BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (185 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax...   379   e-104
UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi...   197   1e-49
UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin...   146   3e-34
UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI...   126   3e-28
UniRef50_Q1QCJ7 Cupin 2, conserved barrel n=1 Tax=Psychrobacter ...   117   2e-25
UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin...   115   6e-25
UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin...   115   9e-25
UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin...   114   1e-24
UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin...   112   6e-24
UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P...   112   7e-24
UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al...   110   2e-23
UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Mari...   110   2e-23
UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh...   106   3e-22
UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein...   100   3e-20
UniRef50_C5BTI6 DNA-binding protein n=1 Tax=Teredinibacter turne...    96   7e-19
UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De...    95   1e-18
UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax...    93   3e-18
UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni...    91   2e-17
UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti...    91   3e-17
UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B...    90   3e-17
UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella ...    90   4e-17
UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be...    86   5e-16
UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni...    83   5e-15
UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte...    82   7e-15
UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=...    82   9e-15
UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M...    82   1e-14
UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch...    82   1e-14
UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C...    81   1e-14
UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ...    80   3e-14
UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q...    79   5e-14
UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob...    79   5e-14
UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost...    79   8e-14
UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag...    79   1e-13
UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin...    78   1e-13
UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost...    77   2e-13
UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax...    77   2e-13
UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo...    77   3e-13
UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B...    77   3e-13
UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P...    77   3e-13
UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci...    76   5e-13
UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi...    76   5e-13
UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ...    75   7e-13
UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=...    75   1e-12
UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin...    75   1e-12
UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I1...    75   1e-12
UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea...    74   2e-12
UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum...    74   3e-12
UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni...    74   3e-12
UniRef50_B3PEW6 Aldehyde dehydrogenase n=1 Tax=Cellvibrio japoni...    74   3e-12
UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax...    74   3e-12
UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl...    73   4e-12
UniRef50_UPI00016AD0EC putative transcriptional regulator, XRE f...    73   4e-12
UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvima...    73   4e-12
UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th...    73   4e-12
UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De...    72   8e-12
UniRef50_C1DA81 Probable transcriptional regulator n=1 Tax=Larib...    72   1e-11
UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro...    72   1e-11
UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac...    72   1e-11
UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin...    72   1e-11
UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chlorofl...    71   2e-11
UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7...    71   2e-11
UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7...    71   2e-11
UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax...    70   3e-11
UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B...    70   3e-11
UniRef50_Q21KB3 Putative uncharacterized protein n=1 Tax=Sacchar...    70   3e-11
UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh...    70   4e-11
UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu...    70   4e-11
UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C...    69   5e-11
UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin...    69   6e-11
UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl...    69   6e-11
UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th...    69   6e-11
UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin...    69   8e-11
UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me...    69   1e-10
UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax...    68   1e-10
UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean...    68   1e-10
UniRef50_A8U412 Transcriptional regulator, XRE family with cupin...    68   1e-10
UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh...    67   3e-10
UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa...    66   7e-10
UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F...    65   8e-10
UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De...    65   1e-09
UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1...    65   1e-09
UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostri...    65   1e-09
UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein...    65   1e-09
UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De...    64   2e-09
UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid...    64   2e-09
UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ...    64   2e-09
UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re...    64   2e-09
UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph...    64   2e-09
UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob...    64   3e-09
UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga...    64   3e-09
UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar...    64   4e-09
UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin...    63   4e-09
UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin...    63   4e-09
UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax...    63   5e-09
UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost...    63   5e-09
UniRef50_C6E2Z8 Phosphate butyryltransferase n=2 Tax=Geobacter R...    63   6e-09
UniRef50_B9MNZ2 Transcriptional regulator, XRE family n=1 Tax=An...    62   7e-09
UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter...    62   7e-09
UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID...    62   8e-09
UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0...    62   8e-09
UniRef50_A0LTQ7 Transcriptional regulator, XRE family with cupin...    62   9e-09
UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=...    62   1e-08
UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F...    62   1e-08
UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin...    62   1e-08
UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo...    61   2e-08
UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax...    61   2e-08
UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi...    61   2e-08
UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri...    61   2e-08
UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin...    61   2e-08
UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria...    61   2e-08
UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R...    61   2e-08
UniRef50_B5JDI3 Helix-turn-helix domain protein n=1 Tax=Verrucom...    61   2e-08
UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa...    60   3e-08
UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jo...    60   3e-08
UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba...    60   4e-08
UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro...    60   4e-08
UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa...    60   4e-08
UniRef50_B5H6V8 Transcriptional regulator n=1 Tax=Streptomyces p...    60   5e-08
UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca...    59   6e-08
UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De...    59   6e-08
UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S...    59   7e-08
UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh...    59   1e-07
UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma...    58   1e-07
UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr...    58   1e-07
UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D...    58   1e-07
UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus...    58   2e-07
UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Maripro...    58   2e-07
UniRef50_B5YHQ3 Helix-turn-helix domain protein n=1 Tax=Thermode...    58   2e-07
UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=...    57   2e-07
UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=...    57   2e-07
UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De...    57   3e-07
UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin...    57   3e-07
UniRef50_Q2RLS1 Transcriptional regulator, XRE family n=1 Tax=Mo...    57   4e-07
UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1...    57   4e-07
UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu...    57   4e-07
UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re...    57   4e-07
UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De...    57   4e-07
UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord...    56   5e-07
UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi...    56   5e-07
UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B...    56   5e-07
UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax...    56   5e-07
UniRef50_D2S780 Transcriptional regulator, XRE family n=2 Tax=Ba...    56   6e-07
UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo...    56   6e-07
UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh...    56   6e-07
UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi...    56   7e-07
UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ...    56   7e-07
UniRef50_A8LCT7 Transcriptional regulator, XRE family n=22 Tax=A...    56   7e-07
UniRef50_UPI0001B4F46F transcriptional regulator n=1 Tax=Strepto...    55   8e-07
UniRef50_A4F638 Transcriptional regulator, Cro/CI family n=1 Tax...    55   9e-07
UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid...    55   9e-07
UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot...    55   9e-07
UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus D...    55   1e-06
UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge...    55   1e-06
UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do...    55   1e-06
UniRef50_C9XPQ5 Putative transcriptional regulator (Putative unc...    55   1e-06
UniRef50_D1PQA9 Toxin-antitoxin system, antitoxin component, Xre...    55   2e-06
UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin...    55   2e-06
UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin...    54   2e-06
UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac...    54   2e-06
UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me...    54   2e-06
UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De...    54   2e-06
UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Th...    54   2e-06
UniRef50_C7Q0I6 Transcriptional regulator, XRE family n=1 Tax=Ca...    54   2e-06
UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro...    54   2e-06
UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin...    54   2e-06
UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ...    54   2e-06
UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba...    54   2e-06
UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc...    54   2e-06
UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammapr...    54   3e-06
UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th...    54   3e-06
UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=De...    54   3e-06
UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=De...    54   3e-06
UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Fla...    54   3e-06
UniRef50_Q9RVJ9 Epoxidase, putative n=1 Tax=Deinococcus radiodur...    53   4e-06
UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=F...    53   4e-06
UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill...    53   4e-06
UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde...    53   4e-06
UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=...    53   4e-06
UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri...    53   5e-06
UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R...    53   6e-06
UniRef50_B9MNH1 Transcriptional regulator, XRE family n=1 Tax=An...    53   6e-06
UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 ...    52   6e-06
UniRef50_UPI0001C376DB transcriptional regulator, XRE family pro...    52   7e-06
UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator...    52   7e-06
UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh...    52   7e-06
UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl...    52   7e-06
UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Pa...    52   8e-06
UniRef50_Q2CGQ2 Probable transcriptional regulator n=1 Tax=Ocean...    52   9e-06
UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n...    52   9e-06
UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax...    52   1e-05
UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin...    52   1e-05
UniRef50_A4J2V8 Helix-turn-helix domain protein n=3 Tax=Desulfot...    52   1e-05
UniRef50_A4J2X4 Putative transcriptional regulator, XRE family n...    52   1e-05
UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi...    52   1e-05
UniRef50_D1C7G3 Putative uncharacterized protein n=1 Tax=Sphaero...    52   1e-05
UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy...    52   1e-05
UniRef50_C9XR68 Putative phage DNA-binding protein n=6 Tax=Clost...    52   1e-05
UniRef50_Q2RI10 Transcriptional regulator, XRE family n=1 Tax=Mo...    51   2e-05
UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coproco...    51   2e-05
UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin...    51   2e-05
UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B...    51   2e-05
UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp...    51   2e-05
UniRef50_B9MNH2 Transcriptional regulator, XRE family n=1 Tax=An...    51   2e-05
UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B...    50   3e-05
UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac...    50   3e-05
UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=...    50   3e-05
UniRef50_A5V678 Transcriptional regulator, XRE family n=1 Tax=Sp...    50   3e-05
UniRef50_D2BA96 Putative transcriptional regulator, XRE family n...    50   3e-05
UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseud...    50   3e-05
UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco...    50   3e-05
UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0...    50   3e-05
UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang...    50   3e-05
UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=De...    50   3e-05
UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri...    50   4e-05
UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin...    50   4e-05
UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre...    50   4e-05
UniRef50_A4XJD0 Transcriptional regulator, XRE family n=1 Tax=Ca...    50   4e-05
UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Ac...    50   4e-05
UniRef50_C5CT85 Transcriptional regulator, XRE family n=1 Tax=Va...    50   4e-05
UniRef50_Q0K2B1 Putative uncharacterized protein h16_B1072 n=1 T...    50   5e-05
UniRef50_C6WEH6 Cupin 2 conserved barrel domain protein n=3 Tax=...    50   5e-05
UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Ga...    50   5e-05
UniRef50_Q1AYH0 Transcriptional regulator, XRE family n=1 Tax=Ru...    50   5e-05
UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B...    50   5e-05
UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Ta...    50   5e-05
UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba...    49   5e-05
UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=...    49   6e-05
UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin...    49   7e-05
UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=...    49   9e-05
UniRef50_Q1GEM6 Transcriptional regulator, XRE family with cupin...    49   9e-05
UniRef50_A7K1Q3 Predicted transcriptional regulator n=1 Tax=Vibr...    49   1e-04
UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My...    49   1e-04
UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin...    49   1e-04
UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=B...    49   1e-04
UniRef50_A7AYS6 Putative uncharacterized protein n=2 Tax=Ruminoc...    49   1e-04
UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1...    48   1e-04
UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a...    48   1e-04
UniRef50_C1TKU3 SOS response transcriptional repressor, RecA-med...    48   1e-04
UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S...    48   1e-04
UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac...    48   1e-04
UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B...    48   1e-04
UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein...    48   1e-04
UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales ...    48   2e-04
UniRef50_C7LUL3 Helix-turn-helix domain protein n=1 Tax=Desulfom...    48   2e-04
UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat...    48   2e-04
UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A...    48   2e-04
UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba...    48   2e-04
UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ...    48   2e-04
UniRef50_D1WPC0 DNA-binding protein n=1 Tax=Staphylococcus epide...    48   2e-04
UniRef50_B9MPV1 Transcriptional regulator, XRE family n=2 Tax=Cl...    48   2e-04

>UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67
           Tax=Gammaproteobacteria RepID=PUUR_ECOLI
          Length = 185

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/185 (100%), Positives = 185/185 (100%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
Sbjct: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
Sbjct: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180

Query: 181 TPTTF 185
           TPTTF
Sbjct: 181 TPTTF 185


>UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio
           RepID=A6CYI2_9VIBR
          Length = 185

 Score =  197 bits (502), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK ++++R+++GLSQR  AE +G+THSAIS+IE  KVSP++S+LQK++ V+ LSLSEFF+
Sbjct: 7   GKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSLSEFFT 66

Query: 69  -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126
            E ++  E +VV+  +DLIE+GS+ VSMKLV+NG+  + +  + E Y P +TTG   IKH
Sbjct: 67  LEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGASNIKH 126

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE+GTVL GE+ L  NG+ Y + AG+SY I+T IPH F+N S   CR+ISAHTP  F
Sbjct: 127 EGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHTPKAF 185


>UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132
           Tax=Proteobacteria RepID=A0KZV5_SHESA
          Length = 208

 Score =  146 bits (369), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L  +R+ +GLSQR  A+ +G+T+S IS IE++ VSP++S+L+K+L    +SL +FFS
Sbjct: 30  GASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLVDFFS 89

Query: 69  -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-IKH 126
            E     E +VV   D+L+++G+  +  KL+    PNR ++++ ETY PG+ TGE  +KH
Sbjct: 90  IEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEEMLKH 149

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE   V+EG+  LT+  + Y L AG SY  N+ +PH F N     CR++SA TP  F
Sbjct: 150 EGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTPANF 208


>UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14
          Length = 203

 Score =  126 bits (317), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 2/179 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R+   LSQR  A  SG+T++ IS IEQ++VSP+IS+L+KLL+   ++L++FF+
Sbjct: 25  GARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLADFFT 84

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER--IKH 126
             + P + Q V    D  ++G  GV + LV    P+R +  + E Y PG  +GE   +  
Sbjct: 85  FDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPIVHS 144

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE G V  G + LTI+GQ   L  G  Y   T +PH F N       IIS++TP  F
Sbjct: 145 EGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPANF 203


>UniRef50_Q1QCJ7 Cupin 2, conserved barrel n=1 Tax=Psychrobacter cryohalolentis K5
           RepID=Q1QCJ7_PSYCK
          Length = 132

 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 2/128 (1%)

Query: 60  GLSLSEFFSEPEKPDEPQVVINQDDLIEMG--SQGVSMKLVHNGNPNRTLAMIFETYQPG 117
            L L+ FFS+  K  + +VV+   DLIE+   S  VS+K V+N +  + L  + ETYQP 
Sbjct: 5   ALYLTTFFSDEWKEPKARVVVTPKDLIELSEPSSRVSLKQVYNCSTTKNLGFLIETYQPN 64

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           ++T E+I H+GEEIGTV+EG++++ I    Y L    SY I+T  PH+F N + G+ RII
Sbjct: 65  SSTEEKIAHEGEEIGTVIEGKVLIRIEETTYLLNEDDSYVIDTIKPHTFINPTDGVTRII 124

Query: 178 SAHTPTTF 185
           SAHTPTT+
Sbjct: 125 SAHTPTTY 132


>UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1
           Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR
          Length = 182

 Score =  115 bits (289), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 4/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R   +R++ GLSQR  A+ +G+T+  IS IE + VSP++++L KLL     S++EFF+
Sbjct: 6   GPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEFFA 65

Query: 69  EPE-KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126
             E KPD  Q    +    E+G   +S + + + + +R + M+ ET  PG  TG E + H
Sbjct: 66  VDEPKPD--QFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLAH 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +G+E G +++GE+ LT++ +   L  G SY  ++   H F NTS   C I+SA++P +F
Sbjct: 124 EGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182


>UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin sensor domain n=1
           Tax=Sagittula stellata E-37 RepID=A3JX32_9RHOB
          Length = 174

 Score =  115 bits (287), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 9/174 (5%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           +SQR  A  +GLT SAIS IEQ+K SP++++L++LL    ++LSEFFS  E+   P+   
Sbjct: 1   MSQRDLAGRAGLTSSAISLIEQNKSSPSVASLKRLLDAIPMNLSEFFSVVEQRKTPKYFY 60

Query: 81  NQDDLIEMGSQGVSM-------KLVHNGNPNR-TLAMIFETYQPGTTTG-ERIKHQGEEI 131
             D+ IE+  Q + +        L   G+ +R +L ++ ETY  G+ TG E ++H+GEE 
Sbjct: 61  APDEYIELSPQDIGLGVGAARVSLRQLGDASRHSLQVLHETYPAGSDTGPELLRHEGEEA 120

Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           G V+ G I +T+  Q   L  G  Y  ++ +PH F N S   C +ISA TP TF
Sbjct: 121 GIVVSGLIEVTVADQIRVLNPGDGYLFSSQLPHRFRNISDAPCVVISACTPPTF 174


>UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=Q1GM81_SILST
          Length = 190

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 6/186 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +DE L P  RL  +R++  LSQR  A+ +G+ +S IS IE  K++P++  L+++L    +
Sbjct: 9   ADEDLGP--RLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPI 66

Query: 62  SLSEFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           SLS+FF+ EPE   E       +DL E+G   VS+K V      R + +++ETY+ G  T
Sbjct: 67  SLSDFFAFEPET--EKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADT 124

Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G  +  H+GEE G VL G I +T+  Q   L  G +Y  ++  PH F       C ++SA
Sbjct: 125 GRVMYGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSA 184

Query: 180 HTPTTF 185
            TP TF
Sbjct: 185 CTPPTF 190


>UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=C3MAN4_RHISN
          Length = 220

 Score =  112 bits (280), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 4/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R    LSQR  A+ +G+T+S IS IE +  +P++  L+++L    + L+EFFS
Sbjct: 44  GNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLAEFFS 103

Query: 69  -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKH 126
            EPE+P   +     ++L+E+G   +S + + +    R+L ++ E YQPG  TG+  + H
Sbjct: 104 FEPERPR--KAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVLLVH 161

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE G VL G + +T++ +   L  G +Y   +  PH F       C +ISA TP TF
Sbjct: 162 EGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPPTF 220


>UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria
           RepID=B1M0W6_METRJ
          Length = 186

 Score =  112 bits (280), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 8/183 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R + GLSQR  A+ +G+T+SAIS IE ++V+P++  L+++L    + ++EFF+
Sbjct: 6   GARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMAEFFA 65

Query: 69  -EPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTGE- 122
            EPE   E +     ++L E+G +     +S + V +    R L ++ E Y+PG  TG  
Sbjct: 66  LEPEP--ERKAFFAAEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADTGRV 123

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            + H+GEE G VL G + +T++ +   L  G +Y+ ++  PH F       C ++SA TP
Sbjct: 124 PLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSACTP 183

Query: 183 TTF 185
            +F
Sbjct: 184 PSF 186


>UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria
           RepID=A1BAD5_PARDP
          Length = 213

 Score =  110 bits (276), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 11/184 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL E+R    +SQR+ AE SG+ H  +S IE  + SP++++L+K+L   G+++SEFF 
Sbjct: 28  GARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLGVTMSEFF- 86

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVS--------MKLVHNGNPN-RTLAMIFETYQPGTT 119
           EP+ P  PQ      +L ++ S+  S        M L   G+     L ++ E Y+PG  
Sbjct: 87  EPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHERYEPGAD 146

Query: 120 TGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           TGE  + H G E G V+ GEI LT+  Q   L AG SY   +  PH F N S     ++S
Sbjct: 147 TGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVSDREAVVVS 206

Query: 179 AHTP 182
           A TP
Sbjct: 207 ACTP 210


>UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y8G1_9GAMM
          Length = 184

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 107/178 (60%), Gaps = 3/178 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL  IR+ +GLSQR  A+ +G+T+SAIS IE ++VSP++S+L+K+L   G+SL+EFFS
Sbjct: 4   GERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSLTEFFS 63

Query: 69  EPEKPD-EPQVVINQDDLIEMGSQGVSMKLV-HNGNPNRTLAMIFETYQPGTTTGERIKH 126
             +K   + QVV   D+L+++    V+ KLV  +    R++ +  +TY   +    +   
Sbjct: 64  IKQKDKLDYQVVYRSDELLDVSLDEVTTKLVGKHFLKERSMGLTLQTYPVASRAEVKATS 123

Query: 127 Q-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           Q  E+ G V++GE+ L I G+ + LVAG S+   +   H F N   G   ++S  T T
Sbjct: 124 QISEKAGYVIKGEMTLEIQGEVHPLVAGDSFYFESHFAHRFINQGRGEALLLSVQTVT 181


>UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae
           RepID=A6UA69_SINMW
          Length = 182

 Score =  106 bits (265), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%)

Query: 24  RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83
           R  A  SG++HS IS IE+D++SP+I TL  +L   G +L  FFS+ +         +  
Sbjct: 20  RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79

Query: 84  DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142
           DLIE+G    +S +++   +PNR + M+ E Y  G  TGE   H  +E G VL G + +T
Sbjct: 80  DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139

Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +  Q   L  G  Y  ++ +PH F N   G   ++SA TP T+
Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182


>UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein n=1 Tax=Reinekea
           blandensis MED297 RepID=A4BG67_9GAMM
          Length = 181

 Score =  100 bits (248), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 4/163 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKRL E+R++ G+SQR  A+  G+T+S IS IE++ VSP++S+LQK+L    ++L EFF 
Sbjct: 4   GKRLQEVRKKAGISQRELAKRVGVTNSTISMIEKNNVSPSVSSLQKVLSGMSMTLLEFF- 62

Query: 69  EPEKPD--EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125
           E E  D   PQ+    DD  ++ S  V  +L+    PNR L  + ET+ PG     R+  
Sbjct: 63  EAEDNDIYVPQINYTDDDFQDVSSSQVRRRLLGQYFPNRKLEFVSETFPPGAERRIRLGV 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
             G++ G V+ G++VL +  +   L  G  +   +   H F N
Sbjct: 123 ESGDKAGMVISGQLVLILGERTVVLEPGNGFYFESSDVHFFRN 165


>UniRef50_C5BTI6 DNA-binding protein n=1 Tax=Teredinibacter turnerae T7901
           RepID=C5BTI6_TERTT
          Length = 200

 Score = 95.5 bits (236), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 101/174 (58%), Gaps = 8/174 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL  +R+Q GLSQR  A  + +T+S +S IEQ KVSP++++L+K+L    ++L EFFS
Sbjct: 23  GERLQAVRKQHGLSQRELARRAEVTNSTLSMIEQGKVSPSVASLEKVLSAIPMTLQEFFS 82

Query: 69  EPEKPDEPQVVINQDDLIEM---GSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERI 124
           +  +   P  +    D + +   G++ + M L   G+    L+   +TY PG+  + E +
Sbjct: 83  DTLEILPP--IYRAADFLSIRKDGTENLIMPLPEAGHDGVYLSR--QTYSPGSQISTEWM 138

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             +G   G V+EGE+VL ++G +Y L  G+ +  +    HS +N SA  C +I+
Sbjct: 139 IRKGFVGGIVVEGELVLRLDGNEYQLGVGEGFHFSLHRSHSLANQSAHDCVVIT 192


>UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales
           RepID=Q3A2S3_PELCD
          Length = 188

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 5/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L  +R    L+Q      + LT   IS +E D   P+I+TL+ +L V+G+S+ EFF+
Sbjct: 8   GEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVSMQEFFT 67

Query: 69  EPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           +P    + +VV   D  ++  + G  + ++L+  G  NR +     T +PG    E+  H
Sbjct: 68  DPV---DTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEMEEQDFH 124

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE G VL G I + ++ + Y +   + +   +   HS  N   G  RI+   TP TF
Sbjct: 125 EGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVVTPPTF 183


>UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae
           RepID=A5IJD1_THEP1
          Length = 188

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 5/163 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L ++R  +GL+Q   AE + L+ S IS +E DK SP+I TL+++L+  G  L  FFS
Sbjct: 16  GEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKHFFS 75

Query: 69  EPEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           + E   E +VV  +++ + +    +GV  +++ +G  ++ +  I  T +PG  T E   H
Sbjct: 76  DVE---EERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESYH 132

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT 169
           +G E G V++G I L ++ + Y L  G  +       H   N+
Sbjct: 133 EGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNS 175


>UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SMM2_9BACT
          Length = 182

 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 4/180 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK + E+R +  ++ R  A+ SG + S +S +E+D +SP +++L+K+    G++++ FFS
Sbjct: 4   GKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITSFFS 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125
             +  +   +V+ +D  + +GS+   V  + + +   N  L  ++     G  +G+    
Sbjct: 64  -GDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDYNI 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H GEE   V++G++ +T++G+   L  G S   N+ +PH + NT  G   ++  +TP TF
Sbjct: 123 HLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPPTF 182


>UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans
           SI85-9A1 RepID=Q1YMV2_MOBAS
          Length = 193

 Score = 90.5 bits (223), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 10/184 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L  +R    LS ++ A   G + S +S +E  +V+P ++ L+KL+   G++++ F  
Sbjct: 13  GRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGINIA-FLF 71

Query: 69  EPEKPDEPQVVIN---QDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           EP+  DE   +++   +  +I +G      G+ ++ +    P   L        PG +T 
Sbjct: 72  EPQ--DEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPGGSTD 129

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H GEEIG VLEG   LT+ G  + L  G S+A  +  PH + N    + R++  +T
Sbjct: 130 GAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVLWVNT 189

Query: 182 PTTF 185
           P TF
Sbjct: 190 PPTF 193


>UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria
           RepID=Q1IRF9_ACIBL
          Length = 292

 Score = 90.1 bits (222), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 15/183 (8%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R  +GLS  + AE  G++   +S IE+  +S +++TL+KL K Y L++ + F 
Sbjct: 119 GLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDLF- 177

Query: 69  EPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTTG-E 122
             ++    Q ++   +  ++  S GV M+L+  GNP      + E +     PG  +G E
Sbjct: 178 --DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP------VMEPHLFHVAPGAGSGDE 229

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H+GEE   VL G + L ++G++Y L  G S+   +  PH +SNT +    ++  +TP
Sbjct: 230 EYSHEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTP 289

Query: 183 TTF 185
            TF
Sbjct: 290 PTF 292


>UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella bronchiseptica
           RepID=Q7WMB8_BORBR
          Length = 172

 Score = 90.1 bits (222), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           +  +R     SQR  A  +G+TH+ ++ IE+ ++ P++ TL+ LL   G+S+ +FF    
Sbjct: 1   MQALRVSLSFSQRELARRAGVTHTTVAAIEKGRIDPSLGTLKSLLAACGVSMGDFF---- 56

Query: 72  KPDEPQVVINQDDLIE-MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-IKHQGE 129
           + D  +  + +   I  + + GV M+ V    P + L +  E Y  G  TG++ ++H+G+
Sbjct: 57  RSDRVESAVTEKHKISTVSTGGVHMRYVAPAQPGKLLQLTQELYDVGADTGQKPLRHEGQ 116

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E G V+ G   L +  + + L  G SY  ++  PH   N       II+A +P +F
Sbjct: 117 EGGIVIRGTFELQLGDERHILKPGDSYYFDSTTPHRIRNIGEEEGEIINAASPPSF 172


>UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae
           DSM 12333 RepID=C5BVJ0_BEUC1
          Length = 201

 Score = 86.3 bits (212), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 5/178 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL ++R+Q GL+ R  A  +GL+ + +S IE  +  P+I++L+KL + +   ++  F 
Sbjct: 26  GDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLFH 85

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGERIK-H 126
           E   PD P V I++     + S    +       P R  L ++     PG  + E  + H
Sbjct: 86  E---PDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGDLEVLRSVLAPGDVSAEGPRGH 142

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
              E   VL GE+V+TI   D+ LVAG++   ++  PH + N SA    I+   TP T
Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200


>UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SJP6_9BACT
          Length = 178

 Score = 82.8 bits (203), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G +L EIR++  ++    ++ +G T S IS IE  K SP+I++L+K+    G ++SE
Sbjct: 1   MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60

Query: 66  FFSEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTGE 122
            F      DE  +V   +  D     ++ +SM  + +   NR +  I     P G T  +
Sbjct: 61  LFE-----DERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTD 115

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H GEE+G V+EG+I + I   +++L  G+    ++ +PH   N +          TP
Sbjct: 116 YYHHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTP 175

Query: 183 TTF 185
            +F
Sbjct: 176 PSF 178


>UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae
           RepID=Q5LWB9_SILPO
          Length = 193

 Score = 82.4 bits (202), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 9/183 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ E+R+ +GL+ ++ A  +GL+   +S +E+    P++  L  +    G+ ++ FF 
Sbjct: 14  GTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWFFP 73

Query: 69  EPEKPDEPQ--VVINQDDLIEMG-SQGVSMKLVHNGNPNRT--LAMIFETYQPGTTTG-E 122
           +P+   +P+  +V+  D    +  S GV  +L+   +PN +  L +I  T+ PG  +G E
Sbjct: 74  DPDTVSDPEADLVVRADRRRTLRFSSGVRDELI---SPNLSGQLELIVTTFDPGAGSGAE 130

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H+GEE G ++EG++ +T+  +   L  G +    + IPH + N   G   +I A TP
Sbjct: 131 LYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTP 190

Query: 183 TTF 185
             +
Sbjct: 191 PYY 193


>UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM
          Length = 183

 Score = 82.0 bits (201), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 8/186 (4%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E +  GK++ + R + G+S R  A+ SGLT S +S IE+D V+P+I TL+ + +   + +
Sbjct: 2   EDINLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALDVPM 61

Query: 64  SEFFSEPEKPDEPQV--VINQDDLIEMGSQGVSMKL-VHNGNPNRTLAMIFETYQPGTTT 120
            +FF    K DEPQV  ++ + +   +G     +   +   +   ++     +  PG T+
Sbjct: 62  FKFF----KDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGSIEFCMMSIPPGLTS 117

Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G   + H GEE+  V+ G + + + G  Y L  G S  I     H + N    + ++I A
Sbjct: 118 GRNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFA 177

Query: 180 HTPTTF 185
            TP +F
Sbjct: 178 ITPPSF 183


>UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA
          Length = 178

 Score = 82.0 bits (201), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK++ ++R+++G+S +  AE +GLT S +S +E+D   P+I++L+K+ +   + +  F  
Sbjct: 3   GKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFLL 62

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQ 127
            PE    P V  +Q  ++      ++ +L+ + + NR + ++    +PG  +  E + H 
Sbjct: 63  NPED-HSPVVRKDQRKVLRFPQSHLTYELL-SPDLNRNMEVMMARLEPGAASCDEPLAHP 120

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE   VL+G + + I G+ + +  G S      IPH   +        ISA TP  F
Sbjct: 121 GEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178


>UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus
           RepID=B8G9C1_CHLAD
          Length = 211

 Score = 81.6 bits (200), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 2/161 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKRL  +R++Q +S R  AE SGL  + +S IE  + SP++STLQ+L     + +S FF+
Sbjct: 23  GKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISAFFT 82

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQ 127
            PE P +  V       I       ++  +  G  NRTL  +  T  PG  +G E I H 
Sbjct: 83  -PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAIIHT 141

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           G+E    + G+I+ T+  Q Y +  G S      +PH + N
Sbjct: 142 GQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHN 182


>UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA
          Length = 185

 Score = 81.3 bits (199), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 3/185 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D+ +  G  +  IR ++GL  +  AE   ++ S +S IE+   +P+++T++ + +   + 
Sbjct: 2   DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN--RTLAMIFETYQPGTTT 120
           L +FF EPEK D    ++ ++D   + ++ +  +L+    P     + M F T +   T+
Sbjct: 62  LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTNIECMKMTF-TEKNAETS 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H+GEE+  +L G++ +TI  Q   +  G S  I    PH ++N +AG   ++ + 
Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180

Query: 181 TPTTF 185
           TP  F
Sbjct: 181 TPPEF 185


>UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN
          Length = 185

 Score = 80.5 bits (197), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L ++R ++GL+Q   A    L+   IS +E+D  SP+I+TL  +L+  G +L +FF+
Sbjct: 10  GEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNLKDFFN 69

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMK---LVHNGNPNRTLAMIFETYQPGTTTGERIK 125
             E   E ++V +++D+ E     ++     ++ N   N  +  I  T +P         
Sbjct: 70  NDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKN-MMEPILVTLEPNGQYKNDEP 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G VL G + + +  + Y    G+S+       H  SN    + +++   TP  F
Sbjct: 126 HEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVSTPPYF 185


>UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5
          Length = 208

 Score = 79.3 bits (194), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 2/179 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+  +R+++GL+    A+ S LT   IS +E++   P+I  L  + +  G+++  FF+
Sbjct: 30  GTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFA 89

Query: 69  EPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
              +  P++   V+ +   +++  +   +  +    P R L  +   + PGT + E   H
Sbjct: 90  SETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYSH 149

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE G VL G   L +  + + L  G S++ ++  PH + N       ++   TP TF
Sbjct: 150 EGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208


>UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JLN2_AGRRK
          Length = 205

 Score = 79.3 bits (194), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL   RQ  G++ +  A  +  + S +S IE  K SP++  L +L++V G ++   F 
Sbjct: 25  GTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWMFE 84

Query: 69  EPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           E +  +          LI +      +G+S++ +   +P   L       +PG  +   I
Sbjct: 85  EADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAGPI 144

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H GEE+G +L G I L +  + + L  G S+   + +PH + N       I   +TP T
Sbjct: 145 QHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTPAT 204

Query: 185 F 185
           F
Sbjct: 205 F 205


>UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile
           RepID=Q186J9_CLOD6
          Length = 187

 Score = 79.0 bits (193), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++  +R+ + +S    A+ S L+   IS IE++ V P+I  + K+ K   +++  FF 
Sbjct: 9   GSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALDINIGYFFE 68

Query: 69  EPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERIK 125
           E  + D   VV   N+  ++   S      LV N +  + +  I  T    T    E + 
Sbjct: 69  EIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLS-GKKIEFILVTLDGHTHKNSEFVT 127

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G +++G++ +T+  ++Y L  G S+  N+ IPH + N    +C  + A TP +F
Sbjct: 128 HEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVWAMTPPSF 187


>UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna
           RepID=C2HHC8_PEPMA
          Length = 179

 Score = 78.6 bits (192), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +R + GL+Q   AE S LT   IS +E+D  SP++ +L  LL   G  ++ FF 
Sbjct: 4   GEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMATFFM 63

Query: 69  EPEKPDEPQV--VINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTTG 121
                D+P V  +  +DD     S+ +SM      LV     N    +I    Q G T  
Sbjct: 64  -----DKPSVKEIFTKDDY--QSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETK- 115

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E    +GEE G VLEG   + ++ + Y L  G  +           N    IC++I   +
Sbjct: 116 EYNPFEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMS 175

Query: 182 PTTF 185
           P  F
Sbjct: 176 PPNF 179


>UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Clostridiales RepID=A3DDF7_CLOTH
          Length = 179

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 5/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++ ++R    ++Q   A+ + L+   IS IE D  SP+I+TL  +L+  G  L  FFS
Sbjct: 4   GAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKTFFS 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGV--SMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           + E   + Q+V  + D        +  +++ V   +    +  I  T QPG  + E   H
Sbjct: 64  DSE---DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLEDHPH 120

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEE G V++G I + I  + Y +  G+S+   +   H   N      ++I   TP TF
Sbjct: 121 EGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPPTF 179


>UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile
           RepID=C9XR14_CLODC
          Length = 181

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 102/184 (55%), Gaps = 11/184 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D  L  G++++E+R++Q LS R  A+L+ +T S +S IE+   +P++++L+ +     
Sbjct: 1   MNDLNL--GEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDD---LIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQP 116
           + L  FF    + D+  +++  D+   +I  GS+ V  + L+ + + N   A++     P
Sbjct: 59  VPLFTFFVS--EVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIM--DLAP 114

Query: 117 GTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
            T++  +RI H G+EI  VLEGE+ L ++  ++ L  G S  +  G  H + N S    +
Sbjct: 115 NTSSCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESK 174

Query: 176 IISA 179
           +I A
Sbjct: 175 VIFA 178


>UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales
           RepID=UPI0001B554B1
          Length = 210

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RLS +R + GL+    A  +G++   +S IE+   +P+ +TL KL     + +  FF 
Sbjct: 32  GRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFFD 91

Query: 69  EPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
             E   EP  V+       + +  +G+  +L+      R L M+     PG +      +
Sbjct: 92  GSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPHR 150

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE+  +LEG + +T+ G++  L AG +   +  +PH F N       I+ A TP +F
Sbjct: 151 HEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPSF 210


>UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens
           ISM RepID=A3SMM9_9RHOB
          Length = 219

 Score = 77.0 bits (188), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D GL  G+ +  +R+ + L+    AE +GL+   IS IE+ +  P+++ L ++ +  G+S
Sbjct: 25  DPGL--GEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALGVS 82

Query: 63  LSEFFSEPEKPD--------------EPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTL 107
           +S FF  PE PD              +  +++ + +   +    G+  +L+  G   + L
Sbjct: 83  VSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK-L 141

Query: 108 AMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167
            ++   + PG+       H+GEE G VL G + L +    + L AG S+A ++  PH + 
Sbjct: 142 ELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHRYR 201

Query: 168 NTSAGICRIISAHTPTTF 185
           N S     +I A TP +F
Sbjct: 202 NPSETETIVIWALTPPSF 219


>UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2
          Length = 184

 Score = 77.0 bits (188), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 3/179 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++   R+  GL+ +R AEL+ +T S +S IE+   +P++ TL+ +     + L  FF 
Sbjct: 7   GQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALNIPLFNFFL 66

Query: 69  EPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126
           E    +E  V  NQ   I     G VS +L+ + N + +L +      P T +  E + H
Sbjct: 67  EDTSTEELVVRANQRKKITFPESGNVSYELL-SPNLDGSLELALMNLLPQTASSMEPVAH 125

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +GEEI  ++EG++ L +N +   L  G S  I     H + NTS     +I   TP +F
Sbjct: 126 KGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFGVTPPSF 184


>UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria
           RepID=B2JW16_BURP8
          Length = 234

 Score = 76.6 bits (187), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           EGL  G RL   R  Q L+ +  AE +G + S +S +E    +P+++TL ++      ++
Sbjct: 43  EGL--GTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNI 100

Query: 64  SEFFSEPEKPDEP-QVVINQDDLIEMGSQ-----------GVSMKLVHNGNPNRTLAMIF 111
           +   S P     P Q    +  +   G+Q            + ++ +    P + L    
Sbjct: 101 AALVSGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDI 160

Query: 112 ETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
              +P   + E+I H GEE+G VLEGE+ LT+  + Y L AG S+   +  PHS+ N   
Sbjct: 161 HVLEPLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGD 220

Query: 172 GICRIISAHTPTTF 185
            I R++  +TP TF
Sbjct: 221 VITRVLWINTPPTF 234


>UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45
           RepID=D0D911_9RHOB
          Length = 205

 Score = 76.3 bits (186), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 8/163 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R+  GLS +  +  + L+  ++S IE+D  SP++ TL KL   + + LS FF+
Sbjct: 26  GLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLATSFDVPLSYFFA 85

Query: 69  EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRT--LAMIFETYQPGTTTG-ER 123
           +P   +   +VI +D   EM   +QG+   L+    P     L ++     P +++G E 
Sbjct: 86  DPAADEVDGIVIRRDTGHEMDVSAQGIRKHLL---TPKALDGLQLMMVRMTPESSSGPEA 142

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
             H+G + G VL G + L + G+ Y L  G S+   +  PH F
Sbjct: 143 YGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRF 185


>UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2QWJ8_9PLAN
          Length = 183

 Score = 76.3 bits (186), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 7/176 (3%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           +R+ E+R   GL+    AE +G+T   IS IE  +V+P++ TL K+ + +G+S ++  + 
Sbjct: 8   QRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTADLLAG 67

Query: 70  PEKPDEPQ-VVINQDDLIEMGSQGVSMK---LVHNGNPNRTLAMIFETYQPGTTTGERIK 125
            ++   PQ VV+ +++  E+   G +++   L H         M+ E  QPG    E++ 
Sbjct: 68  LDQ--RPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEI-QPGKGRDEKLA 124

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           H+GEE   V++G I      + Y L  G     +  + H+  N    I R+I  + 
Sbjct: 125 HEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVYA 180


>UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium
           sp. ORS278 RepID=A4YW73_BRASO
          Length = 184

 Score = 75.5 bits (184), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G RL   R  +G+  R  A++ G   S IS IE  KV P++  L K++      ++ FF 
Sbjct: 4   GPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMASFFG 63

Query: 68  ------SEPEKP-DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
                  + +KP D  +V +   D +  G   V  +LV     N   A I     PG   
Sbjct: 64  LRVDDYKQVQKPEDRMKVYV---DALRGGKGVVYERLVPVAAGNLLEANI-HVVAPGGEK 119

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            + I HQGE +G ++ G I LTI+   Y + AG S+     + +S+ N      RI+  +
Sbjct: 120 IDLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWVN 179

Query: 181 TP 182
           TP
Sbjct: 180 TP 181


>UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1
          Length = 236

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +++ G+A G ++  +RQ+   +    A  +G++   +S +E+   SP+I++L  +    G
Sbjct: 53  LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           +++  F    E P E + V   D L              + N    R L  I     PG 
Sbjct: 113 VTVQYFV---ETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQ 169

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E   H GEE   V+EGE+ LT+ G+ + L AG S    + +PHS+ NT+     ++ 
Sbjct: 170 KRSEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVW 229

Query: 179 AHTPTTF 185
             TP  F
Sbjct: 230 VGTPRLF 236


>UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1
           Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB
          Length = 204

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 13/181 (7%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G+   ++RQ QG+S R  +E SG++   IS IE+D  +P++  L  + +   + +   
Sbjct: 15  AIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNVPMQVM 74

Query: 67  F-------SEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
           F       ++ +   +P  +    +   I++GS  +  +L+ +G  N  L ++  T +PG
Sbjct: 75  FGDDSGTTADSDADGDPPFLRRAAKRPRIDLGS--LHKELLTSGG-NHNLQIMILTIEPG 131

Query: 118 TTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
            T+G   + +  E+ G VLEGE++L+++ ++ HL  G S+  ++  PH+F N      RI
Sbjct: 132 GTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRPARI 191

Query: 177 I 177
           +
Sbjct: 192 L 192


>UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I178_CLOBH
          Length = 177

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 7/163 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++   R+++GL+ +  +EL+ L+   IS +E+D  SP++S LQ++ +V G++L E   
Sbjct: 4   GEKIKYYRKKKGLTIKELSELTNLSIGFISNLERDLNSPSVSNLQQICEVLGINLMEILK 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN-RTLAMIFE--TYQPGTTTGERIK 125
             E  +      ++ ++     + +  +++ NGN N   +A+  E  T    T+ G    
Sbjct: 64  STEDKEYIVCKDSRSEIFSTDDKKIKFEMLTNGNKNLNAIAITIEGNTDYNDTSWG---- 119

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           H  +E+G V++G + + +N Q Y L  G S  +N   PH + N
Sbjct: 120 HSYDELGIVVKGTLEIQMNSQTYTLHEGDSIYLNKFTPHRYKN 162


>UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica
           DFL-43 RepID=A9D7J9_9RHIZ
          Length = 205

 Score = 74.3 bits (181), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R   GL  +  A  +  + S +S +E   VSP+I+ L ++ KV  +++S  F+
Sbjct: 25  GARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNISGLFA 84

Query: 69  EPEKPDEPQVVINQDDLIEMGSQ-------GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             E   E    I +     + S+       G++++ +     +  L        PG  + 
Sbjct: 85  PVE---ETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAASD 141

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             I+H+GEE+G V+EG + LT+  Q   L AG S+  ++  PHS+ N    + R++  ++
Sbjct: 142 GAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVNS 201

Query: 182 PTTF 185
           P ++
Sbjct: 202 PPSY 205


>UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA
          Length = 210

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ +  +RQ+ GLS +  A  +GL++  IS +E+ +  P+I TL+ L     + +S FF 
Sbjct: 27  GETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPISYFFE 86

Query: 69  EPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
             +  D  + ++  N   L+ + + GV +K     +    L +   T  PG ++G + ++
Sbjct: 87  TTDPGDVQRYIVRKNSRRLLRLTASGV-VKEALTPDGKGQLELYELTLNPGASSGTDFLQ 145

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           H GE+ G +L G + L ++ Q + L AG S+   + +PH F N +    R+I   T
Sbjct: 146 HTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201


>UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SGH2_9BACT
          Length = 196

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 5/184 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  +  G+R+ +IR ++GL+ +  A  +G + + IS IE + V P I+TL K+ KV  
Sbjct: 1   MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH----NGNPNRTLAMIFETYQP 116
           + ++ FF E E   +   V+ +D    +  +GV    ++           L ++  T +P
Sbjct: 61  VKMTYFFEE-EINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKP 119

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                +   H+G E   V+EG + + +      L AG S A N+ IPH+          +
Sbjct: 120 DKRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALV 179

Query: 177 ISAH 180
           + AH
Sbjct: 180 LCAH 183


>UniRef50_B3PEW6 Aldehyde dehydrogenase n=1 Tax=Cellvibrio japonicus Ueda107
           RepID=B3PEW6_CELJU
          Length = 201

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 6/179 (3%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D  +  G++L  IR+   LSQR  A+ +G+T+S+IS IEQ +VSP++ +L+++L  + LS
Sbjct: 14  DSHMDLGRKLKAIREAHNLSQRELAKRAGITNSSISMIEQGQVSPSVQSLERILTAFPLS 73

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNG--NPNRTLAMIFETYQPGT 118
           L+EFFS       P ++  Q   ++  +Q  G +++ + NG   P   +  IF    PGT
Sbjct: 74  LAEFFSPGGILPAPVLITRQLLELQQDNQVYGATIQHLVNGIDKPELDMQRIF--LPPGT 131

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            +       G+    +L+G I L        L  G    +  G  + F NT     +++
Sbjct: 132 RSALAYARVGDVSAVLLDGYITLYCGEVIMSLQPGDGVYLRRGHFYRFGNTHTDTAQLV 190


>UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium
           caulinodans ORS 571 RepID=A8I731_AZOC5
          Length = 231

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+   A G  + E R  +GLS +R A+ +GL+   +S +E+   SP++  L+ +    G+
Sbjct: 45  SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104

Query: 62  SLSEFFSEPEKP-DEPQVVIN--QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           ++   F E   P  E + V+   Q   +++G++G+  + +   + + TL ++     PG 
Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSDLS-TLQIMEIILAPGG 163

Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           ++GE    H GEE G V+EG + L I+G  + L+ G S+A  + +PH F N S G+ R++
Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223

Query: 178 SAHTPTTF 185
              TP  +
Sbjct: 224 WITTPPVW 231


>UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium
           carboxidivorans P7 RepID=C6PYK9_9CLOT
          Length = 181

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 5/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +++ ++R+++ L+ +  +  +GL+ S +S +E +  S AI++L+K+    G++++ FF 
Sbjct: 6   AQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYFF- 64

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN--PNRTLAMIFETYQPGTTTGERIKH 126
             E P+    ++  +D      +G + + +      PNR L  +  T  P    G    H
Sbjct: 65  --EIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNFSH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG + + I+  +Y++ AG S    +   H + N S    +I++  TP  F
Sbjct: 123 PGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLIF 181


>UniRef50_UPI00016AD0EC putative transcriptional regulator, XRE family protein n=1
           Tax=Burkholderia thailandensis MSMB43
           RepID=UPI00016AD0EC
          Length = 144

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 45  VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEP-QVVINQDDLIEMGSQGVSMKLVHNGNP 103
           +SP I++LQK+   + L ++         DEP ++    +DL  +     +++ +     
Sbjct: 4   ISPTIASLQKIAASFQLPVTSLIDA--SADEPTRIFYKHEDLTVVALGKHTIRQIGRNLS 61

Query: 104 NRTLAMIFETYQPGTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGI 162
            R L M+ +TY+PG  TG+  + H GEE G V+ G + +T+  Q   L  G++Y   + I
Sbjct: 62  RRALQMMEDTYEPGADTGDAMLSHAGEEAGLVIRGHLEVTVGDQVAVLGPGEAYFFESRI 121

Query: 163 PHSFSNTSAGICRIISAHTPTTF 185
           PH F N     C +++A TP + 
Sbjct: 122 PHRFRNRGNETCVVVAAATPPSL 144


>UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi
           HTCC2506 RepID=Q0FY73_9RHIZ
          Length = 154

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 8/155 (5%)

Query: 37  ISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD--LIEMG--SQG 92
           +S IE  KV P ++ L+KL     ++++ FF    KP++  VV  Q +  ++ +G  S+ 
Sbjct: 2   LSKIETAKVRPTMTMLRKLADELHVNIAFFFETYSKPED--VVHRQGERPILNVGAASEE 59

Query: 93  VSMKLVHNGNPNR--TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHL 150
           V+++L      +R   L       +PG +T     H GEE+G VLEGE+ +T+  + Y L
Sbjct: 60  VAIRLERLPPMSRQSLLEANIHIVEPGGSTEGAFSHVGEEMGFVLEGELTITVADETYRL 119

Query: 151 VAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
             G S+A ++ + HS+ N    + RI+  +TP +F
Sbjct: 120 RTGDSFAFSSTLLHSYKNEGDRVARILWVNTPPSF 154


>UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae
           RepID=A9BI07_PETMO
          Length = 178

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 4/165 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +R  + ++Q   A  S LT   IS +E+D  SP +  L+ +L+  G  L +FFS
Sbjct: 4   GEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKDFFS 63

Query: 69  EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
             E  ++ ++V  ++D I +     GV  +L+   +  + +       +PG +T     H
Sbjct: 64  NLE--NKEKIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIEKPH 121

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
           +G E+G V+EGEI L +N + Y +   +++  +    H   N S+
Sbjct: 122 EGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSS 166


>UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM1_DESHD
          Length = 179

 Score = 72.4 bits (176), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 17/181 (9%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +  +R+ Q LS +  AE + LT S +S IE++  SP++ TL+K+    G  +S FF 
Sbjct: 5   GSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALGYPISSFFV 64

Query: 69  EPEK-----PDEPQVVINQDDLIEMGSQGVSMKLVHN--GNPNRTLAMIFETYQPGTTTG 121
            P+      P E Q  I  +        G++++ + N  G  N+  A I E       + 
Sbjct: 65  NPQFTSTHIPAEAQRTIQINP-------GMTLRFLINNVGQRNQLGAYIAEV---ADLSE 114

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E I H G ++  VLEGE+   +  ++++L  G S   N  +PH  S  S    ++  A T
Sbjct: 115 EIIIHHGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVATT 174

Query: 182 P 182
           P
Sbjct: 175 P 175


>UniRef50_C1DA81 Probable transcriptional regulator n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1DA81_LARHH
          Length = 126

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           ++L +FF+   +P   QV     +L  +G+  + + LV   +P R + ++ E Y  G  T
Sbjct: 1   MTLGDFFTFEVEPRHKQVFYRAGELHNLGTDTMQLWLVGAAHPRRDMTLLSEHYAAGADT 60

Query: 121 G-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G + ++H G+E G V+ GE+ +T+      L AG +Y  ++  PH F N      +I+SA
Sbjct: 61  GPDMLQHDGQEGGLVIRGEVEVTVGSNIQVLRAGDAYYFDSREPHRFRNVGREEAQIVSA 120

Query: 180 HTPTTF 185
            TP T 
Sbjct: 121 STPPTL 126


>UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces
           sp. AA4 RepID=UPI0001B57A23
          Length = 178

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+ E R  +GL+ R+ A+ +G++   IS +E+    P++ T++++ +V  + L   F EP
Sbjct: 5   RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64

Query: 71  EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGE 129
           +  +E   VI  DD   + S   ++           L ++    +PG  + + ++ H  E
Sbjct: 65  D--EETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSE 122

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E   V+ G + + +  Q + L  G S   ++ +PH F N      R + + TP ++
Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178


>UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD
          Length = 205

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 8/178 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL   R+Q+GLS    AE +GL+   +S +E+D VSP+I +L  +    GL++++ F+
Sbjct: 9   GERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVGLAVADVFA 68

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTTTGERIKHQ 127
                  P VV    D    G  G  ++      P+     + ET   PG + G+ + H 
Sbjct: 69  V-----APVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGSGGDELYHL 123

Query: 128 GE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
               E+  V+ G I L    + Y L AG S        H++ N   G  R++    P 
Sbjct: 124 PSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVLWVLAPA 181


>UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3
           Tax=Burkholderia RepID=Q13H28_BURXL
          Length = 204

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 12/177 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R  QGLS    A  +G++   +S +E++K +P++  L++L +   + L+    
Sbjct: 20  GARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALLE 79

Query: 69  EPEKPDEPQVVINQD--------DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           E +   +P   I  D         L E+G  G+  +L+ + + +  L M+      G+ +
Sbjct: 80  EDDAVSDP---ITGDFVRKAAERPLFEVGKNGMQKELL-SPHGDHDLQMMIIMLPAGSGS 135

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            E +   GE+ G VLEG +VL +  +   L AG S+   + +PHS  N S    R++
Sbjct: 136 EEVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLL 192


>UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chloroflexus
           RepID=A9WJF8_CHLAA
          Length = 181

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 96/179 (53%), Gaps = 8/179 (4%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G+++  +RQ++GL+ +  +E SGLT S +S +E+DKV+ +++ L+KL + + + ++ 
Sbjct: 1   MSLGQKIGRLRQERGLTLQEVSEGSGLTPSFLSRLERDKVNISVANLRKLAQFFSVQMTH 60

Query: 66  FFSEPEKPDEPQV--VINQDDLIEMGSQGVSMKLVHNGNPNRTL-AMIFETYQPGTTTGE 122
           FF   E  D+ Q+  V+   D + +      +++     PN  L A + E Y PG++  +
Sbjct: 61  FF---EGEDDQQLGQVVRVADRVRLSLDDAPVQVFSLLPPNSDLDARLIEAY-PGSSQ-Q 115

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               +G ++  VL G +  T+  + Y L  G +        +S++NT   I  +++  T
Sbjct: 116 GFSSRGSQMVHVLAGHVRYTLGEEQYDLAPGDTLFFRDDTAYSWTNTGHSIATMLTVST 174


>UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL
          Length = 189

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 6/181 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK++ ++R  + L+ +  +E + L+   +S +E+   + AI +L K+ K   +SL+ FF 
Sbjct: 6   GKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQ 65

Query: 69  EPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--- 124
            P+K  +  +   + +++++  ++ +   L ++      L  + E     T + E I   
Sbjct: 66  APKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEIL--PTDSKENIISY 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H+GEE   VLEG + L IN  +  L  G S   ++ I H+++N ++   R+++ HTP  
Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183

Query: 185 F 185
           F
Sbjct: 184 F 184


>UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH
          Length = 181

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +++  +R+++ L+ +  +E +GL+ S +S +E +  S AI++L+K+     + ++ FF 
Sbjct: 6   AEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFK 65

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGN-PNRTLAMIFETYQPGTTTGERIKH 126
            PE     + ++ + +      +G S K +  +GN   R +  I          G +  H
Sbjct: 66  SPELH---KFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG I+  I+G++Y +  G S    + IPH  SN      +I++   P  F
Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181


>UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas
           aeruginosa group RepID=A4XQJ4_PSEMY
          Length = 188

 Score = 70.5 bits (171), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL   R+  G +  + A  +GLT S +S  E++    ++S+L  + K   + L+  F 
Sbjct: 7   GERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVLFD 66

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           +P +P +P   +N+     +G Q ++ + + +  P  ++  + +   P     E I H+G
Sbjct: 67  QPAQP-QPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAV-KMNIPVGYQSELIAHEG 124

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            E   VL G IV TI G+DY L  G S   + G  H  +N++     +++  T   F
Sbjct: 125 VEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181


>UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia
           RepID=A9ALB0_BURM1
          Length = 193

 Score = 70.1 bits (170), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G ++  +RQ+   +    A  +G++   +S +E+   SP++++L  + +  G+++  F
Sbjct: 16  ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75

Query: 67  FSEPEKPDEPQVVINQDDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
               + P E + V   + L   G   S  +  +L  N +  R L  I     PG    E 
Sbjct: 76  V---DTPSEERSVCRGEQLRFFGFADSANLFARLT-NLSEGRQLEAILVRMPPGQKRSEV 131

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H GEE   V+EGE+ LT+ G+ + L AG S    + +PHS++NT+     ++   TP 
Sbjct: 132 TTHAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPR 191

Query: 184 TF 185
            F
Sbjct: 192 LF 193


>UniRef50_Q21KB3 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans
           2-40 RepID=Q21KB3_SACD2
          Length = 175

 Score = 70.1 bits (170), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L  +RQ +GLSQR  A  + +T+S +S IEQ KVSP++++L+++L    +SL  FFS
Sbjct: 2   GRKLMRLRQDRGLSQRELARRAEMTNSTLSMIEQGKVSPSVASLERILSAIPISLEAFFS 61

Query: 69  EPEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF---ETYQPG-TTTGER 123
                   QV V  + +L  +   G ++ ++  G    TLA  +   +  QPG + T   
Sbjct: 62  N----STAQVGVYKEQELARVDLPGSTILML--GLSETTLAGCYLAKQVIQPGASVTINW 115

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           ++  G     V +GE+ +TI+   + L  G     N    HS  N       +I +  P
Sbjct: 116 LRRSGVIAAMVAKGEVKVTIDADVHLLREGDCLHFNLRRSHSILNPGTMPAELICSSLP 174


>UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales
           RepID=B0UAQ2_METS4
          Length = 207

 Score = 70.1 bits (170), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 2/167 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           LA G+RL  +RQ +GLS +  A  +GL+   +S +E+   SP++  L +L  +  + L+ 
Sbjct: 24  LAMGRRLRALRQARGLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLAS 83

Query: 66  FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123
            F     P EP V    +   + +   G++ +L+     +  L++      PG +TG E 
Sbjct: 84  LFGAAPGPAEPIVTRPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEA 143

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           + H GEE G VLEG + L +      L AG S+   +  PH + N S
Sbjct: 144 LTHGGEEAGLVLEGRLALWVEDAALSLAAGDSFRFASRRPHRYGNPS 190


>UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67K52_SYMTH
          Length = 196

 Score = 69.7 bits (169), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G R+ + R Q+G++ +  AE SGL+   +  +E DK SP++  L +L    G+ ++ 
Sbjct: 8   MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124
                E+     V  N      M  +G+S++L+    P R+L M+     PG  T G+  
Sbjct: 68  LLISQEERAHV-VRANARQGYSMNGEGLSVQLL--SAPGRSLKMMLLELAPGAATGGDNH 124

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            H+GEE   VL+G +      ++  L  G S   N  IPH   N      RI+   T
Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181


>UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ
          Length = 274

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 2/181 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +A G++L  +R+++GL+    ++ +G++ S +S IE  +V+ +I+TLQKL   Y  +L  
Sbjct: 95  IAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLY 154

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF   +  ++  V      ++E   +G+ ++L+   N      +++ T  PG    E I 
Sbjct: 155 FFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALNEPAMEPLLY-TVAPGAGRNENIS 213

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVA-GQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           H+GEE   VL+G + + ++  + ++V  G S    +   H + N        +  +TP T
Sbjct: 214 HEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPPT 273

Query: 185 F 185
           F
Sbjct: 274 F 274


>UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Rhodobacteraceae RepID=A6DW64_9RHOB
          Length = 209

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           LA G+R+ + RQ   ++ +  +   G++ S +S IE+D   P + TL ++     +S+  
Sbjct: 12  LALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSIDH 71

Query: 66  FFSEPEKPD-------EPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           F + P + D        PQ  I+   +I  ++G++           P   L        P
Sbjct: 72  FIATPRQADSVTRAETRPQFSISGTSIIYEQIGAE----------FPGHELTSFILNVPP 121

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           G  + E ++H GEE+  VL+GE++  +NGQ + L  G S       PHS+SN S    R+
Sbjct: 122 GYES-ETVQHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARL 180

Query: 177 I 177
           +
Sbjct: 181 L 181


>UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia
           RepID=B2A1T2_NATTJ
          Length = 192

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 6/180 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ + ++RQ + L  +  +E +G++   +S IE+ +V  ++ +L K+ K   + L  FF 
Sbjct: 16  GETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSFFE 75

Query: 69  EPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           E  +  E   V+ ++D   +++    V  +L+ + + NR + M+  T + G     E++ 
Sbjct: 76  ELNR--EKVSVVRKEDRKQLDIPRSNVIYQLL-SPDMNRKIEMLLVTLKSGEVEEHEKVT 132

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G V++G++ +T+  +   L  G S   ++ IPH F N        + A TP +F
Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192


>UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae
           TMO RepID=A8F3B6_THELT
          Length = 185

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 6/180 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +RQ + L+ R  A+LSG+T   IS IE  KVSP++STL+ +L   G ++     
Sbjct: 9   GEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALGETIISLV- 67

Query: 69  EPEKPDE--PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125
           E +  D+    +V  ++    + S G++ +L+   + N   +M     +PG  + E    
Sbjct: 68  EQDVGDQIIKGIVRKEERRKVIVSPGLTYELL--SSKNNAYSMFISYLEPGADSRESFYA 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+G E G V++GE+ +T+  +   L  G S    + IPH + N        +   +P +F
Sbjct: 126 HEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVWVVSPPSF 185


>UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ
          Length = 201

 Score = 68.9 bits (167), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL   R   GL+  + A+ S  + S IS IE  + SP+++ L ++      +++   +
Sbjct: 27  GVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALTT 86

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           E    + P  +  +  +I+ G   +S++ +        L        PG  +   I+H G
Sbjct: 87  EEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHVG 144

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           EE+G VLEG + L +  + + + AG ++  ++  PH + N      RI   +TP TF
Sbjct: 145 EEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201


>UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus
           RepID=A9A888_METM6
          Length = 209

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 4/170 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            K L +IR + GLS    ++L+G++   +  IE+++V+P IST+ K+     +S +   S
Sbjct: 34  SKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLKISFTSLLS 93

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RIKH 126
           E E  D   V +N    I   S+      V N   +R   + +    PG        IK+
Sbjct: 94  EKE-ADVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVMSSDGHIKN 152

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
             EE  TV EGE+ L+I  + Y +  G S      +PH + N S+ +  I
Sbjct: 153 -SEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVI 201


>UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax=Micrococcaceae
           RepID=A9WLK2_RENSM
          Length = 191

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 4/175 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+   RQ Q L+    AE +GLT   +S +E+D  SP++++L  L +V  +S+ + F 
Sbjct: 16  GSRIRAARQAQRLTIEHVAEATGLTKGFLSRVERDFTSPSVASLVTLCEVLAISIGDLFV 75

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
               P    V   +   + +G +G+  +L+   +  R   +  E    G    E      
Sbjct: 76  ---APSTHLVRAAEGPRVSLGGEGIIERLLTERSERRLQVLHAEIKPFGKGEDELYTVDC 132

Query: 129 E-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           E ++  ++EGE+ L    + Y L  G + +     PHS++N S  I R++   TP
Sbjct: 133 EVDVLHIIEGELTLRFTSESYELSTGDTLSFPGREPHSWTNYSDKIVRVLWILTP 187


>UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus
           HTCC2516 RepID=Q2CEW8_9RHOB
          Length = 202

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L   R+ QG++ R  AE +GL+   IS  E+D   P++S+L+K+ +V G+SL +   
Sbjct: 17  GAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGVSLQDILP 76

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE---TYQPGTTTGERI- 124
           E               +  M +   S + V++ +P  + AM +E   T  PG T    I 
Sbjct: 77  E--------------TVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIM 122

Query: 125 -----------KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
                       H GEEI  VLEG + + ++G+   L  G S   ++  PH+  N +  I
Sbjct: 123 RQPPGHRSELQSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEI 182

Query: 174 CRIISAHTPTTF 185
             I+   T   F
Sbjct: 183 VLILHVCTIDVF 194


>UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT
          Length = 201

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 3/175 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R+ +G +    A  +GL+ S +S +E+ + +  +  L ++    G +++  
Sbjct: 21  AIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIARL 80

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
             E E P    V+ +   +I  G  G + ++V    P     M+  T  PG   GE   H
Sbjct: 81  V-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139

Query: 127 QGE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           Q +  E   VLEGE+ LT++G ++ L AG +   +    H + N  A  CR + A
Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLA 194


>UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter
           sphaeroides RepID=B9KL60_RHOSK
          Length = 211

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL +IR+   LS    +E SG++   +S +E+    P++ T++++ +  G+       
Sbjct: 8   GQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVPPFWLLE 67

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG------NPNRTLAMIFET--YQPGTTT 120
            P++ +        D +I    QGV + +   G       P    AM   T   +PG+ +
Sbjct: 68  MPDQHNP-----EHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFDAMQLMTVVMEPGSKS 122

Query: 121 GERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G    +H+G ++G +L G + L ++G+ + L AG  +A ++ +PH F N       ++  
Sbjct: 123 GAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAEVLWI 182

Query: 180 HT 181
           +T
Sbjct: 183 NT 184


>UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D6V3_PAESJ
          Length = 182

 Score = 65.9 bits (159), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 4/160 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +  IR+++ ++  +  E +GL+   +S +E +K SP+I+TL+ +     + L+    
Sbjct: 4   GSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAYLLL 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           +  K ++ Q+V  + D   + + G     V + +  + + M+     PG +TGE   H+G
Sbjct: 64  D--KKEKMQIV--RKDGRRITTSGPDKLKVSHLSSTKNVHMMIVELPPGASTGENHAHEG 119

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           EE+  V++G I +        L AG S++ N   PH+  N
Sbjct: 120 EEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKN 159


>UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium
           RepID=A5TRU5_FUSNP
          Length = 184

 Score = 65.5 bits (158), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L + R  +G+S R  A    L+ S +S IEQ K SP+I  L+K+     + ++ +  
Sbjct: 4   GEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVA-YLI 62

Query: 69  EPEKPDEPQVV-INQDDL--IEMGSQGVSMKLVHNGNPNRTLA-MIFETYQPGTTTGERI 124
           E E+ D   +  I ++++  IE     + M ++ + N  + +  +I+E    G +  +  
Sbjct: 63  EDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRDFY 122

Query: 125 KH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            H   EE   +LEGE+ + +  + Y L  G S    + + H F NTS    + +   +P 
Sbjct: 123 SHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVSPP 182

Query: 184 TF 185
           TF
Sbjct: 183 TF 184


>UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM0_DESHD
          Length = 181

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ +  IR+++ L+  + A+   L++  IS IE++ VSP+++TL+++ +   + L  FF 
Sbjct: 5   GEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLESFFL 64

Query: 69  EPE--------KPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQPGTT 119
           +P+        K DE Q +          ++G + + L+ +   N   A + ++    T 
Sbjct: 65  DPDTEIIYSYLKKDEQQYI---------PAEGRNWRLLIDHSKTNLMGAFVVDS----TA 111

Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             + +  HQG E+  VLEGE  L I+ +DY L AG S   +  I H  +       ++I 
Sbjct: 112 VDKNVYSHQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIV 171

Query: 179 AHTP 182
             TP
Sbjct: 172 IATP 175


>UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C30FD5
          Length = 205

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 27  AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86
           A  +G++ S +S +E  +    I  L +L+  YG+S++E    P   D   V  ++   +
Sbjct: 46  ARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETRQL 105

Query: 87  EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146
               +G ++ L+ +G     L M+ E   PG +  E   H GEE   VL G + L ++G 
Sbjct: 106 HSPEEGTTIYLLASGTDRTMLPMLLE-LAPGASLAESGHHAGEEFVHVLAGRLRLEVDGA 164

Query: 147 DYH-LVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182
           + H L AG S    +  PH F N S     R+I   +P
Sbjct: 165 EPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSP 202


>UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C444_9CLOT
          Length = 199

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 4/160 (2%)

Query: 16  RQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDE 75
           R+++G++ ++ +E +GL+   +S +E++  SP +  +QK+ + +G SL   FS  E   E
Sbjct: 32  RRKKGMTLQQLSEATGLSIGYLSNLERNANSPTLVNIQKICEAFGTSL---FSLLEMNKE 88

Query: 76  PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTGERIKHQGEEIGTV 134
             +++  ++   + S+  +MKL +        + I+ T +P G   G   +H+  E+GTV
Sbjct: 89  EDIIVRHNEREPIISEEHNMKLENIDFGLDDTSFIYMTIEPDGAGDGLWWEHEYHEVGTV 148

Query: 135 LEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           ++G + L ++ Q + L  G +  I     H + N +   C
Sbjct: 149 IKGRLTLKLDNQVFELDEGDTILIKAHTRHCYYNKTQESC 188


>UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TJX2_9PROT
          Length = 192

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 9/164 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL ++R+++G++    A  +GLT   +S IE  K+ P I+TL ++ +  G  ++ FF 
Sbjct: 6   GPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIGCDMAYFFQ 65

Query: 69  EPEKPD--EPQVVINQDD----LIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             +  D  + +V + + D     +  GS  G   + + +   ++ +     T+ P    G
Sbjct: 66  SQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFTF-PAELQG 124

