Phyre 2 Results for P77489

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Email | l.a.kelley@imperial.ac.uk
Description | P77489
Date | Thu Jan 5 12:29:50 GMT 2012
Unique Job ID | 18f1a0230431dc24

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c1ffvB_
Top template information
PDB header:hydrolase Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava
Confidence and coverage
Confidence: | 100.0% | Coverage: | 98%
716 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | K | F | D | K | P | A | G | E | N | P | I | D | Q | L | K | V | V | G | R | P | H | D | R | I | D | G | P | L | K | T | T | G | T | A | R | Y | A | Y | E | W | H | E | E | A | P | N | A | A | Y | G | Y | I | V | G | S | A | I | A | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | G | R | L | T | A | L | D | T | D | A | A | Q | K | A | P | G | V | L | A | V | I | T | A | S | N | A | G | A | L | G | K | G | D | K | N | T | A | R | L | L | G | G | P | T | I | E | H | Y | H | Q | A | I | A | L | V | V | A | E | T | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | E | Q | A | R | A | A | A | S | L | V | Q | A | H | Y | R | R | N | K | G | A | Y | S | L | A | D | E | K | Q | A | V | N | Q | P | P | E | D | T | P | D | K | N | V | G | D | F | D | G | A | F | T | S | A | A | V | K | I | D | A | T | Y
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | T | T | P | D | Q | S | H | M | A | M | E | P | H | A | S | M | A | V | W | D | G | N | K | L | T | L | W | T | S | N | Q | M | I | D | W | C | R | T | D | L | A | K | T | L | K | V | P | V | E | N | V | R | I | I | S | P | Y | I | G | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | G | F | G | G | K | L | F | L | R | S | D | A | L | L | A | A | L | A | A | R | A | V | K | R | P | V | K | V | M | L | P | R | P | S | I | P | N | N | T | T | H | R | P | A | T | L | Q | H | L | R | I | G | A | D | Q | S | G | K | I | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | A | I | S | H | E | S | W | S | G | N | L | P | G | G | T | P | E | T | A | V | Q | Q | S | E | L | L | Y | A | G | A | N | R | H | T | G | L | R | L | A | T | L | D | L | P | E | G | N | A | M | R | A | P | G | E | A | P | G | L | M | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | L | E | I | A | I | D | E | L | A | E | K | A | G | I | D | P | V | E | F | R | I | L | N | D | T | Q | V | D | P | A | D | P | T | R | C | F | S | R | R | Q | L | I | E | C | L | R | T | G | A | D | K | F | G | W | K | Q | R | N | A | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | P | G | Q | V | R | D | G | E | W | L | V | G | H | G | V | A | A | G | F | R | N | N | L | L | E | K | S | G | A | R | V | H | L | E | Q | N | G | T | V | T | V | E | T | D | M | T | D | I | G | T | G | S | Y | T | I | L | A | Q | T | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | A | E | M | L | G | V | P | L | E | Q | V | A | V | H | L | G | D | S | S | F | P | V | S | A | G | S | G | G | Q | W | G | A | N | T | S | T | S | G | V | Y | A | A | C | M | K | L | R | E | M | I | A | S | A | V | G | F | D | P | E | Q
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | S | Q | F | A | D | G | K | I | T | N | G | T | R | S | A | T | L | H | E | A | T | A | G | G | R | L | T | A | E | E | S | I | E | F | G | T | L | S | K | E | Y | Q | Q | S | T | F | A | G | H | F | V | E | V | G | V | H | S | A | T | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | E | V | R | V | R | R | M | L | A | V | C | A | A | G | R | I | L | N | P | K | T | A | R | S | Q | V | I | G | A | M | T | M | G | M | G | A | A | L | M | E | E | L | A | V | D | D | R | L | G | Y | F | V | N | H | D | M | A | G | Y | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720
Sequence |  | V | P | V | H | A | D | I | P | K | Q | E | V | I | F | L | D | D | T | D | P | I | S | S | P | M | K | A | K | G | V | G | E | L | G | L | C | G | V | S | A | A | I | A | N | A | V | Y | N | A | T | G | I | R | V | R | D | Y | P | I | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 730 | . | .
Sequence |  | L | D | K | L | L | D | K | L | P | D | V | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1ffvB_ |

