BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (79 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0TH06 Uncharacterized protein yobH n=123 Tax=Enterobac... 159 4e-38 UniRef50_UPI0001C3420E hypothetical protein EcanA3_07089 n=1 Tax... 122 5e-27 UniRef50_D0Z888 Putative uncharacterized protein n=2 Tax=Edwards... 67 2e-10 UniRef50_UPI0001C349E2 hypothetical protein PretD1_03519 n=1 Tax... 44 0.002 >UniRef50_Q0TH06 Uncharacterized protein yobH n=123 Tax=Enterobacteriaceae RepID=YOBH_ECOL5 Length = 79 Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 79/79 (100%), Positives = 79/79 (100%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF Sbjct: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 Query: 61 LGITDCPLLRKSNIVVDNG 79 LGITDCPLLRKSNIVVDNG Sbjct: 61 LGITDCPLLRKSNIVVDNG 79 >UniRef50_UPI0001C3420E hypothetical protein EcanA3_07089 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3420E Length = 99 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 53/79 (67%), Positives = 70/79 (88%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 M FIIRT + +A+VWIGLLL+GYGVL+GS ENAAGLG+QC Y+TA+G ST QYLH+ SG Sbjct: 21 MHFIIRTTIALAVVWIGLLLTGYGVLVGSTENAAGLGIQCKYVTAQGMSTAQYLHSDSGI 80 Query: 61 LGITDCPLLRKSNIVVDNG 79 +G+T+CP+LRK+++V+DNG Sbjct: 81 IGLTNCPVLRKTSVVIDNG 99 >UniRef50_D0Z888 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z888_EDWTE Length = 78 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 48/70 (68%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 MR + T++L+ ++++ +L SGYG LI S++N GLGLQC YLTAR T +H +G Sbjct: 1 MRLLKTTLILLIVIYLAMLFSGYGFLISSRKNLGGLGLQCQYLTARSLVTQTQIHDSNGV 60 Query: 61 LGITDCPLLR 70 +GI +CPL + Sbjct: 61 IGIAECPLFK 70 >UniRef50_UPI0001C349E2 hypothetical protein PretD1_03519 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C349E2 Length = 69 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 1 MRFIIRTV-MLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSG 59 M+ I +V +++ALV I + + YG+ S++ L+C YL A+GT T Y ++++G Sbjct: 1 MKLIKTSVFIMVALVVISFI-TRYGINYSSEK--INSELKCNYLWAKGTFTTDYFYSENG 57 Query: 60 FLGITDCPLLRK 71 +G+ +CP++ K Sbjct: 58 IMGVRNCPIIGK 69 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_UPI0001C3420E hypothetical protein EcanA3_07089 n=1 Tax... 109 3e-23 UniRef50_Q0TH06 Uncharacterized protein yobH n=123 Tax=Enterobac... 106 2e-22 UniRef50_D0Z888 Putative uncharacterized protein n=2 Tax=Edwards... 80 2e-14 UniRef50_UPI0001C349E2 hypothetical protein PretD1_03519 n=1 Tax... 77 2e-13 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_UPI0001C3420E hypothetical protein EcanA3_07089 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3420E Length = 99 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 53/79 (67%), Positives = 70/79 (88%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 M FIIRT + +A+VWIGLLL+GYGVL+GS ENAAGLG+QC Y+TA+G ST QYLH+ SG Sbjct: 21 MHFIIRTTIALAVVWIGLLLTGYGVLVGSTENAAGLGIQCKYVTAQGMSTAQYLHSDSGI 80 Query: 61 LGITDCPLLRKSNIVVDNG 79 +G+T+CP+LRK+++V+DNG Sbjct: 81 IGLTNCPVLRKTSVVIDNG 99 >UniRef50_Q0TH06 Uncharacterized protein yobH n=123 Tax=Enterobacteriaceae RepID=YOBH_ECOL5 Length = 79 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 79/79 (100%), Positives = 79/79 (100%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF Sbjct: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 Query: 61 LGITDCPLLRKSNIVVDNG 79 LGITDCPLLRKSNIVVDNG Sbjct: 61 LGITDCPLLRKSNIVVDNG 79 >UniRef50_D0Z888 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z888_EDWTE Length = 78 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 49/73 (67%) Query: 1 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF 60 MR + T++L+ ++++ +L SGYG LI S++N GLGLQC YLTAR T +H +G Sbjct: 1 MRLLKTTLILLIVIYLAMLFSGYGFLISSRKNLGGLGLQCQYLTARSLVTQTQIHDSNGV 60 Query: 61 LGITDCPLLRKSN 73 +GI +CPL + + Sbjct: 61 IGIAECPLFKAIS 73 >UniRef50_UPI0001C349E2 hypothetical protein PretD1_03519 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C349E2 Length = 69 Score = 76.9 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 1 MRFIIRTV-MLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSG 59 M+ I +V +++ALV I + + YG+ S++ L+C YL A+GT T Y ++++G Sbjct: 1 MKLIKTSVFIMVALVVISFI-TRYGINYSSEK--INSELKCNYLWAKGTFTTDYFYSENG 57 Query: 60 FLGITDCPLLRK 71 +G+ +CP++ K Sbjct: 58 IMGVRNCPIIGK 69 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.326 0.145 0.396 Lambda K H 0.267 0.0445 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 291,768,316 Number of Sequences: 3077464 Number of extensions: 9428459 Number of successful extensions: 30548 Number of sequences better than 1.0e-01: 5 Number of HSP's better than 0.1 without gapping: 8 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 30539 Number of HSP's gapped (non-prelim): 9 length of query: 79 length of database: 1,040,396,356 effective HSP length: 50 effective length of query: 29 effective length of database: 886,523,156 effective search space: 25709171524 effective search space used: 25709171524 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 87 (38.0 bits)