 |
| Job Description | P77759 | | Confidence | 3.46% | Date | Thu Jan 5 12:32:39 GMT 2012 |
| Rank | 19 | Aligned Residues | 42 |
| % Identity | 31% | Template | c2x12A_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:fimbriae-associated protein fap1; |
PDBTitle: ph-induced modulation of streptococcus parasanguinis2 adhesion by fap1 fimbriae
|
| Resolution | 2.90 Å |
|
|   |   |
3 | . | . | . | . | |
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | L | M | D | A | . |
D | G | N | I | A | W | S | G | E | Y | D | E | W | G | N | Q | L | N | E | E | N | P | H | H | L | H | Q | P | Y | R | L | P | G | Q | Q | Y | D | K | E | S | G |
| Query Conservation |   |
|
|   |
|   | . |   |
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
| Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
A | V | Y | D | S | A | T | G | K | I | S | W | T | V | E | Y | D | P | T | T | I | L | K | S | . |
. |
. |
. |
P | A | L | K | T | L | K | T | Y | T | G | I | Y | I | D | T | S | S | D |
| Template Known Secondary structure |   |
 |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |
| T | T | T | T | T |
|
| . | . | . | . | G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |
| T | T |
|
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
| . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
|
|
|
. | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|