BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (69 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 139 4e-32 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 118 7e-26 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 108 7e-23 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 100 2e-20 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 95 8e-19 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 93 3e-18 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 91 2e-17 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 89 4e-17 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 86 4e-16 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 86 5e-16 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 86 5e-16 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 85 7e-16 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 85 7e-16 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 84 1e-15 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 84 2e-15 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 84 2e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 83 3e-15 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 83 3e-15 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 83 3e-15 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 82 5e-15 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 82 6e-15 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 82 6e-15 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 82 6e-15 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 81 8e-15 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 81 9e-15 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 81 9e-15 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 81 1e-14 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 81 1e-14 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 80 2e-14 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 80 2e-14 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 80 2e-14 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 79 4e-14 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 79 4e-14 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 79 5e-14 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 79 5e-14 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 79 5e-14 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 79 5e-14 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 78 8e-14 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 78 9e-14 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 78 9e-14 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 78 1e-13 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 78 1e-13 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 77 1e-13 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 77 1e-13 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 77 1e-13 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 77 1e-13 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 77 2e-13 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 77 2e-13 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 77 2e-13 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 77 2e-13 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 77 2e-13 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 77 2e-13 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 76 3e-13 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 76 3e-13 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 75 4e-13 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 75 5e-13 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 75 6e-13 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 75 7e-13 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 75 8e-13 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 75 8e-13 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 75 8e-13 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 75 8e-13 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 74 1e-12 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 74 1e-12 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 74 2e-12 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 73 3e-12 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 73 3e-12 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 73 3e-12 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 72 4e-12 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 72 4e-12 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 72 4e-12 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 72 4e-12 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 72 4e-12 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 72 4e-12 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 72 5e-12 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 72 6e-12 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 72 7e-12 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 72 7e-12 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 71 1e-11 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 71 1e-11 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 71 1e-11 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 71 1e-11 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 71 1e-11 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 71 1e-11 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 70 2e-11 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 70 2e-11 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 70 3e-11 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 70 3e-11 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 69 3e-11 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 69 4e-11 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 69 4e-11 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 69 4e-11 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 69 4e-11 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 69 5e-11 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 69 5e-11 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 68 8e-11 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 68 8e-11 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 67 1e-10 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 67 1e-10 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 67 2e-10 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 67 2e-10 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 67 2e-10 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 67 2e-10 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 65 5e-10 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 65 5e-10 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 65 5e-10 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 65 6e-10 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 65 7e-10 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 65 7e-10 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 65 7e-10 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 65 9e-10 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 65 1e-09 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 65 1e-09 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 64 1e-09 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 64 1e-09 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 64 1e-09 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 64 1e-09 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 64 1e-09 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 64 1e-09 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 64 2e-09 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 64 2e-09 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 64 2e-09 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 64 2e-09 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 64 2e-09 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 64 2e-09 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 63 3e-09 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 63 3e-09 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 63 3e-09 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 63 3e-09 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 63 3e-09 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 63 3e-09 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 62 5e-09 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 62 5e-09 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 62 5e-09 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 62 5e-09 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 62 5e-09 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 62 6e-09 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 62 6e-09 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 62 6e-09 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 62 7e-09 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 62 7e-09 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 62 8e-09 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 61 8e-09 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 61 9e-09 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 61 1e-08 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 61 1e-08 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 61 1e-08 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 61 1e-08 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 61 1e-08 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 61 1e-08 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 61 1e-08 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 60 2e-08 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 60 2e-08 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 60 2e-08 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 60 2e-08 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 60 2e-08 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 60 2e-08 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 60 3e-08 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 60 3e-08 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 60 3e-08 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 59 3e-08 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 59 3e-08 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 59 4e-08 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 59 4e-08 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 59 4e-08 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 59 4e-08 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 59 4e-08 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 59 4e-08 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 59 4e-08 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 59 5e-08 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 59 5e-08 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 59 5e-08 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 59 5e-08 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 59 6e-08 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 59 7e-08 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 58 7e-08 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 58 8e-08 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 58 9e-08 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 58 9e-08 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 58 9e-08 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 58 1e-07 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 58 1e-07 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 57 1e-07 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 57 1e-07 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 57 1e-07 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 57 1e-07 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 57 1e-07 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 57 2e-07 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 57 2e-07 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 57 2e-07 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 57 2e-07 UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodoc... 57 2e-07 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 57 2e-07 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 57 2e-07 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 57 2e-07 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 57 3e-07 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 56 3e-07 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 56 3e-07 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 56 4e-07 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 56 4e-07 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 55 5e-07 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 55 5e-07 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 55 5e-07 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 55 5e-07 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 55 6e-07 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 55 6e-07 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 55 6e-07 UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Plancto... 55 8e-07 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 55 8e-07 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 55 9e-07 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 55 9e-07 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 55 9e-07 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 55 1e-06 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 55 1e-06 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 54 1e-06 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 54 1e-06 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 54 1e-06 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 54 1e-06 UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepI... 54 1e-06 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 54 2e-06 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 54 2e-06 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 54 2e-06 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 53 2e-06 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 53 3e-06 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 53 4e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 52 4e-06 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 52 4e-06 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 52 5e-06 UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=La... 52 5e-06 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 52 5e-06 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 52 6e-06 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 52 7e-06 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 52 7e-06 UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio ... 52 7e-06 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 52 8e-06 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 52 8e-06 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 52 8e-06 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 52 8e-06 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 51 1e-05 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 51 1e-05 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 50 2e-05 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 50 2e-05 UniRef50_C0N6M9 Putative uncharacterized protein n=1 Tax=Methylo... 50 2e-05 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 50 2e-05 UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 50 2e-05 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 50 3e-05 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 50 3e-05 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 50 3e-05 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 50 3e-05 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 50 3e-05 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PAAVNVTAI 69 PAAVNVTAI Sbjct: 61 PAAVNVTAI 69 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PAAVNVTAI 69 P+A NV A+ Sbjct: 61 PSAANVIAL 69 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 51/67 (76%), Positives = 58/67 (86%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWF+ KGFGFI+PADGSKDVFVHFSAIQGN +KTL EGQNVEF I+ GQKGP+ Sbjct: 4 KMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPS 63 Query: 63 AVNVTAI 69 AVNV A+ Sbjct: 64 AVNVVAL 70 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/68 (70%), Positives = 52/68 (76%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KI G VKWFN KGFGFITP DGSKDVFVHFSAIQ N F+TL E Q VEF + G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 AAVNVTAI 69 +AVNV A+ Sbjct: 63 SAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 44/64 (68%), Positives = 50/64 (78%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 Query: 63 AVNV 66 A NV Sbjct: 64 AANV 67 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A +G+VKWFNE KGFGFI +G DVFVH+SAIQ +GFKTL EGQ V FE+Q GQKGP Sbjct: 24 AMPEGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGP 82 Query: 62 AAVNVTAI 69 AAVNV I Sbjct: 83 AAVNVKPI 90 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFI P D S DVFVHFSAIQGNGFK L E VEFE QDG KG A N Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VTAI 69 VT + Sbjct: 64 VTKL 67 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 1/61 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFIT DGS DVFVHFSAIQG+G+KTL EGQ V FE++D +GP AVN Sbjct: 4 GTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAVN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 46/64 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFITP G D+F HFS +QGNGFK+L EGQ V + GQKGPAA Sbjct: 63 GTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAATK 122 Query: 66 VTAI 69 + I Sbjct: 123 IEPI 126 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFN KGFGFI +G DVFVHFSAIQG+GFKTL EGQ V FEI +G +GP A N Sbjct: 4 GKVKWFNSEKGFGFI-EVEGGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAAN 62 Query: 66 VT 67 VT Sbjct: 63 VT 64 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWFN KGFGFI ADG+ DVFVHFSAI G+GFK+L EGQ V FE+++G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 KNVVKL 67 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/69 (60%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+ G