BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (111 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriac... 231 4e-60 UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus Rep... 91 2e-17 UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella dranc... 73 3e-12 UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B... 71 9e-12 UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organis... 70 2e-11 UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=B... 66 3e-10 UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepI... 65 5e-10 UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales Re... 63 3e-09 UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepI... 55 7e-07 UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 53 2e-06 UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphapro... 52 8e-06 UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=J... 49 7e-05 UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=... 46 4e-04 UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n... 45 5e-04 UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmone... 45 6e-04 UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactoba... 44 0.002 UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=B... 42 0.005 UniRef50_A9D138 Transcriptional regulator, AbrB family protein n... 41 0.010 UniRef50_B9JRI7 Regulators of stationary/sporulation gene expres... 39 0.041 >UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriaceae RepID=SOHA_ECOLI Length = 111 Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE Sbjct: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 Query: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE Sbjct: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 >UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus RepID=Q7N0E7_PHOLL Length = 116 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 5/104 (4%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE-DHTMNAFLR 71 ESK+T R QTTIP VR+ALKLKPG DSI Y+IL G V + R E+E D M +FL Sbjct: 13 AESKLTSRSQTTIPTSVRKALKLKPGHDSIAYKILSSGDVLISRKNSEEEKDLVMESFLD 72 Query: 72 FLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEI-GDDE 111 FL DI+ +P + + + I Q K L+AG+D+++ + + DDE Sbjct: 73 FLAKDIRRHPGQVQQLDEQLINQAKSLIAGIDIDLSNPLSADDE 116 >UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MXM3_9GAMM Length = 124 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 4/105 (3%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +L TES +T R QTTIP VR+AL L +D I Y + P G VF+ ++ + Q+D ++ F Sbjct: 4 LLQTESTLTDRYQTTIPDAVRKALHLN-KRDKILYTVQPDGHVFLSKIEENQDDPIIDNF 62 Query: 70 LRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 L F+ DI+NNPQ N + + LV G++ ++++ + DDE Sbjct: 63 LEFIAEDIRNNPQHLTSINQTLFNRIESLVNGVEFDLNEMLLDDE 107 >UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B7J9L1_ACIF2 Length = 109 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 6/108 (5%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDH-TMN 67 A L ES +T R QTT+P VR AL+L +D IHY I PGG+V + R D +ED + Sbjct: 3 ATLEVESTLTDRYQTTVPETVRRALRLGK-RDKIHYTIRPGGEVVLTRAEDSEEDDPVLG 61 Query: 68 AFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEI-GDDE 111 FL FL DI +P++ + + +Q+ + L G++V++D + DDE Sbjct: 62 QFLGFLARDIATHPERLQAIDVSFVQRLQSLTGGIEVDLDAPLSADDE 109 >UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organisms RepID=B4RY94_ALTMD Length = 109 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 4/108 (3%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTM 66 +H L TES +T R QTT+P+ VR+AL+L +D I Y I G V + R+ ++ D + Sbjct: 2 AHVALETESTLTDRFQTTVPSSVRQALRLG-KKDKIKYAIQSDGSVVISRVASQESDPVI 60 Query: 67 NAFLRFLDADIQNNPQKTRPFNIQQGKK---LVAGMDVNIDDEIGDDE 111 FL F+ D+Q +P+K P + + LV G+++++D + D++ Sbjct: 61 GEFLSFIARDMQTHPEKLEPLSASMRESVNTLVHGVEIDLDAPLLDED 108 >UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=Bacteria RepID=Q88NE4_PSEPK Length = 129 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 A ES +T R QTT+P VR AL LK +D IHY I P G V + R ++D + Sbjct: 24 ATFDVESTLTDRYQTTVPETVRRALGLKK-RDKIHYSIRPDGGVILTRAEATEDDPVLGK 82 Query: 69 FLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL FL DI NPQ+ + + I + KLV +V++D + D+ Sbjct: 83 FLDFLAHDIATNPQRLQVVDAGLIARLDKLVGDAEVDLDQPLSADD 128 >UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepID=A8LU31_DINSH Length = 108 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 SK+T R QTT+PA VR+ LKL G D I Y P G+V++ + ++ED + AFL F++ Sbjct: 9 SKLTDRYQTTVPAGVRKQLKLGKG-DQIRYCTEPSGRVYIEPVRSDEEDPVLGAFLDFVE 67 Query: 75 ADIQNNPQKTRPFNIQQGKKLVAGM-DVNID 104 ADI+ +P + R F+ +L A + DV++D Sbjct: 68 ADIKAHPDRIRAFDGALHDRLAALVGDVDVD 98 >UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales RepID=B7KM74_CYAP7 Length = 110 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 +ES +T R QTTIP +R+ L LK D I Y IL GQV + R + D + FL F Sbjct: 9 SESTLTKRYQTTIPESIRKVLGLK-KHDKICYTILEDGQVTISRAAQTENDPILENFLVF 67 Query: 73 LDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 L +++ NPQ + + + K LVA +D+++D + D++ Sbjct: 68 LAQELKKNPQHLQGISANLVSHLKSLVADVDLDLDAPLSDED 109 >UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepID=B6JK06_OLICO Length = 113 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%) Query: 5 ARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE--QE 62 A++ +L + +T RGQTT+PA +R+ L L +D + + L G V + + + Sbjct: 2 AKAAEILEIPATITDRGQTTVPAAIRKMLALGK-RDQVVFRGLADGTVMISKKETRAPEG 60 Query: 63 DHTMNAFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 D + FL FL D+ N P + RP + +GK LV G+ V++ + DD+ Sbjct: 61 DPVIGKFLDFLARDMTNEPGRIRPVPKSLVARGKGLVKGIRVDLGAALPDDD 112 >UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 Length = 103 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE----DHTMNAFL 70 S +T + QTTIP VR+AL L+ QD I + +L GGQV + + E+E D + FL Sbjct: 9 STMTSKNQTTIPESVRKALGLEK-QDKIRFSVLGGGQVLLEKNNTEEEEFEHDPVVGKFL 67 Query: 71 RFLDADIQNNPQKTRP 86 FL+ + NP +P Sbjct: 68 HFLENSMTKNPNSIKP 83 >UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphaproteobacteria RepID=C7JID8_ACEP3 Length = 110 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +L ES +T +GQTTIP VR+AL + G I + + +V + + +E D + F Sbjct: 4 LLKAESTITAKGQTTIPKSVRKALGVDYGG-RIAFVVDDQRRVHVEKATEETSDPVVERF 62 Query: 70 LRFLDADIQNNPQKTRPFNI-----QQGKKLVAGMDVNIDDEIGDD 110 L FL+ D+ ++ ++R N+ + LV MDV++DDEI D Sbjct: 63 LEFLEKDMLDH-SRSRLVNLPASLPDRVAALVGNMDVDLDDEIEGD 107 >UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MY6_JANSC Length = 79 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 S++T +GQTT+P VR+AL LKPG D +HY +LP G V M Sbjct: 3 HSRITSKGQTTVPKEVRQALGLKPG-DLVHYIVLPSGDVRMI 43 >UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=Proteobacteria RepID=Q13VW0_BURXL Length = 128 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 12/109 (11%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPA H V T SK GQ T+P P+R+AL + G + ++ L G +V + R+ E Sbjct: 24 MPA---IHEVATLTSK----GQITLPKPIRQALGVDAG-GKLAFD-LRGSEVVVTRVDAE 74 Query: 61 QEDHTMNAFLRFLDADIQ--NNPQKTRPFNIQQGKKLVAGMDVNIDDEI 107 ED + AFL L DI+ N Q P ++ + AG VN+ +EI Sbjct: 75 HEDPAIGAFLSLLARDIEAGRNVQGL-PEDLARAMLEHAGHSVNLGEEI 122 >UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S601_SALRD Length = 98 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 2/44 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 S +T RGQTTIP P+REAL L+PG D + + IL G +V + R G Sbjct: 4 STLTTRGQTTIPKPIREALGLQPG-DRVEF-ILHGDRVLLRRAG 45 >UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4ABX3_SALNE Length = 76 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 68 AFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 FL F+ DI PQ PF++ +G++LVA M VNIDD+I D+ Sbjct: 33 TFLGFISNDINEFPQNVLPFDMSRGRELVADMGVNIDDDICDE 75 >UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=Q8GAS3_LACPL Length = 88 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 8/60 (13%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR-------LGDEQE 62 V SK+T + Q TIP VRE LK++ D+I ++I P G+V + R L DEQE Sbjct: 7 VTKVSSKITSKNQITIPKTVRELLKVR-STDTIEWQIEPNGKVMIVRSKPDLWQLVDEQE 65 >UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=Betaproteobacteria RepID=C7RTQ9_9PROT Length = 72 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFM 54 + TE+ +T +GQTTIP +R++L++K G D + + ++P G V M Sbjct: 1 MATEATLTSKGQTTIPKEIRDSLRMKAG-DRMTFTLMPDGTVVM 43 >UniRef50_A9D138 Transcriptional regulator, AbrB family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D138_9RHIZ Length = 88 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFM 54 + ESK+T +GQTTIP VRE LK+ G D I YE + G V + Sbjct: 1 MGVESKITAKGQTTIPMEVREYLKVGVG-DRIGYEFVDGKVVLV 43 >UniRef50_B9JRI7 Regulators of stationary/sporulation gene expression protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JRI7_AGRVS Length = 102 Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFM 54 +S +T +GQTTIPA +R+ L LKPG D + Y + G +V++ Sbjct: 5 DSTITSKGQTTIPAEIRDMLGLKPG-DKVRY-VTQGNRVYL 43 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriac... 158 4e-38 UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=B... 129 3e-29 UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organis... 125 3e-28 UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B... 125 4e-28 UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales Re... 123 2e-27 UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella dranc... 122 3e-27 UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus Rep... 119 3e-26 UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepI... 119 3e-26 UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepI... 114 7e-25 UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphapro... 102 4e-21 UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 100 2e-20 UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=... 98 1e-19 UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmone... 60 2e-08 UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactoba... 57 2e-07 UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=J... 57 2e-07 UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n... 53 2e-06 Sequences not found previously or not previously below threshold: UniRef50_B6IWT3 Putative uncharacterized protein n=1 Tax=Rhodosp... 66 3e-10 UniRef50_A7IQ61 Putative uncharacterized protein n=2 Tax=Rhizobi... 56 4e-07 UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=B... 51 9e-06 UniRef50_B9JRI7 Regulators of stationary/sporulation gene expres... 50 2e-05 UniRef50_B2GF59 Putative uncharacterized protein n=1 Tax=Lactoba... 50 2e-05 UniRef50_A2SP91 Transcriptional regulator, AbrB family n=1 Tax=M... 49 5e-05 UniRef50_A9A0K1 Transcriptional regulator, AbrB family n=1 Tax=D... 48 6e-05 UniRef50_C9AZZ6 Predicted protein n=3 Tax=Enterococcus casselifl... 48 7e-05 UniRef50_Q1NTN6 Transcriptional regulator AbrB n=3 Tax=Bacteria ... 48 1e-04 UniRef50_A1HMB3 Transcriptional regulator, AbrB family n=1 Tax=T... 48 1e-04 UniRef50_UPI0001903C04 AbrB family transcriptional regulator n=1... 47 1e-04 UniRef50_A4JA89 Transcriptional regulator, AbrB family n=1 Tax=B... 47 2e-04 UniRef50_D1C4M8 Transcriptional regulator, AbrB family n=1 Tax=S... 47 2e-04 UniRef50_B8GQR7 AbrB family transcriptional regulator n=2 Tax=Ba... 47 2e-04 UniRef50_B4WB31 SpoVT / AbrB like domain protein n=1 Tax=Brevund... 47 2e-04 UniRef50_B4SH74 Transcriptional regulator, AbrB family n=3 Tax=C... 47 3e-04 UniRef50_A8IKJ3 Putative transcriptional regulator n=1 Tax=Azorh... 47 3e-04 UniRef50_C1F8G8 Transcriptional regulator, AbrB family n=1 Tax=A... 46 3e-04 UniRef50_A4BR24 Putative uncharacterized protein n=1 Tax=Nitroco... 46 4e-04 UniRef50_A9D138 Transcriptional regulator, AbrB family protein n... 46 4e-04 UniRef50_A6FMC9 Transcriptional regulator, AbrB family protein n... 45 6e-04 UniRef50_B1YFZ1 Transcriptional regulator, AbrB family n=1 Tax=E... 45 6e-04 UniRef50_B2JT84 Transcriptional regulator, AbrB family n=1 Tax=B... 45 7e-04 UniRef50_A5VG03 Transcriptional regulator, AbrB family n=2 Tax=P... 45 9e-04 UniRef50_D2M9W9 Transcriptional regulator, AbrB family n=1 Tax=R... 45 9e-04 UniRef50_A7HQV0 Transcriptional regulator, AbrB family n=1 Tax=P... 45 0.001 UniRef50_A1VWC3 Transcriptional regulator, AbrB family n=1 Tax=P... 45 0.001 UniRef50_B1I0L1 Putative uncharacterized protein n=1 Tax=Lysinib... 44 0.001 UniRef50_B3EQR0 Transcriptional regulator, AbrB family n=2 Tax=C... 44 0.001 UniRef50_B1XZE7 Transcriptional regulator, AbrB family n=6 Tax=B... 44 0.001 UniRef50_B8GLG7 Putative uncharacterized protein n=1 Tax=Thioalk... 44 0.001 UniRef50_C8WTC8 Transcriptional regulator, AbrB family n=3 Tax=A... 44 0.002 UniRef50_Q3J855 Transcriptional regulator, AbrB family n=5 Tax=P... 44 0.002 UniRef50_Q6MR51 Putative uncharacterized protein n=1 Tax=Bdellov... 43 0.003 UniRef50_Q1MDL1 Putative uncharacterized protein n=3 Tax=Proteob... 43 0.003 UniRef50_B5INF0 Transcriptional regulator, AbrB family protein n... 42 0.004 UniRef50_B3Q5K6 Hypothetical conserved protein n=2 Tax=Rhizobium... 42 0.004 UniRef50_Q73RP8 Transcriptional regulator, AbrB family n=1 Tax=T... 42 0.004 UniRef50_D2PF52 Transcriptional regulator, AbrB family n=6 Tax=S... 42 0.005 UniRef50_C7T7Z6 Transcriptional regulator, AbrB family n=6 Tax=L... 42 0.005 UniRef50_Q216J9 Transcriptional regulator, AbrB family n=4 Tax=R... 42 0.005 UniRef50_C6LC19 Toxin-antitoxin system, antitoxin component, Abr... 42 0.006 UniRef50_Q210F7 Transcriptional regulator, AbrB family n=2 Tax=R... 42 0.007 UniRef50_C9RXL6 Transcriptional regulator, AbrB family n=2 Tax=G... 42 0.007 UniRef50_Q3J9J2 Transcriptional regulator, AbrB family n=5 Tax=B... 42 0.007 UniRef50_B2SVA5 SpoVT / AbrB like domain protein n=17 Tax=Proteo... 42 0.008 UniRef50_B1I1W7 Transcriptional regulator, AbrB family n=1 Tax=C... 42 0.009 UniRef50_B9MMB7 Transcriptional regulator, AbrB family n=7 Tax=C... 41 0.012 UniRef50_A1BGZ2 Transcriptional regulator, AbrB family n=2 Tax=C... 41 0.014 UniRef50_Q5KXG5 Hypothetical conserved protein n=1 Tax=Geobacill... 41 0.014 UniRef50_B5YIC5 SpoVT / AbrB like domain protein n=1 Tax=Thermod... 40 0.017 UniRef50_C7P402 Transcriptional regulator, AbrB family n=1 Tax=H... 40 0.022 UniRef50_C0GTY3 Transcriptional regulator, AbrB family n=1 Tax=D... 40 0.023 UniRef50_A3JJF9 Putative uncharacterized protein n=1 Tax=Marinob... 40 0.027 UniRef50_UPI0001C31534 transcriptional regulator, AbrB family n=... 40 0.027 UniRef50_A6DSW9 Transcriptional regulator, AbrB family protein n... 40 0.029 UniRef50_B3QXW1 Transcriptional regulator, AbrB family n=1 Tax=C... 40 0.031 UniRef50_A7HWC1 Transcriptional regulator, AbrB family n=4 Tax=R... 40 0.032 UniRef50_C5D932 Transcriptional regulator, AbrB family n=1 Tax=G... 40 0.032 UniRef50_B2IWV2 Transcriptional regulator, AbrB family n=3 Tax=C... 40 0.033 UniRef50_C8S823 Transcriptional regulator, AbrB family n=4 Tax=E... 39 0.038 UniRef50_D2UA83 Putative uncharacterized protein n=1 Tax=Xanthom... 