Phyre 2 alignment of P76297 with d1ooaa2

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Job Description | P76297
Confidence | 3.57% | Date | Thu Jan 5 12:21:39 GMT 2012
Rank | 48 | Aligned Residues | 29
% Identity | 28% | Template | d1ooaa2
SCOP info | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | Rel/Dorsal transcription factors, DNA-binding domain
Resolution | 2.45

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 120 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | A | A | A | E | P | L | R | F | I | W | E | V | P | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | G | R | L | I | P | P | L | K | V | Q | R | N | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | P | K | Q | R | G | F | R | F | R | Y | V | C | E | G | P | S | H | G | G | L | P | G | A | S | S | E | K | N | K | K | S | Y | P | Q | V | K | I | C | N | Y | V
Template Known Secondary structure |  |  | B |  | S | S | S | B |  |  | B |  | G | G | G |  | S |  |  |  |  |  |  | B | T | T |  |  | S | S | S |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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