254 c1ycdA_ Probab=97.16   E-value=0.015  Score=33.36  Aligned_columns=189  Identities=14%

Q ss_pred             CCEEEECCCCCCHHHHHH----HHHHC-CCCCEEEEEECCCCCCCCCCCC-----------------------------C
Q ss_conf             728998988776488999----99733-7897199985778888764517-----------------------------9
Q batch____      1066 PTLFCFHPASGFAWQFSV----LSRYL-DPQWSIIGIQSPRPNGPMQTAA-----------------------------N 1111 (1293)
Q Consensus      1066 ~~lf~~h~~~G~~~~y~~----L~~~l-~~~~~vygl~~p~~~~~~~~~~-----------------------------~ 1111 (1293)
                      |.++|+|+.+++...|..    |++.| ...+.|+.+.+|+.........                             .
T Consensus         4 P~vL~lHG~~~s~~~~~~~~~~l~~~l~~~g~~vv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (237)
T c1ycdA_           4 PKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHELD   83 (237)
T ss_dssp             CEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGGCC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf             88999858999989999999999999972997899940882367765655466133555310011112256766210676


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHC---CCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHH
Q ss_conf             8999999999999968999899992573889999999999988---8987799998388987666772012210489999
Q batch____      1112 LDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRAR---GEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLA 1188 (1293)
Q Consensus      1112 i~~~a~~y~~~i~~~~p~gpy~l~G~S~Gg~iA~e~A~~L~~~---G~~v~~l~llD~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1293)
                      +........+......+.  ..+.|+|.||..+..++......   +-...+.+......+...................
T Consensus        84 ~~~~~~~~~~~~~~~~~~--~~i~G~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
T c1ycdA_          84 ISEGLKSVVDHIKANGPY--DGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRD  161 (237)
T ss_dssp             CHHHHHHHHHHHHHHCCC--SEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTSTTCEEECGGGTT
T ss_pred             HHHHHHHHHHHHCCCCCC--EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             999999999850543671--499850444027999998432222444445324203333445300023222124442112


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHC--------C
Q ss_conf             97777888631134568989999999999999999861788630210799970787776577033168644--------9
Q batch____      1189 EINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI--------A 1260 (1293)
Q Consensus      1189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~W~~~~--------~ 1260 (1293)
                      ....                                    ......|++++-.+++..-.......+-+.+        .
T Consensus       162 ~~~~------------------------------------~~~~~~P~l~i~G~~D~~vp~~~~~~l~~~~~~~~~~~~~  205 (237)
T c1ycdA_         162 SFAV------------------------------------KPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKE  205 (237)
T ss_dssp             TTCC------------------------------------CTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTT
T ss_pred             HHHH------------------------------------CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             2211------------------------------------0047998899964689877889999999999861777777


Q ss_pred             CCEEEEECCCHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             82899905987787292789999999999836
Q batch____      1261 ELDIYRQDCAHVDIISPGTFEKIGPIIRATLN 1292 (1293)
Q Consensus      1261 ~~~~~~v~g~H~~~l~~~~~~~~a~~i~~~l~ 1292 (1293)
                      ...++.-.|.|.---.++.++++.+.|++.|+
T Consensus       206 ~~~~~~~~~GH~vp~~~~~~~~i~~fl~~~L~  237 (237)
T c1ycdA_         206 KVLAYEHPGGHMVPNKKDIIRPIVEQITSSLQ  237 (237)
T ss_dssp             TEEEEEESSSSSCCCCHHHHHHHHHHHHHHHC
T ss_pred             EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             46999838898546898999999999998609