39 0.045 UniRef50_Q2RKN2 Transcriptional regulator, AbrB family n=2 Tax=C... 39 0.050 UniRef50_C0GFP3 Transcriptional regulator, AbrB family n=1 Tax=D... 39 0.057 UniRef50_A5G781 Transcriptional regulator, AbrB family n=1 Tax=G... 38 0.070 UniRef50_Q0W2F1 Putative uncharacterized protein n=1 Tax=uncultu... 38 0.075 UniRef50_B7R4T0 Transcriptional regulator, AbrB family protein n... 38 0.092 UniRef50_A1B6W4 Transcriptional regulator, AbrB family n=2 Tax=A... 38 0.094 >UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriaceae RepID=SOHA_ECOLI Length = 111 Score = 158 bits (400), Expect = 4e-38, Method: Composition-based stats. Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE Sbjct: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 Query: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE Sbjct: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 >UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=Bacteria RepID=Q88NE4_PSEPK Length = 129 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 4/107 (3%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 A ES +T R QTT+P VR AL LK +D IHY I P G V + R ++D + Sbjct: 23 AATFDVESTLTDRYQTTVPETVRRALGLKK-RDKIHYSIRPDGGVILTRAEATEDDPVLG 81 Query: 68 AFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL FL DI NPQ+ + + I + KLV +V++D + D+ Sbjct: 82 KFLDFLAHDIATNPQRLQVVDAGLIARLDKLVGDAEVDLDQPLSADD 128 >UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organisms RepID=B4RY94_ALTMD Length = 109 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 4/108 (3%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTM 66 +H L TES +T R QTT+P+ VR+AL+L D I Y I G V + R+ ++ D + Sbjct: 2 AHVALETESTLTDRFQTTVPSSVRQALRLGKK-DKIKYAIQSDGSVVISRVASQESDPVI 60 Query: 67 NAFLRFLDADIQNNPQKTRPFNIQQGKK---LVAGMDVNIDDEIGDDE 111 FL F+ D+Q +P+K P + + LV G+++++D + D++ Sbjct: 61 GEFLSFIARDMQTHPEKLEPLSASMRESVNTLVHGVEIDLDAPLLDED 108 >UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B7J9L1_ACIF2 Length = 109 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD-EQEDHTM 66 A L ES +T R QTT+P VR AL+L +D IHY I PGG+V + R D E++D + Sbjct: 2 AATLEVESTLTDRYQTTVPETVRRALRLGK-RDKIHYTIRPGGEVVLTRAEDSEEDDPVL 60 Query: 67 NAFLRFLDADIQNNPQKTRPFNIQ---QGKKLVAGMDVNIDDEIGDDE 111 FL FL DI +P++ + ++ + + L G++V++D + D+ Sbjct: 61 GQFLGFLARDIATHPERLQAIDVSFVQRLQSLTGGIEVDLDAPLSADD 108 >UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales RepID=B7KM74_CYAP7 Length = 110 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 +ES +T R QTTIP +R+ L LK D I Y IL GQV + R + D + FL F Sbjct: 9 SESTLTKRYQTTIPESIRKVLGLKK-HDKICYTILEDGQVTISRAAQTENDPILENFLVF 67 Query: 73 LDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 L +++ NPQ + + + K LVA +D+++D + D++ Sbjct: 68 LAQELKKNPQHLQGISANLVSHLKSLVADVDLDLDAPLSDED 109 >UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MXM3_9GAMM Length = 124 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 4/105 (3%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +L TES +T R QTTIP VR+AL L +D I Y + P G VF+ ++ + Q+D ++ F Sbjct: 4 LLQTESTLTDRYQTTIPDAVRKALHLNK-RDKILYTVQPDGHVFLSKIEENQDDPIIDNF 62 Query: 70 LRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 L F+ DI+NNPQ N + + LV G++ ++++ + DDE Sbjct: 63 LEFIAEDIRNNPQHLTSINQTLFNRIESLVNGVEFDLNEMLLDDE 107 >UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus RepID=Q7N0E7_PHOLL Length = 116 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 4/103 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE-DHTMNAFLR 71 ESK+T R QTTIP VR+ALKLKPG DSI Y+IL G V + R E+E D M +FL Sbjct: 13 AESKLTSRSQTTIPTSVRKALKLKPGHDSIAYKILSSGDVLISRKNSEEEKDLVMESFLD 72 Query: 72 FLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL DI+ +P + + + I Q K L+AG+D+++ + + D+ Sbjct: 73 FLAKDIRRHPGQVQQLDEQLINQAKSLIAGIDIDLSNPLSADD 115 >UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepID=B6JK06_OLICO Length = 113 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%) Query: 5 ARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE--QE 62 A++ +L + +T RGQTT+PA +R+ L L +D + + L G V + + + Sbjct: 2 AKAAEILEIPATITDRGQTTVPAAIRKMLALGK-RDQVVFRGLADGTVMISKKETRAPEG 60 Query: 63 DHTMNAFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 D + FL FL D+ N P + RP + +GK LV G+ V++ + DD+ Sbjct: 61 DPVIGKFLDFLARDMTNEPGRIRPVPKSLVARGKGLVKGIRVDLGAALPDDD 112 >UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepID=A8LU31_DINSH Length = 108 Score = 114 bits (286), Expect = 7e-25, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 A+ SK+T R QTT+PA VR+ LKL G D I Y P G+V++ + ++ED + A Sbjct: 3 ALAQDVSKLTDRYQTTVPAGVRKQLKLGKG-DQIRYCTEPSGRVYIEPVRSDEEDPVLGA 61 Query: 69 FLRFLDADIQNNPQKTRPFNIQ---QGKKLVAGMDVNIDDEIGDDE 111 FL F++ADI+ +P + R F+ + LV +DV++D + ++ Sbjct: 62 FLDFVEADIKAHPDRIRAFDGALHDRLAALVGDVDVDLDAPLSLED 107 >UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphaproteobacteria RepID=C7JID8_ACEP3 Length = 110 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +L ES +T +GQTTIP VR+AL + G I + + +V + + +E D + F Sbjct: 4 LLKAESTITAKGQTTIPKSVRKALGVDYG-GRIAFVVDDQRRVHVEKATEETSDPVVERF 62 Query: 70 LRFLDADIQNNPQKTRPFNI-----QQGKKLVAGMDVNIDDEIGDD 110 L FL+ D+ ++ ++R N+ + LV MDV++DDEI D Sbjct: 63 LEFLEKDMLDH-SRSRLVNLPASLPDRVAALVGNMDVDLDDEIEGD 107 >UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 Length = 103 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE----DHT 65 + S +T + QTTIP VR+AL L+ QD I + +L GGQV + + E+E D Sbjct: 4 IFDAVSTMTSKNQTTIPESVRKALGLEK-QDKIRFSVLGGGQVLLEKNNTEEEEFEHDPV 62 Query: 66 MNAFLRFLDADIQNNPQKTRPFNIQQGKKL 95 + FL FL+ + NP +P + + +L Sbjct: 63 VGKFLHFLENSMTKNPNSIKPTSQSRFNRL 92 >UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=Proteobacteria RepID=Q13VW0_BURXL Length = 128 Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 12/112 (10%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPA H V + +T +GQ T+P P+R+AL + G + ++ L G +V + R+ E Sbjct: 24 MPA---IHEV----ATLTSKGQITLPKPIRQALGVDAG-GKLAFD-LRGSEVVVTRVDAE 74 Query: 61 QEDHTMNAFLRFLDADIQ--NNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 ED + AFL L DI+ N Q P ++ + AG VN+ +EI + Sbjct: 75 HEDPAIGAFLSLLARDIEAGRNVQGL-PEDLARAMLEHAGHSVNLGEEIDGE 125 >UniRef50_B6IWT3 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IWT3_RHOCS Length = 108 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 VT +GQTT+P +R+ L + P I ++ + + +E D + AFL + A Sbjct: 12 TVTSKGQTTLPLAIRQLLGV-PDGGRIRVRTEE-RRIVLEAVEEEHTDPAIGAFLAMMAA 69 Query: 76 DIQNNPQKTRPFNI-QQGKKLVAGMDVNIDDEIGDD 110 DI + P ++ ++ + G++V++D I D Sbjct: 70 DIAAGRVERLPDDLTDALRQALDGIEVDLDAPIEGD 105 >UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4ABX3_SALNE Length = 76 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 68 AFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 FL F+ DI PQ PF++ +G++LVA M VNIDD+I D+ Sbjct: 33 TFLGFISNDINEFPQNVLPFDMSRGRELVADMGVNIDDDICDE 75 >UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=Q8GAS3_LACPL Length = 88 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 V SK+T + Q TIP VRE LK++ D+I ++I P G+V + R Sbjct: 7 VTKVSSKITSKNQITIPKTVRELLKVR-STDTIEWQIEPNGKVMIVR 52 >UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MY6_JANSC Length = 79 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 S++T +GQTT+P VR+AL LKPG D +HY +LP G V M ++ ++ FL Sbjct: 3 HSRITSKGQTTVPKEVRQALGLKPG-DLVHYIVLPSGDVRMIAKRPAKD---LSGFLH 56 >UniRef50_A7IQ61 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=A7IQ61_XANP2 Length = 177 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Query: 38 GQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPF---NIQQGKK 94 G S+ + P G+ + D + A+L FL+ D+ +P+ RPF +I + + Sbjct: 101 GPGSLLVTLDPNGEE--ETRDGVERDPVVAAYLSFLERDMGEHPEGLRPFTEADITRLQA 158 Query: 95 LVAGMDVNIDDEIGDD 110 L ++V+ DD I DD Sbjct: 159 LTGNVEVSDDDVIPDD 174 >UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S601_SALRD Length = 98 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 S +T RGQTTIP P+REAL L+PG D + + IL G +V + R G + Sbjct: 3 TSTLTTRGQTTIPKPIREALGLQPG-DRVEF-ILHGDRVLLRRAGAD 47 >UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=Betaproteobacteria RepID=C7RTQ9_9PROT Length = 72 Score = 51.2 bits (121), Expect = 9e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + TE+ +T +GQTTIP +R++L++K G D + + ++P G V M D Sbjct: 1 MATEATLTSKGQTTIPKEIRDSLRMKAG-DRMTFTLMPDGTVVMRVKSKRFND 52 >UniRef50_B9JRI7 Regulators of stationary/sporulation gene expression protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JRI7_AGRVS Length = 102 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 +S +T +GQTTIPA +R+ L LKPG D + Y + G+ + L L Sbjct: 5 DSTITSKGQTTIPAEIRDMLGLKPG-DKVRYVTQGNRVYLRVKNGNAMQ-------LAGL 56 Query: 74 DADIQNNPQKTRPFNIQQGKKLVAG 98 D P + G+ L Sbjct: 57 LHDPSRPPMSLEEMDAAIGESLAED 81 >UniRef50_B2GF59 Putative uncharacterized protein n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GF59_LACF3 Length = 86 Score = 50.0 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 A+ + SK+T + Q T+P VR+AL LK D + + G + + + + Sbjct: 3 AMASVISKITAKNQVTVPKQVRQALGLKE-HDQLRWIAKDDGSIEVKKANNND 54 >UniRef50_A2SP91 Transcriptional regulator, AbrB family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SP91_METPP Length = 78 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT 65 + ++++GQ TIP +RE L L+ G D I + IL G V + D Sbjct: 7 PTTMSVKGQVTIPRDIRERLGLQAG-DKIAWTILSNGTVVVRPKTRRLSDLV 57 >UniRef50_A9A0K1 Transcriptional regulator, AbrB family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0K1_DESOH Length = 82 Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + +T +GQ TIP VR+AL L G D + + + G+V + +D Sbjct: 4 ATLTGKGQITIPVSVRQALGLHAG-DKLEFVLNENGEVICKPVVKRVDD 51 >UniRef50_C9AZZ6 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9AZZ6_ENTCA Length = 91 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +K+T + Q TIP VR+ L LK I +E P G++ ++ E+ + AF Sbjct: 5 AQVSAKMTSKNQITIPKSVRQILGLKENHWVI-FEFTPEGEI---KVRGEKAAPSFEAF 59 >UniRef50_Q1NTN6 Transcriptional regulator AbrB n=3 Tax=Bacteria RepID=Q1NTN6_9DELT Length = 79 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 + VT +GQ TIP +R+ LKLK G + + + P G V + E Sbjct: 2 ATTTVTSKGQVTIPKEIRDYLKLKKG-GRLEFLVDPEGVVRIAPATAE 48 >UniRef50_A1HMB3 Transcriptional regulator, AbrB family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMB3_9FIRM Length = 90 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + VT +GQ TIP PVR+ L + P + + + G V + R Sbjct: 10 ATVTEKGQVTIPKPVRDYLGV-PNGGKVRFRVRYDGVVVVERPTT 53 >UniRef50_UPI0001903C04 AbrB family transcriptional regulator n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001903C04 Length = 86 Score = 47.3 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 +T +GQTTIPA VRE L LK G D I Y I G++ M D F Sbjct: 7 TMTSKGQTTIPAEVRELLNLKSG-DRIRY-INRDGEIIMKAKNKRAIDLA-GKF-----H 58 Query: 76 DIQNNPQKTRPFNIQQGKKLVAGMD 100 D + + + G+ + A ++ Sbjct: 59 DPKRRAITLKEMDEAIGEAIAAHVN 83 >UniRef50_A4JA89 Transcriptional regulator, AbrB family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JA89_BURVG Length = 71 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 ES++ RGQTT+PA VR AL + PG + + + G VF+ Sbjct: 1 MESRINARGQTTVPAKVRMALGVGPGT-QLTWVLTLDGDVFVR 42 >UniRef50_D1C4M8 Transcriptional regulator, AbrB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4M8_SPHTD Length = 97 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG-----DEQEDH 64 + + V+ +GQ TIPA VR L + PG + + I G V M R +E Sbjct: 1 MTEIIATVSSKGQITIPAAVRRPLGVAPG-GKVVFAISDEGIVTMRRAAYPSMRASEEQP 59 >UniRef50_B8GQR7 AbrB family transcriptional regulator n=2 Tax=Bacteria RepID=B8GQR7_THISH Length = 82 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 ++T +GQ TIP VRE+L L PG I +++ GQ+ + ++ Sbjct: 4 RLTSKGQVTIPKKVRESLGLGPGS-QIDFDVDEQGQIIIRKVQ 45 >UniRef50_B4WB31 SpoVT / AbrB like domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB31_9CAUL Length = 90 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 + S++T + QTTIP PVR ALKL+ G D + YEI G +V + + D Sbjct: 17 EAMMITSRLTSKAQTTIPQPVRAALKLQDG-DELIYEIE-GERVLLKKARKTAADDPFAT 74 Query: 69 F 69 F Sbjct: 75 F 75 >UniRef50_B4SH74 Transcriptional regulator, AbrB family n=3 Tax=Chlorobium/Pelodictyon group RepID=B4SH74_PELPB Length = 82 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + +T +GQ TIP VRE L G D + + GG + + + ++ Sbjct: 4 ATLTSKGQVTIPKEVREIFGLHSG-DKLDFSCDHGGHIVVTPIKKNVDE 51 >UniRef50_A8IKJ3 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IKJ3_AZOC5 Length = 72 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE--QEDH 64 S++T + QTTIP PVR AL+LK G D I Y I G V + + +D Sbjct: 2 ITSRLTTKAQTTIPQPVRNALQLKEG-DEIAYAIE-GDHVVIRKAKPTLPTDDP 53 >UniRef50_C1F8G8 Transcriptional regulator, AbrB family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8G8_ACIC5 Length = 83 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT---MN 67 + S V+ +GQ TIP +R L LK G D + + + V + ++E+ + Sbjct: 1 MALTSTVSSKGQVTIPREIRTRLGLKEG-DRVEFVVEDDKTVL--KPAQDEENPFRAWVG 57 Query: 68 AFLRFLDAD 76 AF F + + Sbjct: 58 AFPAFKNRE 66 >UniRef50_A4BR24 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BR24_9GAMM Length = 76 Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 S +T + Q TIP VR L LKPG D + + + GQV + R + E Sbjct: 3 TSTLTSKCQVTIPVHVRRMLGLKPG-DQVAFVVE-DGQVRVVRGENRIE 49 >UniRef50_A9D138 Transcriptional regulator, AbrB family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D138_9RHIZ Length = 88 Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ESK+T +GQTTIP VRE LK+ G D I YE + G V + + Sbjct: 3 VESKITAKGQTTIPMEVREYLKVGVG-DRIGYEFVDGKVVLVPKNRS 48 >UniRef50_A6FMC9 Transcriptional regulator, AbrB family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMC9_9RHOB Length = 83 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 ES VT++GQTT+P VR AL L G D + Y IL G+V + + +E Sbjct: 3 ESTVTVKGQTTLPKDVRVALGLTSG-DKVRYLIL-DGEVRILKARSVKE 49 >UniRef50_B1YFZ1 Transcriptional regulator, AbrB family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFZ1_EXIS2 Length = 72 Score = 45.0 bits (105), Expect = 6e-04, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 SK+T +GQ TIP +R+AL+++ G D + + I G V M + +Q Sbjct: 4 SKLTSKGQITIPKKIRQALQVEEG-DRVAF-IEEDGFVIMAKADLQQ 48 >UniRef50_B2JT84 Transcriptional regulator, AbrB family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JT84_BURP8 Length = 72 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 S + G+TT+PA VR A+ +KPG +H+ ++P G V + Sbjct: 3 TSTIDAYGRTTLPAAVRSAVGVKPGT-KLHWHLMPDGSVLVR 43 >UniRef50_A5VG03 Transcriptional regulator, AbrB family n=2 Tax=Proteobacteria RepID=A5VG03_SPHWW Length = 74 Score = 44.6 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 SK+T + Q TIPA VR+ L +K G D + +E+ G+V + + Sbjct: 4 SKLTAKNQVTIPADVRQQLGVKSG-DHVAFEVE-DGKVIVRKARA 46 >UniRef50_D2M9W9 Transcriptional regulator, AbrB family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M9W9_RHOPA Length = 84 Score = 44.6 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + VT++GQ T+P VR+A +KPG D + G +++ + E +L+ L Sbjct: 3 TTVTVKGQVTLPKKVRDAAGIKPG-DKVEIRNTASGGIYIGKKESE------GEYLKKLQ 55 Query: 75 ADIQNNPQKTRPFNIQQ 91 A + +P + +I + Sbjct: 56 AIAKRHPIRGSTDDIMR 72 >UniRef50_A7HQV0 Transcriptional regulator, AbrB family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HQV0_PARL1 Length = 80 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 +K+T +GQ T+PA +R AL L+ G D + + G+ ++ D D LR + Sbjct: 5 AKLTSKGQITLPAEMRRALNLQEG-DKVVFAQGEDGRFYLEAKTDSLGD------LRGVV 57 Query: 75 ADIQNNPQKTRP-FNIQQGKK 94 ++ P + +G++ Sbjct: 58 KGVKAKPGEIESWIEEARGRR 78 >UniRef50_A1VWC3 Transcriptional regulator, AbrB family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWC3_POLNA Length = 74 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 ++S + +GQ TIPA +R AL L D + ++P G V + Sbjct: 2 SQSTLNSKGQITIPADIRRALGL-VDHDRLTLTLMPNGTVLLRAKN 46 >UniRef50_B1I0L1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0L1_LYSSC Length = 195 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILP-GGQVFMCRLG 58 T + +T +GQ T+P +RE LK+ G D+I + P V + + G Sbjct: 2 TTATLTSKGQLTVPKEIREFLKIDTG-DTIEFVTDPKTNSVTISKKG 47 >UniRef50_B3EQR0 Transcriptional regulator, AbrB family n=2 Tax=Chlorobium RepID=B3EQR0_CHLPB Length = 89 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 + +T +GQ TIP VR+AL L+ G D + + GG + R + D Sbjct: 4 ATMTNKGQVTIPKKVRDALHLQSG-DKLEFVCEEGG-IITVRPVKKSVDEVFGK 55 >UniRef50_B1XZE7 Transcriptional regulator, AbrB family n=6 Tax=Burkholderiales RepID=B1XZE7_LEPCP Length = 75 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 +E+ +T +GQ TIPA +R+A+ + QD I + L G + M Sbjct: 2 SEATLTSKGQITIPADIRKAMGVTA-QDRIVFTRLDDGTIVMR 43 >UniRef50_B8GLG7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLG7_THISH Length = 79 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 S +T +GQ T+P +RE L L+ G D + + I G+V + + Sbjct: 3 STLTSKGQVTLPKALRERLHLRTG-DKVEFLIHEDGRVELLPVTA 46 >UniRef50_C8WTC8 Transcriptional regulator, AbrB family n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WTC8_ALIAD Length = 96 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 ++T+ +K++ +GQ T+PA +R AL L+ G D + +++ G+VF+ L + + Sbjct: 1 MVTSIAKISPKGQITLPAEIRRALNLREG-DRVVFQVSNDGKVFISGLPSYDPETVIG 57 >UniRef50_Q3J855 Transcriptional regulator, AbrB family n=5 Tax=Proteobacteria RepID=Q3J855_NITOC Length = 89 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + +T +GQ T+P +R+ L L+PG ++ + + P G+V + D + + F Sbjct: 3 TTLTSKGQVTVPKKIRDYLGLRPGS-AVDFSLGPHGEVILRPAEDTPPERRKDRF 56 >UniRef50_Q6MR51 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MR51_BDEBA Length = 117 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 SK + + QTTIPA VR+AL + G D++ + + G +V + + +Q D T + L Sbjct: 43 ATSKASRKNQTTIPARVRQALGIAKG-DTLLWTV-NGDEVNIRIINRKQVDWTKTSELSL 100 Query: 73 LD 74 L+ Sbjct: 101 LE 102 >UniRef50_Q1MDL1 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q1MDL1_RHIL3 Length = 92 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 VT +GQ T+ V + L ++PG D I ++LPGG++ + + ++ +F L+ Sbjct: 5 TVTAKGQVTLKKEVLQHLGVRPG-DKIDVDLLPGGKLEVIAVERRPVAGSVESFFGSLEN 63 Query: 76 DIQNNPQKTRPFNIQQGKKLVAGMDVNID 104 + + + V+ D Sbjct: 64 KENIH-ATLEEIDEAIKAGWAGEVGVDND 91 >UniRef50_B5INF0 Transcriptional regulator, AbrB family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF0_9CHRO Length = 77 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 S +T RGQT IPAP+RE L P Q + + + G + + + Sbjct: 3 STITARGQTVIPAPIRERFALSPSQ-RLEWLVEADGTIRVVPVDAS 47 >UniRef50_B3Q5K6 Hypothetical conserved protein n=2 Tax=Rhizobium etli RepID=B3Q5K6_RHIE6 Length = 73 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + VT +GQ IP PVR+ L + G + + G+V + R D Sbjct: 3 TTVTAKGQVPIPKPVRDMLGIVAGS-KVDFHRAADGRVVLVRAVD 46 >UniRef50_Q73RP8 Transcriptional regulator, AbrB family n=1 Tax=Treponema denticola RepID=Q73RP8_TREDE Length = 82 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 +K+T +GQ TIP +R L LK G D + +E G+V++ Sbjct: 4 AKLTSKGQITIPLAIRNMLGLKTG-DKVFFE-ESRGKVYITNASQ 46 >UniRef50_D2PF52 Transcriptional regulator, AbrB family n=6 Tax=Sulfolobus islandicus RepID=D2PF52_SULIS Length = 99 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 E+ VT + Q TIP VREAL +K G D + ++ G++ M + + Sbjct: 18 ETVVTRKYQVTIPKEVREALGIKMG-DKLIVKVE-DGKIIMEPVRAQD 63 >UniRef50_C7T7Z6 Transcriptional regulator, AbrB family n=6 Tax=Lactobacillus RepID=C7T7Z6_LACRG Length = 101 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 E+ VT +GQ TIPA +R +K + + ++ G V M Sbjct: 26 LEATVTSKGQVTIPAEIRRRSGIKKNT-KVRFNMMEDGTVQMR 67 >UniRef50_Q216J9 Transcriptional regulator, AbrB family n=4 Tax=Rhodopseudomonas palustris RepID=Q216J9_RHOPB Length = 85 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 + VTI+GQ T+P VR+A +KPG D + G +F+ + G E + Sbjct: 1 MSTTVTIKGQITLPKKVRDAAGIKPG-DKVEIRNTASGGIFIGKSGSEAD 49 >UniRef50_C6LC19 Toxin-antitoxin system, antitoxin component, AbrB famil n=2 Tax=Bryantella formatexigens DSM 14469 RepID=C6LC19_9FIRM Length = 88 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 +K++ GQ T+P +R L LK G D I + G++ + + Sbjct: 7 AKISANGQITVPVEIRRLLGLKSG-DKILFFQKQDGEIVVSNASSQ 51 >UniRef50_Q210F7 Transcriptional regulator, AbrB family n=2 Tax=Rhodopseudomonas palustris RepID=Q210F7_RHOPB Length = 94 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 + VT +GQ T+PA +RE L + G D + +++ G++ + + Sbjct: 4 KASATVTSKGQITLPASIRERLGVTAG-DRLDFDLSASGRLTVTAV 48 >UniRef50_C9RXL6 Transcriptional regulator, AbrB family n=2 Tax=Geobacillus RepID=C9RXL6_GEOSY Length = 97 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFM 54 SH T S ++ + Q TIP +RE L +PG D + + +V + Sbjct: 5 SHETYTYYSTLSSKHQVTIPMKIREVLGAEPG-DQVAFVYGENQEVTL 51 >UniRef50_Q3J9J2 Transcriptional regulator, AbrB family n=5 Tax=Bacteria RepID=Q3J9J2_NITOC Length = 82 Score = 41.6 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 VT +GQ TIP VRE L + P D I + I G+ ++ + Sbjct: 14 TVTAKGQVTIPRNVRETLGITPETD-IDF-IEDNGRFYIAKAD 54 >UniRef50_B2SVA5 SpoVT / AbrB like domain protein n=17 Tax=Proteobacteria RepID=B2SVA5_XANOP Length = 82 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQD-SIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 E+ V RGQ T+P VR+AL L G I L GG++ + + E F Sbjct: 1 MEATVAERGQITLPKAVRDALGLTKGTTLKIE---LDGGRIILRKDVSEALRKVRGKF 55 >UniRef50_B1I1W7 Transcriptional regulator, AbrB family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1W7_DESAP Length = 88 Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 +++T +GQ TIP VR L L+PG D + +++ P G+V + Sbjct: 2 LRARLTSKGQITIPVIVRRKLNLQPG-DELVFDLGPDGEVKVR 43 >UniRef50_B9MMB7 Transcriptional regulator, AbrB family n=7 Tax=Clostridia RepID=B9MMB7_ANATD Length = 89 Score = 40.8 bits (94), Expect = 0.012, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 ++ SK+T +GQ +PA +R+ + DS+ + + G+V + Sbjct: 1 MIQARSKITGKGQLQLPAEIRKIIG-GEIGDSVLFTVQDDGKVIIE 45 >UniRef50_A1BGZ2 Transcriptional regulator, AbrB family n=2 Tax=Chlorobium RepID=A1BGZ2_CHLPD Length = 74 Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 +T +GQTTIPA +R+A+KL+ G D + +E+ V M ++ +D Sbjct: 6 ITSKGQTTIPASIRKAVKLEEG-DRVLFEVKED-YVIMRKIKLPADD 50 >UniRef50_Q5KXG5 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KXG5_GEOKA Length = 89 Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 + SK++ RGQ IPA +R+ L L G D + + + G++ + Sbjct: 1 MKATSKLSSRGQVVIPAEIRKTLGLAEGDD-LTFIVNEDGEIKVE 44 >UniRef50_B5YIC5 SpoVT / AbrB like domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIC5_THEYD Length = 88 Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 +T +S +T + Q TIP +RE LK+ G D++++ I +V + + + E+ Sbjct: 4 ITEKSALTKKYQITIPKKIREFLKINKG-DTVNFIIE-NNEVKLKPVRSKIEE 54 >UniRef50_C7P402 Transcriptional regulator, AbrB family n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P402_HALMD Length = 81 Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 E+ V+ RG TIP+ +REAL ++ G D I + + G V + + + Sbjct: 10 ETTVSERGGVTIPSEIREALSIEAG-DKIRWTVEE-GDVMVEVVHQREG 56 >UniRef50_C0GTY3 Transcriptional regulator, AbrB family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTY3_9DELT Length = 91 Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 + ESKVT +GQ TIP +R+++ + + + L G V + Sbjct: 1 MALESKVTSKGQVTIPRDIRDSMGIG-SAGRVSFTDLGNGLVLIR 44 >UniRef50_A3JJF9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJF9_9ALTE Length = 81 Score = 39.6 bits (91), Expect = 0.027, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 ES V+ +GQ IP +R AL ++ G D + + + G + + Sbjct: 5 ESTVSEKGQLVIPREIRHALDVQRG-DKLAWVVEDDGTLRVT 45 >UniRef50_UPI0001C31534 transcriptional regulator, AbrB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31534 Length = 82 Score = 39.6 bits (91), Expect = 0.027, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVF 53 + + +++T +GQ TIP VR+AL L G D I + + V Sbjct: 1 MESSARLTSKGQVTIPKAVRDALDLHEG-DEILFRVERKRAVV 42 >UniRef50_A6DSW9 Transcriptional regulator, AbrB family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSW9_9BACT Length = 81 Score = 39.6 bits (91), Expect = 0.029, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + +T +GQ TIP +R+ L L G D I G+ + + + +D Sbjct: 4 ATITTKGQVTIPKDIRDYLHLHQG-DKIEIVANDKGEAIIRPISKKVDD 51 >UniRef50_B3QXW1 Transcriptional regulator, AbrB family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXW1_CHLT3 Length = 84 Score = 39.6 bits (91), Expect = 0.031, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + +T +GQ TIP +R++LKL+ G D I I + + + ++ Sbjct: 6 ATITSKGQVTIPKKIRDSLKLRTG-DKIEIVITDKMEAVIRPISKTVDE 53 >UniRef50_A7HWC1 Transcriptional regulator, AbrB family n=4 Tax=Rhizobiales RepID=A7HWC1_PARL1 Length = 79 Score = 39.6 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 VT +GQ TIP VR+ L +KPG + + +E G+ + G ++ Sbjct: 5 VTSKGQVTIPKAVRDRLGIKPGTE-VQFEPTEDGRFLLTTAGRKRS 49 >UniRef50_C5D932 Transcriptional regulator, AbrB family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D932_GEOSW Length = 103 Score = 39.6 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 3 ANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 A+ + + V+ S+++ RGQ IP +R+ L L G D + + + G++ + + ++ Sbjct: 7 ADHQPNVVVKATSRLSSRGQVVIPIEIRKTLGLTEGDD-LTFILNKDGEIKVEVVKKQRV 65 Query: 63 DHTMN 67 + Sbjct: 66 SELLG 70 >UniRef50_B2IWV2 Transcriptional regulator, AbrB family n=3 Tax=Cyanobacteria RepID=B2IWV2_NOSP7 Length = 82 Score = 39.6 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 + ++ +GQ TIP +R+ L L G + + I G V + L Sbjct: 3 ASATISTKGQVTIPKEIRDYLNLDTGS-KVDFVIDENGIVKLIPLN 47 >UniRef50_C8S823 Transcriptional regulator, AbrB family n=4 Tax=Euryarchaeota RepID=C8S823_FERPL Length = 75 Score = 39.2 bits (90), Expect = 0.038, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 K+T Q TIPA VR+ + LK G D + E +V + R E+ Sbjct: 4 KITRNYQITIPAEVRKKMGLKIG-DLLEVEYDKNKEVIIIRKVKEE 48 >UniRef50_D2UA83 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UA83_XANAL Length = 85 Score = 39.2 bits (90), Expect = 0.045, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 E+ V RGQ T+P VR+AL L G ++ L GG++ + + D+ F Sbjct: 1 MEAIVAERGQITLPKAVRDALGLSKG--TVLKVELDGGRIILRKSVDDAISRARGRF 55 >UniRef50_Q2RKN2 Transcriptional regulator, AbrB family n=2 Tax=Clostridia RepID=Q2RKN2_MOOTA Length = 92 Score = 38.9 bits (89), Expect = 0.050, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD----EQEDHT 65 ++T +GQ TIP VRE L LK G D + + ++ + ++ QED Sbjct: 9 RLTSKGQMTIPQSVRETLGLKAG-DYLTILVDED-EIRLRKVQPVKPLSQEDPI 60 >UniRef50_C0GFP3 Transcriptional regulator, AbrB family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFP3_9FIRM Length = 87 Score = 38.9 bits (89), Expect = 0.057, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 ++K+T +GQ T+P VRE L++ G D I ++I G +V + L Sbjct: 2 IKAKITGKGQITVPKEVREKLEVGYG-DYITFDI-SGKEVTVKPL 44 >UniRef50_A5G781 Transcriptional regulator, AbrB family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G781_GEOUR Length = 81 Score = 38.5 bits (88), Expect = 0.070, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 S VT +GQ TIP +R+ L ++ D + + +L G +V + + Sbjct: 3 STVTSKGQVTIPKEIRDLLHIR-SNDKVDF-VLDGDRVLLVPVKT 45 >UniRef50_Q0W2F1 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2F1_UNCMA Length = 78 Score = 38.5 bits (88), Expect = 0.075, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + SKV+ + Q T+P VR+ L +KPG D + + I ++ + L D Sbjct: 3 SVSSKVSSQNQITLPGDVRKKLGVKPG-DKVVF-IEEDDRIVIKSLKD 48 >UniRef50_B7R4T0 Transcriptional regulator, AbrB family protein n=1 Tax=Thermococcus sp. AM4 RepID=B7R4T0_9EURY Length = 82 Score = 38.1 bits (87), Expect = 0.092, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFM 54 VT + Q TIP VREAL +K G D + + V M Sbjct: 4 VTKKYQVTIPKEVREALGIKAG-DEVVFVREGNRYVLM 40 >UniRef50_A1B6W4 Transcriptional regulator, AbrB family n=2 Tax=Alphaproteobacteria RepID=A1B6W4_PARDP Length = 94 Score = 38.1 bits (87), Expect = 0.094, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 + +T +GQ TIP VR + L PG D + + + G + Sbjct: 18 TATITSKGQITIPQKVRLDMGLTPG-DRVDFVRMDDGHYAVVPA 60 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriac... 146 2e-34 UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=B... 123 1e-27 UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales Re... 119 3e-26 UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organis... 118 4e-26 UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B... 118 6e-26 UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella dranc... 117 1e-25 UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus Rep... 116 2e-25 UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepI... 114 1e-24 UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepI... 108 5e-23 UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 102 5e-21 UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphapro... 100 1e-20 UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=... 94 1e-18 UniRef50_B6IWT3 Putative uncharacterized protein n=1 Tax=Rhodosp... 87 1e-16 UniRef50_B9JRI7 Regulators of stationary/sporulation gene expres... 83 3e-15 UniRef50_UPI0001903C04 AbrB family transcriptional regulator n=1... 82 5e-15 UniRef50_A7HQV0 Transcriptional regulator, AbrB family n=1 Tax=P... 71 1e-11 UniRef50_D2M9W9 Transcriptional regulator, AbrB family n=1 Tax=R... 70 2e-11 UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=B... 70 2e-11 UniRef50_A9A0K1 Transcriptional regulator, AbrB family n=1 Tax=D... 70 3e-11 UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=J... 69 3e-11 UniRef50_C9AZZ6 Predicted protein n=3 Tax=Enterococcus casselifl... 69 6e-11 UniRef50_B4SH74 Transcriptional regulator, AbrB family n=3 Tax=C... 68 1e-10 UniRef50_A7IQ61 Putative uncharacterized protein n=2 Tax=Rhizobi... 67 2e-10 UniRef50_A9D138 Transcriptional regulator, AbrB family protein n... 66 3e-10 UniRef50_B2GF59 Putative uncharacterized protein n=1 Tax=Lactoba... 66 3e-10 UniRef50_Q3J855 Transcriptional regulator, AbrB family n=5 Tax=P... 65 7e-10 UniRef50_C1F8G8 Transcriptional regulator, AbrB family n=1 Tax=A... 65 9e-10 UniRef50_A1HMB3 Transcriptional regulator, AbrB family n=1 Tax=T... 64 1e-09 UniRef50_B3EQR0 Transcriptional regulator, AbrB family n=2 Tax=C... 64 2e-09 UniRef50_Q1NTN6 Transcriptional regulator AbrB n=3 Tax=Bacteria ... 