Phyre 2 alignment of Q5H775 with c1u78A_

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Job Description | Q5H775
Confidence | 88.81% | Date | Thu Jan 5 12:37:19 GMT 2012
Rank | 245 | Aligned Residues | 30
% Identity | 10% | Template | c1u78A_
PDB info | PDB header:dna binding protein/dna | Chain: A: PDB Molecule:transposable element tc3 transposase; | PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution | 2.69 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | R | L | S | E | I | R | Q | Q | Q | G | L | S | Q | R | R | A | A | E | L | S | G | L | T | H | S | A | I | S | T | I
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Template Sequence |  | A | Q | L | D | V | M | K | L | L | . | N | V | S | L | H | E | M | S | R | K | I | S | R | S | R | H | C | I | R | V | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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