12 c1ynpA_ Probab=100.00  E-value=0  Score=405.18  Aligned_columns=280  Identities=35%

Q ss_pred             CCCCCCCCCCCEECHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHHHCCCC
Q ss_conf             97104868886525114302535885566776778989999999999986998899743108870089999999863985
Q batch____         1 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARR   80 (324)
Q Consensus         1 M~yr~lG~tgl~vs~lg~Gt~~~g~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~iDTA~~Yg~g~sE~~lG~aL~~~~~r   80 (324)
                      |+||+||+||++||+||||||++|          .+++++.++|+.|+++|||+||||++||+|.||+.+|+||++.  +
T Consensus         2 M~~r~lG~tg~~vs~lglGt~~~g----------~~~~~~~~~l~~A~~~Gin~fDTA~~Yg~g~sE~~lG~~l~~~--~   69 (283)
T c1ynpA_           2 MKKRQLGTSDLHVSELGFGCMSLG----------TDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGR--R   69 (283)
T ss_dssp             CCEEECTTSSCEEESBCBCSCCCC----------SCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTC--G
T ss_pred             CCCCCCCCCCCEECCEEEEECCCC----------CCHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHHHC--C
T ss_conf             753347699865340207208898----------7889999999999986998899710318984489999998404--8


Q ss_pred             CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             63899962025577876799989999999999985164766400230678888868999999999975786587056889
Q batch____        81 EDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH  160 (324)
Q Consensus        81 ~~i~i~tK~g~~~~~~~~~~s~~~i~~~~e~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~l~~L~~~G~ir~iGis~~~  160 (324)
                      ..+++.+|.           +++.+++++++||++|++||+|++++|+|+...+.++.++++++|+++|+||+||+|+|+
T Consensus        70 ~~~~~~~~~-----------~~~~i~~~~e~sl~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~g~i~~iG~s~~~  138 (283)
T c1ynpA_          70 QDIILATKV-----------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIR  138 (283)
T ss_dssp             GGCEEEEEC-----------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCC
T ss_pred             CEEEECCCC-----------CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCC
T ss_conf             769972675-----------379999999999997089843202100688788968899999999984304713147788


Q ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCHHHCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999985640798558970037941352258999999960691676043345433577777765554431001223
Q batch____       161 ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY  240 (324)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~~i~~~~~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~  240 (324)
                      +..+.+.....      .++++|++||++++..+..+ +.|+++++++++++++++|.|+++..............    
T Consensus       139 ~~~~~~~~~~~------~~~~~q~~~n~~~~~~~~~l-~~~~~~g~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~----  207 (283)
T c1ynpA_         139 PNVIKEYLKRS------NIVSIMMQYSILDRRPEEWF-PLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYD----  207 (283)
T ss_dssp             HHHHHHHHHHS------CCCEEEEECBTTBCGGGGGH-HHHHHTTCEEEEECTTGGGTTSSSCCCTTCCBTTBCHH----
T ss_pred             HHHHHHHCCCC------CCEEEEEEECCCCCCCHHHH-HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH----
T ss_conf             89999831335------71288871036756747889-99998498279800023531247867675443210101----


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCC-CCCHHHHHHHHHHHCCCC
Q ss_conf             4587668888999999998809998999999999589953997279999999998986189-988899999997500388
Q batch____       241 KESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDI-TLKPEQIAELETPYKPHP  319 (324)
Q Consensus       241 ~~~~~~~~~~~~~l~~la~~~~~s~~q~al~~~l~~~~v~~vl~G~~~~~~l~enl~~~~~-~L~~e~~~~id~~~~~~~  319 (324)
                                ...+..+|.++++|++|+||+|++++|.|++||+|+++++|++||+++++. +|+++++++|++++++..
T Consensus       208 ----------~~~~~~~a~~~~~s~~q~al~~~l~~~~v~~vi~G~~~~~~l~enl~a~~~~~Lt~ee~~~i~~~~~~~~  277 (283)
T c1ynpA_         208 ----------ELKLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAV  277 (283)
T ss_dssp             ----------HHHHHHHHSCSSSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCCC
T ss_pred             ----------HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             ----------3899999987099989999999984899409961799999999989861988889899999996411024


Q ss_pred             CCCCC
Q ss_conf             89889
Q batch____       320 VVGFK  324 (324)
Q Consensus       320 ~~~~~  324 (324)
                      ..+.+
T Consensus       278 ~~~~~  282 (283)
T c1ynpA_         278 YEQHR  282 (283)
T ss_dssp             CCSSC
T ss_pred             CCCCC
T ss_conf             67568