### PDB 1ffv chain B

Region: 11 - 730
Aligned: 716
Modelled: 720
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase
Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava

Phyre2
2 |
| c1sb3D_ |

### PDB 1sb3 chain D

Region: 17 - 730
Aligned: 703
Modelled: 714
Confidence: 100.0%
Identity: 28%
PDB header:oxidoreductase
Chain: D: PDB Molecule:4-hydroxybenzoyl-coa reductase alpha subunit;
PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica

Phyre2
3 |
| c2w54F_ |

### PDB 2w54 chain F

Region: 17 - 730
Aligned: 711
Modelled: 714
Confidence: 100.0%
Identity: 25%
PDB header:oxidoreductase
Chain: F: PDB Molecule:xanthine dehydrogenase;
PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde

Phyre2
4 |
| c1n62E_ |

### PDB 1n62 chain E

Region: 13 - 730
Aligned: 714
Modelled: 718
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: E: PDB Molecule:carbon monoxide dehydrogenase large chain;
PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state

Phyre2
5 |
| c1t3qB_ |

### PDB 1t3q chain B

Region: 14 - 730
Aligned: 713
Modelled: 717
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: B: PDB Molecule:quinoline 2-oxidoreductase large subunit;
PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86

Phyre2
6 |
| c1wygA_ |

### PDB 1wyg chain A

Region: 3 - 730
Aligned: 707
Modelled: 713
Confidence: 100.0%
Identity: 24%
PDB header:oxidoreductase
Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s)

Phyre2
7 |
| c3eubL_ |

### PDB 3eub chain L

Region: 17 - 732
Aligned: 706
Modelled: 715
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: L: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine

Phyre2
8 |
| c1vlbA_ |

### PDB 1vlb chain A

Region: 4 - 729
Aligned: 708
Modelled: 726
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a

Phyre2
9 |
| c1dgjA_ |

### PDB 1dgj chain A

Region: 8 - 729
Aligned: 700
Modelled: 709
Confidence: 100.0%
Identity: 25%
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774

Phyre2
10 |
| d1jrob2 |

### PDB 1jro chain B domain 2

Region: 138 - 730
Aligned: 592
Modelled: 593
Confidence: 100.0%
Identity: 24%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
11 |
| d1rm6a2 |

### PDB 1rm6 chain A domain 2

Region: 141 - 730
Aligned: 581
Modelled: 590
Confidence: 100.0%
Identity: 28%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
12 |
| d1n62b2 |

### PDB 1n62 chain B domain 2

Region: 141 - 730
Aligned: 588
Modelled: 590
Confidence: 100.0%
Identity: 21%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
13 |
| d1ffvb2 |

### PDB 1ffv chain B domain 2

Region: 134 - 730
Aligned: 595
Modelled: 597
Confidence: 100.0%
Identity: 22%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
14 |
| d1t3qb2 |

### PDB 1t3q chain B domain 2

Region: 160 - 730
Aligned: 569
Modelled: 571
Confidence: 100.0%
Identity: 24%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
15 |
| d1v97a5 |

### PDB 1v97 chain A domain 5

Region: 140 - 730
Aligned: 583
Modelled: 590
Confidence: 100.0%
Identity: 23%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
16 |
| d1vlba4 |

### PDB 1vlb chain A domain 4

Region: 142 - 729
Aligned: 570
Modelled: 588
Confidence: 100.0%
Identity: 26%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
17 |
| d1dgja4 |

### PDB 1dgj chain A domain 4

Region: 141 - 729
Aligned: 569
Modelled: 578
Confidence: 100.0%
Identity: 25%
Fold: Molybdenum cofactor-binding domain
Superfamily: Molybdenum cofactor-binding domain
Family: Molybdenum cofactor-binding domain

Phyre2
18 |
| c3hrdE_ |

### PDB 3hrd chain E

Region: 12 - 414
Aligned: 400
Modelled: 403
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin
PDBTitle: crystal structure of nicotinate dehydrogenase

