Phyre 2 alignment of Q47208 with c3rggD_

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Job Description | Q47208
Confidence | 47.95% | Date | Thu Jan 5 12:36:39 GMT 2012
Rank | 233 | Aligned Residues | 31
% Identity | 16% | Template | c3rggD_
PDB info | PDB header:lyase | Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; | PDBTitle: crystal structure of treponema denticola pure bound to air
Resolution | 1.82 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | Y | A | I | A | T | V | T | G | T | E | R | D | P | Q | C | R | S | Q | Q | I | A | T | L | E | D | A | G | I | A | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | P | L | V | I | I | L | M | G | S | S | S | D | M | G | H | A | E | K | I | A | S | E | L | K | T | F | G | I | E | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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