21 c3cjpA_ Probab=99.96   E-value=9e-28  Score=180.05  Aligned_columns=220  Identities=15%

Q ss_pred             CEEEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEECCCH----------------------------------HHH
Q ss_conf             1599973378734420218999999999977998999916997----------------------------------779
Q batch____         2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL----------------------------------PGY   47 (265)
Q Consensus         2 ~iID~H~H~~~~~~~~~~~d~~~~l~~~~~~GI~~~v~~~~~~----------------------------------~~~   47 (265)
                      ||||+|+|++++        .+..++.|++.||++.++.+...                                  ..+
T Consensus         1 MIID~H~Hl~~~--------~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (262)
T c3cjpA_           1 LIIDGHTHVILP--------VEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSI   72 (262)
T ss_dssp             CCEEEEEECCSS--------HHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHH
T ss_pred             CEEEEEEECCCC--------HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCCCCCCHHHH
T ss_conf             968998502697--------899999999769956998358788578310899998422203551663065322213678


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             99999997405872464642588889667999999975224332441210002367761320399999999999729779
Q batch____        48 LHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPV  127 (265)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv  127 (265)
                      +.+.+.+..++.++......+.........++........++.+.+.        ......+++.+.++++.|.+.+.++
T Consensus        73 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gi~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  144 (262)
T c3cjpA_          73 KELTNVIQAYPSRYVGFGNVPVGLSENDTNSYIEENIVNNKLVGIGE--------LTPASGQIKSLKPIFKYSMDSGSLP  144 (262)
T ss_dssp             HHHHHHHHHSTTTEEEEECCCTTCCHHHHHHHHHHHTTTTTCSEEEE--------ECCCTTCGGGGHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEE--------CCCCCCCCHHHHHHHHHHHHCCCCE
T ss_conf             99999976302750022021257880689999999712487508984--------5887678853899999999649955


Q ss_pred             EEEC-----CCCHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHHHHHH--CCCEEEECCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf             9936-----9855899999996299887499818999-9899999995--896784154335478378999997168520
Q batch____       128 IVHT-----RDARADTLAILREEKVTDCGGVLHCFTE-DRETAGKLLD--LGFYISFSGIVTFRNAEQLRDAARYVPLDR  199 (265)
Q Consensus       128 ~iH~-----~~~~~~~~~~l~~~~~p~~~ii~~h~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dr  199 (265)
                      .+|.     ....++.++.+.+. +|++++|+.|+|+ .+....+++.  .|+|++++....    ..+.++++..|+||
T Consensus       145 ~~~h~~~~~~~~~~~~~~~~~~~-~P~~~~i~~H~g~~~~~~~~~~l~~~~n~y~d~s~~~~----~~~~~~~~~~g~dr  219 (262)
T c3cjpA_         145 IWIHAFNPLVLQDIKEIAELCKA-FPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFS----TFVLKIVINELPLK  219 (262)
T ss_dssp             EEECCSTTCCHHHHHHHHHHHHH-STTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSC----HHHHHHHHHHSTTT
T ss_pred             EEEECCCCCCCCCHHHHHHHHHH-CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCH----HHHHHHHHHHCCCE
T ss_conf             99926887775898999999996-89985899628877889999999604556170122688----99999998509231


Q ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             899428987652000377587889999999999861999899999997969998198
Q batch____       200 LLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHI  256 (265)
Q Consensus       200 ilfgSD~p~~~~~~~~~~~~~~~~l~~~~~~l~~~~gl~~e~~~~i~~~Na~rl~~L  256 (265)
                      +|||||||+..          +....+.++.+    ++++|++++|+++||+|+|||
T Consensus       220 il~GSD~P~~~----------~~~~~~~~~~~----~l~~~~~~~i~~~Na~rl~~l  262 (262)
T c3cjpA_         220 CIFGTDMPFGD----------LQLSIEAIKKM----SNDSYVANAVLGDNISRLLNI  262 (262)
T ss_dssp             EECCCCTTSSC----------HHHHHHHHHHH----CSSHHHHHHHHTHHHHHHHTC
T ss_pred             EEEECCCCCCC----------HHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHCC
T ss_conf             99903868999----------89999999947----989899999971339999585