63 2e-09 UniRef50_A6FMC9 Transcriptional regulator, AbrB family protein n... 62 4e-09 UniRef50_A2SP91 Transcriptional regulator, AbrB family n=1 Tax=M... 62 5e-09 UniRef50_A1VWC3 Transcriptional regulator, AbrB family n=1 Tax=P... 62 5e-09 UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactoba... 62 8e-09 UniRef50_D1C4M8 Transcriptional regulator, AbrB family n=1 Tax=S... 61 1e-08 UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n... 61 1e-08 UniRef50_C8WTC8 Transcriptional regulator, AbrB family n=3 Tax=A... 60 2e-08 UniRef50_B8GQR7 AbrB family transcriptional regulator n=2 Tax=Ba... 60 3e-08 UniRef50_B4WB31 SpoVT / AbrB like domain protein n=1 Tax=Brevund... 59 3e-08 UniRef50_A4JA89 Transcriptional regulator, AbrB family n=1 Tax=B... 58 7e-08 UniRef50_B1I0L1 Putative uncharacterized protein n=1 Tax=Lysinib... 58 8e-08 UniRef50_B1YFZ1 Transcriptional regulator, AbrB family n=1 Tax=E... 58 8e-08 UniRef50_A8IKJ3 Putative transcriptional regulator n=1 Tax=Azorh... 58 8e-08 UniRef50_A4BR24 Putative uncharacterized protein n=1 Tax=Nitroco... 58 1e-07 UniRef50_B2JT84 Transcriptional regulator, AbrB family n=1 Tax=B... 57 1e-07 UniRef50_A5VG03 Transcriptional regulator, AbrB family n=2 Tax=P... 57 2e-07 UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmone... 57 3e-07 UniRef50_B8GLG7 Putative uncharacterized protein n=1 Tax=Thioalk... 56 3e-07 UniRef50_B1XZE7 Transcriptional regulator, AbrB family n=6 Tax=B... 56 4e-07 Sequences not found previously or not previously below threshold: UniRef50_Q216J9 Transcriptional regulator, AbrB family n=4 Tax=R... 64 2e-09 UniRef50_A6DSW9 Transcriptional regulator, AbrB family protein n... 59 3e-08 UniRef50_Q1MDL1 Putative uncharacterized protein n=3 Tax=Proteob... 59 4e-08 UniRef50_B2IWV2 Transcriptional regulator, AbrB family n=3 Tax=C... 58 7e-08 UniRef50_B3QXW1 Transcriptional regulator, AbrB family n=1 Tax=C... 57 1e-07 UniRef50_C7T7Z6 Transcriptional regulator, AbrB family n=6 Tax=L... 57 2e-07 UniRef50_Q210F7 Transcriptional regulator, AbrB family n=2 Tax=R... 55 9e-07 UniRef50_C9RXL6 Transcriptional regulator, AbrB family n=2 Tax=G... 53 2e-06 UniRef50_Q0B3P9 Transcriptional regulator, AbrB family n=12 Tax=... 53 2e-06 UniRef50_B1I1W7 Transcriptional regulator, AbrB family n=1 Tax=C... 53 3e-06 UniRef50_A5KRY2 Putative uncharacterized protein n=1 Tax=candida... 53 3e-06 UniRef50_C7NG53 Looped-hinge helix DNA binding domain, AbrB fami... 53 3e-06 UniRef50_Q3J9J2 Transcriptional regulator, AbrB family n=5 Tax=B... 52 5e-06 UniRef50_D2PF52 Transcriptional regulator, AbrB family n=6 Tax=S... 52 5e-06 UniRef50_A1B6W4 Transcriptional regulator, AbrB family n=2 Tax=A... 52 6e-06 UniRef50_Q73RP8 Transcriptional regulator, AbrB family n=1 Tax=T... 52 7e-06 UniRef50_Q5KXG5 Hypothetical conserved protein n=1 Tax=Geobacill... 52 7e-06 UniRef50_UPI0001C31534 transcriptional regulator, AbrB family n=... 51 1e-05 UniRef50_B3Q5K6 Hypothetical conserved protein n=2 Tax=Rhizobium... 51 1e-05 UniRef50_C6LC19 Toxin-antitoxin system, antitoxin component, Abr... 51 1e-05 UniRef50_A1BGZ2 Transcriptional regulator, AbrB family n=2 Tax=C... 51 1e-05 UniRef50_A7HWC1 Transcriptional regulator, AbrB family n=4 Tax=R... 51 1e-05 UniRef50_C0GTY3 Transcriptional regulator, AbrB family n=1 Tax=D... 51 1e-05 UniRef50_Q1Q0K6 Putative uncharacterized protein n=1 Tax=Candida... 50 2e-05 UniRef50_C5D932 Transcriptional regulator, AbrB family n=1 Tax=G... 50 2e-05 UniRef50_UPI0001C392F3 AbrB family transcriptional regulator n=1... 50 2e-05 UniRef50_C8WSV3 Transcriptional regulator, AbrB family n=3 Tax=A... 50 3e-05 UniRef50_Q6MR51 Putative uncharacterized protein n=1 Tax=Bdellov... 50 3e-05 UniRef50_Q2ESN6 Putative uncharacterized protein n=5 Tax=Bacillu... 49 4e-05 UniRef50_A5G781 Transcriptional regulator, AbrB family n=1 Tax=G... 49 4e-05 UniRef50_D1YWH1 Putative AbrB family transcriptional regulator n... 49 4e-05 UniRef50_Q2RKN2 Transcriptional regulator, AbrB family n=2 Tax=C... 49 5e-05 UniRef50_B7R4T0 Transcriptional regulator, AbrB family protein n... 49 5e-05 UniRef50_B5YIC5 SpoVT / AbrB like domain protein n=1 Tax=Thermod... 48 6e-05 UniRef50_B9MMB7 Transcriptional regulator, AbrB family n=7 Tax=C... 48 7e-05 UniRef50_C2KQP5 Regulator of stationary/sporulation gene express... 48 8e-05 UniRef50_C6PD28 Transcriptional regulator, AbrB family n=1 Tax=T... 48 9e-05 UniRef50_C8S731 Transcriptional regulator, AbrB family n=1 Tax=F... 48 1e-04 UniRef50_B5IRE8 Transcriptional regulator, AbrB family protein n... 48 1e-04 UniRef50_A4YFZ2 Transcriptional regulator, AbrB family n=2 Tax=S... 47 1e-04 UniRef50_B5VXE3 SpoVT/AbrB domain protein n=1 Tax=Arthrospira ma... 47 2e-04 UniRef50_Q0W2F1 Putative uncharacterized protein n=1 Tax=uncultu... 47 2e-04 UniRef50_B9ZBJ2 Transcriptional regulator, AbrB family n=1 Tax=N... 47 2e-04 UniRef50_Q3QZK3 Transcriptional regulator AbrB n=1 Tax=Xylella f... 47 2e-04 UniRef50_C8S7I2 Transcriptional regulator, AbrB family n=1 Tax=F... 47 2e-04 UniRef50_B5INF0 Transcriptional regulator, AbrB family protein n... 47 2e-04 UniRef50_Q0AVI2 Regulators of stationary/sporulation gene expres... 46 3e-04 UniRef50_A3JJF9 Putative uncharacterized protein n=1 Tax=Marinob... 46 3e-04 UniRef50_B2SVA5 SpoVT / AbrB like domain protein n=17 Tax=Proteo... 46 3e-04 UniRef50_O28268 Putative uncharacterized protein n=1 Tax=Archaeo... 46 3e-04 UniRef50_C6AVT7 Transcriptional regulator, AbrB family n=5 Tax=R... 46 4e-04 UniRef50_B9LVR8 Transcriptional regulator, AbrB family n=1 Tax=H... 46 4e-04 UniRef50_UPI0001C31CD2 transcriptional regulator, AbrB family n=... 46 4e-04 UniRef50_A1HRH9 Transcriptional regulator, AbrB family n=1 Tax=T... 46 5e-04 UniRef50_B7K1R8 Transcriptional regulator, AbrB family n=2 Tax=C... 46 5e-04 UniRef50_B0T0S0 SpoVT/AbrB domain protein n=1 Tax=Caulobacter sp... 45 5e-04 UniRef50_A8UX28 Putative uncharacterized protein n=1 Tax=Hydroge... 45 5e-04 UniRef50_C7BP91 Putative uncharacterized protein n=1 Tax=Photorh... 45 5e-04 UniRef50_B8FB51 Transcriptional regulator, AbrB family n=1 Tax=D... 45 6e-04 UniRef50_C0GUG3 Transcriptional regulator, AbrB family n=1 Tax=D... 45 7e-04 UniRef50_B6IUP8 Transcriptional regulator, SpoVT n=1 Tax=Rhodosp... 45 7e-04 UniRef50_C7RWC7 Transcriptional regulator, AbrB family n=7 Tax=r... 45 7e-04 UniRef50_D1BAR1 Looped-hinge helix DNA binding domain, AbrB fami... 45 8e-04 UniRef50_C7P402 Transcriptional regulator, AbrB family n=1 Tax=H... 45 8e-04 UniRef50_A7NN01 Transcriptional regulator, AbrB family n=8 Tax=B... 45 8e-04 UniRef50_Q1NK49 Transcriptional regulator AbrB n=2 Tax=delta pro... 45 9e-04 UniRef50_C0GFP3 Transcriptional regulator, AbrB family n=1 Tax=D... 45 0.001 UniRef50_A5D5A4 Regulators of stationary/sporulation gene expres... 45 0.001 UniRef50_Q1RJ89 Putative uncharacterized protein n=2 Tax=Rickett... 45 0.001 UniRef50_B7A5B5 Transcriptional regulator, AbrB family n=1 Tax=T... 44 0.001 UniRef50_D2UA83 Putative uncharacterized protein n=1 Tax=Xanthom... 44 0.001 UniRef50_C9RD59 Transcriptional regulator, AbrB family n=3 Tax=C... 44 0.001 UniRef50_C4VR09 SpoVT / AbrB like domain protein n=10 Tax=Lactob... 44 0.002 UniRef50_C3I9N4 Putative uncharacterized protein n=1 Tax=Bacillu... 44 0.002 UniRef50_C1XLQ9 Looped-hinge helix DNA binding domain, AbrB fami... 43 0.002 UniRef50_C8S823 Transcriptional regulator, AbrB family n=4 Tax=E... 43 0.002 UniRef50_Q4J7F7 Conserved protein n=4 Tax=Sulfolobus RepID=Q4J7F... 43 0.002 UniRef50_C1XFP0 Looped-hinge helix DNA binding domain, AbrB fami... 43 0.002 UniRef50_C9RDG3 Transcriptional regulator, AbrB family n=1 Tax=A... 43 0.002 UniRef50_D1AJU6 Transcriptional regulator, AbrB family n=1 Tax=S... 43 0.003 UniRef50_C2BDW9 Conjugative transposon regulatory protein n=4 Ta... 43 0.003 UniRef50_C7NV75 Transcriptional regulator, AbrB family n=1 Tax=H... 43 0.003 UniRef50_C5A3P5 Transcription regulator, SpoVT/AbrB family n=5 T... 43 0.003 UniRef50_B5ZP77 Transcriptional regulator, AbrB family n=3 Tax=R... 43 0.003 UniRef50_B9Y5N5 Putative uncharacterized protein n=1 Tax=Holdema... 43 0.004 UniRef50_UPI0001C41E2A transcriptional regulator AbrB family n=1... 43 0.004 UniRef50_Q5V1Y9 Transcription regulator n=1 Tax=Haloarcula maris... 43 0.004 UniRef50_B5YB48 Transcriptional regulator, AbrB family n=2 Tax=D... 43 0.004 UniRef50_Q82V77 Putative uncharacterized protein n=1 Tax=Nitroso... 43 0.004 UniRef50_A5CYF9 Putative uncharacterized protein n=1 Tax=Pelotom... 42 0.004 UniRef50_Q5JE05 Transcription regulator, SpoVT/AbrB family n=1 T... 42 0.004 UniRef50_Q0G647 Putative uncharacterized protein n=1 Tax=Fulvima... 42 0.004 UniRef50_B1XNX3 Transcriptional regulator, AbrB family n=1 Tax=S... 42 0.005 UniRef50_C8W0Q0 Transcriptional regulator, AbrB family n=1 Tax=D... 42 0.005 UniRef50_C5BY83 Transcriptional regulator, AbrB family n=1 Tax=B... 42 0.006 UniRef50_B1I6W2 Transcriptional regulator, AbrB family n=2 Tax=C... 42 0.007 UniRef50_Q1NUD9 Transcriptional regulator AbrB n=3 Tax=Proteobac... 42 0.007 UniRef50_C8W1I9 Transcriptional regulator, AbrB family n=1 Tax=D... 42 0.007 UniRef50_Q9HHH9 Vng6387h n=2 Tax=Halobacterium salinarum RepID=Q... 42 0.007 UniRef50_A8UWZ5 Putative uncharacterized protein n=1 Tax=Hydroge... 42 0.007 UniRef50_Q3J930 Transcriptional regulator, AbrB family n=2 Tax=N... 42 0.008 UniRef50_C0A5P2 Transcriptional regulator, AbrB family n=1 Tax=O... 42 0.009 UniRef50_A3DFW4 Transcriptional regulator, AbrB family n=12 Tax=... 42 0.009 UniRef50_Q18EN4 Transcriptional regulator n=4 Tax=Halobacteriace... 41 0.010 UniRef50_D1CA28 Transcriptional regulator, AbrB family n=1 Tax=S... 41 0.010 UniRef50_Q18EN7 Transcription regulator n=1 Tax=Haloquadratum wa... 41 0.010 UniRef50_Q0G202 Putative uncharacterized protein n=1 Tax=Fulvima... 41 0.012 UniRef50_A2BMA4 Acetolactate synthase, small (Regulatory) subuni... 41 0.014 UniRef50_A4WHX8 Transcriptional regulator, AbrB family n=1 Tax=P... 41 0.015 UniRef50_C5A2F5 Transcription regulator, SpoVT/AbrB family n=4 T... 40 0.021 UniRef50_Q5V7R4 Transcriptional regulator n=1 Tax=Haloarcula mar... 40 0.021 UniRef50_C5A3X5 Transcription regulator, SpoVT/AbrB family n=3 T... 40 0.022 UniRef50_B7R295 Transcription regulator, SpoVT/AbrB family n=2 T... 40 0.027 UniRef50_B9MR03 Transcriptional regulator, AbrB family n=7 Tax=F... 40 0.028 UniRef50_C0GWI2 Transcriptional regulator, AbrB family n=1 Tax=D... 40 0.028 UniRef50_C5A4A3 Transcription regulator, SpoVT/AbrB family n=1 T... 40 0.032 UniRef50_A2BJE0 Putative uncharacterized protein n=1 Tax=Hyperth... 40 0.033 UniRef50_A8UXK3 Transcriptional regulator, AbrB family protein n... 40 0.034 UniRef50_A1RYS9 Transcriptional regulator, AbrB family n=1 Tax=T... 40 0.034 UniRef50_Q745X1 Putative uncharacterized protein n=1 Tax=Thermus... 39 0.043 UniRef50_Q5JHP9 Transcription regulator, SpoVT/AbrB family n=2 T... 39 0.046 UniRef50_A7IIG0 SpoVT/AbrB domain protein n=5 Tax=Bacteria RepID... 38 0.059 UniRef50_B8GLG0 Transcriptional regulator, AbrB family n=1 Tax=T... 38 0.060 UniRef50_D2PVW4 Transcriptional regulator, AbrB family n=1 Tax=K... 38 0.061 UniRef50_C7RQB4 Transcriptional regulator, AbrB family n=1 Tax=C... 38 0.064 UniRef50_UPI00019018D3 hypothetical protein MtubCP_16121 n=1 Tax... 38 0.067 UniRef50_B1I1Z2 Transcriptional regulator, AbrB family n=1 Tax=C... 38 0.069 UniRef50_Q1NKK4 Transcriptional regulator AbrB n=1 Tax=delta pro... 38 0.069 UniRef50_C2HAZ6 Addiction module antidote n=12 Tax=Enterococcus ... 38 0.075 UniRef50_UPI00001B566A hypothetical protein PHS014.3n n=1 Tax=Py... 38 0.081 UniRef50_A2BJP3 Predicted transcriptional regulator n=1 Tax=Hype... 38 0.085 UniRef50_P37554 Stage V sporulation protein T n=62 Tax=Bacteria ... 38 0.089 UniRef50_D2PHG8 Transcriptional regulator, AbrB family n=4 Tax=S... 38 0.099 >UniRef50_P15373 HtrA suppressor protein n=48 Tax=Enterobacteriaceae RepID=SOHA_ECOLI Length = 111 Score = 146 bits (368), Expect = 2e-34, Method: Composition-based stats. Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE Sbjct: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 Query: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE Sbjct: 61 QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE 111 >UniRef50_Q88NE4 HtrA suppressor protein sohA, putative n=2 Tax=Bacteria RepID=Q88NE4_PSEPK Length = 129 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 4/107 (3%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 A ES +T R QTT+P VR AL LK +D IHY I P G V + R ++D + Sbjct: 23 AATFDVESTLTDRYQTTVPETVRRALGLKK-RDKIHYSIRPDGGVILTRAEATEDDPVLG 81 Query: 68 AFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL FL DI NPQ+ + + I + KLV +V++D + D+ Sbjct: 82 KFLDFLAHDIATNPQRLQVVDAGLIARLDKLVGDAEVDLDQPLSADD 128 >UniRef50_B7KM74 HtaR suppressor protein n=2 Tax=Chroococcales RepID=B7KM74_CYAP7 Length = 110 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 +ES +T R QTTIP +R+ L LK D I Y IL GQV + R + D + FL F Sbjct: 9 SESTLTKRYQTTIPESIRKVLGLKK-HDKICYTILEDGQVTISRAAQTENDPILENFLVF 67 Query: 73 LDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 L +++ NPQ + + + K LVA +D+++D + D++ Sbjct: 68 LAQELKKNPQHLQGISANLVSHLKSLVADVDLDLDAPLSDED 109 >UniRef50_B4RY94 HtaR suppressor protein n=8 Tax=cellular organisms RepID=B4RY94_ALTMD Length = 109 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 4/108 (3%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTM 66 +H L TES +T R QTT+P+ VR+AL+L +D I Y I G V + R+ ++ D + Sbjct: 2 AHVALETESTLTDRFQTTVPSSVRQALRLGK-KDKIKYAIQSDGSVVISRVASQESDPVI 60 Query: 67 NAFLRFLDADIQNNPQKTRPFNIQQGKK---LVAGMDVNIDDEIGDDE 111 FL F+ D+Q +P+K P + + LV G+++++D + D++ Sbjct: 61 GEFLSFIARDMQTHPEKLEPLSASMRESVNTLVHGVEIDLDAPLLDED 108 >UniRef50_B7J9L1 HtrA suppressor protein n=4 Tax=Bacteria RepID=B7J9L1_ACIF2 Length = 109 Score = 118 bits (295), Expect = 6e-26, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 5/108 (4%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG-DEQEDHTM 66 A L ES +T R QTT+P VR AL+L +D IHY I PGG+V + R E++D + Sbjct: 2 AATLEVESTLTDRYQTTVPETVRRALRLGK-RDKIHYTIRPGGEVVLTRAEDSEEDDPVL 60 Query: 67 NAFLRFLDADIQNNPQKTRPFNIQ---QGKKLVAGMDVNIDDEIGDDE 111 FL FL DI +P++ + ++ + + L G++V++D + D+ Sbjct: 61 GQFLGFLARDIATHPERLQAIDVSFVQRLQSLTGGIEVDLDAPLSADD 108 >UniRef50_C6MXM3 Putative regulator PrlF n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MXM3_9GAMM Length = 124 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 +L TES +T R QTTIP VR+AL L +D I Y + P G VF+ ++ + Q+D ++ Sbjct: 2 ANLLQTESTLTDRYQTTIPDAVRKALHLNK-RDKILYTVQPDGHVFLSKIEENQDDPIID 60 Query: 68 AFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL F+ DI+NNPQ N + + LV G++ ++++ + DDE Sbjct: 61 NFLEFIAEDIRNNPQHLTSINQTLFNRIESLVNGVEFDLNEMLLDDE 107 >UniRef50_Q7N0E7 Suppressor protein SohA n=2 Tax=Photorhabdus RepID=Q7N0E7_PHOLL Length = 116 Score = 116 bits (290), Expect = 2e-25, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 4/103 