BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (185 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax... 379 e-104 UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi... 197 1e-49 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 146 3e-34 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 126 3e-28 UniRef50_Q1QCJ7 Cupin 2, conserved barrel n=1 Tax=Psychrobacter ... 117 2e-25 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 115 6e-25 UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin... 115 9e-25 UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin... 114 1e-24 UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin... 112 6e-24 UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P... 112 7e-24 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 110 2e-23 UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Mari... 110 2e-23 UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh... 106 3e-22 UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein... 100 3e-20 UniRef50_C5BTI6 DNA-binding protein n=1 Tax=Teredinibacter turne... 96 7e-19 UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De... 95 1e-18 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 93 3e-18 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 91 2e-17 UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti... 91 3e-17 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 90 3e-17 UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella ... 90 4e-17 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 86 5e-16 UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni... 83 5e-15 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 82 7e-15 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 82 9e-15 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 82 1e-14 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 82 1e-14 UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C... 81 1e-14 UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ... 80 3e-14 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 79 5e-14 UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob... 79 5e-14 UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost... 79 8e-14 UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag... 79 1e-13 UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin... 78 1e-13 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 77 2e-13 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 77 2e-13 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 77 3e-13 UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B... 77 3e-13 UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P... 77 3e-13 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 76 5e-13 UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi... 76 5e-13 UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ... 75 7e-13 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 75 1e-12 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 75 1e-12 UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I1... 75 1e-12 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 74 2e-12 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 74 3e-12 UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni... 74 3e-12 UniRef50_B3PEW6 Aldehyde dehydrogenase n=1 Tax=Cellvibrio japoni... 74 3e-12 UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax... 74 3e-12 UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl... 73 4e-12 UniRef50_UPI00016AD0EC putative transcriptional regulator, XRE f... 73 4e-12 UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvima... 73 4e-12 UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th... 73 4e-12 UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De... 72 8e-12 UniRef50_C1DA81 Probable transcriptional regulator n=1 Tax=Larib... 72 1e-11 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 72 1e-11 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 72 1e-11 UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin... 72 1e-11 UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chlorofl... 71 2e-11 UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7... 71 2e-11 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 71 2e-11 UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax... 70 3e-11 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 70 3e-11 UniRef50_Q21KB3 Putative uncharacterized protein n=1 Tax=Sacchar... 70 3e-11 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 70 4e-11 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 70 4e-11 UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C... 69 5e-11 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 69 6e-11 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 69 6e-11 UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th... 69 6e-11 UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin... 69 8e-11 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 69 1e-10 UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax... 68 1e-10 UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean... 68 1e-10 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 68 1e-10 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 67 3e-10 UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa... 66 7e-10 UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F... 65 8e-10 UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De... 65 1e-09 UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1... 65 1e-09 UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostri... 65 1e-09 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 65 1e-09 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 64 2e-09 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 64 2e-09 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 64 2e-09 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 64 2e-09 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 64 2e-09 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 64 3e-09 UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga... 64 3e-09 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 64 4e-09 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 63 4e-09 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 63 4e-09 UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax... 63 5e-09 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 63 5e-09 UniRef50_C6E2Z8 Phosphate butyryltransferase n=2 Tax=Geobacter R... 63 6e-09 UniRef50_B9MNZ2 Transcriptional regulator, XRE family n=1 Tax=An... 62 7e-09 UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter... 62 7e-09 UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID... 62 8e-09 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 62 8e-09 UniRef50_A0LTQ7 Transcriptional regulator, XRE family with cupin... 62 9e-09 UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=... 62 1e-08 UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F... 62 1e-08 UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin... 62 1e-08 UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo... 61 2e-08 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 61 2e-08 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 61 2e-08 UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri... 61 2e-08 UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin... 61 2e-08 UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria... 61 2e-08 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 61 2e-08 UniRef50_B5JDI3 Helix-turn-helix domain protein n=1 Tax=Verrucom... 61 2e-08 UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa... 60 3e-08 UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jo... 60 3e-08 UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba... 60 4e-08 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 60 4e-08 UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa... 60 4e-08 UniRef50_B5H6V8 Transcriptional regulator n=1 Tax=Streptomyces p... 60 5e-08 UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca... 59 6e-08 UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De... 59 6e-08 UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S... 59 7e-08 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 59 1e-07 UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma... 58 1e-07 UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr... 58 1e-07 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 58 1e-07 UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus... 58 2e-07 UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Maripro... 58 2e-07 UniRef50_B5YHQ3 Helix-turn-helix domain protein n=1 Tax=Thermode... 58 2e-07 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 57 2e-07 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 57 2e-07 UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De... 57 3e-07 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 57 3e-07 UniRef50_Q2RLS1 Transcriptional regulator, XRE family n=1 Tax=Mo... 57 4e-07 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 57 4e-07 UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu... 57 4e-07 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 57 4e-07 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 57 4e-07 UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord... 56 5e-07 UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi... 56 5e-07 UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B... 56 5e-07 UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax... 56 5e-07 UniRef50_D2S780 Transcriptional regulator, XRE family n=2 Tax=Ba... 56 6e-07 UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo... 56 6e-07 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 56 6e-07 UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi... 56 7e-07 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 56 7e-07 UniRef50_A8LCT7 Transcriptional regulator, XRE family n=22 Tax=A... 56 7e-07 UniRef50_UPI0001B4F46F transcriptional regulator n=1 Tax=Strepto... 55 8e-07 UniRef50_A4F638 Transcriptional regulator, Cro/CI family n=1 Tax... 55 9e-07 UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid... 55 9e-07 UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot... 55 9e-07 UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus D... 55 1e-06 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 55 1e-06 UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do... 55 1e-06 UniRef50_C9XPQ5 Putative transcriptional regulator (Putative unc... 55 1e-06 UniRef50_D1PQA9 Toxin-antitoxin system, antitoxin component, Xre... 55 2e-06 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 55 2e-06 UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin... 54 2e-06 UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac... 54 2e-06 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 54 2e-06 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 54 2e-06 UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Th... 54 2e-06 UniRef50_C7Q0I6 Transcriptional regulator, XRE family n=1 Tax=Ca... 54 2e-06 UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro... 54 2e-06 UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin... 54 2e-06 UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ... 54 2e-06 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 54 2e-06 UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc... 54 2e-06 UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammapr... 54 3e-06 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 54 3e-06 UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=De... 54 3e-06 UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=De... 54 3e-06 UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Fla... 54 3e-06 UniRef50_Q9RVJ9 Epoxidase, putative n=1 Tax=Deinococcus radiodur... 53 4e-06 UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=F... 53 4e-06 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 53 4e-06 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 53 4e-06 UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=... 53 4e-06 UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri... 53 5e-06 UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R... 53 6e-06 UniRef50_B9MNH1 Transcriptional regulator, XRE family n=1 Tax=An... 53 6e-06 UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 ... 52 6e-06 UniRef50_UPI0001C376DB transcriptional regulator, XRE family pro... 52 7e-06 UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator... 52 7e-06 UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh... 52 7e-06 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 52 7e-06 UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Pa... 52 8e-06 UniRef50_Q2CGQ2 Probable transcriptional regulator n=1 Tax=Ocean... 52 9e-06 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 52 9e-06 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 52 1e-05 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 52 1e-05 UniRef50_A4J2V8 Helix-turn-helix domain protein n=3 Tax=Desulfot... 52 1e-05 UniRef50_A4J2X4 Putative transcriptional regulator, XRE family n... 52 1e-05 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 52 1e-05 UniRef50_D1C7G3 Putative uncharacterized protein n=1 Tax=Sphaero... 52 1e-05 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 52 1e-05 UniRef50_C9XR68 Putative phage DNA-binding protein n=6 Tax=Clost... 52 1e-05 UniRef50_Q2RI10 Transcriptional regulator, XRE family n=1 Tax=Mo... 51 2e-05 UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coproco... 51 2e-05 UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin... 51 2e-05 UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B... 51 2e-05 UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp... 51 2e-05 UniRef50_B9MNH2 Transcriptional regulator, XRE family n=1 Tax=An... 51 2e-05 UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B... 50 3e-05 UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac... 50 3e-05 UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=... 50 3e-05 UniRef50_A5V678 Transcriptional regulator, XRE family n=1 Tax=Sp... 50 3e-05 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 50 3e-05 UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseud... 50 3e-05 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 50 3e-05 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 50 3e-05 UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang... 50 3e-05 UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=De... 50 3e-05 UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri... 50 4e-05 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 50 4e-05 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 50 4e-05 UniRef50_A4XJD0 Transcriptional regulator, XRE family n=1 Tax=Ca... 50 4e-05 UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Ac... 50 4e-05 UniRef50_C5CT85 Transcriptional regulator, XRE family n=1 Tax=Va... 50 4e-05 UniRef50_Q0K2B1 Putative uncharacterized protein h16_B1072 n=1 T... 50 5e-05 UniRef50_C6WEH6 Cupin 2 conserved barrel domain protein n=3 Tax=... 50 5e-05 UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Ga... 50 5e-05 UniRef50_Q1AYH0 Transcriptional regulator, XRE family n=1 Tax=Ru... 50 5e-05 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 50 5e-05 UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Ta... 50 5e-05 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 49 5e-05 UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=... 49 6e-05 UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin... 49 7e-05 UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=... 49 9e-05 UniRef50_Q1GEM6 Transcriptional regulator, XRE family with cupin... 49 9e-05 UniRef50_A7K1Q3 Predicted transcriptional regulator n=1 Tax=Vibr... 49 1e-04 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 49 1e-04 UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin... 49 1e-04 UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=B... 49 1e-04 UniRef50_A7AYS6 Putative uncharacterized protein n=2 Tax=Ruminoc... 49 1e-04 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 48 1e-04 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 48 1e-04 UniRef50_C1TKU3 SOS response transcriptional repressor, RecA-med... 48 1e-04 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 48 1e-04 UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac... 48 1e-04 UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B... 48 1e-04 UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein... 48 1e-04 UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales ... 48 2e-04 UniRef50_C7LUL3 Helix-turn-helix domain protein n=1 Tax=Desulfom... 48 2e-04 UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 48 2e-04 UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A... 48 2e-04 UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba... 48 2e-04 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 48 2e-04 UniRef50_D1WPC0 DNA-binding protein n=1 Tax=Staphylococcus epide... 48 2e-04 UniRef50_B9MPV1 Transcriptional regulator, XRE family n=2 Tax=Cl... 48 2e-04 >UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax=Gammaproteobacteria RepID=PUUR_ECOLI Length = 185 Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG Sbjct: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT Sbjct: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 Query: 181 TPTTF 185 TPTTF Sbjct: 181 TPTTF 185 >UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio RepID=A6CYI2_9VIBR Length = 185 Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK ++++R+++GLSQR AE +G+THSAIS+IE KVSP++S+LQK++ V+ LSLSEFF+ Sbjct: 7 GKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSLSEFFT 66 Query: 69 -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126 E ++ E +VV+ +DLIE+GS+ VSMKLV+NG+ + + + E Y P +TTG IKH Sbjct: 67 LEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGASNIKH 126 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE+GTVL GE+ L NG+ Y + AG+SY I+T IPH F+N S CR+ISAHTP F Sbjct: 127 EGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHTPKAF 185 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 2/179 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L +R+ +GLSQR A+ +G+T+S IS IE++ VSP++S+L+K+L +SL +FFS Sbjct: 30 GASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLVDFFS 89 Query: 69 -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-IKH 126 E E +VV D+L+++G+ + KL+ PNR ++++ ETY PG+ TGE +KH Sbjct: 90 IEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEEMLKH 149 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE V+EG+ LT+ + Y L AG SY N+ +PH F N CR++SA TP F Sbjct: 150 EGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTPANF 208 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 2/179 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R+ LSQR A SG+T++ IS IEQ++VSP+IS+L+KLL+ ++L++FF+ Sbjct: 25 GARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLADFFT 84 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER--IKH 126 + P + Q V D ++G GV + LV P+R + + E Y PG +GE + Sbjct: 85 FDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPIVHS 144 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G V G + LTI+GQ L G Y T +PH F N IIS++TP F Sbjct: 145 EGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPANF 203 >UniRef50_Q1QCJ7 Cupin 2, conserved barrel n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCJ7_PSYCK Length = 132 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 2/128 (1%) Query: 60 GLSLSEFFSEPEKPDEPQVVINQDDLIEMG--SQGVSMKLVHNGNPNRTLAMIFETYQPG 117 L L+ FFS+ K + +VV+ DLIE+ S VS+K V+N + + L + ETYQP Sbjct: 5 ALYLTTFFSDEWKEPKARVVVTPKDLIELSEPSSRVSLKQVYNCSTTKNLGFLIETYQPN 64 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++T E+I H+GEEIGTV+EG++++ I Y L SY I+T PH+F N + G+ RII Sbjct: 65 SSTEEKIAHEGEEIGTVIEGKVLIRIEETTYLLNEDDSYVIDTIKPHTFINPTDGVTRII 124 Query: 178 SAHTPTTF 185 SAHTPTT+ Sbjct: 125 SAHTPTTY 132 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 4/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R +R++ GLSQR A+ +G+T+ IS IE + VSP++++L KLL S++EFF+ Sbjct: 6 GPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEFFA 65 Query: 69 EPE-KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126 E KPD Q + E+G +S + + + + +R + M+ ET PG TG E + H Sbjct: 66 VDEPKPD--QFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLAH 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +G+E G +++GE+ LT++ + L G SY ++ H F NTS C I+SA++P +F Sbjct: 124 EGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182 >UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Sagittula stellata E-37 RepID=A3JX32_9RHOB Length = 174 Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 9/174 (5%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 +SQR A +GLT SAIS IEQ+K SP++++L++LL ++LSEFFS E+ P+ Sbjct: 1 MSQRDLAGRAGLTSSAISLIEQNKSSPSVASLKRLLDAIPMNLSEFFSVVEQRKTPKYFY 60 Query: 81 NQDDLIEMGSQGVSM-------KLVHNGNPNR-TLAMIFETYQPGTTTG-ERIKHQGEEI 131 D+ IE+ Q + + L G+ +R +L ++ ETY G+ TG E ++H+GEE Sbjct: 61 APDEYIELSPQDIGLGVGAARVSLRQLGDASRHSLQVLHETYPAGSDTGPELLRHEGEEA 120 Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G V+ G I +T+ Q L G Y ++ +PH F N S C +ISA TP TF Sbjct: 121 GIVVSGLIEVTVADQIRVLNPGDGYLFSSQLPHRFRNISDAPCVVISACTPPTF 174 >UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=Q1GM81_SILST Length = 190 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 6/186 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +DE L P RL +R++ LSQR A+ +G+ +S IS IE K++P++ L+++L + Sbjct: 9 ADEDLGP--RLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPI 66 Query: 62 SLSEFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 SLS+FF+ EPE E +DL E+G VS+K V R + +++ETY+ G T Sbjct: 67 SLSDFFAFEPET--EKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADT 124 Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + H+GEE G VL G I +T+ Q L G +Y ++ PH F C ++SA Sbjct: 125 GRVMYGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSA 184 Query: 180 HTPTTF 185 TP TF Sbjct: 185 CTPPTF 190 >UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=C3MAN4_RHISN Length = 220 Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 4/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R LSQR A+ +G+T+S IS IE + +P++ L+++L + L+EFFS Sbjct: 44 GNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLAEFFS 103 Query: 69 -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKH 126 EPE+P + ++L+E+G +S + + + R+L ++ E YQPG TG+ + H Sbjct: 104 FEPERPR--KAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVLLVH 161 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G VL G + +T++ + L G +Y + PH F C +ISA TP TF Sbjct: 162 EGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPPTF 220 >UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria RepID=B1M0W6_METRJ Length = 186 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 8/183 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R + GLSQR A+ +G+T+SAIS IE ++V+P++ L+++L + ++EFF+ Sbjct: 6 GARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMAEFFA 65 Query: 69 -EPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTGE- 122 EPE E + ++L E+G + +S + V + R L ++ E Y+PG TG Sbjct: 66 LEPEP--ERKAFFAAEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADTGRV 123 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H+GEE G VL G + +T++ + L G +Y+ ++ PH F C ++SA TP Sbjct: 124 PLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSACTP 183 Query: 183 TTF 185 +F Sbjct: 184 PSF 186 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 11/184 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL E+R +SQR+ AE SG+ H +S IE + SP++++L+K+L G+++SEFF Sbjct: 28 GARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLGVTMSEFF- 86 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVS--------MKLVHNGNPN-RTLAMIFETYQPGTT 119 EP+ P PQ +L ++ S+ S M L G+ L ++ E Y+PG Sbjct: 87 EPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHERYEPGAD 146 Query: 120 TGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 TGE + H G E G V+ GEI LT+ Q L AG SY + PH F N S ++S Sbjct: 147 TGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVSDREAVVVS 206 Query: 179 AHTP 182 A TP Sbjct: 207 ACTP 210 >UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8G1_9GAMM Length = 184 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL IR+ +GLSQR A+ +G+T+SAIS IE ++VSP++S+L+K+L G+SL+EFFS Sbjct: 4 GERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSLTEFFS 63 Query: 69 EPEKPD-EPQVVINQDDLIEMGSQGVSMKLV-HNGNPNRTLAMIFETYQPGTTTGERIKH 126 +K + QVV D+L+++ V+ KLV + R++ + +TY + + Sbjct: 64 IKQKDKLDYQVVYRSDELLDVSLDEVTTKLVGKHFLKERSMGLTLQTYPVASRAEVKATS 123 Query: 127 Q-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 Q E+ G V++GE+ L I G+ + LVAG S+ + H F N G ++S T T Sbjct: 124 QISEKAGYVIKGEMTLEIQGEVHPLVAGDSFYFESHFAHRFINQGRGEALLLSVQTVT 181 >UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UA69_SINMW Length = 182 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%) Query: 24 RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83 R A SG++HS IS IE+D++SP+I TL +L G +L FFS+ + + Sbjct: 20 RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79 Query: 84 DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142 DLIE+G +S +++ +PNR + M+ E Y G TGE H +E G VL G + +T Sbjct: 80 DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139 Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 + Q L G Y ++ +PH F N G ++SA TP T+ Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182 >UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BG67_9GAMM Length = 181 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 4/163 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKRL E+R++ G+SQR A+ G+T+S IS IE++ VSP++S+LQK+L ++L EFF Sbjct: 4 GKRLQEVRKKAGISQRELAKRVGVTNSTISMIEKNNVSPSVSSLQKVLSGMSMTLLEFF- 62 Query: 69 EPEKPD--EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125 E E D PQ+ DD ++ S V +L+ PNR L + ET+ PG R+ Sbjct: 63 EAEDNDIYVPQINYTDDDFQDVSSSQVRRRLLGQYFPNRKLEFVSETFPPGAERRIRLGV 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G++ G V+ G++VL + + L G + + H F N Sbjct: 123 ESGDKAGMVISGQLVLILGERTVVLEPGNGFYFESSDVHFFRN 165 >UniRef50_C5BTI6 DNA-binding protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTI6_TERTT Length = 200 Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 101/174 (58%), Gaps = 8/174 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL +R+Q GLSQR A + +T+S +S IEQ KVSP++++L+K+L ++L EFFS Sbjct: 23 GERLQAVRKQHGLSQRELARRAEVTNSTLSMIEQGKVSPSVASLEKVLSAIPMTLQEFFS 82 Query: 69 EPEKPDEPQVVINQDDLIEM---GSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERI 124 + + P + D + + G++ + M L G+ L+ +TY PG+ + E + Sbjct: 83 DTLEILPP--IYRAADFLSIRKDGTENLIMPLPEAGHDGVYLSR--QTYSPGSQISTEWM 138 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +G G V+EGE+VL ++G +Y L G+ + + HS +N SA C +I+ Sbjct: 139 IRKGFVGGIVVEGELVLRLDGNEYQLGVGEGFHFSLHRSHSLANQSAHDCVVIT 192 >UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales RepID=Q3A2S3_PELCD Length = 188 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 5/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L +R L+Q + LT IS +E D P+I+TL+ +L V+G+S+ EFF+ Sbjct: 8 GEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVSMQEFFT 67 Query: 69 EPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 +P + +VV D ++ + G + ++L+ G NR + T +PG E+ H Sbjct: 68 DPV---DTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEMEEQDFH 124 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G VL G I + ++ + Y + + + + HS N G RI+ TP TF Sbjct: 125 EGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVVTPPTF 183 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L ++R +GL+Q AE + L+ S IS +E DK SP+I TL+++L+ G L FFS Sbjct: 16 GEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKHFFS 75 Query: 69 EPEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 + E E +VV +++ + + +GV +++ +G ++ + I T +PG T E H Sbjct: 76 DVE---EERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESYH 132 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT 169 +G E G V++G I L ++ + Y L G + H N+ Sbjct: 133 EGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNS 175 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 4/180 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK + E+R + ++ R A+ SG + S +S +E+D +SP +++L+K+ G++++ FFS Sbjct: 4 GKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITSFFS 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125 + + +V+ +D + +GS+ V + + + N L ++ G +G+ Sbjct: 64 -GDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDYNI 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H GEE V++G++ +T++G+ L G S N+ +PH + NT G ++ +TP TF Sbjct: 123 HLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPPTF 182 >UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMV2_MOBAS Length = 193 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 10/184 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L +R LS ++ A G + S +S +E +V+P ++ L+KL+ G++++ F Sbjct: 13 GRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGINIA-FLF 71 Query: 69 EPEKPDEPQVVIN---QDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 EP+ DE +++ + +I +G G+ ++ + P L PG +T Sbjct: 72 EPQ--DEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPGGSTD 129 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEEIG VLEG LT+ G + L G S+A + PH + N + R++ +T Sbjct: 130 GAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVLWVNT 189 Query: 182 PTTF 185 P TF Sbjct: 190 PPTF 193 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 15/183 (8%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R +GLS + AE G++ +S IE+ +S +++TL+KL K Y L++ + F Sbjct: 119 GLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDLF- 177 Query: 69 EPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTTG-E 122 ++ Q ++ + ++ S GV M+L+ GNP + E + PG +G E Sbjct: 178 --DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP------VMEPHLFHVAPGAGSGDE 229 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+GEE VL G + L ++G++Y L G S+ + PH +SNT + ++ +TP Sbjct: 230 EYSHEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTP 289 Query: 183 TTF 185 TF Sbjct: 290 PTF 292 >UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella bronchiseptica RepID=Q7WMB8_BORBR Length = 172 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 + +R SQR A +G+TH+ ++ IE+ ++ P++ TL+ LL G+S+ +FF Sbjct: 1 MQALRVSLSFSQRELARRAGVTHTTVAAIEKGRIDPSLGTLKSLLAACGVSMGDFF---- 56 Query: 72 KPDEPQVVINQDDLIE-MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-IKHQGE 129 + D + + + I + + GV M+ V P + L + E Y G TG++ ++H+G+ Sbjct: 57 RSDRVESAVTEKHKISTVSTGGVHMRYVAPAQPGKLLQLTQELYDVGADTGQKPLRHEGQ 116 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E G V+ G L + + + L G SY ++ PH N II+A +P +F Sbjct: 117 EGGIVIRGTFELQLGDERHILKPGDSYYFDSTTPHRIRNIGEEEGEIINAASPPSF 172 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 5/178 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL ++R+Q GL+ R A +GL+ + +S IE + P+I++L+KL + + ++ F Sbjct: 26 GDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLFH 85 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGERIK-H 126 E PD P V I++ + S + P R L ++ PG + E + H Sbjct: 86 E---PDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGDLEVLRSVLAPGDVSAEGPRGH 142 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 E VL GE+V+TI D+ LVAG++ ++ PH + N SA I+ TP T Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200 >UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJP6_9BACT Length = 178 Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G +L EIR++ ++ ++ +G T S IS IE K SP+I++L+K+ G ++SE Sbjct: 1 MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60 Query: 66 FFSEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTGE 122 F DE +V + D ++ +SM + + NR + I P G T + Sbjct: 61 LFE-----DERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTD 115 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H GEE+G V+EG+I + I +++L G+ ++ +PH N + TP Sbjct: 116 YYHHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTP 175 Query: 183 TTF 185 +F Sbjct: 176 PSF 178 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 9/183 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ E+R+ +GL+ ++ A +GL+ +S +E+ P++ L + G+ ++ FF Sbjct: 14 GTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWFFP 73 Query: 69 EPEKPDEPQ--VVINQDDLIEMG-SQGVSMKLVHNGNPNRT--LAMIFETYQPGTTTG-E 122 +P+ +P+ +V+ D + S GV +L+ +PN + L +I T+ PG +G E Sbjct: 74 DPDTVSDPEADLVVRADRRRTLRFSSGVRDELI---SPNLSGQLELIVTTFDPGAGSGAE 130 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+GEE G ++EG++ +T+ + L G + + IPH + N G +I A TP Sbjct: 131 LYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTP 190 Query: 183 TTF 185 + Sbjct: 191 PYY 193 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 8/186 (4%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E + GK++ + R + G+S R A+ SGLT S +S IE+D V+P+I TL+ + + + + Sbjct: 2 EDINLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALDVPM 61 Query: 64 SEFFSEPEKPDEPQV--VINQDDLIEMGSQGVSMKL-VHNGNPNRTLAMIFETYQPGTTT 120 +FF K DEPQV ++ + + +G + + + ++ + PG T+ Sbjct: 62 FKFF----KDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGSIEFCMMSIPPGLTS 117 Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + H GEE+ V+ G + + + G Y L G S I H + N + ++I A Sbjct: 118 GRNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFA 177 Query: 180 HTPTTF 185 TP +F Sbjct: 178 ITPPSF 183 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 3/178 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK++ ++R+++G+S + AE +GLT S +S +E+D P+I++L+K+ + + + F Sbjct: 3 GKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFLL 62 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQ 127 PE P V +Q ++ ++ +L+ + + NR + ++ +PG + E + H Sbjct: 63 NPED-HSPVVRKDQRKVLRFPQSHLTYELL-SPDLNRNMEVMMARLEPGAASCDEPLAHP 120 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VL+G + + I G+ + + G S IPH + ISA TP F Sbjct: 121 GEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 2/161 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKRL +R++Q +S R AE SGL + +S IE + SP++STLQ+L + +S FF+ Sbjct: 23 GKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISAFFT 82 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQ 127 PE P + V I ++ + G NRTL + T PG +G E I H Sbjct: 83 -PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAIIHT 141 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G+E + G+I+ T+ Q Y + G S +PH + N Sbjct: 142 GQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHN 182 >UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA Length = 185 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 3/185 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D+ + G + IR ++GL + AE ++ S +S IE+ +P+++T++ + + + Sbjct: 2 DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN--RTLAMIFETYQPGTTT 120 L +FF EPEK D ++ ++D + ++ + +L+ P + M F T + T+ Sbjct: 62 LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTNIECMKMTF-TEKNAETS 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H+GEE+ +L G++ +TI Q + G S I PH ++N +AG ++ + Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180 Query: 181 TPTTF 185 TP F Sbjct: 181 TPPEF 185 >UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN Length = 185 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 7/180 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L ++R ++GL+Q A L+ IS +E+D SP+I+TL +L+ G +L +FF+ Sbjct: 10 GEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNLKDFFN 69 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMK---LVHNGNPNRTLAMIFETYQPGTTTGERIK 125 E E ++V +++D+ E ++ ++ N N + I T +P Sbjct: 70 NDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKN-MMEPILVTLEPNGQYKNDEP 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G VL G + + + + Y G+S+ H SN + +++ TP F Sbjct: 126 HEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVSTPPYF 185 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 2/179 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ +R+++GL+ A+ S LT IS +E++ P+I L + + G+++ FF+ Sbjct: 30 GTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFA 89 Query: 69 EPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 + P++ V+ + +++ + + + P R L + + PGT + E H Sbjct: 90 SETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYSH 149 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G VL G L + + + L G S++ ++ PH + N ++ TP TF Sbjct: 150 EGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208 >UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JLN2_AGRRK Length = 205 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL RQ G++ + A + + S +S IE K SP++ L +L++V G ++ F Sbjct: 25 GTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWMFE 84 Query: 69 EPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 E + + LI + +G+S++ + +P L +PG + I Sbjct: 85 EADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAGPI 144 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H GEE+G +L G I L + + + L G S+ + +PH + N I +TP T Sbjct: 145 QHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTPAT 204 Query: 185 F 185 F Sbjct: 205 F 205 >UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile RepID=Q186J9_CLOD6 Length = 187 Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ +R+ + +S A+ S L+ IS IE++ V P+I + K+ K +++ FF Sbjct: 9 GSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALDINIGYFFE 68 Query: 69 EPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERIK 125 E + D VV N+ ++ S LV N + + + I T T E + Sbjct: 69 EIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLS-GKKIEFILVTLDGHTHKNSEFVT 127 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G +++G++ +T+ ++Y L G S+ N+ IPH + N +C + A TP +F Sbjct: 128 HEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVWAMTPPSF 187 >UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HHC8_PEPMA Length = 179 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 15/184 (8%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +R + GL+Q AE S LT IS +E+D SP++ +L LL G ++ FF Sbjct: 4 GEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMATFFM 63 Query: 69 EPEKPDEPQV--VINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTTG 121 D+P V + +DD S+ +SM LV N +I Q G T Sbjct: 64 -----DKPSVKEIFTKDDY--QSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETK- 115 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E +GEE G VLEG + ++ + Y L G + N IC++I + Sbjct: 116 EYNPFEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMS 175 Query: 182 PTTF 185 P F Sbjct: 176 PPNF 179 >UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Clostridiales RepID=A3DDF7_CLOTH Length = 179 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 5/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ ++R ++Q A+ + L+ IS IE D SP+I+TL +L+ G L FFS Sbjct: 4 GAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKTFFS 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGV--SMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 + E + Q+V + D + +++ V + + I T QPG + E H Sbjct: 64 DSE---DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLEDHPH 120 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G V++G I + I + Y + G+S+ + H N ++I TP TF Sbjct: 121 EGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPPTF 179 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 102/184 (55%), Gaps = 11/184 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D L G++++E+R++Q LS R A+L+ +T S +S IE+ +P++++L+ + Sbjct: 1 MNDLNL--GEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDD---LIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQP 116 + L FF + D+ +++ D+ +I GS+ V + L+ + + N A++ P Sbjct: 59 VPLFTFFVS--EVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIM--DLAP 114 Query: 117 GTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 T++ +RI H G+EI VLEGE+ L ++ ++ L G S + G H + N S + Sbjct: 115 NTSSCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESK 174 Query: 176 IISA 179 +I A Sbjct: 175 VIFA 178 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 4/180 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RLS +R + GL+ A +G++ +S IE+ +P+ +TL KL + + FF Sbjct: 32 GRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFFD 91 Query: 69 EPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 E EP V+ + + +G+ +L+ R L M+ PG + + Sbjct: 92 GSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPHR 150 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE+ +LEG + +T+ G++ L AG + + +PH F N I+ A TP +F Sbjct: 151 HEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPSF 210 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D GL G+ + +R+ + L+ AE +GL+ IS IE+ + P+++ L ++ + G+S Sbjct: 25 DPGL--GEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALGVS 82 Query: 63 LSEFFSEPEKPD--------------EPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTL 107 +S FF PE PD + +++ + + + G+ +L+ G + L Sbjct: 83 VSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK-L 141 Query: 108 AMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167 ++ + PG+ H+GEE G VL G + L + + L AG S+A ++ PH + Sbjct: 142 ELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHRYR 201 Query: 168 NTSAGICRIISAHTPTTF 185 N S +I A TP +F Sbjct: 202 NPSETETIVIWALTPPSF 219 >UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2 Length = 184 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 3/179 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ R+ GL+ +R AEL+ +T S +S IE+ +P++ TL+ + + L FF Sbjct: 7 GQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALNIPLFNFFL 66 Query: 69 EPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126 E +E V NQ I G VS +L+ + N + +L + P T + E + H Sbjct: 67 EDTSTEELVVRANQRKKITFPESGNVSYELL-SPNLDGSLELALMNLLPQTASSMEPVAH 125 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEEI ++EG++ L +N + L G S I H + NTS +I TP +F Sbjct: 126 KGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFGVTPPSF 184 >UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=B2JW16_BURP8 Length = 234 Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 EGL G RL R Q L+ + AE +G + S +S +E +P+++TL ++ ++ Sbjct: 43 EGL--GTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNI 100 Query: 64 SEFFSEPEKPDEP-QVVINQDDLIEMGSQ-----------GVSMKLVHNGNPNRTLAMIF 111 + S P P Q + + G+Q + ++ + P + L Sbjct: 101 AALVSGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDI 160 Query: 112 ETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 +P + E+I H GEE+G VLEGE+ LT+ + Y L AG S+ + PHS+ N Sbjct: 161 HVLEPLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGD 220 Query: 172 GICRIISAHTPTTF 185 I R++ +TP TF Sbjct: 221 VITRVLWINTPPTF 234 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 8/163 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R+ GLS + + + L+ ++S IE+D SP++ TL KL + + LS FF+ Sbjct: 26 GLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLATSFDVPLSYFFA 85 Query: 69 EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRT--LAMIFETYQPGTTTG-ER 123 +P + +VI +D EM +QG+ L+ P L ++ P +++G E Sbjct: 86 DPAADEVDGIVIRRDTGHEMDVSAQGIRKHLL---TPKALDGLQLMMVRMTPESSSGPEA 142 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 H+G + G VL G + L + G+ Y L G S+ + PH F Sbjct: 143 YGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRF 185 >UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWJ8_9PLAN Length = 183 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 7/176 (3%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 +R+ E+R GL+ AE +G+T IS IE +V+P++ TL K+ + +G+S ++ + Sbjct: 8 QRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTADLLAG 67 Query: 70 PEKPDEPQ-VVINQDDLIEMGSQGVSMK---LVHNGNPNRTLAMIFETYQPGTTTGERIK 125 ++ PQ VV+ +++ E+ G +++ L H M+ E QPG E++ Sbjct: 68 LDQ--RPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEI-QPGKGRDEKLA 124 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE V++G I + Y L G + + H+ N I R+I + Sbjct: 125 HEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVYA 180 >UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YW73_BRASO Length = 184 Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 12/182 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G RL R +G+ R A++ G S IS IE KV P++ L K++ ++ FF Sbjct: 4 GPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMASFFG 63 Query: 68 ------SEPEKP-DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + +KP D +V + D + G V +LV N A I PG Sbjct: 64 LRVDDYKQVQKPEDRMKVYV---DALRGGKGVVYERLVPVAAGNLLEANI-HVVAPGGEK 119 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + I HQGE +G ++ G I LTI+ Y + AG S+ + +S+ N RI+ + Sbjct: 120 IDLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWVN 179 Query: 181 TP 182 TP Sbjct: 180 TP 181 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +++ G+A G ++ +RQ+ + A +G++ +S +E+ SP+I++L + G Sbjct: 53 LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +++ F E P E + V D L + N R L I PG Sbjct: 113 VTVQYFV---ETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQ 169 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E H GEE V+EGE+ LT+ G+ + L AG S + +PHS+ NT+ ++ Sbjct: 170 KRSEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVW 229 Query: 179 AHTPTTF 185 TP F Sbjct: 230 VGTPRLF 236 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 13/181 (7%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G+ ++RQ QG+S R +E SG++ IS IE+D +P++ L + + + + Sbjct: 15 AIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNVPMQVM 74 Query: 67 F-------SEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 F ++ + +P + + I++GS + +L+ +G N L ++ T +PG Sbjct: 75 FGDDSGTTADSDADGDPPFLRRAAKRPRIDLGS--LHKELLTSGG-NHNLQIMILTIEPG 131 Query: 118 TTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 T+G + + E+ G VLEGE++L+++ ++ HL G S+ ++ PH+F N RI Sbjct: 132 GTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRPARI 191 Query: 177 I 177 + Sbjct: 192 L 192 >UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I178_CLOBH Length = 177 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 7/163 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ R+++GL+ + +EL+ L+ IS +E+D SP++S LQ++ +V G++L E Sbjct: 4 GEKIKYYRKKKGLTIKELSELTNLSIGFISNLERDLNSPSVSNLQQICEVLGINLMEILK 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN-RTLAMIFE--TYQPGTTTGERIK 125 E + ++ ++ + + +++ NGN N +A+ E T T+ G Sbjct: 64 STEDKEYIVCKDSRSEIFSTDDKKIKFEMLTNGNKNLNAIAITIEGNTDYNDTSWG---- 119 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 H +E+G V++G + + +N Q Y L G S +N PH + N Sbjct: 120 HSYDELGIVVKGTLEIQMNSQTYTLHEGDSIYLNKFTPHRYKN 162 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 10/184 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R GL + A + + S +S +E VSP+I+ L ++ KV +++S F+ Sbjct: 25 GARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNISGLFA 84 Query: 69 EPEKPDEPQVVINQDDLIEMGSQ-------GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 E E I + + S+ G++++ + + L PG + Sbjct: 85 PVE---ETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAASD 141 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 I+H+GEE+G V+EG + LT+ Q L AG S+ ++ PHS+ N + R++ ++ Sbjct: 142 GAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVNS 201 Query: 182 PTTF 185 P ++ Sbjct: 202 PPSY 205 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 4/176 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ + +RQ+ GLS + A +GL++ IS +E+ + P+I TL+ L + +S FF Sbjct: 27 GETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPISYFFE 86 Query: 69 EPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 + D + ++ N L+ + + GV +K + L + T PG ++G + ++ Sbjct: 87 TTDPGDVQRYIVRKNSRRLLRLTASGV-VKEALTPDGKGQLELYELTLNPGASSGTDFLQ 145 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GE+ G +L G + L ++ Q + L AG S+ + +PH F N + R+I T Sbjct: 146 HTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201 >UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGH2_9BACT Length = 196 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 5/184 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + G+R+ +IR ++GL+ + A +G + + IS IE + V P I+TL K+ KV Sbjct: 1 MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH----NGNPNRTLAMIFETYQP 116 + ++ FF E E + V+ +D + +GV ++ L ++ T +P Sbjct: 61 VKMTYFFEE-EINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKP 119 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + H+G E V+EG + + + L AG S A N+ IPH+ + Sbjct: 120 DKRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALV 179 Query: 177 ISAH 180 + AH Sbjct: 180 LCAH 183 >UniRef50_B3PEW6 Aldehyde dehydrogenase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEW6_CELJU Length = 201 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D + G++L IR+ LSQR A+ +G+T+S+IS IEQ +VSP++ +L+++L + LS Sbjct: 14 DSHMDLGRKLKAIREAHNLSQRELAKRAGITNSSISMIEQGQVSPSVQSLERILTAFPLS 73 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNG--NPNRTLAMIFETYQPGT 118 L+EFFS P ++ Q ++ +Q G +++ + NG P + IF PGT Sbjct: 74 LAEFFSPGGILPAPVLITRQLLELQQDNQVYGATIQHLVNGIDKPELDMQRIF--LPPGT 131 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + G+ +L+G I L L G + G + F NT +++ Sbjct: 132 RSALAYARVGDVSAVLLDGYITLYCGEVIMSLQPGDGVYLRRGHFYRFGNTHTDTAQLV 190 >UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I731_AZOC5 Length = 231 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 5/188 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ A G + E R +GLS +R A+ +GL+ +S +E+ SP++ L+ + G+ Sbjct: 45 SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104 Query: 62 SLSEFFSEPEKP-DEPQVVIN--QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 ++ F E P E + V+ Q +++G++G+ + + + + TL ++ PG Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSDLS-TLQIMEIILAPGG 163 Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++GE H GEE G V+EG + L I+G + L+ G S+A + +PH F N S G+ R++ Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223 Query: 178 SAHTPTTF 185 TP + Sbjct: 224 WITTPPVW 231 >UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYK9_9CLOT Length = 181 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 5/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +++ ++R+++ L+ + + +GL+ S +S +E + S AI++L+K+ G++++ FF Sbjct: 6 AQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYFF- 64 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN--PNRTLAMIFETYQPGTTTGERIKH 126 E P+ ++ +D +G + + + PNR L + T P G H Sbjct: 65 --EIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNFSH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG + + I+ +Y++ AG S + H + N S +I++ TP F Sbjct: 123 PGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLIF 181 >UniRef50_UPI00016AD0EC putative transcriptional regulator, XRE family protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AD0EC Length = 144 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 45 VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEP-QVVINQDDLIEMGSQGVSMKLVHNGNP 103 +SP I++LQK+ + L ++ DEP ++ +DL + +++ + Sbjct: 4 ISPTIASLQKIAASFQLPVTSLIDA--SADEPTRIFYKHEDLTVVALGKHTIRQIGRNLS 61 Query: 104 NRTLAMIFETYQPGTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGI 162 R L M+ +TY+PG TG+ + H GEE G V+ G + +T+ Q L G++Y + I Sbjct: 62 RRALQMMEDTYEPGADTGDAMLSHAGEEAGLVIRGHLEVTVGDQVAVLGPGEAYFFESRI 121 Query: 163 PHSFSNTSAGICRIISAHTPTTF 185 PH F N C +++A TP + Sbjct: 122 PHRFRNRGNETCVVVAAATPPSL 144 >UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY73_9RHIZ Length = 154 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 8/155 (5%) Query: 37 ISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD--LIEMG--SQG 92 +S IE KV P ++ L+KL ++++ FF KP++ VV Q + ++ +G S+ Sbjct: 2 LSKIETAKVRPTMTMLRKLADELHVNIAFFFETYSKPED--VVHRQGERPILNVGAASEE 59 Query: 93 VSMKLVHNGNPNR--TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHL 150 V+++L +R L +PG +T H GEE+G VLEGE+ +T+ + Y L Sbjct: 60 VAIRLERLPPMSRQSLLEANIHIVEPGGSTEGAFSHVGEEMGFVLEGELTITVADETYRL 119 Query: 151 VAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G S+A ++ + HS+ N + RI+ +TP +F Sbjct: 120 RTGDSFAFSSTLLHSYKNEGDRVARILWVNTPPSF 154 >UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae RepID=A9BI07_PETMO Length = 178 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 4/165 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +R + ++Q A S LT IS +E+D SP + L+ +L+ G L +FFS Sbjct: 4 GEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKDFFS 63 Query: 69 EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 E ++ ++V ++D I + GV +L+ + + + +PG +T H Sbjct: 64 NLE--NKEKIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIEKPH 121 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 +G E+G V+EGEI L +N + Y + +++ + H N S+ Sbjct: 122 EGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSS 166 >UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM1_DESHD Length = 179 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 17/181 (9%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + +R+ Q LS + AE + LT S +S IE++ SP++ TL+K+ G +S FF Sbjct: 5 GSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALGYPISSFFV 64 Query: 69 EPEK-----PDEPQVVINQDDLIEMGSQGVSMKLVHN--GNPNRTLAMIFETYQPGTTTG 121 P+ P E Q I + G++++ + N G N+ A I E + Sbjct: 65 NPQFTSTHIPAEAQRTIQINP-------GMTLRFLINNVGQRNQLGAYIAEV---ADLSE 114 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E I H G ++ VLEGE+ + ++++L G S N +PH S S ++ A T Sbjct: 115 EIIIHHGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVATT 174 Query: 182 P 182 P Sbjct: 175 P 175 >UniRef50_C1DA81 Probable transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA81_LARHH Length = 126 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 ++L +FF+ +P QV +L +G+ + + LV +P R + ++ E Y G T Sbjct: 1 MTLGDFFTFEVEPRHKQVFYRAGELHNLGTDTMQLWLVGAAHPRRDMTLLSEHYAAGADT 60 Query: 121 G-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + ++H G+E G V+ GE+ +T+ L AG +Y ++ PH F N +I+SA Sbjct: 61 GPDMLQHDGQEGGLVIRGEVEVTVGSNIQVLRAGDAYYFDSREPHRFRNVGREEAQIVSA 120 Query: 180 HTPTTF 185 TP T Sbjct: 121 STPPTL 126 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ E R +GL+ R+ A+ +G++ IS +E+ P++ T++++ +V + L F EP Sbjct: 5 RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64 Query: 71 EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGE 129 + +E VI DD + S ++ L ++ +PG + + ++ H E Sbjct: 65 D--EETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSE 122 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E V+ G + + + Q + L G S ++ +PH F N R + + TP ++ Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 8/178 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL R+Q+GLS AE +GL+ +S +E+D VSP+I +L + GL++++ F+ Sbjct: 9 GERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVGLAVADVFA 68 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTTTGERIKHQ 127 P VV D G G ++ P+ + ET PG + G+ + H Sbjct: 69 V-----APVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGSGGDELYHL 123 Query: 128 GE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 E+ V+ G I L + Y L AG S H++ N G R++ P Sbjct: 124 PSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVLWVLAPA 181 >UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3 Tax=Burkholderia RepID=Q13H28_BURXL Length = 204 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 12/177 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R QGLS A +G++ +S +E++K +P++ L++L + + L+ Sbjct: 20 GARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALLE 79 Query: 69 EPEKPDEPQVVINQD--------DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 E + +P I D L E+G G+ +L+ + + + L M+ G+ + Sbjct: 80 EDDAVSDP---ITGDFVRKAAERPLFEVGKNGMQKELL-SPHGDHDLQMMIIMLPAGSGS 135 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 E + GE+ G VLEG +VL + + L AG S+ + +PHS N S R++ Sbjct: 136 EEVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLL 192 >UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chloroflexus RepID=A9WJF8_CHLAA Length = 181 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 96/179 (53%), Gaps = 8/179 (4%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G+++ +RQ++GL+ + +E SGLT S +S +E+DKV+ +++ L+KL + + + ++ Sbjct: 1 MSLGQKIGRLRQERGLTLQEVSEGSGLTPSFLSRLERDKVNISVANLRKLAQFFSVQMTH 60 Query: 66 FFSEPEKPDEPQV--VINQDDLIEMGSQGVSMKLVHNGNPNRTL-AMIFETYQPGTTTGE 122 FF E D+ Q+ V+ D + + +++ PN L A + E Y PG++ + Sbjct: 61 FF---EGEDDQQLGQVVRVADRVRLSLDDAPVQVFSLLPPNSDLDARLIEAY-PGSSQ-Q 115 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 +G ++ VL G + T+ + Y L G + +S++NT I +++ T Sbjct: 116 GFSSRGSQMVHVLAGHVRYTLGEEQYDLAPGDTLFFRDDTAYSWTNTGHSIATMLTVST 174 >UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL Length = 189 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 6/181 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK++ ++R + L+ + +E + L+ +S +E+ + AI +L K+ K +SL+ FF Sbjct: 6 GKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQ 65 Query: 69 EPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--- 124 P+K + + + +++++ ++ + L ++ L + E T + E I Sbjct: 66 APKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEIL--PTDSKENIISY 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H+GEE VLEG + L IN + L G S ++ I H+++N ++ R+++ HTP Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183 Query: 185 F 185 F Sbjct: 184 F 184 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 5/179 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +++ +R+++ L+ + +E +GL+ S +S +E + S AI++L+K+ + ++ FF Sbjct: 6 AEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFK 65 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGN-PNRTLAMIFETYQPGTTTGERIKH 126 PE + ++ + + +G S K + +GN R + I G + H Sbjct: 66 SPELH---KFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG I+ I+G++Y + G S + IPH SN +I++ P F Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181 >UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas aeruginosa group RepID=A4XQJ4_PSEMY Length = 188 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL R+ G + + A +GLT S +S E++ ++S+L + K + L+ F Sbjct: 7 GERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVLFD 66 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 +P +P +P +N+ +G Q ++ + + + P ++ + + P E I H+G Sbjct: 67 QPAQP-QPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAV-KMNIPVGYQSELIAHEG 124 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E VL G IV TI G+DY L G S + G H +N++ +++ T F Sbjct: 125 VEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 7/182 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G ++ +RQ+ + A +G++ +S +E+ SP++++L + + G+++ F Sbjct: 16 ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75 Query: 67 FSEPEKPDEPQVVINQDDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + P E + V + L G S + +L N + R L I PG E Sbjct: 76 V---DTPSEERSVCRGEQLRFFGFADSANLFARLT-NLSEGRQLEAILVRMPPGQKRSEV 131 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEE V+EGE+ LT+ G+ + L AG S + +PHS++NT+ ++ TP Sbjct: 132 TTHAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPR 191 Query: 184 TF 185 F Sbjct: 192 LF 193 >UniRef50_Q21KB3 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KB3_SACD2 Length = 175 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L +RQ +GLSQR A + +T+S +S IEQ KVSP++++L+++L +SL FFS Sbjct: 2 GRKLMRLRQDRGLSQRELARRAEMTNSTLSMIEQGKVSPSVASLERILSAIPISLEAFFS 61 Query: 69 EPEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF---ETYQPG-TTTGER 123 QV V + +L + G ++ ++ G TLA + + QPG + T Sbjct: 62 N----STAQVGVYKEQELARVDLPGSTILML--GLSETTLAGCYLAKQVIQPGASVTINW 115 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 ++ G V +GE+ +TI+ + L G N HS N +I + P Sbjct: 116 LRRSGVIAAMVAKGEVKVTIDADVHLLREGDCLHFNLRRSHSILNPGTMPAELICSSLP 174 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 2/167 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 LA G+RL +RQ +GLS + A +GL+ +S +E+ SP++ L +L + + L+ Sbjct: 24 LAMGRRLRALRQARGLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLAS 83 Query: 66 FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123 F P EP V + + + G++ +L+ + L++ PG +TG E Sbjct: 84 LFGAAPGPAEPIVTRPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEA 143 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 + H GEE G VLEG + L + L AG S+ + PH + N S Sbjct: 144 LTHGGEEAGLVLEGRLALWVEDAALSLAAGDSFRFASRRPHRYGNPS 190 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G R+ + R Q+G++ + AE SGL+ + +E DK SP++ L +L G+ ++ Sbjct: 8 MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124 E+ V N M +G+S++L+ P R+L M+ PG T G+ Sbjct: 68 LLISQEERAHV-VRANARQGYSMNGEGLSVQLL--SAPGRSLKMMLLELAPGAATGGDNH 124 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE VL+G + ++ L G S N IPH N RI+ T Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181 >UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ Length = 274 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 2/181 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 +A G++L +R+++GL+ ++ +G++ S +S IE +V+ +I+TLQKL Y +L Sbjct: 95 IAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLY 154 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF + ++ V ++E +G+ ++L+ N +++ T PG E I Sbjct: 155 FFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALNEPAMEPLLY-TVAPGAGRNENIS 213 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVA-GQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H+GEE VL+G + + ++ + ++V G S + H + N + +TP T Sbjct: 214 HEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPPT 273 Query: 185 F 185 F Sbjct: 274 F 274 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 LA G+R+ + RQ ++ + + G++ S +S IE+D P + TL ++ +S+ Sbjct: 12 LALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSIDH 71 Query: 66 FFSEPEKPD-------EPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 F + P + D PQ I+ +I ++G++ P L P Sbjct: 72 FIATPRQADSVTRAETRPQFSISGTSIIYEQIGAE----------FPGHELTSFILNVPP 121 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G + E ++H GEE+ VL+GE++ +NGQ + L G S PHS+SN S R+ Sbjct: 122 GYES-ETVQHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARL 180 Query: 177 I 177 + Sbjct: 181 L 181 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 6/180 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ + ++RQ + L + +E +G++ +S IE+ +V ++ +L K+ K + L FF Sbjct: 16 GETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSFFE 75 Query: 69 EPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 E + E V+ ++D +++ V +L+ + + NR + M+ T + G E++ Sbjct: 76 ELNR--EKVSVVRKEDRKQLDIPRSNVIYQLL-SPDMNRKIEMLLVTLKSGEVEEHEKVT 132 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G V++G++ +T+ + L G S ++ IPH F N + A TP +F Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192 >UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3B6_THELT Length = 185 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 6/180 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +RQ + L+ R A+LSG+T IS IE KVSP++STL+ +L G ++ Sbjct: 9 GEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALGETIISLV- 67 Query: 69 EPEKPDE--PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125 E + D+ +V ++ + S G++ +L+ + N +M +PG + E Sbjct: 68 EQDVGDQIIKGIVRKEERRKVIVSPGLTYELL--SSKNNAYSMFISYLEPGADSRESFYA 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+G E G V++GE+ +T+ + L G S + IPH + N + +P +F Sbjct: 126 HEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVWVVSPPSF 185 >UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ Length = 201 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL R GL+ + A+ S + S IS IE + SP+++ L ++ +++ + Sbjct: 27 GVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALTT 86 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E + P + + +I+ G +S++ + L PG + I+H G Sbjct: 87 EEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHVG 144 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 EE+G VLEG + L + + + + AG ++ ++ PH + N RI +TP TF Sbjct: 145 EEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 4/170 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 K L +IR + GLS ++L+G++ + IE+++V+P IST+ K+ +S + S Sbjct: 34 SKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLKISFTSLLS 93 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RIKH 126 E E D V +N I S+ V N +R + + PG IK+ Sbjct: 94 EKE-ADVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVMSSDGHIKN 152 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 EE TV EGE+ L+I + Y + G S +PH + N S+ + I Sbjct: 153 -SEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVI 201 >UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax=Micrococcaceae RepID=A9WLK2_RENSM Length = 191 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 4/175 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ RQ Q L+ AE +GLT +S +E+D SP++++L L +V +S+ + F Sbjct: 16 GSRIRAARQAQRLTIEHVAEATGLTKGFLSRVERDFTSPSVASLVTLCEVLAISIGDLFV 75 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 P V + + +G +G+ +L+ + R + E G E Sbjct: 76 ---APSTHLVRAAEGPRVSLGGEGIIERLLTERSERRLQVLHAEIKPFGKGEDELYTVDC 132 Query: 129 E-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 E ++ ++EGE+ L + Y L G + + PHS++N S I R++ TP Sbjct: 133 EVDVLHIIEGELTLRFTSESYELSTGDTLSFPGREPHSWTNYSDKIVRVLWILTP 187 >UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEW8_9RHOB Length = 202 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L R+ QG++ R AE +GL+ IS E+D P++S+L+K+ +V G+SL + Sbjct: 17 GAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGVSLQDILP 76 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE---TYQPGTTTGERI- 124 E + M + S + V++ +P + AM +E T PG T I Sbjct: 77 E--------------TVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIM 122 Query: 125 -----------KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 H GEEI VLEG + + ++G+ L G S ++ PH+ N + I Sbjct: 123 RQPPGHRSELQSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEI 182 Query: 174 CRIISAHTPTTF 185 I+ T F Sbjct: 183 VLILHVCTIDVF 194 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 3/175 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R+ +G + A +GL+ S +S +E+ + + + L ++ G +++ Sbjct: 21 AIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIARL 80 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 E E P V+ + +I G G + ++V P M+ T PG GE H Sbjct: 81 V-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139 Query: 127 