9 c1cygA_ Probab=100.00  E-value=0  Score=522.11  Aligned_columns=486  Identities=13%

Q ss_pred             CCCCCCCEEEEEEEHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHH--HHHHCCCCEEEECCC
Q ss_conf             732225516999965650578612555541445412541578885599962488989999799--899569968993486
Q batch____       173 SPSGQQETFKILINLEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMS--EFARCHYGYIQIPPV  250 (750)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilha~~~~~~~i~~~~~--~i~~~gy~~i~~~p~  250 (750)
                      +|.+.++++||||++|||++|+++..-...+......-...-.++-        |+.|+++|+  +|+++|+++|+++||
T Consensus         5 ~~~~w~~~~iY~i~~drF~~g~~~~~~~~~~~~~~~~~~~~~~gGd--------~~gi~~kLd~pYl~~LGv~~i~l~P~   76 (680)
T c1cygA_           5 NKVNFTSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGD--------WQGIINKINDGYLTDMGVTAIWISQP   76 (680)
T ss_dssp             CTTCCTTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCC--------HHHHHHHHHTSTTTTTTCCEEEECCC
T ss_pred             CHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------HHHHHHHHCHHHHHHCCCCEEEECCC
T ss_conf             8156415746999320013788888876655666765544415785--------99999762887799729989998775


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             10156766777766667600012340122175688999999999999998998999997421068877544445677666
Q batch____       251 TTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADI  330 (750)
Q Consensus       251 ~~~~~~~~~~~~~~~~~WYHgYqp~DY~~IDp~lGT~eDFk~LV~aAHa~GIkVIlDvV~NHta~~~~~~~~~~~~~~~~  330 (750)
                      +++...  .......+.|||||+++||++|||+|||+||||+||++||++|||||||+|+|||+..+.++......+...
T Consensus        77 ~~~~~~--~~~~~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~lV~~aH~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~  154 (680)
T c1cygA_          77 VENVFS--VMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLY  154 (680)
T ss_dssp             EEECCC--CCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEE
T ss_pred             CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             146665--555666767777756562433563328999999999999988988999996233688775432000157345


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             55444466677754445655467666666676655356655466212453566667666555100234623576533458
Q batch____       331 RAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPK  410 (750)
Q Consensus       331 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~w~d~~~v~~~~L~gLpDLnte  410 (750)
                      ..++...........+.                                   +......|+++.+..+|.+.+|+|||++
T Consensus       155 ~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~dln~~  199 (680)
T c1cygA_         155 DNGTLLGGYTNDANMYF-----------------------------------HHNGGTTFSSLEDGIYRNLFDLADLNHQ  199 (680)
T ss_dssp             ETTEEEECSTTCTTCCB-----------------------------------CCSCBCCCSSHHHHHSSBSTTEEEBCTT
T ss_pred             CCCCCCCCCCCCCCCCC-----------------------------------CCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf             46530467887656653-----------------------------------3668875566563100577888854689


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH
Q ss_conf             99999999999999985699779866506788788756555543100112333210012234566410122323677530
Q batch____       411 SDQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLVTCQLDE  490 (750)
Q Consensus       411 np~V~~~l~~~l~~Wid~GVDGFRiDaaKHi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gEv~~~~~~~~  490 (750)
                      ||+|+++|.+++++|+++||||||||++|||+.++|+.+..........                 +.++|++...... 
T Consensus       200 n~~v~~~~~~~~~~w~~~giDGfR~D~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~e~~~~~~~~-  261 (680)
T c1cygA_         200 NPVIDRYLKDAVKMWIDMGIDGIRMDAVKHMPFGWQKSLMDEIDNYRPV-----------------FTFGEWFLSENEV-  261 (680)
T ss_dssp             SHHHHHHHHHHHHHHHTTTCCEEEESCGGGSCSHHHHHHHHHHHHHCCC-----------------EEEECCCCCTTCC-
T ss_pred             CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCE-----------------EEEEEEECCCCCC-
T ss_conf             9999999999999998445883776141038998999999998621880-----------------8999864477532-