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE-DHTMNAFLR 71 ESK+T R QTTIP VR+ALKLKPG DSI Y+IL G V + R E+E D M +FL Sbjct: 13 AESKLTSRSQTTIPTSVRKALKLKPGHDSIAYKILSSGDVLISRKNSEEEKDLVMESFLD 72 Query: 72 FLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 FL DI+ +P + + + I Q K L+AG+D+++ + + D+ Sbjct: 73 FLAKDIRRHPGQVQQLDEQLINQAKSLIAGIDIDLSNPLSADD 115 >UniRef50_A8LU31 Transcriptional regulator n=10 Tax=Bacteria RepID=A8LU31_DINSH Length = 108 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 A+ SK+T R QTT+PA VR+ LKL G D I Y P G+V++ + ++ED + A Sbjct: 3 ALAQDVSKLTDRYQTTVPAGVRKQLKLGKG-DQIRYCTEPSGRVYIEPVRSDEEDPVLGA 61 Query: 69 FLRFLDADIQNNPQKTRPFNIQ---QGKKLVAGMDVNIDDEIGDDE 111 FL F++ADI+ +P + R F+ + LV +DV++D + ++ Sbjct: 62 FLDFVEADIKAHPDRIRAFDGALHDRLAALVGDVDVDLDAPLSLED 107 >UniRef50_B6JK06 HtrA suppressor protein n=5 Tax=Rhizobiales RepID=B6JK06_OLICO Length = 113 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%) Query: 5 ARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE--QE 62 A++ +L + +T RGQTT+PA +R+ L L +D + + L G V + + + Sbjct: 2 AKAAEILEIPATITDRGQTTVPAAIRKMLALGK-RDQVVFRGLADGTVMISKKETRAPEG 60 Query: 63 DHTMNAFLRFLDADIQNNPQKTRPFN---IQQGKKLVAGMDVNIDDEIGDDE 111 D + FL FL D+ N P + RP + +GK LV G+ V++ + DD+ Sbjct: 61 DPVIGKFLDFLARDMTNEPGRIRPVPKSLVARGKGLVKGIRVDLGAALPDDD 112 >UniRef50_B4RLP8 YdcA n=9 Tax=Neisseria RepID=B4RLP8_NEIG2 Length = 103 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE----DHT 65 + S +T + QTTIP VR+AL L+ QD I + +L GGQV + + E+E D Sbjct: 4 IFDAVSTMTSKNQTTIPESVRKALGLEK-QDKIRFSVLGGGQVLLEKNNTEEEEFEHDPV 62 Query: 66 MNAFLRFLDADIQNNPQKTRPFNIQQGKKL 95 + FL FL+ + NP +P + + +L Sbjct: 63 VGKFLHFLENSMTKNPNSIKPTSQSRFNRL 92 >UniRef50_C7JID8 Transcriptional regulator AbrB n=11 Tax=Alphaproteobacteria RepID=C7JID8_ACEP3 Length = 110 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 +L ES +T +GQTTIP VR+AL + G I + + +V + + +E D + F Sbjct: 4 LLKAESTITAKGQTTIPKSVRKALGVDYG-GRIAFVVDDQRRVHVEKATEETSDPVVERF 62 Query: 70 LRFLDADIQNNPQKTRPFNI-----QQGKKLVAGMDVNIDDEIGDD 110 L FL+ D+ ++ ++R N+ + LV MDV++DDEI D Sbjct: 63 LEFLEKDMLDH-SRSRLVNLPASLPDRVAALVGNMDVDLDDEIEGD 107 >UniRef50_Q13VW0 Transcriptional regulator, AbrB family n=18 Tax=Proteobacteria RepID=Q13VW0_BURXL Length = 128 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 10/111 (9%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPA H V + +T +GQ T+P P+R+AL + G + +++ G +V + R+ E Sbjct: 24 MPA---IHEV----ATLTSKGQITLPKPIRQALGVDAG-GKLAFDLR-GSEVVVTRVDAE 74 Query: 61 QEDHTMNAFLRFLDADIQNNPQ-KTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 ED + AFL L DI+ + P ++ + AG VN+ +EI + Sbjct: 75 HEDPAIGAFLSLLARDIEAGRNVQGLPEDLARAMLEHAGHSVNLGEEIDGE 125 >UniRef50_B6IWT3 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IWT3_RHOCS Length = 108 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Query: 8 HAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 A + VT +GQTT+P +R+ L + P I ++ + + +E D + Sbjct: 4 AARIEKICTVTSKGQTTLPLAIRQLLGV-PDGGRIRVRTEE-RRIVLEAVEEEHTDPAIG 61 Query: 68 AFLRFLDADIQNNPQKTRPFNI-QQGKKLVAGMDVNIDDEIGDD 110 AFL + ADI + P ++ ++ + G++V++D I D Sbjct: 62 AFLAMMAADIAAGRVERLPDDLTDALRQALDGIEVDLDAPIEGD 105 >UniRef50_B9JRI7 Regulators of stationary/sporulation gene expression protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JRI7_AGRVS Length = 102 Score = 82.8 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + +S +T +GQTTIPA +R+ L LKPG D + Y + G+ + Sbjct: 1 MAIYDSTITSKGQTTIPAEIRDMLGLKPG-DKVRYVTQGNRVYLRVKNGNAMQ------- 52 Query: 70 LRFLDADIQNNPQKTRPFNIQQGKKLVAG 98 L L D P + G+ L Sbjct: 53 LAGLLHDPSRPPMSLEEMDAAIGESLAED 81 >UniRef50_UPI0001903C04 AbrB family transcriptional regulator n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001903C04 Length = 86 Score = 82.4 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 +T +GQTTIPA VRE L LK G D I Y I G++ M D L Sbjct: 7 TMTSKGQTTIPAEVRELLNLKSG-DRIRY-INRDGEIIMKAKNKRAID------LAGKFH 58 Query: 76 DIQNNPQKTRPFNIQQGKKLVAGMD 100 D + + + G+ + A ++ Sbjct: 59 DPKRRAITLKEMDEAIGEAIAAHVN 83 >UniRef50_A7HQV0 Transcriptional regulator, AbrB family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HQV0_PARL1 Length = 80 Score = 70.8 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 +K+T +GQ T+PA +R AL L+ G D + + G+ ++ D D LR + Sbjct: 5 AKLTSKGQITLPAEMRRALNLQEG-DKVVFAQGEDGRFYLEAKTDSLGD------LRGVV 57 Query: 75 ADIQNNPQKTRP-FNIQQGKK 94 ++ P + +G++ Sbjct: 58 KGVKAKPGEIESWIEEARGRR 78 >UniRef50_D2M9W9 Transcriptional regulator, AbrB family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M9W9_RHOPA Length = 84 Score = 70.4 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + VT++GQ T+P VR+A +KPG D + G +++ + E +L+ L Sbjct: 3 TTVTVKGQVTLPKKVRDAAGIKPG-DKVEIRNTASGGIYIGKKESE------GEYLKKLQ 55 Query: 75 ADIQNNPQKTRPFNIQQ 91 A + +P + +I + Sbjct: 56 AIAKRHPIRGSTDDIMR 72 >UniRef50_C7RTQ9 Transcriptional regulator, AbrB family n=2 Tax=Betaproteobacteria RepID=C7RTQ9_9PROT Length = 72 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 + TE+ +T +GQTTIP +R++L++K G D + + ++P G V M D L Sbjct: 1 MATEATLTSKGQTTIPKEIRDSLRMKAG-DRMTFTLMPDGTVVMRVKSKRFND------L 53 Query: 71 RFLDADIQNNPQKTRPFNI 89 + + +I Sbjct: 54 AGMLYEEGREAVSIEQLSI 72 >UniRef50_A9A0K1 Transcriptional regulator, AbrB family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0K1_DESOH Length = 82 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + +T +GQ TIP VR+AL L G D + + + G+V + +D Sbjct: 4 ATLTGKGQITIPVSVRQALGLHAG-DKLEFVLNENGEVICKPVVKRVDD-VFGR-----L 56 Query: 75 ADIQNNPQKTRPFNIQQGKKL 95 + +KL Sbjct: 57 HKPGRKTVSVEAMDAAIRRKL 77 >UniRef50_Q28MY6 Transcriptional regulator, AbrB family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MY6_JANSC Length = 79 Score = 69.3 bits (168), Expect = 3e-11, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 S++T +GQTT+P VR+AL LKPG D +HY +LP G V M ++ L Sbjct: 3 HSRITSKGQTTVPKEVRQALGLKPG-DLVHYIVLPSGDVRMIAKRPAKD-------LSGF 54 Query: 74 DADIQNNPQKTRPFNIQQGKKLV 96 D + V Sbjct: 55 LHDPKRPAVALDAIEAAIAAGPV 77 >UniRef50_C9AZZ6 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9AZZ6_ENTCA Length = 91 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 +K+T + Q TIP VR+ L LK I +E P G++ ++ E+ + AF Sbjct: 5 AQVSAKMTSKNQITIPKSVRQILGLKENHWVI-FEFTPEGEI---KVRGEKAAPSFEAFW 60 Query: 71 RFLDADIQN 79 + A I+ Sbjct: 61 KQELAIIEE 69 >UniRef50_B4SH74 Transcriptional regulator, AbrB family n=3 Tax=Chlorobium/Pelodictyon group RepID=B4SH74_PELPB Length = 82 Score = 67.7 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 + + +T +GQ TIP VRE L G D + + GG + + + ++ L Sbjct: 1 MSIATLTSKGQVTIPKEVREIFGLHSG-DKLDFSCDHGGHIVVTPIKKNVDE------LF 53 Query: 72 FLDADIQNNPQKTRPFNIQQGKK 94 + + T N +K Sbjct: 54 GKLYNPERKALSTEAINKAIRQK 76 >UniRef50_A7IQ61 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=A7IQ61_XANP2 Length = 177 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Query: 28 PVREALKLKP---GQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKT 84 R+ K++ G S+ + P G+ + D + A+L FL+ D+ +P+ Sbjct: 88 EFRQRAKIRAQVIGPGSLLVTLDPNGEE--ETRDGVERDPVVAAYLSFLERDMGEHPEGL 145 Query: 85 RPF---NIQQGKKLVAGMDVNIDDEIGDD 110 RPF +I + + L ++V+ DD I DD Sbjct: 146 RPFTEADITRLQALTGNVEVSDDDVIPDD 174 >UniRef50_A9D138 Transcriptional regulator, AbrB family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D138_9RHIZ Length = 88 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 + ESK+T +GQTTIP VRE LK+ G D I YE + G+V + D F Sbjct: 1 MGVESKITAKGQTTIPMEVREYLKVGVG-DRIGYEFV-DGKVVLVPKNRSALDFAGALF- 57 Query: 71 RFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNID 104 + P N G+ + + + D Sbjct: 58 -----EPNREPVSIEAMNEAVGEAVSDRYERSYD 86 >UniRef50_B2GF59 Putative uncharacterized protein n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GF59_LACF3 Length = 86 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 A+ + SK+T + Q T+P VR+AL LK D + + G + + + + Sbjct: 3 AMASVISKITAKNQVTVPKQVRQALGLKE-HDQLRWIAKDDGSIEVKKANNND 54 >UniRef50_Q3J855 Transcriptional regulator, AbrB family n=5 Tax=Proteobacteria RepID=Q3J855_NITOC Length = 89 Score = 65.0 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + +T +GQ T+P +R+ L L+PG ++ + + P G+V + D + + F Sbjct: 3 TTLTSKGQVTVPKKIRDYLGLRPGS-AVDFSLGPHGEVILRPAEDTPPERRKDRF 56 >UniRef50_C1F8G8 Transcriptional regulator, AbrB family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8G8_ACIC5 Length = 83 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT---MN 67 + S V+ +GQ TIP +R L LK G D + + + V + ++E+ + Sbjct: 1 MALTSTVSSKGQVTIPREIRTRLGLKEG-DRVEFVVEDDKTVL--KPAQDEENPFRAWVG 57 Query: 68 AFLRFLDAD 76 AF F + + Sbjct: 58 AFPAFKNRE 66 >UniRef50_A1HMB3 Transcriptional regulator, AbrB family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMB3_9FIRM Length = 90 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + VT +GQ TIP PVR+ L + P + + + G V + R + + ++ + Sbjct: 10 ATVTEKGQVTIPKPVRDYLGV-PNGGKVRFRVRYDGVVVVERPTTAAQ--VIGRLQKYAN 66 Query: 75 ADIQNNPQKTRP-FNIQQGKKL 95 + N + R + K+L Sbjct: 67 TEKIVNAYELRENMESDRRKEL 88 >UniRef50_B3EQR0 Transcriptional regulator, AbrB family n=2 Tax=Chlorobium RepID=B3EQR0_CHLPB Length = 89 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 + +T +GQ TIP VR+AL L+ G D + + GG + + + D Sbjct: 4 ATMTNKGQVTIPKKVRDALHLQSG-DKLEFVCEEGGIITVRPVKKSV-DEVFGK 55 >UniRef50_Q216J9 Transcriptional regulator, AbrB family n=4 Tax=Rhodopseudomonas palustris RepID=Q216J9_RHOPB Length = 85 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 + VTI+GQ T+P VR+A +KPG D + G +F+ + G E + +L+ Sbjct: 1 MSTTVTIKGQITLPKKVRDAAGIKPG-DKVEIRNTASGGIFIGKSGSEAD------YLKK 53 Query: 73 LDADIQNNPQKTRPFNIQQGK 93 L A + P + + Sbjct: 54 LQAIAKRYPIHGSTTDEIMLE 74 >UniRef50_Q1NTN6 Transcriptional regulator AbrB n=3 Tax=Bacteria RepID=Q1NTN6_9DELT Length = 79 Score = 63.1 bits (152), Expect = 2e-09, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 + VT +GQ TIP +R+ LKLK G + + + P G V + E Sbjct: 1 MATTTVTSKGQVTIPKEIRDYLKLKKG-GRLEFLVDPEGVVRIAPATAE 48 >UniRef50_A6FMC9 Transcriptional regulator, AbrB family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMC9_9RHOB Length = 83 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 ES VT++GQTT+P VR AL L G D + Y IL G+V + + +E LR + Sbjct: 3 ESTVTVKGQTTLPKDVRVALGLTSG-DKVRYLIL-DGEVRILKARSVKE-------LRGI 53 Query: 74 DADIQNNPQKTRPFNIQQGKKLVAGMDVN 102 + P + MD + Sbjct: 54 LSRSDQKPVSLEEMDEAISAGATDSMDPD 82 >UniRef50_A2SP91 Transcriptional regulator, AbrB family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SP91_METPP Length = 78 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT 65 ++ + ++++GQ TIP +RE L L+ G D I + IL G V + D Sbjct: 3 AMSEPTTMSVKGQVTIPRDIRERLGLQAG-DKIAWTILSNGTVVVRPKTRRLSDLV 57 >UniRef50_A1VWC3 Transcriptional regulator, AbrB family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWC3_POLNA Length = 74 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 ++S + +GQ TIPA +R AL L D + ++P G V + D Sbjct: 1 MSQSTLNSKGQITIPADIRRALGL-VDHDRLTLTLMPNGTVLLRAKNKSILD 51 >UniRef50_Q8GAS3 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=Q8GAS3_LACPL Length = 88 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTM 66 + V SK+T + Q TIP VRE LK++ D+I ++I P G+V + R + Sbjct: 4 AGNVTKVSSKITSKNQITIPKTVRELLKVRS-TDTIEWQIEPNGKVMIVRSKPDLWQLVD 62 Query: 67 NAFLRF 72 +F Sbjct: 63 EQEKKF 68 >UniRef50_D1C4M8 Transcriptional regulator, AbrB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4M8_SPHTD Length = 97 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 + + V+ +GQ TIPA VR L + PG + + I G V M R Sbjct: 1 MTEIIATVSSKGQITIPAAVRRPLGVAPG-GKVVFAISDEGIVTMRRAA 48 >UniRef50_Q2S601 Transcriptional regulator, AbrB family protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S601_SALRD Length = 98 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 S +T RGQTTIP P+REAL L+PG D + + IL G +V + R G + L + Sbjct: 3 TSTLTTRGQTTIPKPIREALGLQPG-DRVEF-ILHGDRVLLRRAGADLSA------LDGM 54 Query: 74 DADIQNNPQKTRPFNIQQGKKLVAG 98 P T + G + G Sbjct: 55 LDRSGQEPVSTGEMDNAIGTAISEG 79 >UniRef50_C8WTC8 Transcriptional regulator, AbrB family n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WTC8_ALIAD Length = 96 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 ++T+ +K++ +GQ T+PA +R AL L+ G D + +++ G+VF+ L + + Sbjct: 1 MVTSIAKISPKGQITLPAEIRRALNLREG-DRVVFQVSNDGKVFISGLPSYDPETVIG 57 >UniRef50_B8GQR7 AbrB family transcriptional regulator n=2 Tax=Bacteria RepID=B8GQR7_THISH Length = 82 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 ++T +GQ TIP VRE+L L PG I +++ GQ+ + ++ Sbjct: 4 RLTSKGQVTIPKKVRESLGLGPGS-QIDFDVDEQGQIIIRKVQGR 47 >UniRef50_A6DSW9 Transcriptional regulator, AbrB family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSW9_9BACT Length = 81 Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 7/80 (8%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + +T +GQ TIP +R+ L L G D I G+ + + + +D L + Sbjct: 4 ATITTKGQVTIPKDIRDYLHLHQG-DKIEIVANDKGEAIIRPISKKVDD------LYGIL 56 Query: 75 ADIQNNPQKTRPFNIQQGKK 94 + N + Sbjct: 57 KRPKQKAVSVEEMNQVIKNR 76 >UniRef50_B4WB31 SpoVT / AbrB like domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB31_9CAUL Length = 90 Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 + S++T + QTTIP PVR ALKL+ G D + YEI G +V + + D Sbjct: 17 EAMMITSRLTSKAQTTIPQPVRAALKLQDG-DELIYEIE-GERVLLKKARKTAADDPFAT 74 Query: 69 F 69 F Sbjct: 75 F 75 >UniRef50_Q1MDL1 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q1MDL1_RHIL3 Length = 92 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 VT +GQ T+ V + L ++PG D I ++LPGG++ + + ++ +F Sbjct: 1 MATLTVTAKGQVTLKKEVLQHLGVRPG-DKIDVDLLPGGKLEVIAVERRPVAGSVESFFG 59 Query: 72 FLDADIQNNPQKTRPFNIQQGKKLVAGMDVNID 104 L+ + + + V+ D Sbjct: 60 SLENKENIHA-TLEEIDEAIKAGWAGEVGVDND 91 >UniRef50_B2IWV2 Transcriptional regulator, AbrB family n=3 Tax=Cyanobacteria RepID=B2IWV2_NOSP7 Length = 82 Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 7/83 (8%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 + + ++ +GQ TIP +R+ L L G + + I G V + L + L Sbjct: 1 MMASATISTKGQVTIPKEIRDYLNLDTGS-KVDFVIDENGIVKLIPLNISIQS------L 53 Query: 71 RFLDADIQNNPQKTRPFNIQQGK 93 + + Sbjct: 54 SGILHRPGMKSATLEEMEAAIKE 76 >UniRef50_A4JA89 Transcriptional regulator, AbrB family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JA89_BURVG Length = 71 Score = 58.1 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT 65 ES++ RGQTT+PA VR AL + PG + + + G VF+ + Sbjct: 1 MESRINARGQTTVPAKVRMALGVGPGT-QLTWVLTLDGDVFVRVKSSSVRELA 52 >UniRef50_B1I0L1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0L1_LYSSC Length = 195 Score = 58.1 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILP-GGQVFMCRLGD 59 T + +T +GQ T+P +RE LK+ G D+I + P V + + G Sbjct: 1 MTTATLTSKGQLTVPKEIREFLKIDTG-DTIEFVTDPKTNSVTISKKGK 48 >UniRef50_B1YFZ1 Transcriptional regulator, AbrB family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFZ1_EXIS2 Length = 72 Score = 58.1 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 SK+T +GQ TIP +R+AL+++ G D + + I G V M + Sbjct: 4 SKLTSKGQITIPKKIRQALQVEEG-DRVAF-IEEDGFVIMAKAD 45 >UniRef50_A8IKJ3 