 |
| Job Description | P0AF63 | | Confidence | 96.96% | Date | Thu Jan 5 11:25:20 GMT 2012 |
| Rank | 52 | Aligned Residues | 63 |
| % Identity | 19% | Template | d3bwga1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| GntR-like transcriptional regulators
|
| Resolution | 2.09 |
|
 |
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | R | A | L | I | Y | M | A | S | L | P | E | G | R | M | T | . |
S | I | S | E | V | T | D | V | Y | G | V | S | R | N | H | M | V | K | I | I | N | Q | L | S | R | A | G | Y | V | T | A | V | R | G | K | N | G | G | I | R | L | G | K | P | A | S | A | I |
| Query Conservation |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   | . |
|   |   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
I | E | T | Y | I | E | E | H | Q | L | Q | Q | G | D | K | L | P | V | L | E | T | L | X | A | Q | F | E | V | S | K | S | T | I | T | K | S | L | E | L | L | E | Q | K | G | A | I | F | Q | V | R | G | S | . |
G | I | F | V | R | K | H | K | R | K | G | Y |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
| T | T |
| B |
|
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | T | . |  |  |  |  |
|
|
|
|
|
| S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|