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E++ TT Y D E+ DAE+DRL+ ++ E + I P+ Sbjct: 37 EEEYQAAVTTALSAAKAYETTDVEEMNDAEFDRLLAKIASHEAANG--IEPEHDLHDTIG 94 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 A + H PM SL+ E++ + F + E K+DGLA+S+ Sbjct: 95 HGGAGGGDVEHATPMKSLEK-PGEDAVIEFAAKHPKA---------VIEPKIDGLAISVR 144 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 YENG +V AA RGDG TGED+T VR + +P EVRGE++L K Sbjct: 145 YENGKMVRAARRGDGYTGEDVTDRVRGVDGLP----EMAGDGDYEVRGELYLNDENKAKA 200 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 N + G FAN RN AG L + D +F Y + E + HL + Sbjct: 201 NAIRQAAGKAPFANARNGVAGMLNKQDGSYAGL--FSFAAYSTTIDEKAD----HLDSMQ 254 Query: 245 QFKKWGLPVSD--RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 Q + G + AE+ +A + +R L F +DG V+KVN+ A++ +LG Sbjct: 255 QLEGMGFTTARSLLPQSVLDAEDPMAAIAALGAERKGLNFLMDGAVLKVNTAAERAELGE 314 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 +RAP+WAVA+K+PA E+ T + D+E+ +G+TG ++ ARL PV V G +V A+LHN Sbjct: 315 GSRAPKWAVAYKYPAVEEPTVIEDIEYNIGKTGRLSIRARLTPVEVDGSVVEYASLHNVG 374 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 ++ +RIGD V +A D+IPQV R E ++ P+ CP C ++ Sbjct: 375 HLQAADMRIGDTVSAYKANDIIPQVHLPRADLRDESSQPWQPPSVCPQCSEPFDKS--TE 432 Query: 423 VARCTGGLICGAQRKESLKHFVSRRA-MDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGK 481 + RC C + + SR A +D++G+G I D L+EK+ V +DLF L + Sbjct: 433 LWRCHTPE-CS--VSGRISYAASRDAGLDIEGLGGSIGDALIEKDLVKDVSDLFYLGEDQ 489 Query: 482 LTGLE----------RMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 L +E +G K+A ++ +EKAK R + AL +R G LAA Sbjct: 490 LAEVELGETSTGGTRTLGQKNAAKIMAEIEKAKSQPLNRVITALSMRFTGRTFGRRLAAE 549 Query: 532 FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINA 591 FGT+EAL+AA++ +L V +G A +H + + + P Sbjct: 550 FGTMEALQAATVSQLANVEGIGQKKAEVIHEQLKKNAPVIAKLREAGVNMGAPKAAPAAG 609 Query: 592 EEIDSPF----AGKTVVLTGS-----LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG 642 + VV+TGS L +SR + + G K +GSVSK TDL++ G Sbjct: 610 AKAPKLTKPDGKPMNVVVTGSVKGSPLGSLSRSGVQELIEAKGGKASGSVSKTTDLLVCG 669 Query: 643 EAAGSKLAKAQELGIEVIDEAEMLRLLG 670 E SK KAQELGI ++ E +++ Sbjct: 670 EPGSSKFLKAQELGIRIVTPDEFAQMVE 697 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 184/705 (26%), Positives = 295/705 (41%), Gaps = 72/705 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E + + L L Y+ + D E+D L+ LE + E + P+SPT Sbjct: 3 EDKHKIMEALVLQLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGE-VLPNSPTNS 61 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 V A L + HE P LSL E + + + KLDGL + Sbjct: 62 VSADKLKG-QKEEHEYPALSLAKTKSETELAKWAE----------ERPIWLSWKLDGLTL 110 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 + Y+NG L TRG+G G +IT I I L + +RGE + A F Sbjct: 111 VVTYDNGKLTKVVTRGNGHIGTNITHLAAAIDNI---LPTVKANGHIVIRGEAVISYADF 167 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E+ N ++ +ANPRN A+GSL D R L + + + + E + Sbjct: 168 EQFNLESEEE----YANPRNLASGSLTLKDINEVKARHLRWIPFSLVHTD--EEIISWGD 221 Query: 242 RLLQFKKWGLPVSDRVTLC-ESAEEVLAFYHKV------EEDRPTLGFDIDGVVIKVNSL 294 R+ K G +R + +AE + + + +DG+VI + Sbjct: 222 RMAFLDKLGFNTVERELITLPTAENIEKVIATWTLRVTDTTRKDKQPYPVDGLVITYDDT 281 Query: 295 AQQEQLGFVARA-PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 R AFK+ + T + +E+ T I+PVA +PV + G V Sbjct: 282 EYAATGSVTGHHATRAGFAFKWQDESVETTLEYIEWSCA-TSTISPVAVFKPVELEGTTV 340 Query: 354 SNATLHNADEIERLGLR-IGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCG 412 A+L N E ERLG+ G K+++ +A +IP+V++V E PT CPVC Sbjct: 341 KRASLCNISECERLGIGDAGTKLMVIKANKIIPKVISV-----TECLGSFTIPTTCPVCH 395 Query: 413 SDVERVEGEA----VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 + VE EA CT C A++ + FVS+ +++DG+ ++ + + + +V Sbjct: 396 QPTQIVESEASGTRTLHCTNHH-CPAKQLKKFARFVSKEGINIDGLSEQTVQKFINLGWV 454 Query: 469 HTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAA 526 ADLF L A L +E G KS N++ A+EK+++ + L+AL I VG+ Sbjct: 455 SEYADLFHLQEKAEALKYMEGFGEKSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCT 514 Query: 527 GLAAYFGTLEALEAAS---------------------IEELQKVPDVGIVVASHVHNFFA 565 L + + LE L S E + +G ++ + Sbjct: 515 RLLSAYP-LEELINKSRENMVSPTLQRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQ 573 Query: 566 EESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQM-SRDDAKARLVEL 624 ++SN + LL E ++E + G T V+TG + +R++ KA + Sbjct: 574 DDSNYAQLQRLLQE----LTVSQTSSEPKGNLCQGLTFVITGDVHHYKNRNELKAYIESE 629 Query: 625 GAKVAGSVSKKTDLVIAGE--AAGSKLAKAQELGIEVIDEAEMLR 667 G KV GSVSK T +I + + K KA+EL I ++ E + + Sbjct: 630 GGKVTGSVSKSTHYLINNDVKSTSGKNKKAKELNIPILSEDDFMA 674 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 206/690 (29%), Positives = 326/690 (47%), Gaps = 68/690 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + ++ EL + + Y+ PEI DA +D L ELR L+ HP L S A Sbjct: 26 KARIEELAERIEKYRASYY-AGHPEISDAAFDALEDELRALDPAHPVLARVGS------A 78 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT--------------- 109 + + + + RHE+PM SL+ V E+ L + R + L + Sbjct: 79 SLITEWEKARHEIPMGSLNKVVSEDELLGWVARCDEILVKDGHGDGGTGAAPPAPGSISS 138 Query: 110 -----WCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENI 164 + E KLDG+++ ++Y+ G LV A TRGDG GE IT+NV ++ IP ++ Sbjct: 139 VAGDLFVAE-KLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIRE--- 194 Query: 165 PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFC 224 RL VRGE+ L + ++ +PRN AAG+ ++ D + + F+ Sbjct: 195 KGRLSVRGEIILRLSDMKRHF--------PGVTSPRNMAAGAAKRFDGQGAEHCTVLFY- 245 Query: 225 YGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVE-EDRPTLGFD 283 + T R ++ G S E+V+ Y + E R L ++ Sbjct: 246 ----DVADHLEIPTCRARFAWLRELGFATPQTAH--GSVEDVVKLYRRYSSELRAGLDYE 299 Query: 284 IDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARL 343 IDG+V+ V+SL Q LG V R PR AVAFKF + ++T V +++ G +G +TPVA + Sbjct: 300 IDGLVVYVDSLHVQGLLGDVNRRPRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVAIV 359 Query: 344 EPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVV 403 EPV +AG V A+LHN+ + LG+ +GD+V++ R DVIP V VV +R Sbjct: 360 EPVELAGANVRRASLHNSANVRSLGIGVGDEVLVSRRNDVIPYVEEVV-EKRGPVAVP-- 416 Query: 404 FPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLV 463 P+ CPVC + + C C A + + +++ A+ GDK+I+Q+V Sbjct: 417 -PSVCPVCSAPLVVE--GEYLLCRNA-ACRALIEGRIHNWI--DAIGALEWGDKLIEQVV 470 Query: 464 EKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEA 523 V P DL+KLT + L+R G KSA + L+ FL ALGI Sbjct: 471 AAGLVREPLDLYKLTVKSIADLDRRGEKSATKCLEQLKSRLPLALPVFLAALGIEGFAIQ 530 Query: 524 TAAGLAAY-FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 TA L + + T+E L AA +EL +P +G + A+ + S+ G Sbjct: 531 TARLLVSAGYTTIEKLLAAGEDELAGIPGLGAIKAASIVRGLRARSD--------EIGRL 582 Query: 583 WPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG 642 A IV A E + P AG T TG+ ++ R + + G +V SV+K+ + ++ Sbjct: 583 LAAGIVPVAPEAEGPLAGLTFCFTGAGAR-PRGELTHLVESSGGRVLNSVTKELNYLVIA 641 Query: 643 E--AAGSKLAKAQELGIEVIDEAEMLRLLG 670 + + SK KA++ G ++I E ++ +L+ Sbjct: 642 DVASTSSKAVKARKYGTKLITEDDLDKLIA 671 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 193/682 (28%), Positives = 316/682 (46%), Gaps = 58/682 (8%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 E+++ +L T++ H+ LY+ PEI DAE+D L EL+ L+ ++ T V Sbjct: 4 EKRILDLEKTIKKHQDLYYN-AQPEISDAEFDALWDELKALDPQNKLFFT-------VPL 55 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 F++ H +PM S + D SF A+ ++ + + K+DG ++ + Sbjct: 56 ESTEGFAKSEHIIPMGSQEKAADPPSFEAWALKM-------PFKEYIVQYKMDGASLELQ 108 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLE------VRGEVFLPQ 178 YE G V A TRGDG G+DIT NV ++ + + PA +R EV + + Sbjct: 109 YEEGHFVRAVTRGDGKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIMLR 168 Query: 179 AGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE------G 232 + +K +D AN RNAA G +++ + + L F Y G Sbjct: 169 SIHQKYFKDK--------ANCRNAANGLMKKKNGELCE--HLNLFAYDAVQGSIGRPFTG 218 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 T +L+ KK G + V C+S EV+ + V + RP+L +DIDG+VIK + Sbjct: 219 DAPFKTESEKLVWLKKAGFNCVE-VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIKND 277 Query: 293 SLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGA-ITPVARLEPVHVAGV 351 ++ ++ P +AFKF +E +T ++++E+ +GA TP+A +EPV +AG Sbjct: 278 TIDPEDMKRAR---PEKQIAFKFSLEEAVTVLKEIEWS--ESGATYTPIALIEPVRLAGT 332 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 V A+L N + I+ L L+IG +VV+ + G++IP++ L+E P + +E+ +P C VC Sbjct: 333 TVKRASLANPNIIKALNLKIGSRVVVTKRGEIIPKIEA--LAENPPNVKEIEYPDTCSVC 390 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 GS + C + C ++ ++S +D+ G +I +L E V++ Sbjct: 391 GSPLTNEGTR--LYCPN-MSCPKLIHHRIEKWIS--VLDIRDFGITLIKRLFEMGRVNSI 445 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAY 531 DL+ LT +L ++RMG SA+ V AL KE + F+ I +GE L Sbjct: 446 TDLYTLTVEELAAIDRMGKLSAEKVYKALHSKKEISLTEFIAGFDIEGIGETMVEKLEEA 505 Query: 532 -FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 F L L AS + V G V++ + + + + Sbjct: 506 GFNDLNELLGASEADFANVYQFGQVLSHTLVTNLSILKD----EMTGLIDKGYIKIKPPL 561 Query: 591 AEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSK 648 E + G + TG L+ M R A+A + E G V SV K ++ ++ SK Sbjct: 562 TSEEGAVLKGLSFCFTGELNTMKRAQAEALVKEKGGTVKSSVVKGLSYLVTNTPDSGSSK 621 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 KAQELG +I E L L+G Sbjct: 622 NKKAQELGTAIITEEAFLNLIG 643 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 220/688 (31%), Positives = 328/688 (47%), Gaps = 32/688 (4%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 + L +RH+ Y+Y+V+D IPD+ YD+L+ L+ LE +HPE +T DSPTQ VG Sbjct: 4 RHEYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGH 63 Query: 65 APLAA-FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVTWCCELKLDGLA 120 + F ++ PMLSLDN+F + + ++ + + K +E E K+DGL+ Sbjct: 64 PVYESHFELVKRVKPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKMDGLS 123 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 + + Y + A+TRGDGTTGED+T N + IP L + +RGEV + A Sbjct: 124 LDVNYTYDTMELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGG-VSIRGEVVVRLAD 182 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 + +IN D G K FANPRN AAGSLRQ DPRIT +R L F Y V G + T Sbjct: 183 YNQINADLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLG-DPEATWY 241 Query: 241 GRLLQFKKWGLPVSDRVTLCESAE-----EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295 K+ G +D + A + + +R + F++DG+V KV Sbjct: 242 DDQAWLKENGFYTADTGKRLSHDQRGMTSGFPALIAECQAERSSYPFEVDGIVFKVVKHT 301 Query: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 +E LG+ +R PRW A+KFPA + T + V+ QVGRTG +TP+AR+EP+HV G +SN Sbjct: 302 HRETLGYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTTISN 361 Query: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDV 415 T+HN E+E+ L G V I RAGDVIP + + + CP CG+ V Sbjct: 362 VTIHNLKELEQHKLFEGCYVEISRAGDVIPYLERRITDHN--GEKLYGEVEACPCCGTKV 419 Query: 416 E---------RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 EG C C ++ L + R +++ G+GD+++ L Sbjct: 420 VVVHGKKTKENPEGSRTEYCPNT-KCKDRQVAHLLYCTQRHVLNIKGLGDELVMDLYNAG 478 Query: 467 Y--VHTPADLFKLTAGKLTGLERMGPKSAQNVVNALE-KAKETTFARFLYALGIREVGEA 523 V P L L + + A+ + A+ + R + ALGI + Sbjct: 479 VVDVTRPLSLLMLKHEDFLKI-GQSERMAEKLAMAVTIASANLDLTRVITALGISGAADG 537 Query: 524 TAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHW 583 TA LA TLE + A+I+ + ++ D+G V A + FF E++ + V Sbjct: 538 TAERLAREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFFDEDNRKPHGQSAWRPYVGD 597 Query: 584 PAPIVINAEEIDSPFAGKTVVLTG-SLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAG 642 G T V+TG +R D + + GA V+ +V+K T V G Sbjct: 598 RYLKAPEPLGTLFRP-GTTFVVTGSKFGDKARKDLERWFKQNGATVSSTVTKSTTTVYCG 656 Query: 643 EAAGS-KLAKAQELGIE--VIDEAEMLR 667 + KLA A+ELGI + +E + Sbjct: 657 TKYTAHKLATAKELGIPYVIYNEDGITE 684 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 206/778 (26%), Positives = 327/778 (42%), Gaps = 132/778 (16%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 LR + + LY+ EI D EYD+L + L LE K + + T +VGA Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKFNQ----QTITNQVGAPISDYS 126 Query: 71 S----QIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---------KNNEKVTWCCELKLD 117 + + RH+ MLSL N + ++ +AF +++ L + +++ + ELK D Sbjct: 127 NNRGLKFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKYD 186 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARL--------- 168 G+ +S++YEN L TRG+G GEDIT+N IP + +P+ L Sbjct: 187 GIGISLVYENNKLKRVLTRGNGEIGEDITTNALQF--IPSLKNLLTLPSNLTVFILFLIL 244 Query: 169 -----EVRGEVFLPQAGFEKINE-DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPL-- 220 E+RGEV L ++ + IN+ + N RN +G LR A L Sbjct: 245 KYKDFEIRGEVVLNKSYLKIINKLKLDNNDQHQYKNTRNIVSGILR-KSIEEDANDSLNI 303 Query: 221 ------------TFFCYGVGVLE---------------------------GGELPDTHLG 241 FF Y E +T Sbjct: 304 EPILLLNEQMKFDFFPYFFIPTNNNNNNINNGENENENDNEKENDNEMIIDDERCNTQSK 363 Query: 242 RLLQFKKWGLPVSDRVTLC-----------ESAEEVLAFYHKVE-EDRPTLGFDIDGVVI 289 L F+K G + + + + F + E + R +DIDG+VI Sbjct: 364 NLKLFEKMGFQIDNGSNTVVTLSTGGGGNNNDIKNIEEFIKEWELKKRENHNWDIDGIVI 423 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 KVN + Q LG + R+PRWA A+KF A+ +++ ++D+ QVG++G ITPVA +EP+ V Sbjct: 424 KVNDINIQRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVEPIQVH 483 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTH-- 407 GV +S ATL+N I +L ++IG KV+I RAGDVIP+++ + Sbjct: 484 GVTISRATLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNTNNTNN 543 Query: 408 --------------CPVCG--SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDV 451 CP C S++ G C C Q + + FV ++AM++ Sbjct: 544 IESLFKCNENGNILCP-CNLKSELVNRVGYVDYFCV-AENCPNQLVQQISWFVDKKAMNI 601 Query: 452 DGMGDKIIDQLVEKEYVHTPADLFKL--TAGKLTGLERMGPKSAQNVVNALEKAKETTFA 509 G+G I L+E + + DL++L KL L+ N++ ++E +K A Sbjct: 602 QGVGKSQIQVLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSRGLA 661 Query: 510 RFLYALGIREVGEATAAGLAAYFGTLEALEAA-SIEELQKVPDVGIVVASHVHNFFAEES 568 L A+GI +G + + L+ F +L+ L + SIE ++ +G + + NFF Sbjct: 662 SLLCAIGIPGIGSSNSKILSEKFQSLDNLINSPSIESIELQSGLGRQTSESIFNFFNPLD 721 Query: 569 NRNVIS-------------------ELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSL 609 N E +S + K +V+TG Sbjct: 722 QFEKQYLDYLIFKFKSNNLKLTHNNNNDNNEEIGNNNNNNNNENNNSFLSNKYIVITGKF 781 Query: 610 SQMSRDDAKARLVE-LGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEM 665 RD K + AKV S++ T +++ GE +KL KA ELGI++ E E+ Sbjct: 782 KLGDRDFVKDFIQRKFNAKVQSSINSFTQILLIGEKPAIAKLNKANELGIQIKSENEL 839 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 239/765 (31%), Positives = 348/765 (45%), Gaps = 119/765 (15%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPE-----IPDAEYDRLMRELRELETKHPE------L 52 I ++L L + LR H+ LY+ + IP D +R + + E Sbjct: 102 IYEELVRLASDLRRHDALYYESEMARNSVGRIPPCSNDSNVRVAWAYKPRGTEDASETFF 161 Query: 53 ITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---KNNEKVT 109 P PT + + H PMLSLDNV EE LA+ +R++ +L +T Sbjct: 162 CRPRRPTPNDATRIVVDRVKRPHVRPMLSLDNVHREEELLAWLERIRKKLTVDDGPSSLT 221 Query: 110 WCCELKLDGLAVSILYENGV-------LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGE 162 E KLDGL++S YE V A+TRGDG G+D+T V+ +PL L Sbjct: 222 ILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTLDWA 281 Query: 163 NI---------PARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDP- 212 ++ P LE+RGE+ LP F+ + G FAN RNAA+G L + + Sbjct: 282 SLVADPESYTHPKVLEIRGEIVLPTTVFQSL-----EGEGLAFANARNAASGILLRKESI 336 Query: 213 -----RITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTL-------- 259 + L F+ Y V +G + L R+ G V + V + Sbjct: 337 TDPVASQALREKLCFYAYDVAGDDGFTVSGVQLRRV--LPTLGFRVPEPVAVTRLRLNNT 394 Query: 260 ----CESAEEVLAFYHKVEEDRPTL-------GFDIDGVVIKVNSLAQQEQLGFVARAPR 308 + +L ++H ++ R +D+DG V KV+ + LG RAPR Sbjct: 395 TAWNVNDIQALLKYHHSMQHHRQGKKTSQTYGDYDMDGAVHKVSESDLRIILGQSNRAPR 454 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER-L 367 WA+A KF +T + D+ QVGRTGA+TPVA L+PV +AGV+V ATLHN +++ L Sbjct: 455 WAIAHKFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQVL 514 Query: 368 G----LRIGDKVVIRRAGDVIPQVVNVVL-----SERPEDTREVVFPTHCPVCGSDVERV 418 G + V++RRAGDVIPQVV + S DT V FP CP CGS V Sbjct: 515 GSTTTIAKESSVLVRRAGDVIPQVVQRIAGTDAGSNNGFDTISVAFPETCPACGSPVVTD 574 Query: 419 E---------GEAVARCTGG-LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 E V RC G C + S+ H VSR A+DV G+ + I QL+E ++ Sbjct: 575 EVNKTASKETAGQVLRCGGPQWNCTPRAVGSIAHAVSRDALDVTGLSEARIMQLIEAGFI 634 Query: 469 HTPADLFKLTA-----GKLTGLERMGPKSAQNV--VNALEKAKETTFARFLYALGIREVG 521 P+D+F L KL ++ GPKSAQN+ V + +RF+Y+LGIR G Sbjct: 635 SRPSDIFALAKSPTQLEKLAEMDGWGPKSAQNLAAVANRIAKNGISLSRFVYSLGIRFSG 694 Query: 522 EATAAGLAAYFGTLEALEA----ASIEELQKV-----------------------PDVGI 554 ++A +AA +G++E AS +++V +G Sbjct: 695 VHSSALIAAAYGSVEDFLKDVEAASTLPIKQVQDQESNDEQVQSFARLREETDITKGIGP 754 Query: 555 VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAE--EIDSPFAGKTVVLTGSLSQM 612 V+ + + F ++ L + + + P VV TGS+S+M Sbjct: 755 VLLNSLDTFAQDQELVEAAESLASSILVLADDSAMVVSTLATTGPLQDMAVVFTGSISEM 814 Query: 613 SRDDAKARLVELGAKVA-GSVSKKTDLVIAGEAAGSKLAKAQELG 656 SR +AK +GAK GS+SK T LV+AGE G KL +A++LG Sbjct: 815 SRSEAKKWAKVMGAKSTPGSISKLTGLVVAGEKGGKKLEQAEKLG 859 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 191/663 (28%), Positives = 289/663 (43%), Gaps = 70/663 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 EL + +H Y PEIPDA YD L+R L++LE H EL+T RV A +A Sbjct: 14 DELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDH-ELVT------RVYAPAVA 66 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 128 ++RH PMLSLD + E L + K+ +E E K DG++ + +G Sbjct: 67 GSGKVRHLRPMLSLDKAYSLEEVLEWAKKFAR----SEDEELLVEPKYDGISANF---DG 119 Query: 129 VLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDA 188 + +TRGDG GE+IT + + L+ G VRGE+ + F+ + Sbjct: 120 RV--LSTRGDGELGENITDKL---PLVELETAGHTGKVDRPVRGELVIRDDDFKTLYSHI 174 Query: 189 RRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKK 248 R+ GG V+ N RNA AG + + + ++ Sbjct: 175 RKKGGGVYKNSRNAVAGIMGLKEIAEMELQGAKITLVDYNLVS----------------- 217 Query: 249 WGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPR 308 V E+ A + ++ L + DG+VIK+ A LG A PR Sbjct: 218 --FRV--------KYSELAAKWEELRRQLEALPYPQDGIVIKLADSAYSASLGNTAHHPR 267 Query: 309 WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLG 368 +AFKF + T + VE+ G+ +TPVA LEPV ++G + ATLHN I LG Sbjct: 268 GEIAFKFTNIRRETRLIGVEWSFGK-NCLTPVAELEPVEISGTTIRRATLHNIQNILELG 326 Query: 369 LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTG 428 ++IGD V + RAGDVIP +V S P + R CP CG+ + R E C Sbjct: 327 VQIGDTVTVERAGDVIPYIV----SSTPGEERRSPLIEDCPSCGAKLVRRGPE--LCCPN 380 Query: 429 GLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERM 488 C + + L + R + ++ +G+ + +L+E V DLF+LTA L L+ Sbjct: 381 PE-CPETQLQRLA--AAVRNLGIERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGF 437 Query: 489 GPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQK 548 KSA N++ ++KA+ + L AL I +G A + ++ L S EEL Sbjct: 438 AAKSAANLIEEIQKARIVNDYQLLAALNIPNIGANVAKVIFSH-TDFAGLRRMSEEELSA 496 Query: 549 VPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGS 608 +P +G A + + A +S +H AP TV TG Sbjct: 497 IPGIGPERAKALVSELAAQSEYLDELLGAVRLIHAAAPAAEIP----------TVCFTGK 546 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA--GSKLAKAQELGIEVIDEAEML 666 + + R + G + A V+ L++A + A KL KA LG++V+ E L Sbjct: 547 MPE-KRSYYEKLATAHGYRSADDVTSSLSLLVAADPAENSGKLKKAARLGVKVVSLDEFL 605 Query: 667 RLL 669 +L Sbjct: 606 SML 608 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 192/687 (27%), Positives = 307/687 (44%), Gaps = 63/687 (9%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M + ++++ EL + HH+ Y+ +I D +D L EL L+ +P L S +Q Sbjct: 1 MSTAQRRVQELEKLILHHQDRYYN-AESDISDDAFDALWEELARLDPGNPLLKAIGSDSQ 59 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 R + RH VPM S DEESF A+ K+ N + + KLDG++ Sbjct: 60 R-------DAVKKRHIVPMGSQHKAADEESFSAWAKK-------NALQAFLVQHKLDGVS 105 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL-----HGENIPARLEVRGEVF 175 + + YE G A TRG+G G+D+T+NVR +R L N+P VRGEV Sbjct: 106 LELQYERGHFCCALTRGNGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVI 165 Query: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGV------ 229 + + AN RN G L++ D R + L CY Sbjct: 166 MHKDIHRSHY--------PTHANCRNTVNGILKRKDGR--GRTHLHIVCYDAVPGTPGKP 215 Query: 230 LEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVI 289 G +L + G C +A+EV+A ++ R L + IDG+V+ Sbjct: 216 FTGSLPFADETEKLAWLARQGFVTV-HSHRCANAQEVVALRSEIMRTRELLPYSIDGLVV 274 Query: 290 KVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGA-ITPVARLEPVHV 348 K L Q+ P+ +AFKF QE +T +RDV++Q +G TP+ +PV + Sbjct: 275 KSTDLDFQD---AQLPRPKKQIAFKFSTQEAITTLRDVQWQT--SGVTYTPIGITDPVRL 329 Query: 349 AGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHC 408 AG V A L N + + +L L+IG V+I + G++IP++ +V + P +E+ PT C Sbjct: 330 AGTTVKRANLCNPNMLTKLCLKIGSHVLISKRGEIIPKIEALVST--PAHAQEIHIPTQC 387 Query: 409 PVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYV 468 C + +E C + C + ++ +++ +G ++I +L E++ V Sbjct: 388 TSCNTVLENSGSR--LFCPN-VNCPLLSHHRITRWI--ECLEIKHVGTELIQRLFEEKKV 442 Query: 469 HTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGL 528 DL+ LT L +E +G +A+ ++ A+ KE F+ GI +GE L Sbjct: 443 RRIPDLYTLTCEDLIEIEHVGNATAKKILEAIHHKKEIALQTFIAGFGIEGIGETMGEKL 502 Query: 529 AAY-FGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPI 587 F TLE + A+ E L+ + G +A V A ++ + ELL G Sbjct: 503 ICAGFDTLEKVLHATTETLESIYQFGTELAKSVVTGIA--RVKDDMCELLDRGFV----R 556 Query: 588 VINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGE---- 643 ++ ++ +SP GK+ +GSL R R+ LG V SV++ +I Sbjct: 557 ILAKQQAESPLRGKSFCFSGSLRNGDRATI-HRIRALGGVVRTSVTRDLSYLIFESLSQP 615 Query: 644 -AAGSKLAKAQELGIEVIDEAEMLRLL 669 KL K Q + +E+I E E RLL Sbjct: 616 YRTAQKLKKEQGVALEIISEDEFCRLL 642 Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 72/218 (33%), Gaps = 24/218 (11%) Query: 473 DLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLY--ALGIREVGEATAAGLAA 530 DL L L+ R K + ALE E F R L + GE Sbjct: 603 DLSYLIFESLSQPYRTAQKLKKEQGVALEIISEDEFCRLLDQASASCTHTGETVHPLQGK 662 Query: 531 YF---GTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL---------- 577 F G ++ +E KV +G VAS V + + Sbjct: 663 SFYFSGASRSMNHKHAQE--KVRALGGDVASSVTAQLDYLVFYSQSTRYRTACALGIQII 720 Query: 578 -----AEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSV 632 + + + + +P G + +G L M+R A A + LG V +V Sbjct: 721 SEETLHKLIATAQSPLHTDAHVHAPLHGMSFCFSGDLDGMTRAQAIALVQRLGGTVKTAV 780 Query: 633 SKKTDLVIAGEAAG--SKLAKAQELGIEVIDEAEMLRL 668 S + +++ + G K A G+ +I E L L Sbjct: 781 STQLTYLVSNDPHGQSRKCQNAVRCGVRIISEHVFLAL 818 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 187/682 (27%), Positives = 305/682 (44%), Gaps = 77/682 (11%) Query: 1 MESIEQQLTE------LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT 54 M+ + + + L L + Y P I DA YD L+ LRE+ H L Sbjct: 1 MQDLPSSIADISDPELLGQWLEKYNEAY-RAGKPMISDAHYDLLVERLREIAPDHGFLSA 59 Query: 55 PDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE--KVTWCC 112 V A A ++RH PMLS + +D++S F +RV V + Sbjct: 60 -------VEAETFADKREVRHPAPMLSTEKAYDKQSLERFVERVYKEAAQIGVTDVLFQV 112 Query: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 KLDGLA ++G + ATRG+G G DIT N IP G + G Sbjct: 113 TPKLDGLAAR---DDGQI--LATRGNGYAGYDIT-NALEKGVIPQGGRGLGL-------G 159 Query: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEG 232 E+ Q+ F++ D F +PRN G + I+AK+ L Sbjct: 160 EIVAVQSYFQENLADR-------FEHPRNMVVGIISSDVLNISAKQAL------------ 200 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDR-PTLGFDIDGVVIKV 291 E H KW S +E+L K+ +D + +DG+V V Sbjct: 201 -EDKQVHFVPYATLNKW----------EGSGKELLENSEKITQDLIQATDYPMDGMVASV 249 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + ++ +G + RW +A K + +T