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IKJ3_AZOC5 Length = 72 Score = 58.1 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 S++T + QTTIP PVR AL+LK G D I Y I V D F Sbjct: 1 MITSRLTTKAQTTIPQPVRNALQLKEG-DEIAYAIEGDHVVIRKAKPTLPTDDPFATF 57 >UniRef50_A4BR24 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BR24_9GAMM Length = 76 Score = 57.7 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 S +T + Q TIP VR L LKPG D + + + GQV + R + E Sbjct: 3 TSTLTSKCQVTIPVHVRRMLGLKPG-DQVAFVVE-DGQVRVVRGENRIE 49 >UniRef50_B2JT84 Transcriptional regulator, AbrB family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JT84_BURP8 Length = 72 Score = 57.3 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 S + G+TT+PA VR A+ +KPG +H+ ++P G V + Sbjct: 3 TSTIDAYGRTTLPAAVRSAVGVKPGT-KLHWHLMPDGSVLVRIKTKS 48 >UniRef50_B3QXW1 Transcriptional regulator, AbrB family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXW1_CHLT3 Length = 84 Score = 57.3 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 7/86 (8%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + + +T +GQ TIP +R++LKL+ G D I I + + + ++ Sbjct: 1 MTMALATITSKGQVTIPKKIRDSLKLRTG-DKIEIVITDKMEAVIRPISKTVDE------ 53 Query: 70 LRFLDADIQNNPQKTRPFNIQQGKKL 95 L + N ++ Sbjct: 54 LFCKLHKPEQKAFSVEEINNAIQNRM 79 >UniRef50_A5VG03 Transcriptional regulator, AbrB family n=2 Tax=Proteobacteria RepID=A5VG03_SPHWW Length = 74 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 SK+T + Q TIPA VR+ L +K G D + +E+ G+V + + Sbjct: 4 SKLTAKNQVTIPADVRQQLGVKSG-DHVAFEVE-DGKVIVRKARA 46 >UniRef50_C7T7Z6 Transcriptional regulator, AbrB family n=6 Tax=Lactobacillus RepID=C7T7Z6_LACRG Length = 101 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 E+ VT +GQ TIPA +R +K + + ++ G V M Sbjct: 26 LEATVTSKGQVTIPAEIRRRSGIKKNT-KVRFNMMEDGTVQMR 67 >UniRef50_B4ABX3 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4ABX3_SALNE Length = 76 Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 68 AFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 FL F+ DI PQ PF++ +G++LVA M VNIDD+I D+ Sbjct: 33 TFLGFISNDINEFPQNVLPFDMSRGRELVADMGVNIDDDICDE 75 >UniRef50_B8GLG7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLG7_THISH Length = 79 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 S +T +GQ T+P +RE L L+ G D + + I G+V + + Sbjct: 3 STLTSKGQVTLPKALRERLHLRTG-DKVEFLIHEDGRVELLPVTA 46 >UniRef50_B1XZE7 Transcriptional regulator, AbrB family n=6 Tax=Burkholderiales RepID=B1XZE7_LEPCP Length = 75 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 +E+ +T +GQ TIPA +R+A+ + QD I + L G + M Sbjct: 1 MSEATLTSKGQITIPADIRKAMGVTA-QDRIVFTRLDDGTIVMRAKT 46 >UniRef50_Q210F7 Transcriptional regulator, AbrB family n=2 Tax=Rhodopseudomonas palustris RepID=Q210F7_RHOPB Length = 94 Score = 54.6 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 5/86 (5%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 + VT +GQ T+PA +RE L + G D + +++ G++ + + F Sbjct: 4 KASATVTSKGQITLPASIRERLGVTAG-DRLDFDLSASGRLTVTAVKRRS---IFENF-D 58 Query: 72 FLDADIQNNPQKTRPFNIQQGKKLVA 97 L + P + + +V Sbjct: 59 ELQLPSRGRPSTRKDIDDAITATIVE 84 >UniRef50_C9RXL6 Transcriptional regulator, AbrB family n=2 Tax=Geobacillus RepID=C9RXL6_GEOSY Length = 97 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTM 66 SH T S ++ + Q TIP +RE L +PG D + + +V + + Sbjct: 5 SHETYTYYSTLSSKHQVTIPMKIREVLGAEPG-DQVAFVYGENQEVTLKVKKKDALLSLF 63 Query: 67 NAFL 70 Sbjct: 64 GTMP 67 >UniRef50_Q0B3P9 Transcriptional regulator, AbrB family n=12 Tax=Proteobacteria RepID=Q0B3P9_BURCM Length = 81 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 9/84 (10%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILP-GGQVFMCRLGDEQEDHTMNAFL 70 T + +T +GQ TIP VR L L G D I + G+ + L Sbjct: 1 MTAATITSKGQVTIPVDVRNQLGLASG-DRIEFSFNETTGRYEIYPATRSLAS------L 53 Query: 71 RFLDADIQNNPQKTRPFNIQQGKK 94 + + P N ++ Sbjct: 54 KGIVKKPAK-PVSIEDMNRAIAEQ 76 >UniRef50_B1I1W7 Transcriptional regulator, AbrB family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1W7_DESAP Length = 88 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 +++T +GQ TIP VR L L+PG D + +++ P G+V + Sbjct: 4 ARLTSKGQITIPVIVRRKLNLQPG-DELVFDLGPDGEVKVRA 44 >UniRef50_A5KRY2 Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRY2_9BACT Length = 113 Score = 52.7 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 + + +T +G TI A +R+AL KPGQ I+ + Q+ + + F Sbjct: 25 MKYTTTMTSKGTITIAAHLRKALGFKPGQ-KINLTLDENRQIIIGGGTT------VADFE 77 Query: 71 RFLDADIQNNPQKTRPFNIQQGKKLVAGMDVN 102 + ++ P + Q K A VN Sbjct: 78 ELRNKIVKKIPNHKKGLTGQALKDAAAKAWVN 109 >UniRef50_C7NG53 Looped-hinge helix DNA binding domain, AbrB family n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NG53_KYTSD Length = 85 Score = 52.7 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 + ++ +GQ T+P VREAL L G + +E G+ + + Sbjct: 1 MVMATMSSKGQVTMPKEVREALHLATGS-RVVFEPAGEGEYVVRAVRGS 48 >UniRef50_Q3J9J2 Transcriptional regulator, AbrB family n=5 Tax=Bacteria RepID=Q3J9J2_NITOC Length = 82 Score = 52.3 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 VT +GQ TIP VRE L + P D I + I G+ ++ + Sbjct: 12 TMTVTAKGQVTIPRNVRETLGITPETD-IDF-IEDNGRFYIAKADG 55 >UniRef50_D2PF52 Transcriptional regulator, AbrB family n=6 Tax=Sulfolobus islandicus RepID=D2PF52_SULIS Length = 99 Score = 52.0 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 E+ VT + Q TIP VREAL +K G D + ++ G++ M + + Sbjct: 18 ETVVTRKYQVTIPKEVREALGIKMG-DKLIVKVE-DGKIIMEPVRAQDA 64 >UniRef50_A1B6W4 Transcriptional regulator, AbrB family n=2 Tax=Alphaproteobacteria RepID=A1B6W4_PARDP Length = 94 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 + +T +GQ TIP VR + L PG D + + + G + Sbjct: 18 TATITSKGQITIPQKVRLDMGLTPG-DRVDFVRMDDGHYAVVPAS 61 >UniRef50_Q73RP8 Transcriptional regulator, AbrB family n=1 Tax=Treponema denticola RepID=Q73RP8_TREDE Length = 82 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 +K+T +GQ TIP +R L LK G D + +E G+V++ Sbjct: 4 AKLTSKGQITIPLAIRNMLGLKTG-DKVFFE-ESRGKVYITNASQ 46 >UniRef50_Q5KXG5 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KXG5_GEOKA Length = 89 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 + SK++ RGQ IPA +R+ L L G D + + + G++ + Sbjct: 1 MKATSKLSSRGQVVIPAEIRKTLGLAEGDD-LTFIVNEDGEIKVE 44 >UniRef50_UPI0001C31534 transcriptional regulator, AbrB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31534 Length = 82 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 + + +++T +GQ TIP VR+AL L G D I + + V Sbjct: 1 MESSARLTSKGQVTIPKAVRDALDLHEG-DEILFRVERKRAVVAKTPD 47 >UniRef50_B3Q5K6 Hypothetical conserved protein n=2 Tax=Rhizobium etli RepID=B3Q5K6_RHIE6 Length = 73 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + VT +GQ IP PVR+ L + G + + G+V + R D Sbjct: 3 TTVTAKGQVPIPKPVRDMLGIVAGS-KVDFHRAADGRVVLVRAVD 46 >UniRef50_C6LC19 Toxin-antitoxin system, antitoxin component, AbrB famil n=2 Tax=Bryantella formatexigens DSM 14469 RepID=C6LC19_9FIRM Length = 88 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + +K++ GQ T+P +R L LK G D I + G++ + + +AF Sbjct: 2 IFMNLAKISANGQITVPVEIRRLLGLKSG-DKILFFQKQDGEIVVSNASSQAIRKAQSAF 60 >UniRef50_A1BGZ2 Transcriptional regulator, AbrB family n=2 Tax=Chlorobium RepID=A1BGZ2_CHLPD Length = 74 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 +T +GQTTIPA +R+A+KL+ G D + +E+ V M ++ +D Sbjct: 6 ITSKGQTTIPASIRKAVKLEEG-DRVLFEVKED-YVIMRKIKLPADD 50 >UniRef50_A7HWC1 Transcriptional regulator, AbrB family n=4 Tax=Rhizobiales RepID=A7HWC1_PARL1 Length = 79 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 VT +GQ TIP VR+ L +KPG + +E G+ + G + Sbjct: 5 VTSKGQVTIPKAVRDRLGIKPGT-EVQFEPTEDGRFLLTTAGRK 47 >UniRef50_C0GTY3 Transcriptional regulator, AbrB family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTY3_9DELT Length = 91 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 + ESKVT +GQ TIP +R+++ + + + L G V + Sbjct: 1 MALESKVTSKGQVTIPRDIRDSMGIGS-AGRVSFTDLGNGLVLIR 44 >UniRef50_Q1Q0K6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0K6_9BACT Length = 89 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ++ +GQ IP +R+ L +K G D + Y+I G++ + + Sbjct: 5 TISSKGQIAIPKEIRDFLHIKEG-DRLVYKIDR-GRIVLEPVVS 46 >UniRef50_C5D932 Transcriptional regulator, AbrB family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D932_GEOSW Length = 103 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 3 ANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 A+ + + V+ S+++ RGQ IP +R+ L L G D + + + G++ + + ++ Sbjct: 7 ADHQPNVVVKATSRLSSRGQVVIPIEIRKTLGLTEGDD-LTFILNKDGEIKVEVVKKQRV 65 Query: 63 DHTMN 67 + Sbjct: 66 SELLG 70 >UniRef50_UPI0001C392F3 AbrB family transcriptional regulator n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C392F3 Length = 85 Score = 50.0 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 3/85 (3%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 +++T G TIP + + L LKPG D I+ I P G+V++ + L Sbjct: 4 TRITATGTATIPPEIIDWLHLKPG-DQINIAISPDGKVYLEPAPKAAQIDV--RTLSGCL 60 Query: 75 ADIQNNPQKTRPFNIQQGKKLVAGM 99 D + V M Sbjct: 61 YDPDRKTVSLAEMEQAIVEGAVESM 85 >UniRef50_C8WSV3 Transcriptional regulator, AbrB family n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WSV3_ALIAD Length = 90 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 +T S ++ +GQT IPA +R L +PG D I +E++ G+V + + + + Sbjct: 1 MTAFSTLSRKGQTVIPAEIRRLLGAEPG-DHIVFEVV-DGEVRLRVAKRKSLRSLLGSLP 58 Query: 71 RFLDADIQ 78 DI Sbjct: 59 GTGPEDIS 66 >UniRef50_Q6MR51 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MR51_BDEBA Length = 117 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 SK + + QTTIPA VR+AL + G D++ + + +V + + +Q D T + L Sbjct: 43 ATSKASRKNQTTIPARVRQALGIAKG-DTLLWTVNGD-EVNIRIINRKQVDWTKTSELSL 100 Query: 73 LD 74 L+ Sbjct: 101 LE 102 >UniRef50_Q2ESN6 Putative uncharacterized protein n=5 Tax=Bacillus thuringiensis RepID=Q2ESN6_BACTU Length = 110 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQ-VFMCRLGD 59 S ++ +GQ TIPA +R+ + K G D I + I V + + Sbjct: 29 QFTSTLSQKGQVTIPAKIRDYIDAKAG-DQIQFVIEGDNVFVNVVKKNS 76 >UniRef50_A5G781 Transcriptional regulator, AbrB family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G781_GEOUR Length = 81 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 S VT +GQ TIP +R+ L ++ D + + + + + Sbjct: 3 STVTSKGQVTIPKEIRDLLHIRSN-DKVDFVLDGDRVLLVPVKT 45 >UniRef50_D1YWH1 Putative AbrB family transcriptional regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YWH1_METPS Length = 81 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 + + SKV+ + Q T+PA VR+ L + PG D + + V R + + F Sbjct: 1 MDASSSKVSSQNQITLPAEVRDRLGIGPG-DKVVFVEEDDKVVI--RNLKDLIYEVVEGF 57 Query: 70 LRFLDAD 76 F D Sbjct: 58 KDFDKTD 64 >UniRef50_Q2RKN2 Transcriptional regulator, AbrB family n=2 Tax=Clostridia RepID=Q2RKN2_MOOTA Length = 92 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD----EQEDHT 65 ++T +GQ TIP VRE L LK G D + + ++ + ++ QED Sbjct: 9 RLTSKGQMTIPQSVRETLGLKAG-DYLTILVDED-EIRLRKVQPVKPLSQEDPI 60 >UniRef50_B7R4T0 Transcriptional regulator, AbrB family protein n=1 Tax=Thermococcus sp. AM4 RepID=B7R4T0_9EURY Length = 82 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 9/80 (11%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG--------DEQEDHTMNA 68 VT + Q TIP VREAL +K G D + + V M D T+ Sbjct: 4 VTKKYQVTIPKEVREALGIKAG-DEVVFVREGNRYVLMKLTDLLKELSEITSDIDETVEE 62 Query: 69 FLRFLDADIQNNPQKTRPFN 88 + L I+ + ++ Sbjct: 63 VRQGLARGIERSLRELEGEE 82 >UniRef50_B5YIC5 SpoVT / AbrB like domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIC5_THEYD Length = 88 Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 S +T + Q TIP +RE LK+ G D++++ I +V + + + E+ Sbjct: 8 SALTKKYQITIPKKIREFLKINKG-DTVNFIIE-NNEVKLKPVRSKIEE 54 >UniRef50_B9MMB7 Transcriptional regulator, AbrB family n=7 Tax=Clostridia RepID=B9MMB7_ANATD Length = 89 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 ++ SK+T +GQ +PA +R+ + DS+ + + G+V + + ++ Sbjct: 1 MIQARSKITGKGQLQLPAEIRKIIG-GEIGDSVLFTVQDDGKVIIEVIKKKK 51 >UniRef50_C2KQP5 Regulator of stationary/sporulation gene expression n=3 Tax=Bacteria RepID=C2KQP5_9ACTO Length = 94 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 +KVT +GQ TIP VR L +K G I + V + Sbjct: 4 AKVTAKGQITIPIAVRRKLGVKTG-GKIMFLEDGDRVVIVNP 44 >UniRef50_C6PD28 Transcriptional regulator, AbrB family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PD28_CLOTS Length = 94 Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 +KVT +GQ TIP +R+ L LK G D + + +F Sbjct: 6 IAKVTSKGQITIPIDIRKKLNLKDG-DKVIFIEEGDKIIFANAAK 49 >UniRef50_C8S731 Transcriptional regulator, AbrB family n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S731_FERPL Length = 99 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 8/73 (10%) Query: 20 RGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQN 79 +GQ TIP +R+ L LK G+ + +EI +V + ++ ++ L ++N Sbjct: 25 KGQVTIPKEIRDKLGLKEGE-KVVFEIRGD-EVIIKPEKKGKD------YVDELSNIVKN 76 Query: 80 NPQKTRPFNIQQG 92 + P +++ Sbjct: 77 KLEAPEPEKLKRL 89 >UniRef50_B5IRE8 Transcriptional regulator, AbrB family protein n=1 Tax=Thermococcus barophilus MP RepID=B5IRE8_9EURY Length = 80 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 VT + Q TIP VREAL +K G D + + G V M Sbjct: 3 TVTRKYQVTIPKEVREALNIKAG-DEVVFVKTKEGYVIMK 41 >UniRef50_A4YFZ2 Transcriptional regulator, AbrB family n=2 Tax=Sulfolobaceae RepID=A4YFZ2_METS5 Length = 74 Score = 47.3 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 KVT + Q TIP VR+ + LKP + + L ++ + R +D + L Sbjct: 3 KVTKKYQVTIPEDVRKKIGLKP-FEEVEVVALNDNEILVRRKLRTVKDPL--SILFGSQT 59 Query: 76 DIQNNPQKTRPF 87 D++ P+K F Sbjct: 60 DVEVPPEKVDEF 71 >UniRef50_B5VXE3 SpoVT/AbrB domain protein n=1 Tax=Arthrospira maxima CS-328 RepID=B5VXE3_SPIMA Length = 85 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 +++T G TIP + + L+LKPG D I+ I P G+V++ + + L Sbjct: 4 TRITPEGTATIPPEILDWLQLKPG-DPINIAISPDGKVYLEPVPKAAKIDV--RTLSGCL 60 Query: 75 ADIQNNPQKTRPFNIQQGKKLVAGM 99 D P + M Sbjct: 61 YDPDRKPVSLAEMEQAIAEGAGESM 85 >UniRef50_Q0W2F1 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2F1_UNCMA Length = 78 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVF 53 + + SKV+ + Q T+P VR+ L +KPG D + + V Sbjct: 1 MESVSSKVSSQNQITLPGDVRKKLGVKPG-DKVVFIEEDDRIVI 43 >UniRef50_B9ZBJ2 Transcriptional regulator, AbrB family n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZBJ2_NATMA Length = 94 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 +VT +GQ TIP +REAL ++PG D + +E + G + + D Sbjct: 3 RVTTKGQVTIPKEIREALGIEPG-DEVAFEEVRSG-YKIRKKEPTTAD 48 >UniRef50_Q3QZK3 Transcriptional regulator AbrB n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3QZK3_XYLFA Length = 88 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 4/83 (4%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 + VT RGQ T V + L +KPG+ I ++LP G+ + + + FL+ Sbjct: 1 MSTLTVTARGQVTFRKEVLQHLGIKPGE-RIELDLLPDGRAELKAAQPKGSFQELRGFLK 59 Query: 72 FLDADIQNNPQKTRPFNIQQGKK 94 + N + Sbjct: 60 GKTNGAR---LSIEEINDAIAEA 79 >UniRef50_C8S7I2 Transcriptional regulator, AbrB family n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7I2_FERPL Length = 51 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 + ++ + Q TI +RE L L G D + + + G++ + + Sbjct: 11 ATLSSKYQITITKAIREKLGLTAG-DRVVF-VEKDGEIILRKA 51 >UniRef50_B5INF0 Transcriptional regulator, AbrB family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF0_9CHRO Length = 77 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 S +T RGQT IPAP+RE L P Q + + + G + + + Sbjct: 3 STITARGQTVIPAPIRERFALSPSQ-RLEWLVEADGTIRVVPVDASP 48 >UniRef50_Q0AVI2 Regulators of stationary/sporulation gene expression n=4 Tax=Clostridia RepID=Q0AVI2_SYNWW Length = 91 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 +KVT+RGQ TIP +R+ LK+K G D + + + G++ M Sbjct: 4 AKVTVRGQITIPIEIRKKLKIKDG-DKVVF-VEENGKIIMENAA 45 >UniRef50_A3JJF9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJF9_9ALTE Length = 81 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 ++ ES V+ +GQ IP +R AL ++ G D + + + G + + + Sbjct: 1 MIRGESTVSEKGQLVIPREIRHALDVQRG-DKLAWVVEDDGTLRVTIAKGD 50 >UniRef50_B2SVA5 SpoVT / AbrB like domain protein n=17 Tax=Proteobacteria RepID=B2SVA5_XANOP Length = 82 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQD-SIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 E+ V RGQ T+P VR+AL L G I L GG++ + + E F Sbjct: 1 MEATVAERGQITLPKAVRDALGLTKGTTLKIE---LDGGRIILRKDVSEALRKVRGKF 55 >UniRef50_O28268 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28268_ARCFU Length = 86 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 V +GQ TIP +RE LK G+ + +EI G + R D ++ L Sbjct: 4 TRTVGKKGQVTIPKEIREKFGLKEGE-KVVFEIR--GDEIILRPEKSGRD-----YVEEL 55 Query: 74 DADIQNNPQKTRPFNIQQG 92 + I+ + P +++ Sbjct: 56 TSIIEKKLEAPEPAELKRL 74 >UniRef50_C6AVT7 Transcriptional regulator, AbrB family n=5 Tax=Rhizobiales RepID=C6AVT7_RHILS Length = 87 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGG---QVFMCRLGDEQED 63 +VT +GQ TIP +R+ LK+ PG + + G V R+ Q+D Sbjct: 2 RVTEKGQVTIPKDIRDRLKIGPGS-EVDFVADEKGARLVVLSSRIEPSQDD 51 >UniRef50_B9LVR8 Transcriptional regulator, AbrB family n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVR8_HALLT Length = 93 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 7/96 (7%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGG-QVFMCRLGDEQEDHTMNAFLRFLD 74 ++T +GQ TIP +RE L ++PG D I +E + G ++ + + + Sbjct: 3 RITTKGQVTIPKEIRETLGIEPG-DEIAFEEVSSGYKIQKKEPTTADGNDPFAKYRGSAE 61 Query: 75 ADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD 110 +D + P++ R ++ + + DDE + Sbjct: 62 SD-ETMPERMRRL----RREYPRDVGDDCDDESEAE 92 >UniRef50_UPI0001C31CD2 transcriptional regulator, AbrB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CD2 Length = 84 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE--DHTMNA 68 KV +GQ +P +RE L ++PG D + ++ G++ + + + + D M + Sbjct: 1 MTYKVGAKGQVVLPKAMRERLGIRPG-DEVLFD-EGDGEITVRKAKSKAQLVDELMGS 56 >UniRef50_A1HRH9 Transcriptional regulator, AbrB family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRH9_9FIRM Length = 92 Score = 45.8 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 17 VTIRGQTTIPAPVREALKLKPG-QDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 V+ +GQ T+P PVRE L +K G + + G V + + T+++ L Sbjct: 8 VSSQGQITLPKPVRERLGIKSGKPSRVTIHVRGDGAVVIEP------EPTVDSLFGILKP 61 Query: 76 DIQNNPQKTRPFNIQ 90 P Sbjct: 62 ASPVKPANIYEIREA 76 >UniRef50_B7K1R8 Transcriptional regulator, AbrB family n=2 Tax=Cyanothece RepID=B7K1R8_CYAP8 Length = 86 Score = 45.8 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 T SK+T + Q TIP +RE L L G DS+ +E+ +V + ++ Sbjct: 14 TVSKLTQKYQATIPRRIREVLDLHQG-DSVIFELQDD-KVILKKV 56 >UniRef50_B0T0S0 SpoVT/AbrB domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T0S0_CAUSK Length = 87 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + E VT +GQ T+ V + L ++PGQ + ++LP G+V + Sbjct: 4 AMAAELSVTAKGQITLKRSVLDHLGVRPGQ-KVEVDLLPNGRVELRPANT 52 >UniRef50_A8UX28 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UX28_9AQUI Length = 78 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 +KV R Q IP +R+AL +K G D + +EI ++ + +L + Sbjct: 5 AKVGKRYQIVIPKEIRKALGIKEG-DWVLFEIEGD-EIRVRKLRN 47 >UniRef50_C7BP91 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BP91_PHOAA Length = 62 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 5/48 (10%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 + +T +GQ T P + +AL L G + +E+ + + Sbjct: 8 ATLTSKGQITSPKLIHQALGLDTGS-KLAFELHE----AVKKAEKNTP 50 >UniRef50_B8FB51 Transcriptional regulator, AbrB family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB51_DESAA Length = 111 Score = 45.0 bits (105), Expect = 6e-04, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 HAVLTTES-KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 + V+ + K+T G T+PA +R+AL LK G D ++ E+ G V ED Sbjct: 13 YEVMKMTTIKITSNGSVTLPARIRKALGLKVG-DFVNAELEEGRVVLKPAKIINAED 68 >UniRef50_C0GUG3 Transcriptional regulator, AbrB family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUG3_9DELT Length = 83 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 KV +GQ IP +R+AL +KPG DSI ++ R D+ E + L Sbjct: 4 KVFNKGQVVIPVEIRKALDIKPG-DSIEVNFDHERRLIQLRKPDKNESRVLAGSLAAYAK 62 Query: 76 DIQNNPQK 83 + P + Sbjct: 63 G-KQFPSR 69 >UniRef50_B6IUP8 Transcriptional regulator, SpoVT n=1 Tax=Rhodospirillum centenum SW RepID=B6IUP8_RHOCS Length = 88 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNA 68 A++ +V+ + QT +P VRE L+++PG D I Y++ G + + D Sbjct: 14 AIMAISRRVSTKVQTVLPLAVREHLRIRPG-DEIEYDLQEGYAILRPKRRAALADEPFAL 72 Query: 69 F 69 F Sbjct: 73 F 73 >UniRef50_C7RWC7 Transcriptional regulator, AbrB family n=7 Tax=root RepID=C7RWC7_9PROT Length = 83 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 5/81 (6%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 T VT RGQ T V + L ++PG D I ++LP G+ + T+++F+ Sbjct: 1 MTTLTVTARGQVTFRKDVLQHLGIRPG-DKIELDLLPDGRGVLKAAR---PAGTISSFVG 56 Query: 72 FLDADIQNNPQKTRPFNIQQG 92 L N Sbjct: 57 LLA-GRTQKVATIEEINEAAA 76 >UniRef50_D1BAR1 Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAR1_SANKS Length = 117 Score = 45.0 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 5 ARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 + SHA+ ++ + V +G+ +PA VR+AL + G D + + + G + Sbjct: 2 STSHALSSSFATVNAQGRIVVPAGVRQALGIASG-DRVEFLVDETGVRLITPR 53 >UniRef50_C7P402 Transcriptional regulator, AbrB family n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P402_HALMD Length = 81 Score = 45.0 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 + E+ V+ RG TIP+ +REAL ++ G D I + + G V + + + Sbjct: 7 TSDETTVSERGGVTIPSEIREALSIEAG-DKIRWTVEE-GDVMVEVVHQRE 55 >UniRef50_A7NN01 Transcriptional regulator, AbrB family n=8 Tax=Bacteria RepID=A7NN01_ROSCS Length = 69 Score = 44.6 bits (104), Expect = 8e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 + ++ + Q IP +RE +KPGQ + + + G ++ + + D + FLR + Sbjct: 3 TATISSKYQVVIPRAIREKWNVKPGQ-KVRFIV-YGNRLEIVPVRDLKTAR---GFLRGM 57 Query: 74 DADIQN 79 +DI+ Sbjct: 58 SSDIER 63 >UniRef50_Q1NK49 Transcriptional regulator AbrB n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NK49_9DELT Length = 77 Score = 44.6 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRF 72 ++ +T + QTTIP +RE LKL DS+ +++ GG++ + FL Sbjct: 1 MQTVITSKFQTTIPKKIREELKLLVN-DSLEWQVE-GGKIILA--------PLHKGFL-L 49 Query: 73 LDADIQNNPQKTRPFNIQQGKKLVA 97 I+ P +I + KK+ A Sbjct: 50 RKNSIKTGPGDIDR-DIARAKKIRA 73 >UniRef50_C0GFP3 Transcriptional regulator, AbrB family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFP3_9FIRM Length = 87 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ++K+T +GQ T+P VRE L++ G D I ++I G +V + L Sbjct: 1 MIKAKITGKGQITVPKEVREKLEVGYG-DYITFDI-SGKEVTVKPLKK 46 >UniRef50_A5D5A4 Regulators of stationary/sporulation gene expression n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D5A4_PELTS Length = 96 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + E++++++GQ T+PA R+ +K G D + I G + + Sbjct: 1 MFFMETRISLKGQITLPAEARKKFGIKTG-DVLKVRITEDGILVLPGKTG 49 >UniRef50_Q1RJ89 Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=Q1RJ89_RICBR Length = 87 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 K++ +GQ TIP +R L + P I + + G V + + + Sbjct: 15 KISTKGQVTIPIDIRSKLGMLPNT-EIAFVLHKDG-VLIKKENN 56 >UniRef50_B7A5B5 Transcriptional regulator, AbrB family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5B5_THEAQ Length = 82 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVF 53 +T ++ RGQ T+P VRE L L+PG D + ++ G V Sbjct: 1 MTIPLSLSRRGQITLPKEVREKLGLRPG-DVLLLKVEEGRLVL 42 >UniRef50_D2UA83 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UA83_XANAL Length = 85 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 E+ V RGQ T+P VR+AL L G + L GG++ + + D+ F Sbjct: 1 MEAIVAERGQITLPKAVRDALGLSKGT--VLKVELDGGRIILRKSVDDAISRARGRF 55 >UniRef50_C9RD59 Transcriptional regulator, AbrB family n=3 Tax=Clostridia RepID=C9RD59_AMMDK Length = 83 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPG 49 +K++ +GQ T+PA VR LKL+PG + + + Sbjct: 3 AKLSKKGQITLPAEVRRLLKLRPGA-RVRFVVEKD 36 >UniRef50_C4VR09 SpoVT / AbrB like domain protein n=10 Tax=Lactobacillus RepID=C4VR09_9LACO Length = 88 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 K++ +GQ IP +R+AL L G + +E+ +V + +L + Sbjct: 6 TGKISQKGQLVIPVAIRKALGLDKGS-KVSFEVK-NNEVIVKKLPTALD 52 >UniRef50_C3I9N4 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9N4_BACTU Length = 207 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 17/25 (68%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQ 39 + VT +GQ TIP VRE L+L+ G Sbjct: 4 AVVTSKGQITIPKEVREHLELEKGS 28 >UniRef50_C1XLQ9 Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLQ9_MEIRU Length = 91 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAF 69 V+ + + RGQ T+P +RE +K G D I++E+ + + + + + Sbjct: 7 VMIYRTTLAARGQLTLPKEIREKFGIKEG-DQINFEVTGD-TIRLKVVPRMRIEELFEQL 64 Query: 70 LR 71 Sbjct: 65 PG 66 >UniRef50_C8S823 Transcriptional regulator, AbrB family n=4 Tax=Euryarchaeota RepID=C8S823_FERPL Length = 75 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 K+T Q TIPA VR+ + LK G D + E +V + R E+ Sbjct: 4 KITRNYQITIPAEVRKKMGLKIG-DLLEVEYDKNKEVIIIRKVKEER 49 >UniRef50_Q4J7F7 Conserved protein n=4 Tax=Sulfolobus RepID=Q4J7F7_SULAC Length = 80 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ES+VT + TIPA +R+ L ++ G D + + + + GD Sbjct: 4 ESRVTRNYRITIPATIRQKLGIRVG-DKLIVYTEGDKIILVKKKGD 48 >UniRef50_C1XFP0 Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFP0_MEIRU Length = 84 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 4/77 (5%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQV--FMCRLGDEQEDHTMNAFLRFLD 74 V+ + Q T+P VR+AL +KPG D + Y + G + + D + F Sbjct: 6 VSGKYQLTLPVEVRKALGIKPG-DRVEYVVKEGRLEIWVIRPDLSKVLDEVLAEH-DFAA 63 Query: 75 ADIQNNPQKTRPFNIQQ 91 + + R + Sbjct: 64 LRAETHDDAVRYVREMR 80 >UniRef50_C9RDG3 Transcriptional regulator, AbrB family n=1 Tax=Ammonifex degensii KC4 RepID=C9RDG3_AMMDK Length = 81 Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 +++ + Q +P VR+AL + G D + +L V + + + Sbjct: 6 TARLGSKYQMVLPLSVRKALGVSAG-DELLVLLLDNAAVLLPKPKSYAD 53 >UniRef50_D1AJU6 Transcriptional regulator, AbrB family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJU6_SEBTE Length = 70 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 + +K+ RGQ IP +RE L LK G + I G + E+ Sbjct: 11 STAKLGERGQIVIPKAIREELGLKQGDNLILLGNKEEGIRIINANSLEE 59 >UniRef50_C2BDW9 Conjugative transposon regulatory protein n=4 Tax=Bacteria RepID=C2BDW9_9FIRM Length = 59 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 10 VLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPG 49 +KV +GQ TIP +RE L L+ G D + + + Sbjct: 4 TFMDTAKVMSKGQVTIPKRIRELLDLQNG-DYVTFVVNND 42 >UniRef50_C7NV75 Transcriptional regulator, AbrB family n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NV75_HALUD Length = 92 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 ++VT +GQ TIP +R+ L+ G D + +E G + + + Sbjct: 11 TTRVTRKGQVTIPKELRDEFGLEEG-DEVRWEKAEDG-IRVRKATQS 55 >UniRef50_C5A3P5 Transcription regulator, SpoVT/AbrB family n=5 Tax=Archaea RepID=C5A3P5_THEGJ Length = 78 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 +KVT Q TIPA +R+AL +K G+ + E+ V Sbjct: 4 TKVTRNYQITIPAEIRKALGIKQGE-YLTVELRGDEIVIKRAKRK 47 >UniRef50_B5ZP77 Transcriptional regulator, AbrB family n=3 Tax=Rhizobiales RepID=B5ZP77_RHILW Length = 83 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 +VT +GQ TIP +RE ++ + + I G++ + +QE RFL Sbjct: 2 RVTSKGQVTIPRDLRELAGIEANS-EVIFSIE-NGKLVLSPKNGKQEIEDRGRLDRFLQT 59 Query: 76 DIQNNPQKTRPFNIQQGKKLVAG 98 + + + + + Sbjct: 60 IRRLEGTGDQAIDAEDLMSMTRD 82 >UniRef50_B9Y5N5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N5_9FIRM Length = 174 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 ++ G+ IP +R+ KLK G DSI + + ++ + + ++ + Sbjct: 9 RLDDLGRLVIPKEIRKIYKLKEG-DSIEFFVNEDSEIVLKKFSVLSDETESITRMCQTLQ 67 Query: 76 DIQNNPQKTRPFNI 89 ++ +P + Sbjct: 68 EVTEHPVLFVEDDQ 81 >UniRef50_UPI0001C41E2A transcriptional regulator AbrB family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E2A Length = 93 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 AVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 + ++KV+ R QTTIP+ +R+ ++P D + ++ G++ + Sbjct: 18 VMTMIQTKVSARNQTTIPSKIRKKYNVQPN-DIVEWKENRNGELTVT 63 >UniRef50_Q5V1Y9 Transcription regulator n=1 Tax=Haloarcula marismortui RepID=Q5V1Y9_HALMA Length = 86 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + +KVT +GQTTIP +RE ++PG DS+ + G + + Sbjct: 1 MGETTKVTEKGQTTIPRDLREKYGIEPG-DSVEWVETEDGVMLTKAVDG 48 >UniRef50_B5YB48 Transcriptional regulator, AbrB family n=2 Tax=Dictyoglomus RepID=B5YB48_DICT6 Length = 84 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 20/46 (43%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 + ++ RGQ IP RE L LKPG I P + + + Sbjct: 8 IATLSERGQIVIPQEAREDLGLKPGDKLIVMSFGPKNTLMLVKSDS 53 >UniRef50_Q82V77 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea RepID=Q82V77_NITEU Length = 87 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHT 65 VT +GQ TIP +R+A PG + + + GG++ + + G +D Sbjct: 3 VTDKGQVTIPKRLRDAAGFLPGS-QVTFSLE-GGKIIISKTGMGTDDRR 49 >UniRef50_A5CYF9 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYF9_PELTS Length = 85 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Query: 1 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 MPA A +++T + QT+IP + + +PG D I + + G + + ++ Sbjct: 1 MPARA------QGVTRLTRKFQTSIPKKICQLKGFEPG-DRIAWILNSDGTLTLQKI--- 50 Query: 61 QEDHTMNAFLRFL 73 +D ++ ++ + Sbjct: 51 VDDKALDEYVGII 63 >UniRef50_Q5JE05 Transcription regulator, SpoVT/AbrB family n=1 Tax=Thermococcus kodakarensis RepID=Q5JE05_PYRKO Length = 81 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 KV+ +GQ +P +RE L + PG D + + G ++ + + + Sbjct: 1 MVTVKVSSKGQIVLPKSIREKLGINPG-DEVE-VLDFGDEIVIVPVKKNVD 49 >UniRef50_Q0G647 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G647_9RHIZ Length = 84 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 20 RGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 +GQ TIP P+R+ L + G +++ + G + +E Sbjct: 3 KGQVTIPKPIRDKLGIGQGS-EVNFVVNADGASLVHVDQSREE 44 >UniRef50_B1XNX3 Transcriptional regulator, AbrB family n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XNX3_SYNP2 Length = 85 