Phyre 2 alignment of P76297 with d2gica1

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Job Description | P76297
Confidence | 2.37% | Date | Thu Jan 5 12:21:39 GMT 2012
Rank | 83 | Aligned Residues | 19
% Identity | 32% | Template | d2gica1
SCOP info | Rhabdovirus nucleoprotein-like | Rhabdovirus nucleoprotein-like | Rhabdovirus nucleocapsid protein
Resolution | 2.92

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | G | M | W | Q | A | S | S | V | G | I | T | L | N | H | R | G | E | S | M | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | K | D | W | . | . | S | S | F | G | I | N | I | G | K | A | G | D | T | I | G
Template Known Secondary structure |  | S | S |  |  | . | . |  |  | T | T |  |  |  |  |  | T | T |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 85 | . | . | . |  |  | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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