18/01/2012 21:49:15 : INFO  : Run start: Wed Jan 18 21:49:13 GMT 2012
18/01/2012 21:49:26 : INFO  : Initialised job
18/01/2012 21:49:30 : INFO  : Renaming log file 'phyre2_20120118_214912.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/194d8d22af977959/phyre_20120118_214912.log'
18/01/2012 21:49:32 : INFO  : Initialised job:
Sequence
>batch____
MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPD
LVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKI
ARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ
DSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEV
QSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGN
PLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFND
PQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS
D

18/01/2012 21:49:34 : INFO  : Checked sequence
18/01/2012 21:49:41 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 21:49:43 : INFO  : PSI-BLAST 3 iterations
18/01/2012 21:52:26 : INFO  : PSI-BLAST 5 iterations
18/01/2012 21:55:26 : INFO  : Finished PSI-BLAST
18/01/2012 21:55:31 : INFO  : Running Buildali to generate a3m file
18/01/2012 22:19:20 : INFO  : Converting to HMM
18/01/2012 22:19:29 : INFO  : Calibrating HMM
18/01/2012 22:19:52 : INFO  : Searching HMM database
18/01/2012 22:27:03 : INFO  : Finished buildali
18/01/2012 22:27:06 : INFO  : Predicting secondary structure
18/01/2012 22:27:21 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 22:27:24 : INFO  : Predicting Disordered regions
18/01/2012 22:27:32 : INFO  : Predicted Disorder (Disopred)
18/01/2012 22:27:35 : INFO  : Running memsat_svm check
18/01/2012 22:32:57 : INFO  : Globular protein
18/01/2012 22:32:59 : INFO  : Predicted Transmembrane (memsat_svm) ID '194d8d22af977959'
18/01/2012 22:33:03 : INFO  : Initialising fold library search
18/01/2012 22:33:09 : INFO  : Initialised search input
18/01/2012 22:33:14 : INFO  : Building Ensemble models
18/01/2012 22:33:21 : INFO  : Building hh.d1sffa_.model.1.pdb
18/01/2012 22:33:52 : INFO  : Building c3oksB_.1.pdb
18/01/2012 22:34:20 : INFO  : Building d1sffa_.2.pdb
18/01/2012 22:34:46 : INFO  : Building c3fcrA_.3.pdb
18/01/2012 22:35:14 : INFO  : Building c3n5mD_.4.pdb
18/01/2012 22:35:44 : INFO  : Building c3hmuA_.5.pdb
18/01/2012 22:36:12 : INFO  : Building d1s0aa_.6.pdb
18/01/2012 22:36:41 : INFO  : Building d1zoda1.7.pdb
18/01/2012 22:37:10 : INFO  : Building c3lv2A_.8.pdb
18/01/2012 22:37:40 : INFO  : Building c3i5tB_.9.pdb
18/01/2012 22:38:11 : INFO  : Building c3bv0A_.10.pdb
18/01/2012 22:38:40 : INFO  : Building c3dxvA_.11.pdb
18/01/2012 22:39:09 : INFO  : Building d1ohwa_.12.pdb
18/01/2012 22:39:39 : INFO  : Building c2eo5A_.13.pdb
18/01/2012 22:40:09 : INFO  : Building c2e7uA_.14.pdb
18/01/2012 22:40:40 : INFO  : Building d2gsaa_.15.pdb
18/01/2012 22:41:10 : INFO  : Building c2cjdA_.16.pdb
18/01/2012 22:41:40 : INFO  : Building c3bs8A_.17.pdb
18/01/2012 22:42:09 : INFO  : Building c3a8uX_.18.pdb
18/01/2012 22:42:38 : INFO  : Building d2byla1.19.pdb
18/01/2012 22:43:08 : INFO  : Building c2zsmA_.20.pdb
18/01/2012 22:44:11 : INFO  : Finished HH model building
18/01/2012 22:44:14 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 22:45:23 : INFO  : html domain output complete ID '194d8d22af977959'
19/01/2012 02:14:29 : INFO  : Run end  : Thu Jan 19 02:14:27 GMT 2012
