Phyre 2 alignment of P76297 with d1xd3a_

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Job Description | P76297
Confidence | 2.31% | Date | Thu Jan 5 12:21:39 GMT 2012
Rank | 87 | Aligned Residues | 29
% Identity | 34% | Template | d1xd3a_
SCOP info | Cysteine proteinases | Cysteine proteinases | Ubiquitin carboxyl-terminal hydrolase UCH-L
Resolution | 1.45

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | S | G | T | T | V | A | F | S | G | I | A | A | A | E | P | L | R | F | I | W | E | V | P | G | G | G | R | L | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | E | G | Q | T | E | A | P | S | I | D | E | K | V | D | . | L | H | F | I | A | L | V | H | V | D | G | H | L | Y
Template Known Secondary structure |  | T |  | S | S | S |  |  |  |  | T | T | S |  |  |  | . |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |  | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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