Query: 122 ER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
           +   +HQGEE+  VL G +V  I G++  L AG S   ++ +PH
Sbjct: 125 DTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPH 168


>UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K4_PELCD
          Length = 188

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 20/185 (10%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK+L   R  +GL+ +    LSG++ + IS IE+    P++  L KL    G+S+  F  
Sbjct: 7   GKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFVE 66

Query: 69  EPEKPD----------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           E EK            EP         I   +QG+        +P+ T  ++ +T +   
Sbjct: 67  EAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQ-------DPSFT--VLHDTLEKNC 117

Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            +G+  + H GEE   VL+G +   I  + Y L +G S +    +PH + N   G   ++
Sbjct: 118 NSGDAPMVHTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVL 177

Query: 178 SAHTP 182
              +P
Sbjct: 178 WVVSP 182


>UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium
           RepID=A6LSV7_CLOB8
          Length = 184

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G +L EIR ++ LS   AA+L+G++ + +  IE+ + +P +STL K+    GL +S  F 
Sbjct: 9   GSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKIST--GLKVSFSFF 66

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERIKH 126
             E+ DE ++V +Q+++  +      MKL  +   + NR   +     + G         
Sbjct: 67  IDEEQDELEIV-DQNNIDPIIEDDARMKLYPIFPFDANRGFEIFTIELESGCNHVSTPHS 125

Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
            G EE   V +GE+ + I+ Q Y L  G S      IPH + N S
Sbjct: 126 DGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVS 170


>UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC
           9817 RepID=C3WFC8_FUSMR
          Length = 187

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 20/190 (10%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  GK++   R  + L+ +  +E  G+T S +S IE+D V+P+I+TL+ + K   + L  
Sbjct: 8   LGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKALDVPLFM 67

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG-------NPNRTLAMIFETYQ-PG 117
           FF E           N ++L+   +   S+ L  N         P+   ++ F     P 
Sbjct: 68  FFKEE----------NNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPS 117

Query: 118 TTTGERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
            +  E I   H GEE+  +L+G++ + I  ++Y L  G S  I     H + N      +
Sbjct: 118 YSFTEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVK 177

Query: 176 IISAHTPTTF 185
           +I A  P +F
Sbjct: 178 VIFAINPPSF 187


>UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2
          Length = 201

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 12/185 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+  +R+++ L+  R AE +G++   IS IE+   +P+ +TL +L     + + +   
Sbjct: 21  GSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQLL- 79

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGV------SMKLVHNGNPNRTLAMIFETYQPG-TTTG 121
             E P+   VV+ +++   +   G+      S +L+   + N  L   +    PG  T+ 
Sbjct: 80  --EAPESKSVVVRKNERRRLDGHGLANDDGGSYELL-TPDLNGALEATWVVTPPGYDTSA 136

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAH 180
               H GEE G VL G   + ++G  + L AG S    + IPH + N S    C  I   
Sbjct: 137 TPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIWVS 196

Query: 181 TPTTF 185
           TP T+
Sbjct: 197 TPPTW 201


>UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Q4A0R4_STAS1
          Length = 181

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 4/171 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            K +++ R++  LS  + A  +G++ + +S IE+ + +P I+TL K+     +SLS+  S
Sbjct: 9   AKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLHISLSQLTS 68

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
                 +    I++ D+I +  + VS+      + N+   M     QPG        H G
Sbjct: 69  TSNDTID---FIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKMHSDPHHPG 125

Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            EE   V +G + + ++G+ Y +   Q++  N+ +PHS+ N    I  + S
Sbjct: 126 SEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTS 176


>UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JI22_AGRRK
          Length = 204

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 5/175 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+R+  +R ++ LS    A  +G++  A+S IE+   S  +  +  L     +  S    
Sbjct: 23  GRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDVEPSALIV 82

Query: 69  EPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           +  +P  D   V  N    + + ++G+S  L+    P   L  +    +PG  T E   H
Sbjct: 83  DGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGGT-ETYAH 139

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            G E G V  GE+ L ++   Y L  G S+A  + +PHSF N     C I+  +T
Sbjct: 140 TGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWVNT 194


>UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KY58_9GAMM
          Length = 219

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 10/184 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  + ++R+ +G++    +++S L+   +S +E+    P+I  L  + +  G+++S FF 
Sbjct: 39  GLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALGVTISWFFQ 98

Query: 69  EPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123
                ++P     VV + +      + G+  +L+ + N +R + M+  T+ PGT++G+  
Sbjct: 99  NQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELL-SPNLSRQIEMLKCTFPPGTSSGDVP 157

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLV--AGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             HQGEE G +L G++ L I  +D H+V   G S+A  +   H ++N       +I   T
Sbjct: 158 YTHQGEEAGIILSGKLNLWI--EDTHIVLEEGDSFAFASSKSHRYANLEDVETVVIWTIT 215

Query: 182 PTTF 185
           P ++
Sbjct: 216 PPSY 219


>UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter
           RepID=B8HGK7_ARTCA
          Length = 201

 Score = 63.5 bits (153), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 4/178 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++  +R+ +G++  R +E++GL+ + +S IE+   +P+ +TL +L     + +  FF 
Sbjct: 21  GNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDIPVGRFFI 80

Query: 69  EPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNR--TLAMIFETYQPG-TTTGERI 124
             ++   P V  + + +L  +  + V   +     P+R  T+   + +  PG  T+    
Sbjct: 81  GQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGHDTSATPF 140

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            H GEE   ++ G   + ++G  Y L  G S   ++ IPH + N+   +C  I  + P
Sbjct: 141 THSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAIWVNAP 198


>UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ
          Length = 203

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 2/173 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+R+ E+R + GL+ +  A+ SG++   +S +E+DK +P++ TL  +    G+ +  F S
Sbjct: 23  GERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVFIS 82

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
            P KP +      +     +    +  + +    P  TL+ +   + P     E   H G
Sbjct: 83  TP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLI-VHIPVGYASEITAHVG 140

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           EE+  VL+G +  T+    + L  G S       PHSF+N      R++   T
Sbjct: 141 EELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGT 193


>UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD
          Length = 197

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++ + R+ +GL+    ++ SGL+   +S IE+   SP++ ++ ++    G+ LS  F 
Sbjct: 17  GMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLFD 76

Query: 69  EP--EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123
               E P E  +V+ +     +++G+ GV+ +L+   +    + +   + +PG  +G E 
Sbjct: 77  NGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSP-DLGGEMQIYLVSIRPGGQSGPET 135

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             H+GEE G VL G + LT++ +   L  G S+   + + H F+N       ++ A++
Sbjct: 136 YTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVWANS 193


>UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium
           sp. Marseille RepID=A6T0N3_JANMA
          Length = 221

 Score = 63.2 bits (152), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 17/177 (9%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +SD  L  G+R+SE+R  +G +Q R A  +G T   +S IE  K+ P I TL K+ +   
Sbjct: 13  LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72

Query: 61  LSLSEFF--SEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNR-----TLAMIFE 112
             L+E       E+ D   +V + + + +  G +      V   N  R        M+F 
Sbjct: 73  TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVF- 131

Query: 113 TYQPGTTTGE-RIKHQGEEIGTVLEG--EIVLTING--QDYHLVAGQSYAINTGIPH 164
              P     E R  H+GEE   V +G  E    I+G  Q + L AG S   ++ IPH
Sbjct: 132 ---PNEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPH 185


>UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium
           RepID=Q18AY1_CLOD6
          Length = 183

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 6/167 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ L  +RQ+ G+S  +A++++G++ + +  IE+ + SP +STL K+   + ++ +   +
Sbjct: 9   GENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFKINFTTLLN 68

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAM-IFETYQPGTTTGERIK 125
           E     E   VI ++++  +  Q  +MKL  ++  +P R   + I E  +  T       
Sbjct: 69  ENTNTYE---VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTHVSSTHS 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
           H  EE   V+EG++ L ++G+ Y L +G S   +  + H + N + G
Sbjct: 126 HVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKG 172


>UniRef50_C6E2Z8 Phosphate butyryltransferase n=2 Tax=Geobacter RepID=C6E2Z8_GEOSM
          Length = 503

 Score = 62.8 bits (151), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 13/177 (7%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L  + Q +G++     E  G     +  +  D++SP IS L +L    G+ +SE   
Sbjct: 4   GGNLQAVLQARGVAPESVREALGWDRDTLDRVLTDRLSPGISELLRLATFLGVGISELLG 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLA------MIFETYQPGTTTG 121
             E+  +  V     +       GV  K  +H  +     A       + E Y+    + 
Sbjct: 64  GAEQAGKKAVKTGSRE-----RAGVDRKNFLHYESLASAYAGRHLEPFVVEVYRDDQGSE 118

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +  +H GEE   +L GE+ +T+ G+++ L AG S   ++ +PHS S+ S   CR+++
Sbjct: 119 DVSRHAGEEFLFLLSGELQVTVAGEEFRLEAGDSLYFDSELPHSLSSLSES-CRLVA 174


>UniRef50_B9MNZ2 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum
          thermophilum DSM 6725 RepID=B9MNZ2_ANATD
          Length = 143

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 54/75 (72%), Gaps = 2/75 (2%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GK+++E+R++ GL++ + +ELSG++ SA+S IE+    P I+TL+ + K   ++L++FF+
Sbjct: 4  GKKIAELREKYGLTRYKLSELSGVSQSALSEIERGIKQPTITTLENICKALNITLADFFA 63

Query: 69 --EPEKPDEPQVVIN 81
            EPE P E + +IN
Sbjct: 64 EKEPEIPPEVKSLIN 78


>UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria
           RepID=Q4ZU57_PSEU2
          Length = 201

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 5/161 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++   RQ Q L     A ++G++   +S IE  +VS ++  L +L  V G+ +S+ FS
Sbjct: 18  GIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLFS 77

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTTGER 123
           + ++     +++  D+ +E+  +G         L H   P ++      T    +     
Sbjct: 78  QYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFPT 137

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
             H G E   +LEGE++     Q Y + AG S   +  IPH
Sbjct: 138 FSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPH 178


>UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI
          Length = 178

 Score = 62.4 bits (150), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKRL E+R  +G+S R  A+ +G++ + +S IE+    P++STL+ L  V+G S++  F 
Sbjct: 3   GKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALFR 62

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHNGNPNRTLAMIFETYQPG-TTTGERIKH 126
           +P  P        +   I      VS  +L H   P   L  +F    PG  +    I H
Sbjct: 63  DPAAPSVWLSRPGERTQITGPKGTVSYERLTHGNAPMEVLRAVF---VPGQYSVAGTISH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              E   V+ G + + + G  + + A ++   +    H + N  A    I+ + TP
Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTP 175


>UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH
          Length = 204

 Score = 62.4 bits (150), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 8/180 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +  L   K L  IR+++ LS  + ++L+G++ + I  IE+ + SP ++T+ K+     
Sbjct: 20  MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP---NRTLAMI-FETYQP 116
           +S +   + P+ PD  +V++  D  I++ S+      V+   P   +R   +   E    
Sbjct: 80  VSFTSLINNPQ-PD-TKVILRND--IQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAE 135

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           G  + E  K   EE  TV EGE+ + IN   Y L +G +       PH++ N    + R+
Sbjct: 136 GKLSSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRL 195


>UniRef50_A0LTQ7 Transcriptional regulator, XRE family with cupin sensor n=3
           Tax=Actinomycetales RepID=A0LTQ7_ACIC1
          Length = 212

 Score = 62.0 bits (149), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 20  GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK------- 72
           G+S R  A   G++ S +S IE  K  P++STL  +    GL++ E F +P +       
Sbjct: 21  GVSLRSLARDLGVSASLLSQIETGKSQPSVSTLYAITTALGLAMEEVFEQPTRARRSVAP 80

Query: 73  PDEPQ------------------VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114
           P E                    VV  +D  +     GV+ + +    P+  +  +  TY
Sbjct: 81  PMEMDLSPPARAAREERHERLGPVVTPEDRKVLHLDSGVTWEWLGR-LPHSHVEFLLITY 139

Query: 115 QPGTTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
            PG T+   G  ++H G E G ++ GE++LT+  ++Y L  G + +  +  PH   N
Sbjct: 140 HPGGTSSSNGGLMRHHGAEYGYLISGELILTLGFEEYRLRPGDAVSFASTTPHRLRN 196


>UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum
           RepID=A6X8F8_OCHA4
          Length = 202

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF-- 66
           G R+   RQ  GL+    +E+SGL+  A+S IE+  VSP + TL  + +V  +S ++   
Sbjct: 24  GARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMSPAQLID 83

Query: 67  ---FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN--RTLAMIFETYQPGTTTG 121
              F+   + + P V+   +    + + GV   + H  +P    T+        PG ++G
Sbjct: 84  PQGFAAAARAN-PYVLRAGEQPEVLNAGGV---IKHRASPELIETMKSFAVRIIPGGSSG 139

Query: 122 ERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           E    H GEE+G V+ G   L I    Y L AG  +A+ +   H F N       ++  +
Sbjct: 140 EECYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGEAEAFVLWVN 199

Query: 181 TP 182
            P
Sbjct: 200 KP 201


>UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium
           RepID=Q8RFX4_FUSNN
          Length = 199

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 1/178 (0%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +  IR+ + L  +  A   G++ S +S IE+   +P+++T++ + +V  + L +FF 
Sbjct: 22  GITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLEVPLFKFFM 81

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           + EK      ++ +DD   + ++ V+ +L+  +   N     +    +   T+ + + H+
Sbjct: 82  DLEKEKYEFHLLKKDDRKIISTEYVTYELLSPDVETNIECMQMTLIGKNAETSVKPMAHK 141

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEEI  +L G++ LTI      L +G S  I + +PH ++N       +I + +P  F
Sbjct: 142 GEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIFSVSPPEF 199


>UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7
           Tax=Rhodobacteraceae RepID=Q28QP9_JANSC
          Length = 205

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G  + + R+Q  L+ +   + +GL+   +S +E+ + +P++ TL ++ +   + L  F
Sbjct: 11  ALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSVELEYF 70

Query: 67  FSEPEKPD-------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
            + P+  D        PQ  I+   ++         + V    P   L+       PG  
Sbjct: 71  IATPKPADSLSRGGARPQFSIDGSSIL--------YESVGADFPGAELSCYILHVPPGYA 122

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           + E + H+GEEI  +L GEI  T+ GQ + L  G S   +   PHS+SN +    RI+  
Sbjct: 123 S-EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWT 181

Query: 180 HT 181
            T
Sbjct: 182 GT 183


>UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae
           RepID=B9JGR0_AGRRK
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L  +R   G +  + A   G+T S +ST+E+     +  TL  L   YG ++S    
Sbjct: 97  GRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLSG 156

Query: 69  EPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFE-TYQPGTTTGERIK 125
           E E+ D P V+I   +       + GV+++L+  G   RT+         PG T+    +
Sbjct: 157 E-EREDVP-VLIRSGEWRAWPETTPGVTVQLLAEG---RTMMDCHRFVLAPGATSEGAYR 211

Query: 126 HQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           H GEE   +L G + L + N Q + L+ G S    +   HS+ N   G   ++  +TP T
Sbjct: 212 HDGEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPT 271

Query: 185 F 185
           F
Sbjct: 272 F 272


>UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes
           RepID=A4J4T3_DESRM
          Length = 180

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 1/176 (0%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           +++  +R Q+ ++ +  +E +GL+ S +S +E+   S AI++L+K+     + ++ FF+ 
Sbjct: 6   EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASFFAN 65

Query: 70  PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129
               +       Q      GS    ++L    +  R L  +  T+ PG        H GE
Sbjct: 66  YSNTNFTTRADEQKSFKIEGSSTEYIRLSGEFH-GRNLEPLLVTFAPGQVQPNTFCHPGE 124

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E   VLEG ++  ++G++  +  G +    + +PH + N      +++   TP  F
Sbjct: 125 EFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180


>UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes
           RepID=C6Q1A6_9CLOT
          Length = 184

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  L  GK L+ IR+Q+GLS  + AEL+G++   ++ IE+   +P ++TL K+     
Sbjct: 1   MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S F  E  +        N   ++E   + +   L    N  R      E  +PG   
Sbjct: 61  VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNTRRFEVFTIEL-EPGCNH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                ++G EE   V +GE+   I    Y L  G +       PH + NT+  I  +I  
Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEI--VIFQ 177

Query: 180 HTPTTF 185
           H    F
Sbjct: 178 HIIYYF 183


>UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RH93_9CLOT
          Length = 184

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 11/175 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++ ++R+++ L+ +  AE +GL+   IS +E+  V P++S+L+K+ +  G+S      
Sbjct: 3   GEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSPYLLVD 62

Query: 69  EPEKPDEPQVVI-NQDDLIEMGSQGVSMKLVHN-GNPNRT---LAMIFETYQPGTTTGER 123
           + E    P +V  +Q  +I+     +  ++V     P  T   + + F+    G  + E 
Sbjct: 63  QSEH--HPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT----SAGIC 174
           + H  EEI  +L+GE  + +    YHL AG S  +   +PH   NT    + G C
Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFC 175


>UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5
           Tax=Actinobacteria (class) RepID=A0JT75_ARTS2
          Length = 191

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +A G R+   RQ Q L+  + A+ +GLT   +S +E+D  SP++++L  L +V  +S+ +
Sbjct: 13  VAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSISIGD 72

Query: 66  FFSEPE----KPDE-PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119
            F+ PE    K DE P+        I +G +G+  +L+      R + +I    +P G  
Sbjct: 73  LFAAPETHLTKKDEGPR--------ISLGGEGIIERLL-TARSERRVQIIQAVIEPRGRG 123

Query: 120 TGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             E      + ++  V+ G I L +  ++Y L  G +       PH++ N +     ++ 
Sbjct: 124 ESELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLW 183

Query: 179 AHTP 182
              P
Sbjct: 184 VLVP 187


>UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO
          Length = 190

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 9/190 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + DE    G  L  +R+ +GL+    AE  G +   +S +E+DK  P+IS L+ + KV  
Sbjct: 5   LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64

Query: 61  LSLSEFFSE-PEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRT--LAMIFETYQ 115
           +S+S  F   P    E   ++       MGS  +G+  +L+   +P+ T    M+  T++
Sbjct: 65  VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELL---SPDLTDDFEMVHSTFE 121

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           PG+   E +    +E+  +L G + + IN   + +  G S+ I  G    +SN  A    
Sbjct: 122 PGSRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIR-GEAFRWSNPYAEPAV 180

Query: 176 IISAHTPTTF 185
            I    P  +
Sbjct: 181 AIWVIAPPVY 190


>UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales
           RepID=Q1GDQ0_SILST
          Length = 187

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDE +     L EIR   GLS  RAAEL+G++ + +  IE+ + SP I+TL K+ K + 
Sbjct: 1   MSDESIT--LNLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           L L+    E  +P      + +   +E  GS  +++K+V   +P+        + +PG +
Sbjct: 59  LPLTALIEESTRPSGRSGEVYRT--VEFPGS--IAVKIVFPYDPSLGAETFHVSLKPGQS 114

Query: 120 TGERIKHQ---GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
             E + H     EE+  VLEG + +  +G    L  GQ    +   PH + + S G  
Sbjct: 115 H-ESLPHDTGVTEEV-FVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170


>UniRef50_B5JDI3 Helix-turn-helix domain protein n=1 Tax=Verrucomicrobiae bacterium
           DG1235 RepID=B5JDI3_9BACT
          Length = 185

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 12/170 (7%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L +IR++  L+    +E SG++ + IS +E+++    + TL K+ KV+G+  ++  S  E
Sbjct: 20  LRDIRKRADLTLSALSERSGVSVAVISKLERNQTQAEVGTLHKIGKVFGMRATDLLSLAE 79

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKHQGEE 130
            P     + N+   ++  S   +++ +  GN +     I+ T + G    +  I H   E
Sbjct: 80  AP-----ISNKKSSVKYKSGDFALEAIRYGNAD----CIYATAEAGARVSKPEIHHDDHE 130

Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           I  VL G++ L +  + + L AGQS   +    H +       C ++  H
Sbjct: 131 ICWVLSGKVRLDLPNESHELGAGQSIQFDAIQEHRYEAIEQ--CEVVIVH 178


>UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q8Q5_9ENTR
          Length = 199

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R+ +G+     AE  G++ S IS +E++    +I+TL K+ +V G++ ++ F 
Sbjct: 22  GIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGITPAKLFD 81

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGERIKH 126
            P     P     Q   I +G + +   L+ +G  N  + +++    P  G+       +
Sbjct: 82  PPSTSFVPA---GQGTPISLGGEKMREYLI-SGGVNDDMMVLYSEIDPLGGSGAEPYTLN 137

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182
              ++  VL GE+ + +  Q Y L  G +      +PH++ N S   +C  I    P
Sbjct: 138 AAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWVIVP 194


>UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1
           RepID=Q0RYS8_RHOSR
          Length = 254

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 17/174 (9%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L   R  + LS R+ A+  G++ S +S +E  K  P++ TL  L  V  +SL +  S
Sbjct: 38  GVALKRARLDKKLSLRQVADQLGISTSLLSQVENGKTQPSVKTLFGLATVLEVSLDKILS 97

Query: 69  E--------PEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRT-LAMIFETYQPG 117
                    P   D    +    D  ++EM   GV+ + +  G   RT +  ++ TY+ G
Sbjct: 98  GRSGLDIELPADRDAAAGIQRAADNPVLEM-ENGVTWQRLATGG--RTEIEPLYVTYEVG 154

Query: 118 TTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
            ++   G++++H G E   +LEG + L ++  ++ L  G S+  ++  PH F N
Sbjct: 155 ASSSVDGKQMRHDGAEFAYILEGTLRLRLDFDEHDLGPGDSFCFDSSRPHLFYN 208


>UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria
           RepID=B5EKJ2_ACIF5
          Length = 181

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           K++ ++R+ +G S R  A  + ++ SA+S IE  + SP+I+TL+K+     + ++  F +
Sbjct: 6   KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65

Query: 70  PEKPDEPQVVINQD--DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER--IK 125
            E    P ++ + D       GS   S++ +  G P + +  +    +PG   GE     
Sbjct: 66  GETAGLPWIMRSGDRRKFYSAGSH-ASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTS 124

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
            +GEE   V+ G      +G    L  G +   +  +PH++ N
Sbjct: 125 AEGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHN 167


>UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia
           ubonensis Bu RepID=UPI00016A6284
          Length = 177

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 25/174 (14%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+  +R+Q  L+    A  +G++   +S IE+ +  P+I++L  + +  G+++  F  
Sbjct: 2   GNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFVG 61

Query: 69  EP---------EKPDEPQVVINQDDLIEMGSQGVSMKLV---HNGNPNRTLAMIFETYQP 116
            P         E P +P            G++ ++  L    H  N  +  AM+F     
Sbjct: 62  APGDAPTACRCEAPPQP------------GAEAIAHALAQVSHLANGTKLDAMLFR-IPA 108

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           G    E   H GEE   V+ GEI LT++ +   L AG++    + + H++SN +
Sbjct: 109 GQAALEVASHTGEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAA 162


>UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D5R2_PAESJ
          Length = 187

 Score = 59.7 bits (143), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKR+  IR++Q  +Q   +   G T S +S IE     PA++TL K+    G+ +S+   
Sbjct: 4   GKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSDLL- 62

Query: 69  EPEKPDEPQVVINQDDLIE-----MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           EP  P    V IN  D  E        +G S     +G  ++ +       + G      
Sbjct: 63  EP-SPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSHV 121

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT 160
             H+G+E   VL G++   +   +Y + AG     N+
Sbjct: 122 FSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNS 158


>UniRef50_B5H6V8 Transcriptional regulator n=1 Tax=Streptomyces pristinaespiralis
           ATCC 25486 RepID=B5H6V8_STRPR
          Length = 209

 Score = 59.7 bits (143), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 5/162 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G RL   R+Q+G +    +  +G++ S +S IE  +  P +  + +L+K YG+SL E   
Sbjct: 14  GPRLRATREQRGATLAGISSATGISPSTLSRIETGRRKPTLEVVLRLVKEYGVSLDELAG 73

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           + P    EP+        +  G   V + L            +    +       ++ H+
Sbjct: 74  TAPVPAAEPRTSAP----LSFGDSKVVLPLTRYVGGLHAHKHVLPAVEGPPARPRQVSHE 129

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT 169
           G E   VL G + L +  QD  L AG +   +T IPH+ +N 
Sbjct: 130 GYEWLCVLYGRLRLALGDQDLVLAAGDAAEFDTRIPHAVANA 171


>UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter
           usitatus Ellin6076 RepID=Q026G4_SOLUE
          Length = 225

 Score = 59.3 bits (142), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 30/192 (15%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G++L ++R ++ ++       +GL+ S +S +E  K+ P ++TL ++  V+ + L  FF 
Sbjct: 43  GRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHFFG 102

Query: 69  E------------------PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI 110
                              PE+ D P+     +  +   +Q   ++      P R  A +
Sbjct: 103 NRRGQKTFALVRAAERLRFPERADAPKPAYFFE-CLAFAAQSKGLQAYVAEFPPRRAADV 161

Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
            E +           H+G E+  VLEG + +   G+D+ L  G S   ++  PHS+   +
Sbjct: 162 QEHF-----------HEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVA 210

Query: 171 AGICRIISAHTP 182
               R I   TP
Sbjct: 211 EAPARAIVVTTP 222


>UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K5_PELCD
          Length = 188

 Score = 59.3 bits (142), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 15/185 (8%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK+L  IR +  L+ +  +E + ++ + IS IE+   +P++  L +L  V+  S++ F  
Sbjct: 8   GKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFVE 67

Query: 69  EPE--------KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           E E        +P E    +  D+      Q +  +    G  +      +   +P  T+
Sbjct: 68  EVENTHEIVHSRPGERSCTVFDDN------QNLRTESFTAGLRDPQFTSFYCVIKPHGTS 121

Query: 121 GER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G+  + H G+E+  VL+G + +T+ G+ + +  G+S +  + +PH ++N S     ++  
Sbjct: 122 GDADMFHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWV 181

Query: 180 HTPTT 184
            +P T
Sbjct: 182 LSPFT 186


>UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces
           RepID=D1XSL5_9ACTO
          Length = 206

 Score = 58.9 bits (141), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
           G+AP  RL ++R+ +GL+   AA  + L+ + +S +E  +  P++  L  L ++YG ++S
Sbjct: 17  GVAP--RLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGTTVS 74

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           E     E P E   ++    L   G++    +    G   R +      + P  T  E +
Sbjct: 75  ELLG--EMPPERDAIVRGGPL-GAGAEADGWRYRQAGGSGRAM-QALRVHVPHGTESELV 130

Query: 125 K-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           + H GEE   VLEG + + +    + L AG S   ++  PH  +       +++  HT
Sbjct: 131 RVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188


>UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales
           bacterium Y4I RepID=B6BB48_9RHOB
          Length = 218

 Score = 58.5 bits (140), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 32/187 (17%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G +L  +RQ + +   +  E +GL+ + +S IE+ +V P ++TL ++  V+G+ L  FF 
Sbjct: 32  GPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGLDHFFG 91

Query: 69  EPEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-- 125
             E  D P + ++ Q D +++G +           P   L+ +FE+      T  R +  
Sbjct: 92  PGE--DAPVLEIVRQRDRLKLGDK--------TSGP---LSYLFESLD-FPVTKSRFQSY 137

Query: 126 ---------------HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
                          H G E+  V+EG + L I+G+   L  G S   + G  HS+    
Sbjct: 138 LAEFSGNGSESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVP 197

Query: 171 AGICRII 177
              CR +
Sbjct: 198 GQRCRAL 204


>UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp.
           MC-1 RepID=A0L5V7_MAGSM
          Length = 183

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G R+ ++R Q+ L+Q+  A+++ +  + ++T+E+D  +P+++ + K+ +  GLS+ +   
Sbjct: 7   GMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLV 66

Query: 68  SEPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           +E E+    QVV  +Q   +E         +V  GN       IF + Q G     R   
Sbjct: 67  TERER---IQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIF-SLQAGAVYEGRPHP 122

Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            G EE   VLEG + L + G+   LV G S      + H + N +    R +
Sbjct: 123 PGSEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCL 174


>UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria
          RepID=A8GBR8_SERP5
          Length = 189

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           +RLS++RQQQG S    A+ +G++ + +S +E+ + SP  S L KL   YGL++S   S
Sbjct: 13 AQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYGLTMSRLLS 72

Query: 69 EPEKPDEPQVVINQD 83
          E E  DEP  +++++
Sbjct: 73 EVE--DEPPELLHRE 85


>UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales
           RepID=B5EB42_GEOBB
          Length = 188

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ ++R  + L+ +  A  +G + + IS IE D VSP I+TL K+ K + + L++FFS
Sbjct: 8   GPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFDVKLAQFFS 67

Query: 69  EPEKPDEPQVV-INQDDLI------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           E E     +VV  +Q  ++      E   QG   + +     N+ +     T        
Sbjct: 68  EDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVTLTEKAPEA 127

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
               H GEE   V+ G     +  Q   L  G S    + + H   +      R++
Sbjct: 128 NTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKEVRVL 183


>UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus ATCC 29083
           RepID=B5HW94_9ACTO
          Length = 194

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 4/175 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL+E+R ++G S    AE SG++ S +S  E+ ++SP  S L +L  VYG ++S+  S
Sbjct: 16  GVRLAELRAERGWSLGELAERSGVSKSTLSRAERAEISPTASLLNRLCGVYGRTMSQLLS 75

Query: 69  EPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           E E   EP  ++      + E  + G   + V   +P     ++      G     +R  
Sbjct: 76  EIEAEAEPAPLVRSAGQPVWEDRAAGFVRRSVSPPHPGLRGELVEGRLAAGADLAYDRPP 135

Query: 126 HQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             G E+   VLEG + +T    ++HL  G    +    P  F        R + A
Sbjct: 136 VPGLEQHIWVLEGALDVTAQDVEHHLDTGDCLRLRVWGPTRFRCAGPDAVRYVLA 190


>UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F379_9PROT
          Length = 180

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +  +R+QQGLSQR  AE +G++ +A+S +E  + SP+++TL+KL    G++++ FF 
Sbjct: 5   GGTIRSLREQQGLSQRALAEAAGISAAALSQLEAGQTSPSVATLEKLADGLGIAIAAFFL 64

Query: 69  EPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER---I 124
           +   P + ++  +N+   + +G  G  + L     P     M+ +   PG    E    I
Sbjct: 65  DSGNPADIEIFDLNERPSVPLGQGGRFVPLTAMHQPAGFEPMLVQL-DPGGCFDENKYGI 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           K     +  + +G  VL  + + Y L   QS   +   PH++ N S   C I+   +
Sbjct: 124 KSPHAFV-WMRKGRAVLEYDERSYELCEMQSVYYDARKPHNWRNISDTRCEILMVRS 179


>UniRef50_B5YHQ3 Helix-turn-helix domain protein n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YHQ3_THEYD
          Length = 419

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G +L EIR  + +SQ+  AE   LT   IS +E ++++P+I +  ++    G+  SE
Sbjct: 245 LDIGNKLREIRISRNISQKELAEKVNLTPGFISQMENNQIAPSIVSFMQICDALGVKASE 304

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVS----MKLVHNGNPNRTLAMIFETYQPGTT-T 120
             +E +   E + +I + D++    Q +S     +++ + N    L MI     P ++  
Sbjct: 305 ILNETKT--EEKFLIKKKDILAKLPQKISSADIYRVLSDENFQAYLIMI----PPNSSIK 358

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           G  +  +  EI  +++GE+ + IN   + L  G  + I   +P  + N
Sbjct: 359 GHFLTKKEPEIVFLIKGEVSVRINNSIHSLQEGDFFYIKKSMPEQWQN 406


>UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2
           Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ
          Length = 182

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
             RL ++R  +G S ++ A++SG++ SA+S IE  +VSP   TL  +   + +++S+  +
Sbjct: 9   ADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQMTISQLLA 68

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVH---NGNPNRTLAMIFETYQPGTTTGERIK 125
             E P +P V   +         G S ++V     G     +    E YQ  +  G   K
Sbjct: 69  PVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQIISYAGPS-K 127

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
              E    +LEG + +T+  + + L AG         P  F       C +I
Sbjct: 128 PGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLI 179


>UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771
           RepID=UPI00019046BF
          Length = 280

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 9/167 (5%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L  F
Sbjct: 100 AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 159

Query: 67  FSEPEKPDEPQV-VINQDDLIEMGS------QGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           F   +  +EP + V+ ++  +++ S           + +     +R +   +  +   + 
Sbjct: 160 FKADK--EEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDSP 217

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
             E  +H   E   VL G +V+ ++G++  L AG +   ++ +PHS+
Sbjct: 218 PSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSY 264


>UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria
           RepID=A0LGL4_SYNFM
          Length = 209

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 9/179 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ + R+Q+ L+    A  +GL  + +  +E+  V P++  L K+ +  GL L  F  
Sbjct: 27  GTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLGTFLD 86

Query: 69  EPEKPDEPQVVINQDD----LIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGE 122
           + E  D   V + +      +++   + V+++   +  G  +R +   +    P +   +
Sbjct: 87  DQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPESARDK 146

Query: 123 RIK-HQGEEIGTVLEGEIVLTINGQDYH-LVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           ++  H+GEE   VL GE V  I GQ+ H L AG S   N+ +PH  S+  +    I + 
Sbjct: 147 KLSAHEGEEFIVVLSGE-VEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIYAV 204


>UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Bacteria RepID=Q31LK1_SYNE7
          Length = 230

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  + E+RQ+  L+    ++ +G++   +S IE  + S ++ TL++L+ V G+SLS  F 
Sbjct: 26  GNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALFK 85

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLA------MIFETYQPGTTTGE 122
             E   E   ++ +    E+  +G       NG+  + LA        FE++    T  E
Sbjct: 86  GYEASSEQVFLVPEGTAKEVVRRG-----TRNGHTYQLLASDPTAQFCFESFL--ITLHE 138

Query: 123 R------IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
           R       +H G E   VLEG++      Q Y L AG +    + IPH
Sbjct: 139 RSEPFAAFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPH 186


>UniRef50_Q2RLS1 Transcriptional regulator, XRE family n=1 Tax=Moorella
          thermoacetica ATCC 39073 RepID=Q2RLS1_MOOTA
          Length = 101

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G RL E+R++  L+Q R A+LSG++ S IS IE     P   TL K+    GL+L+EFF+
Sbjct: 4  GNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAEFFT 63

Query: 69 EPEKPDEP 76
          E E P  P
Sbjct: 64 E-ETPSLP 70


>UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178AA45
          Length = 189

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 18/169 (10%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ L  IR+ +GLS    AEL+G++ + +  IE+   +P IS L +++   G+S +    
Sbjct: 9   GRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLGISFTTLIE 68

Query: 69  EPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTT 120
           E E       V++ DD+       G+  V     +N      L   FE+Y     PG   
Sbjct: 69  EAET---EVTVVSPDDVEPFHEAEGAYRVYPLFSYN------LRTKFESYMVIMDPGCDH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           G    + G EE   V +GE+ L    + Y + AG S   +   PH + N
Sbjct: 120 GSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVN 168


>UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905
           RepID=A3I6C0_9BACI
          Length = 182

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 3/178 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G ++ ++R++  +SQ   A    LT S IS IE  K +P++ TL K+ +++ + ++ 
Sbjct: 4   LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMA- 62

Query: 66  FFSEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           +F   ++ D   +V  +  ++ +E    G   +L+ N +    +     T   G      
Sbjct: 63  WFVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLAL 122

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             H+ +E   ++ G I+L  + + YHL  G S   +    H F N S+   ++++ + 
Sbjct: 123 YTHENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIYV 180


>UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER
          Length = 196

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 16  RQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDE 75
           R++ GL+    AE +GLT S +S +E+   +P+I+   K+ +V    + + FS+  + + 
Sbjct: 9   RRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLFSDSMEGNA 68

Query: 76  PQVVINQDDLIEMGSQGVSMKLVHNGNPNRT-LAMIFETYQPGTTTGER-IKHQGEEIGT 133
             +V  +D +I+  +  V   +     P+    AM      P +  G + + H GEE   
Sbjct: 69  MTIVRAKDRVID-PANSVQSSVYDPIAPSLVGKAMQPFVVHPASVMGPKFMDHTGEEFVF 127

Query: 134 VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
           V  G +   I GQ  HL AG S   +   PH   + SA
Sbjct: 128 VHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSA 165


>UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FE71_DESAA
          Length = 527

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 9/178 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  + ++R+    ++   A+ +G T   I+++E D++SP++S L +L +  G+    F  
Sbjct: 355 GATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPGTFLR 414

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPN---RTLAMIFETYQPGTTTGERIK 125
           + EK     +   +       +Q  S +++     N   R   +  E+ +         K
Sbjct: 415 DEEKS---AIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPV--EYK 469

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-IISAHTP 182
           H+GEE   VL+G++ LT++ + + L  G+S   N+ IPH   + S    R ++  +TP
Sbjct: 470 HEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527


>UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM
           12804 RepID=A9IK40_BORPD
          Length = 219

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G++L ++R+Q GLS  + A+  G++   +S +E+   SP++  +  L   +G+S+     
Sbjct: 33  GQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSVDSLLR 92

Query: 68  ------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
                  E            + DL++ G      K ++     R+L +      PG +TG
Sbjct: 93  GTGQGGGEAAGRVARAGTHRRVDLLDKGIH----KEMYTPPAGRSLDLCRARIAPGGSTG 148

Query: 122 ERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           + +     GE+IG VL+G + L +  Q   L AG S+   +  P  + N  + +  +I A
Sbjct: 149 DDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVIWA 208


>UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1S464_9ACTO
          Length = 214

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G R+   R+++GL+ R  A  SGL+   +S +E+   S  ++ L  + K    S+++FF 
Sbjct: 29  GGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFFD 88

Query: 68  ---SEPEK-----PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
              + P+      P    +   +    +  S   + +++ +  P+  L  +     PG  
Sbjct: 89  AGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGGR 148

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 H+GEE   V+ GE++  + G ++ L  G S  + + +PH   N +  +  ++S 
Sbjct: 149 RENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDAVTTVVSV 208

Query: 180 HTPTTF 185
            TP  F
Sbjct: 209 VTPRLF 214


>UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales
           RepID=Q21W54_RHOFD
          Length = 273

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R    RQ+Q LS  +A++LSGL  S IST E+      +++LQ+L   Y  S+++  +
Sbjct: 95  GVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNTSVTKLTA 154

Query: 69  ---EPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHNGNPNRTLAMIFETYQPGTTTGERI 124
                EK     V  N+  +    + G+++ +L  N     +L     T QPG  +    
Sbjct: 155 PEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAEN---LESLDCQKWTLQPGAGSDGAY 211

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR--------I 176
            H+GEE   +L+G + +TI+G       G+  ++  G   SFS+ SA   R        +
Sbjct: 212 SHEGEEFIHILQGVLTITIDG-------GEQISLGEGDSISFSSQSAHAWRAVGDIPTML 264

Query: 177 ISAHTPTTF 185
           +  +TP +F
Sbjct: 265 LWINTPKSF 273


>UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales
           RepID=A8I9H1_AZOC5
          Length = 216

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 2/158 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L ++RQ++G++  R A  S LT   +S +E+   +P+I+ L ++    G+++++ F 
Sbjct: 29  GPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQLFD 88

Query: 69  EPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
               P     +    D   +E G+ G+               ++   ++PG     R  H
Sbjct: 89  LNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRWAH 148

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
            GEE   V+ G + + +  +D  L  G S      I H
Sbjct: 149 GGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKH 186


>UniRef50_D2S780 Transcriptional regulator, XRE family n=2 Tax=Bacteria
           RepID=D2S780_9ACTO
          Length = 193

 Score = 56.2 bits (134), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 6/165 (3%)

Query: 20  GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVV 79
           GL+    A  +GLT   +S +E+D+VSP++++L  +  V G+ + + F   E P    V 
Sbjct: 31  GLTLAAVAAEAGLTKGFLSRLERDEVSPSVASLVTVCGVLGIGVGQLF---EPPATSLVR 87

Query: 80  INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGT--VLEG 137
             +   I  G QGV   L+  G   R L +I    +PG   GE +     ++    VL G
Sbjct: 88  AAEAPPINFGGQGVREVLLTAGA-QRDLHVIRSVIEPGGGGGEELYSLACDVEFVHVLRG 146

Query: 138 EIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            + L + G+   L AG ++ +    PH++ N SA  C ++   TP
Sbjct: 147 RLRLLLPGEVVELEAGDAFTMPGATPHTWLNPSAATCEVLWVLTP 191


>UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus
           RepID=Q0S834_RHOSR
          Length = 187

 Score = 56.2 bits (134), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +A G  +   R   GL+ R  A  +GL+   +S  E     P++  L ++ +V G +  
Sbjct: 9   AVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTAH 68

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNG----NPNRTLAMIFETYQPGTTT 120
               +  +     V   +     + S G  ++    G     PN        T QPG+  
Sbjct: 69  ALLEQGARTPTSLVRSREGRRFAL-SDGAVLRFCSTGVRAMEPNEV------TAQPGSQA 121

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           GE  +H GEE   V++G + + +  ++ Y L  G +      +PH + N +A   R +  
Sbjct: 122 GEHTEHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLIT 181

Query: 180 HTPTTF 185
            TP +F
Sbjct: 182 STPPSF 187


>UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae
           RepID=A6UHX0_SINMW
          Length = 193

 Score = 55.8 bits (133), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 86/178 (48%), Gaps = 9/178 (5%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L  F
Sbjct: 14  AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 73

Query: 67  FSEPEKPDEPQV-VINQDDLIEMGS------QGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           F+  +  +EP + ++ ++  +++ S           + +     +R +   +  +   + 
Sbjct: 74  FNVDK--EEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDSP 131

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             E  +H   E   VL G +++ +NG++  L  G +   ++ +PHS+ +    I   I
Sbjct: 132 PSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAI 189


>UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR68_RHOBA
          Length = 233

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 5/172 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +RL ++R  +G++    A+ SG T S +S +E  +++P++  L  L    G+S S    
Sbjct: 56  AQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSSLLE 115

Query: 69  EPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMI--FETYQPGTTTGERIK 125
             +  D PQ+V +  D+  ++     S    ++    RT   +  F    P     E   
Sbjct: 116 GLD--DRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGEEREPRT 173

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           H+GEE  TVL+G +      Q++ L  G S   ++ + H  +N  A    +I
Sbjct: 174 HEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVI 225


>UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5EUL8_9FIRM
          Length = 186

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 12/173 (6%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G+ +  +R+ + L+   AA  +G++ S ++ IE+  V+P IS L K+   Y +S   
Sbjct: 7   LEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS--- 63

Query: 66  FFSEPEKPDEPQVVINQDDLIE-MGSQGVSMKLVHNGNPNRTLAMIFETY----QPGTTT 120
           F S  E   E   VI   D+   M   G  M        +R L   FETY    +PG   
Sbjct: 64  FTSLVETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKL---FETYRIVIKPGGCL 120

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
             R    G EE  T+  G+ V+   GQ++ L  G S        H + N   G
Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTG 173


>UniRef50_A8LCT7 Transcriptional regulator, XRE family n=22 Tax=Actinomycetales
           RepID=A8LCT7_FRASN
          Length = 214

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R+Q G +    + ++G++ S +S +E  +    +  L  L K Y + L E   
Sbjct: 15  GPRLRALRKQNGTTLPALSRVTGISVSTLSRLESGQRRLTLELLLPLAKAYQVPLDELVG 74

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
            P   D P+V+    +   M      + L       R+  MIF    P  T  E   H+G
Sbjct: 75  TPPTGD-PRVLPRPFERDGM----TVVPLTRRPGGLRSFKMIFPPGWPACTR-ELQTHEG 128

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            E   VL G + L +  ++  L AG+    +T +PH+FSN S      IS   P
Sbjct: 129 YEWIYVLSGRLHLFLGEREVVLTAGEVAEFDTHVPHAFSNPSPEAVEAISLFGP 182


>UniRef50_UPI0001B4F46F transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC
           53653 RepID=UPI0001B4F46F
          Length = 161

 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 27  AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86
           A+ +GLT   +S +E+D+V+ ++ TLQ+L +V  LS+ + F +      P +       +
Sbjct: 2   ADRTGLTEGHLSQVERDQVNASVRTLQRLCEVLKLSVGDLFDQGGSVASPVLRFRDTHGM 61

Query: 87  EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG--EEIGTVLEGEIVLTIN 144
             G     +KL   G  +  L ++   + PG +TG      G  EE+  VL GE+ + + 
Sbjct: 62  SFGEGATKIKLTPGGFDH--LEVLLGHFAPGGSTGVEPYTHGSSEELLLVLSGEVEVWVR 119

Query: 145 GQDYHLVAGQSYAINTGIPHSFSN-TSAGICRIISAHTPTTF 185
            Q + L A  S    +  PH     T     R++ A  P T+
Sbjct: 120 EQPHRLSAFDSIHYLSSEPHRVVEVTGTEEARVLWAIAPPTY 161


>UniRef50_A4F638 Transcriptional regulator, Cro/CI family n=1 Tax=Saccharopolyspora
           erythraea NRRL 2338 RepID=A4F638_SACEN
          Length = 201

 Score = 55.5 bits (132), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 7/162 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+  +R ++GL Q   A  + L  + ++ +E    +P++  L +L +   + LSE F+
Sbjct: 24  GGRIGRLRTERGLDQATLARRAELEQTHLAGVESGTATPSLPVLAQLAEALDVGLSELFT 83

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET---YQPGTTTGERIK 125
           +  +P    VV+  D++  +   G+S++++    P   +  ++         ++    ++
Sbjct: 84  D-ARPGPAAVVLRGDEVPSVDDGGMSVQVL---TPRAVIPGLYAARYRLSSASSAVRPVR 139

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167
           H G +   VL GE+ +        L AG S + ++ +PH  S
Sbjct: 140 HVGHDWLYVLSGELHVEFESDSTTLRAGDSVSFSSKVPHKLS 181


>UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5
           RepID=B6JAK2_OLICO
          Length = 202

 Score = 55.5 bits (132), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+R+   RQQ+G+S  + A  +GLT S +S +E+    P+I+T  K+ +V+G ++ +   
Sbjct: 24  GERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQLLG 83

Query: 69  EPEKPDEPQVVINQDD-----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             E  DE  + I + +     L      G +++ + +  P++ +            +  R
Sbjct: 84  --ESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
             H GEE+  VL G+I +    +   L AG +   N+  PH
Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPH 182


>UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PEN9_9FIRM
          Length = 188

 Score = 55.5 bits (132), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 9/183 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +   R++Q +S +  A    ++ S +S IE +K  P+++TL+++    G+++S+   
Sbjct: 5   GMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKLLG 64

Query: 69  EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124
           E E      ++I ++    L  +G  G+ ++ +   +P + +        P   +G+   
Sbjct: 65  EDESVR--LMMIKKESRHRLTNLGD-GLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPY 121

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQS-YAINTGIPHSFSNTSA-GICRIISAHTP 182
            H G+EI  VLEG I L ++ +   +  G S Y I+    H F N S     R++    P
Sbjct: 122 THAGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNP 181

Query: 183 TTF 185
             F
Sbjct: 182 PYF 184


>UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus Desulforudis
          audaxviator MP104C RepID=B1I2F7_DESAP
          Length = 245

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 41/65 (63%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G R++  R++ G+SQ++ AEL+ L  S IS IE    SP++  L ++ +  G++L+EFF 
Sbjct: 4  GPRIARFRERAGMSQKKLAELAALDRSHISKIESGDTSPSLEALMRICESMGVTLAEFFG 63

Query: 69 EPEKP 73
             +P
Sbjct: 64 SDVQP 68


>UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter
           RepID=C6E5F4_GEOSM
          Length = 199

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +RQ+Q L+ +  A+++GL+   +S IE D+V+P I+TL K+ K   + +  FF 
Sbjct: 15  GEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIHYFFE 74

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKL-VHNGNPNRTLA----------MIFETYQPG 117
           E    D  + ++ + +   +GSQ    K  + +G   + LA           + E  Q  
Sbjct: 75  EA--GDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQRA 132

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                   H+G E   +L+GE+      +   L AG S    +  PH + +      R +
Sbjct: 133 WDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRARAV 192

Query: 178 SA 179
           + 
Sbjct: 193 AV 194


>UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2
           Tax=Bacteria RepID=C1ZLV1_PLALI
          Length = 189

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +R+   R  Q L+  + A  +GLT S  S +E  +++P++ +L ++    G+S+S+   
Sbjct: 7   AQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSDLVE 66

Query: 69  EPEKPDEPQVVI---NQDDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
             ++  +PQ+ +   ++  ++E     S  V   L H   P+R +     T   G    +
Sbjct: 67  GLDR--KPQMAVIRKSERKVVERNPETSDIVYESLAH-VRPDRAMDPFLLTVPAGGQRKD 123

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
            + H+GEE   VL G++ L  N +   L  G S   +   PH   N      R++  
Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCV 180


>UniRef50_C9XPQ5 Putative transcriptional regulator (Putative uncharacterized
           protein) n=3 Tax=Clostridium difficile
           RepID=C9XPQ5_CLODC
          Length = 188

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  IR+ +  +    ++L+ L+ S IS IE+D + P++S+L+K+ +V    L  F  
Sbjct: 3   GEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMFMD 62

Query: 69  EPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           +    D   +VI ++D +       EM  + VS        P+  L + FE         
Sbjct: 63  DNNTDD---LVIRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPS-ILFVEFELKPESEDAK 118

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           + I H  EEI  V  G + + +  +   L  G S  I   +PH   N S
Sbjct: 119 DYIYHASEEIMVVTSGVVDICMGEKVVRLNPGDSTFIKANVPHKIINPS 167


>UniRef50_D1PQA9 Toxin-antitoxin system, antitoxin component, Xre family n=4
          Tax=Clostridiales RepID=D1PQA9_9FIRM
          Length = 103

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 42/62 (67%)

Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
          +RL ++ Q++G S+ R A++SGL  S IS I +    P I TL+ + K +G++LS+FF+E
Sbjct: 5  ERLRKLLQERGWSEYRLAQVSGLNESTISNIYRRNTLPTIPTLEAICKAFGITLSQFFAE 64

Query: 70 PE 71
           +
Sbjct: 65 SD 66


>UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2
           Tax=Bacteria RepID=Q1AWJ9_RUBXD
          Length = 203

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 2/168 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+R+  +R+++GL+    A  SG++ + IS +E+ +  P +    +L +  G+SLSE   
Sbjct: 18  GERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGVSLSELAG 77

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           E E+     V   +   +     G   +L+  G   R +  I      G+T+GE   H+ 
Sbjct: 78  ERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSGEFPPHRP 137

Query: 129 --EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
             EE   V  G ++  + G ++ L  G +      +PH F N   G C
Sbjct: 138 GVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGEC 185


>UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LFU9_RALME
          Length = 212

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 18/167 (10%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +RL+E+R+  GL+    A+ + LT S +S +E+   SP I T+ KL    G+++ +  +
Sbjct: 31  AERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQLIT 90

Query: 69  EPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTL-------AMIFETYQPG 117
              + +E  + I   D I         G + + +    P++ +           E  QP 
Sbjct: 91  RSSRANE-ILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMVPPFTLEEDQPM 149

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
            +      H GEE+  V+ GE+ +  + +   + AG S   N  IPH
Sbjct: 150 AS------HAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPH 190


>UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales
           RepID=C8X7U0_NAKMY
          Length = 197

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  +R Q+GL+    +  +G++ S +S +E  +  P +  L  L   Y + L +  +
Sbjct: 20  GPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDDLVA 79

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
            PE+ D P++ +    +         + L    +  +   +I  T      T E   H G
Sbjct: 80  APEEGD-PRLRLKPGRV----KGRTVIPLTRQSDGMQAWKIIIPTSN---VTPETRSHDG 131

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +E   VL G +   +  QD  L  G   A +T +PH F +T      I+S
Sbjct: 132 DEWIYVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILS 181


>UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium
           RepID=B1M8P3_METRJ
          Length = 202

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%)

Query: 18  QQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQ 77
           +QGLS    A  SG++ S IS IE+ +  P+   L +L +  G++ S   +   + +   
Sbjct: 32  EQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGVTFSRLMAPATEREILL 91

Query: 78  VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG--EEIGTVL 135
           +  ++  ++   + G   + +    P R +  +  T  PG +TGE   H+    E   VL
Sbjct: 92  IPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTGEFTAHRRGVSEYIYVL 151

Query: 136 EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
            G +   I  +   +  G S        H+F+N     C
Sbjct: 152 RGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEAC 190


>UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales
           RepID=Q39Q24_GEOMG
          Length = 198

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G+++ ++RQ+Q L+ +  +ELSGL+   +S IE D+V+P I+TL K+ K   + +  
Sbjct: 13  LRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIHY 72

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-------- 117
           FF E E  D+ ++V+ +        Q  + +   N  P+     ++ +  PG        
Sbjct: 73  FFEEEE--DQQKLVLTR-----ASQQTATRRRTGNDAPH---GYVYRSLAPGIRHKPMEP 122

Query: 118 ---------TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
                           +H G E   +LEGE+          L  G S   ++  PH +
Sbjct: 123 FLVEFELTEWDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGY 180


>UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Thermoprotei
          RepID=A1RRK6_PYRIL
          Length = 516

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 39/60 (65%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G RLSE+R+++GLS  R A L+G++ S +  IE DK+SP+I+TL  +    G+   E  +
Sbjct: 6  GNRLSELRRRKGLSLSRLARLAGVSKSTLWEIENDKISPSINTLWAIANALGVPFGELVT 65


>UniRef50_C7Q0I6 Transcriptional regulator, XRE family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7Q0I6_CATAD
          Length = 223

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 5/172 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G RL  +RQ+  ++    A+ +G++ S +S +E     P +  L  L + +G++L E 
Sbjct: 41  AVGPRLKRLRQRSDITLTDLAKKTGISASTLSRLEAGLRRPTLEQLLPLARAHGVTLDEL 100

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
              P   D P++ +     I  G   V + L       +    +    +       R  H
Sbjct: 101 VDAPPTGD-PRLHLRP---IACGDGSVILPLTRRPGGIQAYKFVLPAGRDDDAPDPRT-H 155

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G +   VL G + L +   D  L AG+    +T  PH F  TSAG    +S
Sbjct: 156 AGFDWVYVLNGTLRLVLGEHDLLLKAGEVAEFDTRTPHWFGATSAGPVEYLS 207


>UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria
           RepID=Q7MEH5_VIBVY
          Length = 232

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E L  G+R+ E+R + G++   A++ +GL  S +S IE +++SP    +QKL     + +
Sbjct: 49  EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMG------SQGVSMKLVHNGNPNRTL--------AM 109
            + F  P K    +V   + D+   G      +Q    +L+     N+ +        A 
Sbjct: 109 PQLFEPPRK----KVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHAR 164

Query: 110 IFETYQPGTTTGERIKHQGEEIGTVLEGEI 139
            FE Y      G+ ++H GEE   +L G +
Sbjct: 165 TFEEY------GDWVRHDGEEFLLILSGAV 188


>UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3
          Length = 220

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 10/181 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL  +RQ + L+   A++L+G+  +  S IE +K+SP    L ++++  G    +  +
Sbjct: 32  GQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDVLT 91

Query: 69  EPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT----GE 122
              +      V + +D++   + +      L+H    + +  MI    Q    T    G 
Sbjct: 92  NQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHR---DSSAGMITLRMQVDARTVDEAGG 148

Query: 123 RIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              H+G+E   VL GE+ L   +G+   L AG+S   ++  PH++   S     ++   T
Sbjct: 149 LAGHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLT 208

Query: 182 P 182
           P
Sbjct: 209 P 209


>UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN
          Length = 189

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 81/173 (46%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +  +R  +  + ++ AE + L+ S +S +E+ K S  + +L+K+ +  G+S   FFS
Sbjct: 6   GVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYFFS 65

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
                   QV     +   +       + + +   N TL  I  T  P    G    HQG
Sbjct: 66  GESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVHQG 125

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           +E   VLEG + + +  +++ L  G S  +++ +PH++ N +  + R +  ++
Sbjct: 126 QEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178


>UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria
           RepID=D2R569_9PLAN
          Length = 202

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 17/172 (9%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+  +R+ +G +  + A LSG++ S +S IE+   +P +    ++ + +G++L +    P
Sbjct: 21  RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80

Query: 71  EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI-----FETYQPGTTTGERIK 125
           E P     VI  DD   M       ++       RTL+ +      E Y+    TG +++
Sbjct: 81  EPPKPRIDVIRSDDRSFMFRDDSDCRI-------RTLSPLHLEKDVEFYELTLRTGGKLE 133

Query: 126 HQ-----GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
            Q       E  TV +G + LT   +   L  G S      +PH   N   G
Sbjct: 134 SQPHFEGTREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRG 185


>UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
           DSM 7454 RepID=B6WAA2_9FIRM
          Length = 212

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 12/185 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GK +   R  Q LS ++ AE   ++ S +S IE  K +P+++TL+ + +   + +   F 
Sbjct: 32  GKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVPMFTLFI 91

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN---PN-----RTLAMIFETYQPGTTT 120
           E E  D P +++ +++ I + ++G   K   + +   P+     +   M    YQ  +  
Sbjct: 92  E-EDIDRP-ILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAYQYNSDN 149

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                H GEE+     G+I L +  +   L  G S  I     H + N S   C II + 
Sbjct: 150 FNF--HNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATCAIIFSI 207

Query: 181 TPTTF 185
           +P  F
Sbjct: 208 SPPIF 212


>UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria
           RepID=C9Y4D6_CROTZ
          Length = 199

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +A  +RL   R++  ++    +  +G++   +  +E+   +P+I+ L K+    GLS+++
Sbjct: 20  VALAQRLKSWRKEHNVTLDTLSRRAGVSKGMLVELEKAAANPSIAILCKIAAALGLSVAD 79

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGERI 124
                 +P    +  +Q  ++  G  G + +L+     P+     + E ++     GER 
Sbjct: 80  LLDVASQPAARLIEASQIPVLWTGDSGGTARLLAGTSGPS-----MVELWRWEMRPGERF 134

Query: 125 KHQGEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
              G   GT     V +G + L++N +  H+ AG S    T  PH ++N
Sbjct: 135 TSPGHPQGTAELLHVEQGILTLSVNDERLHINAGASAVARTDAPHGYAN 183


>UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1A8D2_THECD
          Length = 187

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%)

Query: 1   MSDE---GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M+D+   G A  + +  +R   G S  + A  +G++   +  +EQ + +P + TL ++ +
Sbjct: 1   MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60

Query: 58  VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
             G+ L+      E+P        +  ++  G  G S  L+       ++ +     +PG
Sbjct: 61  ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                     G  EI  V EG + +T++GQ + + AG +       PHS+SN    +CR 
Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180

Query: 177 I 177
           +
Sbjct: 181 V 181


>UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=Desulfococcus
           oleovorans Hxd3 RepID=A8ZUX9_DESOH
          Length = 433

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 9/175 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M    L  G R+ E+R ++G+SQ   A   G+T S IS +E +++ P++  L K+ ++  
Sbjct: 246 MRSGSLDLGLRIKELRTKKGMSQVALARGIGVTPSTISQVENNQIFPSVPALIKMSEILS 305

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN------PNRTLAMIFETY 114
           + +  FF +      P+VV ++ + +     G++ +L+            + +  I E  
Sbjct: 306 VDVGYFF-QTGAGSAPRVVFSEFEAMPSPVPGMARRLISCRRLMPEDMEAQCVPYIIEI- 363

Query: 115 QPGTTT-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           QPG    G     +GEE G ++EGE+ +T+      L  G    +   +P  + N
Sbjct: 364 QPGAVLDGHFFSLKGEETGFLMEGELHMTLGHGAQPLQTGDLVYLAAEVPSQWEN 418


>UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=Deltaproteobacteria
           RepID=B8F9X8_DESAA
          Length = 433

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 11/177 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G R+ ++R ++GLSQ + A++ G+T S IS +E + + P+I  L K+ ++  +S    F 
Sbjct: 255 GTRIKQLRVKKGLSQVQMAKMVGVTASTISQVENNSIYPSIPGLLKMAEILNVSPGYLFS 314

Query: 68  SEPEK------PDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           S+ EK      P      +   +L E  GS  +   L   GN       + E     T +
Sbjct: 315 SDFEKRSQIVFPSGQASAVTLANLSEYEGSVKMLTPLDFEGNAE---PFMIEIEPEQTVS 371

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           G    H+G+E+G V  G + ++   + +   +G    +    P  + N   G  R+ 
Sbjct: 372 GHFFAHRGQEMGYVARGALEISFGDEIHKAKSGDLVYLQDQTPTRWYNPGPGAARLF 428


>UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Flavobacteriaceae
           RepID=C0YU86_9FLAO
          Length = 189

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 18/184 (9%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D  +  GKRL +IR++  L+    A  + +++  +S IE  +  P++  L  L++   
Sbjct: 1   MNDFLIGIGKRLKDIRKKNNLTINELAFKANVSNGLVSRIENGRTIPSLPVLLDLIQSLE 60

Query: 61  LSLSEFFSEPEK---------PDEPQVVINQDDLIEMGSQGVS-MKLVHNGNPNRTLAMI 110
           +  S FF   EK         P E Q VI +    E+ ++G   M +      +     +
Sbjct: 61  IDASYFFEGVEKKSNAKFIYVPKESQQVIEK----EVEAEGFRYMHIFSKSLHSLGFEAV 116

Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH---SFS 167
             T +P +   E++     E   +L+GE+   I+ ++  L  G S   N   PH   S S
Sbjct: 117 LLTLEPNSKR-EKVITDAWEFKYILKGEVKYVIDNEEVSLKEGDSLYFNGKFPHVPVSIS 175

Query: 168 NTSA 171
           N S 
Sbjct: 176 NESC 179


>UniRef50_Q9RVJ9 Epoxidase, putative n=1 Tax=Deinococcus radiodurans
           RepID=Q9RVJ9_DEIRA
          Length = 161

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  IRQQ+ L+  +  + SGL  S +S +E+D  +P+++TL K+    G+   E F 
Sbjct: 18  GARLRAIRQQKRLTLEQVVQGSGLDKSYLSRLERDLTTPSVATLVKVCDALGIRPGELF- 76

Query: 69  EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNG 101
                D P+  I + D   L   G +GV+ +L+  G
Sbjct: 77  -----DPPKTRIVRRDSAPLANFGGEGVTERLLSQG 107


>UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=Firmicutes
           RepID=A9VF72_BACWK
          Length = 197

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 15/184 (8%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ +   R++  ++ R  A+ +G++ S IS IE+   +P+++ L+ + K   + L   F 
Sbjct: 18  GQTVLSYRKKNNMTIREFADYAGISTSLISQIERGHANPSLNVLELIAKALNVPLFTLFI 77

Query: 69  EP--------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
                     +K D  +V    +D I      V   L  +    R   ++ +      TT
Sbjct: 78  NDIDTDSLISKKKDRKKVYRENNDHI------VYDVLTPDFMKARIEMLMMDLNGYANTT 131

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                H+  EEI  V++GE+ + + G +Y L  G    I   + H F N S  +  I+  
Sbjct: 132 ESHYSHEDKEEIAVVMKGEVYVELEGNEYFLEEGDVVRIPPNVKHRFLNKSDEMNHILFV 191

Query: 180 HTPT 183
            TP+
Sbjct: 192 LTPS 195


>UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZGC0_BREBN
          Length = 185

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++  IR+++G +    A  +GL+   +S +E+    P++ +L K+ K     +  FF 
Sbjct: 9   GHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALESPIIHFF- 67

Query: 69  EPEKPDEPQVVI----NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123
             E  D+ QV +     +  L+   S G    L   G+    L M+     PG    ++ 
Sbjct: 68  --EDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK--LGMLEVRLMPGEMAVDKF 123

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           ++ +GEE  TV+ G +    N +++ L AG S + ++   HS  NT      +I +  P 
Sbjct: 124 VQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSVNPP 183

Query: 184 TF 185
            F
Sbjct: 184 QF 185


>UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella
           bronchiseptica RepID=Q7WPD8_BORBR
          Length = 201

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 16/197 (8%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D+    G+ +  IR+++ +S +  A  SG+    +S IE+D  +P++ TL ++ +   +
Sbjct: 3   ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62

Query: 62  SLSEFFSEPEKPDEPQVVINQ----------DDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111
            LS  F   ++                      +++ G+  ++ +++      R   M+ 
Sbjct: 63  PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQRLQFMVL 122

Query: 112 ETYQPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNT- 169
              QPG T+G   + +  E+ G VL+G   L ++GQ   L  G S+  +   PH F N  
Sbjct: 123 NI-QPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181

Query: 170 --SAGICRIISAHTPTT 184
              A I  II AH P  
Sbjct: 182 DEPASILWII-AHEPAA 197


>UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=Rhodococcus
           erythropolis PR4 RepID=C0ZNA0_RHOE4
          Length = 187

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
           G + GK +   R +QG+  R  A   G++ S +S  E  +   A++TL  +     LSL 
Sbjct: 2   GTSVGKTVRAERTRQGIPVRELARRLGVSPSFLSQFELGQSQAAVNTLFAIATELNLSLD 61

Query: 65  EFFS---EPEKPDEPQVVINQ---DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
                  +PE+  E +   ++    D +   S GV  + + N   N  +  +   Y+PG 
Sbjct: 62  VLLGNSVDPERESESESKTHEPRISDCLTFRS-GVRWQRLANTPENHHVQFLLTEYEPGA 120

Query: 119 TT--GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
            +  G+  + H G++ G VLEG + + I+G    L +G++  +   +PH   N +    +
Sbjct: 121 DSAPGDAPQTHSGDDYGYVLEGTLTIDIDGMRRLLKSGEAIHLVGNVPHRLRNETDQTVK 180

Query: 176 II 177
            I
Sbjct: 181 AI 182


>UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NHK0_EUBSP
          Length = 184

 Score = 53.1 bits (126), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L EIR+ +GLS  +A+ L+ ++ S +S +E+ +V+P IST+ KL     + ++ F  +  
Sbjct: 12  LKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLKVPVTAFTLDKP 71

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKL-----VHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           KP        + +++ +       +L       +G       + F+  + G   G R  +
Sbjct: 72  KPFSK---TGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFD--EGGMMPGNRQMN 126

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHTP 182
              E  TV  G++ L+   ++Y L AG++ + N    + + NT  G+    I  H P
Sbjct: 127 GTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTASIVVHYP 183


>UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AS09_RUBXD
          Length = 292

 Score = 52.8 bits (125), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
           PG+RL  +R +   + +  +E +GL+ S IS +E+     ++++L++L + YG+++ E F
Sbjct: 118 PGERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELF 177

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
               + + P V  ++  ++E    GV  + +  G   + +   +     G  +     H 
Sbjct: 178 GTDLEQNSPLVRAHERPVMEW-DNGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHD 234

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVA-GQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE   V+ G + + +  Q  + V  G +   ++  PH +      +   +  +TP TF
Sbjct: 235 GEEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWWAGDEPV-EAVYVNTPPTF 292


>UniRef50_B9MNH1 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum
          thermophilum DSM 6725 RepID=B9MNH1_ANATD
          Length = 77

 Score = 52.8 bits (125), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 42/64 (65%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GK+L ++R Q+GLSQ++ A+++G+  S I  IE++  +P I T+++L    G+S+ EF  
Sbjct: 3  GKKLRKLRTQKGLSQQQLAKIAGVPQSTIWYIERENRNPTIKTMKRLATALGVSIEEFLD 62

Query: 69 EPEK 72
             K
Sbjct: 63 SETK 66


>UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 Tax=Streptomyces sp. C
           RepID=UPI0001B57C0C
          Length = 213

 Score = 52.4 bits (124), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           + E +  G+ + E R  + +S    A  SGL+   +S +E+   +P++S++ ++ +   +
Sbjct: 29  TPEAIEVGRAIRECRTARRVSMAVLAARSGLSQPFLSQLERGLATPSLSSIYRIAEALDV 88

