Phyre 2 alignment of P77759 with c1m4xC_

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Job Description | P77759
Confidence | 4.78% | Date | Thu Jan 5 12:32:39 GMT 2012
Rank | 12 | Aligned Residues | 18
% Identity | 39% | Template | c1m4xC_
PDB info | PDB header:virus | Chain: C: PDB Molecule:pbcv-1 virus capsid; | PDBTitle: pbcv-1 virus capsid, quasi-atomic model
Resolution | 28.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | G | W | S | L | Y | A | Y | P | L | N | P | V | N | G | I | D | P | L | G
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Template Sequence |  | G | V | Y | L | Y | S | F | A | L | K | P | A | G | R | . | Q | P | S | G
Template Known Secondary structure |  | T |  |  |  |  |  | S | S | S |  | T | T | S | S | . | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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