18/01/2012 08:27:42 : INFO  : Run start: Wed Jan 18 08:27:42 GMT 2012
18/01/2012 08:27:43 : INFO  : Initialised job
18/01/2012 08:27:43 : INFO  : Renaming log file 'phyre2_20120118_082742.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/197685525752e64a/phyre_20120118_082742.log'
18/01/2012 08:27:43 : INFO  : Initialised job:
Sequence
>batch____
MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
TPTTF

18/01/2012 08:27:43 : INFO  : Checked sequence
18/01/2012 08:27:43 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 08:27:43 : INFO  : PSI-BLAST 3 iterations
18/01/2012 08:29:11 : INFO  : PSI-BLAST 5 iterations
18/01/2012 08:31:13 : INFO  : Finished PSI-BLAST
18/01/2012 08:31:13 : INFO  : Running Buildali to generate a3m file
18/01/2012 09:50:17 : INFO  : Converting to HMM
18/01/2012 09:50:19 : INFO  : Calibrating HMM
18/01/2012 09:50:24 : INFO  : Searching HMM database
18/01/2012 09:53:56 : INFO  : Finished buildali
18/01/2012 09:53:56 : INFO  : Predicting secondary structure
18/01/2012 09:53:56 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 09:53:56 : INFO  : Predicting Disordered regions
18/01/2012 09:53:56 : INFO  : Predicted Disorder (Disopred)
18/01/2012 09:53:56 : INFO  : Running memsat_svm check
18/01/2012 09:55:09 : INFO  : Globular protein
18/01/2012 09:55:09 : INFO  : Predicted Transmembrane (memsat_svm) ID '197685525752e64a'
18/01/2012 09:55:09 : INFO  : Initialising fold library search
18/01/2012 09:55:09 : INFO  : Initialised search input
18/01/2012 09:55:09 : INFO  : Building Ensemble models
18/01/2012 09:55:09 : INFO  : Building hh.c2bnoA_.model.1.pdb
18/01/2012 09:55:10 : INFO  : Building hh.c1y9qA_.model.2.pdb
18/01/2012 09:55:10 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/197685525752e64a/hh.c1y9qA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/197685525752e64a/c1y9qA_.2.pdb
18/01/2012 09:55:10 : INFO  : Building c2bnoA_.1.pdb
18/01/2012 09:55:10 : INFO  : Building c1y9qA_.2.pdb
18/01/2012 09:55:11 : INFO  : Building c3ivpD_.3.pdb
18/01/2012 09:55:11 : INFO  : Building d2bnma2.4.pdb
18/01/2012 09:55:13 : INFO  : Building c2kpjA_.5.pdb
18/01/2012 09:55:13 : INFO  : Building c3op9A_.6.pdb
18/01/2012 09:55:14 : INFO  : Building c2ewtA_.7.pdb
18/01/2012 09:55:14 : INFO  : Building d1y9qa2.8.pdb
18/01/2012 09:55:14 : INFO  : Building d1y7ya1.9.pdb
18/01/2012 09:55:14 : INFO  : Building c3lisB_.10.pdb
18/01/2012 09:55:15 : INFO  : Building c3clcC_.11.pdb
18/01/2012 09:55:15 : INFO  : Building c1b0nA_.12.pdb
18/01/2012 09:55:15 : INFO  : Building d1y9qa1.13.pdb
18/01/2012 09:55:16 : INFO  : Building d2b5aa1.14.pdb
18/01/2012 09:55:16 : INFO  : Building c3f52A_.15.pdb
18/01/2012 09:55:16 : INFO  : Building c3mlfC_.16.pdb
18/01/2012 09:55:16 : INFO  : Building d1x57a1.17.pdb
18/01/2012 09:55:17 : INFO  : Building c3b7hA_.18.pdb
18/01/2012 09:55:19 : INFO  : Building d1rioa_.19.pdb
18/01/2012 09:55:19 : INFO  : Building c3f6wE_.20.pdb
18/01/2012 09:55:21 : INFO  : Finished HH model building
18/01/2012 09:55:21 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 09:55:24 : INFO  : html domain output complete ID '197685525752e64a'
18/01/2012 10:03:54 : INFO  : Run end  : Wed Jan 18 10:03:54 GMT 2012