Query: 62  SLSEFFSEPEKP------DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
           +   F   P +P       +PQV+   +      + G   +++  G  +  +      ++
Sbjct: 89  APGTFLRPPGRPGVVSHESDPQVIRVSE------AAGQVARVLIPGGRSALMEAYEHHFE 142

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPH 164
           PG       +H GE+   VLEG +VL + G++   L AGQS      +PH
Sbjct: 143 PGQGERGWFEHPGEDFLYVLEGSVVLEVRGEEPLLLTAGQSAHHRGDLPH 192


>UniRef50_UPI0001C376DB transcriptional regulator, XRE family protein n=1
          Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C376DB
          Length = 102

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 39/61 (63%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G RL EIR+ +G S  +  + SGL+   IS +E+    P I TLQKLL   G++L+EFF+
Sbjct: 4  GTRLREIRKAKGFSMYKLHKESGLSQGHISDLEKCINQPTIETLQKLLTPMGVTLAEFFN 63

Query: 69 E 69
          E
Sbjct: 64 E 64


>UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription
           regulator protein n=1 Tax=Spiroplasma citri
           RepID=Q14Q08_SPICI
          Length = 177

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 7/179 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +RQ+  L+    A    LT   IS +E+D  SP+I TL+ +L+V G +L++FF 
Sbjct: 4   GEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLADFFK 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQ 127
           + EK  +      +   +E  +  +   LV N   N    ++ +    G +  ERI   +
Sbjct: 64  Q-EKNRKFVYAAEEHYKVEQNNYRIEW-LVPNAQVNELEPILIQIKPQGES--ERILPFE 119

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQ-SYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           G+  G VL+G  VL  +GQ       + S+ +     H   N +  I  ++   TP  F
Sbjct: 120 GQIFGYVLKG-TVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177


>UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales
           RepID=A1BBT3_PARDP
          Length = 184

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 5/152 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G+ +  +R+ +G++    A   G +   +S +E+ + +P++  L ++    G+++S FF 
Sbjct: 6   GEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFFR 65

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           S    P+E  +V+   D   +GSQ  G+  +L+ +   + +  MI  T+ PG ++G R K
Sbjct: 66  SSSRAPEERGLVLRAADRTPIGSQESGLVEELL-SPTLSGSFEMIKSTFAPGASSGGRRK 124

Query: 126 HQGEEIGTVL-EGEIVLTINGQDYHLVAGQSY 156
            + +E G VL  G + L I  ++  L  G S+
Sbjct: 125 ARPKEDGGVLISGRLTLIIGDREIQLEPGDSF 156


>UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium
           RepID=C7IC10_9CLOT
          Length = 184

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +R+++ LS    A+LSG++ S +  IE+ +V+P +ST+ K+     +S S+  +  E
Sbjct: 12  LKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLKVSFSQLVNHTE 71

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG-EE 130
              E   + N   L+E   + V +    + +  R   +    +Q           QG +E
Sbjct: 72  TNVEIVDIKNLKPLLEDEGR-VRIYPTFSFDSTRRFEIYSLEFQTNGYLSTEPHLQGVQE 130

Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
             TV  GE+ +T+  + + +  G++       PHS+ NT    C
Sbjct: 131 FLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANC 174


>UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1AZ95_PARDP
          Length = 204

 Score = 52.0 bits (123), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS- 68
           +RL  +R+++G S  RAAE  G+  S +S IE  K+SP +  L K+++ + +  ++ FS 
Sbjct: 16  ERLRALRERKGWSLNRAAEEVGVPPSTLSRIENRKMSPTLDLLLKIVRTFDMHPNDVFSG 75

Query: 69  EPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT--TGER 123
            P++ ++ ++ +++     LIE+ +  +  K +H          I  T    +    G  
Sbjct: 76  RPDQQEKQEISVSRASDPALIELPN--LFYKHLHPDMECFNFRAILITLFARSVEEYGGL 133

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDY-HLVAGQSYAINTGIPHSFSNTSAG 172
             H G+E   +L G++ + + G     L  G S    + IPH++   SAG
Sbjct: 134 TAHSGQEFVYLLSGKLQVHLEGHPLVTLAPGDSIMFTSSIPHAY--VSAG 181


>UniRef50_Q2CGQ2 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus
           HTCC2516 RepID=Q2CGQ2_9RHOB
          Length = 188

 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 27  AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLI 86
           A+ +GL+   IS IE+   +P++S+L  + +V G S+ EF   P++  E      + ++ 
Sbjct: 5   ADEAGLSVGFISQIERGLTAPSLSSLATIAEVLGASIPEFLDRPKRGSETTRQAMR-EVF 63

Query: 87  EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146
            + +  +S + + +      L  +   ++P    GE I H+GEE+  VL GE+ + I G 
Sbjct: 64  ALAASDMSYERISSSFRGSQLYSVI-VHEPPGHRGEPISHRGEEMFFVLAGEVTVEIEGT 122

Query: 147 DYHLVAGQSYAINTGIPHSFSN 168
              L +G S   ++   HS  N
Sbjct: 123 IDVLRSGDSVHFDSTRVHSTWN 144


>UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine
           actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN
          Length = 169

 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%)

Query: 27  AELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDL- 85
           A  S L+ + +S IE+ K +P+ +TL +L     + +  FF    +P  P  V+   D  
Sbjct: 7   AAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASP--VVRSGDRR 64

Query: 86  ----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGEEIGTVLEGEIV 140
               +   S G ++  +     N  +   +    PG  T+     H GEE G V+ G+I 
Sbjct: 65  NLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMSGKID 124

Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           + ++G+ + L AG S    +  PH + N     C  I   TP+
Sbjct: 125 VYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTPS 167


>UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria
           (class) RepID=A1RBM5_ARTAT
          Length = 206

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 9/168 (5%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           LA G R+ + RQ +G +  + AE +G++   I  +EQ   +P++ TL ++    G+ L  
Sbjct: 16  LAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGVGLPA 75

Query: 66  FFSEPEKPDEPQVVINQDDLI----EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
               P +P   +V  + +       E G +GV   LV        + +   T  PG   G
Sbjct: 76  LVESP-RPKPVKVTRSGEGAALWTSEQGGRGV---LVAGTESPDVVELWDWTLGPGDQHG 131

Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
                 G +E+  VL G + + ++G    L AG S      + HS++N
Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYAN 179


>UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO
          Length = 189

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 24/174 (13%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R  E+R+ +  S R AA+ +G++ S +S IE+   SP  + L KL + +G+S+S+     
Sbjct: 8   RFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLVGGE 67

Query: 71  E-------KPDEPQVVIN-------QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           E        P   Q V         +  L  + SQ   +  V N  P    +  F  ++ 
Sbjct: 68  ELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPPHRA 127

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           G           EE  TV  G + L +  + Y L AG +      + H F N S
Sbjct: 128 GV----------EETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPS 171


>UniRef50_A4J2V8 Helix-turn-helix domain protein n=3 Tax=Desulfotomaculum reducens
          MI-1 RepID=A4J2V8_DESRM
          Length = 206

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 4/77 (5%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GKR++  R++ G+S+R+ A++ G+  S I+ IE +   P++ TL+++    G+ L++FF+
Sbjct: 4  GKRVTFFREKLGISKRKLAKMIGVDPSLITKIEANNTKPSLDTLERICTSLGIELADFFA 63

Query: 69 EPEKPDEPQVVINQDDL 85
          E  K    Q+ +  DDL
Sbjct: 64 EECK----QLRVVSDDL 76


>UniRef50_A4J2X4 Putative transcriptional regulator, XRE family n=1
          Tax=Desulfotomaculum reducens MI-1 RepID=A4J2X4_DESRM
          Length = 106

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 43/69 (62%)

Query: 11 RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
          +++++R+  G S+ + A+ SGL+ + IS +E  +  P I +L ++    GL+L+EFFSE 
Sbjct: 9  KITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLTLAEFFSEE 68

Query: 71 EKPDEPQVV 79
           KP  P + 
Sbjct: 69 NKPLSPDIA 77


>UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO
          Length = 207

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 11/177 (6%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A  +++ ++R  +G S    A  SG++   +  IE  + +P+I TL ++   +G+S++  
Sbjct: 14  AVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSIARL 73

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125
               E+        ++  ++  G  G   +L+   G P+     + E +      GE ++
Sbjct: 74  LEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPD-----LVELWDWRMEPGEALR 128

Query: 126 -----HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                H   EI  VL+G   +T++G D+ + AG++   +    H +     G  R++
Sbjct: 129 SPDHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLM 185


>UniRef50_D1C7G3 Putative uncharacterized protein n=1 Tax=Sphaerobacter
          thermophilus DSM 20745 RepID=D1C7G3_SPHTD
          Length = 406

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G RL   R+  GL+Q  AA   G+TH+ IS  E D+ +P +  L +L ++YG +++    
Sbjct: 8  GARLRAAREWAGLTQEEAASALGVTHALISYWENDRRTPGLGHLTRLAEIYGTTVTNLLD 67

Query: 69 EP-EKPDEPQVVINQDDLIEMGSQ 91
             E+P  PQ  +   DL ++  Q
Sbjct: 68 PAHEEPAGPQPALLFRDLRDLAPQ 91


>UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHE5_SYNFM
          Length = 204

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G ++ E+RQ+  L+ +  A  +GL+   +S IE +KV P ++TL +L +   ++L  FF 
Sbjct: 19  GNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHFFQ 78

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMK-LVH-------NGNPNRTLAMIFETYQPGTTT 120
           E  + D+   +  + + + +  +    K LVH           N+++      + P    
Sbjct: 79  ESVE-DDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEF-PTQEK 136

Query: 121 GERI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            E +   H+GEE   V+EG++      +   L  G S  I + + HSF        R ++
Sbjct: 137 EEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALA 196

Query: 179 A 179
            
Sbjct: 197 V 197


>UniRef50_C9XR68 Putative phage DNA-binding protein n=6 Tax=Clostridium difficile
           RepID=C9XR68_CLODC
          Length = 280

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  GK L +IR+Q+ L+Q + AE+SG++ +A+   E DK  P+I TL KL K   +  + 
Sbjct: 27  LQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTI 86

Query: 66  FFSEPEKPDEPQVVINQD 83
           F+ +     E +V+ N+D
Sbjct: 87  FYFDI----ENEVMTNED 100


>UniRef50_Q2RI10 Transcriptional regulator, XRE family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RI10_MOOTA
          Length = 300

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 41/66 (62%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G +L  +R++ GL+Q+  A+  G++HS I  IE D++ P++STL  L +  G+S   F  
Sbjct: 141 GAKLKRLREKIGLTQKELAQQVGISHSLIGQIETDRIQPSLSTLSSLAEALGVSTCYFLM 200

Query: 69  EPEKPD 74
           E ++ D
Sbjct: 201 EDDEED 206


>UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0B5S6_9FIRM
          Length = 194

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+R+ E R+++ ++ R   E +GL+   +S +EQ+K SP + +L ++ +   + + ++  
Sbjct: 8   GERIRECRKKKMMTIRVLGEYTGLSAGYLSMLEQNKTSPNVDSLARICEALDIDI-QYAL 66

Query: 69  EPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIK 125
           E E P   + VI+++++ +     + +++++   G        I  T +PG +   E  +
Sbjct: 67  EGEMPG--KTVIHREEMSKHLYPEENMTVEVADFGQGESIFEYI--TIEPGESAKKEEYR 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           H   E+  V++G + + + G+   L  G S  I +   HS SN     C
Sbjct: 123 HVFSEMCMVIKGTLNVEVEGKICSLHPGDSVYIKSRERHSISNPGKEPC 171


>UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB
          Length = 229

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 7/178 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL   R+ Q ++    ++ + ++ S +S IE DK  P++ +L  +    G+ ++ F +
Sbjct: 29  GPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDITTFLT 88

Query: 69  EPEKPDEPQVVINQDD----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
             E PDE   +I ++      +  G   + ++++   + +  L        P  + G  +
Sbjct: 89  L-EIPDE--FLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGGPSM 145

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            H+GEE+  V++GE+ +T+N   +    G S    +   H++ N S     +I  +TP
Sbjct: 146 SHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINTP 203


>UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF
          Length = 180

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 24/174 (13%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKR+  +R  + L+Q    E + LT   IS +E+D  SP+I TL  +L+V G +  +FF 
Sbjct: 4   GKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKDFFD 63

Query: 69  EPEKPDEPQVVIN---QDDLIEMGSQGVSMK-LVHNGNPNRTLAMI--------FETYQP 116
           E E     Q VI    +    E   +G  +K LV   N      ++        F++++P
Sbjct: 64  EEEH---NQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
             +         E    VL+GE+ + +   +Y    G++   +    H   N S
Sbjct: 121 SLS---------ETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRS 165


>UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5VF82_SPHWW
          Length = 252

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 11/181 (6%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
           PG  L   R  +GLS R  A  +GL  S +S +E  K+      L  L +  G+ + + F
Sbjct: 39  PGPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLF 98

Query: 68  SEPEKPDEP-------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           S    PDEP       + +I   +  E  S+      +     ++ +  +    +  T  
Sbjct: 99  ST-AAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVEARTLE 157

Query: 121 GER--IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             R   +H+GEE   VL G + L  +      L  G S   ++G+ H++   S G CR++
Sbjct: 158 EYRGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRLL 217

Query: 178 S 178
           S
Sbjct: 218 S 218


>UniRef50_B9MNH2 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum
          thermophilum DSM 6725 RepID=B9MNH2_ANATD
          Length = 105

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GKR+ E+R++ GLS  + A+++G+  S +S IE  + +P I  + K+     ++L EFF 
Sbjct: 5  GKRIKELREKCGLSMSKLAKIAGVGQSTLSYIENGERNPTIDVIIKICNALDITLVEFFG 64

Query: 69 EPEKP 73
            EKP
Sbjct: 65 GEEKP 69


>UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli
           RepID=A5IRY5_STAA9
          Length = 179

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
           G ++  +R+ + L+Q   AE + L+   IS IE +  SP++ T   +++V G + SEFF 
Sbjct: 4   GNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSEFFK 63

Query: 68  -SEPEK---PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
            SE EK     E QV+ ++ D      +G  +  + + +    +  +  T +PG +    
Sbjct: 64  DSENEKVLYKKEEQVIYDEYD------EGYILNWLVSKSNEYDMEPLILTLKPGASYKNF 117

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
              + +     + G+I L +  + Y               H  SN S    RI+   T +
Sbjct: 118 NPSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVATAS 177


>UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales
           RepID=D2PZI7_9ACTO
          Length = 200

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 10/162 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L   R +QG+S    A  SG+    +S +E    +P I T+  L    G+ +S   S
Sbjct: 15  GVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVSALLS 74

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGT---TTGERI 124
           EP   D   V++   D   +    V ++++    NP     +  +  +PG    +TG   
Sbjct: 75  EPPASD--LVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTG--- 129

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
            H G E   VL G + +T   +   L  G   A     PH +
Sbjct: 130 -HPGTEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEY 170


>UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO
          Length = 204

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L E+R++ GL+   AA+ + L+ + +S +E  +  P++  L  L + YG ++SE     E
Sbjct: 20  LRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGTTVSELLG--E 77

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGEE 130
            P  P  V+    +    + G +     +G   R +        P  + G+ ++ H GEE
Sbjct: 78  TPAGPGAVVRAGTMEPTEAGGWTYW--QSGGSGRAM-QALRVRVPYGSQGDIVRVHPGEE 134

Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              VL G + L +    + L  G S   ++  PH  +        ++  HT
Sbjct: 135 WLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185


>UniRef50_A5V678 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5V678_SPHWW
          Length = 259

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL  IR+         + ++GL  S IS +E   +S     L +++K   + L + FS
Sbjct: 18  GARLRAIRKSNNWKISDVSRMTGLAISTISKVENGHMSLTYDKLMQVVKGLSIDLVDIFS 77

Query: 69  EPEKPDEP--------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF--ETYQPGT 118
            P   + P        + V  +D+  E+ ++  + + ++     + +  I    T +   
Sbjct: 78  NPAMSEAPARAMVTARRSVGREDNSYEIDARFYNYRYLNTDLAQKAIIPILGETTAKSIE 137

Query: 119 TTGERIKHQGEEIGTVLEGE-IVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             G+ I+H+GEE   VLEG  +V T       L  G+S  I++ + H++        + +
Sbjct: 138 EFGDMIRHEGEEFLYVLEGNLLVYTEFYNPVRLTVGESLYIDSTMGHAYIAVDCEKAKFL 197

Query: 178 SAHT 181
            A T
Sbjct: 198 CACT 201


>UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4
           Tax=Actinomycetales RepID=D2BA96_STRRD
          Length = 192

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 11/172 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ E+R  +GL+ ++ A  + ++ S +S++E+ + +P +  L ++    G+SL+E  +
Sbjct: 8   GLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLGVSLAELVA 67

Query: 69  EPEKPDEPQVVI----NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           EPE   + +V++    +QD + E G  G    ++    P      I  T  PG   G   
Sbjct: 68  EPE---DRRVIVRRAADQDTVDEPG--GWHRSILTPVVPGVNFEWIRTTLPPGCDAGRFP 122

Query: 125 KH-QGEEIGTVLE-GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
            + QG     V+E G + LT+  Q   L  G S        H + N     C
Sbjct: 123 AYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPC 174


>UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=A6V6S7_PSEA7
          Length = 183

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +RLS +R ++ L+  + AE S ++ + IS IE+++ SP  S L +L    G++LSE   
Sbjct: 8   ARRLSTLRSERRLTLAQLAERSAVSKAMISRIERNESSPTASVLGRLAGGLGVTLSELLG 67

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             + P  P    ++ ++ E  + G   + V   +P+    M+ E   P  T  +  +  G
Sbjct: 68  NTQAPAAPLCRRDRQEVWEDPASGYRRRQVGARDPHSGCEMV-EVEIPADTRLDYPRWGG 126

Query: 129 EEIG---TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRII 177
                   +LEG + +    Q + L  G    ++ G+  + +  +AG  CR +
Sbjct: 127 RPYRQRLWLLEGTLEIGYGEQRFMLEHGDR--LDFGVDRAVTFVTAGQPCRYL 177


>UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus
           JCSC5402 RepID=B9E9Z3_MACCJ
          Length = 167

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 84/174 (48%), Gaps = 14/174 (8%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G+ + +IR+++ L+ ++ AEL+ L+   +S +E +K    ++T++ +     +  S+
Sbjct: 1   MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSM-KLVHN-GNPNRTLAMIFETYQPGTTTGER 123
           FF E           +  D++    Q     +L ++ G+P   L +     +PG T  E 
Sbjct: 61  FFYEHA---------SLMDVLNAKRQSFYYEQLAYDKGSPFIPLKV---KLKPGNTDLEY 108

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           ++H G E    L+G + ++++  +  L  G+S   +   PH + N +  +   +
Sbjct: 109 VQHDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFL 162


>UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA
          Length = 224

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           RL  +R+Q+G +    AE +GLT S +S +E+    P+I+   KL K   + + + FSE 
Sbjct: 43  RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSE- 101

Query: 71  EKPDEPQVVINQDDLIEMGSQGVSM---KLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
            +  E   V        MGS   +     +     P + L  +    +   ++  R +H+
Sbjct: 102 SRDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFR-EHE 160

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
           GEE+  V +G + +    +   L  G S   N  IPH
Sbjct: 161 GEEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPH 197


>UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii
           DSM 10542 RepID=D1BGL3_SANKS
          Length = 204

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  +   R+Q  LS +  A+ +G++   +S +E+   +P++ ++Q+L    G+S++    
Sbjct: 24  GATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGVSVTRLL- 82

Query: 69  EPEKPDEPQVVIN--QDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
             E P E  VV+   +  ++ +       G +++ + +      + +I  T  P  T  E
Sbjct: 83  --EPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPAFTNVE 140

Query: 123 R-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           R  +H G E  TVL G + +T   ++  L AG +       PH ++N   G   ++ A  
Sbjct: 141 RPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVVLGAVA 200

Query: 182 PT 183
           P+
Sbjct: 201 PS 202


>UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=Desulfovibrionales
           RepID=B8J4U1_DESDA
          Length = 189

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 7/163 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+   R+++ +     A+ +GL    +  +E D + P+I  LQK+ +  G+ L  F  
Sbjct: 8   GSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTFLD 67

Query: 69  EPEKPDEPQVVINQ----DDLIEMG---SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           +    D     I+     ++ +  G       + + +  G  +R +        P +   
Sbjct: 68  DQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSGER 127

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
           +   HQGEE   VL+GE+++    +++ L  G++   N+ +PH
Sbjct: 128 KTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPH 170


>UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C2L3_9CLOT
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF----- 66
           L EIR+ + LS  + + L+ ++ S +S +E+ +V+P IST+ KL     + ++ F     
Sbjct: 43  LKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLKVPVTAFTAPKP 102

Query: 67  --FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMI-FETYQPGTTTGER 123
             FS+  K +   +V   DD          +  V +    +   +  FE  + G   G R
Sbjct: 103 TPFSQTSKAEVSPLV--SDD------GRYRLYPVFSFRDGQDFEIFDFEFDEGGQMAGNR 154

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISAHTP 182
                 E  TV  G++ L    ++Y L AG S A N    + + NT  G I   I  H P
Sbjct: 155 QMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIVVHYP 214


>UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12
           Tax=Bacteria RepID=Q1AT52_RUBXD
          Length = 220

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  + + R ++GL+    +  + ++ S +S IE  + SP++ T+ +L +  G++LS  FS
Sbjct: 29  GNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVTLSTMFS 88

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVS-----MKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             + P +   ++     +E+  +G         L +N  P +       T +  + T   
Sbjct: 89  NYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNKSETFPT 148

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
            +H G E   +LEG++        Y L  G +   +  IPH
Sbjct: 149 FEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPH 189


>UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces
           RepID=B5HZF0_9ACTO
          Length = 201

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 1/164 (0%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            + +   R ++G +    A  +G++   +  IEQ + +P++ T+ K+    G+S++    
Sbjct: 23  ARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALGISITTLLD 82

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             + P    V   Q   +     G   +L+        L M      PG ++       G
Sbjct: 83  YEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESSPSDPHPTG 142

Query: 129 E-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
             E+  V+ GE+ LT++G ++ + AG S +     PH++ N  A
Sbjct: 143 TVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGA 186


>UniRef50_A4XJD0 Transcriptional regulator, XRE family n=1
          Tax=Caldicellulosiruptor saccharolyticus DSM 8903
          RepID=A4XJD0_CALS8
          Length = 103

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GK++ E+R+Q+  SQ + A  +G++ SA+S IE+    P + TL  +     ++L +FFS
Sbjct: 4  GKKIKELRKQKKWSQEKLAAEAGISQSALSAIERGIKQPTVETLNNICNALNITLVDFFS 63

Query: 69 EPEKPDEPQVVINQDDLIEMGSQGVSMKL 97
          E +    P ++    +LI + S+    KL
Sbjct: 64 EEKTELSPALL----ELINVASKMPENKL 88


>UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Actinobacteria
           (class) RepID=A6W7Y3_KINRD
          Length = 232

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 11/183 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL   R  Q  +    AE SGLT   +S +E+D+ + +++ L +L     L++   F 
Sbjct: 44  GSRLRAARLAQRRTVAEVAEASGLTKGFLSRLERDRATASVAALVRLCATLDLAVGSLF- 102

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQ 127
           EP    E  V       I  G  G+   L+      R +A+I     PG  +G E     
Sbjct: 103 EPAPAGE-VVRAGHYPPITFGGHGLRESLLTPAG-ERRVAVIVSDLDPGGGSGAEPYALD 160

Query: 128 GE-EIGTVLEGEIVLTING------QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            + E   VL GE+ L   G      +   L AG +   +    HSF  T     R++   
Sbjct: 161 ADVEFALVLAGEVELRFAGPAGSPAEAVVLRAGDALTFDPARAHSFRGTGETPARVLWVV 220

Query: 181 TPT 183
           +P 
Sbjct: 221 SPA 223


>UniRef50_C5CT85 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CT85_VARPS
          Length = 262

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 8/176 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL   R++ G +  + AE SG++ + IS  E+ +++        L +   + ++  F+
Sbjct: 44  GHRLRAARKRFGWTLAQLAERSGVSITTISRAERGQLALGYENFTALGRALEMDMNAMFA 103

Query: 69  ----EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG--E 122
               +P + D P V      ++  G   ++ + +      + ++ I  T       G  +
Sbjct: 104 GAGVKPAQLDGPVVTRAGKGVVYRGLS-IAYEFLGTTAAGKQMSPIVGTVHARRIHGPED 162

Query: 123 RIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            ++H GEE   VL GEI +   NG+  HL  G S   ++ + H++ + S  + +I+
Sbjct: 163 FVRHAGEEFAYVLSGEIEVHFENGEVVHLARGDSLYFDSRLGHAYVSVSRQLAKIV 218


>UniRef50_Q0K2B1 Putative uncharacterized protein h16_B1072 n=1 Tax=Ralstonia
           eutropha H16 RepID=Q0K2B1_RALEH
          Length = 129

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 90  SQGVSMKLVHNGN---PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ 146
           S G++  LV   +   P R   +      PGT  G R  H G+EI  V+EGE+ L I+GQ
Sbjct: 23  SSGLTRTLVGRADVSVPGREAVVARVEVAPGTYAG-RHTHPGDEISYVMEGEVQLLIDGQ 81

Query: 147 DYHLV-AGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               V AG+S+ +  G+ H   N S+   R++  + 
Sbjct: 82  SPRTVKAGESFVVPAGVVHDAHNNSSAAARVLGVYV 117


>UniRef50_C6WEH6 Cupin 2 conserved barrel domain protein n=3 Tax=Actinomycetales
           RepID=C6WEH6_ACTMD
          Length = 166

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%)

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           +H  EE+ TVLEGEI  T  G+ + + AG +  I    PH+F NTS    R++   TP
Sbjct: 61  RHDFEEMFTVLEGEIEFTFRGEKHVVPAGTTINIPANAPHNFRNTSGAPARMLCMCTP 118


>UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Gammaproteobacteria
           RepID=A6VVG9_MARMS
          Length = 176

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+ + ++R  +GLS  + A  +GL  S +S IEQ + +P + T+ +L     +   +  +
Sbjct: 10  GRNIQKMRMAKGLSLSQLALDAGLAKSNLSRIEQGEGNPTLETIWRLAVQLNVPFGDLVA 69

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             E                +G  GV ++L+  G  N  L + + +  P T         G
Sbjct: 70  TVES--------------TLGENGVQVRLIDQGEDNPRLDVYWMSCAPNTIKQSEPHIAG 115

Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
             E  T++ G+++   N    HL  G+++     +PHS+
Sbjct: 116 TTETITLISGKLLAGENNDLRHLEIGKAHTFAADVPHSY 154


>UniRef50_Q1AYH0 Transcriptional regulator, XRE family n=1 Tax=Rubrobacter
          xylanophilus DSM 9941 RepID=Q1AYH0_RUBXD
          Length = 134

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G +L ++R+Q G SQ   A  SG+  + IS IE  K  P+ ST++KL    G+ ++E + 
Sbjct: 2  GPKLRQLRRQMGWSQHELARRSGVDRATISAIESGKRDPSGSTMRKLADALGVPVAELYK 61

Query: 69 EP 70
          EP
Sbjct: 62 EP 63


>UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM
          Length = 183

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 22/178 (12%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL---LKV-YGLSLS 64
            + L  +R ++ LS  + AELS ++   +S IE+   +P I+TL K+   LKV Y L L 
Sbjct: 8   AENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVPYTLLL- 66

Query: 65  EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGN-PNRTLAMIFETYQPGTTTGE 122
                 E+ +    +I + +L  ++  +G      +  N P R     FE +Q     G 
Sbjct: 67  ------EQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRN----FELFQIELDEGC 116

Query: 123 RIKHQG-----EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
             +  G     EE   VLEGE+ L +N + Y L    S + +    H +SN   G  +
Sbjct: 117 SYRSVGHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLK 174


>UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34
           Tax=Alphaproteobacteria RepID=B2S813_BRUA1
          Length = 650

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 13/161 (8%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L+ +R+++GL+    AELS ++ +AIS +E    +P + TL  L    G+   E   
Sbjct: 8   GMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALGIEFGE--- 64

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTL-AMIFETYQPGTTTGERIKHQ 127
                    +V  ++D+  + + G+S++L+      RT+ A + +         +   H 
Sbjct: 65  ---------LVGARNDVEVVEADGISVRLIDRQTRPRTVEAFLLDLPANAKRHADAHVHG 115

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
             E   VL G I +        L AGQS+     +PH +S+
Sbjct: 116 VSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSS 156


>UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2150 RepID=A3JV98_9RHOB
          Length = 195

 Score = 49.3 bits (116), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 5/166 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +R ++ L   +    + L+   +S IE+ +V P + TL ++  V+G+ L  FF 
Sbjct: 16  GQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGLEHFFE 75

Query: 69  EPEKPD----EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           E + P       +  +   D +E         L    N +R +      + P     E  
Sbjct: 76  EGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVN-DRPIDSFLSEFVPRAKASEPH 134

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           +H+G E+  V+ G + + I+   + L A  S   +   PHS+   S
Sbjct: 135 EHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCAS 180


>UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus
           RepID=A0RIX6_BACAH
          Length = 237

 Score = 49.3 bits (116), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  + EIRQ++G++  +  E +GL+   +S +E +K SP+ISTL+        ++S F +
Sbjct: 60  GSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLE--------TISNFLN 111

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE--------TYQPGTTT 120
            P     P +++ Q D +++  + V  K    G   + +  + E           P    
Sbjct: 112 VP----LPYLLLEQKDRLKV-VKKVERKYSVYGKDEQRIEHVAEQGGLRLNLVEIPAGFP 166

Query: 121 GERI--KHQGEEIGTVLEGEIVLTINGQDYHLV-AGQSYAINTGIPHSFSN 168
            E     H+GEE   VL G++ +  +G+D  +V  G S++ N  +PH   N
Sbjct: 167 KENTPNAHEGEECHLVLRGKLEVQ-HGEDVAIVEEGDSFSWNACVPHIVRN 216


>UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LD32_RALME
          Length = 251

 Score = 49.3 bits (116), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 6/179 (3%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKRL   R+  G +    AELSG++ + IS  E+ +++        + K   + + E F+
Sbjct: 22  GKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEMFA 81

Query: 69  ---EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124
              E   P +  +V   +  +    Q ++ + +      + ++    T      TG  + 
Sbjct: 82  GAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPEVF 141

Query: 125 -KHQGEEIGTVLEGEI-VLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             H GEE   VL GE+ V   NG+   L  G S   +  + H++ + S  + R I   T
Sbjct: 142 ASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVTT 200


>UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TR92_9PROT
          Length = 190

 Score = 48.9 bits (115), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 22/171 (12%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +RL  +R ++G S  + A  S ++ + +S +E  +VSP  + L KL  VYGL++S    
Sbjct: 16  AQRLKGLRAERGWSLDQLATRSAISRATLSRLENAEVSPTANVLGKLCAVYGLTMSRLMH 75

Query: 69  --EPEKP----DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
             E E P     E Q V N D  I    + VS        P +TLA   E  +     G 
Sbjct: 76  MVEGEFPALVRGEAQAVWN-DPEIGFRRRSVS-------PPAQTLAA--EALECEIDPGT 125

Query: 123 RIKHQG------EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFS 167
           RI +        E    ++ G++ +T+ GQ Y+L  G         P +F+
Sbjct: 126 RITYDEPPRPGLEHHLLMVNGKLAVTVGGQTYNLHPGDCLRYQLFGPSAFA 176


>UniRef50_Q1GEM6 Transcriptional regulator, XRE family with cupin sensor n=4
           Tax=Rhodobacteraceae RepID=Q1GEM6_SILST
          Length = 239

 Score = 48.9 bits (115), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G+R+  +R   G++  +AAE + L  S I  IE  KVSP+   L +L + YG+ L +
Sbjct: 53  LELGRRVKGLRSAAGMTLEQAAERTRLAVSTIYKIENGKVSPSFENLLRLARGYGVGLEK 112

Query: 66  FFSEPE 71
             +EPE
Sbjct: 113 LIAEPE 118


>UniRef50_A7K1Q3 Predicted transcriptional regulator n=1 Tax=Vibrio sp. Ex25
          RepID=A7K1Q3_VIBSE
          Length = 84

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 35/58 (60%)

Query: 6  LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
          LA    + E RQ  GL+Q++A+ELSGL  + IS IE +  S  I TL  L +VY L L
Sbjct: 7  LALANWMREARQNSGLTQKQASELSGLRQATISKIENEPASCTIETLLCLARVYQLEL 64


>UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium
           vanbaalenii PYR-1 RepID=A1T298_MYCVP
          Length = 180

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +RQ++G++    A  +GLT S +S +E+ +  P+I+   K+ +   + +++ FS   
Sbjct: 5   LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFS--- 61

Query: 72  KPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGT--TTGERIKH 126
             D+P+V  I+ D   E G+        H+    R L      +  +PG   TT     H
Sbjct: 62  --DDPEVSTISVDRAAERGADR------HHAVAARMLGKEMSPFVVRPGRTFTTHPHPTH 113

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSF 166
            G+E   V  G + L+ +G+   L AG     +   PH  
Sbjct: 114 LGQEFIFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKL 153


>UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin sensor n=21
           Tax=Rhodobacterales RepID=Q1GC59_SILST
          Length = 188

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 22/144 (15%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           RL E R+ QGLS    A LSG++ S +S IE+ + SP I+TL  L +   +  +      
Sbjct: 15  RLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQVDFAGLLEAG 74

Query: 71  EKPDEPQVVINQD-DLIEMGSQGVSMKL-----------VHNGNPNRTLAMIFETYQPGT 118
           E  D   V+  +D  +I+  +   ++ +           V++ +     A+I + + PGT
Sbjct: 75  EAADRIDVLRARDVPVIDSKAAHCTIAILSPPEDVGGHEVYDISFASGGALISQPHAPGT 134

Query: 119 TTGERIKHQGEEIGTVLEGEIVLT 142
                      E  TVLEG +VLT
Sbjct: 135 ----------REQLTVLEGRVVLT 148


>UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=Bacteria
           RepID=A9ADC6_BURM1
          Length = 224

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF- 67
            +R+ E+R  +G +    A   G++ S IS IE+   SP    L KL    G+SL+  F 
Sbjct: 38  ARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVVLDKLAAGLGISLAGLFG 97

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMK-LVHNGNPNRTLAMIFETYQPGT----TTGE 122
            +   P +P V   Q       + G + + L   G P+  L ++   + PG      TG 
Sbjct: 98  GDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPS-PLQLVEVDFPPGARVAYDTGA 156

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           R     ++I  V+ G I +T+    + L  G   A+    P  FSN S    R I A
Sbjct: 157 REIAWHQQI-WVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVA 212


>UniRef50_A7AYS6 Putative uncharacterized protein n=2 Tax=Ruminococcus
           RepID=A7AYS6_RUMGN
          Length = 106

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M  E   P KR+ E+  +  +S+ R A+L+ ++ +A+  I + +  P I TL+++   +G
Sbjct: 1   MRTEDYIP-KRVKELCSKHKVSKYRLAQLTDMSQTALGNIIKKESIPTIPTLERICDAFG 59

Query: 61  LSLSEFFS----EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN 100
           +SL++FF+     P+  DE + ++   D +    + + M  V +
Sbjct: 60  ISLAQFFAGDGMRPDLTDEQEEILETWDNLNADERRILMNFVRS 103


>UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31672
          Length = 196

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 8/179 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+  +R+   LS R  AE SG++   +S +E+ + SP +    ++     L LS+   
Sbjct: 13  GSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQLLR 72

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GERIK 125
             E+     V + +         G   +++    P +   +      PGT T   G+   
Sbjct: 73  LDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDPPV 132

Query: 126 HQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS---AGICRIISA 179
           H+    E   +  G +VL  +G  Y L AG +   +  +PH F N     A +  ++SA
Sbjct: 133 HEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVSA 191


>UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes
           RepID=D1YD37_PROAC
          Length = 258

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 11/174 (6%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ + R  +  +  + A  +G++   +  +EQ  V+P + TL +L    G+ L     
Sbjct: 77  GARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGVGLPALV- 135

Query: 69  EPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           EP     P++  N Q   +  G  G    LV    P   + +   T  P     ER   +
Sbjct: 136 EPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAP----SERHDSE 191

Query: 128 GEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
               GT     V EG + + ++G  Y L  G + +      H++ N++    R 
Sbjct: 192 AHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARF 245


>UniRef50_C1TKU3 SOS response transcriptional repressor, RecA-mediated
          autopeptidase n=1 Tax=Dethiosulfovibrio peptidovorans
          DSM 11002 RepID=C1TKU3_9BACT
          Length = 234

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query: 6  LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
          +  G+RL  +R+ QGL+Q   A LSG+  + +S +E D++  +I T + L  V G S+  
Sbjct: 1  MTRGERLRRVRKDQGLTQTELARLSGVKQNTVSQVENDRIGLSIETWESLASVLGCSVGY 60

Query: 66 FFS 68
            S
Sbjct: 61 LVS 63


>UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica
           RepID=B5FUU1_SALDC
          Length = 185

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 11/161 (6%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +R Q+G S  R AE+SG++ + +  IE+++ SP ++TL K+     +  S F S P+
Sbjct: 19  LRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSMFISPPQ 78

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131
               P     Q        Q + +  +   +P            PGT + E   H+   I
Sbjct: 79  AEFPPTFDPQQ--------QAMVITPLFPWDPELCFDYFSLLLAPGTVS-ESTPHKAGVI 129

Query: 132 G--TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
               V++G + +   G    + AG+         H++ N+S
Sbjct: 130 EHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSS 170


>UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia
          heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD
          Length = 459

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 10 KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
          +RL+E+R+ +GLSQ   A   GL+  A+S  E+ + SP    L  L K+YG++L E    
Sbjct: 7  ERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPDTDNLIALAKLYGMTLDELVHG 66

Query: 70 P 70
          P
Sbjct: 67 P 67


>UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia
           RepID=B2T7X7_BURPP
          Length = 212

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 8/174 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+++  +R ++ ++    +  +G++ S +S IE+DK +P I+   +L    G+SL   F+
Sbjct: 36  GEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLFA 95

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
            P+K  E   V    ++  +       +L   G     LA  FE Y+     G  +    
Sbjct: 96  -PQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIE--LAGKFEWYELTLQPGGALVSNA 152

Query: 129 EEIG-----TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            E G     TVL+G I +   G    L A  +       PH+  N   G  + +
Sbjct: 153 HEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKAL 206


>UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TWQ8_9PROT
          Length = 195

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           + ++ +R  Q LS  + A  +G++   +  IEQ + +P I+TL +L    G+++ +  +E
Sbjct: 15  RNVALLRHGQRLSYEQLARRAGVSKGVVVQIEQARSNPNIATLCRLASALGVAVVDLLAE 74

Query: 70  PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN-PNRTLAMIFETYQPGTTTGERIKHQG 128
                   V  ++  ++  G  G + +L+     P+     + E ++     GER     
Sbjct: 75  DSGAGVRVVRADEVPVLWSGPNGGTARLLAGTRGPD-----MLELWEWVLHAGERYDGAA 129

Query: 129 EEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              GT     V+EG + + ++GQ   L AG          H++   S  +   ++ H P
Sbjct: 130 HAAGTREIVHVVEGVLAIEVDGQRIDLAAGDGMTFAGDRRHAYLAVSDLVRFTMAVHEP 188


>UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales RepID=C0Z4P6_BREBN
          Length = 189

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 16/172 (9%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G  L +IR+++ LS    +ELSG++   +  IE+ + +P I  L K+ K   + L  
Sbjct: 13  LQVGGVLKKIRKEKHLSLEDLSELSGVSKLTLGNIERGETNPTIGVLWKISKCLSIPLLA 72

Query: 66  FFSEPEKPDEPQVVI-------NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
            FS     +  +          N+D +IE   Q VS ++       R       +Y P  
Sbjct: 73  LFSTENSVNLSRAGKGLRIAGDNKDWVIEPIFQNVSNEI----ETCRAYLQPNSSYYP-- 126

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
              E+  H   EI TV+ G + + +N + Y L    S +      HS+ N S
Sbjct: 127 ---EKHHHNTTEIATVMSGTLSIHVNNESYVLNQYDSISFCADGTHSYINQS 175


>UniRef50_C7LUL3 Helix-turn-helix domain protein n=1 Tax=Desulfomicrobium
          baculatum DSM 4028 RepID=C7LUL3_DESBD
          Length = 355

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G+RL   R+   LS R  AE  G++H+ I+  E+D+  P   TL KL KV G+  SE+F 
Sbjct: 3  GERLQRARKAADLSLRNLAEQVGVSHTWINKFEKDQAMPDSKTLLKLGKVLGVR-SEYFF 61

Query: 69 EPEKPDEPQV 78
           PE+    QV
Sbjct: 62 RPEQVTLSQV 71


>UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54
           Tax=Enterobacteriaceae RepID=YDCN_ECOLI
          Length = 178

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L ++RQQ+G S  R AE +G++ + +  IE+++ SP ++TL K+     +  S F S P+
Sbjct: 12  LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131
               P V   Q        Q + +  +   +P     + FE +     +G   +    E 
Sbjct: 72  SAT-PSVYDPQQ-------QAMVITSLFPYDPQ----LCFEHFSIQMASGAISESTPHEK 119

Query: 132 G-----TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN 168
           G      V++G++ L ++G+   L  G+       + H + N
Sbjct: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161


>UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria
           RepID=A6UEP3_SINMW
          Length = 234

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 12/168 (7%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +A G  +   R++ G++    A  + ++   +S IE    SP+++TLQ L +  G+ ++ 
Sbjct: 45  VAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPITA 104

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMK-----LVHNGNPNRTLAMIFETYQPGTTT 120
           FF   E+ +   V +   + +++  +G         L H G  + T  ++ E Y    T 
Sbjct: 105 FFRRFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIG--SNTSGVVVEPYLITLTE 161

Query: 121 GERI----KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
              I    +H G E   +LEGE+V       Y +  G S   +   PH
Sbjct: 162 NSDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPH 209


>UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JMT2_AGRRK
          Length = 200

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 30/150 (20%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           GKR+  +R    ++ +  +  SG++ SAIS IE +++SP    + KL +  G+ +SE FS
Sbjct: 15  GKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDISELFS 74

Query: 69  EPEK-----------PDEPQVVINQDDLIEM------GSQGVSMKLVHNGNPNRTLAMIF 111
           +P K             + +++  +  + EM      G + + +K     +  R      
Sbjct: 75  DPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRDF---- 130

Query: 112 ETYQPGTTTGERIKHQGEEIGTVLEGEIVL 141
                    G+ I H GEEI  VL G + L
Sbjct: 131 ---------GKLIAHVGEEIVVVLSGRVEL 151


>UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145
           RepID=A3WK19_9GAMM
          Length = 174

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
            +RL ++R+ +G S    AE +G++ + +  IE+ + SP ++TL KL   + +SLS   +
Sbjct: 9   ARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFNVSLSWLLN 68

Query: 69  EPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           + ++P   D     I  + L+    Q                    E Y+     G +  
Sbjct: 69  DEQQPMTFDFAHERIQVERLLAFDPQTQQ-----------------EVYKLCMAEGAQSH 111

Query: 126 HQGEEIGT-----VLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
                 GT     V  G + + +      + AG++Y  +   PHS+ N  +G
Sbjct: 112 SDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSG 163


>UniRef50_D1WPC0 DNA-binding protein n=1 Tax=Staphylococcus epidermidis SK135
          RepID=D1WPC0_STAEP
          Length = 96

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          G +L  +R+ + L+Q   AE + L+   IS IE +  SP++ T   L++V G S S+FF 
Sbjct: 4  GYKLRNLRRIKNLTQEELAERTDLSKGYISQIESNHASPSMETFLNLIEVLGTSASDFFK 63

Query: 69 EP 70
          EP
Sbjct: 64 EP 65


>UniRef50_B9MPV1 Transcriptional regulator, XRE family n=2 Tax=Clostridia
          RepID=B9MPV1_ANATD
          Length = 118

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 9  GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
          GKRL E+R+Q+G +Q + A+  G+T   +S  E  K   ++  L +L ++YG   +    
Sbjct: 10 GKRLQELRKQRGFTQEQVAKYLGITQEQLSHYENGKREVSVDILLQLARLYGCDYNYLLG 69

Query: 69 EPEKPDEPQVVIN 81
          E +  DE Q+ +N
Sbjct: 70 EEQNTDE-QITMN 81


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax...   245   7e-64
UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C...   201   8e-51
UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin...   200   2e-50
UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q...   197   1e-49
UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin...   197   1e-49
UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni...   196   2e-49
UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi...   195   5e-49
UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti...   192   6e-48
UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax...   191   7e-48
UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin...   189   3e-47
UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI...   189   4e-47
UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M...   188   8e-47
UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni...   188   1e-46
UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B...   187   2e-46
UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin...   187   2e-46
UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De...   187   2e-46
UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo...   186   2e-46
UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ...   186   4e-46
UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost...   185   9e-46
UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin...   184   1e-45
UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl...   184   1e-45
UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl...   184   1e-45
UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th...   183   2e-45
UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P...   183   4e-45
UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=...   182   4e-45
UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re...   181   1e-44
UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea...   180   2e-44
UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=...   179   4e-44
UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte...   178   6e-44
UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga...   178   6e-44
UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob...   178   6e-44
UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F...   176   3e-43
UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro...   176   4e-43
UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7...   175   6e-43
UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum...   175   7e-43
UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax...   175   8e-43
UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P...   175   9e-43
UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu...   174   1e-42
UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax...   174   1e-42
UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin...   173   2e-42
UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B...   173   2e-42
UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C...   173   3e-42
UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin...   173   3e-42
UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7...   172   6e-42
UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be...   171   7e-42
UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi...   171   8e-42
UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo...   171   1e-41
UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci...   170   3e-41
UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=...   169   3e-41
UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag...   169   5e-41
UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch...   168   6e-41
UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al...   168   6e-41
UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh...   168   7e-41
UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ...   168   7e-41
UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ...   167   1e-40
UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob...   167   1e-40
UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh...   166   3e-40
UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot...   166   3e-40
UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R...   166   3e-40
UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin...   166   3e-40
UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar...   166   3e-40
UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin...   166   4e-40
UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi...   165   5e-40
UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac...   165   6e-40
UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D...   165   7e-40
UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De...   165   1e-39
UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin...   164   1e-39
UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do...   163   2e-39
UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill...   163   3e-39
UniRef50_A5V718 Transcriptional regulator, XRE family with cupin...   163   3e-39
UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin...   163   4e-39
UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ...   161   7e-39
UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid...   161   9e-39
UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B...   161   1e-38
UniRef50_A8U412 Transcriptional regulator, XRE family with cupin...   160   2e-38
UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba...   160   3e-38
UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De...   160   3e-38
UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa...   160   3e-38
UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin...   160   3e-38
UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax...   160   3e-38
UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein...   159   4e-38
UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo...   159   4e-38
UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria...   159   4e-38
UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh...   159   4e-38
UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph...   159   5e-38
UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu...   159   5e-38
UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni...   158   6e-38
UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin...   158   6e-38
UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin...   158   6e-38
UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin...   158   7e-38
UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F...   158   7e-38
UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa...   158   7e-38
UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost...   158   8e-38
UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator...   158   1e-37
UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein...   157   1e-37
UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid...   157   2e-37
UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro...   156   3e-37
UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean...   156   3e-37
UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De...   156   4e-37
UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Mari...   156   5e-37
UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge...   155   5e-37
UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th...   155   6e-37
UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax...   155   7e-37
UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy...   155   8e-37
UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein...   155   8e-37
UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord...   155   8e-37
UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B...   155   1e-36
UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella ...   154   1e-36
UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re...   154   1e-36
UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax...   154   1e-36
UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba...   154   1e-36
UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax...   154   2e-36
UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0...   154   2e-36
UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh...   153   2e-36
UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax...   153   2e-36
UniRef50_D2BA96 Putative transcriptional regulator, XRE family n...   153   2e-36
UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Co...   153   2e-36
UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin...   153   3e-36
UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ...   153   4e-36
UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n...   153   4e-36
UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1...   152   4e-36
UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri...   152   5e-36
UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin...   152   5e-36
UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID...   152   5e-36
UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco...   152   5e-36
UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostri...   152   6e-36
UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi...   152   6e-36
UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1...   151   7e-36
UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh...   151   1e-35
UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B...   151   1e-35
UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde...   151   1e-35
UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca...   150   2e-35
UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=...   150   2e-35
UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi...   150   2e-35
UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh...   150   3e-35
UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0...   149   3e-35
UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre...   149   4e-35
UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba...   149   5e-35
UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostri...   149   5e-35
UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat...   148   6e-35
UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba...   148   6e-35
UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me...   148   6e-35
UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De...   148   7e-35
UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ...   148   8e-35
UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc...   148   8e-35
UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin...   148   1e-34
UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I1...   148   1e-34
UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De...   147   1e-34
UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=De...   147   2e-34
UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax...   147   2e-34
UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr...   146   2e-34
UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jo...   146   3e-34
UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S...   146   3e-34
UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac...   146   3e-34
UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost...   146   3e-34
UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin...   146   4e-34
UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvima...   146   4e-34
UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Na...   146   4e-34
UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B...   146   5e-34
UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin...   145   8e-34
UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi...   145   8e-34
UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu...   144   9e-34
UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me...   144   1e-33
UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl...   144   1e-33
UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi...   144   1e-33
UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De...   144   1e-33
UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=...   144   1e-33
UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th...   144   2e-33
UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax...   144   2e-33
UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1...   144   2e-33
UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat...   143   2e-33
UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh...   143   2e-33
UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter...   143   3e-33
UniRef50_C9XPQ5 Putative transcriptional regulator (Putative unc...   143   3e-33
UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coproco...   143   3e-33
UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa...   143   4e-33
UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=De...   142   5e-33
UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a...   142   5e-33
UniRef50_C5ENH1 Transcriptional regulator n=1 Tax=Clostridiales ...   142   5e-33
UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=R...   142   6e-33
UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin...   142   6e-33
UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=...   142   7e-33
UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De...   142   7e-33
UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S...   141   1e-32
UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chlorofl...   141   1e-32
UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My...   140   2e-32
UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=De...   140   2e-32
UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Fla...   140   2e-32
UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro...   140   2e-32
UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang...   140   2e-32
UniRef50_A9DT77 Transcriptional regulator, XRE family with cupin...   140   3e-32
UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin...   139   3e-32
UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=...   139   5e-32
UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp...   139   6e-32
UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Pa...   139   6e-32
UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin...   138   7e-32
UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B...   138   1e-31
UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=F...   138   1e-31
UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma...   138   1e-31
UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A...   138   1e-31
UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr...   138   1e-31
UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=...   137   2e-31
UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Maripro...   136   3e-31
UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R...   136   3e-31
UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Ac...   136   3e-31
UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Pa...   136   5e-31
UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac...   136   5e-31
UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 ...   135   6e-31
UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burne...   135   6e-31

Sequences not found previously or not previously below threshold:

UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh...   170   2e-41
UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD    156   4e-37
UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill...   155   8e-37
UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium sm...   154   2e-36
UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu...   153   2e-36
UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl...   153   2e-36
UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI...   149   4e-35
UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin...   149   4e-35
UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil...   149   5e-35
UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B...   147   2e-34
UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein...   146   3e-34
UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=...   146   4e-34
UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ...   145   6e-34
UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 ...   145   7e-34
UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe...   144   1e-33
UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha...   144   1e-33
UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Ac...   143   2e-33
UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu...   143   3e-33
UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacusca...   142   4e-33
UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rh...   142   5e-33
UniRef50_C3JHD6 Transcriptional regulator, XRE family n=2 Tax=Rh...   142   6e-33
UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin...   141   8e-33
UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria...   141   8e-33
UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Bu...   141   1e-32
UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr...   141   1e-32
UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Vi...   140   2e-32
UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep...   140   2e-32
UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos...   140   3e-32
UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales Re...   139   3e-32
UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ...   139   4e-32
UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin...   139   5e-32
UniRef50_A9DXP7 Transcriptional regulator, XRE family with cupin...   139   5e-32
UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Ch...   138   6e-32
UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy...   138   7e-32
UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sph...   138   8e-32
UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax...   136   3e-31
UniRef50_A6G914 Transcriptional regulator, XRE family with cupin...   136   4e-31
UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De...   136   4e-31
UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B...   136   4e-31
UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cel...   136   5e-31
UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxid...   135   7e-31

>UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67
           Tax=Gammaproteobacteria RepID=PUUR_ECOLI
          Length = 185

 Score =  245 bits (625), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 185/185 (100%), Positives = 185/185 (100%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
Sbjct: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
Sbjct: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180

Query: 181 TPTTF 185
           TPTTF
Sbjct: 181 TPTTF 185


>UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ
          Length = 274

 Score =  201 bits (512), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 2/181 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +A G++L  +R+++GL+    ++ +G++ S +S IE  +V+ +I+TLQKL   Y  +L  
Sbjct: 95  IAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLY 154

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF   +  ++  V      ++E   +G+ ++L+   N    +  +  T  PG    E I 
Sbjct: 155 FFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALNEP-AMEPLLYTVAPGAGRNENIS 213

Query: 126 HQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           H+GEE   VL+G + + ++  + Y +  G S    +   H + N        +  +TP T
Sbjct: 214 HEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPPT 273

Query: 185 F 185
           F
Sbjct: 274 F 274


>UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132
           Tax=Proteobacteria RepID=A0KZV5_SHESA
          Length = 208

 Score =  200 bits (509), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G  L  +R+ +GLSQR  A+ +G+T+S IS IE++ VSP++S+L+K+L    +SL 
Sbjct: 26  NLDIGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLV 85

Query: 65  EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           +FFS E     E +VV   D+L+++G+  +  KL+    PNR ++++ ETY PG+ TGE 
Sbjct: 86  DFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEE 145

Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           + KH+GEE   V+EG+  LT+  + Y L AG SY  N+ +PH F N     CR++SA TP
Sbjct: 146 MLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTP 205

Query: 183 TTF 185
             F
Sbjct: 206 ANF 208


>UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5
          Length = 208

 Score =  197 bits (502), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+  +R+++GL+    A+ S LT   IS +E++   P+I  L  + +  G+++  FF
Sbjct: 29  LGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFF 88

Query: 68  SEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           +   +  P++   V+ +   +++  +   +  +    P R L  +   + PGT + E   
Sbjct: 89  ASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYS 148

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G VL G   L +  + + L  G S++ ++  PH + N       ++   TP TF
Sbjct: 149 HEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208


>UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Clostridiales RepID=A3DDF7_CLOTH
          Length = 179

 Score =  197 bits (501), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 5/182 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G ++ ++R    ++Q   A+ + L+   IS IE D  SP+I+TL  +L+  G  L  
Sbjct: 1   MQIGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKT 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGV--SMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           FFS+ E   + Q+V  + D        +  +++ V   +    +  I  T QPG  + E 
Sbjct: 61  FFSDSE---DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLED 117

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H+GEE G V++G I + I  + Y +  G+S+   +   H   N      ++I   TP 
Sbjct: 118 HPHEGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPP 177

Query: 184 TF 185
           TF
Sbjct: 178 TF 179


>UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SMM2_9BACT
          Length = 182

 Score =  196 bits (499), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GK + E+R +  ++ R  A+ SG + S +S +E+D +SP +++L+K+    G++++ 
Sbjct: 1   MEFGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITS 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           FFS  +  +   +V+ +D  + +GS+   V  + + +   N  L  ++     G  +G+ 
Sbjct: 61  FFSGDDS-ETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDD 119

Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H GEE   V++G++ +T++G+   L  G S   N+ +PH + NT  G   ++  +TP
Sbjct: 120 YNIHLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTP 179

Query: 183 TTF 185
            TF
Sbjct: 180 PTF 182


>UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio
           RepID=A6CYI2_9VIBR
          Length = 185

 Score =  195 bits (497), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 96/180 (53%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK ++++R+++GLSQR  AE +G+THSAIS+IE  KVSP++S+LQK++ V+ LSLSEFF
Sbjct: 6   IGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSLSEFF 65

Query: 68  S-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           + E ++  E +VV+  +DLIE+GS+ VSMKLV+NG+  + +  + E Y P +TTG   IK
Sbjct: 66  TLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGASNIK 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE+GTVL GE+ L  NG+ Y + AG+SY I+T IPH F+N S   CR+ISAHTP  F
Sbjct: 126 HEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHTPKAF 185


>UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans
           SI85-9A1 RepID=Q1YMV2_MOBAS
          Length = 193

 Score =  192 bits (488), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G++L  +R    LS ++ A   G + S +S +E  +V+P ++ L+KL+   G++++
Sbjct: 9   PQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGINIA 68

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             F   ++         +  +I +G      G+ ++ +    P   L        PG +T
Sbjct: 69  FLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPGGST 128

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                H GEEIG VLEG   LT+ G  + L  G S+A  +  PH + N    + R++  +
Sbjct: 129 DGAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVLWVN 188

Query: 181 TPTTF 185
           TP TF
Sbjct: 189 TPPTF 193


>UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae
           RepID=A5IJD1_THEP1
          Length = 188

 Score =  191 bits (487), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G++L ++R  +GL+Q   AE + L+ S IS +E DK SP+I TL+++L+  G  L  
Sbjct: 13  VRIGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKH 72

Query: 66  FFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           FFS+ E   E +VV  +++ + +    +GV  +++ +G  ++ +  I  T +PG  T E 
Sbjct: 73  FFSDVE---EERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEE 129

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             H+G E G V++G I L ++ + Y L  G  +       H   N+      ++   
Sbjct: 130 SYHEGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186


>UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=C3MAN4_RHISN
          Length = 220

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 4/183 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R    LSQR  A+ +G+T+S IS IE +  +P++  L+++L    + L+
Sbjct: 40  SVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLA 99

Query: 65  EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE- 122
           EFFS EPE+P   +     ++L+E+G   +S + + +    R+L ++ E YQPG  TG+ 
Sbjct: 100 EFFSFEPERP--RKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKV 157

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            + H+GEE G VL G + +T++ +   L  G +Y   +  PH F       C +ISA TP
Sbjct: 158 LLVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTP 217

Query: 183 TTF 185
            TF
Sbjct: 218 PTF 220


>UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14
          Length = 203

 Score =  189 bits (480), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 2/182 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G RL  +R+   LSQR  A  SG+T++ IS IEQ++VSP+IS+L+KLL+   ++L++
Sbjct: 22  MDTGARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLAD 81

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124
           FF+  + P + Q V    D  ++G  GV + LV    P+R +  + E Y PG  +GE   
Sbjct: 82  FFTFDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPI 141

Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
              +GEE G V  G + LTI+GQ   L  G  Y   T +PH F N       IIS++TP 
Sbjct: 142 VHSEGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPA 201

Query: 184 TF 185
            F
Sbjct: 202 NF 203


>UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA
          Length = 178

 Score =  188 bits (478), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK++ ++R+++G+S +  AE +GLT S +S +E+D   P+I++L+K+ +   + +  F 
Sbjct: 2   LGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFL 61

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126
             PE    P V  +Q  ++      ++ +L+     NR + ++    +PG  +  E + H
Sbjct: 62  LNPEDHS-PVVRKDQRKVLRFPQSHLTYELLSPDL-NRNMEVMMARLEPGAASCDEPLAH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VL+G + + I G+ + +  G S      IPH   +        ISA TP  F
Sbjct: 120 PGEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178


>UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SJP6_9BACT
          Length = 178

 Score =  188 bits (477), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G +L EIR++  ++    ++ +G T S IS IE  K SP+I++L+K+    G ++SE
Sbjct: 1   MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124
            F   E       + +  D     ++ +SM  + +   NR +  I     P   TG +  
Sbjct: 61  LF---EDERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYY 117

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
            H GEE+G V+EG+I + I   +++L  G+    ++ +PH   N +          TP +
Sbjct: 118 HHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPPS 177

Query: 185 F 185
           F
Sbjct: 178 F 178


>UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria
           RepID=Q1IRF9_ACIBL
          Length = 292

 Score =  187 bits (475), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL  +R  +GLS  + AE  G++   +S IE+  +S +++TL+KL K Y L++ + 
Sbjct: 117 NVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDL 176

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           F   +      +V   +      S GV M+L+  GNP   +        PG  +G E   
Sbjct: 177 F--DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP--VMEPHLFHVAPGAGSGDEEYS 232

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE   VL G + L ++G++Y L  G S+   +  PH +SNT +    ++  +TP TF
Sbjct: 233 HEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPPTF 292


>UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1
           Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR
          Length = 182

 Score =  187 bits (475), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 2/180 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R   +R++ GLSQR  A+ +G+T+  IS IE + VSP++++L KLL     S++EF
Sbjct: 4   EIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           F+  E P   Q    +    E+G   +S + + + + +R + M+ ET  PG  TG E + 
Sbjct: 64  FAVDE-PKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLA 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+G+E G +++GE+ LT++ +   L  G SY  ++   H F NTS   C I+SA++P +F
Sbjct: 123 HEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182


>UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales
           RepID=Q3A2S3_PELCD
          Length = 188

 Score =  187 bits (475), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 5/185 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  L  G++L  +R    L+Q      + LT   IS +E D   P+I+TL+ +L V+G+S
Sbjct: 2   ERNLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVS 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQG--VSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + EFF++P   +   VV   D  ++  + G  + ++L+  G  NR +     T +PG   
Sbjct: 62  MQEFFTDPVDTE---VVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEM 118

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E+  H+GEE G VL G I + ++ + Y +   + +   +   HS  N   G  RI+   
Sbjct: 119 EEQDFHEGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVV 178

Query: 181 TPTTF 185
           TP TF
Sbjct: 179 TPPTF 183


>UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens
           ISM RepID=A3SMM9_9RHOB
          Length = 219

 Score =  186 bits (474), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS      G+ +  +R+ + L+    AE +GL+   IS IE+ +  P+++ L ++ +  G
Sbjct: 21  MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80

Query: 61  LSLSEFFSEPEKPD---------------EPQVVINQDDLIEMGSQGVSMKLVHNGNPNR 105
           +S+S FF  PE PD                  +V   +        G+  +L+  G   +
Sbjct: 81  VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140

Query: 106 TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHS 165
            L ++   + PG+       H+GEE G VL G + L +    + L AG S+A ++  PH 
Sbjct: 141 -LELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199

Query: 166 FSNTSAGICRIISAHTPTTF 185
           + N S     +I A TP +F
Sbjct: 200 YRNPSETETIVIWALTPPSF 219


>UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN
          Length = 185

 Score =  186 bits (472), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 5/184 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E +  G++L ++R ++GL+Q   A    L+   IS +E+D  SP+I+TL  +L+  G +L
Sbjct: 5   ELMNIGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNL 64

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM--KLVHNGNPNRTLAMIFETYQPGTTTG 121
            +FF+  E   E ++V +++D+ E     ++   + V        +  I  T +P     
Sbjct: 65  KDFFNNDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYK 121

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H+GEE G VL G + + +  + Y    G+S+       H  SN    + +++   T
Sbjct: 122 NDEPHEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVST 181

Query: 182 PTTF 185
           P  F
Sbjct: 182 PPYF 185


>UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile
           RepID=Q186J9_CLOD6
          Length = 187

 Score =  185 bits (469), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G ++  +R+ + +S    A+ S L+   IS IE++ V P+I  + K+ K   +++ 
Sbjct: 5   NIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALDINIG 64

Query: 65  EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-TGE 122
            FF E  + D   VV   +   I         +L+      + +  I  T    T    E
Sbjct: 65  YFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTHKNSE 124

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            + H+GEE G +++G++ +T+  ++Y L  G S+  N+ IPH + N    +C  + A TP
Sbjct: 125 FVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVWAMTP 184

Query: 183 TTF 185
            +F
Sbjct: 185 PSF 187


>UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=Q1GM81_SILST
          Length = 190

 Score =  184 bits (468), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +DE L  G RL  +R++  LSQR  A+ +G+ +S IS IE  K++P++  L+++L    +
Sbjct: 9   ADEDL--GPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPI 66

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           SLS+FF+  E   E       +DL E+G   VS+K V      R + +++ETY+ G  TG
Sbjct: 67  SLSDFFAF-EPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTG 125

Query: 122 E-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                H+GEE G VL G I +T+  Q   L  G +Y  ++  PH F       C ++SA 
Sbjct: 126 RVMYGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSAC 185

Query: 181 TPTTF 185
           TP TF
Sbjct: 186 TPPTF 190


>UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia
           RepID=B2A1T2_NATTJ
          Length = 192

 Score =  184 bits (468), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+ + ++RQ + L  +  +E +G++   +S IE+ +V  ++ +L K+ K   + L  F
Sbjct: 14  EIGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSF 73

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           F E  +     V       +++    V  +L+   + NR + M+  T + G     E++ 
Sbjct: 74  FEELNREKVSVVRKEDRKQLDIPRSNVIYQLLSP-DMNRKIEMLLVTLKSGEVEEHEKVT 132

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G V++G++ +T+  +   L  G S   ++ IPH F N        + A TP +F
Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192


>UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium
           carboxidivorans P7 RepID=C6PYK9_9CLOT
          Length = 181

 Score =  184 bits (467), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 5/181 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              +++ ++R+++ L+ +  +  +GL+ S +S +E +  S AI++L+K+    G++++ F
Sbjct: 4   EIAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERI 124
           F   E P+    ++  +D      +G + +   +    PNR L  +  T  P    G   
Sbjct: 64  F---EIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNF 120

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
            H GEE   VLEG + + I+  +Y++ AG S    +   H + N S    +I++  TP  
Sbjct: 121 SHPGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLI 180

Query: 185 F 185
           F
Sbjct: 181 F 181


>UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae
           TMO RepID=A8F3B6_THELT
          Length = 185

 Score =  183 bits (466), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+ E    G+++  +RQ + L+ R  A+LSG+T   IS IE  KVSP++STL+ +L   G
Sbjct: 1   MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60

Query: 61  LSLSEFFSEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
            ++     +       + +V  ++    + S G++ +L+   + N   +M     +PG  
Sbjct: 61  ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLS--SKNNAYSMFISYLEPGAD 118

Query: 120 TGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           + E    H+G E G V++GE+ +T+  +   L  G S    + IPH + N        + 
Sbjct: 119 SRESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVW 178

Query: 179 AHTPTTF 185
             +P +F
Sbjct: 179 VVSPPSF 185


>UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria
           RepID=B2JW16_BURP8
          Length = 234

 Score =  183 bits (464), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R  Q L+ +  AE +G + S +S +E    +P+++TL ++      +++   
Sbjct: 45  LGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIAALV 104

Query: 68  SEPEKPDEPQVVINQDDLIEMG------------SQGVSMKLVHNGNPNRTLAMIFETYQ 115
           S P     P    ++   +                  + ++ +    P + L       +
Sbjct: 105 SGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIHVLE 164

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           P   + E+I H GEE+G VLEGE+ LT+  + Y L AG S+   +  PHS+ N    I R
Sbjct: 165 PLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGDVITR 224

Query: 176 IISAHTPTTF 185
           ++  +TP TF
Sbjct: 225 VLWINTPPTF 234


>UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM
          Length = 183

 Score =  182 bits (463), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E +  GK++ + R + G+S R  A+ SGLT S +S IE+D V+P+I TL+ + +   + +
Sbjct: 2   EDINLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALDVPM 61

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
            +FF + E   +  V   ++  I      ++  L+       ++     +  PG T+G  
Sbjct: 62  FKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRG-SIEFCMMSIPPGLTSGRN 120

Query: 124 IK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            + H GEE+  V+ G + + + G  Y L  G S  I     H + N    + ++I A TP
Sbjct: 121 PQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFAITP 180

Query: 183 TTF 185
            +F
Sbjct: 181 PSF 183


>UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2
          Length = 201

 Score =  181 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+  +R+++ L+  R AE +G++   IS IE+   +P+ +TL +L     + + + 
Sbjct: 19  DLGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQL 78