V + +QVGRTG +TPV +EP+ ++G Sbjct: 250 MNQDVRDHMGATSHHYRWQIAIKAKGETGVTTVNAITWQVGRTGNVTPVLEVEPLKLSGA 309 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 + T HNA I G +G + + R+G+VIP++ NV+ + + + P +CPVC Sbjct: 310 TIRRVTAHNAGRIREKGAGVGASIEVIRSGEVIPKLENVL-----TPSDDTLIPENCPVC 364 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + +E +C L C A+ ++ ++H+ R + D G K +++LV + + Sbjct: 365 ETPLEWNND--FLKCPN-LNCKARVEQRIRHWF-RILGNADWFGIKTVERLVAGGF-DSL 419 Query: 472 ADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLA 529 ++ +T LE GP ++N+ A+ +K RFL A GI ++GE + + Sbjct: 420 EKIYAMTEEDFLSLE-FGPVQSKNLAEAINLSKSRPVEDWRFLAAFGISDLGEGDSRKIL 478 Query: 530 AYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVI 589 ++F LE L + +++ + G V + + ++ I +L G + + Sbjct: 479 SFFP-LEELLDKTRDDIVALHGFGDVTSISIEK--GLKALGPTIRHMLDLGFNLQPTPLK 535 Query: 590 NAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SK 648 + ++ SP +GK VV TGS+ SR D + LGA V +V+ KTD +I G G K Sbjct: 536 SEMDVSSPISGKGVVFTGSMETGSRKDMEENARSLGANVQKAVTGKTDYLICGAKVGAKK 595 Query: 649 LAKAQELGIEVIDEAEMLRLLG 670 KAQ+LG+ V+ E E L+L+ Sbjct: 596 TQKAQDLGVTVLTEQEYLQLVE 617 >UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN Length = 649 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 166/659 (25%), Positives = 279/659 (42%), Gaps = 67/659 (10%) Query: 20 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPM 79 ++ I D+ YD + E HP L+T V LA + M Sbjct: 50 NAFYRSAEQIINDSTYDAFLSEFSTYNPDHPYLLT-------VEPEVLADSKTVPLPKKM 102 Query: 80 LSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 LS D + E + R+ + ++ KLDG A Y++G +S T Sbjct: 103 LSTDKAYSFEEIKKWIDRLLKAAIEVGVSESEIQIKVTPKLDGYAA---YDDG--ISLYT 157 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RGDG G+DIT RA L N R GE+ + ++ F+ + D Sbjct: 158 RGDGARGQDIT------RAFNKGLQVANNGDRGLGPGEIVIKKSYFDTVLSDK------- 204 Query: 196 FANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSD 255 F N RN A + + + ++ + L + W + Sbjct: 205 FENSRNIQAAIIAEKKVDESIQKAIDVGACVFFP-------------FLSLENW---IGH 248 Query: 256 RVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKF 315 + E ++ + + +DIDGVV++V + +E +G RW +AFK Sbjct: 249 YTEILVDFESIVE------KMWSAVDYDIDGVVLEVTNETLKEHMGATRHHHRWQIAFKV 302 Query: 316 PAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKV 375 A+ V +V Q RTG +TPVA LEP ++G +S AT+H+ + ++ G+ G V Sbjct: 303 NAESAEVKVLNVTPQTSRTGRVTPVAELEPTKLSGATISRATVHHYNMVKTNGVGPGAIV 362 Query: 376 VIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQ 435 + R+G VIP++ V+ E CP CG+ + C C AQ Sbjct: 363 QLVRSGLVIPKIEKVIK------AVEPQLAKECPSCGTHLIWESDH--LVCPNKTDCPAQ 414 Query: 436 RKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQN 495 + +L HF + DG G K+I++L E + ++++L G K+AQN Sbjct: 415 TENTLVHFFKTLGNN-DGFGPKVIEKLHEFG-IKKIHEIYELKQESFVSF-GFGDKTAQN 471 Query: 496 VVNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVG 553 +V L+ +++ RFL A G+ + L + +L++L A++E+L ++ Sbjct: 472 LVEQLQVSRDVEIEDWRFLAAFGVSRLAGGNCEKLLQH-HSLDSLFEATVEDLVQLDGFA 530 Query: 554 IVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMS 613 V A + A + P ++P GK +V TG+++Q S Sbjct: 531 QVSADAIVEGLANIKE-EFLKLSALNFNLTITPKASEKSPGETPVFGKIIVFTGAMTQGS 589 Query: 614 RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVIDEAEMLRLLGS 671 R D + + LGAKVA SV+ KT L++ G+ G +K+ A++ G++V+ E + L L+ + Sbjct: 590 RGDMEKQAKALGAKVAKSVTGKTSLLVTGDKVGANKINAARDKGVQVLSELDYLALIST 648 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 181/669 (27%), Positives = 276/669 (41%), Gaps = 70/669 (10%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 L L Y AP + DAEYD L+ LR + HP L Q V P Sbjct: 2 SLVHKLEEANAAY-RAGAPIMSDAEYDALVERLRREQPDHPYL-------QTVEPEPENI 53 Query: 70 FS--QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLAVSILY 125 F ++RH PMLS + + E + + V + ++V + KLDGLA S Sbjct: 54 FGGAKVRHHAPMLSTEKAYTESDLIRYFSAVTRQAARLGMDEVIYAMTAKLDGLAGSRDR 113 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 +G V ATRG+G GEDI LK+ G ++ GE+ +P+ FE Sbjct: 114 AHG--VDLATRGNGLQGEDIGKAFARG----LKIVGADVDGP----GEIVMPKDFFE--- 160 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E G F +PRN + VG + D H Sbjct: 161 EHLVPLG---FKHPRN-----------------------FMVGFVGADTEKDHHRLVKES 194 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKV-EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 +P ++ + +L + E+ R +D DG+VI+V + LG Sbjct: 195 GMAHFVPYANLPRFYADKDTILRDIAYISEDIRKNTPYDTDGIVIEVEEPELRAALGSTN 254 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 RW +A+K + T V V +Q GRTG ITPV ++PV ++G + AT HN + Sbjct: 255 HHHRWQIAYKTKGETAETTVTGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKA 314 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + GL +G +V + R+G+VIP +++V+ + PT CP C V E Sbjct: 315 RKDGLGVGSRVTMIRSGEVIPFIMDVL------SPAPLDVPTACPCCNGPV--EEDGEYL 366 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C C AQ + ++ HF DG G K ++++V + + +T G Sbjct: 367 TCVNPH-CEAQAEGAISHFFKIMGT-ADGFGPKAVEKIVAAG-ITDILAVLDMTRADFEG 423 Query: 485 LERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + GP A+N+ +++ T RFL A GIR +G + L G L+AL + Sbjct: 424 M-GFGPGQAENLEREMKRCMSTPVEDWRFLAAFGIRYLGRGDSKALLCAIGGLDALNGIT 482 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 ++ + A + + I + + P AG + Sbjct: 483 PAQIMAIDGFAEKTALCIAHDLTWRWM--EIEAVRDRMEAPLVSSAPAGDIGTLPLAGMS 540 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVID 661 +V TG+ S+ R+ + + LGAKV V+ KT +++ GE G SK KA LG V Sbjct: 541 LVFTGTFSK-DREVMETQAEALGAKVQSGVNGKTSVLVIGEKPGASKTTKAAALGTPVWT 599 Query: 662 EAEMLRLLG 670 EAE L +G Sbjct: 600 EAEYLLRIG 608 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 167/668 (25%), Positives = 266/668 (39%), Gaps = 68/668 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 EL L+ LY P I D YD + HP + + V L Sbjct: 41 DELLALLKVTNALY-RSGFPVIEDILYDSFWNKFALNHPNHPFITS-------VETEVLN 92 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE----KVTWCCELKLDGLAVSIL 124 + MLS D + +E + R+ + + ++ KLDG A Sbjct: 93 LGKTVALPQKMLSTDKAYSKEEIKKWLDRILKAAEELDIDTNEIEIRITPKLDGYAA--- 149 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 +++G TRGDG G+D++ RA L R GE+ + +A FEK Sbjct: 150 FDDGE--RLYTRGDGVKGQDVS------RAFERGLKVVRNSERGLGAGEIVINKAYFEKK 201 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 F N RN A + + + +R L G V Sbjct: 202 LSQ-------YFENSRNIQAAIIAEKN---VDERVLEAIKEGACV----------FHPFA 241 Query: 245 QFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 W + L + + +E+ ++ +D+DGV+++ +E +G Sbjct: 242 VLPNW---TGNYQDLMTDFDGI------IEQVWNSVEYDVDGVILEATDTRIKEHMGANR 292 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 + RW +AFK + V V Q RTG +TPVA L P ++G ++S T+H+ + + Sbjct: 293 KFHRWQIAFKINDEVAEVEVISVTPQTSRTGRVTPVAELVPTRISGAMISRVTVHHYNMV 352 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 + G+ G V I R+G VIP++ V+ P P CP C S + Sbjct: 353 KINGVGPGAIVQIVRSGLVIPKIEKVIKPVDP------QMPELCPSCKSHLLWESDH--L 404 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 C C AQ + +L HF A + DG G K I++L V ++ L + Sbjct: 405 VCPNKSDCPAQTENTLVHFFKTLANN-DGFGPKNIEKLANLG-VKHIHQMYDLKPHQFA- 461 Query: 485 LERMGPKSAQNVVNALEKAKETTF--ARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + G K+++N+ + L+ +K RFL A G+ +G L ++ +L L A+ Sbjct: 462 MYGFGEKTSKNLYDQLQASKNIEIEDWRFLSAFGVSRLGGGNCEKLLQHY-SLRELFEAT 520 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKT 602 +E++ ++ V A + A P E + SP GK Sbjct: 521 VEDIAELNGFARVSAEAIVKGLANIKE-EFFKVYDLGFNLSITPKQSELESLASPLTGKI 579 Query: 603 VVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEVID 661 VV TG + Q R D + LGAKV SV+ T +IAG G +K+ A+E G++V+ Sbjct: 580 VVFTGKMLQGKRSDMEKHAKALGAKVGTSVTSNTTYLIAGLKVGETKINDAKEKGVKVLS 639 Query: 662 EAEMLRLL 669 E E L L+ Sbjct: 640 EQEYLDLI 647 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 192/675 (28%), Positives = 295/675 (43%), Gaps = 66/675 (9%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR---V 62 +++ L L +H +LY V + EI D YD L +EL EL ++PE+ R + Sbjct: 8 ERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDFYNRPVPI 67 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 +R E PMLSL E F LK + + E KLDGLA+ Sbjct: 68 HEPSGETIQPVRFEEPMLSLKKALSVEEADTFL------LKFPDGTNFFYEEKLDGLALE 121 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNV---------RTIRAIPLKLHGENIPARLEVRGE 173 ++YE G LVS +TRG G GED+T ++ RT+R +P + + RL +RGE Sbjct: 122 LVYEQGQLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQG--DRLVIRGE 179 Query: 174 VFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQL--DPRITAKRPLTFFCYGVGVLE 231 ++ F+ +NE + +NPRNA +G +R L + R + L F Y Sbjct: 180 GYISLERFDSLNETGGKR-----SNPRNAVSGWVRSLPQNQREDIRGTLYFAAY---YAS 231 Query: 232 GGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKV 291 + G V + + E R + +DG+VIKV Sbjct: 232 DRLGTKAYSELRQVLLGLGFGVPES----------RDWIAVSENRRGNIR-PVDGIVIKV 280 Query: 292 NSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGV 351 + +Q+ G ++ P WA+A+KFPA+E + V + R G + PV + PV + GV Sbjct: 281 DKFKEQDASGNGSKFPHWAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVTIQGV 340 Query: 352 LVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVC 411 + +A+L N LGL IGD++VI R DVIP++ V E + + PT CP C Sbjct: 341 ICQSASLDNYGSFMDLGLSIGDRIVITRNNDVIPRLNRV---EECGEGDLLEAPTSCPSC 397 Query: 412 GSDVERVEGE--AVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 S +E V G + C C AQ + +DVDG+G + +LVEK +V Sbjct: 398 DSLLEVVVGRDSSELVCNNVAECPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEKGWVK 457 Query: 470 TPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLA 529 PAD+ L G + + P + + + L++ RFL ALGI ++G A LA Sbjct: 458 QPADILTLPEG--IKDQCLTPTTRRGLERVLQE--PVPLHRFLKALGIPDIGITLAKRLA 513 Query: 530 AYFGT---LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAP 586 E+L LQ V V + +A V N F ++ L Sbjct: 514 NAIPEGKIEESLTNPKF--LQSVRGVSVGIAYRVVNAFDSPVFKDNFHALKGLLTL---- 567 Query: 587 IVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG 646 + + V +TG++ SR + + G +++ +++ VI G+ G Sbjct: 568 -----QYTGTQDDCIKVCITGNI-GPSRGELCNLFAKEGIELSDRLTQDCAFVIVGDRPG 621 Query: 647 -SKLAKAQELGIEVI 660 SKL A E GI ++ Sbjct: 622 KSKLLIATESGIPML 636 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 234/572 (40%), Gaps = 55/572 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH-PELITPDSPTQ 60 +++ LR L + +Y+ I D YD+L +L + P Q Sbjct: 33 TRASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCFQP---------Q 83 Query: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA 120 V A L + H V L + D + + VQ + K+DG+A Sbjct: 84 NVIPARLPDNGKQPHPVAHTGLKKLSDRVQLVQWI--VQRE-------DLWVQPKVDGVA 134 Query: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180 V+++Y++G LVSA +RG+G GED T R I IP L G P+ ++GE+FL Sbjct: 135 VTLVYQHGKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGA--PSSFVLQGELFLKMTD 192 Query: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240 + GG N R+ AG +R+ P + G+ V E + P Sbjct: 193 HRQY-----AQGG---VNARSIVAGEMRRHQPSPVLSQ------IGLFVWEWPDGPKAMP 238 Query: 241 GRLLQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQ 299 RL + K+ G +D ES +V + L F DGVVI+ Q Sbjct: 239 ERLDKLKEMGFAMTADYTHAIESFADVEKWRDHWYH--SPLPFVTDGVVIRQTKEPQGRY 296 Query: 300 LGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLH 359 + + WA+A+K+P Q+ V DV F VGRTG + V ++ P+ + VS + Sbjct: 297 --WRNTSADWAIAWKYPPVHQVAEVVDVAFSVGRTGKVAVVLKISPLKLDDKSVSRVNVG 354 Query: 360 NADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVE 419 + ++ + GD+V + AG IP++ NVV R + +V P Sbjct: 355 SLSRWKQWDVLPGDRVSVSLAGQGIPRLDNVVW--RGTERPVIVSPDEHNF--------- 403 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 A + ++C Q L +++ GM D + +L++ + + LT Sbjct: 404 -HAFSCFRYSVVCQQQFLARLVWLSGEHGLNLAGMRDGMWLRLMQHDLLGDVLSWLYLTE 462 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 +L + MG K A+++ +L+ A++ + + +L ALGI +A A AL+ Sbjct: 463 