41 c2varB_ Probab=99.73   E-value=2.7e-16  Score=118.25  Aligned_columns=224  Identities=17%

Q ss_pred             CHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCE----------------
Q ss_conf             7313675589999769856676578851079997224877898999999999984288347888----------------
Q batch____        15 GHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDA----------------   78 (287)
Q Consensus        15 G~~G~~a~~~~l~~~G~~v~~i~Tv~~s~~tg~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~da----------------   78 (287)
                      ||.|.+.+. +++++|.++..+..+            |.+...+.+...++...-.......+.                
T Consensus        32 GG~~~N~a~-~l~~lg~~~~~i~~v------------G~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~i~~~~~~~   98 (311)
T c2varB_          32 AGSELNFCI-AVVRNHLSCSLIARV------------GNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIP   98 (311)
T ss_dssp             ECHHHHHHH-HHHHTTCCEEEEEEE------------ESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSST
T ss_pred             CCHHHHHHH-HHHHCCCCEEEEEEE------------CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf             856899999-999679946999982------------6998899999999871996237997179753299999337778


Q ss_pred             ---------------------------------EEEECCC--CHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCC
Q ss_conf             ---------------------------------9993238--98999999999998642189826997210122788614
Q batch____        79 ---------------------------------VLSGYLG--SAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCI  123 (287)
Q Consensus        79 ---------------------------------i~~G~l~--s~~~~~~v~~~i~~~~~~~~~~~~v~DPvl~d~~~~~~  123 (287)
                                                       ...|+.+  +....+.+....+..+..  .+...+||.       ..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~  169 (311)
T c2varB_          99 MKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR--SLDTNIRPK-------LW  169 (311)
T ss_dssp             TCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE--EEECCCCGG-------GS
T ss_pred             CCEEEEEECCCCCCCCCCHHHCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC--CCEEEECCC-------CC
T ss_conf             750499952765300089778298884699899996923446720599999998715023--845877630-------30


Q ss_pred             CCHHHHHHHHHHHHHHCC--EEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEC
Q ss_conf             670589999996322076--995698999997199888988999978889974496899930246756677604999808
Q batch____       124 VAPGVAEFHVRHGLPASD--IIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTA  201 (287)
Q Consensus       124 ~~~~~~~~~~~~Ll~~~d--ii~pN~~Ea~~l~g~~~~~~~~~~~~a~~l~~~g~~~Vivt~g~~g~~~~~~~~~~~~~~  201 (287)
                      ............++++.|  .+.+|..|+..+.+.     .+..++++.+.+++++.|++|.|..|+          +.-
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~l~~~~~~~vivt~G~~G~----------~~~  234 (311)
T c2varB_         170 SSLEKAKETILSILKKYDIEVLITDPDDTKILLDV-----TDPDEAYRKYKELGVKVLLYKLGSKGA----------IAY  234 (311)
T ss_dssp             SCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSC-----CCHHHHHHHHHHTTEEEEEEECGGGCE----------EEE
T ss_pred             CCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCC-----CCHHHHHHHHHHCCCCEEEEEECCCEE----------EEE
T ss_conf             54011268899888636943531698899853269-----998999999985079779996479607----------999


Q ss_pred             CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             9628999611552333345526789999999998799989999999999999999877528056656753788847
Q batch____       202 DEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK  277 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~dt~GaGD~fsa~~~a~l~~G~~l~~Av~~A~a~~~~~l~~t~~~~~~el~~i~~~~~~~~  277 (287)
                      .+...+..+.++.+++|++||||+|.|+|+++|++|+++++|+++|+++  .++..+.......+|..+....+.+
T Consensus       235 ~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~g~~~~~a~~~a~a~--Aa~~~~~~G~~~~~p~~~ev~~~l~  308 (311)
T c2varB_         235 KDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAA--STLVITVRGDNELTPTLEDAERFLN  308 (311)
T ss_dssp             ETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH--HHHHTTSSSSSTTCCCHHHHHHHHH
T ss_pred             ECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf             8997899625434752687724789999999998799989999999999--7887410388888989899999888