Phyre 2 alignment of Q5H775 with d1mkma1

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Job Description | Q5H775
Confidence | 82.54% | Date | Thu Jan 5 12:37:19 GMT 2012
Rank | 305 | Aligned Residues | 31
% Identity | 19% | Template | d1mkma1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Transcriptional regulator IclR, N-terminal domain
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | R | L | S | E | I | . | R | Q | Q | Q | G | L | S | Q | R | R | A | A | E | L | S | G | L | T | H | S | A | I | S | T | I
Query Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | I | L | D | F | I | V | K | N | P | G | D | V | S | V | S | E | I | A | E | K | F | N | M | S | V | S | N | A | Y | K | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S | S |  | B |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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