Phyre 2 alignment of Q5H775 with c2xxzA_

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Job Description | Q5H775
Confidence | 86.99% | Date | Thu Jan 5 12:37:19 GMT 2012
Rank | 264 | Aligned Residues | 39
% Identity | 23% | Template | c2xxzA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:lysine-specific demethylase 6b; | PDBTitle: crystal structure of the human jmjd3 jumonji domain
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | D | Y | H | L | V | A | G | Q | S | Y | A | I | N | T | G | I | P | H | S | F | S | N | T | S | A | G | I | C | R | I | I | S | A | H | T | P | T | T | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | R | F | V | Q | R | P | G | D | L | V | W | I | N | A | G | T | V | H | W | V | Q | A | T | G | . | W | C | N | N | I | A | W | N | V | G | P | L | T | A
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S | . | S |  |  |  |  |  |  |  |  |  | S |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1449 | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . | . | . | . | . | . | . | . | . | 1470 | . | . | . |  | . | . | . | . | . | . | 1480 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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