AQLNAVNGMGDKRARDIYMSLQSARQKSLSHWLLALGIP---VPRSAISALNNVNWLALQ 519 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRN 571 + ++ ++ +G A + F Sbjct: 520 QRTAQQWRQFSGIGERRAEEIMAFLNHPIVME 551 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 190/678 (28%), Positives = 291/678 (42%), Gaps = 83/678 (12%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLM-RELRELETKHPELITPDSPTQRVGAAP 66 + EL T Y P +PDA YD L L E + +HP L + Sbjct: 30 VDELATACERLNASY-RAGQPLVPDAVYDHLFIATLSEKDPEHPFLKAVEP-----EGEA 83 Query: 67 LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN----NEKVTWCCELKLDGLAVS 122 ++H+ PMLS D + E+ F RV+ + +E +T+ KLDG+A Sbjct: 84 FEG-DTVKHDTPMLSTDKAYTEDELRRFLGRVEVAAEALGIRSETLTFRMTPKLDGIA-G 141 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + +G LV TRG+G G DI+ P G P GE+ L + F+ Sbjct: 142 MQRPDGRLV---TRGNGFAGADISHAFERGLRTP---DGSMEPGP----GELVLEEMFFQ 191 Query: 183 KINEDARRTGGKVFANPRNAAAG-----SLRQLDPRITAKRPLTFFCYGVGVLEGGELPD 237 E G +PRN AG +++ + + + FF Y Sbjct: 192 D--EIRVAFGMP---HPRNFVAGFVGADTVKPHHQKAADAQAIIFFPY------------ 234 Query: 238 THLGRLLQFKKWGLPVSDRVTLCESAEEVLA-FYHKVEEDRPTLGFDIDGVVIKVNSLAQ 296 Q W SA V+A + ++E R + + DGVV++V Sbjct: 235 ------RQLPAW----------QASAAVVMASWQERMEALRQAVPYRTDGVVLEVTDETV 278 Query: 297 QEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNA 356 + +G + RW VA K + VRD+ Q GRTG ITPV +PV + G +SN Sbjct: 279 KAHMGSTSHHHRWRVALKTKGEVAHVRVRDIRIQTGRTGRITPVLEFDPVLLTGARISNV 338 Query: 357 TLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVE 416 T H A + + GL +G ++ I RAGDVIP++ V+ E E + THCP CG + E Sbjct: 339 TAHTAANLAQQGLGVGAEIEISRAGDVIPKLERVL-----EPASEPMTVTHCPSCGHEAE 393 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 AV C + C AQ + L+HF + D G K ++ LVE + LF Sbjct: 394 VEGEYAV--CPNTVGCLAQAEARLRHFFHVMG-NADLFGPKTVEVLVENGH-TDLRGLFD 449 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKE--TTFARFLYALGIREVGEATAAGLAAYFGT 534 L A + GP A N+V L + RFL ALG+R +G + L A + Sbjct: 450 LNAVAFVSM-GFGPGQASNLVRELARCLREAVPDWRFLAALGLRHLGRGDSRKLLAVYP- 507 Query: 535 LEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEI 594 LE++ + E++ V G + ++ + E+ R L + P+ Sbjct: 508 LESITNLTAEDIAAVEGFGPITSASIAEQLQEQRERIEAMIRLGFNLE-RTPLAGEGAAA 566 Query: 595 DSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQE 654 + P AG+++V TG+L+ SR + + + LGA + V+ KT +++ GE AGSK KA+ Sbjct: 567 EGPLAGQSIVFTGTLTLGSRGELEEQARGLGATIQSGVNSKTTILVCGEKAGSKRKKAEA 626 Query: 655 LG-------IEVIDEAEM 665 + + ++DEA Sbjct: 627 INEKAGKEQVRILDEAAW 644 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 133/569 (23%), Positives = 232/569 (40%), Gaps = 58/569 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E ++ ++T L+ L + Y+ I D YD L ++L+ L + P+ Sbjct: 33 ERLQLEITALKNQLERWDVAYYQQGDSLIEDQVYDSLRQKLQLWHRC-AGLERVEEPSSL 91 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 + A + H V L + D + + + + + K+DG+A+ Sbjct: 92 LPA------GKTPHPVAHTGLHKLADPAAVDQWLR---------GRSDVWVQPKVDGVAI 136 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RG+G GE+ VR I AIP ++ PA L ++GE+FL Sbjct: 137 TLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIPA--AVKDAPATLILQGELFL----- 189 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 +N ++ G + N R+ AG+L + ++ G+ V + P Sbjct: 190 -MVNGHQQKIHGGI--NARSTVAGALMKNRLSPVLQQ------IGLFVWAWPDGPKEMTQ 240 Query: 242 RLLQFKKWGLPVS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL Q G P++ S ++V + + R L F DGVVI Q Sbjct: 241 RLQQLAAMGFPLALAYSQPVSSLDDVRQWRERWY--REALPFVTDGVVIHQARSPQGRY- 297 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A+ WAVA+K+P +Q+ V DVEF VGRTG I V +L+P+ + VS L + Sbjct: 298 -WQAKPGDWAVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNLGS 356 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERV 418 + + GD+V I G+ IP++ V ER E + H C + + Sbjct: 357 LPRWRQWAVVPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLP-- 414 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 C Q L + + + G+ + L+++ V D LT Sbjct: 415 ------------ECRQQFLARLVWLGGPQGLGLHGVSESTWQVLIDQGLVRHLLDWLVLT 462 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 +L +G K +++ + A++ FAR+L ALG+ + + + Sbjct: 463 PEQLMSAPGIGDKRGRSIHRQFQLARQQPFARWLIALGVPL-----SLQQTQALKSWHQI 517 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEE 567 + E +K+ +G A + F Sbjct: 518 RQLPVGEWRKMTGIGAKKAEQITGFLQHP 546 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 134/571 (23%), Positives = 238/571 (41%), Gaps = 55/571 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH-PELITPDSPTQRVG 63 ++++ LR L + +Y+ + D YD+L +L + P Q V Sbjct: 35 KKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQLREQLNQWLGCFQP---------QSVA 85 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 + L + H V L + D E + + + + + K+DG+AV++ Sbjct: 86 SVRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQRE---------DVWIQPKIDGVAVTL 136 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y++G L SA +RG+G GED T VR I IP L N+P+ L ++GE+FL Sbjct: 137 VYQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLLT--NVPSLLVLQGELFLKMTDH-- 192 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 GG N R+ AG +R+ P + G+ + E + P T RL Sbjct: 193 ---RQHIQGG---VNARSVVAGEMRRHQPSPVLSQ------IGLFIWEWPDGPKTMPERL 240 Query: 244 LQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + G +D S + ++H L F DGVV++ Q + Sbjct: 241 EKLTEMGFAMTADYTHAIGSFADAEKWHHYWYH--NPLPFVTDGVVLRQTKEPQGRY--W 296 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + WA+A+K+P Q+ V DV F VGRTG + V +L + + VS + + Sbjct: 297 RNTSADWAIAWKYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLS 356 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 ++ + GD+V + AG IP++ NVV R + +V P+ + A Sbjct: 357 RWKQWDVLPGDRVSVSLAGQGIPRLDNVVW--RSTERLPIVSPSEH----------DFHA 404 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 + +C Q L +++ G+ D + +L++ + LT +L Sbjct: 405 FSCFRYSTVCQQQFLARLVWLSGEHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQL 464 Query: 483 TGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + MG K A+++ +L+ A++ +R+L ALG+ +A A AL+ + Sbjct: 465 NAVTGMGDKRARDIYKSLQSARQMPLSRWLLALGLP---VPRSAISALNHVNWLALQQWT 521 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 ++ ++ +G A + F + I Sbjct: 522 AQQWRQFSGIGERRAEEIMAFLKHPAVVEFI 552 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 141/573 (24%), Positives = 228/573 (39%), Gaps = 46/573 (8%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E+++ L + + Y+ + D YD R L P L P T Sbjct: 52 EAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYDSAKRRLAHWAECFPLLAKPSVNTHE 111 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 A H V + + D ++ + R + K+DG+AV Sbjct: 112 PTGAK-------HHPVAQTGIAKLPDRDAVAGWVAR-------QGDHPLWVQPKVDGVAV 157 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y +G L +A +RGDG +G+D + I AIP L + P + ++GE++ Sbjct: 158 TLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLVI-LQGELY------ 210 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + + G A R AG + + + G+ V PDT Sbjct: 211 ARRTAHRQSRDGTDGARAR--IAGLMARDTLTDREGSTI-----GLFVWAWPNGPDTMPE 263 Query: 242 RLLQFKKWGL-PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL WG V++ +AE++ A+ + R L F DGVV+K Sbjct: 264 RLETLAGWGFGDVAEMTHGVATAEDIAAWRQRWY--RHALPFATDGVVVKRGDRPPGSD- 320 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A P WA+A+K+PA+E + V +EF VGRTG I VA LEPV + V+ +L + Sbjct: 321 -WQASPPDWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSLGS 379 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 R +R GD+V +R AG IPQ+ VV+ RP + + ++ + Sbjct: 380 LAHWRRTDVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQVDAP----------EADQYDR 429 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + R T C Q L+ S +D G+G +QLV+ V D L Sbjct: 430 LSCLRFT--PACRDQFLARLEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLDTA 487 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 L L +G K+A+ A + R+L ALG+ V +G + L Sbjct: 488 ALEALPGVGKKTARAWQRHFALADTRSAVRWLRALGVPAVPRQALTDALERYG-MAGLGT 546 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVI 573 + + + +G A + FF + R+ + Sbjct: 547 LAPPDWRDYSGIGETRAMQLTRFFRDTDIRHWL 579 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 128/571 (22%), Positives = 235/571 (41%), Gaps = 56/571 (9%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + +++ L+ L + Y+ IPD +YD L +LR+ + SP + Sbjct: 27 ADAEISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGKLRQWQRCF-------SPASDLR 79 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L ++ H V + + + D+ + + R + + K+DG+AVS+ Sbjct: 80 KPLLKTDGKVLHPVSHMRVKKLPDKTALTRWMAR---------RSGLWVQPKIDGVAVSL 130 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 LY +G L +RGDG GED T R I IP + +GE++L K Sbjct: 131 LYRDGQLEQMISRGDGVRGEDWTEKARLIPDIPKFIPHSMRVQVF--QGELYL------K 182 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 + + + G N R+A AG+L P ++ G V E + P + RL Sbjct: 183 MTDHRQAINGG--KNARSAVAGALMAKAPAPLLQQ------IGFFVWEWPDGPTSLAQRL 234 Query: 244 LQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + G P +S ++ +EV ++ + L F DG+V V+S+ + + Sbjct: 235 TETRSLGFPDISAWTHRVDNVDEVESWRERWFHQ--PLPFVTDGIV--VHSIPTRRGSDW 290 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + W +A+K+ E VR VEF +GRTG + V L PV + +S ++ + + Sbjct: 291 LPEFGEWVIAWKYAPPEATAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGSIE 350 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERVEG 420 ++ + GD+V I AG P++ V+ ER + + C + Sbjct: 351 NWKQTDVIAGDQVSISLAGLGAPRLDKVLWRVAERAYPPQPDAAQFNSVSCFHLTPQ--- 407 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 C Q L+ + +++ G G + QL++ + LT Sbjct: 408 -----------CRQQFLARLEWLGGKSVLNLVGTGRQTWQQLIQSGSMVHIFSWLALTKE 456 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 +L + +G + AQ + +++ F R++ ALG+ + E L + L + Sbjct: 457 QLEAVPGIGEQRAQLFWQQFKLSRQLPFKRWVKALGVP-IPEKALNTLTD--DNWQPLVS 513 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRN 571 ++E Q++P VG +A + +F + R Sbjct: 514 RRLQEWQQLPGVGRKLAGKIVSFLQQREVRQ 544 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 146/670 (21%), Positives = 269/670 (40%), Gaps = 71/670 (10%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 EL + Y P I + +YD + L L+ K P ++P + Sbjct: 23 EELSIFCQTANLAY-RSGKPIISNEDYDFIY--LATLKNKEP-----NNPLFKSIEPEGR 74 Query: 69 AF--SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK----NNEKVTWCCELKLDGLAVS 122 AF ++ MLS+D + + +R++ + + KLDG A Sbjct: 75 AFAEEKVLLPELMLSIDKAYSWNEMSKWIERLEKSGMLIGLDLNAIQIKATPKLDGFAG- 133 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 +++G TRGDG G DI+ + + K G + A GE+ + ++ FE Sbjct: 134 --FDDG--NRLYTRGDGKKGSDISRVFKRGLCV-FKDSGRGLGA-----GEIVVKKSYFE 183 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 K F PRN + +++ A++ + Sbjct: 184 KYLVH-------SFEYPRNFQSSLIKEKALDEQAQKAII----------------DKGAL 220 Query: 243 LLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + F K + L EE+++ + + FD+DGVV +V ++ + Q+G Sbjct: 221 FVPFIKLPIWSGSMTELVAKFEEIVS------QVLVMVDFDVDGVVFEVINIDLKTQMGA 274 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + RW +AFK V +V QVGR+G ITPVA +EP ++G + T H+ Sbjct: 275 NRKFHRWQIAFKENKDIVQVKVLNVMPQVGRSGKITPVAEVEPTLLSGATIVRVTGHHYG 334 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 ++ GL IG V + R+G VIP++++V+ V P +C CG + Sbjct: 335 LVKEQGLGIGSVVELTRSGLVIPKIISVLKP------MPVDIPDNCLSCGMPLVWESD-- 386 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 C C AQ + +F A + DG G +++L + + + ++ L +L Sbjct: 387 FLVCVNHKNCPAQIIGRITYFFKVLANN-DGFGIATVEKLYAHN-IRSVSQIYTLNVERL 444 Query: 483 TGLERMGPKSAQNVVNALEK--AKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 + G K++ N+++ L + +++ RFL A G+ +G L + L + Sbjct: 445 MAI-GFGEKTSINLISQLSRSISEKIEDWRFLAAFGMHRMGLGNCENLLKSYR-LNDIFD 502 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 ++E++ + + A + + + + Sbjct: 503 LTLEQITNIDGFAELTAQVIVQGLVS-IVDEYNQIYQYNFNLDTTVFTKDLQTLMHELFD 