Phyre2
19 |
| c3hrdF_ |

### PDB 3hrd chain F

Region: 429 - 730
Aligned: 301
Modelled: 302
Confidence: 100.0%
Identity: 29%
PDB header:oxidoreductase
Chain: F: PDB Molecule:nicotinate dehydrogenase medium molybdopterin
PDBTitle: crystal structure of nicotinate dehydrogenase

Phyre2
20 |
| d1t3qb1 |

### PDB 1t3q chain B domain 1

Region: 16 - 162
Aligned: 144
Modelled: 147
Confidence: 100.0%
Identity: 24%
Fold: alpha/beta-Hammerhead
Superfamily: CO dehydrogenase molybdoprotein N-domain-like
Family: CO dehydrogenase molybdoprotein N-domain-like

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1ffvB_ |
|  | 100.0 | 22 | PDB header:hydrolase Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava
2 | c1sb3D_ |
|  | 100.0 | 28 | PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxybenzoyl-coa reductase alpha subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica
3 | c2w54F_ |
|  | 100.0 | 25 | PDB header:oxidoreductase Chain: F: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde
4 | c1n62E_ |
|  | 100.0 | 22 | PDB header:oxidoreductase Chain: E: PDB Molecule:carbon monoxide dehydrogenase large chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state
5 | c1t3qB_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: B: PDB Molecule:quinoline 2-oxidoreductase large subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86
6 | c1wygA_ |
|  | 100.0 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s)
7 | c3eubL_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: L: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine
8 | c1vlbA_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a
9 | c1dgjA_ |
|  | 100.0 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774
10 | d1jrob2 |
|  | 100.0 | 24 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
11 | d1rm6a2 |
|  | 100.0 | 28 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
12 | d1n62b2 |
|  | 100.0 | 21 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
13 | d1ffvb2 |
|  | 100.0 | 22 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
14 | d1t3qb2 |
|  | 100.0 | 24 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
15 | d1v97a5 |
|  | 100.0 | 23 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
16 | d1vlba4 |
|  | 100.0 | 26 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
17 | d1dgja4 |
|  | 100.0 | 25 | Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain
18 | c3hrdE_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin PDBTitle: crystal structure of nicotinate dehydrogenase
19 | c3hrdF_ |
|  | 100.0 | 29 | PDB header:oxidoreductase Chain: F: PDB Molecule:nicotinate dehydrogenase medium molybdopterin PDBTitle: crystal structure of nicotinate dehydrogenase
20 | d1t3qb1 |
|  | 100.0 | 24 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
21 | d1n62b1 |
| not modelled | 100.0 | 26 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
22 | d1v97a3 |
| not modelled | 100.0 | 24 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
23 | d1ffvb1 |
| not modelled | 100.0 | 25 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
24 | d3b9jc1 |
| not modelled | 100.0 | 26 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
25 | d1rm6a1 |
| not modelled | 100.0 | 29 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
26 | d1jrob1 |
| not modelled | 100.0 | 28 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
27 | d1vlba3 |
| not modelled | 100.0 | 25 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
28 | d1dgja3 |
| not modelled | 100.0 | 24 | Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like
29 | d1yh5a1 |
| not modelled | 70.8 | 16 | Fold:YggU-like Superfamily:YggU-like Family:YggU-like
30 | c2rghA_ |
| not modelled | 70.1 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
31 | d1dpta_ |
| not modelled | 67.5 | 16 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
32 | d1gd0a_ |
| not modelled | 63.8 | 22 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
33 | d1knwa2 |
| not modelled | 62.5 | 15 | Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain
34 | c3fwtA_ |
| not modelled | 61.6 | 19 | PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: crystal structure of leishmania major mif2
35 | d2gdga1 |
| not modelled | 61.5 | 19 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
36 | c3n2oA_ |
| not modelled | 60.9 | 17 | PDB header:lyase Chain: A: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus
37 | d1otfa_ |