QGE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 Q + E VLEGE+ LT++G ++ L AG + + H + N A CR + A Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLA 194 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 14/182 (7%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL +IR+ LS +E SG++ +S +E+ P++ T++++ + G+ Sbjct: 8 GQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVPPFWLLE 67 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG------NPNRTLAMIFET--YQPGTTT 120 P++ + D +I QGV + + G P AM T +PG+ + Sbjct: 68 MPDQHNP-----EHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFDAMQLMTVVMEPGSKS 122 Query: 121 GERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G +H+G ++G +L G + L ++G+ + L AG +A ++ +PH F N ++ Sbjct: 123 GAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAEVLWI 182 Query: 180 HT 181 +T Sbjct: 183 NT 184 >UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6V3_PAESJ Length = 182 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 4/160 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + IR+++ ++ + E +GL+ +S +E +K SP+I+TL+ + + L+ Sbjct: 4 GSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAYLLL 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + K ++ Q+V + D + + G V + + + + M+ PG +TGE H+G Sbjct: 64 D--KKEKMQIV--RKDGRRITTSGPDKLKVSHLSSTKNVHMMIVELPPGASTGENHAHEG 119 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 EE+ V++G I + L AG S++ N PH+ N Sbjct: 120 EEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKN 159 >UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium RepID=A5TRU5_FUSNP Length = 184 Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L + R +G+S R A L+ S +S IEQ K SP+I L+K+ + ++ + Sbjct: 4 GEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVA-YLI 62 Query: 69 EPEKPDEPQVV-INQDDL--IEMGSQGVSMKLVHNGNPNRTLA-MIFETYQPGTTTGERI 124 E E+ D + I ++++ IE + M ++ + N + + +I+E G + + Sbjct: 63 EDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRDFY 122 Query: 125 KH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H EE +LEGE+ + + + Y L G S + + H F NTS + + +P Sbjct: 123 SHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVSPP 182 Query: 184 TF 185 TF Sbjct: 183 TF 184 >UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM0_DESHD Length = 181 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ + IR+++ L+ + A+ L++ IS IE++ VSP+++TL+++ + + L FF Sbjct: 5 GEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLESFFL 64 Query: 69 EPE--------KPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQPGTT 119 +P+ K DE Q + ++G + + L+ + N A + ++ T Sbjct: 65 DPDTEIIYSYLKKDEQQYI---------PAEGRNWRLLIDHSKTNLMGAFVVDS----TA 111 Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + + HQG E+ VLEGE L I+ +DY L AG S + I H + ++I Sbjct: 112 VDKNVYSHQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIV 171 Query: 179 AHTP 182 TP Sbjct: 172 IATP 175 >UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30FD5 Length = 205 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 3/158 (1%) Query: 27 AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86 A +G++ S +S +E + I L +L+ YG+S++E P D V ++ + Sbjct: 46 ARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETRQL 105 Query: 87 EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146 +G ++ L+ +G L M+ E PG + E H GEE VL G + L ++G Sbjct: 106 HSPEEGTTIYLLASGTDRTMLPMLLE-LAPGASLAESGHHAGEEFVHVLAGRLRLEVDGA 164 Query: 147 DYH-LVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182 + H L AG S + PH F N S R+I +P Sbjct: 165 EPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSP 202 >UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C444_9CLOT Length = 199 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 4/160 (2%) Query: 16 RQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDE 75 R+++G++ ++ +E +GL+ +S +E++ SP + +QK+ + +G SL FS E E Sbjct: 32 RRKKGMTLQQLSEATGLSIGYLSNLERNANSPTLVNIQKICEAFGTSL---FSLLEMNKE 88 Query: 76 PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTGERIKHQGEEIGTV 134 +++ ++ + S+ +MKL + + I+ T +P G G +H+ E+GTV Sbjct: 89 EDIIVRHNEREPIISEEHNMKLENIDFGLDDTSFIYMTIEPDGAGDGLWWEHEYHEVGTV 148 Query: 135 LEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 ++G + L ++ Q + L G + I H + N + C Sbjct: 149 IKGRLTLKLDNQVFELDEGDTILIKAHTRHCYYNKTQESC 188 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 9/164 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL ++R+++G++ A +GLT +S IE K+ P I+TL ++ + G ++ FF Sbjct: 6 GPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIGCDMAYFFQ 65 Query: 69 EPEKPD--EPQVVINQDD----LIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + D + +V + + D + GS G + + + ++ + T+ P G Sbjct: 66 SQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFTF-PAELQG 124 Query: 122 ER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 + +HQGEE+ VL G +V I G++ L AG S ++ +PH Sbjct: 125 DTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPH 168 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 20/185 (10%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK+L R +GL+ + LSG++ + IS IE+ P++ L KL G+S+ F Sbjct: 7 GKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFVE 66 Query: 69 EPEKPD----------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 E EK EP I +QG+ +P+ T ++ +T + Sbjct: 67 EAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQ-------DPSFT--VLHDTLEKNC 117 Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +G+ + H GEE VL+G + I + Y L +G S + +PH + N G ++ Sbjct: 118 NSGDAPMVHTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVL 177 Query: 178 SAHTP 182 +P Sbjct: 178 WVVSP 182 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G +L EIR ++ LS AA+L+G++ + + IE+ + +P +STL K+ GL +S F Sbjct: 9 GSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKIST--GLKVSFSFF 66 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERIKH 126 E+ DE ++V +Q+++ + MKL + + NR + + G Sbjct: 67 IDEEQDELEIV-DQNNIDPIIEDDARMKLYPIFPFDANRGFEIFTIELESGCNHVSTPHS 125 Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 G EE V +GE+ + I+ Q Y L G S IPH + N S Sbjct: 126 DGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVS 170 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 20/190 (10%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L GK++ R + L+ + +E G+T S +S IE+D V+P+I+TL+ + K + L Sbjct: 8 LGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKALDVPLFM 67 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG-------NPNRTLAMIFETYQ-PG 117 FF E N ++L+ + S+ L N P+ ++ F P Sbjct: 68 FFKEE----------NNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPS 117 Query: 118 TTTGERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 + E I H GEE+ +L+G++ + I ++Y L G S I H + N + Sbjct: 118 YSFTEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVK 177 Query: 176 IISAHTPTTF 185 +I A P +F Sbjct: 178 VIFAINPPSF 187 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ +R+++ L+ R AE +G++ IS IE+ +P+ +TL +L + + + Sbjct: 21 GSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQLL- 79 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGV------SMKLVHNGNPNRTLAMIFETYQPG-TTTG 121 E P+ VV+ +++ + G+ S +L+ + N L + PG T+ Sbjct: 80 --EAPESKSVVVRKNERRRLDGHGLANDDGGSYELL-TPDLNGALEATWVVTPPGYDTSA 136 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAH 180 H GEE G VL G + ++G + L AG S + IPH + N S C I Sbjct: 137 TPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIWVS 196 Query: 181 TPTTF 185 TP T+ Sbjct: 197 TPPTW 201 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 4/171 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 K +++ R++ LS + A +G++ + +S IE+ + +P I+TL K+ +SLS+ S Sbjct: 9 AKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLHISLSQLTS 68 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + I++ D+I + + VS+ + N+ M QPG H G Sbjct: 69 TSNDTID---FIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKMHSDPHHPG 125 Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 EE V +G + + ++G+ Y + Q++ N+ +PHS+ N I + S Sbjct: 126 SEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTS 176 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 5/175 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+R+ +R ++ LS A +G++ A+S IE+ S + + L + S Sbjct: 23 GRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDVEPSALIV 82 Query: 69 EPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 + +P D V N + + ++G+S L+ P L + +PG T E H Sbjct: 83 DGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGGT-ETYAH 139 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 G E G V GE+ L ++ Y L G S+A + +PHSF N C I+ +T Sbjct: 140 TGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWVNT 194 >UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KY58_9GAMM Length = 219 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 10/184 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + ++R+ +G++ +++S L+ +S +E+ P+I L + + G+++S FF Sbjct: 39 GLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALGVTISWFFQ 98 Query: 69 EPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123 ++P VV + + + G+ +L+ + N +R + M+ T+ PGT++G+ Sbjct: 99 NQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELL-SPNLSRQIEMLKCTFPPGTSSGDVP 157 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLV--AGQSYAINTGIPHSFSNTSAGICRIISAHT 181 HQGEE G +L G++ L I +D H+V G S+A + H ++N +I T Sbjct: 158 YTHQGEEAGIILSGKLNLWI--EDTHIVLEEGDSFAFASSKSHRYANLEDVETVVIWTIT 215 Query: 182 PTTF 185 P ++ Sbjct: 216 PPSY 219 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ +R+ +G++ R +E++GL+ + +S IE+ +P+ +TL +L + + FF Sbjct: 21 GNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDIPVGRFFI 80 Query: 69 EPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNR--TLAMIFETYQPG-TTTGERI 124 ++ P V + + +L + + V + P+R T+ + + PG T+ Sbjct: 81 GQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGHDTSATPF 140 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H GEE ++ G + ++G Y L G S ++ IPH + N+ +C I + P Sbjct: 141 THSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAIWVNAP 198 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 2/173 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+R+ E+R + GL+ + A+ SG++ +S +E+DK +P++ TL + G+ + F S Sbjct: 23 GERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVFIS 82 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 P KP + + + + + + P TL+ + + P E H G Sbjct: 83 TP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLI-VHIPVGYASEITAHVG 140 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 EE+ VL+G + T+ + L G S PHSF+N R++ T Sbjct: 141 EELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGT 193 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 6/178 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ + R+ +GL+ ++ SGL+ +S IE+ SP++ ++ ++ G+ LS F Sbjct: 17 GMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLFD 76 Query: 69 EP--EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123 E P E +V+ + +++G+ GV+ +L+ + + + + +PG +G E Sbjct: 77 NGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSP-DLGGEMQIYLVSIRPGGQSGPET 135 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE G VL G + LT++ + L G S+ + + H F+N ++ A++ Sbjct: 136 YTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVWANS 193 >UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium sp. Marseille RepID=A6T0N3_JANMA Length = 221 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 17/177 (9%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +SD L G+R+SE+R +G +Q R A +G T +S IE K+ P I TL K+ + Sbjct: 13 LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72 Query: 61 LSLSEFF--SEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNR-----TLAMIFE 112 L+E E+ D +V + + + + G + V N R M+F Sbjct: 73 TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVF- 131 Query: 113 TYQPGTTTGE-RIKHQGEEIGTVLEG--EIVLTING--QDYHLVAGQSYAINTGIPH 164 P E R H+GEE V +G E I+G Q + L AG S ++ IPH Sbjct: 132 ---PNEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPH 185 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ L +RQ+ G+S +A++++G++ + + IE+ + SP +STL K+ + ++ + + Sbjct: 9 GENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFKINFTTLLN 68 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAM-IFETYQPGTTTGERIK 125 E E VI ++++ + Q +MKL ++ +P R + I E + T Sbjct: 69 ENTNTYE---VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTHVSSTHS 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 H EE V+EG++ L ++G+ Y L +G S + + H + N + G Sbjct: 126 HVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKG 172 >UniRef50_C6E2Z8 Phosphate butyryltransferase n=2 Tax=Geobacter RepID=C6E2Z8_GEOSM Length = 503 Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 13/177 (7%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L + Q +G++ E G + + D++SP IS L +L G+ +SE Sbjct: 4 GGNLQAVLQARGVAPESVREALGWDRDTLDRVLTDRLSPGISELLRLATFLGVGISELLG 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLA------MIFETYQPGTTTG 121 E+ + V + GV K +H + A + E Y+ + Sbjct: 64 GAEQAGKKAVKTGSRE-----RAGVDRKNFLHYESLASAYAGRHLEPFVVEVYRDDQGSE 118 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + +H GEE +L GE+ +T+ G+++ L AG S ++ +PHS S+ S CR+++ Sbjct: 119 DVSRHAGEEFLFLLSGELQVTVAGEEFRLEAGDSLYFDSELPHSLSSLSES-CRLVA 174 >UniRef50_B9MNZ2 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MNZ2_ANATD Length = 143 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 54/75 (72%), Gaps = 2/75 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK+++E+R++ GL++ + +ELSG++ SA+S IE+ P I+TL+ + K ++L++FF+ Sbjct: 4 GKKIAELREKYGLTRYKLSELSGVSQSALSEIERGIKQPTITTLENICKALNITLADFFA 63 Query: 69 --EPEKPDEPQVVIN 81 EPE P E + +IN Sbjct: 64 EKEPEIPPEVKSLIN 78 >UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria RepID=Q4ZU57_PSEU2 Length = 201 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 5/161 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ RQ Q L A ++G++ +S IE +VS ++ L +L V G+ +S+ FS Sbjct: 18 GIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLFS 77 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTTGER 123 + ++ +++ D+ +E+ +G L H P ++ T + Sbjct: 78 QYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFPT 137 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 H G E +LEGE++ Q Y + AG S + IPH Sbjct: 138 FSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPH 178 >UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI Length = 178 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 5/176 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKRL E+R +G+S R A+ +G++ + +S IE+ P++STL+ L V+G S++ F Sbjct: 3 GKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALFR 62 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHNGNPNRTLAMIFETYQPG-TTTGERIKH 126 +P P + I VS +L H P L +F PG + I H Sbjct: 63 DPAAPSVWLSRPGERTQITGPKGTVSYERLTHGNAPMEVLRAVF---VPGQYSVAGTISH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 E V+ G + + + G + + A ++ + H + N A I+ + TP Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTP 175 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 8/180 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L K L IR+++ LS + ++L+G++ + I IE+ + SP ++T+ K+ Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP---NRTLAMI-FETYQP 116 +S + + P+ PD +V++ D I++ S+ V+ P +R + E Sbjct: 80 VSFTSLINNPQ-PD-TKVILRND--IQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAE 135 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G + E K EE TV EGE+ + IN Y L +G + PH++ N + R+ Sbjct: 136 GKLSSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRL 195 >UniRef50_A0LTQ7 Transcriptional regulator, XRE family with cupin sensor n=3 Tax=Actinomycetales RepID=A0LTQ7_ACIC1 Length = 212 Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 29/177 (16%) Query: 20 GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK------- 72 G+S R A G++ S +S IE K P++STL + GL++ E F +P + Sbjct: 21 GVSLRSLARDLGVSASLLSQIETGKSQPSVSTLYAITTALGLAMEEVFEQPTRARRSVAP 80 Query: 73 PDEPQ------------------VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114 P E VV +D + GV+ + + P+ + + TY Sbjct: 81 PMEMDLSPPARAAREERHERLGPVVTPEDRKVLHLDSGVTWEWLGR-LPHSHVEFLLITY 139 Query: 115 QPGTTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 PG T+ G ++H G E G ++ GE++LT+ ++Y L G + + + PH N Sbjct: 140 HPGGTSSSNGGLMRHHGAEYGYLISGELILTLGFEEYRLRPGDAVSFASTTPHRLRN 196 >UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum RepID=A6X8F8_OCHA4 Length = 202 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF-- 66 G R+ RQ GL+ +E+SGL+ A+S IE+ VSP + TL + +V +S ++ Sbjct: 24 GARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMSPAQLID 83 Query: 67 ---FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN--RTLAMIFETYQPGTTTG 121 F+ + + P V+ + + + GV + H +P T+ PG ++G Sbjct: 84 PQGFAAAARAN-PYVLRAGEQPEVLNAGGV---IKHRASPELIETMKSFAVRIIPGGSSG 139 Query: 122 ERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E H GEE+G V+ G L I Y L AG +A+ + H F N ++ + Sbjct: 140 EECYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGEAEAFVLWVN 199 Query: 181 TP 182 P Sbjct: 200 KP 201 >UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium RepID=Q8RFX4_FUSNN Length = 199 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 1/178 (0%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + IR+ + L + A G++ S +S IE+ +P+++T++ + +V + L +FF Sbjct: 22 GITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLEVPLFKFFM 81 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + EK ++ +DD + ++ V+ +L+ + N + + T+ + + H+ Sbjct: 82 DLEKEKYEFHLLKKDDRKIISTEYVTYELLSPDVETNIECMQMTLIGKNAETSVKPMAHK 141 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEEI +L G++ LTI L +G S I + +PH ++N +I + +P F Sbjct: 142 GEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIFSVSPPEF 199 >UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7 Tax=Rhodobacteraceae RepID=Q28QP9_JANSC Length = 205 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G + + R+Q L+ + + +GL+ +S +E+ + +P++ TL ++ + + L F Sbjct: 11 ALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSVELEYF 70 Query: 67 FSEPEKPD-------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + P+ D PQ I+ ++ + V P L+ PG Sbjct: 71 IATPKPADSLSRGGARPQFSIDGSSIL--------YESVGADFPGAELSCYILHVPPGYA 122 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + E + H+GEEI +L GEI T+ GQ + L G S + PHS+SN + RI+ Sbjct: 123 S-EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWT 181 Query: 180 HT 181 T Sbjct: 182 GT 183 >UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae RepID=B9JGR0_AGRRK Length = 272 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L +R G + + A G+T S +ST+E+ + TL L YG ++S Sbjct: 97 GRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLSG 156 Query: 69 EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFE-TYQPGTTTGERIK 125 E E+ D P V+I + + GV+++L+ G RT+ PG T+ + Sbjct: 157 E-EREDVP-VLIRSGEWRAWPETTPGVTVQLLAEG---RTMMDCHRFVLAPGATSEGAYR 211 Query: 126 HQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H GEE +L G + L + N Q + L+ G S + HS+ N G ++ +TP T Sbjct: 212 HDGEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPT 271 Query: 185 F 185 F Sbjct: 272 F 272 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 1/176 (0%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 +++ +R Q+ ++ + +E +GL+ S +S +E+ S AI++L+K+ + ++ FF+ Sbjct: 6 EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASFFAN 65 Query: 70 PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129 + Q GS ++L + R L + T+ PG H GE Sbjct: 66 YSNTNFTTRADEQKSFKIEGSSTEYIRLSGEFH-GRNLEPLLVTFAPGQVQPNTFCHPGE 124 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E VLEG ++ ++G++ + G + + +PH + N +++ TP F Sbjct: 125 EFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 4/186 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D L GK L+ IR+Q+GLS + AEL+G++ ++ IE+ +P ++TL K+ Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S F E + N ++E + + L N R E +PG Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNTRRFEVFTIEL-EPGCNH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 ++G EE V +GE+ I Y L G + PH + NT+ I +I Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEI--VIFQ 177 Query: 180 HTPTTF 185 H F Sbjct: 178 HIIYYF 183 >UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RH93_9CLOT Length = 184 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 11/175 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ ++R+++ L+ + AE +GL+ IS +E+ V P++S+L+K+ + G+S Sbjct: 3 GEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSPYLLVD 62 Query: 69 EPEKPDEPQVVI-NQDDLIEMGSQGVSMKLVHN-GNPNRT---LAMIFETYQPGTTTGER 123 + E P +V +Q +I+ + ++V P T + + F+ G + E Sbjct: 63 QSEH--HPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT----SAGIC 174 + H EEI +L+GE + + YHL AG S + +PH NT + G C Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFC 175 >UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5 Tax=Actinobacteria (class) RepID=A0JT75_ARTS2 Length = 191 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 +A G R+ RQ Q L+ + A+ +GLT +S +E+D SP++++L L +V +S+ + Sbjct: 13 VAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSISIGD 72 Query: 66 FFSEPE----KPDE-PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119 F+ PE K DE P+ I +G +G+ +L+ R + +I +P G Sbjct: 73 LFAAPETHLTKKDEGPR--------ISLGGEGIIERLL-TARSERRVQIIQAVIEPRGRG 123 Query: 120 TGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E + ++ V+ G I L + ++Y L G + PH++ N + ++ Sbjct: 124 ESELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLW 183 Query: 179 AHTP 182 P Sbjct: 184 VLVP 187 >UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO Length = 190 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 9/190 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + DE G L +R+ +GL+ AE G + +S +E+DK P+IS L+ + KV Sbjct: 5 LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64 Query: 61 LSLSEFFSE-PEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRT--LAMIFETYQ 115 +S+S F P E ++ MGS +G+ +L+ +P+ T M+ T++ Sbjct: 65 VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELL---SPDLTDDFEMVHSTFE 121 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 PG+ E + +E+ +L G + + IN + + G S+ I G +SN A Sbjct: 122 PGSRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIR-GEAFRWSNPYAEPAV 180 Query: 176 IISAHTPTTF 185 I P + Sbjct: 181 AIWVIAPPVY 190 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDE + L EIR GLS RAAEL+G++ + + IE+ + SP I+TL K+ K + Sbjct: 1 MSDESIT--LNLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 L L+ E +P + + +E GS +++K+V +P+ + +PG + Sbjct: 59 LPLTALIEESTRPSGRSGEVYRT--VEFPGS--IAVKIVFPYDPSLGAETFHVSLKPGQS 114 Query: 120 TGERIKHQ---GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 E + H EE+ VLEG + + +G L GQ + PH + + S G Sbjct: 115 H-ESLPHDTGVTEEV-FVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170 >UniRef50_B5JDI3 Helix-turn-helix domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDI3_9BACT Length = 185 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 12/170 (7%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +IR++ L+ +E SG++ + IS +E+++ + TL K+ KV+G+ ++ S E Sbjct: 20 LRDIRKRADLTLSALSERSGVSVAVISKLERNQTQAEVGTLHKIGKVFGMRATDLLSLAE 79 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKHQGEE 130 P + N+ ++ S +++ + GN + I+ T + G + I H E Sbjct: 80 AP-----ISNKKSSVKYKSGDFALEAIRYGNAD----CIYATAEAGARVSKPEIHHDDHE 130 Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 I VL G++ L + + + L AGQS + H + C ++ H Sbjct: 131 ICWVLSGKVRLDLPNESHELGAGQSIQFDAIQEHRYEAIEQ--CEVVIVH 178 >UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8Q5_9ENTR Length = 199 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R+ +G+ AE G++ S IS +E++ +I+TL K+ +V G++ ++ F Sbjct: 22 GIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGITPAKLFD 81 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGERIKH 126 P P Q I +G + + L+ +G N + +++ P G+ + Sbjct: 82 PPSTSFVPA---GQGTPISLGGEKMREYLI-SGGVNDDMMVLYSEIDPLGGSGAEPYTLN 137 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182 ++ VL GE+ + + Q Y L G + +PH++ N S +C I P Sbjct: 138 AAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWVIVP 194 >UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYS8_RHOSR Length = 254 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 17/174 (9%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L R + LS R+ A+ G++ S +S +E K P++ TL L V +SL + S Sbjct: 38 GVALKRARLDKKLSLRQVADQLGISTSLLSQVENGKTQPSVKTLFGLATVLEVSLDKILS 97 Query: 69 E--------PEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRT-LAMIFETYQPG 117 P D + D ++EM GV+ + + G RT + ++ TY+ G Sbjct: 98 GRSGLDIELPADRDAAAGIQRAADNPVLEM-ENGVTWQRLATGG--RTEIEPLYVTYEVG 154 Query: 118 TTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 ++ G++++H G E +LEG + L ++ ++ L G S+ ++ PH F N Sbjct: 155 ASSSVDGKQMRHDGAEFAYILEGTLRLRLDFDEHDLGPGDSFCFDSSRPHLFYN 208 >UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria RepID=B5EKJ2_ACIF5 Length = 181 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 K++ ++R+ +G S R A + ++ SA+S IE + SP+I+TL+K+ + ++ F + Sbjct: 6 KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65 Query: 70 PEKPDEPQVVINQD--DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER--IK 125 E P ++ + D GS S++ + G P + + + +PG GE Sbjct: 66 GETAGLPWIMRSGDRRKFYSAGSH-ASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTS 124 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 +GEE V+ G +G L G + + +PH++ N Sbjct: 125 AEGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHN 167 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 25/174 (14%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ +R+Q L+ A +G++ +S IE+ + P+I++L + + G+++ F Sbjct: 2 GNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFVG 61 Query: 69 EP---------EKPDEPQVVINQDDLIEMGSQGVSMKLV---HNGNPNRTLAMIFETYQP 116 P E P +P G++ ++ L H N + AM+F Sbjct: 62 APGDAPTACRCEAPPQP------------GAEAIAHALAQVSHLANGTKLDAMLFR-IPA 108 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 G E H GEE V+ GEI LT++ + L AG++ + + H++SN + Sbjct: 109 GQAALEVASHTGEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAA 162 >UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5R2_PAESJ Length = 187 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKR+ IR++Q +Q + G T S +S IE PA++TL K+ G+ +S+ Sbjct: 4 GKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSDLL- 62 Query: 69 EPEKPDEPQVVINQDDLIE-----MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 EP P V IN D E +G S +G ++ + + G Sbjct: 63 EP-SPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSHV 121 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT 160 H+G+E VL G++ + +Y + AG N+ Sbjct: 122 FSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNS 158 >UniRef50_B5H6V8 Transcriptional regulator n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H6V8_STRPR Length = 209 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 5/162 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G RL R+Q+G + + +G++ S +S IE + P + + +L+K YG+SL E Sbjct: 14 GPRLRATREQRGATLAGISSATGISPSTLSRIETGRRKPTLEVVLRLVKEYGVSLDELAG 73 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + P EP+ + G V + L + + ++ H+ Sbjct: 74 TAPVPAAEPRTSAP----LSFGDSKVVLPLTRYVGGLHAHKHVLPAVEGPPARPRQVSHE 129 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT 169 G E VL G + L + QD L AG + +T IPH+ +N Sbjct: 130 GYEWLCVLYGRLRLALGDQDLVLAAGDAAEFDTRIPHAVANA 171 >UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026G4_SOLUE Length = 225 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 30/192 (15%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G++L ++R ++ ++ +GL+ S +S +E K+ P ++TL ++ V+ + L FF Sbjct: 43 GRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHFFG 102 Query: 69 E------------------PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI 110 PE+ D P+ + + +Q ++ P R A + Sbjct: 103 NRRGQKTFALVRAAERLRFPERADAPKPAYFFE-CLAFAAQSKGLQAYVAEFPPRRAADV 161 Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 E + H+G E+ VLEG + + G+D+ L G S ++ PHS+ + Sbjct: 162 QEHF-----------HEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVA 210 Query: 171 AGICRIISAHTP 182 R I TP Sbjct: 211 EAPARAIVVTTP 222 >UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K5_PELCD Length = 188 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 15/185 (8%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK+L IR + L+ + +E + ++ + IS IE+ +P++ L +L V+ S++ F Sbjct: 8 GKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFVE 67 Query: 69 EPE--------KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 E E +P E + D+ Q + + G + + +P T+ Sbjct: 68 EVENTHEIVHSRPGERSCTVFDDN------QNLRTESFTAGLRDPQFTSFYCVIKPHGTS 121 Query: 121 GER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G+ + H G+E+ VL+G + +T+ G+ + + G+S + + +PH ++N S ++ Sbjct: 122 GDADMFHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWV 181 Query: 180 HTPTT 184 +P T Sbjct: 182 LSPFT 186 >UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces RepID=D1XSL5_9ACTO Length = 206 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G+AP RL ++R+ +GL+ AA + L+ + +S +E + P++ L L ++YG ++S Sbjct: 17 GVAP--RLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGTTVS 74 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 E E P E ++ L G++ + G R + + P T E + Sbjct: 75 ELLG--EMPPERDAIVRGGPL-GAGAEADGWRYRQAGGSGRAM-QALRVHVPHGTESELV 130 Query: 125 K-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H GEE VLEG + + + + L AG S ++ PH + +++ HT Sbjct: 131 RVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 32/187 (17%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G +L +RQ + + + E +GL+ + +S IE+ +V P ++TL ++ V+G+ L FF Sbjct: 32 GPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGLDHFFG 91 Query: 69 EPEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-- 125 E D P + ++ Q D +++G + P L+ +FE+ T R + Sbjct: 92 PGE--DAPVLEIVRQRDRLKLGDK--------TSGP---LSYLFESLD-FPVTKSRFQSY 137 Query: 126 ---------------HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 H G E+ V+EG + L I+G+ L G S + G HS+ Sbjct: 138 LAEFSGNGSESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVP 197 Query: 171 AGICRII 177 CR + Sbjct: 198 GQRCRAL 204 >UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5V7_MAGSM Length = 183 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G R+ ++R Q+ L+Q+ A+++ + + ++T+E+D +P+++ + K+ + GLS+ + Sbjct: 7 GMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLV 66 Query: 68 SEPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 +E E+ QVV +Q +E +V GN IF + Q G R Sbjct: 67 TERER---IQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIF-SLQAGAVYEGRPHP 122 Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G EE VLEG + L + G+ LV G S + H + N + R + Sbjct: 123 PGSEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCL 174 >UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A8GBR8_SERP5 Length = 189 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RLS++RQQQG S A+ +G++ + +S +E+ + SP S L KL YGL++S S Sbjct: 13 AQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYGLTMSRLLS 72 Query: 69 EPEKPDEPQVVINQD 83 E E DEP +++++ Sbjct: 73 EVE--DEPPELLHRE 85 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ ++R + L+ + A +G + + IS IE D VSP I+TL K+ K + + L++FFS Sbjct: 8 GPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFDVKLAQFFS 67 Query: 69 EPEKPDEPQVV-INQDDLI------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 E E +VV +Q ++ E QG + + N+ + T Sbjct: 68 EDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVTLTEKAPEA 127 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H GEE V+ G + Q L G S + + H + R++ Sbjct: 128 NTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKEVRVL 183 >UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HW94_9ACTO Length = 194 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 4/175 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL+E+R ++G S AE SG++ S +S E+ ++SP S L +L VYG ++S+ S Sbjct: 16 GVRLAELRAERGWSLGELAERSGVSKSTLSRAERAEISPTASLLNRLCGVYGRTMSQLLS 75 Query: 69 EPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 E E EP ++ + E + G + V +P ++ G +R Sbjct: 76 EIEAEAEPAPLVRSAGQPVWEDRAAGFVRRSVSPPHPGLRGELVEGRLAAGADLAYDRPP 135 Query: 126 HQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G E+ VLEG + +T ++HL G + P F R + A Sbjct: 136 VPGLEQHIWVLEGALDVTAQDVEHHLDTGDCLRLRVWGPTRFRCAGPDAVRYVLA 190 >UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F379_9PROT Length = 180 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + +R+QQGLSQR AE +G++ +A+S +E + SP+++TL+KL G++++ FF Sbjct: 5 GGTIRSLREQQGLSQRALAEAAGISAAALSQLEAGQTSPSVATLEKLADGLGIAIAAFFL 64 Query: 69 EPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER---I 124 + P + ++ +N+ + +G G + L P M+ + PG E I Sbjct: 65 DSGNPADIEIFDLNERPSVPLGQGGRFVPLTAMHQPAGFEPMLVQL-DPGGCFDENKYGI 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 K + + +G VL + + Y L QS + PH++ N S C I+ + Sbjct: 124 KSPHAFV-WMRKGRAVLEYDERSYELCEMQSVYYDARKPHNWRNISDTRCEILMVRS 179 >UniRef50_B5YHQ3 Helix-turn-helix domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHQ3_THEYD Length = 419 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G +L EIR + +SQ+ AE LT IS +E ++++P+I + ++ G+ SE Sbjct: 245 LDIGNKLREIRISRNISQKELAEKVNLTPGFISQMENNQIAPSIVSFMQICDALGVKASE 304 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVS----MKLVHNGNPNRTLAMIFETYQPGTT-T 120 +E + E + +I + D++ Q +S +++ + N L MI P ++ Sbjct: 305 ILNETKT--EEKFLIKKKDILAKLPQKISSADIYRVLSDENFQAYLIMI----PPNSSIK 358 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G + + EI +++GE+ + IN + L G + I +P + N Sbjct: 359 GHFLTKKEPEIVFLIKGEVSVRINNSIHSLQEGDFFYIKKSMPEQWQN 406 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 RL ++R +G S ++ A++SG++ SA+S IE +VSP TL + + +++S+ + Sbjct: 9 ADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQMTISQLLA 68 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH---NGNPNRTLAMIFETYQPGTTTGERIK 125 E P +P V + G S ++V G + E YQ + G K Sbjct: 69 PVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQIISYAGPS-K 127 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 E +LEG + +T+ + + L AG P F C +I Sbjct: 128 PGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLI 179 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 9/167 (5%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L F Sbjct: 100 AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 159 Query: 67 FSEPEKPDEPQV-VINQDDLIEMGS------QGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 F + +EP + V+ ++ +++ S + + +R + + + + Sbjct: 160 FKADK--EEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDSP 217 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 E +H E VL G +V+ ++G++ L AG + ++ +PHS+ Sbjct: 218 PSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSY 264 >UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria RepID=A0LGL4_SYNFM Length = 209 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ + R+Q+ L+ A +GL + + +E+ V P++ L K+ + GL L F Sbjct: 27 GTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLGTFLD 86 Query: 69 EPEKPDEPQVVINQDD----LIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGE 122 + E D V + + +++ + V+++ + G +R + + P + + Sbjct: 87 DQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPESARDK 146 Query: 123 RIK-HQGEEIGTVLEGEIVLTINGQDYH-LVAGQSYAINTGIPHSFSNTSAGICRIISA 179 ++ H+GEE VL GE V I GQ+ H L AG S N+ +PH S+ + I + Sbjct: 147 KLSAHEGEEFIVVLSGE-VEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIYAV 204 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + E+RQ+ L+ ++ +G++ +S IE + S ++ TL++L+ V G+SLS F Sbjct: 26 GNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALFK 85 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLA------MIFETYQPGTTTGE 122 E E ++ + E+ +G NG+ + LA FE++ T E Sbjct: 86 GYEASSEQVFLVPEGTAKEVVRRG-----TRNGHTYQLLASDPTAQFCFESFL--ITLHE 138 Query: 123 R------IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 R +H G E VLEG++ Q Y L AG + + IPH Sbjct: 139 RSEPFAAFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPH 186 >UniRef50_Q2RLS1 Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLS1_MOOTA Length = 101 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL E+R++ L+Q R A+LSG++ S IS IE P TL K+ GL+L+EFF+ Sbjct: 4 GNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAEFFT 63 Query: 69 EPEKPDEP 76 E E P P Sbjct: 64 E-ETPSLP 70 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 18/169 (10%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ L IR+ +GLS AEL+G++ + + IE+ +P IS L +++ G+S + Sbjct: 9 GRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLGISFTTLIE 68 Query: 69 EPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTT 120 E E V++ DD+ G+ V +N L FE+Y PG Sbjct: 69 EAET---EVTVVSPDDVEPFHEAEGAYRVYPLFSYN------LRTKFESYMVIMDPGCDH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G + G EE V +GE+ L + Y + AG S + PH + N Sbjct: 120 GSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVN 168 >UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3I6C0_9BACI Length = 182 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 3/178 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G ++ ++R++ +SQ A LT S IS IE K +P++ TL K+ +++ + ++ Sbjct: 4 LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMA- 62 Query: 66 FFSEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 +F ++ D +V + ++ +E G +L+ N + + T G Sbjct: 63 WFVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLAL 122 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+ +E ++ G I+L + + YHL G S + H F N S+ ++++ + Sbjct: 123 YTHENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIYV 180 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%) Query: 16 RQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDE 75 R++ GL+ AE +GLT S +S +E+ +P+I+ K+ +V + + FS+ + + Sbjct: 9 RRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLFSDSMEGNA 68 Query: 76 PQVVINQDDLIEMGSQGVSMKLVHNGNPNRT-LAMIFETYQPGTTTGER-IKHQGEEIGT 133 +V +D +I+ + V + P+ AM P + G + + H GEE Sbjct: 69 MTIVRAKDRVID-PANSVQSSVYDPIAPSLVGKAMQPFVVHPASVMGPKFMDHTGEEFVF 127 Query: 134 VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 V G + I GQ HL AG S + PH + SA Sbjct: 128 VHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSA 165 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 9/178 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + ++R+ ++ A+ +G T I+++E D++SP++S L +L + G+ F Sbjct: 355 GATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPGTFLR 414 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN---RTLAMIFETYQPGTTTGERIK 125 + EK + + +Q S +++ N R + E+ + K Sbjct: 415 DEEKS---AIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPV--EYK 469 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-IISAHTP 182 H+GEE VL+G++ LT++ + + L G+S N+ IPH + S R ++ +TP Sbjct: 470 HEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IK40_BORPD Length = 219 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 13/180 (7%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G++L ++R+Q GLS + A+ G++ +S +E+ SP++ + L +G+S+ Sbjct: 33 GQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSVDSLLR 92 Query: 68 ------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 E + DL++ G K ++ R+L + PG +TG Sbjct: 93 GTGQGGGEAAGRVARAGTHRRVDLLDKGIH----KEMYTPPAGRSLDLCRARIAPGGSTG 148 Query: 122 ERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + + GE+IG VL+G + L + Q L AG S+ + P + N + + +I A Sbjct: 149 DDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVIWA 208 >UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S464_9ACTO Length = 214 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 9/186 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G R+ R+++GL+ R A SGL+ +S +E+ S ++ L + K S+++FF Sbjct: 29 GGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFFD 88 Query: 68 ---SEPEK-----PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + P+ P + + + S + +++ + P+ L + PG Sbjct: 89 AGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGGR 148 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H+GEE V+ GE++ + G ++ L G S + + +PH N + + ++S Sbjct: 149 RENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDAVTTVVSV 208 Query: 180 HTPTTF 185 TP F Sbjct: 209 VTPRLF 214 >UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales RepID=Q21W54_RHOFD Length = 273 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R RQ+Q LS +A++LSGL S IST E+ +++LQ+L Y S+++ + Sbjct: 95 GVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNTSVTKLTA 154 Query: 69 ---EPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHNGNPNRTLAMIFETYQPGTTTGERI 124 EK V N+ + + G+++ +L N +L T QPG + Sbjct: 155 PEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAEN---LESLDCQKWTLQPGAGSDGAY 211 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR--------I 176 H+GEE +L+G + +TI+G G+ ++ G SFS+ SA R + Sbjct: 212 SHEGEEFIHILQGVLTITIDG-------GEQISLGEGDSISFSSQSAHAWRAVGDIPTML 264 Query: 177 ISAHTPTTF 185 + +TP +F Sbjct: 265 LWINTPKSF 273 >UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales RepID=A8I9H1_AZOC5 Length = 216 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L ++RQ++G++ R A S LT +S +E+ +P+I+ L ++ G+++++ F Sbjct: 29 GPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQLFD 88 Query: 69 EPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 P + D +E G+ G+ ++ ++PG R H Sbjct: 89 LNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRWAH 148 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 GEE V+ G + + + +D L G S I H Sbjct: 149 GGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKH 186 >UniRef50_D2S780 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=D2S780_9ACTO Length = 193 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 6/165 (3%) Query: 20 GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVV 79 GL+ A +GLT +S +E+D+VSP++++L + V G+ + + F E P V Sbjct: 31 GLTLAAVAAEAGLTKGFLSRLERDEVSPSVASLVTVCGVLGIGVGQLF---EPPATSLVR 87 Query: 80 INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGT--VLEG 137 + I G QGV L+ G R L +I +PG GE + ++ VL G Sbjct: 88 AAEAPPINFGGQGVREVLLTAGA-QRDLHVIRSVIEPGGGGGEELYSLACDVEFVHVLRG 146 Query: 138 EIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + L + G+ L AG ++ + PH++ N SA C ++ TP Sbjct: 147 RLRLLLPGEVVELEAGDAFTMPGATPHTWLNPSAATCEVLWVLTP 191 >UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus RepID=Q0S834_RHOSR Length = 187 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 +A G + R GL+ R A +GL+ +S E P++ L ++ +V G + Sbjct: 9 AVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTAH 68 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG----NPNRTLAMIFETYQPGTTT 120 + + V + + S G ++ G PN T QPG+ Sbjct: 69 ALLEQGARTPTSLVRSREGRRFAL-SDGAVLRFCSTGVRAMEPNEV------TAQPGSQA 121 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 GE +H GEE V++G + + + ++ Y L G + +PH + N +A R + Sbjct: 122 GEHTEHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLIT 181 Query: 180 HTPTTF 185 TP +F Sbjct: 182 STPPSF 187 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 86/178 (48%), Gaps = 9/178 (5%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L F Sbjct: 14 AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 73 Query: 67 FSEPEKPDEPQV-VINQDDLIEMGS------QGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 F+ + +EP + ++ ++ +++ S + + +R + + + + Sbjct: 74 FNVDK--EEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDSP 131 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 E +H E VL G +++ +NG++ L G + ++ +PHS+ + I I Sbjct: 132 PSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAI 189 >UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UR68_RHOBA Length = 233 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 5/172 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RL ++R +G++ A+ SG T S +S +E +++P++ L L G+S S Sbjct: 56 AQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSSLLE 115 Query: 69 EPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMI--FETYQPGTTTGERIK 125 + D PQ+V + D+ ++ S ++ RT + F P E Sbjct: 116 GLD--DRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGEEREPRT 173 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H+GEE TVL+G + Q++ L G S ++ + H +N A +I Sbjct: 174 HEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVI 225 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 12/173 (6%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G+ + +R+ + L+ AA +G++ S ++ IE+ V+P IS L K+ Y +S Sbjct: 7 LEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS--- 63 Query: 66 FFSEPEKPDEPQVVINQDDLIE-MGSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTT 120 F S E E VI D+ M G M +R L FETY +PG Sbjct: 64 FTSLVETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKL---FETYRIVIKPGGCL 120 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 R G EE T+ G+ V+ GQ++ L G S H + N G Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTG 173 >UniRef50_A8LCT7 Transcriptional regulator, XRE family n=22 Tax=Actinomycetales RepID=A8LCT7_FRASN Length = 214 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R+Q G + + ++G++ S +S +E + + L L K Y + L E Sbjct: 15 GPRLRALRKQNGTTLPALSRVTGISVSTLSRLESGQRRLTLELLLPLAKAYQVPLDELVG 74 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 P D P+V+ + M + L R+ MIF P T E H+G Sbjct: 75 TPPTGD-PRVLPRPFERDGM----TVVPLTRRPGGLRSFKMIFPPGWPACTR-ELQTHEG 128 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 E VL G + L + ++ L AG+ +T +PH+FSN S IS P Sbjct: 129 YEWIYVLSGRLHLFLGEREVVLTAGEVAEFDTHVPHAFSNPSPEAVEAISLFGP 182 >UniRef50_UPI0001B4F46F transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4F46F Length = 161 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 27 AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86 A+ +GLT +S +E+D+V+ ++ TLQ+L +V LS+ + F + P + + Sbjct: 2 ADRTGLTEGHLSQVERDQVNASVRTLQRLCEVLKLSVGDLFDQGGSVASPVLRFRDTHGM 61 Query: 87 EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG--EEIGTVLEGEIVLTIN 144 G +KL G + L ++ + PG +TG G EE+ VL GE+ + + Sbjct: 62 SFGEGATKIKLTPGGFDH--LEVLLGHFAPGGSTGVEPYTHGSSEELLLVLSGEVEVWVR 119 Query: 145 GQDYHLVAGQSYAINTGIPHSFSN-TSAGICRIISAHTPTTF 185 Q + L A S + PH T R++ A P T+ Sbjct: 120 EQPHRLSAFDSIHYLSSEPHRVVEVTGTEEARVLWAIAPPTY 161 >UniRef50_A4F638 Transcriptional regulator, Cro/CI family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F638_SACEN Length = 201 Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 7/162 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ +R ++GL Q A + L + ++ +E +P++ L +L + + LSE F+ Sbjct: 24 GGRIGRLRTERGLDQATLARRAELEQTHLAGVESGTATPSLPVLAQLAEALDVGLSELFT 83 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET---YQPGTTTGERIK 125 + +P VV+ D++ + G+S++++ P + ++ ++ ++ Sbjct: 84 D-ARPGPAAVVLRGDEVPSVDDGGMSVQVL---TPRAVIPGLYAARYRLSSASSAVRPVR 139 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167 H G + VL GE+ + L AG S + ++ +PH S Sbjct: 140 HVGHDWLYVLSGELHVEFESDSTTLRAGDSVSFSSKVPHKLS 181 >UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAK2_OLICO Length = 202 Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+R+ RQQ+G+S + A +GLT S +S +E+ P+I+T K+ +V+G ++ + Sbjct: 24 GERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQLLG 83 Query: 69 EPEKPDEPQVVINQDD-----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 E DE + I + + L G +++ + + P++ + + R Sbjct: 84 --ESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 H GEE+ VL G+I + + L AG + N+ PH Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPH 182 >UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEN9_9FIRM Length = 188 Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 9/183 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + R++Q +S + A ++ S +S IE +K P+++TL+++ G+++S+ Sbjct: 5 GMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKLLG 64 Query: 69 EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124 E E ++I ++ L +G G+ ++ + +P + + P +G+ Sbjct: 65 EDESVR--LMMIKKESRHRLTNLGD-GLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPY 121 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQS-YAINTGIPHSFSNTSA-GICRIISAHTP 182 H G+EI VLEG I L ++ + + G S Y I+ H F N S R++ P Sbjct: 122 THAGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNP 181 Query: 183 TTF 185 F Sbjct: 182 PYF 184 >UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2F7_DESAP Length = 245 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 41/65 (63%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R++ R++ G+SQ++ AEL+ L S IS IE SP++ L ++ + G++L+EFF Sbjct: 4 GPRIARFRERAGMSQKKLAELAALDRSHISKIESGDTSPSLEALMRICESMGVTLAEFFG 63 Query: 69 EPEKP 73 +P Sbjct: 64 SDVQP 68 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +RQ+Q L+ + A+++GL+ +S IE D+V+P I+TL K+ K + + FF Sbjct: 15 GEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIHYFFE 74 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKL-VHNGNPNRTLA----------MIFETYQPG 117 E D + ++ + + +GSQ K + +G + LA + E Q Sbjct: 75 EA--GDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQRA 132 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H+G E +L+GE+ + L AG S + PH + + R + Sbjct: 133 WDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRARAV 192 Query: 178 SA 179 + Sbjct: 193 AV 194 >UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2 Tax=Bacteria RepID=C1ZLV1_PLALI Length = 189 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 9/177 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +R+ R Q L+ + A +GLT S S +E +++P++ +L ++ G+S+S+ Sbjct: 7 AQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSDLVE 66 Query: 69 EPEKPDEPQVVI---NQDDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 ++ +PQ+ + ++ ++E S V L H P+R + T G + Sbjct: 67 GLDR--KPQMAVIRKSERKVVERNPETSDIVYESLAH-VRPDRAMDPFLLTVPAGGQRKD 123 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + H+GEE VL G++ L N + L G S + PH N R++ Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCV 180 >UniRef50_C9XPQ5 Putative transcriptional regulator (Putative uncharacterized protein) n=3 Tax=Clostridium difficile RepID=C9XPQ5_CLODC Length = 188 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ IR+ + + ++L+ L+ S IS IE+D + P++S+L+K+ +V L F Sbjct: 3 GEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMFMD 62 Query: 69 EPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + D +VI ++D + EM + VS P+ L + FE Sbjct: 63 DNNTDD---LVIRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPS-ILFVEFELKPESEDAK 118 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 + I H EEI V G + + + + L G S I +PH N S Sbjct: 119 DYIYHASEEIMVVTSGVVDICMGEKVVRLNPGDSTFIKANVPHKIINPS 167 >UniRef50_D1PQA9 Toxin-antitoxin system, antitoxin component, Xre family n=4 Tax=Clostridiales RepID=D1PQA9_9FIRM Length = 103 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 42/62 (67%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 +RL ++ Q++G S+ R A++SGL S IS I + P I TL+ + K +G++LS+FF+E Sbjct: 5 ERLRKLLQERGWSEYRLAQVSGLNESTISNIYRRNTLPTIPTLEAICKAFGITLSQFFAE 64 Query: 70 PE 71 + Sbjct: 65 SD 66 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 2/168 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+R+ +R+++GL+ A SG++ + IS +E+ + P + +L + G+SLSE Sbjct: 18 GERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGVSLSELAG 77 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E E+ V + + G +L+ G R + I G+T+GE H+ Sbjct: 78 ERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSGEFPPHRP 137 Query: 129 --EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 EE V G ++ + G ++ L G + +PH F N G C Sbjct: 138 GVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGEC 185 >UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LFU9_RALME Length = 212 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 18/167 (10%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RL+E+R+ GL+ A+ + LT S +S +E+ SP I T+ KL G+++ + + Sbjct: 31 AERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQLIT 90 Query: 69 EPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTL-------AMIFETYQPG 117 + +E + I D I G + + + P++ + E QP Sbjct: 91 RSSRANE-ILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMVPPFTLEEDQPM 149 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 + H GEE+ V+ GE+ + + + + AG S N IPH Sbjct: 150 AS------HAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPH 190 >UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales RepID=C8X7U0_NAKMY Length = 197 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL +R Q+GL+ + +G++ S +S +E + P + L L Y + L + + Sbjct: 20 GPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDDLVA 79 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 PE+ D P++ + + + L + + +I T T E H G Sbjct: 80 APEEGD-PRLRLKPGRV----KGRTVIPLTRQSDGMQAWKIIIPTSN---VTPETRSHDG 131 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +E VL G + + QD L G A +T +PH F +T I+S Sbjct: 132 DEWIYVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILS 181 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%) Query: 18 QQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQ 77 +QGLS A SG++ S IS IE+ + P+ L +L + G++ S + + + Sbjct: 32 EQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGVTFSRLMAPATEREILL 91 Query: 78 VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG--EEIGTVL 135 + ++ ++ + G + + P R + + T PG +TGE H+ E VL Sbjct: 92 IPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTGEFTAHRRGVSEYIYVL 151 Query: 136 EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 G + I + + G S H+F+N C Sbjct: 152 RGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEAC 190 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G+++ ++RQ+Q L+ + +ELSGL+ +S IE D+V+P I+TL K+ K + + Sbjct: 13 LRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIHY 72 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-------- 117 FF E E D+ ++V+ + Q + + N P+ ++ + PG Sbjct: 73 FFEEEE--DQQKLVLTR-----ASQQTATRRRTGNDAPH---GYVYRSLAPGIRHKPMEP 122 Query: 118 ---------TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 +H G E +LEGE+ L G S ++ PH + Sbjct: 123 FLVEFELTEWDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGY 180 >UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Thermoprotei RepID=A1RRK6_PYRIL Length = 516 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 39/60 (65%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RLSE+R+++GLS R A L+G++ S + IE DK+SP+I+TL + G+ E + Sbjct: 6 GNRLSELRRRKGLSLSRLARLAGVSKSTLWEIENDKISPSINTLWAIANALGVPFGELVT 65 >UniRef50_C7Q0I6 Transcriptional regulator, XRE family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0I6_CATAD Length = 223 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 5/172 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G RL +RQ+ ++ A+ +G++ S +S +E P + L L + +G++L E Sbjct: 41 AVGPRLKRLRQRSDITLTDLAKKTGISASTLSRLEAGLRRPTLEQLLPLARAHGVTLDEL 100 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 P D P++ + I G V + L + + + R H Sbjct: 101 VDAPPTGD-PRLHLRP---IACGDGSVILPLTRRPGGIQAYKFVLPAGRDDDAPDPRT-H 155 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G + VL G + L + D L AG+ +T PH F TSAG +S Sbjct: 156 AGFDWVYVLNGTLRLVLGEHDLLLKAGEVAEFDTRTPHWFGATSAGPVEYLS 207 >UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria RepID=Q7MEH5_VIBVY Length = 232 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 24/150 (16%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E L G+R+ E+R + G++ A++ +GL S +S IE +++SP +QKL + + Sbjct: 49 EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMG------SQGVSMKLVHNGNPNRTL--------AM 109 + F P K +V + D+ G +Q +L+ N+ + A Sbjct: 109 PQLFEPPRK----KVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHAR 164 Query: 110 IFETYQPGTTTGERIKHQGEEIGTVLEGEI 139 FE Y G+ ++H GEE +L G + Sbjct: 165 TFEEY------GDWVRHDGEEFLLILSGAV 188 >UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3 Length = 220 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 10/181 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL +RQ + L+ A++L+G+ + S IE +K+SP L ++++ G + + Sbjct: 32 GQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDVLT 91 Query: 69 EPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT----GE 122 + V + +D++ + + L+H + + MI Q T G Sbjct: 92 NQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHR---DSSAGMITLRMQVDARTVDEAGG 148 Query: 123 RIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+G+E VL GE+ L +G+ L AG+S ++ PH++ S ++ T Sbjct: 149 LAGHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLT 208 Query: 182 P 182 P Sbjct: 209 P 209 >UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN Length = 189 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 81/173 (46%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + +R + + ++ AE + L+ S +S +E+ K S + +L+K+ + G+S FFS Sbjct: 6 GVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYFFS 65 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 QV + + + + + N TL I T P G HQG Sbjct: 66 GESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVHQG 125 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 +E VLEG + + + +++ L G S +++ +PH++ N + + R + ++ Sbjct: 126 QEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 17/172 (9%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ +R+ +G + + A LSG++ S +S IE+ +P + ++ + +G++L + P Sbjct: 21 RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80 Query: 71 EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI-----FETYQPGTTTGERIK 125 E P VI DD M ++ RTL+ + E Y+ TG +++ Sbjct: 81 EPPKPRIDVIRSDDRSFMFRDDSDCRI-------RTLSPLHLEKDVEFYELTLRTGGKLE 133 Query: 126 HQ-----GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 Q E TV +G + LT + L G S +PH N G Sbjct: 134 SQPHFEGTREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRG 185 >UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAA2_9FIRM Length = 212 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 12/185 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK + R Q LS ++ AE ++ S +S IE K +P+++TL+ + + + + F Sbjct: 32 GKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVPMFTLFI 91 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN---PN-----RTLAMIFETYQPGTTT 120 E E D P +++ +++ I + ++G K + + P+ + M YQ + Sbjct: 92 E-EDIDRP-ILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAYQYNSDN 149 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEE+ G+I L + + L G S I H + N S C II + Sbjct: 150 FNF--HNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATCAIIFSI 207 Query: 181 TPTTF 185 +P F Sbjct: 208 SPPIF 212 >UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C9Y4D6_CROTZ Length = 199 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 +A +RL R++ ++ + +G++ + +E+ +P+I+ L K+ GLS+++ Sbjct: 20 VALAQRLKSWRKEHNVTLDTLSRRAGVSKGMLVELEKAAANPSIAILCKIAAALGLSVAD 79 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGERI 124 +P + +Q ++ G G + +L+ P+ + E ++ GER Sbjct: 80 LLDVASQPAARLIEASQIPVLWTGDSGGTARLLAGTSGPS-----MVELWRWEMRPGERF 134 Query: 125 KHQGEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G GT V +G + L++N + H+ AG S T PH ++N Sbjct: 135 TSPGHPQGTAELLHVEQGILTLSVNDERLHINAGASAVARTDAPHGYAN 183 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%) Query: 1 MSDE---GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M+D+ G A + + +R G S + A +G++ + +EQ + +P + TL ++ + Sbjct: 1 MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60 Query: 58 VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 G+ L+ E+P + ++ G G S L+ ++ + +PG Sbjct: 61 ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G EI V EG + +T++GQ + + AG + PHS+SN +CR Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 Query: 177 I 177 + Sbjct: 181 V 181 >UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUX9_DESOH Length = 433 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 9/175 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M L G R+ E+R ++G+SQ A G+T S IS +E +++ P++ L K+ ++ Sbjct: 246 MRSGSLDLGLRIKELRTKKGMSQVALARGIGVTPSTISQVENNQIFPSVPALIKMSEILS 305 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN------PNRTLAMIFETY 114 + + FF + P+VV ++ + + G++ +L+ + + I E Sbjct: 306 VDVGYFF-QTGAGSAPRVVFSEFEAMPSPVPGMARRLISCRRLMPEDMEAQCVPYIIEI- 363 Query: 115 QPGTTT-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 QPG G +GEE G ++EGE+ +T+ L G + +P + N Sbjct: 364 QPGAVLDGHFFSLKGEETGFLMEGELHMTLGHGAQPLQTGDLVYLAAEVPSQWEN 418 >UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=Deltaproteobacteria RepID=B8F9X8_DESAA Length = 433 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 11/177 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G R+ ++R ++GLSQ + A++ G+T S IS +E + + P+I L K+ ++ +S F Sbjct: 255 GTRIKQLRVKKGLSQVQMAKMVGVTASTISQVENNSIYPSIPGLLKMAEILNVSPGYLFS 314 Query: 68 SEPEK------PDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 S+ EK P + +L E GS + L GN + E T + Sbjct: 315 SDFEKRSQIVFPSGQASAVTLANLSEYEGSVKMLTPLDFEGNAE---PFMIEIEPEQTVS 371 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G H+G+E+G V G + ++ + + +G + P + N G R+ Sbjct: 372 GHFFAHRGQEMGYVARGALEISFGDEIHKAKSGDLVYLQDQTPTRWYNPGPGAARLF 428 >UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Flavobacteriaceae RepID=C0YU86_9FLAO Length = 189 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 18/184 (9%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D + GKRL +IR++ L+ A + +++ +S IE + P++ L L++ Sbjct: 1 MNDFLIGIGKRLKDIRKKNNLTINELAFKANVSNGLVSRIENGRTIPSLPVLLDLIQSLE 60 Query: 61 LSLSEFFSEPEK---------PDEPQVVINQDDLIEMGSQGVS-MKLVHNGNPNRTLAMI 110 + S FF EK P E Q VI + E+ ++G M + + + Sbjct: 61 IDASYFFEGVEKKSNAKFIYVPKESQQVIEK----EVEAEGFRYMHIFSKSLHSLGFEAV 116 Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH---SFS 167 T +P + E++ E +L+GE+ I+ ++ L G S N PH S S Sbjct: 117 LLTLEPNSKR-EKVITDAWEFKYILKGEVKYVIDNEEVSLKEGDSLYFNGKFPHVPVSIS 175 Query: 168 NTSA 171 N S Sbjct: 176 NESC 179 >UniRef50_Q9RVJ9 Epoxidase, putative n=1 Tax=Deinococcus radiodurans RepID=Q9RVJ9_DEIRA Length = 161 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL IRQQ+ L+ + + SGL S +S +E+D +P+++TL K+ G+ E F Sbjct: 18 GARLRAIRQQKRLTLEQVVQGSGLDKSYLSRLERDLTTPSVATLVKVCDALGIRPGELF- 76 Query: 69 EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNG 101 D P+ I + D L G +GV+ +L+ G Sbjct: 77 -----DPPKTRIVRRDSAPLANFGGEGVTERLLSQG 107 >UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=Firmicutes RepID=A9VF72_BACWK Length = 197 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 15/184 (8%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ + R++ ++ R A+ +G++ S IS IE+ +P+++ L+ + K + L F Sbjct: 18 GQTVLSYRKKNNMTIREFADYAGISTSLISQIERGHANPSLNVLELIAKALNVPLFTLFI 77 Query: 69 EP--------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +K D +V +D I V L + R ++ + TT Sbjct: 78 NDIDTDSLISKKKDRKKVYRENNDHI------VYDVLTPDFMKARIEMLMMDLNGYANTT 131 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H+ EEI V++GE+ + + G +Y L G I + H F N S + I+ Sbjct: 132 ESHYSHEDKEEIAVVMKGEVYVELEGNEYFLEEGDVVRIPPNVKHRFLNKSDEMNHILFV 191 Query: 180 HTPT 183 TP+ Sbjct: 192 LTPS 195 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ IR+++G + A +GL+ +S +E+ P++ +L K+ K + FF Sbjct: 9 GHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALESPIIHFF- 67 Query: 69 EPEKPDEPQVVI----NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123 E D+ QV + + L+ S G L G+ L M+ PG ++ Sbjct: 68 --EDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK--LGMLEVRLMPGEMAVDKF 123 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 ++ +GEE TV+ G + N +++ L AG S + ++ HS NT +I + P Sbjct: 124 VQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSVNPP 183 Query: 184 TF 185 F Sbjct: 184 QF 185 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 16/197 (8%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D+ G+ + IR+++ +S + A SG+ +S IE+D +P++ TL ++ + + Sbjct: 3 ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62 Query: 62 SLSEFFSEPEKPDEPQVVINQ----------DDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111 LS F ++ +++ G+ ++ +++ R M+ Sbjct: 63 PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQRLQFMVL 122 Query: 112 ETYQPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT- 169 QPG T+G + + E+ G VL+G L ++GQ L G S+ + PH F N Sbjct: 123 NI-QPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181 Query: 170 --SAGICRIISAHTPTT 184 A I II AH P Sbjct: 182 DEPASILWII-AHEPAA 197 >UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNA0_RHOE4 Length = 187 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G + GK + R +QG+ R A G++ S +S E + A++TL + LSL Sbjct: 2 GTSVGKTVRAERTRQGIPVRELARRLGVSPSFLSQFELGQSQAAVNTLFAIATELNLSLD 61 Query: 65 EFFS---EPEKPDEPQVVINQ---DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +PE+ E + ++ D + S GV + + N N + + Y+PG Sbjct: 62 VLLGNSVDPERESESESKTHEPRISDCLTFRS-GVRWQRLANTPENHHVQFLLTEYEPGA 120 Query: 119 TT--GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 + G+ + H G++ G VLEG + + I+G L +G++ + +PH N + + Sbjct: 121 DSAPGDAPQTHSGDDYGYVLEGTLTIDIDGMRRLLKSGEAIHLVGNVPHRLRNETDQTVK 180 Query: 176 II 177 I Sbjct: 181 AI 182 >UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHK0_EUBSP Length = 184 Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 11/177 (6%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L EIR+ +GLS +A+ L+ ++ S +S +E+ +V+P IST+ KL + ++ F + Sbjct: 12 LKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLKVPVTAFTLDKP 71 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKL-----VHNGNPNRTLAMIFETYQPGTTTGERIKH 126 KP + +++ + +L +G + F+ + G G R + Sbjct: 72 KPFSK---TGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFD--EGGMMPGNRQMN 126 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHTP 182 E TV G++ L+ ++Y L AG++ + N + + NT G+ I H P Sbjct: 127 GTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTASIVVHYP 183 >UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS09_RUBXD Length = 292 Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 84/179 (46%), Gaps = 5/179 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 PG+RL +R + + + +E +GL+ S IS +E+ ++++L++L + YG+++ E F Sbjct: 118 PGERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELF 177 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + + P V ++ ++E GV + + G + + + G + H Sbjct: 178 GTDLEQNSPLVRAHERPVMEW-DNGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHD 234 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVA-GQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE V+ G + + + Q + V G + ++ PH + + + +TP TF Sbjct: 235 GEEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWWAGDEPV-EAVYVNTPPTF 292 >UniRef50_B9MNH1 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MNH1_ANATD Length = 77 Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 42/64 (65%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK+L ++R Q+GLSQ++ A+++G+ S I IE++ +P I T+++L G+S+ EF Sbjct: 3 GKKLRKLRTQKGLSQQQLAKIAGVPQSTIWYIERENRNPTIKTMKRLATALGVSIEEFLD 62 Query: 69 EPEK 72 K Sbjct: 63 SETK 66 >UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B57C0C Length = 213 Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 13/170 (7%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + E + G+ + E R + +S A SGL+ +S +E+ +P++S++ ++ + + Sbjct: 29 TPEAIEVGRAIRECRTARRVSMAVLAARSGLSQPFLSQLERGLATPSLSSIYRIAEALDV 88 Query: 62 SLSEFFSEPEKP------DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 + F P +P +PQV+ + + G +++ G + + ++ Sbjct: 89 APGTFLRPPGRPGVVSHESDPQVIRVSE------AAGQVARVLIPGGRSALMEAYEHHFE 142 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPH 164 PG +H GE+ VLEG +VL + G++ L AGQS +PH Sbjct: 143 PGQGERGWFEHPGEDFLYVLEGSVVLEVRGEEPLLLTAGQSAHHRGDLPH 192 >UniRef50_UPI0001C376DB transcriptional regulator, XRE family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C376DB Length = 102 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 39/61 (63%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL EIR+ +G S + + SGL+ IS +E+ P I TLQKLL G++L+EFF+ Sbjct: 4 GTRLREIRKAKGFSMYKLHKESGLSQGHISDLEKCINQPTIETLQKLLTPMGVTLAEFFN 63 Query: 69 E 69 E Sbjct: 64 E 64 >UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14Q08_SPICI Length = 177 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 7/179 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +RQ+ L+ A LT IS +E+D SP+I TL+ +L+V G +L++FF Sbjct: 4 GEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLADFFK 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQ 127 + EK + + +E + + LV N N ++ + G + ERI + Sbjct: 64 Q-EKNRKFVYAAEEHYKVEQNNYRIEW-LVPNAQVNELEPILIQIKPQGES--ERILPFE 119 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQ-SYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G+ G VL+G VL +GQ + S+ + H N + I ++ TP F Sbjct: 120 GQIFGYVLKG-TVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177 >UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales RepID=A1BBT3_PARDP Length = 184 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 5/152 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G+ + +R+ +G++ A G + +S +E+ + +P++ L ++ G+++S FF Sbjct: 6 GEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFFR 65 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 S P+E +V+ D +GSQ G+ +L+ + + + MI T+ PG ++G R K Sbjct: 66 SSSRAPEERGLVLRAADRTPIGSQESGLVEELL-SPTLSGSFEMIKSTFAPGASSGGRRK 124 Query: 126 HQGEEIGTVL-EGEIVLTINGQDYHLVAGQSY 156 + +E G VL G + L I ++ L G S+ Sbjct: 125 ARPKEDGGVLISGRLTLIIGDREIQLEPGDSF 156 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +R+++ LS A+LSG++ S + IE+ +V+P +ST+ K+ +S S+ + E Sbjct: 12 LKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLKVSFSQLVNHTE 71 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG-EE 130 E + N L+E + V + + + R + +Q QG +E Sbjct: 72 TNVEIVDIKNLKPLLEDEGR-VRIYPTFSFDSTRRFEIYSLEFQTNGYLSTEPHLQGVQE 130 Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 TV GE+ +T+ + + + G++ PHS+ NT C Sbjct: 131 FLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANC 174 >UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AZ95_PARDP Length = 204 Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 11/170 (6%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS- 68 +RL +R+++G S RAAE G+ S +S IE K+SP + L K+++ + + ++ FS Sbjct: 16 ERLRALRERKGWSLNRAAEEVGVPPSTLSRIENRKMSPTLDLLLKIVRTFDMHPNDVFSG 75 Query: 69 EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT--TGER 123 P++ ++ ++ +++ LIE+ + + K +H I T + G Sbjct: 76 RPDQQEKQEISVSRASDPALIELPN--LFYKHLHPDMECFNFRAILITLFARSVEEYGGL 133 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDY-HLVAGQSYAINTGIPHSFSNTSAG 172 H G+E +L G++ + + G L G S + IPH++ SAG Sbjct: 134 TAHSGQEFVYLLSGKLQVHLEGHPLVTLAPGDSIMFTSSIPHAY--VSAG 181 >UniRef50_Q2CGQ2 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ2_9RHOB Length = 188 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%) Query: 27 AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86 A+ +GL+ IS IE+ +P++S+L + +V G S+ EF P++ E + ++ Sbjct: 5 ADEAGLSVGFISQIERGLTAPSLSSLATIAEVLGASIPEFLDRPKRGSETTRQAMR-EVF 63 Query: 87 EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146 + + +S + + + L + ++P GE I H+GEE+ VL GE+ + I G Sbjct: 64 ALAASDMSYERISSSFRGSQLYSVI-VHEPPGHRGEPISHRGEEMFFVLAGEVTVEIEGT 122 Query: 147 DYHLVAGQSYAINTGIPHSFSN 168 L +G S ++ HS N Sbjct: 123 IDVLRSGDSVHFDSTRVHSTWN 144 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%) Query: 27 AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDL- 85 A S L+ + +S IE+ K +P+ +TL +L + + FF +P P V+ D Sbjct: 7 AAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASP--VVRSGDRR 64 Query: 86 ----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGEEIGTVLEGEIV 140 + S G ++ + N + + PG T+ H GEE G V+ G+I Sbjct: 65 NLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMSGKID 124 Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 + ++G+ + L AG S + PH + N C I TP+ Sbjct: 125 VYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTPS 167 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 9/168 (5%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 LA G R+ + RQ +G + + AE +G++ I +EQ +P++ TL ++ G+ L Sbjct: 16 LAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGVGLPA 75 Query: 66 FFSEPEKPDEPQVVINQDDLI----EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 P +P +V + + E G +GV LV + + T PG G Sbjct: 76 LVESP-RPKPVKVTRSGEGAALWTSEQGGRGV---LVAGTESPDVVELWDWTLGPGDQHG 131 Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G +E+ VL G + + ++G L AG S + HS++N Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYAN 179 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 24/174 (13%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R E+R+ + S R AA+ +G++ S +S IE+ SP + L KL + +G+S+S+ Sbjct: 8 RFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLVGGE 67 Query: 71 E-------KPDEPQVVIN-------QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 E P Q V + L + SQ + V N P + F ++ Sbjct: 68 ELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPPHRA 127 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 G EE TV G + L + + Y L AG + + H F N S Sbjct: 128 GV----------EETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPS 171 >UniRef50_A4J2V8 Helix-turn-helix domain protein n=3 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2V8_DESRM Length = 206 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 4/77 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKR++ R++ G+S+R+ A++ G+ S I+ IE + P++ TL+++ G+ L++FF+ Sbjct: 4 GKRVTFFREKLGISKRKLAKMIGVDPSLITKIEANNTKPSLDTLERICTSLGIELADFFA 63 Query: 69 EPEKPDEPQVVINQDDL 85 E K Q+ + DDL Sbjct: 64 EECK----QLRVVSDDL 76 >UniRef50_A4J2X4 Putative transcriptional regulator, XRE family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2X4_DESRM Length = 106 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 43/69 (62%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 +++++R+ G S+ + A+ SGL+ + IS +E + P I +L ++ GL+L+EFFSE Sbjct: 9 KITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLTLAEFFSEE 68 Query: 71 EKPDEPQVV 79 KP P + Sbjct: 69 NKPLSPDIA 77 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 11/177 (6%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A +++ ++R +G S A SG++ + IE + +P+I TL ++ +G+S++ Sbjct: 14 AVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSIARL 73 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125 E+ ++ ++ G G +L+ G P+ + E + GE ++ Sbjct: 74 LEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPD-----LVELWDWRMEPGEALR 128 Query: 126 -----HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H EI VL+G +T++G D+ + AG++ + H + G R++ Sbjct: 129 SPDHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLM 185 >UniRef50_D1C7G3 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7G3_SPHTD Length = 406 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL R+ GL+Q AA G+TH+ IS E D+ +P + L +L ++YG +++ Sbjct: 8 GARLRAAREWAGLTQEEAASALGVTHALISYWENDRRTPGLGHLTRLAEIYGTTVTNLLD 67 Query: 69 EP-EKPDEPQVVINQDDLIEMGSQ 91 E+P PQ + DL ++ Q Sbjct: 68 PAHEEPAGPQPALLFRDLRDLAPQ 91 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 12/181 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G ++ E+RQ+ L+ + A +GL+ +S IE +KV P ++TL +L + ++L FF Sbjct: 19 GNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHFFQ 78 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMK-LVH-------NGNPNRTLAMIFETYQPGTTT 120 E + D+ + + + + + + K LVH N+++ + P Sbjct: 79 ESVE-DDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEF-PTQEK 136 Query: 121 GERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E + H+GEE V+EG++ + L G S I + + HSF R ++ Sbjct: 137 EEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALA 196 Query: 179 A 179 Sbjct: 197 V 197 >UniRef50_C9XR68 Putative phage DNA-binding protein n=6 Tax=Clostridium difficile RepID=C9XR68_CLODC Length = 280 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L GK L +IR+Q+ L+Q + AE+SG++ +A+ E DK P+I TL KL K + + Sbjct: 27 LQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTI 86 Query: 66 FFSEPEKPDEPQVVINQD 83 F+ + E +V+ N+D Sbjct: 87 FYFDI----ENEVMTNED 100 >UniRef50_Q2RI10 Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI10_MOOTA Length = 300 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 41/66 (62%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G +L +R++ GL+Q+ A+ G++HS I IE D++ P++STL L + G+S F Sbjct: 141 GAKLKRLREKIGLTQKELAQQVGISHSLIGQIETDRIQPSLSTLSSLAEALGVSTCYFLM 200 Query: 69 EPEKPD 74 E ++ D Sbjct: 201 EDDEED 206 >UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B5S6_9FIRM Length = 194 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 85/169 (50%), Gaps = 8/169 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+R+ E R+++ ++ R E +GL+ +S +EQ+K SP + +L ++ + + + ++ Sbjct: 8 GERIRECRKKKMMTIRVLGEYTGLSAGYLSMLEQNKTSPNVDSLARICEALDIDI-QYAL 66 Query: 69 EPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIK 125 E E P + VI+++++ + + +++++ G I T +PG + E + Sbjct: 67 EGEMPG--KTVIHREEMSKHLYPEENMTVEVADFGQGESIFEYI--TIEPGESAKKEEYR 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 H E+ V++G + + + G+ L G S I + HS SN C Sbjct: 123 HVFSEMCMVIKGTLNVEVEGKICSLHPGDSVYIKSRERHSISNPGKEPC 171 >UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB Length = 229 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 7/178 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL R+ Q ++ ++ + ++ S +S IE DK P++ +L + G+ ++ F + Sbjct: 29 GPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDITTFLT 88 Query: 69 EPEKPDEPQVVINQDD----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 E PDE +I ++ + G + ++++ + + L P + G + Sbjct: 89 L-EIPDE--FLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGGPSM 145 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+GEE+ V++GE+ +T+N + G S + H++ N S +I +TP Sbjct: 146 SHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINTP 203 >UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF Length = 180 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 24/174 (13%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKR+ +R + L+Q E + LT IS +E+D SP+I TL +L+V G + +FF Sbjct: 4 GKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKDFFD 63 Query: 69 EPEKPDEPQVVIN---QDDLIEMGSQGVSMK-LVHNGNPNRTLAMI--------FETYQP 116 E E Q VI + E +G +K LV N ++ F++++P Sbjct: 64 EEEH---NQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 + E VL+GE+ + + +Y G++ + H N S Sbjct: 121 SLS---------ETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRS 165 >UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VF82_SPHWW Length = 252 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 11/181 (6%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 PG L R +GLS R A +GL S +S +E K+ L L + G+ + + F Sbjct: 39 PGPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLF 98 Query: 68 SEPEKPDEP-------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 S PDEP + +I + E S+ + ++ + + + T Sbjct: 99 ST-AAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVEARTLE 157 Query: 121 GER--IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 R +H+GEE VL G + L + L G S ++G+ H++ S G CR++ Sbjct: 158 EYRGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRLL 217 Query: 178 S 178 S Sbjct: 218 S 218 >UniRef50_B9MNH2 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MNH2_ANATD Length = 105 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 40/65 (61%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKR+ E+R++ GLS + A+++G+ S +S IE + +P I + K+ ++L EFF Sbjct: 5 GKRIKELREKCGLSMSKLAKIAGVGQSTLSYIENGERNPTIDVIIKICNALDITLVEFFG 64 Query: 69 EPEKP 73 EKP Sbjct: 65 GEEKP 69 >UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli RepID=A5IRY5_STAA9 Length = 179 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 G ++ +R+ + L+Q AE + L+ IS IE + SP++ T +++V G + SEFF Sbjct: 4 GNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSEFFK 63 Query: 68 -SEPEK---PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 SE EK E QV+ ++ D +G + + + + + + T +PG + Sbjct: 64 DSENEKVLYKKEEQVIYDEYD------EGYILNWLVSKSNEYDMEPLILTLKPGASYKNF 117 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 + + + G+I L + + Y H SN S RI+ T + Sbjct: 118 NPSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVATAS 177 >UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales RepID=D2PZI7_9ACTO Length = 200 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 10/162 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L R +QG+S A SG+ +S +E +P I T+ L G+ +S S Sbjct: 15 GVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVSALLS 74 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGT---TTGERI 124 EP D V++ D + V ++++ NP + + +PG +TG Sbjct: 75 EPPASD--LVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTG--- 129 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 H G E VL G + +T + L G A PH + Sbjct: 130 -HPGTEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEY 170 >UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO Length = 204 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L E+R++ GL+ AA+ + L+ + +S +E + P++ L L + YG ++SE E Sbjct: 20 LRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGTTVSELLG--E 77 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGEE 130 P P V+ + + G + +G R + P + G+ ++ H GEE Sbjct: 78 TPAGPGAVVRAGTMEPTEAGGWTYW--QSGGSGRAM-QALRVRVPYGSQGDIVRVHPGEE 134 Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 VL G + L + + L G S ++ PH + ++ HT Sbjct: 135 WLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185 >UniRef50_A5V678 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V678_SPHWW Length = 259 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL IR+ + ++GL S IS +E +S L +++K + L + FS Sbjct: 18 GARLRAIRKSNNWKISDVSRMTGLAISTISKVENGHMSLTYDKLMQVVKGLSIDLVDIFS 77 Query: 69 EPEKPDEP--------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF--ETYQPGT 118 P + P + V +D+ E+ ++ + + ++ + + I T + Sbjct: 78 NPAMSEAPARAMVTARRSVGREDNSYEIDARFYNYRYLNTDLAQKAIIPILGETTAKSIE 137 Query: 119 TTGERIKHQGEEIGTVLEGE-IVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G+ I+H+GEE VLEG +V T L G+S I++ + H++ + + Sbjct: 138 EFGDMIRHEGEEFLYVLEGNLLVYTEFYNPVRLTVGESLYIDSTMGHAYIAVDCEKAKFL 197 Query: 178 SAHT 181 A T Sbjct: 198 CACT 201 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 11/172 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ E+R +GL+ ++ A + ++ S +S++E+ + +P + L ++ G+SL+E + Sbjct: 8 GLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLGVSLAELVA 67 Query: 69 EPEKPDEPQVVI----NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 EPE + +V++ +QD + E G G ++ P I T PG G Sbjct: 68 EPE---DRRVIVRRAADQDTVDEPG--GWHRSILTPVVPGVNFEWIRTTLPPGCDAGRFP 122 Query: 125 KH-QGEEIGTVLE-GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 + QG V+E G + LT+ Q L G S H + N C Sbjct: 123 AYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPC 174 >UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=A6V6S7_PSEA7 Length = 183 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RLS +R ++ L+ + AE S ++ + IS IE+++ SP S L +L G++LSE Sbjct: 8 ARRLSTLRSERRLTLAQLAERSAVSKAMISRIERNESSPTASVLGRLAGGLGVTLSELLG 67 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + P P ++ ++ E + G + V +P+ M+ E P T + + G Sbjct: 68 NTQAPAAPLCRRDRQEVWEDPASGYRRRQVGARDPHSGCEMV-EVEIPADTRLDYPRWGG 126 Query: 129 EEIG---TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRII 177 +LEG + + Q + L G ++ G+ + + +AG CR + Sbjct: 127 RPYRQRLWLLEGTLEIGYGEQRFMLEHGDR--LDFGVDRAVTFVTAGQPCRYL 177 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/174 (21%), Positives = 84/174 (48%), Gaps = 14/174 (8%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G+ + +IR+++ L+ ++ AEL+ L+ +S +E +K ++T++ + + S+ Sbjct: 1 MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHN-GNPNRTLAMIFETYQPGTTTGER 123 FF E + D++ Q +L ++ G+P L + +PG T E Sbjct: 61 FFYEHA---------SLMDVLNAKRQSFYYEQLAYDKGSPFIPLKV---KLKPGNTDLEY 108 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++H G E L+G + ++++ + L G+S + PH + N + + + Sbjct: 109 VQHDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFL 162 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 RL +R+Q+G + AE +GLT S +S +E+ P+I+ KL K + + + FSE Sbjct: 43 RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSE- 101 Query: 71 EKPDEPQVVINQDDLIEMGSQGVSM---KLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + E V MGS + + P + L + + ++ R +H+ Sbjct: 102 SRDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFR-EHE 160 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 GEE+ V +G + + + L G S N IPH Sbjct: 161 GEEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPH 197 >UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGL3_SANKS Length = 204 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 10/182 (5%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + R+Q LS + A+ +G++ +S +E+ +P++ ++Q+L G+S++ Sbjct: 24 GATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGVSVTRLL- 82 Query: 69 EPEKPDEPQVVIN--QDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 E P E VV+ + ++ + G +++ + + + +I T P T E Sbjct: 83 --EPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPAFTNVE 140 Query: 123 R-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 R +H G E TVL G + +T ++ L AG + PH ++N G ++ A Sbjct: 141 RPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVVLGAVA 200 Query: 182 PT 183 P+ Sbjct: 201 PS 202 >UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=Desulfovibrionales RepID=B8J4U1_DESDA Length = 189 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 7/163 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ R+++ + A+ +GL + +E D + P+I LQK+ + G+ L F Sbjct: 8 GSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTFLD 67 Query: 69 EPEKPDEPQVVINQ----DDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + D I+ ++ + G + + + G +R + P + Sbjct: 68 DQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSGER 127 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 + HQGEE VL+GE+++ +++ L G++ N+ +PH Sbjct: 128 KTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPH 170 >UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L3_9CLOT Length = 215 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 17/180 (9%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF----- 66 L EIR+ + LS + + L+ ++ S +S +E+ +V+P IST+ KL + ++ F Sbjct: 43 LKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLKVPVTAFTAPKP 102 Query: 67 --FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI-FETYQPGTTTGER 123 FS+ K + +V DD + V + + + FE + G G R Sbjct: 103 TPFSQTSKAEVSPLV--SDD------GRYRLYPVFSFRDGQDFEIFDFEFDEGGQMAGNR 154 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182 E TV G++ L ++Y L AG S A N + + NT G I I H P Sbjct: 155 QMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIVVHYP 214 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 5/161 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + + R ++GL+ + + ++ S +S IE + SP++ T+ +L + G++LS FS Sbjct: 29 GNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVTLSTMFS 88 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVS-----MKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + P + ++ +E+ +G L +N P + T + + T Sbjct: 89 NYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNKSETFPT 148 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 +H G E +LEG++ Y L G + + IPH Sbjct: 149 FEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPH 189 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 1/164 (0%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 + + R ++G + A +G++ + IEQ + +P++ T+ K+ G+S++ Sbjct: 23 ARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALGISITTLLD 82 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + P V Q + G +L+ L M PG ++ G Sbjct: 83 YEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESSPSDPHPTG 142 Query: 129 E-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 E+ V+ GE+ LT++G ++ + AG S + PH++ N A Sbjct: 143 TVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGA 186 >UniRef50_A4XJD0 Transcriptional regulator, XRE family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJD0_CALS8 Length = 103 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GK++ E+R+Q+ SQ + A +G++ SA+S IE+ P + TL + ++L +FFS Sbjct: 4 GKKIKELRKQKKWSQEKLAAEAGISQSALSAIERGIKQPTVETLNNICNALNITLVDFFS 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKL 97 E + P ++ +LI + S+ KL Sbjct: 64 EEKTELSPALL----ELINVASKMPENKL 88 >UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Actinobacteria (class) RepID=A6W7Y3_KINRD Length = 232 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 11/183 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL R Q + AE SGLT +S +E+D+ + +++ L +L L++ F Sbjct: 44 GSRLRAARLAQRRTVAEVAEASGLTKGFLSRLERDRATASVAALVRLCATLDLAVGSLF- 102 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQ 127 EP E V I G G+ L+ R +A+I PG +G E Sbjct: 103 EPAPAGE-VVRAGHYPPITFGGHGLRESLLTPAG-ERRVAVIVSDLDPGGGSGAEPYALD 160 Query: 128 GE-EIGTVLEGEIVLTING------QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + E VL GE+ L G + L AG + + HSF T R++ Sbjct: 161 ADVEFALVLAGEVELRFAGPAGSPAEAVVLRAGDALTFDPARAHSFRGTGETPARVLWVV 220 Query: 181 TPT 183 +P Sbjct: 221 SPA 223 >UniRef50_C5CT85 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus S110 RepID=C5CT85_VARPS Length = 262 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 8/176 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL R++ G + + AE SG++ + IS E+ +++ L + + ++ F+ Sbjct: 44 GHRLRAARKRFGWTLAQLAERSGVSITTISRAERGQLALGYENFTALGRALEMDMNAMFA 103 Query: 69 ----EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG--E 122 +P + D P V ++ G ++ + + + ++ I T G + Sbjct: 104 GAGVKPAQLDGPVVTRAGKGVVYRGLS-IAYEFLGTTAAGKQMSPIVGTVHARRIHGPED 162 Query: 123 RIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++H GEE VL GEI + NG+ HL G S ++ + H++ + S + +I+ Sbjct: 163 FVRHAGEEFAYVLSGEIEVHFENGEVVHLARGDSLYFDSRLGHAYVSVSRQLAKIV 218 >UniRef50_Q0K2B1 Putative uncharacterized protein h16_B1072 n=1 Tax=Ralstonia eutropha H16 RepID=Q0K2B1_RALEH Length = 129 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%) Query: 90 SQGVSMKLVHNGN---PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146 S G++ LV + P R + PGT G R H G+EI V+EGE+ L I+GQ Sbjct: 23 SSGLTRTLVGRADVSVPGREAVVARVEVAPGTYAG-RHTHPGDEISYVMEGEVQLLIDGQ 81 Query: 147 DYHLV-AGQSYAINTGIPHSFSNTSAGICRIISAHT 181 V AG+S+ + G+ H N S+ R++ + Sbjct: 82 SPRTVKAGESFVVPAGVVHDAHNNSSAAARVLGVYV 117 >UniRef50_C6WEH6 Cupin 2 conserved barrel domain protein n=3 Tax=Actinomycetales RepID=C6WEH6_ACTMD Length = 166 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%) Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 +H EE+ TVLEGEI T G+ + + AG + I PH+F NTS R++ TP Sbjct: 61 RHDFEEMFTVLEGEIEFTFRGEKHVVPAGTTINIPANAPHNFRNTSGAPARMLCMCTP 118 >UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Gammaproteobacteria RepID=A6VVG9_MARMS Length = 176 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+ + ++R +GLS + A +GL S +S IEQ + +P + T+ +L + + + Sbjct: 10 GRNIQKMRMAKGLSLSQLALDAGLAKSNLSRIEQGEGNPTLETIWRLAVQLNVPFGDLVA 69 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E +G GV ++L+ G N L + + + P T G Sbjct: 70 TVES--------------TLGENGVQVRLIDQGEDNPRLDVYWMSCAPNTIKQSEPHIAG 115 Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 E T++ G+++ N HL G+++ +PHS+ Sbjct: 116 TTETITLISGKLLAGENNDLRHLEIGKAHTFAADVPHSY 154 >UniRef50_Q1AYH0 Transcriptional regulator, XRE family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYH0_RUBXD Length = 134 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G +L ++R+Q G SQ A SG+ + IS IE K P+ ST++KL G+ ++E + Sbjct: 2 GPKLRQLRRQMGWSQHELARRSGVDRATISAIESGKRDPSGSTMRKLADALGVPVAELYK 61 Query: 69 EP 70 EP Sbjct: 62 EP 63 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 22/178 (12%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL---LKV-YGLSLS 64 + L +R ++ LS + AELS ++ +S IE+ +P I+TL K+ LKV Y L L Sbjct: 8 AENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVPYTLLL- 66 Query: 65 EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGN-PNRTLAMIFETYQPGTTTGE 122 E+ + +I + +L ++ +G + N P R FE +Q G Sbjct: 67 ------EQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRN----FELFQIELDEGC 116 Query: 123 RIKHQG-----EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 + G EE VLEGE+ L +N + Y L S + + H +SN G + Sbjct: 117 SYRSVGHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLK 174 >UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Tax=Alphaproteobacteria RepID=B2S813_BRUA1 Length = 650 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 13/161 (8%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L+ +R+++GL+ AELS ++ +AIS +E +P + TL L G+ E Sbjct: 8 GMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALGIEFGE--- 64 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTL-AMIFETYQPGTTTGERIKHQ 127 +V ++D+ + + G+S++L+ RT+ A + + + H Sbjct: 65 ---------LVGARNDVEVVEADGISVRLIDRQTRPRTVEAFLLDLPANAKRHADAHVHG 115 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 E VL G I + L AGQS+ +PH +S+ Sbjct: 116 VSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSS 156 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 5/166 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +R ++ L + + L+ +S IE+ +V P + TL ++ V+G+ L FF Sbjct: 16 GQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGLEHFFE 75 Query: 69 EPEKPD----EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 E + P + + D +E L N +R + + P E Sbjct: 76 EGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVN-DRPIDSFLSEFVPRAKASEPH 134 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 +H+G E+ V+ G + + I+ + L A S + PHS+ S Sbjct: 135 EHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCAS 180 >UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus RepID=A0RIX6_BACAH Length = 237 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G + EIRQ++G++ + E +GL+ +S +E +K SP+ISTL+ ++S F + Sbjct: 60 GSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLE--------TISNFLN 111 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE--------TYQPGTTT 120 P P +++ Q D +++ + V K G + + + E P Sbjct: 112 VP----LPYLLLEQKDRLKV-VKKVERKYSVYGKDEQRIEHVAEQGGLRLNLVEIPAGFP 166 Query: 121 GERI--KHQGEEIGTVLEGEIVLTINGQDYHLV-AGQSYAINTGIPHSFSN 168 E H+GEE VL G++ + +G+D +V G S++ N +PH N Sbjct: 167 KENTPNAHEGEECHLVLRGKLEVQ-HGEDVAIVEEGDSFSWNACVPHIVRN 216 >UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LD32_RALME Length = 251 Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 6/179 (3%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKRL R+ G + AELSG++ + IS E+ +++ + K + + E F+ Sbjct: 22 GKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEMFA 81 Query: 69 ---EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124 E P + +V + + Q ++ + + + ++ T TG + Sbjct: 82 GAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPEVF 141 Query: 125 -KHQGEEIGTVLEGEI-VLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE VL GE+ V NG+ L G S + + H++ + S + R I T Sbjct: 142 ASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVTT 200 >UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR92_9PROT Length = 190 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 22/171 (12%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RL +R ++G S + A S ++ + +S +E +VSP + L KL VYGL++S Sbjct: 16 AQRLKGLRAERGWSLDQLATRSAISRATLSRLENAEVSPTANVLGKLCAVYGLTMSRLMH 75 Query: 69 --EPEKP----DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 E E P E Q V N D I + VS P +TLA E + G Sbjct: 76 MVEGEFPALVRGEAQAVWN-DPEIGFRRRSVS-------PPAQTLAA--EALECEIDPGT 125 Query: 123 RIKHQG------EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167 RI + E ++ G++ +T+ GQ Y+L G P +F+ Sbjct: 126 RITYDEPPRPGLEHHLLMVNGKLAVTVGGQTYNLHPGDCLRYQLFGPSAFA 176 >UniRef50_Q1GEM6 Transcriptional regulator, XRE family with cupin sensor n=4 Tax=Rhodobacteraceae RepID=Q1GEM6_SILST Length = 239 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G+R+ +R G++ +AAE + L S I IE KVSP+ L +L + YG+ L + Sbjct: 53 LELGRRVKGLRSAAGMTLEQAAERTRLAVSTIYKIENGKVSPSFENLLRLARGYGVGLEK 112 Query: 66 FFSEPE 71 +EPE Sbjct: 113 LIAEPE 118 >UniRef50_A7K1Q3 Predicted transcriptional regulator n=1 Tax=Vibrio sp. Ex25 RepID=A7K1Q3_VIBSE Length = 84 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 35/58 (60%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 LA + E RQ GL+Q++A+ELSGL + IS IE + S I TL L +VY L L Sbjct: 7 LALANWMREARQNSGLTQKQASELSGLRQATISKIENEPASCTIETLLCLARVYQLEL 64 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +RQ++G++ A +GLT S +S +E+ + P+I+ K+ + + +++ FS Sbjct: 5 LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFS--- 61 Query: 72 KPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGT--TTGERIKH 126 D+P+V I+ D E G+ H+ R L + +PG TT H Sbjct: 62 --DDPEVSTISVDRAAERGADR------HHAVAARMLGKEMSPFVVRPGRTFTTHPHPTH 113 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166 G+E V G + L+ +G+ L AG + PH Sbjct: 114 LGQEFIFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKL 153 >UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin sensor n=21 Tax=Rhodobacterales RepID=Q1GC59_SILST Length = 188 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 22/144 (15%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 RL E R+ QGLS A LSG++ S +S IE+ + SP I+TL L + + + Sbjct: 15 RLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQVDFAGLLEAG 74 Query: 71 EKPDEPQVVINQD-DLIEMGSQGVSMKL-----------VHNGNPNRTLAMIFETYQPGT 118 E D V+ +D +I+ + ++ + V++ + A+I + + PGT Sbjct: 75 EAADRIDVLRARDVPVIDSKAAHCTIAILSPPEDVGGHEVYDISFASGGALISQPHAPGT 134 Query: 119 TTGERIKHQGEEIGTVLEGEIVLT 142 E TVLEG +VLT Sbjct: 135 ----------REQLTVLEGRVVLT 148 >UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=Bacteria RepID=A9ADC6_BURM1 Length = 224 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 8/177 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67 +R+ E+R +G + A G++ S IS IE+ SP L KL G+SL+ F Sbjct: 38 ARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVVLDKLAAGLGISLAGLFG 97 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQPGT----TTGE 122 + P +P V Q + G + + L G P+ L ++ + PG TG Sbjct: 98 GDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPS-PLQLVEVDFPPGARVAYDTGA 156 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 R ++I V+ G I +T+ + L G A+ P FSN S R I A Sbjct: 157 REIAWHQQI-WVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVA 212 >UniRef50_A7AYS6 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A7AYS6_RUMGN Length = 106 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 5/104 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M E P KR+ E+ + +S+ R A+L+ ++ +A+ I + + P I TL+++ +G Sbjct: 1 MRTEDYIP-KRVKELCSKHKVSKYRLAQLTDMSQTALGNIIKKESIPTIPTLERICDAFG 59 Query: 61 LSLSEFFS----EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN 100 +SL++FF+ P+ DE + ++ D + + + M V + Sbjct: 60 ISLAQFFAGDGMRPDLTDEQEEILETWDNLNADERRILMNFVRS 103 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 8/179 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ +R+ LS R AE SG++ +S +E+ + SP + ++ L LS+ Sbjct: 13 GSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQLLR 72 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GERIK 125 E+ V + + G +++ P + + PGT T G+ Sbjct: 73 LDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDPPV 132 Query: 126 HQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS---AGICRIISA 179 H+ E + G +VL +G Y L AG + + +PH F N A + ++SA Sbjct: 133 HEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVSA 191 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 11/174 (6%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ + R + + + A +G++ + +EQ V+P + TL +L G+ L Sbjct: 77 GARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGVGLPALV- 135 Query: 69 EPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 EP P++ N Q + G G LV P + + T P ER + Sbjct: 136 EPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAP----SERHDSE 191 Query: 128 GEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 GT V EG + + ++G Y L G + + H++ N++ R Sbjct: 192 AHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARF 245 >UniRef50_C1TKU3 SOS response transcriptional repressor, RecA-mediated autopeptidase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKU3_9BACT Length = 234 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 36/63 (57%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+RL +R+ QGL+Q A LSG+ + +S +E D++ +I T + L V G S+ Sbjct: 1 MTRGERLRRVRKDQGLTQTELARLSGVKQNTVSQVENDRIGLSIETWESLASVLGCSVGY 60 Query: 66 FFS 68 S Sbjct: 61 LVS 63 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 11/161 (6%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +R Q+G S R AE+SG++ + + IE+++ SP ++TL K+ + S F S P+ Sbjct: 19 LRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSMFISPPQ 78 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131 P Q Q + + + +P PGT + E H+ I Sbjct: 79 AEFPPTFDPQQ--------QAMVITPLFPWDPELCFDYFSLLLAPGTVS-ESTPHKAGVI 129 Query: 132 G--TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 V++G + + G + AG+ H++ N+S Sbjct: 130 EHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSS 170 >UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD Length = 459 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 +RL+E+R+ +GLSQ A GL+ A+S E+ + SP L L K+YG++L E Sbjct: 7 ERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPDTDNLIALAKLYGMTLDELVHG 66 Query: 70 P 70 P Sbjct: 67 P 67 >UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=B2T7X7_BURPP Length = 212 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 8/174 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+++ +R ++ ++ + +G++ S +S IE+DK +P I+ +L G+SL F+ Sbjct: 36 GEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLFA 95 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 P+K E V ++ + +L G LA FE Y+ G + Sbjct: 96 -PQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIE--LAGKFEWYELTLQPGGALVSNA 152 Query: 129 EEIG-----TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 E G TVL+G I + G L A + PH+ N G + + Sbjct: 153 HEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKAL 206 >UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWQ8_9PROT Length = 195 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 + ++ +R Q LS + A +G++ + IEQ + +P I+TL +L G+++ + +E Sbjct: 15 RNVALLRHGQRLSYEQLARRAGVSKGVVVQIEQARSNPNIATLCRLASALGVAVVDLLAE 74 Query: 70 PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN-PNRTLAMIFETYQPGTTTGERIKHQG 128 V ++ ++ G G + +L+ P+ + E ++ GER Sbjct: 75 DSGAGVRVVRADEVPVLWSGPNGGTARLLAGTRGPD-----MLELWEWVLHAGERYDGAA 129 Query: 129 EEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 GT V+EG + + ++GQ L AG H++ S + ++ H P Sbjct: 130 HAAGTREIVHVVEGVLAIEVDGQRIDLAAGDGMTFAGDRRHAYLAVSDLVRFTMAVHEP 188 >UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales RepID=C0Z4P6_BREBN Length = 189 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 16/172 (9%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G L +IR+++ LS +ELSG++ + IE+ + +P I L K+ K + L Sbjct: 13 LQVGGVLKKIRKEKHLSLEDLSELSGVSKLTLGNIERGETNPTIGVLWKISKCLSIPLLA 72 Query: 66 FFSEPEKPDEPQVVI-------NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 FS + + N+D +IE Q VS ++ R +Y P Sbjct: 73 LFSTENSVNLSRAGKGLRIAGDNKDWVIEPIFQNVSNEI----ETCRAYLQPNSSYYP-- 126 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 E+ H EI TV+ G + + +N + Y L S + HS+ N S Sbjct: 127 ---EKHHHNTTEIATVMSGTLSIHVNNESYVLNQYDSISFCADGTHSYINQS 175 >UniRef50_C7LUL3 Helix-turn-helix domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUL3_DESBD Length = 355 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL R+ LS R AE G++H+ I+ E+D+ P TL KL KV G+ SE+F Sbjct: 3 GERLQRARKAADLSLRNLAEQVGVSHTWINKFEKDQAMPDSKTLLKLGKVLGVR-SEYFF 61 Query: 69 EPEKPDEPQV 78 PE+ QV Sbjct: 62 RPEQVTLSQV 71 >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L ++RQQ+G S R AE +G++ + + IE+++ SP ++TL K+ + S F S P+ Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131 P V Q Q + + + +P + FE + +G + E Sbjct: 72 SAT-PSVYDPQQ-------QAMVITSLFPYDPQ----LCFEHFSIQMASGAISESTPHEK 119 Query: 132 G-----TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168 G V++G++ L ++G+ L G+ + H + N Sbjct: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 >UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria RepID=A6UEP3_SINMW Length = 234 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 12/168 (7%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 +A G + R++ G++ A + ++ +S IE SP+++TLQ L + G+ ++ Sbjct: 45 VAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPITA 104 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTT 120 FF E+ + V + + +++ +G L H G + T ++ E Y T Sbjct: 105 FFRRFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIG--SNTSGVVVEPYLITLTE 161 Query: 121 GERI----KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 I +H G E +LEGE+V Y + G S + PH Sbjct: 162 NSDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPH 209 >UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMT2_AGRRK Length = 200 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 30/150 (20%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKR+ +R ++ + + SG++ SAIS IE +++SP + KL + G+ +SE FS Sbjct: 15 GKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDISELFS 74 Query: 69 EPEK-----------PDEPQVVINQDDLIEM------GSQGVSMKLVHNGNPNRTLAMIF 111 +P K + +++ + + EM G + + +K + R Sbjct: 75 DPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRDF---- 130 Query: 112 ETYQPGTTTGERIKHQGEEIGTVLEGEIVL 141 G+ I H GEEI VL G + L Sbjct: 131 ---------GKLIAHVGEEIVVVLSGRVEL 151 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 +RL ++R+ +G S AE +G++ + + IE+ + SP ++TL KL + +SLS + Sbjct: 9 ARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFNVSLSWLLN 68 Query: 69 EPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 + ++P D I + L+ Q E Y+ G + Sbjct: 69 DEQQPMTFDFAHERIQVERLLAFDPQTQQ-----------------EVYKLCMAEGAQSH 111 Query: 126 HQGEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 GT V G + + + + AG++Y + PHS+ N +G Sbjct: 112 SDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSG 163 >UniRef50_D1WPC0 DNA-binding protein n=1 Tax=Staphylococcus epidermidis SK135 RepID=D1WPC0_STAEP Length = 96 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G +L +R+ + L+Q AE + L+ IS IE + SP++ T L++V G S S+FF Sbjct: 4 GYKLRNLRRIKNLTQEELAERTDLSKGYISQIESNHASPSMETFLNLIEVLGTSASDFFK 63 Query: 69 EP 70 EP Sbjct: 64 EP 65 >UniRef50_B9MPV1 Transcriptional regulator, XRE family n=2 Tax=Clostridia RepID=B9MPV1_ANATD Length = 118 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 GKRL E+R+Q+G +Q + A+ G+T +S E K ++ L +L ++YG + Sbjct: 10 GKRLQELRKQRGFTQEQVAKYLGITQEQLSHYENGKREVSVDILLQLARLYGCDYNYLLG 69 Query: 69 EPEKPDEPQVVIN 81 E + DE Q+ +N Sbjct: 70 EEQNTDE-QITMN 81 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax... 245 7e-64 UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C... 201 8e-51 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 200 2e-50 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 197 1e-49 UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin... 197 1e-49 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 196 2e-49 UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi... 195 5e-49 UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti... 192 6e-48 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 191 7e-48 UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin... 189 3e-47 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 189 4e-47 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 188 8e-47 UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni... 188 1e-46 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 187 2e-46 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 187 2e-46 UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De... 187 2e-46 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 186 2e-46 UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ... 186 4e-46 UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost... 185 9e-46 UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin... 184 1e-45 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 184 1e-45 UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl... 184 1e-45 UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th... 183 2e-45 UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P... 183 4e-45 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 182 4e-45 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 181 1e-44 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 180 2e-44 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 179 4e-44 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 178 6e-44 UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga... 178 6e-44 UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob... 178 6e-44 UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F... 176 3e-43 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 176 4e-43 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 175 6e-43 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 175 7e-43 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 175 8e-43 UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P... 175 9e-43 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 174 1e-42 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 174 1e-42 UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin... 173 2e-42 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 173 2e-42 UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C... 173 3e-42 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 173 3e-42 UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7... 172 6e-42 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 171 7e-42 UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi... 171 8e-42 UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo... 171 1e-41 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 170 3e-41 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 169 3e-41 UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag... 169 5e-41 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 168 6e-41 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 168 6e-41 UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh... 168 7e-41 UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ... 168 7e-41 UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ... 167 1e-40 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 167 1e-40 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 166 3e-40 UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot... 166 3e-40 UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R... 166 3e-40 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 166 3e-40 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 166 3e-40 UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin... 166 4e-40 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 165 5e-40 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 165 6e-40 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 165 7e-40 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 165 1e-39 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 164 1e-39 UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do... 163 2e-39 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 163 3e-39 UniRef50_A5V718 Transcriptional regulator, XRE family with cupin... 163 3e-39 UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin... 163 4e-39 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 161 7e-39 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 161 9e-39 UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B... 161 1e-38 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 160 2e-38 UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba... 160 3e-38 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 160 3e-38 UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa... 160 3e-38 UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin... 160 3e-38 UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax... 160 3e-38 UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein... 159 4e-38 UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo... 159 4e-38 UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria... 159 4e-38 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 159 4e-38 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 159 5e-38 UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu... 159 5e-38 UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni... 158 6e-38 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 158 6e-38 UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin... 158 6e-38 UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin... 158 7e-38 UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F... 158 7e-38 UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa... 158 7e-38 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 158 8e-38 UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator... 158 1e-37 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 157 1e-37 UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid... 157 2e-37 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 156 3e-37 UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean... 156 3e-37 UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De... 156 4e-37 UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Mari... 156 5e-37 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 155 5e-37 UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th... 155 6e-37 UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax... 155 7e-37 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 155 8e-37 UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein... 155 8e-37 UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord... 155 8e-37 UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B... 155 1e-36 UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella ... 154 1e-36 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 154 1e-36 UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax... 154 1e-36 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 154 1e-36 UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax... 154 2e-36 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 154 2e-36 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 153 2e-36 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 153 2e-36 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 153 2e-36 UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Co... 153 2e-36 UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin... 153 3e-36 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 153 4e-36 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 153 4e-36 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 152 4e-36 UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri... 152 5e-36 UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin... 152 5e-36 UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID... 152 5e-36 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 152 5e-36 UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostri... 152 6e-36 UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi... 152 6e-36 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 151 7e-36 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 151 1e-35 UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B... 151 1e-35 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 151 1e-35 UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca... 150 2e-35 UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=... 150 2e-35 UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi... 150 2e-35 UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh... 150 3e-35 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 149 3e-35 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 149 4e-35 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 149 5e-35 UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostri... 149 5e-35 UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat... 148 6e-35 UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba... 148 6e-35 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 148 6e-35 UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De... 148 7e-35 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 148 8e-35 UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc... 148 8e-35 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 148 1e-34 UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I1... 148 1e-34 UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De... 147 1e-34 UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=De... 147 2e-34 UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax... 147 2e-34 UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr... 146 2e-34 UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jo... 146 3e-34 UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S... 146 3e-34 UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac... 146 3e-34 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 146 3e-34 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 146 4e-34 UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvima... 146 4e-34 UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Na... 146 4e-34 UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B... 146 5e-34 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 145 8e-34 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 145 8e-34 UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu... 144 9e-34 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 144 1e-33 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 144 1e-33 UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi... 144 1e-33 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 144 1e-33 UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=... 144 1e-33 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 144 2e-33 UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax... 144 2e-33 UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1... 144 2e-33 UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 143 2e-33 UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh... 143 2e-33 UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter... 143 3e-33 UniRef50_C9XPQ5 Putative transcriptional regulator (Putative unc... 143 3e-33 UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coproco... 143 3e-33 UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa... 143 4e-33 UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=De... 142 5e-33 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 142 5e-33 UniRef50_C5ENH1 Transcriptional regulator n=1 Tax=Clostridiales ... 142 5e-33 UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=R... 142 6e-33 UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin... 142 6e-33 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 142 7e-33 UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De... 142 7e-33 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 141 1e-32 UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chlorofl... 141 1e-32 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 140 2e-32 UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=De... 140 2e-32 UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Fla... 140 2e-32 UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro... 140 2e-32 UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang... 140 2e-32 UniRef50_A9DT77 Transcriptional regulator, XRE family with cupin... 140 3e-32 UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin... 139 3e-32 UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=... 139 5e-32 UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp... 139 6e-32 UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Pa... 139 6e-32 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 138 7e-32 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 138 1e-31 UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=F... 138 1e-31 UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma... 138 1e-31 UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A... 138 1e-31 UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr... 138 1e-31 UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=... 137 2e-31 UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Maripro... 136 3e-31 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 136 3e-31 UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Ac... 136 3e-31 UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Pa... 136 5e-31 UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac... 136 5e-31 UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 ... 135 6e-31 UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burne... 135 6e-31 Sequences not found previously or not previously below threshold: UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh... 170 2e-41 UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD 156 4e-37 UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill... 155 8e-37 UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium sm... 154 2e-36 UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu... 153 2e-36 UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl... 153 2e-36 UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI... 149 4e-35 UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin... 149 4e-35 UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil... 149 5e-35 UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B... 147 2e-34 UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein... 146 3e-34 UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=... 146 4e-34 UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ... 145 6e-34 UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 ... 145 7e-34 UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe... 144 1e-33 UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha... 144 1e-33 UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Ac... 143 2e-33 UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu... 143 3e-33 UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacusca... 142 4e-33 UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rh... 142 5e-33 UniRef50_C3JHD6 Transcriptional regulator, XRE family n=2 Tax=Rh... 142 6e-33 UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin... 141 8e-33 UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria... 141 8e-33 UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Bu... 141 1e-32 UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr... 141 1e-32 UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Vi... 140 2e-32 UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep... 140 2e-32 UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos... 140 3e-32 UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales Re... 139 3e-32 UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ... 139 4e-32 UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin... 139 5e-32 UniRef50_A9DXP7 Transcriptional regulator, XRE family with cupin... 139 5e-32 UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Ch... 138 6e-32 UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy... 138 7e-32 UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sph... 138 8e-32 UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax... 136 3e-31 UniRef50_A6G914 Transcriptional regulator, XRE family with cupin... 136 4e-31 UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De... 136 4e-31 UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B... 136 4e-31 UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cel... 136 5e-31 UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxid... 135 7e-31 >UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax=Gammaproteobacteria RepID=PUUR_ECOLI Length = 185 Score = 245 bits (625), Expect = 7e-64, Method: Composition-based stats. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG Sbjct: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT Sbjct: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 Query: 181 TPTTF 185 TPTTF Sbjct: 181 TPTTF 185 >UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ Length = 274 Score = 201 bits (512), Expect = 8e-51, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 2/181 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 +A G++L +R+++GL+ ++ +G++ S +S IE +V+ +I+TLQKL Y +L Sbjct: 95 IAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLY 154 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF + ++ V ++E +G+ ++L+ N + + T PG E I Sbjct: 155 FFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALNEP-AMEPLLYTVAPGAGRNENIS 213 Query: 126 HQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H+GEE VL+G + + ++ + Y + G S + H + N + +TP T Sbjct: 214 HEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPPT 273 Query: 185 F 185 F Sbjct: 274 F 274 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 2/183 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G L +R+ +GLSQR A+ +G+T+S IS IE++ VSP++S+L+K+L +SL Sbjct: 26 NLDIGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLV 85 Query: 65 EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 +FFS E E +VV D+L+++G+ + KL+ PNR ++++ ETY PG+ TGE Sbjct: 86 DFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEE 145 Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + KH+GEE V+EG+ LT+ + Y L AG SY N+ +PH F N CR++SA TP Sbjct: 146 MLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTP 205 Query: 183 TTF 185 F Sbjct: 206 ANF 208 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 197 bits (502), Expect = 1e-49, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ +R+++GL+ A+ S LT IS +E++ P+I L + + G+++ FF Sbjct: 29 LGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFF 88 Query: 68 SEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 + + P++ V+ + +++ + + + P R L + + PGT + E Sbjct: 89 ASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYS 148 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G VL G L + + + L G S++ ++ PH + N ++ TP TF Sbjct: 149 HEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208 >UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Clostridiales RepID=A3DDF7_CLOTH Length = 179 Score = 197 bits (501), Expect = 1e-49, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 5/182 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G ++ ++R ++Q A+ + L+ IS IE D SP+I+TL +L+ G L Sbjct: 1 MQIGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKT 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGV--SMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FFS+ E + Q+V + D + +++ V + + I T QPG + E Sbjct: 61 FFSDSE---DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLED 117 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H+GEE G V++G I + I + Y + G+S+ + H N ++I TP Sbjct: 118 HPHEGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPP 177 Query: 184 TF 185 TF Sbjct: 178 TF 179 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 100/183 (54%), Gaps = 4/183 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GK + E+R + ++ R A+ SG + S +S +E+D +SP +++L+K+ G++++ Sbjct: 1 MEFGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITS 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FFS + + +V+ +D + +GS+ V + + + N L ++ G +G+ Sbjct: 61 FFSGDDS-ETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDD 119 Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H GEE V++G++ +T++G+ L G S N+ +PH + NT G ++ +TP Sbjct: 120 YNIHLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTP 179 Query: 183 TTF 185 TF Sbjct: 180 PTF 182 >UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio RepID=A6CYI2_9VIBR Length = 185 Score = 195 bits (497), Expect = 5e-49, Method: Composition-based stats. Identities = 96/180 (53%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK ++++R+++GLSQR AE +G+THSAIS+IE KVSP++S+LQK++ V+ LSLSEFF Sbjct: 6 IGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSLSEFF 65 Query: 68 S-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 + E ++ E +VV+ +DLIE+GS+ VSMKLV+NG+ + + + E Y P +TTG IK Sbjct: 66 TLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGASNIK 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE+GTVL GE+ L NG+ Y + AG+SY I+T IPH F+N S CR+ISAHTP F Sbjct: 126 HEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHTPKAF 185 >UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMV2_MOBAS Length = 193 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G++L +R LS ++ A G + S +S +E +V+P ++ L+KL+ G++++ Sbjct: 9 PQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGINIA 68 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 F ++ + +I +G G+ ++ + P L PG +T Sbjct: 69 FLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPGGST 128 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEEIG VLEG LT+ G + L G S+A + PH + N + R++ + Sbjct: 129 DGAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVLWVN 188 Query: 181 TPTTF 185 TP TF Sbjct: 189 TPPTF 193 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 191 bits (487), Expect = 7e-48, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 5/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G++L ++R +GL+Q AE + L+ S IS +E DK SP+I TL+++L+ G L Sbjct: 13 VRIGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKH 72 Query: 66 FFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FFS+ E E +VV +++ + + +GV +++ +G ++ + I T +PG T E Sbjct: 73 FFSDVE---EERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEE 129 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+G E G V++G I L ++ + Y L G + H N+ ++ Sbjct: 130 SYHEGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186 >UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=C3MAN4_RHISN Length = 220 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 4/183 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R LSQR A+ +G+T+S IS IE + +P++ L+++L + L+ Sbjct: 40 SVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLA 99 Query: 65 EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE- 122 EFFS EPE+P + ++L+E+G +S + + + R+L ++ E YQPG TG+ Sbjct: 100 EFFSFEPERP--RKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKV 157 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H+GEE G VL G + +T++ + L G +Y + PH F C +ISA TP Sbjct: 158 LLVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTP 217 Query: 183 TTF 185 TF Sbjct: 218 PTF 220 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 189 bits (480), Expect = 4e-47, Method: Composition-based stats. Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 2/182 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G RL +R+ LSQR A SG+T++ IS IEQ++VSP+IS+L+KLL+ ++L++ Sbjct: 22 MDTGARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLAD 81 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124 FF+ + P + Q V D ++G GV + LV P+R + + E Y PG +GE Sbjct: 82 FFTFDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPI 141 Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 +GEE G V G + LTI+GQ L G Y T +PH F N IIS++TP Sbjct: 142 VHSEGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPA 201 Query: 184 TF 185 F Sbjct: 202 NF 203 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 188 bits (478), Expect = 8e-47, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK++ ++R+++G+S + AE +GLT S +S +E+D P+I++L+K+ + + + F Sbjct: 2 LGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFL 61 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126 PE P V +Q ++ ++ +L+ NR + ++ +PG + E + H Sbjct: 62 LNPEDHS-PVVRKDQRKVLRFPQSHLTYELLSPDL-NRNMEVMMARLEPGAASCDEPLAH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VL+G + + I G+ + + G S IPH + ISA TP F Sbjct: 120 PGEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178 >UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJP6_9BACT Length = 178 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G +L EIR++ ++ ++ +G T S IS IE K SP+I++L+K+ G ++SE Sbjct: 1 MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124 F E + + D ++ +SM + + NR + I P TG + Sbjct: 61 LF---EDERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYY 117 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H GEE+G V+EG+I + I +++L G+ ++ +PH N + TP + Sbjct: 118 HHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPPS 177 Query: 185 F 185 F Sbjct: 178 F 178 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL +R +GLS + AE G++ +S IE+ +S +++TL+KL K Y L++ + Sbjct: 117 NVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDL 176 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 F + +V + S GV M+L+ GNP + PG +G E Sbjct: 177 F--DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP--VMEPHLFHVAPGAGSGDEEYS 232 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE VL G + L ++G++Y L G S+ + PH +SNT + ++ +TP TF Sbjct: 233 HEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPPTF 292 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 2/180 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R +R++ GLSQR A+ +G+T+ IS IE + VSP++++L KLL S++EF Sbjct: 4 EIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 F+ E P Q + E+G +S + + + + +R + M+ ET PG TG E + Sbjct: 64 FAVDE-PKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLA 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+G+E G +++GE+ LT++ + L G SY ++ H F NTS C I+SA++P +F Sbjct: 123 HEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182 >UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales RepID=Q3A2S3_PELCD Length = 188 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 5/185 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + L G++L +R L+Q + LT IS +E D P+I+TL+ +L V+G+S Sbjct: 2 ERNLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVS 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + EFF++P + VV D ++ + G + ++L+ G NR + T +PG Sbjct: 62 MQEFFTDPVDTE---VVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEM 118 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E+ H+GEE G VL G I + ++ + Y + + + + HS N G RI+ Sbjct: 119 EEQDFHEGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVV 178 Query: 181 TPTTF 185 TP TF Sbjct: 179 TPPTF 183 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS G+ + +R+ + L+ AE +GL+ IS IE+ + P+++ L ++ + G Sbjct: 21 MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80 Query: 61 LSLSEFFSEPEKPD---------------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNR 105 +S+S FF PE PD +V + G+ +L+ G + Sbjct: 81 VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140 Query: 106 TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHS 165 L ++ + PG+ H+GEE G VL G + L + + L AG S+A ++ PH Sbjct: 141 -LELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199 Query: 166 FSNTSAGICRIISAHTPTTF 185 + N S +I A TP +F Sbjct: 200 YRNPSETETIVIWALTPPSF 219 >UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN Length = 185 Score = 186 bits (472), Expect = 4e-46, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 5/184 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E + G++L ++R ++GL+Q A L+ IS +E+D SP+I+TL +L+ G +L Sbjct: 5 ELMNIGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNL 64 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM--KLVHNGNPNRTLAMIFETYQPGTTTG 121 +FF+ E E ++V +++D+ E ++ + V + I T +P Sbjct: 65 KDFFNNDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYK 121 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE G VL G + + + + Y G+S+ H SN + +++ T Sbjct: 122 NDEPHEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVST 181 Query: 182 PTTF 185 P F Sbjct: 182 PPYF 185 >UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile RepID=Q186J9_CLOD6 Length = 187 Score = 185 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 2/183 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G ++ +R+ + +S A+ S L+ IS IE++ V P+I + K+ K +++ Sbjct: 5 NIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALDINIG 64 Query: 65 EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-TGE 122 FF E + D VV + I +L+ + + I T T E Sbjct: 65 YFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTHKNSE 124 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H+GEE G +++G++ +T+ ++Y L G S+ N+ IPH + N +C + A TP Sbjct: 125 FVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVWAMTP 184 Query: 183 TTF 185 +F Sbjct: 185 PSF 187 >UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=Q1GM81_SILST Length = 190 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +DE L G RL +R++ LSQR A+ +G+ +S IS IE K++P++ L+++L + Sbjct: 9 ADEDL--GPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPI 66 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 SLS+FF+ E E +DL E+G VS+K V R + +++ETY+ G TG Sbjct: 67 SLSDFFAF-EPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTG 125 Query: 122 E-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+GEE G VL G I +T+ Q L G +Y ++ PH F C ++SA Sbjct: 126 RVMYGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSAC 185 Query: 181 TPTTF 185 TP TF Sbjct: 186 TPPTF 190 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+ + ++RQ + L + +E +G++ +S IE+ +V ++ +L K+ K + L F Sbjct: 14 EIGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSF 73 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 F E + V +++ V +L+ + NR + M+ T + G E++ Sbjct: 74 FEELNREKVSVVRKEDRKQLDIPRSNVIYQLLSP-DMNRKIEMLLVTLKSGEVEEHEKVT 132 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G V++G++ +T+ + L G S ++ IPH F N + A TP +F Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192 >UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYK9_9CLOT Length = 181 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 5/181 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 +++ ++R+++ L+ + + +GL+ S +S +E + S AI++L+K+ G++++ F Sbjct: 4 EIAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERI 124 F E P+ ++ +D +G + + + PNR L + T P G Sbjct: 64 F---EIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNF 120 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H GEE VLEG + + I+ +Y++ AG S + H + N S +I++ TP Sbjct: 121 SHPGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLI 180 Query: 185 F 185 F Sbjct: 181 F 181 >UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3B6_THELT Length = 185 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ E G+++ +RQ + L+ R A+LSG+T IS IE KVSP++STL+ +L G Sbjct: 1 MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60 Query: 61 LSLSEFFSEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 ++ + + +V ++ + S G++ +L+ + N +M +PG Sbjct: 61 ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLS--SKNNAYSMFISYLEPGAD 118 Query: 120 TGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + E H+G E G V++GE+ +T+ + L G S + IPH + N + Sbjct: 119 SRESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVW 178 Query: 179 AHTPTTF 185 +P +F Sbjct: 179 VVSPPSF 185 >UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=B2JW16_BURP8 Length = 234 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R Q L+ + AE +G + S +S +E +P+++TL ++ +++ Sbjct: 45 LGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIAALV 104 Query: 68 SEPEKPDEPQVVINQDDLIEMG------------SQGVSMKLVHNGNPNRTLAMIFETYQ 115 S P P ++ + + ++ + P + L + Sbjct: 105 SGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIHVLE 164 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 P + E+I H GEE+G VLEGE+ LT+ + Y L AG S+ + PHS+ N I R Sbjct: 165 PLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGDVITR 224 Query: 176 IISAHTPTTF 185 ++ +TP TF Sbjct: 225 VLWINTPPTF 234 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 182 bits (463), Expect = 4e-45, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 2/183 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E + GK++ + R + G+S R A+ SGLT S +S IE+D V+P+I TL+ + + + + Sbjct: 2 EDINLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALDVPM 61 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 +FF + E + V ++ I ++ L+ ++ + PG T+G Sbjct: 62 FKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRG-SIEFCMMSIPPGLTSGRN 120 Query: 124 IK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H GEE+ V+ G + + + G Y L G S I H + N + ++I A TP Sbjct: 121 PQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFAITP 180 Query: 183 TTF 185 +F Sbjct: 181 PSF 183 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 12/187 (6%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ +R+++ L+ R AE +G++ IS IE+ +P+ +TL +L + + + Sbjct: 19 DLGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQL 78 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGV------SMKLVHNGNPNRTLAMIFETYQPG-TT 119 E P+ VV+ +++ + G+ S +L+ N L + PG T Sbjct: 79 L---EAPESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDL-NGALEATWVVTPPGYDT 134 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIIS 178 + H GEE G VL G + ++G + L AG S + IPH + N S C I Sbjct: 135 SATPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIW 194 Query: 179 AHTPTTF 185 TP T+ Sbjct: 195 VSTPPTW 201 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R GL + A + + S +S +E VSP+I+ L ++ KV +++S Sbjct: 21 DVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNIS 80 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 F+ E+ ++ G++++ + + L PG + Sbjct: 81 GLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAAS 140 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 I+H+GEE+G V+EG + LT+ Q L AG S+ ++ PHS+ N + R++ + Sbjct: 141 DGAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVN 200 Query: 181 TPTTF 185 +P ++ Sbjct: 201 SPPSY 205 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +++ G+A G ++ +RQ+ + A +G++ +S +E+ SP+I++L + G Sbjct: 53 LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +++ F E P E + V D L + N R L I PG Sbjct: 113 VTVQYFV---ETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQ 169 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E H GEE V+EGE+ LT+ G+ + L AG S + +PHS+ NT+ ++ Sbjct: 170 KRSEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVW 229 Query: 179 AHTPTTF 185 TP F Sbjct: 230 VGTPRLF 236 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 178 bits (453), Expect = 6e-44, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 5/183 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ E+R+ +GL+ ++ A +GL+ +S +E+ P++ L + G+ ++ F Sbjct: 12 IIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWF 71 Query: 67 FSEPEK---PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122 F +P+ P+ VV S GV +L+ + L +I T+ PG +G E Sbjct: 72 FPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSGQ-LELIVTTFDPGAGSGAE 130 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+GEE G ++EG++ +T+ + L G + + IPH + N G +I A TP Sbjct: 131 LYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTP 190 Query: 183 TTF 185 + Sbjct: 191 PYY 193 >UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KY58_9GAMM Length = 219 Score = 178 bits (453), Expect = 6e-44, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 6/190 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 ++ + G + ++R+ +G++ +++S L+ +S +E+ P+I L + + G Sbjct: 31 LAKTDRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALG 90 Query: 61 LSLSEFFSEPEKPDEPQ----VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 +++S FF ++P VV + + + G+ +L+ +R + M+ T+ P Sbjct: 91 VTISWFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNL-SRQIEMLKCTFPP 149 Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 GT++G+ HQGEE G +L G++ L I L G S+A + H ++N Sbjct: 150 GTSSGDVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETV 209 Query: 176 IISAHTPTTF 185 +I TP ++ Sbjct: 210 VIWTITPPSY 219 >UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JLN2_AGRRK Length = 205 Score = 178 bits (453), Expect = 6e-44, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL RQ G++ + A + + S +S IE K SP++ L +L++V G ++ Sbjct: 23 RLGTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWM 82 Query: 67 FSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 F E + + LI + +G+S++ + +P L +PG + Sbjct: 83 FEEADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAG 142 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 I+H GEE+G +L G I L + + + L G S+ + +PH + N I +TP Sbjct: 143 PIQHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTP 202 Query: 183 TTF 185 TF Sbjct: 203 ATF 205 >UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium RepID=A5TRU5_FUSNP Length = 184 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 4/184 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G++L + R +G+S R A L+ S +S IEQ K SP+I L+K+ + ++ Sbjct: 1 MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAY 60 Query: 66 FFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + E I ++++ IE + M ++ + N + + I +G Sbjct: 61 LIEDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRD 120 Query: 124 IKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 G EE +LEGE+ + + + Y L G S + + H F NTS + + + Sbjct: 121 FYSHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVS 180 Query: 182 PTTF 185 P TF Sbjct: 181 PPTF 184 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ E R +GL+ R+ A+ +G++ IS +E+ P++ T++++ +V + L F EP Sbjct: 5 RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64 Query: 71 EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGE 129 + +E VI DD + S ++ L ++ +PG + + ++ H E Sbjct: 65 D--EETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSE 122 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E V+ G + + + Q + L G S ++ +PH F N R + + TP ++ Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 +++ +R+++ L+ + +E +GL+ S +S +E + S AI++L+K+ + ++ F Sbjct: 4 EIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F PE + V + ++ E+ + R + I G + H Sbjct: 64 FKSPELH-KFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG I+ I+G++Y + G S + IPH SN +I++ P F Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G+ + +RQ+ GLS + A +GL++ IS +E+ + P+I TL+ L + +S Sbjct: 23 DQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPIS 82 Query: 65 EFFSEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121 FF + D + ++ + L+ + + GV + + + L + T PG ++G Sbjct: 83 YFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKGQ-LELYELTLNPGASSGT 141 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + ++H GE+ G +L G + L ++ Q + L AG S+ + +PH F N + R+I T Sbjct: 142 DFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 175 bits (443), Expect = 8e-43, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 1/176 (0%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 +++ +R Q+ ++ + +E +GL+ S +S +E+ S AI++L+K+ + ++ FF+ Sbjct: 6 EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASFFAN 65 Query: 70 PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129 + ++ ++ + R L + T+ PG H GE Sbjct: 66 YSNTN-FTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQPNTFCHPGE 124 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E VLEG ++ ++G++ + G + + +PH + N +++ TP F Sbjct: 125 EFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180 >UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria RepID=B1M0W6_METRJ Length = 186 Score = 175 bits (443), Expect = 9e-43, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 6/186 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R + GLSQR A+ +G+T+SAIS IE ++V+P++ L+++L + ++ Sbjct: 2 SIDVGARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMA 61 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFETYQPGTTT 120 EFF+ +P+ ++L E+G + +S + V + R L ++ E Y+PG T Sbjct: 62 EFFALEPEPERKAFFA-AEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADT 120 Query: 121 GE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + H+GEE G VL G + +T++ + L G +Y+ ++ PH F C ++SA Sbjct: 121 GRVPLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSA 180 Query: 180 HTPTTF 185 TP +F Sbjct: 181 CTPPSF 186 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G R+ + R Q+G++ + AE SGL+ + +E DK SP++ L +L G+ ++ Sbjct: 8 MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124 E+ V N M +G+S++L+ P R+L M+ PG T G+ Sbjct: 68 LLISQEERAH-VVRANARQGYSMNGEGLSVQLLSA--PGRSLKMMLLELAPGAATGGDNH 124 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE VL+G + ++ L G S N IPH N RI+ T Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+RLS +R + GL+ A +G++ +S IE+ +P+ +TL KL + + FF Sbjct: 31 LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90 Query: 68 SEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124 E EP V+ + + +G+ +L+ R L M+ PG + Sbjct: 91 DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPH 149 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H+GEE+ +LEG + +T+ G++ L AG + + +PH F N I+ A TP + Sbjct: 150 RHEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPS 209 Query: 185 F 185 F Sbjct: 210 F 210 >UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ Length = 201 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R GL+ + A+ S + S IS IE + SP+++ L ++ +++ Sbjct: 26 LGVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALT 85 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 +E + P + + +I+ G +S++ + L PG + I+H Sbjct: 86 TEEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHV 143 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE+G VLEG + L + + + + AG ++ ++ PH + N RI +TP TF Sbjct: 144 GEEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 5/181 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G ++ +RQ+ + A +G++ +S +E+ SP++++L + + G+++ F Sbjct: 16 ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVS--MKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + P E + V + L G + + N + R L I PG E Sbjct: 76 V---DTPSEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVT 132 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H GEE V+EGE+ LT+ G+ + L AG S + +PHS++NT+ ++ TP Sbjct: 133 THAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRL 192 Query: 185 F 185 F Sbjct: 193 F 193 >UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA Length = 185 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 3/185 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D+ + G + IR ++GL + AE ++ S +S IE+ +P+++T++ + + + Sbjct: 2 DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGTTT 120 L +FF EPEK D ++ ++D + ++ + +L+ P + + T+ + T+ Sbjct: 62 LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPT-NIECMKMTFTEKNAETS 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H+GEE+ +L G++ +TI Q + G S I PH ++N +AG ++ + Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180 Query: 181 TPTTF 185 TP F Sbjct: 181 TPPEF 185 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 6/183 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + G ++ + R+ +GL+ ++ SGL+ +S IE+ SP++ ++ ++ G+ L Sbjct: 12 QKMGLGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPL 71 Query: 64 SEFFSEP--EKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 S F E P E +V+ + +++G+ GV+ +L+ + + + +PG Sbjct: 72 SWLFDNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGE-MQIYLVSIRPGGQ 130 Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +G E H+GEE G VL G + LT++ + L G S+ + + H F+N ++ Sbjct: 131 SGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVW 190 Query: 179 AHT 181 A++ Sbjct: 191 ANS 193 >UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL Length = 189 Score = 172 bits (436), Expect = 6e-42, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 2/181 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 GK++ ++R + L+ + +E + L+ +S +E+ + AI +L K+ K +SL+ F Sbjct: 4 DIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RI 124 F P+K + + + +++++ + + N +++ P + Sbjct: 64 FQAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENIISY 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H+GEE VLEG + L IN + L G S ++ I H+++N ++ R+++ HTP Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183 Query: 185 F 185 F Sbjct: 184 F 184 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 171 bits (435), Expect = 7e-42, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL ++R+Q GL+ R A +GL+ + +S IE + P+I++L+KL + + ++ F Sbjct: 25 LGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLF 84 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-H 126 EP+ P + L+ + ++ + V G + L ++ PG + E + H Sbjct: 85 HEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGD--LEVLRSVLAPGDVSAEGPRGH 142 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 E VL GE+V+TI D+ LVAG++ ++ PH + N SA I+ TP T Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200 >UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWJ8_9PLAN Length = 183 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 1/176 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L +R+ E+R GL+ AE +G+T IS IE +V+P++ TL K+ + +G+S ++ Sbjct: 4 LQLSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTAD 63 Query: 66 FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + ++ + VV ++ I + + + + + + QPG E++ Sbjct: 64 LLAGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKL 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+GEE V++G I + Y L G + + H+ N I R+I + Sbjct: 124 AHEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVY 179 >UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus RepID=Q0S834_RHOSR Length = 187 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 4/182 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 +A G + R GL+ R A +GL+ +S E P++ L ++ +V G + Sbjct: 9 AVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTAH 68 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + + V + + V L R + T QPG+ GE Sbjct: 69 ALLEQGARTPTSLVRSREGRRFALSDGAV---LRFCSTGVRAMEPNEVTAQPGSQAGEHT 125 Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 +H GEE V++G + + + + Y L G + +PH + N +A R + TP Sbjct: 126 EHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLITSTPP 185 Query: 184 TF 185 +F Sbjct: 186 SF 187 >UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UFY6_METS4 Length = 201 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 6/188 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +++ L G+++ +R+ +GL+ ++ A G++ +S IE+++ I L+++ + G+ Sbjct: 16 NEQELLLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGV 75 Query: 62 SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 LS FF P + + V + + G++ +L+ N L ++ T PG Sbjct: 76 QLSWFFQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNL-NGPLEVLLSTIAPG 134 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + + + H G E G VL G + L I + + L G S++ ++ H +N +++ Sbjct: 135 SDS-DFYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVV 193 Query: 178 SAHTPTTF 185 TP + Sbjct: 194 WIITPPHY 201 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 170 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 1 MSDEGLA---PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M D G G RL +R+ GLS + + + L+ ++S IE+D SP++ TL KL Sbjct: 15 MKDHGRNDSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLAT 74 Query: 58 VYGLSLSEFFSEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 + + LS FF++P + +VI +D +++ +QG+ L+ + L ++ Sbjct: 75 SFDVPLSYFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALD-GLQLMMVRMT 133 Query: 116 PGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 P +++G E H+G + G VL G + L + G+ Y L G S+ + PH F Sbjct: 134 PESSSGPEAYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPA 193 Query: 175 RIISAHT 181 ++ +T Sbjct: 194 EVLWINT 200 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L Sbjct: 97 QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 156 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118 FF ++ VV + L G + + +R + + + + Sbjct: 157 DHFFKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDS 216 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E +H E VL G +V+ ++G++ L AG + ++ +PHS+ I + Sbjct: 217 PPSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISSALV 276 Query: 179 AHTP 182 +P Sbjct: 277 VISP 280 >UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HHC8_PEPMA Length = 179 Score = 169 bits (428), Expect = 5e-41, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 3/181 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +R + GL+Q AE S LT IS +E+D SP++ +L LL G ++ Sbjct: 1 MEIGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMAT 60 Query: 66 FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FF + KP ++ D E S ++ + + T+ + T T E Sbjct: 61 FFMD--KPSVKEIFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYN 118 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +GEE G VLEG + ++ + Y L G + N IC++I +P Sbjct: 119 PFEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPPN 178 Query: 185 F 185 F Sbjct: 179 F 179 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 2/178 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKRL +R++Q +S R AE SGL + +S IE + SP++STLQ+L + +S Sbjct: 20 VDVGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISA 79 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124 FF+ PE P + V I ++ + G NRTL + T PG +G E I Sbjct: 80 FFT-PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAI 138 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H G+E + G+I+ T+ Q Y + G S +PH + N + + + P Sbjct: 139 IHTGQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCP 196 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 13/194 (6%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSD G RL E+R +SQR+ AE SG+ H +S IE + SP++++L+K+L G Sbjct: 22 MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVS--------MKLVHNGNPN-RTLAMIF 111 +++SEFF EP+ P PQ +L ++ S+ S M L G+ L ++ Sbjct: 80 VTMSEFF-EPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILH 138 Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 E Y+PG TGE + H G E G V+ GEI LT+ Q L AG SY + PH F N S Sbjct: 139 ERYEPGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVS 198 Query: 171 AGICRIISAHTPTT 184 ++SA TP Sbjct: 199 DREAVVVSACTPPY 212 >UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UA69_SINMW Length = 182 Score = 168 bits (427), Expect = 7e-41, Method: Composition-based stats. Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%) Query: 24 RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83 R A SG++HS IS IE+D++SP+I TL +L G +L FFS+ + + Sbjct: 20 RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79 Query: 84 DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142 DLIE+G +S +++ +PNR + M+ E Y G TGE H +E G VL G + +T Sbjct: 80 DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139 Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 + Q L G Y ++ +PH F N G ++SA TP T+ Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182 >UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YW73_BRASO Length = 184 Score = 168 bits (426), Expect = 7e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 8/183 (4%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G RL R +G+ R A++ G S IS IE KV P++ L K++ ++ Sbjct: 1 MNIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMAS 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEM------GSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 FF + D+ + V +D +++ G +GV + + L PG Sbjct: 61 FFGL--RVDDYKQVQKPEDRMKVYVDALRGGKGVVYERLVPVAAGNLLEANIHVVAPGGE 118 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + I HQGE +G ++ G I LTI+ Y + AG S+ + +S+ N RI+ Sbjct: 119 KIDLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWV 178 Query: 180 HTP 182 +TP Sbjct: 179 NTP 181 >UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN Length = 189 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 81/175 (46%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + +R + + ++ AE + L+ S +S +E+ K S + +L+K+ + G+S F Sbjct: 4 TIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 FS QV + + + + + N TL I T P G H Sbjct: 64 FSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVH 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 QG+E VLEG + + + +++ L G S +++ +PH++ N + + R + ++ Sbjct: 124 QGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 5/182 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++ + G+R+ +R ++ LS A +G++ A+S IE+ S + + L + Sbjct: 16 NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75 Query: 62 SLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 S + +P D V N + + ++G+S L+ P L + +PG Sbjct: 76 EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGG 133 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 T E H G E G V GE+ L ++ Y L G S+A + +PHSF N C I+ Sbjct: 134 T-ETYAHTGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWV 192 Query: 180 HT 181 +T Sbjct: 193 NT 194 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 166 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 7/186 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ L G+RL +IR+ LS +E SG++ +S +E+ P++ T++++ + G Sbjct: 1 MNSNHL-IGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALG 59 Query: 61 LSLSEFFSEPEKP----DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 + P++ D+ V Q + + G++ LV + + + ++ +P Sbjct: 60 VPPFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFD-AMQLMTVVMEP 118 Query: 117 GTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G+ +G +H+G ++G +L G + L ++G+ + L AG +A ++ +PH F N Sbjct: 119 GSKSGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAE 178 Query: 176 IISAHT 181 ++ +T Sbjct: 179 VLWINT 184 >UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEN9_9FIRM Length = 188 Score = 166 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G + R++Q +S + A ++ S +S IE +K P+++TL+++ G+++S+ Sbjct: 4 LGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKLL 63 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKH 126 E E + + G+ ++ + +P + + P +G+ H Sbjct: 64 GEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPYTH 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYA-INTGIPHSFSNTSAGI-CRIISAHTPTT 184 G+EI VLEG I L ++ + + G SY I+ H F N S R++ P Sbjct: 124 AGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNPPY 183 Query: 185 F 185 F Sbjct: 184 F 184 >UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS09_RUBXD Length = 292 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 5/179 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 PG+RL +R + + + +E +GL+ S IS +E+ ++++L++L + YG+++ E F Sbjct: 118 PGERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELF 177 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + + P V ++ ++E GV + + G + + + G + H Sbjct: 178 GTDLEQNSPLVRAHERPVMEWD-NGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHD 234 Query: 128 GEEIGTVLEGEIVLTINGQ-DYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE V+ G + + + Q Y + G + ++ PH + + +TP TF Sbjct: 235 GEEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWW-AGDEPVEAVYVNTPPTF 292 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G+R+ E+R + GL+ + A+ SG++ +S +E+DK +P++ TL + G+ + F Sbjct: 21 AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 S P KP + + + + + + P TL+ + G + E H Sbjct: 81 ISTP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYAS-EITAH 138 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 GEE+ VL+G + T+ + L G S PHSF+N R++ T Sbjct: 139 VGEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSP 195 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 4/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G ++ +R+ +G++ R +E++GL+ + +S IE+ +P+ +TL +L + + F Sbjct: 19 TVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDIPVGRF 78 Query: 67 FSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGE 122 F ++ P V + ++ S G ++ + + + T+ + + PG T+ Sbjct: 79 FIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGHDTSAT 138 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H GEE ++ G + ++G Y L G S ++ IPH + N+ +C I + P Sbjct: 139 PFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAIWVNAP 198 >UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7 Tax=Rhodobacteraceae RepID=Q28QP9_JANSC Length = 205 Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ A G + + R+Q L+ + + +GL+ +S +E+ + +P++ TL ++ + + Sbjct: 6 SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L F + P KP + + + + V P L+ PG + Sbjct: 66 ELEYFIATP-KPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYAS- 123 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E + H+GEEI +L GEI T+ GQ + L G S + PHS+SN + RI+ T Sbjct: 124 EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWTGT 183 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 4/186 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D L GK L+ IR+Q+GLS + AEL+G++ ++ IE+ +P ++TL K+ Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S F E + N ++E + + L N R + +PG Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNT-RRFEVFTIELEPGCNH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 ++G EE V +GE+ I Y L G + PH + NT+ I +I Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEI--VIFQ 177 Query: 180 HTPTTF 185 H F Sbjct: 178 HIIYYF 183 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 8/186 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M G+RL R+Q+GLS AE +GL+ +S +E+D VSP+I +L + G Sbjct: 1 MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTT 119 L++++ F+ P VV D G G ++ P+ + ET PG + Sbjct: 61 LAVADVFAV-----APVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGS 115 Query: 120 TGERIKHQGE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G+ + H E+ V+ G I L + Y L AG S H++ N G R++ Sbjct: 116 GGDELYHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVL 175 Query: 178 SAHTPT 183 P Sbjct: 176 WVLAPA 181 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 8/188 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS E G R+ ++R + L+ + A +G + + IS IE D VSP I+TL K+ K + Sbjct: 1 MSSE-YNIGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFD 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFET 113 + L++FFSE E +VV I E QG + + N+ + T Sbjct: 60 VKLAQFFSEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVT 119 Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 H GEE V+ G + Q L G S + + H + Sbjct: 120 LTEKAPEANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKE 179 Query: 174 CRIISAHT 181 R++ T Sbjct: 180 VRVLVVVT 187 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK+L R +GL+ + LSG++ + IS IE+ P++ L KL G+S+ F Sbjct: 6 IGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFV 65 Query: 68 SEPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125 E EK + Q + + + + G + + ++ +T + +G+ + Sbjct: 66 EEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGDAPMV 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEE VL+G + I + Y L +G S + +PH + N G ++ +P Sbjct: 126 HTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVVSPA 183 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D A G+ ++RQ QG+S R +E SG++ IS IE+D +P++ L + + + Sbjct: 10 EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69 Query: 62 SLSEFFSEP-------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114 + F + + +P + + + +L+ +G N L ++ T Sbjct: 70 PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSG-GNHNLQIMILTI 128 Query: 115 QPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 +PG T+G + + E+ G VLEGE++L+++ ++ HL G S+ ++ PH+F N Sbjct: 129 EPGGTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRP 188 Query: 174 CRIISAHTPTTF 185 RI+ F Sbjct: 189 ARILWVIGAVQF 200 >UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2 Tax=Bacteria RepID=C1ZLV1_PLALI Length = 189 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + +R+ R Q L+ + A +GLT S S +E +++P++ +L ++ G+S+S+ Sbjct: 4 VELAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSD 63 Query: 66 FFSEPEKPDEPQVVINQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 ++ + V+ + + + + + + + P+R + T G + Sbjct: 64 LVEGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRKD 123 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + H+GEE VL G++ L N + L G S + PH N R++ Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCV 180 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G ++ IR+++G + A +GL+ +S +E+ P++ +L K+ K + F Sbjct: 7 TIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALESPIIHF 66 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125 F + ++ + + + + L+ G + L M+ PG ++ + Sbjct: 67 FEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK-LGMLEVRLMPGEMAVDKFVQ 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE TV+ G + N +++ L AG S + ++ HS NT +I + P F Sbjct: 126 SEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSVNPPQF 185 >UniRef50_A5V718 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V718_SPHWW Length = 201 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 3/184 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D ++ G+ + + R++ L+ A S L+ S IS E+ K +P+I +L +L + + Sbjct: 11 TDPMMSFGELIRDRRKRLKLTLNEVALRSDLSVSFISLAERGKATPSIVSLLRLAQALDV 70 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 +S F + P+ + + D V+ + G+ N+ + PG Sbjct: 71 DISYFLAPPQTNN--ILHRAADPEYYPIDSPVTYIRLSAGHVNQKMDSFIYIIPPGPIF- 127 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 R+ GE +LEGE+ + + L G S +T ++ N +++ T Sbjct: 128 PRVHRDGESFYYMLEGELHFEVGDDSFDLGPGDSLHFDTRHSYAMRNCGEKPVKVLWVGT 187 Query: 182 PTTF 185 P F Sbjct: 188 PVLF 191 >UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3 Tax=Burkholderia RepID=Q13H28_BURXL Length = 204 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL +R QGLS A +G++ +S +E++K +P++ L++L + + L+ Sbjct: 18 DVGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTAL 77 Query: 67 FSEPEKPDEP-----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 E + +P + L E+G G+ +L+ + + L M+ G+ + Sbjct: 78 LEEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSP-HGDHDLQMMIIMLPAGSGSE 136 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E + GE+ G VLEG +VL + + L AG S+ + +PHS N S R++ Sbjct: 137 EVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMN 196 Query: 182 --PTT 184 P Sbjct: 197 TQPPV 201 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 161 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 2/182 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L GK++ R + L+ + +E G+T S +S IE+D V+P+I+TL+ + K + L Sbjct: 7 DLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKALDVPLF 66 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123 FF E E +E V N I + + + ++ + T E Sbjct: 67 MFFKE-ENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYSFTEEIG 125 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEE+ +L+G++ + I ++Y L G S I H + N ++I A P Sbjct: 126 QSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVIFAINPP 185 Query: 184 TF 185 +F Sbjct: 186 SF 187 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 161 bits (408), Expect = 9e-39, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 2/175 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G +L EIR ++ LS AA+L+G++ + + IE+ + +P +STL K+ Sbjct: 1 MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S F E + E N D +IE ++ + + + + NR + + G Sbjct: 61 VSFSFFIDEEQDELEIVDQNNIDPIIEDDAR-MKLYPIFPFDANRGFEIFTIELESGCNH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 G EE V +GE+ + I+ Q Y L G S IPH + N S Sbjct: 120 VSTPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKA 174 >UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2 Length = 184 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 1/182 (0%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G+++ R+ GL+ +R AEL+ +T S +S IE+ +P++ TL+ + + L Sbjct: 3 NINVGQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALNIPLF 62 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FF E +E V NQ I G VS +L+ + ++ E Sbjct: 63 NFFLEDTSTEELVVRANQRKKITFPESGNVSYELLSPNLDGSLELALMNLLPQTASSMEP 122 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 + H+GEEI ++EG++ L +N + L G S I H + NTS +I TP Sbjct: 123 VAHKGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFGVTPP 182 Query: 184 TF 185 +F Sbjct: 183 SF 184 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 3/176 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R+ +G + A +GL+ S +S +E+ + + + L ++ G +++ Sbjct: 21 AIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIARL 80 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 E E P V+ + +I G G + ++V P M+ T PG GE H Sbjct: 81 V-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139 Query: 127 --QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E VLEGE+ LT++G ++ L AG + + H + N A CR + A Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAM 195 >UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria RepID=B5EKJ2_ACIF5 Length = 181 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 3/174 (1%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 K++ ++R+ +G S R A + ++ SA+S IE + SP+I+TL+K+ + ++ F + Sbjct: 6 KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65 Query: 70 PEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KH 126 E P ++ + D S++ + G P + + + +PG GE Sbjct: 66 GETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTSA 125 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 +GEE V+ G +G L G + + +PH++ N ++ Sbjct: 126 EGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 7/182 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G+++ ++RQ+Q L+ + +ELSGL+ +S IE D+V+P I+TL K+ K + + Sbjct: 12 ELRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIH 71 Query: 65 EFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 FF E E + Q + G + + G ++ + ++ Sbjct: 72 YFFEEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTE 131 Query: 119 -TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +H G E +LEGE+ L G S ++ PH + + + Sbjct: 132 WDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAV 191 Query: 178 SA 179 + Sbjct: 192 AV 193 >UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6V3_PAESJ Length = 182 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 5/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G + IR+++ ++ + E +GL+ +S +E +K SP+I+TL+ + + L+ Sbjct: 1 MDIGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAY 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 + K ++ Q+V I + G V + + + + M+ PG +TGE Sbjct: 61 LLLD--KKEKMQIVRKDGRRI--TTSGPDKLKVSHLSSTKNVHMMIVELPPGASTGENHA 116 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHT 181 H+GEE+ V++G I + L AG S++ N PH+ N + IS +T Sbjct: 117 HEGEEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVYT 173 >UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Sagittula stellata E-37 RepID=A3JX32_9RHOB Length = 174 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 9/174 (5%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 +SQR A +GLT SAIS IEQ+K SP++++L++LL ++LSEFFS E+ P+ Sbjct: 1 MSQRDLAGRAGLTSSAISLIEQNKSSPSVASLKRLLDAIPMNLSEFFSVVEQRKTPKYFY 60 Query: 81 NQDDLIEMGSQGV-------SMKLVHNGNPNR-TLAMIFETYQPGTTTG-ERIKHQGEEI 131 D+ IE+ Q + + L G+ +R +L ++ ETY G+ TG E ++H+GEE Sbjct: 61 APDEYIELSPQDIGLGVGAARVSLRQLGDASRHSLQVLHETYPAGSDTGPELLRHEGEEA 120 Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G V+ G I +T+ Q L G Y ++ +PH F N S C +ISA TP TF Sbjct: 121 GIVVSGLIEVTVADQIRVLNPGDGYLFSSQLPHRFRNISDAPCVVISACTPPTF 174 >UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas aeruginosa group RepID=A4XQJ4_PSEMY Length = 188 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+RL R+ G + + A +GLT S +S E++ ++S+L + K + L+ Sbjct: 5 RIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVL 64 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F +P +P +P +N+ +G Q ++ + + + P ++ + G + E I H Sbjct: 65 FDQPAQP-QPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVGYQS-ELIAH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +G E VL G IV TI G+DY L G S + G H +N++ +++ T F Sbjct: 123 EGVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181 >UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci RepID=C1XM81_MEIRU Length = 186 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 4/177 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R +GL+ + A+ SGL S IS +E++ + ++++L K+ + F Sbjct: 12 IGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQPGSLF 71 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + P V + G GV ++ G + + E G E Sbjct: 72 ---DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKEPYSFP 128 Query: 128 GE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 + ++ TVLEG + TI Y L G S + PH++ N ++ +P Sbjct: 129 SDTDVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVLSPA 185 >UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae RepID=B9JGR0_AGRRK Length = 272 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 3/179 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G++L +R G + + A G+T S +ST+E+ + TL L YG ++S Sbjct: 96 IGRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLS 155 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 E + + + + GV+++L+ G + PG T+ +H Sbjct: 156 GEEREDVPVLIRSGEWRAWPETTPGVTVQLLAEGRT--MMDCHRFVLAPGATSEGAYRHD 213 Query: 128 GEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE +L G + L ++ Q + L+ G S + HS+ N G ++ +TP TF Sbjct: 214 GEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPTF 272 >UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO Length = 190 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 5/188 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + DE G L +R+ +GL+ AE G + +S +E+DK P+IS L+ + KV Sbjct: 5 LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64 Query: 61 LSLSEFF-SEPEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPG 117 +S+S F P E ++ MGS +G+ +L+ + M+ T++PG Sbjct: 65 VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELLSPDLTD-DFEMVHSTFEPG 123 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + E + +E+ +L G + + IN + + G S+ I +SN A I Sbjct: 124 SRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIRGE-AFRWSNPYAEPAVAI 182 Query: 178 SAHTPTTF 185 P + Sbjct: 183 WVIAPPVY 190 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 5/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L Sbjct: 11 QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 70 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118 FF+ ++ +V + L G + + +R + + + + Sbjct: 71 DHFFNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDS 130 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E +H E VL G +++ +NG++ L G + ++ +PHS+ + I I Sbjct: 131 PPSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAIV 190 Query: 179 AHT 181 + Sbjct: 191 VTS 193 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + K +++ R++ LS + A +G++ + +S IE+ + +P I+TL K+ Sbjct: 1 MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +SLS+ S ++ I++ D+I + + VS+ + N+ M QPG Sbjct: 61 ISLSQLTS---TSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKM 117 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 H G EE V +G + + ++G+ Y + Q++ N+ +PHS+ N I + Sbjct: 118 HSDPHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVAL 174 >UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3I6C0_9BACI Length = 182 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G ++ ++R++ +SQ A LT S IS IE K +P++ TL K+ +++ + ++ Sbjct: 4 LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMAW 63 Query: 66 FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 F + + V + + +E G +L+ N + + T G Sbjct: 64 FVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLALY 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+ +E ++ G I+L + + YHL G S + H F N S+ ++++ + Sbjct: 124 THENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIY 179 >UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGH2_9BACT Length = 196 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 5/184 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + G+R+ +IR ++GL+ + A +G + + IS IE + V P I+TL K+ KV Sbjct: 1 MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDD----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 + ++ FF E E + V+ +D E G + + L ++ T +P Sbjct: 61 VKMTYFF-EEEINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKP 119 Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + H+G E V+EG + + + L AG S A N+ IPH+ + Sbjct: 120 DKRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALV 179 Query: 177 ISAH 180 + AH Sbjct: 180 LCAH 183 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 LA G+R+ + RQ ++ + + G++ S +S IE+D P + TL ++ +S+ Sbjct: 11 PLALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSID 70 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 F + P + D + + + + P L PG + E + Sbjct: 71 HFIATPRQAD-SVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYES-ETV 128 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA----- 179 +H GEE+ VL+GE++ +NGQ + L G S PHS+SN S R++ Sbjct: 129 QHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLLWTGKMLH 188 Query: 180 -HTPTTF 185 TP+++ Sbjct: 189 GATPSSY 195 >UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB Length = 229 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 3/182 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + L G RL R+ Q ++ ++ + ++ S +S IE DK P++ +L + G+ + Sbjct: 24 DQLRIGPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDI 83 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121 + F + E PDE + + + + V +++ + + + L P + G Sbjct: 84 TTFLTL-EIPDEFLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGG 142 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H+GEE+ V++GE+ +T+N + G S + H++ N S +I +T Sbjct: 143 PSMSHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINT 202 Query: 182 PT 183 P Sbjct: 203 PP 204 >UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5 Tax=Actinobacteria (class) RepID=A0JT75_ARTS2 Length = 191 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ +A G R+ RQ Q L+ + A+ +GLT +S +E+D SP++++L L +V + Sbjct: 9 SNIPVAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSI 68 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S+ + F+ PE + ++ I +G +G+ +L+ + R + G Sbjct: 69 SIGDLFAAPETHLTKK---DEGPRISLGGEGIIERLLTARSERRVQIIQAVIEPRGRGES 125 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + ++ V+ G I L + ++Y L G + PH++ N + ++ Sbjct: 126 ELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLWVL 185 Query: 181 TPT 183 P Sbjct: 186 VPA 188 >UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium RepID=Q8RFX4_FUSNN Length = 199 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 3/185 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 ++ + G + IR+ + L + A G++ S +S IE+ +P+++T++ + +V + Sbjct: 16 NKEINVGITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLEVP 75 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGTTT 120 L +FF + EK ++ +DD + ++ V+ +L+ + + + T + T+ Sbjct: 76 LFKFFMDLEKEKYEFHLLKKDDRKIISTEYVTYELLSP-DVETNIECMQMTLIGKNAETS 134 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + + H+GEEI +L G++ LTI L +G S I + +PH ++N +I + Sbjct: 135 VKPMAHKGEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIFSV 194 Query: 181 TPTTF 185 +P F Sbjct: 195 SPPEF 199 >UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8Q5_9ENTR Length = 199 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + G RL +R+ +G+ AE G++ S IS +E++ +I+TL K+ +V G+ Sbjct: 15 NTPDFNVGIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGI 74 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + ++ F + P V Q I +G + + L+ G + + + E G + Sbjct: 75 TPAKLF---DPPSTSFVPAGQGTPISLGGEKMREYLISGGVNDDMMVLYSEIDPLGGSGA 131 Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISA 179 E + ++ VL GE+ + + Q Y L G + +PH++ N S +C I Sbjct: 132 EPYTLNAAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWV 191 Query: 180 HTPT 183 P Sbjct: 192 IVPP 195 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 158 bits (400), Expect = 8e-38, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D L G++++E+R++Q LS R A+L+ +T S +S IE+ +P++++L+ + Sbjct: 1 MND--LNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58 Query: 61 LSLSEFF-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + L FF SE +K + N+ +I GS+ V +++ + L P T+ Sbjct: 59 VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSG-NLEFAIMDLAPNTS 117 Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + +RI H G+EI VLEGE+ L ++ ++ L G S + G H + N S ++I Sbjct: 118 SCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIF 177 Query: 179 AH 180 A Sbjct: 178 AV 179 >UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14Q08_SPICI Length = 177 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +RQ+ L+ A LT IS +E+D SP+I TL+ +L+V G +L++ Sbjct: 1 MLLGEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLAD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF + + V ++ ++ ++ + L I +P + + Sbjct: 61 FFK---QEKNRKFVYAAEEHYKVEQNNYRIEWLVPNAQVNELEPILIQIKPQGESERILP 117 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +G+ G VL+G +++ + S+ + H N + I ++ TP F Sbjct: 118 FEGQIFGYVLKGTVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL ++R+++G++ A +GLT +S IE K+ P I+TL ++ + G ++ FF Sbjct: 5 IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIGCDMAYFF 64 Query: 68 SEPEKP---DEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + D+ V+ D+ S G + + + ++ + T+ Sbjct: 65 QSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFTFPAELQG 124 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 +HQGEE+ VL G +V I G++ L AG S ++ +PH + A ++ H Sbjct: 125 DTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQAQALVIIH 184 >UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAK2_OLICO Length = 202 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G+R+ RQQ+G+S + A +GLT S +S +E+ P+I+T K+ +V+G ++ + Sbjct: 22 SLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQL 81 Query: 67 FSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 E +V + L G +++ + + P++ + + R Sbjct: 82 LGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEE+ VL G+I + + L AG + N+ PH + + Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVVV 198 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 1/175 (0%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ +R+Q L+ A +G++ +S IE+ + P+I++L + + G+++ F Sbjct: 1 MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 P + ++ V + L + G E H Sbjct: 61 GAPGDAPT-ACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHT 119 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 GEE V+ GEI LT++ + L AG++ + + H++SN + I+ P Sbjct: 120 GEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWVGAP 174 >UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEW8_9RHOB Length = 202 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 7/182 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G L R+ QG++ R AE +GL+ IS E+D P++S+L+K+ +V G+SL + Sbjct: 16 IGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGVSLQDIL 75 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 PE + + + G ++ + + P TL+ + PG + E Sbjct: 76 --PETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHRS-EL 132 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEEI VLEG + + ++G+ L G S ++ PH+ N + I I+ T Sbjct: 133 QSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILHVCTID 192 Query: 184 TF 185 F Sbjct: 193 VF 194 >UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD Length = 189 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%) Query: 1 MSDEGLA--PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M+ E L+ G+RL IR +G++ + A+ +G++ + IE+ + +P +STL K+ Sbjct: 1 MNKEMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATG 60 Query: 59 YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPG 117 +S + F E VI +D ++ + + + + ++ + + G Sbjct: 61 LHVSFTAFI---EDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAG 117 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 T QG E V +G + + I + Y L G H + N S+ Sbjct: 118 TDHTSEGHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEA-- 175 Query: 177 ISAHT 181 T Sbjct: 176 -CVFT 179 >UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K5_PELCD Length = 188 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 3/180 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK+L IR + L+ + +E + ++ + IS IE+ +P++ L +L V+ S++ F Sbjct: 7 IGKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFV 66 Query: 68 SEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124 E E E + + +Q + + G + + +P T+G+ + Sbjct: 67 EEVENTHEIVHSRPGERSCTVFDDNQNLRTESFTAGLRDPQFTSFYCVIKPHGTSGDADM 126 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H G+E+ VL+G + +T+ G+ + + G+S + + +PH ++N S ++ +P T Sbjct: 127 FHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWVLSPFT 186 >UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8G1_9GAMM Length = 184 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 3/179 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+RL IR+ +GLSQR A+ +G+T+SAIS IE ++VSP++S+L+K+L G+SL+E Sbjct: 1 MDIGERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSLTE 60 Query: 66 FFSEPEKPD-EPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGER 123 FFS +K + QVV D+L+++ V+ KLV + R++ + +TY + + Sbjct: 61 FFSIKQKDKLDYQVVYRSDELLDVSLDEVTTKLVGKHFLKERSMGLTLQTYPVASRAEVK 120 Query: 124 IKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 Q E+ G V++GE+ L I G+ + LVAG S+ + H F N G ++S T Sbjct: 121 ATSQISEKAGYVIKGEMTLEIQGEVHPLVAGDSFYFESHFAHRFINQGRGEALLLSVQT 179 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G+++ +RQ+Q L+ + A+++GL+ +S IE D+V+P I+TL K+ K + + Sbjct: 11 EMKLGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIH 70 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQ----------GVSMKLVHNGNPNRTLAMIFETY 114 FF E D + ++ + + +GSQ G K + G + + + Sbjct: 71 YFF--EEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEF 128 Query: 115 QPGT-TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 + H+G E +L+GE+ + L AG S + PH + + Sbjct: 129 EQRAWDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVR 188 Query: 174 CRIISA 179 R ++ Sbjct: 189 ARAVAV 194 >UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae RepID=A9BI07_PETMO Length = 178 Score = 155 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 5/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +R + ++Q A S LT IS +E+D SP + L+ +L+ G L + Sbjct: 1 MQIGEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FFS E + ++V ++D I + GV +L+ + + + +PG +T Sbjct: 61 FFSNLENKE--KIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIE 118 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN-TSAGICRIISA 179 H+G E+G V+EGEI L +N + Y + +++ + H N +S +I Sbjct: 119 KPHEGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSSTNSATLIWI 175 >UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax=Micrococcaceae RepID=A9WLK2_RENSM Length = 191 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 4/180 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G R+ RQ Q L+ AE +GLT +S +E+D SP++++L L +V +S+ Sbjct: 12 PVQIGSRIRAARQAQRLTIEHVAEATGLTKGFLSRVERDFTSPSVASLVTLCEVLAISIG 71 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + F P V + + +G +G+ +L+ + R + E G E Sbjct: 72 DLFVAPSTH---LVRAAEGPRVSLGGEGIIERLLTERSERRLQVLHAEIKPFGKGEDELY 128 Query: 125 KHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 E ++ ++EGE+ L + Y L G + + PHS++N S I R++ TP Sbjct: 129 TVDCEVDVLHIIEGELTLRFTSESYELSTGDTLSFPGREPHSWTNYSDKIVRVLWILTPA 188 >UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDG4_BREBN Length = 185 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 2/176 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G+ + IR+++ LS + +E++G++ + + IE+ K +P I+TL K+ Sbjct: 1 MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LS S S+ KP+ V + + I + + NP + + T +PG Sbjct: 61 LSFSSLISQY-KPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G EE V EG + + +N Q Y + + PH + N I + Sbjct: 120 IAEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVK 175 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G ++ E+RQ+ L+ + A +GL+ +S IE +KV P ++TL +L + ++L Sbjct: 15 AFNIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALG 74 Query: 65 EFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 FF E + D + ++ + E G + N+++ + P Sbjct: 75 HFFQESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEF-PT 133 Query: 118 TTTGE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 E + H+GEE V+EG++ + L G S I + + HSF R Sbjct: 134 QEKEEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETAR 193 Query: 176 IISAH 180 ++ Sbjct: 194 ALAVV 198 >UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BG67_9GAMM Length = 181 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 2/176 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKRL E+R++ G+SQR A+ G+T+S IS IE++ VSP++S+LQK+L ++L E Sbjct: 1 MNVGKRLQEVRKKAGISQRELAKRVGVTNSTISMIEKNNVSPSVSSLQKVLSGMSMTLLE 60 Query: 66 FFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FF E PQ+ DD ++ S V +L+ PNR L + ET+ PG R+ Sbjct: 61 FFEAEDNDIYVPQINYTDDDFQDVSSSQVRRRLLGQYFPNRKLEFVSETFPPGAERRIRL 120 Query: 125 KHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + G++ G V+ G++VL + + L G + + H F N ++I Sbjct: 121 GVESGDKAGMVISGQLVLILGERTVVLEPGNGFYFESSDVHFFRNEGDTSAQLIVV 176 >UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IK40_BORPD Length = 219 Score = 155 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 7/183 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G++L ++R+Q GLS + A+ G++ +S +E+ SP++ + L +G+S+ Sbjct: 29 DFWLGQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSVD 88 Query: 65 EFF----SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + +++ +G+ ++ R+L + PG +T Sbjct: 89 SLLRGTGQGGGEAAGRVARAGTHRRVDLLDKGIHKEMYTPP-AGRSLDLCRARIAPGGST 147 Query: 121 GERIKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ + GE+IG VL+G + L + Q L AG S+ + P + N + + +I Sbjct: 148 GDDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVIW 207 Query: 179 AHT 181 A + Sbjct: 208 AIS 210 >UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli RepID=A5IRY5_STAA9 Length = 179 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 3/177 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G ++ +R+ + L+Q AE + L+ IS IE + SP++ T +++V G + SE Sbjct: 1 MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSE 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FF + E +E + ++ +I +G + + + + + + T +PG + Sbjct: 61 FFKDSE--NEKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDMEPLILTLKPGASYKNFN 118 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + + + G+I L + + Y H SN S RI+ T Sbjct: 119 PSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVAT 175 >UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella bronchiseptica RepID=Q7WMB8_BORBR Length = 172 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 4/175 (2%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 + +R SQR A +G+TH+ ++ IE+ ++ P++ TL+ LL G+S+ +FF Sbjct: 1 MQALRVSLSFSQRELARRAGVTHTTVAAIEKGRIDPSLGTLKSLLAACGVSMGDFFRSD- 59 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQGEE 130 V + + + + GV M+ V P + L + E Y G TG + ++H+G+E Sbjct: 60 --RVESAVTEKHKISTVSTGGVHMRYVAPAQPGKLLQLTQELYDVGADTGQKPLRHEGQE 117 Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G V+ G L + + + L G SY ++ PH N II+A +P +F Sbjct: 118 GGIVIRGTFELQLGDERHILKPGDSYYFDSTTPHRIRNIGEEEGEIINAASPPSF 172 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 5/172 (2%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L R++ GL+ AE +GLT S +S +E+ +P+I+ K+ +V + + FS+ Sbjct: 5 LRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLFSDSM 64 Query: 72 KPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQG 128 + + +V +D +I+ + Q + + + P + G + H G Sbjct: 65 EGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPF--VVHPASVMGPKFMDHTG 122 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 EE V G + I GQ HL AG S + PH + SA ++ Sbjct: 123 EEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVV 174 >UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales RepID=A8I9H1_AZOC5 Length = 216 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 2/176 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G L ++RQ++G++ R A S LT +S +E+ +P+I+ L ++ G+++++ Sbjct: 27 RLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQL 86 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET--YQPGTTTGERI 124 F P + D + + + + + T ++PG R Sbjct: 87 FDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRW 146 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEE V+ G + + + +D L G S I H + +++ Sbjct: 147 AHGGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 3/179 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E G+++ +R ++ L + + L+ +S IE+ +V P + TL ++ V+G+ L Sbjct: 11 ESYRIGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGL 70 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQG---VSMKLVHNGNPNRTLAMIFETYQPGTTT 120 FF E + P V + + + + + +R + + P Sbjct: 71 EHFFEEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA 130 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E +H+G E+ V+ G + + I+ + L A S + PHS+ S + Sbjct: 131 SEPHEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189 >UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I731_AZOC5 Length = 231 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 5/188 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ A G + E R +GLS +R A+ +GL+ +S +E+ SP++ L+ + G+ Sbjct: 45 SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104 Query: 62 SLSEFFSEPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 ++ F E P + Q +++G++G+ + + + TL ++ PG Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSD-LSTLQIMEIILAPGG 163 Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++GE H GEE G V+EG + L I+G + L+ G S+A + +PH F N S G+ R++ Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223 Query: 178 SAHTPTTF 185 TP + Sbjct: 224 WITTPPVW 231 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L K L IR+++ LS + ++L+G++ + I IE+ + SP ++T+ K+ Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119 +S + + P +PD ++ N ++ S + +R + + G Sbjct: 80 VSFTSLINNP-QPDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKL 138 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + E K EE TV EGE+ + IN Y L +G + PH++ N + R+ Sbjct: 139 SSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRL 195 >UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRJ5_MYCS2 Length = 189 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 5/177 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL + R+++G+S A + +T +S E+ + ++ L ++ G+ + + F Sbjct: 5 GARLRQFRRERGMSLTDVAAKAEVTKGFLSLAERGMTNVSVPVLMRICDALGIGIGDLF- 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E P P V +EMG GV +L+ + + ++ +PG +G + Sbjct: 64 --EYPAAPIVRSGAGAPLEMGGHGVREELLTPKTEHH-VQVMRTVMRPGGGSGGAYRLDA 120 Query: 129 EEIG-TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 I VL G + +T++G+ L G H + N +AG ++ P Sbjct: 121 ATIVAYVLRGALSITVDGETVVLNVGDCLTFGAKQLHDWHNPTAGEAEVLWTIAPPV 177 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 LA G+RL +RQ +GLS + A +GL+ +S +E+ SP++ L +L + + L+ Sbjct: 23 DLAMGRRLRALRQARGLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLA 82 Query: 65 EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122 F P EP V + + + G++ +L+ + L++ PG +TG E Sbjct: 83 SLFGAAPGPAEPIVTRPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDE 142 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAHT 181 + H GEE G VLEG + L + L AG S+ + PH + N S ++ + Sbjct: 143 ALTHGGEEAGLVLEGRLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNA 202 Query: 182 PT 183 Sbjct: 203 VP 204 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + LA G R+ + RQ +G + + AE +G++ I +EQ +P++ TL ++ G+ Sbjct: 12 TTLSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGV 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L P + + QG LV + + T PG G Sbjct: 72 GLPALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHG 131 