561 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQELGIEV 659 K +V TG ++ R++ K +G KV+ ++S K D ++ G G K+ A++LG+ V Sbjct: 562 KRIVFTGKMNC-PRNEMKKHAKLVGIKVSTTISTKIDYLVIGSRVGQKKIQNAEKLGVVV 620 Query: 660 IDEAEMLRLL 669 + EA+ L + Sbjct: 621 MTEADYLSKI 630 >UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPT5_9BACT Length = 647 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 170/678 (25%), Positives = 277/678 (40%), Gaps = 76/678 (11%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 + L+ L LY + DAEYD L+ ++ + + + +VG Sbjct: 3 IDALKAKLDQANQLYRTGGESPLSDAEYDYLLEQVNDQKFR-----------DKVGYEIE 51 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 +++ VPM SL+ + + ++K L C K DGL++ + + + Sbjct: 52 K--NKVELAVPMGSLNKIKTQAEVFDWSKSKSIPL----DTEICVTPKYDGLSLLVYFVD 105 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 G+ A TRGDG G+D+ + L+L + + GE + +A F+ + Sbjct: 106 GIYKGAYTRGDGMFGQDVGEHFTVNPLCDLRLPQDFTGYLI---GECIMDEAKFQTKYSE 162 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQF- 246 F NPRN AG L + T R L CY + ++ ++ Sbjct: 163 K-------FKNPRNMVAGLLSRK----TLSRELADVCYVAYGVRSAQMAHKQ-DQVEFCN 210 Query: 247 ----KKWGLPV-SDRVTLCESAE-EVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +W V L + + E+ Y F DG+V+++N Q+ Sbjct: 211 RYINAQWKYKVLCPLYKLEDLKDAELQKVYD------SETRFQCDGLVLEINDSDLFHQI 264 Query: 301 GF--VARAPRWAVAFKFPAQEQM-TFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 G + P A A+K + + + + V++V +Q+ + GA PV R+EP+ +AGV +SN T Sbjct: 265 GKETNSLNPGAARAWKPESDDSLPSIVKEVVWQISKNGAAKPVIRIEPIDLAGVTISNVT 324 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVER 417 NA IE G+ G V I R+GDVIP+V+ V P V P CP C S++ Sbjct: 325 GINARFIEDSGIAKGATVTIIRSGDVIPKVIGV-----PNAIENVDLPKQCPSCESELVW 379 Query: 418 VEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKL 477 E C L C A K +L F S + D +G+ II L + Y + +L L Sbjct: 380 NENRVDIVCENKL-CPATNKAALIDFFST--LKADEVGEGIITSLWDAGY-QSVKNLLNL 435 Query: 478 TAGKLTGLERMGPKSAQNVVNALEKA-KETTFARFLYALG-IREVGEATAAGLAAYFGTL 535 T L LE + A+ V+++++ + + R +A + +GE L Y Sbjct: 436 TMEDLLKLEGFKQRKAKKVLDSIKISVVDVPLPRLQHASNLFKGLGEKKLELLQKYD--- 492 Query: 536 EALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEID 595 +A S EEL +V + A + L Sbjct: 493 QAGIKPSFEELLEVDGYSEISAKSYLDSIDAYWEFAAELPGLKYKKVLVNEGG------- 545 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEA--AGSKLAKAQ 653 FAG+T+V TG S + + ++ G K+ SVSKKT +++ SK KA Sbjct: 546 -MFAGQTLVFTGFRSP----ELEEQVKTEGGKIGSSVSKKTSVLVVKAKGSGSSKEKKAI 600 Query: 654 ELGIEVIDEAEMLRLLGS 671 +LG+EV ++ L S Sbjct: 601 DLGVEVWGRDDLENKLNS 618 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 141/573 (24%), Positives = 240/573 (41%), Gaps = 59/573 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++ +LR TL + + YH + D YD+ L L+ + T SP Sbjct: 29 KQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFGQEFTDPSP--- 85 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +A I H V ++ + D + + K + K+DG+AV Sbjct: 86 ----LASARGPIAHPVAHTGVEKLHDAAAVARWM---------TGKKGVWVQPKVDGVAV 132 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y G LV +RGDG G D + +++ + +I +L P + ++GE++L Sbjct: 133 SLVYRQGRLVQLLSRGDGLQGHDWSRHIKDLDSITRQLPQ---PLDVVLQGELYL----- 184 Query: 182 EKINEDARRTGGKVFANPRNAAAGSL--RQLDPRITAKRPLTFFCYGVGVLEGGELPDTH 239 ++ + G +N R AG L +QL P A G+ V + PD Sbjct: 185 -RLQAHVQAEAGS--SNVRGTVAGMLARKQLGPEPGAS-------IGLFVWDWPHGPDNQ 234 Query: 240 LGRLLQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 RL Q WG P S R T ++ EE + R L F DGV+++ +S + Sbjct: 235 GERLTQLAAWGFPDSQRFSTAIDTPEEATHWRLHWY--RSPLPFATDGVILRQDSRPPAD 292 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 + + AP W A+K+P + + VR+V F +GRTG +TP+ RL+PV + +S +L Sbjct: 293 R--WQPNAPYWIAAWKYPFAQALAEVREVRFLIGRTGKVTPLLRLKPVTLDDRRISQVSL 350 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 + L +R GD+V I AG IP+ VV R + + + P E+ Sbjct: 351 GSLARWRALDIRPGDQVAISLAGLTIPRFDQVV--HRAVERQVLPVPE--------AEQY 400 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + + + G C Q L ++ + + G G +LV+ V + D L Sbjct: 401 GQHSCWQASDG--CQEQFIARLVWLSGKQGLAMPGTGKGTWKRLVQAGLVTSLTDWLTLD 458 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 A +L + + K+A + + + + FA++ LG+ A + L Sbjct: 459 AQQLLSVPGISRKTATQLQRSFDIGRNRPFAQWRKGLGVP------APAQVPRDENWQTL 512 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRN 571 S + Q +P +G A+ + NFF E + Sbjct: 513 AGRSASDWQTLPGIGATRATQLANFFTHEQVQR 545 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 120/581 (20%), Positives = 215/581 (37%), Gaps = 53/581 (9%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ ++ + YH I D YD+L + L ++ L Sbjct: 31 ELVTEIAKMEEQFGQWDKAYHQQGNSLIDDDIYDQLHQRLSHWKSCVKALEPA---VNSH 87 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 A ++ H V L + + + + + K+DG+AV+ Sbjct: 88 ITALAGVSDKVTHPVAHTGLKKLTGNLAASEWI---------LARKNLWVQPKVDGVAVT 138 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFE 182 + Y G L +RGDG G+D T + I AIP + P L + GE+FL Sbjct: 139 LTYLQGHLTQVISRGDGVRGQDWTDKAQYISAIPSLISPA--PPLLVLHGELFL------ 190 Query: 183 KINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGR 242 ++++ ++ G + N R + AG+L + P + GV + + P + + + Sbjct: 191 RVHDHRQKDSGGI--NARASVAGALMRKSPSSLLSQ------IGVFIWAWPDGPASMVEK 242 Query: 243 LLQFKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 L + G +S+ ++ S + + + + L F DG+VI+ Sbjct: 243 LRTLHRMGFTLSEEFSVPITSFTDAVHWRKIWFQ--SPLPFVTDGIVIRQEEEPAGHY-- 298 Query: 302 FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNA 361 + ++ W++A+K+P +QM V+ V F +GRTG I+ V L P+ + V L Sbjct: 299 WQSQPGYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKWVKGVNLGTV 358 Query: 362 DEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVERVE 419 +R + GD+V++ AG IP++ V +R E + + H C Sbjct: 359 ARWKRWNVLPGDQVIVSLAGQGIPRLDKVAWRVDKRDEISTPDMDQFHTFSCFRR----- 413 Query: 420 GEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTA 479 +C Q L R +D+ G+ I L + A +LT Sbjct: 414 --------ESTLCETQFIARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLASWLELTP 465 Query: 480 GKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALE 539 + + +G A + +KAK F +L ALG AA T AL+ Sbjct: 466 EIIATVPGIGEVKANKIYLQFQKAKTRPFISWLAALGFP-----KAAINPRVPKTWAALQ 520 Query: 540 AASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 E + ++G + F + L Sbjct: 521 QQPRGEWLTMANIGAGRLKQITEFTTHPEMLQLAERLAYHQ 561 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 142/582 (24%), Positives = 225/582 (38%), Gaps = 57/582 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 E Q++ L + L + Y + + DA YD + + L +T S Sbjct: 16 EQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCF-------SLATV 68 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 A P A + H V + + D S + + K + K+DG+AV Sbjct: 69 SAAPPPVAAGRTHHPVAHTGVQKLKDAASLSQWM---------HGKTDLWVQPKVDGVAV 119 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 S++Y G L +RGDG GED T+ R I AIPL++ GE + L +GE+FL + G Sbjct: 120 SLVYRKGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVL--QGELFLRREGH 177 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 ++ GG N R AG++ + + + + P Sbjct: 178 -----HQQQDGG---INARAQVAGAMMRNTASPLLNDL------DLFIWAWPDGPKEMET 223 Query: 242 RLLQFKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 RL + G P++ + S +V + + R L F DGVVI+ +E Sbjct: 224 RLTILAQGGFPLARAWSQPVSSVADVTRWRKQWF--REPLPFVTDGVVIR----EAREPP 277 Query: 301 GFVARAPR--WAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 G R W A+K+P +Q+T V + F VGRTG I+ VA+LEP+ + VS ++ Sbjct: 278 GKSWRPGEGSWVAAWKYPPVKQVTEVNALRFAVGRTGKISVVAQLEPITLDDKQVSKVSI 337 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERV 418 + E+L L GD+V + AG IP++ VV RP + P R Sbjct: 338 GSLTRWEKLDLAEGDEVEVSLAGQGIPRLDAVVW--RPAKRSKPAPP---------AARF 386 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 + + TG C Q L + D+ GMG+ QL + L+ Sbjct: 387 DALSCLFATG--ACEEQFISRLVWLSGKPVFDLAGMGEATWRQLSSRHRFEHLFSWLALS 444 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 L A + + ++ F R++ ALG+ A A T L Sbjct: 445 VDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLPLPARAW---QALADDTWHQL 501 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEG 580 + Q +P VG A + N+ + L+ + Sbjct: 502 QMRDERSWQTLPGVGAERARQLVNYIHHPDVAALAQWLVEQK 543 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 123/572 (21%), Positives = 223/572 (38%), Gaps = 60/572 (10%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 I ++ L L YH + D YD+L +LR ++ +S Sbjct: 35 TRIAVEINALEQQLNKWSAAYHQQGHSPVTDDIYDQLQDKLRVWQSCRGLPDKTES---- 90 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 P+ Q H V L + DE + + + + K+DG+AV Sbjct: 91 ---QPIPGKGQFLHPVAHSGLKKLKDETALTRWMA---------GRKNLWVQPKVDGVAV 138 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y G LV +RG+G G++ T I AIP + N PA L ++GE+FL G Sbjct: 139 TLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYI--ANAPALLTLQGELFLLMDGH 196 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 + ++GG N R+ AG+L + P + GV + + P T Sbjct: 197 Q-----QAKSGG---VNARSTVAGALMRKSPSPLLAQ------VGVFIWAWPDGPTTMKE 242 Query: 242 RLLQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 ++ + G P + S +V+ + + L F DGVV++ Sbjct: 243 KVALLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQ--APLPFVTDGVVVRQEEEPAGRY- 299 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A +W++A+K+P + + V+D+ F +GRTG T V + P+ + + + + Sbjct: 300 -WQATPGQWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNIGS 358 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVCGSDVERV 418 ++ + GD + + AG IP++ NVV +R T H C + Sbjct: 359 VTRWKQWDIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITAPNWDKFHQLSCFQRL--- 415 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 C Q L +D+ G+G +L+ E ++ LT Sbjct: 416 ----------PHGCEPQFLSRLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLLT 465 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 ++ + +G A+ + ++AK+ F+R+L ALG +V A + + Sbjct: 466 PEQIASIPGIGNARAEKIYQQFQRAKQQPFSRWLLALGFPQVVSVDAQ--------WQVV 517 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 S+ E + +G + A + +F + Sbjct: 518 LRRSLSEWATMAGIGQMRAKQIKHFLDHPDVQ 549 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 140/370 (37%), Positives = 203/370 (54%), Gaps = 20/370 (5%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 I ++ LR + + Y YH + P I D+ YD L+REL++LE+K P + +S T +V Sbjct: 315 DILDRVETLRRVIADYSYQYHTLGNPLISDSAYDALVRELKDLESKLPAEASEESVTAKV 374 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT------WCCELKL 116 GA P +++RH VPMLSL V+ E+ A+++R+Q RL W E K+ Sbjct: 375 GAPPPLEIAKVRHAVPMLSLAAVYKEDELKAWHERLQQRLNRMSNGEQPSTGAWVVEPKV 434 Query: 117 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEN-----IPARLEVR 171 DG+A+++LYE G LV AATRGDG GED+T N R ++ +P L + + LEVR Sbjct: 435 DGIALTLLYERGKLVCAATRGDGAEGEDVTHNARNLKGVPEVLSDHHKEINLQESVLEVR 494 Query: 172 GEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLE 231 GEV++ F+++N+ + G K FANPRNA AGS+R L R R L+F Y + E Sbjct: 495 GEVYMTLLDFQELNDMKVKGGEKPFANPRNATAGSMRILKNRDGDDRRLSFMAYAILSPE 554 Query: 232 G---------GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGF 282 L L K+ V+D S ++ L + + + R TL + Sbjct: 555 DNVSAGVETPPRLVRAQWDALNLLKQLDFSVNDDNRKFASFDDALHYATRWRDSRSTLKY 614 Query: 283 DIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVAR 342 + DGVV K+N LA Q +LG V PRWAVA+KF A E +T + +E +GR+GAI P AR Sbjct: 615 ESDGVVFKINDLATQAKLGVVGSDPRWAVAWKFAATEVVTILEGIELSIGRSGAIIPNAR 674 Query: 343 LEPVHVAGVL 352 L+ + V+ Sbjct: 675 LKDITVSSSS 684 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 35/317 (11%) Query: 386 QVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVS 445 QVV V+ R + V P CP C ++ + + C C + +KHF Sbjct: 830 QVVQVLRELRSDHMHSWVPPDRCPFCNGELTVSKDNNITSCCNN-KCPGRHSRKIKHFAK 888 Query: 446 RRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKE 505 G+G I+ L E V PAD + L L+ L+ +G KSA +V A+E++K Sbjct: 889 TL---FKGLGPSILSDLEEAGMVVDPADFYALDVVSLSRLDGLGEKSAAKLVKAIEESKG 945 Query: 506 TTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFA 565 + ALGI VG A L +FG++E L AS EEL VP +G V AS +H++ Sbjct: 946 KALWELITALGIPSVGVTAAKLLEQWFGSMERLLVASREELLLVPGIGTVSASAIHDWCT 1005 Query: 566 EESNRNVISELLA--EGVHWPAPIVINAEEID---------------------------- 595 + N ++S + + P + N + Sbjct: 1006 DPFNVQLVSSIKEAGFSPTFNDPEIENHAAGNALSDSASQTTTSKVRTTDSEESKGNVET 1065 Query: 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAG-SKLAKAQE 654 GK VV+TG + SR+ + +V G ++ SV+ KT ++AG++ G SK+ KA + Sbjct: 1066 PRLQGKNVVVTGEFEEYSREQIEQLVVLNGGQLRKSVNSKTSFIVAGQSPGPSKMTKAAQ 1125 Query: 655 LGIEVIDEAEMLRLLGS 671 L + V+D + +LL + Sbjct: 1126 LAVPVLDISSFQQLLEN 1142 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 130/579 (22%), Positives = 219/579 (37%), Gaps = 53/579 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 Q+ + L + + Y A + D YD+L L + P D Sbjct: 36 RQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPEDDDLPPPTG 95 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 RH V + + DE+S + K K + K+DG+AV+++ Sbjct: 96 DA-------RHPVAHTGVRKLADEDSVARWMK---------NKSDLWIQPKVDGVAVTLV 139 Query: 125 YENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKI 184 Y G LV A +RGDG GE T+ R I A+ + GE + L +GE+FL + G Sbjct: 140 YRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVL--QGELFLRRDGHV-- 195 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 ++TGG N R AG + + D + V + + P R Sbjct: 196 ---QQQTGG---MNARAKVAGLMMRADAAAALSQL------DVFIWAWPDGPSDMRRRQQ 243 Query: 245 QFKKWGLPVS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFV 303 + G S E+V + + R L F DGV+++ + Sbjct: 244 LLAQAGFKYSGQYTHPVSRIEQVAQWRQRWY--RSPLPFVSDGVIVREGREPPGRV--WS 299 Query: 304 ARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADE 363 W A+K+P ++ VR + F +GR+G + VA LEP + V + + Sbjct: 300 PGKGEWLAAWKYPPASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSR 359 Query: 364 IERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAV 423 + L + +GD++ I AG IP+V VV T E PT P A+ Sbjct: 360 WQMLDIGVGDQLQISLAGQGIPRVDAVVWR-----TAERHKPTPPPAKF--------NAL 406 Query: 424 ARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 C Q L S+ A++VDG+G+ + + ++ + LT +L Sbjct: 407 TCYFATPECSEQFLSRLIWLSSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQ 466 Query: 484 GLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASI 543 + + Q++ + + ++ F R++ A+GI A A + L A S Sbjct: 467 AVPGISAARGQHLWHQFDLVRKRPFIRWVLAMGIPVPQGALAQLESE---NWHLLAAKSE 523 Query: 544 EELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVH 582 + + +P VG + A + F + L + + Sbjct: 524 AQWRTLPGVGEIRARQLVAFLHHPDVVALAQWLSGQRIP 562 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 126/520 (24%), Positives = 226/520 (43%), Gaps = 50/520 (9%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 + ++++ L + H + LY EI D YD+LM EL H + +P Sbjct: 37 DKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYDQLMSELT-----HWQFCLKQAPHSD 91 Query: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAV 121 +++ H V L + D++ + + ++ + K+DG+AV Sbjct: 92 FPVEVFPD-NKLVHPVAHTGLSKLKDKQEINRWL---------HGRLPVWLQPKIDGVAV 141 Query: 122 SILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGF 181 +++Y+NG LVS +RG+G G + T+ R I IP + EN P L ++GE+FL + Sbjct: 142 TLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNI--ENAPPDLVLQGELFLHKE-- 197 Query: 182 EKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLG 241 E ++ G A RN AG + + D K+ G+ + + P Sbjct: 198 ----EHRQQLLGSDGA--RNRVAGLMMRKDHSSELKQ------IGLFIWSWPDGPAEMES 245 Query: 242 RLLQFKKWGLPVS-DRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300 +L + G P++ E E+V E + F DG+V+K + Q Sbjct: 246 KLRKLADMGFPLALRYSHKIEEPEQVQKLRMHYFEQ--PMLFATDGIVLKQEIEPKGNQ- 302 Query: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + + + WAVA+K P + Q+T VR+V F +GRTG I+ V L+ V + +S + + Sbjct: 303 -WRSGSNSWAVAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVNIGS 361 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420 +L + GD+V + AG IP++ VV R ++ +++ P ++ Sbjct: 362 VRRWRQLDVLPGDRVTLTLAGHGIPKLAQVVW--RIKERQDIQPP----------DKQHY 409 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 A++ T + C Q LK + + G+ L E++ V L+A Sbjct: 410 HALSCLTLTVGCEQQFNARLKWLG--ENLQMTGVSSGSWAMLTERKLVTDLTGWLALSAQ 467 Query: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREV 520 ++ L +G K AQ + + KAK F+ ++ +G+ + Sbjct: 468 QIAALPGIGDKRAQAIYSQFSKAKNQPFSYWMKGIGVPYM 507 >UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM64_9BACE Length = 652 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 154/690 (22%), Positives = 282/690 (40%), Gaps = 79/690 (11%) Query: 11 LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAF 70 L ++ H +Y M APEI DAEYD + L+ L+ + E P A ++ Sbjct: 13 LLDMIKRHNKMY-RMGAPEISDAEYDAEIELLKTLDPDN-EWFKHTEP------AFVSET 64 Query: 71 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 130 + +PM SL+ V D + L C KLDGL+ +LY N + Sbjct: 65 RKRALPIPMKSLNKVKDISELKKWYMS----LGLKGNAGVVCMPKLDGLS--LLY-NELT 117 Query: 131 VSAATRGD-GTTGEDITSNVRTIRAIPLKLHGENIPARLEVR-GEVFLPQAGFEKINE-D 187 A +RG G+D T++ + N + GE + ++ +E+ Sbjct: 118 GEAYSRGGIENEGQDCTNHYQA------STQCYNPASSFHYTFGEFVINRSDWEQHFHGK 171 Query: 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL------G 241 + G +F +PRN AAG L + +P + +FF YGV + + H Sbjct: 172 RSKFTGDIFKSPRNTAAGLLNRDEPCDYLEHA-SFFRYGVDESSLHDYNNFHSLIETICN 230 Query: 242 RLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG 301 Q + D + + E ++ + + + + IDG+VI V+ L E +G Sbjct: 231 IYQQEHLYHFAFIDEL----NEELLMNLFKEWSKI-----YPIDGIVIYVDDLRLWEVIG 281 Query: 302 F--VARAPRWAVAFKFPA--QEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNAT 357 + P +A+A+K P + T V+ + ++V ++GA+ PV +E V + N T Sbjct: 282 RHQTSGNPLYAIAYKHPDFTESFETTVKGIVWKVSKSGALKPVVNIEMVDTGDCNMENPT 341 Query: 358 LHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVV-LSERPEDTREVVFPTHCPVCGSDVE 416 +NA I + G ++++ R+G VIP++++ + + + E + + CP CGS Sbjct: 342 GYNAGWINDHEIAKGAEILVTRSGGVIPKILSTLSPATQEEQEKLWDEMSECPHCGSSTM 401 Query: 417 RVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFK 476 E CT C + + F + MG++ + ++ + + + Sbjct: 402 WNENHIELCCTNP-SCPGVQLAKIIFFYLTCG--AENMGEETLSKIFNAGF-TSIPAILN 457 Query: 477 LTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLE 536 +T L +E G S N++ LE ++ ++ V AT + F + Sbjct: 458 VTFNDLIKIEGFGD-SISNII--LENNRKI----------MQGVDLATLMQASDCFKGIG 504 Query: 537 ALEAASIEELQKVPDVGI------VVASHVHNFFAEESNRNVISELLAEGVHWPAPIVIN 590 ++A I L ++ D + +H + +E+ I+ ++P + Sbjct: 505 KIKAQKI--LDEMDDEDLCSFCQGWYINHEPDVQSEDFKNCPITVQNLLLGYFPFMAFLE 562 Query: 591 AEEIDSPFAGKTVVLTGSLSQMS------RDD-AKARLVELGAKVAGSVSKKTDLVIAGE 643 +I + KT VL G +S RD + + G K+ VSKKT ++ + Sbjct: 563 ETKIPYKLSPKTAVLEGKCKGLSICVSGFRDSNLEEVITNEGGKIVSGVSKKTTHLVVKD 622 Query: 644 AA--GSKLAKAQELGIEVIDEAEMLRLLGS 671 + SK++KA+ LGI ++ E + Sbjct: 623 KSANSSKISKAKLLGIPILSIEEFCDFFNN 652 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 137/661 (20%), Positives = 261/661 (39%), Gaps = 83/661 (12%) Query: 16 RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRH 75 ++ Y + + D EYD L +L+ + VG +PL S+ Sbjct: 26 EKADHFYFNTEKEILTDNEYDILAEQLQ---------------STNVGCSPLI--SKTDL 68 Query: 76 EVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAAT 135 + M SLD V++++ + K+V + + KLDG++ I+ ++ L A T Sbjct: 69 PLWMGSLDKVYNDKELNLWIKKV-------ASDKYIIQCKLDGVSCLIINKDNKL-KAYT 120 Query: 136 RGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKV 195 RG+G G DI+ ++ + + +P + +R E+ + + F + + A Sbjct: 121 RGNGKVGTDISHLIKYF------IKDKCLPNNIALRCEIIIKKETFNQKYKHA------- 167 Query: 196 FANPRNAAAGSLRQLDPRITAKR--PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGL-P 252 F+NPR+ +G + + I L Y + E L ++ ++ Sbjct: 168 FSNPRSFVSGVVNRKQENIVISELNDLCLIAYELINFPVNEYQKNILTQIEIIEQLNFIQ 227 Query: 253 VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVA 312 + T+ A + +E + F++DG+VI N+ + P+ ++A Sbjct: 228 FVNFKTISNEFLTQKALSNLFKEMKNNSLFEMDGLVILANT----PYIRVTEGNPKHSIA 283 Query: 313 FKFPAQE-QMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRI 371 FK + V +E+ VG+TG TP + P + G VS T NA+ + G+ Sbjct: 284 FKVRGDNVKEAKVTFIEWNVGKTGVFTPKVHIVPTEINGTTVSCFTGFNANYLIEKGIGE 343 Query: 372 GDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLI 431 G +++ RAGD IPQ++ V + T + FP G R + Sbjct: 344 GAIILVTRAGDAIPQIIGV------KQTGVLTFPKDYEWKG----------DCRIVEKIE 387 Query: 432 CGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPK 491 + + + HFV ++D+ + + I++L + KLT L GPK Sbjct: 388 SKERIIKQILHFV--ESVDIPYIKEATINKLYNNGC-TSIELFLKLTQKDLLL---FGPK 441 Query: 492 SAQNVVNALEKAKETTFARFLYALGIRE--VGEATAAGLAAYFGTLEALEAASIEELQKV 549 + + N+++K+ E +FL +GE L + L LE +L + Sbjct: 442 LSSTIYNSIQKSFEAPIEKFLSGYNAFGDYIGEKKILLLLQKYPNLFELENLDAIDLVSI 501 Query: 550 PDVGIVVASHVHNFFAE-ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGS 608 +G A+ + F + N I + P N E+ V ++G+ Sbjct: 502 EGIGSKTATQIKQHFINAKLIYNNIIQNKLFKGVLHTPSKQNTVELF------KVCVSGT 555 Query: 609 LSQMSRDDAKARLVELGAKVAGSVSKKTDLVIA--GEAAGSKLAKAQELGIEVIDEAEML 666 + + K R G ++ +++KK ++I +K+ KA +GI ++ + Sbjct: 556 RDPLFIQELKNR----GFVLSDNITKKVKVLIVKNSNEETTKVKKANSVGITILTLEDFK 611 Query: 667 R 667 + Sbjct: 612 Q 612 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 139/667 (20%), Positives = 243/667 (36%), Gaps = 71/667 (10%) Query: 10 ELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69 ++ L YH I D EYD LM L+EL +VGA Sbjct: 24 DIEEALSVSSEYYHNTGTSLISDQEYDILMDRLKELNPSSKIFA-------QVGAPV--K 74 Query: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129 +++ M S++ + +E K V L + KLDG++ + +N Sbjct: 75 GKKVKLPFWMGSMNKIKADE------KAVNKWLNEYSG-PYVISDKLDGISCLLTIKNNK 127 Query: 130 LVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDAR 189 TRGDGT G+DIT + I I + L E I + +RGE+ + + FEK E Sbjct: 128 -TKLYTRGDGTYGQDITHLLGLI-NIDIGLLEE-IDQDIAIRGELIMSKKNFEKYQE--- 181 Query: 190 RTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKW 249 + AN RN G + + + E + D +L K+W Sbjct: 182 -----IMANARNMVGGIVNSKPESVNKDHAADV---DLIFYEVIKPNDKLSRQLKILKEW 233 Query: 250 GLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRW 309 GL V +L + E + G++IDG+++ N+ + G P + Sbjct: 234 GLKVVYYNIYKTFDVNILESV--LSERKKKSGYEIDGIIVTDNNKHVRNISG----NPSY 287 Query: 310 AVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGL 369 + AFK T V+ V + + G + P + + V ++ V + T NA I + Sbjct: 288 SFAFKGDTPTIDTVVKRVIWTPSKDGVLVPRIKFKKVRLSNVDLEYTTGFNAKYIVDNKI 347 Query: 370 RIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG 429 G + + R+GDVIP + +VV + D + + + Sbjct: 348 GSGAIINVVRSGDVIPYITHVVKPAKKPDLPNIEY-----------VWDKNGVNIILADI 396 Query: 430 LICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMG 489 + L F+ R + + + + I +LVE + T + +T ++ Sbjct: 397 NDNETVIIKRLTKFM--RNIGAENISEGITTRLVEAGF-DTIPKIINMTEEDFLTIDGFQ 453 Query: 490 PKSAQNVVNALEKAKET----TFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIE- 544 + A+ + N L+ + + T G R G + + + + Sbjct: 454 ERLAEKIYNNLQNSLDNLDILTLMDASNIFG-RGFGTKKFKKILDVYPNIVNQYTKETDN 512 Query: 545 ----ELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600 +L + + + N I+ + F Sbjct: 513 IWRKKLLDIEGFDTITVNKFLG-----EMPNFQKFYKVINKTITIKPYISEVNSEGIFQN 567 Query: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIA--GEAAGSKLAKAQELGIE 658 +TVV TG D + + G KV+GSVSK T L++ GE + +K KA++LGI+ Sbjct: 568 QTVVFTG----FRNADWQKFIENEGGKVSGSVSKNTSLLVYNDGEESSAKYQKAKQLGIK 623 Query: 659 VIDEAEM 665 + ++ Sbjct: 624 TMTKSSF 630 >UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain protein n=2 Tax=Providencia RepID=D1P0P2_9ENTR Length = 557 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 121/581 (20%), Positives = 219/581 (37%), Gaps = 68/581 (11%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + L L+ Y V I D YD+L+ + ++ + L DS +V Sbjct: 30 LINDHQRLGNQLQEWNKNYLVDGFSPINDEVYDQLLSKWQQRQRC---LSLSDS-LPQVP 85 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L ++H +P L + + + + + K+DG+AVS+ Sbjct: 86 LPILTPL--VKHPLPHTGLKK-QNLNEITTWIAKRK---------EIWLQPKVDGVAVSL 133 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y+NG LVS +RG+G G + I +P + I R+ ++GE+F K Sbjct: 134 VYDNGQLVSLISRGNGVEGLEWRKKADFILDLPKVIP---IKQRVILQGELFW------K 184 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 +N ++ G + N R+ AG L + + + G+ + + +L Sbjct: 185 LNNHVQKQLGGL--NARSKVAGWLMRKKLPEKIEDNI-----GIFIWAWPDGDLQQEVQL 237 Query: 244 LQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + G +S R S E+++ L F DG+V+K S + Sbjct: 238 SRLSEIGFDLSKRYSHQVTSIEQIIQRQEDYFST--PLPFATDGIVLK--SFPTPPSAAW 293 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 + WA+A+K+P Q ++ + ++F VGRTG + VA ++PV + VS+ L + + Sbjct: 294 QSNQNSWAIAWKYPLQNIISEITGLKFGVGRTGIVNVVASIKPVTLDAKQVSHVNLGSLN 353 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP--VCGSDVERVEG 420 ++ L +GD + + AG IP+V V+ D E + C S Sbjct: 354 SWKKKDLLVGDHIQLTLAGHGIPKVEQVIWRVAHRDYPETMLLEQFNRWSCFS------- 406 Query: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480 + C Q L + + + G+G+K Q E L +L Sbjct: 407 -------YSIECLPQFVARLTWLG--KQLGIKGVGEKTWQQWAEN------YGLSQLLEW 451 Query: 481 KLTGLERMGPKSAQNV--VNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 + PK+ N+ + L+K + A +L L I + T+ L Sbjct: 452 LSPSWQGQLPKTKTNLKHLEQLQKVADQPLAVWLKGLDIPL-----SNTEIKKIDTISML 506 Query: 539 EAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAE 579 +I + K+ D H + +I E+ Sbjct: 507 YEPTIIKYLKLSDKREQQFKHWIEVTEIKLALQIIQEIKKP 547 >UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUQ1_PROST Length = 570 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 106/529 (20%), Positives = 196/529 (37%), Gaps = 76/529 (14%) Query: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH-------PELIT 54 + ++++ +L L+ LY + + D YD+L+ ++ + P + Sbjct: 47 DELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQLPPIHLP 106 Query: 55 PDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCEL 114 P S T ++H + L + +E + + + + Sbjct: 107 PHSRT-------------VKHPIVHTGLKKL-NEVDIGKWI---------DTREEVWLQP 143 Query: 115 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEV 174 K+DG+A+S++Y+ G LVS +RG+G G + I AIP +L +L ++GE+ Sbjct: 144 KVDGVAISLVYQQGKLVSMISRGNGIEGLEWRDKADFIPAIPKQLPTSQP--QLILQGEL 201 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGE 234 F + +GG N RN AG L + +T + + V + E Sbjct: 202 FWRLKDH-----RQQASGG---VNARNQVAGWLMRKSKPVTPEANID-----VFIWAWPE 248 Query: 235 LPDTHLGRLLQFKKWGLP-VSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNS 293 + Q G P + +V + + + F DG+V+K S Sbjct: 249 GVGKAEEQWRQLANLGFPLTQQYSHKVTTMAQVKKWQSYYYQQ--PMPFATDGIVLK--S 304 Query: 294 LAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLV 353 + W+VA+K P + V D+ F+VGRTGA++ VA +EPV + V Sbjct: 305 FPTPRVAAWQVNHNSWSVAWKHPYTRIASKVTDLHFRVGRTGAVSVVAEIEPVELDSKKV 364 Query: 354 SNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS--ERPEDTREVVFPTHCPVC 411 S L + ++ L +GD + + AG IP++ +V+ +R H C Sbjct: 365 SRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKLESVIWRLQQRTYPDLSQFKQFHALSC 424 Query: 412 GSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTP 471 + C Q L + + + G+ + + E +++ Sbjct: 425 FVMTPQ--------------CEQQFVARLNWLG--KQLKIKGISEATWREWAEHYHLN-- 466 Query: 472 ADLFKLTAGKLTGLERMGP--KSAQNVVNALEKAKETTFARFLYALGIR 518 KLT + P K + ++ + +L LGI Sbjct: 467 ----KLTTWLSPSWQTSLPNTKKTKKIIEQFRLVGQQPLMNWLKGLGIP 511 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 136/528 (25%), Positives = 225/528 (42%), Gaps = 69/528 (13%) Query: 9 TELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 68 ++ +L Y D I D++YD L+ EL + H L +S Sbjct: 19 RQIEESLERANDAYRNTDDSIISDSDYDALIDELARRDPGHALLTEVES-------EADF 71 Query: 69 AFSQIRHEVPMLSLDNVFDEESFLAFNKRVQ---DRLKNNEKVTWCCELKLDGLAVSILY 125 ++RH++PMLS + V + A+ +RV+ + V KLDG+A + Sbjct: 72 GAGKVRHQIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL-- 129 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ++GVL A+RGDG TG +IT I KL + GE+ + Q+ F++ Sbjct: 130 KDGVL---ASRGDGLTGNNITH-------ILPKLVVHGVGD-----GELVMIQSYFDEHL 174 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 + F +PRN G++ PR A + L + H + Sbjct: 175 SE-------EFKHPRNVVTGAVGADTPRPAAMKAL----------------NDHSIHFVS 211 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 F S T+ E+ + + DG+V+ V S +++LG Sbjct: 212 FTTLTRIDSRTDTIVAQLPEIREY------LLGNTPYPTDGLVLAVESPELRKELGSTGH 265 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 W VA K + T V V++Q+G+TG +TPV +L+ V ++G +++N T HNA ++E Sbjct: 266 HHNWMVAAKTVGETATTAVVGVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVE 325 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 +G+ +G I R+G++IP +V+ + PTHCP C ++R Sbjct: 326 EMGIDVGAMATITRSGEIIPFLVSATPAPNGAS-----LPTHCPACTEHLKRRGD--FLV 378 Query: 426 CTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGL 485 C C +R L HF + +D G D+L+ V + ++F +TA + + Sbjct: 379 CINNE-CEGRRHARLHHFFNIIG-SIDLFGPVACDKLIAAG-VRSIQEVFAITAAEFEAM 435 Query: 486 ERMGPKSAQNVVNALEKAKETTFA--RFLYALGIREVGEATAAGLAAY 531 GP + N+V LE AK R L A+GI +G + L + Sbjct: 436 -GFGPGQSANLVAELEAAKTRPVDDFRVLAAMGISNLGRGDSKKLLRH 482 >UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophonus nasoniae RepID=D2U3F9_9ENTR Length = 547 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 104/543 (19%), Positives = 203/543 (37%), Gaps = 84/543 (15%) Query: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 + +++ + + L+ + Y++ + D YD++ + L P T + Sbjct: 46 LHREIKAINSELKRWDEAYYINGQSLVNDETYDQIFALWKHWSNC---LRLPPDKTNTL- 101 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 L + H V L + + + + + K+DG+A ++ Sbjct: 102 --SLPIKGRKTHPVIHTGLKKI-TADEIARWIA---------GRHEVWLQPKVDGVAATL 149 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +Y+ G L + +RG+G G D T + AIP + N +L ++GE+F Q G + Sbjct: 150 VYKKGKLAALISRGNGIEGIDWTPKADFLPAIPKTIP--NHATQLILQGELFWYQTGHQ- 206 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRL 243 GG AN RN AG L + + + + + G+ + + P + Sbjct: 207 ----QAIAGG---ANARNKVAGWLMRKNLLVQQEEQI-----GIFIWSWPDGPSNMQTQF 254 Query: 244 LQFKKWGLPVSDRV-TLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLG- 301 Q ++WG P++ R L S +++ + + F DG+V+K LG Sbjct: 255 AQLERWGFPLTKRYSHLVTSVDQITQWQRYYYNQ--PMPFATDGIVLKQ----LPYTLGQ 308 Query: 302 -FVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 + A W+VA+K+P Q ++ V V+F +GRTG I P+ Sbjct: 309 YWQAGINNWSVAWKYPTQNRVAQVAAVKFNIGRTGKINPII------------------- 349 Query: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEDTREVVFPTHCPVCGSDVERV 418 G+ GD + I +G IP+ +V +R + H C R Sbjct: 350 -------GILPGDAIQISLSGHGIPKFDKIVWQIKQRKMLSVPEQKNYHQLSCFYYSMR- 401 Query: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLT 478 C +Q L + + ++G+ +K L+ + D +LT Sbjct: 402 -------------CESQFVARLVWLA--KQLKMEGINEKGWLALIRAGKITNLMDWSRLT 446 Query: 479 AGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 ++T + + + A++ F+ +L LG+ + + + + + Sbjct: 447 LEQITEVAMFKANKGKFIYQQFLSAQKRPFSEWLKGLGVPLPEKLFSKINCWNDLSSKEI 506 Query: 539 EAA 541 +A Sbjct: 507 NSA 509 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 118/576 (20%), Positives = 224/576 (38%), Gaps = 67/576 (11%) Query: 6 QQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 65 + L L+ + Y + E+ D YD+++ + R + L PD Q V Sbjct: 48 AEQLRLGEQLQEWDRQYQIEGVSEVSDEVYDQILAQWRRGQRC---LNLPDRLPQPV-QP 103 Query: 66 PLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 125 ++H +P L + + + + + + K+DG+AV++ Y Sbjct: 104 NTERL--VKHPIPHTGLKKL-EFKEIAPWLESRH---------EVWLQPKVDGVAVTLHY 151 Query: 126 ENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKIN 185 ENG LVS +RGDG+ G + I+ IP + I + ++GE+F K+N Sbjct: 152 ENGHLVSMISRGDGSKGLNWREKADFIQGIPKTIS---IKQSIVLQGELFW------KLN 202 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 E ++ G N R+ AG L + D + GV + + +L + Sbjct: 203 EHVQKIDGGQ--NARSKVAGWLMRKDMPAQVTDDI-----GVFIWSWPDNSTPMSQQLSE 255 Query: 246 FKKWGLPVSDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVA 304 G ++ R + ++ + + ++ F DGVV+K S + A Sbjct: 256 LAMLGFDLAQRYSHPIVESQSIAQWRDHYYSI--SMPFATDGVVLK--SFPTPSSSAWRA 311 Query: 305 RAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEI 364 W++A+K+P + ++ V D+ F+VGR+G + +A +EPV + VS L + + Sbjct: 312 NQNSWSIAWKYPLKSIVSDVVDLTFRVGRSGVVNVIANIEPVRIDDKKVSKIRLGSLNSW 371 Query: 365 ERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVA 424 ++ + +GDK+ + +G P + V+ ++P + A++ Sbjct: 372 KQKDVLVGDKIQLTLSGHGAPLMEKVIWRQKPRQYLNT------------LPLENFHALS 419 Query: 425 RCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTG 484 + C +Q L + +++ G+G+K VEK L +L Sbjct: 420 CLSYSTDCASQFVARLTWLG--KQLNIRGVGEKTWMVWVEK------YGLSELLGWLSPD 471 Query: 485 LERMGPKSAQ--NVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAAS 542 + PK+ Q N + L++A+ A +L LGI E + A+ S Sbjct: 472 WQNRLPKTQQTANALEQLQQAQHQLTANWLKGLGIPLKSEQLEK--------IAAITTLS 523 Query: 543 IEELQKVPDVGIVVASHVHNFFAEESNRNVISELLA 578 E + V + + A + + L Sbjct: 524 EPEQIEKMAVSETRKQALQQWLAAPEIKQALQTLQN 559 >UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage RSL1 RepID=B2ZXT5_9CAUD Length = 625 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 138/676 (20%), Positives = 247/676 (36%), Gaps = 91/676 (13%) Query: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60 M+ Q L + + + Y+ + DAE+D L +R L+ K EL Q Sbjct: 1 MKVTAQNLNKAKKLYKQARVAYYEKAE-IMTDAEFDALEDSIRRLDPKWDEL-------Q 52 Query: 61 RVGAAPLAAFSQ--IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWC-CELKLD 117 + G + ++ M S + ++ E V + V KLD Sbjct: 53 KTGTKVEVKNKKQEVKLLEFMPSKNKIYPEH--------VAKYAAKHASVEVWNVSHKLD 104 Query: 118 GLAVSILYENGVLVSAATRGDGTTGEDIT---SNVRTIRAIPLKLHGENIPARLEVRGEV 174 G ++ + Y G TRGDG G+DI+ ++ I IP + + + + R E Sbjct: 105 GTSLQLAYRGGRPWKLITRGDGALGKDISFFLPHLVKIGMIPDHIKTDAL--VVVFRCEG 162 Query: 175 FLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLD--PRITAKRPLTFFCYGVGVLEG 232 +P A FEK + N R A G + D P + + YG+ Sbjct: 163 IMPVAVFEK-------KWAGKYDNARQLANGVFNRQDMHPALADVHMVVLSVYGMK---- 211 Query: 233 GELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVN 292 ++ K+ G V + + + + ++R +++DG+++ Sbjct: 212 ------QGEGIMYAKRQGFHVVP-TRMLKGRLDAEVLTRLLNKEREASIYEMDGLIL--- 261 Query: 293 SLAQQEQLGFVA-RAPRWAVAFKFPAQE--QMTFVRDVEFQVGRTGAITPVARLEPVHVA 349 + + + + P+ AFKF +E V V +Q R P ++P + Sbjct: 262 -VPSPRIMSYTSPDRPKDITAFKFNDEENAAEVPVESVVWQKTRLHRWQPKITIKPTFMD 320 Query: 350 GVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCP 409 GV+V+N T HN ++ G+ G V + R+G VIP++V VV + P Sbjct: 321 GVMVTNVTAHNPAWMKERGIGPGAIVKVLRSGGVIPKIVGVVK---KGKFQPPPGPYV-- 375 Query: 410 VCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVH 469 G EG+A + HF++ + ++ + K I +L E+ + Sbjct: 376 EDGRLFRMTEGDASTE-----------VRGIHHFMTT--LGIELLASKTITKLYEEGF-T 421 Query: 470 TPADLFKLT---AGKLTGLERMGPKSAQNVVNALEKAKETTFA---------RFLYALGI 517 T D L +G K +Q + LE+ +T F +G Sbjct: 422 TVYDYIDLAINGDEGRLQTAGIGVKMSQKIQAELERVLGSTINLRLLMVASGCFRDGIGR 481 Query: 518 REVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELL 577 R++ AAG++ F L++ + A EL KV + V + + + Sbjct: 482 RKLEALEAAGISMRF-LLKSSDFALRGELSKVKGFSDITIEAVIDGVN---AFRKWFDEV 537 Query: 578 AEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTD 637 E + + + + G+ V TG D + ++ G + SK T Sbjct: 538 RELLEVDGSLPKAKKVVTGKLTGQFVSWTG----YRNKDEEQKVEAWGGTIVPFGSKTTI 593 Query: 638 LVIAGE-AAGSKLAKA 652 L+ + SK+ KA Sbjct: 594 LLYSPSGKTSSKVEKA 609 >UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate iridescent virus 3 RepID=VF205_IIV3 Length = 756 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 140/766 (18%), Positives = 250/766 (32%), Gaps = 146/766 (19%) Query: 