18/01/2012 21:04:11 : INFO  : Run start: Wed Jan 18 21:04:10 GMT 2012
18/01/2012 21:04:18 : INFO  : Initialised job
18/01/2012 21:04:20 : INFO  : Renaming log file 'phyre2_20120118_210409.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/17f2fe16edaaed92/phyre_20120118_210409.log'
18/01/2012 21:04:21 : INFO  : Initialised job:
Sequence
>batch____
MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWRY
QLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPPLKV
QRNEVIVNYR

18/01/2012 21:04:24 : INFO  : Checked sequence
18/01/2012 21:04:28 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 21:04:29 : INFO  : PSI-BLAST 3 iterations
18/01/2012 21:05:20 : INFO  : PSI-BLAST 5 iterations
18/01/2012 21:05:53 : INFO  : Finished PSI-BLAST
18/01/2012 21:05:56 : INFO  : Running Buildali to generate a3m file
18/01/2012 21:09:01 : INFO  : Converting to HMM
18/01/2012 21:09:03 : INFO  : Calibrating HMM
18/01/2012 21:09:15 : INFO  : Searching HMM database
18/01/2012 21:12:30 : INFO  : Finished buildali
18/01/2012 21:12:31 : INFO  : Predicting secondary structure
18/01/2012 21:12:42 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 21:12:45 : INFO  : Predicting Disordered regions
18/01/2012 21:12:50 : INFO  : Predicted Disorder (Disopred)
18/01/2012 21:12:54 : INFO  : Running memsat_svm check
18/01/2012 21:16:10 : INFO  : Running memsat_svm full
18/01/2012 21:22:41 : INFO  : Predicted Transmembrane (memsat_svm) ID '17f2fe16edaaed92'
18/01/2012 21:22:43 : INFO  : Initialising fold library search
18/01/2012 21:22:47 : INFO  : Initialised search input
18/01/2012 21:22:50 : INFO  : Building Ensemble models
18/01/2012 21:22:54 : INFO  : Building hh.d1jpya_.model.1.pdb
18/01/2012 21:23:13 : INFO  : Building d1jpya_.1.pdb
18/01/2012 21:23:30 : INFO  : Building c2z0bB_.2.pdb
18/01/2012 21:23:48 : INFO  : Building c2kv5A_.3.pdb
18/01/2012 21:24:06 : INFO  : Building c2wskA_.4.pdb
18/01/2012 21:24:25 : INFO  : Building d2zkmx4.5.pdb
18/01/2012 21:24:43 : INFO  : Building d1qasa3.6.pdb
18/01/2012 21:25:04 : INFO  : Building d1cyga2.7.pdb
18/01/2012 21:25:23 : INFO  : Building d1kpta_.8.pdb
18/01/2012 21:25:42 : INFO  : Building c3cdzA_.9.pdb
18/01/2012 21:26:00 : INFO  : Building d3bmva2.10.pdb
18/01/2012 21:26:19 : INFO  : Building d1a73a_.11.pdb
18/01/2012 21:26:37 : INFO  : Building c3spaA_.12.pdb
18/01/2012 21:26:55 : INFO  : Building c3pnrB_.13.pdb
18/01/2012 21:27:13 : INFO  : Building d1iz5a2.14.pdb
18/01/2012 21:27:30 : INFO  : Building d1kula_.15.pdb
18/01/2012 21:27:47 : INFO  : Building c3l81A_.16.pdb
18/01/2012 21:28:05 : INFO  : Building c1djyB_.17.pdb
18/01/2012 21:28:23 : INFO  : Building d1ud9a2.18.pdb
18/01/2012 21:28:40 : INFO  : Building c2ix2A_.19.pdb
18/01/2012 21:28:57 : INFO  : Building d1mswd_.20.pdb
18/01/2012 21:29:34 : INFO  : Finished HH model building
18/01/2012 21:29:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 21:31:50 : INFO  : html domain output complete ID '17f2fe16edaaed92'
18/01/2012 21:44:49 : INFO  : Run end  : Wed Jan 18 21:44:47 GMT 2012
