34 c3in1A_ Probab=99.78   E-value=1e-17  Score=126.92  Aligned_columns=236  Identities=17%

Q ss_pred             CHHHHHHHHHHHHHCCCEEEEEEEE-----------------------------------EEECCCCCCCEEEEECCHHH
Q ss_conf             7313675589999769856676578-----------------------------------85107999722487789899
Q batch____        15 GHAGNSAAEFPMRRLGANVWPLNTV-----------------------------------QFSNHTQYGKWTGCVMPPSH   59 (287)
Q Consensus        15 G~~G~~a~~~~l~~~G~~v~~i~Tv-----------------------------------~~s~~tg~~~~~~~~~~~~~   59 (287)
                      ||.|.+.+. .++++|++|..+..+                                   .+..+.+.............
T Consensus        39 GG~~~Nva~-~la~lG~~v~~i~~iG~d~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  117 (312)
T c3in1A_          39 GGDAINEAT-IISRLGHRTALXSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLW  117 (312)
T ss_dssp             ESHHHHHHH-HHHHTTCCEEEEEEEESSHHHHHHHHHHHHHTCBCTTEEEETTSCCCEEEEEEETTSCEEEECCTTSHHH
T ss_pred             CCHHHHHHH-HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
T ss_conf             857999999-9997799339998605997899999987741478615896088762269999879963799833776543


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999842883478889993238989999999999986421898269972101227886146705899999963220
Q batch____        60 LTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPA  139 (287)
Q Consensus        60 ~~~~l~~~~~~~~~~~~dai~~G~l~s~~~~~~v~~~i~~~~~~~~~~~~v~DPvl~d~~~~~~~~~~~~~~~~~~Ll~~  139 (287)
                      ......--.........-.+..+.+...-..+...++++..+..  +.++++|+.-.        ...........++++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~--------~~~~~~~~~~~~l~~  187 (312)
T c3in1A_         118 KLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKAR--QXIICADXIKP--------RLNETLDDICEALSY  187 (312)
T ss_dssp             HCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHTT--TCEEEEEECCC--------SSSCCGGGGHHHHTT
T ss_pred             CCCHHHHCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCCC--------CHHHHHHHHHHHHHC
T ss_conf             25966403211046988999702346788999999999998873--98899408763--------213555668987401


Q ss_pred             CCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCC
Q ss_conf             76995698999997199888988999978889974496899930246756677604999808962899961155233334
Q batch____       140 SDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP  219 (287)
Q Consensus       140 ~dii~pN~~Ea~~l~g~~~~~~~~~~~~a~~l~~~g~~~Vivt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dt  219 (287)
                      +|++.+|..|+..+.+.     .+..++++.+.+.+++.|++|.|++|+         ++..++...+..+.++..++|+
T Consensus       188 ~d~~~~~~~e~~~~~~~-----~~~~~~~~~l~~~~~~~vivt~G~~G~---------~~~~~~~~~~~~~~~~~~vvdt  253 (312)
T c3in1A_         188 VDYLFPNFAEAKLLTGK-----ETLDEIADCFLACGVKTVVIKTGKDGC---------FIKRGDXTXKVPAVAGITAIDT  253 (312)
T ss_dssp             CSEEECBHHHHHHHHCC-----CSHHHHHHHHHHTTCSEEEEECGGGCE---------EEEETTEEEEECCCSSCCCSCC
T ss_pred             CCEEEECHHHHHHHCCC-----CCHHHHHHHHHHHCCCEEEEEECCCEE---------EEEECCEEEEECCCCCCCCCCC
T ss_conf             99998665775530478-----878999999998389889983469605---------9997784552146675200257


Q ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             5526789999999998799989999999999999999877528056656753788847
Q batch____       220 VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK  277 (287)
Q Consensus       220 ~GaGD~fsa~~~a~l~~G~~l~~Av~~A~a~~~~~l~~t~~~~~~el~~i~~~~~~~~  277 (287)
                      +||||+|.|+|++++++|+++++|+++|+++  .++..++......+|..+....+..
T Consensus       254 tGAGD~f~ag~~~~l~~g~~~~~al~~a~~~--aa~~v~~~G~~~~~p~~~ev~~~l~  309 (312)
T c3in1A_         254 IGAGDNFASGFIAALLEGKNLRECARFANAT--AAISVLSVGATTGVKNRKLVEQLLE  309 (312)
T ss_dssp             TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH--HHHHHTSSSSSSSCSSSHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf             7702688999999998799989999999999--8998410478888989899999887