VKWFNE+KGFGFI G DVF HFSAI +GFKTLAEGQ V+F + GQKG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PAAVNVTAI 69 P A N+ I Sbjct: 60 PQAENIVCI 68 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KGFGFI DG DVFVHFSAIQ +G+K+L EGQ VEF+I DG +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGD-DVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 VNVTAI 69 NV + Sbjct: 60 ANVVKL 65 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KG+GFI DG+ DVFVH+SAI+G+GFKTL EGQ VEFE+ + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 64 VNVTAI 69 V + Sbjct: 61 SKVRKV 66 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 46/61 (75%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWF+ KG+GFIT DG DVFVHFSAI+GNGFK+L +G VEFEI +G KGP A Sbjct: 26 GTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAAK 85 Query: 66 V 66 V Sbjct: 86 V 86 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ KG+GFIT +G DVFVH+SAI+ GFKTL EGQ VEFEIQ+G+KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 AHVKVV 65 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFNE KGFGFI+ DG KD F+HFS I GFKT+ EG+ VEF+I+DG+KGP A N Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 66 VTA 68 V + Sbjct: 62 VVS 64 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ +KG+GFI DG DVFVHFSAI+GNGFKTL EGQ VEF I +G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 ADVVKL 65 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFIT +GS DVFVHFSAIQ +GFK+L EGQ V F++++ +GP AVN Sbjct: 4 GTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAVN 62 Query: 66 VT 67 VT Sbjct: 63 VT 64 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI +G DVFVHFSAIQG+GFK+L EGQ V F++++GQ+GP A Sbjct: 3 QGTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 45/64 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFITP +G DVF HFS I GF++LAE Q V F+I +G KG A N Sbjct: 47 GTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQASN 106 Query: 66 VTAI 69 + I Sbjct: 107 IQPI 110 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 44/61 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFITP G +D+F HFSAI GFKTL EGQ V FE+ G KG A N Sbjct: 4 GTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQASN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 60 A + G VKWFN +KG+GFI P+ G KDVFVH SA+Q G ++L EGQ ++FEI+ Q G Sbjct: 31 AMLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGR 90 Query: 61 PAAVNVT 67 AAVN+T Sbjct: 91 AAAVNLT 97 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/65 (61%), Positives = 44/65 (67%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFITP D DVFVH+S IQ GFKTL E V+FEI G KGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 65 NVTAI 69 VT + Sbjct: 63 GVTLV 67 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/64 (60%), Positives = 46/64 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN++KGFGFI DG DVF H +AIQ +GF+TLAEGQ VEFE + G KG A N Sbjct: 4 GTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAEN 63 Query: 66 VTAI 69 V + Sbjct: 64 VRVV 67 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 44/61 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFITP DGSKD+F H+S I G+K+L E Q V FE+ G KGP+A N Sbjct: 4 GIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAKN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + KG VKWFN+ KG+GFITP G D+FVHF AI+GNGFK+L EGQ V FE GQKG Sbjct: 100 RQKGTVKWFNDEKGYGFITPESGP-DLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQ 158 Query: 63 AVNVTAI 69 A V + Sbjct: 159 ADKVQPV 165 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + KG VKWF++ KGFGFITP DG +D+FVH S I+ GF++LAEG+ VEFE++ G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 63 -AVNVT 67 AV+VT Sbjct: 68 KAVDVT 73 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFI +G +DVFVH S I +GFK+L EG V F+I+ GQKGPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 66 VTAI 69 VT + Sbjct: 63 VTVV 66 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+++ G VKWFN+ KGFGFITP DG D+FVH S+I+ GF++L EG+ VEF ++ G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 -PAAVNVTA 68 AV+VT Sbjct: 61 RTKAVDVTG 69 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWF+ KG+GFI +G DVFVHFSAIQ GFKTL EGQ+VEFEI +G +GP A N Sbjct: 3 GKVKWFSPEKGYGFIA-REGGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQAAN 61 Query: 66 V 66 V Sbjct: 62 V 62 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWFN+ KGFGFI +G DVFVHF AI G G +TL EGQ V FE+ GQKGP A Sbjct: 33 VSGIVKWFNDEKGFGFI-EREGGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 VNVTAI 69 NV+ + Sbjct: 92 ENVSIV 97 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 36/66 (54%), Positives = 46/66 (69%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWFN++KGFGFI P G +DVF HFSAI +GF+TL +G V FE+ DG KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 64 VNVTAI 69 N+ + Sbjct: 62 QNIAPL 67 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI +G DVFVHFSAI G+K+L EGQ+VEFE+ +G +GP A Sbjct: 3 QGTVKWFNAEKGFGFI-EVEGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 65 NVTAI 69 NV + Sbjct: 62 NVVKL 66 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 47/65 (72%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWF++ KG+GFIT D + DVFVHF+ IQ GFKTL +GQ VEF++ + KGP A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 Query: 65 NVTAI 69 NV + Sbjct: 64 NVRVL 68 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 47/64 (73%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN++KGFGFI P G D+F HFS I+ +GFK+L E Q V+FE+++G KG A N Sbjct: 21 GIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAAN 80 Query: 66 VTAI 69 +T + Sbjct: 81 ITPL 84 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + ++KG VKWFN KG+GFI+ G KDVFVH+S + GFK+L EG VEF++ +G KG Sbjct: 17 VLEMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKG 75 Query: 61 PAAVNVTAI 69 P A NVT + Sbjct: 76 PQATNVTKL 84 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KG+GFI+ +G DVFVHFSAI G+KTLAEGQ VEF++ ++G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGD-DVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 VNVTAI 69 VNV + Sbjct: 60 VNVRKV 65 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/61 (60%), Positives = 43/61 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+ KGFGFITP G D+FVHF AI+ +GFK+L EGQ V F + GQKG A Sbjct: 28 GTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQAAQ 87 Query: 66 V 66 V Sbjct: 88 V 88 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDGQKGP 61 I G VKWF++ KG+GF+T D DVFVHFSAI N GFKTL +GQ VEFE+ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 AAVNVTAI 69 A NV + Sbjct: 63 RAKNVRVL 70 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 KIKG VKWF+ KGFGF+ P DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKW 100 Query: 62 AAVNVT 67 A+NVT Sbjct: 101 KALNVT 106 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 ++KG VKWF+ +KGFGFITP DG +D+FVH S+++ +G+++L +G VEF + G G Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 62 AAVNVTA 68 AVNVTA Sbjct: 65 KAVNVTA 71 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFIT DG+ DVFVHFSAIQ +GFKTL EGQ V F+ + +GP A N Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 44/61 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFN +KGFGFI P DG +D+F H+S IQ G+++L GQ V FE+Q G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 48/65 (73%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ D P Sbjct: 4 RARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAPK 63 Query: 63 AVNVT 67 AVNVT Sbjct: 64 AVNVT 68 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++ G VKWFN++KGFGFITP G D+FVHF AIQG GFK+L EGQ V F GQKG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESGP-DLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AVNVTAI 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFN KG+GFIT DG KDVFVH+S+I GFKTL EGQ V +++ + +G A N Sbjct: 24 GKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQANN 82 Query: 66 VTAI 69 VT + Sbjct: 83 VTVV 86 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN++KGFGFITP G+ D+FVHF +IQG GFK+L EGQ V F + +GQKG A Sbjct: 7 GTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADE 65 Query: 66 VTAI 69 V + Sbjct: 66 VQVV 69 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 3/64 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G+VKWFN KG+GFI +GS+DVF HFSAIQ GFK L EG VEFEI+ GQ KGP A Sbjct: 4 GKVKWFNAEKGYGFIE-TEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 VNVT 67 N+ Sbjct: 63 RNIV 66 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 50/65 (76%), Gaps = 2/65 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G VK+FN +KGFGFITP +G KDVFVH SA++ +G ++L +GQ V F+++ + KGP A Sbjct: 5 GTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPKA 64 Query: 64 VNVTA 68 VN++A Sbjct: 65 VNLSA 69 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VK+FN KGFGFI DG DVFVHFS IQ +GFKTL EGQ V +++Q+ +G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGV-DVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 64 VNVTAI 69 +NV AI Sbjct: 85 INVVAI 90 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ--GNGFKTLAEGQNVEFEIQDGQKGP 61 + G VKWFNE KG+GFI +G KDVFVHF + G G +L+EGQ V FE+ +GQKGP Sbjct: 5 LDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGP 64 Query: 62 AAVNVTAI 69 A NVT + Sbjct: 65 QAENVTPL 72 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 41/61 (67%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFI G DVF HFS I +G++ L EGQ V FE+ GQKGP AVN Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/45 (82%), Positives = 39/45 (86%) Query: 15 KGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 KGFGFITPADGSKDVFVHFSAIQ N FKTL EGQ VEF I++G K Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWF+ KGFGFI P DG +D+FVH ++I+ +GF+TL+EG+ VEF + G+ G Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 63 -AVNVTAI 69 AV VTA+ Sbjct: 66 KAVEVTAV 73 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+ KG+GFITP G+ D+FVHF AI+GNGFK+L EGQ V F GQKG A Sbjct: 7 GTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQADQ 65 Query: 66 VTAI 69 V + Sbjct: 66 VQVV 69 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 44/63 (69%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KG+GFI +G +D+F H+SAI +G+KTL GQ V FEI G KG A+N Sbjct: 45 GTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAIN 104 Query: 66 VTA 68 + A Sbjct: 105 IVA 107 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/58 (67%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWFN+ KGFGFITP G D+FVHF AIQGNGFK+L EGQ V F GQKG A Sbjct: 7 GTVKWFNDEKGFGFITPESGP-DLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQA 63 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN SKGFGFI +G+ DVFVHFSAI+ G+K L EG V F++ G KGPAA Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVTAI 69 NV + Sbjct: 128 NVELL 132 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 45/63 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN++KGFGFIT G +DVF H +AI +GF+TL EGQ V+F++ G KG A N Sbjct: 37 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQN 96 Query: 66 VTA 68 V A Sbjct: 97 VRA 99 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K G VKWFN +KG+GFI + G +DVFVHFSAIQ +G+KTL EG+ VEFE Q G KG Sbjct: 21 KENGVVKWFNGAKGYGFIQRSTG-EDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 63 AVNV 66 A NV Sbjct: 80 AANV 83 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN++KG+GFI +G+ DVFVH+ AI+G+G ++LAEGQ VEF + GQKG A + Sbjct: 74 GTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQAED 132 Query: 66 VTAI 69 V + Sbjct: 133 VAGL 136 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ +G VKWFN+SKGFGFI D +D+FVHF AIQG+G+++L +G+ VEF + +G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQR-DSGEDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 AAVNVTAI 69 A V + Sbjct: 62 QAEEVRRV 69 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVTAI 69 + + Sbjct: 63 VIVPV 67 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +++G VKWFNE KG+GFI G KDVFVH SAI G G KTL EGQ V E+ G KG Sbjct: 3 TQVEGTVKWFNEEKGYGFI-EQKGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 AAVNVTAI 69 A +VT + Sbjct: 62 QAEDVTPL 69 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PAAV 64 G VKWFN +KGFGFI P G+KDVFVH SA++ +G LA+ Q V F+I+ G+ G AAV Sbjct: 56 GTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAAV 115 Query: 65 NVTAI 69 N+ + Sbjct: 116 NLALV 120 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 31/58 (53%), Positives = 42/58 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWFN +KGFGFI P DG KDVFVH SA++ G K L++ Q + +E+Q G+ G ++ Sbjct: 19 GTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSS 76 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA-AV 64 G V+WF++ KGFGFITP +G +D+FVH S+I+ +GF++L EG+ VEF+I G+ G AV Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKAV 67 Query: 65 NVT 67 +VT Sbjct: 68 DVT 70 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 GQVK+FN KGFGFI P DG D+FVH SA+Q +G LA+ Q V +E + + KGP A Sbjct: 17 GQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPKA 76 Query: 64 VNVT 67 VN+T Sbjct: 77 VNIT 80 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+ KGFGF++ D DVFVH+ AI G +TL EGQ V F + +GQKG A N Sbjct: 8 GTVKWFNDEKGFGFLS-RDNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAAN 66 Query: 66 VTAI 69 VT + Sbjct: 67 VTPL 70 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 45/63 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+ KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE Q +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 VTA 68 V++ Sbjct: 101 VSS 103 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VK+FN KG+GFIT +G +D+FVH+SAI +G+KTL EGQ V FE+ +G +G A N Sbjct: 4 GKVKFFNAEKGYGFIT-IEGGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAAN 62 Query: 66 VTAI 69 V I Sbjct: 63 VRGI 66 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQDGQKGPAA 63 KG+VKWFN +KGFGFI+ D DVFVH++AI+ NG ++ L E Q VEFEI +G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 CNVKKL 67 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQ-DGQKGP 61 + KG VKWF+ KGFGFITP+DG D+FVH S+I+ GF++LA ++VEF+++ D P Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73 Query: 62 AAVNVT 67 A+ V+ Sbjct: 74 KAIEVS 79 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 72.0 bits (175), Expect = 5e-12, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN SKGFGFI+ D DVFVHF AI+G G + L EGQ VEF I KG A + Sbjct: 177 GTVKWFNTSKGFGFIS-RDSGDDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQAED 235 Query: 66 VTAI 69 V + Sbjct: 236 VVPV 239 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 39/55 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG Sbjct: 27 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKG 81 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA- 62 + G KWF+ +KGFGFITP DGS+D+FVH I+ GF++LA+ + VE+EI+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 63 AVNVT 67 AVNV+ Sbjct: 71 AVNVS 75 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 39/62 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFI G DVF H+S I GF+ L EGQ V F+I GQKGP A N Sbjct: 4 GVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAEN 63 Query: 66 VT 67 + Sbjct: 64 IV 65 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG A Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHASL 63 Query: 66 VTAI 69 + + Sbjct: 64 IVPL 67 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGS-KDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 I+G+VKWFN +KGFGFI S +D+FVHFSAI+ +G+KTL GQ V FE+ G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 63 AVNVTA 68 A+ + + Sbjct: 62 AIKINS 67 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 40/61 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G V+WFN +GFGF+ PADGS D+FVH S I G+G + L EGQ V F + + G A + Sbjct: 56 GTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQARD 115 Query: 66 V 66 V Sbjct: 116 V 116 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G KWFN KGFGF+TP DG KDVFVH I+ +GF++L E ++VEF + KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 65 NVTA 68 VT Sbjct: 132 LVTG 135 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGPAA 63 G VKWFN +KGFGFI P G DVFVH SA+Q G TL EGQ V +EI QD + G ++ Sbjct: 45 GTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRRSGRSS 103 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 43/68 (63%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A + VKWFN SKGFGF+ P+DGS D F+H SA++ G +AEG + ++ GQ+GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 AAVNVTAI 69 V V + Sbjct: 107 QVVMVHEV 114 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 39/66 (59%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G VK+F+ KGFGF+ G KDVFVH A++ +G KTL GQ V G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 VNVTAI 69 V I Sbjct: 195 DTVAII 200 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGP-AA 63 G VKWFNE+KG+GFI P +G KDVFVH SA++ G + L EGQ + +E+ D + G AA Sbjct: 4 GTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDAA 63 Query: 64 VNVTAI 69 N+ A+ Sbjct: 64 GNLQAV 69 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G+V WFN SKG+GFITP DGS ++FVH S+I G+++L G VEF I G G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 A-AVNVTA 68 AVNVTA Sbjct: 69 TKAVNVTA 76 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 I+G VKWFN G+GFI AD D+FVH +A+ N ++L +G+ VEF++ +GQK Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPAAVNVT 67 GP A NVT Sbjct: 118 GPEAANVT 125 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGPAAV 64 G VKWFN +KGFGFI P DG+ DVFVH SA++ G ++L EGQ V ++I +D + G ++ Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGKSSA 63 Query: 65 N 65 + Sbjct: 64 D 64 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKT-LAEGQNVEFEIQDGQKGPAA 63 +G+VKWFN KG+GFI P DGSKDVFVH + + G G+ L EG+ V +E++ KG +A Sbjct: 4 RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSA 63 Query: 64 VNVTAI 69 +NV + Sbjct: 64 MNVERL 69 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADG-SKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KIKG +WFN+ KGFGF+ D S+D+F H + I+ GF++L EG+ VEF + G+KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 AAVNV 66 A+ + Sbjct: 72 QAIEI 76 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G+VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ+VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAADVIA 68 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 42/63 (66%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWFN +KG+GFI G +D+F H+SAIQ G++TL GQ V F I G KG A Sbjct: 8 LSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLHA 67 Query: 64 VNV 66 ++ Sbjct: 68 TDI 70 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSA-IQGNGFKTLAEGQNVEFEIQDGQK 59 MA +G VKWF+ KG+GFI +G D+FVH+S I FKTL GQ VEFE+ +G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPAAVNVTAI 69 G A NV + Sbjct: 61 GLHARNVVPL 70 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 214 EMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGRE 273 Query: 63 AVNVT 67 A ++T Sbjct: 274 ASSIT 278 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 35/62 (56%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP V Sbjct: 82 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAVN 141 Query: 68 AI 69 ++ Sbjct: 142 SV 143 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 175 EMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGRE 234 Query: 63 AVNVT 67 A ++T Sbjct: 235 AQSIT 239 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 37/62 (59%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP N+T Sbjct: 66 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNIT 125 Query: 68 AI 69 ++ Sbjct: 126 SV 127 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 43/62 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN +KG+GFI S D+F HFS++Q +G+KTL GQ V F+ + KG A+ Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NV 66 N+ Sbjct: 63 NI 64 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 29/54 (53%), Positives = 38/54 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DGS DVFVH SA++ G + L +GQ + +E+ +K Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 39/58 (67%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWFN +KG+GF+ P DG KDVFVH SA++ G+ +L EG V +E+ + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQA 113 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFI DG +DVFVH+S I +G++ L EG+ VE+E+Q+G KG A Sbjct: 4 GAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAAQ 62 Query: 66 VTA 68 V + Sbjct: 63 VKS 65 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KGFGFI G DVFVHF+AIQ N K L EGQ V+F++++G KG A Sbjct: 4 GTVKWFNSEKGFGFIE-VPGENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQAA 62 Query: 65 NVTAI 69 NV + Sbjct: 63 NVVKL 67 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFI G DVFVH+SAI GF++L E Q V F++ G+ GP A N Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAEN 62 Query: 66 VT 67 V+ Sbjct: 63 VS 64 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDGQKG 60 K +G +WF++ KG+GFI ADG KD+FVH+S+IQ G KTL E VEF +++G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PAAVNVTAI 69 AV+V + Sbjct: 64 AQAVDVVVV 72 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGPAAV 64 G VKWFN +KGFGFI P DG +DVFVH SA+ G L EG VE+E+ QD + G A Sbjct: 59 GTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGKLAA 118 Query: 65 NVTAI 69 + Sbjct: 119 TSIVV 123 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 39/59 (66%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 M G VKWFN +KGFGFI P G +D+FVH SA++ G L EGQ V+F+++ ++ Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF-KTLAEGQNVEFEIQDGQK 59 MA G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+++ F+I + +K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPAAVNV 66 GPAA+NV Sbjct: 60 GPAAINV 66 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN SKGFGFIT DG +++FVHF +I G G + L +GQ V F + KGP A Sbjct: 82 EGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQAE 140 Query: 65 NVTAI 69 NV + Sbjct: 141 NVEPL 145 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQG-NGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWF+ KG+GFI D +DVFVH+S IQ + FKTL Q+V FE+ DG KG A+ V Sbjct: 6 VKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALEV 65 Query: 67 TAI 69 + Sbjct: 66 APL 68 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 65.5 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AA 63 +G KWF+ KGFGFIT DG+ D+FVH + I+ GF+ LAEG++VEF +Q G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 Query: 64 VNVTA 68 V+VT Sbjct: 148 VSVTG 152 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAI-QGNGFKTLAEGQNVEFEIQDGQKGPAA 63 K +VKWF+ KG+GFI DG +D+FVHFSAI FK L + VEFEI QKG A Sbjct: 4 KSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQA 63 Query: 64 VNVTAI 69 NV I Sbjct: 64 KNVCEI 69 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 59 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 118 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 119 KGAEAANVTG 128 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 6/60 (10%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL------AEGQNVEFEIQ 55 A+ +G+VKWFN +KGFG+ITP DG DVFVH SA++ GF+ +G +VEF+++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVE 68 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 43/61 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KG+GFI +D+F+H+S+I +G+KTL GQ+V F+ G++G AV+ Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G VK+FN KGFGFI P +G D+FVH SA+Q +G L+E Q V F+ + + KGP A Sbjct: 5 GIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPKA 64 Query: 64 VNV 66 VN+ Sbjct: 65 VNL 67 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+V WFN+ KGFGFIT DG DVFVH++ I +GF++L G+ V + + D + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AVNV 66 AV+V Sbjct: 61 AVDV 64 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 42/63 (66%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 I G+VKWFN +K FGFI +G KDVFVH SA+ G L EGQ+V F+++D +A Sbjct: 5 IVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKISA 64 Query: 64 VNV 66 VN+ Sbjct: 65 VNL 67 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQG-NGFKTLAEGQNVEFEIQDGQKGPAA 63 KG++K+F+ S+GFGFI P DGS+DVF+H + I G + L EGQ +E+E + +KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 64 VNV 66 +N Sbjct: 63 LNA 65 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 39/54 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DG +DVFVH +A++ +G L EG V +E+++ ++ Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 37/52 (71%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 VKWFN +KGFGFI P +G D+FVH SA++ G + L EGQ V +E++ ++ Sbjct: 116 VKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++ VKWFN KGFGF+ PADG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 VNVTAI 69 + + + Sbjct: 103 IRLVDV 108 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 38/58 (65%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 +++G VKWF + KGFGF+T DG KDVFVH S ++ G ++L G+ V + + KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKG 189 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQ-DGQKGPAAV 64 G KWFN KG+GFI P +G D+FVH +AI+ GF++LAEG+ VEF+++ D A Sbjct: 26 GTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRKKAR 85 Query: 65 NVTA 68 NVT Sbjct: 86 NVTG 89 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 40/64 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KGFGFI+ D+F H+S I+ +G+++L GQ V+FE+ KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VTAI 69 + I Sbjct: 64 IIPI 67 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G VKWFN KGFGFI +G +D+FVHF A+ L EGQ VE+ I G+KGP Sbjct: 76 AREVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGP 134 Query: 62 AAVNVTAI 69 A V + Sbjct: 135 QAEQVVIL 142 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE-IQDGQKG-PAA 63 G VKWFN KGFGFI P DG D FVH SA++ G L EGQ V ++ + D + G +A Sbjct: 51 GTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSSA 110 Query: 64 VNVTAI 69 N+T + Sbjct: 111 SNLTLV 116 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +KG V WFN+ KGFGFI G +D++VH+S + +GFKTL G+ V FE+ D P A Sbjct: 3 LKGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 VNVTAI 69 V I Sbjct: 62 TAVRII 67 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDGQKGPA 62 +G V+WF+ +GFGF+ DG+ D+FVH S I GN G ++L EGQ+VEFEI +G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AVNV 66 A V Sbjct: 63 ARRV 66 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G V W+ +KG+GF+TP G ++F H SAI G G +AEGQ V F + +G+KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQA 137 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 V W++ KGFGF+TP G D FVH ++ G G L EG V F + G +GP A +V Sbjct: 165 VSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDVR 223 Query: 68 AI 69 + Sbjct: 224 VV 225 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V ++ +GFGFITP G D+FVH S ++ + L EG V F+++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/45 (68%), Positives = 34/45 (75%) Query: 15 KGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 KGFGFIT +G DVFVHF AI GFKTLAEGQ V FE++ GQK Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 7/72 (9%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAE------GQNVEFEIQ 55 A + QV WFN +G+G++ P DGS+DVFVH S +Q +GF+++ E G +EFE+ Sbjct: 38 ASRREQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELD 97 Query: 56 DGQKGPAAVNVT 67 D ++ A NVT Sbjct: 98 DDERR-RAKNVT 108 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 210 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 269 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 270 KGAEAANVTG 279 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 44/68 (64%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KG+VKWF++ G+GFI+P DG D++VH +AI K+L GQ+VEF + G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAEDVIA 68 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+ KWF+ +K +GF+TP DGS DVFVH I+ G+++L + VE++ Q +KG A Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 65 NVTAI 69 VT + Sbjct: 124 TVTGV 128 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 38/61 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G V WF+ KGFGFITP D S VFV F AI+ G++TL G V + ++ + GP AV Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 66 V 66 V Sbjct: 114 V 114 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI D ++FVHF AI+G G + L +GQ V F + + KG A Sbjct: 114 EGTVKWFNVKKGFGFIV-RDSGDEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NVTAI 69 NV+ + Sbjct: 173 NVSIL 177 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 90 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 149 Query: 59 KGPAAVNVT 67 KG A NVT Sbjct: 150 KGAEAANVT 158 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVT 67 KG A VT Sbjct: 85 KGDEASEVT 93 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 24 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEGE 83 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 84 KGAEAANVTG 93 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G+ Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 76 KGREAANVTG 85 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M ++ G KWFN KG+GFIT +G +DVFVH S I +GF++L E + VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59 Query: 61 PAAVNVT 67 A++VT Sbjct: 60 KKAIHVT 66 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 3/64 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWF+ ++G+GF+ P +G DVF+H S + + L EG +EFEI++ +KG AVN Sbjct: 4 GTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPD---EDLEEGDRLEFEIEETEKGLNAVN 60 Query: 66 VTAI 69 + A+ Sbjct: 61 IEAL 64 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK+FNESKG+GFI D ++D+FVH + + G T+ E V+FE+ DG+KG AV Sbjct: 4 GVVKFFNESKGYGFIVEDDTNRDIFVHITGLNG---ITIREKDRVQFEVVDGKKGLNAVK 60 Query: 66 VTAI 69 V I Sbjct: 61 VKKI 64 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 37/61 (60%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKW+N KGFGFI G KDVFVH + + +G L+EGQ V ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 V 66 + Sbjct: 233 I 233 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 36/57 (63%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 I+ VKWFN KGFGF+ +DGS DVF+H A++ G +++ G + + GQKG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKG 122 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 3/61 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKW++ KG+GFI DG D+FVH SAI G+ L EG VEF++ KGP A + Sbjct: 4 GTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAEH 60 Query: 66 V 66 V Sbjct: 61 V 61 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G+VKWFN +G+GFI D +DVFVH +AIQ N +++ + + VEF++ G Sbjct: 28 KVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGP 87 Query: 59 KGPAAVNVT 67 KG A NVT Sbjct: 88 KGLEAANVT 96 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 153 KGAEATNVTG 162 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G+KG Sbjct: 133 ECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLE 192 Query: 63 AVNVTAI 69 +++ + Sbjct: 193 VLSIRLV 199 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + +V WFN KGFGF+ DG+ + ++ ++ +G + + EG ++ I++ +G Sbjct: 43 VNAEVMWFNAGKGFGFVKLLDGT-EAYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQV 101 Query: 64 VNVTAI 69 V I Sbjct: 102 TKVREI 107 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 61.2 bits (147), Expect = 8e-09, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N ++ +G+ VEF++ +G+ Sbjct: 87 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGE 146 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 147 KGAEAANVTG 156 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVT 67 KG A VT Sbjct: 85 KGDEASEVT 93 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 40/61 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWF+ +GFGFI P +G +++F H I G+KTL Q V ++++ G+ G AVN Sbjct: 5 GRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAVN 64 Query: 66 V 66 + Sbjct: 65 I 65 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 +++ G VKWFN G+GFI D +DVFVH +AI N +++ +G+ VEF++ +G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 91 EKGNEAANVTG 101 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 37/53 (69%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQ 55 K KG V WFN +KGFGF+T DG DVFVH S I GF++L + + VEFE++ Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELE 95 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 63 GSEAANVTG 71 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G VK+F KGFGFITP +G DVFVH SA++ +G TL GQ + FE + + KGP A Sbjct: 124 GTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKGPKA 183 Query: 64 VNV 66 V + Sbjct: 184 VEL 186 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VK+FN+SKGFGFIT KD FVH S + + EG VEFE+++G KG AV Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAV 58 Query: 65 NVTAI 69 NV + Sbjct: 59 NVRVL 63 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Query: 6 GQVKWFNESKGFGFITPADGSK---DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G KWFN +G+GFITP S+ DVFVH S+I GF++L EG V+F + +KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AVNV 66 AV V Sbjct: 89 AVKV 92 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 ++KG VK F+ + GF FITP DGS+D+F+H S+++ +G+++L + +E + G Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 62 AAVNVTA 68 AV+VTA Sbjct: 65 KAVDVTA 71 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSK-DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G V WF+ KGFGFI PA+G + VFV FS+I+ +G++TL EGQ V F G+ AV Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGRAEAVAV 76 Query: 65 NVTA 68 A Sbjct: 77 RPLA 80 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+KG VKWFN+SKG GFI D DVFVH+ +I G KTL +GQ V F I + G Sbjct: 4 KLKGTVKWFNDSKGVGFI-QRDNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AVNV 66 A V Sbjct: 63 ASEV 66 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 36/55 (65%), Gaps = 3/55 (5%) Query: 12 NESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 N KGFGF P G VFVHFS I G GFKTL EGQ++E+E+ GQKG A N Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAENA 76 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G++ F+ S+GFGFI P DG DVFVH + I G L +G+ EF++ +G +GP A+N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRGPKAIN 64 Query: 66 VTAI 69 ++A+ Sbjct: 65 LSAV 68 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN---GFKTLAEGQNVEFEIQDGQK 59 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+K Sbjct: 62 KVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGEK 121 Query: 60 GPAAVNVT 67 G A NVT Sbjct: 122 GNEAANVT 129 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 K G VK+FN KGFGFI DG D FVH SA++ G +L EG + FE++ ++G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 62 AAVNVTAI 69 AAVN+ + Sbjct: 294 AAVNLAQL 301 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 38/61 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK+FN KGFGF+ DG +DVFVH SA++ G LAEGQ + F + D +A N Sbjct: 138 GVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSATN 197 Query: 66 V 66 + Sbjct: 198 L 198 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN----GFKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 87 KVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGE 146 Query: 59 KGPAAVNVT 67 KG A NVT Sbjct: 147 KGNEAANVT 155 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G VK+FN KGFGFI DG D FVH SA++ G L EG ++FE++ ++G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 62 AAVNV 66 AAVN+ Sbjct: 144 AAVNL 148 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I +G Sbjct: 20 KVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGS 79 Query: 59 KGPAAVNVT 67 KG A +VT Sbjct: 80 KGLEAASVT 88 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AAV 64 G VK+FN KG+GFI DGS D FVH +A+Q G TL + Q V +E++ G+ G +A+ Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 65 NV 66 N+ Sbjct: 86 NL 87 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQ-DGQKGP 61 + KG VKWF+ KGFGFITP DG D+FVH S+I+ GF++LA + VEFE++ D P Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNRP 69 Query: 62 AAVNVTA 68 A++V+ Sbjct: 70 KAIDVSG 76 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 37/67 (55%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I G VKWF+ KG+GFI P +G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AVNVTAI 69 A+ V + Sbjct: 97 AIRVVDV 103 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 33/53 (62%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ + +G KG Sbjct: 138 VKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKG 190 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 5/71 (7%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 + G VKWFN G+GF+ D +DVF+H +AI N +++ +G+NVEF++ +G Sbjct: 24 SHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEG 83 Query: 58 QKG-PAAVNVT 67 +KG P A NVT Sbjct: 84 EKGLPEAANVT 94 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFK----TLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +D+FVH SAI N K ++ +G+ VEF++ +G+ Sbjct: 27 KVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGE 86 