Q ss_pred             HHHHHHHHCCCCCCEECCHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCCCCCC-CEEEECCCCCCCCCCCCCCCCCCHHH
Q ss_conf             211011210366412320889999998506-8878999741342056678311-44773145867676522333476089
Q batch____       491 QQMSSLLYERDDLSAIDFSLLMKTIKAFSF-GGDLQTLASKPGSTISSIPSER-RILININHDFPNNGNLFNDFLFNHQQ  568 (750)
Q Consensus       491 ~~~~~~~~~~~~~sv~dF~~~~~i~~a~~~-~g~l~~L~~~~~~~~~~~p~~~-~vtFv~NHD~~R~~~~~~~~~~~d~a  568 (750)
                      ......+...+..++++|++...+++++.. .+.++.+.+.........+... +++|++|||+.|..+..+     +.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~nHD~~R~~~~~~-----~~~  336 (680)
T c1cygA_         262 DANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAYDEVLDQVTFIDNHDMDRFMIDGG-----DPR  336 (680)
T ss_dssp             CHHHHHHHHHSSCEEBCHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHCTTGGGCEECSCCTTSCCSCCTTC-----CTH
T ss_pred             CCHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCC-----CHH
T ss_conf             201333036777145420799999998604877899999999887641886243289605787550323179-----999


Q ss_pred             HHHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
Q ss_conf             98999999997589817995535641677889877778878876457510799999999999873123431244442222
Q batch____       569 DEQLAMAYIAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQLYNEFHALYIDKAGIWSAFEGVSA  648 (750)
Q Consensus       569 ~~kLA~aflla~p~G~PlIYyGeE~~~~~~~~~~~~~~p~~~~~~w~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~  648 (750)
                      +++||+++||++| |+|+||||+|+++.+..+...+.....+.   .+.++..+++.++++|+  +..+...+....+..
T Consensus       337 ~~~~a~~~~l~~p-G~P~iyyG~E~g~~~~~~~~~r~~~~~~~---~~~~~~~~~~~L~~lR~--~~~al~~G~~~~~~~  410 (680)
T c1cygA_         337 KVDMALAVLLTSR-GVPNIYYGTEQYMTGNGDPNNRKMMSSFN---KNTRAYQVIQKLSSLRR--NNPALAYGDTEQRWI  410 (680)
T ss_dssp             HHHHHHHHHHHSS-SEEEEETTGGGTCCCCSTTGGGCCCCCCC---SCSHHHHHHHHHHHHHH--HCHHHHHCEEEEEEE
T ss_pred             HHHHHHHHHHHHC-CCEEEECCEECCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHH--HCHHHHCCEEEEEEE
T ss_conf             9999999999908-97199956352436876865432158898---88589999999999987--683221571789950


Q ss_pred             CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEE--EEECCCCCCEEEECCCCCCEEECCCCCCCCCCCCEEEECCCEE
Q ss_conf             59889997267656556784189999789984679--9844468854676125630010156545566775057129859
Q batch____       649 TKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEG--TWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTL  726 (750)
Q Consensus       649 ~~~vlaF~Rgd~~~~~~~~d~glVviN~~~~~~~~--t~~T~l~~G~y~dv~s~~~~~~~~~~~~v~~~gkt~tv~gG~v  726 (750)
                      ++++++|.|      ...++.++|++|++......  .+.+.++.|+|.+..++.          ......+....++..
T Consensus       411 ~~~v~af~R------~~~~~~~~v~~N~~~~~~~~~~~~~~~~~~gt~~~~~~~~----------~~~~~~t~~~~~~~~  474 (680)
T c1cygA_         411 NGDVYVYER------QFGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGL----------LDGNTIQVGSNGSVN  474 (680)
T ss_dssp             CSSEEEEEE------EETTEEEEEEEECCSSCCEEECSCBCSSCSEEECCTTTTT----------TCCCCEEECGGGBBC
T ss_pred             CCCEEEEEE------ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------CCCCEEEECCCCCEE
T ss_conf             794899999------6299429984045555543112222232212222100134----------555202320456403


Q ss_pred             EEEECCCEEEEEECCCCCCCEE
Q ss_conf             9998896289995188885404
Q batch____       727 NINIPGRSALLLGKTGEPPNYL  748 (750)
Q Consensus       727 tvtiPa~SavVL~~~~~p~~~~  748 (750)
                      ++++++.++.+...+.......
T Consensus       475 t~~~~~~~~~~~~~~~~~~~~~  496 (680)
T c1cygA_         475 AFDLGPGEVGVWAYSATESTPI  496 (680)
T ss_dssp             CEEECTTCEEEEEECCCCCSCE
T ss_pred             EEEECCCCCEEEECCCCCCCCC
T ss_conf             5640677520000245654323