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179 G E+ VL G + + ++G L AG S + HS++N R ++ Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAV 191 Query: 180 HTP 182 P Sbjct: 192 FGP 194 >UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia multivorans RepID=A9ABP2_BURM1 Length = 281 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + G+R+ +R++ + A + L+ +S +E+ +IS+L + K Sbjct: 1 MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + L +P + +P + + + + + L + G + Sbjct: 61 VPLGALIDQPRQA-QPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRS 119 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H G+E VL G I TI +DY L G S + H +N G +I+ Sbjct: 120 -EWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178 Query: 181 TPTTF 185 T F Sbjct: 179 TLPLF 183 >UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4Z4_CLOK5 Length = 179 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ E+R ++GL+ + +E +GL+ +S E+ + A+ L + V + ++ Sbjct: 1 MNIGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINY 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GER 123 FF + EK ++ + D K + ++ L+ P + Sbjct: 61 FFDDEEKE---LIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYPDI 117 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 HQGEE VLEG + L I+ + L G S + H++ N + + + I+ H P+ Sbjct: 118 YAHQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITVHYPS 177 Query: 184 T 184 + Sbjct: 178 S 178 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 3/175 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ E+R +GL+ ++ A + ++ S +S++E+ + +P + L ++ G+SL+E Sbjct: 6 ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLGVSLAEL 65 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 +EPE D ++ G ++ P I T PG G + Sbjct: 66 VAEPEDRRVIVRRAADQDTVD-EPGGWHRSILTPVVPGVNFEWIRTTLPPGCDAGRFPAY 124 Query: 127 Q--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E V G + LT+ Q L G S H + N C A Sbjct: 125 AQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYVA 179 >UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Comamonadaceae RepID=A1WEC3_VEREI Length = 229 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 6/183 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G++L RQ GL ++ A G++ S +S +E+ S ++ TL L + L + Sbjct: 43 DLWLGEQLRRRRQALGLPLQQVARACGISVSLLSQLERGLRSISMRTLGALAQELRLPIE 102 Query: 65 EFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + + I++G +G+ + + + + M PG +T Sbjct: 103 TLVRNTRYSEGEAEGAVARAGTHRRIDLGDKGIHKENLTPPAASGGVQMYRAVIDPGGST 162 Query: 121 GE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ + H+GE++G V+EG++ L + + L AG S+ + + N I+ Sbjct: 163 GDDLFLTHKGEQVGYVIEGQLDLFVQERLLKLKAGDSFCYGGDMSRRWRNPGQTSTTILW 222 Query: 179 AHT 181 A T Sbjct: 223 AIT 225 >UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LFU9_RALME Length = 212 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 8/181 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + +RL+E+R+ GL+ A+ + LT S +S +E+ SP I T+ KL G+++ + Sbjct: 29 SIAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQL 88 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + + +E + I D I G + + + P++ + P T + Sbjct: 89 ITRSSRANEI-LHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMV-PPFTLEED 146 Query: 123 RI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + H GEE+ V+ GE+ + + + + AG S N IPH + + + Sbjct: 147 QPMASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVV 206 Query: 181 T 181 + Sbjct: 207 S 207 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 6/181 (3%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + L G+ + +R+ + L+ AA +G++ S ++ IE+ V+P IS L K+ Y +S Sbjct: 4 NINLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS 63 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMK--LVHNGNPNRTLAMIFETYQPGTTT 120 + E E VI D+ + G + V + + +PG Sbjct: 64 FTSLV---ETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCL 120 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 R G EE T+ G+ V+ GQ++ L G S H + N G + Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMV 180 Query: 180 H 180 Sbjct: 181 I 181 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 4/166 (2%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 ++ + A S L+ + +S IE+ K +P+ +TL +L + + FF +P P V Sbjct: 1 MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60 Query: 81 NQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGEEIGTVLE 136 + S G ++ + N + + PG T+ H GEE G V+ Sbjct: 61 GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120 Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 G+I + ++G+ + L AG S + PH + N C I TP Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTP 166 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 6/183 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M G+ L IR+ +GLS AEL+G++ + + IE+ +P IS L +++ G Sbjct: 1 MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +S + E E V++ DD+ + + + N PG Sbjct: 61 ISFTTLIEEAETE---VTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGC 117 Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G + G EE V +GE+ L + Y + AG S + PH + N + Sbjct: 118 DHGSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFY 177 Query: 178 SAH 180 + Sbjct: 178 TII 180 >UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RH93_9CLOT Length = 184 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+++ ++R+++ L+ + AE +GL+ IS +E+ V P++S+L+K+ + G+S Sbjct: 2 VGEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP-YLL 60 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP----NRTLAMIFETYQPGTTTGER 123 + + V +Q +I+ + ++V + ++ + F+ G + E Sbjct: 61 VDQSEHHPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H EEI +L+GE + + YHL AG S + +PH NT TP Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFCVMTP 179 >UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY07_9RHOB Length = 213 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 5/182 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+R+ ++R+ +GL+ + A+ SGL S IS IE+ ++P L + G+ ++ Sbjct: 22 ELGQRIRQLREARGLTLQTIADRSGLAISTISKIERGLMAPTYDRFSGLARGLGVDVTHL 81 Query: 67 FSEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGE 122 FS + E V + + ++ + +++ + + + T +P + Sbjct: 82 FSPGGRRFEAGTVALARAGEFGFLETENYAYEMLFPDVRGKAMIPMCGTLKPLQKMSFER 141 Query: 123 RIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H GEE V+ G +V+ + G ++ L G S ++G H ++ RI+ T Sbjct: 142 MVNHPGEEFLMVMSGRVVVQLEGREEIVLDTGDSLYFDSGRGHLYAAEGDEGARILVVCT 201 Query: 182 PT 183 Sbjct: 202 AP 203 >UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI Length = 178 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GKRL E+R +G+S R A+ +G++ + +S IE+ P++STL+ L V+G S++ F Sbjct: 2 LGKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALF 61 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126 +P P + I VS + + +G N + ++ + PG + I H Sbjct: 62 RDPAAPSVWLSRPGERTQITGPKGTVSYERLTHG--NAPMEVLRAVFVPGQYSVAGTISH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 E V+ G + + + G + + A ++ + H + N A I+ + TP Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTPPI 177 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 79/175 (45%), Gaps = 10/175 (5%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G+ + +IR+++ L+ ++ AEL+ L+ +S +E +K ++T++ + + S+ Sbjct: 1 MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF E D++ Q + + + + +PG T E ++ Sbjct: 61 FFYEHASLM---------DVLNAKRQSFYYEQLAY-DKGSPFIPLKVKLKPGNTDLEYVQ 110 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H G E L+G + ++++ + L G+S + PH + N + + + + Sbjct: 111 HDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVIN 165 >UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWR1_9CLOT Length = 204 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 16/195 (8%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G ++ +R Q+ ++ + +E + L+ +S +E+ S A +L+K+ V + L+ F Sbjct: 4 NIGAKIKRLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLEKIADVLEVDLTYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F +P++ + + + ++ E+ + + ++ + PGT + + Sbjct: 64 FMKPKEHKKTVIRSYEKEVFEITDGKYINYHLSSNLTDKIMFPKLIEILPGTAESDGFNY 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAI------------NT---GIPHSFSNTSA 171 GEE VLEG + L + + L G S ++ HS N + Sbjct: 124 SGEEFIYVLEGILTLNMAESEVDLYPGDSIHYSYKNKVMLKNGEDSKIVNQNHSLLNKTN 183 Query: 172 GICRIISAHTP-TTF 185 + ++I P F Sbjct: 184 KVTKVIIVSVPNPYF 198 >UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UR68_RHOBA Length = 233 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 3/175 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + +RL ++R +G++ A+ SG T S +S +E +++P++ L L G+S S Sbjct: 53 VELAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSS 112 Query: 66 FFSEPEKPDEPQVVIN--QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + + V + + + + + + +RT+ P E Sbjct: 113 LLEGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKI-PSGEEREP 171 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H+GEE TVL+G + Q++ L G S ++ + H +N A +I Sbjct: 172 RTHEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVIC 226 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 5/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R+ LS R AE SG++ +S +E+ + SP + ++ L LS+ Sbjct: 11 AIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQL 70 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GER 123 E+ V + + G +++ P + + PGT T G+ Sbjct: 71 LRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDP 130 Query: 124 IKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+ E + G +VL +G Y L AG + + +PH F N +++ + Sbjct: 131 PVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVS 190 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 6/183 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E G +L +RQ + + + E +GL+ + +S IE+ +V P ++TL ++ V+G+ L Sbjct: 27 EAYRIGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGL 86 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118 FF E ++V Q D +++G + + + + Sbjct: 87 DHFFGPGEDAPVLEIV-RQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEFSGNG 145 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + H G E+ V+EG + L I+G+ L G S + G HS+ CR + Sbjct: 146 SESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALV 205 Query: 179 AHT 181 + Sbjct: 206 VVS 208 >UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF Length = 180 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 73/176 (41%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKR+ +R + L+Q E + LT IS +E+D SP+I TL +L+V G + + Sbjct: 1 MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF E E + + E +G +K + + + + + + + Sbjct: 61 FFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E VL+GE+ + + +Y G++ + H N S +I T Sbjct: 121 SLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSNEQATLILVAT 176 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D+ G+ + IR+++ +S + A SG+ +S IE+D +P++ TL ++ + + Sbjct: 3 ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62 Query: 62 SLSEFFSEPEKPDEP----------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111 LS F ++ +++ G+ ++ +++ R L + Sbjct: 63 PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQR-LQFMV 121 Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 QPG T+G + E+ G VL+G L ++GQ L G S+ + PH F N Sbjct: 122 LNIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181 Query: 171 AGICRIISAH 180 I+ Sbjct: 182 DEPASILWII 191 >UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026G4_SOLUE Length = 225 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 6/185 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G++L ++R ++ ++ +GL+ S +S +E K+ P ++TL ++ V+ + L Sbjct: 39 AYDIGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLE 98 Query: 65 EFFSEPEKPDEPQVVINQD-----DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 FF +V + + + + + ++ L + P Sbjct: 99 HFFGNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRA 158 Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + H+G E+ VLEG + + G+D+ L G S ++ PHS+ + R I Sbjct: 159 ADVQEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIV 218 Query: 179 AHTPT 183 TP Sbjct: 219 VTTPP 223 >UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum RepID=A6X8F8_OCHA4 Length = 202 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ RQ GL+ +E+SGL+ A+S IE+ VSP + TL + +V +S ++ Sbjct: 22 DIGARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMSPAQL 81 Query: 67 FSEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 V+ + E+ + G +K + T+ PG ++GE Sbjct: 82 IDPQGFAAAARANPYVLRAGEQPEVLNAGGVIKHRASPELIETMKSFAVRIIPGGSSGEE 141 Query: 124 -IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H GEE+G V+ G L I Y L AG +A+ + H F N ++ + P Sbjct: 142 CYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGEAEAFVLWVNKP 201 >UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S464_9ACTO Length = 214 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ R+++GL+ R A SGL+ +S +E+ S ++ L + K S+++FF Sbjct: 28 VGGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFF 87 Query: 68 SEPEKPDEPQV---------VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 + V + + S + +++ + P+ L + PG Sbjct: 88 DAGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGG 147 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H+GEE V+ GE++ + G ++ L G S + + +PH N + + ++S Sbjct: 148 RRENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDAVTTVVS 207 Query: 179 AHTPTTF 185 TP F Sbjct: 208 VVTPRLF 214 >UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales RepID=A1BBT3_PARDP Length = 184 Score = 150 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+ + +R+ +G++ A G + +S +E+ + +P++ L ++ G+++S FF Sbjct: 5 VGEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFF 64 Query: 68 -SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 S P+E +V+ D +GSQ G+ +L+ + MI T+ PG ++G R Sbjct: 65 RSSSRAPEERGLVLRAADRTPIGSQESGLVEELLSPTLSG-SFEMIKSTFAPGASSGGRR 123 Query: 125 KHQGEEIGTVL-EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 K + +E G VL G + L I ++ L G S+ +++ N I +P Sbjct: 124 KARPKEDGGVLISGRLTLIIGDREIQLEPGDSFQFR-ETDYAWRNDGKEPAVAIWIVSPP 182 Query: 184 TF 185 + Sbjct: 183 IY 184 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 3/173 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 RL +R+Q+G + AE +GLT S +S +E+ P+I+ KL K + + + FSE Sbjct: 43 RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102 Query: 71 EKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + E V MGS + + + G + L + +H+G Sbjct: 103 -RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFREHEG 161 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 EE+ V +G + + + L G S N IPH + ++ + Sbjct: 162 EEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVVS 214 >UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA Length = 180 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 6/171 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +R+Q+GL+ + A+ +GLT S +S IE+ + +P+I+ K+ + + + FS+ Sbjct: 5 LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG---TTTGERIKHQG 128 + D L G Q ++ + +T++ G + G +H G Sbjct: 65 AHETITADRAHDRL---GPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTG 121 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +E V G + L Q L G S + + H ++ Sbjct: 122 QEFVFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172 >UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34 Tax=Burkholderia RepID=Q39C45_BURS3 Length = 286 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + G+R+ +R++ + A + L+ +S +E+ ++S+L + K Sbjct: 26 MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + LS +P + + +L + ++ A+ + + Sbjct: 86 VPLSALIDQPRQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMME--GYR 143 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H G+E VL G I T+ +DY L G S + H +N G +I+ Sbjct: 144 SEWVAHGGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203 Query: 181 TPTTF 185 T F Sbjct: 204 TLPLF 208 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 4/187 (2%) Query: 1 MSDEGL---APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 +SD L + + + R ++G + A +G++ + IEQ + +P++ T+ K+ Sbjct: 12 VSDLDLLTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGD 71 Query: 58 VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 G+S++ + P V Q + G +L+ L M PG Sbjct: 72 ALGISITTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPG 131 Query: 118 TTTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 ++ G E+ V+ GE+ LT++G ++ + AG S + PH++ N A + Sbjct: 132 ESSPSDPHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEM 191 Query: 177 ISAHTPT 183 + A + Sbjct: 192 VMAVSVP 198 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ +R+ +G + + A LSG++ S +S IE+ +P + ++ + +G++L + P Sbjct: 21 RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80 Query: 71 EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E P VI DD + ++ + + + + T + G + +G Sbjct: 81 EPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGKLESQPHFEG 140 Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E TV +G + LT + L G S +PH N G + Sbjct: 141 TREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFLV 192 >UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C444_9CLOT Length = 199 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 5/179 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 ++D L G + R+++G++ ++ +E +GL+ +S +E++ SP + +QK+ + +G Sbjct: 18 LNDIQL-IGYSIRSQRRKKGMTLQQLSEATGLSIGYLSNLERNANSPTLVNIQKICEAFG 76 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119 S FS E E +++ ++ + S+ +MKL + + I+ T +P G Sbjct: 77 TS---LFSLLEMNKEEDIIVRHNEREPIISEEHNMKLENIDFGLDDTSFIYMTIEPDGAG 133 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G +H+ E+GTV++G + L ++ Q + L G + I H + N + C Sbjct: 134 DGLWWEHEYHEVGTVIKGRLTLKLDNQVFELDEGDTILIKAHTRHCYYNKTQESCVSYW 192 >UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LQ1_BACLD Length = 183 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 67/177 (37%), Gaps = 6/177 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ + + +R+ + S + + ++G++ ++ IE+ SP I+TL K+ Sbjct: 1 MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +S + E+P V+ + + + G + + + + + + PG Sbjct: 61 VSFTSL---AERPAGEPTVVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGC 117 Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 H G EE V +G + +T L G + H++ N + Sbjct: 118 VHESEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTA 174 >UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2 Tax=Cronobacter RepID=C9Y503_CROTZ Length = 204 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 10/175 (5%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D + L +RQQ+ S +AA+ +G++ + + IE+++ SP ++TL K+ + + Sbjct: 30 DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 S F + P + Q + ++ + + M+ T PG + Sbjct: 90 FSVFITPPAPG---------ARTVFDAQQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDS 140 Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G E V+EGE+ L +G L G+ PH++ N + R Sbjct: 141 TPHENGVTEHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRF 195 >UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMT2_AGRRK Length = 200 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 5/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + GKR+ +R ++ + + SG++ SAIS IE +++SP + KL + G+ + Sbjct: 10 DEMDLGKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDI 69 Query: 64 SEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119 SE FS+P + P + + + ++ +++ + + + T + Sbjct: 70 SELFSDPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRD 129 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ I H GEEI VL G + L + L G ++ + H+ G + Sbjct: 130 FGKLIAHVGEEIVVVLSGRVELRTEFYEPLVLEEGDCAYFDSTMGHACLAAGDGDAELFW 189 Query: 179 AHT 181 + Sbjct: 190 VCS 192 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + + + R++QGLS A SG++ S IS IE+ + P+ L +L + G+ Sbjct: 16 TSPQIHIAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGV 75 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + S + + + + ++ ++ + G + + P R + + T PG +TG Sbjct: 76 TFSRLMAPATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTG 135 Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E H+ E VL G + I + + G S H+F+N C Sbjct: 136 EFTAHRRGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLV 195 Query: 180 HTP 182 P Sbjct: 196 IDP 198 >UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM0_DESHD Length = 181 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+ + IR+++ L+ + A+ L++ IS IE++ VSP+++TL+++ + + L Sbjct: 2 IEVGEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLES 61 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF +P+ + + +D+ + ++G + +L+ + + + Sbjct: 62 FFLDPDT-EIIYSYLKKDEQQYIPAEGRNWRLLIDHSKTNLMGAF--VVDSTAVDKNVYS 118 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 HQG E+ VLEGE L I+ +DY L AG S + I H + ++I TP Sbjct: 119 HQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIVIATPP 176 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + +RL ++R+ +G S AE +G++ + + IE+ + SP ++TL KL + Sbjct: 1 MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +SLS ++ ++P + + + ++ + +P + G + Sbjct: 61 VSLSWLLNDEQQPMT----------FDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQS 110 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +G E+ V G + + + + AG++Y + PHS+ N +G ++ Sbjct: 111 HSDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAV 170 Query: 180 H 180 Sbjct: 171 I 171 >UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAA2_9FIRM Length = 212 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 12/191 (6%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D+ GK + R Q LS ++ AE ++ S +S IE K +P+++TL+ + + + Sbjct: 26 DQMDKLGKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVP 85 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQG------VSMKLVHNGNPN--RTLAMIFETY 114 + F E + + +++ +++ I + ++G +S L+ + M Y Sbjct: 86 MFTLFIEEDI--DRPILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAY 143 Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 Q + H GEE+ G+I L + + L G S I H + N S C Sbjct: 144 QYNSDNFNF--HNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATC 201 Query: 175 RIISAHTPTTF 185 II + +P F Sbjct: 202 AIIFSISPPIF 212 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D G+R+ +R+++GL+ A SG++ + IS +E+ + P + +L + G+ Sbjct: 11 EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 SLSE E E+ V + + G +L+ G R + I G+T+G Sbjct: 71 SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130 Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E H+ EE V G ++ + G ++ L G + +PH F N G C Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190 Query: 180 H 180 Sbjct: 191 I 191 >UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I178_CLOBH Length = 177 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 3/174 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ R+++GL+ + +EL+ L+ IS +E+D SP++S LQ++ +V G++L E Sbjct: 1 MQLGEKIKYYRKKKGLTIKELSELTNLSIGFISNLERDLNSPSVSNLQQICEVLGINLME 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124 E + ++ ++ + + +++ NG N+ L I T + T + Sbjct: 61 ILKSTEDKEYIVCKDSRSEIFSTDDKKIKFEMLTNG--NKNLNAIAITIEGNTDYNDTSW 118 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H +E+G V++G + + +N Q Y L G S +N PH + N I Sbjct: 119 GHSYDELGIVVKGTLEIQMNSQTYTLHEGDSIYLNKFTPHRYKNPYEEINVTYW 172 >UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM1_DESHD Length = 179 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 7/183 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D G + +R+ Q LS + AE + LT S +S IE++ SP++ TL+K+ G Sbjct: 1 MAD----LGSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALG 56 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S FF P+ + I++ L++N L + Sbjct: 57 YPISSFFVNPQFTST-HIPAEAQRTIQINPGMTLRFLINNVGQRNQLGAYIAEVA--DLS 113 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E I H G ++ VLEGE+ + ++++L G S N +PH S S ++ A Sbjct: 114 EEIIIHHGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVAT 173 Query: 181 TPT 183 TP Sbjct: 174 TPP 176 >UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUX9_DESOH Length = 433 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 8/189 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M L G R+ E+R ++G+SQ A G+T S IS +E +++ P++ L K+ ++ Sbjct: 246 MRSGSLDLGLRIKELRTKKGMSQVALARGIGVTPSTISQVENNQIFPSVPALIKMSEILS 305 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-----NGNPNRTLAMIFETYQ 115 + + FF P+VV ++ + + G++ +L+ + Q Sbjct: 306 VDVGYFFQTG-AGSAPRVVFSEFEAMPSPVPGMARRLISCRRLMPEDMEAQCVPYIIEIQ 364 Query: 116 PGTT-TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 PG G +GEE G ++EGE+ +T+ L G + +P + N Sbjct: 365 PGAVLDGHFFSLKGEETGFLMEGELHMTLGHGAQPLQTGDLVYLAAEVPSQWENRGKLPA 424 Query: 175 RIISAH-TP 182 R++ TP Sbjct: 425 RLLWITATP 433 >UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IAI3_9BACI Length = 188 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 4/179 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GK+++ IR+++G+S + + LS ++ S +S IE+ +P I+ ++ + +LS Sbjct: 1 MEFGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSA 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 E + + + + S G L+ P+R + + P + +G Sbjct: 61 LLDSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPA 120 Query: 126 HQG--EEIGTVLEGEIVLTINGQDY--HLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+ +E V +G + + ++ Y L G S+ H F N + C Sbjct: 121 HKSGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179 >UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RGE3_PHEZH Length = 206 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 5/187 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + G + R++ GL+ + AE SGL+ + IS IE+ K +P+I +L ++ G+ Sbjct: 18 RKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGV 77 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++ F +E + +D + + N P + L + QPG + Sbjct: 78 GVNHFV--EATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISE 135 Query: 122 ERIK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H GE VLEG + G + L G S + SN +++ Sbjct: 136 AANIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLW 195 Query: 179 AHTPTTF 185 + F Sbjct: 196 VGSVVLF 202 >UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=B3QIN2_RHOPT Length = 207 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 4/182 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D G L +R +QG S R A+ SG++ + + IE K P I TL K+ G+ Sbjct: 21 DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + + E P PQV+ D + +QG + + + + R + P Sbjct: 81 FARLIAT-ETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHRED 139 Query: 122 ERIKHQG-EEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G E V +G + +T + L AG + + +PHS+ N A + Sbjct: 140 ADPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLV 199 Query: 180 HT 181 T Sbjct: 200 MT 201 >UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJV6_DESAH Length = 190 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 8/176 (4%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE- 69 + R + L+ + A+ +GLT +S +E+ + +P STL K+ + ++ S+ Sbjct: 9 NIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALEVEITTLLSQG 68 Query: 70 -PEKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + P + + + G +L+ P + + Sbjct: 69 IDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIHAPFEAQR--TY 126 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+GEE V++G++ YHL G + ++ IPH + +++ Sbjct: 127 SHEGEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEKSKLLVVI 182 >UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYS8_RHOSR Length = 254 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 13/184 (7%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G L R + LS R+ A+ G++ S +S +E K P++ TL L V +SL + Sbjct: 36 EIGVALKRARLDKKLSLRQVADQLGISTSLLSQVENGKTQPSVKTLFGLATVLEVSLDKI 95 Query: 67 FS---------EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 S ++ + D+ + GV+ + + G + ++ TY+ G Sbjct: 96 LSGRSGLDIELPADRDAAAGIQRAADNPVLEMENGVTWQRLATGGRTE-IEPLYVTYEVG 154 Query: 118 TTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 ++ G++++H G E +LEG + L ++ ++ L G S+ ++ PH F N Sbjct: 155 ASSSVDGKQMRHDGAEFAYILEGTLRLRLDFDEHDLGPGDSFCFDSSRPHLFYNPGTVPA 214 Query: 175 RIIS 178 R + Sbjct: 215 RGVW 218 >UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces RepID=D1XSL5_9ACTO Length = 206 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 3/180 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +DE RL ++R+ +GL+ AA + L+ + +S +E + P++ L L ++YG Sbjct: 12 ADEVPGVAPRLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGT 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++SE E P E ++ + G++ + G R + + GT + Sbjct: 72 TVSELLG--EMPPERDAIVRGGP-LGAGAEADGWRYRQAGGSGRAMQALRVHVPHGTESE 128 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE VLEG + + + + L AG S ++ PH + +++ HT Sbjct: 129 LVRVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188 >UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERF8_OCEIH Length = 189 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 4/175 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G ++ ++R + +Q++ A+ G++ S +S IE + + AI+TL K+ + L+ Sbjct: 8 SIGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDALKVPLAWL 67 Query: 67 FSEPEKPD-EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP---GTTTGE 122 + E+ D Q N+ + S G S +L+ N + + P + Sbjct: 68 LDDKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTPKHRNLRQDK 127 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H +E +LEGEI L NG+ L G S PH F + ++ Sbjct: 128 TYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLFLPVNDRGAMVL 182 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ G+ L +RQ+ G+S +A++++G++ + + IE+ + SP +STL K+ + Sbjct: 1 MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGT 118 ++ + +E E VI ++++ + Q +MKL ++ +P R + + Sbjct: 61 INFTTLLNENTNTYE---VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENC 117 Query: 119 TT-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 T H EE V+EG++ L ++G+ Y L +G S + + H + N + G Sbjct: 118 THVSSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKT 174 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 5/167 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + G + + R ++GL+ + + ++ S +S IE + SP++ T+ +L + G++ Sbjct: 23 NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLV-HNGNPNRTLAMIFETYQPG 117 LS FS + P + ++ +E+ +G + L+ +N P + T + Sbjct: 83 LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNK 142 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 + T +H G E +LEG++ Y L G + + IPH Sbjct: 143 SETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPH 189 >UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota RepID=Q468H3_METBF Length = 192 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 76/192 (39%), Gaps = 10/192 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS+E G ++ ++R+ + ++ AE S + I +E + P+++ L K+ + G Sbjct: 1 MSEEN-RVGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59 Query: 61 LSLSEFFSEPEKPDEPQVVIN-QDDLIEMGSQGVSMK-------LVHNGNPNRTLAMIFE 112 + L F + + V D+++ + + + + +R + Sbjct: 60 VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119 Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 P ++ H+GEE +L GEI + + L AG S ++ IPH Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179 Query: 172 GICRIISAHTPT 183 +I++ Sbjct: 180 EDAKILAVVYAP 191 >UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY73_9RHIZ Length = 154 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%) Query: 36 AISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ---- 91 +S IE KV P ++ L+KL ++++ FF KP++ + ++ +G+ Sbjct: 1 MLSKIETAKVRPTMTMLRKLADELHVNIAFFFETYSKPEDVVHRQGERPILNVGAASEEV 60 Query: 92 GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLV 151 + ++ + + L +PG +T H GEE+G VLEGE+ +T+ + Y L Sbjct: 61 AIRLERLPPMSRQSLLEANIHIVEPGGSTEGAFSHVGEEMGFVLEGELTITVADETYRLR 120 Query: 152 AGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G S+A ++ + HS+ N + RI+ +TP +F Sbjct: 121 TGDSFAFSSTLLHSYKNEGDRVARILWVNTPPSF 154 >UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAN3_NAKMY Length = 225 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 6/185 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++E G +L IR+ Q + AE SGLT +S IE+D S +++ L ++ G+ Sbjct: 12 NEETARIGAKLKAIRRAQRRTLEEVAEASGLTKGFLSKIERDLASASVAALLRICATLGI 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 LS F + V Q I+ G Q + + R + ++ +PG +G Sbjct: 72 PLSSLFESDSTGE--VVRAGQYPRIDFGGQDLEEYQLTP-FAERRVQVLRSDIRPGGGSG 128 Query: 122 -ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIIS 178 E E E V+ G + + + L G ++ + + H+F + + ++ Sbjct: 129 PEAYSLPAEVEFAYVVTGRLAIGFADRTVELGPGDAFTFDATVNHTFRAEAVDELTTVLW 188 Query: 179 AHTPT 183 P Sbjct: 189 VLCPA 193 >UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales RepID=Q21W54_RHOFD Length = 273 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R RQ+Q LS +A++LSGL S IST E+ +++LQ+L Y S+++ Sbjct: 94 LGVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNTSVTKLT 153 Query: 68 SEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + EK V N+ + + G+++ + + L T QPG + Sbjct: 154 APEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAENLES--LDCQKWTLQPGAGSDGAY 211 Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H+GEE +L+G + +TI+ G+ L G S + ++ H++ ++ +TP Sbjct: 212 SHEGEEFIHILQGVLTITIDGGEQISLGEGDSISFSSQSAHAWRAVGDIPTMLLWINTPK 271 Query: 184 TF 185 +F Sbjct: 272 SF 273 >UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMW2_9PROT Length = 218 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 4/175 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + + R + ++ A GL+ S +S +E+ ++ L ++ G ++ + Sbjct: 10 RIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALGGTIHDL 69 Query: 67 FSEPE--KPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 P+ D V + + + + G V G R + + Sbjct: 70 IGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSAAGSADT 129 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 R H GEEI VLEG + + + L G + + + IPH+ R++ Sbjct: 130 RFAHPGEEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPARVL 184 >UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58B91 Length = 197 Score = 145 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 70/182 (38%), Gaps = 3/182 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 SD + G + +R G++ R AE GL+ +S E+ S ++++L + + Sbjct: 4 SDPAVRVGAEIKRVRSSLGMTLRELAERCGLSPGFLSLAERGVNSISLTSLFAIAGALEV 63 Query: 62 SLSEFFSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 E K + +++ D + +++ P++ + ++ P Sbjct: 64 DAVELLGSAGKRSRAEYAVSRRDDPRAARVVMGEREHRVLTAELPDQHIEVLATRVNPTN 123 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +H GEE V+ GE+ + + L AG + + PH+ N + ++ Sbjct: 124 APSPVTRHDGEEFCYVVSGELTFLMPDESVVLAAGDAIHFKSSTPHAVHNQGDVVAEVLW 183 Query: 179 AH 180 Sbjct: 184 TV 185 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 145 bits (366), Expect = 8e-34, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 R E+R+ + S R AA+ +G++ S +S IE+ SP + L KL + +G+S+S+ Sbjct: 5 LATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLV 64 Query: 68 SEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125 E + V+ + + + + G + + + N + + P ++G Sbjct: 65 GGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPP 124 Query: 126 HQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180 H+ EE TV G + L + + Y L AG + + H F N S Sbjct: 125 HRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFIVI 182 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 145 bits (366), Expect = 8e-34, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A +++ ++R +G S A SG++ + IE + +P+I TL ++ +G+S++ Sbjct: 14 AVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSIARL 73 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-TGERIK 125 E+ ++ ++ G G +L+ + + +PG Sbjct: 74 LEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWRMEPGEALRSPDHA 133 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H EI VL+G +T++G D+ + AG++ + H + G R++ + Sbjct: 134 HGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLMMVVVTPS 192 >UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B0MBC4_9FIRM Length = 180 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 2/173 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L K + +R++Q LS ++LSG++ S ++ IE+ +P ISTL K+ + Sbjct: 2 NLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPFD 61 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 P+ P E + + L+E S V + + +R A+ + +P + Sbjct: 62 ALTVRPKTPYEIIKTADIEPLLE-DSGRVKNYPLFPDDADRKFAVYYLKLEPYSRWESEA 120 Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 +G E TV G++ + + + L +S HS+ NT + Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVL 173 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + K L +IR + GLS ++L+G++ + IE+++V+P IST+ K+ Sbjct: 26 MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT- 119 +S + SE E D V +N I S+ V N +R + + PG Sbjct: 86 ISFTSLLSEKEA-DVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVM 144 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + + EE TV EGE+ L+I + Y + G S +PH + N S+ + I Sbjct: 145 SSDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVI 201 >UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLI4_HAHCH Length = 192 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 6/186 (3%) Query: 1 MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M D L GKR+ ++R+ + L+ + A+ S ++ S +S IE+ + +P +TL L + Sbjct: 1 MKDTDLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRA 60 Query: 59 YGLSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 G+ SE E E ++ Q I+ G + ++ + ++ + Sbjct: 61 MGIEWSELVDESEGVSHSPIEHIIAAQTPKIDNPQGGYHLSILSPPHLVGSIEWYELRMR 120 Query: 116 PGTTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 P + QG E TVL G++ + Q L G + + + H+ N Sbjct: 121 PQGKLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDT 180 Query: 175 RIISAH 180 + Sbjct: 181 IALLVV 186 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 2/175 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + L +R+++ LS A+LSG++ S + IE+ +V+P +ST+ K+ Sbjct: 1 MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S+ + E E + N L+E V + + + R + +Q Sbjct: 61 VSFSQLVNHTETNVEIVDIKNLKPLLE-DEGRVRIYPTFSFDSTRRFEIYSLEFQTNGYL 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 QG +E TV GE+ +T+ + + + G++ PHS+ NT C Sbjct: 120 STEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANC 174 >UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia RepID=B9R695_9RHOB Length = 183 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 5/185 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D+ LA +RL +R+ +GLS AE SG++ + +S IE+ SP + L +L +G Sbjct: 1 MNDQDLA--QRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118 +S+++ F + ++ N+ + G + V ++I T G Sbjct: 59 VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-II 177 + E +L G + + + + L G P+++ T + R ++ Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178 Query: 178 SAHTP 182 + TP Sbjct: 179 TVITP 183 >UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X7_HALOH Length = 182 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M++ GK+L ++R +G S E++G++ S + IE+ K +P + TL K+ + Sbjct: 1 MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S FF E E +++ L+ + + N + + +PG + Sbjct: 61 VPFS-FFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSY 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 QG EE V EG + LT+N ++Y + H + N S + Sbjct: 120 KSEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKA 176 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 5/178 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G + ++R+ ++ A+ +G T I+++E D++SP++S L +L + G+ F Sbjct: 353 SFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPGTF 412 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125 + EK + + +Q S +++ N L T + K Sbjct: 413 LRDEEK---SAIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVEYK 469 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-HTP 182 H+GEE VL+G++ LT++ + + L G+S N+ IPH + S R + +TP Sbjct: 470 HEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO Length = 204 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 4/180 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + L E+R++ GL+ AA+ + L+ + +S +E + P++ L L + YG Sbjct: 10 EELAVTVAPHLRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGT 69 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++SE E P P V+ + + G + +G R + + G+ Sbjct: 70 TVSELLG--ETPAGPGAVVRAGTMEPTEAGGWTYW--QSGGSGRAMQALRVRVPYGSQGD 125 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE VL G + L + + L G S ++ PH + ++ HT Sbjct: 126 IVRVHPGEEWLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%) Query: 1 MSDE---GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M+D+ G A + + +R G S + A +G++ + +EQ + +P + TL ++ + Sbjct: 1 MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60 Query: 58 VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 G+ L+ E+P + ++ G G S L+ ++ + +PG Sbjct: 61 ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G EI V EG + +T++GQ + + AG + PHS+SN +CR Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 Query: 177 I 177 + Sbjct: 181 V 181 >UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium sp. Marseille RepID=A6T0N3_JANMA Length = 221 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 9/192 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +SD L G+R+SE+R +G +Q R A +G T +S IE K+ P I TL K+ + Sbjct: 13 LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72 Query: 61 LSLSEFF-SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQ 115 L+E +E + + ++ + + + G + N ++ + + Sbjct: 73 TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVFP 132 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTI----NGQDYHLVAGQSYAINTGIPHSFSNTSA 171 R H+GEE V +G++ + Q + L AG S ++ IPH + Sbjct: 133 NEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPHRGRSIKG 192 Query: 172 GICRIISAHTPT 183 ++ P Sbjct: 193 ESKALVVIFRPP 204 >UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30FD5 Length = 205 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Query: 25 RAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD 84 A +G++ S +S +E + I L +L+ YG+S++E P D V ++ Sbjct: 44 DVARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETR 103 Query: 85 LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTIN 144 + +G ++ L+ +G +RT+ + PG + E H GEE VL G + L ++ Sbjct: 104 QLHSPEEGTTIYLLASGT-DRTMLPMLLELAPGASLAESGHHAGEEFVHVLAGRLRLEVD 162 Query: 145 G-QDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAHTPT 183 G + + L AG S + PH F N S R+I +P Sbjct: 163 GAEPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSPP 203 >UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2H2_ACIC5 Length = 260 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 9/181 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+R+ +R ++ + +GL+ S +S +E +V P + L ++ V+ LS F Sbjct: 27 RIGERIKRLRLKKSMGLVELGRHTGLSASFLSQLETGRVVPTLRNLARIAMVFSKDLSYF 86 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVS-----MKLVHNGNPNRTLAMIFETYQP--GTT 119 F +P V + + + + GV + + P+R L + + P T Sbjct: 87 FET--EPHTLFRVHKKKERVRLPQTGVDDPTYFFESLGYMVPDRMLDPYYAEFVPLKKGT 144 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H G E V+ GE+ + + + L G + PH++ ++ Sbjct: 145 EVRAHVHPGFEFLYVISGELEIKHGEKLHVLEGGDGVYFDASTPHAYQCAGKTPAAVVIV 204 Query: 180 H 180 Sbjct: 205 T 205 >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 9/177 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L ++RQQ+G S R AE +G++ + + IE+++ SP ++TL K+ Sbjct: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S F S P+ + + Q + + + +P G + Sbjct: 61 VPFSTFISPPQSATPS--------VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 +G E V++G++ L ++G+ L G+ + H + N Sbjct: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 >UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium RepID=B5ZXQ7_RHILW Length = 189 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 3/176 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ ++R +GL+ A SG++ + IS IE+ + SP S L ++ GLSLS F Sbjct: 8 AIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAALGLSLSAF 67 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125 F+E + P + + G + V + ++ + G Sbjct: 68 FAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGARVSFPPHA 127 Query: 126 --HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H + + +GE+ +T Y L G + G H F N R Sbjct: 128 ASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARYCVV 183 >UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria RepID=Q4ZU57_PSEU2 Length = 201 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G ++ RQ Q L A ++G++ +S IE +VS ++ L +L V G+ +S+ F Sbjct: 17 LGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLF 76 Query: 68 SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLV-HNGNPNRTLAMIFETYQPGTTTGE 122 S+ ++ +++ D+ +E+ +G + L+ H P ++ T + Sbjct: 77 SQYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFP 136 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 H G E +LEGE++ Q Y + AG S + IPH Sbjct: 137 TFSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPH 178 >UniRef50_C9XPQ5 Putative transcriptional regulator (Putative uncharacterized protein) n=3 Tax=Clostridium difficile RepID=C9XPQ5_CLODC Length = 188 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+++ IR+ + + ++L+ L+ S IS IE+D + P++S+L+K+ +V L F Sbjct: 2 LGEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMFM 61 Query: 68 SEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHN----GNPNRTLAMIFETYQPGTTTG 121 + D +VI ++D + + + ++V L + FE Sbjct: 62 DDNNTDD---LVIRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPSILFVEFELKPESEDAK 118 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAH 180 + I H EEI V G + + + + L G S I +PH N S I R Sbjct: 119 DYIYHASEEIMVVTSGVVDICMGEKVVRLNPGDSTFIKANVPHKIINPSKDTIARGYGVI 178 Query: 181 TPTTF 185 +P + Sbjct: 179 SPPIW 183 >UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales RepID=Q1LDV8_RALME Length = 203 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 5/182 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G L +RQ Q LS + +G++ S +S IE++ +P ++ L +L G+SL++F Sbjct: 20 AVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGVSLTDF 79 Query: 67 FSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 ++ P+ P V + ++ ++++ + + QPG Sbjct: 80 LAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPGGVLAS 139 Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 G +E +VL G + + G + L G + + H+ N + + Sbjct: 140 EPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATALLVVV 199 Query: 182 PT 183 Sbjct: 200 HP 201 >UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B5S6_9FIRM Length = 194 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 4/174 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+R+ E R+++ ++ R E +GL+ +S +EQ+K SP + +L ++ + + + Sbjct: 7 IGERIRECRKKKMMTIRVLGEYTGLSAGYLSMLEQNKTSPNVDSLARICEALDIDIQYAL 66 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126 E E P + + + + +++++ G I T +PG + E +H Sbjct: 67 -EGEMPGKTVIHREEMSKHLYPEENMTVEVADFGQGESIFEYI--TIEPGESAKKEEYRH 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E+ V++G + + + G+ L G S I + HS SN C I + Sbjct: 124 VFSEMCMVIKGTLNVEVEGKICSLHPGDSVYIKSRERHSISNPGKEPCVSIWVY 177 >UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5R2_PAESJ Length = 187 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 4/179 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKR+ IR++Q +Q + G T S +S IE PA++TL K+ G+ +S+ Sbjct: 1 MELGKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSD 60 Query: 66 FFSEPEKPDEPQVVIN---QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 K + + + + +G S +G ++ + + G Sbjct: 61 LLEPSPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSH 120 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+G+E VL G++ + +Y + AG N+ H S + ++ T Sbjct: 121 VFSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNSLEEHLVIPVSEQ-VKYLAIFT 178 >UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWR1_9RHOB Length = 331 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 2/159 (1%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 ++ + + +SG++ +S +E+ +P + TL ++ + + F P D Sbjct: 145 MTLQDVSNVSGVSVGYLSQVERGNATPTLGTLTQIAQALEVDTDYFVRTPHTVD-SLTRG 203 Query: 81 NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIV 140 + + + + + L PG + E + H GEEI +LEG I Sbjct: 204 DSRPKFAVAGSSIEYEQIGVERAGHELTSYVMNVPPGYES-EVVTHVGEEIIYILEGTIS 262 Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + ++Y + G S PH ++N + RI+ Sbjct: 263 QIVGEREYIMGPGDSLHYLGTTPHCWANKTDRPARILWV 301 >UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=Deltaproteobacteria RepID=B8F9X8_DESAA Length = 433 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 5/177 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ ++R ++GLSQ + A++ G+T S IS +E + + P+I L K+ ++ +S Sbjct: 253 DLGTRIKQLRVKKGLSQVQMAKMVGVTASTISQVENNSIYPSIPGLLKMAEILNVSPGYL 312 Query: 67 FSEP-EKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 FS EK + Q + + + +G L + E T +G Sbjct: 313 FSSDFEKRSQIVFPSGQASAVTLANLSEYEGSVKMLTPLDFEGNAEPFMIEIEPEQTVSG 372 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H+G+E+G V G + ++ + + +G + P + N G R+ Sbjct: 373 HFFAHRGQEMGYVARGALEISFGDEIHKAKSGDLVYLQDQTPTRWYNPGPGAARLFW 429 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 2/178 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ + R + + + A +G++ + +EQ V+P + TL +L G+ L Sbjct: 75 AIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGVGLPAL 134 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 P Q + G G LV P + + T P Sbjct: 135 VEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHDSEAHS 194 Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHTP 182 G E+ V EG + + ++G Y L G + + H++ N++ R ++ P Sbjct: 195 DGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTVFEP 252 >UniRef50_C5ENH1 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENH1_9FIRM Length = 190 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 4/182 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G + E R+ + L+ + +E +GL+ IS +E+++ P++S+L+K+ + + + + Sbjct: 2 LGTNIREYRKNKKLTIKELSERTGLSIGYISQVEREEAEPSLSSLRKIAREFDVPVYVLM 61 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN---GNPNRTLAMIFETYQPGTTTGE-R 123 + + + + V + + N + MI +P + E Sbjct: 62 DDHRNTHNLTIRREERLSARIKKSSVEYEFLTPLPSPNFSPKTLMIRAILEPCSRDTEIP 121 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 I H EE VL+G + + L G + I +PH+ N +A ++S TP Sbjct: 122 IVHHSEETLLVLKGTLTVVAGDVTIVLNEGDTTIIEEDLPHTCINDTADYVEVLSTITPP 181 Query: 184 TF 185 + Sbjct: 182 VW 183 >UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UEQ1_SINMW Length = 209 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + + L ++RQ+ GL+ A L S +S IE ++SP T+ L + G ++E Sbjct: 19 SIAETLRQLRQENGLTLNELARRCALAPSTLSKIENGQMSPTYDTILSLAEGLGADVAEL 78 Query: 67 FSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GE 122 F+ + + + D + + +++ ++ + + + + G Sbjct: 79 FARRQTTTVSGRRTINRAGDGVAHNTDQYDYQMLCTELAHKQFVPLKAIIKANSISRFGG 138 Query: 123 RIKHQGEEIGTVLEGEIVL-TINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H GEE VL GEI L T L G S ++ + H+ S ++ + Sbjct: 139 MLSHSGEEFVYVLSGEIELHTQFYAPTRLHTGDSCYFDSTMGHALLKASEEDAEVLWVCS 198 >UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=Rhodobacterales RepID=Q1GGY8_SILST Length = 209 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 5/185 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + E L G R+ E+R+Q+ + AA +GL S +S IE ++SP L+KL + Sbjct: 21 APEALDLGARVRELRKQRDWTLEHAASQAGLARSTLSKIENGQMSPTYDALKKLAVGLQI 80 Query: 62 SLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT- 118 S+ + F+ P++ + +V + + +L+ +G + + + + Sbjct: 81 SVPQLFTPPQRDQVNGRMIVTKFGEGSAHATATYEHELLADGLTRKNMLPYRARVRARSM 140 Query: 119 -TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 ++H GEE VL G + L + + G S + + H+ + S+ I Sbjct: 141 DEFDGWVRHDGEEFMYVLTGVVKLYTEFYEPVEMRRGDSAYYDGAMGHNVISVSSEDATI 200 Query: 177 ISAHT 181 + + Sbjct: 201 LWVTS 205 >UniRef50_C3JHD6 Transcriptional regulator, XRE family n=2 Tax=Rhodococcus erythropolis RepID=C3JHD6_RHOER Length = 211 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 17/191 (8%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL RQ + L+ AE G+T +S +E+D V+ +++TL K+ V + + Sbjct: 14 RIGARLKAARQSKRLTLDDLAEACGVTKGYLSKLERDHVNASVATLIKVCAVLEIPVGSL 73 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F + V + I G + ++ L+ N R + ++ +PG +G Sbjct: 74 FENASAGE--VVRADAMPQISFGGEKMTEYLLTPTN-ERRIQVLLGELEPGGGSGREFYS 130 Query: 127 QGEE--IGTVLEGEIVLT------------INGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 + VLEG + ++ ++ +D L AG S+ HSF + Sbjct: 131 LPIDVNFVHVLEGGLRVSFEGGRTDPNGEAVDAEDVVLAAGDSFTFTPTHNHSFQAEGSV 190 Query: 173 ICRIISAHTPT 183 +++ P Sbjct: 191 PAKVLWVLNPA 201 >UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LD32_RALME Length = 251 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 6/181 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 GKRL R+ G + AELSG++ + IS E+ +++ + K + + E Sbjct: 20 TFGKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEM 79 Query: 67 FS---EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 F+ E P + +V + + Q ++ + + + ++ T TG Sbjct: 80 FAGAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPE 139 Query: 124 I--KHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + H GEE VL GE+ + NG+ L G S + + H++ + S + R I Sbjct: 140 VFASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVT 199 Query: 181 T 181 T Sbjct: 200 T 200 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 2/179 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M RL ++R +G S ++ A++SG++ SA+S IE +VSP TL + + Sbjct: 1 MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118 +++S+ + E P +P V + G S ++V + +I T +P Sbjct: 61 MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + K E +LEG + +T+ + + L AG P F C +I Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLI 179 >UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria RepID=A0LGL4_SYNFM Length = 209 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 7/179 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ + R+Q+ L+ A +GL + + +E+ V P++ L K+ + GL L F Sbjct: 26 IGTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLGTFL 85 Query: 68 SEPEKPDEPQVVINQD----DLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121 + E D V + + +++ + V+++ + G +R + + P + Sbjct: 86 DDQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPESARD 145 Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +++ H+GEE VL GE+ + + + L AG S N+ +PH S+ + I + Sbjct: 146 KKLSAHEGEEFIVVLSGEVEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIYAV 204 >UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin sensor domain n=3 Tax=Bacteria RepID=Q1IM53_ACIBL Length = 201 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 8/183 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G++L +R ++ L + +GL+ + +S +E+ K+ P + TL ++ V+ + L Sbjct: 18 PYRIGEKLRALRLKKKLGLVELGKHTGLSPALLSKLERGKLFPTLPTLLRIALVFSVGLD 77 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQG------VSMKLVHNGNPNRTLAMIFETYQP-G 117 FF++ E V+ +D+ + + + + L ++ Sbjct: 78 YFFAD-ESRRHVVSVVRKDERLRFPERPNTRDVAYYFESLDFAALEPKLNAFLADFEHVP 136 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 T +HQG E L G++ L I G Y L G S ++ +PH++ N C + Sbjct: 137 AETLRLHQHQGFEFLHTLAGKLELVIGGIPYELSQGDSIYFDSSVPHTYRNAQKKPCSAL 196 Query: 178 SAH 180 Sbjct: 197 VVT 199 >UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH Length = 230 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 4/177 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + +RL +R + G S AA +G++ + + IE+ + SP ++TL K+ + Sbjct: 42 MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 +S S F EP ++ +V+ D I +G+ + + + T PG Sbjct: 102 VSFSSFI-EPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGY 160 Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 G E V+ G + + + G+ L G++ PH + N Sbjct: 161 QRESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPA 217 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 9/177 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L +R Q+G S R AE+SG++ + + IE+++ SP ++TL K+ Sbjct: 8 MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S F S P+ P + Q + + + +P PGT + Sbjct: 68 VPFSMFISPPQAEFPPT--------FDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVS 119 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G E V++G + + G + AG+ H++ N+S Sbjct: 120 ESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHF 176 >UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chloroflexus RepID=A9WJF8_CHLAA Length = 181 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 2/176 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G+++ +RQ++GL+ + +E SGLT S +S +E+DKV+ +++ L+KL + + + ++ Sbjct: 1 MSLGQKIGRLRQERGLTLQEVSEGSGLTPSFLSRLERDKVNISVANLRKLAQFFSVQMTH 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF E E + V+ D + + +++ PN L PG++ Sbjct: 61 FF-EGEDDQQLGQVVRVADRVRLSLDDAPVQVFSLLPPNSDLDARLIEAYPGSSQQG-FS 118 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 +G ++ VL G + T+ + Y L G + +S++NT I +++ T Sbjct: 119 SRGSQMVHVLAGHVRYTLGEEQYDLAPGDTLFFRDDTAYSWTNTGHSIATMLTVST 174 >UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Burkholderia RepID=Q13RR3_BURXL Length = 276 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 12/189 (6%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+R+ RQ Q L+ A+ L G++ S +S +E +SP LQK++ + + E Sbjct: 79 DLGRRVRAARQAQDLTLETASRLCGVSRSTLSKVENGLMSPTFDVLQKIVLGLKIEIGEL 138 Query: 67 FSEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--TTGE 122 F K + + +++ +G M+L+ ++ + T + Sbjct: 139 FGSTPKVSASGRRALTRKNEGQRHAYRGYQMELLATDLAHKAMLPFRIRISAHTLDAFDD 198 Query: 123 RIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-- 179 +H+GEE V+ G + L HL AG S ++ H+ +TS ++ Sbjct: 199 WGRHEGEEFLYVISGSVCLYSELYAPTHLNAGDSLYFDSRTGHAAVSTSEEDAEVLWMAT 258 Query: 180 -----HTPT 183 HTP Sbjct: 259 SADIPHTPP 267 >UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=Q3SUW3_NITWN Length = 259 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 2/181 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + + GK L IR +QGLS R A+ SG++ + + IE K +P I L K+ + Sbjct: 73 ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTG 121 + + + + + L+ + + + + R P Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192 Query: 122 ERIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E E V +G + + + + L G + +PH++ N + Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252 Query: 181 T 181 T Sbjct: 253 T 253 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 6/168 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +RQ++G++ A +GLT S +S +E+ + P+I+ K+ + + +++ FS+ Sbjct: 5 LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131 + V + V+ +++ + ++ TT H G+E Sbjct: 65 EVSTISV-DRAAERGADRHHAVAARML-----GKEMSPFVVRPGRTFTTHPHPTHLGQEF 118 Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 V G + L+ +G+ L AG + PH ++ Sbjct: 119 IFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166 >UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4U4_9BACT Length = 193 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 6/182 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ +A G R+ R+++ ++ + A+ +GLT +S IE + P++ L + Sbjct: 1 MREQLIALGTRIKMARKERKMTLQTLADRTGLTAGLLSKIENFRTIPSLPVLVDIAAALE 60 Query: 61 LSLSEFFSEPEKPDEPQ-VVINQDDL----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 L+EFF + + + +++ ++ E G + + M++ T Sbjct: 61 TDLAEFFRDMTLGSKARWLLVRPEEQKTVEREEGRHLHYRMIFETSLSAVNMQMMYVTIP 120 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G+ GE + +G+E+ +L+G + + L G + + +PH N S Sbjct: 121 CGSG-GEPVSTEGDELLYILDGRFRYRLGDEVVELTPGDALYFDGTLPHVPENDSGAPGT 179 Query: 176 II 177 +I Sbjct: 180 LI 181 >UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=Desulfovibrionales RepID=B8J4U1_DESDA Length = 189 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 7/180 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ R+++ + A+ +GL + +E D + P+I LQK+ + G+ L F Sbjct: 6 TIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTF 65 Query: 67 FSEPEKPDEPQVVIN----QDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + D I+ ++ + + + + + G +R + P + Sbjct: 66 LDDQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSG 125 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + HQGEE VL+GE+++ +++ L G++ N+ +PH I++ Sbjct: 126 ERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPHYVGAAGDEPVEILAV 185 >UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Flavobacteriaceae RepID=C0YU86_9FLAO Length = 189 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 7/184 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D + GKRL +IR++ L+ A + +++ +S IE + P++ L L++ Sbjct: 1 MNDFLIGIGKRLKDIRKKNNLTINELAFKANVSNGLVSRIENGRTIPSLPVLLDLIQSLE 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDL-----IEMGSQGVSMKLVHNGNPNRT-LAMIFETY 114 + S FF EK + + + E+ ++G + + + + + T Sbjct: 61 IDASYFFEGVEKKSNAKFIYVPKESQQVIEKEVEAEGFRYMHIFSKSLHSLGFEAVLLTL 120 Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 +P + + I E +L+GE+ I+ ++ L G S N PH + S C Sbjct: 121 EPNSKREKVIT-DAWEFKYILKGEVKYVIDNEEVSLKEGDSLYFNGKFPHVPVSISNESC 179 Query: 175 RIIS 178 ++ Sbjct: 180 VMLV 183 >UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria RepID=Q7MEH5_VIBVY Length = 232 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 5/182 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E L G+R+ E+R + G++ A++ +GL S +S IE +++SP +QKL + + Sbjct: 49 EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108 Query: 64 SEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119 + F P K + + +Q +L+ N+ + T Sbjct: 109 PQLFEPPRKKVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHARTFEE 168 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ ++H GEE +L G + + L G S + + H + S I+ Sbjct: 169 YGDWVRHDGEEFLLILSGAVQFYSEFYEPVVLSEGDSVYYDANMGHMLVSVSEEDAHILW 228 Query: 179 AH 180 Sbjct: 229 VT 230 >UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGL3_SANKS Length = 204 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 6/186 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D G + R+Q LS + A+ +G++ +S +E+ +P++ ++Q+L G+ Sbjct: 17 ADTVAMLGATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGV 76 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 S++ EP + V + ++ + G +++ + + + +I T P Sbjct: 77 SVTRLL-EPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPA 135 Query: 118 TTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 T ER +H G E TVL G + +T ++ L AG + PH ++N G + Sbjct: 136 FTNVERPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVV 195 Query: 177 ISAHTP 182 + A P Sbjct: 196 LGAVAP 201 >UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA Length = 207 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 1/172 (0%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 + L IR +G S + A G++ + +S IEQ K P IS L K+ + SE E Sbjct: 29 ENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKE 88 Query: 70 PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG- 128 + + ++ S+ + + + NR +PG G Sbjct: 89 KNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGT 148 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E V+ G++ L + + L S + H +SN + + Sbjct: 149 TENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200 >UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N143_CLOK5 Length = 184 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D G L IR+++ L+ ++L+ ++ S + IE+ +P I+ L K+ Sbjct: 1 MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + ++ +E + P VV N D + G + + N +P + + + ++ + G++ Sbjct: 61 IPFTDLINEEKPP--ISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSY 118 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + G EE + G + L I ++Y L G S I H + N R Sbjct: 119 ESKGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRA 175 >UniRef50_A9DT77 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT77_9RHOB Length = 198 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 4/169 (2%) Query: 20 GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS-EPEKPDEPQV 78 +S + A + ++ IS +E+ P++ TL + + +S F +P + V Sbjct: 31 NMSLKDIAAKAQVSVGLISQVERGISMPSVKTLSAICNALEMPVSWLFDGGGRQPGQVVV 90 Query: 79 VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KHQGEEIGTVLE 136 +Q +++GS+G+ +L+ + + M+ +PG ++GE+ G + GTV+ Sbjct: 91 RRHQRRFLDLGSKGMIKELMTP-DSCSGIQMMRLVIRPGGSSGEKPYNHGSGAKCGTVVS 149 Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 G + L +NG + + AG S+A + F + P + Sbjct: 150 GLLALEVNGVVHKVEAGDSFAFDATEHIRFWALGDVEADLFWVVAPAVY 198 >UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3 Length = 220 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+RL +RQ + L+ A++L+G+ + S IE +K+SP L ++++ G + Sbjct: 31 IGQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDVL 90 Query: 68 SEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERI 124 + + V + +D++ + + L+H + + + + G Sbjct: 91 TNQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHRDSSAGMITLRMQVDARTVDEAGGLA 150 Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H+G+E VL GE+ L G+ L AG+S ++ PH++ S ++ TP Sbjct: 151 GHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLTPP 210 >UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=C4WPS4_9RHIZ Length = 211 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 13/194 (6%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D + G L +IR + + + ++GL S +S +E +++ L +L + G Sbjct: 1 MNDAKSSLGDILRDIRSRNHWTLAEVSAMTGLAVSTLSKVENNQMQLTYDRLIQLAQGIG 60 Query: 61 LSLSEFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114 + ++E F PDE + D + +Q + + + I Sbjct: 61 VDIAELFGAVATPDELSNVMGRRTFTKSGDGRSIITQNYDYLYICTEIYKKAMVPILAVA 120 Query: 115 QPGT--TTGERIKHQGEEIGTVLEGEIVLTINGQDY---HLVAGQSYAINTGIPHSFSNT 169 T G I+H+GEE VLEGE+ L + Y L G S + H + + Sbjct: 121 HARTLEEFGPLIRHKGEEFIYVLEGELELH--SEIYAPLRLKKGDSAYFDAMTGHGYLSV 178 Query: 170 SAGICRIISAHTPT 183 S +I+ + Sbjct: 179 SEEPAQILCVCSTP 192 >UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X8B7_ENTFA Length = 183 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 69/183 (37%), Gaps = 9/183 (4%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + G L +IRQ++ L+ A ++G++ +S IE+ +P I+T+ K+ + Sbjct: 2 EINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVP 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + + + P V + + ++ N R + +G+ Sbjct: 62 YTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFEL----DSGK 117 Query: 123 RIKHQGE-----EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + + G E V++G + L + Q Y L + + H++ N + + Sbjct: 118 KYQAVGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAV 177 Query: 178 SAH 180 + Sbjct: 178 VIN 180 >UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT Length = 248 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 1/175 (0%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+ L +R +GLS R A+LSG++ + + IE + +P I+ L K+ + + S F Sbjct: 68 VGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDVPFSAFV 127 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + P + ++ + S + + + R + + Sbjct: 128 AAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQSHPHPA 187 Query: 128 GE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 G E TV G + + + + L G + I H++ N T Sbjct: 188 GTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVMT 242 >UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus RepID=A0RIX6_BACAH Length = 237 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 5/173 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G + EIRQ++G++ + E +GL+ +S +E +K SP+ISTL+ + + L Sbjct: 57 MNIGSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLETISNFLNVPLPY 116 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124 E+ D +VV + + G + + + L + G Sbjct: 117 LLL--EQKDRLKVVKKVERKYSV--YGKDEQRIEHVAEQGGLRLNLVEIPAGFPKENTPN 172 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 H+GEE VL G++ + + G S++ N +PH N ++ Sbjct: 173 AHEGEECHLVLRGKLEVQHGEDVAIVEEGDSFSWNACVPHIVRNIGEETALLL 225 >UniRef50_A9DXP7 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DXP7_9RHOB Length = 196 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 2/168 (1%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 + + R + L+ ++ E SG++ +S +E+ +P++ TL ++ + + F P+ Sbjct: 1 MRKQRHRLSLTLQQLGEASGVSVGYLSQVERGLATPSLGTLSQIAVALQVEVGFFIHTPK 60 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131 D ++ + + + + P L+ PG + E + E + Sbjct: 61 TQD-SLTRADERQRFAVSGSSIEYEKLGADFPGHELSSYIMNVPPGYASEEVVHEGEE-V 118 Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +LEGEI ++G ++ + G S PHS+SN + R++ Sbjct: 119 IYILEGEIAQVVDGGEHIMRPGDSLHYLGSSPHSWSNKTDKPARMLWV 166 >UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VF82_SPHWW Length = 252 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 13/184 (7%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 PG L R +GLS R A +GL S +S +E K+ L L + G+ + + F Sbjct: 39 PGPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLF 98 Query: 68 SE--PEKPDEPQV----VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S P++P V +I + E S+ + ++ + + + T Sbjct: 99 STAAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVE--ARTL 156 Query: 122 ERI----KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 E +H+GEE VL G + L + L G S ++G+ H++ S G CR+ Sbjct: 157 EEYRGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRL 216 Query: 177 ISAH 180 +S Sbjct: 217 LSIC 220 >UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BBN6_PARDP Length = 211 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 6/181 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G RL +R+ Q L+ + A L+G++ SA+S IE++ +SP ++TLQ++ + LS Sbjct: 25 PLELGPRLKALRKGQQLTLQEVARLTGVSTSALSKIERNDLSPTLTTLQRIASGLQVELS 84 Query: 65 EFFSEPEKPDE---PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119 + + + + + + KL+ ++ I + + Sbjct: 85 ALLGDEPGHAPTTGRRSIARAGQGDNLNNATCNNKLLCADLKDKCFTPIRTVVKARSPED 144 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 GE TVL+GE+V+ + L G S + H +++ +I Sbjct: 145 YEAWGVSDGEIFLTVLKGELVIHSRIYEPLVLYPGDSMYYDASTEHCWTSQGDVDAELIW 204 Query: 179 A 179 Sbjct: 205 V 205 >UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11I99_MESSB Length = 198 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 5/181 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 + +R+ +GL+ A G + +S +E+ P+++ L+ L + + +S F Sbjct: 20 LASDIRRLRKARGLTLAGLASQLGRSVGWLSQVERGISLPSVADLRALANHFKVPVSFFL 79 Query: 68 SE---PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + EK + V ++ + G V +L+ R +I + T + Sbjct: 80 TPAASDEKELQVVVRADKRRKLVSGQPRVLEELLSPNLGGR-FEIICCEFAGNTPLPQPR 138 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 K EE G V+ G + + + G+ Y L AG S+ + + N ++ +P Sbjct: 139 KRAAEEAGYVVSGALDIEVTGKWYELSAGDSFRVRGETL-RWRNPHEEPAIVVWVVSPPV 197 Query: 185 F 185 + Sbjct: 198 Y 198 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 138 bits (349), Expect = 7e-32, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G + E+RQ+ L+ ++ +G++ +S IE + S ++ TL++L+ V G+SLS F Sbjct: 25 LGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALF 84 Query: 68 SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGE 122 E E ++ + E+ G + +L+ + + T + Sbjct: 85 KGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERSEPFA 144 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164 +H G E VLEG++ Q Y L AG + + IPH Sbjct: 145 AFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPH 186 >UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ Length = 213 Score = 138 bits (349), Expect = 7e-32, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + G+ L +R++ GLS + A SG++ + + IE K +P I+ L ++ + + Sbjct: 20 TKLSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQV 79 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S+ S P V ++ ++ + G + + + +++ + T + Sbjct: 80 SVPSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSED 139 Query: 122 ERIKHQG-EEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G ++ VL GEI LTI L G S N PH+ N + Sbjct: 140 VAAFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLV 199 Query: 180 HTP 182 P Sbjct: 200 VAP 202 >UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C5PR45_9SPHI Length = 205 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 77/187 (41%), Gaps = 8/187 (4%) Query: 1 MSDEGL-APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59 M D + R+ EIR+ +G++ + A+ +G++ IS +E ++ P++ L ++ Sbjct: 13 MKDNTIFKISSRIKEIRKGKGITIQDLADRAGVSKGLISQVENNRTVPSLLVLINIIGAL 72 Query: 60 GLSLSEFF--SEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFET 113 + L+EFF + P +V ++ + + ++ N T+ ++ Sbjct: 73 EIDLTEFFKGFTSDGDLGPVIVRRKEQYESFEKEHALGFMYKRIFTTSIVNSTMDIVLLE 132 Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 +P + + E +L GE+ + HL G S + + HS N+ Sbjct: 133 LEPDANR-PMVTTEAFEYKYILAGEVEYIFENEVVHLKEGDSILFDGRLSHSPRNSGTQK 191 Query: 174 CRIISAH 180 ++ + Sbjct: 192 ASMLIVY 198 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 6/173 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + L +R ++ LS + AELS ++ +S IE+ +P I+TL K+ + + Sbjct: 6 IIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVPYTLL 65 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERI 124 E+ + +I + +L S+ + + P R + G + Sbjct: 66 L---EQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRNFELFQIELDEGCSYRSVG 122 Query: 125 KH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + EE VLEGE+ L +N + Y L S + + H +SN G + Sbjct: 123 HSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKA 175 >UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=Firmicutes RepID=A9VF72_BACWK Length = 197 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 3/179 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+ + R++ ++ R A+ +G++ S IS IE+ +P+++ L+ + K + L Sbjct: 16 RLGQTVLSYRKKNNMTIREFADYAGISTSLISQIERGHANPSLNVLELIAKALNVPLFTL 75 Query: 67 F-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERI 124 F ++ + ++ + + + ++ + M+ TT Sbjct: 76 FINDIDTDSLISKKKDRKKVYRENNDHIVYDVLTPDFMKARIEMLMMDLNGYANTTESHY 135 Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+ EEI V++GE+ + + G +Y L G I + H F N S + I+ TP Sbjct: 136 SHEDKEEIAVVMKGEVYVELEGNEYFLEEGDVVRIPPNVKHRFLNKSDEMNHILFVLTP 194 >UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5V7_MAGSM Length = 183 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G R+ ++R Q+ L+Q+ A+++ + + ++T+E+D +P+++ + K+ + GLS+ + Sbjct: 7 GMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLV 66 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E+ V +Q +E +V GN IF + Q G R G Sbjct: 67 T-ERERIQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIF-SLQAGAVYEGRPHPPG 124 Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 EE VLEG + L + G+ LV G S + H + N + R + Sbjct: 125 SEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCLVTI 177 >UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria RepID=A6UEP3_SINMW Length = 234 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 8/186 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 +A G + R++ G++ A + ++ +S IE SP+++TLQ L + G+ ++ Sbjct: 44 EVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPIT 103 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT---LAMIFETYQPG 117 FF E+ + V + + +++ + G L+ + N + + T Sbjct: 104 AFFRRFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + +H G E +LEGE+V Y + G S + PH + R + Sbjct: 163 SDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRYL 222 Query: 178 SAHTPT 183 S + Sbjct: 223 SIISYP 228 >UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=C3MCD7_RHISN Length = 244 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 8/187 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 +A G + R++ G++ A + ++ +S IE SP+++TLQ L + G+ ++ Sbjct: 54 EVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPIT 113 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT---LAMIFETYQPG 117 FF E+ + V + + +++ + G L+ + N + T Sbjct: 114 SFFRGFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + +H G E +LEGE+V Y + G S + PH + R + Sbjct: 173 SDVFPTFQHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRYL 232 Query: 178 SAHTPTT 184 S + + Sbjct: 233 SIISYPS 239 >UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNA0_RHOE4 Length = 187 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 8/182 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G + GK + R +QG+ R A G++ S +S E + A++TL + LSL Sbjct: 2 GTSVGKTVRAERTRQGIPVRELARRLGVSPSFLSQFELGQSQAAVNTLFAIATELNLSLD 61 Query: 65 EFFS---EPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 +PE+ E + ++ + + GV + + N N + + Y+PG Sbjct: 62 VLLGNSVDPERESESESKTHEPRISDCLTFRSGVRWQRLANTPENHHVQFLLTEYEPGAD 121 Query: 120 TGE---RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 + H G++ G VLEG + + I+G L +G++ + +PH N + + Sbjct: 122 SAPGDAPQTHSGDDYGYVLEGTLTIDIDGMRRLLKSGEAIHLVGNVPHRLRNETDQTVKA 181 Query: 177 IS 178 I Sbjct: 182 IW 183 >UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax=Rhizobiales RepID=A8I3G0_AZOC5 Length = 217 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+ L RQ + L+ ++ AE +GL+ S +S +E ++S L +L G++++E F Sbjct: 15 LGECLKAARQARKLTLKQVAERTGLSLSTLSKVENHQMSLTYDKLLQLTNGLGIAIAELF 74 Query: 68 --------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-- 117 + P+ + + D + ++ S ++ + I + Sbjct: 75 HSAADRAPTAPQMVTARRSISRAKDGDVIDTRTYSYAYKCTDLMSKAMVPITGELRARTL 134 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G I+H GEE V G + + L G S I++ + H++ N RI Sbjct: 135 AEFGPLIRHPGEEYVYVTAGRVEVHTEYYAPEILETGDSLYIDSSMGHAYLNAGEDPARI 194 Query: 177 ISAHT 181 + T Sbjct: 195 VCVCT 199 >UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F379_9PROT Length = 180 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + +R+QQGLSQR AE +G++ +A+S +E + SP+++TL+KL G++++ F Sbjct: 3 NIGGTIRSLREQQGLSQRALAEAAGISAAALSQLEAGQTSPSVATLEKLADGLGIAIAAF 62 Query: 67 FSEPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-- 123 F + P + ++ +N+ + +G G + L P + PG E Sbjct: 63 FLDSGNPADIEIFDLNERPSVPLGQGGRFVPLTAMHQPA-GFEPMLVQLDPGGCFDENKY 121 Query: 124 -IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 IK + +G VL + + Y L QS + PH++ N S C I+ + Sbjct: 122 GIKSP-HAFVWMRKGRAVLEYDERSYELCEMQSVYYDARKPHNWRNISDTRCEILMVRS 179 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 6/175 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDE + L EIR GLS RAAEL+G++ + + IE+ + SP I+TL K+ K + Sbjct: 1 MSDESITL--NLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 L L+ E +P + +++K+V +P+ + +PG + Sbjct: 59 LPLTALIEESTRPSG---RSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSH 115 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 G E VLEG + + +G L GQ + PH + + S G Sbjct: 116 ESLPHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170 >UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Actinobacteria (class) RepID=A6W7Y3_KINRD Length = 232 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R Q + AE SGLT +S +E+D+ + +++ L +L L++ F Sbjct: 43 IGSRLRAARLAQRRTVAEVAEASGLTKGFLSRLERDRATASVAALVRLCATLDLAVGSLF 102 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126 P V I G G+ L+ R +A+I PG +G E Sbjct: 103 EP--APAGEVVRAGHYPPITFGGHGLRESLLTPA-GERRVAVIVSDLDPGGGSGAEPYAL 159 Query: 127 QGE-EIGTVLEGEIVLTING------QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + E VL GE+ L G + L AG + + HSF T R++ Sbjct: 160 DADVEFALVLAGEVELRFAGPAGSPAEAVVLRAGDALTFDPARAHSFRGTGETPARVLWV 219 Query: 180 HTPT 183 +P Sbjct: 220 VSPA 223 >UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT Length = 199 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 76/179 (42%), Gaps = 2/179 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + GK + RQ GLS A+ SG++ + +S +E+ + +P + ++ + G Sbjct: 1 MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 SL++ + + V +Q + V + + +R L + + G ++ Sbjct: 61 CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120 Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 GE + E+ TV+EG + + + G+ + L G S + N +I+ Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQIL 179 >UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae RepID=B8FLW0_DESAA Length = 184 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 6/180 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 ++ G+R+ ++R+ + + A +GL + IE + P++ +L ++ + + S Sbjct: 9 NISTGQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVD-S 67 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GER 123 FF E E + + + + + G ++ + P G Sbjct: 68 AFFLEKEVKTTKKGLAKA---YSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVS 124 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH-TP 182 +H+GEE VL G++ +T+ L G S N+G+ H N ++ TP Sbjct: 125 YQHEGEEFVYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184 >UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria RepID=A1AL86_PELPD Length = 192 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D G +++ IR+ GL++ + AE + + I+ +EQ +++P+++ L K+ + G Sbjct: 1 MTDRN-RIGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM--------GSQGVSMKLVHNGNPNRTLAMIFE 112 + L + +++ I + + + R + Sbjct: 60 VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119 Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 +P G + H+GEE +L+G + + Y L G S ++ +PH + + Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179 Query: 172 GICRIISAHTPT 183 RI++ Sbjct: 180 DSARILAVVYAP 191 >UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cellular organisms RepID=A5UJ53_METS3 Length = 193 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+++ + + + +S A S + + I ++ P+++ L K+ +V G+ + F Sbjct: 7 IGEKIKTLMEVRNVSLDELANDSDVNIELVEKILNGEIIPSLTPLTKIARVLGVRIGTFI 66 Query: 68 SEPEKPDEPQVVINQDDLI--------EMGSQGVSMKLVHNGNPNRTLAMIFETYQ-PGT 118 + E+ V + D + + + + + G +R + ++ Sbjct: 67 DDDEQTGPLVVRKGKSDKVVYFSGDENKTENSNLEFYSLAAGKSDRNMEPFIIDFKVDAE 126 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + E H+GEE VLEG I + +Y L G S ++ + H +++ +I++ Sbjct: 127 ESHELSSHEGEEFLYVLEGTIEVIYGQNNYVLETGDSIYYDSIVSHHVHSSNDETAKILA 186 Query: 179 AH-TP 182 TP Sbjct: 187 VIYTP 191 >UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AZ95_PARDP Length = 204 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 5/177 (2%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS- 68 +RL +R+++G S RAAE G+ S +S IE K+SP + L K+++ + + ++ FS Sbjct: 16 ERLRALRERKGWSLNRAAEEVGVPPSTLSRIENRKMSPTLDLLLKIVRTFDMHPNDVFSG 75 Query: 69 -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GERIK 125 ++ + V D + + K +H I T + G Sbjct: 76 RPDQQEKQEISVSRASDPALIELPNLFYKHLHPDMECFNFRAILITLFARSVEEYGGLTA 135 Query: 126 HQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H G+E +L G++ + + G L G S + IPH++ + +++ A + Sbjct: 136 HSGQEFVYLLSGKLQVHLEGHPLVTLAPGDSIMFTSSIPHAYVSAGDSQAKLLIASS 192 >UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales RepID=C8X7U0_NAKMY Length = 197 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 8/172 (4%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL +R Q+GL+ + +G++ S +S +E + P + L L Y + L + Sbjct: 19 VGPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDDLV 78 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 + PE+ D P++ + + ++ + + T E H Sbjct: 79 AAPEEGD-PRLRLKPGRVK-------GRTVIPLTRQSDGMQAWKIIIPTSNVTPETRSHD 130 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G+E VL G + + QD L G A +T +PH F +T I+S Sbjct: 131 GDEWIYVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILSI 182 >UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B57C0C Length = 213 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 3/185 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + E + G+ + E R + +S A SGL+ +S +E+ +P++S++ ++ + + Sbjct: 29 TPEAIEVGRAIRECRTARRVSMAVLAARSGLSQPFLSQLERGLATPSLSSIYRIAEALDV 88 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + F P +P + + + G +++ G + + ++PG Sbjct: 89 APGTFLRPPGRPGVVSHESDPQVIRVSEAAGQVARVLIPGGRSALMEAYEHHFEPGQGER 148 Query: 122 ERIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHS--FSNTSAGICRIIS 178 +H GE+ VLEG +VL + + L AGQS +PH ++ R + Sbjct: 149 GWFEHPGEDFLYVLEGSVVLEVRGEEPLLLTAGQSAHHRGDLPHRCVLADGGTAAARTLL 208 Query: 179 AHTPT 183 Sbjct: 209 VIASP 213 >UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burnetii RepID=B6J765_COXB1 Length = 183 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 6/179 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 +RL +RQ++ +S + A+ +G++ S I IE +V P + KL G +LSE Sbjct: 4 FAERLKRLRQERQMSMQALADAAGVSKSMICKIESTEVQPTLDVAGKLAVALGKTLSEML 63 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE---RI 124 P+ P Q+ ++ I + +Q + + + + +F + PG + + Sbjct: 64 HSPQTPSVIQLT-TEEQAIWIDAQNIKRRNISPILEGSKVEWLFVEFPPGASLTKPLTPY 122 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR--IISAHT 181 + E+ + +G + + IN Y L G S + N S + ++ T Sbjct: 123 TPETEKYILITKGVLEVKINKTIYSLKKGDSLYYDGKCASELLNPSRKVTEYYVLIVRT 181 >UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDE1_OLICO Length = 208 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 10/186 (5%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G+R+ ++R+ Q + A GLT +S +E + +P + TL KL K G L+ Sbjct: 19 SLGRRIRQLRKMQERTLDSLATEIGLTKGYLSKVETGRQTPPLGTLSKLAKALGTDLAGL 78 Query: 67 FSEP-----EKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 E+ E V+ D+ + S G + + + + T+ Sbjct: 79 VEHGPVEPAEQDFEGVSVVRADERRNVVRGATSFGYDYQSLVQNATGKHMTPFLFTFPSQ 138 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +H GEE+ VL G + + + Y L+ G + H G + + Sbjct: 139 ILKEVFFEHGGEEMIFVLSGVVEFEVGNETYELMPGDCIYFDPRQRHRGRGKY-GEAKAL 197 Query: 178 SAHTPT 183 Sbjct: 198 VVLYEP 203 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C... 198 9e-50 UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin... 196 2e-49 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 195 4e-49 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 194 2e-48 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 192 4e-48 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 192 6e-48 UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl... 191 7e-48 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 189 3e-47 UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De... 189 3e-47 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 189 4e-47 UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost... 189 5e-47 UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni... 188 1e-46 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 186 2e-46 UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti... 186 3e-46 UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax... 185 5e-46 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 185 5e-46 UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th... 185 6e-46 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 184 1e-45 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 183 2e-45 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 183 3e-45 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 183 3e-45 UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ... 181 9e-45 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 181 1e-44 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 181 1e-44 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 180 1e-44 UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F... 179 3e-44 UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P... 179 5e-44 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 178 7e-44 UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7... 178 8e-44 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 177 2e-43 UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil... 177 2e-43 UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga... 177 2e-43 UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi... 176 2e-43 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 176 2e-43 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 176 3e-43 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 176 3e-43 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 176 3e-43 UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob... 176 4e-43 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 175 7e-43 UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh... 174 9e-43 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 174 1e-42 UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo... 174 1e-42 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 174 1e-42 UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ... 174 2e-42 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 174 2e-42 UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill... 173 2e-42 UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C... 173 2e-42 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 173 3e-42 UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin... 173 3e-42 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 173 3e-42 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 173 3e-42 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 173 3e-42 UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin... 173 3e-42 UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do... 172 5e-42 UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD 172 5e-42 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 171 9e-42 UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu... 171 1e-41 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 171 1e-41 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 171 1e-41 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 170 2e-41 UniRef50_A5V718 Transcriptional regulator, XRE family with cupin... 170 2e-41 UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi... 170 2e-41 UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh... 170 2e-41 UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr... 170 2e-41 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 169 3e-41 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 169 4e-41 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 169 4e-41 UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin... 169 4e-41 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 168 8e-41 UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin... 168 8e-41 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 168 1e-40 UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin... 168 1e-40 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 167 2e-40 UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin... 166 2e-40 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 166 3e-40 UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot... 166 3e-40 UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin... 166 3e-40 UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R... 166 3e-40 UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein... 166 3e-40 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 165 5e-40 UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag... 165 5e-40 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 165 5e-40 UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax... 165 5e-40 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 165 6e-40 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 165 6e-40 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 165 7e-40 UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria... 165 8e-40 UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin... 165 8e-40 UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax... 165 8e-40 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 164 9e-40 UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin... 164 1e-39 UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba... 164 1e-39 UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha... 164 1e-39 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 164 1e-39 UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo... 164 1e-39 UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep... 164 1e-39 UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B... 164 2e-39 UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba... 164 2e-39 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 164 2e-39 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 163 2e-39 UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu... 163 2e-39 UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi... 163 2e-39 UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl... 163 3e-39 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 163 3e-39 UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni... 163 3e-39 UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostri... 163 3e-39 UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B... 163 3e-39 UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat... 163 3e-39 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 162 4e-39 UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 162 4e-39 UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe... 162 4e-39 UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid... 162 5e-39 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 162 5e-39 UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi... 162 5e-39 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 162 5e-39 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 162 6e-39 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 162 6e-39 UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu... 162 6e-39 UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin... 162 6e-39 UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr... 161 7e-39 UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F... 161 8e-39 UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria... 161 9e-39 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 161 1e-38 UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P... 161 1e-38 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 161 1e-38 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 161 1e-38 UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=... 161 1e-38 UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator... 160 2e-38 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 160 2e-38 UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ... 160 2e-38 UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca... 160 3e-38 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 160 3e-38 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 159 3e-38 UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De... 159 3e-38 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 159 4e-38 UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI... 159 5e-38 UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa... 159 5e-38 UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ... 159 5e-38 UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Aci... 159 6e-38 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 159 6e-38 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 158 6e-38 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 158 6e-38 UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein... 158 7e-38 UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa... 158 7e-38 UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr... 158 8e-38 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 158 9e-38 UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rh... 158 9e-38 UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseu... 158 9e-38 UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean... 158 1e-37 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 158 1e-37 UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A... 158 1e-37 UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ... 157 2e-37 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 157 2e-37 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 157 2e-37 UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Pr... 157 2e-37 UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Bu... 157 2e-37 UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH... 157 2e-37 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 156 2e-37 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 156 2e-37 UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th... 156 3e-37 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 156 3e-37 UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos... 156 3e-37 UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B... 156 3e-37 UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr... 156 4e-37 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 156 4e-37 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 156 5e-37 UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy... 155 6e-37 UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus claus... 155 7e-37 UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Ve... 155 7e-37 UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=R... 155 8e-37 UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=My... 155 8e-37 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 154 1e-36 UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro... 154 1e-36 UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc... 154 1e-36 UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium th... 154 1e-36 UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu... 154 1e-36 UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin... 154 1e-36 UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Ac... 154 1e-36 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 154 1e-36 UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De... 154 1e-36 UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales Re... 154 2e-36 UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxid... 154 2e-36 UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Op... 154 2e-36 UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri... 154 2e-36 UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cel... 154 2e-36 UniRef50_A6G914 Transcriptional regulator, XRE family with cupin... 154 2e-36 UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Cl... 153 2e-36 UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa... 153 2e-36 UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh... 153 2e-36 UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Pa... 153 2e-36 UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B... 153 2e-36 UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax... 153 2e-36 UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B... 153 3e-36 UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rh... 153 3e-36 UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax... 153 3e-36 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 153 4e-36 UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 ... 152 5e-36 UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria Re... 152 5e-36 UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium sm... 152 6e-36 UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Co... 152 6e-36 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 152 7e-36 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 152 7e-36 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 151 8e-36 UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri... 151 8e-36 UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusob... 151 8e-36 UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sph... 151 1e-35 UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax... 151 1e-35 UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter... 151 1e-35 UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Ch... 151 1e-35 UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacusca... 151 1e-35 UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID... 151 2e-35 UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteoba... 150 2e-35 UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID... 150 2e-35 UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De... 150 2e-35 UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Bu... 150 2e-35 UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax... 150 2e-35 UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S... 150 2e-35 UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord... 150 2e-35 UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B... 150 3e-35 UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac... 149 3e-35 UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De... 149 3e-35 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 149 3e-35 UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Va... 149 4e-35 UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hy... 149 4e-35 UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Na... 149 4e-35 UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=... 149 4e-35 UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enter... 149 4e-35 UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin... 149 5e-35 UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Ba... 149 5e-35 UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepI... 149 5e-35 UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=B... 149 5e-35 UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax... 149 5e-35 UniRef50_B2JNZ3 Transcriptional regulator, XRE family n=4 Tax=Bu... 148 6e-35 UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp... 148 7e-35 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 148 7e-35 UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac... 148 7e-35 UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin... 148 7e-35 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 148 8e-35 UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Vi... 148 8e-35 UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh... 148 8e-35 UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B... 148 8e-35 UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=... 148 8e-35 UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum... 148 9e-35 UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin... 148 1e-34 UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1... 148 1e-34 UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri... 148 1e-34 UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi... 148 1e-34 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 148 1e-34 UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Fr... 148 1e-34 UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax... 148 1e-34 Sequences not found previously or not previously below threshold: >UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ Length = 274 Score = 198 bits (504), Expect = 9e-50, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 2/183 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 +A G++L +R+++GL+ ++ +G++ S +S IE +V+ +I+TLQKL Y +L Sbjct: 93 PRIAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNL 152 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 FF + ++ V ++E +G+ ++L+ + + T PG E Sbjct: 153 LYFFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTA-LNEPAMEPLLYTVAPGAGRNEN 211 Query: 124 IKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 I H+GEE VL+G + + ++ + Y + G S + H + N + +TP Sbjct: 212 ISHEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTP 271 Query: 183 TTF 185 TF Sbjct: 272 PTF 274 >UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Clostridiales RepID=A3DDF7_CLOTH Length = 179 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 1/180 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G ++ ++R ++Q A+ + L+ IS IE D SP+I+TL +L+ G L Sbjct: 1 MQIGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKT 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FFS+ E + +++ V + + I T QPG + E Sbjct: 61 FFSDSE-DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLEDHP 119 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G V++G I + I + Y + G+S+ + H N ++I TP TF Sbjct: 120 HEGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPPTF 179 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 195 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ +R+++GL+ A+ S LT IS +E++ P+I L + + G+++ FF Sbjct: 29 LGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFF 88 Query: 68 SEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 + + P++ V+ + +++ + + + P R L + + PGT + E Sbjct: 89 ASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYS 148 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G VL G L + + + L G S++ ++ PH + N ++ TP TF Sbjct: 149 HEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 2/182 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GK + E+R + ++ R A+ SG + S +S +E+D +SP +++L+K+ G++++ Sbjct: 1 MEFGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITS 60 Query: 66 FFSEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FFS + + VV + + V + + + N L ++ G +G+ Sbjct: 61 FFSGDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDY 120 Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEE V++G++ +T++G+ L G S N+ +PH + NT G ++ +TP Sbjct: 121 NIHLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPP 180 Query: 184 TF 185 TF Sbjct: 181 TF 182 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+ + ++RQ + L + +E +G++ +S IE+ +V ++ +L K+ K + L F Sbjct: 14 EIGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSF 73 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERIK 125 F E + V +++ V +L+ + NR + M+ T + G E++ Sbjct: 74 FEELNREKVSVVRKEDRKQLDIPRSNVIYQLLSP-DMNRKIEMLLVTLKSGEVEEHEKVT 132 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE G V++G++ +T+ + L G S ++ IPH F N + A TP +F Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK++ ++R+++G+S + AE +GLT S +S +E+D P+I++L+K+ + + + F Sbjct: 2 LGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFL 61 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126 PE P V +Q ++ ++ +L+ NR + ++ +PG + E + H Sbjct: 62 LNPEDHS-PVVRKDQRKVLRFPQSHLTYELLSPDL-NRNMEVMMARLEPGAASCDEPLAH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VL+G + + I G+ + + G S IPH + ISA TP F Sbjct: 120 PGEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178 >UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYK9_9CLOT Length = 181 Score = 191 bits (487), Expect = 7e-48, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 +++ ++R+++ L+ + + +GL+ S +S +E + S AI++L+K+ G++++ F Sbjct: 4 EIAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F PE + V + ++ + PNR L + T P G H Sbjct: 64 FEIPEVNN-FLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNFSH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG + + I+ +Y++ AG S + H + N S +I++ TP F Sbjct: 123 PGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLIF 181 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS G+ + +R+ + L+ AE +GL+ IS IE+ + P+++ L ++ + G Sbjct: 21 MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80 Query: 61 LSLSEFFSEPEKPDE---------------PQVVINQDDLIEMGSQGVSMKLVHNGNPNR 105 +S+S FF PE PD +V + G+ +L+ G + Sbjct: 81 VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140 Query: 106 TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHS 165 L ++ + PG+ H+GEE G VL G + L + + L AG S+A ++ PH Sbjct: 141 -LELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199 Query: 166 FSNTSAGICRIISAHTPTTF 185 + N S +I A TP +F Sbjct: 200 YRNPSETETIVIWALTPPSF 219 >UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales RepID=Q3A2S3_PELCD Length = 188 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + L G++L +R L+Q + LT IS +E D P+I+TL+ +L V+G+S Sbjct: 2 ERNLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVS 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + EFF++P E + + ++L+ G NR + T +PG E Sbjct: 62 MQEFFTDP-VDTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEMEE 120 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H+GEE G VL G I + ++ + Y + + + + HS N G RI+ TP Sbjct: 121 QDFHEGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVVTP 180 Query: 183 TTF 185 TF Sbjct: 181 PTF 183 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 +++ +R+++ L+ + +E +GL+ S +S +E + S AI++L+K+ + ++ F Sbjct: 4 EIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F PE V + ++ E+ + R + I G + H Sbjct: 64 FKSPELHK-FLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG I+ I+G++Y + G S + IPH SN +I++ P F Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181 >UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile RepID=Q186J9_CLOD6 Length = 187 Score = 189 bits (480), Expect = 5e-47, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 2/187 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G ++ +R+ + +S A+ S L+ IS IE++ V P+I + K+ K Sbjct: 1 MYLMNIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALD 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQ-DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 +++ FF E + D VV I +L+ + + I T T Sbjct: 61 INIGYFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTH 120 Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E + H+GEE G +++G++ +T+ ++Y L G S+ N+ IPH + N +C + Sbjct: 121 KNSEFVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVW 180 Query: 179 AHTPTTF 185 A TP +F Sbjct: 181 AMTPPSF 187 >UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJP6_9BACT Length = 178 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G +L EIR++ ++ ++ +G T S IS IE K SP+I++L+K+ G ++SE Sbjct: 1 MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124 F E + + D ++ +SM + + NR + I P TG + Sbjct: 61 LF---EDERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYY 117 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 H GEE+G V+EG+I + I +++L G+ ++ +PH N + TP + Sbjct: 118 HHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPPS 177 Query: 185 F 185 F Sbjct: 178 F 178 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 4/186 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + GK++ + R + G+S R A+ SGLT S +S IE+D V+P+I TL+ + + Sbjct: 1 MED--INLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALD 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + + +FF + E + V ++ I ++ L+ + + PG T+ Sbjct: 59 VPMFKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGS-IEFCMMSIPPGLTS 117 Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + H GEE+ V+ G + + + G Y L G S I H + N + ++I A Sbjct: 118 GRNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFA 177 Query: 180 HTPTTF 185 TP +F Sbjct: 178 ITPPSF 183 >UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMV2_MOBAS Length = 193 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + G++L +R LS ++ A G + S +S +E +V+P ++ L+KL+ G+ Sbjct: 6 NSVPQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGI 65 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPG 117 +++ F ++ + +I +G G+ ++ + P L PG Sbjct: 66 NIAFLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPG 125 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +T H GEEIG VLEG LT+ G + L G S+A + PH + N + R++ Sbjct: 126 GSTDGAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVL 185 Query: 178 SAHTPTTF 185 +TP TF Sbjct: 186 WVNTPPTF 193 >UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax=Gammaproteobacteria RepID=PUUR_ECOLI Length = 185 Score = 185 bits (471), Expect = 5e-46, Method: Composition-based stats. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG Sbjct: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT Sbjct: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 Query: 181 TPTTF 185 TPTTF Sbjct: 181 TPTTF 185 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 185 bits (471), Expect = 5e-46, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G++L ++R +GL+Q AE + L+ S IS +E DK SP+I TL+++L+ G L Sbjct: 13 VRIGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKH 72 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FFS+ E+ + + +GV +++ +G ++ + I T +PG T E Sbjct: 73 FFSDVEEERV-VFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESY 131 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+G E G V++G I L ++ + Y L G + H N+ ++ Sbjct: 132 HEGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186 >UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3B6_THELT Length = 185 Score = 185 bits (471), Expect = 6e-46, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 4/187 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ E G+++ +RQ + L+ R A+LSG+T IS IE KVSP++STL+ +L G Sbjct: 1 MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60 Query: 61 LSLSEFFSEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 ++ + + +V ++ + S G++ +L+ + N +M +PG Sbjct: 61 ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLS--SKNNAYSMFISYLEPGAD 118 Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + H+G E G V++GE+ +T+ + L G S + IPH + N + Sbjct: 119 SRESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVW 178 Query: 179 AHTPTTF 185 +P +F Sbjct: 179 VVSPPSF 185 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 2/183 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G L +R+ +GLSQR A+ +G+T+S IS IE++ VSP++S+L+K+L +SL Sbjct: 26 NLDIGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLV 85 Query: 65 EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 +FFS E E +VV D+L+++G+ + KL+ PNR ++++ ETY PG+ TGE Sbjct: 86 DFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEE 145 Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + KH+GEE V+EG+ LT+ + Y L AG SY N+ +PH F N CR++SA TP Sbjct: 146 MLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTP 205 Query: 183 TTF 185 F Sbjct: 206 ANF 208 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 +++ +R Q+ ++ + +E +GL+ S +S +E+ S AI++L+K+ + ++ F Sbjct: 3 EIFEKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASF 62 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F+ ++ ++ + R L + T+ PG H Sbjct: 63 FANY-SNTNFTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQPNTFCH 121 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE VLEG ++ ++G++ + G + + +PH + N +++ TP F Sbjct: 122 PGEEFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 8/185 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R+ +R+++ L+ R AE +G++ IS IE+ +P+ +TL +L + + + Sbjct: 19 DLGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQL 78 Query: 67 FSEPEKPDEPQVVINQDDLIE----MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 PE V N+ ++ G S +L+ L + PG T Sbjct: 79 LEAPESKSV-VVRKNERRRLDGHGLANDDGGSYELLTPDLNG-ALEATWVVTPPGYDTSA 136 Query: 123 -RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180 H GEE G VL G + ++G + L AG S + IPH + N S C I Sbjct: 137 TPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIWVS 196 Query: 181 TPTTF 185 TP T+ Sbjct: 197 TPPTW 201 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 183 bits (464), Expect = 3e-45, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 1/185 (0%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +++ G+A G ++ +RQ+ + A +G++ +S +E+ SP+I++L + G Sbjct: 53 LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +++ F P + +Q + N R L I PG Sbjct: 113 VTVQYFVETP-SEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQKR 171 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E H GEE V+EGE+ LT+ G+ + L AG S + +PHS+ NT+ ++ Sbjct: 172 SEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVWVG 231 Query: 181 TPTTF 185 TP F Sbjct: 232 TPRLF 236 >UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN Length = 185 Score = 181 bits (460), Expect = 9e-45, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 5/184 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E + G++L ++R ++GL+Q A L+ IS +E+D SP+I+TL +L+ G +L Sbjct: 5 ELMNIGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNL 64 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM--KLVHNGNPNRTLAMIFETYQPGTTTG 121 +FF+ E E ++V +++D+ E ++ + V + I T +P Sbjct: 65 KDFFNNDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYK 121 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE G VL G + + + + Y G+S+ H SN + +++ T Sbjct: 122 NDEPHEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVST 181 Query: 182 PTTF 185 P F Sbjct: 182 PPYF 185 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL +R +GLS + AE G++ +S IE+ +S +++TL+KL K Y L++ + Sbjct: 117 NVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDL 176 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125 F + +V + S GV M+L+ GNP + PG +G E Sbjct: 177 F--DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP--VMEPHLFHVAPGAGSGDEEYS 232 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+GEE VL G + L ++G++Y L G S+ + PH +SNT + ++ +TP TF Sbjct: 233 HEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPPTF 292 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R GL + A + + S +S +E VSP+I+ L ++ KV +++S Sbjct: 21 DVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNIS 80 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 F+ E+ ++ G++++ + + L PG + Sbjct: 81 GLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAAS 140 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 I+H+GEE+G V+EG + LT+ Q L AG S+ ++ PHS+ N + R++ + Sbjct: 141 DGAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVN 200 Query: 181 TPTTF 185 +P ++ Sbjct: 201 SPPSY 205 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D L GK L+ IR+Q+GLS + AEL+G++ ++ IE+ +P ++TL K+ Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S F E + N ++E + + + + R + +PG Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVY-PLFPYDNTRRFEVFTIELEPGCNH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 ++G EE V +GE+ I Y L G + PH + NT+ I Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEIVIF 176 >UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium RepID=A5TRU5_FUSNP Length = 184 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 4/184 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G++L + R +G+S R A L+ S +S IEQ K SP+I L+K+ + ++ Sbjct: 1 MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAY 60 Query: 66 FFSEPEKPDEPQVVINQD--DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122 + E I ++ IE + M ++ + N + + I +G + Sbjct: 61 LIEDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRD 120 Query: 123 RIKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H EE +LEGE+ + + + Y L G S + + H F NTS + + + Sbjct: 121 FYSHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVS 180 Query: 182 PTTF 185 P TF Sbjct: 181 PPTF 184 >UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=B2JW16_BURP8 Length = 234 Score = 179 bits (454), Expect = 5e-44, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R Q L+ + AE +G + S +S +E +P+++TL ++ +++ Sbjct: 45 LGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIAALV 104 Query: 68 SEPEKPDEPQVVINQDDLIEMG------------SQGVSMKLVHNGNPNRTLAMIFETYQ 115 S P P ++ + + ++ + P + L + Sbjct: 105 SGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIHVLE 164 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 P + E+I H GEE+G VLEGE+ LT+ + Y L AG S+ + PHS+ N I R Sbjct: 165 PLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGDVITR 224 Query: 176 IISAHTPTTF 185 ++ +TP TF Sbjct: 225 VLWINTPPTF 234 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 178 bits (452), Expect = 7e-44, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G +L EIR ++ LS AA+L+G++ + + IE+ + +P +STL K+ Sbjct: 1 MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S F E + E N D +IE ++ + + NR + + G Sbjct: 61 VSFSFFIDEEQDELEIVDQNNIDPIIEDDARMKLY-PIFPFDANRGFEIFTIELESGCNH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G EE V +GE+ + I+ Q Y L G S IPH + N S Sbjct: 120 VSTPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKAIF 176 >UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL Length = 189 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 2/181 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 GK++ ++R + L+ + +E + L+ +S +E+ + AI +L K+ K +SL+ F Sbjct: 4 DIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RI 124 F P+K + + + +++++ + + N +++ P + Sbjct: 64 FQAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENIISY 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H+GEE VLEG + L IN + L G S ++ I H+++N ++ R+++ HTP Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183 Query: 185 F 185 F Sbjct: 184 F 184 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 1/179 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G ++ +RQ+ + A +G++ +S +E+ SP++++L + + G+++ F Sbjct: 16 ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 P + Q + N + R L I PG E H Sbjct: 76 VDTP-SEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVTTH 134 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE V+EGE+ LT+ G+ + L AG S + +PHS++NT+ ++ TP F Sbjct: 135 AGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRLF 193 >UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LQ1_BACLD Length = 183 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 2/184 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ + + +R+ + S + + ++G++ ++ IE+ SP I+TL K+ Sbjct: 1 MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S + P V ++ + G + + + + + + PG Sbjct: 61 VSFTSLAERPAGEPT-VVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGCVH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H G EE V +G + +T L G + H++ N + + Sbjct: 120 ESEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTASCYTL 179 Query: 180 HTPT 183 Sbjct: 180 IYYP 183 >UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KY58_9GAMM Length = 219 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 6/190 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 ++ + G + ++R+ +G++ +++S L+ +S +E+ P+I L + + G Sbjct: 31 LAKTDRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALG 90 Query: 61 LSLSEFF----SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 +++S FF + + VV + + + G+ +L+ R + M+ T+ P Sbjct: 91 VTISWFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNLS-RQIEMLKCTFPP 149 Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 GT++G+ HQGEE G +L G++ L I L G S+A + H ++N Sbjct: 150 GTSSGDVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETV 209 Query: 176 IISAHTPTTF 185 +I TP ++ Sbjct: 210 VIWTITPPSY 219 >UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWJ8_9PLAN Length = 183 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 1/176 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L +R+ E+R GL+ AE +G+T IS IE +V+P++ TL K+ + +G+S ++ Sbjct: 4 LQLSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTAD 63 Query: 66 FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + ++ + VV ++ I + + + + + + QPG E++ Sbjct: 64 LLAGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKL 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+GEE V++G I + Y L G + + H+ N I R+I + Sbjct: 124 AHEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVY 179 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 8/188 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS E G R+ ++R + L+ + A +G + + IS IE D VSP I+TL K+ K + Sbjct: 1 MSSE-YNIGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFD 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFET 113 + L++FFSE E +VV I E QG + + N+ + T Sbjct: 60 VKLAQFFSEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVT 119 Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 H GEE V+ G + Q L G S + + H + Sbjct: 120 LTEKAPEANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKE 179 Query: 174 CRIISAHT 181 R++ T Sbjct: 180 VRVLVVVT 187 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 3/176 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ E R +GL+ R+ A+ +G++ IS +E+ P++ T++++ +V + L F EP Sbjct: 5 RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64 Query: 71 EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGE 129 ++ + + I ++ G L ++ +PG ++ E H E Sbjct: 65 DEETVAVIRHDDRYRISSPHHAITYTRASPG--GAKLEVLEGVLEPGGVSSDELRSHPSE 122 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 E V+ G + + + Q + L G S ++ +PH F N R + + TP ++ Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L Sbjct: 97 QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 156 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118 FF ++ VV + L G + + +R + + + + Sbjct: 157 DHFFKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDS 216 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E +H E VL G +V+ ++G++ L AG + ++ +PHS+ I + Sbjct: 217 PPSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISSALV 276 Query: 179 AHTP 182 +P Sbjct: 277 VISP 280 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+RLS +R + GL+ A +G++ +S IE+ +P+ +TL KL + + FF Sbjct: 31 LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90 Query: 68 SEPEKPDEP--QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124 E EP V + + +G+ +L+ R L M+ PG + Sbjct: 91 DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPH 149 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 +H+GEE+ +LEG + +T+ G++ L AG + + +PH F N I+ A TP + Sbjct: 150 RHEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPS 209 Query: 185 F 185 F Sbjct: 210 F 210 >UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JLN2_AGRRK Length = 205 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL RQ G++ + A + + S +S IE K SP++ L +L++V G ++ Sbjct: 23 RLGTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWM 82 Query: 67 FSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 F E + + LI + +G+S++ + +P L +PG + Sbjct: 83 FEEADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAG 142 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 I+H GEE+G +L G I L + + + L G S+ + +PH + N I +TP Sbjct: 143 PIQHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTP 202 Query: 183 TTF 185 TF Sbjct: 203 ATF 205 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 6/183 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + G ++ + R+ +GL+ ++ SGL+ +S IE+ SP++ ++ ++ G+ L Sbjct: 12 QKMGLGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPL 71 Query: 64 SEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 S F + V +++G+ GV+ +L+ + + + +PG Sbjct: 72 SWLFDNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGG-EMQIYLVSIRPGGQ 130 Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +G E H+GEE G VL G + LT++ + L G S+ + + H F+N ++ Sbjct: 131 SGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVW 190 Query: 179 AHT 181 A++ Sbjct: 191 ANS 193 >UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UFY6_METS4 Length = 201 Score = 174 bits (443), Expect = 9e-43, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 6/188 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +++ L G+++ +R+ +GL+ ++ A G++ +S IE+++ I L+++ + G+ Sbjct: 16 NEQELLLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGV 75 Query: 62 SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 LS FF P + + V + + G++ +L+ L ++ T PG Sbjct: 76 QLSWFFQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNLNG-PLEVLLSTIAPG 134 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + + + H G E G VL G + L I + + L G S++ ++ H +N +++ Sbjct: 135 SDS-DFYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVV 193 Query: 178 SAHTPTTF 185 TP + Sbjct: 194 WIITPPHY 201 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 4/177 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G R+ + R Q+G++ + AE SGL+ + +E DK SP++ L +L G+ ++ Sbjct: 8 MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124 E V N M +G+S++L+ P R+L M+ PG T G+ Sbjct: 68 LLISQE-ERAHVVRANARQGYSMNGEGLSVQLLSA--PGRSLKMMLLELAPGAATGGDNH 124 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE VL+G + ++ L G S N IPH N RI+ T Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181 >UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus RepID=Q0S834_RHOSR Length = 187 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 4/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 +A G + R GL+ R A +GL+ +S E P++ L ++ +V G + Sbjct: 8 LAVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTA 67 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + + V + + V L R + T QPG+ GE Sbjct: 68 HALLEQGARTPTSLVRSREGRRFALSDGAV---LRFCSTGVRAMEPNEVTAQPGSQAGEH 124 Query: 124 IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 +H GEE V++G + + + + Y L G + +PH + N +A R + TP Sbjct: 125 TEHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLITSTP 184 Query: 183 TTF 185 +F Sbjct: 185 PSF 187 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%) Query: 1 MSDEGLA-----PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL 55 MS+ G R+ E+R+ +GL+ ++ A +GL+ +S +E+ P++ L + Sbjct: 1 MSETAPRQTTPIIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVI 60 Query: 56 LKVYGLSLSEFFSEPE---KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE 112 G+ ++ FF +P+ P+ VV S GV +L+ L +I Sbjct: 61 STALGVGINWFFPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSG-QLELIVT 119 Query: 113 TYQPGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 T+ PG +G E H+GEE G ++EG++ +T+ + L G + + IPH + N Sbjct: 120 TFDPGAGSGAELYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGP 179 Query: 172 GICRIISAHTPTTF 185 G +I A TP + Sbjct: 180 GRTVMIWAVTPPYY 193 >UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN Length = 189 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 81/175 (46%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + +R + + ++ AE + L+ S +S +E+ K S + +L+K+ + G+S F Sbjct: 4 TIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 FS QV + + + + + N TL I T P G H Sbjct: 64 FSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVH 123 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 QG+E VLEG + + + +++ L G S +++ +PH++ N + + R + ++ Sbjct: 124 QGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 4/180 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G+ + +RQ+ GLS + A +GL++ IS +E+ + P+I TL+ L + +S Sbjct: 23 DQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPIS 82 Query: 65 EFF--SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121 FF ++P V N L+ + + GV + + L + T PG ++G Sbjct: 83 YFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKG-QLELYELTLNPGASSGT 141 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + ++H GE+ G +L G + L ++ Q + L AG S+ + +PH F N + R+I T Sbjct: 142 DFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201 >UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDG4_BREBN Length = 185 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G+ + IR+++ LS + +E++G++ + + IE+ K +P I+TL K+ Sbjct: 1 MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LS S S+ KP+ V + + I + + NP + + T +PG Sbjct: 61 LSFSSLISQY-KPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G EE V EG + + +N Q Y + + PH + N I + Sbjct: 120 IAEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVKCSVI 179 Query: 180 H 180 Sbjct: 180 I 180 >UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA Length = 185 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 3/185 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D+ + G + IR ++GL + AE ++ S +S IE+ +P+++T++ + + + Sbjct: 2 DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--TT 120 L +FF EPEK D ++ ++D + ++ + +L+ P + + T+ T+ Sbjct: 62 LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTN-IECMKMTFTEKNAETS 120 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H+GEE+ +L G++ +TI Q + G S I PH ++N +AG ++ + Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180 Query: 181 TPTTF 185 TP F Sbjct: 181 TPPEF 185 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 105/180 (58%), Gaps = 2/180 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G R +R++ GLSQR A+ +G+T+ IS IE + VSP++++L KLL S++EF Sbjct: 4 EIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEF 63 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125 F+ E P Q + E+G +S + + + + +R + M+ ET PG TG+ + Sbjct: 64 FAVDE-PKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLA 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 H+G+E G +++GE+ LT++ + L G SY ++ H F NTS C I+SA++P +F Sbjct: 123 HEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182 >UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=C3MAN4_RHISN Length = 220 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 2/182 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R LSQR A+ +G+T+S IS IE + +P++ L+++L + L+ Sbjct: 40 SVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLA 99 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 EFFS E + ++L+E+G +S + + + R+L ++ E YQPG TG+ + Sbjct: 100 EFFSF-EPERPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVL 158 Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H+GEE G VL G + +T++ + L G +Y + PH F C +ISA TP Sbjct: 159 LVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPP 218 Query: 184 TF 185 TF Sbjct: 219 TF 220 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 2/182 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G RL +R+ LSQR A SG+T++ IS IEQ++VSP+IS+L+KLL+ ++L++ Sbjct: 22 MDTGARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLAD 81 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124 FF+ + P + Q V D ++G GV + LV P+R + + E Y PG +GE Sbjct: 82 FFTFDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPI 141 Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 +GEE G V G + LTI+GQ L G Y T +PH F N IIS++TP Sbjct: 142 VHSEGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPA 201 Query: 184 TF 185 F Sbjct: 202 NF 203 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 7/184 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G+++ ++RQ+Q L+ + +ELSGL+ +S IE D+V+P I+TL K+ K + + Sbjct: 12 ELRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIH 71 Query: 65 EFFSEPEKPDEPQVVINQDDLIE------MGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 FF E E + + G + + G ++ + ++ Sbjct: 72 YFFEEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTE 131 Query: 119 TTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +H G E +LEGE+ L G S ++ PH + + + Sbjct: 132 WDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAV 191 Query: 178 SAHT 181 + Sbjct: 192 AVLY 195 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 2/181 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M G+ L IR+ +GLS AEL+G++ + + IE+ +P IS L +++ G Sbjct: 1 MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S + E E + V + + + + + N PG Sbjct: 61 ISFTTLIEEAE-TEVTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGCDH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + G EE V +GE+ L + Y + AG S + PH + N + + Sbjct: 120 GSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFYTI 179 Query: 180 H 180 Sbjct: 180 I 180 >UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7 Tax=Rhodobacteraceae RepID=Q28QP9_JANSC Length = 205 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ A G + + R+Q L+ + + +GL+ +S +E+ + +P++ TL ++ + + Sbjct: 6 SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L F + P KP + + + + V P L+ PG + Sbjct: 66 ELEYFIATP-KPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYAS- 123 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E + H+GEEI +L GEI T+ GQ + L G S + PHS+SN + RI+ T Sbjct: 124 EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWTGT 183 >UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2 Tax=Bacteria RepID=C1ZLV1_PLALI Length = 189 Score = 172 bits (437), Expect = 5e-42, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 3/179 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + +R+ R Q L+ + A +GLT S S +E +++P++ +L ++ G+S+S+ Sbjct: 4 VELAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSD 63 Query: 66 FFSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 ++ + V+ + + + + + + + P+R + T G + Sbjct: 64 LVEGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRKD 123 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H+GEE VL G++ L N + L G S + PH N R++ Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCVFY 182 >UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD Length = 189 Score = 172 bits (437), Expect = 5e-42, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 10/185 (5%) Query: 1 MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M+ E L G+RL IR +G++ + A+ +G++ + IE+ + +P +STL K+ Sbjct: 1 MNKEMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATG 60 Query: 59 YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPG 117 +S + F E VI +D ++ + + + + ++ + + G Sbjct: 61 LHVSFTAFI---EDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAG 117 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 T QG E V +G + + I + Y L G H + N S+ Sbjct: 118 TDHTSEGHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEA-- 175 Query: 177 ISAHT 181 T Sbjct: 176 -CVFT 179 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 171 bits (434), Expect = 9e-42, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G+R+ E+R + GL+ + A+ SG++ +S +E+DK +P++ TL + G+ + F Sbjct: 21 AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 S P KP + + + + + + P TL+ + G + E H Sbjct: 81 ISTP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYAS-EITAH 138 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 GEE+ VL+G + T+ + L G S PHSF+N R++ T Sbjct: 139 VGEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSP 195 >UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia multivorans RepID=A9ABP2_BURM1 Length = 281 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + G+R+ +R++ + A + L+ +S +E+ +IS+L + K Sbjct: 1 MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + L +P + +P + + + + + L + G + Sbjct: 61 VPLGALIDQP-RQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRS 119 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H G+E VL G I TI +DY L G S + H +N G +I+ Sbjct: 120 -EWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178 Query: 181 TPTTF 185 T F Sbjct: 179 TLPLF 183 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL ++R+Q GL+ R A +GL+ + +S IE + P+I++L+KL + + ++ F Sbjct: 25 LGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLF 84 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-H 126 EP+ P + L+ + ++ + V G + L ++ PG + E + H Sbjct: 85 HEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGD--LEVLRSVLAPGDVSAEGPRGH 142 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 E VL GE+V+TI D+ LVAG++ ++ PH + N SA I+ TP T Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 2/186 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M G ++ IR+++G + A +GL+ +S +E+ P++ +L K+ K Sbjct: 1 MRLPIETIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALE 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + FF + ++ + + + + L+ G + L M+ PG Sbjct: 61 SPIIHFFEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK-LGMLEVRLMPGEMA 119 Query: 121 GERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 ++ + +GEE TV+ G + N +++ L AG S + ++ HS NT +I + Sbjct: 120 VDKFVQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWS 179 Query: 180 HTPTTF 185 P F Sbjct: 180 VNPPQF 185 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 4/185 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ G ++ +R+ +G++ R +E++GL+ + +S IE+ +P+ +TL +L + Sbjct: 14 SELLATVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDI 73 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 + FF ++ P V + + S G ++ + + + T+ + + PG Sbjct: 74 PVGRFFIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGH 133 Query: 119 TTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 T H GEE ++ G + ++G Y L G S ++ IPH + N+ +C I Sbjct: 134 DTSATPFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAI 193 Query: 178 SAHTP 182 + P Sbjct: 194 WVNAP 198 >UniRef50_A5V718 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V718_SPHWW Length = 201 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 3/184 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D ++ G+ + + R++ L+ A S L+ S IS E+ K +P+I +L +L + + Sbjct: 11 TDPMMSFGELIRDRRKRLKLTLNEVALRSDLSVSFISLAERGKATPSIVSLLRLAQALDV 70 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 +S F + P+ + + D V+ + G+ N+ + PG Sbjct: 71 DISYFLAPPQTNN--ILHRAADPEYYPIDSPVTYIRLSAGHVNQKMDSFIYIIPPGPIF- 127 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 R+ GE +LEGE+ + + L G S +T ++ N +++ T Sbjct: 128 PRVHRDGESFYYMLEGELHFEVGDDSFDLGPGDSLHFDTRHSYAMRNCGEKPVKVLWVGT 187 Query: 182 PTTF 185 P F Sbjct: 188 PVLF 191 >UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio RepID=A6CYI2_9VIBR Length = 185 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 96/184 (52%), Positives = 136/184 (73%), Gaps = 2/184 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + GK ++++R+++GLSQR AE +G+THSAIS+IE KVSP++S+LQK++ V+ LSL Sbjct: 2 DNHQIGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSL 61 Query: 64 SEFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121 SEFF+ E ++ E +VV+ +DLIE+GS+ VSMKLV+NG+ + + + E Y P +TTG Sbjct: 62 SEFFTLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGA 121 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 IKH+GEE+GTVL GE+ L NG+ Y + AG+SY I+T IPH F+N S CR+ISAHT Sbjct: 122 SNIKHEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHT 181 Query: 182 PTTF 185 P F Sbjct: 182 PKAF 185 >UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium RepID=B5ZXQ7_RHILW Length = 189 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 4/183 (2%) Query: 1 MSDE-GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59 M ++ A G R+ ++R +GL+ A SG++ + IS IE+ + SP S L ++ Sbjct: 1 MEEQLEQAIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAAL 60 Query: 60 GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 GLSLS FF+E + P + + G + V + ++ + G Sbjct: 61 GLSLSAFFAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGAR 120 Query: 120 TGERIK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 H + + +GE+ +T Y L G + G H F N R Sbjct: 121 VSFPPHAASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARY 180 Query: 177 ISA 179 Sbjct: 181 CVV 183 >UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=B3QIN2_RHOPT Length = 207 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 2/181 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D G L +R +QG S R A+ SG++ + + IE K P I TL K+ G+ Sbjct: 21 DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + + + L+ + + + + R + P Sbjct: 81 FARLIATETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHREDA 140 Query: 123 RIKHQG-EEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 G E V +G + +T + L AG + + +PHS+ N A + Sbjct: 141 DPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLVM 200 Query: 181 T 181 T Sbjct: 201 T 201 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK+L R +GL+ + LSG++ + IS IE+ P++ L KL G+S+ F Sbjct: 6 IGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFV 65 Query: 68 SEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125 E EK Q + + + + G + + ++ +T + +G+ Sbjct: 66 EEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGDAPMV 125 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H GEE VL+G + I + Y L +G S + +PH + N G ++ +P Sbjct: 126 HTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVVSPA 183 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ L G+RL +IR+ LS +E SG++ +S +E+ P++ T++++ + G Sbjct: 1 MNSNHL-IGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALG 59 Query: 61 LSLSEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 + P++ + V Q + + G++ LV + + + ++ +P Sbjct: 60 VPPFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFD-AMQLMTVVMEP 118 Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G+ +G +H+G ++G +L G + L ++G+ + L AG +A ++ +PH F N Sbjct: 119 GSKSGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAE 178 Query: 176 IISAHT 181 ++ +T Sbjct: 179 VLWINT 184 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%) Query: 1 MSDEGLA---PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M D G G RL +R+ GLS + + + L+ ++S IE+D SP++ TL KL Sbjct: 15 MKDHGRNDSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLAT 74 Query: 58 VYGLSLSEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 + + LS FF++P ++ D + + +++ +QG+ L+ + L ++ Sbjct: 75 SFDVPLSYFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALD-GLQLMMVRMT 133 Query: 116 PGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 P +++G E H+G + G VL G + L + G+ Y L G S+ + PH F Sbjct: 134 PESSSGPEAYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPA 193 Query: 175 RIISAHT 181 ++ +T Sbjct: 194 EVLWINT 200 >UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=Q1GM81_SILST Length = 190 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G RL +R++ LSQR A+ +G+ +S IS IE K++P++ L+++L +SLS Sbjct: 10 DEDLGPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPISLS 69 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-R 123 +FF+ E E +DL E+G VS+K V R + +++ETY+ G TG Sbjct: 70 DFFAF-EPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTGRVM 128 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 H+GEE G VL G I +T+ Q L G +Y ++ PH F C ++SA TP Sbjct: 129 YGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSACTPP 188 Query: 184 TF 185 TF Sbjct: 189 TF 190 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L K L IR+++ LS + ++L+G++ + I IE+ + SP ++T+ K+ Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S + + P+ PD ++ N ++ S + +R + + Sbjct: 80 VSFTSLINNPQ-PDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKL 138 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +G EE TV EGE+ + IN Y L +G + PH++ N + R+ Sbjct: 139 SSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRLSMT 198 Query: 180 HT 181 Sbjct: 199 IY 200 >UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34 Tax=Burkholderia RepID=Q39C45_BURS3 Length = 286 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + G+R+ +R++ + A + L+ +S +E+ ++S+L + K Sbjct: 26 MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + LS +P + +P + + ++ + + + + G + Sbjct: 86 VPLSALIDQP-RQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMMEGYRS 144 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + H G+E VL G I T+ +DY L G S + H +N G +I+ Sbjct: 145 -EWVAHGGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203 Query: 181 TPTTF 185 T F Sbjct: 204 TLPLF 208 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 2/179 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + GKRL +R++Q +S R AE SGL + +S IE + SP++STLQ+L + +S Sbjct: 19 HVDVGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPIS 78 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123 FF+ PE P + V I ++ + G NRTL + T PG +G E Sbjct: 79 AFFT-PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEA 137 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 I H G+E + G+I+ T+ Q Y + G S +PH + N + + + P Sbjct: 138 IIHTGQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCP 196 >UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ Length = 201 Score = 168 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G RL R GL+ + A+ S + S IS IE + SP+++ L ++ +++ Sbjct: 26 LGVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALT 85 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 +E + P + + +I+ G +S++ + L PG + I+H Sbjct: 86 TEEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHV 143 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE+G VLEG + L + + + + AG ++ ++ PH + N RI +TP TF Sbjct: 144 GEEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 4/181 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D A G R+ E+R +GL+ ++ A + ++ S +S++E+ + +P + L ++ G Sbjct: 1 MVDLA-ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLG 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +SL+E +EPE V D G ++ P I T PG Sbjct: 60 VSLAELVAEPE-DRRVIVRRAADQDTVDEPGGWHRSILTPVVPGVNFEWIRTTLPPGCDA 118 Query: 121 GERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G + E V G + LT+ Q L G S H + N C Sbjct: 119 GRFPAYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYV 178 Query: 179 A 179 A Sbjct: 179 A 179 >UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT Length = 248 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D G+ L +R +GLS R A+LSG++ + + IE + +P I+ L K+ + + Sbjct: 62 EDLMPVVGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDV 121 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S F + P + ++ + S + + + R + + Sbjct: 122 PFSAFVAAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQ 181 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 G E TV G + + + + L G + I H++ N Sbjct: 182 SHPHPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVM 241 Query: 181 T 181 T Sbjct: 242 T 242 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 166 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 5/182 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++ + G+R+ +R ++ LS A +G++ A+S IE+ S + + L + Sbjct: 16 NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75 Query: 62 SLSEFFSEPEKPDEPQ--VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 S + +P V N + + ++G+S L+ P L + +PG Sbjct: 76 EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGG 133 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 T E H G E G V GE+ L ++ Y L G S+A + +PHSF N C I+ Sbjct: 134 T-ETYAHTGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWV 192 Query: 180 HT 181 +T Sbjct: 193 NT 194 >UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEN9_9FIRM Length = 188 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 3/182 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + R++Q +S + A ++ S +S IE +K P+++TL+++ G+++S+ Sbjct: 3 QLGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKL 62 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125 E E + + G+ ++ + +P + + P +G+ Sbjct: 63 LGEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPYT 122 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYA-INTGIPHSFSNTS-AGICRIISAHTPT 183 H G+EI VLEG I L ++ + + G SY I+ H F N S R++ P Sbjct: 123 HAGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNPP 182 Query: 184 TF 185 F Sbjct: 183 YF 184 >UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY07_9RHOB Length = 213 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 5/182 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+R+ ++R+ +GL+ + A+ SGL S IS IE+ ++P L + G+ ++ Sbjct: 22 ELGQRIRQLREARGLTLQTIADRSGLAISTISKIERGLMAPTYDRFSGLARGLGVDVTHL 81 Query: 67 FSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGE 122 FS + + + ++ + +++ + + + T +P + Sbjct: 82 FSPGGRRFEAGTVALARAGEFGFLETENYAYEMLFPDVRGKAMIPMCGTLKPLQKMSFER 141 Query: 123 RIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H GEE V+ G +V+ + G ++ L G S ++G H ++ RI+ T Sbjct: 142 MVNHPGEEFLMVMSGRVVVQLEGREEIVLDTGDSLYFDSGRGHLYAAEGDEGARILVVCT 201 Query: 182 PT 183 Sbjct: 202 AP 203 >UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS09_RUBXD Length = 292 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 5/178 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G+RL +R + + + +E +GL+ S IS +E+ ++++L++L + YG+++ E F Sbjct: 119 GERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELFG 178 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 + + P V ++ ++E GV + + G + + + G + H G Sbjct: 179 TDLEQNSPLVRAHERPVMEW-DNGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHDG 235 Query: 129 EEIGTVLEGEIVLTINGQ-DYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 EE V+ G + + + Q Y + G + ++ PH + + +TP TF Sbjct: 236 EEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWWA-GDEPVEAVYVNTPPTF 292 >UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJV6_DESAH Length = 190 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 72/187 (38%), Gaps = 10/187 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ ++ + R + L+ + A+ +GLT +S +E+ + +P STL K+ Sbjct: 1 MDEKIISV--NIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALE 58 Query: 61 LSLSEFFSE--PEKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETY 114 + ++ S+ + P + + + G +L+ P + + Sbjct: 59 VEITTLLSQGIDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIHA 118 Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 H+GEE V++G++ YHL G + ++ IPH + Sbjct: 119 P--FEAQRTYSHEGEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEKS 176 Query: 175 RIISAHT 181 +++ Sbjct: 177 KLLVVIY 183 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 9/186 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G+++ +RQ+Q L+ + A+++GL+ +S IE D+V+P I+TL K+ K + + Sbjct: 11 EMKLGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIH 70 Query: 65 EFFSEPEKPDEPQVVINQ--------DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116 FF E + + + E G K + G + + ++ Sbjct: 71 YFFEEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQ 130 Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 H+G E +L+GE+ + L AG S + PH + + R Sbjct: 131 RAWDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRAR 190 Query: 176 IISAHT 181 ++ Sbjct: 191 AVAVLY 196 >UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HHC8_PEPMA Length = 179 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 1/180 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +R + GL+Q AE S LT IS +E+D SP++ +L LL G ++ Sbjct: 1 MEIGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMAT 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF + E + E S ++ + + T+ + T T E Sbjct: 61 FFMDKPSVKE-IFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYNP 119 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +GEE G VLEG + ++ + Y L G + N IC++I +P F Sbjct: 120 FEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPPNF 179 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 4/182 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + K +++ R++ LS + A +G++ + +S IE+ + +P I+TL K+ Sbjct: 1 MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +SLS+ S ++ I++ D+I + + VS+ + N+ M QPG Sbjct: 61 ISLSQLTS---TSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKM 117 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H G EE V +G + + ++G+ Y + Q++ N+ +PHS+ N I + S Sbjct: 118 HSDPHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTST 177 Query: 180 HT 181 Sbjct: 178 MY 179 >UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas aeruginosa group RepID=A4XQJ4_PSEMY Length = 188 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 2/179 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+RL R+ G + + A +GLT S +S E++ ++S+L + K + L+ Sbjct: 5 RIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVL 64 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F +P +P +N+ +G Q ++ + + + P ++ + G + E I H Sbjct: 65 FDQPAQPQPD-SHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVGYQS-ELIAH 122 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +G E VL G IV TI G+DY L G S + G H +N++ +++ T F Sbjct: 123 EGVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 165 bits (419), Expect = 6e-40, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 5/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + A G R+ +R ++ L + A +GL+ + +S IE+ ++ P + TL ++ V+G+ L Sbjct: 11 QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 70 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM-----KLVHNGNPNRTLAMIFETYQPGT 118 FF+ ++ +V + L G + + +R + + + + Sbjct: 71 DHFFNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDS 130 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E +H E VL G +++ +NG++ L G + ++ +PHS+ + I I Sbjct: 131 PPSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAIV 190 Query: 179 AHT 181 + Sbjct: 191 VTS 193 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 5/188 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + G + + R ++GL+ + + ++ S +S IE + SP++ T+ +L + G++ Sbjct: 23 NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPG 117 LS FS + P + ++ +E+ +G + L+ P + T + Sbjct: 83 LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNK 142 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + T +H G E +LEG++ Y L G + + IPH R + Sbjct: 143 SETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPHGPEQLIDVPIRFL 202 Query: 178 SAHTPTTF 185 + F Sbjct: 203 AIINYNVF 210 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 2/179 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + L G+ + +R+ + L+ AA +G++ S ++ IE+ V+P IS L K+ Y +S Sbjct: 4 NINLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS 63 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + E D + I V + + +PG Sbjct: 64 FTSLV-ETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCLKA 122 Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 R G EE T+ G+ V+ GQ++ L G S H + N G + Sbjct: 123 RPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMVI 181 >UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH Length = 230 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 3/187 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + +RL +R + G S AA +G++ + + IE+ + SP ++TL K+ + Sbjct: 42 MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101 Query: 61 LSLSEFFSE-PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 +S S F P + E + +G+ + + + T PG Sbjct: 102 VSFSSFIEPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGYQ 161 Query: 120 TGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII- 177 G E V+ G + + + G+ L G++ PH + N Sbjct: 162 RESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPAIFHN 221 Query: 178 SAHTPTT 184 H P + Sbjct: 222 LIHYPVS 228 >UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3 Tax=Burkholderia RepID=Q13H28_BURXL Length = 204 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G RL +R QGLS A +G++ +S +E++K +P++ L++L + + L+ Sbjct: 18 DVGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTAL 77 Query: 67 FSEPEKPDEPQV-----VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 E + +P + L E+G G+ +L+ + + L M+ G+ + Sbjct: 78 LEEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSP-HGDHDLQMMIIMLPAGSGSE 136 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E + GE+ G VLEG +VL + + L AG S+ + +PHS N S R++ Sbjct: 137 EVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMN 196 Query: 182 --PTT 184 P Sbjct: 197 TQPPV 201 >UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales RepID=A8I9H1_AZOC5 Length = 216 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 2/176 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G L ++RQ++G++ R A S LT +S +E+ +P+I+ L ++ G+++++ Sbjct: 27 RLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQL 86 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET--YQPGTTTGERI 124 F P + D + + + + + T ++PG R Sbjct: 87 FDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRW 146 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEE V+ G + + + +D L G S I H + +++ Sbjct: 147 AHGGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 164 bits (417), Expect = 9e-40, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + LA G R+ + RQ +G + + AE +G++ I +EQ +P++ TL ++ G+ Sbjct: 12 TTLSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGV 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L P + + QG LV + + T PG G Sbjct: 72 GLPALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHG 131 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179 G E+ VL G + + ++G L AG S + HS++N R ++ Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAV 191 Query: 180 HTP 182 P Sbjct: 192 FGP 194 >UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LFU9_RALME Length = 212 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 4/179 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + +RL+E+R+ GL+ A+ + LT S +S +E+ SP I T+ KL G+++ + Sbjct: 29 SIAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQL 88 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + + +E + D + S G + + + P++ + + Sbjct: 89 ITRSSRANEILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMVPPFTLEEDQP 148 Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H GEE+ V+ GE+ + + + + AG S N IPH + + + + Sbjct: 149 MASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVVS 207 >UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria RepID=B5EKJ2_ACIF5 Length = 181 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 3/174 (1%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 K++ ++R+ +G S R A + ++ SA+S IE + SP+I+TL+K+ + ++ F + Sbjct: 6 KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65 Query: 70 PEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KH 126 E P + S++ + G P + + + +PG GE Sbjct: 66 GETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTSA 125 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 +GEE V+ G +G L G + + +PH++ N ++ Sbjct: 126 EGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179 >UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X7_HALOH Length = 182 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 3/183 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M++ GK+L ++R +G S E++G++ S + IE+ K +P + TL K+ + Sbjct: 1 MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S FF E E +++ L+ + + N + + +PG + Sbjct: 61 VPFS-FFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSY 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-IIS 178 QG EE V EG + LT+N ++Y + H + N S + + Sbjct: 120 KSEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKAYVL 179 Query: 179 AHT 181 Sbjct: 180 VCY 182 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 4/188 (2%) Query: 1 MSDEGLAPG--KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M ++ L G K++ R + L+ + +E G+T S +S IE+D V+P+I+TL+ + K Sbjct: 1 MKNDILDLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKA 60 Query: 59 YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 + L FF E E +E V N I + + + ++ + Sbjct: 61 LDVPLFMFFKE-ENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYS 119 Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 T E H GEE+ +L+G++ + I ++Y L G S I H + N ++I Sbjct: 120 FTEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVI 179 Query: 178 SAHTPTTF 185 A P +F Sbjct: 180 FAINPPSF 187 >UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae RepID=B9JGR0_AGRRK Length = 272 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 3/179 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G++L +R G + + A G+T S +ST+E+ + TL L YG ++S Sbjct: 96 IGRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLS 155 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 E + + + + GV+++L+ + PG T+ +H Sbjct: 156 GEEREDVPVLIRSGEWRAWPETTPGVTVQLLA--EGRTMMDCHRFVLAPGATSEGAYRHD 213 Query: 128 GEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 GEE +L G + L ++ Q + L+ G S + HS+ N G ++ +TP TF Sbjct: 214 GEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPTF 272 >UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA Length = 207 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 1/172 (0%) Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69 + L IR +G S + A G++ + +S IEQ K P IS L K+ + SE E Sbjct: 29 ENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKE 88 Query: 70 PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG- 128 + + ++ S+ + + + NR +PG G Sbjct: 89 KNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGT 148 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E V+ G++ L + + L S + H +SN + + Sbjct: 149 TENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200 >UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IAI3_9BACI Length = 188 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 4/179 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GK+++ IR+++G+S + + LS ++ S +S IE+ +P I+ ++ + +LS Sbjct: 1 MEFGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSA 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 E + + + + S G L+ P+R + + P + +G Sbjct: 61 LLDSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPA 120 Query: 126 HQG--EEIGTVLEGEIVLTINGQDY--HLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+ +E V +G + + ++ Y L G S+ H F N + C Sbjct: 121 HKSGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179 >UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMT2_AGRRK Length = 200 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 5/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + GKR+ +R ++ + + SG++ SAIS IE +++SP + KL + G+ + Sbjct: 10 DEMDLGKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDI 69 Query: 64 SEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119 SE FS+P + P + + + ++ +++ + + + T + Sbjct: 70 SELFSDPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRD 129 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ I H GEEI VL G + L + L G ++ + H+ G + Sbjct: 130 FGKLIAHVGEEIVVVLSGRVELRTEFYEPLVLEEGDCAYFDSTMGHACLAAGDGDAELFW 189 Query: 179 AHT 181 + Sbjct: 190 VCS 192 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 A G R+ +R+ +G + A +GL+ S +S +E+ + + + L ++ G +++ Sbjct: 20 RAIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIAR 79 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--R 123 E E P V+ + +I G G + ++V P M+ T PG GE Sbjct: 80 LV-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGP 138 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + E VLEGE+ LT++G ++ L AG + + H + N A CR + A Sbjct: 139 HQADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAM 195 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 10/187 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + G RL ++R+++G++ A +GLT +S IE K+ P I+TL ++ + G Sbjct: 1 MEEL---IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIG 57 Query: 61 LSLSEFFSEPE-----KPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFET 113 ++ FF + V ++ G G + + + ++ + T Sbjct: 58 CDMAYFFQSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFT 117 Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 + +HQGEE+ VL G +V I G++ L AG S ++ +PH + A Sbjct: 118 FPAELQGDTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQA 177 Query: 174 CRIISAH 180 ++ H Sbjct: 178 QALVIIH 184 >UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales RepID=Q1LDV8_RALME Length = 203 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 75/187 (40%), Gaps = 5/187 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++ A G L +RQ Q LS + +G++ S +S IE++ +P ++ L +L G+ Sbjct: 15 AEGPPAVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGV 74 Query: 62 SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 SL++F ++ P+ P V + ++ ++++ + + QPG Sbjct: 75 SLTDFLAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPG 134 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G +E +VL G + + G + L G + + H+ N + Sbjct: 135 GVLASEPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATA 194 Query: 177 ISAHTPT 183 + Sbjct: 195 LLVVVHP 201 >UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia RepID=B9R695_9RHOB Length = 183 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 5/185 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D+ +RL +R+ +GLS AE SG++ + +S IE+ SP + L +L +G Sbjct: 1 MNDQD--LAQRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--T 118 +S+++ F + ++ N+ + G + V ++I T G Sbjct: 59 VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-I 177 + E +L G + + + + L G P+++ T + R + Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178 Query: 178 SAHTP 182 + TP Sbjct: 179 TVITP 183 >UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4Z4_CLOK5 Length = 179 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ E+R ++GL+ + +E +GL+ +S E+ + A+ L + V + ++ Sbjct: 1 MNIGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINY 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GER 123 FF + EK ++ + D K + ++ L+ P + Sbjct: 61 FFDDEEKE---LIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYPDI 117 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 HQGEE VLEG + L I+ + L G S + H++ N + + + I+ H P+ Sbjct: 118 YAHQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITVHYPS 177 Query: 184 T 184 + Sbjct: 178 S 178 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 R+ +R+ +G + + A LSG++ S +S IE+ +P + ++ + +G++L + P Sbjct: 21 RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80 Query: 71 EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E P VI DD + ++ + + + + T + G + +G Sbjct: 81 EPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGKLESQPHFEG 140 Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E TV +G + LT + L G S +PH N G + Sbjct: 141 TREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFLV 192 >UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGH2_9BACT Length = 196 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + G+R+ +IR ++GL+ + A +G + + IS IE + V P I+TL K+ KV Sbjct: 1 MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPG 117 + ++ FF E + VV G + + L ++ T +P Sbjct: 61 VKMTYFFEEEINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKPD 120 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + H+G E V+EG + + + L AG S A N+ IPH+ ++ Sbjct: 121 KRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALVL 180 Query: 178 SAH 180 AH Sbjct: 181 CAH 183 >UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWR1_9CLOT Length = 204 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 16/197 (8%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G ++ +R Q+ ++ + +E + L+ +S +E+ S A +L+K+ V + L+ Sbjct: 2 NKNIGAKIKRLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLEKIADVLEVDLT 61 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FF +P++ + + + ++ E+ + + ++ + PGT + Sbjct: 62 YFFMKPKEHKKTVIRSYEKEVFEITDGKYINYHLSSNLTDKIMFPKLIEILPGTAESDGF 121 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAIN---------------TGIPHSFSNT 169 + GEE VLEG + L + + L G S + HS N Sbjct: 122 NYSGEEFIYVLEGILTLNMAESEVDLYPGDSIHYSYKNKVMLKNGEDSKIVNQNHSLLNK 181 Query: 170 SAGICRIISAHTP-TTF 185 + + ++I P F Sbjct: 182 TNKVTKVIIVSVPNPYF 198 >UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2 Length = 184 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 3/186 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ + G+++ R+ GL+ +R AEL+ +T S +S IE+ +P++ TL+ + Sbjct: 1 MN--NINVGQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALN 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTT 119 + L FF E +E V NQ I G VS +L+ + + Sbjct: 59 IPLFNFFLEDTSTEELVVRANQRKKITFPESGNVSYELLSPNLDGSLELALMNLLPQTAS 118 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + E + H+GEEI ++EG++ L +N + L G S I H + NTS +I Sbjct: 119 SMEPVAHKGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFG 178 Query: 180 HTPTTF 185 TP +F Sbjct: 179 VTPPSF 184 >UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2 Tax=Cronobacter RepID=C9Y503_CROTZ Length = 204 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 11/183 (6%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D + L +RQQ+ S +AA+ +G++ + + IE+++ SP ++TL K+ + + Sbjct: 30 DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 S F + P + Q + ++ + + M+ T PG + Sbjct: 90 FSVFITPPAPG---------ARTVFDAQQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDS 140 Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAH 180 G E V+EGE+ L +G L G+ PH++ N + R H Sbjct: 141 TPHENGVTEHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRFHSLIH 200 Query: 181 TPT 183 P Sbjct: 201 YPA 203 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D G+R+ +R+++GL+ A SG++ + IS +E+ + P + +L + G+ Sbjct: 11 EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 SLSE E E+ V + + G +L+ G R + I G+T+G Sbjct: 71 SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130 Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E H+ EE V G ++ + G ++ L G + +PH F N G C Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190 Query: 180 H 180 Sbjct: 191 I 191 >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 10/184 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L ++RQQ+G S R AE +G++ + + IE+++ SP ++TL K+ Sbjct: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S F S P+ + Q + + + +P G + Sbjct: 61 VPFSTFISPPQSATPSV--------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178 +G E V++G++ L ++G+ L G+ + H + N Sbjct: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 Query: 179 AHTP 182 H P Sbjct: 173 IHYP 176 >UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLI4_HAHCH Length = 192 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 6/186 (3%) Query: 1 MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M D L GKR+ ++R+ + L+ + A+ S ++ S +S IE+ + +P +TL L + Sbjct: 1 MKDTDLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRA 60 Query: 59 YGLSLSEFFSEPE---KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 G+ SE E E ++ Q I+ G + ++ + ++ + Sbjct: 61 MGIEWSELVDESEGVSHSPIEHIIAAQTPKIDNPQGGYHLSILSPPHLVGSIEWYELRMR 120 Query: 116 PGTTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 P + QG E TVL G++ + Q L G + + + H+ N Sbjct: 121 PQGKLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDT 180 Query: 175 RIISAH 180 + Sbjct: 181 IALLVV 186 >UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAK2_OLICO Length = 202 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G+R+ RQQ+G+S + A +GLT S +S +E+ P+I+T K+ +V+G ++ + Sbjct: 22 SLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQL 81 Query: 67 FSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 E +V + L G +++ + + P++ + + R Sbjct: 82 LGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GEE+ VL G+I + + L AG + N+ PH + + Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVVV 198 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 1/175 (0%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ +R+Q L+ A +G++ +S IE+ + P+I++L + + G+++ F Sbjct: 1 MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127 P + ++ V + L + G E H Sbjct: 61 GAP-GDAPTACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHT 119 Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 GEE V+ GEI LT++ + L AG++ + + H++SN + I+ P Sbjct: 120 GEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWVGAP 174 >UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UR68_RHOBA Length = 233 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 3/175 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + +RL ++R +G++ A+ SG T S +S +E +++P++ L L G+S S Sbjct: 53 VELAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSS 112 Query: 66 FFSEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + + V + + + + + +RT+ G E Sbjct: 113 LLEGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGEER-EP 171 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H+GEE TVL+G + Q++ L G S ++ + H +N A +I Sbjct: 172 RTHEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVIC 226 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 8/182 (4%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G ++ E+RQ+ L+ + A +GL+ +S IE +KV P ++TL +L + ++L F Sbjct: 17 NIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHF 76 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQ-------GVSMKLVHNGNPNRTLAMIFETYQPGTT 119 F E + D + ++ + + N+++ + Sbjct: 77 FQESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFPTQEK 136 Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H+GEE V+EG++ + L G S I + + HSF R ++ Sbjct: 137 EEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALA 196 Query: 179 AH 180 Sbjct: 197 VV 198 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D A G+ ++RQ QG+S R +E SG++ IS IE+D +P++ L + + + Sbjct: 10 EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69 Query: 62 SLSEFFSEP-------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114 + F + + +P + + + +L+ +G N L ++ T Sbjct: 70 PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSG-GNHNLQIMILTI 128 Query: 115 QPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 +PG T+G + + E+ G VLEGE++L+++ ++ HL G S+ ++ PH+F N Sbjct: 129 EPGGTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRP 188 Query: 174 CRIISAHTPTTF 185 RI+ F Sbjct: 189 ARILWVIGAVQF 200 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 3/184 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + L +R+++ LS A+LSG++ S + IE+ +V+P +ST+ K+ Sbjct: 1 MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S S+ + E E + N L+E V + + + R + +Q Sbjct: 61 VSFSQLVNHTETNVEIVDIKNLKPLLEDE-GRVRIYPTFSFDSTRRFEIYSLEFQTNGYL 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178 QG +E TV GE+ +T+ + + + G++ PHS+ NT C + + Sbjct: 120 STEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANCLLDMV 179 Query: 179 AHTP 182 P Sbjct: 180 IFYP 183 >UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B0MBC4_9FIRM Length = 180 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 2/180 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L K + +R++Q LS ++LSG++ S ++ IE+ +P ISTL K+ + Sbjct: 2 NLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPFD 61 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 P+ P E + + L+E + + + + +R A+ + +P + Sbjct: 62 ALTVRPKTPYEIIKTADIEPLLEDSGRVKNY-PLFPDDADRKFAVYYLKLEPYSRWESEA 120 Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 +G E TV G++ + + + L +S HS+ NT + Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVLYMILFYP 180 >UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB Length = 229 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 3/182 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + L G RL R+ Q ++ ++ + ++ S +S IE DK P++ +L + G+ + Sbjct: 24 DQLRIGPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDI 83 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121 + F + E PDE + + + + V +++ + + + L P + G Sbjct: 84 TTFLTL-EIPDEFLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGG 142 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + H+GEE+ V++GE+ +T+N + G S + H++ N S +I +T Sbjct: 143 PSMSHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINT 202 Query: 182 PT 183 P Sbjct: 203 PP 204 >UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=Q3SUW3_NITWN Length = 259 Score = 161 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 2/181 (1%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + + GK L IR +QGLS R A+ SG++ + + IE K +P I L K+ + Sbjct: 73 ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTG 121 + + + + + L+ + + + + R P Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192 Query: 122 ERIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E E V +G + + + + L G + +PH++ N + Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252 Query: 181 T 181 T Sbjct: 253 T 253 >UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium RepID=Q8RFX4_FUSNN Length = 199 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 4/187 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ E + G + IR+ + L + A G++ S +S IE+ +P+++T++ + +V Sbjct: 15 MNKE-INVGITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLE 73 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGT 118 + L +FF + EK ++ +DD + ++ V+ +L+ + + T + Sbjct: 74 VPLFKFFMDLEKEKYEFHLLKKDDRKIISTEYVTYELLSPDVETN-IECMQMTLIGKNAE 132 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 T+ + + H+GEEI +L G++ LTI L +G S I + +PH ++N +I Sbjct: 133 TSVKPMAHKGEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIF 192 Query: 179 AHTPTTF 185 + +P F Sbjct: 193 SVSPPEF 199 >UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO Length = 190 Score = 161 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 5/188 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + DE G L +R+ +GL+ AE G + +S +E+DK P+IS L+ + KV Sbjct: 5 LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64 Query: 61 LSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 +S+S F V + ++G+ +L+ + M+ T++PG Sbjct: 65 VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELLSPDLTD-DFEMVHSTFEPG 123 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + E + +E+ +L G + + IN + + G S+ I +SN A I Sbjct: 124 SRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIRGE-AFRWSNPYAEPAVAI 182 Query: 178 SAHTPTTF 185 P + Sbjct: 183 WVIAPPVY 190 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 1/172 (0%) Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70 RL +R+Q+G + AE +GLT S +S +E+ P+I+ KL K + + + FSE Sbjct: 43 RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102 Query: 71 -EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129 ++ Q + + + + + G + L + +H+GE Sbjct: 103 RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFREHEGE 162 Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E+ V +G + + + L G S N IPH + ++ + Sbjct: 163 EMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVVS 214 >UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria RepID=B1M0W6_METRJ Length = 186 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G RL +R + GLSQR A+ +G+T+SAIS IE ++V+P++ L+++L + ++ Sbjct: 2 SIDVGARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMA 61 Query: 65 EFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 EFF+ +P+ ++ +S + V + R L ++ E Y+PG TG Sbjct: 62 EFFALEPEPERKAFFAAEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADTG 121 Query: 122 ERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+GEE G VL G + +T++ + L G +Y+ ++ PH F C ++SA Sbjct: 122 RVPLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSAC 181 Query: 181 TPTTF 185 TP +F Sbjct: 182 TPPSF 186 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 8/186 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M G+RL R+Q+GLS AE +GL+ +S +E+D VSP+I +L + G Sbjct: 1 MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 L++++ F+ P VV D +GV L+ + R + G+ Sbjct: 61 LAVADVFAVA-----PVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGS 115 Query: 119 TTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 E + E+ V+ G I L + Y L AG S H++ N G R++ Sbjct: 116 GGDELYHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVL 175 Query: 178 SAHTPT 183 P Sbjct: 176 WVLAPA 181 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + +RL ++R+ +G S AE +G++ + + IE+ + SP ++TL KL + Sbjct: 1 MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +SLS ++ ++P + + + ++ + +P + G + Sbjct: 61 VSLSWLLNDEQQPMT----------FDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQS 110 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +G E+ V G + + + + AG++Y + PHS+ N +G ++ Sbjct: 111 HSDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAV 170 Query: 180 H 180 Sbjct: 171 I 171 >UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota RepID=Q468H3_METBF Length = 192 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 10/192 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS+E G ++ ++R+ + ++ AE S + I +E + P+++ L K+ + G Sbjct: 1 MSEEN-RVGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59 Query: 61 LSLSEFFSEPEKPDEPQVVIN--------QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE 112 + L F + + V + + + + +R + Sbjct: 60 VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119 Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 P ++ H+GEE +L GEI + + L AG S ++ IPH Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179 Query: 172 GICRIISAHTPT 183 +I++ Sbjct: 180 EDAKILAVVYAP 191 >UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14Q08_SPICI Length = 177 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 3/180 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +RQ+ L+ A LT IS +E+D SP+I TL+ +L+V G +L++ Sbjct: 1 MLLGEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLAD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF + + + V ++ ++ ++ + L I +P + + Sbjct: 61 FFKQEKN---RKFVYAAEEHYKVEQNNYRIEWLVPNAQVNELEPILIQIKPQGESERILP 117 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 +G+ G VL+G +++ + S+ + H N + I ++ TP F Sbjct: 118 FEGQIFGYVLKGTVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + + + R++QGLS A SG++ S IS IE+ + P+ L +L + G+ Sbjct: 16 TSPQIHIAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGV 75 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + S + + + + ++ ++ + G + + P R + + T PG +TG Sbjct: 76 TFSRLMAPATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTG 135 Query: 122 ERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E H E VL G + I + + G S H+F+N C Sbjct: 136 EFTAHRRGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLV 195 Query: 180 HTP 182 P Sbjct: 196 IDP 198 >UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YW73_BRASO Length = 184 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 4/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G RL R +G+ R A++ G S IS IE KV P++ L K++ ++ Sbjct: 1 MNIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMAS 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 FF + + + G +GV + + L PG Sbjct: 61 FFGLRVDDYKQVQKPEDRMKVYVDALRGGKGVVYERLVPVAAGNLLEANIHVVAPGGEKI 120 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + I HQGE +G ++ G I LTI+ Y + AG S+ + +S+ N RI+ +T Sbjct: 121 DLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWVNT 180 Query: 182 P 182 P Sbjct: 181 P 181 >UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026G4_SOLUE Length = 225 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 6/183 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G++L ++R ++ ++ +GL+ S +S +E K+ P ++TL ++ V+ + L F Sbjct: 41 DIGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHF 100 Query: 67 FSEPEKPDEPQVVINQD-----DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 F +V + + + + + ++ L + P Sbjct: 101 FGNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRAAD 160 Query: 122 -ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + H+G E+ VLEG + + G+D+ L G S ++ PHS+ + R I Sbjct: 161 VQEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIVVT 220 Query: 181 TPT 183 TP Sbjct: 221 TPP 223 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 2/174 (1%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 LA G+R+ + RQ ++ + + G++ S +S IE+D P + TL ++ +S+ Sbjct: 11 PLALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSID 70 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 F + P + D + + + + P L PG + E + Sbjct: 71 HFIATPRQAD-SVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYES-ETV 128 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +H GEE+ VL+GE++ +NGQ + L G S PHS+SN S R++ Sbjct: 129 QHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLLW 182 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ G+ L +RQ+ G+S +A++++G++ + + IE+ + SP +STL K+ + Sbjct: 1 MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 ++ + +E E + + + I + + ++ +P R + + T Sbjct: 61 INFTTLLNENTNTYE-VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTH 119 Query: 121 -GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 H EE V+EG++ L ++G+ Y L +G S + + H + N + G Sbjct: 120 VSSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIF 176 >UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae RepID=B8FLW0_DESAA Length = 184 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 5/180 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 ++ G+R+ ++R+ + + A +GL + IE + P++ +L ++ + + S Sbjct: 9 NISTGQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVD-S 67 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123 FF E E + + + + + G ++ + P Sbjct: 68 AFFLEKEVKTTKKGLAKA---YSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVS 124 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 +H+GEE VL G++ +T+ L G S N+G+ H N ++ Sbjct: 125 YQHEGEEFVYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 3/176 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 L R++ GL+ AE +GLT S +S +E+ +P+I+ K+ +V + + F Sbjct: 1 MAAFLRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLF 60 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVS--MKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 S+ + + +V +D +I+ + S + + + + + Sbjct: 61 SDSMEGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPFVVH-PASVMGPKFMD 119 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE V G + I GQ HL AG S + PH + SA ++ Sbjct: 120 HTGEEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVVY 175 >UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA Length = 180 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 6/171 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +R+Q+GL+ + A+ +GLT S +S IE+ + +P+I+ K+ + + + FS+ Sbjct: 5 LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GERIKHQG 128 + D +G Q ++ + +T++ G G +H G Sbjct: 65 AHETITADRAHDR---LGPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTG 121 Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +E V G + L Q L G S + + H ++ Sbjct: 122 QEFVFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172 >UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6V3_PAESJ Length = 182 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G + IR+++ ++ + E +GL+ +S +E +K SP+I+TL+ + + L+ Sbjct: 1 MDIGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAY 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 + K ++ Q+V I V + + + + M+ PG +TGE Sbjct: 61 LLLD--KKEKMQIVRKDGRRITTSGPDKLK--VSHLSSTKNVHMMIVELPPGASTGENHA 116 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+GEE+ V++G I + L AG S++ N PH+ N ++ + Sbjct: 117 HEGEEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVY 172 >UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X8B7_ENTFA Length = 183 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 65/180 (36%), Gaps = 1/180 (0%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + G L +IRQ++ L+ A ++G++ +S IE+ +P I+T+ K+ + Sbjct: 2 EINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVP 61 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 + + + P V + + ++ N R + G Sbjct: 62 YTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKYQA 121 Query: 123 RIKH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + E V++G + L + Q Y L + + H++ N + + + Sbjct: 122 VGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAVVINY 181 >UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Acinetobacter RepID=B2HYY3_ACIBC Length = 197 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 5/186 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + R+ E+R +G + A ++ SAIS IE+ + SP L+KL Sbjct: 1 MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE 60 Query: 61 LSLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 + L++ F+ +P + N+ G + V N ++ + P + Sbjct: 61 VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS 120 Query: 119 T---TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 ++ V+EG+I + + Y L G A+ P +SN SA + R Sbjct: 121 RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR 180 Query: 176 IISAHT 181 I + Sbjct: 181 YILVVS 186 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 12/190 (6%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +D+ G+ + IR+++ +S + A SG+ +S IE+D +P++ TL ++ + + Sbjct: 3 ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62 Query: 62 SLSEFFSEPEKPDEP----------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111 LS F ++ +++ G+ ++ +++ + L + Sbjct: 63 PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPP-AGQRLQFMV 121 Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 QPG T+G + E+ G VL+G L ++GQ L G S+ + PH F N Sbjct: 122 LNIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181 Query: 171 AGICRIISAH 180 I+ Sbjct: 182 DEPASILWII 191 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E G +L +RQ + + + E +GL+ + +S IE+ +V P ++TL ++ V+G+ L Sbjct: 27 EAYRIGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGL 86 Query: 64 SEFFSEPEKPDEPQVVINQDDL----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 FF E ++V +D L G + + + + Sbjct: 87 DHFFGPGEDAPVLEIVRQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEFSGNGS 146 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H G E+ V+EG + L I+G+ L G S + G HS+ CR + Sbjct: 147 ESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALVV 206 Query: 180 HT 181 + Sbjct: 207 VS 208 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 5/180 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G R+ +R+ LS R AE SG++ +S +E+ + SP + ++ L LS+ Sbjct: 11 AIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQL 70 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GER 123 E+ V + + G +++ P + + PGT T G+ Sbjct: 71 LRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDP 130 Query: 124 IKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+ E + G +VL +G Y L AG + + +PH F N +++ + Sbjct: 131 PVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVS 190 >UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci RepID=C1XM81_MEIRU Length = 186 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 4/182 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 + G RL R +GL+ + A+ SGL S IS +E++ + ++++L K+ + Sbjct: 7 SPSVPIGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQ 66 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 F + P V + G GV ++ G + + E G E Sbjct: 67 PGSLF---DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKE 123 Query: 123 RIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + ++ TVLEG + TI Y L G S + PH++ N ++ + Sbjct: 124 PYSFPSDTDVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVLS 183 Query: 182 PT 183 P Sbjct: 184 PA 185 >UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5R2_PAESJ Length = 187 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 4/179 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKR+ IR++Q +Q + G T S +S IE PA++TL K+ G+ +S+ Sbjct: 1 MELGKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSD 60 Query: 66 FFSEPEKPDEPQVVIN---QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 K + + + + +G S +G ++ + + G Sbjct: 61 LLEPSPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSH 120 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H+G+E VL G++ + +Y + AG N+ H S + ++ T Sbjct: 121 VFSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNSLEEHLVIPVSEQ-VKYLAIFT 178 >UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=C3MCD7_RHISN Length = 244 Score = 158 bits (400), Expect = 8e-38, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 6/187 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 +A G + R++ G++ A + ++ +S IE SP+++TLQ L + G+ + Sbjct: 53 LEVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPI 112 Query: 64 SEFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGNPNRT---LAMIFETYQPG 117 + FF E+ V + + G L+ + N + T Sbjct: 113 TSFFRGFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + +H G E +LEGE+V Y + G S + PH + R + Sbjct: 173 SDVFPTFQHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRYL 232 Query: 178 SAHTPTT 184 S + + Sbjct: 233 SIISYPS 239 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 4/166 (2%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 ++ + A S L+ + +S IE+ K +P+ +TL +L + + FF +P P V Sbjct: 1 MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60 Query: 81 NQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKHQGEEIGTVLE 136 + S G ++ + N + + PG T H GEE G V+ Sbjct: 61 GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120 Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 G+I + ++G+ + L AG S + PH + N C I TP Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTP 166 >UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UEQ1_SINMW Length = 209 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 5/181 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + + L ++RQ+ GL+ A L S +S IE ++SP T+ L + G ++E Sbjct: 18 RSIAETLRQLRQENGLTLNELARRCALAPSTLSKIENGQMSPTYDTILSLAEGLGADVAE 77 Query: 66 FFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTTG 121 F+ + + + D + + +++ ++ + + + G Sbjct: 78 LFARRQTTTVSGRRTINRAGDGVAHNTDQYDYQMLCTELAHKQFVPLKAIIKANSISRFG 137 Query: 122 ERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + H GEE VL GEI L L G S ++ + H+ S ++ Sbjct: 138 GMLSHSGEEFVYVLSGEIELHTQFYAPTRLHTGDSCYFDSTMGHALLKASEEDAEVLWVC 197 Query: 181 T 181 + Sbjct: 198 S 198 >UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseudomonas RepID=Q880R5_PSESM Length = 212 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 1/178 (0%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + L +R ++ LS A L+G++ + ++ IE + P+I L K+ K +S++ F Sbjct: 31 RVARNLQRLRSKRYLSMDALARLTGVSRAMLAQIESGRSVPSIKVLCKIAKGLKVSIAAF 90 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 + + + S + + + R Sbjct: 91 LEDRAFEGVELLPAQHSKRLVSASGVFVSRALFPFDMARQSEFYEIRLGALGEEISNGHG 150 Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 G +E V +G + +++N + Y L G S PH + N + T Sbjct: 151 PGVQENLVVAQGVLEVSVNEERYLLSTGDSILFYADQPHRYRNPADSEALAFLVMTYP 208 >UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEW8_9RHOB Length = 202 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 3/186 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 G L R+ QG++ R AE +GL+ IS E+D P++S+L+K+ +V G+ Sbjct: 10 QSTDSKIGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGV 69 Query: 62 SLSEFFSE--PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 SL + E P + S ++ + + P TL+ + PG Sbjct: 70 SLQDILPETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHR 129 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + E H GEEI VLEG + + ++G+ L G S ++ PH+ N + I I+ Sbjct: 130 S-ELQSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILHV 188 Query: 180 HTPTTF 185 T F Sbjct: 189 CTIDVF 194 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 3/179 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E G+++ +R ++ L + + L+ +S IE+ +V P + TL ++ V+G+ L Sbjct: 11 ESYRIGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGL 70 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 FF E + P V + + + + + +R + + P Sbjct: 71 EHFFEEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA 130 Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 E +H+G E+ V+ G + + I+ + L A S + PHS+ S + Sbjct: 131 SEPHEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189 >UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria RepID=A6UEP3_SINMW Length = 234 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 +A G + R++ G++ A + ++ +S IE SP+++TLQ L + G+ + Sbjct: 43 LEVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPI 102 Query: 64 SEFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGN---PNRTLAMIFETYQPG 117 + FF E+ V + + G L+ + + T Sbjct: 103 TAFFRRFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + +H G E +LEGE+V Y + G S + PH + R + Sbjct: 163 SDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRYL 222 Query: 178 SAHTPT 183 S + Sbjct: 223 SIISYP 228 >UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMW2_9PROT Length = 218 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 4/182 (2%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 G + + R + ++ A GL+ S +S +E+ ++ L ++ G ++ + Sbjct: 9 QRIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALGGTIHD 68 Query: 66 FFSEPE----KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 P+ + + + G V G R + + Sbjct: 69 LIGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSAAGSAD 128 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 R H GEEI VLEG + + + L G + + + IPH+ R++ Sbjct: 129 TRFAHPGEEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPARVLMMTH 188 Query: 182 PT 183 Sbjct: 189 HP 190 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 8/192 (4%) Query: 1 MSDEGLAPG-------KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQ 53 M+D G G +++ ++R +G S A SG++ + IE + +P+I TL Sbjct: 1 MTDTGGRVGAVTSAVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLC 60 Query: 54 KLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET 113 ++ +G+S++ E+ ++ ++ G G +L+ + + Sbjct: 61 RVADAFGVSIARLLEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWR 120 Query: 114 YQPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 +PG H EI VL+G +T++G D+ + AG++ + H + G Sbjct: 121 MEPGEALRSPDHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDG 180 Query: 173 ICRIISAHTPTT 184 R++ + Sbjct: 181 PVRLMMVVVTPS 192 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 1/181 (0%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + + R ++G + A +G++ + IEQ + +P++ T+ K+ G+S+ Sbjct: 18 LTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALGISI 77 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + + P V Q + G +L+ L M PG ++ Sbjct: 78 TTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESSPSD 137 Query: 124 IKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 G E+ V+ GE+ LT++G ++ + AG S + PH++ N A ++ A + Sbjct: 138 PHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEMVMAVSV 197 Query: 183 T 183 Sbjct: 198 P 198 >UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q12BT0_POLSJ Length = 207 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 3/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + +R+ ++R + LS A G++ S IS IE+ + SP L+KL + Sbjct: 14 ASLNDRIAQRVRDLRAARSLSLDALATHCGVSRSMISLIERGESSPTAVLLEKLATGLNV 73 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L+ F P+ +P + G + V + ++ ++ Sbjct: 74 PLASLFEAPQPTKDPVARLADQPSWRDPHSGYVRRNVSPSGVASPIQIVEVSFPAKARVA 133 Query: 122 -ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E + + VLEG I +T+ + L G A+ P S+ N + R Sbjct: 134 YETGAREAQIHQQVWVLEGSIEVTVGDDQHRLGTGDCLALVLDRPVSYHNPTRKTARYAV 193 Query: 179 AHT 181 T Sbjct: 194 VIT 196 >UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Burkholderia RepID=Q13RR3_BURXL Length = 276 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 12/189 (6%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+R+ RQ Q L+ A+ L G++ S +S +E +SP LQK++ + + E Sbjct: 79 DLGRRVRAARQAQDLTLETASRLCGVSRSTLSKVENGLMSPTFDVLQKIVLGLKIEIGEL 138 Query: 67 FSEPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTTGE 122 F K +++ +G M+L+ ++ + + Sbjct: 139 FGSTPKVSASGRRALTRKNEGQRHAYRGYQMELLATDLAHKAMLPFRIRISAHTLDAFDD 198 Query: 123 RIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-- 179 +H+GEE V+ G + L HL AG S ++ H+ +TS ++ Sbjct: 199 WGRHEGEEFLYVISGSVCLYSELYAPTHLNAGDSLYFDSRTGHAAVSTSEEDAEVLWMAT 258 Query: 180 -----HTPT 183 HTP Sbjct: 259 SADIPHTPP 267 >UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH7_9PLAN Length = 205 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 69/181 (38%), Gaps = 2/181 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + +R+ E+R+++G S + G++ S +S IE+ + +P ++ ++ + +G+ Sbjct: 21 DEISGQLSQRVRELRKERGWSLDSLSAACGVSRSMLSQIERGEANPTLAVTVRISQAFGI 80 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +L E P +V+ +D ++ + + + + Sbjct: 81 ALGELVEAPVSTSAIEVIRAEDRTFHYRSDDECRIRTLSPLHLEKDVEFYEVQLHANGKL 140 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +G E TV +G++ + L G S + +PH+ N G + Sbjct: 141 QSAPHFRGTREFLTVEKGKVQVNSGEDTTQLGPGDSASYRVDVPHAIMNIGRGEAVLFLV 200 Query: 180 H 180 Sbjct: 201 V 201 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 80/175 (45%), Gaps = 10/175 (5%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 ++ G+ + +IR+++ L+ ++ AEL+ L+ +S +E +K ++T++ + + S+ Sbjct: 1 MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF E + D++ Q + + + + +PG T E ++ Sbjct: 61 FFYE---------HASLMDVLNAKRQSFYYEQLA-YDKGSPFIPLKVKLKPGNTDLEYVQ 110 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H G E L+G + ++++ + L G+S + PH + N + + + + Sbjct: 111 HDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVIN 165 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 11/193 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSD G RL E+R +SQR+ AE SG+ H +S IE + SP++++L+K+L G Sbjct: 22 MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79 Query: 61 LSLSEFFSEPEKPDEPQVVINQD------DLIEMGSQGVSMKLVHNGNPNR--TLAMIFE 112 +++SEFF + L V + R L ++ E Sbjct: 80 VTMSEFFEPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHE 139 Query: 113 TYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 Y+PG TGE + H G E G V+ GEI LT+ Q L AG SY + PH F N S Sbjct: 140 RYEPGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVSD 199 Query: 172 GICRIISAHTPTT 184 ++SA TP Sbjct: 200 REAVVVSACTPPY 212 >UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae RepID=A9BI07_PETMO Length = 178 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 1/175 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+++ +R + ++Q A S LT IS +E+D SP + L+ +L+ G L + Sbjct: 1 MQIGEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FFS E ++ I GV +L+ + + + +PG +T Sbjct: 61 FFSNLENKEKIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIEKP 120 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISA 179 H+G E+G V+EGEI L +N + Y + +++ + H N S+ +I Sbjct: 121 HEGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSSTNSATLIWI 175 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 10/184 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L +R Q+G S R AE+SG++ + + IE+++ SP ++TL K+ Sbjct: 8 MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + S F S P+ P + Q + + + +P PGT + Sbjct: 68 VPFSMFISPPQAEFPP--------TFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVS 119 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178 G E V++G + + G + AG+ H++ N+S Sbjct: 120 ESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSL 179 Query: 179 AHTP 182 H P Sbjct: 180 IHYP 183 >UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N143_CLOK5 Length = 184 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 3/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D G L IR+++ L+ ++L+ ++ S + IE+ +P I+ L K+ Sbjct: 1 MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + ++ +E + P VV N D + G + + N +P + + + ++ + G++ Sbjct: 61 IPFTDLINEEKPP--ISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSY 118 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + G EE + G + L I ++Y L G S I H + N R Sbjct: 119 ESKGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRAYML 178 Query: 180 HT 181 Sbjct: 179 LY 180 >UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF Length = 180 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 73/176 (41%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + GKR+ +R + L+Q E + LT IS +E+D SP+I TL +L+V G + + Sbjct: 1 MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKD 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF E E + + E +G +K + + + + + + + Sbjct: 61 FFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 E VL+GE+ + + +Y G++ + H N S +I T Sbjct: 121 SLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSNEQATLILVAT 176 >UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A8GBR8_SERP5 Length = 189 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + L +RLS++RQQQG S A+ +G++ + +S +E+ + SP S L KL YG Sbjct: 5 LESADLRLAQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYG 64 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT- 119 L++S SE E + Q + + G V I T + G Sbjct: 65 LTMSRLLSEVEDEPPELLHREQQTVWVDRASGFHRCSVSPPAALYKAEFIECTLEAGAVI 124 Query: 120 -TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 H E +L G + LT+ G+ + L G F + Sbjct: 125 AYDAPSIHALEHHLWLLAGRLELTLEGRTFQLEPGDCLRYRLFGASKFHASGPEPAHYTL 184 Query: 179 AHTPT 183 + Sbjct: 185 VISRP 189 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%) Query: 1 MSDEG---LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M+D+ A + + +R G S + A +G++ + +EQ + +P + TL ++ + Sbjct: 1 MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60 Query: 58 VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117 G+ L+ E+P + ++ G G S L+ ++ + +PG Sbjct: 61 ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120 Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G EI V EG + +T++GQ + + AG + PHS+SN +CR Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 Query: 177 ISAH 180 + Sbjct: 181 VLTV 184 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 R E+R+ + S R AA+ +G++ S +S IE+ SP + L KL + +G+S+S+ Sbjct: 5 LATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLV 64 Query: 68 SEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125 E + V+ + + + + G + + + N + + P ++G Sbjct: 65 GGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPP 124 Query: 126 HQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180 H+ EE TV G + L + + Y L AG + + H F N S Sbjct: 125 HRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFIVI 182 >UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ Length = 213 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 2/183 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + G+ L +R++ GLS + A SG++ + + IE K +P I+ L ++ + + Sbjct: 20 TKLSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQV 79 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S+ S P V ++ ++ + G + + + +++ + T + Sbjct: 80 SVPSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSED 139 Query: 122 ERIKHQGE-EIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 G + VL GEI LTI L G S N PH+ N + Sbjct: 140 VAAFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLV 199 Query: 180 HTP 182 P Sbjct: 200 VAP 202 >UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCS3_BACSK Length = 193 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 5/176 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + G GK L ++R +G+S A+ G++ + IEQ + +P +S + K+ + Sbjct: 13 QEAGKQIGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKIANGLHI 72 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++ S D N+ + ++ + + QP Sbjct: 73 PITALLSFEA--DVAIARANKAMKLSSSDDEFIVEPLFR--SQGLMECYRGYLQPQCRYE 128 Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G E TV+ G++ + + G+ +HL A S PH++ N + Sbjct: 129 SEAHRLGVVETVTVMAGQLTIEVEGESHHLSAYDSIHFKGDRPHAYINLGKETAVL 184 >UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMB1_VEREI Length = 208 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 5/182 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G + E+R ++GL+ + +E +G++ +S IE + TL ++ + G+++S Sbjct: 23 SVGAAIRELRLREGLTIAQVSEQAGISRGMLSKIETGSTMAGLDTLARIARTLGVAMSAL 82 Query: 67 FSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTG 121 F + + + + +E+ G S L+ G P + T + Sbjct: 83 FGKYDASAAMAQHVKRGAGMEVVRRGTKSGHSYHLLAYGQGPVKWFEPFLITMADDSQRY 142 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 +H G E +LEG I Q Y L G + + + H N R +S Sbjct: 143 PSFQHPGTEFLYMLEGVIEYRCGQQTYVLEPGDALSFDGQALHGPENLMQCPIRFLSIII 202 Query: 182 PT 183 Sbjct: 203 YP 204 >UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=Rhodobacterales RepID=Q1GGY8_SILST Length = 209 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 5/183 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E L G R+ E+R+Q+ + AA +GL S +S IE ++SP L+KL +S+ Sbjct: 23 EALDLGARVRELRKQRDWTLEHAASQAGLARSTLSKIENGQMSPTYDALKKLAVGLQISV 82 Query: 64 SEFFSEPEKPDE--PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119 + F+ P++ +V + + +L+ +G + + + Sbjct: 83 PQLFTPPQRDQVNGRMIVTKFGEGSAHATATYEHELLADGLTRKNMLPYRARVRARSMDE 142 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 ++H GEE VL G + L + + G S + + H+ + S+ I+ Sbjct: 143 FDGWVRHDGEEFMYVLTGVVKLYTEFYEPVEMRRGDSAYYDGAMGHNVISVSSEDATILW 202 Query: 179 AHT 181 + Sbjct: 203 VTS 205 >UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=Myxococcales RepID=B8JEE6_ANAD2 Length = 260 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 1/183 (0%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 D G L +R Q+ LS + ++LSG++ + + IE + +P I+ L K+ + Sbjct: 74 KDLTPVVGTNLRRLRTQRDLSLEKLSKLSGVSRAMLGQIELGQSAPTINVLWKISSALSV 133 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S + + ++ S + + + R + PG+ Sbjct: 134 PFSALITARSTGGLHVLRAEHAKVLSSHDGSYSSRALFPFDEPRRVEFYELRMAPGSVER 193 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + G E V G + + + G+ L G + PH + + + + Sbjct: 194 ADAHNPGTIENLVVAAGAVEIEVPGRKEQLGTGDAIVFQADAPHVYRSRADVETVMYLVM 253 Query: 181 TPT 183 T Sbjct: 254 TYA 256 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 2/184 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + K L +IR + GLS ++L+G++ + IE+++V+P IST+ K+ Sbjct: 26 MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S + SE E + + N + S+ V N +R + + PG Sbjct: 86 ISFTSLLSEKEADVKTVELNNVSPIY-DDSKKWRFYPVFNFEDSRPFEISYVEADPGVVM 144 Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 EE TV EGE+ L+I + Y + G S +PH + N S+ + I Sbjct: 145 SSDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVIHMM 204 Query: 180 HTPT 183 Sbjct: 205 LYYP 208 >UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria RepID=Q7MEH5_VIBVY Length = 232 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 5/182 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 E L G+R+ E+R + G++ A++ +GL S +S IE +++SP +QKL + + Sbjct: 49 EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108 Query: 64 SEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119 + F P K + + +Q +L+ N+ + Sbjct: 109 PQLFEPPRKKVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHARTFEE 168 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G+ ++H GEE +L G + + L G S + + H + S I+ Sbjct: 169 YGDWVRHDGEEFLLILSGAVQFYSEFYEPVVLSEGDSVYYDANMGHMLVSVSEEDAHILW 228 Query: 179 AH 180 Sbjct: 229 VT 230 >UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAA2_9FIRM Length = 212 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 4/187 (2%) Query: 3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62 D+ GK + R Q LS ++ AE ++ S +S IE K +P+++TL+ + + + Sbjct: 26 DQMDKLGKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVP 85 Query: 63 LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL---VHNGNPNRTLAMIFETYQPGTT 119 + F E + V N I + +L + + + L + Sbjct: 86 MFTLFIEEDIDRPILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAYQY 145 Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + H GEE+ G+I L + + L G S I H + N S C II Sbjct: 146 NSDNFNFHNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATCAIIF 205 Query: 179 AHTPTTF 185 + +P F Sbjct: 206 SISPPIF 212 >UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium thermocellum RepID=A3DCV9_CLOTH Length = 183 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 2/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS++ KR+ E+R+ G+S A G+ + E V +S L K+ + Sbjct: 1 MSEQIKQISKRIKELREISGISAETLARELGIDSKTYTEYESGNVDIPVSLLFKIAGRFN 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + LSE + V+ +D + + + + + N+ + T +P + Sbjct: 61 VELSEILTGEAPKLHTYCVVRKDKGVSVERRKDYKYQSLAYNFANKKIEPFLVTVEPDSN 120 Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + H G+E V+EG + + ING + L G S ++G H + + ++ Sbjct: 121 SEVNYNSHPGQEFNYVIEGVLKVIINGHEIILNEGDSLFFDSGAKHGMKAMNGKPAKFLA 180 Query: 179 AH 180 Sbjct: 181 II 182 >UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3I6C0_9BACI Length = 182 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 L G ++ ++R++ +SQ A LT S IS IE K +P++ TL K+ +++ + ++ Sbjct: 4 LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMAW 63 Query: 66 FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 F + + V + + +E G +L+ N + + T G Sbjct: 64 FVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLALY 123 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H+ +E ++ G I+L + + YHL G S + H F N S+ ++++ + Sbjct: 124 THENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIY 179 >UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5 Tax=Actinobacteria (class) RepID=A0JT75_ARTS2 Length = 191 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 4/183 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ +A G R+ RQ Q L+ + A+ +GLT +S +E+D SP++++L L +V + Sbjct: 9 SNIPVAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSI 68 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S+ + F+ PE ++ I +G +G+ +L+ + R + G Sbjct: 69 SIGDLFAAPETH---LTKKDEGPRISLGGEGIIERLLTARSERRVQIIQAVIEPRGRGES 125 Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 E + ++ V+ G I L + ++Y L G + PH++ N + ++ Sbjct: 126 ELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLWVL 185 Query: 181 TPT 183 P Sbjct: 186 VPA 188 >UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2H2_ACIC5 Length = 260 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 5/181 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G+R+ +R ++ + +GL+ S +S +E +V P + L ++ V+ LS Sbjct: 25 EKRIGERIKRLRLKKSMGLVELGRHTGLSASFLSQLETGRVVPTLRNLARIAMVFSKDLS 84 Query: 65 EFFSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTT 119 FF + + + + + P+R L + + P T Sbjct: 85 YFFETEPHTLFRVHKKKERVRLPQTGVDDPTYFFESLGYMVPDRMLDPYYAEFVPLKKGT 144 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 H G E V+ GE+ + + + L G + PH++ ++ Sbjct: 145 EVRAHVHPGFEFLYVISGELEIKHGEKLHVLEGGDGVYFDASTPHAYQCAGKTPAAVVIV 204 Query: 180 H 180 Sbjct: 205 T 205 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 + G + ++R+ ++ A+ +G T I+++E D++SP++S L +L + G+ Sbjct: 351 DSSFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPG 410 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-R 123 F + EK +Q S +++ N L T + Sbjct: 411 TFLRDEEKSAIRDQRAKA---YAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVE 467 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 KH+GEE VL+G++ LT++ + + L G+S N+ IPH + S R + Sbjct: 468 YKHEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K5_PELCD Length = 188 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GK+L IR + L+ + +E + ++ + IS IE+ +P++ L +L V+ S++ F Sbjct: 7 IGKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFV 66 Query: 68 SEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124 E E E + + +Q + + G + + +P T+G+ + Sbjct: 67 EEVENTHEIVHSRPGERSCTVFDDNQNLRTESFTAGLRDPQFTSFYCVIKPHGTSGDADM 126 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H G+E+ VL+G + +T+ G+ + + G+S + + +PH ++N S ++ +P Sbjct: 127 FHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWVLSP 184 >UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=C4WPS4_9RHIZ Length = 211 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 9/192 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D + G L +IR + + + ++GL S +S +E +++ L +L + G Sbjct: 1 MNDAKSSLGDILRDIRSRNHWTLAEVSAMTGLAVSTLSKVENNQMQLTYDRLIQLAQGIG 60 Query: 61 LSLSEFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114 + ++E F PDE + D + +Q + + + I Sbjct: 61 VDIAELFGAVATPDELSNVMGRRTFTKSGDGRSIITQNYDYLYICTEIYKKAMVPILAVA 120 Query: 115 QPG--TTTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSA 171 G I+H+GEE VLEGE+ L L G S + H + + S Sbjct: 121 HARTLEEFGPLIRHKGEEFIYVLEGELELHSEIYAPLRLKKGDSAYFDAMTGHGYLSVSE 180 Query: 172 GICRIISAHTPT 183 +I+ + Sbjct: 181 EPAQILCVCSTP 192 >UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDE1_OLICO Length = 208 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 10/186 (5%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 + G+R+ ++R+ Q + A GLT +S +E + +P + TL KL K G L+ Sbjct: 19 SLGRRIRQLRKMQERTLDSLATEIGLTKGYLSKVETGRQTPPLGTLSKLAKALGTDLAGL 78 Query: 67 F-------SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPG 117 +E + V ++ + G+ G + + + + T+ Sbjct: 79 VEHGPVEPAEQDFEGVSVVRADERRNVVRGATSFGYDYQSLVQNATGKHMTPFLFTFPSQ 138 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +H GEE+ VL G + + + Y L+ G + H + + Sbjct: 139 ILKEVFFEHGGEEMIFVLSGVVEFEVGNETYELMPGDCIYFDPRQRHRGRGKYGE-AKAL 197 Query: 178 SAHTPT 183 Sbjct: 198 VVLYEP 203 >UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY56_OPITP Length = 204 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 1/177 (0%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 K++ R +Q LS A S ++ +S IEQ K +P I+ + K+ + L+ Sbjct: 24 SQIIAKKILTERHRQKLSLGDLAVRSDVSKGMLSQIEQGKRNPTIAVMSKIATGLRVPLA 83 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + + N ++ I + ++ + + + + P Sbjct: 84 RLLPDDGPRVWRVIRANDENHILFDNDEHQLRTLSPIDLEKQVEFYELILHPHGKLVSDP 143 Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 +G EEI TV +G + + ++ L G S +PH+ N Sbjct: 144 HARGAEEILTVAKGHVQVKSGEKETELRRGDSAYYAADVPHAIVNLGNTEAVAYMIV 200 >UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RH93_9CLOT Length = 184 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+++ ++R+++ L+ + AE +GL+ IS +E+ V P++S+L+K+ + G+S Sbjct: 2 VGEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP-YLL 60 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP----NRTLAMIFETYQPGTTTGER 123 + + V +Q +I+ + ++V + ++ + F+ G + E Sbjct: 61 VDQSEHHPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120 Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 + H EEI +L+GE + + YHL AG S + +PH NT TP Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFCVMTP 179 >UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cellular organisms RepID=A5UJ53_METS3 Length = 193 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 10/193 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ G+++ + + + +S A S + + I ++ P+++ L K+ +V G Sbjct: 1 MPNKN-KIGEKIKTLMEVRNVSLDELANDSDVNIELVEKILNGEIIPSLTPLTKIARVLG 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEM--------GSQGVSMKLVHNGNPNRTLAMIFE 112 + + F + E+ V + D + + + + G +R + Sbjct: 60 VRIGTFIDDDEQTGPLVVRKGKSDKVVYFSGDENKTENSNLEFYSLAAGKSDRNMEPFII 119 Query: 113 TYQPG-TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 ++ + E H+GEE VLEG I + +Y L G S ++ + H +++ Sbjct: 120 DFKVDAEESHELSSHEGEEFLYVLEGTIEVIYGQNNYVLETGDSIYYDSIVSHHVHSSND 179 Query: 172 GICRIISAHTPTT 184 +I++ Sbjct: 180 ETAKILAVIYTPV 192 >UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT Length = 199 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 2/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M D + GK + RQ GLS A+ SG++ + +S +E+ + +P + ++ + G Sbjct: 1 MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 SL++ + + V +Q + V + + +R L + + G ++ Sbjct: 61 CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120 Query: 121 GERIK--HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 GE E+ TV+EG + + + G+ + L G S + N +I+ Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQILL 180 Query: 179 AH 180 Sbjct: 181 LI 182 >UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C6PVT7_9CLOT Length = 182 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 2/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D G L +R ++ L+ + L+G++ + + IE+ + +P IS L K+ Sbjct: 1 MNDPTYNIGSVLKRVRFERELTLEETSNLTGVSKAMLGQIERGESNPTISILWKISTGLR 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S SE + + + + + E + + V NP + PG Sbjct: 61 ISFSELLGSENDDYKAVSIDDIEPVYESDGKMILYD-VFPFNPLSGFEYFYIKLLPGAHH 119 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 EE V +G + LT+ Q + L + + H++SN Sbjct: 120 VSTPHQSSVEEYIVVTKGTLKLTLGEQTFELTSPAALRFKPNKSHTYSNPYDEEVIF 176 >UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8Q5_9ENTR Length = 199 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + G RL +R+ +G+ AE G++ S IS +E++ +I+TL K+ +V G+ Sbjct: 15 NTPDFNVGIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGI 74 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 + ++ F + P V Q I +G + + L+ G + + + E G + Sbjct: 75 TPAKLF---DPPSTSFVPAGQGTPISLGGEKMREYLISGGVNDDMMVLYSEIDPLGGSGA 131 Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISA 179 E + ++ VL GE+ + + Q Y L G + +PH++ N S +C I Sbjct: 132 EPYTLNAAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWV 191 Query: 180 HTPT 183 P Sbjct: 192 IVPP 195 >UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UA69_SINMW Length = 182 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%) Query: 24 RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83 R A SG++HS IS IE+D++SP+I TL +L G +L FFS+ + + Sbjct: 20 RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79 Query: 84 DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142 DLIE+G +S +++ +PNR + M+ E Y G TGE H +E G VL G + +T Sbjct: 80 DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139 Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185 + Q L G Y ++ +PH F N G ++SA TP T+ Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182 >UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BBN6_PARDP Length = 211 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 6/181 (3%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 L G RL +R+ Q L+ + A L+G++ SA+S IE++ +SP ++TLQ++ + LS Sbjct: 25 PLELGPRLKALRKGQQLTLQEVARLTGVSTSALSKIERNDLSPTLTTLQRIASGLQVELS 84 Query: 65 EFFSEPEKPDE---PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119 + + + + + + KL+ ++ I + Sbjct: 85 ALLGDEPGHAPTTGRRSIARAGQGDNLNNATCNNKLLCADLKDKCFTPIRTVVKARSPED 144 Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 GE TVL+GE+V+ + L G S + H +++ +I Sbjct: 145 YEAWGVSDGEIFLTVLKGELVIHSRIYEPLVLYPGDSMYYDASTEHCWTSQGDVDAELIW 204 Query: 179 A 179 Sbjct: 205 V 205 >UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria RepID=A1AL86_PELPD Length = 192 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D G +++ IR+ GL++ + AE + + I+ +EQ +++P+++ L K+ + G Sbjct: 1 MTDRN-RIGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIE--------MGSQGVSMKLVHNGNPNRTLAMIFE 112 + L + +++ I + + + R + Sbjct: 60 VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119 Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171 +P G + H+GEE +L+G + + Y L G S ++ +PH + + Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179 Query: 172 GICRIISAHTPT 183 RI++ Sbjct: 180 DSARILAVVYAP 191 >UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium sp. Marseille RepID=A6T0N3_JANMA Length = 221 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 9/192 (4%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +SD L G+R+SE+R +G +Q R A +G T +S IE K+ P I TL K+ + Sbjct: 13 LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72 Query: 61 LSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQ 115 L+E V + + + G + G + N ++ + + Sbjct: 73 TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVFP 132 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTI----NGQDYHLVAGQSYAINTGIPHSFSNTSA 171 R H+GEE V +G++ + Q + L AG S ++ IPH + Sbjct: 133 NEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPHRGRSIKG 192 Query: 172 GICRIISAHTPT 183 ++ P Sbjct: 193 ESKALVVIFRPP 204 >UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli RepID=A5IRY5_STAA9 Length = 179 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 3/177 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G ++ +R+ + L+Q AE + L+ IS IE + SP++ T +++V G + SE Sbjct: 1 MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSE 60 Query: 66 FFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 FF + E E + ++ +I +G + + + + + + T +PG + Sbjct: 61 FFKDSEN--EKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDMEPLILTLKPGASYKNFN 118 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 + + + G+I L + + Y H SN S RI+ T Sbjct: 119 PSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVAT 175 >UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rhizobiaceae RepID=A6UF59_SINMW Length = 197 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 3/181 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S G R+ +R Q L+ A +G++ + IS IE+ + SP L +L G Sbjct: 11 SQLDEVVGMRVRALRAAQDLTLDDLANRAGVSRAMISRIERGEASPTAQLLARLCSALGT 70 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-- 119 +LS F+ P L G + V + ++ + PG Sbjct: 71 TLSALFASGVSEASPLARRQDQRLWRDPESGYLRRSVSPEGVGSPIDIVEVEFPPGARVV 130 Query: 120 -TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + + + + G + LT+ L G + H F N Sbjct: 131 FERQPMDRGITQHLWLFSGRLELTMESGQQLLEPGDCLFMGLEEAHIFHNPYEEAAHYAI 190 Query: 179 A 179 Sbjct: 191 V 191 >UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RGE3_PHEZH Length = 206 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 5/185 (2%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + + G + R++ GL+ + AE SGL+ + IS IE+ K +P+I +L ++ G+ + Sbjct: 20 DRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGVGV 79 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 + F +E + +D + + N P + L + QPG + Sbjct: 80 NHFV--EATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISEAA 137 Query: 124 IK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H GE VLEG + G + L G S + SN +++ Sbjct: 138 NIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLWVG 197 Query: 181 TPTTF 185 + F Sbjct: 198 SVVLF 202 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 2/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M RL ++R +G S ++ A++SG++ SA+S IE +VSP TL + + Sbjct: 1 MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +++S+ + E P +P V + G S ++V + +I T +P Sbjct: 61 MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120 Query: 121 GER-IKHQGEE-IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 G E +LEG + +T+ + + L AG P F C +I Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLIM 180 Query: 179 AH 180 Sbjct: 181 LV 182 >UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58B91 Length = 197 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 3/185 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 SD + G + +R G++ R AE GL+ +S E+ S ++++L + + Sbjct: 4 SDPAVRVGAEIKRVRSSLGMTLRELAERCGLSPGFLSLAERGVNSISLTSLFAIAGALEV 63 Query: 62 SLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 E K + + +++ P++ + ++ P Sbjct: 64 DAVELLGSAGKRSRAEYAVSRRDDPRAARVVMGEREHRVLTAELPDQHIEVLATRVNPTN 123 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 +H GEE V+ GE+ + + L AG + + PH+ N + ++ Sbjct: 124 APSPVTRHDGEEFCYVVSGELTFLMPDESVVLAAGDAIHFKSSTPHAVHNQGDVVAEVLW 183 Query: 179 AHTPT 183 Sbjct: 184 TVDRP 188 >UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria RepID=Q46QV6_RALEJ Length = 188 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 3/181 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + D A + R+ + S AE SG++ + IS IE+ + SP + L KL +G Sbjct: 5 LQDPTFAISTCVRVERESREWSLADLAERSGVSKAMISKIERGEASPTATVLGKLSGAFG 64 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 L LS + E+ E + G + + V + L ++ T PG Sbjct: 65 LPLSMLLARAEQAGERLSRAADQPVWTDPETGYTRRAVSPRSGG-MLELVEVTLPPGARV 123 Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + + G +V + L AG + P +F N + C + Sbjct: 124 SYPPSAFTFLHQQIWLRSGALVFQEGEITHELEAGDCLQLGPPAPCTFYNPGSKPCSYVV 183 Query: 179 A 179 A Sbjct: 184 A 184 >UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRJ5_MYCS2 Length = 189 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G RL + R+++G+S A + +T +S E+ + ++ L ++ G+ + + F Sbjct: 5 GARLRQFRRERGMSLTDVAAKAEVTKGFLSLAERGMTNVSVPVLMRICDALGIGIGDLF- 63 Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128 E P P V +EMG GV +L+ + ++ +PG +G + Sbjct: 64 --EYPAAPIVRSGAGAPLEMGGHGVREELLTP-KTEHHVQVMRTVMRPGGGSGGAYRLDA 120 Query: 129 EEIG-TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 I VL G + +T++G+ L G H + N +AG ++ P Sbjct: 121 ATIVAYVLRGALSITVDGETVVLNVGDCLTFGAKQLHDWHNPTAGEAEVLWTIAPPV 177 >UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Comamonadaceae RepID=A1WEC3_VEREI Length = 229 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 6/184 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 L G++L RQ GL ++ A G++ S +S +E+ S ++ TL L + L + Sbjct: 42 IDLWLGEQLRRRRQALGLPLQQVARACGISVSLLSQLERGLRSISMRTLGALAQELRLPI 101 Query: 64 SEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + I++G +G+ + + + + M PG + Sbjct: 102 ETLVRNTRYSEGEAEGAVARAGTHRRIDLGDKGIHKENLTPPAASGGVQMYRAVIDPGGS 161 Query: 120 TGE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 TG+ + H+GE++G V+EG++ L + + L AG S+ + + N I+ Sbjct: 162 TGDDLFLTHKGEQVGYVIEGQLDLFVQERLLKLKAGDSFCYGGDMSRRWRNPGQTSTTIL 221 Query: 178 SAHT 181 A T Sbjct: 222 WAIT 225 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+D L G++++E+R++Q LS R A+L+ +T S +S IE+ +P++++L+ + Sbjct: 1 MND--LNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58 Query: 61 LSLSEFF-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + L FF SE +K + N+ +I GS+ V +++ + L P T+ Sbjct: 59 VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGN-LEFAIMDLAPNTS 117 Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 + +RI H G+EI VLEGE+ L ++ ++ L G S + G H + N S ++I Sbjct: 118 SCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIF 177 Query: 179 AH 180 A Sbjct: 178 AV 179 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 3/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M+ + L +R ++ LS + AELS ++ +S IE+ +P I+TL K+ Sbjct: 1 MN-INSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLK 59 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + + + E N + I + P R + G + Sbjct: 60 VPYTLLLEQKEYDTCIIKKSNLEPQIS-EEGHYRAYCYYTNTPYRNFELFQIELDEGCSY 118 Query: 121 GERIKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + EE VLEGE+ L +N + Y L S + + H +SN G + Sbjct: 119 RSVGHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKATIT 178 Query: 180 HTPTT 184 + Sbjct: 179 NFYPV 183 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 6/168 (3%) Query: 12 LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71 L +RQ++G++ A +GLT S +S +E+ + P+I+ K+ + + +++ FS+ Sbjct: 5 LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64 Query: 72 KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131 + V + V + ++ TT H G+E Sbjct: 65 EVSTISVDRAAER------GADRHHAVAARMLGKEMSPFVVRPGRTFTTHPHPTHLGQEF 118 Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 V G + L+ +G+ L AG + PH ++ Sbjct: 119 IFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166 >UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHK0_EUBSP Length = 184 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + L EIR+ +GLS +A+ L+ ++ S +S +E+ +V+P IST+ KL Sbjct: 1 MERLNQIIAENLKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLK 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETY-QPG 117 + ++ F + +P + +++ + +L + N + + + + G Sbjct: 61 VPVTAFTLD---KPKPFSKTGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFDEGG 117 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI- 176 G R + E TV G++ L+ ++Y L AG++ + N + + NT G+ Sbjct: 118 MMPGNRQMNGTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTAS 177 Query: 177 ISAHTP 182 I H P Sbjct: 178 IVVHYP 183 >UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TWB6_FUSNP Length = 182 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 74/177 (41%), Gaps = 3/177 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M + + + IRQ++ LS A+LS ++ S ++ IE+ + +P +STL K+ Sbjct: 1 MDRLNILVSENIKRIRQEKNLSLGDLAKLSDVSKSMLAQIERGEGNPTLSTLWKIANGMQ 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S + ++P+ P + + + +++M + L + ++ + Sbjct: 61 VSFNTLIAQPKLPYKVTKLAEIEPILDMNGGLKNYSLFS--DIENNFSVYQIEVGKEISW 118 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176 G E V++G + + + + + L G++ IPH + N G Sbjct: 119 ISEAHLSGTAEFVIVIQGTLEIKLEEKTFILKKGENLWFKADIPHGYCNLDEGTTIF 175 >UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C5PR45_9SPHI Length = 205 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 77/187 (41%), Gaps = 8/187 (4%) Query: 1 MSDEGL-APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59 M D + R+ EIR+ +G++ + A+ +G++ IS +E ++ P++ L ++ Sbjct: 13 MKDNTIFKISSRIKEIRKGKGITIQDLADRAGVSKGLISQVENNRTVPSLLVLINIIGAL 72 Query: 60 GLSLSEFFSE--PEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFET 113 + L+EFF + P +V ++ + + ++ N T+ ++ Sbjct: 73 EIDLTEFFKGFTSDGDLGPVIVRRKEQYESFEKEHALGFMYKRIFTTSIVNSTMDIVLLE 132 Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173 +P + + E +L GE+ + HL G S + + HS N+ Sbjct: 133 LEPDANR-PMVTTEAFEYKYILAGEVEYIFENEVVHLKEGDSILFDGRLSHSPRNSGTQK 191 Query: 174 CRIISAH 180 ++ + Sbjct: 192 ASMLIVY 198 >UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax=Vibrio RepID=A5F6U2_VIBC3 Length = 181 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 10/185 (5%) Query: 1 MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58 M+D +L +R+ +GLS A+L+G++ + + IE+ + SP I+TL K+ Sbjct: 1 MTDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASG 60 Query: 59 YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 S S FF+ + + + + + + L + T Sbjct: 61 LEASFSAFFANDPQLLSS-------ERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHH 113 Query: 119 TTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 G E VLEG + + + Q + L G+ + PH ++ + Sbjct: 114 QQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQN 173 Query: 178 SAHTP 182 P Sbjct: 174 IVAYP 178 >UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria RepID=Q4ZU57_PSEU2 Length = 201 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 5/178 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G ++ RQ Q L A ++G++ +S IE +VS ++ L +L V G+ +S+ F Sbjct: 17 LGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLF 76 Query: 68 SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTGE 122 S+ ++ +++ D+ +E+ +G + L+++ P ++ T + Sbjct: 77 SQYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFP 136 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 H G E +LEGE++ Q Y + AG S + IPH +++S Sbjct: 137 TFSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPHGPEQLVQVPIKLLSIM 194 >UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11I99_MESSB Length = 198 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 5/181 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 + +R+ +GL+ A G + +S +E+ P+++ L+ L + + +S F Sbjct: 20 LASDIRRLRKARGLTLAGLASQLGRSVGWLSQVERGISLPSVADLRALANHFKVPVSFFL 79 Query: 68 SE---PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 + EK + V ++ + G V +L+ R +I + T + Sbjct: 80 TPAASDEKELQVVVRADKRRKLVSGQPRVLEELLSPNLGGR-FEIICCEFAGNTPLPQPR 138 Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 K EE G V+ G + + + G+ Y L AG S+ + + N ++ +P Sbjct: 139 KRAAEEAGYVVSGALDIEVTGKWYELSAGDSFRVRGETL-RWRNPHEEPAIVVWVVSPPV 197 Query: 185 F 185 + Sbjct: 198 Y 198 >UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWR1_9RHOB Length = 331 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 2/159 (1%) Query: 21 LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80 ++ + + +SG++ +S +E+ +P + TL ++ + + F P + Sbjct: 145 MTLQDVSNVSGVSVGYLSQVERGNATPTLGTLTQIAQALEVDTDYFVRTP-HTVDSLTRG 203 Query: 81 NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIV 140 + + + + + L PG + E + H GEEI +LEG I Sbjct: 204 DSRPKFAVAGSSIEYEQIGVERAGHELTSYVMNVPPGYES-EVVTHVGEEIIYILEGTIS 262 Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + ++Y + G S PH ++N + RI+ Sbjct: 263 QIVGEREYIMGPGDSLHYLGTTPHCWANKTDRPARILWV 301 >UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI Length = 178 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 GKRL E+R +G+S R A+ +G++ + +S IE+ P++STL+ L V+G S++ F Sbjct: 2 LGKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALF 61 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126 +P P + I VS + + +GN + ++ + PG + I H Sbjct: 62 RDPAAPSVWLSRPGERTQITGPKGTVSYERLTHGNA--PMEVLRAVFVPGQYSVAGTISH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184 E V+ G + + + G + + A ++ + H + N A I+ + TP Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTPPI 177 >UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteobacteria RepID=A8HXH8_AZOC5 Length = 249 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 4/183 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + A G ++ IR+Q L+ A +G++ +S IE ++SP++STLQ + + + Sbjct: 60 TSLEQALGIQVRSIRRQLDLTVSDLANAAGISVGMLSKIENGQISPSLSTLQSVARALNV 119 Query: 62 SLSEFFSE-PEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRT-LAMIFETYQPG 117 ++ FS E+ D V Q +IE G +L+ +G + T Sbjct: 120 PITALFSTFEERHDCSYVKAGQGVVIERRGTKVGHQYELLGHGLGGDIVVEPYLITLTQE 179 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 +H G E +L GE+V + YHL G S ++ H + Sbjct: 180 AVPYTSFRHGGVEFIHMLSGEVVYRHGDRTYHLRPGDSLMFDSAAAHGPEELITRPMTYL 239 Query: 178 SAH 180 S Sbjct: 240 SII 242 >UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID=C4IIY7_CLOBU Length = 183 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 6/183 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M L IR+ + +S +E +G++ S + IE+ + +P ++ L K++ Sbjct: 1 MDYINRNVSINLKNIRKSKKMSLDVVSEQTGVSKSMLGQIERGESNPTVAILGKIVSGLR 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 +S ++ P++ + + E Q +R + +PG Sbjct: 61 VSFNDLVCMPKEEIYIVKKESLEPSKESTDQYSVYTY-FPYEEDRNFEIYMIEIKPGGVY 119 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG----ICR 175 + E V++GE+ L I+ + Y + +G + NT H + N + Sbjct: 120 TTGSHGEKTCEYINVIKGELTLEIDEKKYVIKSGDAVRFNTDKDHVYINDTNELLSFNAV 179 Query: 176 IIS 178 Sbjct: 180 FYW 182 >UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM1_DESHD Length = 179 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 3/177 (1%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + +R+ Q LS + AE + LT S +S IE++ SP++ TL+K+ G +S F Sbjct: 3 DLGSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALGYPISSF 62 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126 F P+ + I++ L++N L + E I H Sbjct: 63 FVNPQFTST-HIPAEAQRTIQINPGMTLRFLINNVGQRNQLGAYIAEVA--DLSEEIIIH 119 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 G ++ VLEGE+ + ++++L G S N +PH S S ++ A TP Sbjct: 120 HGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVATTPP 176 >UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Burkholderiales RepID=B2UK31_RALPJ Length = 198 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 5/179 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 A G +L +RQ + LS + +G++ S +S +E++ +P ++ L +L G+SL++F Sbjct: 16 AVGAKLQALRQARKLSLDELSRHAGVSKSMLSQVERNLANPTVAVLWRLATALGVSLADF 75 Query: 67 FSEP----EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122 S P + + +I+ +K++ + QPG Sbjct: 76 LSPESAADAAPAVTVIPAHSIPVIKSPDGKCELKILGPVDLAARFEWYELAIQPGGMLAS 135 Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 G +E +VL G + + + + G++ + H+ SN + + Sbjct: 136 EPHELGAKEHLSVLNGTVTVQSGPSEKKVRHGETARYPVDVQHAISNAGKTVATALLVV 194 >UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax=Rhizobiales RepID=A8I3G0_AZOC5 Length = 217 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 11/186 (5%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+ L RQ + L+ ++ AE +GL+ S +S +E ++S L +L G++++E Sbjct: 14 QLGECLKAARQARKLTLKQVAERTGLSLSTLSKVENHQMSLTYDKLLQLTNGLGIAIAEL 73 Query: 67 F--------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 F + P+ + + D + ++ S ++ + I + T Sbjct: 74 FHSAADRAPTAPQMVTARRSISRAKDGDVIDTRTYSYAYKCTDLMSKAMVPITGELRART 133 Query: 119 --TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G I+H GEE V G + + L G S I++ + H++ N R Sbjct: 134 LAEFGPLIRHPGEEYVYVTAGRVEVHTEYYAPEILETGDSLYIDSSMGHAYLNAGEDPAR 193 Query: 176 IISAHT 181 I+ T Sbjct: 194 IVCVCT 199 >UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces RepID=D1XSL5_9ACTO Length = 206 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 +DE RL ++R+ +GL+ AA + L+ + +S +E + P++ L L ++YG Sbjct: 12 ADEVPGVAPRLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGT 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++SE E + V + G++ + G R + + GT + Sbjct: 72 TVSELLGEMPPERDAIVR---GGPLGAGAEADGWRYRQAGGSGRAMQALRVHVPHGTESE 128 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE VLEG + + + + L AG S ++ PH + +++ HT Sbjct: 129 LVRVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188 >UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IK40_BORPD Length = 219 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 7/184 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 G++L ++R+Q GLS + A+ G++ +S +E+ SP++ + L +G+S+ Sbjct: 28 IDFWLGQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSV 87 Query: 64 SEFFSEPEKPD----EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 + +++ +G+ ++ R+L + PG + Sbjct: 88 DSLLRGTGQGGGEAAGRVARAGTHRRVDLLDKGIHKEMYTPP-AGRSLDLCRARIAPGGS 146 Query: 120 TGERIKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 TG+ + GE+IG VL+G + L + Q L AG S+ + P + N + + +I Sbjct: 147 TGDDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVI 206 Query: 178 SAHT 181 A + Sbjct: 207 WAIS 210 >UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=B2T7X7_BURPP Length = 212 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 4/177 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+++ +R ++ ++ + +G++ S +S IE+DK +P I+ +L G+SL Sbjct: 34 RVGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSL 93 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLV--HNGNPNRTLAMIFETYQPGTTTGERI 124 F+ P+K E V ++ + +L T QPG Sbjct: 94 FA-PQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNA 152 Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 G E TVL+G I + G L A + PH+ N G + + Sbjct: 153 HEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKALLVV 209 >UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERF8_OCEIH Length = 189 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 5/183 (2%) Query: 1 MSDEGLA-PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59 M L G ++ ++R + +Q++ A+ G++ S +S IE + + AI+TL K+ Sbjct: 1 MVPIDLQSIGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDAL 60 Query: 60 GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPGT 118 + L+ + E+ D G S +L+ N + + P Sbjct: 61 KVPLAWLLDDKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTPKH 120 Query: 119 ---TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 + H +E +LEGEI L NG+ L G S PH F + Sbjct: 121 RNLRQDKTYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLFLPVNDRGAM 180 Query: 176 IIS 178 +++ Sbjct: 181 VLT 183 >UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM0_DESHD Length = 181 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Query: 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65 + G+ + IR+++ L+ + A+ L++ IS IE++ VSP+++TL+++ + + L Sbjct: 2 IEVGEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLES 61 Query: 66 FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125 FF +P+ + + +D+ + ++G + +L+ + + + Sbjct: 62 FFLDPD-TEIIYSYLKKDEQQYIPAEGRNWRLLIDHSKTNLMGAF--VVDSTAVDKNVYS 118 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 HQG E+ VLEGE L I+ +DY L AG S + I H + ++I TP Sbjct: 119 HQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIVIATPP 176 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 2/185 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 A G R+ + R + + + A +G++ + +EQ V+P + TL +L G+ Sbjct: 70 EPLAHAIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGV 129 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 L P Q + G G LV P + + T P Sbjct: 130 GLPALVEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHD 189 Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179 G E+ V EG + + ++G Y L G + + H++ N++ R ++ Sbjct: 190 SEAHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTV 249 Query: 180 HTPTT 184 P Sbjct: 250 FEPDV 254 >UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus S110 RepID=C5CXI9_VARPS Length = 195 Score = 149 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 2/178 (1%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 RL +RQ + LS AELSG++ + IS +E+ + SP L +L G+ L++ Sbjct: 18 IAARLLALRQAKALSLAELAELSGVSKAMISKVERAESSPTAVLLGRLAAGLGVPLAQLL 77 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ--PGTTTGERIK 125 +E + + ++ G + V + + M+ Sbjct: 78 TEEKASPRRLRPRAEQEVWRDPEAGYLRRQVAERGASGGVEMVEIELPRSAQVAYPRWSG 137 Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 + +LEG + + + + L G P F CR + +P Sbjct: 138 KPYRQCLWMLEGALRVDYGEERFELAPGDCLDFGVDRPLVFKALGRAGCRYLLVASPA 195 >UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC19_9RHIZ Length = 218 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 5/179 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G + R + L+ + +GL+ + +S IE ++ L++L G+ L + Sbjct: 36 RIGAVIKRRRAEANLTLADLSAGAGLSSAMLSRIENGMAMASLDALERLCAAVGIGLGDL 95 Query: 67 FSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTG 121 F E + ++ + + +E+ G + +L+ P + F + + Sbjct: 96 FKETDTQRGSAQLVKRAEQMEVVRVGTKFGHTYRLLAYDRGPRKLFEPFFIEMDKKSESY 155 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 R H G E +L+G + + Y + G ++ + + H R ++ Sbjct: 156 PRFSHPGTEFIYMLQGRMEYRFGDRTYLVEPGDAFTFSGDVVHGPEKLLDDRIRFLAII 214 >UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAN3_NAKMY Length = 225 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 6/185 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++E G +L IR+ Q + AE SGLT +S IE+D S +++ L ++ G+ Sbjct: 12 NEETARIGAKLKAIRRAQRRTLEEVAEASGLTKGFLSKIERDLASASVAALLRICATLGI 71 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 LS F V Q I+ G Q + + R + ++ +PG +G Sbjct: 72 PLSSLFESD--STGEVVRAGQYPRIDFGGQDLEEYQLTPF-AERRVQVLRSDIRPGGGSG 128 Query: 122 -ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIIS 178 E E E V+ G + + + L G ++ + + H+F + + ++ Sbjct: 129 PEAYSLPAEVEFAYVVTGRLAIGFADRTVELGPGDAFTFDATVNHTFRAEAVDELTTVLW 188 Query: 179 AHTPT 183 P Sbjct: 189 VLCPA 193 >UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO Length = 204 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 4/180 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + + L E+R++ GL+ AA+ + L+ + +S +E + P++ L L + YG Sbjct: 10 EELAVTVAPHLRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGT 69 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 ++SE E P P V+ + + G + +G R + + G+ Sbjct: 70 TVSELLG--ETPAGPGAVVRAGTMEPTEAGGWTYWQ--SGGSGRAMQALRVRVPYGSQGD 125 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181 H GEE VL G + L + + L G S ++ PH + ++ HT Sbjct: 126 IVRVHPGEEWLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185 >UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enterobacteriaceae RepID=D1RT89_SEROD Length = 462 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 3/182 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + + G R+ R+ + S AE +G++ + + IE+ SP L +L +G Sbjct: 278 LDNINQRIGARIRIEREARHWSLSDLAERAGVSRAMVHKIERGDSSPTAMLLARLSGAFG 337 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 LS+S+ + E + + + G + V + L ++ G Sbjct: 338 LSMSKLIARAETQEGRLLRREDQPVWVDPESGYVRRHVSPRSDI-PLDLVRVELPAGAEI 396 Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 ++ +L GE+V + + AG + F N S C + Sbjct: 397 PMPASVYAFKRQLIWLLSGELVFLEGENRHEMAAGDCLELGPPADCVFKNESDEPCIYLV 456 Query: 179 AH 180 Sbjct: 457 VV 458 >UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin sensor domain n=3 Tax=Bacteria RepID=Q1IM53_ACIBL Length = 201 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 8/183 (4%) Query: 5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64 G++L +R ++ L + +GL+ + +S +E+ K+ P + TL ++ V+ + L Sbjct: 18 PYRIGEKLRALRLKKKLGLVELGKHTGLSPALLSKLERGKLFPTLPTLLRIALVFSVGLD 77 Query: 65 EFFSEPEKPDEPQVVINQDDLIEMGSQ------GVSMKLVHNGNPNRTLAMIFETYQP-G 117 FF++ E V+ +D+ + + + + L ++ Sbjct: 78 YFFAD-ESRRHVVSVVRKDERLRFPERPNTRDVAYYFESLDFAALEPKLNAFLADFEHVP 136 Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 T +HQG E L G++ L I G Y L G S ++ +PH++ N C + Sbjct: 137 AETLRLHQHQGFEFLHTLAGKLELVIGGIPYELSQGDSIYFDSSVPHTYRNAQKKPCSAL 196 Query: 178 SAH 180 Sbjct: 197 VVT 199 >UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Bacteria RepID=B2JWV8_BURP8 Length = 189 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 3/180 (1%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 + G R+ R+ +G S AE SG++ + + +E+ + SP S L KL +G+ Sbjct: 6 DNVDQRIGARIRAEREGRGWSLTSLAEKSGVSRAMVHKVERGESSPTASLLAKLAGAFGM 65 Query: 62 SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121 S+S + E D + + L G + V + L ++ P T Sbjct: 66 SMSALLALAELEDGRLLRRAEQPLWVDPQSGYVRRHVSPKSA-SPLNLVEIDLPPSTEIP 124 Query: 122 ERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +++ VL+GE+V G+ + L AG + F N S+ C+ Sbjct: 125 MPASAYLHSQQLIWVLDGELVFIEGGERHQLGAGDCLELGPPSDCVFKNESSRACKYAVV 184 >UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepID=B6BEY2_9RHOB Length = 182 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 2/183 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MS + R + G S A +G+ S +S +E +P++ TL L G Sbjct: 1 MSAPHQMIAAAIQRERNRAGKSLSALAAQAGIAKSTLSQLEAGNGNPSVETLWALAAALG 60 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 + LS F E E P + + + +E + L+ N + QPG Sbjct: 61 VPLSLLF-ETEAPSTTLIRAAEGEPLESEQSDFTAVLLSRCPSNVRRDIYRVVMQPGEAR 119 Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 + +G E V G++ +GQ+ L G Y PHS+ A ++ Sbjct: 120 RAQPHPRGTVEHMLVCSGQMRAGPDGQEDVLQPGDYYTYPGDRPHSYEALQADTLFLMVM 179 Query: 180 HTP 182 P Sbjct: 180 EAP 182 >UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=Bacteria RepID=C6CLM7_DICZE Length = 195 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 2/185 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 +S+ +RL+ +R+++G S ++ SG++ + +S +E+ + SP L +L VYG Sbjct: 11 LSETDRRLAERLAALRRERGWSLDELSQSSGISRATLSRLERMESSPTAVLLGRLCAVYG 70 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--T 118 ++S +E E ++ Q + G + V + MI G Sbjct: 71 CTMSSLLAEVEIQLPQKLSAAQQPVWIDPETGFIRRSVSPPSAGFRAEMIHGELPAGARI 130 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178 E VLEG++V+T+ G + L S F N R + Sbjct: 131 DYHAPPLAGLEHHLYVLEGQLVMTLEGVIHTLGPQDSLRYRLYGASGFHNPGPDAVRYLI 190 Query: 179 AHTPT 183 A Sbjct: 191 AICTP 195 >UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I731_AZOC5 Length = 231 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 5/188 (2%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 S+ A G + E R +GLS +R A+ +GL+ +S +E+ SP++ L+ + G+ Sbjct: 45 SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104 Query: 62 SLSEFFSEPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 ++ F E P + Q +++G++G+ + + + TL ++ PG Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSDL-STLQIMEIILAPGG 163 Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++GE H GEE G V+EG + L I+G + L+ G S+A + +PH F N S G+ R++ Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223 Query: 178 SAHTPTTF 185 TP + Sbjct: 224 WITTPPVW 231 >UniRef50_B2JNZ3 Transcriptional regulator, XRE family n=4 Tax=Burkholderia RepID=B2JNZ3_BURP8 Length = 215 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 6/181 (3%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 + A G RL + R+ +GL+ + +E SG+ S IS E+ ++ L L Sbjct: 21 DHQAVGARLRDARKARGLTLMQLSEQSGIAVSTISKAERGDIALTYDKFAALAHALQLEF 80 Query: 64 SEFFSEPEKPDEPQVV---INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118 F ++ +V + + + ++ N + + + + Sbjct: 81 DAIFGRAKRSGSSPIVPTFTASGEQMIYDTPNYEYGMLANDLTGKRMVPMRAHVRARKLS 140 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + I+H GEE +L G + L G + L G S ++ + H + +T ++ Sbjct: 141 DFPDYIRHSGEEFVFLLNGSLELRFETGAVFQLKPGDSLYFDSAVGHVYLSTGKKPAEVL 200 Query: 178 S 178 Sbjct: 201 V 201 >UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VF82_SPHWW Length = 252 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 9/181 (4%) Query: 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68 G L R +GLS R A +GL S +S +E K+ L L + G+ + + FS Sbjct: 40 GPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLFS 99 Query: 69 EPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTT 120 + + +I + E S+ + ++ + + + Sbjct: 100 TAAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVEARTLEEY 159 Query: 121 GERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179 +H+GEE VL G + L + L G S ++G+ H++ S G CR++S Sbjct: 160 RGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRLLSI 219 Query: 180 H 180 Sbjct: 220 C 220 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 3/167 (1%) Query: 20 GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQV- 78 GLS + A +GL+ +S +E+ SP++ L +L + + L+ F P EP V Sbjct: 38 GLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLASLFGAAPGPAEPIVT 97 Query: 79 VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQGEEIGTVLEG 137 ++ + + G++ +L+ + L++ PG +TG+ H GEE G VLEG Sbjct: 98 RPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEALTHGGEEAGLVLEG 157 Query: 138 EIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAHTPT 183 + L + L AG S+ + PH + N S ++ + Sbjct: 158 RLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNAVP 204 >UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales RepID=D2PZI7_9ACTO Length = 200 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 4/177 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G L R +QG+S A SG+ +S +E +P I T+ L G+ +S Sbjct: 14 LGVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVSALL 73 Query: 68 SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIKH 126 SEP P V++ D + V ++++ NP + + +PG H Sbjct: 74 SEP--PASDLVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTG-H 130 Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 G E VL G + +T + L G A PH + + ++ P Sbjct: 131 PGTEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEYEALDGEVRSVLLLEYPP 187 >UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LD32_RALME Length = 251 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 6/181 (3%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 GKRL R+ G + AELSG++ + IS E+ +++ + K + + E Sbjct: 20 TFGKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEM 79 Query: 67 FSEPEKPDEPQ---VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123 F+ + P +V + + Q ++ + + + ++ T TG Sbjct: 80 FAGAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPE 139 Query: 124 I--KHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 + H GEE VL GE+ + NG+ L G S + + H++ + S + R I Sbjct: 140 VFASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVT 199 Query: 181 T 181 T Sbjct: 200 T 200 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G + E+RQ+ L+ ++ +G++ +S IE + S ++ TL++L+ V G+SLS F Sbjct: 25 LGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALF 84 Query: 68 SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGE 122 E E ++ + E+ G + +L+ + + T + Sbjct: 85 KGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERSEPFA 144 Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 +H G E VLEG++ Q Y L AG + + IPH R ++ Sbjct: 145 AFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPHGPELLIDLPIRFLATV 202 >UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4U4_9BACT Length = 193 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 6/182 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 M ++ +A G R+ R+++ ++ + A+ +GLT +S IE + P++ L + Sbjct: 1 MREQLIALGTRIKMARKERKMTLQTLADRTGLTAGLLSKIENFRTIPSLPVLVDIAAALE 60 Query: 61 LSLSEFFSE---PEKPDEPQVVINQDDLIEMGSQGV-SMKLVH-NGNPNRTLAMIFETYQ 115 L+EFF + K V + +E +++ + M++ T Sbjct: 61 TDLAEFFRDMTLGSKARWLLVRPEEQKTVEREEGRHLHYRMIFETSLSAVNMQMMYVTIP 120 Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175 G+ GE + +G+E+ +L+G + + L G + + +PH N S Sbjct: 121 CGSG-GEPVSTEGDELLYILDGRFRYRLGDEVVELTPGDALYFDGTLPHVPENDSGAPGT 179 Query: 176 II 177 +I Sbjct: 180 LI 181 >UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales RepID=A1BBT3_PARDP Length = 184 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 6/182 (3%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G+ + +R+ +G++ A G + +S +E+ + +P++ L ++ G+++S FF Sbjct: 5 VGEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFF 64 Query: 68 -SEPEKPDEPQVVINQDDLIEMG--SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124 S P+E +V+ D +G G+ +L+ MI T+ PG ++G R Sbjct: 65 RSSSRAPEERGLVLRAADRTPIGSQESGLVEELLSPTLSGS-FEMIKSTFAPGASSGGRR 123 Query: 125 KHQGEEIGTVL-EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 K + +E G VL G + L I ++ L G S+ +++ N I +P Sbjct: 124 KARPKEDGGVLISGRLTLIIGDREIQLEPGDSFQFR-ETDYAWRNDGKEPAVAIWIVSPP 182 Query: 184 TF 185 + Sbjct: 183 IY 184 >UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales RepID=Q21W54_RHOFD Length = 273 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 6/188 (3%) Query: 2 SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61 ++ G R RQ+Q LS +A++LSGL S IST E+ +++LQ+L Y Sbjct: 88 QEKTRQLGVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNT 147 Query: 62 SLSEFFSEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 S+++ + EK V N+ + + G+++ + + L T QPG Sbjct: 148 SVTKLTAPEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAENLES--LDCQKWTLQPGA 205 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 + H+GEE +L+G + +TI G+ L G S + ++ H++ ++ Sbjct: 206 GSDGAYSHEGEEFIHILQGVLTITIDGGEQISLGEGDSISFSSQSAHAWRAVGDIPTMLL 265 Query: 178 SAHTPTTF 185 +TP +F Sbjct: 266 WINTPKSF 273 >UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2V3_9SPHI Length = 194 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 85/190 (44%), Gaps = 11/190 (5%) Query: 1 MSDEG---LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57 M+ + G ++ IR+++G A+ SG++ + +S IE +V P I +L +++ Sbjct: 1 MTSPEHLTIQIGNKIKGIRKEKGWKLGEFADKSGMSIAMLSKIENGRVIPTIPSLMQIIN 60 Query: 58 VYGLSLSEFFSE--PEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT-LAMI 110 L+L++FFS+ + + ++D + + + G +++ N ++ + + Sbjct: 61 TLNLNLADFFSDLKVDGDFNGFIFRKKEDYVSLSKEEDSVGYHYQMILNFPIDKASMEIS 120 Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170 T E++ G E +++G++ + + + G S + +PH NT Sbjct: 121 LLTLDSHAQR-EKLSTSGFEYIYLIKGKLTYELGDETLEMEEGDSLFFDGEMPHVPKNTQ 179 Query: 171 AGICRIISAH 180 + ++ + Sbjct: 180 SNEAILLVVY 189 >UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VD2_BRAJA Length = 196 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 2/179 (1%) Query: 4 EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63 A G+RL +R Q G++ A SG++ + I +E+ + S + L KL ++L Sbjct: 9 LDRAIGRRLKTLRTQAGMTLNELAGRSGVSRAMIGRVERAQSSATAALLNKLCAALDVTL 68 Query: 64 SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT--TG 121 S+ + EKP E + + G + + + +I G Sbjct: 69 SDVVALAEKPPERLMRLADQPHWRDPDSGYRRRHASPPDAASGIEIIVVDLPAGARVSYS 128 Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180 ++ + +LEG + + I+ + L G + +F N + R + Sbjct: 129 PWGRNAFTQQLLMLEGAVCVHIDAKTVRLRDGDCLDFDVMRAVTFENETRQDARYVIIT 187 >UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3 Length = 220 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 4/181 (2%) Query: 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66 G+RL +RQ + L+ A++L+G+ + S IE +K+SP L ++++ G + Sbjct: 30 QIGQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDV 89 Query: 67 FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL-VHNGNPNRTLAMIFETYQPG--TTTGER 123 + + V + +D++ + + + + + + + + G Sbjct: 90 LTNQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHRDSSAGMITLRMQVDARTVDEAGGL 149 Query: 124 IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182 H+G+E VL GE+ L G+ L AG+S ++ PH++ S ++ TP Sbjct: 150 AGHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLTP 209 Query: 183 T 183 Sbjct: 210 P 210 >UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30FD5 Length = 205 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Query: 25 RAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD 84 A +G++ S +S +E + I L +L+ YG+S++E P D V ++ Sbjct: 44 DVARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETR 103 Query: 85 LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTIN 144 + +G ++ L+ +G +RT+ + PG + E H GEE VL G + L ++ Sbjct: 104 QLHSPEEGTTIYLLASG-TDRTMLPMLLELAPGASLAESGHHAGEEFVHVLAGRLRLEVD 162 Query: 145 G-QDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAHTPT 183 G + + L AG S + PH F N S R+I +P Sbjct: 163 GAEPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSPP 203 >UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L3_9CLOT Length = 215 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 3/184 (1%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 + D L EIR+ + LS + + L+ ++ S +S +E+ +V+P IST+ KL Sbjct: 32 LEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK 91 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTT 119 + ++ F+ P+ Q + + + V + + + + + G Sbjct: 92 VPVTA-FTAPKPTPFSQTSKAEVSPLVSDDGRYRLYPVFSFRDGQDFEIFDFEFDEGGQM 150 Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIIS 178 G R E TV G++ L ++Y L AG S A N + + NT G I I Sbjct: 151 AGNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIV 210 Query: 179 AHTP 182 H P Sbjct: 211 VHYP 214 >UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S464_9ACTO Length = 214 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%) Query: 8 PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67 G R+ R+++GL+ R A SGL+ +S +E+ S ++ L + K S+++FF Sbjct: 28 VGGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFF 87 Query: 68 SEPEKPDEPQV---------VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118 + V + + S + +++ + P+ L + PG Sbjct: 88 DAGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGG 147 Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172 H+GEE V+ GE++ + G ++ L G S + + +PH N + Sbjct: 148 RRENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDA 201 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 6/175 (3%) Query: 1 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60 MSDE + L EIR GLS RAAEL+G++ + + IE+ + SP I+TL K+ K + Sbjct: 1 MSDESITL--NLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58 Query: 61 LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120 L L+ E +P + +++K+V +P+ + +PG + Sbjct: 59 LPLTALIEESTRPSG---RSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSH 115 Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 G E VLEG + + +G L GQ + PH + + S G Sbjct: 116 ESLPHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170 >UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Frankia sp. EuI1c RepID=D1VIB7_9ACTO Length = 203 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 4/184 (2%) Query: 1 MSDE-GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59 MSD G A + R +GL+ A+ SG++ + IS +E+ + P + L KL Sbjct: 1 MSDTLGAALAATVRSARAARGLTVAGLADASGVSRAMISKVERAEAQPTAALLAKLSGAL 60 Query: 60 GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119 GL+LSE + E + L G S + V + L ++ G T Sbjct: 61 GLTLSELIARAESGPSRLTRHGEQPLWTDPDSGYSRRAVSPP-ASTGLELVQVELPAGAT 119 Query: 120 TGERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177 ++ VL G + + L G + + N + CR + Sbjct: 120 VAMPASTYRFIDQQIWVLAGRLRFVEGDDVHELGQGDCLQLGAPADCVYVNPTEAPCRYL 179 Query: 178 SAHT 181 A Sbjct: 180 VALY 183 >UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax=Idiomarina loihiensis RepID=Q5QYK8_IDILO Length = 191 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 6/187 (3%) Query: 1 MSDEGL-----APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL 55 M+D+ A KR+ R+Q G+S A+ + ++ + IE+ + +P+I L KL Sbjct: 1 MTDKDKTAINEAIAKRVYTFRKQYGMSLDELAKNAEISKGMLVQIEKGRANPSIGILCKL 60 Query: 56 LKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115 +S+++ + + P + G G +L+ + + + Sbjct: 61 ANALAVSVADIVAVSDDPKVTIRQPQDIPTLWNGDHGGVARLLAGSKGTIMIELWRWSMF 120 Query: 116 PGTTTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 P +G E+ V G + + +N + Y L AG S + H++ N++ Sbjct: 121 PKEQFVSEAHSKGTIELIHVEGGCLDVLVNEETYTLSAGDSMTAEMDVAHTYQNSTNEPV 180 Query: 175 RIISAHT 181 Sbjct: 181 HFTMTVY 187 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.163 0.477 Lambda K H 0.267 0.0492 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,307,696,235 Number of Sequences: 3077464 Number of extensions: 63687776 Number of successful extensions: 217822 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 15210 Number of HSP's successfully gapped in prelim test: 4856 Number of HSP's that attempted gapping in prelim test: 196765 Number of HSP's gapped (non-prelim): 20977 length of query: 185 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 64 effective length of database: 668,023,212 effective search space: 42753485568 effective search space used: 42753485568 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 90 (39.0 bits)