Phyre 2 alignment of Q5H775 with c1s7eA_

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Job Description | Q5H775
Confidence | 92.62% | Date | Thu Jan 5 12:37:19 GMT 2012
Rank | 218 | Aligned Residues | 36
% Identity | 11% | Template | c1s7eA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:hepatocyte nuclear factor 6; | PDBTitle: solution structure of hnf-6
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | P | G | K | R | L | S | E | I | R | Q | Q | Q | G | L | S | Q | R | R | A | A | E | L | . | S | G | L | T | H | S | A | I | S | T | I | E | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | V | A | Q | R | I | T | T | E | L | K | R | Y | S | I | P | Q | A | I | F | A | Q | R | V | L | C | R | S | Q | G | T | L | S | D | L | L | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  | S | S |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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