Phyre 2 alignment of P76297 with c3spaA_

Return to main results | Retrieve Phyre Job Id

Job Description | P76297
Confidence | 10.19% | Date | Thu Jan 5 12:21:39 GMT 2012
Rank | 12 | Aligned Residues | 18
% Identity | 17% | Template | c3spaA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial; | PDBTitle: crystal structure of human mitochondrial rna polymerase
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | E | P | L | R | F | I | W | E | V | P | G | G | G | R | L | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | R | V | F | W | L | P | H | N | M | D | F | R | G | R | T | Y | P
Template Known Secondary structure |  | T | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 791 | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions