BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (111 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8X2T9 Uncharacterized protein yibV n=21 Tax=Enterobact...   224   5e-58
UniRef50_B6HPQ9 Pc22g03060 protein n=32 Tax=Saccharomyceta RepID...    40   0.016
UniRef50_Q0URW8 Putative uncharacterized protein n=1 Tax=Phaeosp...    38   0.099

>UniRef50_Q8X2T9 Uncharacterized protein yibV n=21 Tax=Enterobacteriaceae
           RepID=YIBV_ECO57
          Length = 111

 Score =  224 bits (572), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK 60
           MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK
Sbjct: 1   MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK 60

Query: 61  IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH 111
           IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH
Sbjct: 61  IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH 111


>UniRef50_B6HPQ9 Pc22g03060 protein n=32 Tax=Saccharomyceta RepID=B6HPQ9_PENCW
          Length = 550

 Score = 40.4 bits (93), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 26  YFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLL 74
           YF C A  + +GLA     D    L S+ N+ R++I  GL+  Y CY++
Sbjct: 66  YFLCSAIRSNVGLAQTMNTDTGHDLGSVLNLTRHQISTGLALFYVCYVI 114


>UniRef50_Q0URW8 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
          RepID=Q0URW8_PHANO
          Length = 470

 Score = 37.7 bits (86), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 26 YFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLL 74
          YF C A  + +GLA     D K  L S+ NI   ++  GL+  Y CY++
Sbjct: 46 YFMCSAIRSNIGLAQTMNLDKKHDLGSVLNITPKQVSTGLALFYVCYVI 94


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q8X2T9 Uncharacterized protein yibV n=21 Tax=Enterobact...   216   2e-55

Sequences not found previously or not previously below threshold:

UniRef50_B6HPQ9 Pc22g03060 protein n=32 Tax=Saccharomyceta RepID...    41   0.014


CONVERGED!
>UniRef50_Q8X2T9 Uncharacterized protein yibV n=21 Tax=Enterobacteriaceae
           RepID=YIBV_ECO57
          Length = 111

 Score =  216 bits (550), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK 60
           MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK
Sbjct: 1   MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK 60

Query: 61  IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH 111
           IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH
Sbjct: 61  IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH 111


>UniRef50_B6HPQ9 Pc22g03060 protein n=32 Tax=Saccharomyceta RepID=B6HPQ9_PENCW
          Length = 550

 Score = 40.9 bits (94), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 26  YFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLL 74
           YF C A  + +GLA     D    L S+ N+ R++I  GL+  Y CY++
Sbjct: 66  YFLCSAIRSNVGLAQTMNTDTGHDLGSVLNLTRHQISTGLALFYVCYVI 114


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.317    0.130    0.371 

Lambda     K      H
   0.267   0.0405    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 367,154,939
Number of Sequences: 3077464
Number of extensions: 11228265
Number of successful extensions: 27276
Number of sequences better than 1.0e-01: 2
Number of HSP's better than  0.1 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27271
Number of HSP's gapped (non-prelim): 5
length of query: 111
length of database: 1,040,396,356
effective HSP length: 79
effective length of query: 32
effective length of database: 797,276,700
effective search space: 25512854400
effective search space used: 25512854400
T: 11
A: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 87 (38.1 bits)