Phyre 2 alignment of P77489 with d1d7ka2

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Job Description | P77489
Confidence | 29.39% | Date | Thu Jan 5 12:29:50 GMT 2012
Rank | 69 | Aligned Residues | 41
% Identity | 15% | Template | d1d7ka2
SCOP info | TIM beta/alpha-barrel | PLP-binding barrel | Alanine racemase-like, N-terminal domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 203 | . | . | . | . | . | . | 210 | . | . |  |  | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |  |  |  |  | . | . | . | . | . | . | . | . | . | 240 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | L | T | L | W | T | S | N | Q | M | . | . | I | D | W | C | R | T | D | L | A | K | T | L | K | V | P | V | E | N | . | . | . | . | V | R | I | I | S | P | Y | I | G | G | G | F | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | V | S | F | H | V | G | S | G | C | T | D | P | E | T | F | V | Q | A | I | S | D | A | R | C | V | F | D | M | G | A | E | V | G | F | S | M | Y | L | L | D | I | G | G | G | F | P
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  | S |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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