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGV------SMKLVHNGNPNRTLAMIFETYQPG-TT 119
               E P+   VV+ +++   +   G+      S +L+     N  L   +    PG  T
Sbjct: 79  L---EAPESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDL-NGALEATWVVTPPGYDT 134

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIIS 178
           +     H GEE G VL G   + ++G  + L AG S    + IPH + N S    C  I 
Sbjct: 135 SATPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIW 194

Query: 179 AHTPTTF 185
             TP T+
Sbjct: 195 VSTPPTW 201


>UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica
           DFL-43 RepID=A9D7J9_9RHIZ
          Length = 205

 Score =  180 bits (457), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R   GL  +  A  +  + S +S +E   VSP+I+ L ++ KV  +++S
Sbjct: 21  DVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNIS 80

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             F+  E+            ++         G++++ +     +  L        PG  +
Sbjct: 81  GLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAAS 140

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              I+H+GEE+G V+EG + LT+  Q   L AG S+  ++  PHS+ N    + R++  +
Sbjct: 141 DGAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVN 200

Query: 181 TPTTF 185
           +P ++
Sbjct: 201 SPPSY 205


>UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1
          Length = 236

 Score =  179 bits (455), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +++ G+A G ++  +RQ+   +    A  +G++   +S +E+   SP+I++L  +    G
Sbjct: 53  LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           +++  F    E P E + V   D L              + N    R L  I     PG 
Sbjct: 113 VTVQYFV---ETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQ 169

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E   H GEE   V+EGE+ LT+ G+ + L AG S    + +PHS+ NT+     ++ 
Sbjct: 170 KRSEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVW 229

Query: 179 AHTPTTF 185
             TP  F
Sbjct: 230 VGTPRLF 236


>UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae
           RepID=Q5LWB9_SILPO
          Length = 193

 Score =  178 bits (453), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 5/183 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+ E+R+ +GL+ ++ A  +GL+   +S +E+    P++  L  +    G+ ++ F
Sbjct: 12  IIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWF 71

Query: 67  FSEPEK---PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122
           F +P+    P+   VV          S GV  +L+      + L +I  T+ PG  +G E
Sbjct: 72  FPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSGQ-LELIVTTFDPGAGSGAE 130

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H+GEE G ++EG++ +T+  +   L  G +    + IPH + N   G   +I A TP
Sbjct: 131 LYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTP 190

Query: 183 TTF 185
             +
Sbjct: 191 PYY 193


>UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KY58_9GAMM
          Length = 219

 Score =  178 bits (453), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           ++    + G  + ++R+ +G++    +++S L+   +S +E+    P+I  L  + +  G
Sbjct: 31  LAKTDRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALG 90

Query: 61  LSLSEFFSEPEKPDEPQ----VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           +++S FF      ++P     VV + +      + G+  +L+     +R + M+  T+ P
Sbjct: 91  VTISWFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNL-SRQIEMLKCTFPP 149

Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           GT++G+    HQGEE G +L G++ L I      L  G S+A  +   H ++N       
Sbjct: 150 GTSSGDVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETV 209

Query: 176 IISAHTPTTF 185
           +I   TP ++
Sbjct: 210 VIWTITPPSY 219


>UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JLN2_AGRRK
          Length = 205

 Score =  178 bits (453), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL   RQ  G++ +  A  +  + S +S IE  K SP++  L +L++V G ++   
Sbjct: 23  RLGTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWM 82

Query: 67  FSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
           F E +  +          LI +      +G+S++ +   +P   L       +PG  +  
Sbjct: 83  FEEADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAG 142

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            I+H GEE+G +L G I L +  + + L  G S+   + +PH + N       I   +TP
Sbjct: 143 PIQHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTP 202

Query: 183 TTF 185
            TF
Sbjct: 203 ATF 205


>UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium
           RepID=A5TRU5_FUSNP
          Length = 184

 Score =  176 bits (447), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 4/184 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G++L + R  +G+S R  A    L+ S +S IEQ K SP+I  L+K+     + ++ 
Sbjct: 1   MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAY 60

Query: 66  FFSEPEKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
              + E        I ++++  IE     + M ++ + N  + +  I         +G  
Sbjct: 61  LIEDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRD 120

Query: 124 IKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               G  EE   +LEGE+ + +  + Y L  G S    + + H F NTS    + +   +
Sbjct: 121 FYSHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVS 180

Query: 182 PTTF 185
           P TF
Sbjct: 181 PPTF 184


>UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces
           sp. AA4 RepID=UPI0001B57A23
          Length = 178

 Score =  176 bits (446), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+ E R  +GL+ R+ A+ +G++   IS +E+    P++ T++++ +V  + L   F EP
Sbjct: 5   RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64

Query: 71  EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-HQGE 129
           +  +E   VI  DD   + S   ++           L ++    +PG  + + ++ H  E
Sbjct: 65  D--EETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSE 122

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E   V+ G + + +  Q + L  G S   ++ +PH F N      R + + TP ++
Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178


>UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH
          Length = 181

 Score =  175 bits (444), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              +++  +R+++ L+ +  +E +GL+ S +S +E +  S AI++L+K+     + ++ F
Sbjct: 4   EIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F  PE   +  V   + ++ E+         +      R +  I          G +  H
Sbjct: 64  FKSPELH-KFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG I+  I+G++Y +  G S    + IPH  SN      +I++   P  F
Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181


>UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA
          Length = 210

 Score =  175 bits (444), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G+ +  +RQ+ GLS +  A  +GL++  IS +E+ +  P+I TL+ L     + +S
Sbjct: 23  DQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPIS 82

Query: 65  EFFSEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121
            FF   +  D  + ++ +    L+ + + GV  + +      + L +   T  PG ++G 
Sbjct: 83  YFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKGQ-LELYELTLNPGASSGT 141

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           + ++H GE+ G +L G + L ++ Q + L AG S+   + +PH F N +    R+I   T
Sbjct: 142 DFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201


>UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes
           RepID=A4J4T3_DESRM
          Length = 180

 Score =  175 bits (443), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           +++  +R Q+ ++ +  +E +GL+ S +S +E+   S AI++L+K+     + ++ FF+ 
Sbjct: 6   EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASFFAN 65

Query: 70  PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129
               +      ++    ++         +      R L  +  T+ PG        H GE
Sbjct: 66  YSNTN-FTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQPNTFCHPGE 124

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E   VLEG ++  ++G++  +  G +    + +PH + N      +++   TP  F
Sbjct: 125 EFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180


>UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria
           RepID=B1M0W6_METRJ
          Length = 186

 Score =  175 bits (443), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 6/186 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R + GLSQR  A+ +G+T+SAIS IE ++V+P++  L+++L    + ++
Sbjct: 2   SIDVGARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMA 61

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           EFF+   +P+        ++L E+G +     +S + V +    R L ++ E Y+PG  T
Sbjct: 62  EFFALEPEPERKAFFA-AEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADT 120

Query: 121 GE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G   + H+GEE G VL G + +T++ +   L  G +Y+ ++  PH F       C ++SA
Sbjct: 121 GRVPLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSA 180

Query: 180 HTPTTF 185
            TP +F
Sbjct: 181 CTPPSF 186


>UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67K52_SYMTH
          Length = 196

 Score =  174 bits (442), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G R+ + R Q+G++ +  AE SGL+   +  +E DK SP++  L +L    G+ ++ 
Sbjct: 8   MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124
                E+     V  N      M  +G+S++L+    P R+L M+     PG  T G+  
Sbjct: 68  LLISQEERAH-VVRANARQGYSMNGEGLSVQLLSA--PGRSLKMMLLELAPGAATGGDNH 124

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            H+GEE   VL+G +      ++  L  G S   N  IPH   N      RI+   T
Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181


>UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales
           RepID=UPI0001B554B1
          Length = 210

 Score =  174 bits (442), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 4/181 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+RLS +R + GL+    A  +G++   +S IE+   +P+ +TL KL     + +  FF
Sbjct: 31  LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90

Query: 68  SEPEKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124
              E   EP  V+       + +  +G+  +L+      R L M+     PG +      
Sbjct: 91  DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPH 149

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H+GEE+  +LEG + +T+ G++  L AG +   +  +PH F N       I+ A TP +
Sbjct: 150 RHEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPS 209

Query: 185 F 185
           F
Sbjct: 210 F 210


>UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ
          Length = 201

 Score =  173 bits (440), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R   GL+  + A+ S  + S IS IE  + SP+++ L ++      +++   
Sbjct: 26  LGVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALT 85

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           +E    + P  +  +  +I+ G   +S++ +        L        PG  +   I+H 
Sbjct: 86  TEEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHV 143

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE+G VLEG + L +  + + + AG ++  ++  PH + N      RI   +TP TF
Sbjct: 144 GEEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201


>UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia
           RepID=A9ALB0_BURM1
          Length = 193

 Score =  173 bits (439), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 5/181 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G ++  +RQ+   +    A  +G++   +S +E+   SP++++L  + +  G+++  F
Sbjct: 16  ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVS--MKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
               + P E + V   + L   G    +     + N +  R L  I     PG    E  
Sbjct: 76  V---DTPSEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVT 132

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
            H GEE   V+EGE+ LT+ G+ + L AG S    + +PHS++NT+     ++   TP  
Sbjct: 133 THAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRL 192

Query: 185 F 185
           F
Sbjct: 193 F 193


>UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA
          Length = 185

 Score =  173 bits (438), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 3/185 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D+ +  G  +  IR ++GL  +  AE   ++ S +S IE+   +P+++T++ + +   + 
Sbjct: 2   DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGTTT 120
           L +FF EPEK D    ++ ++D   + ++ +  +L+    P   +  +  T+  +   T+
Sbjct: 62  LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPT-NIECMKMTFTEKNAETS 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H+GEE+  +L G++ +TI  Q   +  G S  I    PH ++N +AG   ++ + 
Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180

Query: 181 TPTTF 185
           TP  F
Sbjct: 181 TPPEF 185


>UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD
          Length = 197

 Score =  173 bits (438), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 6/183 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + +  G ++ + R+ +GL+    ++ SGL+   +S IE+   SP++ ++ ++    G+ L
Sbjct: 12  QKMGLGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPL 71

Query: 64  SEFFSEP--EKPDEPQVVINQ--DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           S  F     E P E  +V+ +     +++G+ GV+ +L+        + +   + +PG  
Sbjct: 72  SWLFDNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGE-MQIYLVSIRPGGQ 130

Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +G E   H+GEE G VL G + LT++ +   L  G S+   + + H F+N       ++ 
Sbjct: 131 SGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVW 190

Query: 179 AHT 181
           A++
Sbjct: 191 ANS 193


>UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL
          Length = 189

 Score =  172 bits (436), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             GK++ ++R  + L+ +  +E + L+   +S +E+   + AI +L K+ K   +SL+ F
Sbjct: 4   DIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RI 124
           F  P+K  +  +   + +++++ +       + N   +++         P  +       
Sbjct: 64  FQAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENIISY 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H+GEE   VLEG + L IN  +  L  G S   ++ I H+++N ++   R+++ HTP  
Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183

Query: 185 F 185
           F
Sbjct: 184 F 184


>UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae
           DSM 12333 RepID=C5BVJ0_BEUC1
          Length = 201

 Score =  171 bits (435), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL ++R+Q GL+ R  A  +GL+ + +S IE  +  P+I++L+KL + +   ++  F
Sbjct: 25  LGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLF 84

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-H 126
            EP+ P        +  L+   +  ++ + V  G  +  L ++     PG  + E  + H
Sbjct: 85  HEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGD--LEVLRSVLAPGDVSAEGPRGH 142

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
              E   VL GE+V+TI   D+ LVAG++   ++  PH + N SA    I+   TP T
Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200


>UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2QWJ8_9PLAN
          Length = 183

 Score =  171 bits (434), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 1/176 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L   +R+ E+R   GL+    AE +G+T   IS IE  +V+P++ TL K+ + +G+S ++
Sbjct: 4   LQLSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTAD 63

Query: 66  FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
             +  ++  +  VV  ++   I      +    + +    + +  +    QPG    E++
Sbjct: 64  LLAGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKL 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H+GEE   V++G I      + Y L  G     +  + H+  N    I R+I  +
Sbjct: 124 AHEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVY 179


>UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus
           RepID=Q0S834_RHOSR
          Length = 187

 Score =  171 bits (433), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +A G  +   R   GL+ R  A  +GL+   +S  E     P++  L ++ +V G +  
Sbjct: 9   AVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTAH 68

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
               +  +     V   +     +    V   L       R +     T QPG+  GE  
Sbjct: 69  ALLEQGARTPTSLVRSREGRRFALSDGAV---LRFCSTGVRAMEPNEVTAQPGSQAGEHT 125

Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           +H GEE   V++G + + +   + Y L  G +      +PH + N +A   R +   TP 
Sbjct: 126 EHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLITSTPP 185

Query: 184 TF 185
           +F
Sbjct: 186 SF 187


>UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales
           RepID=B0UFY6_METS4
          Length = 201

 Score =  170 bits (432), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +++ L  G+++  +R+ +GL+ ++ A   G++   +S IE+++    I  L+++  + G+
Sbjct: 16  NEQELLLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGV 75

Query: 62  SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
            LS FF      P +  +  V   +   +     G++ +L+     N  L ++  T  PG
Sbjct: 76  QLSWFFQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNL-NGPLEVLLSTIAPG 134

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           + + +   H G E G VL G + L I  + + L  G S++ ++   H  +N      +++
Sbjct: 135 SDS-DFYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVV 193

Query: 178 SAHTPTTF 185
              TP  +
Sbjct: 194 WIITPPHY 201


>UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45
           RepID=D0D911_9RHOB
          Length = 205

 Score =  170 bits (430), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 7/187 (3%)

Query: 1   MSDEGLA---PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M D G      G RL  +R+  GLS +  +  + L+  ++S IE+D  SP++ TL KL  
Sbjct: 15  MKDHGRNDSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLAT 74

Query: 58  VYGLSLSEFFSEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
            + + LS FF++P   +   +VI +D    +++ +QG+   L+     +  L ++     
Sbjct: 75  SFDVPLSYFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALD-GLQLMMVRMT 133

Query: 116 PGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           P +++G E   H+G + G VL G + L + G+ Y L  G S+   +  PH F        
Sbjct: 134 PESSSGPEAYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPA 193

Query: 175 RIISAHT 181
            ++  +T
Sbjct: 194 EVLWINT 200


>UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771
           RepID=UPI00019046BF
          Length = 280

 Score =  169 bits (429), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +  A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L
Sbjct: 97  QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 156

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118
             FF   ++     VV  +  L      G        + +     +R +   +  +   +
Sbjct: 157 DHFFKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDS 216

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E  +H   E   VL G +V+ ++G++  L AG +   ++ +PHS+      I   + 
Sbjct: 217 PPSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISSALV 276

Query: 179 AHTP 182
             +P
Sbjct: 277 VISP 280


>UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna
           RepID=C2HHC8_PEPMA
          Length = 179

 Score =  169 bits (428), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 3/181 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +R + GL+Q   AE S LT   IS +E+D  SP++ +L  LL   G  ++ 
Sbjct: 1   MEIGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMAT 60

Query: 66  FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           FF +  KP   ++    D    E  S   ++  +   +   T+  +  T      T E  
Sbjct: 61  FFMD--KPSVKEIFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYN 118

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
             +GEE G VLEG   + ++ + Y L  G  +           N    IC++I   +P  
Sbjct: 119 PFEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPPN 178

Query: 185 F 185
           F
Sbjct: 179 F 179


>UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus
           RepID=B8G9C1_CHLAD
          Length = 211

 Score =  168 bits (427), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 2/178 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKRL  +R++Q +S R  AE SGL  + +S IE  + SP++STLQ+L     + +S 
Sbjct: 20  VDVGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISA 79

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124
           FF+ PE P +  V       I       ++  +  G  NRTL  +  T  PG  +G E I
Sbjct: 80  FFT-PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAI 138

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            H G+E    + G+I+ T+  Q Y +  G S      +PH + N  +   + +    P
Sbjct: 139 IHTGQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCP 196


>UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria
           RepID=A1BAD5_PARDP
          Length = 213

 Score =  168 bits (427), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 13/194 (6%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSD     G RL E+R    +SQR+ AE SG+ H  +S IE  + SP++++L+K+L   G
Sbjct: 22  MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVS--------MKLVHNGNPN-RTLAMIF 111
           +++SEFF EP+ P  PQ      +L ++ S+  S        M L   G+     L ++ 
Sbjct: 80  VTMSEFF-EPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILH 138

Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
           E Y+PG  TGE +  H G E G V+ GEI LT+  Q   L AG SY   +  PH F N S
Sbjct: 139 ERYEPGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVS 198

Query: 171 AGICRIISAHTPTT 184
                ++SA TP  
Sbjct: 199 DREAVVVSACTPPY 212


>UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae
           RepID=A6UA69_SINMW
          Length = 182

 Score =  168 bits (427), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%)

Query: 24  RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83
           R  A  SG++HS IS IE+D++SP+I TL  +L   G +L  FFS+ +         +  
Sbjct: 20  RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79

Query: 84  DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142
           DLIE+G    +S +++   +PNR + M+ E Y  G  TGE   H  +E G VL G + +T
Sbjct: 80  DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139

Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +  Q   L  G  Y  ++ +PH F N   G   ++SA TP T+
Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182


>UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium
           sp. ORS278 RepID=A4YW73_BRASO
          Length = 184

 Score =  168 bits (426), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 8/183 (4%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G RL   R  +G+  R  A++ G   S IS IE  KV P++  L K++      ++ 
Sbjct: 1   MNIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMAS 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEM------GSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           FF    + D+ + V   +D +++      G +GV  + +        L        PG  
Sbjct: 61  FFGL--RVDDYKQVQKPEDRMKVYVDALRGGKGVVYERLVPVAAGNLLEANIHVVAPGGE 118

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             + I HQGE +G ++ G I LTI+   Y + AG S+     + +S+ N      RI+  
Sbjct: 119 KIDLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWV 178

Query: 180 HTP 182
           +TP
Sbjct: 179 NTP 181


>UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN
          Length = 189

 Score =  167 bits (424), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 81/175 (46%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +  +R  +  + ++ AE + L+ S +S +E+ K S  + +L+K+ +  G+S   F
Sbjct: 4   TIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           FS        QV     +   +       + + +   N TL  I  T  P    G    H
Sbjct: 64  FSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVH 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           QG+E   VLEG + + +  +++ L  G S  +++ +PH++ N +  + R +  ++
Sbjct: 124 QGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178


>UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JI22_AGRRK
          Length = 204

 Score =  167 bits (424), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 5/182 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           ++  +  G+R+  +R ++ LS    A  +G++  A+S IE+   S  +  +  L     +
Sbjct: 16  NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75

Query: 62  SLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
             S    +  +P  D   V  N    + + ++G+S  L+    P   L  +    +PG  
Sbjct: 76  EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGG 133

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           T E   H G E G V  GE+ L ++   Y L  G S+A  + +PHSF N     C I+  
Sbjct: 134 T-ETYAHTGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWV 192

Query: 180 HT 181
           +T
Sbjct: 193 NT 194


>UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter
           sphaeroides RepID=B9KL60_RHOSK
          Length = 211

 Score =  166 bits (422), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 7/186 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+   L  G+RL +IR+   LS    +E SG++   +S +E+    P++ T++++ +  G
Sbjct: 1   MNSNHL-IGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALG 59

Query: 61  LSLSEFFSEPEKP----DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           +        P++     D+  V   Q   + +   G++  LV   + +  + ++    +P
Sbjct: 60  VPPFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFD-AMQLMTVVMEP 118

Query: 117 GTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           G+ +G    +H+G ++G +L G + L ++G+ + L AG  +A ++ +PH F N       
Sbjct: 119 GSKSGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAE 178

Query: 176 IISAHT 181
           ++  +T
Sbjct: 179 VLWINT 184


>UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PEN9_9FIRM
          Length = 188

 Score =  166 bits (422), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  +   R++Q +S +  A    ++ S +S IE +K  P+++TL+++    G+++S+  
Sbjct: 4   LGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKLL 63

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKH 126
            E E      +       +     G+ ++ +   +P + +        P   +G+    H
Sbjct: 64  GEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPYTH 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYA-INTGIPHSFSNTSAGI-CRIISAHTPTT 184
            G+EI  VLEG I L ++ +   +  G SY  I+    H F N S     R++    P  
Sbjct: 124 AGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNPPY 183

Query: 185 F 185
           F
Sbjct: 184 F 184


>UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AS09_RUBXD
          Length = 292

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
           PG+RL  +R +   + +  +E +GL+ S IS +E+     ++++L++L + YG+++ E F
Sbjct: 118 PGERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELF 177

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
               + + P V  ++  ++E    GV  + +  G   + +   +     G  +     H 
Sbjct: 178 GTDLEQNSPLVRAHERPVMEWD-NGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHD 234

Query: 128 GEEIGTVLEGEIVLTINGQ-DYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE   V+ G + + +  Q  Y +  G +   ++  PH +          +  +TP TF
Sbjct: 235 GEEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWW-AGDEPVEAVYVNTPPTF 292


>UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ
          Length = 203

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G+R+ E+R + GL+ +  A+ SG++   +S +E+DK +P++ TL  +    G+ +  F
Sbjct: 21  AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
            S P KP +      +     +    +  + +    P  TL+ +      G  + E   H
Sbjct: 81  ISTP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYAS-EITAH 138

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            GEE+  VL+G +  T+    + L  G S       PHSF+N      R++   T  
Sbjct: 139 VGEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSP 195


>UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter
           RepID=B8HGK7_ARTCA
          Length = 201

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G ++  +R+ +G++  R +E++GL+ + +S IE+   +P+ +TL +L     + +  F
Sbjct: 19  TVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDIPVGRF 78

Query: 67  FSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGE 122
           F   ++   P V  +    ++     S G ++  +   + + T+   + +  PG  T+  
Sbjct: 79  FIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGHDTSAT 138

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H GEE   ++ G   + ++G  Y L  G S   ++ IPH + N+   +C  I  + P
Sbjct: 139 PFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAIWVNAP 198


>UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7
           Tax=Rhodobacteraceae RepID=Q28QP9_JANSC
          Length = 205

 Score =  166 bits (420), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+   A G  + + R+Q  L+ +   + +GL+   +S +E+ + +P++ TL ++ +   +
Sbjct: 6   SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L  F + P KP +            +    +  + V    P   L+       PG  + 
Sbjct: 66  ELEYFIATP-KPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYAS- 123

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E + H+GEEI  +L GEI  T+ GQ + L  G S   +   PHS+SN +    RI+   T
Sbjct: 124 EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWTGT 183


>UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes
           RepID=C6Q1A6_9CLOT
          Length = 184

 Score =  165 bits (419), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  L  GK L+ IR+Q+GLS  + AEL+G++   ++ IE+   +P ++TL K+     
Sbjct: 1   MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S F  E  +        N   ++E   + +   L    N  R   +     +PG   
Sbjct: 61  VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNT-RRFEVFTIELEPGCNH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                ++G EE   V +GE+   I    Y L  G +       PH + NT+  I  +I  
Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEI--VIFQ 177

Query: 180 HTPTTF 185
           H    F
Sbjct: 178 HIIYYF 183


>UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD
          Length = 205

 Score =  165 bits (418), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M       G+RL   R+Q+GLS    AE +GL+   +S +E+D VSP+I +L  +    G
Sbjct: 1   MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTT 119
           L++++ F+       P VV    D    G  G  ++      P+     + ET   PG +
Sbjct: 61  LAVADVFAV-----APVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGS 115

Query: 120 TGERIKHQGE--EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            G+ + H     E+  V+ G I L    + Y L AG S        H++ N   G  R++
Sbjct: 116 GGDELYHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVL 175

Query: 178 SAHTPT 183
               P 
Sbjct: 176 WVLAPA 181


>UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales
           RepID=B5EB42_GEOBB
          Length = 188

 Score =  165 bits (418), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 8/188 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS E    G R+ ++R  + L+ +  A  +G + + IS IE D VSP I+TL K+ K + 
Sbjct: 1   MSSE-YNIGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFD 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFET 113
           + L++FFSE E     +VV      I       E   QG   + +     N+ +     T
Sbjct: 60  VKLAQFFSEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVT 119

Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
                       H GEE   V+ G     +  Q   L  G S    + + H   +     
Sbjct: 120 LTEKAPEANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKE 179

Query: 174 CRIISAHT 181
            R++   T
Sbjct: 180 VRVLVVVT 187


>UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K4_PELCD
          Length = 188

 Score =  165 bits (417), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK+L   R  +GL+ +    LSG++ + IS IE+    P++  L KL    G+S+  F 
Sbjct: 6   IGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFV 65

Query: 68  SEPEKPDEPQVVIN-QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125
            E EK     +    Q + +        +  +  G  + +  ++ +T +    +G+  + 
Sbjct: 66  EEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGDAPMV 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           H GEE   VL+G +   I  + Y L +G S +    +PH + N   G   ++   +P 
Sbjct: 126 HTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVVSPA 183


>UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1
           Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB
          Length = 204

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D   A G+   ++RQ QG+S R  +E SG++   IS IE+D  +P++  L  + +   +
Sbjct: 10  EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69

Query: 62  SLSEFFSEP-------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114
            +   F +        +   +P  +        +    +  +L+ +G  N  L ++  T 
Sbjct: 70  PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSG-GNHNLQIMILTI 128

Query: 115 QPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
           +PG T+G   + +  E+ G VLEGE++L+++ ++ HL  G S+  ++  PH+F N     
Sbjct: 129 EPGGTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRP 188

Query: 174 CRIISAHTPTTF 185
            RI+       F
Sbjct: 189 ARILWVIGAVQF 200


>UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2
           Tax=Bacteria RepID=C1ZLV1_PLALI
          Length = 189

 Score =  163 bits (414), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 3/177 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +   +R+   R  Q L+  + A  +GLT S  S +E  +++P++ +L ++    G+S+S+
Sbjct: 4   VELAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSD 63

Query: 66  FFSEPEKPDEPQVVINQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
                ++  +  V+   +  +      +  +  + + +  P+R +     T   G    +
Sbjct: 64  LVEGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRKD 123

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
            + H+GEE   VL G++ L  N +   L  G S   +   PH   N      R++  
Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCV 180


>UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZGC0_BREBN
          Length = 185

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G ++  IR+++G +    A  +GL+   +S +E+    P++ +L K+ K     +  F
Sbjct: 7   TIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALESPIIHF 66

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125
           F + ++       + +   +       +  L+  G   + L M+     PG    ++  +
Sbjct: 67  FEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK-LGMLEVRLMPGEMAVDKFVQ 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            +GEE  TV+ G +    N +++ L AG S + ++   HS  NT      +I +  P  F
Sbjct: 126 SEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSVNPPQF 185


>UniRef50_A5V718 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Sphingomonas wittichii RW1 RepID=A5V718_SPHWW
          Length = 201

 Score =  163 bits (412), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 3/184 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D  ++ G+ + + R++  L+    A  S L+ S IS  E+ K +P+I +L +L +   +
Sbjct: 11  TDPMMSFGELIRDRRKRLKLTLNEVALRSDLSVSFISLAERGKATPSIVSLLRLAQALDV 70

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            +S F + P+  +   +    D         V+   +  G+ N+ +        PG    
Sbjct: 71  DISYFLAPPQTNN--ILHRAADPEYYPIDSPVTYIRLSAGHVNQKMDSFIYIIPPGPIF- 127

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            R+   GE    +LEGE+   +    + L  G S   +T   ++  N      +++   T
Sbjct: 128 PRVHRDGESFYYMLEGELHFEVGDDSFDLGPGDSLHFDTRHSYAMRNCGEKPVKVLWVGT 187

Query: 182 PTTF 185
           P  F
Sbjct: 188 PVLF 191


>UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3
           Tax=Burkholderia RepID=Q13H28_BURXL
          Length = 204

 Score =  163 bits (412), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL  +R  QGLS    A  +G++   +S +E++K +P++  L++L +   + L+  
Sbjct: 18  DVGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTAL 77

Query: 67  FSEPEKPDEP-----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             E +   +P          +  L E+G  G+  +L+   + +  L M+      G+ + 
Sbjct: 78  LEEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSP-HGDHDLQMMIIMLPAGSGSE 136

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E +   GE+ G VLEG +VL +  +   L AG S+   + +PHS  N S    R++    
Sbjct: 137 EVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMN 196

Query: 182 --PTT 184
             P  
Sbjct: 197 TQPPV 201


>UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC
           9817 RepID=C3WFC8_FUSMR
          Length = 187

 Score =  161 bits (409), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 2/182 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  GK++   R  + L+ +  +E  G+T S +S IE+D V+P+I+TL+ + K   + L 
Sbjct: 7   DLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKALDVPLF 66

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123
            FF E E  +E  V  N    I +         +   +   ++          + T E  
Sbjct: 67  MFFKE-ENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYSFTEEIG 125

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H GEE+  +L+G++ + I  ++Y L  G S  I     H + N      ++I A  P 
Sbjct: 126 QSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVIFAINPP 185

Query: 184 TF 185
           +F
Sbjct: 186 SF 187


>UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium
           RepID=A6LSV7_CLOB8
          Length = 184

 Score =  161 bits (408), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 2/175 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +     G +L EIR ++ LS   AA+L+G++ + +  IE+ + +P +STL K+     
Sbjct: 1   MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S F  E +   E     N D +IE  ++ + +  +   + NR   +     + G   
Sbjct: 61  VSFSFFIDEEQDELEIVDQNNIDPIIEDDAR-MKLYPIFPFDANRGFEIFTIELESGCNH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                  G EE   V +GE+ + I+ Q Y L  G S      IPH + N S    
Sbjct: 120 VSTPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKA 174


>UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2
          Length = 184

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 1/182 (0%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G+++   R+  GL+ +R AEL+ +T S +S IE+   +P++ TL+ +     + L 
Sbjct: 3   NINVGQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALNIPLF 62

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
            FF E    +E  V  NQ   I     G VS +L+           +        ++ E 
Sbjct: 63  NFFLEDTSTEELVVRANQRKKITFPESGNVSYELLSPNLDGSLELALMNLLPQTASSMEP 122

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           + H+GEEI  ++EG++ L +N +   L  G S  I     H + NTS     +I   TP 
Sbjct: 123 VAHKGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFGVTPP 182

Query: 184 TF 185
           +F
Sbjct: 183 SF 184


>UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT
          Length = 201

 Score =  160 bits (405), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 3/176 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R+ +G +    A  +GL+ S +S +E+ + +  +  L ++    G +++  
Sbjct: 21  AIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIARL 80

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
             E E P    V+ +   +I  G  G + ++V    P     M+  T  PG   GE   H
Sbjct: 81  V-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139

Query: 127 --QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                E   VLEGE+ LT++G ++ L AG +   +    H + N  A  CR + A 
Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAM 195


>UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria
           RepID=B5EKJ2_ACIF5
          Length = 181

 Score =  160 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 3/174 (1%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           K++ ++R+ +G S R  A  + ++ SA+S IE  + SP+I+TL+K+     + ++  F +
Sbjct: 6   KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65

Query: 70  PEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KH 126
            E    P ++ + D           S++ +  G P + +  +    +PG   GE      
Sbjct: 66  GETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTSA 125

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           +GEE   V+ G      +G    L  G +   +  +PH++ N       ++   
Sbjct: 126 EGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179


>UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales
           RepID=Q39Q24_GEOMG
          Length = 198

 Score =  160 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 7/182 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G+++ ++RQ+Q L+ +  +ELSGL+   +S IE D+V+P I+TL K+ K   + + 
Sbjct: 12  ELRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIH 71

Query: 65  EFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
            FF E E   +       Q    +         G   + +  G  ++ +      ++   
Sbjct: 72  YFFEEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTE 131

Query: 119 -TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                  +H G E   +LEGE+          L  G S   ++  PH + +        +
Sbjct: 132 WDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAV 191

Query: 178 SA 179
           + 
Sbjct: 192 AV 193


>UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D6V3_PAESJ
          Length = 182

 Score =  160 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 5/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G  +  IR+++ ++  +  E +GL+   +S +E +K SP+I+TL+ +     + L+ 
Sbjct: 1   MDIGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAY 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
              +  K ++ Q+V      I   + G     V + +  + + M+     PG +TGE   
Sbjct: 61  LLLD--KKEKMQIVRKDGRRI--TTSGPDKLKVSHLSSTKNVHMMIVELPPGASTGENHA 116

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHT 181
           H+GEE+  V++G I +        L AG S++ N   PH+  N       + IS +T
Sbjct: 117 HEGEEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVYT 173


>UniRef50_A3JX32 Transcriptional Regulator, XRE family with Cupin sensor domain n=1
           Tax=Sagittula stellata E-37 RepID=A3JX32_9RHOB
          Length = 174

 Score =  160 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 9/174 (5%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           +SQR  A  +GLT SAIS IEQ+K SP++++L++LL    ++LSEFFS  E+   P+   
Sbjct: 1   MSQRDLAGRAGLTSSAISLIEQNKSSPSVASLKRLLDAIPMNLSEFFSVVEQRKTPKYFY 60

Query: 81  NQDDLIEMGSQGV-------SMKLVHNGNPNR-TLAMIFETYQPGTTTG-ERIKHQGEEI 131
             D+ IE+  Q +        + L   G+ +R +L ++ ETY  G+ TG E ++H+GEE 
Sbjct: 61  APDEYIELSPQDIGLGVGAARVSLRQLGDASRHSLQVLHETYPAGSDTGPELLRHEGEEA 120

Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           G V+ G I +T+  Q   L  G  Y  ++ +PH F N S   C +ISA TP TF
Sbjct: 121 GIVVSGLIEVTVADQIRVLNPGDGYLFSSQLPHRFRNISDAPCVVISACTPPTF 174


>UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas
           aeruginosa group RepID=A4XQJ4_PSEMY
          Length = 188

 Score =  160 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+RL   R+  G +  + A  +GLT S +S  E++    ++S+L  + K   + L+  
Sbjct: 5   RIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVL 64

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F +P +P +P   +N+     +G Q ++ + + +  P  ++  +      G  + E I H
Sbjct: 65  FDQPAQP-QPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVGYQS-ELIAH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +G E   VL G IV TI G+DY L  G S   + G  H  +N++     +++  T   F
Sbjct: 123 EGVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181


>UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci
           RepID=C1XM81_MEIRU
          Length = 186

 Score =  159 bits (403), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 4/177 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R  +GL+  + A+ SGL  S IS +E++  + ++++L K+     +     F
Sbjct: 12  IGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQPGSLF 71

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
              + P    V   +      G  GV   ++  G     + +  E    G    E     
Sbjct: 72  ---DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKEPYSFP 128

Query: 128 GE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            + ++ TVLEG +  TI    Y L  G S   +   PH++ N       ++   +P 
Sbjct: 129 SDTDVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVLSPA 185


>UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae
           RepID=B9JGR0_AGRRK
          Length = 272

 Score =  159 bits (403), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 3/179 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G++L  +R   G +  + A   G+T S +ST+E+     +  TL  L   YG ++S   
Sbjct: 96  IGRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLS 155

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
            E  +     +   +       + GV+++L+  G     +        PG T+    +H 
Sbjct: 156 GEEREDVPVLIRSGEWRAWPETTPGVTVQLLAEGRT--MMDCHRFVLAPGATSEGAYRHD 213

Query: 128 GEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE   +L G + L ++  Q + L+ G S    +   HS+ N   G   ++  +TP TF
Sbjct: 214 GEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPTF 272


>UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO
          Length = 190

 Score =  159 bits (403), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 5/188 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + DE    G  L  +R+ +GL+    AE  G +   +S +E+DK  P+IS L+ + KV  
Sbjct: 5   LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64

Query: 61  LSLSEFF-SEPEKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPG 117
           +S+S  F   P    E   ++       MGS  +G+  +L+     +    M+  T++PG
Sbjct: 65  VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELLSPDLTD-DFEMVHSTFEPG 123

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +   E +    +E+  +L G + + IN   + +  G S+ I       +SN  A     I
Sbjct: 124 SRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIRGE-AFRWSNPYAEPAVAI 182

Query: 178 SAHTPTTF 185
               P  +
Sbjct: 183 WVIAPPVY 190


>UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae
           RepID=A6UHX0_SINMW
          Length = 193

 Score =  159 bits (403), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 5/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +  A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L
Sbjct: 11  QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 70

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118
             FF+  ++     +V  +  L      G        + +     +R +   +  +   +
Sbjct: 71  DHFFNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDS 130

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E  +H   E   VL G +++ +NG++  L  G +   ++ +PHS+ +    I   I 
Sbjct: 131 PPSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAIV 190

Query: 179 AHT 181
             +
Sbjct: 191 VTS 193


>UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Q4A0R4_STAS1
          Length = 181

 Score =  159 bits (402), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      K +++ R++  LS  + A  +G++ + +S IE+ + +P I+TL K+     
Sbjct: 1   MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +SLS+  S     ++    I++ D+I +  + VS+      + N+   M     QPG   
Sbjct: 61  ISLSQLTS---TSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKM 117

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                H G EE   V +G + + ++G+ Y +   Q++  N+ +PHS+ N    I  +
Sbjct: 118 HSDPHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVAL 174


>UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905
           RepID=A3I6C0_9BACI
          Length = 182

 Score =  159 bits (402), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G ++ ++R++  +SQ   A    LT S IS IE  K +P++ TL K+ +++ + ++ 
Sbjct: 4   LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMAW 63

Query: 66  FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           F  + +      V   +  + +E    G   +L+ N +    +     T   G       
Sbjct: 64  FVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLALY 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H+ +E   ++ G I+L  + + YHL  G S   +    H F N S+   ++++ +
Sbjct: 124 THENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIY 179


>UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SGH2_9BACT
          Length = 196

 Score =  158 bits (401), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 5/184 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  +  G+R+ +IR ++GL+ +  A  +G + + IS IE + V P I+TL K+ KV  
Sbjct: 1   MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDD----LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           + ++ FF E E   +   V+ +D       E    G   + +        L ++  T +P
Sbjct: 61  VKMTYFF-EEEINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKP 119

Query: 117 GTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                +   H+G E   V+EG + + +      L AG S A N+ IPH+          +
Sbjct: 120 DKRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALV 179

Query: 177 ISAH 180
           + AH
Sbjct: 180 LCAH 183


>UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Rhodobacteraceae RepID=A6DW64_9RHOB
          Length = 209

 Score =  158 bits (401), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            LA G+R+ + RQ   ++ +  +   G++ S +S IE+D   P + TL ++     +S+ 
Sbjct: 11  PLALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSID 70

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
            F + P + D             +    +  + +    P   L        PG  + E +
Sbjct: 71  HFIATPRQAD-SVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYES-ETV 128

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA----- 179
           +H GEE+  VL+GE++  +NGQ + L  G S       PHS+SN S    R++       
Sbjct: 129 QHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLLWTGKMLH 188

Query: 180 -HTPTTF 185
             TP+++
Sbjct: 189 GATPSSY 195


>UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB
          Length = 229

 Score =  158 bits (401), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 3/182 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + L  G RL   R+ Q ++    ++ + ++ S +S IE DK  P++ +L  +    G+ +
Sbjct: 24  DQLRIGPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDI 83

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121
           + F +  E PDE  +       + + +  V +++  +   + +  L        P  + G
Sbjct: 84  TTFLTL-EIPDEFLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGG 142

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             + H+GEE+  V++GE+ +T+N   +    G S    +   H++ N S     +I  +T
Sbjct: 143 PSMSHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINT 202

Query: 182 PT 183
           P 
Sbjct: 203 PP 204


>UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5
           Tax=Actinobacteria (class) RepID=A0JT75_ARTS2
          Length = 191

 Score =  158 bits (401), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+  +A G R+   RQ Q L+  + A+ +GLT   +S +E+D  SP++++L  L +V  +
Sbjct: 9   SNIPVAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSI 68

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S+ + F+ PE     +   ++   I +G +G+  +L+   +  R   +       G    
Sbjct: 69  SIGDLFAAPETHLTKK---DEGPRISLGGEGIIERLLTARSERRVQIIQAVIEPRGRGES 125

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           E      + ++  V+ G I L +  ++Y L  G +       PH++ N +     ++   
Sbjct: 126 ELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLWVL 185

Query: 181 TPT 183
            P 
Sbjct: 186 VPA 188


>UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium
           RepID=Q8RFX4_FUSNN
          Length = 199

 Score =  158 bits (401), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 3/185 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           ++ +  G  +  IR+ + L  +  A   G++ S +S IE+   +P+++T++ + +V  + 
Sbjct: 16  NKEINVGITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLEVP 75

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGTTT 120
           L +FF + EK      ++ +DD   + ++ V+ +L+   +    +  +  T   +   T+
Sbjct: 76  LFKFFMDLEKEKYEFHLLKKDDRKIISTEYVTYELLSP-DVETNIECMQMTLIGKNAETS 134

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            + + H+GEEI  +L G++ LTI      L +G S  I + +PH ++N       +I + 
Sbjct: 135 VKPMAHKGEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIFSV 194

Query: 181 TPTTF 185
           +P  F
Sbjct: 195 SPPEF 199


>UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q8Q5_9ENTR
          Length = 199

 Score =  158 bits (401), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +      G RL  +R+ +G+     AE  G++ S IS +E++    +I+TL K+ +V G+
Sbjct: 15  NTPDFNVGIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGI 74

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           + ++ F   + P    V   Q   I +G + +   L+  G  +  + +  E    G +  
Sbjct: 75  TPAKLF---DPPSTSFVPAGQGTPISLGGEKMREYLISGGVNDDMMVLYSEIDPLGGSGA 131

Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISA 179
           E    +   ++  VL GE+ + +  Q Y L  G +      +PH++ N S   +C  I  
Sbjct: 132 EPYTLNAAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWV 191

Query: 180 HTPT 183
             P 
Sbjct: 192 IVPP 195


>UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile
           RepID=C9XR14_CLODC
          Length = 181

 Score =  158 bits (400), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 5/182 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D  L  G++++E+R++Q LS R  A+L+ +T S +S IE+   +P++++L+ +     
Sbjct: 1   MND--LNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58

Query: 61  LSLSEFF-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           + L  FF SE +K +      N+  +I  GS+ V  +++   +    L        P T+
Sbjct: 59  VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSG-NLEFAIMDLAPNTS 117

Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +  +RI H G+EI  VLEGE+ L ++  ++ L  G S  +  G  H + N S    ++I 
Sbjct: 118 SCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIF 177

Query: 179 AH 180
           A 
Sbjct: 178 AV 179


>UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription
           regulator protein n=1 Tax=Spiroplasma citri
           RepID=Q14Q08_SPICI
          Length = 177

 Score =  158 bits (399), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 3/180 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +RQ+  L+    A    LT   IS +E+D  SP+I TL+ +L+V G +L++
Sbjct: 1   MLLGEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLAD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF    +    + V   ++  ++      ++ +        L  I    +P   +   + 
Sbjct: 61  FFK---QEKNRKFVYAAEEHYKVEQNNYRIEWLVPNAQVNELEPILIQIKPQGESERILP 117

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            +G+  G VL+G +++    +        S+ +     H   N +  I  ++   TP  F
Sbjct: 118 FEGQIFGYVLKGTVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177


>UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TJX2_9PROT
          Length = 192

 Score =  157 bits (398), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL ++R+++G++    A  +GLT   +S IE  K+ P I+TL ++ +  G  ++ FF
Sbjct: 5   IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIGCDMAYFF 64

Query: 68  SEPEKP---DEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
              +     D+   V+  D+         S G   + + +   ++ +     T+      
Sbjct: 65  QSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFTFPAELQG 124

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
               +HQGEE+  VL G +V  I G++  L AG S   ++ +PH   +  A    ++  H
Sbjct: 125 DTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQAQALVIIH 184


>UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5
           RepID=B6JAK2_OLICO
          Length = 202

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 3/177 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G+R+   RQQ+G+S  + A  +GLT S +S +E+    P+I+T  K+ +V+G ++ + 
Sbjct: 22  SLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQL 81

Query: 67  FSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             E        +V   +    L      G +++ + +  P++ +            +  R
Sbjct: 82  LGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             H GEE+  VL G+I +    +   L AG +   N+  PH   +        +   
Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVVV 198


>UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia
           ubonensis Bu RepID=UPI00016A6284
          Length = 177

 Score =  156 bits (395), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 1/175 (0%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+  +R+Q  L+    A  +G++   +S IE+ +  P+I++L  + +  G+++  F 
Sbjct: 1   MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
             P                   +   ++  V +      L  +      G    E   H 
Sbjct: 61  GAPGDAPT-ACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHT 119

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           GEE   V+ GEI LT++ +   L AG++    + + H++SN +     I+    P
Sbjct: 120 GEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWVGAP 174


>UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus
           HTCC2516 RepID=Q2CEW8_9RHOB
          Length = 202

 Score =  156 bits (395), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  L   R+ QG++ R  AE +GL+   IS  E+D   P++S+L+K+ +V G+SL +  
Sbjct: 16  IGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGVSLQDIL 75

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             PE     +     +  +     G    ++ + +    P  TL+ +     PG  + E 
Sbjct: 76  --PETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHRS-EL 132

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H GEEI  VLEG + + ++G+   L  G S   ++  PH+  N +  I  I+   T  
Sbjct: 133 QSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILHVCTID 192

Query: 184 TF 185
            F
Sbjct: 193 VF 194


>UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD
          Length = 189

 Score =  156 bits (394), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 1   MSDEGLA--PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M+ E L+   G+RL  IR  +G++  + A+ +G++   +  IE+ + +P +STL K+   
Sbjct: 1   MNKEMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATG 60

Query: 59  YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPG 117
             +S + F    E       VI +D ++ +       +  +   + ++   +     + G
Sbjct: 61  LHVSFTAFI---EDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAG 117

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           T        QG  E   V +G + + I  + Y L  G          H + N S+     
Sbjct: 118 TDHTSEGHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEA-- 175

Query: 177 ISAHT 181
               T
Sbjct: 176 -CVFT 179


>UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K5_PELCD
          Length = 188

 Score =  156 bits (394), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 3/180 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK+L  IR +  L+ +  +E + ++ + IS IE+   +P++  L +L  V+  S++ F 
Sbjct: 7   IGKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFV 66

Query: 68  SEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124
            E E   E       +    +   +Q +  +    G  +      +   +P  T+G+  +
Sbjct: 67  EEVENTHEIVHSRPGERSCTVFDDNQNLRTESFTAGLRDPQFTSFYCVIKPHGTSGDADM 126

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
            H G+E+  VL+G + +T+ G+ + +  G+S +  + +PH ++N S     ++   +P T
Sbjct: 127 FHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWVLSPFT 186


>UniRef50_A3Y8G1 Transcriptional regulator, putative n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y8G1_9GAMM
          Length = 184

 Score =  156 bits (394), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+RL  IR+ +GLSQR  A+ +G+T+SAIS IE ++VSP++S+L+K+L   G+SL+E
Sbjct: 1   MDIGERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSLTE 60

Query: 66  FFSEPEKPD-EPQVVINQDDLIEMGSQGVSMKLVH-NGNPNRTLAMIFETYQPGTTTGER 123
           FFS  +K   + QVV   D+L+++    V+ KLV  +    R++ +  +TY   +    +
Sbjct: 61  FFSIKQKDKLDYQVVYRSDELLDVSLDEVTTKLVGKHFLKERSMGLTLQTYPVASRAEVK 120

Query: 124 IKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              Q  E+ G V++GE+ L I G+ + LVAG S+   +   H F N   G   ++S  T
Sbjct: 121 ATSQISEKAGYVIKGEMTLEIQGEVHPLVAGDSFYFESHFAHRFINQGRGEALLLSVQT 179


>UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter
           RepID=C6E5F4_GEOSM
          Length = 199

 Score =  155 bits (393), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 13/186 (6%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G+++  +RQ+Q L+ +  A+++GL+   +S IE D+V+P I+TL K+ K   + + 
Sbjct: 11  EMKLGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIH 70

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQ----------GVSMKLVHNGNPNRTLAMIFETY 114
            FF   E  D  + ++ + +   +GSQ          G   K +  G   + +      +
Sbjct: 71  YFF--EEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEF 128

Query: 115 QPGT-TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
           +           H+G E   +L+GE+      +   L AG S    +  PH + +     
Sbjct: 129 EQRAWDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVR 188

Query: 174 CRIISA 179
            R ++ 
Sbjct: 189 ARAVAV 194


>UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae
           RepID=A9BI07_PETMO
          Length = 178

 Score =  155 bits (392), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 5/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +R  + ++Q   A  S LT   IS +E+D  SP +  L+ +L+  G  L +
Sbjct: 1   MQIGEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           FFS  E  +  ++V  ++D I +     GV  +L+   +  + +       +PG +T   
Sbjct: 61  FFSNLENKE--KIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIE 118

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSN-TSAGICRIISA 179
             H+G E+G V+EGEI L +N + Y +   +++  +    H   N +S     +I  
Sbjct: 119 KPHEGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSSTNSATLIWI 175


>UniRef50_A9WLK2 Transcriptional regulator, Cro/CI family n=2 Tax=Micrococcaceae
           RepID=A9WLK2_RENSM
          Length = 191

 Score =  155 bits (392), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 4/180 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G R+   RQ Q L+    AE +GLT   +S +E+D  SP++++L  L +V  +S+ 
Sbjct: 12  PVQIGSRIRAARQAQRLTIEHVAEATGLTKGFLSRVERDFTSPSVASLVTLCEVLAISIG 71

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           + F  P       V   +   + +G +G+  +L+   +  R   +  E    G    E  
Sbjct: 72  DLFVAPSTH---LVRAAEGPRVSLGGEGIIERLLTERSERRLQVLHAEIKPFGKGEDELY 128

Query: 125 KHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
               E ++  ++EGE+ L    + Y L  G + +     PHS++N S  I R++   TP 
Sbjct: 129 TVDCEVDVLHIIEGELTLRFTSESYELSTGDTLSFPGREPHSWTNYSDKIVRVLWILTPA 188


>UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZDG4_BREBN
          Length = 185

 Score =  155 bits (392), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 2/176 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +     G+ +  IR+++ LS  + +E++G++ + +  IE+ K +P I+TL K+     
Sbjct: 1   MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LS S   S+  KP+   V   + + I        +  +   NP +   +   T +PG   
Sbjct: 61  LSFSSLISQY-KPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
                  G EE   V EG + + +N Q Y +    +       PH + N    I +
Sbjct: 120 IAEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVK 175


>UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHE5_SYNFM
          Length = 204

 Score =  155 bits (392), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G ++ E+RQ+  L+ +  A  +GL+   +S IE +KV P ++TL +L +   ++L 
Sbjct: 15  AFNIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALG 74

Query: 65  EFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
            FF E  + D   +   ++ +        E G        +     N+++      + P 
Sbjct: 75  HFFQESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEF-PT 133

Query: 118 TTTGE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
               E   + H+GEE   V+EG++      +   L  G S  I + + HSF        R
Sbjct: 134 QEKEEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETAR 193

Query: 176 IISAH 180
            ++  
Sbjct: 194 ALAVV 198


>UniRef50_A4BG67 Transcriptional regulator, Cro/CI family protein n=1 Tax=Reinekea
           blandensis MED297 RepID=A4BG67_9GAMM
          Length = 181

 Score =  155 bits (392), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 2/176 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKRL E+R++ G+SQR  A+  G+T+S IS IE++ VSP++S+LQK+L    ++L E
Sbjct: 1   MNVGKRLQEVRKKAGISQRELAKRVGVTNSTISMIEKNNVSPSVSSLQKVLSGMSMTLLE 60

Query: 66  FFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           FF  E      PQ+    DD  ++ S  V  +L+    PNR L  + ET+ PG     R+
Sbjct: 61  FFEAEDNDIYVPQINYTDDDFQDVSSSQVRRRLLGQYFPNRKLEFVSETFPPGAERRIRL 120

Query: 125 KHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             + G++ G V+ G++VL +  +   L  G  +   +   H F N      ++I  
Sbjct: 121 GVESGDKAGMVISGQLVLILGERTVVLEPGNGFYFESSDVHFFRNEGDTSAQLIVV 176


>UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM
           12804 RepID=A9IK40_BORPD
          Length = 219

 Score =  155 bits (391), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 7/183 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G++L ++R+Q GLS  + A+  G++   +S +E+   SP++  +  L   +G+S+ 
Sbjct: 29  DFWLGQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSVD 88

Query: 65  EFF----SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
                      +             +++  +G+  ++       R+L +      PG +T
Sbjct: 89  SLLRGTGQGGGEAAGRVARAGTHRRVDLLDKGIHKEMYTPP-AGRSLDLCRARIAPGGST 147

Query: 121 GERIKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           G+ +     GE+IG VL+G + L +  Q   L AG S+   +  P  + N  + +  +I 
Sbjct: 148 GDDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVIW 207

Query: 179 AHT 181
           A +
Sbjct: 208 AIS 210


>UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli
           RepID=A5IRY5_STAA9
          Length = 179

 Score =  155 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 3/177 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G ++  +R+ + L+Q   AE + L+   IS IE +  SP++ T   +++V G + SE
Sbjct: 1   MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSE 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           FF + E  +E  +   ++ +I     +G  +  + + +    +  +  T +PG +     
Sbjct: 61  FFKDSE--NEKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDMEPLILTLKPGASYKNFN 118

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             + +     + G+I L +  + Y               H  SN S    RI+   T
Sbjct: 119 PSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVAT 175


>UniRef50_Q7WMB8 Putative DNA-binding protein n=1 Tax=Bordetella bronchiseptica
           RepID=Q7WMB8_BORBR
          Length = 172

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 4/175 (2%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           +  +R     SQR  A  +G+TH+ ++ IE+ ++ P++ TL+ LL   G+S+ +FF    
Sbjct: 1   MQALRVSLSFSQRELARRAGVTHTTVAAIEKGRIDPSLGTLKSLLAACGVSMGDFFRSD- 59

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKHQGEE 130
                  V  +  +  + + GV M+ V    P + L +  E Y  G  TG + ++H+G+E
Sbjct: 60  --RVESAVTEKHKISTVSTGGVHMRYVAPAQPGKLLQLTQELYDVGADTGQKPLRHEGQE 117

Query: 131 IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            G V+ G   L +  + + L  G SY  ++  PH   N       II+A +P +F
Sbjct: 118 GGIVIRGTFELQLGDERHILKPGDSYYFDSTTPHRIRNIGEEEGEIINAASPPSF 172


>UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER
          Length = 196

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 5/172 (2%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L   R++ GL+    AE +GLT S +S +E+   +P+I+   K+ +V    + + FS+  
Sbjct: 5   LRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLFSDSM 64

Query: 72  KPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQG 128
           + +   +V  +D +I+  +  Q      +      + +        P +  G +   H G
Sbjct: 65  EGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPF--VVHPASVMGPKFMDHTG 122

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           EE   V  G +   I GQ  HL AG S   +   PH   + SA    ++   
Sbjct: 123 EEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVV 174


>UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales
           RepID=A8I9H1_AZOC5
          Length = 216

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 2/176 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  L ++RQ++G++  R A  S LT   +S +E+   +P+I+ L ++    G+++++ 
Sbjct: 27  RLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQL 86

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET--YQPGTTTGERI 124
           F     P     +    D   +      +  +      + +     T  ++PG     R 
Sbjct: 87  FDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRW 146

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H GEE   V+ G + + +  +D  L  G S      I H   +      +++   
Sbjct: 147 AHGGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202


>UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2150 RepID=A3JV98_9RHOB
          Length = 195

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 3/179 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E    G+++  +R ++ L   +    + L+   +S IE+ +V P + TL ++  V+G+ L
Sbjct: 11  ESYRIGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGL 70

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQG---VSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             FF E + P    V   +   +    +       + +     +R +      + P    
Sbjct: 71  EHFFEEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA 130

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
            E  +H+G E+  V+ G + + I+   + L A  S   +   PHS+   S      +  
Sbjct: 131 SEPHEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189


>UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium
           caulinodans ORS 571 RepID=A8I731_AZOC5
          Length = 231

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 5/188 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+   A G  + E R  +GLS +R A+ +GL+   +S +E+   SP++  L+ +    G+
Sbjct: 45  SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104

Query: 62  SLSEFFSEPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           ++   F E   P       +   Q   +++G++G+  + +   +   TL ++     PG 
Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSD-LSTLQIMEIILAPGG 163

Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           ++GE    H GEE G V+EG + L I+G  + L+ G S+A  + +PH F N S G+ R++
Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223

Query: 178 SAHTPTTF 185
              TP  +
Sbjct: 224 WITTPPVW 231


>UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH
          Length = 204

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +  L   K L  IR+++ LS  + ++L+G++ + I  IE+ + SP ++T+ K+     
Sbjct: 20  MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119
           +S +   + P +PD   ++ N   ++   S    +        +R   +     +  G  
Sbjct: 80  VSFTSLINNP-QPDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKL 138

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           + E  K   EE  TV EGE+ + IN   Y L +G +       PH++ N    + R+
Sbjct: 139 SSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRL 195


>UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium smegmatis str. MC2
           155 RepID=A0QRJ5_MYCS2
          Length = 189

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 5/177 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL + R+++G+S    A  + +T   +S  E+   + ++  L ++    G+ + + F 
Sbjct: 5   GARLRQFRRERGMSLTDVAAKAEVTKGFLSLAERGMTNVSVPVLMRICDALGIGIGDLF- 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             E P  P V       +EMG  GV  +L+     +  + ++    +PG  +G   +   
Sbjct: 64  --EYPAAPIVRSGAGAPLEMGGHGVREELLTPKTEHH-VQVMRTVMRPGGGSGGAYRLDA 120

Query: 129 EEIG-TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
             I   VL G + +T++G+   L  G          H + N +AG   ++    P  
Sbjct: 121 ATIVAYVLRGALSITVDGETVVLNVGDCLTFGAKQLHDWHNPTAGEAEVLWTIAPPV 177


>UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales
           RepID=B0UAQ2_METS4
          Length = 207

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 3/182 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            LA G+RL  +RQ +GLS +  A  +GL+   +S +E+   SP++  L +L  +  + L+
Sbjct: 23  DLAMGRRLRALRQARGLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLA 82

Query: 65  EFFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122
             F     P EP V    +   + +   G++ +L+     +  L++      PG +TG E
Sbjct: 83  SLFGAAPGPAEPIVTRPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDE 142

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAHT 181
            + H GEE G VLEG + L +      L AG S+   +  PH + N S      ++  + 
Sbjct: 143 ALTHGGEEAGLVLEGRLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNA 202

Query: 182 PT 183
             
Sbjct: 203 VP 204


>UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria
           (class) RepID=A1RBM5_ARTAT
          Length = 206

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   LA G R+ + RQ +G +  + AE +G++   I  +EQ   +P++ TL ++    G+
Sbjct: 12  TTLSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGV 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L      P           +   +    QG    LV        + +   T  PG   G
Sbjct: 72  GLPALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHG 131

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179
                 G  E+  VL G + + ++G    L AG S      + HS++N      R  ++ 
Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAV 191

Query: 180 HTP 182
             P
Sbjct: 192 FGP 194


>UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia
           multivorans RepID=A9ABP2_BURM1
          Length = 281

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M  + +  G+R+  +R++   +    A  + L+   +S +E+     +IS+L  + K   
Sbjct: 1   MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + L     +P +  +P     + +   +       + +        L  +      G  +
Sbjct: 61  VPLGALIDQPRQA-QPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRS 119

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H G+E   VL G I  TI  +DY L  G S   +    H  +N   G   +I+  
Sbjct: 120 -EWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178

Query: 181 TPTTF 185
           T   F
Sbjct: 179 TLPLF 183


>UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri
           RepID=A5N4Z4_CLOK5
          Length = 179

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++ E+R ++GL+ +  +E +GL+   +S  E+   + A+  L  +  V  + ++ 
Sbjct: 1   MNIGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINY 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GER 123
           FF + EK     ++ + D            K +     ++ L+       P       + 
Sbjct: 61  FFDDEEKE---LIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYPDI 117

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             HQGEE   VLEG + L I+   + L  G S    +   H++ N +  + + I+ H P+
Sbjct: 118 YAHQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITVHYPS 177

Query: 184 T 184
           +
Sbjct: 178 S 178


>UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4
           Tax=Actinomycetales RepID=D2BA96_STRRD
          Length = 192

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 3/175 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+ E+R  +GL+ ++ A  + ++ S +S++E+ + +P +  L ++    G+SL+E 
Sbjct: 6   ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLGVSLAEL 65

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
            +EPE            D ++    G    ++    P      I  T  PG   G    +
Sbjct: 66  VAEPEDRRVIVRRAADQDTVD-EPGGWHRSILTPVVPGVNFEWIRTTLPPGCDAGRFPAY 124

Query: 127 Q--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                E   V  G + LT+  Q   L  G S        H + N     C    A
Sbjct: 125 AQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYVA 179


>UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Comamonadaceae
           RepID=A1WEC3_VEREI
          Length = 229

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 6/183 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G++L   RQ  GL  ++ A   G++ S +S +E+   S ++ TL  L +   L + 
Sbjct: 43  DLWLGEQLRRRRQALGLPLQQVARACGISVSLLSQLERGLRSISMRTLGALAQELRLPIE 102

Query: 65  EFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
                      + +           I++G +G+  + +     +  + M      PG +T
Sbjct: 103 TLVRNTRYSEGEAEGAVARAGTHRRIDLGDKGIHKENLTPPAASGGVQMYRAVIDPGGST 162

Query: 121 GE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           G+   + H+GE++G V+EG++ L +  +   L AG S+     +   + N       I+ 
Sbjct: 163 GDDLFLTHKGEQVGYVIEGQLDLFVQERLLKLKAGDSFCYGGDMSRRWRNPGQTSTTILW 222

Query: 179 AHT 181
           A T
Sbjct: 223 AIT 225


>UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LFU9_RALME
          Length = 212

 Score =  153 bits (387), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 8/181 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           +  +RL+E+R+  GL+    A+ + LT S +S +E+   SP I T+ KL    G+++ + 
Sbjct: 29  SIAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQL 88

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            +   + +E  + I   D I         G + + +    P++ +        P T   +
Sbjct: 89  ITRSSRANEI-LHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMV-PPFTLEED 146

Query: 123 RI--KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           +    H GEE+  V+ GE+ +  + +   + AG S   N  IPH   +      + +   
Sbjct: 147 QPMASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVV 206

Query: 181 T 181
           +
Sbjct: 207 S 207


>UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5EUL8_9FIRM
          Length = 186

 Score =  153 bits (386), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 6/181 (3%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  L  G+ +  +R+ + L+   AA  +G++ S ++ IE+  V+P IS L K+   Y +S
Sbjct: 4   NINLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS 63

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMK--LVHNGNPNRTLAMIFETYQPGTTT 120
            +      E   E   VI   D+  +   G +     V   +  +         +PG   
Sbjct: 64  FTSLV---ETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCL 120

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             R    G EE  T+  G+ V+   GQ++ L  G S        H + N   G   +   
Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMV 180

Query: 180 H 180
            
Sbjct: 181 I 181


>UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine
           actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN
          Length = 169

 Score =  153 bits (386), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 4/166 (2%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           ++  + A  S L+ + +S IE+ K +P+ +TL +L     + +  FF    +P  P V  
Sbjct: 1   MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60

Query: 81  NQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGEEIGTVLE 136
                +      S G ++  +     N  +   +    PG  T+     H GEE G V+ 
Sbjct: 61  GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120

Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           G+I + ++G+ + L AG S    +  PH + N     C  I   TP
Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTP 166


>UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178AA45
          Length = 189

 Score =  152 bits (385), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 6/183 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M       G+ L  IR+ +GLS    AEL+G++ + +  IE+   +P IS L +++   G
Sbjct: 1   MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           +S +    E E       V++ DD+           +  + + N             PG 
Sbjct: 61  ISFTTLIEEAETE---VTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGC 117

Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             G    + G EE   V +GE+ L    + Y + AG S   +   PH + N      +  
Sbjct: 118 DHGSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFY 177

Query: 178 SAH 180
           +  
Sbjct: 178 TII 180


>UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RH93_9CLOT
          Length = 184

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+++ ++R+++ L+ +  AE +GL+   IS +E+  V P++S+L+K+ +  G+S     
Sbjct: 2   VGEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP-YLL 60

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP----NRTLAMIFETYQPGTTTGER 123
            +  +     V  +Q  +I+     +  ++V   +       ++ + F+    G  + E 
Sbjct: 61  VDQSEHHPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           + H  EEI  +L+GE  + +    YHL AG S  +   +PH   NT           TP
Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFCVMTP 179


>UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Oceanicola batsensis HTCC2597 RepID=A3TY07_9RHOB
          Length = 213

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 5/182 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+R+ ++R+ +GL+ +  A+ SGL  S IS IE+  ++P       L +  G+ ++  
Sbjct: 22  ELGQRIRQLREARGLTLQTIADRSGLAISTISKIERGLMAPTYDRFSGLARGLGVDVTHL 81

Query: 67  FSEPEKPDEPQVV--INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGE 122
           FS   +  E   V      +   + ++  + +++      + +  +  T +P    +   
Sbjct: 82  FSPGGRRFEAGTVALARAGEFGFLETENYAYEMLFPDVRGKAMIPMCGTLKPLQKMSFER 141

Query: 123 RIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            + H GEE   V+ G +V+ + G ++  L  G S   ++G  H ++       RI+   T
Sbjct: 142 MVNHPGEEFLMVMSGRVVVQLEGREEIVLDTGDSLYFDSGRGHLYAAEGDEGARILVVCT 201

Query: 182 PT 183
             
Sbjct: 202 AP 203


>UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI
          Length = 178

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GKRL E+R  +G+S R  A+ +G++ + +S IE+    P++STL+ L  V+G S++  F
Sbjct: 2   LGKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALF 61

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126
            +P  P        +   I      VS + + +G  N  + ++   + PG  +    I H
Sbjct: 62  RDPAAPSVWLSRPGERTQITGPKGTVSYERLTHG--NAPMEVLRAVFVPGQYSVAGTISH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
              E   V+ G + + + G  + + A ++   +    H + N  A    I+ + TP  
Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTPPI 177


>UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus
           JCSC5402 RepID=B9E9Z3_MACCJ
          Length = 167

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 79/175 (45%), Gaps = 10/175 (5%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G+ + +IR+++ L+ ++ AEL+ L+   +S +E +K    ++T++ +     +  S+
Sbjct: 1   MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF E              D++    Q    + +   +       +    +PG T  E ++
Sbjct: 61  FFYEHASLM---------DVLNAKRQSFYYEQLAY-DKGSPFIPLKVKLKPGNTDLEYVQ 110

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           H G E    L+G + ++++  +  L  G+S   +   PH + N +  +   +  +
Sbjct: 111 HDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVIN 165


>UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FWR1_9CLOT
          Length = 204

 Score =  152 bits (384), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 16/195 (8%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G ++  +R Q+ ++ +  +E + L+   +S +E+   S A  +L+K+  V  + L+ F
Sbjct: 4   NIGAKIKRLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLEKIADVLEVDLTYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F +P++  +  +   + ++ E+         + +   ++ +        PGT   +   +
Sbjct: 64  FMKPKEHKKTVIRSYEKEVFEITDGKYINYHLSSNLTDKIMFPKLIEILPGTAESDGFNY 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAI------------NT---GIPHSFSNTSA 171
            GEE   VLEG + L +   +  L  G S               ++      HS  N + 
Sbjct: 124 SGEEFIYVLEGILTLNMAESEVDLYPGDSIHYSYKNKVMLKNGEDSKIVNQNHSLLNKTN 183

Query: 172 GICRIISAHTP-TTF 185
            + ++I    P   F
Sbjct: 184 KVTKVIIVSVPNPYF 198


>UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR68_RHOBA
          Length = 233

 Score =  152 bits (384), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 3/175 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +   +RL ++R  +G++    A+ SG T S +S +E  +++P++  L  L    G+S S 
Sbjct: 53  VELAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSS 112

Query: 66  FFSEPEKPDEPQVVIN--QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
                +   +   V +  +  +       +    + +   +RT+        P     E 
Sbjct: 113 LLEGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKI-PSGEEREP 171

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             H+GEE  TVL+G +      Q++ L  G S   ++ + H  +N  A    +I 
Sbjct: 172 RTHEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVIC 226


>UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31672
          Length = 196

 Score =  151 bits (383), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 5/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R+   LS R  AE SG++   +S +E+ + SP +    ++     L LS+ 
Sbjct: 11  AIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQL 70

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GER 123
               E+     V + +         G   +++    P +   +      PGT T   G+ 
Sbjct: 71  LRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDP 130

Query: 124 IKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             H+    E   +  G +VL  +G  Y L AG +   +  +PH F N       +++  +
Sbjct: 131 PVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVS 190


>UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales
           bacterium Y4I RepID=B6BB48_9RHOB
          Length = 218

 Score =  151 bits (382), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 6/183 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E    G +L  +RQ + +   +  E +GL+ + +S IE+ +V P ++TL ++  V+G+ L
Sbjct: 27  EAYRIGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGL 86

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118
             FF   E     ++V  Q D +++G +         + +               +    
Sbjct: 87  DHFFGPGEDAPVLEIV-RQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEFSGNG 145

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +      H G E+  V+EG + L I+G+   L  G S   + G  HS+       CR + 
Sbjct: 146 SESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALV 205

Query: 179 AHT 181
             +
Sbjct: 206 VVS 208


>UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF
          Length = 180

 Score =  151 bits (382), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 73/176 (41%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKR+  +R  + L+Q    E + LT   IS +E+D  SP+I TL  +L+V G +  +
Sbjct: 1   MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF E E   +      +    E   +G  +K +   +  + +  +    +  +       
Sbjct: 61  FFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              E    VL+GE+ + +   +Y    G++   +    H   N S     +I   T
Sbjct: 121 SLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSNEQATLILVAT 176


>UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella
           bronchiseptica RepID=Q7WPD8_BORBR
          Length = 201

 Score =  151 bits (381), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D+    G+ +  IR+++ +S +  A  SG+    +S IE+D  +P++ TL ++ +   +
Sbjct: 3   ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62

Query: 62  SLSEFFSEPEKPDEP----------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111
            LS  F   ++                      +++ G+  ++ +++      R L  + 
Sbjct: 63  PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQR-LQFMV 121

Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
              QPG T+G     +  E+ G VL+G   L ++GQ   L  G S+  +   PH F N  
Sbjct: 122 LNIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181

Query: 171 AGICRIISAH 180
                I+   
Sbjct: 182 DEPASILWII 191


>UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter
           usitatus Ellin6076 RepID=Q026G4_SOLUE
          Length = 225

 Score =  150 bits (380), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 6/185 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G++L ++R ++ ++       +GL+ S +S +E  K+ P ++TL ++  V+ + L 
Sbjct: 39  AYDIGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLE 98

Query: 65  EFFSEPEKPDEPQVVINQD-----DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
            FF          +V   +     +  +        + +     ++ L      + P   
Sbjct: 99  HFFGNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRA 158

Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              +   H+G E+  VLEG + +   G+D+ L  G S   ++  PHS+   +    R I 
Sbjct: 159 ADVQEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIV 218

Query: 179 AHTPT 183
             TP 
Sbjct: 219 VTTPP 223


>UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum
           RepID=A6X8F8_OCHA4
          Length = 202

 Score =  150 bits (380), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 4/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+   RQ  GL+    +E+SGL+  A+S IE+  VSP + TL  + +V  +S ++ 
Sbjct: 22  DIGARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMSPAQL 81

Query: 67  FSEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
                          V+   +  E+ + G  +K   +     T+        PG ++GE 
Sbjct: 82  IDPQGFAAAARANPYVLRAGEQPEVLNAGGVIKHRASPELIETMKSFAVRIIPGGSSGEE 141

Query: 124 -IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
              H GEE+G V+ G   L I    Y L AG  +A+ +   H F N       ++  + P
Sbjct: 142 CYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGEAEAFVLWVNKP 201


>UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1S464_9ACTO
          Length = 214

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+   R+++GL+ R  A  SGL+   +S +E+   S  ++ L  + K    S+++FF
Sbjct: 28  VGGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFF 87

Query: 68  SEPEKPDEPQV---------VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
                  +  V            +    +  S   + +++ +  P+  L  +     PG 
Sbjct: 88  DAGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGG 147

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                  H+GEE   V+ GE++  + G ++ L  G S  + + +PH   N +  +  ++S
Sbjct: 148 RRENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDAVTTVVS 207

Query: 179 AHTPTTF 185
             TP  F
Sbjct: 208 VVTPRLF 214


>UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales
           RepID=A1BBT3_PARDP
          Length = 184

 Score =  150 bits (378), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+ +  +R+ +G++    A   G +   +S +E+ + +P++  L ++    G+++S FF
Sbjct: 5   VGEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFF 64

Query: 68  -SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
            S    P+E  +V+   D   +GSQ  G+  +L+       +  MI  T+ PG ++G R 
Sbjct: 65  RSSSRAPEERGLVLRAADRTPIGSQESGLVEELLSPTLSG-SFEMIKSTFAPGASSGGRR 123

Query: 125 KHQGEEIGTVL-EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           K + +E G VL  G + L I  ++  L  G S+       +++ N        I   +P 
Sbjct: 124 KARPKEDGGVLISGRLTLIIGDREIQLEPGDSFQFR-ETDYAWRNDGKEPAVAIWIVSPP 182

Query: 184 TF 185
            +
Sbjct: 183 IY 184


>UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA
          Length = 224

 Score =  149 bits (377), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 3/173 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           RL  +R+Q+G +    AE +GLT S +S +E+    P+I+   KL K   + + + FSE 
Sbjct: 43  RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102

Query: 71  EKPDEPQVVINQDDLIEMGS--QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
            +  E   V        MGS     + + +  G   + L            +    +H+G
Sbjct: 103 -RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFREHEG 161

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           EE+  V +G + +    +   L  G S   N  IPH   +       ++   +
Sbjct: 162 EEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVVS 214


>UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA
          Length = 180

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 6/171 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +R+Q+GL+  + A+ +GLT S +S IE+ + +P+I+   K+ +   + +   FS+  
Sbjct: 5   LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG---TTTGERIKHQG 128
             +        D L   G Q     ++ +    +T++        G    + G   +H G
Sbjct: 65  AHETITADRAHDRL---GPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTG 121

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           +E   V  G + L    Q   L  G S   +  + H           ++  
Sbjct: 122 QEFVFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172


>UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34
           Tax=Burkholderia RepID=Q39C45_BURS3
          Length = 286

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M  + +  G+R+  +R++   +    A  + L+   +S +E+     ++S+L  + K   
Sbjct: 26  MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + LS    +P +         +             +L    + ++  A+  +  +     
Sbjct: 86  VPLSALIDQPRQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMME--GYR 143

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H G+E   VL G I  T+  +DY L  G S   +    H  +N   G   +I+  
Sbjct: 144 SEWVAHGGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203

Query: 181 TPTTF 185
           T   F
Sbjct: 204 TLPLF 208


>UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces
           RepID=B5HZF0_9ACTO
          Length = 201

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 4/187 (2%)

Query: 1   MSDEGL---APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           +SD  L   +  + +   R ++G +    A  +G++   +  IEQ + +P++ T+ K+  
Sbjct: 12  VSDLDLLTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGD 71

Query: 58  VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
             G+S++      + P    V   Q   +     G   +L+        L M      PG
Sbjct: 72  ALGISITTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPG 131

Query: 118 TTTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
            ++       G  E+  V+ GE+ LT++G ++ + AG S +     PH++ N  A    +
Sbjct: 132 ESSPSDPHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEM 191

Query: 177 ISAHTPT 183
           + A +  
Sbjct: 192 VMAVSVP 198


>UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria
           RepID=D2R569_9PLAN
          Length = 202

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+  +R+ +G +  + A LSG++ S +S IE+   +P +    ++ + +G++L +    P
Sbjct: 21  RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80

Query: 71  EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           E P     VI  DD   +        ++ +   +  + +     T + G     +   +G
Sbjct: 81  EPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGKLESQPHFEG 140

Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             E  TV +G + LT   +   L  G S      +PH   N   G   +   
Sbjct: 141 TREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFLV 192


>UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C444_9CLOT
          Length = 199

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           ++D  L  G  +   R+++G++ ++ +E +GL+   +S +E++  SP +  +QK+ + +G
Sbjct: 18  LNDIQL-IGYSIRSQRRKKGMTLQQLSEATGLSIGYLSNLERNANSPTLVNIQKICEAFG 76

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTT 119
            S    FS  E   E  +++  ++   + S+  +MKL +        + I+ T +P G  
Sbjct: 77  TS---LFSLLEMNKEEDIIVRHNEREPIISEEHNMKLENIDFGLDDTSFIYMTIEPDGAG 133

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G   +H+  E+GTV++G + L ++ Q + L  G +  I     H + N +   C    
Sbjct: 134 DGLWWEHEYHEVGTVIKGRLTLKLDNQVFELDEGDTILIKAHTRHCYYNKTQESCVSYW 192


>UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis
           ATCC 14580 RepID=Q65LQ1_BACLD
          Length = 183

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 67/177 (37%), Gaps = 6/177 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+       + +  +R+ +  S  + + ++G++   ++ IE+   SP I+TL K+     
Sbjct: 1   MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           +S +      E+P     V+ + +   +  G +  +       +  +   + +    PG 
Sbjct: 61  VSFTSL---AERPAGEPTVVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGC 117

Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                  H G EE   V +G + +T       L  G +        H++ N +    
Sbjct: 118 VHESEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTA 174


>UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2
           Tax=Cronobacter RepID=C9Y503_CROTZ
          Length = 204

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 10/175 (5%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D      + L  +RQQ+  S  +AA+ +G++ + +  IE+++ SP ++TL K+   + + 
Sbjct: 30  DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            S F + P               +    Q + ++ +   +      M+  T  PG  +  
Sbjct: 90  FSVFITPPAPG---------ARTVFDAQQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDS 140

Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                G  E   V+EGE+ L  +G    L  G+        PH++ N +    R 
Sbjct: 141 TPHENGVTEHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRF 195


>UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JMT2_AGRRK
          Length = 200

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 5/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + +  GKR+  +R    ++ +  +  SG++ SAIS IE +++SP    + KL +  G+ +
Sbjct: 10  DEMDLGKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDI 69

Query: 64  SEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119
           SE FS+P  + P   +    +     + ++    +++      + +  +  T +      
Sbjct: 70  SELFSDPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRD 129

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G+ I H GEEI  VL G + L     +   L  G     ++ + H+      G   +  
Sbjct: 130 FGKLIAHVGEEIVVVLSGRVELRTEFYEPLVLEEGDCAYFDSTMGHACLAAGDGDAELFW 189

Query: 179 AHT 181
             +
Sbjct: 190 VCS 192


>UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium
           RepID=B1M8P3_METRJ
          Length = 202

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   +   + +   R++QGLS    A  SG++ S IS IE+ +  P+   L +L +  G+
Sbjct: 16  TSPQIHIAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGV 75

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           + S   +   + +   +  ++  ++   + G   + +    P R +  +  T  PG +TG
Sbjct: 76  TFSRLMAPATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTG 135

Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           E   H+    E   VL G +   I  +   +  G S        H+F+N     C     
Sbjct: 136 EFTAHRRGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLV 195

Query: 180 HTP 182
             P
Sbjct: 196 IDP 198


>UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM0_DESHD
          Length = 181

 Score =  148 bits (375), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 3/178 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+ +  IR+++ L+  + A+   L++  IS IE++ VSP+++TL+++ +   + L  
Sbjct: 2   IEVGEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLES 61

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF +P+  +     + +D+   + ++G + +L+ + +    +                  
Sbjct: 62  FFLDPDT-EIIYSYLKKDEQQYIPAEGRNWRLLIDHSKTNLMGAF--VVDSTAVDKNVYS 118

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           HQG E+  VLEGE  L I+ +DY L AG S   +  I H  +       ++I   TP 
Sbjct: 119 HQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIVIATPP 176


>UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145
           RepID=A3WK19_9GAMM
          Length = 174

 Score =  148 bits (374), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 11/181 (6%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      +RL ++R+ +G S    AE +G++ + +  IE+ + SP ++TL KL   + 
Sbjct: 1   MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +SLS   ++ ++P             +   + + ++ +   +P     +       G  +
Sbjct: 61  VSLSWLLNDEQQPMT----------FDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQS 110

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 +G  E+  V  G + + +      + AG++Y  +   PHS+ N  +G    ++ 
Sbjct: 111 HSDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAV 170

Query: 180 H 180
            
Sbjct: 171 I 171


>UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
           DSM 7454 RepID=B6WAA2_9FIRM
          Length = 212

 Score =  148 bits (374), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 12/191 (6%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D+    GK +   R  Q LS ++ AE   ++ S +S IE  K +P+++TL+ + +   + 
Sbjct: 26  DQMDKLGKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVP 85

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQG------VSMKLVHNGNPN--RTLAMIFETY 114
           +   F E +   +  +++ +++ I + ++G      +S  L+        +   M    Y
Sbjct: 86  MFTLFIEEDI--DRPILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAY 143

Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           Q  +       H GEE+     G+I L +  +   L  G S  I     H + N S   C
Sbjct: 144 QYNSDNFNF--HNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATC 201

Query: 175 RIISAHTPTTF 185
            II + +P  F
Sbjct: 202 AIIFSISPPIF 212


>UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2
           Tax=Bacteria RepID=Q1AWJ9_RUBXD
          Length = 203

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D     G+R+  +R+++GL+    A  SG++ + IS +E+ +  P +    +L +  G+
Sbjct: 11  EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           SLSE   E E+     V   +   +     G   +L+  G   R +  I      G+T+G
Sbjct: 71  SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130

Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           E   H+   EE   V  G ++  + G ++ L  G +      +PH F N   G C     
Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190

Query: 180 H 180
            
Sbjct: 191 I 191


>UniRef50_A5I178 DNA-binding protein n=12 Tax=Bacteria RepID=A5I178_CLOBH
          Length = 177

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 3/174 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++   R+++GL+ +  +EL+ L+   IS +E+D  SP++S LQ++ +V G++L E
Sbjct: 1   MQLGEKIKYYRKKKGLTIKELSELTNLSIGFISNLERDLNSPSVSNLQQICEVLGINLME 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124
                E  +      ++ ++     + +  +++ NG  N+ L  I  T +  T   +   
Sbjct: 61  ILKSTEDKEYIVCKDSRSEIFSTDDKKIKFEMLTNG--NKNLNAIAITIEGNTDYNDTSW 118

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            H  +E+G V++G + + +N Q Y L  G S  +N   PH + N    I     
Sbjct: 119 GHSYDELGIVVKGTLEIQMNSQTYTLHEGDSIYLNKFTPHRYKNPYEEINVTYW 172


>UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM1_DESHD
          Length = 179

 Score =  147 bits (372), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 7/183 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D     G  +  +R+ Q LS +  AE + LT S +S IE++  SP++ TL+K+    G
Sbjct: 1   MAD----LGSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALG 56

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             +S FF  P+      +       I++        L++N      L            +
Sbjct: 57  YPISSFFVNPQFTST-HIPAEAQRTIQINPGMTLRFLINNVGQRNQLGAYIAEVA--DLS 113

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E I H G ++  VLEGE+   +  ++++L  G S   N  +PH  S  S    ++  A 
Sbjct: 114 EEIIIHHGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVAT 173

Query: 181 TPT 183
           TP 
Sbjct: 174 TPP 176


>UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=Desulfococcus
           oleovorans Hxd3 RepID=A8ZUX9_DESOH
          Length = 433

 Score =  147 bits (371), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 8/189 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M    L  G R+ E+R ++G+SQ   A   G+T S IS +E +++ P++  L K+ ++  
Sbjct: 246 MRSGSLDLGLRIKELRTKKGMSQVALARGIGVTPSTISQVENNQIFPSVPALIKMSEILS 305

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVH-----NGNPNRTLAMIFETYQ 115
           + +  FF        P+VV ++ + +     G++ +L+        +            Q
Sbjct: 306 VDVGYFFQTG-AGSAPRVVFSEFEAMPSPVPGMARRLISCRRLMPEDMEAQCVPYIIEIQ 364

Query: 116 PGTT-TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           PG    G     +GEE G ++EGE+ +T+      L  G    +   +P  + N      
Sbjct: 365 PGAVLDGHFFSLKGEETGFLMEGELHMTLGHGAQPLQTGDLVYLAAEVPSQWENRGKLPA 424

Query: 175 RIISAH-TP 182
           R++    TP
Sbjct: 425 RLLWITATP 433


>UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905
           RepID=A3IAI3_9BACI
          Length = 188

 Score =  147 bits (371), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 4/179 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GK+++ IR+++G+S +  + LS ++ S +S IE+   +P I+   ++ +    +LS 
Sbjct: 1   MEFGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSA 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
                E  +   +   +  +    S G    L+    P+R +  +     P + +G    
Sbjct: 61  LLDSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPA 120

Query: 126 HQG--EEIGTVLEGEIVLTINGQDY--HLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           H+   +E   V +G + + ++   Y   L  G S+       H F N +   C      
Sbjct: 121 HKSGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179


>UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium
           zucineum HLK1 RepID=B4RGE3_PHEZH
          Length = 206

 Score =  147 bits (371), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 5/187 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
             + +  G  +   R++ GL+ +  AE SGL+ + IS IE+ K +P+I +L ++    G+
Sbjct: 18  RKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGV 77

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            ++ F       +E  +   +D          +   + N  P + L  +    QPG  + 
Sbjct: 78  GVNHFV--EATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISE 135

Query: 122 ERIK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                  H GE    VLEG +     G  + L  G S         + SN      +++ 
Sbjct: 136 AANIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLW 195

Query: 179 AHTPTTF 185
             +   F
Sbjct: 196 VGSVVLF 202


>UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria
           RepID=B3QIN2_RHOPT
          Length = 207

 Score =  146 bits (370), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 4/182 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D     G  L  +R +QG S  R A+ SG++ + +  IE  K  P I TL K+    G+ 
Sbjct: 21  DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            +   +  E P  PQV+   D  +   +QG  + + +   +  R +        P     
Sbjct: 81  FARLIAT-ETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHRED 139

Query: 122 ERIKHQG-EEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 G  E   V +G + +T    +   L AG +   +  +PHS+ N  A    +   
Sbjct: 140 ADPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLV 199

Query: 180 HT 181
            T
Sbjct: 200 MT 201


>UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QJV6_DESAH
          Length = 190

 Score =  146 bits (370), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 8/176 (4%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE- 69
            +   R  + L+ +  A+ +GLT   +S +E+ + +P  STL K+     + ++   S+ 
Sbjct: 9   NIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALEVEITTLLSQG 68

Query: 70  -PEKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
                + P  +  +     +       G   +L+    P + +                 
Sbjct: 69  IDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIHAPFEAQR--TY 126

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H+GEE   V++G++        YHL  G +   ++ IPH   +      +++   
Sbjct: 127 SHEGEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEKSKLLVVI 182


>UniRef50_Q0RYS8 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1
           RepID=Q0RYS8_RHOSR
          Length = 254

 Score =  146 bits (370), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  L   R  + LS R+ A+  G++ S +S +E  K  P++ TL  L  V  +SL + 
Sbjct: 36  EIGVALKRARLDKKLSLRQVADQLGISTSLLSQVENGKTQPSVKTLFGLATVLEVSLDKI 95

Query: 67  FS---------EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
            S           ++     +    D+ +     GV+ + +  G     +  ++ TY+ G
Sbjct: 96  LSGRSGLDIELPADRDAAAGIQRAADNPVLEMENGVTWQRLATGGRTE-IEPLYVTYEVG 154

Query: 118 TTT---GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
            ++   G++++H G E   +LEG + L ++  ++ L  G S+  ++  PH F N      
Sbjct: 155 ASSSVDGKQMRHDGAEFAYILEGTLRLRLDFDEHDLGPGDSFCFDSSRPHLFYNPGTVPA 214

Query: 175 RIIS 178
           R + 
Sbjct: 215 RGVW 218


>UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces
           RepID=D1XSL5_9ACTO
          Length = 206

 Score =  146 bits (370), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 3/180 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +DE      RL ++R+ +GL+   AA  + L+ + +S +E  +  P++  L  L ++YG 
Sbjct: 12  ADEVPGVAPRLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGT 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           ++SE     E P E   ++     +  G++    +    G   R +  +      GT + 
Sbjct: 72  TVSELLG--EMPPERDAIVRGGP-LGAGAEADGWRYRQAGGSGRAMQALRVHVPHGTESE 128

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H GEE   VLEG + + +    + L AG S   ++  PH  +       +++  HT
Sbjct: 129 LVRVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188


>UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ERF8_OCEIH
          Length = 189

 Score =  146 bits (369), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 4/175 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G ++ ++R +   +Q++ A+  G++ S +S IE  + + AI+TL K+     + L+  
Sbjct: 8   SIGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDALKVPLAWL 67

Query: 67  FSEPEKPD-EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP---GTTTGE 122
             + E+ D   Q   N+   +   S G S +L+ N +    +        P        +
Sbjct: 68  LDDKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTPKHRNLRQDK 127

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
              H  +E   +LEGEI L  NG+   L  G S       PH F   +     ++
Sbjct: 128 TYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLFLPVNDRGAMVL 182


>UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium
           RepID=Q18AY1_CLOD6
          Length = 183

 Score =  146 bits (369), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++    G+ L  +RQ+ G+S  +A++++G++ + +  IE+ + SP +STL K+   + 
Sbjct: 1   MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGT 118
           ++ +   +E     E   VI ++++  +  Q  +MKL  ++  +P R   +     +   
Sbjct: 61  INFTTLLNENTNTYE---VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENC 117

Query: 119 TT-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           T       H  EE   V+EG++ L ++G+ Y L +G S   +  + H + N + G  
Sbjct: 118 THVSSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKT 174


>UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12
           Tax=Bacteria RepID=Q1AT52_RUBXD
          Length = 220

 Score =  146 bits (369), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +     G  + + R ++GL+    +  + ++ S +S IE  + SP++ T+ +L +  G++
Sbjct: 23  NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLV-HNGNPNRTLAMIFETYQPG 117
           LS  FS  + P +   ++     +E+      +G +  L+ +N  P +       T +  
Sbjct: 83  LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNK 142

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
           + T    +H G E   +LEG++        Y L  G +   +  IPH
Sbjct: 143 SETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPH 189


>UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota
           RepID=Q468H3_METBF
          Length = 192

 Score =  146 bits (369), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS+E    G ++ ++R+ + ++    AE S  +   I  +E   + P+++ L K+ +  G
Sbjct: 1   MSEEN-RVGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59

Query: 61  LSLSEFFSEPEKPDEPQVVIN-QDDLIEMGSQGVSMK-------LVHNGNPNRTLAMIFE 112
           + L  F  +  +     V     D+++    +    +        + +   +R +     
Sbjct: 60  VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119

Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
              P      ++  H+GEE   +L GEI +      + L AG S   ++ IPH       
Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179

Query: 172 GICRIISAHTPT 183
              +I++     
Sbjct: 180 EDAKILAVVYAP 191


>UniRef50_Q0FY73 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi
           HTCC2506 RepID=Q0FY73_9RHIZ
          Length = 154

 Score =  146 bits (368), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)

Query: 36  AISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ---- 91
            +S IE  KV P ++ L+KL     ++++ FF    KP++      +  ++ +G+     
Sbjct: 1   MLSKIETAKVRPTMTMLRKLADELHVNIAFFFETYSKPEDVVHRQGERPILNVGAASEEV 60

Query: 92  GVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLV 151
            + ++ +   +    L       +PG +T     H GEE+G VLEGE+ +T+  + Y L 
Sbjct: 61  AIRLERLPPMSRQSLLEANIHIVEPGGSTEGAFSHVGEEMGFVLEGELTITVADETYRLR 120

Query: 152 AGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            G S+A ++ + HS+ N    + RI+  +TP +F
Sbjct: 121 TGDSFAFSSTLLHSYKNEGDRVARILWVNTPPSF 154


>UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Nakamurella
           multipartita DSM 44233 RepID=C8XAN3_NAKMY
          Length = 225

 Score =  146 bits (368), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 6/185 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           ++E    G +L  IR+ Q  +    AE SGLT   +S IE+D  S +++ L ++    G+
Sbjct: 12  NEETARIGAKLKAIRRAQRRTLEEVAEASGLTKGFLSKIERDLASASVAALLRICATLGI 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            LS  F      +   V   Q   I+ G Q +    +      R + ++    +PG  +G
Sbjct: 72  PLSSLFESDSTGE--VVRAGQYPRIDFGGQDLEEYQLTP-FAERRVQVLRSDIRPGGGSG 128

Query: 122 -ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIIS 178
            E      E E   V+ G + +    +   L  G ++  +  + H+F   +   +  ++ 
Sbjct: 129 PEAYSLPAEVEFAYVVTGRLAIGFADRTVELGPGDAFTFDATVNHTFRAEAVDELTTVLW 188

Query: 179 AHTPT 183
              P 
Sbjct: 189 VLCPA 193


>UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales
           RepID=Q21W54_RHOFD
          Length = 273

 Score =  146 bits (368), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 6/182 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R    RQ+Q LS  +A++LSGL  S IST E+      +++LQ+L   Y  S+++  
Sbjct: 94  LGVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNTSVTKLT 153

Query: 68  SEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           +     EK     V  N+  +    + G+++  +     +  L     T QPG  +    
Sbjct: 154 APEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAENLES--LDCQKWTLQPGAGSDGAY 211

Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            H+GEE   +L+G + +TI+ G+   L  G S + ++   H++         ++  +TP 
Sbjct: 212 SHEGEEFIHILQGVLTITIDGGEQISLGEGDSISFSSQSAHAWRAVGDIPTMLLWINTPK 271

Query: 184 TF 185
           +F
Sbjct: 272 SF 273


>UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TMW2_9PROT
          Length = 218

 Score =  145 bits (367), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 4/175 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  + + R  + ++    A   GL+ S +S +E+     ++  L ++    G ++ + 
Sbjct: 10  RIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALGGTIHDL 69

Query: 67  FSEPE--KPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
              P+    D    V    + +   + + G     V  G   R +           +   
Sbjct: 70  IGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSAAGSADT 129

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           R  H GEEI  VLEG +   +  +   L  G +  + + IPH+         R++
Sbjct: 130 RFAHPGEEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPARVL 184


>UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B58B91
          Length = 197

 Score =  145 bits (366), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 70/182 (38%), Gaps = 3/182 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           SD  +  G  +  +R   G++ R  AE  GL+   +S  E+   S ++++L  +     +
Sbjct: 4   SDPAVRVGAEIKRVRSSLGMTLRELAERCGLSPGFLSLAERGVNSISLTSLFAIAGALEV 63

Query: 62  SLSEFFSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
              E      K    +  +++ D      +       +++    P++ + ++     P  
Sbjct: 64  DAVELLGSAGKRSRAEYAVSRRDDPRAARVVMGEREHRVLTAELPDQHIEVLATRVNPTN 123

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                 +H GEE   V+ GE+   +  +   L AG +    +  PH+  N    +  ++ 
Sbjct: 124 APSPVTRHDGEEFCYVVSGELTFLMPDESVVLAAGDAIHFKSSTPHAVHNQGDVVAEVLW 183

Query: 179 AH 180
             
Sbjct: 184 TV 185


>UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO
          Length = 189

 Score =  145 bits (366), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
              R  E+R+ +  S R AA+ +G++ S +S IE+   SP  + L KL + +G+S+S+  
Sbjct: 5   LATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLV 64

Query: 68  SEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125
              E   +  V+   +  +  + + G   + +    + N  +  +     P  ++G    
Sbjct: 65  GGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPP 124

Query: 126 HQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180
           H+   EE  TV  G + L +  + Y L AG +      + H F N S           
Sbjct: 125 HRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFIVI 182


>UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO
          Length = 207

 Score =  145 bits (366), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A  +++ ++R  +G S    A  SG++   +  IE  + +P+I TL ++   +G+S++  
Sbjct: 14  AVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSIARL 73

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-TGERIK 125
               E+        ++  ++  G  G   +L+        + +     +PG         
Sbjct: 74  LEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWRMEPGEALRSPDHA 133

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           H   EI  VL+G   +T++G D+ + AG++   +    H +     G  R++      +
Sbjct: 134 HGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLMMVVVTPS 192


>UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes
           RepID=B0MBC4_9FIRM
          Length = 180

 Score =  144 bits (365), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 2/173 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L   K +  +R++Q LS    ++LSG++ S ++ IE+   +P ISTL K+     +   
Sbjct: 2   NLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPFD 61

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
                P+ P E     + + L+E  S  V    +   + +R  A+ +   +P +      
Sbjct: 62  ALTVRPKTPYEIIKTADIEPLLE-DSGRVKNYPLFPDDADRKFAVYYLKLEPYSRWESEA 120

Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
             +G  E  TV  G++ +  +   + L   +S        HS+ NT      +
Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVL 173


>UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus
           RepID=A9A888_METM6
          Length = 209

 Score =  144 bits (365), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      K L +IR + GLS    ++L+G++   +  IE+++V+P IST+ K+     
Sbjct: 26  MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT- 119
           +S +   SE E  D   V +N    I   S+      V N   +R   + +    PG   
Sbjct: 86  ISFTSLLSEKEA-DVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVM 144

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           + +      EE  TV EGE+ L+I  + Y +  G S      +PH + N S+ +  I
Sbjct: 145 SSDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVI 201


>UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SLI4_HAHCH
          Length = 192

 Score =  144 bits (364), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 1   MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M D  L    GKR+ ++R+ + L+  + A+ S ++ S +S IE+ + +P  +TL  L + 
Sbjct: 1   MKDTDLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRA 60

Query: 59  YGLSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
            G+  SE   E E         ++  Q   I+    G  + ++   +   ++       +
Sbjct: 61  MGIEWSELVDESEGVSHSPIEHIIAAQTPKIDNPQGGYHLSILSPPHLVGSIEWYELRMR 120

Query: 116 PGTTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           P      +   QG  E  TVL G++ +    Q   L  G +   +  + H+  N      
Sbjct: 121 PQGKLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDT 180

Query: 175 RIISAH 180
             +   
Sbjct: 181 IALLVV 186


>UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium
           RepID=C7IC10_9CLOT
          Length = 184

 Score =  144 bits (364), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 2/175 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      + L  +R+++ LS    A+LSG++ S +  IE+ +V+P +ST+ K+     
Sbjct: 1   MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S+  +  E   E   + N   L+E     V +    + +  R   +    +Q     
Sbjct: 61  VSFSQLVNHTETNVEIVDIKNLKPLLE-DEGRVRIYPTFSFDSTRRFEIYSLEFQTNGYL 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                 QG +E  TV  GE+ +T+  + + +  G++       PHS+ NT    C
Sbjct: 120 STEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANC 174


>UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia
           RepID=B9R695_9RHOB
          Length = 183

 Score =  144 bits (364), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 5/185 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D+ LA  +RL  +R+ +GLS    AE SG++ + +S IE+   SP  + L +L   +G
Sbjct: 1   MNDQDLA--QRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118
           +S+++ F       + ++  N+  +      G   + V         ++I  T   G   
Sbjct: 59  VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-II 177
           +         E    +L G + + +    + L  G         P+++  T +   R ++
Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178

Query: 178 SAHTP 182
           +  TP
Sbjct: 179 TVITP 183


>UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8D0X7_HALOH
          Length = 182

 Score =  144 bits (364), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M++     GK+L ++R  +G S     E++G++ S +  IE+ K +P + TL K+ +   
Sbjct: 1   MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S FF E E         +++ L+        +  +   N  +   +     +PG + 
Sbjct: 61  VPFS-FFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSY 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                 QG EE   V EG + LT+N ++Y     +         H + N S    + 
Sbjct: 120 KSEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKA 176


>UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FE71_DESAA
          Length = 527

 Score =  144 bits (364), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 5/178 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G  + ++R+    ++   A+ +G T   I+++E D++SP++S L +L +  G+    F
Sbjct: 353 SFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPGTF 412

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125
             + EK     +   +       +Q  S +++     N  L     T +          K
Sbjct: 413 LRDEEK---SAIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVEYK 469

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-HTP 182
           H+GEE   VL+G++ LT++ + + L  G+S   N+ IPH   + S    R +   +TP
Sbjct: 470 HEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527


>UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO
          Length = 204

 Score =  144 bits (363), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 4/180 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            +  +     L E+R++ GL+   AA+ + L+ + +S +E  +  P++  L  L + YG 
Sbjct: 10  EELAVTVAPHLRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGT 69

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           ++SE     E P  P  V+    +    + G +     +G   R +  +      G+   
Sbjct: 70  TVSELLG--ETPAGPGAVVRAGTMEPTEAGGWTYW--QSGGSGRAMQALRVRVPYGSQGD 125

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H GEE   VL G + L +    + L  G S   ++  PH  +        ++  HT
Sbjct: 126 IVRVHPGEEWLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185


>UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1A8D2_THECD
          Length = 187

 Score =  144 bits (363), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%)

Query: 1   MSDE---GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M+D+   G A  + +  +R   G S  + A  +G++   +  +EQ + +P + TL ++ +
Sbjct: 1   MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60

Query: 58  VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
             G+ L+      E+P        +  ++  G  G S  L+       ++ +     +PG
Sbjct: 61  ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                     G  EI  V EG + +T++GQ + + AG +       PHS+SN    +CR 
Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180

Query: 177 I 177
           +
Sbjct: 181 V 181


>UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium
           sp. Marseille RepID=A6T0N3_JANMA
          Length = 221

 Score =  144 bits (363), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 9/192 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +SD  L  G+R+SE+R  +G +Q R A  +G T   +S IE  K+ P I TL K+ +   
Sbjct: 13  LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72

Query: 61  LSLSEFF-SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQ 115
             L+E   +E  +  +   ++   +   +     + G     + N   ++ +      + 
Sbjct: 73  TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVFP 132

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTI----NGQDYHLVAGQSYAINTGIPHSFSNTSA 171
                  R  H+GEE   V +G++  +       Q + L AG S   ++ IPH   +   
Sbjct: 133 NEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPHRGRSIKG 192

Query: 172 GICRIISAHTPT 183
               ++    P 
Sbjct: 193 ESKALVVIFRPP 204


>UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C30FD5
          Length = 205

 Score =  144 bits (363), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 25  RAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD 84
             A  +G++ S +S +E  +    I  L +L+  YG+S++E    P   D   V  ++  
Sbjct: 44  DVARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETR 103

Query: 85  LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTIN 144
            +    +G ++ L+ +G  +RT+  +     PG +  E   H GEE   VL G + L ++
Sbjct: 104 QLHSPEEGTTIYLLASGT-DRTMLPMLLELAPGASLAESGHHAGEEFVHVLAGRLRLEVD 162

Query: 145 G-QDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAHTPT 183
           G + + L AG S    +  PH F N S     R+I   +P 
Sbjct: 163 GAEPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSPP 203


>UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F2H2_ACIC5
          Length = 260

 Score =  143 bits (362), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 9/181 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+R+  +R ++ +        +GL+ S +S +E  +V P +  L ++  V+   LS F
Sbjct: 27  RIGERIKRLRLKKSMGLVELGRHTGLSASFLSQLETGRVVPTLRNLARIAMVFSKDLSYF 86

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVS-----MKLVHNGNPNRTLAMIFETYQP--GTT 119
           F    +P     V  + + + +   GV       + +    P+R L   +  + P    T
Sbjct: 87  FET--EPHTLFRVHKKKERVRLPQTGVDDPTYFFESLGYMVPDRMLDPYYAEFVPLKKGT 144

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 H G E   V+ GE+ +    + + L  G     +   PH++         ++  
Sbjct: 145 EVRAHVHPGFEFLYVISGELEIKHGEKLHVLEGGDGVYFDASTPHAYQCAGKTPAAVVIV 204

Query: 180 H 180
            
Sbjct: 205 T 205


>UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54
           Tax=Enterobacteriaceae RepID=YDCN_ECOLI
          Length = 178

 Score =  143 bits (362), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 9/177 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +        L ++RQQ+G S  R AE +G++ + +  IE+++ SP ++TL K+     
Sbjct: 1   MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S F S P+             + +   Q + +  +   +P             G  +
Sbjct: 61  VPFSTFISPPQSATPS--------VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                 +G  E   V++G++ L ++G+   L  G+       + H + N        
Sbjct: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169


>UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium
           RepID=B5ZXQ7_RHILW
          Length = 189

 Score =  143 bits (362), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 3/176 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+ ++R  +GL+    A  SG++ + IS IE+ + SP  S L ++    GLSLS F
Sbjct: 8   AIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAALGLSLSAF 67

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125
           F+E  +   P     +  +      G   + V        + ++   +  G         
Sbjct: 68  FAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGARVSFPPHA 127

Query: 126 --HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             H   +   + +GE+ +T     Y L  G    +  G  H F N      R    
Sbjct: 128 ASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARYCVV 183


>UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria
           RepID=Q4ZU57_PSEU2
          Length = 201

 Score =  143 bits (361), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G ++   RQ Q L     A ++G++   +S IE  +VS ++  L +L  V G+ +S+ F
Sbjct: 17  LGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLF 76

Query: 68  SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLV-HNGNPNRTLAMIFETYQPGTTTGE 122
           S+ ++     +++  D+ +E+      +G +  L+ H   P ++      T    +    
Sbjct: 77  SQYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFP 136

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
              H G E   +LEGE++     Q Y + AG S   +  IPH
Sbjct: 137 TFSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPH 178


>UniRef50_C9XPQ5 Putative transcriptional regulator (Putative uncharacterized
           protein) n=3 Tax=Clostridium difficile
           RepID=C9XPQ5_CLODC
          Length = 188

 Score =  143 bits (360), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+++  IR+ +  +    ++L+ L+ S IS IE+D + P++S+L+K+ +V    L  F 
Sbjct: 2   LGEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMFM 61

Query: 68  SEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHN----GNPNRTLAMIFETYQPGTTTG 121
            +    D   +VI ++D +  +     +  ++V            L + FE         
Sbjct: 62  DDNNTDD---LVIRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPSILFVEFELKPESEDAK 118

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAH 180
           + I H  EEI  V  G + + +  +   L  G S  I   +PH   N S   I R     
Sbjct: 119 DYIYHASEEIMVVTSGVVDICMGEKVVRLNPGDSTFIKANVPHKIINPSKDTIARGYGVI 178

Query: 181 TPTTF 185
           +P  +
Sbjct: 179 SPPIW 183


>UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales
           RepID=Q1LDV8_RALME
          Length = 203

 Score =  143 bits (360), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 5/182 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G  L  +RQ Q LS    +  +G++ S +S IE++  +P ++ L +L    G+SL++F
Sbjct: 20  AVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGVSLTDF 79

Query: 67  FSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            ++    P+ P    V  +    ++       ++++   +          + QPG     
Sbjct: 80  LAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPGGVLAS 139

Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
                G +E  +VL G + +   G +  L  G +      + H+  N    +   +    
Sbjct: 140 EPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATALLVVV 199

Query: 182 PT 183
             
Sbjct: 200 HP 201


>UniRef50_C0B5S6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0B5S6_9FIRM
          Length = 194

 Score =  143 bits (360), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 4/174 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+R+ E R+++ ++ R   E +GL+   +S +EQ+K SP + +L ++ +   + +    
Sbjct: 7   IGERIRECRKKKMMTIRVLGEYTGLSAGYLSMLEQNKTSPNVDSLARICEALDIDIQYAL 66

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126
            E E P +  +   +        + +++++   G        I  T +PG +   E  +H
Sbjct: 67  -EGEMPGKTVIHREEMSKHLYPEENMTVEVADFGQGESIFEYI--TIEPGESAKKEEYRH 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              E+  V++G + + + G+   L  G S  I +   HS SN     C  I  +
Sbjct: 124 VFSEMCMVIKGTLNVEVEGKICSLHPGDSVYIKSRERHSISNPGKEPCVSIWVY 177


>UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D5R2_PAESJ
          Length = 187

 Score =  143 bits (360), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 4/179 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKR+  IR++Q  +Q   +   G T S +S IE     PA++TL K+    G+ +S+
Sbjct: 1   MELGKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSD 60

Query: 66  FFSEPEKPDEPQVVIN---QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
                 K     +  +   + +      +G S     +G  ++ +       + G     
Sbjct: 61  LLEPSPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSH 120

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              H+G+E   VL G++   +   +Y + AG     N+   H     S    + ++  T
Sbjct: 121 VFSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNSLEEHLVIPVSEQ-VKYLAIFT 178


>UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
           RepID=D0CWR1_9RHOB
          Length = 331

 Score =  142 bits (359), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 2/159 (1%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           ++ +  + +SG++   +S +E+   +P + TL ++ +   +    F   P   D      
Sbjct: 145 MTLQDVSNVSGVSVGYLSQVERGNATPTLGTLTQIAQALEVDTDYFVRTPHTVD-SLTRG 203

Query: 81  NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIV 140
           +      +    +  + +        L        PG  + E + H GEEI  +LEG I 
Sbjct: 204 DSRPKFAVAGSSIEYEQIGVERAGHELTSYVMNVPPGYES-EVVTHVGEEIIYILEGTIS 262

Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +  ++Y +  G S       PH ++N +    RI+  
Sbjct: 263 QIVGEREYIMGPGDSLHYLGTTPHCWANKTDRPARILWV 301


>UniRef50_B8F9X8 Transcriptional regulator, XRE family n=2 Tax=Deltaproteobacteria
           RepID=B8F9X8_DESAA
          Length = 433

 Score =  142 bits (359), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 5/177 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+ ++R ++GLSQ + A++ G+T S IS +E + + P+I  L K+ ++  +S    
Sbjct: 253 DLGTRIKQLRVKKGLSQVQMAKMVGVTASTISQVENNSIYPSIPGLLKMAEILNVSPGYL 312

Query: 67  FSEP-EKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           FS   EK  +      Q   + + +    +G    L            + E     T +G
Sbjct: 313 FSSDFEKRSQIVFPSGQASAVTLANLSEYEGSVKMLTPLDFEGNAEPFMIEIEPEQTVSG 372

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
               H+G+E+G V  G + ++   + +   +G    +    P  + N   G  R+  
Sbjct: 373 HFFAHRGQEMGYVARGALEISFGDEIHKAKSGDLVYLQDQTPTRWYNPGPGAARLFW 429


>UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes
           RepID=D1YD37_PROAC
          Length = 258

 Score =  142 bits (359), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 2/178 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+ + R  +  +  + A  +G++   +  +EQ  V+P + TL +L    G+ L   
Sbjct: 75  AIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGVGLPAL 134

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
              P           Q   +  G  G    LV    P   + +   T  P          
Sbjct: 135 VEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHDSEAHS 194

Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAHTP 182
            G  E+  V EG + + ++G  Y L  G + +      H++ N++    R  ++   P
Sbjct: 195 DGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTVFEP 252


>UniRef50_C5ENH1 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5ENH1_9FIRM
          Length = 190

 Score =  142 bits (359), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 4/182 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  + E R+ + L+ +  +E +GL+   IS +E+++  P++S+L+K+ + + + +    
Sbjct: 2   LGTNIREYRKNKKLTIKELSERTGLSIGYISQVEREEAEPSLSSLRKIAREFDVPVYVLM 61

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN---GNPNRTLAMIFETYQPGTTTGE-R 123
            +        +   +     +    V  + +      N +    MI    +P +   E  
Sbjct: 62  DDHRNTHNLTIRREERLSARIKKSSVEYEFLTPLPSPNFSPKTLMIRAILEPCSRDTEIP 121

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           I H  EE   VL+G + +        L  G +  I   +PH+  N +A    ++S  TP 
Sbjct: 122 IVHHSEETLLVLKGTLTVVAGDVTIVLNEGDTTIIEEDLPHTCINDTADYVEVLSTITPP 181

Query: 184 TF 185
            +
Sbjct: 182 VW 183


>UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae
           RepID=A6UEQ1_SINMW
          Length = 209

 Score =  142 bits (359), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           +  + L ++RQ+ GL+    A    L  S +S IE  ++SP   T+  L +  G  ++E 
Sbjct: 19  SIAETLRQLRQENGLTLNELARRCALAPSTLSKIENGQMSPTYDTILSLAEGLGADVAEL 78

Query: 67  FSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GE 122
           F+  +       + +    D +   +     +++     ++    +    +  + +  G 
Sbjct: 79  FARRQTTTVSGRRTINRAGDGVAHNTDQYDYQMLCTELAHKQFVPLKAIIKANSISRFGG 138

Query: 123 RIKHQGEEIGTVLEGEIVL-TINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            + H GEE   VL GEI L T       L  G S   ++ + H+    S     ++   +
Sbjct: 139 MLSHSGEEFVYVLSGEIELHTQFYAPTRLHTGDSCYFDSTMGHALLKASEEDAEVLWVCS 198


>UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=Rhodobacterales
           RepID=Q1GGY8_SILST
          Length = 209

 Score =  142 bits (358), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 5/185 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           + E L  G R+ E+R+Q+  +   AA  +GL  S +S IE  ++SP    L+KL     +
Sbjct: 21  APEALDLGARVRELRKQRDWTLEHAASQAGLARSTLSKIENGQMSPTYDALKKLAVGLQI 80

Query: 62  SLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT- 118
           S+ + F+ P++   +   +V    +     +     +L+ +G   + +       +  + 
Sbjct: 81  SVPQLFTPPQRDQVNGRMIVTKFGEGSAHATATYEHELLADGLTRKNMLPYRARVRARSM 140

Query: 119 -TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                 ++H GEE   VL G + L     +   +  G S   +  + H+  + S+    I
Sbjct: 141 DEFDGWVRHDGEEFMYVLTGVVKLYTEFYEPVEMRRGDSAYYDGAMGHNVISVSSEDATI 200

Query: 177 ISAHT 181
           +   +
Sbjct: 201 LWVTS 205


>UniRef50_C3JHD6 Transcriptional regulator, XRE family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JHD6_RHOER
          Length = 211

 Score =  142 bits (358), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 17/191 (8%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL   RQ + L+    AE  G+T   +S +E+D V+ +++TL K+  V  + +   
Sbjct: 14  RIGARLKAARQSKRLTLDDLAEACGVTKGYLSKLERDHVNASVATLIKVCAVLEIPVGSL 73

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F      +   V  +    I  G + ++  L+   N  R + ++    +PG  +G     
Sbjct: 74  FENASAGE--VVRADAMPQISFGGEKMTEYLLTPTN-ERRIQVLLGELEPGGGSGREFYS 130

Query: 127 QGEE--IGTVLEGEIVLT------------INGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
              +     VLEG + ++            ++ +D  L AG S+       HSF    + 
Sbjct: 131 LPIDVNFVHVLEGGLRVSFEGGRTDPNGEAVDAEDVVLAAGDSFTFTPTHNHSFQAEGSV 190

Query: 173 ICRIISAHTPT 183
             +++    P 
Sbjct: 191 PAKVLWVLNPA 201


>UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LD32_RALME
          Length = 251

 Score =  142 bits (358), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 6/181 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             GKRL   R+  G +    AELSG++ + IS  E+ +++        + K   + + E 
Sbjct: 20  TFGKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEM 79

Query: 67  FS---EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           F+   E   P +  +V   +  +    Q ++ + +      + ++    T      TG  
Sbjct: 80  FAGAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPE 139

Query: 124 I--KHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           +   H GEE   VL GE+ +   NG+   L  G S   +  + H++ + S  + R I   
Sbjct: 140 VFASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVT 199

Query: 181 T 181
           T
Sbjct: 200 T 200


>UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2
           Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ
          Length = 182

 Score =  142 bits (358), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 2/179 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M         RL ++R  +G S ++ A++SG++ SA+S IE  +VSP   TL  +   + 
Sbjct: 1   MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118
           +++S+  +  E P +P V   +         G S ++V       +  +I  T +P    
Sbjct: 61  MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +     K   E    +LEG + +T+  + + L AG         P  F       C +I
Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLI 179


>UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria
           RepID=A0LGL4_SYNFM
          Length = 209

 Score =  142 bits (358), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 7/179 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+ + R+Q+ L+    A  +GL  + +  +E+  V P++  L K+ +  GL L  F 
Sbjct: 26  IGTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLGTFL 85

Query: 68  SEPEKPDEPQVVINQD----DLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121
            + E  D   V + +      +++   + V+++   +  G  +R +   +    P +   
Sbjct: 86  DDQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPESARD 145

Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           +++  H+GEE   VL GE+ +    + + L AG S   N+ +PH  S+  +    I + 
Sbjct: 146 KKLSAHEGEEFIVVLSGEVEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIYAV 204


>UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin sensor domain n=3
           Tax=Bacteria RepID=Q1IM53_ACIBL
          Length = 201

 Score =  141 bits (357), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 8/183 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G++L  +R ++ L      + +GL+ + +S +E+ K+ P + TL ++  V+ + L 
Sbjct: 18  PYRIGEKLRALRLKKKLGLVELGKHTGLSPALLSKLERGKLFPTLPTLLRIALVFSVGLD 77

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQG------VSMKLVHNGNPNRTLAMIFETYQP-G 117
            FF++ E       V+ +D+ +    +          + +        L      ++   
Sbjct: 78  YFFAD-ESRRHVVSVVRKDERLRFPERPNTRDVAYYFESLDFAALEPKLNAFLADFEHVP 136

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             T    +HQG E    L G++ L I G  Y L  G S   ++ +PH++ N     C  +
Sbjct: 137 AETLRLHQHQGFEFLHTLAGKLELVIGGIPYELSQGDSIYFDSSVPHTYRNAQKKPCSAL 196

Query: 178 SAH 180
              
Sbjct: 197 VVT 199


>UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH
          Length = 230

 Score =  141 bits (357), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 4/177 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      +RL  +R + G S   AA  +G++ + +  IE+ + SP ++TL K+   + 
Sbjct: 42  MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           +S S F  EP   ++ +V+    D I      +G+ +  +          +   T  PG 
Sbjct: 102 VSFSSFI-EPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGY 160

Query: 119 TTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                    G  E   V+ G + + + G+   L  G++       PH + N      
Sbjct: 161 QRESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPA 217


>UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica
           RepID=B5FUU1_SALDC
          Length = 185

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 9/177 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +        L  +R Q+G S  R AE+SG++ + +  IE+++ SP ++TL K+     
Sbjct: 8   MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S F S P+    P          +   Q + +  +   +P            PGT +
Sbjct: 68  VPFSMFISPPQAEFPPT--------FDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVS 119

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                  G  E   V++G + +   G    + AG+         H++ N+S      
Sbjct: 120 ESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHF 176


>UniRef50_A9WJF8 Helix-turn-helix domain protein n=3 Tax=Chloroflexus
           RepID=A9WJF8_CHLAA
          Length = 181

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G+++  +RQ++GL+ +  +E SGLT S +S +E+DKV+ +++ L+KL + + + ++ 
Sbjct: 1   MSLGQKIGRLRQERGLTLQEVSEGSGLTPSFLSRLERDKVNISVANLRKLAQFFSVQMTH 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF E E   +   V+   D + +      +++     PN  L        PG++      
Sbjct: 61  FF-EGEDDQQLGQVVRVADRVRLSLDDAPVQVFSLLPPNSDLDARLIEAYPGSSQQG-FS 118

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            +G ++  VL G +  T+  + Y L  G +        +S++NT   I  +++  T
Sbjct: 119 SRGSQMVHVLAGHVRYTLGEEQYDLAPGDTLFFRDDTAYSWTNTGHSIATMLTVST 174


>UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Burkholderia
           RepID=Q13RR3_BURXL
          Length = 276

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 12/189 (6%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+R+   RQ Q L+   A+ L G++ S +S +E   +SP    LQK++    + + E 
Sbjct: 79  DLGRRVRAARQAQDLTLETASRLCGVSRSTLSKVENGLMSPTFDVLQKIVLGLKIEIGEL 138

Query: 67  FSEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--TTGE 122
           F    K      + +  +++      +G  M+L+     ++ +          T     +
Sbjct: 139 FGSTPKVSASGRRALTRKNEGQRHAYRGYQMELLATDLAHKAMLPFRIRISAHTLDAFDD 198

Query: 123 RIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-- 179
             +H+GEE   V+ G + L        HL AG S   ++   H+  +TS     ++    
Sbjct: 199 WGRHEGEEFLYVISGSVCLYSELYAPTHLNAGDSLYFDSRTGHAAVSTSEEDAEVLWMAT 258

Query: 180 -----HTPT 183
                HTP 
Sbjct: 259 SADIPHTPP 267


>UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria
           RepID=Q3SUW3_NITWN
          Length = 259

 Score =  141 bits (355), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 2/181 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  +  GK L  IR +QGLS  R A+ SG++ + +  IE  K +P I  L K+     + 
Sbjct: 73  ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTG 121
            +   +  +      +  +   L+       + + +   +  R          P      
Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192

Query: 122 ERIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           E       E   V +G + + +   +   L  G +      +PH++ N       +    
Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252

Query: 181 T 181
           T
Sbjct: 253 T 253


>UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium
           vanbaalenii PYR-1 RepID=A1T298_MYCVP
          Length = 180

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 6/168 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +RQ++G++    A  +GLT S +S +E+ +  P+I+   K+ +   + +++ FS+  
Sbjct: 5   LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131
           +     V     +        V+ +++      + ++          TT     H G+E 
Sbjct: 65  EVSTISV-DRAAERGADRHHAVAARML-----GKEMSPFVVRPGRTFTTHPHPTHLGQEF 118

Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             V  G + L+ +G+   L AG     +   PH           ++  
Sbjct: 119 IFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166


>UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N4U4_9BACT
          Length = 193

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 6/182 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++ +A G R+   R+++ ++ +  A+ +GLT   +S IE  +  P++  L  +     
Sbjct: 1   MREQLIALGTRIKMARKERKMTLQTLADRTGLTAGLLSKIENFRTIPSLPVLVDIAAALE 60

Query: 61  LSLSEFFSEPEKPDEPQ-VVINQDDL----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
             L+EFF +     + + +++  ++      E G       +         + M++ T  
Sbjct: 61  TDLAEFFRDMTLGSKARWLLVRPEEQKTVEREEGRHLHYRMIFETSLSAVNMQMMYVTIP 120

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
            G+  GE +  +G+E+  +L+G     +  +   L  G +   +  +PH   N S     
Sbjct: 121 CGSG-GEPVSTEGDELLYILDGRFRYRLGDEVVELTPGDALYFDGTLPHVPENDSGAPGT 179

Query: 176 II 177
           +I
Sbjct: 180 LI 181


>UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=Desulfovibrionales
           RepID=B8J4U1_DESDA
          Length = 189

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 7/180 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+   R+++ +     A+ +GL    +  +E D + P+I  LQK+ +  G+ L  F
Sbjct: 6   TIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTF 65

Query: 67  FSEPEKPDEPQVVIN----QDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
             +    D     I+     ++ +    +     + + +  G  +R +        P + 
Sbjct: 66  LDDQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSG 125

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +   HQGEE   VL+GE+++    +++ L  G++   N+ +PH           I++ 
Sbjct: 126 ERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPHYVGAAGDEPVEILAV 185


>UniRef50_C0YU86 XRE family transcriptional regulator n=2 Tax=Flavobacteriaceae
           RepID=C0YU86_9FLAO
          Length = 189

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 7/184 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D  +  GKRL +IR++  L+    A  + +++  +S IE  +  P++  L  L++   
Sbjct: 1   MNDFLIGIGKRLKDIRKKNNLTINELAFKANVSNGLVSRIENGRTIPSLPVLLDLIQSLE 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDL-----IEMGSQGVSMKLVHNGNPNRT-LAMIFETY 114
           +  S FF   EK    + +    +       E+ ++G     + + + +      +  T 
Sbjct: 61  IDASYFFEGVEKKSNAKFIYVPKESQQVIEKEVEAEGFRYMHIFSKSLHSLGFEAVLLTL 120

Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           +P +   + I     E   +L+GE+   I+ ++  L  G S   N   PH   + S   C
Sbjct: 121 EPNSKREKVIT-DAWEFKYILKGEVKYVIDNEEVSLKEGDSLYFNGKFPHVPVSISNESC 179

Query: 175 RIIS 178
            ++ 
Sbjct: 180 VMLV 183


>UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria
           RepID=Q7MEH5_VIBVY
          Length = 232

 Score =  140 bits (353), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 5/182 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E L  G+R+ E+R + G++   A++ +GL  S +S IE +++SP    +QKL     + +
Sbjct: 49  EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108

Query: 64  SEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119
            + F  P K      + +          +Q    +L+     N+ +          T   
Sbjct: 109 PQLFEPPRKKVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHARTFEE 168

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G+ ++H GEE   +L G +       +   L  G S   +  + H   + S     I+ 
Sbjct: 169 YGDWVRHDGEEFLLILSGAVQFYSEFYEPVVLSEGDSVYYDANMGHMLVSVSEEDAHILW 228

Query: 179 AH 180
             
Sbjct: 229 VT 230


>UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii
           DSM 10542 RepID=D1BGL3_SANKS
          Length = 204

 Score =  140 bits (353), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D     G  +   R+Q  LS +  A+ +G++   +S +E+   +P++ ++Q+L    G+
Sbjct: 17  ADTVAMLGATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGV 76

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
           S++    EP   +   V   +  ++ +       G +++ + +      + +I  T  P 
Sbjct: 77  SVTRLL-EPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPA 135

Query: 118 TTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
            T  ER  +H G E  TVL G + +T   ++  L AG +       PH ++N   G   +
Sbjct: 136 FTNVERPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVV 195

Query: 177 ISAHTP 182
           + A  P
Sbjct: 196 LGAVAP 201


>UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA
          Length = 207

 Score =  140 bits (353), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 1/172 (0%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           + L  IR  +G S  + A   G++ + +S IEQ K  P IS L K+     +  SE   E
Sbjct: 29  ENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKE 88

Query: 70  PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG- 128
             +     +      ++   S+  + + +     NR         +PG          G 
Sbjct: 89  KNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGT 148

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E   V+ G++ L +  +   L    S      + H +SN +     +    
Sbjct: 149 TENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200


>UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri
           RepID=A5N143_CLOK5
          Length = 184

 Score =  140 bits (353), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D     G  L  IR+++ L+    ++L+ ++ S +  IE+   +P I+ L K+     
Sbjct: 1   MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  ++  +E + P    VV N D    +   G  +  + N +P + + + ++  + G++ 
Sbjct: 61  IPFTDLINEEKPP--ISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSY 118

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
             +    G EE   +  G + L I  ++Y L  G S      I H + N      R 
Sbjct: 119 ESKGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRA 175


>UniRef50_A9DT77 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT77_9RHOB
          Length = 198

 Score =  140 bits (353), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 4/169 (2%)

Query: 20  GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS-EPEKPDEPQV 78
            +S +  A  + ++   IS +E+    P++ TL  +     + +S  F     +P +  V
Sbjct: 31  NMSLKDIAAKAQVSVGLISQVERGISMPSVKTLSAICNALEMPVSWLFDGGGRQPGQVVV 90

Query: 79  VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KHQGEEIGTVLE 136
             +Q   +++GS+G+  +L+   +    + M+    +PG ++GE+      G + GTV+ 
Sbjct: 91  RRHQRRFLDLGSKGMIKELMTP-DSCSGIQMMRLVIRPGGSSGEKPYNHGSGAKCGTVVS 149

Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           G + L +NG  + + AG S+A +      F         +     P  +
Sbjct: 150 GLLALEVNGVVHKVEAGDSFAFDATEHIRFWALGDVEADLFWVVAPAVY 198


>UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3
          Length = 220

 Score =  139 bits (352), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+RL  +RQ + L+   A++L+G+  +  S IE +K+SP    L ++++  G    +  
Sbjct: 31  IGQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDVL 90

Query: 68  SEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERI 124
           +   +      V + +D++   + +      L+H  +    + +  +         G   
Sbjct: 91  TNQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHRDSSAGMITLRMQVDARTVDEAGGLA 150

Query: 125 KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            H+G+E   VL GE+ L    G+   L AG+S   ++  PH++   S     ++   TP 
Sbjct: 151 GHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLTPP 210


>UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=C4WPS4_9RHIZ
          Length = 211

 Score =  139 bits (352), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 13/194 (6%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D   + G  L +IR +   +    + ++GL  S +S +E +++      L +L +  G
Sbjct: 1   MNDAKSSLGDILRDIRSRNHWTLAEVSAMTGLAVSTLSKVENNQMQLTYDRLIQLAQGIG 60

Query: 61  LSLSEFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114
           + ++E F     PDE       +      D   + +Q      +      + +  I    
Sbjct: 61  VDIAELFGAVATPDELSNVMGRRTFTKSGDGRSIITQNYDYLYICTEIYKKAMVPILAVA 120

Query: 115 QPGT--TTGERIKHQGEEIGTVLEGEIVLTINGQDY---HLVAGQSYAINTGIPHSFSNT 169
              T    G  I+H+GEE   VLEGE+ L    + Y    L  G S   +    H + + 
Sbjct: 121 HARTLEEFGPLIRHKGEEFIYVLEGELELH--SEIYAPLRLKKGDSAYFDAMTGHGYLSV 178

Query: 170 SAGICRIISAHTPT 183
           S    +I+   +  
Sbjct: 179 SEEPAQILCVCSTP 192


>UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis
           RepID=C0X8B7_ENTFA
          Length = 183

 Score =  139 bits (351), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 69/183 (37%), Gaps = 9/183 (4%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +     G  L +IRQ++ L+    A ++G++   +S IE+   +P I+T+ K+     + 
Sbjct: 2   EINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVP 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            +    +    + P V   +            +   ++ N  R   +          +G+
Sbjct: 62  YTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFEL----DSGK 117

Query: 123 RIKHQGE-----EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           + +  G      E   V++G + L +  Q Y L    +   +    H++ N      + +
Sbjct: 118 KYQAVGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAV 177

Query: 178 SAH 180
             +
Sbjct: 178 VIN 180


>UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1
           Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT
          Length = 248

 Score =  139 bits (351), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 1/175 (0%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+ L  +R  +GLS  R A+LSG++ + +  IE  + +P I+ L K+ +   +  S F 
Sbjct: 68  VGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDVPFSAFV 127

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           + P       +  ++   +       S + +   +  R +          +         
Sbjct: 128 AAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQSHPHPA 187

Query: 128 GE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           G  E  TV  G + +    + + L  G +      I H++ N            T
Sbjct: 188 GTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVMT 242


>UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus
           RepID=A0RIX6_BACAH
          Length = 237

 Score =  139 bits (350), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 5/173 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G  + EIRQ++G++  +  E +GL+   +S +E +K SP+ISTL+ +     + L  
Sbjct: 57  MNIGSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLETISNFLNVPLPY 116

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124
                E+ D  +VV   +    +   G   + + +      L +       G        
Sbjct: 117 LLL--EQKDRLKVVKKVERKYSV--YGKDEQRIEHVAEQGGLRLNLVEIPAGFPKENTPN 172

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            H+GEE   VL G++ +        +  G S++ N  +PH   N       ++
Sbjct: 173 AHEGEECHLVLRGKLEVQHGEDVAIVEEGDSFSWNACVPHIVRNIGEETALLL 225


>UniRef50_A9DXP7 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Oceanibulbus indolifex HEL-45 RepID=A9DXP7_9RHOB
          Length = 196

 Score =  139 bits (350), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 2/168 (1%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           + + R +  L+ ++  E SG++   +S +E+   +P++ TL ++     + +  F   P+
Sbjct: 1   MRKQRHRLSLTLQQLGEASGVSVGYLSQVERGLATPSLGTLSQIAVALQVEVGFFIHTPK 60

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131
             D      ++     +    +  + +    P   L+       PG  + E +    E +
Sbjct: 61  TQD-SLTRADERQRFAVSGSSIEYEKLGADFPGHELSSYIMNVPPGYASEEVVHEGEE-V 118

Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +LEGEI   ++G ++ +  G S       PHS+SN +    R++  
Sbjct: 119 IYILEGEIAQVVDGGEHIMRPGDSLHYLGSSPHSWSNKTDKPARMLWV 166


>UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5VF82_SPHWW
          Length = 252

 Score =  139 bits (350), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 13/184 (7%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
           PG  L   R  +GLS R  A  +GL  S +S +E  K+      L  L +  G+ + + F
Sbjct: 39  PGPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLF 98

Query: 68  SE--PEKPDEPQV----VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S   P++P    V    +I   +  E  S+      +     ++ +  +    +    T 
Sbjct: 99  STAAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVE--ARTL 156

Query: 122 ERI----KHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           E      +H+GEE   VL G + L  +      L  G S   ++G+ H++   S G CR+
Sbjct: 157 EEYRGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRL 216

Query: 177 ISAH 180
           +S  
Sbjct: 217 LSIC 220


>UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1BBN6_PARDP
          Length = 211

 Score =  139 bits (350), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 6/181 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G RL  +R+ Q L+ +  A L+G++ SA+S IE++ +SP ++TLQ++     + LS
Sbjct: 25  PLELGPRLKALRKGQQLTLQEVARLTGVSTSALSKIERNDLSPTLTTLQRIASGLQVELS 84

Query: 65  EFFSEPEKPDE---PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--T 119
               +          + +        + +   + KL+     ++    I    +  +   
Sbjct: 85  ALLGDEPGHAPTTGRRSIARAGQGDNLNNATCNNKLLCADLKDKCFTPIRTVVKARSPED 144

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                   GE   TVL+GE+V+     +   L  G S   +    H +++       +I 
Sbjct: 145 YEAWGVSDGEIFLTVLKGELVIHSRIYEPLVLYPGDSMYYDASTEHCWTSQGDVDAELIW 204

Query: 179 A 179
            
Sbjct: 205 V 205


>UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11I99_MESSB
          Length = 198

 Score =  138 bits (349), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 5/181 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
               +  +R+ +GL+    A   G +   +S +E+    P+++ L+ L   + + +S F 
Sbjct: 20  LASDIRRLRKARGLTLAGLASQLGRSVGWLSQVERGISLPSVADLRALANHFKVPVSFFL 79

Query: 68  SE---PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           +     EK  +  V  ++   +  G   V  +L+      R   +I   +   T   +  
Sbjct: 80  TPAASDEKELQVVVRADKRRKLVSGQPRVLEELLSPNLGGR-FEIICCEFAGNTPLPQPR 138

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           K   EE G V+ G + + + G+ Y L AG S+ +       + N       ++   +P  
Sbjct: 139 KRAAEEAGYVVSGALDIEVTGKWYELSAGDSFRVRGETL-RWRNPHEEPAIVVWVVSPPV 197

Query: 185 F 185
           +
Sbjct: 198 Y 198


>UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Bacteria RepID=Q31LK1_SYNE7
          Length = 230

 Score =  138 bits (349), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  + E+RQ+  L+    ++ +G++   +S IE  + S ++ TL++L+ V G+SLS  F
Sbjct: 25  LGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALF 84

Query: 68  SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGE 122
              E   E   ++ +    E+       G + +L+ +    +        T    +    
Sbjct: 85  KGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERSEPFA 144

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
             +H G E   VLEG++      Q Y L AG +    + IPH
Sbjct: 145 AFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPH 186


>UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium
           denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ
          Length = 213

 Score =  138 bits (349), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   +  G+ L  +R++ GLS  + A  SG++ + +  IE  K +P I+ L ++ +   +
Sbjct: 20  TKLSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQV 79

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S+    S P       V  ++  ++   + G + + +      +++ +   T     +  
Sbjct: 80  SVPSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSED 139

Query: 122 ERIKHQG-EEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 G ++   VL GEI LTI       L  G S   N   PH+  N      +    
Sbjct: 140 VAAFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLV 199

Query: 180 HTP 182
             P
Sbjct: 200 VAP 202


>UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sphingobacterium
           spiritivorum RepID=C5PR45_9SPHI
          Length = 205

 Score =  138 bits (348), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 77/187 (41%), Gaps = 8/187 (4%)

Query: 1   MSDEGL-APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59
           M D  +     R+ EIR+ +G++ +  A+ +G++   IS +E ++  P++  L  ++   
Sbjct: 13  MKDNTIFKISSRIKEIRKGKGITIQDLADRAGVSKGLISQVENNRTVPSLLVLINIIGAL 72

