Phyre 2 alignment of P77489 with d1jqka_

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Job Description | P77489
Confidence | 20.24% | Date | Thu Jan 5 12:29:50 GMT 2012
Rank | 89 | Aligned Residues | 35
% Identity | 26% | Template | d1jqka_
SCOP info | Prismane protein-like | Prismane protein-like | Carbon monoxide dehydrogenase
Resolution | 2.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 685 | . | . | . | . |  |  |  |  |  |  |  | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | K | A | K | G | . | . | . | . | . | . | . | V | G | E | L | G | L | C | G | V | S | A | A | I | A | N | A | V | Y | N | A | T | G | I | R | V | R | D | Y | P | I
Query Conservation |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | G | L | G | G | P | L | P | L | V | M | H | M | G | S | C | V | D | N | S | R | A | V | A | L | A | T | A | L | A | N | K | L | G | V | D | L | S | D | L | P | L
Template Known Secondary structure |  | T | T | S | S | S |  |  |  | S |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | T | T | T | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 516 | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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