39 d1pama4 Probab=100.00  E-value=0  Score=439.49  Aligned_columns=399  Identities=15%

Q ss_pred             CCCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHH--HHHHCCCCEE
Q ss_conf             57747732225516999965650578612555541445412541578885599962488989999799--8995699689
Q batch____       168 NINVTSPSGQQETFKILINLEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMS--EFARCHYGYI  245 (750)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilha~~~~~~~i~~~~~--~i~~~gy~~i  245 (750)
                      +..+.+|.|.|.++||||+++||.+|+++++.............+.-.++-        |++|+++|+  +|+++|+++|
T Consensus         3 ~~~~~~~~w~~~~viY~i~~~~F~~~d~~~~~~~~~~~~~~~~~~~~~gGd--------~~gi~~kLD~~YLk~LGv~~I   74 (406)
T d1pama4           3 DTSVSNKQNFSTDVIYQIFTDRFSDGNPANNPTGAAFDGSCTNLRLYCGGD--------WQGIINKINDGYLTGMGITAI   74 (406)
T ss_dssp             TTSTTCCSCCTTCCEEECCGGGTCCSCGGGCCCGGGBCTTCCSTTSBCCCC--------HHHHHHHHHTTTTGGGTCCEE
T ss_pred             CCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------HHHHHHHCCHHHHHHCCCCEE
T ss_conf             888888335302828998211135778676766666666766655646886--------899997449888996299899


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             93486101567667777666676000123401221756889999999999999989989999974210688775444456
Q batch____       246 QIPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDY  325 (750)
Q Consensus       246 ~~~p~~~~~~~~~~~~~~~~~~WYHgYqp~DY~~IDp~lGT~eDFk~LV~aAHa~GIkVIlDvV~NHta~~~~~~~~~~~  325 (750)
                      +++||.++... ........+.+||||+|+||++|||+|||++|||+||++||++||+||||+|+|||+..+.++.....
T Consensus        75 ~L~Pi~~~~~~-~~~~~~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~  153 (406)
T d1pama4          75 WISQPVENIYS-VINYSGVNNTAYHGYWARDFKKTNPAYGTMQDFKNLIDTAHAHNIKVIIDFAPNHTSPASSDDPSFAE  153 (406)
T ss_dssp             EECCCEEECCC-CEEETTEEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTT
T ss_pred             EECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCC
T ss_conf             98776346554-44556667677777465745433734389999999999998789899997604524687632100002


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             77666554444666777544456554676666666766553566554662124535666676665551002346235765
Q batch____       326 PSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMP  405 (750)
Q Consensus       326 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~w~d~~~v~~~~L~gLp  405 (750)
                      .......++.......+...+..                                   .....++........+.+.+++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~  198 (406)
T d1pama4         154 NGRLYDNGNLLGGYTNDTQNLFH-----------------------------------HYGGTDFSTIENGIYKNLYDLA  198 (406)
T ss_dssp             TTCEEETTEEEECSTTCTTCCBC-----------------------------------CSCBCCCSSHHHHHHSBSTTEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCC-----------------------------------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf             46555676646667766667346-----------------------------------6677777776762006855354


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             33458999999999999999856997798665067887887565555431001123332100122345664101223236
Q batch____       406 KTTPKSDQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLVT  485 (750)
Q Consensus       406 DLntenp~V~~~l~~~l~~Wid~GVDGFRiDaaKHi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gEv~~~  485 (750)
                      |||++||.|++++.+++++|+++||||||+|+++|++.++|+.+.......                 ...+..+|++..
T Consensus       199 dln~~~p~v~~~~~~~~~~w~e~giDGfR~D~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~E~~~~  261 (406)
T d1pama4         199 DLNHNNSSVDVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNY-----------------KPVFTFGEWFLG  261 (406)
T ss_dssp             EBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHH-----------------SCCEEEECCCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHC-----------------CCEEEEEEECCC
T ss_conf             315898899999999999998449978887575658989999999998515-----------------963999831167


Q ss_pred             CCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCCCCCC-CEEEECCCCCCCCCCCCCCCC
Q ss_conf             77530211011210366412320889999998506-8878999741342056678311-447731458676765223334
Q batch____       486 CQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSF-GGDLQTLASKPGSTISSIPSER-RILININHDFPNNGNLFNDFL  563 (750)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~sv~dF~~~~~i~~a~~~-~g~l~~L~~~~~~~~~~~p~~~-~vtFv~NHD~~R~~~~~~~~~  563 (750)
                      .......+........ .++++|++...++.++.. ......+.+.........+... .++|++|||++|..+..+   
T Consensus       262 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~---  337 (406)
T d1pama4         262 VNEISPEYHQFANESG-MSLLDFRFAQKARQVFRDNTDNMYGLKAMLEGSEVDYAQVNDQVTFIDNHDMERFHTSNG---  337 (406)
T ss_dssp             TTCCCHHHHHHHHHSS-SEEBCHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHSTTGGGCEECSCCTTSCCSCCTTS---
T ss_pred             CHHHHHHHHHCCCCCC-CEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCHHHHHCC---
T ss_conf             5245346652366677-122071799999999708887789999998523431567021043167876223543058---


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             76089989999999975898179955356416778898777788788764575107999999999998731234
Q batch____       564 FNHQQDEQLAMAYIAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQLYNEFHALYIDKA  637 (750)
Q Consensus       564 ~~d~a~~kLA~aflla~p~G~PlIYyGeE~~~~~~~~~~~~~~p~~~~~~w~~~~~~~~~~~~~~~~~l~~~~~  637 (750)
                        +.+++++|++++|++| |+|+||||+|+++.+..+...+..   ....-.+..+.++++.++++|+......
T Consensus       338 --~~~~~~~a~~~~~~~p-G~P~iy~G~E~g~~g~~d~~~r~~---~~~~~~~~~~~~~~~~L~~lR~~~paL~  405 (406)
T d1pama4         338 --DRRKLEQALAFTLTSR-GVPAIYYGSEQYMSGGNDPDNRAR---LPSFSTTTTAYQVIQKLAPLRKSNPAIA  405 (406)
T ss_dssp             --CHHHHHHHHHHHHHSS-SEEEEETTGGGTCCCCSTTGGGCC---CCCCCSCSHHHHHHHHHTTHHHHCHHHH
T ss_pred             --CHHHHHHHHHHHHHHC-CCEEEECCHHCCCCCCCCHHHCCC---CCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             --2899999999999828-971987671015078856322454---7887564189999999999998762135