Query: 60  GLSLSEFF--SEPEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFET 113
            + L+EFF     +    P +V  ++       +     +  ++      N T+ ++   
Sbjct: 73  EIDLTEFFKGFTSDGDLGPVIVRRKEQYESFEKEHALGFMYKRIFTTSIVNSTMDIVLLE 132

Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
            +P       +  +  E   +L GE+      +  HL  G S   +  + HS  N+    
Sbjct: 133 LEPDANR-PMVTTEAFEYKYILAGEVEYIFENEVVHLKEGDSILFDGRLSHSPRNSGTQK 191

Query: 174 CRIISAH 180
             ++  +
Sbjct: 192 ASMLIVY 198


>UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM
          Length = 183

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 6/173 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              + L  +R ++ LS  + AELS ++   +S IE+   +P I+TL K+     +  +  
Sbjct: 6   IIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVPYTLL 65

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTGERI 124
               E+ +    +I + +L    S+    +    +   P R   +       G +     
Sbjct: 66  L---EQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRNFELFQIELDEGCSYRSVG 122

Query: 125 KH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
              + EE   VLEGE+ L +N + Y L    S + +    H +SN   G  + 
Sbjct: 123 HSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKA 175


>UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=Firmicutes
           RepID=A9VF72_BACWK
          Length = 197

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 3/179 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+ +   R++  ++ R  A+ +G++ S IS IE+   +P+++ L+ + K   + L   
Sbjct: 16  RLGQTVLSYRKKNNMTIREFADYAGISTSLISQIERGHANPSLNVLELIAKALNVPLFTL 75

Query: 67  F-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERI 124
           F ++ +         ++  +    +  +   ++        + M+         TT    
Sbjct: 76  FINDIDTDSLISKKKDRKKVYRENNDHIVYDVLTPDFMKARIEMLMMDLNGYANTTESHY 135

Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            H+  EEI  V++GE+ + + G +Y L  G    I   + H F N S  +  I+   TP
Sbjct: 136 SHEDKEEIAVVMKGEVYVELEGNEYFLEEGDVVRIPPNVKHRFLNKSDEMNHILFVLTP 194


>UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp.
           MC-1 RepID=A0L5V7_MAGSM
          Length = 183

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G R+ ++R Q+ L+Q+  A+++ +  + ++T+E+D  +P+++ + K+ +  GLS+ +   
Sbjct: 7   GMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLV 66

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             E+     V  +Q   +E         +V  GN       IF + Q G     R    G
Sbjct: 67  T-ERERIQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIF-SLQAGAVYEGRPHPPG 124

Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            EE   VLEG + L + G+   LV G S      + H + N +    R +   
Sbjct: 125 SEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCLVTI 177


>UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria
           RepID=A6UEP3_SINMW
          Length = 234

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 8/186 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +A G  +   R++ G++    A  + ++   +S IE    SP+++TLQ L +  G+ ++
Sbjct: 44  EVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPIT 103

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT---LAMIFETYQPG 117
            FF   E+ +   V +   + +++  +    G    L+ +   N +   +     T    
Sbjct: 104 AFFRRFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +      +H G E   +LEGE+V       Y +  G S   +   PH     +    R +
Sbjct: 163 SDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRYL 222

Query: 178 SAHTPT 183
           S  +  
Sbjct: 223 SIISYP 228


>UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria
           RepID=C3MCD7_RHISN
          Length = 244

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 8/187 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +A G  +   R++ G++    A  + ++   +S IE    SP+++TLQ L +  G+ ++
Sbjct: 54  EVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPIT 113

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT---LAMIFETYQPG 117
            FF   E+ +   V +   + +++  +    G    L+ +   N     +     T    
Sbjct: 114 SFFRGFEE-EHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +      +H G E   +LEGE+V       Y +  G S   +   PH     +    R +
Sbjct: 173 SDVFPTFQHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRYL 232

Query: 178 SAHTPTT 184
           S  +  +
Sbjct: 233 SIISYPS 239


>UniRef50_C0ZNA0 Putative Xre family DNA-binding protein n=1 Tax=Rhodococcus
           erythropolis PR4 RepID=C0ZNA0_RHOE4
          Length = 187

 Score =  137 bits (345), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 8/182 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
           G + GK +   R +QG+  R  A   G++ S +S  E  +   A++TL  +     LSL 
Sbjct: 2   GTSVGKTVRAERTRQGIPVRELARRLGVSPSFLSQFELGQSQAAVNTLFAIATELNLSLD 61

Query: 65  EFFS---EPEKPDEPQVVINQDDLIE--MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
                  +PE+  E +   ++  + +      GV  + + N   N  +  +   Y+PG  
Sbjct: 62  VLLGNSVDPERESESESKTHEPRISDCLTFRSGVRWQRLANTPENHHVQFLLTEYEPGAD 121

Query: 120 TGE---RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           +        H G++ G VLEG + + I+G    L +G++  +   +PH   N +    + 
Sbjct: 122 SAPGDAPQTHSGDDYGYVLEGTLTIDIDGMRRLLKSGEAIHLVGNVPHRLRNETDQTVKA 181

Query: 177 IS 178
           I 
Sbjct: 182 IW 183


>UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax=Rhizobiales
           RepID=A8I3G0_AZOC5
          Length = 217

 Score =  136 bits (344), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 11/185 (5%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+ L   RQ + L+ ++ AE +GL+ S +S +E  ++S     L +L    G++++E F
Sbjct: 15  LGECLKAARQARKLTLKQVAERTGLSLSTLSKVENHQMSLTYDKLLQLTNGLGIAIAELF 74

Query: 68  --------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-- 117
                   + P+     + +    D   + ++  S         ++ +  I    +    
Sbjct: 75  HSAADRAPTAPQMVTARRSISRAKDGDVIDTRTYSYAYKCTDLMSKAMVPITGELRARTL 134

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
              G  I+H GEE   V  G + +         L  G S  I++ + H++ N      RI
Sbjct: 135 AEFGPLIRHPGEEYVYVTAGRVEVHTEYYAPEILETGDSLYIDSSMGHAYLNAGEDPARI 194

Query: 177 ISAHT 181
           +   T
Sbjct: 195 VCVCT 199


>UniRef50_Q0F379 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F379_9PROT
          Length = 180

 Score =  136 bits (344), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +  +R+QQGLSQR  AE +G++ +A+S +E  + SP+++TL+KL    G++++ F
Sbjct: 3   NIGGTIRSLREQQGLSQRALAEAAGISAAALSQLEAGQTSPSVATLEKLADGLGIAIAAF 62

Query: 67  FSEPEKPDEPQVV-INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-- 123
           F +   P + ++  +N+   + +G  G  + L     P      +     PG    E   
Sbjct: 63  FLDSGNPADIEIFDLNERPSVPLGQGGRFVPLTAMHQPA-GFEPMLVQLDPGGCFDENKY 121

Query: 124 -IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            IK        + +G  VL  + + Y L   QS   +   PH++ N S   C I+   +
Sbjct: 122 GIKSP-HAFVWMRKGRAVLEYDERSYELCEMQSVYYDARKPHNWRNISDTRCEILMVRS 179


>UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales
           RepID=Q1GDQ0_SILST
          Length = 187

 Score =  136 bits (343), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDE +     L EIR   GLS  RAAEL+G++ + +  IE+ + SP I+TL K+ K + 
Sbjct: 1   MSDESITL--NLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           L L+    E  +P        +          +++K+V   +P+        + +PG + 
Sbjct: 59  LPLTALIEESTRPSG---RSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSH 115

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                  G  E   VLEG + +  +G    L  GQ    +   PH + + S G  
Sbjct: 116 ESLPHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170


>UniRef50_A6W7Y3 Transcriptional regulator, XRE family n=6 Tax=Actinobacteria
           (class) RepID=A6W7Y3_KINRD
          Length = 232

 Score =  136 bits (343), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 11/184 (5%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R  Q  +    AE SGLT   +S +E+D+ + +++ L +L     L++   F
Sbjct: 43  IGSRLRAARLAQRRTVAEVAEASGLTKGFLSRLERDRATASVAALVRLCATLDLAVGSLF 102

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIKH 126
                P    V       I  G  G+   L+      R +A+I     PG  +G E    
Sbjct: 103 EP--APAGEVVRAGHYPPITFGGHGLRESLLTPA-GERRVAVIVSDLDPGGGSGAEPYAL 159

Query: 127 QGE-EIGTVLEGEIVLTING------QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             + E   VL GE+ L   G      +   L AG +   +    HSF  T     R++  
Sbjct: 160 DADVEFALVLAGEVELRFAGPAGSPAEAVVLRAGDALTFDPARAHSFRGTGETPARVLWV 219

Query: 180 HTPT 183
            +P 
Sbjct: 220 VSPA 223


>UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT
          Length = 199

 Score =  136 bits (343), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 76/179 (42%), Gaps = 2/179 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D   + GK +   RQ  GLS    A+ SG++ + +S +E+ + +P +    ++ +  G
Sbjct: 1   MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
            SL++   +    +   V  +Q   +      V    + +   +R L + +     G ++
Sbjct: 61  CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120

Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           GE   +     E+ TV+EG + + + G+ + L  G S          + N      +I+
Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQIL 179


>UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae
           RepID=B8FLW0_DESAA
          Length = 184

 Score =  136 bits (343), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 6/180 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            ++ G+R+ ++R+ + +     A  +GL    +  IE  +  P++ +L ++ +   +  S
Sbjct: 9   NISTGQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVD-S 67

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GER 123
            FF E E     + +          +   +   +  G  ++ +        P     G  
Sbjct: 68  AFFLEKEVKTTKKGLAKA---YSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVS 124

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH-TP 182
            +H+GEE   VL G++ +T+      L  G S   N+G+ H   N       ++    TP
Sbjct: 125 YQHEGEEFVYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184


>UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria
           RepID=A1AL86_PELPD
          Length = 192

 Score =  136 bits (343), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D     G +++ IR+  GL++ + AE    + + I+ +EQ +++P+++ L K+ +  G
Sbjct: 1   MTDRN-RIGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM--------GSQGVSMKLVHNGNPNRTLAMIFE 112
           + L     +            +++ I           +  +    +      R +     
Sbjct: 60  VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119

Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
             +P    G  +  H+GEE   +L+G + +      Y L  G S   ++ +PH   +  +
Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179

Query: 172 GICRIISAHTPT 183
              RI++     
Sbjct: 180 DSARILAVVYAP 191


>UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cellular organisms
           RepID=A5UJ53_METS3
          Length = 193

 Score =  136 bits (342), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+++  + + + +S    A  S +    +  I   ++ P+++ L K+ +V G+ +  F 
Sbjct: 7   IGEKIKTLMEVRNVSLDELANDSDVNIELVEKILNGEIIPSLTPLTKIARVLGVRIGTFI 66

Query: 68  SEPEKPDEPQVVINQDDLI--------EMGSQGVSMKLVHNGNPNRTLAMIFETYQ-PGT 118
            + E+     V   + D +        +  +  +    +  G  +R +      ++    
Sbjct: 67  DDDEQTGPLVVRKGKSDKVVYFSGDENKTENSNLEFYSLAAGKSDRNMEPFIIDFKVDAE 126

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            + E   H+GEE   VLEG I +     +Y L  G S   ++ + H   +++    +I++
Sbjct: 127 ESHELSSHEGEEFLYVLEGTIEVIYGQNNYVLETGDSIYYDSIVSHHVHSSNDETAKILA 186

Query: 179 AH-TP 182
              TP
Sbjct: 187 VIYTP 191


>UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1AZ95_PARDP
          Length = 204

 Score =  136 bits (342), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 5/177 (2%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS- 68
           +RL  +R+++G S  RAAE  G+  S +S IE  K+SP +  L K+++ + +  ++ FS 
Sbjct: 16  ERLRALRERKGWSLNRAAEEVGVPPSTLSRIENRKMSPTLDLLLKIVRTFDMHPNDVFSG 75

Query: 69  -EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GERIK 125
              ++  +   V    D   +    +  K +H          I  T    +    G    
Sbjct: 76  RPDQQEKQEISVSRASDPALIELPNLFYKHLHPDMECFNFRAILITLFARSVEEYGGLTA 135

Query: 126 HQGEEIGTVLEGEIVLTINGQD-YHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           H G+E   +L G++ + + G     L  G S    + IPH++ +      +++ A +
Sbjct: 136 HSGQEFVYLLSGKLQVHLEGHPLVTLAPGDSIMFTSSIPHAYVSAGDSQAKLLIASS 192


>UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales
           RepID=C8X7U0_NAKMY
          Length = 197

 Score =  136 bits (342), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 8/172 (4%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL  +R Q+GL+    +  +G++ S +S +E  +  P +  L  L   Y + L +  
Sbjct: 19  VGPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDDLV 78

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           + PE+ D P++ +    +           ++     +  +            T E   H 
Sbjct: 79  AAPEEGD-PRLRLKPGRVK-------GRTVIPLTRQSDGMQAWKIIIPTSNVTPETRSHD 130

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G+E   VL G +   +  QD  L  G   A +T +PH F +T      I+S 
Sbjct: 131 GDEWIYVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILSI 182


>UniRef50_UPI0001B57C0C XRE family transcriptional regulator n=1 Tax=Streptomyces sp. C
           RepID=UPI0001B57C0C
          Length = 213

 Score =  135 bits (341), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 3/185 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           + E +  G+ + E R  + +S    A  SGL+   +S +E+   +P++S++ ++ +   +
Sbjct: 29  TPEAIEVGRAIRECRTARRVSMAVLAARSGLSQPFLSQLERGLATPSLSSIYRIAEALDV 88

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           +   F   P +P       +   +    + G   +++  G  +  +      ++PG    
Sbjct: 89  APGTFLRPPGRPGVVSHESDPQVIRVSEAAGQVARVLIPGGRSALMEAYEHHFEPGQGER 148

Query: 122 ERIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHS--FSNTSAGICRIIS 178
              +H GE+   VLEG +VL +   +   L AGQS      +PH    ++      R + 
Sbjct: 149 GWFEHPGEDFLYVLEGSVVLEVRGEEPLLLTAGQSAHHRGDLPHRCVLADGGTAAARTLL 208

Query: 179 AHTPT 183
                
Sbjct: 209 VIASP 213


>UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burnetii
           RepID=B6J765_COXB1
          Length = 183

 Score =  135 bits (341), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 6/179 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
             +RL  +RQ++ +S +  A+ +G++ S I  IE  +V P +    KL    G +LSE  
Sbjct: 4   FAERLKRLRQERQMSMQALADAAGVSKSMICKIESTEVQPTLDVAGKLAVALGKTLSEML 63

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE---RI 124
             P+ P   Q+   ++  I + +Q +  + +        +  +F  + PG +  +     
Sbjct: 64  HSPQTPSVIQLT-TEEQAIWIDAQNIKRRNISPILEGSKVEWLFVEFPPGASLTKPLTPY 122

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR--IISAHT 181
             + E+   + +G + + IN   Y L  G S   +        N S  +    ++   T
Sbjct: 123 TPETEKYILITKGVLEVKINKTIYSLKKGDSLYYDGKCASELLNPSRKVTEYYVLIVRT 181


>UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5
           RepID=B6JDE1_OLICO
          Length = 208

 Score =  135 bits (340), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 10/186 (5%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G+R+ ++R+ Q  +    A   GLT   +S +E  + +P + TL KL K  G  L+  
Sbjct: 19  SLGRRIRQLRKMQERTLDSLATEIGLTKGYLSKVETGRQTPPLGTLSKLAKALGTDLAGL 78

Query: 67  FSEP-----EKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
                    E+  E   V+  D+   +     S G   + +      + +     T+   
Sbjct: 79  VEHGPVEPAEQDFEGVSVVRADERRNVVRGATSFGYDYQSLVQNATGKHMTPFLFTFPSQ 138

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                  +H GEE+  VL G +   +  + Y L+ G     +    H       G  + +
Sbjct: 139 ILKEVFFEHGGEEMIFVLSGVVEFEVGNETYELMPGDCIYFDPRQRHRGRGKY-GEAKAL 197

Query: 178 SAHTPT 183
                 
Sbjct: 198 VVLYEP 203


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C...   198   9e-50
UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin...   196   2e-49
UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q...   195   4e-49
UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni...   194   2e-48
UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl...   192   4e-48
UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M...   192   6e-48
UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl...   191   7e-48
UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo...   189   3e-47
UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De...   189   3e-47
UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7...   189   4e-47
UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost...   189   5e-47
UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni...   188   1e-46
UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=...   186   2e-46
UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti...   186   3e-46
UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67 Tax...   185   5e-46
UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax...   185   5e-46
UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th...   185   6e-46
UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin...   184   1e-45
UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax...   183   2e-45
UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re...   183   3e-45
UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=...   183   3e-45
UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ...   181   9e-45
UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B...   181   1e-44
UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea...   181   1e-44
UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi...   180   1e-44
UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F...   179   3e-44
UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P...   179   5e-44
UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid...   178   7e-44
UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7...   178   8e-44
UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B...   177   2e-43
UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil...   177   2e-43
UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga...   177   2e-43
UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi...   176   2e-43
UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D...   176   2e-43
UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro...   176   3e-43
UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=...   176   3e-43
UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax...   176   3e-43
UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob...   176   4e-43
UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin...   175   7e-43
UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh...   174   9e-43
UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu...   174   1e-42
UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo...   174   1e-42
UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte...   174   1e-42
UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ...   174   2e-42
UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum...   174   2e-42
UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill...   173   2e-42
UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C...   173   2e-42
UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin...   173   3e-42
UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin...   173   3e-42
UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI...   173   3e-42
UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De...   173   3e-42
UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1...   173   3e-42
UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin...   173   3e-42
UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do...   172   5e-42
UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD    172   5e-42
UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin...   171   9e-42
UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu...   171   1e-41
UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be...   171   1e-41
UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill...   171   1e-41
UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar...   170   2e-41
UniRef50_A5V718 Transcriptional regulator, XRE family with cupin...   170   2e-41
UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi...   170   2e-41
UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh...   170   2e-41
UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr...   170   2e-41
UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De...   169   3e-41
UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh...   169   4e-41
UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci...   169   4e-41
UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin...   169   4e-41
UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0...   168   8e-41
UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin...   168   8e-41
UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch...   168   1e-40
UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin...   168   1e-40
UniRef50_D2BA96 Putative transcriptional regulator, XRE family n...   167   2e-40
UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin...   166   2e-40
UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob...   166   3e-40
UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot...   166   3e-40
UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin...   166   3e-40
UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R...   166   3e-40
UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein...   166   3e-40
UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge...   165   5e-40
UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag...   165   5e-40
UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph...   165   5e-40
UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax...   165   5e-40
UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh...   165   6e-40
UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin...   165   6e-40
UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ...   165   7e-40
UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria...   165   8e-40
UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin...   165   8e-40
UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax...   165   8e-40
UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax...   164   9e-40
UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin...   164   1e-39
UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba...   164   1e-39
UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha...   164   1e-39
UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ...   164   1e-39
UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo...   164   1e-39
UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep...   164   1e-39
UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B...   164   2e-39
UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba...   164   2e-39
UniRef50_A8U412 Transcriptional regulator, XRE family with cupin...   164   2e-39
UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein...   163   2e-39
UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu...   163   2e-39
UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi...   163   2e-39
UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl...   163   3e-39
UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba...   163   3e-39
UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni...   163   3e-39
UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostri...   163   3e-39
UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B...   163   3e-39
UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat...   163   3e-39
UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin...   162   4e-39
UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat...   162   4e-39
UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe...   162   4e-39
UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid...   162   5e-39
UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro...   162   5e-39
UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi...   162   5e-39
UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy...   162   5e-39
UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin...   162   6e-39
UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl...   162   6e-39
UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu...   162   6e-39
UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin...   162   6e-39
UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr...   161   7e-39
UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F...   161   8e-39
UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria...   161   9e-39
UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0...   161   1e-38
UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P...   161   1e-38
UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac...   161   1e-38
UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ...   161   1e-38
UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=...   161   1e-38
UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator...   160   2e-38
UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me...   160   2e-38
UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ...   160   2e-38
UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca...   160   3e-38
UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin...   160   3e-38
UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost...   159   3e-38
UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De...   159   3e-38
UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re...   159   4e-38
UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI...   159   5e-38
UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa...   159   5e-38
UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ...   159   5e-38
UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Aci...   159   6e-38
UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde...   159   6e-38
UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh...   158   6e-38
UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1...   158   6e-38
UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein...   158   7e-38
UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa...   158   7e-38
UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr...   158   8e-38
UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n...   158   9e-38
UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rh...   158   9e-38
UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseu...   158   9e-38
UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean...   158   1e-37
UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba...   158   1e-37
UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A...   158   1e-37
UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ...   157   2e-37
UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi...   157   2e-37
UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre...   157   2e-37
UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Pr...   157   2e-37
UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Bu...   157   2e-37
UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH...   157   2e-37
UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco...   156   2e-37
UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al...   156   2e-37
UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Th...   156   3e-37
UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S...   156   3e-37
UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos...   156   3e-37
UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B...   156   3e-37
UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr...   156   4e-37
UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th...   156   4e-37
UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin...   156   5e-37
UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy...   155   6e-37
UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus claus...   155   7e-37
UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Ve...   155   7e-37
UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=R...   155   8e-37
UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=My...   155   8e-37
UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me...   154   1e-36
UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Pro...   154   1e-36
UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaeroc...   154   1e-36
UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium th...   154   1e-36
UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillu...   154   1e-36
UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin...   154   1e-36
UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Ac...   154   1e-36
UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De...   154   1e-36
UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De...   154   1e-36
UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales Re...   154   2e-36
UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxid...   154   2e-36
UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Op...   154   2e-36
UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri...   154   2e-36
UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cel...   154   2e-36
UniRef50_A6G914 Transcriptional regulator, XRE family with cupin...   154   2e-36
UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Cl...   153   2e-36
UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa...   153   2e-36
UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rh...   153   2e-36
UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Pa...   153   2e-36
UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B...   153   2e-36
UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax...   153   2e-36
UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=B...   153   3e-36
UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rh...   153   3e-36
UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax...   153   3e-36
UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=...   153   4e-36
UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 ...   152   5e-36
UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria Re...   152   5e-36
UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium sm...   152   6e-36
UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Co...   152   6e-36
UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost...   152   7e-36
UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B...   152   7e-36
UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My...   151   8e-36
UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri...   151   8e-36
UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusob...   151   8e-36
UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sph...   151   1e-35
UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax...   151   1e-35
UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter...   151   1e-35
UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Ch...   151   1e-35
UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacusca...   151   1e-35
UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID...   151   2e-35
UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteoba...   150   2e-35
UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID...   150   2e-35
UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De...   150   2e-35
UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Bu...   150   2e-35
UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax...   150   2e-35
UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=S...   150   2e-35
UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord...   150   2e-35
UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B...   150   3e-35
UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac...   149   3e-35
UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De...   149   3e-35
UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a...   149   3e-35
UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Va...   149   4e-35
UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hy...   149   4e-35
UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Na...   149   4e-35
UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=...   149   4e-35
UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enter...   149   4e-35
UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin...   149   5e-35
UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Ba...   149   5e-35
UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepI...   149   5e-35
UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=B...   149   5e-35
UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax...   149   5e-35
UniRef50_B2JNZ3 Transcriptional regulator, XRE family n=4 Tax=Bu...   148   6e-35
UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sp...   148   7e-35
UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh...   148   7e-35
UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac...   148   7e-35
UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin...   148   7e-35
UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin...   148   8e-35
UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Vi...   148   8e-35
UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh...   148   8e-35
UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=B...   148   8e-35
UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=...   148   8e-35
UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum...   148   9e-35
UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin...   148   1e-34
UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1...   148   1e-34
UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri...   148   1e-34
UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Mi...   148   1e-34
UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R...   148   1e-34
UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Fr...   148   1e-34
UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax...   148   1e-34

Sequences not found previously or not previously below threshold:

>UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ
          Length = 274

 Score =  198 bits (504), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
             +A G++L  +R+++GL+    ++ +G++ S +S IE  +V+ +I+TLQKL   Y  +L
Sbjct: 93  PRIAVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNL 152

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             FF   +  ++  V      ++E   +G+ ++L+        +  +  T  PG    E 
Sbjct: 153 LYFFEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTA-LNEPAMEPLLYTVAPGAGRNEN 211

Query: 124 IKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           I H+GEE   VL+G + + ++  + Y +  G S    +   H + N        +  +TP
Sbjct: 212 ISHEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTP 271

Query: 183 TTF 185
            TF
Sbjct: 272 PTF 274


>UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Clostridiales RepID=A3DDF7_CLOTH
          Length = 179

 Score =  196 bits (500), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 1/180 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G ++ ++R    ++Q   A+ + L+   IS IE D  SP+I+TL  +L+  G  L  
Sbjct: 1   MQIGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKT 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FFS+ E   +                  +++ V   +    +  I  T QPG  + E   
Sbjct: 61  FFSDSE-DKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLEDHP 119

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G V++G I + I  + Y +  G+S+   +   H   N      ++I   TP TF
Sbjct: 120 HEGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPPTF 179


>UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5
          Length = 208

 Score =  195 bits (497), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+  +R+++GL+    A+ S LT   IS +E++   P+I  L  + +  G+++  FF
Sbjct: 29  LGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFF 88

Query: 68  SEPEK--PDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           +   +  P++   V+ +   +++  +   +  +    P R L  +   + PGT + E   
Sbjct: 89  ASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYS 148

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G VL G   L +  + + L  G S++ ++  PH + N       ++   TP TF
Sbjct: 149 HEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF 208


>UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SMM2_9BACT
          Length = 182

 Score =  194 bits (493), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 2/182 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GK + E+R +  ++ R  A+ SG + S +S +E+D +SP +++L+K+    G++++ 
Sbjct: 1   MEFGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITS 60

Query: 66  FFSEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           FFS  +   +  VV       +   +  V  + + +   N  L  ++     G  +G+  
Sbjct: 61  FFSGDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDY 120

Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H GEE   V++G++ +T++G+   L  G S   N+ +PH + NT  G   ++  +TP 
Sbjct: 121 NIHLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPP 180

Query: 184 TF 185
           TF
Sbjct: 181 TF 182


>UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia
           RepID=B2A1T2_NATTJ
          Length = 192

 Score =  192 bits (489), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+ + ++RQ + L  +  +E +G++   +S IE+ +V  ++ +L K+ K   + L  F
Sbjct: 14  EIGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSF 73

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-TTGERIK 125
           F E  +     V       +++    V  +L+   + NR + M+  T + G     E++ 
Sbjct: 74  FEELNREKVSVVRKEDRKQLDIPRSNVIYQLLSP-DMNRKIEMLLVTLKSGEVEEHEKVT 132

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE G V++G++ +T+  +   L  G S   ++ IPH F N        + A TP +F
Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPPSF 192


>UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA
          Length = 178

 Score =  192 bits (488), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK++ ++R+++G+S +  AE +GLT S +S +E+D   P+I++L+K+ +   + +  F 
Sbjct: 2   LGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYFL 61

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126
             PE    P V  +Q  ++      ++ +L+     NR + ++    +PG  +  E + H
Sbjct: 62  LNPEDHS-PVVRKDQRKVLRFPQSHLTYELLSPDL-NRNMEVMMARLEPGAASCDEPLAH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VL+G + + I G+ + +  G S      IPH   +        ISA TP  F
Sbjct: 120 PGEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQF 178


>UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium
           carboxidivorans P7 RepID=C6PYK9_9CLOT
          Length = 181

 Score =  191 bits (487), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              +++ ++R+++ L+ +  +  +GL+ S +S +E +  S AI++L+K+    G++++ F
Sbjct: 4   EIAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F  PE  +   V    +   ++         +    PNR L  +  T  P    G    H
Sbjct: 64  FEIPEVNN-FLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNFSH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG + + I+  +Y++ AG S    +   H + N S    +I++  TP  F
Sbjct: 123 PGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTPLIF 181


>UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens
           ISM RepID=A3SMM9_9RHOB
          Length = 219

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS      G+ +  +R+ + L+    AE +GL+   IS IE+ +  P+++ L ++ +  G
Sbjct: 21  MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80

Query: 61  LSLSEFFSEPEKPDE---------------PQVVINQDDLIEMGSQGVSMKLVHNGNPNR 105
           +S+S FF  PE PD                  +V   +        G+  +L+  G   +
Sbjct: 81  VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140

Query: 106 TLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHS 165
            L ++   + PG+       H+GEE G VL G + L +    + L AG S+A ++  PH 
Sbjct: 141 -LELLSCRFAPGSGVDTVYAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199

Query: 166 FSNTSAGICRIISAHTPTTF 185
           + N S     +I A TP +F
Sbjct: 200 YRNPSETETIVIWALTPPSF 219


>UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales
           RepID=Q3A2S3_PELCD
          Length = 188

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  L  G++L  +R    L+Q      + LT   IS +E D   P+I+TL+ +L V+G+S
Sbjct: 2   ERNLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVS 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
           + EFF++P    E     +           + ++L+  G  NR +     T +PG    E
Sbjct: 62  MQEFFTDP-VDTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEMEE 120

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           +  H+GEE G VL G I + ++ + Y +   + +   +   HS  N   G  RI+   TP
Sbjct: 121 QDFHEGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVVTP 180

Query: 183 TTF 185
            TF
Sbjct: 181 PTF 183


>UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH
          Length = 181

 Score =  189 bits (481), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              +++  +R+++ L+ +  +E +GL+ S +S +E +  S AI++L+K+     + ++ F
Sbjct: 4   EIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F  PE      V   + ++ E+         +      R +  I          G +  H
Sbjct: 64  FKSPELHK-FLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG I+  I+G++Y +  G S    + IPH  SN      +I++   P  F
Sbjct: 123 PGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCPAIF 181


>UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile
           RepID=Q186J9_CLOD6
          Length = 187

 Score =  189 bits (480), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 2/187 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M    +  G ++  +R+ + +S    A+ S L+   IS IE++ V P+I  + K+ K   
Sbjct: 1   MYLMNIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALD 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQ-DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           +++  FF E  + D   VV       I         +L+      + +  I  T    T 
Sbjct: 61  INIGYFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTH 120

Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E + H+GEE G +++G++ +T+  ++Y L  G S+  N+ IPH + N    +C  + 
Sbjct: 121 KNSEFVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVW 180

Query: 179 AHTPTTF 185
           A TP +F
Sbjct: 181 AMTPPSF 187


>UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SJP6_9BACT
          Length = 178

 Score =  188 bits (477), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G +L EIR++  ++    ++ +G T S IS IE  K SP+I++L+K+    G ++SE
Sbjct: 1   MSYGIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISE 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124
            F   E       + +  D     ++ +SM  + +   NR +  I     P   TG +  
Sbjct: 61  LF---EDERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYY 117

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
            H GEE+G V+EG+I + I   +++L  G+    ++ +PH   N +          TP +
Sbjct: 118 HHTGEELGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPPS 177

Query: 185 F 185
           F
Sbjct: 178 F 178


>UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM
          Length = 183

 Score =  186 bits (474), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 4/186 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  +  GK++ + R + G+S R  A+ SGLT S +S IE+D V+P+I TL+ + +   
Sbjct: 1   MED--INLGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALD 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + + +FF + E   +  V   ++  I      ++  L+        +     +  PG T+
Sbjct: 59  VPMFKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGS-IEFCMMSIPPGLTS 117

Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G   + H GEE+  V+ G + + + G  Y L  G S  I     H + N    + ++I A
Sbjct: 118 GRNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFA 177

Query: 180 HTPTTF 185
            TP +F
Sbjct: 178 ITPPSF 183


>UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans
           SI85-9A1 RepID=Q1YMV2_MOBAS
          Length = 193

 Score =  186 bits (474), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 4/188 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +      G++L  +R    LS ++ A   G + S +S +E  +V+P ++ L+KL+   G+
Sbjct: 6   NSVPQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGI 65

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRTLAMIFETYQPG 117
           +++  F   ++         +  +I +G      G+ ++ +    P   L        PG
Sbjct: 66  NIAFLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPG 125

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            +T     H GEEIG VLEG   LT+ G  + L  G S+A  +  PH + N    + R++
Sbjct: 126 GSTDGAFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARVL 185

Query: 178 SAHTPTTF 185
             +TP TF
Sbjct: 186 WVNTPPTF 193


>UniRef50_P0A9U6 HTH-type transcriptional regulator puuR n=67
           Tax=Gammaproteobacteria RepID=PUUR_ECOLI
          Length = 185

 Score =  185 bits (471), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 185/185 (100%), Positives = 185/185 (100%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
Sbjct: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
Sbjct: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
Sbjct: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180

Query: 181 TPTTF 185
           TPTTF
Sbjct: 181 TPTTF 185


>UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae
           RepID=A5IJD1_THEP1
          Length = 188

 Score =  185 bits (471), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G++L ++R  +GL+Q   AE + L+ S IS +E DK SP+I TL+++L+  G  L  
Sbjct: 13  VRIGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKH 72

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FFS+ E+         +   +    +GV  +++ +G  ++ +  I  T +PG  T E   
Sbjct: 73  FFSDVEEERV-VFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESY 131

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           H+G E G V++G I L ++ + Y L  G  +       H   N+      ++   
Sbjct: 132 HEGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186


>UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae
           TMO RepID=A8F3B6_THELT
          Length = 185

 Score =  185 bits (471), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 4/187 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+ E    G+++  +RQ + L+ R  A+LSG+T   IS IE  KVSP++STL+ +L   G
Sbjct: 1   MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60

Query: 61  LSLSEFFSEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
            ++     +       + +V  ++    + S G++ +L+   + N   +M     +PG  
Sbjct: 61  ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLS--SKNNAYSMFISYLEPGAD 118

Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +      H+G E G V++GE+ +T+  +   L  G S    + IPH + N        + 
Sbjct: 119 SRESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVW 178

Query: 179 AHTPTTF 185
             +P +F
Sbjct: 179 VVSPPSF 185


>UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132
           Tax=Proteobacteria RepID=A0KZV5_SHESA
          Length = 208

 Score =  184 bits (468), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G  L  +R+ +GLSQR  A+ +G+T+S IS IE++ VSP++S+L+K+L    +SL 
Sbjct: 26  NLDIGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLV 85

Query: 65  EFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           +FFS E     E +VV   D+L+++G+  +  KL+    PNR ++++ ETY PG+ TGE 
Sbjct: 86  DFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSDTGEE 145

Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           + KH+GEE   V+EG+  LT+  + Y L AG SY  N+ +PH F N     CR++SA TP
Sbjct: 146 MLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTP 205

Query: 183 TTF 185
             F
Sbjct: 206 ANF 208


>UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes
           RepID=A4J4T3_DESRM
          Length = 180

 Score =  183 bits (466), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              +++  +R Q+ ++ +  +E +GL+ S +S +E+   S AI++L+K+     + ++ F
Sbjct: 3   EIFEKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASF 62

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F+            ++    ++         +      R L  +  T+ PG        H
Sbjct: 63  FANY-SNTNFTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQPNTFCH 121

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   VLEG ++  ++G++  +  G +    + +PH + N      +++   TP  F
Sbjct: 122 PGEEFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVLTPVIF 180


>UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2
          Length = 201

 Score =  183 bits (465), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 8/185 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R+  +R+++ L+  R AE +G++   IS IE+   +P+ +TL +L     + + + 
Sbjct: 19  DLGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQL 78

Query: 67  FSEPEKPDEPQVVINQDDLIE----MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
              PE      V  N+   ++        G S +L+        L   +    PG  T  
Sbjct: 79  LEAPESKSV-VVRKNERRRLDGHGLANDDGGSYELLTPDLNG-ALEATWVVTPPGYDTSA 136

Query: 123 -RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180
               H GEE G VL G   + ++G  + L AG S    + IPH + N S    C  I   
Sbjct: 137 TPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAIWVS 196

Query: 181 TPTTF 185
           TP T+
Sbjct: 197 TPPTW 201


>UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1
          Length = 236

 Score =  183 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 1/185 (0%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +++ G+A G ++  +RQ+   +    A  +G++   +S +E+   SP+I++L  +    G
Sbjct: 53  LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +++  F   P   +      +Q               + N    R L  I     PG   
Sbjct: 113 VTVQYFVETP-SEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQKR 171

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E   H GEE   V+EGE+ LT+ G+ + L AG S    + +PHS+ NT+     ++   
Sbjct: 172 SEVTTHAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVWVG 231

Query: 181 TPTTF 185
           TP  F
Sbjct: 232 TPRLF 236


>UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN
          Length = 185

 Score =  181 bits (460), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 5/184 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E +  G++L ++R ++GL+Q   A    L+   IS +E+D  SP+I+TL  +L+  G +L
Sbjct: 5   ELMNIGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNL 64

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM--KLVHNGNPNRTLAMIFETYQPGTTTG 121
            +FF+  E   E ++V +++D+ E     ++   + V        +  I  T +P     
Sbjct: 65  KDFFNNDE---EEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYK 121

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H+GEE G VL G + + +  + Y    G+S+       H  SN    + +++   T
Sbjct: 122 NDEPHEGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVST 181

Query: 182 PTTF 185
           P  F
Sbjct: 182 PPYF 185


>UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria
           RepID=Q1IRF9_ACIBL
          Length = 292

 Score =  181 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL  +R  +GLS  + AE  G++   +S IE+  +S +++TL+KL K Y L++ + 
Sbjct: 117 NVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDL 176

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERIK 125
           F   +      +V   +      S GV M+L+  GNP   +        PG  +G E   
Sbjct: 177 F--DQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP--VMEPHLFHVAPGAGSGDEEYS 232

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+GEE   VL G + L ++G++Y L  G S+   +  PH +SNT +    ++  +TP TF
Sbjct: 233 HEGEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPPTF 292


>UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica
           DFL-43 RepID=A9D7J9_9RHIZ
          Length = 205

 Score =  181 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R   GL  +  A  +  + S +S +E   VSP+I+ L ++ KV  +++S
Sbjct: 21  DVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNIS 80

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             F+  E+            ++         G++++ +     +  L        PG  +
Sbjct: 81  GLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAAS 140

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              I+H+GEE+G V+EG + LT+  Q   L AG S+  ++  PHS+ N    + R++  +
Sbjct: 141 DGAIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARVVWVN 200

Query: 181 TPTTF 185
           +P ++
Sbjct: 201 SPPSY 205


>UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes
           RepID=C6Q1A6_9CLOT
          Length = 184

 Score =  180 bits (458), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  L  GK L+ IR+Q+GLS  + AEL+G++   ++ IE+   +P ++TL K+     
Sbjct: 1   MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S F  E  +        N   ++E   + +    +   +  R   +     +PG   
Sbjct: 61  VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVY-PLFPYDNTRRFEVFTIELEPGCNH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                ++G EE   V +GE+   I    Y L  G +       PH + NT+  I   
Sbjct: 120 KSVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEIVIF 176


>UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium
           RepID=A5TRU5_FUSNP
          Length = 184

 Score =  179 bits (455), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 4/184 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G++L + R  +G+S R  A    L+ S +S IEQ K SP+I  L+K+     + ++ 
Sbjct: 1   MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAY 60

Query: 66  FFSEPEKPDEPQVVINQD--DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-E 122
              + E        I ++    IE     + M ++ + N  + +  I         +G +
Sbjct: 61  LIEDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRD 120

Query: 123 RIKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              H   EE   +LEGE+ + +  + Y L  G S    + + H F NTS    + +   +
Sbjct: 121 FYSHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVS 180

Query: 182 PTTF 185
           P TF
Sbjct: 181 PPTF 184


>UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria
           RepID=B2JW16_BURP8
          Length = 234

 Score =  179 bits (454), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R  Q L+ +  AE +G + S +S +E    +P+++TL ++      +++   
Sbjct: 45  LGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIAALV 104

Query: 68  SEPEKPDEPQVVINQDDLIEMG------------SQGVSMKLVHNGNPNRTLAMIFETYQ 115
           S P     P    ++   +                  + ++ +    P + L       +
Sbjct: 105 SGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIHVLE 164

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           P   + E+I H GEE+G VLEGE+ LT+  + Y L AG S+   +  PHS+ N    I R
Sbjct: 165 PLARSDEQISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGDVITR 224

Query: 176 IISAHTPTTF 185
           ++  +TP TF
Sbjct: 225 VLWINTPPTF 234


>UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium
           RepID=A6LSV7_CLOB8
          Length = 184

 Score =  178 bits (452), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +     G +L EIR ++ LS   AA+L+G++ + +  IE+ + +P +STL K+     
Sbjct: 1   MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S F  E +   E     N D +IE  ++      +   + NR   +     + G   
Sbjct: 61  VSFSFFIDEEQDELEIVDQNNIDPIIEDDARMKLY-PIFPFDANRGFEIFTIELESGCNH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                  G EE   V +GE+ + I+ Q Y L  G S      IPH + N S      
Sbjct: 120 VSTPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKAIF 176


>UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL
          Length = 189

 Score =  178 bits (452), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             GK++ ++R  + L+ +  +E + L+   +S +E+   + AI +L K+ K   +SL+ F
Sbjct: 4   DIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--RI 124
           F  P+K  +  +   + +++++ +       + N   +++         P  +       
Sbjct: 64  FQAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENIISY 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H+GEE   VLEG + L IN  +  L  G S   ++ I H+++N ++   R+++ HTP  
Sbjct: 124 QHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTVHTPNM 183

Query: 185 F 185
           F
Sbjct: 184 F 184


>UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia
           RepID=A9ALB0_BURM1
          Length = 193

 Score =  177 bits (450), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G ++  +RQ+   +    A  +G++   +S +E+   SP++++L  + +  G+++  F
Sbjct: 16  ALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYF 75

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
              P   +       Q               + N +  R L  I     PG    E   H
Sbjct: 76  VDTP-SEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVTTH 134

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            GEE   V+EGE+ LT+ G+ + L AG S    + +PHS++NT+     ++   TP  F
Sbjct: 135 AGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRLF 193


>UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis
           ATCC 14580 RepID=Q65LQ1_BACLD
          Length = 183

 Score =  177 bits (449), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 2/184 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+       + +  +R+ +  S  + + ++G++   ++ IE+   SP I+TL K+     
Sbjct: 1   MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S +     P       V  ++   +  G +  +       +  +   + +    PG   
Sbjct: 61  VSFTSLAERPAGEPT-VVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGCVH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                H G EE   V +G + +T       L  G +        H++ N +       + 
Sbjct: 120 ESEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTASCYTL 179

Query: 180 HTPT 183
               
Sbjct: 180 IYYP 183


>UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KY58_9GAMM
          Length = 219

 Score =  177 bits (449), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           ++    + G  + ++R+ +G++    +++S L+   +S +E+    P+I  L  + +  G
Sbjct: 31  LAKTDRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALG 90

Query: 61  LSLSEFF----SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           +++S FF    +  +      VV + +      + G+  +L+      R + M+  T+ P
Sbjct: 91  VTISWFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNLS-RQIEMLKCTFPP 149

Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           GT++G+    HQGEE G +L G++ L I      L  G S+A  +   H ++N       
Sbjct: 150 GTSSGDVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETV 209

Query: 176 IISAHTPTTF 185
           +I   TP ++
Sbjct: 210 VIWTITPPSY 219


>UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2QWJ8_9PLAN
          Length = 183

 Score =  176 bits (448), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 1/176 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L   +R+ E+R   GL+    AE +G+T   IS IE  +V+P++ TL K+ + +G+S ++
Sbjct: 4   LQLSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTAD 63

Query: 66  FFSEPEKPDEPQVVINQDDL-IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
             +  ++  +  VV  ++   I      +    + +    + +  +    QPG    E++
Sbjct: 64  LLAGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKL 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H+GEE   V++G I      + Y L  G     +  + H+  N    I R+I  +
Sbjct: 124 AHEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVVY 179


>UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales
           RepID=B5EB42_GEOBB
          Length = 188

 Score =  176 bits (448), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 8/188 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS E    G R+ ++R  + L+ +  A  +G + + IS IE D VSP I+TL K+ K + 
Sbjct: 1   MSSE-YNIGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFD 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLI-------EMGSQGVSMKLVHNGNPNRTLAMIFET 113
           + L++FFSE E     +VV      I       E   QG   + +     N+ +     T
Sbjct: 60  VKLAQFFSEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVT 119

Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
                       H GEE   V+ G     +  Q   L  G S    + + H   +     
Sbjct: 120 LTEKAPEANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKE 179

Query: 174 CRIISAHT 181
            R++   T
Sbjct: 180 VRVLVVVT 187


>UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces
           sp. AA4 RepID=UPI0001B57A23
          Length = 178

 Score =  176 bits (447), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 3/176 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+ E R  +GL+ R+ A+ +G++   IS +E+    P++ T++++ +V  + L   F EP
Sbjct: 5   RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64

Query: 71  EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG-TTTGERIKHQGE 129
           ++     +  +    I      ++      G     L ++    +PG  ++ E   H  E
Sbjct: 65  DEETVAVIRHDDRYRISSPHHAITYTRASPG--GAKLEVLEGVLEPGGVSSDELRSHPSE 122

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           E   V+ G + + +  Q + L  G S   ++ +PH F N      R + + TP ++
Sbjct: 123 ECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPPSY 178


>UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771
           RepID=UPI00019046BF
          Length = 280

 Score =  176 bits (447), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +  A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L
Sbjct: 97  QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 156

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQG-----VSMKLVHNGNPNRTLAMIFETYQPGT 118
             FF   ++     VV  +  L      G        + +     +R +   +  +   +
Sbjct: 157 DHFFKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDS 216

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E  +H   E   VL G +V+ ++G++  L AG +   ++ +PHS+      I   + 
Sbjct: 217 PPSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISSALV 276

Query: 179 AHTP 182
             +P
Sbjct: 277 VISP 280


>UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales
           RepID=UPI0001B554B1
          Length = 210

 Score =  176 bits (447), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+RLS +R + GL+    A  +G++   +S IE+   +P+ +TL KL     + +  FF
Sbjct: 31  LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90

Query: 68  SEPEKPDEP--QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ERI 124
              E   EP   V       + +  +G+  +L+      R L M+     PG +      
Sbjct: 91  DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGR-LGMMRAEIPPGYSNALAPH 149

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           +H+GEE+  +LEG + +T+ G++  L AG +   +  +PH F N       I+ A TP +
Sbjct: 150 RHEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPPS 209

Query: 185 F 185
           F
Sbjct: 210 F 210


>UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JLN2_AGRRK
          Length = 205

 Score =  176 bits (446), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL   RQ  G++ +  A  +  + S +S IE  K SP++  L +L++V G ++   
Sbjct: 23  RLGTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWM 82

Query: 67  FSEPEKPDEPQVVINQDDLIEMG----SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
           F E +  +          LI +      +G+S++ +   +P   L       +PG  +  
Sbjct: 83  FEEADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGESAG 142

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            I+H GEE+G +L G I L +  + + L  G S+   + +PH + N       I   +TP
Sbjct: 143 PIQHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNTP 202

Query: 183 TTF 185
            TF
Sbjct: 203 ATF 205


>UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD
          Length = 197

 Score =  175 bits (444), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + +  G ++ + R+ +GL+    ++ SGL+   +S IE+   SP++ ++ ++    G+ L
Sbjct: 12  QKMGLGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPL 71

Query: 64  SEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           S  F      +       V       +++G+ GV+ +L+        + +   + +PG  
Sbjct: 72  SWLFDNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGG-EMQIYLVSIRPGGQ 130

Query: 120 TG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +G E   H+GEE G VL G + LT++ +   L  G S+   + + H F+N       ++ 
Sbjct: 131 SGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVW 190

Query: 179 AHT 181
           A++
Sbjct: 191 ANS 193


>UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales
           RepID=B0UFY6_METS4
          Length = 201

 Score =  174 bits (443), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 6/188 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +++ L  G+++  +R+ +GL+ ++ A   G++   +S IE+++    I  L+++  + G+
Sbjct: 16  NEQELLLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGV 75

Query: 62  SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
            LS FF      P +  +  V   +   +     G++ +L+        L ++  T  PG
Sbjct: 76  QLSWFFQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNLNG-PLEVLLSTIAPG 134

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           + + +   H G E G VL G + L I  + + L  G S++ ++   H  +N      +++
Sbjct: 135 SDS-DFYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVV 193

Query: 178 SAHTPTTF 185
              TP  +
Sbjct: 194 WIITPPHY 201


>UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67K52_SYMTH
          Length = 196

 Score =  174 bits (442), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 4/177 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G R+ + R Q+G++ +  AE SGL+   +  +E DK SP++  L +L    G+ ++ 
Sbjct: 8   MSLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVAL 67

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERI 124
                E      V  N      M  +G+S++L+    P R+L M+     PG  T G+  
Sbjct: 68  LLISQE-ERAHVVRANARQGYSMNGEGLSVQLLSA--PGRSLKMMLLELAPGAATGGDNH 124

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            H+GEE   VL+G +      ++  L  G S   N  IPH   N      RI+   T
Sbjct: 125 VHEGEECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181


>UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus
           RepID=Q0S834_RHOSR
          Length = 187

 Score =  174 bits (442), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 4/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
             +A G  +   R   GL+ R  A  +GL+   +S  E     P++  L ++ +V G + 
Sbjct: 8   LAVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTA 67

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
                +  +     V   +     +    V   L       R +     T QPG+  GE 
Sbjct: 68  HALLEQGARTPTSLVRSREGRRFALSDGAV---LRFCSTGVRAMEPNEVTAQPGSQAGEH 124

Query: 124 IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            +H GEE   V++G + + +   + Y L  G +      +PH + N +A   R +   TP
Sbjct: 125 TEHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLITSTP 184

Query: 183 TTF 185
            +F
Sbjct: 185 PSF 187


>UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae
           RepID=Q5LWB9_SILPO
          Length = 193

 Score =  174 bits (441), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%)

Query: 1   MSDEGLA-----PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL 55
           MS+          G R+ E+R+ +GL+ ++ A  +GL+   +S +E+    P++  L  +
Sbjct: 1   MSETAPRQTTPIIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVI 60

Query: 56  LKVYGLSLSEFFSEPE---KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE 112
               G+ ++ FF +P+    P+   VV          S GV  +L+        L +I  
Sbjct: 61  STALGVGINWFFPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSG-QLELIVT 119

Query: 113 TYQPGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
           T+ PG  +G E   H+GEE G ++EG++ +T+  +   L  G +    + IPH + N   
Sbjct: 120 TFDPGAGSGAELYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGP 179

Query: 172 GICRIISAHTPTTF 185
           G   +I A TP  +
Sbjct: 180 GRTVMIWAVTPPYY 193


>UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN
          Length = 189

 Score =  174 bits (441), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 81/175 (46%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +  +R  +  + ++ AE + L+ S +S +E+ K S  + +L+K+ +  G+S   F
Sbjct: 4   TIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSPGYF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           FS        QV     +   +       + + +   N TL  I  T  P    G    H
Sbjct: 64  FSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGMPFVH 123

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           QG+E   VLEG + + +  +++ L  G S  +++ +PH++ N +  + R +  ++
Sbjct: 124 QGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCVNS 178


>UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA
          Length = 210

 Score =  174 bits (441), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 4/180 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G+ +  +RQ+ GLS +  A  +GL++  IS +E+ +  P+I TL+ L     + +S
Sbjct: 23  DQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPIS 82

Query: 65  EFF--SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121
            FF  ++P       V  N   L+ + + GV  + +        L +   T  PG ++G 
Sbjct: 83  YFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKG-QLELYELTLNPGASSGT 141

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           + ++H GE+ G +L G + L ++ Q + L AG S+   + +PH F N +    R+I   T
Sbjct: 142 DFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWVTT 201


>UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZDG4_BREBN
          Length = 185

 Score =  173 bits (440), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +     G+ +  IR+++ LS  + +E++G++ + +  IE+ K +P I+TL K+     
Sbjct: 1   MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LS S   S+  KP+   V   + + I        +  +   NP +   +   T +PG   
Sbjct: 61  LSFSSLISQY-KPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                  G EE   V EG + + +N Q Y +    +       PH + N    I +    
Sbjct: 120 IAEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVKCSVI 179

Query: 180 H 180
            
Sbjct: 180 I 180


>UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA
          Length = 185

 Score =  173 bits (440), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 3/185 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D+ +  G  +  IR ++GL  +  AE   ++ S +S IE+   +P+++T++ + +   + 
Sbjct: 2   DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT--TT 120
           L +FF EPEK D    ++ ++D   + ++ +  +L+    P   +  +  T+      T+
Sbjct: 62  LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTN-IECMKMTFTEKNAETS 120

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H+GEE+  +L G++ +TI  Q   +  G S  I    PH ++N +AG   ++ + 
Sbjct: 121 IEPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSV 180

Query: 181 TPTTF 185
           TP  F
Sbjct: 181 TPPEF 185


>UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1
           Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR
          Length = 182

 Score =  173 bits (439), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 105/180 (58%), Gaps = 2/180 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G R   +R++ GLSQR  A+ +G+T+  IS IE + VSP++++L KLL     S++EF
Sbjct: 4   EIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEF 63

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-K 125
           F+  E P   Q    +    E+G   +S + + + + +R + M+ ET  PG  TG+ +  
Sbjct: 64  FAVDE-PKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLA 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           H+G+E G +++GE+ LT++ +   L  G SY  ++   H F NTS   C I+SA++P +F
Sbjct: 123 HEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSPASF 182


>UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=C3MAN4_RHISN
          Length = 220

 Score =  173 bits (439), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 2/182 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R    LSQR  A+ +G+T+S IS IE +  +P++  L+++L    + L+
Sbjct: 40  SVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGLA 99

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           EFFS  E     +     ++L+E+G   +S + + +    R+L ++ E YQPG  TG+ +
Sbjct: 100 EFFSF-EPERPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVL 158

Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H+GEE G VL G + +T++ +   L  G +Y   +  PH F       C +ISA TP 
Sbjct: 159 LVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPP 218

Query: 184 TF 185
           TF
Sbjct: 219 TF 220


>UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14
          Length = 203

 Score =  173 bits (439), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 2/182 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G RL  +R+   LSQR  A  SG+T++ IS IEQ++VSP+IS+L+KLL+   ++L++
Sbjct: 22  MDTGARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLAD 81

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI- 124
           FF+  + P + Q V    D  ++G  GV + LV    P+R +  + E Y PG  +GE   
Sbjct: 82  FFTFDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPI 141

Query: 125 -KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
              +GEE G V  G + LTI+GQ   L  G  Y   T +PH F N       IIS++TP 
Sbjct: 142 VHSEGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTPA 201

Query: 184 TF 185
            F
Sbjct: 202 NF 203


>UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales
           RepID=Q39Q24_GEOMG
          Length = 198

 Score =  173 bits (439), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 7/184 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G+++ ++RQ+Q L+ +  +ELSGL+   +S IE D+V+P I+TL K+ K   + + 
Sbjct: 12  ELRLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIH 71

Query: 65  EFFSEPEKPDEPQVVINQDDLIE------MGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
            FF E E   +  +                   G   + +  G  ++ +      ++   
Sbjct: 72  YFFEEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTE 131

Query: 119 TTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                  +H G E   +LEGE+          L  G S   ++  PH + +        +
Sbjct: 132 WDDAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAV 191

Query: 178 SAHT 181
           +   
Sbjct: 192 AVLY 195


>UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178AA45
          Length = 189

 Score =  173 bits (438), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 2/181 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M       G+ L  IR+ +GLS    AEL+G++ + +  IE+   +P IS L +++   G
Sbjct: 1   MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S +    E E  +   V  +  +          +  + + N             PG   
Sbjct: 61  ISFTTLIEEAE-TEVTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGCDH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           G    + G EE   V +GE+ L    + Y + AG S   +   PH + N      +  + 
Sbjct: 120 GSEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFYTI 179

Query: 180 H 180
            
Sbjct: 180 I 180


>UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7
           Tax=Rhodobacteraceae RepID=Q28QP9_JANSC
          Length = 205

 Score =  173 bits (438), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+   A G  + + R+Q  L+ +   + +GL+   +S +E+ + +P++ TL ++ +   +
Sbjct: 6   SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L  F + P KP +            +    +  + V    P   L+       PG  + 
Sbjct: 66  ELEYFIATP-KPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYAS- 123

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E + H+GEEI  +L GEI  T+ GQ + L  G S   +   PHS+SN +    RI+   T
Sbjct: 124 EVVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWTGT 183


>UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2
           Tax=Bacteria RepID=C1ZLV1_PLALI
          Length = 189

 Score =  172 bits (437), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 3/179 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +   +R+   R  Q L+  + A  +GLT S  S +E  +++P++ +L ++    G+S+S+
Sbjct: 4   VELAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSD 63

Query: 66  FFSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
                ++  +  V+   +  +      +  +  + + +  P+R +     T   G    +
Sbjct: 64  LVEGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRKD 123

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            + H+GEE   VL G++ L  N +   L  G S   +   PH   N      R++    
Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCVFY 182


>UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD
          Length = 189

 Score =  172 bits (437), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 10/185 (5%)

Query: 1   MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M+ E L    G+RL  IR  +G++  + A+ +G++   +  IE+ + +P +STL K+   
Sbjct: 1   MNKEMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATG 60

Query: 59  YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPG 117
             +S + F    E       VI +D ++ +       +  +   + ++   +     + G
Sbjct: 61  LHVSFTAFI---EDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAG 117

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
           T        QG  E   V +G + + I  + Y L  G          H + N S+     
Sbjct: 118 TDHTSEGHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEA-- 175

Query: 177 ISAHT 181
               T
Sbjct: 176 -CVFT 179


>UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ
          Length = 203

 Score =  171 bits (434), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G+R+ E+R + GL+ +  A+ SG++   +S +E+DK +P++ TL  +    G+ +  F
Sbjct: 21  AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
            S P KP +      +     +    +  + +    P  TL+ +      G  + E   H
Sbjct: 81  ISTP-KPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYAS-EITAH 138

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            GEE+  VL+G +  T+    + L  G S       PHSF+N      R++   T  
Sbjct: 139 VGEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSP 195


>UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia
           multivorans RepID=A9ABP2_BURM1
          Length = 281

 Score =  171 bits (434), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M  + +  G+R+  +R++   +    A  + L+   +S +E+     +IS+L  + K   
Sbjct: 1   MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + L     +P +  +P     + +   +       + +        L  +      G  +
Sbjct: 61  VPLGALIDQP-RQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRS 119

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H G+E   VL G I  TI  +DY L  G S   +    H  +N   G   +I+  
Sbjct: 120 -EWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178

Query: 181 TPTTF 185
           T   F
Sbjct: 179 TLPLF 183


>UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae
           DSM 12333 RepID=C5BVJ0_BEUC1
          Length = 201

 Score =  171 bits (434), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL ++R+Q GL+ R  A  +GL+ + +S IE  +  P+I++L+KL + +   ++  F
Sbjct: 25  LGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLF 84

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK-H 126
            EP+ P        +  L+   +  ++ + V  G  +  L ++     PG  + E  + H
Sbjct: 85  HEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGD--LEVLRSVLAPGDVSAEGPRGH 142

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
              E   VL GE+V+TI   D+ LVAG++   ++  PH + N SA    I+   TP T
Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPPT 200


>UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZGC0_BREBN
          Length = 185

 Score =  171 bits (433), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 2/186 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M       G ++  IR+++G +    A  +GL+   +S +E+    P++ +L K+ K   
Sbjct: 1   MRLPIETIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALE 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             +  FF + ++       + +   +       +  L+  G   + L M+     PG   
Sbjct: 61  SPIIHFFEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAK-LGMLEVRLMPGEMA 119

Query: 121 GERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
            ++  + +GEE  TV+ G +    N +++ L AG S + ++   HS  NT      +I +
Sbjct: 120 VDKFVQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWS 179

Query: 180 HTPTTF 185
             P  F
Sbjct: 180 VNPPQF 185


>UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter
           RepID=B8HGK7_ARTCA
          Length = 201

 Score =  170 bits (432), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 4/185 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+     G ++  +R+ +G++  R +E++GL+ + +S IE+   +P+ +TL +L     +
Sbjct: 14  SELLATVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDI 73

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLI---EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
            +  FF   ++   P V  +    +      S G ++  +   + + T+   + +  PG 
Sbjct: 74  PVGRFFIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGH 133

Query: 119 TTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            T      H GEE   ++ G   + ++G  Y L  G S   ++ IPH + N+   +C  I
Sbjct: 134 DTSATPFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAI 193

Query: 178 SAHTP 182
             + P
Sbjct: 194 WVNAP 198


>UniRef50_A5V718 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Sphingomonas wittichii RW1 RepID=A5V718_SPHWW
          Length = 201

 Score =  170 bits (432), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 3/184 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D  ++ G+ + + R++  L+    A  S L+ S IS  E+ K +P+I +L +L +   +
Sbjct: 11  TDPMMSFGELIRDRRKRLKLTLNEVALRSDLSVSFISLAERGKATPSIVSLLRLAQALDV 70

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            +S F + P+  +   +    D         V+   +  G+ N+ +        PG    
Sbjct: 71  DISYFLAPPQTNN--ILHRAADPEYYPIDSPVTYIRLSAGHVNQKMDSFIYIIPPGPIF- 127

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            R+   GE    +LEGE+   +    + L  G S   +T   ++  N      +++   T
Sbjct: 128 PRVHRDGESFYYMLEGELHFEVGDDSFDLGPGDSLHFDTRHSYAMRNCGEKPVKVLWVGT 187

Query: 182 PTTF 185
           P  F
Sbjct: 188 PVLF 191


>UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio
           RepID=A6CYI2_9VIBR
          Length = 185

 Score =  170 bits (432), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 96/184 (52%), Positives = 136/184 (73%), Gaps = 2/184 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +    GK ++++R+++GLSQR  AE +G+THSAIS+IE  KVSP++S+LQK++ V+ LSL
Sbjct: 2   DNHQIGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFSLSL 61

Query: 64  SEFFS-EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG- 121
           SEFF+ E ++  E +VV+  +DLIE+GS+ VSMKLV+NG+  + +  + E Y P +TTG 
Sbjct: 62  SEFFTLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNSTTGA 121

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             IKH+GEE+GTVL GE+ L  NG+ Y + AG+SY I+T IPH F+N S   CR+ISAHT
Sbjct: 122 SNIKHEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMISAHT 181

Query: 182 PTTF 185
           P  F
Sbjct: 182 PKAF 185


>UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium
           RepID=B5ZXQ7_RHILW
          Length = 189

 Score =  170 bits (431), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 4/183 (2%)

Query: 1   MSDE-GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59
           M ++   A G R+ ++R  +GL+    A  SG++ + IS IE+ + SP  S L ++    
Sbjct: 1   MEEQLEQAIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAAL 60

Query: 60  GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           GLSLS FF+E  +   P     +  +      G   + V        + ++   +  G  
Sbjct: 61  GLSLSAFFAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGAR 120

Query: 120 TGERIK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                    H   +   + +GE+ +T     Y L  G    +  G  H F N      R 
Sbjct: 121 VSFPPHAASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARY 180

Query: 177 ISA 179
              
Sbjct: 181 CVV 183


>UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria
           RepID=B3QIN2_RHOPT
          Length = 207

 Score =  170 bits (431), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 2/181 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D     G  L  +R +QG S  R A+ SG++ + +  IE  K  P I TL K+    G+ 
Sbjct: 21  DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            +   +         +      L+       + + +   +  R +        P      
Sbjct: 81  FARLIATETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHREDA 140

Query: 123 RIKHQG-EEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                G  E   V +G + +T    +   L AG +   +  +PHS+ N  A    +    
Sbjct: 141 DPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLVM 200

Query: 181 T 181
           T
Sbjct: 201 T 201


>UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K4_PELCD
          Length = 188

 Score =  169 bits (430), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK+L   R  +GL+ +    LSG++ + IS IE+    P++  L KL    G+S+  F 
Sbjct: 6   IGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYFV 65

Query: 68  SEPEKPDEPQ-VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK- 125
            E EK          Q + +        +  +  G  + +  ++ +T +    +G+    
Sbjct: 66  EEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGDAPMV 125

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           H GEE   VL+G +   I  + Y L +G S +    +PH + N   G   ++   +P 
Sbjct: 126 HTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVVSPA 183


>UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter
           sphaeroides RepID=B9KL60_RHOSK
          Length = 211

 Score =  169 bits (429), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 7/186 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+   L  G+RL +IR+   LS    +E SG++   +S +E+    P++ T++++ +  G
Sbjct: 1   MNSNHL-IGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALG 59

Query: 61  LSLSEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
           +        P++ +       V   Q   + +   G++  LV   + +  + ++    +P
Sbjct: 60  VPPFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFD-AMQLMTVVMEP 118

Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
           G+ +G    +H+G ++G +L G + L ++G+ + L AG  +A ++ +PH F N       
Sbjct: 119 GSKSGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAE 178

Query: 176 IISAHT 181
           ++  +T
Sbjct: 179 VLWINT 184


>UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45
           RepID=D0D911_9RHOB
          Length = 205

 Score =  169 bits (429), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)

Query: 1   MSDEGLA---PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M D G      G RL  +R+  GLS +  +  + L+  ++S IE+D  SP++ TL KL  
Sbjct: 15  MKDHGRNDSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLAT 74

Query: 58  VYGLSLSEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
            + + LS FF++P  ++ D   +  +    +++ +QG+   L+     +  L ++     
Sbjct: 75  SFDVPLSYFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALD-GLQLMMVRMT 133

Query: 116 PGTTTG-ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           P +++G E   H+G + G VL G + L + G+ Y L  G S+   +  PH F        
Sbjct: 134 PESSSGPEAYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPA 193

Query: 175 RIISAHT 181
            ++  +T
Sbjct: 194 EVLWINT 200


>UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9
           Tax=Alphaproteobacteria RepID=Q1GM81_SILST
          Length = 190

 Score =  169 bits (429), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G RL  +R++  LSQR  A+ +G+ +S IS IE  K++P++  L+++L    +SLS
Sbjct: 10  DEDLGPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPISLS 69

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-R 123
           +FF+  E   E       +DL E+G   VS+K V      R + +++ETY+ G  TG   
Sbjct: 70  DFFAF-EPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTGRVM 128

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             H+GEE G VL G I +T+  Q   L  G +Y  ++  PH F       C ++SA TP 
Sbjct: 129 YGHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSACTPP 188

Query: 184 TF 185
           TF
Sbjct: 189 TF 190


>UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH
          Length = 204

 Score =  168 bits (426), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +  L   K L  IR+++ LS  + ++L+G++ + I  IE+ + SP ++T+ K+     
Sbjct: 20  MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S +   + P+ PD   ++ N   ++   S    +        +R   +     +     
Sbjct: 80  VSFTSLINNPQ-PDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKL 138

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 +G EE  TV EGE+ + IN   Y L +G +       PH++ N    + R+   
Sbjct: 139 SSEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRLSMT 198

Query: 180 HT 181
             
Sbjct: 199 IY 200


>UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34
           Tax=Burkholderia RepID=Q39C45_BURS3
          Length = 286

 Score =  168 bits (426), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M  + +  G+R+  +R++   +    A  + L+   +S +E+     ++S+L  + K   
Sbjct: 26  MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + LS    +P +  +P     +     + ++    + +        +  +      G  +
Sbjct: 86  VPLSALIDQP-RQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMMEGYRS 144

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E + H G+E   VL G I  T+  +DY L  G S   +    H  +N   G   +I+  
Sbjct: 145 -EWVAHGGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203

Query: 181 TPTTF 185
           T   F
Sbjct: 204 TLPLF 208


>UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus
           RepID=B8G9C1_CHLAD
          Length = 211

 Score =  168 bits (426), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 2/179 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  GKRL  +R++Q +S R  AE SGL  + +S IE  + SP++STLQ+L     + +S
Sbjct: 19  HVDVGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPIS 78

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG-ER 123
            FF+ PE P +  V       I       ++  +  G  NRTL  +  T  PG  +G E 
Sbjct: 79  AFFT-PEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEA 137

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           I H G+E    + G+I+ T+  Q Y +  G S      +PH + N  +   + +    P
Sbjct: 138 IIHTGQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCP 196


>UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ
          Length = 201

 Score =  168 bits (425), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G RL   R   GL+  + A+ S  + S IS IE  + SP+++ L ++      +++   
Sbjct: 26  LGVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAALT 85

