Phyre 2 alignment of P77759 with c2x12A_

Return to main results | Retrieve Phyre Job Id

Job Description | P77759
Confidence | 3.46% | Date | Thu Jan 5 12:32:39 GMT 2012
Rank | 19 | Aligned Residues | 42
% Identity | 31% | Template | c2x12A_
PDB info | PDB header:cell adhesion | Chain: A: PDB Molecule:fimbriae-associated protein fap1; | PDBTitle: ph-induced modulation of streptococcus parasanguinis2 adhesion by fap1 fimbriae
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 3 | . | . | . | . |  | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | L | M | D | A | . | D | G | N | I | A | W | S | G | E | Y | D | E | W | G | N | Q | L | N | E | E | N | P | H | H | L | H | Q | P | Y | R | L | P | G | Q | Q | Y | D | K | E | S | G
Query Conservation |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | V | Y | D | S | A | T | G | K | I | S | W | T | V | E | Y | D | P | T | T | I | L | K | S | . | . | . | . | P | A | L | K | T | L | K | T | Y | T | G | I | Y | I | D | T | S | S | D
Template Known Secondary structure |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |  |  | . | . | . | . | G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |  |  |  |  | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions