Phyre 2 alignment of P13960 with d1m5ha2

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Job Description | P13960
Confidence | 3.62% | Date | Thu Jan 5 11:33:48 GMT 2012
Rank | 27 | Aligned Residues | 25
% Identity | 24% | Template | d1m5ha2
SCOP info | Ferredoxin-like | Formylmethanofuran:tetrahydromethanopterin formyltransferase | Formylmethanofuran:tetrahydromethanopterin formyltransferase
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 12 | . | . | . | . | . | . | . | 20 |  | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | 30 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | G | I | E | S | D | L | H | I | . | D | S | S | K | Y | P | . | . | . | . | . | . | . | H | P | F | C | S | L | L | Q | K | R
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | G | I | V | A | S | G | S | K | V | G | A | N | K | Y | K | F | L | K | A | S | T | N | E | K | F | A | P | S | I | R | D | Q
Template Known Secondary structure |  | G | G |  | B | S | S |  |  | B | S | S |  | S | S |  | T | T |  | S |  | B |  |  | G | G | G |  | G | G | G |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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