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
           +E    + P  +  +  +I+ G   +S++ +        L        PG  +   I+H 
Sbjct: 86  TEEAPREGPIRLSGERPVIKAGE--ISLERITLPKRGGLLQANIHIVPPGEASDGLIEHV 143

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE+G VLEG + L +  + + + AG ++  ++  PH + N      RI   +TP TF
Sbjct: 144 GEEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTPATF 201


>UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4
           Tax=Actinomycetales RepID=D2BA96_STRRD
          Length = 192

 Score =  167 bits (424), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 4/181 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D   A G R+ E+R  +GL+ ++ A  + ++ S +S++E+ + +P +  L ++    G
Sbjct: 1   MVDLA-ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLG 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +SL+E  +EPE      V    D        G    ++    P      I  T  PG   
Sbjct: 60  VSLAELVAEPE-DRRVIVRRAADQDTVDEPGGWHRSILTPVVPGVNFEWIRTTLPPGCDA 118

Query: 121 GERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           G    +     E   V  G + LT+  Q   L  G S        H + N     C    
Sbjct: 119 GRFPAYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYV 178

Query: 179 A 179
           A
Sbjct: 179 A 179


>UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1
           Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT
          Length = 248

 Score =  166 bits (422), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D     G+ L  +R  +GLS  R A+LSG++ + +  IE  + +P I+ L K+ +   +
Sbjct: 62  EDLMPVVGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDV 121

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             S F + P       +  ++   +       S + +   +  R +          +   
Sbjct: 122 PFSAFVAAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQ 181

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                 G  E  TV  G + +    + + L  G +      I H++ N            
Sbjct: 182 SHPHPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVM 241

Query: 181 T 181
           T
Sbjct: 242 T 242


>UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales
           RepID=B9JI22_AGRRK
          Length = 204

 Score =  166 bits (422), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 5/182 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           ++  +  G+R+  +R ++ LS    A  +G++  A+S IE+   S  +  +  L     +
Sbjct: 16  NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75

Query: 62  SLSEFFSEPEKPDEPQ--VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
             S    +  +P      V  N    + + ++G+S  L+    P   L  +    +PG  
Sbjct: 76  EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSP--PGAALTGMQVIVEPGGG 133

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           T E   H G E G V  GE+ L ++   Y L  G S+A  + +PHSF N     C I+  
Sbjct: 134 T-ETYAHTGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWV 192

Query: 180 HT 181
           +T
Sbjct: 193 NT 194


>UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PEN9_9FIRM
          Length = 188

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 3/182 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +   R++Q +S +  A    ++ S +S IE +K  P+++TL+++    G+++S+ 
Sbjct: 3   QLGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKL 62

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIK 125
             E E      +       +     G+ ++ +   +P + +        P   +G+    
Sbjct: 63  LGEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPYT 122

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYA-INTGIPHSFSNTS-AGICRIISAHTPT 183
           H G+EI  VLEG I L ++ +   +  G SY  I+    H F N S     R++    P 
Sbjct: 123 HAGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNPP 182

Query: 184 TF 185
            F
Sbjct: 183 YF 184


>UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Oceanicola batsensis HTCC2597 RepID=A3TY07_9RHOB
          Length = 213

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 5/182 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+R+ ++R+ +GL+ +  A+ SGL  S IS IE+  ++P       L +  G+ ++  
Sbjct: 22  ELGQRIRQLREARGLTLQTIADRSGLAISTISKIERGLMAPTYDRFSGLARGLGVDVTHL 81

Query: 67  FSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTTTGE 122
           FS            +    +   + ++  + +++      + +  +  T +P    +   
Sbjct: 82  FSPGGRRFEAGTVALARAGEFGFLETENYAYEMLFPDVRGKAMIPMCGTLKPLQKMSFER 141

Query: 123 RIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            + H GEE   V+ G +V+ + G ++  L  G S   ++G  H ++       RI+   T
Sbjct: 142 MVNHPGEEFLMVMSGRVVVQLEGREEIVLDTGDSLYFDSGRGHLYAAEGDEGARILVVCT 201

Query: 182 PT 183
             
Sbjct: 202 AP 203


>UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AS09_RUBXD
          Length = 292

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 5/178 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G+RL  +R +   + +  +E +GL+ S IS +E+     ++++L++L + YG+++ E F 
Sbjct: 119 GERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELFG 178

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
              + + P V  ++  ++E    GV  + +  G   + +   +     G  +     H G
Sbjct: 179 TDLEQNSPLVRAHERPVMEW-DNGVRFEEMAPG--KKAMDPSYVRVPAGAGSEGFYSHDG 235

Query: 129 EEIGTVLEGEIVLTINGQ-DYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           EE   V+ G + + +  Q  Y +  G +   ++  PH +          +  +TP TF
Sbjct: 236 EEFVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWWA-GDEPVEAVYVNTPPTF 292


>UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QJV6_DESAH
          Length = 190

 Score =  166 bits (421), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++ ++    +   R  + L+ +  A+ +GLT   +S +E+ + +P  STL K+     
Sbjct: 1   MDEKIISV--NIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALE 58

Query: 61  LSLSEFFSE--PEKPDEPQVVINQDDLIEMGS----QGVSMKLVHNGNPNRTLAMIFETY 114
           + ++   S+      + P  +  +     +       G   +L+    P + +       
Sbjct: 59  VEITTLLSQGIDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIHA 118

Query: 115 QPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                      H+GEE   V++G++        YHL  G +   ++ IPH   +      
Sbjct: 119 P--FEAQRTYSHEGEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEKS 176

Query: 175 RIISAHT 181
           +++    
Sbjct: 177 KLLVVIY 183


>UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter
           RepID=C6E5F4_GEOSM
          Length = 199

 Score =  165 bits (419), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 9/186 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G+++  +RQ+Q L+ +  A+++GL+   +S IE D+V+P I+TL K+ K   + + 
Sbjct: 11  EMKLGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIH 70

Query: 65  EFFSEPEKPDEPQVVINQ--------DDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP 116
            FF E     +  +   +            E    G   K +  G   + +      ++ 
Sbjct: 71  YFFEEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQ 130

Query: 117 GTTTGE-RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
                     H+G E   +L+GE+      +   L AG S    +  PH + +      R
Sbjct: 131 RAWDNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRAR 190

Query: 176 IISAHT 181
            ++   
Sbjct: 191 AVAVLY 196


>UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna
           RepID=C2HHC8_PEPMA
          Length = 179

 Score =  165 bits (419), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 1/180 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +R + GL+Q   AE S LT   IS +E+D  SP++ +L  LL   G  ++ 
Sbjct: 1   MEIGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMAT 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF +     E     +     E  S   ++  +   +   T+  +  T      T E   
Sbjct: 61  FFMDKPSVKE-IFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYNP 119

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            +GEE G VLEG   + ++ + Y L  G  +           N    IC++I   +P  F
Sbjct: 120 FEGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPPNF 179


>UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Q4A0R4_STAS1
          Length = 181

 Score =  165 bits (419), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      K +++ R++  LS  + A  +G++ + +S IE+ + +P I+TL K+     
Sbjct: 1   MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +SLS+  S     ++    I++ D+I +  + VS+      + N+   M     QPG   
Sbjct: 61  ISLSQLTS---TSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKM 117

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                H G EE   V +G + + ++G+ Y +   Q++  N+ +PHS+ N    I  + S 
Sbjct: 118 HSDPHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTST 177

Query: 180 HT 181
             
Sbjct: 178 MY 179


>UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas
           aeruginosa group RepID=A4XQJ4_PSEMY
          Length = 188

 Score =  165 bits (419), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 2/179 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+RL   R+  G +  + A  +GLT S +S  E++    ++S+L  + K   + L+  
Sbjct: 5   RIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVL 64

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F +P +P      +N+     +G Q ++ + + +  P  ++  +      G  + E I H
Sbjct: 65  FDQPAQPQPD-SHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVGYQS-ELIAH 122

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +G E   VL G IV TI G+DY L  G S   + G  H  +N++     +++  T   F
Sbjct: 123 EGVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTTMALF 181


>UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae
           RepID=A6UHX0_SINMW
          Length = 193

 Score =  165 bits (419), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 5/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +  A G R+  +R ++ L   + A  +GL+ + +S IE+ ++ P + TL ++  V+G+ L
Sbjct: 11  QRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGL 70

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSM-----KLVHNGNPNRTLAMIFETYQPGT 118
             FF+  ++     +V  +  L      G        + +     +R +   +  +   +
Sbjct: 71  DHFFNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDS 130

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              E  +H   E   VL G +++ +NG++  L  G +   ++ +PHS+ +    I   I 
Sbjct: 131 PPSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAIV 190

Query: 179 AHT 181
             +
Sbjct: 191 VTS 193


>UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12
           Tax=Bacteria RepID=Q1AT52_RUBXD
          Length = 220

 Score =  165 bits (418), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 5/188 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +     G  + + R ++GL+    +  + ++ S +S IE  + SP++ T+ +L +  G++
Sbjct: 23  NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPG 117
           LS  FS  + P +   ++     +E+      +G +  L+     P +       T +  
Sbjct: 83  LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIKNK 142

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           + T    +H G E   +LEG++        Y L  G +   +  IPH          R +
Sbjct: 143 SETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPHGPEQLIDVPIRFL 202

Query: 178 SAHTPTTF 185
           +      F
Sbjct: 203 AIINYNVF 210


>UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5EUL8_9FIRM
          Length = 186

 Score =  165 bits (418), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 2/179 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  L  G+ +  +R+ + L+   AA  +G++ S ++ IE+  V+P IS L K+   Y +S
Sbjct: 4   NINLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS 63

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            +    E    D   +       I           V   +  +         +PG     
Sbjct: 64  FTSLV-ETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCLKA 122

Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           R    G EE  T+  G+ V+   GQ++ L  G S        H + N   G   +    
Sbjct: 123 RPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMVI 181


>UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH
          Length = 230

 Score =  165 bits (418), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 3/187 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      +RL  +R + G S   AA  +G++ + +  IE+ + SP ++TL K+   + 
Sbjct: 42  MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101

Query: 61  LSLSEFFSE-PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           +S S F    P +  E           +   +G+ +  +          +   T  PG  
Sbjct: 102 VSFSSFIEPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGYQ 161

Query: 120 TGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII- 177
                   G  E   V+ G + + + G+   L  G++       PH + N          
Sbjct: 162 RESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPAIFHN 221

Query: 178 SAHTPTT 184
             H P +
Sbjct: 222 LIHYPVS 228


>UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3
           Tax=Burkholderia RepID=Q13H28_BURXL
          Length = 204

 Score =  165 bits (418), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G RL  +R  QGLS    A  +G++   +S +E++K +P++  L++L +   + L+  
Sbjct: 18  DVGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTAL 77

Query: 67  FSEPEKPDEPQV-----VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             E +   +P          +  L E+G  G+  +L+   + +  L M+      G+ + 
Sbjct: 78  LEEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSP-HGDHDLQMMIIMLPAGSGSE 136

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E +   GE+ G VLEG +VL +  +   L AG S+   + +PHS  N S    R++    
Sbjct: 137 EVLVGIGEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMN 196

Query: 182 --PTT 184
             P  
Sbjct: 197 TQPPV 201


>UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales
           RepID=A8I9H1_AZOC5
          Length = 216

 Score =  165 bits (418), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 2/176 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  L ++RQ++G++  R A  S LT   +S +E+   +P+I+ L ++    G+++++ 
Sbjct: 27  RLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQL 86

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET--YQPGTTTGERI 124
           F     P     +    D   +      +  +      + +     T  ++PG     R 
Sbjct: 87  FDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRW 146

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H GEE   V+ G + + +  +D  L  G S      I H   +      +++   
Sbjct: 147 AHGGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202


>UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria
           (class) RepID=A1RBM5_ARTAT
          Length = 206

 Score =  164 bits (417), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   LA G R+ + RQ +G +  + AE +G++   I  +EQ   +P++ TL ++    G+
Sbjct: 12  TTLSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGV 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L      P           +   +    QG    LV        + +   T  PG   G
Sbjct: 72  GLPALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHG 131

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179
                 G  E+  VL G + + ++G    L AG S      + HS++N      R  ++ 
Sbjct: 132 SEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAV 191

Query: 180 HTP 182
             P
Sbjct: 192 FGP 194


>UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LFU9_RALME
          Length = 212

 Score =  164 bits (417), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 4/179 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           +  +RL+E+R+  GL+    A+ + LT S +S +E+   SP I T+ KL    G+++ + 
Sbjct: 29  SIAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQL 88

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
            +   + +E   +   D +    S    G + + +    P++ +              + 
Sbjct: 89  ITRSSRANEILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIMVPPFTLEEDQP 148

Query: 124 I-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           +  H GEE+  V+ GE+ +  + +   + AG S   N  IPH   +      + +   +
Sbjct: 149 MASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVVS 207


>UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria
           RepID=B5EKJ2_ACIF5
          Length = 181

 Score =  164 bits (417), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 3/174 (1%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           K++ ++R+ +G S R  A  + ++ SA+S IE  + SP+I+TL+K+     + ++  F +
Sbjct: 6   KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65

Query: 70  PEKPDEPQV-VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI--KH 126
            E    P +                S++ +  G P + +  +    +PG   GE      
Sbjct: 66  GETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTSA 125

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           +GEE   V+ G      +G    L  G +   +  +PH++ N       ++   
Sbjct: 126 EGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179


>UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8D0X7_HALOH
          Length = 182

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 3/183 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M++     GK+L ++R  +G S     E++G++ S +  IE+ K +P + TL K+ +   
Sbjct: 1   MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S FF E E         +++ L+        +  +   N  +   +     +PG + 
Sbjct: 61  VPFS-FFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSY 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR-IIS 178
                 QG EE   V EG + LT+N ++Y     +         H + N S    +  + 
Sbjct: 120 KSEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKAYVL 179

Query: 179 AHT 181
              
Sbjct: 180 VCY 182


>UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC
           9817 RepID=C3WFC8_FUSMR
          Length = 187

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 4/188 (2%)

Query: 1   MSDEGLAPG--KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M ++ L  G  K++   R  + L+ +  +E  G+T S +S IE+D V+P+I+TL+ + K 
Sbjct: 1   MKNDILDLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKA 60

Query: 59  YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
             + L  FF E E  +E  V  N    I +         +   +   ++          +
Sbjct: 61  LDVPLFMFFKE-ENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYS 119

Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            T E    H GEE+  +L+G++ + I  ++Y L  G S  I     H + N      ++I
Sbjct: 120 FTEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVI 179

Query: 178 SAHTPTTF 185
            A  P +F
Sbjct: 180 FAINPPSF 187


>UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae
           RepID=B9JGR0_AGRRK
          Length = 272

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 3/179 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G++L  +R   G +  + A   G+T S +ST+E+     +  TL  L   YG ++S   
Sbjct: 96  IGRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLS 155

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
            E  +     +   +       + GV+++L+        +        PG T+    +H 
Sbjct: 156 GEEREDVPVLIRSGEWRAWPETTPGVTVQLLA--EGRTMMDCHRFVLAPGATSEGAYRHD 213

Query: 128 GEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           GEE   +L G + L ++  Q + L+ G S    +   HS+ N   G   ++  +TP TF
Sbjct: 214 GEEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPPTF 272


>UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA
          Length = 207

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 1/172 (0%)

Query: 10  KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSE 69
           + L  IR  +G S  + A   G++ + +S IEQ K  P IS L K+     +  SE   E
Sbjct: 29  ENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKE 88

Query: 70  PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG- 128
             +     +      ++   S+  + + +     NR         +PG          G 
Sbjct: 89  KNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGT 148

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            E   V+ G++ L +  +   L    S      + H +SN +     +    
Sbjct: 149 TENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200


>UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905
           RepID=A3IAI3_9BACI
          Length = 188

 Score =  164 bits (415), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 4/179 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GK+++ IR+++G+S +  + LS ++ S +S IE+   +P I+   ++ +    +LS 
Sbjct: 1   MEFGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSA 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
                E  +   +   +  +    S G    L+    P+R +  +     P + +G    
Sbjct: 61  LLDSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPA 120

Query: 126 HQG--EEIGTVLEGEIVLTINGQDY--HLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           H+   +E   V +G + + ++   Y   L  G S+       H F N +   C      
Sbjct: 121 HKSGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179


>UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JMT2_AGRRK
          Length = 200

 Score =  164 bits (415), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 5/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + +  GKR+  +R    ++ +  +  SG++ SAIS IE +++SP    + KL +  G+ +
Sbjct: 10  DEMDLGKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGVDI 69

Query: 64  SEFFSEP--EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119
           SE FS+P  + P   +    +     + ++    +++      + +  +  T +      
Sbjct: 70  SELFSDPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEIRD 129

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G+ I H GEEI  VL G + L     +   L  G     ++ + H+      G   +  
Sbjct: 130 FGKLIAHVGEEIVVVLSGRVELRTEFYEPLVLEEGDCAYFDSTMGHACLAAGDGDAELFW 189

Query: 179 AHT 181
             +
Sbjct: 190 VCS 192


>UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT
          Length = 201

 Score =  164 bits (415), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
            A G R+  +R+ +G +    A  +GL+ S +S +E+ + +  +  L ++    G +++ 
Sbjct: 20  RAIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIAR 79

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE--R 123
              E E P    V+ +   +I  G  G + ++V    P     M+  T  PG   GE   
Sbjct: 80  LV-EDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGP 138

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            +    E   VLEGE+ LT++G ++ L AG +   +    H + N  A  CR + A 
Sbjct: 139 HQADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAM 195


>UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TJX2_9PROT
          Length = 192

 Score =  163 bits (414), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 10/187 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +     G RL ++R+++G++    A  +GLT   +S IE  K+ P I+TL ++ +  G
Sbjct: 1   MEEL---IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIG 57

Query: 61  LSLSEFFSEPE-----KPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFET 113
             ++ FF   +           V  ++      G    G   + + +   ++ +     T
Sbjct: 58  CDMAYFFQSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFT 117

Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
           +          +HQGEE+  VL G +V  I G++  L AG S   ++ +PH   +  A  
Sbjct: 118 FPAELQGDTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQA 177

Query: 174 CRIISAH 180
             ++  H
Sbjct: 178 QALVIIH 184


>UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales
           RepID=Q1LDV8_RALME
          Length = 203

 Score =  163 bits (414), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 75/187 (40%), Gaps = 5/187 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           ++   A G  L  +RQ Q LS    +  +G++ S +S IE++  +P ++ L +L    G+
Sbjct: 15  AEGPPAVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGV 74

Query: 62  SLSEFFSE----PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
           SL++F ++    P+ P    V  +    ++       ++++   +          + QPG
Sbjct: 75  SLTDFLAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPG 134

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                     G +E  +VL G + +   G +  L  G +      + H+  N    +   
Sbjct: 135 GVLASEPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATA 194

Query: 177 ISAHTPT 183
           +      
Sbjct: 195 LLVVVHP 201


>UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia
           RepID=B9R695_9RHOB
          Length = 183

 Score =  163 bits (414), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 5/185 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D+     +RL  +R+ +GLS    AE SG++ + +S IE+   SP  + L +L   +G
Sbjct: 1   MNDQD--LAQRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--T 118
           +S+++ F       + ++  N+  +      G   + V         ++I  T   G   
Sbjct: 59  VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-I 177
           +         E    +L G + + +    + L  G         P+++  T +   R  +
Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178

Query: 178 SAHTP 182
           +  TP
Sbjct: 179 TVITP 183


>UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri
           RepID=A5N4Z4_CLOK5
          Length = 179

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++ E+R ++GL+ +  +E +GL+   +S  E+   + A+  L  +  V  + ++ 
Sbjct: 1   MNIGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINY 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT--GER 123
           FF + EK     ++ + D            K +     ++ L+       P       + 
Sbjct: 61  FFDDEEKE---LIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYPDI 117

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             HQGEE   VLEG + L I+   + L  G S    +   H++ N +  + + I+ H P+
Sbjct: 118 YAHQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITVHYPS 177

Query: 184 T 184
           +
Sbjct: 178 S 178


>UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria
           RepID=D2R569_9PLAN
          Length = 202

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           R+  +R+ +G +  + A LSG++ S +S IE+   +P +    ++ + +G++L +    P
Sbjct: 21  RVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGMTLGDLVDSP 80

Query: 71  EKPDEPQVVINQDDL--IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
           E P     VI  DD   +        ++ +   +  + +     T + G     +   +G
Sbjct: 81  EPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGKLESQPHFEG 140

Query: 129 -EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             E  TV +G + LT   +   L  G S      +PH   N   G   +   
Sbjct: 141 TREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFLV 192


>UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SGH2_9BACT
          Length = 196

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  +  G+R+ +IR ++GL+ +  A  +G + + IS IE + V P I+TL K+ KV  
Sbjct: 1   MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPG 117
           + ++ FF E     +  VV               G   + +        L ++  T +P 
Sbjct: 61  VKMTYFFEEEINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKPD 120

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
               +   H+G E   V+EG + + +      L AG S A N+ IPH+          ++
Sbjct: 121 KRDEKLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALVL 180

Query: 178 SAH 180
            AH
Sbjct: 181 CAH 183


>UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FWR1_9CLOT
          Length = 204

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 16/197 (8%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G ++  +R Q+ ++ +  +E + L+   +S +E+   S A  +L+K+  V  + L+
Sbjct: 2   NKNIGAKIKRLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLEKIADVLEVDLT 61

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
            FF +P++  +  +   + ++ E+         + +   ++ +        PGT   +  
Sbjct: 62  YFFMKPKEHKKTVIRSYEKEVFEITDGKYINYHLSSNLTDKIMFPKLIEILPGTAESDGF 121

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAIN---------------TGIPHSFSNT 169
            + GEE   VLEG + L +   +  L  G S   +                   HS  N 
Sbjct: 122 NYSGEEFIYVLEGILTLNMAESEVDLYPGDSIHYSYKNKVMLKNGEDSKIVNQNHSLLNK 181

Query: 170 SAGICRIISAHTP-TTF 185
           +  + ++I    P   F
Sbjct: 182 TNKVTKVIIVSVPNPYF 198


>UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2
          Length = 184

 Score =  163 bits (412), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 3/186 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+   +  G+++   R+  GL+ +R AEL+ +T S +S IE+   +P++ TL+ +     
Sbjct: 1   MN--NINVGQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALN 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQG-VSMKLVHNGNPNRTLAMIFETYQPGTT 119
           + L  FF E    +E  V  NQ   I     G VS +L+           +        +
Sbjct: 59  IPLFNFFLEDTSTEELVVRANQRKKITFPESGNVSYELLSPNLDGSLELALMNLLPQTAS 118

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           + E + H+GEEI  ++EG++ L +N +   L  G S  I     H + NTS     +I  
Sbjct: 119 SMEPVAHKGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFG 178

Query: 180 HTPTTF 185
            TP +F
Sbjct: 179 VTPPSF 184


>UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2
           Tax=Cronobacter RepID=C9Y503_CROTZ
          Length = 204

 Score =  163 bits (412), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 11/183 (6%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D      + L  +RQQ+  S  +AA+ +G++ + +  IE+++ SP ++TL K+   + + 
Sbjct: 30  DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            S F + P               +    Q + ++ +   +      M+  T  PG  +  
Sbjct: 90  FSVFITPPAPG---------ARTVFDAQQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDS 140

Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISAH 180
                G  E   V+EGE+ L  +G    L  G+        PH++ N +    R     H
Sbjct: 141 TPHENGVTEHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRFHSLIH 200

Query: 181 TPT 183
            P 
Sbjct: 201 YPA 203


>UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2
           Tax=Bacteria RepID=Q1AWJ9_RUBXD
          Length = 203

 Score =  162 bits (411), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D     G+R+  +R+++GL+    A  SG++ + IS +E+ +  P +    +L +  G+
Sbjct: 11  EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           SLSE   E E+     V   +   +     G   +L+  G   R +  I      G+T+G
Sbjct: 71  SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130

Query: 122 ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           E   H+   EE   V  G ++  + G ++ L  G +      +PH F N   G C     
Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190

Query: 180 H 180
            
Sbjct: 191 I 191


>UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54
           Tax=Enterobacteriaceae RepID=YDCN_ECOLI
          Length = 178

 Score =  162 bits (411), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 10/184 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +        L ++RQQ+G S  R AE +G++ + +  IE+++ SP ++TL K+     
Sbjct: 1   MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S F S P+               +   Q + +  +   +P             G  +
Sbjct: 61  VPFSTFISPPQSATPSV--------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178
                 +G  E   V++G++ L ++G+   L  G+       + H + N           
Sbjct: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172

Query: 179 AHTP 182
            H P
Sbjct: 173 IHYP 176


>UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SLI4_HAHCH
          Length = 192

 Score =  162 bits (411), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 1   MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M D  L    GKR+ ++R+ + L+  + A+ S ++ S +S IE+ + +P  +TL  L + 
Sbjct: 1   MKDTDLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRA 60

Query: 59  YGLSLSEFFSEPE---KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
            G+  SE   E E         ++  Q   I+    G  + ++   +   ++       +
Sbjct: 61  MGIEWSELVDESEGVSHSPIEHIIAAQTPKIDNPQGGYHLSILSPPHLVGSIEWYELRMR 120

Query: 116 PGTTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           P      +   QG  E  TVL G++ +    Q   L  G +   +  + H+  N      
Sbjct: 121 PQGKLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDT 180

Query: 175 RIISAH 180
             +   
Sbjct: 181 IALLVV 186


>UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5
           RepID=B6JAK2_OLICO
          Length = 202

 Score =  162 bits (411), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 3/177 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G+R+   RQQ+G+S  + A  +GLT S +S +E+    P+I+T  K+ +V+G ++ + 
Sbjct: 22  SLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTVGQL 81

Query: 67  FSEPEKPDEPQVVINQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
             E        +V   +    L      G +++ + +  P++ +            +  R
Sbjct: 82  LGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMRPPHKFHSDRR 141

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             H GEE+  VL G+I +    +   L AG +   N+  PH   +        +   
Sbjct: 142 FTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVVV 198


>UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia
           ubonensis Bu RepID=UPI00016A6284
          Length = 177

 Score =  162 bits (411), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 1/175 (0%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+  +R+Q  L+    A  +G++   +S IE+ +  P+I++L  + +  G+++  F 
Sbjct: 1   MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQ 127
             P                   +   ++  V +      L  +      G    E   H 
Sbjct: 61  GAP-GDAPTACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHT 119

Query: 128 GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           GEE   V+ GEI LT++ +   L AG++    + + H++SN +     I+    P
Sbjct: 120 GEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWVGAP 174


>UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR68_RHOBA
          Length = 233

 Score =  162 bits (411), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 3/175 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +   +RL ++R  +G++    A+ SG T S +S +E  +++P++  L  L    G+S S 
Sbjct: 53  VELAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSS 112

Query: 66  FFSEPEKPDEPQVVINQDDLI--EMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
                +   +   V + +           +    + +   +RT+         G    E 
Sbjct: 113 LLEGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGEER-EP 171

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             H+GEE  TVL+G +      Q++ L  G S   ++ + H  +N  A    +I 
Sbjct: 172 RTHEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVIC 226


>UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHE5_SYNFM
          Length = 204

 Score =  162 bits (411), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 8/182 (4%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G ++ E+RQ+  L+ +  A  +GL+   +S IE +KV P ++TL +L +   ++L  F
Sbjct: 17  NIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHF 76

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQ-------GVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           F E  + D   +   ++ +                   +     N+++      +     
Sbjct: 77  FQESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFPTQEK 136

Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                  H+GEE   V+EG++      +   L  G S  I + + HSF        R ++
Sbjct: 137 EEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALA 196

Query: 179 AH 180
             
Sbjct: 197 VV 198


>UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1
           Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB
          Length = 204

 Score =  162 bits (410), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D   A G+   ++RQ QG+S R  +E SG++   IS IE+D  +P++  L  + +   +
Sbjct: 10  EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69

Query: 62  SLSEFFSEP-------EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114
            +   F +        +   +P  +        +    +  +L+ +G  N  L ++  T 
Sbjct: 70  PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSG-GNHNLQIMILTI 128

Query: 115 QPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
           +PG T+G   + +  E+ G VLEGE++L+++ ++ HL  G S+  ++  PH+F N     
Sbjct: 129 EPGGTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRP 188

Query: 174 CRIISAHTPTTF 185
            RI+       F
Sbjct: 189 ARILWVIGAVQF 200


>UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium
           RepID=C7IC10_9CLOT
          Length = 184

 Score =  162 bits (410), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 3/184 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      + L  +R+++ LS    A+LSG++ S +  IE+ +V+P +ST+ K+     
Sbjct: 1   MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S S+  +  E   E   + N   L+E     V +    + +  R   +    +Q     
Sbjct: 61  VSFSQLVNHTETNVEIVDIKNLKPLLEDE-GRVRIYPTFSFDSTRRFEIYSLEFQTNGYL 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178
                 QG +E  TV  GE+ +T+  + + +  G++       PHS+ NT    C + + 
Sbjct: 120 STEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANCLLDMV 179

Query: 179 AHTP 182
              P
Sbjct: 180 IFYP 183


>UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes
           RepID=B0MBC4_9FIRM
          Length = 180

 Score =  162 bits (410), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 2/180 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L   K +  +R++Q LS    ++LSG++ S ++ IE+   +P ISTL K+     +   
Sbjct: 2   NLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPFD 61

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
                P+ P E     + + L+E   +  +   +   + +R  A+ +   +P +      
Sbjct: 62  ALTVRPKTPYEIIKTADIEPLLEDSGRVKNY-PLFPDDADRKFAVYYLKLEPYSRWESEA 120

Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
             +G  E  TV  G++ +  +   + L   +S        HS+ NT      +       
Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVLYMILFYP 180


>UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB
          Length = 229

 Score =  162 bits (410), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 3/182 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + L  G RL   R+ Q ++    ++ + ++ S +S IE DK  P++ +L  +    G+ +
Sbjct: 24  DQLRIGPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDI 83

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETYQPGTTTG 121
           + F +  E PDE  +       + + +  V +++  +   + +  L        P  + G
Sbjct: 84  TTFLTL-EIPDEFLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRASGG 142

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             + H+GEE+  V++GE+ +T+N   +    G S    +   H++ N S     +I  +T
Sbjct: 143 PSMSHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINT 202

Query: 182 PT 183
           P 
Sbjct: 203 PP 204


>UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria
           RepID=Q3SUW3_NITWN
          Length = 259

 Score =  161 bits (409), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 2/181 (1%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +  +  GK L  IR +QGLS  R A+ SG++ + +  IE  K +P I  L K+     + 
Sbjct: 73  ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQP-GTTTG 121
            +   +  +      +  +   L+       + + +   +  R          P      
Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192

Query: 122 ERIKHQGEEIGTVLEGEIVLTING-QDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           E       E   V +G + + +   +   L  G +      +PH++ N       +    
Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252

Query: 181 T 181
           T
Sbjct: 253 T 253


>UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium
           RepID=Q8RFX4_FUSNN
          Length = 199

 Score =  161 bits (409), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 4/187 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+ E +  G  +  IR+ + L  +  A   G++ S +S IE+   +P+++T++ + +V  
Sbjct: 15  MNKE-INVGITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLE 73

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY--QPGT 118
           + L +FF + EK      ++ +DD   + ++ V+ +L+        +  +  T   +   
Sbjct: 74  VPLFKFFMDLEKEKYEFHLLKKDDRKIISTEYVTYELLSPDVETN-IECMQMTLIGKNAE 132

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           T+ + + H+GEEI  +L G++ LTI      L +G S  I + +PH ++N       +I 
Sbjct: 133 TSVKPMAHKGEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIF 192

Query: 179 AHTPTTF 185
           + +P  F
Sbjct: 193 SVSPPEF 199


>UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO
          Length = 190

 Score =  161 bits (409), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 5/188 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + DE    G  L  +R+ +GL+    AE  G +   +S +E+DK  P+IS L+ + KV  
Sbjct: 5   LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64

Query: 61  LSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
           +S+S  F             V       +   ++G+  +L+     +    M+  T++PG
Sbjct: 65  VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELLSPDLTD-DFEMVHSTFEPG 123

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +   E +    +E+  +L G + + IN   + +  G S+ I       +SN  A     I
Sbjct: 124 SRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIRGE-AFRWSNPYAEPAVAI 182

Query: 178 SAHTPTTF 185
               P  +
Sbjct: 183 WVIAPPVY 190


>UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA
          Length = 224

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 1/172 (0%)

Query: 11  RLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEP 70
           RL  +R+Q+G +    AE +GLT S +S +E+    P+I+   KL K   + + + FSE 
Sbjct: 43  RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102

Query: 71  -EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGE 129
            ++         Q   +   +   + + +  G   + L            +    +H+GE
Sbjct: 103 RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVSSAFREHEGE 162

Query: 130 EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           E+  V +G + +    +   L  G S   N  IPH   +       ++   +
Sbjct: 163 EMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVVS 214


>UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria
           RepID=B1M0W6_METRJ
          Length = 186

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            +  G RL  +R + GLSQR  A+ +G+T+SAIS IE ++V+P++  L+++L    + ++
Sbjct: 2   SIDVGARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGMA 61

Query: 65  EFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           EFF+   +P+       ++            +S + V +    R L ++ E Y+PG  TG
Sbjct: 62  EFFALEPEPERKAFFAAEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADTG 121

Query: 122 ERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                H+GEE G VL G + +T++ +   L  G +Y+ ++  PH F       C ++SA 
Sbjct: 122 RVPLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSAC 181

Query: 181 TPTTF 185
           TP +F
Sbjct: 182 TPPSF 186


>UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD
          Length = 205

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 8/186 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M       G+RL   R+Q+GLS    AE +GL+   +S +E+D VSP+I +L  +    G
Sbjct: 1   MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM--GSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           L++++ F+       P VV    D        +GV   L+   +  R   +       G+
Sbjct: 61  LAVADVFAVA-----PVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGS 115

Query: 119 TTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
              E      + E+  V+ G I L    + Y L AG S        H++ N   G  R++
Sbjct: 116 GGDELYHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVL 175

Query: 178 SAHTPT 183
               P 
Sbjct: 176 WVLAPA 181


>UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145
           RepID=A3WK19_9GAMM
          Length = 174

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 11/181 (6%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      +RL ++R+ +G S    AE +G++ + +  IE+ + SP ++TL KL   + 
Sbjct: 1   MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +SLS   ++ ++P             +   + + ++ +   +P     +       G  +
Sbjct: 61  VSLSWLLNDEQQPMT----------FDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQS 110

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 +G  E+  V  G + + +      + AG++Y  +   PHS+ N  +G    ++ 
Sbjct: 111 HSDAHRRGTFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAV 170

Query: 180 H 180
            
Sbjct: 171 I 171


>UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota
           RepID=Q468H3_METBF
          Length = 192

 Score =  161 bits (407), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 10/192 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS+E    G ++ ++R+ + ++    AE S  +   I  +E   + P+++ L K+ +  G
Sbjct: 1   MSEEN-RVGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59

Query: 61  LSLSEFFSEPEKPDEPQVVIN--------QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE 112
           + L  F  +  +     V                +     +    + +   +R +     
Sbjct: 60  VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119

Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
              P      ++  H+GEE   +L GEI +      + L AG S   ++ IPH       
Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179

Query: 172 GICRIISAHTPT 183
              +I++     
Sbjct: 180 EDAKILAVVYAP 191


>UniRef50_Q14Q08 Conserved hypothetical transcriptional regulator transcription
           regulator protein n=1 Tax=Spiroplasma citri
           RepID=Q14Q08_SPICI
          Length = 177

 Score =  160 bits (406), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 3/180 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +RQ+  L+    A    LT   IS +E+D  SP+I TL+ +L+V G +L++
Sbjct: 1   MLLGEKIKLLRQKNNLTIEELANRCELTKGFISQLERDISSPSIETLESILEVLGTNLAD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF + +     + V   ++  ++      ++ +        L  I    +P   +   + 
Sbjct: 61  FFKQEKN---RKFVYAAEEHYKVEQNNYRIEWLVPNAQVNELEPILIQIKPQGESERILP 117

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
            +G+  G VL+G +++    +        S+ +     H   N +  I  ++   TP  F
Sbjct: 118 FEGQIFGYVLKGTVLVYSGQKVQKAHTRDSFYLYGNNQHYLKNETNEIVEVLWISTPPIF 177


>UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium
           RepID=B1M8P3_METRJ
          Length = 202

 Score =  160 bits (405), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   +   + +   R++QGLS    A  SG++ S IS IE+ +  P+   L +L +  G+
Sbjct: 16  TSPQIHIAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGV 75

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           + S   +   + +   +  ++  ++   + G   + +    P R +  +  T  PG +TG
Sbjct: 76  TFSRLMAPATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTG 135

Query: 122 ERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           E   H     E   VL G +   I  +   +  G S        H+F+N     C     
Sbjct: 136 EFTAHRRGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLV 195

Query: 180 HTP 182
             P
Sbjct: 196 IDP 198


>UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium
           sp. ORS278 RepID=A4YW73_BRASO
          Length = 184

 Score =  160 bits (405), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 4/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G RL   R  +G+  R  A++ G   S IS IE  KV P++  L K++      ++ 
Sbjct: 1   MNIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMAS 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           FF       +          + +    G +GV  + +        L        PG    
Sbjct: 61  FFGLRVDDYKQVQKPEDRMKVYVDALRGGKGVVYERLVPVAAGNLLEANIHVVAPGGEKI 120

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           + I HQGE +G ++ G I LTI+   Y + AG S+     + +S+ N      RI+  +T
Sbjct: 121 DLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWVNT 180

Query: 182 P 182
           P
Sbjct: 181 P 181


>UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter
           usitatus Ellin6076 RepID=Q026G4_SOLUE
          Length = 225

 Score =  160 bits (405), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 6/183 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G++L ++R ++ ++       +GL+ S +S +E  K+ P ++TL ++  V+ + L  F
Sbjct: 41  DIGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHF 100

Query: 67  FSEPEKPDEPQVVINQD-----DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           F          +V   +     +  +        + +     ++ L      + P     
Sbjct: 101 FGNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRAAD 160

Query: 122 -ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            +   H+G E+  VLEG + +   G+D+ L  G S   ++  PHS+   +    R I   
Sbjct: 161 VQEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIVVT 220

Query: 181 TPT 183
           TP 
Sbjct: 221 TPP 223


>UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Rhodobacteraceae RepID=A6DW64_9RHOB
          Length = 209

 Score =  160 bits (405), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 2/174 (1%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            LA G+R+ + RQ   ++ +  +   G++ S +S IE+D   P + TL ++     +S+ 
Sbjct: 11  PLALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSID 70

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
            F + P + D             +    +  + +    P   L        PG  + E +
Sbjct: 71  HFIATPRQAD-SVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYES-ETV 128

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +H GEE+  VL+GE++  +NGQ + L  G S       PHS+SN S    R++ 
Sbjct: 129 QHSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLLW 182


>UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium
           RepID=Q18AY1_CLOD6
          Length = 183

 Score =  159 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++    G+ L  +RQ+ G+S  +A++++G++ + +  IE+ + SP +STL K+   + 
Sbjct: 1   MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           ++ +   +E     E  +   + + I      + +  ++  +P R   +     +   T 
Sbjct: 61  INFTTLLNENTNTYE-VIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTH 119

Query: 121 -GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                 H  EE   V+EG++ L ++G+ Y L +G S   +  + H + N + G    
Sbjct: 120 VSSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIF 176


>UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae
           RepID=B8FLW0_DESAA
          Length = 184

 Score =  159 bits (404), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            ++ G+R+ ++R+ + +     A  +GL    +  IE  +  P++ +L ++ +   +  S
Sbjct: 9   NISTGQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVD-S 67

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER- 123
            FF E E     + +          +   +   +  G  ++ +        P        
Sbjct: 68  AFFLEKEVKTTKKGLAKA---YSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVS 124

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            +H+GEE   VL G++ +T+      L  G S   N+G+ H   N       ++      
Sbjct: 125 YQHEGEEFVYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184


>UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER
          Length = 196

 Score =  159 bits (403), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 3/176 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
               L   R++ GL+    AE +GLT S +S +E+   +P+I+   K+ +V    + + F
Sbjct: 1   MAAFLRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLF 60

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVS--MKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           S+  + +   +V  +D +I+  +   S     +      + +              + + 
Sbjct: 61  SDSMEGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPFVVH-PASVMGPKFMD 119

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           H GEE   V  G +   I GQ  HL AG S   +   PH   + SA    ++    
Sbjct: 120 HTGEEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVVY 175


>UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA
          Length = 180

 Score =  159 bits (403), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 6/171 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +R+Q+GL+  + A+ +GLT S +S IE+ + +P+I+   K+ +   + +   FS+  
Sbjct: 5   LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GERIKHQG 128
             +        D    +G Q     ++ +    +T++        G      G   +H G
Sbjct: 65  AHETITADRAHDR---LGPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTG 121

Query: 129 EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           +E   V  G + L    Q   L  G S   +  + H           ++  
Sbjct: 122 QEFVFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172


>UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D6V3_PAESJ
          Length = 182

 Score =  159 bits (402), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G  +  IR+++ ++  +  E +GL+   +S +E +K SP+I+TL+ +     + L+ 
Sbjct: 1   MDIGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAY 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
              +  K ++ Q+V      I           V + +  + + M+     PG +TGE   
Sbjct: 61  LLLD--KKEKMQIVRKDGRRITTSGPDKLK--VSHLSSTKNVHMMIVELPPGASTGENHA 116

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
           H+GEE+  V++G I +        L AG S++ N   PH+  N       ++ +  
Sbjct: 117 HEGEEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVY 172


>UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis
           RepID=C0X8B7_ENTFA
          Length = 183

 Score =  159 bits (402), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 65/180 (36%), Gaps = 1/180 (0%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           +     G  L +IRQ++ L+    A ++G++   +S IE+   +P I+T+ K+     + 
Sbjct: 2   EINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVP 61

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            +    +    + P V   +            +   ++ N  R   +       G     
Sbjct: 62  YTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKYQA 121

Query: 123 RIKH-QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
                +  E   V++G + L +  Q Y L    +   +    H++ N      + +  + 
Sbjct: 122 VGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAVVINY 181


>UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Acinetobacter
           RepID=B2HYY3_ACIBC
          Length = 197

 Score =  159 bits (402), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 5/186 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D  +    R+ E+R  +G +    A    ++ SAIS IE+ + SP    L+KL     
Sbjct: 1   MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE 60

Query: 61  LSLSEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           + L++ F+        +P +  N+         G   + V   N      ++   + P +
Sbjct: 61  VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS 120

Query: 119 T---TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
                        ++   V+EG+I + +    Y L  G   A+    P  +SN SA + R
Sbjct: 121 RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR 180

Query: 176 IISAHT 181
            I   +
Sbjct: 181 YILVVS 186


>UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella
           bronchiseptica RepID=Q7WPD8_BORBR
          Length = 201

 Score =  159 bits (402), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +D+    G+ +  IR+++ +S +  A  SG+    +S IE+D  +P++ TL ++ +   +
Sbjct: 3   ADDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDV 62

Query: 62  SLSEFFSEPEKPDEP----------QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIF 111
            LS  F   ++                      +++ G+  ++ +++      + L  + 
Sbjct: 63  PLSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPP-AGQRLQFMV 121

Query: 112 ETYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
              QPG T+G     +  E+ G VL+G   L ++GQ   L  G S+  +   PH F N  
Sbjct: 122 LNIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPY 181

Query: 171 AGICRIISAH 180
                I+   
Sbjct: 182 DEPASILWII 191


>UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales
           bacterium Y4I RepID=B6BB48_9RHOB
          Length = 218

 Score =  158 bits (401), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 4/182 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E    G +L  +RQ + +   +  E +GL+ + +S IE+ +V P ++TL ++  V+G+ L
Sbjct: 27  EAYRIGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGL 86

Query: 64  SEFFSEPEKPDEPQVVINQDDL----IEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
             FF   E     ++V  +D L       G      + +               +    +
Sbjct: 87  DHFFGPGEDAPVLEIVRQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEFSGNGS 146

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 H G E+  V+EG + L I+G+   L  G S   + G  HS+       CR +  
Sbjct: 147 ESMPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALVV 206

Query: 180 HT 181
            +
Sbjct: 207 VS 208


>UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31672
          Length = 196

 Score =  158 bits (401), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 5/180 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G R+  +R+   LS R  AE SG++   +S +E+ + SP +    ++     L LS+ 
Sbjct: 11  AIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQL 70

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT---GER 123
               E+     V + +         G   +++    P +   +      PGT T   G+ 
Sbjct: 71  LRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDP 130

Query: 124 IKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             H+    E   +  G +VL  +G  Y L AG +   +  +PH F N       +++  +
Sbjct: 131 PVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVVS 190


>UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci
           RepID=C1XM81_MEIRU
          Length = 186

 Score =  158 bits (401), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 4/182 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
              +  G RL   R  +GL+  + A+ SGL  S IS +E++  + ++++L K+     + 
Sbjct: 7   SPSVPIGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQ 66

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
               F   + P    V   +      G  GV   ++  G     + +  E    G    E
Sbjct: 67  PGSLF---DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKE 123

Query: 123 RIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
                 + ++ TVLEG +  TI    Y L  G S   +   PH++ N       ++   +
Sbjct: 124 PYSFPSDTDVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVLS 183

Query: 182 PT 183
           P 
Sbjct: 184 PA 185


>UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D5R2_PAESJ
          Length = 187

 Score =  158 bits (401), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 4/179 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKR+  IR++Q  +Q   +   G T S +S IE     PA++TL K+    G+ +S+
Sbjct: 1   MELGKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSD 60

Query: 66  FFSEPEKPDEPQVVIN---QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
                 K     +  +   + +      +G S     +G  ++ +       + G     
Sbjct: 61  LLEPSPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEVKSH 120

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              H+G+E   VL G++   +   +Y + AG     N+   H     S    + ++  T
Sbjct: 121 VFSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNSLEEHLVIPVSEQ-VKYLAIFT 178


>UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria
           RepID=C3MCD7_RHISN
          Length = 244

 Score =  158 bits (400), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 6/187 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
             +A G  +   R++ G++    A  + ++   +S IE    SP+++TLQ L +  G+ +
Sbjct: 53  LEVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPI 112

Query: 64  SEFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGNPNRT---LAMIFETYQPG 117
           + FF   E+      V   + +         G    L+ +   N     +     T    
Sbjct: 113 TSFFRGFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +      +H G E   +LEGE+V       Y +  G S   +   PH     +    R +
Sbjct: 173 SDVFPTFQHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRYL 232

Query: 178 SAHTPTT 184
           S  +  +
Sbjct: 233 SIISYPS 239


>UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine
           actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN
          Length = 169

 Score =  158 bits (400), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 4/166 (2%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           ++  + A  S L+ + +S IE+ K +P+ +TL +L     + +  FF    +P  P V  
Sbjct: 1   MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60

Query: 81  NQDD---LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-RIKHQGEEIGTVLE 136
                   +   S G ++  +     N  +   +    PG  T      H GEE G V+ 
Sbjct: 61  GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120

Query: 137 GEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           G+I + ++G+ + L AG S    +  PH + N     C  I   TP
Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTP 166


>UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae
           RepID=A6UEQ1_SINMW
          Length = 209

 Score =  158 bits (400), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 5/181 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
            +  + L ++RQ+ GL+    A    L  S +S IE  ++SP   T+  L +  G  ++E
Sbjct: 18  RSIAETLRQLRQENGLTLNELARRCALAPSTLSKIENGQMSPTYDTILSLAEGLGADVAE 77

Query: 66  FFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTTG 121
            F+  +       + +    D +   +     +++     ++    +    +    +  G
Sbjct: 78  LFARRQTTTVSGRRTINRAGDGVAHNTDQYDYQMLCTELAHKQFVPLKAIIKANSISRFG 137

Query: 122 ERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             + H GEE   VL GEI L         L  G S   ++ + H+    S     ++   
Sbjct: 138 GMLSHSGEEFVYVLSGEIELHTQFYAPTRLHTGDSCYFDSTMGHALLKASEEDAEVLWVC 197

Query: 181 T 181
           +
Sbjct: 198 S 198


>UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseudomonas
           RepID=Q880R5_PSESM
          Length = 212

 Score =  158 bits (400), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 1/178 (0%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
              + L  +R ++ LS    A L+G++ + ++ IE  +  P+I  L K+ K   +S++ F
Sbjct: 31  RVARNLQRLRSKRYLSMDALARLTGVSRAMLAQIESGRSVPSIKVLCKIAKGLKVSIAAF 90

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
             +        +       +   S     + +   +  R                     
Sbjct: 91  LEDRAFEGVELLPAQHSKRLVSASGVFVSRALFPFDMARQSEFYEIRLGALGEEISNGHG 150

Query: 127 QG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            G +E   V +G + +++N + Y L  G S       PH + N +          T  
Sbjct: 151 PGVQENLVVAQGVLEVSVNEERYLLSTGDSILFYADQPHRYRNPADSEALAFLVMTYP 208


>UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus
           HTCC2516 RepID=Q2CEW8_9RHOB
          Length = 202

 Score =  158 bits (400), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 3/186 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
                  G  L   R+ QG++ R  AE +GL+   IS  E+D   P++S+L+K+ +V G+
Sbjct: 10  QSTDSKIGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGV 69

Query: 62  SLSEFFSE--PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           SL +   E  P      +            S  ++ + +    P  TL+ +     PG  
Sbjct: 70  SLQDILPETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHR 129

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
           + E   H GEEI  VLEG + + ++G+   L  G S   ++  PH+  N +  I  I+  
Sbjct: 130 S-ELQSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILHV 188

Query: 180 HTPTTF 185
            T   F
Sbjct: 189 CTIDVF 194


>UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2150 RepID=A3JV98_9RHOB
          Length = 195

 Score =  158 bits (399), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 3/179 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E    G+++  +R ++ L   +    + L+   +S IE+ +V P + TL ++  V+G+ L
Sbjct: 11  ESYRIGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGL 70

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQ---GVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
             FF E + P    V   +   +    +       + +     +R +      + P    
Sbjct: 71  EHFFEEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA 130

Query: 121 GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
            E  +H+G E+  V+ G + + I+   + L A  S   +   PHS+   S      +  
Sbjct: 131 SEPHEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189


>UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria
           RepID=A6UEP3_SINMW
          Length = 234

 Score =  158 bits (399), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
             +A G  +   R++ G++    A  + ++   +S IE    SP+++TLQ L +  G+ +
Sbjct: 43  LEVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPI 102

Query: 64  SEFFSEPEKPDEPQVVINQDDL---IEMGSQGVSMKLVHNGN---PNRTLAMIFETYQPG 117
           + FF   E+      V   + +         G    L+ +         +     T    
Sbjct: 103 TAFFRRFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           +      +H G E   +LEGE+V       Y +  G S   +   PH     +    R +
Sbjct: 163 SDIFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRYL 222

Query: 178 SAHTPT 183
           S  +  
Sbjct: 223 SIISYP 228


>UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TMW2_9PROT
          Length = 218

 Score =  157 bits (398), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 4/182 (2%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
              G  + + R  + ++    A   GL+ S +S +E+     ++  L ++    G ++ +
Sbjct: 9   QRIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALGGTIHD 68

Query: 66  FFSEPE----KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
               P+              +     + + G     V  G   R +           +  
Sbjct: 69  LIGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSAAGSAD 128

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
            R  H GEEI  VLEG +   +  +   L  G +  + + IPH+         R++    
Sbjct: 129 TRFAHPGEEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPARVLMMTH 188

Query: 182 PT 183
             
Sbjct: 189 HP 190


>UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO
          Length = 207

 Score =  157 bits (398), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 8/192 (4%)

Query: 1   MSDEGLAPG-------KRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQ 53
           M+D G   G       +++ ++R  +G S    A  SG++   +  IE  + +P+I TL 
Sbjct: 1   MTDTGGRVGAVTSAVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLC 60

Query: 54  KLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFET 113
           ++   +G+S++      E+        ++  ++  G  G   +L+        + +    
Sbjct: 61  RVADAFGVSIARLLEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWR 120

Query: 114 YQPGTTTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
            +PG         H   EI  VL+G   +T++G D+ + AG++   +    H +     G
Sbjct: 121 MEPGEALRSPDHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDG 180

Query: 173 ICRIISAHTPTT 184
             R++      +
Sbjct: 181 PVRLMMVVVTPS 192


>UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces
           RepID=B5HZF0_9ACTO
          Length = 201

 Score =  157 bits (398), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 1/181 (0%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
              +  + +   R ++G +    A  +G++   +  IEQ + +P++ T+ K+    G+S+
Sbjct: 18  LTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALGISI 77

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           +      + P    V   Q   +     G   +L+        L M      PG ++   
Sbjct: 78  TTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESSPSD 137

Query: 124 IKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
               G  E+  V+ GE+ LT++G ++ + AG S +     PH++ N  A    ++ A + 
Sbjct: 138 PHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEMVMAVSV 197

Query: 183 T 183
            
Sbjct: 198 P 198


>UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria
           RepID=Q12BT0_POLSJ
          Length = 207

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 3/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +       +R+ ++R  + LS    A   G++ S IS IE+ + SP    L+KL     +
Sbjct: 14  ASLNDRIAQRVRDLRAARSLSLDALATHCGVSRSMISLIERGESSPTAVLLEKLATGLNV 73

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L+  F  P+   +P   +           G   + V        + ++  ++       
Sbjct: 74  PLASLFEAPQPTKDPVARLADQPSWRDPHSGYVRRNVSPSGVASPIQIVEVSFPAKARVA 133

Query: 122 -ERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            E    +    +   VLEG I +T+    + L  G   A+    P S+ N +    R   
Sbjct: 134 YETGAREAQIHQQVWVLEGSIEVTVGDDQHRLGTGDCLALVLDRPVSYHNPTRKTARYAV 193

Query: 179 AHT 181
             T
Sbjct: 194 VIT 196


>UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Burkholderia
           RepID=Q13RR3_BURXL
          Length = 276

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 12/189 (6%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+R+   RQ Q L+   A+ L G++ S +S +E   +SP    LQK++    + + E 
Sbjct: 79  DLGRRVRAARQAQDLTLETASRLCGVSRSTLSKVENGLMSPTFDVLQKIVLGLKIEIGEL 138

Query: 67  FSEPEKPDEPQVVI--NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTTGE 122
           F    K           +++      +G  M+L+     ++ +                +
Sbjct: 139 FGSTPKVSASGRRALTRKNEGQRHAYRGYQMELLATDLAHKAMLPFRIRISAHTLDAFDD 198

Query: 123 RIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA-- 179
             +H+GEE   V+ G + L        HL AG S   ++   H+  +TS     ++    
Sbjct: 199 WGRHEGEEFLYVISGSVCLYSELYAPTHLNAGDSLYFDSRTGHAAVSTSEEDAEVLWMAT 258

Query: 180 -----HTPT 183
                HTP 
Sbjct: 259 SADIPHTPP 267


>UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH7_9PLAN
          Length = 205

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 69/181 (38%), Gaps = 2/181 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            +      +R+ E+R+++G S    +   G++ S +S IE+ + +P ++   ++ + +G+
Sbjct: 21  DEISGQLSQRVRELRKERGWSLDSLSAACGVSRSMLSQIERGEANPTLAVTVRISQAFGI 80

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEM-GSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +L E    P      +V+  +D            ++ +   +  + +             
Sbjct: 81  ALGELVEAPVSTSAIEVIRAEDRTFHYRSDDECRIRTLSPLHLEKDVEFYEVQLHANGKL 140

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 +G  E  TV +G++ +        L  G S +    +PH+  N   G   +   
Sbjct: 141 QSAPHFRGTREFLTVEKGKVQVNSGEDTTQLGPGDSASYRVDVPHAIMNIGRGEAVLFLV 200

Query: 180 H 180
            
Sbjct: 201 V 201


>UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus
           JCSC5402 RepID=B9E9Z3_MACCJ
          Length = 167

 Score =  156 bits (396), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           ++ G+ + +IR+++ L+ ++ AEL+ L+   +S +E +K    ++T++ +     +  S+
Sbjct: 1   MSIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQ 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF E           +  D++    Q    + +   +       +    +PG T  E ++
Sbjct: 61  FFYE---------HASLMDVLNAKRQSFYYEQLA-YDKGSPFIPLKVKLKPGNTDLEYVQ 110

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           H G E    L+G + ++++  +  L  G+S   +   PH + N +  +   +  +
Sbjct: 111 HDGFEFVYCLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVIN 165


>UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria
           RepID=A1BAD5_PARDP
          Length = 213

 Score =  156 bits (396), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 11/193 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSD     G RL E+R    +SQR+ AE SG+ H  +S IE  + SP++++L+K+L   G
Sbjct: 22  MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79

Query: 61  LSLSEFFSEPEKPDEPQVVINQD------DLIEMGSQGVSMKLVHNGNPNR--TLAMIFE 112
           +++SEFF               +       L       V    +      R   L ++ E
Sbjct: 80  VTMSEFFEPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHE 139

Query: 113 TYQPGTTTGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
            Y+PG  TGE +  H G E G V+ GEI LT+  Q   L AG SY   +  PH F N S 
Sbjct: 140 RYEPGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVSD 199

Query: 172 GICRIISAHTPTT 184
               ++SA TP  
Sbjct: 200 REAVVVSACTPPY 212


>UniRef50_A9BI07 Transcriptional regulator, XRE family n=2 Tax=Thermotogaceae
           RepID=A9BI07_PETMO
          Length = 178

 Score =  156 bits (396), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 1/175 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+++  +R  + ++Q   A  S LT   IS +E+D  SP +  L+ +L+  G  L +
Sbjct: 1   MQIGEKIKSLRIMRNMTQEELATRSDLTRGFISQVERDLASPTVENLEMILRALGTDLKD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FFS  E  ++          I     GV  +L+   +  + +       +PG +T     
Sbjct: 61  FFSNLENKEKIVFTKEDRIPIYDSPTGVKEELLLTTSEPKNIEPSLVVLEPGCSTDIEKP 120

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIISA 179
           H+G E+G V+EGEI L +N + Y +   +++  +    H   N S+     +I  
Sbjct: 121 HEGVELGYVIEGEIELYLNKEVYLVRKEETFFYSANKKHFIKNKSSTNSATLIWI 175


>UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica
           RepID=B5FUU1_SALDC
          Length = 185

 Score =  156 bits (396), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 10/184 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +        L  +R Q+G S  R AE+SG++ + +  IE+++ SP ++TL K+     
Sbjct: 8   MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  S F S P+    P          +   Q + +  +   +P            PGT +
Sbjct: 68  VPFSMFISPPQAEFPP--------TFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVS 119

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-IS 178
                  G  E   V++G + +   G    + AG+         H++ N+S         
Sbjct: 120 ESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSL 179

Query: 179 AHTP 182
            H P
Sbjct: 180 IHYP 183


>UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri
           RepID=A5N143_CLOK5
          Length = 184

 Score =  156 bits (396), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 3/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D     G  L  IR+++ L+    ++L+ ++ S +  IE+   +P I+ L K+     
Sbjct: 1   MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  ++  +E + P    VV N D    +   G  +  + N +P + + + ++  + G++ 
Sbjct: 61  IPFTDLINEEKPP--ISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSY 118

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +    G EE   +  G + L I  ++Y L  G S      I H + N      R    
Sbjct: 119 ESKGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRAYML 178

Query: 180 HT 181
             
Sbjct: 179 LY 180


>UniRef50_Q722B2 DNA-binding protein n=57 Tax=Bacilli RepID=Q722B2_LISMF
          Length = 180

 Score =  156 bits (396), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 73/176 (41%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  GKR+  +R  + L+Q    E + LT   IS +E+D  SP+I TL  +L+V G +  +
Sbjct: 1   MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKD 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF E E   +      +    E   +G  +K +   +  + +  +    +  +       
Sbjct: 61  FFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEP 120

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              E    VL+GE+ + +   +Y    G++   +    H   N S     +I   T
Sbjct: 121 SLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSNEQATLILVAT 176


>UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria
           RepID=A8GBR8_SERP5
          Length = 189

 Score =  156 bits (395), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +    L   +RLS++RQQQG S    A+ +G++ + +S +E+ + SP  S L KL   YG
Sbjct: 5   LESADLRLAQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYG 64

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT- 119
           L++S   SE E      +   Q  +    + G     V           I  T + G   
Sbjct: 65  LTMSRLLSEVEDEPPELLHREQQTVWVDRASGFHRCSVSPPAALYKAEFIECTLEAGAVI 124

Query: 120 -TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                  H  E    +L G + LT+ G+ + L  G            F  +         
Sbjct: 125 AYDAPSIHALEHHLWLLAGRLELTLEGRTFQLEPGDCLRYRLFGASKFHASGPEPAHYTL 184

Query: 179 AHTPT 183
             +  
Sbjct: 185 VISRP 189


>UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1A8D2_THECD
          Length = 187

 Score =  156 bits (394), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%)

Query: 1   MSDEG---LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M+D+     A  + +  +R   G S  + A  +G++   +  +EQ + +P + TL ++ +
Sbjct: 1   MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60

Query: 58  VYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG 117
             G+ L+      E+P        +  ++  G  G S  L+       ++ +     +PG
Sbjct: 61  ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120

Query: 118 TTTGERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                     G  EI  V EG + +T++GQ + + AG +       PHS+SN    +CR 
Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180

Query: 177 ISAH 180
           +   
Sbjct: 181 VLTV 184


>UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO
          Length = 189

 Score =  156 bits (394), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
              R  E+R+ +  S R AA+ +G++ S +S IE+   SP  + L KL + +G+S+S+  
Sbjct: 5   LATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLV 64

Query: 68  SEPEKPDEPQVVINQDD-LIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIK 125
              E   +  V+   +  +  + + G   + +    + N  +  +     P  ++G    
Sbjct: 65  GGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPP 124

Query: 126 HQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAH 180
           H+   EE  TV  G + L +  + Y L AG +      + H F N S           
Sbjct: 125 HRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFIVI 182


>UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium
           denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ
          Length = 213

 Score =  155 bits (393), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 2/183 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +   +  G+ L  +R++ GLS  + A  SG++ + +  IE  K +P I+ L ++ +   +
Sbjct: 20  TKLSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQV 79

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S+    S P       V  ++  ++   + G + + +      +++ +   T     +  
Sbjct: 80  SVPSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSED 139

Query: 122 ERIKHQGE-EIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 G  +   VL GEI LTI       L  G S   N   PH+  N      +    
Sbjct: 140 VAAFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLV 199

Query: 180 HTP 182
             P
Sbjct: 200 VAP 202


>UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WCS3_BACSK
          Length = 193

 Score =  155 bits (392), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 5/176 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            + G   GK L ++R  +G+S    A+  G++   +  IEQ + +P +S + K+     +
Sbjct: 13  QEAGKQIGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKIANGLHI 72

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            ++   S     D      N+   +        ++ +        +       QP     
Sbjct: 73  PITALLSFEA--DVAIARANKAMKLSSSDDEFIVEPLFR--SQGLMECYRGYLQPQCRYE 128

Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                 G  E  TV+ G++ + + G+ +HL A  S       PH++ N       +
Sbjct: 129 SEAHRLGVVETVTVMAGQLTIEVEGESHHLSAYDSIHFKGDRPHAYINLGKETAVL 184


>UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter
           eiseniae EF01-2 RepID=A1WMB1_VEREI
          Length = 208

 Score =  155 bits (392), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 5/182 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G  + E+R ++GL+  + +E +G++   +S IE       + TL ++ +  G+++S  
Sbjct: 23  SVGAAIRELRLREGLTIAQVSEQAGISRGMLSKIETGSTMAGLDTLARIARTLGVAMSAL 82

Query: 67  FSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTG 121
           F + +        + +   +E+       G S  L+  G  P +       T    +   
Sbjct: 83  FGKYDASAAMAQHVKRGAGMEVVRRGTKSGHSYHLLAYGQGPVKWFEPFLITMADDSQRY 142

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
              +H G E   +LEG I      Q Y L  G + + +    H   N      R +S   
Sbjct: 143 PSFQHPGTEFLYMLEGVIEYRCGQQTYVLEPGDALSFDGQALHGPENLMQCPIRFLSIII 202

Query: 182 PT 183
             
Sbjct: 203 YP 204


>UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=Rhodobacterales
           RepID=Q1GGY8_SILST
          Length = 209

 Score =  155 bits (392), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 5/183 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E L  G R+ E+R+Q+  +   AA  +GL  S +S IE  ++SP    L+KL     +S+
Sbjct: 23  EALDLGARVRELRKQRDWTLEHAASQAGLARSTLSKIENGQMSPTYDALKKLAVGLQISV 82

Query: 64  SEFFSEPEKPDE--PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119
            + F+ P++       +V    +     +     +L+ +G   + +       +      
Sbjct: 83  PQLFTPPQRDQVNGRMIVTKFGEGSAHATATYEHELLADGLTRKNMLPYRARVRARSMDE 142

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
               ++H GEE   VL G + L     +   +  G S   +  + H+  + S+    I+ 
Sbjct: 143 FDGWVRHDGEEFMYVLTGVVKLYTEFYEPVEMRRGDSAYYDGAMGHNVISVSSEDATILW 202

Query: 179 AHT 181
             +
Sbjct: 203 VTS 205


>UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=Myxococcales
           RepID=B8JEE6_ANAD2
          Length = 260

 Score =  155 bits (392), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 1/183 (0%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            D     G  L  +R Q+ LS  + ++LSG++ + +  IE  + +P I+ L K+     +
Sbjct: 74  KDLTPVVGTNLRRLRTQRDLSLEKLSKLSGVSRAMLGQIELGQSAPTINVLWKISSALSV 133

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
             S   +         +      ++       S + +   +  R +        PG+   
Sbjct: 134 PFSALITARSTGGLHVLRAEHAKVLSSHDGSYSSRALFPFDEPRRVEFYELRMAPGSVER 193

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
               + G  E   V  G + + + G+   L  G +       PH + + +     +    
Sbjct: 194 ADAHNPGTIENLVVAAGAVEIEVPGRKEQLGTGDAIVFQADAPHVYRSRADVETVMYLVM 253

Query: 181 TPT 183
           T  
Sbjct: 254 TYA 256


>UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus
           RepID=A9A888_METM6
          Length = 209

 Score =  154 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 2/184 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M +      K L +IR + GLS    ++L+G++   +  IE+++V+P IST+ K+     
Sbjct: 26  MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S +   SE E   +   + N   +    S+      V N   +R   + +    PG   
Sbjct: 86  ISFTSLLSEKEADVKTVELNNVSPIY-DDSKKWRFYPVFNFEDSRPFEISYVEADPGVVM 144

Query: 121 GERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                    EE  TV EGE+ L+I  + Y +  G S      +PH + N S+ +  I   
Sbjct: 145 SSDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVIHMM 204

Query: 180 HTPT 183
               
Sbjct: 205 LYYP 208


>UniRef50_Q7MEH5 Predicted transcriptional regulator n=82 Tax=Proteobacteria
           RepID=Q7MEH5_VIBVY
          Length = 232

 Score =  154 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 5/182 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           E L  G+R+ E+R + G++   A++ +GL  S +S IE +++SP    +QKL     + +
Sbjct: 49  EPLKLGQRIKEVRSRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLKIDM 108

Query: 64  SEFFSEPEKP--DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119
            + F  P K      + +          +Q    +L+     N+ +              
Sbjct: 109 PQLFEPPRKKVATGRRDITLAGQGKPHPTQTYEHELLATQLSNKKMMPFKSVVHARTFEE 168

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
            G+ ++H GEE   +L G +       +   L  G S   +  + H   + S     I+ 
Sbjct: 169 YGDWVRHDGEEFLLILSGAVQFYSEFYEPVVLSEGDSVYYDANMGHMLVSVSEEDAHILW 228

Query: 179 AH 180
             
Sbjct: 229 VT 230


>UniRef50_B6WAA2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
           DSM 7454 RepID=B6WAA2_9FIRM
          Length = 212

 Score =  154 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 4/187 (2%)