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 87 KGHEAANVTG 96 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G +KWFN +KGFGFI DG+ +VFVH+ ++G +++ +GQ V + ++ +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVTAI 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAI----QGNGFKTLAEGQNVEFEIQDGQK 59 I G+VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I G K Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 60 GPAAVNVTAI 69 G A NV+AI Sbjct: 89 GNEAANVSAI 98 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MA + G+V F+E +G+GFI P DGS DVFVH + + G+ + L G VE++ + ++G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PAAVNV 66 P AV V Sbjct: 64 PKAVLV 69 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 39/64 (60%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK + + +G+G+ITP G +DVFVHF+ I GFK L +G+ V + + G K P A Sbjct: 4 GIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAAQ 63 Query: 66 VTAI 69 V I Sbjct: 64 VQPI 67 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 40/64 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+ KGFGFI P +G DVFVH + ++ +G TL E V++++ + AA N Sbjct: 10 GTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAGN 69 Query: 66 VTAI 69 + + Sbjct: 70 IQLL 73 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN +KGFGFI D +++FVHF A+Q G ++L G V F+ + +G A Sbjct: 12 RGEVKWFNPNKGFGFIL-TDSGEELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQAD 70 Query: 65 NV 66 NV Sbjct: 71 NV 72 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG +KWFN +KGFGFIT DG+ +VFVHF ++ + + GQ V + + + ++GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGN-EVFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 65 NVTAI 69 +V+ + Sbjct: 119 DVSPL 123 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 ++KG VK F+ + GFGFITP D +D+F+H S+++ + +++L + +E + G G Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 62 AAVNVTAI 69 AV+VTA+ Sbjct: 65 KAVDVTAL 72 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 +I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 35 RIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAGA 94 Query: 59 KGPAAVNVTAI 69 KG A NVT + Sbjct: 95 KGTEAANVTGL 105 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITP-ADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 K+ G +KWF+ +KG+GFI P G D+ +H ++++ +GF+T EG + E++ G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 AAVNVTAI 69 V ++ Sbjct: 85 QCFRVLSM 92 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFITP-ADGS---KDVFVHFSAIQGNG-FKTLAEGQNVEFEIQ 55 M+K++G VKWF+ KG+GF+ P +D S +++FVH ++IQ G ++TL E +EF+++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 -DGQKGP-AAVNVTA 68 + + G A+NVTA Sbjct: 61 KEAESGKFKAINVTA 75 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VK+FN +KGFGFI D ++D+FVH S + + E V+FE++ G+KG AV Sbjct: 3 EGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAV 58 Query: 65 NVTAI 69 NV I Sbjct: 59 NVEVI 63 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN----GFKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 23 KVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGE 82 Query: 59 KGPAAVNVT 67 KG A NVT Sbjct: 83 KGHEAANVT 91 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 57.8 bits (138), Expect = 9e-08, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKT----LAEGQNVEFEIQDGQ 58 ++ G V WF E KG+GFI+ D +DVFVH +AI G T + +G+ VEF++ G+ Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPAAVNVTA 68 G A NVT Sbjct: 127 WGTEAANVTG 136 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Query: 6 GQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGFI+ P D + DVFVH S + GF++L EG+ +EF + Sbjct: 6 GVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKSS 65 Query: 59 KGPAAVNVT 67 KG AV V+ Sbjct: 66 KGLEAVRVS 74 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKW++ KGFGF++ DG +DV+V SA+ G + L GQ VEF + G++GP A++ Sbjct: 17 GKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQALS 74 Query: 66 VTAI 69 + I Sbjct: 75 LKLI 78 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 41/67 (61%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG +V IQ +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AVNVTAI 69 AV V I Sbjct: 70 AVEVLEI 76 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + +VKWF+++KGFGF DVF+H ++ +GF LA G+ + + DG++G A Sbjct: 104 LPARVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMA 163 Query: 64 VNVTA 68 + + Sbjct: 164 AQILS 168 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKW++ KGFGF+T DG +VFVH SA+ +G +L GQ VEF + +G++G A++ Sbjct: 8 GKVKWYDAGKGFGFLTRDDGG-EVFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQALS 65 Query: 66 VTAI 69 V + Sbjct: 66 VRTL 69 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKW++ KGFGF+T DG +VF+H SA+ G TL GQ VEF I +G+KG A+ Sbjct: 4 GKVKWYDAGKGFGFLTKDDGG-EVFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQALQ 61 Query: 66 VTAI 69 V + Sbjct: 62 VRLL 65 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQKG 60 +G VK+F KGFGFI P DG +DVFVH++ I+ +G FK L EG VE+ KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 61 PAAVNVTAI 69 A +V + Sbjct: 63 TQAKDVVKL 71 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 89 Query: 60 GPAAVNVT 67 G A NVT Sbjct: 90 GSEAANVT 97 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSK-DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWF+ ++GFGFI DG + DV VHFS ++ +G +TL EG + E+ +G Sbjct: 34 VVGAVKWFDATRGFGFIA-TDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQ 92 Query: 63 AVNVTAI 69 A + AI Sbjct: 93 ARRILAI 99 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 34/59 (57%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN KG+GF+ ++D+F+H ++ G L ++ I +G+KGP AV + Sbjct: 137 VKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 60 GPAAVNVT 67 G A NVT Sbjct: 81 GSEAANVT 88 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFIT-PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +KG+VK F+E KG+GFIT P +G ++FVH+S I+G + L + V I GQKGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 63 AVNVTAI 69 A +V + Sbjct: 60 AAHVRVL 66 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAI---QGNGFKTLAEGQNVEFEIQDGQKGPA 62 G+VKW+N KG+GFI D +DVFVH SAI Q K+L E ++V F++ G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AVNVT 67 A+NVT Sbjct: 65 AMNVT 69 >UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodococcus RepID=Q9RBP7_9NOCA Length = 57 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +W+N KGFG +TP DGSKD FVHF+A++ + +++ + + KGPAA Sbjct: 2 ARWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSISGRRKHRKRLNTPAKGPAA 57 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN +KGFGFI +G ++FVH +I G G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGD-EIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVTAI 69 V A+ Sbjct: 184 EVEAL 188 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSK--DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 + +I G +KWF+ SKG+GF+TP D K D+ +H S +Q +GF+T EG V ++ + Sbjct: 11 IVEITGIIKWFDSSKGYGFVTP-DFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTK 69 Query: 59 KGPAAVNVTAI 69 +G + V +I Sbjct: 70 RGLKCIQVKSI 80 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + VKWFN KGFGF++ G++D+F+H ++ G L GQ V G+KG Sbjct: 107 RAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKG 162 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 5/70 (7%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDGQ 58 ++G+VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ +G+ Sbjct: 66 LQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGK 125 Query: 59 KGPAAVNVTA 68 GP A NVT Sbjct: 126 NGPEAANVTG 135 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A+ V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 67 TAI 69 + Sbjct: 195 RPL 197 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 35/60 (58%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G++KWF+ KG+GF+ +G DV +H +A++ +G EG V E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I+G VKWF+++KG+GFIT G +DV +H S ++ +G T EG V E + +KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AVNV 66 A + Sbjct: 73 ATRI 76 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 33/59 (55%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQ + G KG A + Sbjct: 109 VKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KI G VK + KGFGFI G DVFVHFSAIQ + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PAAVNVTAI 69 P A V + Sbjct: 60 PQAAAVEVL 68 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 V+WF+ G+G I D ++VF+ F+AI G G++T+A V FE+ G GP A NV Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEF---EIQDGQKGP 61 +G+VKWF+ KGFGFI G ++V VH++ I+G GF+ L EG VE+ + +DG++ Sbjct: 3 RGRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEYAAVKTEDGRRRA 61 Query: 62 AAVNV 66 V + Sbjct: 62 FGVRM 66 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKW++ KGFGF++ +G +DV+V SA+ G + L GQ VEF I G++GP A++ Sbjct: 54 GKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQALS 111 Query: 66 VTAI 69 + + Sbjct: 112 LKLL 115 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG---FKTLAEGQNVEFEIQDGQKG 60 +KG+VKWFN++KG+GFI D +K+ FVH+ +I N K L + + V F++ + KG Sbjct: 5 MKGKVKWFNKNKGYGFII-TDDNKEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PAAVNVTAI 69 A+N+ + Sbjct: 64 IQAINIIRV 72 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK+FNE+KGFGFI D+FVH SA+ + E V F I+ G+KG AVN Sbjct: 139 GTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAVN 194 Query: 66 VTAI 69 + + Sbjct: 195 IKLL 198 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ +G Sbjct: 58 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEGG 116 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 117 KGAEAANVTG 126 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G V+ F++ KG+GFI A G K VF H++ IQ +KTL G+ V+ + DG KG AV Sbjct: 4 GTVESFDKEKGYGFIETASGDK-VFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLIAVK 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 34/55 (61%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 G KWFN SKG+GF+ +D+FVH S + GF++L EG+ V + IQ+ G Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQDGQKGP-A 62 +G+V F++ KGFGFI P DG +D+FVH SAI+ +G +++LAE VEF + Sbjct: 15 RGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNKYQ 74 Query: 63 AVNVTA 68 AV+VTA Sbjct: 75 AVDVTA 80 >UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF18_9PLAN Length = 65 Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G +K E KGFGFI DG +D+F H S++ G F L EGQ VEFE + +G AV Sbjct: 4 GTIKKITE-KGFGFIN--DGQQDIFFHLSSLDGVTFDQLVEGQTVEFETEKSDRGLRAVR 60 Query: 66 VTA 68 VT Sbjct: 61 VTT 63 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWF+ KG+GF+ G +D+FVH S ++G+ +L +G VE+E+ ++GP A Sbjct: 135 QGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPNAR 192 Query: 65 NVTAI 69 V + Sbjct: 193 RVRVL 197 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFE-IQDGQ 58 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF+ I+ + Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAK 89 Query: 59 KGPAAVNVT 67 KG A NVT Sbjct: 90 KGSEAANVT 98 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQKGPAAV 64 G+V F++ KGFGFI P G KD+FVH SAI+ + G++TL E VEF I AV Sbjct: 16 GRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKYQAV 75 Query: 65 NVTA 68 +VTA Sbjct: 76 DVTA 79 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFIT-PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 I+ +K ++ +KG+G+IT P DG DV+ H AI+G + +GQ VE I GQ+GP Sbjct: 2 IQATIKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 63 AVNVTAI 69 A +VT I Sbjct: 60 AAHVTII 66 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G +KWF+ SKG+GF+ P +G DV +H + ++ +G++T EG + E KG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PAAVNVTAI 69 A + ++ Sbjct: 126 YQAFRIVSM 134 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + QVKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G KG A Sbjct: 162 RAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAA 221 Query: 65 NV 66 + Sbjct: 222 EI 223 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 7/70 (10%) Query: 6 GQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 32 GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSS 91 Query: 59 KGPAAVNVTA 68 KG ++ VT Sbjct: 92 KGLESIRVTG 101 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G VKWF+ +KGFGF+ +G D+ +H + ++ G ++A+G +E + Q+G Sbjct: 9 AVTTGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGV 68 Query: 62 AAVNVTAI 69 A V AI Sbjct: 69 QATQVHAI 76 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 35/63 (55%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 +VKWF++SKGFGF S D+F+H ++ +G L G+ + + G++G A Sbjct: 106 ARVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAE 165 Query: 66 VTA 68 V A Sbjct: 166 VHA 168 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 +++ VKWFN +KGFGF+ +DG D F+H S +Q G+ L EG + ++ GQKG Sbjct: 2 LSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKG 61 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 37/61 (60%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I G VK+F+ KGFGF+ P G KDV+V +Q G L +GQ V I+ G+KGP Sbjct: 144 EIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGPM 203 Query: 63 A 63 A Sbjct: 204 A 204 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKW++ S G G I+P DG D++V+ + I K L EGQ VEF G++ A + Sbjct: 6 GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRSQMAED 65 Query: 66 VTA 68 V A Sbjct: 66 VIA 68 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + +VKWF+++KGFGF S+DVFVH ++ +GF L G+ V ++ DG +G A Sbjct: 113 VAARVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMA 172 Query: 64 VNV 66 V Sbjct: 173 AEV 175 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWF+ +KGFGF+ +G D+ +H + ++ G ++AEG V Q +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 64 VNVTAI 69 V + AI Sbjct: 82 VEIIAI 87 >UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepID=Q5L9T7_BACFN Length = 69 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 +A + G++++FN +KG+GF+ AD + F H S+ T+AEG V FEI+ G +G Sbjct: 3 VAPLMGRIEYFNAAKGYGFVKDADNGEKYFFHISSAPA----TIAEGDRVTFEIERGMRG 58 Query: 61 PAAVNVTAI 69 AV ++ + Sbjct: 59 MNAVRISIV 67 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 7/70 (10%) Query: 6 GQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 58 GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSS 117 Query: 59 KGPAAVNVTA 68 KG ++ VT Sbjct: 118 KGLESIRVTG 127 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+V+W++ KG+GFI DG KDVF+ +A+ K+L +G VEF + +G+KGP A+ Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 VTAI 69 + I Sbjct: 62 LNVI 65 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 8/71 (11%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVH--------FSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN KG+GFITP +G DVFVH S + +GF++L G+ V F I+ Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 QKGPAAVNVTA 68 +G A V + Sbjct: 71 PEGNEATAVVS 81 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWF+ KG+GFI D K+ FVH S I GF+ L G+ V + ++ +KG A++ Sbjct: 15 GTVKWFDPVKGYGFI-AGDNGKETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAID 73 Query: 66 VTA 68 V + Sbjct: 74 VIS 76 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+V F+E +G+GFI P G DVFVH + + G+ + L G VE+E + ++GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 64 VNVTAI 69 + V + Sbjct: 61 LTVRVL 66 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK+FN SKGFGFI + K+ FVH S + + E V FE++ G+KG AVN Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGL----VDEIRENDEVTFELEKGKKGLNAVN 59 Query: 66 VTAI 69 V + Sbjct: 60 VKLV 63 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/35 (68%), Positives = 26/35 (74%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG 40 G VKWFN KGFGFI+ DG DVFVHFS I G+G Sbjct: 4 GTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGDG 38 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 6/70 (8%) Query: 4 IKGQVKWFNESKGFGFITPADGS-KDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDG 57 +KG+VKW++ +GFI D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 QKGPAAVNVT 67 ++GP A NVT Sbjct: 66 KQGPEAANVT 75 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 38/60 (63%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK F+ KG+GFI P DGS +FVH + +G +TL +GQ + FEI+ G ++++ Sbjct: 4 GIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRSSIS 63 >UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=Labrenzia RepID=A0NS44_9RHOB Length = 66 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQ 55 + G VKWF+ +G G I P DG +D+ V SA++ +G TL EGQ V F+++ Sbjct: 2 LHGNVKWFDNRRGIGTIEPQDG-EDILVDISALRRSGIDTLTEGQLVAFDLE 52 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQDGQKGP 61 K++G+VK+F+ KGFGFI G D F H+S I + +KT+ G VEF+++D +G Sbjct: 2 KMEGKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGD 59 Query: 62 AAVNV 66 A NV Sbjct: 60 TAFNV 64 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%) Query: 4 IKGQVKWFNESKGFGFIT---PADGSKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQ 55 +KG VKWF+ +GF+ P D ++D FVH +AI + +TL + + V F+I Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIV 148 Query: 56 DGQKGPAAVNVT 67 +G KGP A NVT Sbjct: 149 EGLKGPEAANVT 160 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%) Query: 5 KGQVKWFNESKGFGFITP---ADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE-IQDGQKG 60 +G +KW+N KG+GFITP + DVF+H SA+ G L EGQ V ++ +Q+ G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 13/77 (16%) Query: 6 GQVKWFNESKGFGFITP-------------ADGSKDVFVHFSAIQGNGFKTLAEGQNVEF 52 G VKWF+ KG+GFI G KDVFVH +++Q + L EGQ V + Sbjct: 14 GHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVRY 73 Query: 53 EIQDGQKGPAAVNVTAI 69 ++ + +AVN+ + Sbjct: 74 QLDESNGKVSAVNLEVL 90 >UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VTL0_VIBSL Length = 81 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M +G + WF+ GFGF P G DV +H S I+ +G L EGQ V E+++ + Sbjct: 1 MICTRGYITWFHLENGFGFAKPDHGDIDVLIHISIIEFDGEINLEEGQRVYLELEEVKDK 60 Query: 61 P 61 P Sbjct: 61 P 61 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V+ F+ KG+G+I P+ G ++ VHFSAI L GQ V F+I ++GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 65 NV 66 V Sbjct: 63 RV 64 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 GQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPAAVNVTA 68 KG ++ VT Sbjct: 102 KGLESIRVTG 111 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + +VKWFN +KG+GF+ D+FVH ++ +G + L G+NV +G KG Sbjct: 135 QAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVA 194 Query: 65 NVTA 68 + A Sbjct: 195 EIEA 198 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%) Query: 3 KIKGQVKWFNESKGFGFITPADGS----KDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 +I G+VKWF+ KG+GFI P D + KDV +H ++++ +G + EG + ++ Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 59 KG 60 KG Sbjct: 86 KG 87 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + +G + W++ KG+GFI P G DVFVH S+++ NG L G +E+E G Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 AAVNVTA 68 A+NVTA Sbjct: 169 QAINVTA 175 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 7/69 (10%) Query: 6 GQVKWFNESKGFGFITPA-------DGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRSS 95 Query: 59 KGPAAVNVT 67 KG ++ VT Sbjct: 96 KGLESLQVT 104 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGP 61 + G++ + + +GFGFITP G VFVH SA+Q G + A G+ V +E+ G KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQ-KGRRPRA-GEMVTYEVGNSGDKGP 59 Query: 62 AAVNV 66 A+NV Sbjct: 60 RALNV 64 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 IKG+VK + +GFGFI D K+ + H S + K + EG +V F IQ+ KGP A Sbjct: 370 IKGKVKKYVSERGFGFIK--DREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTKGPVA 427 Query: 64 VNVTAI 69 + + Sbjct: 428 KQIKVV 433 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEF 52 G++KWF+ +KG+GFIT DG DVF+H S + TL G + + Sbjct: 4 GKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRY 50 >UniRef50_C0N6M9 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6M9_9GAMM Length = 207 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI-QDGQKGPAA 63 KG++K +NE KG+GFI P G KD+F+H ++Q G + G+ + + + +D Q A Sbjct: 6 KGKIKTWNEGKGYGFIIPESGGKDIFLHIKSVQSRG-RVPKLGETIAYTLSKDKQNRLCA 64 Query: 64 VNVT 67 ++ T Sbjct: 65 IDAT 68 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 30/51 (58%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEI 54 + G + WF+ G+GFI P DG D+ V A+ +G ++L +GQ V + + Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRL 52 >UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XI23_HIRBI Length = 69 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 35/64 (54%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 I G VK++N +GFG IT AD KDV FSA++ G + E Q V+FE + Sbjct: 2 IHGTVKYYNSEQGFGLITRADNEKDVRFTFSALKKLGITGIKERQKVKFETETNPDTGKV 61 Query: 64 VNVT 67 + VT Sbjct: 62 IAVT 65 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAI----QGNGFKTLAEGQNVEF 52 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF 104 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V F++ KG+GFI P +G +DVFVH + + G TL G V F++ DG +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 65 NVT 67 +V+ Sbjct: 62 DVS 64 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + +VKWFN +KG+GF+ D+FVH ++ G + L G +V +G KG Sbjct: 135 RAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVA 194 Query: 65 NVTA 68 +T+ Sbjct: 195 EITS 198 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%) Query: 3 KIKGQVKWFNESKGFGFITPAD----GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 +I G+VKWF+ KG+GFI P D G KDV +H ++++ G +T EG + ++ Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 59 KG 60 KG Sbjct: 77 KG 78 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAI-QGNGFKTLAEGQNVEFEIQDGQKG 60 ++ G++K +N+ +GFGFI P G +D+FVH A G G T+ GQ V FE++ G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRPTV--GQAVTFEVELGPNG 58 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/32 (65%), Positives = 23/32 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQ 37 G VKWFN KGFGFI P DG D FVH SA++ Sbjct: 4 GTVKWFNVQKGFGFIAPDDGGSDAFVHISAVE 35 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 117 1e-25 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 117 1e-25 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 115 3e-25 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 113 1e-24 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 112 3e-24 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 112 3e-24 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 112 5e-24 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 109 3e-23 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 109 3e-23 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 109 4e-23 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 108 5e-23 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 107 8e-23 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 107 9e-23 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 107 1e-22 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 107 1e-22 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 107 2e-22 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 107 2e-22 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 106 2e-22 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 106 2e-22 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 106 3e-22 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 105 5e-22 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 104 7e-22 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 104 7e-22 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 104 8e-22 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 104 8e-22 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 103 1e-21 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 103 1e-21 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 103 2e-21 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 103 2e-21 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 103 2e-21 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 103 2e-21 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 102 3e-21 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 102 3e-21 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 102 3e-21 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 102 3e-21 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 102 4e-21 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 102 5e-21 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 102 5e-21 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 102 6e-21 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 101 6e-21 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 101 8e-21 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 100 1e-20 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 100 1e-20 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 100 1e-20 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 100 2e-20 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 100 2e-20 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 100 2e-20 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 100 2e-20 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 100 2e-20 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 100 2e-20 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 100 2e-20 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 100 2e-20 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 100 2e-20 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 100 2e-20 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 100 3e-20 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 100 3e-20 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 100 3e-20 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 99 3e-20 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 99 3e-20 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 99 3e-20 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 99 4e-20 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 99 4e-20 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 99 4e-20 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 99 5e-20 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 99 5e-20 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 99 5e-20 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 99 5e-20 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 99 5e-20 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 99 5e-20 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 99 5e-20 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 99 6e-20 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 98 6e-20 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 98 8e-20 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 98 8e-20 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 98 8e-20 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 98 8e-20 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 98 8e-20 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 98 8e-20 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 98 9e-20 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 98 1e-19 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 97 1e-19 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 97 1e-19 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 97 1e-19 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 97 2e-19 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 97 2e-19 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 97 2e-19 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 97 2e-19 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 97 2e-19 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 97 2e-19 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 97 2e-19 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 97 2e-19 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 97 2e-19 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 96 2e-19 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 96 3e-19 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 96 3e-19 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 96 3e-19 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 96 3e-19 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 96 3e-19 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 96 3e-19 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 96 3e-19 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 96 3e-19 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 96 4e-19 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 96 4e-19 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 95 4e-19 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 95 4e-19 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 95 5e-19 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 95 5e-19 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 95 6e-19 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 95 7e-19 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 95 8e-19 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 95 9e-19 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 94 1e-18 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 94 1e-18 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 94 1e-18 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 94 1e-18 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 94 2e-18 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 94 2e-18 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 93 2e-18 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 93 2e-18 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 93 3e-18 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 93 3e-18 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 92 4e-18 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 92 4e-18 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 92 4e-18 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 92 6e-18 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 92 6e-18 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 92 6e-18 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 92 7e-18 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 91 8e-18 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 91 1e-17 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 91 1e-17 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 91 1e-17 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 91 1e-17 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 91 1e-17 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 91 1e-17 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 90 1e-17 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 90 1e-17 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 90 1e-17 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 90 1e-17 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 90 1e-17 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 90 2e-17 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 90 2e-17 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 90 2e-17 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 90 2e-17 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 90 2e-17 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 90 2e-17 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 89 3e-17 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 89 4e-17 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 89 5e-17 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 89 5e-17 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 89 5e-17 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 89 6e-17 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 88 8e-17 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 88 8e-17 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 88 8e-17 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 88 1e-16 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 87 1e-16 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 87 1e-16 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 87 1e-16 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 87 1e-16 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 87 1e-16 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 87 1e-16 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 87 2e-16 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 87 2e-16 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 87 2e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 87 2e-16 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 87 2e-16 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 86 3e-16 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 86 3e-16 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 86 3e-16 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 86 4e-16 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 86 4e-16 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 85 5e-16 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 85 5e-16 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 85 5e-16 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 85 5e-16 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 84 1e-15 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 84 1e-15 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 84 2e-15 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 84 2e-15 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 84 2e-15 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 84 2e-15 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 83 2e-15 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 83 3e-15 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 82 4e-15 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 82 4e-15 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 82 4e-15 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 82 4e-15 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 82 4e-15 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 82 4e-15 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 82 4e-15 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 82 5e-15 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 82 7e-15 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 82 8e-15 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 81 9e-15 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 81 1e-14 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 81 1e-14 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 81 1e-14 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 80 1e-14 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 80 2e-14 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 80 2e-14 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 80 3e-14 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 79 3e-14 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 79 4e-14 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 79 4e-14 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 79 5e-14 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 79 5e-14 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 79 6e-14 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 79 6e-14 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 79 6e-14 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 78 9e-14 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 78 9e-14 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 78 9e-14 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 78 1e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 78 1e-13 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 77 1e-13 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 77 1e-13 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 77 2e-13 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 77 2e-13 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 77 2e-13 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 77 2e-13 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 77 2e-13 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 77 2e-13 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 77 2e-13 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 77 2e-13 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 77 3e-13 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 76 3e-13 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 76 3e-13 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 76 3e-13 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 76 4e-13 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 76 4e-13 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 75 4e-13 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 75 6e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 75 6e-13 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 75 7e-13 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 75 9e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 74 1e-12 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 74 1e-12 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 74 1e-12 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 74 1e-12 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 74 1e-12 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 74 1e-12 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 74 1e-12 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 73 2e-12 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 73 3e-12 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 73 3e-12 UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepI... 72 4e-12 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 72 5e-12 UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio ... 