 |
| Job Description | P39379 | | Confidence | 2.92% | Date | Thu Jan 5 12:00:11 GMT 2012 |
| Rank | 8 | Aligned Residues | 29 |
| % Identity | 21% | Template | d2foka2 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Restriction endonuclease FokI, N-terminal (recognition) domain
|
| Resolution | 2.30 |
|
|   |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | I | A | N | L | Q | N | T | D | A | A | A | G | M | T | K | E | L | A | Q | E | G | E | I | T | E | R | D | K |
| Query Conservation |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|
| Template Sequence |   |
L | I | E | A | I | S | S | Y | P | P | A | I | R | I | L | T | L | L | E | D | G | Q | H | L | T | K | F | D | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|