Query: 3   DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLS 62
           D+    GK +   R  Q LS ++ AE   ++ S +S IE  K +P+++TL+ + +   + 
Sbjct: 26  DQMDKLGKNIKNSRISQNLSLKKLAEKVDVSPSMLSQIESGKANPSLNTLKLISQHLKVP 85

Query: 63  LSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL---VHNGNPNRTLAMIFETYQPGTT 119
           +   F E +      V  N    I    +    +L   + + +    L +          
Sbjct: 86  MFTLFIEEDIDRPILVKKNNRIRITNKGEDSKYELSYDLLSPDTKGDLQLCEMKLSAYQY 145

Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
             +    H GEE+     G+I L +  +   L  G S  I     H + N S   C II 
Sbjct: 146 NSDNFNFHNGEEVAVCTLGKIELILENKTITLETGDSVRIPRKTKHRWKNPSKATCAIIF 205

Query: 179 AHTPTTF 185
           + +P  F
Sbjct: 206 SISPPIF 212


>UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium thermocellum
           RepID=A3DCV9_CLOTH
          Length = 183

 Score =  154 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 2/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS++     KR+ E+R+  G+S    A   G+     +  E   V   +S L K+   + 
Sbjct: 1   MSEQIKQISKRIKELREISGISAETLARELGIDSKTYTEYESGNVDIPVSLLFKIAGRFN 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           + LSE  +          V+ +D  + +   +    + +     N+ +     T +P + 
Sbjct: 61  VELSEILTGEAPKLHTYCVVRKDKGVSVERRKDYKYQSLAYNFANKKIEPFLVTVEPDSN 120

Query: 120 TGERI-KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +      H G+E   V+EG + + ING +  L  G S   ++G  H     +    + ++
Sbjct: 121 SEVNYNSHPGQEFNYVIEGVLKVIINGHEIILNEGDSLFFDSGAKHGMKAMNGKPAKFLA 180

Query: 179 AH 180
             
Sbjct: 181 II 182


>UniRef50_A3I6C0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905
           RepID=A3I6C0_9BACI
          Length = 182

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           L  G ++ ++R++  +SQ   A    LT S IS IE  K +P++ TL K+ +++ + ++ 
Sbjct: 4   LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPMAW 63

Query: 66  FFSEPEKPDEPQVVINQD-DLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           F  + +      V   +  + +E    G   +L+ N +    +     T   G       
Sbjct: 64  FVIQDQFDGISIVSKKERNETVETNQLGYQYELLANKSYMSNINPSIVTVHNGAENLALY 123

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            H+ +E   ++ G I+L  + + YHL  G S   +    H F N S+   ++++ +
Sbjct: 124 THENDEFIYIISGSIILKYDNKFYHLEEGDSAYFSGKKEHIFINNSSENSKVLTIY 179


>UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5
           Tax=Actinobacteria (class) RepID=A0JT75_ARTS2
          Length = 191

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 4/183 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+  +A G R+   RQ Q L+  + A+ +GLT   +S +E+D  SP++++L  L +V  +
Sbjct: 9   SNIPVAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSI 68

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S+ + F+ PE         ++   I +G +G+  +L+   +  R   +       G    
Sbjct: 69  SIGDLFAAPETH---LTKKDEGPRISLGGEGIIERLLTARSERRVQIIQAVIEPRGRGES 125

Query: 122 ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           E      + ++  V+ G I L +  ++Y L  G +       PH++ N +     ++   
Sbjct: 126 ELYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLWVL 185

Query: 181 TPT 183
            P 
Sbjct: 186 VPA 188


>UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F2H2_ACIC5
          Length = 260

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 5/181 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G+R+  +R ++ +        +GL+ S +S +E  +V P +  L ++  V+   LS
Sbjct: 25  EKRIGERIKRLRLKKSMGLVELGRHTGLSASFLSQLETGRVVPTLRNLARIAMVFSKDLS 84

Query: 65  EFFSEPEKPDEPQVVINQDDLIE---MGSQGVSMKLVHNGNPNRTLAMIFETYQP--GTT 119
            FF              +   +    +       + +    P+R L   +  + P    T
Sbjct: 85  YFFETEPHTLFRVHKKKERVRLPQTGVDDPTYFFESLGYMVPDRMLDPYYAEFVPLKKGT 144

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 H G E   V+ GE+ +    + + L  G     +   PH++         ++  
Sbjct: 145 EVRAHVHPGFEFLYVISGELEIKHGEKLHVLEGGDGVYFDASTPHAYQCAGKTPAAVVIV 204

Query: 180 H 180
            
Sbjct: 205 T 205


>UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FE71_DESAA
          Length = 527

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 4/180 (2%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
             + G  + ++R+    ++   A+ +G T   I+++E D++SP++S L +L +  G+   
Sbjct: 351 DSSFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPG 410

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE-R 123
            F  + EK                 +Q  S +++     N  L     T +         
Sbjct: 411 TFLRDEEKSAIRDQRAKA---YAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVE 467

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            KH+GEE   VL+G++ LT++ + + L  G+S   N+ IPH   + S    R +      
Sbjct: 468 YKHEGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527


>UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales
           RepID=Q3A4K5_PELCD
          Length = 188

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GK+L  IR +  L+ +  +E + ++ + IS IE+   +P++  L +L  V+  S++ F 
Sbjct: 7   IGKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKSINYFV 66

Query: 68  SEPEKPDEPQVVINQDD--LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER-I 124
            E E   E       +    +   +Q +  +    G  +      +   +P  T+G+  +
Sbjct: 67  EEVENTHEIVHSRPGERSCTVFDDNQNLRTESFTAGLRDPQFTSFYCVIKPHGTSGDADM 126

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
            H G+E+  VL+G + +T+ G+ + +  G+S +  + +PH ++N S     ++   +P
Sbjct: 127 FHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWVLSP 184


>UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=C4WPS4_9RHIZ
          Length = 211

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 9/192 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D   + G  L +IR +   +    + ++GL  S +S +E +++      L +L +  G
Sbjct: 1   MNDAKSSLGDILRDIRSRNHWTLAEVSAMTGLAVSTLSKVENNQMQLTYDRLIQLAQGIG 60

Query: 61  LSLSEFFSEPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY 114
           + ++E F     PDE       +      D   + +Q      +      + +  I    
Sbjct: 61  VDIAELFGAVATPDELSNVMGRRTFTKSGDGRSIITQNYDYLYICTEIYKKAMVPILAVA 120

Query: 115 QPG--TTTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSA 171
                   G  I+H+GEE   VLEGE+ L         L  G S   +    H + + S 
Sbjct: 121 HARTLEEFGPLIRHKGEEFIYVLEGELELHSEIYAPLRLKKGDSAYFDAMTGHGYLSVSE 180

Query: 172 GICRIISAHTPT 183
              +I+   +  
Sbjct: 181 EPAQILCVCSTP 192


>UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5
           RepID=B6JDE1_OLICO
          Length = 208

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 10/186 (5%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           + G+R+ ++R+ Q  +    A   GLT   +S +E  + +P + TL KL K  G  L+  
Sbjct: 19  SLGRRIRQLRKMQERTLDSLATEIGLTKGYLSKVETGRQTPPLGTLSKLAKALGTDLAGL 78

Query: 67  F-------SEPEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQPG 117
                   +E +      V  ++   +  G+   G   + +      + +     T+   
Sbjct: 79  VEHGPVEPAEQDFEGVSVVRADERRNVVRGATSFGYDYQSLVQNATGKHMTPFLFTFPSQ 138

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                  +H GEE+  VL G +   +  + Y L+ G     +    H          + +
Sbjct: 139 ILKEVFFEHGGEEMIFVLSGVVEFEVGNETYELMPGDCIYFDPRQRHRGRGKYGE-AKAL 197

Query: 178 SAHTPT 183
                 
Sbjct: 198 VVLYEP 203


>UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae
           PB90-1 RepID=B1ZY56_OPITP
          Length = 204

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 1/177 (0%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
                K++   R +Q LS    A  S ++   +S IEQ K +P I+ + K+     + L+
Sbjct: 24  SQIIAKKILTERHRQKLSLGDLAVRSDVSKGMLSQIEQGKRNPTIAVMSKIATGLRVPLA 83

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
               +        +  N ++ I   +    ++ +   +  + +        P        
Sbjct: 84  RLLPDDGPRVWRVIRANDENHILFDNDEHQLRTLSPIDLEKQVEFYELILHPHGKLVSDP 143

Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             +G EEI TV +G + +    ++  L  G S      +PH+  N            
Sbjct: 144 HARGAEEILTVAKGHVQVKSGEKETELRRGDSAYYAADVPHAIVNLGNTEAVAYMIV 200


>UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RH93_9CLOT
          Length = 184

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+++ ++R+++ L+ +  AE +GL+   IS +E+  V P++S+L+K+ +  G+S     
Sbjct: 2   VGEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP-YLL 60

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNP----NRTLAMIFETYQPGTTTGER 123
            +  +     V  +Q  +I+     +  ++V   +       ++ + F+    G  + E 
Sbjct: 61  VDQSEHHPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEEF 120

Query: 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
           + H  EEI  +L+GE  + +    YHL AG S  +   +PH   NT           TP
Sbjct: 121 LTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFCVMTP 179


>UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cellular organisms
           RepID=A5UJ53_METS3
          Length = 193

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 10/193 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++    G+++  + + + +S    A  S +    +  I   ++ P+++ L K+ +V G
Sbjct: 1   MPNKN-KIGEKIKTLMEVRNVSLDELANDSDVNIELVEKILNGEIIPSLTPLTKIARVLG 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEM--------GSQGVSMKLVHNGNPNRTLAMIFE 112
           + +  F  + E+     V   + D +           +  +    +  G  +R +     
Sbjct: 60  VRIGTFIDDDEQTGPLVVRKGKSDKVVYFSGDENKTENSNLEFYSLAAGKSDRNMEPFII 119

Query: 113 TYQPG-TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
            ++     + E   H+GEE   VLEG I +     +Y L  G S   ++ + H   +++ 
Sbjct: 120 DFKVDAEESHELSSHEGEEFLYVLEGTIEVIYGQNNYVLETGDSIYYDSIVSHHVHSSND 179

Query: 172 GICRIISAHTPTT 184
              +I++      
Sbjct: 180 ETAKILAVIYTPV 192


>UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT
          Length = 199

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 2/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M D   + GK +   RQ  GLS    A+ SG++ + +S +E+ + +P +    ++ +  G
Sbjct: 1   MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
            SL++   +    +   V  +Q   +      V    + +   +R L + +     G ++
Sbjct: 61  CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120

Query: 121 GERIK--HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           GE         E+ TV+EG + + + G+ + L  G S          + N      +I+ 
Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQILL 180

Query: 179 AH 180
             
Sbjct: 181 LI 182


>UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Clostridium
           RepID=C6PVT7_9CLOT
          Length = 182

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 2/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D     G  L  +R ++ L+    + L+G++ + +  IE+ + +P IS L K+     
Sbjct: 1   MNDPTYNIGSVLKRVRFERELTLEETSNLTGVSKAMLGQIERGESNPTISILWKISTGLR 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S SE         +   + + + + E   + +    V   NP       +    PG   
Sbjct: 61  ISFSELLGSENDDYKAVSIDDIEPVYESDGKMILYD-VFPFNPLSGFEYFYIKLLPGAHH 119

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                    EE   V +G + LT+  Q + L +  +        H++SN        
Sbjct: 120 VSTPHQSSVEEYIVVTKGTLKLTLGEQTFELTSPAALRFKPNKSHTYSNPYDEEVIF 176


>UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q8Q5_9ENTR
          Length = 199

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +      G RL  +R+ +G+     AE  G++ S IS +E++    +I+TL K+ +V G+
Sbjct: 15  NTPDFNVGIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGI 74

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           + ++ F   + P    V   Q   I +G + +   L+  G  +  + +  E    G +  
Sbjct: 75  TPAKLF---DPPSTSFVPAGQGTPISLGGEKMREYLISGGVNDDMMVLYSEIDPLGGSGA 131

Query: 122 ERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISA 179
           E    +   ++  VL GE+ + +  Q Y L  G +      +PH++ N S   +C  I  
Sbjct: 132 EPYTLNAAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWV 191

Query: 180 HTPT 183
             P 
Sbjct: 192 IVPP 195


>UniRef50_A6UA69 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae
           RepID=A6UA69_SINMW
          Length = 182

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%)

Query: 24  RRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQD 83
           R  A  SG++HS IS IE+D++SP+I TL  +L   G +L  FFS+ +         +  
Sbjct: 20  RELAARSGISHSTISLIERDRMSPSIDTLGAVLDALGTTLPGFFSDLQSSLPYTPFYSST 79

Query: 84  DLIEMGS-QGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLT 142
           DLIE+G    +S +++   +PNR + M+ E Y  G  TGE   H  +E G VL G + +T
Sbjct: 80  DLIEIGKVDTISYRVIGLDHPNRQMLMLHERYAIGADTGEEFTHAAQEAGMVLSGAVEVT 139

Query: 143 INGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF 185
           +  Q   L  G  Y  ++ +PH F N   G   ++SA TP T+
Sbjct: 140 VGNQKRVLHPGDGYYFDSRLPHRFRNVHDGQSEVVSAITPPTY 182


>UniRef50_A1BBN6 Transcriptional regulator, XRE family n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1BBN6_PARDP
          Length = 211

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 6/181 (3%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
            L  G RL  +R+ Q L+ +  A L+G++ SA+S IE++ +SP ++TLQ++     + LS
Sbjct: 25  PLELGPRLKALRKGQQLTLQEVARLTGVSTSALSKIERNDLSPTLTTLQRIASGLQVELS 84

Query: 65  EFFSEPEKPDE---PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TT 119
               +          + +        + +   + KL+     ++    I    +      
Sbjct: 85  ALLGDEPGHAPTTGRRSIARAGQGDNLNNATCNNKLLCADLKDKCFTPIRTVVKARSPED 144

Query: 120 TGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                   GE   TVL+GE+V+     +   L  G S   +    H +++       +I 
Sbjct: 145 YEAWGVSDGEIFLTVLKGELVIHSRIYEPLVLYPGDSMYYDASTEHCWTSQGDVDAELIW 204

Query: 179 A 179
            
Sbjct: 205 V 205


>UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria
           RepID=A1AL86_PELPD
          Length = 192

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D     G +++ IR+  GL++ + AE    + + I+ +EQ +++P+++ L K+ +  G
Sbjct: 1   MTDRN-RIGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIE--------MGSQGVSMKLVHNGNPNRTLAMIFE 112
           + L     +            +++ I           +  +    +      R +     
Sbjct: 60  VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119

Query: 113 TYQPGTTTGERIK-HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA 171
             +P    G  +  H+GEE   +L+G + +      Y L  G S   ++ +PH   +  +
Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179

Query: 172 GICRIISAHTPT 183
              RI++     
Sbjct: 180 DSARILAVVYAP 191


>UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium
           sp. Marseille RepID=A6T0N3_JANMA
          Length = 221

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 9/192 (4%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +SD  L  G+R+SE+R  +G +Q R A  +G T   +S IE  K+ P I TL K+ +   
Sbjct: 13  LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72

Query: 61  LSLSEFFSEPEKPDEP---QVVINQDDLIEMGSQ--GVSMKLVHNGNPNRTLAMIFETYQ 115
             L+E               V   + + +  G +  G     + N   ++ +      + 
Sbjct: 73  TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVFP 132

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTI----NGQDYHLVAGQSYAINTGIPHSFSNTSA 171
                  R  H+GEE   V +G++  +       Q + L AG S   ++ IPH   +   
Sbjct: 133 NEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPHRGRSIKG 192

Query: 172 GICRIISAHTPT 183
               ++    P 
Sbjct: 193 ESKALVVIFRPP 204


>UniRef50_A5IRY5 Transcriptional regulator, XRE family n=81 Tax=Bacilli
           RepID=A5IRY5_STAA9
          Length = 179

 Score =  153 bits (387), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 3/177 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G ++  +R+ + L+Q   AE + L+   IS IE +  SP++ T   +++V G + SE
Sbjct: 1   MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSMETFLNIIEVLGTTPSE 60

Query: 66  FFSEPEKPDEPQVVINQDDLIEMG-SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           FF + E   E  +   ++ +I     +G  +  + + +    +  +  T +PG +     
Sbjct: 61  FFKDSEN--EKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDMEPLILTLKPGASYKNFN 118

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
             + +     + G+I L +  + Y               H  SN S    RI+   T
Sbjct: 119 PSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRLSNESNNETRILIVAT 175


>UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rhizobiaceae
           RepID=A6UF59_SINMW
          Length = 197

 Score =  153 bits (387), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 3/181 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S      G R+  +R  Q L+    A  +G++ + IS IE+ + SP    L +L    G 
Sbjct: 11  SQLDEVVGMRVRALRAAQDLTLDDLANRAGVSRAMISRIERGEASPTAQLLARLCSALGT 70

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT-- 119
           +LS  F+       P        L      G   + V        + ++   + PG    
Sbjct: 71  TLSALFASGVSEASPLARRQDQRLWRDPESGYLRRSVSPEGVGSPIDIVEVEFPPGARVV 130

Query: 120 -TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
              + +     +   +  G + LT+      L  G    +     H F N          
Sbjct: 131 FERQPMDRGITQHLWLFSGRLELTMESGQQLLEPGDCLFMGLEEAHIFHNPYEEAAHYAI 190

Query: 179 A 179
            
Sbjct: 191 V 191


>UniRef50_B4RGE3 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium
           zucineum HLK1 RepID=B4RGE3_PHEZH
          Length = 206

 Score =  153 bits (387), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 5/185 (2%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           + +  G  +   R++ GL+ +  AE SGL+ + IS IE+ K +P+I +L ++    G+ +
Sbjct: 20  DRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGVGV 79

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           + F       +E  +   +D          +   + N  P + L  +    QPG  +   
Sbjct: 80  NHFV--EATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISEAA 137

Query: 124 IK---HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                H GE    VLEG +     G  + L  G S         + SN      +++   
Sbjct: 138 NIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLWVG 197

Query: 181 TPTTF 185
           +   F
Sbjct: 198 SVVLF 202


>UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2
           Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ
          Length = 182

 Score =  153 bits (386), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 2/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M         RL ++R  +G S ++ A++SG++ SA+S IE  +VSP   TL  +   + 
Sbjct: 1   MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +++S+  +  E P +P V   +         G S ++V       +  +I  T +P    
Sbjct: 61  MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120

Query: 121 GER-IKHQGEE-IGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                   G E    +LEG + +T+  + + L AG         P  F       C +I 
Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLIM 180

Query: 179 AH 180
             
Sbjct: 181 LV 182


>UniRef50_UPI0001B58B91 XRE family transcriptional regulator n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B58B91
          Length = 197

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 3/185 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           SD  +  G  +  +R   G++ R  AE  GL+   +S  E+   S ++++L  +     +
Sbjct: 4   SDPAVRVGAEIKRVRSSLGMTLRELAERCGLSPGFLSLAERGVNSISLTSLFAIAGALEV 63

Query: 62  SLSEFFSEPEKPDEP---QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
              E      K           +      +       +++    P++ + ++     P  
Sbjct: 64  DAVELLGSAGKRSRAEYAVSRRDDPRAARVVMGEREHRVLTAELPDQHIEVLATRVNPTN 123

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                 +H GEE   V+ GE+   +  +   L AG +    +  PH+  N    +  ++ 
Sbjct: 124 APSPVTRHDGEEFCYVVSGELTFLMPDESVVLAAGDAIHFKSSTPHAVHNQGDVVAEVLW 183

Query: 179 AHTPT 183
                
Sbjct: 184 TVDRP 188


>UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria RepID=Q46QV6_RALEJ
          Length = 188

 Score =  152 bits (385), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 3/181 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + D   A    +   R+ +  S    AE SG++ + IS IE+ + SP  + L KL   +G
Sbjct: 5   LQDPTFAISTCVRVERESREWSLADLAERSGVSKAMISKIERGEASPTATVLGKLSGAFG 64

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           L LS   +  E+  E         +      G + + V   +    L ++  T  PG   
Sbjct: 65  LPLSMLLARAEQAGERLSRAADQPVWTDPETGYTRRAVSPRSGG-MLELVEVTLPPGARV 123

Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                      +   +  G +V       + L AG    +    P +F N  +  C  + 
Sbjct: 124 SYPPSAFTFLHQQIWLRSGALVFQEGEITHELEAGDCLQLGPPAPCTFYNPGSKPCSYVV 183

Query: 179 A 179
           A
Sbjct: 184 A 184


>UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium smegmatis str. MC2
           155 RepID=A0QRJ5_MYCS2
          Length = 189

 Score =  152 bits (384), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G RL + R+++G+S    A  + +T   +S  E+   + ++  L ++    G+ + + F 
Sbjct: 5   GARLRQFRRERGMSLTDVAAKAEVTKGFLSLAERGMTNVSVPVLMRICDALGIGIGDLF- 63

Query: 69  EPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQG 128
             E P  P V       +EMG  GV  +L+        + ++    +PG  +G   +   
Sbjct: 64  --EYPAAPIVRSGAGAPLEMGGHGVREELLTP-KTEHHVQVMRTVMRPGGGSGGAYRLDA 120

Query: 129 EEIG-TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
             I   VL G + +T++G+   L  G          H + N +AG   ++    P  
Sbjct: 121 ATIVAYVLRGALSITVDGETVVLNVGDCLTFGAKQLHDWHNPTAGEAEVLWTIAPPV 177


>UniRef50_A1WEC3 Transcriptional regulator, XRE family n=3 Tax=Comamonadaceae
           RepID=A1WEC3_VEREI
          Length = 229

 Score =  152 bits (384), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 6/184 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
             L  G++L   RQ  GL  ++ A   G++ S +S +E+   S ++ TL  L +   L +
Sbjct: 42  IDLWLGEQLRRRRQALGLPLQQVARACGISVSLLSQLERGLRSISMRTLGALAQELRLPI 101

Query: 64  SEFFSEPEKPDEP----QVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
                     +               I++G +G+  + +     +  + M      PG +
Sbjct: 102 ETLVRNTRYSEGEAEGAVARAGTHRRIDLGDKGIHKENLTPPAASGGVQMYRAVIDPGGS 161

Query: 120 TGE--RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           TG+   + H+GE++G V+EG++ L +  +   L AG S+     +   + N       I+
Sbjct: 162 TGDDLFLTHKGEQVGYVIEGQLDLFVQERLLKLKAGDSFCYGGDMSRRWRNPGQTSTTIL 221

Query: 178 SAHT 181
            A T
Sbjct: 222 WAIT 225


>UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile
           RepID=C9XR14_CLODC
          Length = 181

 Score =  152 bits (384), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 5/182 (2%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+D  L  G++++E+R++Q LS R  A+L+ +T S +S IE+   +P++++L+ +     
Sbjct: 1   MND--LNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58

Query: 61  LSLSEFF-SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           + L  FF SE +K +      N+  +I  GS+ V  +++   +    L        P T+
Sbjct: 59  VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGN-LEFAIMDLAPNTS 117

Query: 120 T-GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
           +  +RI H G+EI  VLEGE+ L ++  ++ L  G S  +  G  H + N S    ++I 
Sbjct: 118 SCIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIF 177

Query: 179 AH 180
           A 
Sbjct: 178 AV 179


>UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM
          Length = 183

 Score =  152 bits (384), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 3/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M+       + L  +R ++ LS  + AELS ++   +S IE+   +P I+TL K+     
Sbjct: 1   MN-INSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLK 59

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +  +    + E         N +  I            +   P R   +       G + 
Sbjct: 60  VPYTLLLEQKEYDTCIIKKSNLEPQIS-EEGHYRAYCYYTNTPYRNFELFQIELDEGCSY 118

Query: 121 GERIKHQ-GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                 +  EE   VLEGE+ L +N + Y L    S + +    H +SN   G  +    
Sbjct: 119 RSVGHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKATIT 178

Query: 180 HTPTT 184
           +    
Sbjct: 179 NFYPV 183


>UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium
           vanbaalenii PYR-1 RepID=A1T298_MYCVP
          Length = 180

 Score =  151 bits (383), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 6/168 (3%)

Query: 12  LSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPE 71
           L  +RQ++G++    A  +GLT S +S +E+ +  P+I+   K+ +   + +++ FS+  
Sbjct: 5   LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64

Query: 72  KPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEI 131
           +     V    +              V      + ++          TT     H G+E 
Sbjct: 65  EVSTISVDRAAER------GADRHHAVAARMLGKEMSPFVVRPGRTFTTHPHPTHLGQEF 118

Query: 132 GTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             V  G + L+ +G+   L AG     +   PH           ++  
Sbjct: 119 IFVHSGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166


>UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NHK0_EUBSP
          Length = 184

 Score =  151 bits (383), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M        + L EIR+ +GLS  +A+ L+ ++ S +S +E+ +V+P IST+ KL     
Sbjct: 1   MERLNQIIAENLKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLK 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKL--VHNGNPNRTLAMIFETY-QPG 117
           + ++ F  +     +P     + +++ +       +L  + N    +   +    + + G
Sbjct: 61  VPVTAFTLD---KPKPFSKTGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFDEGG 117

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI- 176
              G R  +   E  TV  G++ L+   ++Y L AG++ + N    + + NT  G+    
Sbjct: 118 MMPGNRQMNGTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTAS 177

Query: 177 ISAHTP 182
           I  H P
Sbjct: 178 IVVHYP 183


>UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusobacterium
           RepID=A5TWB6_FUSNP
          Length = 182

 Score =  151 bits (383), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 74/177 (41%), Gaps = 3/177 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M    +   + +  IRQ++ LS    A+LS ++ S ++ IE+ + +P +STL K+     
Sbjct: 1   MDRLNILVSENIKRIRQEKNLSLGDLAKLSDVSKSMLAQIERGEGNPTLSTLWKIANGMQ 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S +   ++P+ P +   +   + +++M     +  L    +     ++         + 
Sbjct: 61  VSFNTLIAQPKLPYKVTKLAEIEPILDMNGGLKNYSLFS--DIENNFSVYQIEVGKEISW 118

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI 176
                  G  E   V++G + + +  + + L  G++      IPH + N   G    
Sbjct: 119 ISEAHLSGTAEFVIVIQGTLEIKLEEKTFILKKGENLWFKADIPHGYCNLDEGTTIF 175


>UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sphingobacterium
           spiritivorum RepID=C5PR45_9SPHI
          Length = 205

 Score =  151 bits (382), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 77/187 (41%), Gaps = 8/187 (4%)

Query: 1   MSDEGL-APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59
           M D  +     R+ EIR+ +G++ +  A+ +G++   IS +E ++  P++  L  ++   
Sbjct: 13  MKDNTIFKISSRIKEIRKGKGITIQDLADRAGVSKGLISQVENNRTVPSLLVLINIIGAL 72

Query: 60  GLSLSEFFSE--PEKPDEPQVVINQDDLIEMGSQG----VSMKLVHNGNPNRTLAMIFET 113
            + L+EFF     +    P +V  ++       +     +  ++      N T+ ++   
Sbjct: 73  EIDLTEFFKGFTSDGDLGPVIVRRKEQYESFEKEHALGFMYKRIFTTSIVNSTMDIVLLE 132

Query: 114 YQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGI 173
            +P       +  +  E   +L GE+      +  HL  G S   +  + HS  N+    
Sbjct: 133 LEPDANR-PMVTTEAFEYKYILAGEVEYIFENEVVHLKEGDSILFDGRLSHSPRNSGTQK 191

Query: 174 CRIISAH 180
             ++  +
Sbjct: 192 ASMLIVY 198


>UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax=Vibrio
           RepID=A5F6U2_VIBC3
          Length = 181

 Score =  151 bits (382), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 10/185 (5%)

Query: 1   MSDEGL--APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKV 58
           M+D         +L  +R+ +GLS    A+L+G++ + +  IE+ + SP I+TL K+   
Sbjct: 1   MTDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASG 60

Query: 59  YGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
              S S FF+   +           +        + +  +     +  L +   T     
Sbjct: 61  LEASFSAFFANDPQLLSS-------ERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHH 113

Query: 119 TTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                    G  E   VLEG + +  + Q + L  G+     +  PH ++  +       
Sbjct: 114 QQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQN 173

Query: 178 SAHTP 182
               P
Sbjct: 174 IVAYP 178


>UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria
           RepID=Q4ZU57_PSEU2
          Length = 201

 Score =  151 bits (382), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 5/178 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G ++   RQ Q L     A ++G++   +S IE  +VS ++  L +L  V G+ +S+ F
Sbjct: 17  LGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLF 76

Query: 68  SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTGE 122
           S+ ++     +++  D+ +E+      +G +  L+++   P ++      T    +    
Sbjct: 77  SQYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFP 136

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              H G E   +LEGE++     Q Y + AG S   +  IPH          +++S  
Sbjct: 137 TFSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPHGPEQLVQVPIKLLSIM 194


>UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11I99_MESSB
          Length = 198

 Score =  151 bits (381), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 5/181 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
               +  +R+ +GL+    A   G +   +S +E+    P+++ L+ L   + + +S F 
Sbjct: 20  LASDIRRLRKARGLTLAGLASQLGRSVGWLSQVERGISLPSVADLRALANHFKVPVSFFL 79

Query: 68  SE---PEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
           +     EK  +  V  ++   +  G   V  +L+      R   +I   +   T   +  
Sbjct: 80  TPAASDEKELQVVVRADKRRKLVSGQPRVLEELLSPNLGGR-FEIICCEFAGNTPLPQPR 138

Query: 125 KHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
           K   EE G V+ G + + + G+ Y L AG S+ +       + N       ++   +P  
Sbjct: 139 KRAAEEAGYVVSGALDIEVTGKWYELSAGDSFRVRGETL-RWRNPHEEPAIVVWVVSPPV 197

Query: 185 F 185
           +
Sbjct: 198 Y 198


>UniRef50_D0CWR1 DNA-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
           RepID=D0CWR1_9RHOB
          Length = 331

 Score =  151 bits (381), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 2/159 (1%)

Query: 21  LSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI 80
           ++ +  + +SG++   +S +E+   +P + TL ++ +   +    F   P    +     
Sbjct: 145 MTLQDVSNVSGVSVGYLSQVERGNATPTLGTLTQIAQALEVDTDYFVRTP-HTVDSLTRG 203

Query: 81  NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIV 140
           +      +    +  + +        L        PG  + E + H GEEI  +LEG I 
Sbjct: 204 DSRPKFAVAGSSIEYEQIGVERAGHELTSYVMNVPPGYES-EVVTHVGEEIIYILEGTIS 262

Query: 141 LTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +  ++Y +  G S       PH ++N +    RI+  
Sbjct: 263 QIVGEREYIMGPGDSLHYLGTTPHCWANKTDRPARILWV 301


>UniRef50_A1WLG9 Transcriptional regulator n=2 Tax=Bacteria RepID=A1WLG9_VEREI
          Length = 178

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            GKRL E+R  +G+S R  A+ +G++ + +S IE+    P++STL+ L  V+G S++  F
Sbjct: 2   LGKRLHELRLTRGMSLRALAQAAGVSPTLLSQIERGVTEPSLSTLRALSAVFGESMAALF 61

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT-GERIKH 126
            +P  P        +   I      VS + + +GN    + ++   + PG  +    I H
Sbjct: 62  RDPAAPSVWLSRPGERTQITGPKGTVSYERLTHGNA--PMEVLRAVFVPGQYSVAGTISH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTT 184
              E   V+ G + + + G  + + A ++   +    H + N  A    I+ + TP  
Sbjct: 120 ASVECLYVIRGTMTVEVAGIAHQVQAAEAITFDAIHAHRYINRGAVDAEIVLSVTPPI 177


>UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteobacteria
           RepID=A8HXH8_AZOC5
          Length = 249

 Score =  150 bits (380), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 4/183 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +    A G ++  IR+Q  L+    A  +G++   +S IE  ++SP++STLQ + +   +
Sbjct: 60  TSLEQALGIQVRSIRRQLDLTVSDLANAAGISVGMLSKIENGQISPSLSTLQSVARALNV 119

Query: 62  SLSEFFSE-PEKPDEPQVVINQDDLIEMGSQ--GVSMKLVHNGNPNRT-LAMIFETYQPG 117
            ++  FS   E+ D   V   Q  +IE      G   +L+ +G      +     T    
Sbjct: 120 PITALFSTFEERHDCSYVKAGQGVVIERRGTKVGHQYELLGHGLGGDIVVEPYLITLTQE 179

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                  +H G E   +L GE+V     + YHL  G S   ++   H            +
Sbjct: 180 AVPYTSFRHGGVEFIHMLSGEVVYRHGDRTYHLRPGDSLMFDSAAAHGPEELITRPMTYL 239

Query: 178 SAH 180
           S  
Sbjct: 240 SII 242


>UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID=C4IIY7_CLOBU
          Length = 183

 Score =  150 bits (380), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M          L  IR+ + +S    +E +G++ S +  IE+ + +P ++ L K++    
Sbjct: 1   MDYINRNVSINLKNIRKSKKMSLDVVSEQTGVSKSMLGQIERGESNPTVAILGKIVSGLR 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           +S ++    P++        + +   E   Q            +R   +     +PG   
Sbjct: 61  VSFNDLVCMPKEEIYIVKKESLEPSKESTDQYSVYTY-FPYEEDRNFEIYMIEIKPGGVY 119

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG----ICR 175
                 +   E   V++GE+ L I+ + Y + +G +   NT   H + N +         
Sbjct: 120 TTGSHGEKTCEYINVIKGELTLEIDEKKYVIKSGDAVRFNTDKDHVYINDTNELLSFNAV 179

Query: 176 IIS 178
              
Sbjct: 180 FYW 182


>UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM1_DESHD
          Length = 179

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 3/177 (1%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +  +R+ Q LS +  AE + LT S +S IE++  SP++ TL+K+    G  +S F
Sbjct: 3   DLGSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALGYPISSF 62

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKH 126
           F  P+      +       I++        L++N      L            + E I H
Sbjct: 63  FVNPQFTST-HIPAEAQRTIQINPGMTLRFLINNVGQRNQLGAYIAEVA--DLSEEIIIH 119

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            G ++  VLEGE+   +  ++++L  G S   N  +PH  S  S    ++  A TP 
Sbjct: 120 HGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPHWISRKSKSKLKLFVATTPP 176


>UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Burkholderiales
           RepID=B2UK31_RALPJ
          Length = 198

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 5/179 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
           A G +L  +RQ + LS    +  +G++ S +S +E++  +P ++ L +L    G+SL++F
Sbjct: 16  AVGAKLQALRQARKLSLDELSRHAGVSKSMLSQVERNLANPTVAVLWRLATALGVSLADF 75

Query: 67  FSEP----EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGE 122
            S        P    +  +   +I+       +K++   +            QPG     
Sbjct: 76  LSPESAADAAPAVTVIPAHSIPVIKSPDGKCELKILGPVDLAARFEWYELAIQPGGMLAS 135

Query: 123 RIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
                G +E  +VL G + +     +  +  G++      + H+ SN    +   +   
Sbjct: 136 EPHELGAKEHLSVLNGTVTVQSGPSEKKVRHGETARYPVDVQHAISNAGKTVATALLVV 194


>UniRef50_A8I3G0 Helix-turn-helix XRE-family-like protein n=4 Tax=Rhizobiales
           RepID=A8I3G0_AZOC5
          Length = 217

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 11/186 (5%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+ L   RQ + L+ ++ AE +GL+ S +S +E  ++S     L +L    G++++E 
Sbjct: 14  QLGECLKAARQARKLTLKQVAERTGLSLSTLSKVENHQMSLTYDKLLQLTNGLGIAIAEL 73

Query: 67  F--------SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           F        + P+     + +    D   + ++  S         ++ +  I    +  T
Sbjct: 74  FHSAADRAPTAPQMVTARRSISRAKDGDVIDTRTYSYAYKCTDLMSKAMVPITGELRART 133

Query: 119 --TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
               G  I+H GEE   V  G + +         L  G S  I++ + H++ N      R
Sbjct: 134 LAEFGPLIRHPGEEYVYVTAGRVEVHTEYYAPEILETGDSLYIDSSMGHAYLNAGEDPAR 193

Query: 176 IISAHT 181
           I+   T
Sbjct: 194 IVCVCT 199


>UniRef50_D1XSL5 Transcriptional regulator, XRE family n=10 Tax=Streptomyces
           RepID=D1XSL5_9ACTO
          Length = 206

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 3/180 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           +DE      RL ++R+ +GL+   AA  + L+ + +S +E  +  P++  L  L ++YG 
Sbjct: 12  ADEVPGVAPRLRDLRRNRGLTLETAARRAELSPAHLSRLETGRRQPSLPMLLGLARIYGT 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           ++SE   E     +  V       +  G++    +    G   R +  +      GT + 
Sbjct: 72  TVSELLGEMPPERDAIVR---GGPLGAGAEADGWRYRQAGGSGRAMQALRVHVPHGTESE 128

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H GEE   VLEG + + +    + L AG S   ++  PH  +       +++  HT
Sbjct: 129 LVRVHPGEEWLYVLEGRLRVALGESLHDLEAGDSAHFDSLTPHRIAALDREGAQLLFVHT 188


>UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM
           12804 RepID=A9IK40_BORPD
          Length = 219

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 7/184 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
                G++L ++R+Q GLS  + A+  G++   +S +E+   SP++  +  L   +G+S+
Sbjct: 28  IDFWLGQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSV 87

Query: 64  SEFFSEPEKPD----EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
                   +                 +++  +G+  ++       R+L +      PG +
Sbjct: 88  DSLLRGTGQGGGEAAGRVARAGTHRRVDLLDKGIHKEMYTPP-AGRSLDLCRARIAPGGS 146

Query: 120 TGERIKHQ--GEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           TG+ +     GE+IG VL+G + L +  Q   L AG S+   +  P  + N  + +  +I
Sbjct: 147 TGDDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVI 206

Query: 178 SAHT 181
            A +
Sbjct: 207 WAIS 210


>UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia
           RepID=B2T7X7_BURPP
          Length = 212

 Score =  150 bits (379), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 4/177 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+++  +R ++ ++    +  +G++ S +S IE+DK +P I+   +L    G+SL   
Sbjct: 34  RVGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSL 93

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKLV--HNGNPNRTLAMIFETYQPGTTTGERI 124
           F+ P+K  E   V    ++  +       +L                 T QPG       
Sbjct: 94  FA-PQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNA 152

Query: 125 KHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              G  E  TVL+G I +   G    L A  +       PH+  N   G  + +   
Sbjct: 153 HEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKALLVV 209


>UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ERF8_OCEIH
          Length = 189

 Score =  149 bits (378), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 5/183 (2%)

Query: 1   MSDEGLA-PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59
           M    L   G ++ ++R +   +Q++ A+  G++ S +S IE  + + AI+TL K+    
Sbjct: 1   MVPIDLQSIGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDAL 60

Query: 60  GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQ-GVSMKLVHNGNPNRTLAMIFETYQPGT 118
            + L+    + E+ D                  G S +L+ N +    +        P  
Sbjct: 61  KVPLAWLLDDKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTPKH 120

Query: 119 ---TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
                 +   H  +E   +LEGEI L  NG+   L  G S       PH F   +     
Sbjct: 121 RNLRQDKTYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLFLPVNDRGAM 180

Query: 176 IIS 178
           +++
Sbjct: 181 VLT 183


>UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FZM0_DESHD
          Length = 181

 Score =  149 bits (378), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 3/178 (1%)

Query: 6   LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSE 65
           +  G+ +  IR+++ L+  + A+   L++  IS IE++ VSP+++TL+++ +   + L  
Sbjct: 2   IEVGEFIRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLES 61

Query: 66  FFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIK 125
           FF +P+  +     + +D+   + ++G + +L+ + +    +                  
Sbjct: 62  FFLDPD-TEIIYSYLKKDEQQYIPAEGRNWRLLIDHSKTNLMGAF--VVDSTAVDKNVYS 118

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           HQG E+  VLEGE  L I+ +DY L AG S   +  I H  +       ++I   TP 
Sbjct: 119 HQGVELIYVLEGETSLNISKEDYQLKAGDSLYFDASIMHWDNKKPDVPLKLIVIATPP 176


>UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes
           RepID=D1YD37_PROAC
          Length = 258

 Score =  149 bits (378), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 2/185 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
                A G R+ + R  +  +  + A  +G++   +  +EQ  V+P + TL +L    G+
Sbjct: 70  EPLAHAIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGV 129

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            L      P           Q   +  G  G    LV    P   + +   T  P     
Sbjct: 130 GLPALVEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHD 189

Query: 122 ERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRI-ISA 179
                 G  E+  V EG + + ++G  Y L  G + +      H++ N++    R  ++ 
Sbjct: 190 SEAHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTV 249

Query: 180 HTPTT 184
             P  
Sbjct: 250 FEPDV 254


>UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CXI9_VARPS
          Length = 195

 Score =  149 bits (378), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 2/178 (1%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
              RL  +RQ + LS    AELSG++ + IS +E+ + SP    L +L    G+ L++  
Sbjct: 18  IAARLLALRQAKALSLAELAELSGVSKAMISKVERAESSPTAVLLGRLAAGLGVPLAQLL 77

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ--PGTTTGERIK 125
           +E +          + ++      G   + V     +  + M+                 
Sbjct: 78  TEEKASPRRLRPRAEQEVWRDPEAGYLRRQVAERGASGGVEMVEIELPRSAQVAYPRWSG 137

Query: 126 HQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
               +   +LEG + +    + + L  G         P  F       CR +   +P 
Sbjct: 138 KPYRQCLWMLEGALRVDYGEERFELAPGDCLDFGVDRPLVFKALGRAGCRYLLVASPA 195


>UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium
           denitrificans ATCC 51888 RepID=C6QC19_9RHIZ
          Length = 218

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 5/179 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G  +   R +  L+    +  +GL+ + +S IE      ++  L++L    G+ L + 
Sbjct: 36  RIGAVIKRRRAEANLTLADLSAGAGLSSAMLSRIENGMAMASLDALERLCAAVGIGLGDL 95

Query: 67  FSEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNG-NPNRTLAMIFETYQPGTTTG 121
           F E +       ++ + + +E+       G + +L+     P +     F      + + 
Sbjct: 96  FKETDTQRGSAQLVKRAEQMEVVRVGTKFGHTYRLLAYDRGPRKLFEPFFIEMDKKSESY 155

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
            R  H G E   +L+G +      + Y +  G ++  +  + H          R ++  
Sbjct: 156 PRFSHPGTEFIYMLQGRMEYRFGDRTYLVEPGDAFTFSGDVVHGPEKLLDDRIRFLAII 214


>UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Nakamurella
           multipartita DSM 44233 RepID=C8XAN3_NAKMY
          Length = 225

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 6/185 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           ++E    G +L  IR+ Q  +    AE SGLT   +S IE+D  S +++ L ++    G+
Sbjct: 12  NEETARIGAKLKAIRRAQRRTLEEVAEASGLTKGFLSKIERDLASASVAALLRICATLGI 71

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
            LS  F          V   Q   I+ G Q +    +      R + ++    +PG  +G
Sbjct: 72  PLSSLFESD--STGEVVRAGQYPRIDFGGQDLEEYQLTPF-AERRVQVLRSDIRPGGGSG 128

Query: 122 -ERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS-AGICRIIS 178
            E      E E   V+ G + +    +   L  G ++  +  + H+F   +   +  ++ 
Sbjct: 129 PEAYSLPAEVEFAYVVTGRLAIGFADRTVELGPGDAFTFDATVNHTFRAEAVDELTTVLW 188

Query: 179 AHTPT 183
              P 
Sbjct: 189 VLCPA 193


>UniRef50_B5GJ69 DNA-binding protein n=10 Tax=Streptomyces RepID=B5GJ69_9ACTO
          Length = 204

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 4/180 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            +  +     L E+R++ GL+   AA+ + L+ + +S +E  +  P++  L  L + YG 
Sbjct: 10  EELAVTVAPHLRELRRRAGLTLEAAAKAASLSPAHLSRLETGRRQPSLPMLLALARTYGT 69

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           ++SE     E P  P  V+    +    + G +     +G   R +  +      G+   
Sbjct: 70  TVSELLG--ETPAGPGAVVRAGTMEPTEAGGWTYWQ--SGGSGRAMQALRVRVPYGSQGD 125

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHT 181
               H GEE   VL G + L +    + L  G S   ++  PH  +        ++  HT
Sbjct: 126 IVRVHPGEEWLHVLTGRLRLRLGDSAHLLGPGDSAHFDSLTPHRIAAADPDGAVLLFVHT 185


>UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enterobacteriaceae
           RepID=D1RT89_SEROD
          Length = 462

 Score =  149 bits (377), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 3/182 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + +     G R+   R+ +  S    AE +G++ + +  IE+   SP    L +L   +G
Sbjct: 278 LDNINQRIGARIRIEREARHWSLSDLAERAGVSRAMVHKIERGDSSPTAMLLARLSGAFG 337

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           LS+S+  +  E  +   +      +      G   + V   +    L ++      G   
Sbjct: 338 LSMSKLIARAETQEGRLLRREDQPVWVDPESGYVRRHVSPRSDI-PLDLVRVELPAGAEI 396

Query: 121 GERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                      ++  +L GE+V       + + AG    +       F N S   C  + 
Sbjct: 397 PMPASVYAFKRQLIWLLSGELVFLEGENRHEMAAGDCLELGPPADCVFKNESDEPCIYLV 456

Query: 179 AH 180
             
Sbjct: 457 VV 458


>UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin sensor domain n=3
           Tax=Bacteria RepID=Q1IM53_ACIBL
          Length = 201

 Score =  149 bits (377), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 8/183 (4%)

Query: 5   GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLS 64
               G++L  +R ++ L      + +GL+ + +S +E+ K+ P + TL ++  V+ + L 
Sbjct: 18  PYRIGEKLRALRLKKKLGLVELGKHTGLSPALLSKLERGKLFPTLPTLLRIALVFSVGLD 77

Query: 65  EFFSEPEKPDEPQVVINQDDLIEMGSQ------GVSMKLVHNGNPNRTLAMIFETYQP-G 117
            FF++ E       V+ +D+ +    +          + +        L      ++   
Sbjct: 78  YFFAD-ESRRHVVSVVRKDERLRFPERPNTRDVAYYFESLDFAALEPKLNAFLADFEHVP 136

Query: 118 TTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
             T    +HQG E    L G++ L I G  Y L  G S   ++ +PH++ N     C  +
Sbjct: 137 AETLRLHQHQGFEFLHTLAGKLELVIGGIPYELSQGDSIYFDSSVPHTYRNAQKKPCSAL 196

Query: 178 SAH 180
              
Sbjct: 197 VVT 199


>UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Bacteria
           RepID=B2JWV8_BURP8
          Length = 189

 Score =  149 bits (377), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 3/180 (1%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            +     G R+   R+ +G S    AE SG++ + +  +E+ + SP  S L KL   +G+
Sbjct: 6   DNVDQRIGARIRAEREGRGWSLTSLAEKSGVSRAMVHKVERGESSPTASLLAKLAGAFGM 65

Query: 62  SLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTG 121
           S+S   +  E  D   +   +  L      G   + V   +    L ++     P T   
Sbjct: 66  SMSALLALAELEDGRLLRRAEQPLWVDPQSGYVRRHVSPKSA-SPLNLVEIDLPPSTEIP 124

Query: 122 ERIKH--QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
                    +++  VL+GE+V    G+ + L AG    +       F N S+  C+    
Sbjct: 125 MPASAYLHSQQLIWVLDGELVFIEGGERHQLGAGDCLELGPPSDCVFKNESSRACKYAVV 184


>UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepID=B6BEY2_9RHOB
          Length = 182

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 2/183 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MS         +   R + G S    A  +G+  S +S +E    +P++ TL  L    G
Sbjct: 1   MSAPHQMIAAAIQRERNRAGKSLSALAAQAGIAKSTLSQLEAGNGNPSVETLWALAAALG 60

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           + LS  F E E P    +   + + +E      +  L+     N    +     QPG   
Sbjct: 61  VPLSLLF-ETEAPSTTLIRAAEGEPLESEQSDFTAVLLSRCPSNVRRDIYRVVMQPGEAR 119

Query: 121 GERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
             +   +G  E   V  G++    +GQ+  L  G  Y      PHS+    A    ++  
Sbjct: 120 RAQPHPRGTVEHMLVCSGQMRAGPDGQEDVLQPGDYYTYPGDRPHSYEALQADTLFLMVM 179

Query: 180 HTP 182
             P
Sbjct: 180 EAP 182


>UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=Bacteria
           RepID=C6CLM7_DICZE
          Length = 195

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 2/185 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           +S+      +RL+ +R+++G S    ++ SG++ + +S +E+ + SP    L +L  VYG
Sbjct: 11  LSETDRRLAERLAALRRERGWSLDELSQSSGISRATLSRLERMESSPTAVLLGRLCAVYG 70

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--T 118
            ++S   +E E     ++   Q  +      G   + V   +      MI      G   
Sbjct: 71  CTMSSLLAEVEIQLPQKLSAAQQPVWIDPETGFIRRSVSPPSAGFRAEMIHGELPAGARI 130

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIIS 178
                     E    VLEG++V+T+ G  + L    S          F N      R + 
Sbjct: 131 DYHAPPLAGLEHHLYVLEGQLVMTLEGVIHTLGPQDSLRYRLYGASGFHNPGPDAVRYLI 190

Query: 179 AHTPT 183
           A    
Sbjct: 191 AICTP 195


>UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium
           caulinodans ORS 571 RepID=A8I731_AZOC5
          Length = 231

 Score =  149 bits (376), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 5/188 (2%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
           S+   A G  + E R  +GLS +R A+ +GL+   +S +E+   SP++  L+ +    G+
Sbjct: 45  SEHDRAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGV 104

Query: 62  SLSEFFSEPEKP---DEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           ++   F E   P       +   Q   +++G++G+  + +   +   TL ++     PG 
Sbjct: 105 TVQSLFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSDL-STLQIMEIILAPGG 163

Query: 119 TTGER-IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
           ++GE    H GEE G V+EG + L I+G  + L+ G S+A  + +PH F N S G+ R++
Sbjct: 164 SSGEEAYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRNLSEGVTRVL 223

Query: 178 SAHTPTTF 185
              TP  +
Sbjct: 224 WITTPPVW 231


>UniRef50_B2JNZ3 Transcriptional regulator, XRE family n=4 Tax=Burkholderia
           RepID=B2JNZ3_BURP8
          Length = 215

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 6/181 (3%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
           +  A G RL + R+ +GL+  + +E SG+  S IS  E+  ++        L     L  
Sbjct: 21  DHQAVGARLRDARKARGLTLMQLSEQSGIAVSTISKAERGDIALTYDKFAALAHALQLEF 80

Query: 64  SEFFSEPEKPDEPQVV---INQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT-- 118
              F   ++     +V       + +   +      ++ N    + +  +    +     
Sbjct: 81  DAIFGRAKRSGSSPIVPTFTASGEQMIYDTPNYEYGMLANDLTGKRMVPMRAHVRARKLS 140

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
              + I+H GEE   +L G + L    G  + L  G S   ++ + H + +T      ++
Sbjct: 141 DFPDYIRHSGEEFVFLLNGSLELRFETGAVFQLKPGDSLYFDSAVGHVYLSTGKKPAEVL 200

Query: 178 S 178
            
Sbjct: 201 V 201


>UniRef50_A5VF82 Transcriptional regulator, XRE family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5VF82_SPHWW
          Length = 252

 Score =  148 bits (375), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 9/181 (4%)

Query: 9   GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
           G  L   R  +GLS R  A  +GL  S +S +E  K+      L  L +  G+ + + FS
Sbjct: 40  GPALRAARLDKGLSLRELAARTGLPFSTLSKLENGKMGMTYDRLVLLAQALGVEIGKLFS 99

Query: 69  EPEKPDE------PQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPG--TTT 120
                +        + +I   +  E  S+      +     ++ +  +    +       
Sbjct: 100 TAAPDEPARGAVGRRSIIRAGEWPESSSERYRHHYLAADLLDKMMVPMIIEVEARTLEEY 159

Query: 121 GERIKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISA 179
               +H+GEE   VL G + L  +      L  G S   ++G+ H++   S G CR++S 
Sbjct: 160 RGIARHEGEEYLYVLCGAMELHSDLYAPLRLEQGDSIYFDSGMAHAYVRVSDGPCRLLSI 219

Query: 180 H 180
            
Sbjct: 220 C 220


>UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales
           RepID=B0UAQ2_METS4
          Length = 207

 Score =  148 bits (375), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 20  GLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQV- 78
           GLS +  A  +GL+   +S +E+   SP++  L +L  +  + L+  F     P EP V 
Sbjct: 38  GLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLASLFGAAPGPAEPIVT 97

Query: 79  VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI-KHQGEEIGTVLEG 137
             ++   + +   G++ +L+     +  L++      PG +TG+    H GEE G VLEG
Sbjct: 98  RPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEALTHGGEEAGLVLEG 157

Query: 138 EIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA-GICRIISAHTPT 183
            + L +      L AG S+   +  PH + N S      ++  +   
Sbjct: 158 RLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNAVP 204


>UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales
           RepID=D2PZI7_9ACTO
          Length = 200

 Score =  148 bits (375), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 4/177 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  L   R +QG+S    A  SG+    +S +E    +P I T+  L    G+ +S   
Sbjct: 14  LGVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVSALL 73

Query: 68  SEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN-GNPNRTLAMIFETYQPGTTTGERIKH 126
           SEP  P    V++   D   +    V ++++    NP     +  +  +PG        H
Sbjct: 74  SEP--PASDLVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTG-H 130

Query: 127 QGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
            G E   VL G + +T   +   L  G   A     PH +      +  ++    P 
Sbjct: 131 PGTEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEYEALDGEVRSVLLLEYPP 187


>UniRef50_Q1LD32 Transcriptional regulator, XRE family with cupin sensor domain n=2
           Tax=Cupriavidus RepID=Q1LD32_RALME
          Length = 251

 Score =  148 bits (375), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 6/181 (3%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             GKRL   R+  G +    AELSG++ + IS  E+ +++        + K   + + E 
Sbjct: 20  TFGKRLRGARKALGWTLAHLAELSGVSITTISRAERGQLALGYDNFAAIGKALQMDMGEM 79

Query: 67  FSEPEKPDEPQ---VVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGER 123
           F+   +   P    +V   +  +    Q ++ + +      + ++    T      TG  
Sbjct: 80  FAGAGETAAPFQGPIVTRANQGVVYTGQSIAYEFLCTEAAGKQMSPTVATVHARHITGPE 139

Query: 124 I--KHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
           +   H GEE   VL GE+ +   NG+   L  G S   +  + H++ + S  + R I   
Sbjct: 140 VFASHPGEEFIYVLSGEVEVHFANGEFVRLARGDSLYFDARLGHAYISVSRQLARTIGVT 199

Query: 181 T 181
           T
Sbjct: 200 T 200


>UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4
           Tax=Bacteria RepID=Q31LK1_SYNE7
          Length = 230

 Score =  148 bits (375), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G  + E+RQ+  L+    ++ +G++   +S IE  + S ++ TL++L+ V G+SLS  F
Sbjct: 25  LGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSLSALF 84

Query: 68  SEPEKPDEPQVVINQDDLIEM----GSQGVSMKLVHNGNPNR-TLAMIFETYQPGTTTGE 122
              E   E   ++ +    E+       G + +L+ +    +        T    +    
Sbjct: 85  KGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERSEPFA 144

Query: 123 RIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
             +H G E   VLEG++      Q Y L AG +    + IPH          R ++  
Sbjct: 145 AFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPHGPELLIDLPIRFLATV 202


>UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N4U4_9BACT
          Length = 193

 Score =  148 bits (375), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 6/182 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           M ++ +A G R+   R+++ ++ +  A+ +GLT   +S IE  +  P++  L  +     
Sbjct: 1   MREQLIALGTRIKMARKERKMTLQTLADRTGLTAGLLSKIENFRTIPSLPVLVDIAAALE 60

Query: 61  LSLSEFFSE---PEKPDEPQVVINQDDLIEMGSQGV-SMKLVH-NGNPNRTLAMIFETYQ 115
             L+EFF +     K     V   +   +E         +++         + M++ T  
Sbjct: 61  TDLAEFFRDMTLGSKARWLLVRPEEQKTVEREEGRHLHYRMIFETSLSAVNMQMMYVTIP 120

Query: 116 PGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175
            G+  GE +  +G+E+  +L+G     +  +   L  G +   +  +PH   N S     
Sbjct: 121 CGSG-GEPVSTEGDELLYILDGRFRYRLGDEVVELTPGDALYFDGTLPHVPENDSGAPGT 179

Query: 176 II 177
           +I
Sbjct: 180 LI 181


>UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales
           RepID=A1BBT3_PARDP
          Length = 184

 Score =  148 bits (375), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 6/182 (3%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G+ +  +R+ +G++    A   G +   +S +E+ + +P++  L ++    G+++S FF
Sbjct: 5   VGEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNISFFF 64

Query: 68  -SEPEKPDEPQVVINQDDLIEMG--SQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERI 124
            S    P+E  +V+   D   +G    G+  +L+          MI  T+ PG ++G R 
Sbjct: 65  RSSSRAPEERGLVLRAADRTPIGSQESGLVEELLSPTLSGS-FEMIKSTFAPGASSGGRR 123

Query: 125 KHQGEEIGTVL-EGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183
           K + +E G VL  G + L I  ++  L  G S+       +++ N        I   +P 
Sbjct: 124 KARPKEDGGVLISGRLTLIIGDREIQLEPGDSFQFR-ETDYAWRNDGKEPAVAIWIVSPP 182

Query: 184 TF 185
            +
Sbjct: 183 IY 184


>UniRef50_Q21W54 Transcriptional regulator, MerR family n=4 Tax=Burkholderiales
           RepID=Q21W54_RHOFD
          Length = 273

 Score =  148 bits (375), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 6/188 (3%)

Query: 2   SDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGL 61
            ++    G R    RQ+Q LS  +A++LSGL  S IST E+      +++LQ+L   Y  
Sbjct: 88  QEKTRQLGVRFRIARQKQNLSLDQASKLSGLPISFISTFERTGQGATVTSLQRLAASYNT 147

Query: 62  SLSEFFSEP---EKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
           S+++  +     EK     V  N+  +    + G+++  +     +  L     T QPG 
Sbjct: 148 SVTKLTAPEGHGEKAASCVVRNNEARVAPYFTSGITVNQLAENLES--LDCQKWTLQPGA 205

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTI-NGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
            +     H+GEE   +L+G + +TI  G+   L  G S + ++   H++         ++
Sbjct: 206 GSDGAYSHEGEEFIHILQGVLTITIDGGEQISLGEGDSISFSSQSAHAWRAVGDIPTMLL 265

Query: 178 SAHTPTTF 185
             +TP +F
Sbjct: 266 WINTPKSF 273


>UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=1 Tax=Algoriphagus
           sp. PR1 RepID=A3I2V3_9SPHI
          Length = 194

 Score =  148 bits (374), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 85/190 (44%), Gaps = 11/190 (5%)

Query: 1   MSDEG---LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLK 57
           M+      +  G ++  IR+++G      A+ SG++ + +S IE  +V P I +L +++ 
Sbjct: 1   MTSPEHLTIQIGNKIKGIRKEKGWKLGEFADKSGMSIAMLSKIENGRVIPTIPSLMQIIN 60

Query: 58  VYGLSLSEFFSE--PEKPDEPQVVINQDDLIEMGSQ----GVSMKLVHNGNPNRT-LAMI 110
              L+L++FFS+   +      +   ++D + +  +    G   +++ N   ++  + + 
Sbjct: 61  TLNLNLADFFSDLKVDGDFNGFIFRKKEDYVSLSKEEDSVGYHYQMILNFPIDKASMEIS 120

Query: 111 FETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTS 170
             T        E++   G E   +++G++   +  +   +  G S   +  +PH   NT 
Sbjct: 121 LLTLDSHAQR-EKLSTSGFEYIYLIKGKLTYELGDETLEMEEGDSLFFDGEMPHVPKNTQ 179

Query: 171 AGICRIISAH 180
           +    ++  +
Sbjct: 180 SNEAILLVVY 189


>UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VD2_BRAJA
          Length = 196

 Score =  148 bits (374), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 2/179 (1%)

Query: 4   EGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSL 63
              A G+RL  +R Q G++    A  SG++ + I  +E+ + S   + L KL     ++L
Sbjct: 9   LDRAIGRRLKTLRTQAGMTLNELAGRSGVSRAMIGRVERAQSSATAALLNKLCAALDVTL 68

Query: 64  SEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT--TG 121
           S+  +  EKP E  + +           G   +     +    + +I      G      
Sbjct: 69  SDVVALAEKPPERLMRLADQPHWRDPDSGYRRRHASPPDAASGIEIIVVDLPAGARVSYS 128

Query: 122 ERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH 180
              ++   +   +LEG + + I+ +   L  G     +     +F N +    R +   
Sbjct: 129 PWGRNAFTQQLLMLEGAVCVHIDAKTVRLRDGDCLDFDVMRAVTFENETRQDARYVIIT 187


>UniRef50_Q397M0 Transcriptional regulator, XRE family with cupin sensor domain n=1
           Tax=Burkholderia sp. 383 RepID=Q397M0_BURS3
          Length = 220

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 4/181 (2%)

Query: 7   APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEF 66
             G+RL  +RQ + L+   A++L+G+  +  S IE +K+SP    L ++++  G    + 
Sbjct: 30  QIGQRLRALRQSRDLTLNEASQLTGVPAATFSRIETNKMSPTFGVLHRIIEGMGFDWRDV 89

Query: 67  FSEPEKPDEPQVVINQDDLIEMGSQGVSMKL-VHNGNPNRTLAMIFETYQPG--TTTGER 123
            +   +      V + +D++      +  +  + + + +  +  +            G  
Sbjct: 90  LTNQPRHRNSLSVCHAEDIVTTRIANIPYEYALLHRDSSAGMITLRMQVDARTVDEAGGL 149

Query: 124 IKHQGEEIGTVLEGEIVLTIN-GQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTP 182
             H+G+E   VL GE+ L    G+   L AG+S   ++  PH++   S     ++   TP
Sbjct: 150 AGHEGDEFCYVLSGELELHFEHGEPTRLRAGESALFSSHRPHAYVAPSPEGATLLVVLTP 209

Query: 183 T 183
            
Sbjct: 210 P 210


>UniRef50_UPI0001C30FD5 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C30FD5
          Length = 205

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 25  RAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDD 84
             A  +G++ S +S +E  +    I  L +L+  YG+S++E    P   D   V  ++  
Sbjct: 44  DVARETGISASFLSLVENGRSDITIGRLTRLVDYYGISITELLPAPGGRDPDVVRADETR 103

Query: 85  LIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTIN 144
            +    +G ++ L+ +G  +RT+  +     PG +  E   H GEE   VL G + L ++
Sbjct: 104 QLHSPEEGTTIYLLASG-TDRTMLPMLLELAPGASLAESGHHAGEEFVHVLAGRLRLEVD 162

Query: 145 G-QDYHLVAGQSYAINTGIPHSFSNTS-AGICRIISAHTPT 183
           G + + L AG S    +  PH F N S     R+I   +P 
Sbjct: 163 GAEPHELDAGDSAYYKSDRPHMFRNASPDEPLRLICIDSPP 203


>UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C2L3_9CLOT
          Length = 215

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 3/184 (1%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           + D        L EIR+ + LS  + + L+ ++ S +S +E+ +V+P IST+ KL     
Sbjct: 32  LEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK 91

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETY-QPGTT 119
           + ++  F+ P+     Q    +   +        +  V +    +   +    + + G  
Sbjct: 92  VPVTA-FTAPKPTPFSQTSKAEVSPLVSDDGRYRLYPVFSFRDGQDFEIFDFEFDEGGQM 150

Query: 120 TGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG-ICRIIS 178
            G R      E  TV  G++ L    ++Y L AG S A N    + + NT  G I   I 
Sbjct: 151 AGNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIV 210

Query: 179 AHTP 182
            H P
Sbjct: 211 VHYP 214


>UniRef50_D1S464 Transcriptional regulator, XRE family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1S464_9ACTO
          Length = 214

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 8   PGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFF 67
            G R+   R+++GL+ R  A  SGL+   +S +E+   S  ++ L  + K    S+++FF
Sbjct: 28  VGGRIRRYRKERGLTLRGLASRSGLSIGFLSQVERGISSIGLTALGSVAKALDRSVADFF 87

Query: 68  SEPEKPDEPQV---------VINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGT 118
                  +  V            +    +  S   + +++ +  P+  L  +     PG 
Sbjct: 88  DAGTAAPDSTVSSLPRHFTLTRAETAATQYVSGQQTYRMLSDRGPDLVLEPMLVHIAPGG 147

Query: 119 TTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAG 172
                  H+GEE   V+ GE++  + G ++ L  G S  + + +PH   N +  
Sbjct: 148 RRENAYGHRGEEFAYVISGELLYEVEGVEHRLFPGDSVHLRSSVPHQLYNDTDA 201


>UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales
           RepID=Q1GDQ0_SILST
          Length = 187

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60
           MSDE +     L EIR   GLS  RAAEL+G++ + +  IE+ + SP I+TL K+ K + 
Sbjct: 1   MSDESITL--NLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58

Query: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120
           L L+    E  +P        +          +++K+V   +P+        + +PG + 
Sbjct: 59  LPLTALIEESTRPSG---RSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSH 115

Query: 121 GERIKHQG-EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
                  G  E   VLEG + +  +G    L  GQ    +   PH + + S G  
Sbjct: 116 ESLPHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA 170


>UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VIB7_9ACTO
          Length = 203

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 4/184 (2%)

Query: 1   MSDE-GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVY 59
           MSD  G A    +   R  +GL+    A+ SG++ + IS +E+ +  P  + L KL    
Sbjct: 1   MSDTLGAALAATVRSARAARGLTVAGLADASGVSRAMISKVERAEAQPTAALLAKLSGAL 60

Query: 60  GLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTT 119
           GL+LSE  +  E          +  L      G S + V     +  L ++      G T
Sbjct: 61  GLTLSELIARAESGPSRLTRHGEQPLWTDPDSGYSRRAVSPP-ASTGLELVQVELPAGAT 119

Query: 120 TGERIKHQG--EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177
                      ++   VL G +        + L  G    +       + N +   CR +
Sbjct: 120 VAMPASTYRFIDQQIWVLAGRLRFVEGDDVHELGQGDCLQLGAPADCVYVNPTEAPCRYL 179

Query: 178 SAHT 181
            A  
Sbjct: 180 VALY 183


>UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax=Idiomarina
           loihiensis RepID=Q5QYK8_IDILO
          Length = 191

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 1   MSDEGL-----APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKL 55
           M+D+       A  KR+   R+Q G+S    A+ + ++   +  IE+ + +P+I  L KL
Sbjct: 1   MTDKDKTAINEAIAKRVYTFRKQYGMSLDELAKNAEISKGMLVQIEKGRANPSIGILCKL 60

Query: 56  LKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQ 115
                +S+++  +  + P            +  G  G   +L+        + +   +  
Sbjct: 61  ANALAVSVADIVAVSDDPKVTIRQPQDIPTLWNGDHGGVARLLAGSKGTIMIELWRWSMF 120

Query: 116 PGTTTGERIKHQGE-EIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGIC 174
           P          +G  E+  V  G + + +N + Y L AG S      + H++ N++    
Sbjct: 121 PKEQFVSEAHSKGTIELIHVEGGCLDVLVNEETYTLSAGDSMTAEMDVAHTYQNSTNEPV 180

Query: 175 RIISAHT 181
                  
Sbjct: 181 HFTMTVY 187


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.313    0.163    0.477 

Lambda     K      H
   0.267   0.0492    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,307,696,235
Number of Sequences: 3077464
Number of extensions: 63687776
Number of successful extensions: 217822
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 15210
Number of HSP's successfully gapped in prelim test: 4856
Number of HSP's that attempted gapping in prelim test: 196765
Number of HSP's gapped (non-prelim): 20977
length of query: 185
length of database: 1,040,396,356
effective HSP length: 121
effective length of query: 64
effective length of database: 668,023,212
effective search space: 42753485568
effective search space used: 42753485568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 90 (39.0 bits)