| not modelled | 60.8 | 18 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like
38 | c2rgoA_ |
| not modelled | 59.9 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
39 | d1hfoa_ |
| not modelled | 59.6 | 21 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
40 | c2os5C_ |
| not modelled | 58.0 | 16 | PDB header:cytokine Chain: C: PDB Molecule:acemif; PDBTitle: macrophage migration inhibitory factor from ancylostoma ceylanicum
41 | c2xczA_ |
| not modelled | 56.0 | 16 | PDB header:immune system Chain: A: PDB Molecule:possible atls1-like light-inducible protein; PDBTitle: crystal structure of macrophage migration inhibitory factor2 homologue from prochlorococcus marinus
42 | c3b64A_ |
| not modelled | 53.6 | 17 | PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
43 | d1fima_ |
| not modelled | 53.4 | 20 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
44 | d2fmra_ |
| not modelled | 53.2 | 27 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
45 | d1uiza_ |
| not modelled | 53.1 | 17 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related
46 | c3gacD_ |
| not modelled | 52.3 | 12 | PDB header:cytokine Chain: D: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: structure of mif with hpp
47 | d2cpqa1 |
| not modelled | 51.3 | 23 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
48 | c2op8A_ |
| not modelled | 50.8 | 15 | PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase
49 | c3t5sA_ |
| not modelled | 49.5 | 13 | PDB header:immune system Chain: A: PDB Molecule:macrophage migration inhibitory factor; PDBTitle: structure of macrophage migration inhibitory factor from giardia2 lamblia
50 | c3abfB_ |
| not modelled | 49.3 | 32 | PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242)
51 | c3nzqB_ |
| not modelled | 49.3 | 29 | PDB header:lyase Chain: B: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600
52 | c3rr1B_ |
| not modelled | 48.2 | 18 | PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j
53 | c3nzpA_ |
| not modelled | 47.0 | 17 | PDB header:lyase Chain: A: PDB Molecule:arginine decarboxylase; PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53
54 | d1bjpa_ |
| not modelled | 46.8 | 18 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like
55 | d1mwwa_ |
| not modelled | 45.0 | 16 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:Hypothetical protein HI1388.1
56 | c2jwlB_ |
| not modelled | 44.9 | 7 | PDB header:membrane protein Chain: B: PDB Molecule:protein tolr; PDBTitle: solution structure of periplasmic domain of tolr from h.2 influenzae with saxs data
57 | c3m20A_ |
| not modelled | 44.2 | 19 | PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution
58 | c3ry0A_ |
| not modelled | 44.1 | 32 | PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway
59 | c3mlcC_ |
| not modelled | 43.5 | 16 | PDB header:isomerase Chain: C: PDB Molecule:fg41 malonate semialdehyde decarboxylase; PDBTitle: crystal structure of fg41msad inactivated by 3-chloropropiolate
60 | c3mb2G_ |
| not modelled | 41.8 | 23 | PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily
61 | d2aala1 |
| not modelled | 40.7 | 26 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MSAD-like
62 | c2kwpA_ |
| not modelled | 38.2 | 23 | PDB header:transcription Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: solution structure of the aminoterminal domain of e. coli nusa
63 | d1hh2p4 |
| not modelled | 37.9 | 36 | Fold:Transcription factor NusA, N-terminal domain Superfamily:Transcription factor NusA, N-terminal domain Family:Transcription factor NusA, N-terminal domain
64 | c2lfcA_ |
| not modelled | 36.2 | 35 | PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit; PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j
65 | c2x4kB_ |
| not modelled | 36.0 | 7 | PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)
66 | c1d7kB_ |
| not modelled | 35.0 | 14 | PDB header:lyase Chain: B: PDB Molecule:human ornithine decarboxylase; PDBTitle: crystal structure of human ornithine decarboxylase at 2.12 angstroms resolution
67 | c2ormA_ |
| not modelled | 31.1 | 8 | PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase hp0924; PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori.
68 | d1nera_ |
| not modelled | 29.9 | 18 | Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors
69 | d1d7ka2 |
| not modelled | 29.4 | 15 | Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain
70 | d1d4ca3 |
| not modelled | 27.4 | 29 | Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
71 | d1y0pa3 |
| not modelled | 26.8 | 24 | Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
72 | d1gyxa_ |
| not modelled | 26.6 | 5 | Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like
73 | c2hlhA_ |
| not modelled | 26.1 | 24 | PDB header:transferase Chain: A: PDB Molecule:nodulation fucosyltransferase; PDBTitle: crystal structure of fucosyltransferase nodz from bradyrhizobium
74 | c1vraA_ |
| not modelled | 25.8 | 22 | PDB header:transferase Chain: A: PDB Molecule:arginine biosynthesis bifunctional protein argj; PDBTitle: crystal structure of arginine biosynthesis bifunctional protein argj2 (10175521) from bacillus halodurans at 2.00 a resolution
75 | c1m8pB_ |
| not modelled | 25.8 | 25 | PDB header:transferase Chain: B: PDB Molecule:sulfate adenylyltransferase; PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state
76 | c3mt1B_ |
| not modelled | 25.8 | 13 | PDB header:lyase Chain: B: PDB Molecule:putative carboxynorspermidine decarboxylase protein; PDBTitle: crystal structure of putative carboxynorspermidine decarboxylase2 protein from sinorhizobium meliloti
77 | c2on3A_ |
| not modelled | 25.6 | 14 | PDB header:lyase Chain: A: PDB Molecule:ornithine decarboxylase; PDBTitle: a structural insight into the inhibition of human and2 leishmania donovani ornithine decarboxylases by 3-aminooxy-3 1-aminopropane
78 | d1hnja2 |
| not modelled | 24.1 | 19 | Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like
79 | d1f3ta2 |
| not modelled | 23.7 | 15 | Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain
80 | c3da1A_ |
| not modelled | 23.5 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.
81 | d1wufa2 |
| not modelled | 22.6 | 9 | Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like
82 | c2ppgB_ |
| not modelled | 22.3 | 20 | PDB header:isomerase Chain: B: PDB Molecule:putative isomerase; PDBTitle: crystal structure of putative isomerase from sinorhizobium meliloti
83 | c3e0mB_ |
| not modelled | 22.2 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb PDBTitle: crystal structure of fusion protein of msra and msrb
84 | d7odca2 |
| not modelled | 21.5 | 15 | Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain
85 | c1nwaA_ |
| not modelled | 21.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra; PDBTitle: structure of mycobacterium tuberculosis methionine2 sulfoxide reductase a in complex with protein-bound3 methionine
86 | d1nwaa_ |
| not modelled | 21.0 | 17 | Fold:Ferredoxin-like Superfamily:Peptide methionine sulfoxide reductase Family:Peptide methionine sulfoxide reductase
87 | c2oo6A_ |
| not modelled | 20.6 | 9 | PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400
88 | c1jqkE_ |
| not modelled | 20.2 | 26 | PDB header:oxidoreductase Chain: E: PDB Molecule:carbon monoxide dehydrogenase; PDBTitle: crystal structure of carbon monoxide dehydrogenase from2 rhodospirillum rubrum
89 | d1jqka_ |
| not modelled | 20.2 | 26 | Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase
90 | d1w55a2 |
| not modelled | 19.9 | 13 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
91 | c3cb3B_ |
| not modelled | 19.5 | 16 | PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate
92 | d2dt5a1 |
| not modelled | 19.4 | 14 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional repressor Rex, N-terminal domain
93 | d1u0ua2 |
| not modelled | 19.2 | 8 | Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like
94 | c3tjiA_ |
| not modelled | 19.2 | 11 | PDB header:lyase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, n-terminal PDBTitle: crystal structure of an enolase from enterobacter sp. 638 (efi target2 efi-501662) with bound mg
95 | c2jxuA_ |
| not modelled | 19.1 | 44 | PDB header:unknown function Chain: A: PDB Molecule:terb; PDBTitle: nmr solution structure of kp-terb, a tellurite resistance2 protein from klebsiella pneumoniae
96 | c3btnA_ |
| not modelled | 18.6 | 21 | PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein
97 | c3bjsB_ |
| not modelled | 18.6 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666
98 | d1up7a2 |
| not modelled | 18.4 | 13 | Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:AglA-like glucosidase
99 | c2pmpA_ |
| not modelled | 18.3 | 22 | PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from2 the isoprenoid biosynthetic pathway of arabidopsis thaliana

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0