98 d1k8qa_ Probab=99.24   E-value=2.6e-09  Score=77.91  Aligned_columns=233  Identities=16%

Q ss_pred             CCCCCCCEEEECCCCCCHHHH------HHHHHHC-CCCCEEEEEECCC-----------CCCCCCCCCCHHHH----HHH
Q ss_conf             278877289989887764889------9999733-7897199985778-----------88876451798999----999
Q batch____      1061 REGNGPTLFCFHPASGFAWQF------SVLSRYL-DPQWSIIGIQSPR-----------PNGPMQTAANLDEV----CEA 1118 (1293)
Q Consensus      1061 ~~g~~~~lf~~h~~~G~~~~y------~~L~~~l-~~~~~vygl~~p~-----------~~~~~~~~~~i~~~----a~~ 1118 (1293)
                      +.+.+||++|+|+.+++...|      ..|+..| ...+.||.+..+|           ....+....++.++    ...
T Consensus        54 ~~~~~p~vlllHG~~~~~~~~~~~~~~~~la~~l~~~Gy~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~  133 (377)
T d1k8qa_          54 NIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPA  133 (377)
T ss_dssp             TTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH
T ss_conf             56788759999978789778640342010689999779879993778899998887888882877424889989988999


Q ss_pred             HHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHH--------
Q ss_conf             999999968999899992573889999999999988898779999838898766677201221048999997--------
Q batch____      1119 HLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEI-------- 1190 (1293)
Q Consensus      1119 y~~~i~~~~p~gpy~l~G~S~Gg~iA~e~A~~L~~~G~~v~~l~llD~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1190 (1293)
                      .++.|+...+..+++|+|||+||++|+..|.+--+.-..+..++++.+........................        
T Consensus       134 ~i~~i~~~~g~~ki~lvGHS~Gg~ia~~~a~~~P~~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (377)
T d1k8qa_         134 TIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFY  213 (377)
T ss_dssp             HHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEES
T ss_pred             HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCC
T ss_conf             99999996799819999745457999999996866211212211103444665322013332013246776521210002


Q ss_pred             ---------------------------------------HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC----
Q ss_conf             ---------------------------------------7778886311345689899999999999999998617----
Q batch____      1191 ---------------------------------------NREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTA---- 1227 (1293)
Q Consensus      1191 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 1227 (1293)
                                                             ...................+................+    
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (377)
T d1k8qa_         214 PHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPV  293 (377)
T ss_dssp             CCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHH
T ss_pred             CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             30589998864014421110345555554204773337999999876310366518999999998404411333211344


Q ss_pred             --------------CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCC-CEEEEECC-CHHH-HCCCHHHHHHHHHHHHH
Q ss_conf             --------------8863021079997078777657703316864498-28999059-8778-72927899999999998
Q batch____      1228 --------------HSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE-LDIYRQDC-AHVD-IISPGTFEKIGPIIRAT 1290 (1293)
Q Consensus      1228 --------------~~~~~~~~~~~~~a~~~~~~~~~~~~~W~~~~~~-~~~~~v~g-~H~~-~l~~~~~~~~a~~i~~~ 1290 (1293)
                                    ....+..|++++.++++............+..++ ++.+.+++ .|+. ++....-+.+.+.|.+.
T Consensus       294 ~~~~~~~~~~~~~~~l~~i~vPvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~l~~~~~~~~v~~~i~~f  373 (377)
T d1k8qa_         294 QNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSM  373 (377)
T ss_dssp             HHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCEECHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             56665166675202576289988999957883137999999999789972999978898400110332079999999998


Q ss_pred             HCC
Q ss_conf             369
Q batch____      1291 LNR 1293 (1293)
Q Consensus      1291 l~r 1293 (1293)
                      |+.
T Consensus       374 L~~  376 (377)
T d1k8qa_         374 MGT  376 (377)
T ss_dssp             HHT
T ss_pred             HCC
T ss_conf             615