15/01/2012 18:00:30 : INFO  : Run start: Sun Jan 15 18:00:30 GMT 2012
15/01/2012 18:00:32 : INFO  : Initialised job
15/01/2012 18:00:32 : INFO  : Renaming log file 'phyre2_20120115_180030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/19fc8736bea991d9/phyre_20120115_180030.log'
15/01/2012 18:00:33 : INFO  : Initialised job:
Sequence
>batch____
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNAT
PNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANL
ALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMI
AGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISA
LTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVW
FASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADD
THQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIG
FGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVS
SLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPV
AGGNKKLARLLERLQ

15/01/2012 18:00:33 : INFO  : Checked sequence
15/01/2012 18:00:36 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 18:00:37 : INFO  : PSI-BLAST 3 iterations
15/01/2012 18:02:58 : INFO  : PSI-BLAST 5 iterations
15/01/2012 18:06:04 : INFO  : Finished PSI-BLAST
15/01/2012 18:06:04 : INFO  : Running Buildali to generate a3m file
15/01/2012 18:13:22 : INFO  : Converting to HMM
15/01/2012 18:13:25 : INFO  : Calibrating HMM
15/01/2012 18:13:43 : INFO  : Searching HMM database
15/01/2012 18:24:02 : INFO  : Finished buildali
15/01/2012 18:24:04 : INFO  : Predicting secondary structure
15/01/2012 18:24:15 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 18:24:17 : INFO  : Predicting Disordered regions
15/01/2012 18:24:22 : INFO  : Predicted Disorder (Disopred)
15/01/2012 18:24:24 : INFO  : Running memsat_svm check
15/01/2012 18:26:55 : INFO  : Globular protein
15/01/2012 18:26:56 : INFO  : Predicted Transmembrane (memsat_svm) ID '19fc8736bea991d9'
15/01/2012 18:26:58 : INFO  : Initialising fold library search
15/01/2012 18:27:01 : INFO  : Initialised search input
15/01/2012 18:27:04 : INFO  : Building Ensemble models
15/01/2012 18:27:08 : INFO  : Building hh.c3dmyA_.model.1.pdb
15/01/2012 18:27:26 : INFO  : Building hh.c2duwA_.model.2.pdb
15/01/2012 18:27:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/19fc8736bea991d9/hh.c2duwA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/19fc8736bea991d9/c2duwA_.16.pdb
15/01/2012 18:27:44 : INFO  : Building hh.c3n0lA_.model.3.pdb
15/01/2012 18:27:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/19fc8736bea991d9/hh.c3n0lA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/19fc8736bea991d9/c3n0lA_.162.pdb
15/01/2012 18:27:57 : INFO  : Building c3dmyA_.1.pdb
15/01/2012 18:28:09 : INFO  : Building c2csuB_.2.pdb
15/01/2012 18:28:21 : INFO  : Building c3mwdB_.3.pdb
15/01/2012 18:28:34 : INFO  : Building c2nu8D_.4.pdb
15/01/2012 18:28:46 : INFO  : Building c2fpgA_.5.pdb
15/01/2012 18:28:59 : INFO  : Building c2yv2A_.6.pdb
15/01/2012 18:29:15 : INFO  : Building c2yv1A_.7.pdb
15/01/2012 18:29:32 : INFO  : Building c1oi7A_.8.pdb
15/01/2012 18:29:46 : INFO  : Building d1euca2.9.pdb
15/01/2012 18:30:00 : INFO  : Building d2nu7a2.10.pdb
15/01/2012 18:30:15 : INFO  : Building d1oi7a2.11.pdb
15/01/2012 18:30:30 : INFO  : Building d2csua2.12.pdb
15/01/2012 18:30:44 : INFO  : Building d2csua3.13.pdb
15/01/2012 18:30:58 : INFO  : Building d2nu7b1.14.pdb
15/01/2012 18:31:11 : INFO  : Building d1eucb1.15.pdb
15/01/2012 18:31:25 : INFO  : Building c2duwA_.16.pdb
15/01/2012 18:31:39 : INFO  : Building d2csua1.17.pdb
15/01/2012 18:31:54 : INFO  : Building c2nu9E_.18.pdb
15/01/2012 18:32:09 : INFO  : Building d1iuka_.19.pdb
15/01/2012 18:32:22 : INFO  : Building d1y81a1.20.pdb
15/01/2012 18:33:17 : INFO  : Finished HH model building
15/01/2012 18:33:19 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 18:34:23 : INFO  : html domain output complete ID '19fc8736bea991d9'
15/01/2012 19:42:46 : INFO  : Run end  : Sun Jan 15 19:42:45 GMT 2012
