Phyre 2 alignment of P77759 with d2jdqd1

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Job Description | P77759
Confidence | 2.54% | Date | Thu Jan 5 12:32:39 GMT 2012
Rank | 34 | Aligned Residues | 30
% Identity | 17% | Template | d2jdqd1
SCOP info | PB2 C-terminal domain-like | PB2 C-terminal domain-like | PB2 C-terminal domain-like
Resolution | 2.2

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |  | . | . | . | . |  |  | . | . | . | . | 80 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | D | P | L | Q | G | R | Y | I | T | Q | D | P | I | G | . | L | E | G | G | . | . | W | S | L | Y | A | Y | P | L | N | P | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | D | R | R | Y | G | P | A | L | S | I | N | E | L | S | N | L | A | K | G | E | K | A | N | V | L | I | G | Q | G | D | V | V
Template Known Secondary structure |  |  |  | G | G | G |  | S |  | B |  | T | T | G | G | G | G | S |  | T | T |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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