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 V+ +GQ IP +R+ L +KPG + + + G+ L Q ++ L Sbjct: 3 TVTVSHKGQVVIPIEIRKQLGIKPGC-KLSFSL--DGESIRVELQHPQCQSKIDEGFGML 59 Query: 74 DADIQNNPQKTRPFNIQQGKKLVAGMD 100 P++ F+I Q + D Sbjct: 60 VCPPTT-PRRLDDFDIAQAMREQRDRD 85 >UniRef50_C8W0Q0 Transcriptional regulator, AbrB family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0Q0_DESAS Length = 90 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 V+ RGQ +PA +R+ L +K G D + + GG++ + + A L Sbjct: 3 TVTVSSRGQIVLPAEIRKNLLIKEG-DELTVRLETGGRITFSTKHKVKNKGIVAA-TAGL 60 Query: 74 DADIQ 78 +D++ Sbjct: 61 LSDME 65 >UniRef50_C5BY83 Transcriptional regulator, AbrB family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BY83_BEUC1 Length = 73 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 13 TESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMN 67 ++ V+ +GQ TIP +RE L L+ G + E G V R+ + D Sbjct: 1 MKTTVSEKGQITIPKALRERLGLRAGS-VLEVEEKDGQLVARRRVERDPVDAVYG 54 >UniRef50_B1I6W2 Transcriptional regulator, AbrB family n=2 Tax=Clostridiales RepID=B1I6W2_DESAP Length = 92 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 K+T +GQ T+P +R+ L ++ G D + + VF +D Sbjct: 5 KITAKGQITLPKSLRDKLGVREG-DYLEASLRGNELVFRHLPRKTGKD 51 >UniRef50_Q1NUD9 Transcriptional regulator AbrB n=3 Tax=Proteobacteria RepID=Q1NUD9_9DELT Length = 83 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 5/86 (5%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 T VT RGQ T V + L ++PG+ I ++LP G+ + T+ F+ Sbjct: 1 MTTLTVTARGQVTFRKDVLQHLGIRPGE-KIELDLLPDGRGVLKAARQAG---TIADFVG 56 Query: 72 FLDADIQNNPQKTRPFNIQQGKKLVA 97 L N + Sbjct: 57 LLS-GRTKKVATIEEINAATAQGWAG 81 >UniRef50_C8W1I9 Transcriptional regulator, AbrB family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1I9_DESAS Length = 87 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 +++T +GQ T+P +R+AL +K G D I +E G +V + + Sbjct: 6 IARITTKGQITVPLELRKALNVKEG-DYILFE-KKGPRVEIKK 46 >UniRef50_Q9HHH9 Vng6387h n=2 Tax=Halobacterium salinarum RepID=Q9HHH9_HALSA Length = 103 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 V+ RGQ TIP RE L + + + G+V + + + Sbjct: 12 VSSRGQATIPKEFREELGIDT-PGRVKFVRTDEGEVIVRPIQSATD 56 >UniRef50_A8UWZ5 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWZ5_9AQUI Length = 80 Score = 41.5 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 5/44 (11%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 K+T +GQ TIPA +R+ L G D + I G+V + + Sbjct: 5 KITRKGQVTIPAQIRKKL----GTDFVEITIRE-GEVVIKPVKK 43 >UniRef50_Q3J930 Transcriptional regulator, AbrB family n=2 Tax=Nitrosococcus oceani RepID=Q3J930_NITOC Length = 80 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ++ + Q IP REALKLKPGQ + V + R D Sbjct: 7 TLSSKNQVVIPRAAREALKLKPGQ-QLLVLARGDHLVMVPRPED 49 >UniRef50_C0A5P2 Transcriptional regulator, AbrB family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5P2_9BACT Length = 77 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 K+T++GQ TIP +RE ++P + +E G V + E Sbjct: 2 KLTVKGQVTIPLKLRERYGIRPN-GEVVFEAAKDG-VLIRPAEGE 44 >UniRef50_A3DFW4 Transcriptional regulator, AbrB family n=12 Tax=Firmicutes RepID=A3DFW4_CLOTH Length = 90 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 10/90 (11%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 +KV +GQ T+P +R L+L G D + + M ++ L Sbjct: 9 AKVMAKGQITLPKDIRSKLRLSTG-DRVTLICEEDRVILMNSAVYA---------MKMLQ 58 Query: 75 ADIQNNPQKTRPFNIQQGKKLVAGMDVNID 104 +++ +K N LV + I+ Sbjct: 59 KEMEGEAEKAGIRNDDDVMDLVKDVRAEIE 88 >UniRef50_Q18EN4 Transcriptional regulator n=4 Tax=Halobacteriaceae RepID=Q18EN4_HALWD Length = 90 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 E+KV+ RG TIPA +R L ++PG D + + G + + + + Sbjct: 18 ETKVSDRGMVTIPADLRRRLDIEPG-DKLRWTTDEEGHLSVEIVHQRE 64 >UniRef50_D1CA28 Transcriptional regulator, AbrB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA28_SPHTD Length = 79 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 + T KV+ + Q +PA VR+ L ++ G D + EI G + + D + L Sbjct: 1 MATRVKVSSKNQIAVPAAVRKHLGIQSG-DELLVEIRDGYVILIPEPRDY------SKRL 53 Query: 71 RFLDADIQNNPQKTRPFNIQQGKKLV 96 R L +I Q P + ++ Sbjct: 54 RGLHREIW---QDVEPQEYVRREREA 76 >UniRef50_Q18EN7 Transcription regulator n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EN7_HALWD Length = 87 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLD 74 + VT +GQ TIP+ +RE L+ G + G V + E ++ F + ++ Sbjct: 9 TTVTSKGQITIPSSIREEFGLEQGT-KLMVVPTEYGLVL-----KKVELPSVEEFQKRVE 62 Query: 75 ADIQNNPQKTRPFNIQQG 92 + + P + Q Sbjct: 63 Q--RADAIDVSPEEVSQL 78 >UniRef50_Q0G202 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G202_9RHIZ Length = 85 Score = 40.8 bits (94), Expect = 0.012, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 4/82 (4%) Query: 17 VTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDAD 76 +T RGQ T+ + L L+PGQ + + P G V + E ++AF+ L Sbjct: 6 ITARGQLTLRREILRHLGLEPGQ-KVEASLRPDGAVELKAAPREGS---IHAFIGSLKDQ 61 Query: 77 IQNNPQKTRPFNIQQGKKLVAG 98 + N Sbjct: 62 TKGRRLSVEEMNEVIADGAADN 83 >UniRef50_A2BMA4 Acetolactate synthase, small (Regulatory) subunit n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMA4_HYPBU Length = 137 Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 11/87 (12%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 KV +G+ TIP VREAL + G + I ++ + L L L Sbjct: 8 KVDSKGRVTIPLVVREALNVIEGMNLILIADTDRREIILTPL------PGGGENLYELRI 61 Query: 76 DIQNNPQKTRPFNIQQGKKLVAGMDVN 102 + ++ P + +A +DV+ Sbjct: 62 EFKDVPGAL-----ARISSKLAELDVD 83 >UniRef50_A4WHX8 Transcriptional regulator, AbrB family n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=A4WHX8_PYRAR Length = 80 Score = 40.8 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 KVT Q IPA VR+A+ +K G + G + + ++ +E L + A Sbjct: 7 KVTRNYQMVIPASVRKAVGIKEGDLVKVWYDESEGVIKIRKVDPLEEIEAELRELPKIKA 66 Query: 76 D 76 D Sbjct: 67 D 67 >UniRef50_C5A2F5 Transcription regulator, SpoVT/AbrB family n=4 Tax=Archaea RepID=C5A2F5_THEGJ Length = 74 Score = 40.0 bits (92), Expect = 0.021, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 15 SKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFL 70 +KVT Q TIP+ VR+ L + G D + E+ G++ + + E L Sbjct: 4 TKVTRNYQITIPSEVRKKLGINVG-DVLIVEVE-NGKIVLKKSDLELPMLPGGKGL 57 >UniRef50_Q5V7R4 Transcriptional regulator n=1 Tax=Haloarcula marismortui RepID=Q5V7R4_HALMA Length = 82 Score = 40.0 bits (92), Expect = 0.021, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 7 SHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 SH V E+ V T+PA VR ++ G D I + + G++ + Sbjct: 2 SHEV-EDETTVNESYSVTVPAAVRREAGVEAG-DKIRWHVDDDGKLSIK 48 >UniRef50_C5A3X5 Transcription regulator, SpoVT/AbrB family n=3 Tax=Thermococcus RepID=C5A3X5_THEGJ Length = 81 Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE---QEDHTMNAFLRF 72 KV+ +GQ IP +R+AL ++ G + + G + M +L E +E + L Sbjct: 8 KVSTKGQVVIPKEIRDALGIRNGDYLV--VMEKNGYIVMKKLSVEDVFKEGEELAKTLEI 65 Query: 73 LDADIQNNPQKTRPFN 88 D+ R + Sbjct: 66 TREDVIRAVGDVRYED 81 >UniRef50_B7R295 Transcription regulator, SpoVT/AbrB family n=2 Tax=Archaea RepID=B7R295_9EURY Length = 83 Score = 39.6 bits (91), Expect = 0.027, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 T +V+ +GQ +P +RE +K G D + + G ++ + + + E Sbjct: 1 MTTVRVSSKGQIVLPKAIREKFGIKEG-DELE-VLDFGNEIVIVPVKKDIE 49 >UniRef50_B9MR03 Transcriptional regulator, AbrB family n=7 Tax=Firmicutes RepID=B9MR03_ANATD Length = 183 Score = 39.6 bits (91), Expect = 0.028, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 4/96 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 ++ G+ IP +R LK++ G D + G+V + + E Sbjct: 9 RIDDLGRVVIPKEIRRTLKIREG-DPLEIYTDNEGEVILRKYSPIGEMGAFAKEYAETLH 67 Query: 76 DIQNNPQKTRPFNIQQGKKLVAGMDVN-IDDEIGDD 110 + + + + + + +D + + Sbjct: 68 QVSGHIIIIT--DRDRVIAVAGASKKDYMDKPLSQE 101 >UniRef50_C0GWI2 Transcriptional regulator, AbrB family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWI2_9DELT Length = 92 Score = 39.6 bits (91), Expect = 0.028, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRL 57 ++ K+ RGQ IP + ++L + PG D I ++ G + R Sbjct: 1 MSATMKINARGQIKIPKNIMQSLNIGPG-DYIEIDLESGKAIMKPRK 46 >UniRef50_C5A4A3 Transcription regulator, SpoVT/AbrB family n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A4A3_THEGJ Length = 88 Score = 39.6 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMC 55 +KV +G+ IP VR L +KPG++ + EI V Sbjct: 7 ITKVDSKGRVVIPKDVRRRLNIKPGEEFLVTEIDGDTIVLRR 48 >UniRef50_A2BJE0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJE0_HYPBU Length = 87 Score = 39.6 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 T +V +G+ T+P VR L L+ + I + + + + AF Sbjct: 6 ATIVRVDGKGRVTLPLEVRRRLGLREWS-KLRLFIDEESKRIILEVEAGVAERFYGAFPA 64 Query: 72 F 72 Sbjct: 65 K 65 >UniRef50_A8UXK3 Transcriptional regulator, AbrB family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXK3_9AQUI Length = 79 Score = 39.6 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 11 LTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 + T K++ RG+ TIP +R+ L LK G D + +V + ++ + Sbjct: 1 MKTVVKISPRGRITIPKELRDRLGLKAG-DYLLIRTEGD-KVKLRKIEPIE 49 >UniRef50_A1RYS9 Transcriptional regulator, AbrB family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYS9_THEPD Length = 81 Score = 39.6 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDA 75 +VT R + TIP VR L +K G D + + G ++ + + +E + + L LD Sbjct: 8 RVTERYRVTIPLSVRRELGIKVG-DKLRVRVE-GKRIILEPIPEEPRNP-LEDMLSILDK 64 Query: 76 DIQNNPQKT 84 + + + Sbjct: 65 PVDVDAVRL 73 >UniRef50_Q745X1 Putative uncharacterized protein n=1 Tax=Thermus thermophilus HB27 RepID=Q745X1_THET2 Length = 101 Score = 39.2 bits (90), Expect = 0.043, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 +T + +G+ +P P+R+AL L PG + ++ G++ + +E+ Sbjct: 24 STTLTLDAQGRVLLPRPLRQALGLGPGARLVA--LVEDGRLVLTPWERLEEE 73 >UniRef50_Q5JHP9 Transcription regulator, SpoVT/AbrB family n=2 Tax=Thermococcaceae RepID=Q5JHP9_PYRKO Length = 74 Score = 38.9 bits (89), Expect = 0.046, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFL 73 +KVT Q TIP+ +R+ L +K G D + EI G V + E + Sbjct: 3 ITKVTRNYQITIPSDIRKKLGIKVG-DVLVIEIEDGKAVI---KKSDLELPLLPGGKGLK 58 Query: 74 DADIQNNPQKTRPFNI 89 DI+ +K + + Sbjct: 59 IEDIEEAIRKGQGEDE 74 >UniRef50_A7IIG0 SpoVT/AbrB domain protein n=5 Tax=Bacteria RepID=A7IIG0_XANP2 Length = 76 Score = 38.5 bits (88), Expect = 0.059, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 ++T +GQ TIPA +R L P + + G V R Sbjct: 2 RITSKGQVTIPADIRAKAGLLPDT-EVEFHF--DGTVVTLRAAQ 42 >UniRef50_B8GLG0 Transcriptional regulator, AbrB family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLG0_THISH Length = 68 Score = 38.5 bits (88), Expect = 0.060, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 5/73 (6%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLR 71 T V+ + Q +P +R+A+ ++PGQ + + G + + M FLR Sbjct: 1 MTTVTVSKKYQIVMPREMRQAMGIRPGQ-KLQVVLYEGRAELIPVRDITE----MRGFLR 55 Query: 72 FLDADIQNNPQKT 84 ++ D+ + + Sbjct: 56 GIETDVPRDGDRV 68 >UniRef50_D2PVW4 Transcriptional regulator, AbrB family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PVW4_9ACTO Length = 75 Score = 38.5 bits (88), Expect = 0.061, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQ 61 K+ +GQ TIPA +R L G D + + GG + + R D + Sbjct: 2 KLNSKGQVTIPAALRHKHHLHEG-DEVE-VVEDGGTLRIVRAPDSE 45 >UniRef50_C7RQB4 Transcriptional regulator, AbrB family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQB4_9PROT Length = 86 Score = 38.5 bits (88), Expect = 0.064, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 12 TTESKVTIRGQTTIPAPVREALKLKPG 38 +++ +GQ IP VR+ L L+ G Sbjct: 1 MATVRLSSKGQIVIPKAVRDQLHLQAG 27 >UniRef50_UPI00019018D3 hypothetical protein MtubCP_16121 n=1 Tax=Mycobacterium tuberculosis CPHL_A RepID=UPI00019018D3 Length = 74 Score = 38.5 bits (88), Expect = 0.067, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 24 TIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 T+P VR+AL L+ G D + + + V Sbjct: 2 TVPKAVRDALGLQSG-DRVVFRVEGNRPVLARTPD 35 >UniRef50_B1I1Z2 Transcriptional regulator, AbrB family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1Z2_DESAP Length = 81 Score = 38.5 bits (88), Expect = 0.069, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 ++ +GQ +IP +R LK G D + E G + + Sbjct: 5 TISEKGQISIPVSLRRRYGLKKG-DRLAVE-EADGAIVLRP 43 >UniRef50_Q1NKK4 Transcriptional regulator AbrB n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKK4_9DELT Length = 78 Score = 38.5 bits (88), Expect = 0.069, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 14 ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE 60 + T++GQ TIP+ +R+ L ++ G I G++ M L D+ Sbjct: 3 TTTTTVKGQVTIPSRLRKKLHIRQGT-RIAVH-ERDGKIIMEPLPDD 47 >UniRef50_C2HAZ6 Addiction module antidote n=12 Tax=Enterococcus faecium RepID=C2HAZ6_ENTFC Length = 78 Score = 38.5 bits (88), Expect = 0.075, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 23 TTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQE 62 TTIP V+E + ++ G D+I Y G V M + +E + Sbjct: 18 TTIPPEVKEFMGVQTG-DAISYVFQSDGSVRMIKAQEEPD 56 >UniRef50_UPI00001B566A hypothetical protein PHS014.3n n=1 Tax=Pyrococcus horikoshii OT3 RepID=UPI00001B566A Length = 78 Score = 38.1 bits (87), Expect = 0.081, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGD 59 K++ +GQ IPA +R+ LKL G D + E+ + + + Sbjct: 5 KLSSKGQIVIPAKIRKKLKLSKG-DKLLLEMKGD-AIILRPVVK 46 >UniRef50_A2BJP3 Predicted transcriptional regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJP3_HYPBU Length = 74 Score = 38.1 bits (87), Expect = 0.085, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLG 58 KV +GQ T+P R+ L ++ D + + G++ + + Sbjct: 6 KVGRKGQITLPKEARDMLAIREN-DYLVLRVE-DGRIVIEKPE 46 >UniRef50_P37554 Stage V sporulation protein T n=62 Tax=Bacteria RepID=SP5T_BACSU Length = 178 Score = 38.1 bits (87), Expect = 0.089, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCR 56 ++ G+ IP +R L+++ G D + + G+V + + Sbjct: 9 RIDDLGRVVIPKEIRRTLRIREG-DPLEIFVDRDGEVILKK 48 >UniRef50_D2PHG8 Transcriptional regulator, AbrB family n=4 Tax=Sulfolobus islandicus RepID=D2PHG8_SULIS Length = 76 Score = 38.1 bits (87), Expect = 0.099, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 16 KVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQED 63 V RG+ IP +R+ L LK G + I G++ + +D Sbjct: 6 TVDERGRIVIPKEIRDKLNLKEGS-KVEINIE-NGRIIINVKKITIDD 51 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.304 0.137 0.363 Lambda K H 0.267 0.0423 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 610,674,171 Number of Sequences: 3077464 Number of extensions: 20969725 Number of successful extensions: 57682 Number of sequences better than 1.0e-01: 196 Number of HSP's better than 0.1 without gapping: 150 Number of HSP's successfully gapped in prelim test: 162 Number of HSP's that attempted gapping in prelim test: 57426 Number of HSP's gapped (non-prelim): 313 length of query: 111 length of database: 1,040,396,356 effective HSP length: 79 effective length of query: 32 effective length of database: 797,276,700 effective search space: 25512854400 effective search space used: 25512854400 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 87 (38.1 bits)