6 QQLTELRTTLRHHEYLYHVM-DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 64 ++ +L + Y+ P + D EYD L+ + EL +VGA Sbjct: 7 EKYNQLLKLKEKADKAYYNGVGDPIMSDEEYDNLVDYMDELNPDGGVKT-------KVGA 59 Query: 65 APLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 124 +P + ++ +PM SLD + + F + K + K + KLDG++ + Sbjct: 60 SPSRS-KSVKLPMPMNSLDKIKTQHEFDNWMKNWK------PKAMLLVKEKLDGVSCLAV 112 Query: 125 Y--ENGV--LVSAATRGDGTTGEDIT---------------------SNVRTIRAIPLKL 159 + E + TRGDGTTG +IT T L Sbjct: 113 FTLEQNKPPKIELFTRGDGTTGTNITRLLNHGLKVGNDYCFDDMVNEDKWTTDWGCYLNA 172 Query: 160 ----HGENIP-ARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRI 214 H + +P ++ +RGE+ + + F+ + F N RN +G + + P Sbjct: 173 EAIDHWKKLPVKKVYIRGELIVTRKNFQTWYSNR-------FMNARNLVSGQVNKKSPDP 225 Query: 215 TAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG-LPVSDRVTLCESAEEVLAFYHKV 273 + + F Y + + + TH L F+ G PV R + + Sbjct: 226 KILQDIDFVPYDLVI-DLKRPTMTHEVEHLLFRMIGATPVYTRFLFLSDTISTESMADYL 284 Query: 274 EEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGR 333 E + ++IDG+VI+V+ R P+ VAFK T V VE+ + + Sbjct: 285 ERRKEKSDYEIDGLVIQVDDDTLFAPPD--NRNPKDTVAFKIMGTTARTTVTHVEWNLSK 342 Query: 334 TGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS 393 P + PV ++GV +S T + I + G V+I R+G+VIP +V+V+ Sbjct: 343 GSKYKPTIHITPVSLSGVTISKVTGFHGKYISENKIGKGAVVLITRSGEVIPHIVSVIS- 401 Query: 394 ERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV-SRRAMDVD 452 P ++V+ P++ G G + + HF S + Sbjct: 402 --PAAKQDVLLPSNGVWKG---------VDIYYDGAEEPREITVKKMVHFFTSLGCL--- 447 Query: 453 GMGDKIIDQLVEKEYVHTPADL-------------FKLTAGKLT---------------- 483 G+ + +L + Y T + F++ A KL Sbjct: 448 GLKTMTVGRLYDAGY-RTVEAIVGADTKKLVLINGFRMVAQKLLPSMWVNVAKATPHELM 506 Query: 484 -GLERMGPKSAQNVVNALEKAKETTFAR---------------FLYALGIREVGEATAAG 527 L G + ++ +K + L A Sbjct: 507 AALNAFGEGIGLRKIQNIDCSKPEALEVIGMTKKTVETRIWPIWNDVLARVNALSRMAKS 566 Query: 528 LAAY---------------FGTLE--ALEAASIEELQKVPDVGIVVASHVHNFFAEESNR 570 FG+ + S ++ + A + R Sbjct: 567 QLRKQETGSCEPEEDDDYNFGSYHPCHMPCQSSNKIWECRSRSPSAAGS-ASPCRPTKRR 625 Query: 571 NVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAG 630 + + +V + + P G V T D + ++ LG KV Sbjct: 626 DDWFDSSESSCATETCVVESPPKKRPPMQGYVFVFTRFRD----KDLERQITALGGKVLN 681 Query: 631 SVSKKTDLVIAGEAA------GSKLAKAQELGIEVIDEAEMLRLLG 670 +V++ VI E KL A + + V + ++ Sbjct: 682 NVNQNVTHVITKEKGPYKKPYTGKLKFALDNNLFVWSLVHLKSIVA 727 >UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schistosoma mansoni RepID=C1M1N3_SCHMA Length = 311 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 120/208 (57%), Positives = 152/208 (73%) Query: 287 VVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPV 346 +V+KV+ Q+ LGFVARAPRWAVA+KFPAQE T + +E+QVGRTGA+TPVARL PV Sbjct: 1 MVVKVDDRRLQQDLGFVARAPRWAVAYKFPAQEASTRLEAIEWQVGRTGALTPVARLAPV 60 Query: 347 HVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPT 406 V GV+VSNATLHN DE+ RL LR GD VVI RAGDVIP+V+ + + V P Sbjct: 61 SVGGVVVSNATLHNIDEVHRLDLRAGDTVVIYRAGDVIPKVMRRLDDDGHAARAPVALPD 120 Query: 407 HCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKE 466 CPVC S V R EGE VARC+ GL C AQRKE+L+HF SRRAMD++G+G+K +D +V+ Sbjct: 121 ACPVCASAVVRPEGEVVARCSAGLFCPAQRKEALRHFASRRAMDIEGLGEKWVDLMVDAG 180 Query: 467 YVHTPADLFKLTAGKLTGLERMGPKSAQ 494 +HTPAD+++L+A +L L RM A+ Sbjct: 181 LLHTPADIYRLSAEQLLQLPRMXXXXAR 208 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 156/387 (40%), Gaps = 73/387 (18%) Query: 12 RTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFS 71 + ++ + Y+ I D EYDRL++ E P+ Sbjct: 5 KEFIKRCQEAYYQ-GMSLISDEEYDRLIKRFPLEEEIGPK-------------------G 44 Query: 72 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 131 I H M SL V+ R + KLDG A+S+LY NG V Sbjct: 45 DIPHLYRMYSLQKVY--------YGRGDKA--PFNPLGQVETDKLDGCAISLLYINGEFV 94 Query: 132 SAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRT 191 A TRG+G G D+T NV+ + IP + + + GEV + + Sbjct: 95 QALTRGNGILGNDVTHNVK-MLNIPKTISQKVPTQ---ITGEVLITKEV----------- 139 Query: 192 GGKVFANPRNAAAGSLRQLDPRITAKR----PLTFFCYGVGV-LEGGELPDTHLGRLLQF 246 N RN A+G++ D +R L F YG+ E + + +L +L Sbjct: 140 -----ENKRNYASGAINLKDSDDFIQRIGEGGLIFVAYGIQCSAETVGITEAYLKDMLWL 194 Query: 247 KKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARA 306 + + V +F+ + DG V+++N + + G+ + Sbjct: 195 ENENF---------LTVVNVRSFFKWI---------PTDGKVVRINDNNKFFREGWTNKF 236 Query: 307 PRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIER 366 PR A A K + ++T + VE+QVG +G +TPV EPV + + ATL+N D I Sbjct: 237 PRGAFAIKEDEEGEITTLVKVEWQVGASGKVTPVGYFEPVIIDDATIVKATLNNVDYINA 296 Query: 367 LGLRIGDKVVIRRAGDVIPQVVNVVLS 393 L L IG ++ + RAG VIP +V V Sbjct: 297 LDLEIGCQIRVIRAGGVIPCIVERVYD 323 >UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, similar to Thermus thermophilus SW:P26996 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVT0_MSEPV Length = 522 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 108/569 (18%), Positives = 221/569 (38%), Gaps = 85/569 (14%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 L ++ ++ Y+ I D YD+++ + K+P+ + T+++G P Sbjct: 22 LEDISEIIKILNEKYY-EGETLISDEIYDKIIEYVN---KKYPD----NDITKKIGYEPK 73 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 +++ M S + ++DE+ K+ + ++ + +K DG +S+L++ Sbjct: 74 N---KVKLPYYMGSENKIYDEDE-----KKFNNWIEKYGTSSIIVSVKADG--ISVLWDI 123 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPA--RLEVRGEVFLPQAGFEKIN 185 G TRGDG G+DI+ ++ + ++P +RGE+ + + Sbjct: 124 GK-NKLYTRGDGNYGKDISWFLKYMN--------YDLPELSDYVIRGELVINKDK----- 169 Query: 186 EDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQ 245 RN AG++ L+ + G +L + +L Q Sbjct: 170 -------------TRNDVAGAINSLEANRNEDILKEIYFVGYEILNPRFNQENQFKKLKQ 216 Query: 246 FKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVAR 305 K + S E + Y ++ +P + +DIDG+VI+ N++ G Sbjct: 217 HKIRHIKAMKYDIEDVSLECLSELYQEL---KPKMKYDIDGLVIRNNNVNDPITDG---- 269 Query: 306 APRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIE 365 P W+ A+K P T V +V +Q+ + P+A LEP+ + + + +NA + Sbjct: 270 NPPWSFAYKPPNTIYTTKVLNVIWQISKQNKYIPIAELEPIKLENKTIKRVSCYNAKFVT 329 Query: 366 RLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVAR 425 G+ V I G IP++VNV+ PV + + +G+ + Sbjct: 330 ENGIGTDAIVEIEYRGGAIPKLVNVIK----------------PVTVDESDLPDGKII-- 371 Query: 426 CTGGLICGAQRKESLKHFVSR--RAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLT 483 L KES +S+ + + + K+I+ L + ++ +L LT Sbjct: 372 -DNHLYAPIDSKESNIKIISQFFKILSIQAPNKKVIEHLYDNG----ITNIVELLKSDLT 426 Query: 484 GLERMGPKSAQNVVNALEKAK--ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAA 541 L K +N ++++ AK E + + AL I + E + Sbjct: 427 ELLDTTKKINKNALHSINIAKSIEISLPLAIAALSIPNLTEKVLEKIYNTHKDF----LT 482 Query: 542 SIEELQKVPDVGIVVASHVHNFFAEESNR 570 + ++ +K+ + + A + + + N Sbjct: 483 TKQDFEKIKGINKLSAEKIKSQILKNKNM 511 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 96/396 (24%), Positives = 174/396 (43%), Gaps = 38/396 (9%) Query: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH-PELITPDSPTQRVG 63 + +++ L T + H +Y+ P + D E+D L+ EL L P L + Sbjct: 50 QHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSPVLTQIGGGNLQHN 109 Query: 64 AAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 123 H MLSL++V + + F + ++ + K DG+A+ + Sbjct: 110 DTRQRDRQP--HRQQMLSLNSVRERTAVDKFYQ-------LHQDQQLLIQPKFDGMAIEL 160 Query: 124 LYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEK 183 +YE G+LV A++RGDG G+D+ + + A+ + P L + GE+++ Q ++ Sbjct: 161 VYEKGMLVGASSRGDGKQGKDLLALMLRSNAVNSMI---AYPYTLVIHGELYVGQQDWQ- 216 Query: 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGR 242 + + R+ AG QL P T L F + P + L Sbjct: 217 --------LRGKYVSSRHMTAGIASQLSPAQTDVMSLRFMP-----WRWIDSPYNNELMG 263 Query: 243 LLQFKKWGL----PVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQE 298 L Q G +S + + + LA Y E F +DG+V+K+ + Q Sbjct: 264 LAQLAMLGFADMSKMSHVIDRPQDIDYWLAHYQNTEA------FLLDGIVLKLANNTLQR 317 Query: 299 QLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATL 358 Q G APRWA+A KF + ++ V D+ +QVG++G +TP+ ++P+ ++G V+ + Sbjct: 318 QYGHTQHAPRWALALKFTGPKGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVTRVSG 377 Query: 359 HNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSE 394 + + + + +G +V I G+ PQ+ +V Sbjct: 378 RSQPWLLQSKIEVGSQVEIELVGNATPQLTRLVSDR 413 >UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMK7_AMEPV Length = 532 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 96/566 (16%), Positives = 213/566 (37%), Gaps = 81/566 (14%) Query: 8 LTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 67 +L ++ + Y+ +A I D +YD L+R + K+P +S +++G P Sbjct: 25 YNDLENIIQTLDNSYYDKEA-LISDKKYD-LIRNF--INNKYPN----ESLCKKIGYTPE 76 Query: 68 AAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYEN 127 ++R + M S + + + ++ + K DG++V +N Sbjct: 77 D---KVRLKYFMGSENKTYKSD------NKLLSWINEYHTNILVLSAKADGISVLWDIKN 127 Query: 128 GVLVSAATRGDGTTGEDITSNVRTIR-AIPLKLHGENI-PARLE-VRGEVFLPQAGFEKI 184 + +RGDG G+DIT + + ++ +I + VRGE+ + + Sbjct: 128 NKI---YSRGDGKYGKDITHFINYFNFSDDKNINNNDIFKNNINFVRGELVIDKPE---- 180 Query: 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLL 244 RN AG + + + + F Y + T L + Sbjct: 181 --------------NRNIVAGQINRNEIDKETALKIYFVAYEILEPRM-----TQLEQFH 221 Query: 245 QFKKWGLPVSDRVTLCESA--EEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGF 302 + + + ++ + E++ Y+ ++ L + IDG++I+ N+L + G Sbjct: 222 KLTENSIRTVKYDSVDYNISYEQLSEIYNNYTQE---LSYYIDGIIIRNNNLNPVIKSG- 277 Query: 303 VARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNAD 362 P W++ FK + +T V+++++ + + P A LEP+ + ++ HNA Sbjct: 278 ---NPPWSICFKETDKIYITTVKEIKWDISKKNIYIPKAILEPIIIDNSTINAVACHNAK 334 Query: 363 EIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEA 422 + + G V I + G VIP + NV+ E + + + V + Sbjct: 335 YVIDKKINTGSIVEIVKKGGVIPIINNVIKESDIEIILPDGILSGVNIIFTGVNKESE-- 392 Query: 423 VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKL 482 + + +F ++ + IID+L YV+ + K + Sbjct: 393 --------------IKRILYFF--KSFGYKNINKTIIDKLYMLGYVN----ILKYLEKDI 432 Query: 483 TGLERMGPKSAQNVVNALE--KAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 E K+ ++ ++ K+K L AL + + ++ + F L+ Sbjct: 433 NIEEYNNKKTYIKLLEVIKDIKSKNYNIVDILTALSLDSISKSRVCAIYNEFPDF--LKD 490 Query: 541 ASIEELQKVPDVGIVVASHVHNFFAE 566 + ++ + +G ++ +++ Sbjct: 491 KNEKDYSSINGIGKSISKKINDNIIN 516 >UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R767_PLAYO Length = 354 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 93/170 (54%), Positives = 124/170 (72%), Gaps = 1/170 (0%) Query: 3 SIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 62 + ++ +LR + H Y+ +D P I DAEYDRLM EL +E ++PEL+TPDSPTQRV Sbjct: 186 EVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRV 245 Query: 63 GAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVS 122 GA P+ AF+++RHEVPMLSL+N F EE AF++RV+ L + + + + E KLDGLAV+ Sbjct: 246 GAPPVEAFTEVRHEVPMLSLENAFSEEDLTAFDRRVRKEL-SRDTLEYVAEPKLDGLAVN 304 Query: 123 ILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRG 172 +LY++GVLV AATRGDG GED+T NVR +RAIPL+L GE+ P R E G Sbjct: 305 LLYQDGVLVRAATRGDGEVGEDVTHNVRAVRAIPLRLKGEDFPDRFEGAG 354 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.152 0.467 Lambda K H 0.267 0.0466 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,556,456,065 Number of Sequences: 3077464 Number of extensions: 235192768 Number of successful extensions: 633541 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1530 Number of HSP's successfully gapped in prelim test: 433 Number of HSP's that attempted gapping in prelim test: 625494 Number of HSP's gapped (non-prelim): 2865 length of query: 671 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 535 effective length of database: 621,861,252 effective search space: 332695769820 effective search space used: 332695769820 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (41.8 bits)