72 5e-12 UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rh... 72 5e-12 Sequences not found previously or not previously below threshold: >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PAAVNVTAI 69 PAAVNVTAI Sbjct: 61 PAAVNVTAI 69 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PAAVNVTAI 69 P+A NV A+ Sbjct: 61 PSAANVIAL 69 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+++ G VKWFN+ KGFGFITP DG D+FVH S+I+ GF++L EG+ VEF ++ G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 P-AAVNVTA 68 AV+VT Sbjct: 61 RTKAVDVTG 69 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VKWF+ +KGFGFITP DG +D+FVH S+++ +G+++L +G VEF + G G Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 62 AAVNVTA 68 AVNVTA Sbjct: 65 KAVNVTA 71 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Query: 1 MA-KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 MA + KG VKWFN+ KG+GFITP G D+FVHF AI+GNGFK+L EGQ V FE GQK Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 60 GPAAVNVTAI 69 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 48/68 (70%), Positives = 52/68 (76%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KI G VKWFN KGFGFITP DGSKDVFVHFSAIQ N F+TL E Q VEF + G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 AAVNVTAI 69 +AVNV A+ Sbjct: 63 SAVNVVAL 70 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 45/65 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+SKGFGFITP +G DVF HFS I GF++LAE Q V F+I +G KG A Sbjct: 46 TGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQAS 105 Query: 65 NVTAI 69 N+ I Sbjct: 106 NIQPI 110 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 44/64 (68%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KG+GFI +G +D+F H+SAI +G+KTL GQ V FEI G KG A+ Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 65 NVTA 68 N+ A Sbjct: 104 NIVA 107 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFI P D S DVFVHFSAIQGNGFK L E VEFE QDG KG A N Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VTAI 69 VT + Sbjct: 64 VTKL 67 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 45/64 (70%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN++KGFGFIT G +DVF H +AI +GF+TL EGQ V+F++ G KG A Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQ 95 Query: 65 NVTA 68 NV A Sbjct: 96 NVRA 99 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 108 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 51/67 (76%), Positives = 58/67 (86%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWF+ KGFGFI+PADGSKDVFVHFSAIQGN +KTL EGQNVEF I+ GQKGP+ Sbjct: 4 KMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPS 63 Query: 63 AVNVTAI 69 AVNV A+ Sbjct: 64 AVNVVAL 70 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 46/64 (71%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWF+ KG+GFIT DG DVFVHFSAI+GNGFK+L +G VEFEI +G KGP A Sbjct: 24 YTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQA 83 Query: 64 VNVT 67 V Sbjct: 84 AKVV 87 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G KWFN KGFGF+TP DG KDVFVH I+ +GF++L E ++VEF + KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 65 NVTA 68 VT Sbjct: 132 LVTG 135 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 44/64 (68%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KG+GFITP DGSKD+F H+S I G+K+L E Q V FE+ G KGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 65 NVTA 68 N+ Sbjct: 63 NIKV 66 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 47/65 (72%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN++KGFGFI P G D+F HFS I+ +GFK+L E Q V+FE+++G KG A Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 65 NVTAI 69 N+T + Sbjct: 80 NITPL 84 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 44/66 (66%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KGFGFITP G D+FVHF AI+ +GFK+L EGQ V F + GQKG Sbjct: 25 RQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQ 84 Query: 63 AVNVTA 68 A V Sbjct: 85 AAQVRP 90 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG A Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 65 NVTAI 69 + + Sbjct: 86 VIVPL 90 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 39/63 (61%), Positives = 44/63 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+SKGFGFITP G +D+F HFSAI GFKTL EGQ V FE+ G KG A Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 65 NVT 67 N+ Sbjct: 63 NIK 65 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN SKGFGFI+ G DVFVHF AI+G G + L EGQ VEF I KG Sbjct: 174 REAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQ 232 Query: 63 AVNVTAI 69 A +V + Sbjct: 233 AEDVVPV 239 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G VKWF+ KGFGFI P DG +D+FVH ++I+ +GF+TL+EG+ VEF + G+ G Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 62 AAVNVTAI 69 AV VTA+ Sbjct: 66 KAVEVTAV 73 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 44/65 (67%), Positives = 50/65 (76%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 Query: 63 AVNVT 67 A NV Sbjct: 64 AANVI 68 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KG+GFIT DGS DVFVHFSAIQG+G+KTL EGQ V FE++D +GP AV Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 269 EKGAEAANVTG 279 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 46/65 (70%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN++KGFGFI DG DVF H +AIQ +GF+TLAEGQ VEFE + G KG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 65 NVTAI 69 NV + Sbjct: 63 NVRVV 67 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWFN++KGFGFI P G +DVF HFSAI +GF+TL +G V FE+ DG KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 64 VNVTAI 69 N+ + Sbjct: 62 QNIAPL 67 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 43/67 (64%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + + G+VKWFN +KG+GFI G +D+F H+SAIQ G++TL GQ V F I G KG Sbjct: 6 SMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGL 65 Query: 62 AAVNVTA 68 A ++ Sbjct: 66 HATDIRP 72 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWFN+ KGFGFI G DVFVHF AI G G +TL EGQ V FE+ GQKGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 VNVTAI 69 NV+ + Sbjct: 92 ENVSIV 97 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG A Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 65 NVTAI 69 + + Sbjct: 63 LIVPL 67 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKWFN KG+GFIT DG KDVFVH+S+I GFKTL EGQ V +++ + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 65 NVTAI 69 NVT + Sbjct: 82 NVTVV 86 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A +G+VKWFNE KGFGFI +G DVFVH+SAIQ +GFKTL EGQ V FE+Q GQKGP Sbjct: 24 AMPEGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGP 82 Query: 62 AAVNVTAI 69 AAVNV I Sbjct: 83 AAVNVKPI 90 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 I+G VKWFN G+GFI AD D+FVH +A+ N ++L +G+ VEF++ +GQK Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPAAVNVTA 68 GP A NVT Sbjct: 118 GPEAANVTG 126 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 44/61 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFN +KGFGFI P DG +D+F H+S IQ G+++L GQ V FE+Q G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 41/63 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFI G DVF HFS I +G++ L EGQ V FE+ GQKGP AVN Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 VTA 68 + Sbjct: 64 IVP 66 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFK----TLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N + ++ +G+ VEF++ +G Sbjct: 86 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEG 145 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 146 EKGAEAANVTG 156 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 45/63 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+ KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE Q +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 VTA 68 V++ Sbjct: 101 VSS 103 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KGFGFI DG DVFVHFSAIQ +G+K+L EGQ VEF+I DG +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 VNVTAI 69 NV + Sbjct: 60 ANVVKL 65 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 153 KGAEATNVTG 162 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 89 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 148 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 149 EKGAEAANVTG 159 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + ++KG VKWFN KG+GFI+ G KDVFVH+S + GFK+L EG VEF++ +G KG Sbjct: 17 VLEMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKG 75 Query: 61 PAAVNVTAI 69 P A NVT + Sbjct: 76 PQATNVTKL 84 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + KG VKWF++ KGFGFITP DG +D+FVH S I+ GF++LAEG+ VEFE++ G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 62 AAVNVTA 68 AV+VT Sbjct: 68 KAVDVTG 74 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN SKGFGFI +G+ DVFVHFSAI+ G+K L EG V F++ G KGPAA Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVTAI 69 NV + Sbjct: 128 NVELL 132 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KGFGFIT +GS DVFVHFSAIQ +GFK+L EGQ V F++++ +GP AV Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 65 NVT 67 NVT Sbjct: 62 NVT 64 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 44/65 (67%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFITP D DVFVH+S IQ GFKTL E V+FEI G KGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 65 NVTAI 69 VT + Sbjct: 63 GVTLV 67 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN++KG+GFI +G DVFVH+ AI+G+G ++LAEGQ VEF + GQKG Sbjct: 71 RETGTVKWFNDAKGYGFIQRGNG-ADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQ 129 Query: 63 AVNVTAI 69 A +V + Sbjct: 130 AEDVAGL 136 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 +++ G VKWFN G+GFI D +DVFVH +AI N +++ +G+ VEF++ +G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 91 EKGNEAANVTG 101 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 46/65 (70%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+SKGFGFITP G D+F HFS +QGNGFK+L EGQ V + GQKGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 65 NVTAI 69 + I Sbjct: 122 KIEPI 126 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI +G DVFVHFSAIQG+GFK+L EGQ V F++++GQ+GP A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVTAI 69 + + Sbjct: 63 VIVPV 67 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G+VKWFN +G+GFI D +DVFVH +AIQ N +++ + + VEF++ G Sbjct: 28 KVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGP 87 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 88 KGLEAANVTG 97 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ +KG+GFI DG DVFVHFSAI+GNGFKTL EGQ VEF I +G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 ADVVKL 65 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 42/69 (60%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+ G VKWFNE+KGFGFI G DVF HFSAI +GFKTLAEGQ V+F + GQKG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PAAVNVTAI 69 P A N+ I Sbjct: 60 PQAENIVCI 68 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G+ Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 76 KGREAANVTG 85 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 KIKG VKWF+ KGFGF+ P DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKW 100 Query: 62 AAVNVTA 68 A+NVT Sbjct: 101 KALNVTG 107 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFIT DG+ DVFVHFSAIQ +GFKTL EGQ V F+ + +GP A N Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 66 VTA 68 V Sbjct: 63 VVP 65 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 63 GSEAANVTG 71 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 58 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 117 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 118 EKGAEAANVTG 128 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+ KGFGF++ D DVFVH+ AI G +TL EGQ V F + +GQKG A Sbjct: 7 TGTVKWFNDEKGFGFLSR-DNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 65 NVTAI 69 NVT + Sbjct: 66 NVTPL 70 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 45/63 (71%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A + G VKWFN +KG+GFI P+ G KDVFVH SA+Q G ++L EGQ ++FEI+ Q G Sbjct: 31 AMLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGR 90 Query: 62 AAV 64 AA Sbjct: 91 AAA 93 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 89 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 90 GSEAANVTG 98 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G+V WFN SKG+GFITP DGS ++FVH S+I G+++L G VEF I G G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 -AAVNVTA 68 AVNVTA Sbjct: 69 TKAVNVTA 76 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 23 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEG 82 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 83 EKGAEAANVTG 93 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI G DVFVHFSAI G+K+L EGQ+VEFE+ +G +GP A Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 65 NVTAI 69 NV + Sbjct: 62 NVVKL 66 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 48/67 (71%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + +G+VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ D P Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAP 62 Query: 62 AAVNVTA 68 AVNVT Sbjct: 63 KAVNVTG 69 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 98.9 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 43/63 (68%), Positives = 47/63 (74%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKWFN KGFGFI G DVFVHFSAIQG+GFKTL EGQ V FEI +G +GP A Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 65 NVT 67 NVT Sbjct: 62 NVT 64 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN---GFKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 61 TKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGE 120 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 121 KGNEAANVTG 130 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KG+GFI+ +G DVFVHFSAI G+KTLAEGQ VEF++ ++G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 VNVTAI 69 VNV + Sbjct: 60 VNVRKV 65 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 47/66 (71%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +G VKWF++ KG+GFIT D + DVFVHF+ IQ GFKTL +GQ VEF++ + KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 64 VNVTAI 69 NV + Sbjct: 63 KNVRVL 68 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWFN KGFGFI ADG+ DVFVHFSAI G+GFK+L EGQ V FE+++G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 KNVVKL 67 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 86 TKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIG 145 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 146 EKGNEAANVTG 156 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 +I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 34 TRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAG 93 Query: 58 QKGPAAVNVTAI 69 KG A NVT + Sbjct: 94 AKGTEAANVTGL 105 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 31/55 (56%), Positives = 36/55 (65%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P G DVFVH SA+Q G TL EGQ V +EI ++ Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 32/60 (53%), Positives = 41/60 (68%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P G+KDVFVH SA++ +G LA+ Q V F+I+ G+ G A Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWF+ KG+GFI G DVFVHFSAIQ GFKTL EGQ+VEFEI +G +GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 64 VNVT 67 NV Sbjct: 60 ANVI 63 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 4 IKGQVKWFNESKGFGFITPAD-GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 I+G+VKWFN +KGFGFI +D+FVHFSAI+ +G+KTL GQ V FE+ G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 63 AVNV 66 A+ + Sbjct: 62 AIKI 65 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KG+GFI DG DVFVH+SAI+G+GFKTL EGQ VEFE+ + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 64 VNVTAI 69 V + Sbjct: 61 SKVRKV 66 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ KG+GFIT +G DVFVH+SAI+ GFKTL EGQ VEFEIQ+G+KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 AHVKVV 65 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 81 GSEAANVTG 89 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI G + +FVHF AI+G G + L +GQ V F + + KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NVTAI 69 NV+ + Sbjct: 173 NVSIL 177 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFI +G +DVFVH S I +GFK+L EG V F+I+ GQKGPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 66 VTAI 69 VT + Sbjct: 63 VTVV 66 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQK 59 MA +G VKWF+ KG+GFI +G D+FVH+S I FKTL GQ VEFE+ +G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPAAVNVTAI 69 G A NV + Sbjct: 61 GLHARNVVPL 70 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKW++ KG+GFI DG D+FVH SAI G+ L EG VEF++ KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAE 59 Query: 65 NVTA 68 +V Sbjct: 60 HVRV 63 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G KWFN KG+GFI P +G D+FVH +AI+ GF++LAEG+ VEF+++ G Sbjct: 23 RQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRK 82 Query: 62 AAVNVTA 68 A NVT Sbjct: 83 KARNVTG 89 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PA 62 + G KWF+ +KGFGFITP DGS+D+FVH I+ GF++LA+ + VE+EI+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 63 AVNVTA 68 AVNV+ Sbjct: 71 AVNVSG 76 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KGFGFI G DVFVH+SAI GF++L E Q V F++ G+ GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 65 NVTA 68 NV+ Sbjct: 62 NVSP 65 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 K G VKWFN +KG+GFI +DVFVHFSAIQ +G+KTL EG+ VEFE Q G KG Sbjct: 20 VKENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGL 78 Query: 62 AAVNVT 67 A NV Sbjct: 79 NAANVV 84 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 39/64 (60%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KGFGFI G DVF H+S I GF+ L EGQ V F+I GQKGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 65 NVTA 68 N+ Sbjct: 63 NIVP 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQD- 56 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + Sbjct: 28 TLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEA 87 Query: 57 GQKGPAAVNVTA 68 +KG A NVT Sbjct: 88 AKKGSEAANVTG 99 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA-- 62 G VKWFN KGFGFI P DG D FVH SA++ G L EGQ V +++ ++ Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 63 AVNVTAI 69 A N+T + Sbjct: 110 ASNLTLV 116 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/60 (48%), Positives = 39/60 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KG+GF+ P DG KDVFVH SA++ G+ +L EG V +E+ + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN +KGFGFI +G + +FVH +I G G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVTAI 69 V A+ Sbjct: 184 EVEAL 188 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++ G VKWFN++KGFGFITP G D+FVHF AIQG GFK+L EGQ V F GQKG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AVNVTAI 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Query: 1 MAKI-KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDG 57 MA++ G VKWFNE KG+GFI +G KDVFVHF + G +L+EGQ V FE+ +G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 58 QKGPAAVNVTAI 69 QKGP A NVT + Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KG+GFITP G D+FVHF AI+GNGFK+L EGQ V F GQKG Sbjct: 4 RQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQ 62 Query: 63 AVNVTAI 69 A V + Sbjct: 63 ADQVQVV 69 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +++G VKWFNE KG+GFI G KDVFVH SAI G G KTL EGQ V E+ G KG Sbjct: 3 TQVEGTVKWFNEEKGYGFIEQK-GGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 AAVNVTAI 69 A +VT + Sbjct: 62 QAEDVTPL 69 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVTA 68 KG A VT Sbjct: 85 KGDEASEVTG 94 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ +G VKWFN+SKGFGFI G +D+FVHF AIQG+G+++L +G+ VEF + +G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 AAVNVTAI 69 A V + Sbjct: 62 QAEEVRRV 69 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ--GNGFKTLAEGQNVEFEIQDGQKGP 61 I G VKWF++ KG+GF+T D DVFVHFSAI GFKTL +GQ VEFE+ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 AAVNVTAI 69 A NV + Sbjct: 63 RAKNVRVL 70 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 + KG VKWF+ KGFGFITP+DG D+FVH S+I+ GF++LA ++VEF+++ G P Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73 Query: 62 AAVNVTA 68 A+ V+ Sbjct: 74 KAIEVSG 80 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 6 GQVKWFNESKGFGFITPADGSK---DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G KWFN +G+GFITP S+ DVFVH S+I GF++L EG V+F + +KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AVNVTA 68 AV V Sbjct: 89 AVKVVG 94 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVTA 68 KG A VT Sbjct: 85 KGDEASEVTG 94 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G V+WF++ KGFGFITP +G +D+FVH S+I+ +GF++L EG+ VEF+I G+ G Sbjct: 5 RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRT 64 Query: 62 AAVNVTA 68 AV+VT Sbjct: 65 KAVDVTG 71 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ +G Sbjct: 57 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEG 115 Query: 58 QKGPAAVNVTA 68 KG A NVT Sbjct: 116 GKGAEAANVTG 126 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + G VK+FN KGFGFI DG DVFVHFS IQ +GFKTL EGQ V +++Q+ +G Sbjct: 24 VMLNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGL 82 Query: 62 AAVNVTAI 69 A+NV AI Sbjct: 83 QAINVVAI 90 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 45/67 (67%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 174 TEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGR 233 Query: 62 AAVNVTA 68 A ++T Sbjct: 234 EAQSITV 240 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 37/63 (58%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 67 TAI 69 T++ Sbjct: 125 TSV 127 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 41/66 (62%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G V+WFN +GFGF+ PADGS D+FVH S I G+G + L EGQ V F + + G Sbjct: 52 ALRTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGD 111 Query: 62 AAVNVT 67 A +V Sbjct: 112 QARDVR 117 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 43/64 (67%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN +KG+GFI S D+F HFS++Q +G+KTL GQ V F+ + KG A+ Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NVTA 68 N+ Sbjct: 63 NIVP 66 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +D+FVH SAI N +++ +G+ VEF++ +G Sbjct: 26 VKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEG 85 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 86 EKGHEAANVTG 96 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 45/67 (67%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 213 VEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGR 272 Query: 62 AAVNVTA 68 A ++T Sbjct: 273 EASSITV 279 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 67 TAI 69 ++ Sbjct: 141 NSV 143 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 94.7 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I +G Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEG 78 Query: 58 QKGPAAVNVTA 68 KG A +VT Sbjct: 79 SKGLEAASVTG 89 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VK+FN KG+GFIT G +D+FVH+SAI +G+KTL EGQ V FE+ +G +G A Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 65 NVTAI 69 NV I Sbjct: 62 NVRGI 66 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 94.7 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPA 62 G VK+FN +KGFGFITP +G KDVFVH SA++ +G ++L +GQ V F+++ + KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 63 AVNVTA 68 AVN++A Sbjct: 64 AVNLSA 69 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQDGQKGPAA 63 KG+VKWFN +KGFGFI+ D DVFVH++AI+ NG ++ L E Q VEFEI +G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 CNVKKL 67 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 23 KVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGE 82 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 83 KGHEAANVTG 92 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN++KGFGFITP G+ D+FVHF +IQG GFK+L EGQ V F + +GQKG Sbjct: 4 RQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQ 62 Query: 63 AVNVTAI 69 A V + Sbjct: 63 ADEVQVV 69 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 39/61 (63%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KGFGFITP G D+FVHF AIQGNGFK+L EGQ V F GQKG Sbjct: 4 RQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQ 62 Query: 63 A 63 A Sbjct: 63 A 63 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +G+ KWF+ +K +GF+TP DGS DVFVH I+ G+++L + VE++ Q +KG A Sbjct: 63 YRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREA 122 Query: 64 VNVTAI 69 VT + Sbjct: 123 TTVTGV 128 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFK-TLAEGQNVEFEIQDGQKGPAA 63 +G+VKWFN KG+GFI P DGSKDVFVH + + G G+ L EG+ V +E++ KG +A Sbjct: 4 RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSA 63 Query: 64 VNVTAI 69 +NV + Sbjct: 64 MNVERL 69 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 45/65 (69%), Gaps = 3/65 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G+VKWFN KG+GFI GS+DVF HFSAIQ GFK L EG VEFEI+ GQ KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 VNVTA 68 N+ Sbjct: 63 RNIVV 67 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWFN SKGFGFIT DG +++FVHF +I G G + L +GQ V F + KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 63 AVNVTAI 69 A NV + Sbjct: 139 AENVEPL 145 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KG+GFI DG +DVFVH+S I +G++ L EG+ VE+E+Q+G KG A Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 65 NVTA 68 V + Sbjct: 62 QVKS 65 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQK 59 M++ K +VKWF+ KG+GFI DG +D+FVHFSAI FK L + VEFEI QK Sbjct: 1 MSR-KSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQK 59 Query: 60 GPAAVNVTAI 69 G A NV I Sbjct: 60 GMQAKNVCEI 69 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 5/70 (7%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDGQ 58 ++G+VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ +G+ Sbjct: 66 LQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGK 125 Query: 59 KGPAAVNVTA 68 GP A NVT Sbjct: 126 NGPEAANVTG 135 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VK F+ + GFGFITP D +D+F+H S+++ + +++L + +E + G G Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 62 AAVNVTAI 69 AV+VTA+ Sbjct: 65 KAVDVTAL 72 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG---FK-TLAEGQNVEFEIQDGQ 58 ++ G V WF E KG+GFI+ D +DVFVH +AI G ++ ++ +G+ VEF++ G+ Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPAAVNVTA 68 G A NVT Sbjct: 127 WGTEAANVTG 136 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQK 59 I G+VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I G K Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 60 GPAAVNVTAI 69 G A NV+AI Sbjct: 89 GNEAANVSAI 98 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G VKWFN KGFGFI +G +D+FVHF A+ L EGQ VE+ I G+KGP Sbjct: 76 AREVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGP 134 Query: 62 AAVNVTAI 69 A V + Sbjct: 135 QAEQVVIL 142 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 38/55 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DGS DVFVH SA++ G + L +GQ + +E+ +K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M ++ G KWFN KG+GFIT +G +DVFVH S I +GF++L E + VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59 Query: 61 PAAVNVTA 68 A++VT Sbjct: 60 KKAIHVTG 67 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 91.2 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK-GPAA 63 G VKWFN +KGFGFI P DG +DVFVH SA+ G L EG VE+E++ ++ G A Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGKLA 117 Query: 64 VNVTAI 69 + Sbjct: 118 ATSIVV 123 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 39/59 (66%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 M G VKWFN +KGFGFI P G +D+FVH SA++ G L EGQ V+F+++ ++ Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 37/63 (58%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKW+N KGFGFI G KDVFVH + + +G L+EGQ V ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 VTA 68 + Sbjct: 233 IEV 235 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 I+ VKWFN KGFGF+ +DGS DVF+H A++ G +++ G + + GQKG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 64 VNVTAI 69 V + Sbjct: 126 TEVLEV 131 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VK F+ + GF FITP DGS+D+F+H S+++ +G+++L + +E + G Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 62 AAVNVTA 68 AV+VTA Sbjct: 65 KAVDVTA 71 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 37/67 (55%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I G VKWF+ KG+GFI P +G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AVNVTAI 69 A+ V + Sbjct: 97 AIRVVDV 103 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ + +G KG + Sbjct: 138 VKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEIA 197 Query: 68 A 68 Sbjct: 198 P 198 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 43/62 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KG+GFI +D+F+H+S+I +G+KTL GQ+V F+ G++G AV Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 65 NV 66 ++ Sbjct: 63 DI 64 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQG-NGFKTLAEGQNVEFEIQDGQKGPAAVN 65 VKWF+ KG+GFI D +DVFVH+S IQ + FKTL Q+V FE+ DG KG A+ Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 66 VTAI 69 V + Sbjct: 65 VAPL 68 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DG+ DVFVH SA++ G ++L EGQ V ++I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF+T DG + VFVH SA+ +G +L GQ VEF + +G++G A+ Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 65 NVTAI 69 +V + Sbjct: 65 SVRTL 69 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQG-NGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWFN KGFGFI G DVFVHF+AIQ K L EGQ V+F++++G KG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 ANVVKL 67 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPA 62 GQVK+FN KGFGFI P DG D+FVH SA+Q +G LA+ Q V +E + + KGP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 63 AVNVT 67 AVN+T Sbjct: 76 AVNIT 80 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE 53 + + G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 27 VLRGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFT 86 Query: 54 IQDGQKGPAAVNVTA 68 + KG ++ VT Sbjct: 87 FKKSSKGLESIRVTG 101 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFI-------TPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE 53 +++ G KWFN GFGFI P D + DVFVH S + GF++L EG+ +EF Sbjct: 1 LSQGSGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFS 60 Query: 54 IQDGQKGPAAVNVTA 68 + KG AV V+ Sbjct: 61 FKKSSKGLEAVRVSG 75 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQKG 60 G VKWFN G+GF+ D +DVF+H +AI N +++ +G+NVEF++ +G+KG Sbjct: 27 SGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKG 86 Query: 61 -PAAVNVTA 68 P A NVT Sbjct: 87 LPEAANVTG 95 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADG-SKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KIKG +WFN+ KGFGF+ D S+D+F H + I+ GF++L EG+ VEF + G+KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 AAVNVT 67 A+ + Sbjct: 72 QAIEIV 77 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 8/71 (11%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVH--------FSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN KG+GFITP +G DVFVH S + +GF++L G+ V F I+ Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 QKGPAAVNVTA 68 +G A V + Sbjct: 71 PEGNEATAVVS 81 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFNE KGFGFI+ DG KD F+HFS I GFKT+ EG+ VEF+I+DG+KGP A N Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 66 VTA 68 V + Sbjct: 62 VVS 64 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 42/60 (70%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P DG KDVFVH SA++ G K L++ Q + +E+Q G+ G ++ Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G+VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ+VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAADVIA 68 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF+T DG + VF+H SA+ G TL GQ VEF I +G+KG A+ Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 65 NVTAI 69 V + Sbjct: 61 QVRLL 65 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKWF+ +GFGFI P +G +++F H I G+KTL Q V ++++ G+ G AV Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 65 NVTA 68 N+ Sbjct: 64 NIIP 67 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 88.5 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK-GPAA 63 G VKWFNE+KG+GFI P +G KDVFVH SA++ G + L EGQ + +E+ ++ G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 64 V 64 Sbjct: 63 A 63 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 88.5 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG +KWFN +KGFGFIT DG++ VFVHF ++ + + GQ V + + + ++GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 65 NVTAI 69 +V+ + Sbjct: 119 DVSPL 123 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 88.5 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 40/64 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KGFGFI+ D+F H+S I+ +G+++L GQ V+FE+ KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VTAI 69 + I Sbjct: 64 IIPI 67 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 88.5 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KG 60 + G VK+F KGFGFITP +G DVFVH SA++ +G TL GQ + FE + + KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 61 PAAVNVT 67 P AV + Sbjct: 181 PKAVELR 187 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PAA 63 +G KWF+ KGFGFIT DG D+FVH + I+ GF+ LAEG++VEF +Q G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 Query: 64 VNVTA 68 V+VT Sbjct: 148 VSVTG 152 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQG---NGFKTLAEGQNVEFEIQDGQKGPA 62 G+VKW+N KG+GFI D +DVFVH SAI K+L E ++V F++ G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AVNVTA 68 A+NVT Sbjct: 65 AMNVTG 70 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 5 KGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 58 QKGPAAVNVTA 68 KG ++ VT Sbjct: 117 SKGLESIRVTG 127 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KG 60 + G KWFN SKG+GF+ +D+FVH S + GF++L EG+ V + IQ+ KG Sbjct: 52 RYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKG 111 Query: 61 PAAVNVTA 68 A V+ Sbjct: 112 REAYAVSG 119 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQG--NGFKTLAEGQNVEFEIQDGQKGPA 62 +G V+WF+ +GFGF+ DG+ D+FVH S I G +G ++L EGQ+VEFEI +G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AVNV 66 A V Sbjct: 63 ARRV 66 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 V W++ KGFGF+TP G D FVH ++ G G L EG V F + G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 67 TAI 69 + Sbjct: 223 RVV 225 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V ++ +GFGFITP G D+FVH S ++ + L EG V F+++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G V W+ +KG+GF+TP G ++F H SAI G G +AEGQ V F + +G+KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQD-GQKG 60 K KG V WFN +KGFGF+T DG DVFVH S I GF++L + + VEFE++ G Sbjct: 42 VKYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGR 101 Query: 61 PAAVNVTA 68 AV VT Sbjct: 102 YKAVKVTG 109 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G V WF+ KGFGFITP D S VFV F AI+ G++TL G V + ++ + GP AV Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 65 NVTA 68 V Sbjct: 113 AVRP 116 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 41/67 (61%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I+G VKWF+++KG+GFIT G +DV +H S ++ +G T EG V E + +KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AVNVTAI 69 A + + Sbjct: 73 ATRIINL 79 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQ + G KG A + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 67 TA 68 Sbjct: 168 EP 169 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKT------LAEGQNVEFEIQ 55 A+ +G+VKWFN +KGFG+ITP DG DVFVH SA++ GF+ +G +VEF+++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVE 68 Query: 56 D---GQKGPAAVNVTAI 69 + AV VT I Sbjct: 69 HESPTDERLKAVCVTGI 85 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWF+ ++G+GF+ P +G DVF+H S + L EG +EFEI++ +KG AV Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 65 NVTAI 69 N+ A+ Sbjct: 60 NIEAL 64 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G+KG Sbjct: 132 VECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGL 191 Query: 62 AAVNVTAI 69 +++ + Sbjct: 192 EVLSIRLV 199 Score = 53.1 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + +V WFN KGFGF+ DG++ ++ ++ +G + + EG ++ I++ +G Sbjct: 43 VNAEVMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQV 101 Query: 64 VNVTAI 69 V I Sbjct: 102 TKVREI 107 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 6/71 (8%) Query: 4 IKGQVKWFNESKGFGFITPADG-SKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDG 57 +KG+VKW++ +GFI D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 QKGPAAVNVTA 68 ++GP A NVT Sbjct: 66 KQGPEAANVTG 76 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 41/68 (60%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +++G VKWF + KGFGF+T DG KDVFVH S ++ G ++L G+ V + + KG Sbjct: 131 VELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGR 190 Query: 62 AAVNVTAI 69 A + + Sbjct: 191 EATWIQLL 198 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++ VKWFN KGFGF+ PADG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 VNVTAI 69 + + + Sbjct: 103 IRLVDV 108 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 37/62 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K G VK+FN KGFGFI DG D FVH SA++ G +L EG + FE++ ++G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AV 64 A Sbjct: 294 AA 295 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VK+FN KGFGF+ DG +DVFVH SA++ G LAEGQ + F + D +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 65 NV 66 N+ Sbjct: 197 NL 198 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQ-DGQK 59 + +G+V F++ KGFGFI P DG +D+FVH SAI+ +G +++LAE VEF + Sbjct: 12 VRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDN 71 Query: 60 GPAAVNVTA 68 AV+VTA Sbjct: 72 KYQAVDVTA 80 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 39/54 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DG +DVFVH +A++ +G L EG V +E+++ ++ Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 37/53 (69%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 VKWFN +KGFGFI P +G D+FVH SA++ G + L EGQ V +E++ ++ Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G VK+FNE+KGFGFI D+FVH SA+ + E V F I+ G+KG Sbjct: 135 ALQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGL 190 Query: 62 AAVNVTAI 69 AVN+ + Sbjct: 191 NAVNIKLL 198 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 3/68 (4%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ-- 58 MA+ G VK+FN KGFGFI P +G D+FVH SA+Q +G L+E Q V F+ + + Sbjct: 1 MAE-TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRG 59 Query: 59 KGPAAVNV 66 KGP AVN+ Sbjct: 60 KGPKAVNL 67 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 37/62 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VK+FN KGFGFI DG D FVH SA++ G L EG ++FE++ ++G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AV 64 A Sbjct: 144 AA 145 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Query: 5 KGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 58 QKGPAAVNVTA 68 KG ++ VT Sbjct: 95 SKGLESLQVTG 105 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G VK+F+ KGFGF+ G KDVFVH A++ +G KTL GQ V G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 VNVTAI 69 V I Sbjct: 195 DTVAII 200 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 43/68 (63%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A + VKWFN SKGFGF+ P+DGS D F+H SA++ G +AEG + ++ GQ+GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 AAVNVTAI 69 V V + Sbjct: 107 QVVMVHEV 114 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWF+ ++GFGFI DV VHFS ++ +G +TL EG + E+ +G A Sbjct: 34 VVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQA 93 Query: 64 VNVTAI 69 + AI Sbjct: 94 RRILAI 99 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 VKWFN KG+GF+ ++D+F+H ++ G L ++ I +G+KGP AV + Sbjct: 137 VKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVELI 196 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G +KWFN +KGFGFI DG++ VFVH+ ++G +++ +GQ V + ++ +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVTAI 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPAD-GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 K+ G +KWF+ +KG+GFI P G D+ +H ++++ +GF+T EG + E++ G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 AAVNVTAI 69 V ++ Sbjct: 85 QCFRVLSM 92 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 39/65 (60%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VK + + +G+G+ITP G +DVFVHF+ I GFK L +G+ V + + G K P A Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 65 NVTAI 69 V I Sbjct: 63 QVQPI 67 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+ KGFGFI P +G DVFVH + ++ +G TL E V++++ + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 65 NVTAI 69 N+ + Sbjct: 69 NIQLL 73 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 GQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPAAVNVTA 68 KG ++ VT Sbjct: 102 KGLESIRVTG 111 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G +KWF+ SKG+GF+ P +G DV +H + ++ +G++T EG + E KG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PAAVNVTAI 69 A + ++ Sbjct: 126 YQAFRIVSM 134 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + QVKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G KG A Sbjct: 162 RAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAA 221 Query: 65 NVTA 68 + Sbjct: 222 EIQP 225 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFITPAD----GSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQ 55 M+K++G VKWF+ KG+GF+ P ++++FVH ++IQ G ++TL E +EF+++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 -DGQKGP-AAVNVTA 68 + + G A+NVTA Sbjct: 61 KEAESGKFKAINVTA 75 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDGQKG 60 K +G +WF++ KG+GFI ADG KD+FVH+S+IQ G KTL E VEF +++G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PAAVNVTAI 69 AV+V + Sbjct: 64 AQAVDVVVV 72 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQKGP 61 + G+V F++ KGFGFI P G KD+FVH SAI+ + G++TL E VEF I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKY 72 Query: 62 AAVNVTA 68 AV+VTA Sbjct: 73 QAVDVTA 79 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 44/68 (64%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KG+VKWF++ G+GFI+P DG D++VH +AI K+L GQ+VEF + G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAEDVIA 68 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+KG VKWFN+SKG GFI D DVFVH+ +I G KTL +GQ V F I + G Sbjct: 4 KLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AVNV 66 A V Sbjct: 63 ASEV 66 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MA + G+V F+E +G+GFI P DGS DVFVH + + G+ + L G VE++ + ++G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PAAVNVTA 68 P AV V Sbjct: 64 PKAVLVRV 71 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+V WFN+ KGFGFIT DG DVFVH++ I +GF++L G+ V + + D + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AVNV 66 AV+V Sbjct: 61 AVDV 64 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AAV 64 G VK+FN KG+GFI DGS D FVH +A+Q G TL + Q V +E++ G+ G +A+ Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 65 NVTA 68 N+ + Sbjct: 86 NLQS 89 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A+ V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 67 TAI 69 + Sbjct: 195 RPL 197 Score = 78.5 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G++KWF+ KG+GF+ +G DV +H +A++ +G EG V E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 Query: 61 PAAVNVTAI 69 V ++ Sbjct: 90 WQVFRVISL 98 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWF+ KG+GF+ G +D+FVH S ++G+ +L +G VE+E+ ++GP Sbjct: 133 REQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPN 190 Query: 63 AVNVTAI 69 A V + Sbjct: 191 ARRVRVL 197 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQKG 60 +G VK+F KGFGFI P DG +DVFVH++ I+ +G FK L EG VE+ KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 61 PAAVNVTAI 69 A +V + Sbjct: 63 TQAKDVVKL 71 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 42/66 (63%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 I G+VKWFN +K FGFI +G KDVFVH SA+ G L EGQ+V F+++D Sbjct: 3 TNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKI 62 Query: 62 AAVNVT 67 +AVN+ Sbjct: 63 SAVNLR 68 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN +KGFGFI G +++FVHF A+Q G ++L G V F+ + +G A Sbjct: 12 RGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQAD 70 Query: 65 NV 66 NV Sbjct: 71 NV 72 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWF+ KG+GFI +G K+ FVH S I GF+ L G+ V + ++ +KG A+ Sbjct: 14 HGTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAI 72 Query: 65 NVTA 68 +V + Sbjct: 73 DVIS 76 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 81.2 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF++ +G +DV+V SA+ G + L GQ VEF I G++GP A+ Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 65 NVTAI 69 ++ + Sbjct: 111 SLKLL 115 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VK F+ + GFGFI FV ++AI+ G+K+L GQ V +++ G+KG + Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 65 NV 66 NV Sbjct: 63 NV 64 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF++ DG +DV+V SA+ G + L GQ VEF + G++GP A+ Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 65 NVTAI 69 ++ I Sbjct: 74 SLKLI 78 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G++ F+E +G+GFI P +G +DVF+H + + + + L G VEF++++G +G A Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 66 VT 67 V Sbjct: 68 VR 69 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF-KTLAEGQNVEFEIQDGQK 59 MA G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+++ F+I + +K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPAAVNV 66 GPAA+NV Sbjct: 60 GPAAINV 66 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL 44 + KG VKWF+ KGFGFITP DG D+FVH S+I+ GF++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G V F++ +GFGFI S+DVFVH I+ ++L+ GQ VEF+ + KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 64 VNVTA 68 +NV Sbjct: 59 INVIP 63 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 34/65 (52%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G V F+ KG+GFI P G +DVF+H S + + L G VEFE G +G A+ Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 65 NVTAI 69 V + Sbjct: 63 TVNLL 67 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ-GNGFKTLAEGQNVEFEIQDGQKGPAA 63 KG++K+F+ S+GFGFI P DGS+DVF+H + I + L EGQ +E+E + +KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 64 VN 65 +N Sbjct: 63 LN 64 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V F++ KG+GFI P +G +DVFVH + + G TL G V F++ DG +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 65 NVT 67 +V+ Sbjct: 62 DVS 64 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 + +G + W++ KG+GFI P G DVFVH S+++ NG L G +E+E G Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 AAVNVTA 68 A+NVTA Sbjct: 169 QAINVTA 175 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG +V IQ +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AVNVTAI 69 AV V I Sbjct: 70 AVEVLEI 76 Score = 68.5 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWF+++KGFGF DVF+H ++ +GF LA G+ + + DG++G A + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 78.5 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G VKWF+ +KGFGF+ +G D+ +H + ++ G ++A+G +E + Q+G Sbjct: 9 AVTTGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGV 68 Query: 62 AAVNVTAI 69 A V AI Sbjct: 69 QATQVHAI 76 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWF++SKGFGF S D+F+H ++ +G L G+ + + G++G A V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 67 TA 68 A Sbjct: 167 HA 168 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%) Query: 4 IKGQVKWFNESKGFGFITPA---DGSKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQ 55 +KG VKWF+ +GF+ D ++D FVH +AI + +TL + + V F+I Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIV 148 Query: 56 DGQKGPAAVNVTA 68 +G KGP A NVT Sbjct: 149 EGLKGPEAANVTG 161 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 37/68 (54%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G VKW++ S G G I+P DG D++V+ + I K L EGQ VEF G++ Sbjct: 1 MTLKMGFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRS 60 Query: 61 PAAVNVTA 68 A +V A Sbjct: 61 QMAEDVIA 68 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAI----QGNGFKTLAEGQNVEFEIQDGQ 58 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF + + Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVIATK 110 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+V F+E +G+GFI P G DVFVH + + G+ + L G VE+E + ++GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 64 VNVTAI 69 + V + Sbjct: 61 LTVRVL 66 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLA---EGQNVEFEIQDGQKG 60 +KG+VKWFN++KG+GFI D K+ FVH+ +I N + L + + V F++ + KG Sbjct: 5 MKGKVKWFNKNKGYGFIITDDN-KEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PAAVNVTAI 69 A+N+ + Sbjct: 64 IQAINIIRV 72 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G++ F+ S+GFGFI P DG DVFVH + I G L +G+ EF++ +G +G Sbjct: 1 MLVSIGKLVSFDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRG 59 Query: 61 PAAVNVTAI 69 P A+N++A+ Sbjct: 60 PKAINLSAV 68 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 34/62 (54%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VK F+ + +GFI FV + +I+ G+K L GQ V +++ G+KG + Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 65 NV 66 NV Sbjct: 63 NV 64 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VK+FN +KGFGFI D ++D+FVH S + + E V+FE++ G+KG AV Sbjct: 3 EGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAV 58 Query: 65 NVTAI 69 NV I Sbjct: 59 NVEVI 63 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 V+WF+ G+G I D ++VF+ F+AI G G++T+A V FE+ G GP A NV Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFITPADGSK-DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G V WF+ KGFGFI PA+G + VFV FS+I+ +G++TL EGQ V F G+ Sbjct: 15 YHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR--AE 72 Query: 63 AVNVTAI 69 AV V + Sbjct: 73 AVAVRPL 79 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + +VKWFN +KG+GF+ D+FVH ++ +G + L G+NV +G KG Sbjct: 135 QAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVA 194 Query: 65 NVTA 68 + A Sbjct: 195 EIEA 198 Score = 76.6 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGS----KDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 +I G+VKWF+ KG+GFI P D + KDV +H ++++ +G + EG + ++ Sbjct: 25 VRITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRR 84 Query: 58 QKGPAAVNVTAI 69 KG V + Sbjct: 85 PKGWQVAEVVDL 96 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 +++ VKWFN +KGFGF+ +DG D F+H S +Q G+ L EG + ++ GQKG Sbjct: 2 LSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKG 61 Query: 61 PAAVNV 66 + Sbjct: 62 MQVSEI 67 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 40/68 (58%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +I G VK+F+ KGFGF+ P G KDV+V +Q G L +GQ V I+ G+KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 62 AAVNVTAI 69 A ++ I Sbjct: 203 MAGSLELI 210 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KI G VK + KGFGFI G DVFVHFSAIQ + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PAAVNVTAI 69 P A V + Sbjct: 60 PQAAAVEVL 68 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGS-KDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 + +I G +KWF+ SKG+GF+TP D+ +H S +Q +GF+T EG V ++ ++ Sbjct: 11 IVEITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKR 70 Query: 60 GPAAVNVTAI 69 G + V +I Sbjct: 71 GLKCIQVKSI 80 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + VKWFN KGFGF++ G++D+F+H ++ G L GQ V G+KG Sbjct: 107 RAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTA 166 Query: 65 NV 66 + Sbjct: 167 EI 168 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 36/62 (58%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V+ F+ KG+G+I P+ G ++ VHFSAI L GQ V F+I ++GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 65 NV 66 V Sbjct: 63 RV 64 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 5 KGQVKWFNESKGFGFITPA---DGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ-KG 60 +G +KW+N KG+GFITP + DVF+H SA+ G L EGQ V ++ G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 61 P-AAVNVTAI 69 +A N+ + Sbjct: 64 KYSAENLKLV 73 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +KG V WFN+ KGFGFI G +D++VH+S + +GFKTL G+ V FE+ D P A Sbjct: 3 LKGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 VNVTAI 69 V I Sbjct: 62 TAVRII 67 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 7/73 (9%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAE------GQNVEFEIQ 55 A + QV WFN +G+G++ P DGS+DVFVH S +Q +GF+++ E G +EFE+ Sbjct: 38 ASRREQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELD 97 Query: 56 DGQKGPAAVNVTA 68 D ++ A NVT Sbjct: 98 DDER-RRAKNVTG 109 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 76.6 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 38/64 (59%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + +VKWF+++KGFGF S+DVFVH ++ +GF L G+ V ++ DG +G A Sbjct: 113 VAARVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMA 172 Query: 64 VNVT 67 V Sbjct: 173 AEVR 176 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWF+ +KGFGF+ +G D+ +H + ++ G ++AEG V Q +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 64 VNVTAI 69 V + AI Sbjct: 82 VEIIAI 87 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+V+W++ KG+GFI DG KDVF+ +A+ K+L +G VEF + +G+KGP A+ Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 VTAI 69 + I Sbjct: 62 LNVI 65 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+++WF+ KG+GFI DG KDVF+ +A+ G + +G VE+ + +G +G A+ Sbjct: 21 SGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALP-QGVRNPRKGAKVEYSVIEGNRGQVAM 78 Query: 65 NVTAI 69 VT + Sbjct: 79 GVTMV 83 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G V WF+ K +GFIT G+ +FVH A+ G+G + L EG+ V F + G KG Sbjct: 4 RSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMKGDE 61 Query: 63 AVNVTA 68 A +V Sbjct: 62 ANDVLV 67 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFIT-PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +KG+VK F+E KG+GFIT P +G ++FVH+S I+G + L + V I GQKGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 63 AVNVTAI 69 A +V + Sbjct: 60 AAHVRVL 66 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VK+FN+SKGFGFIT KD FVH S + + EG VEFE+++G KG AV Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAV 58 Query: 65 NVTAI 69 NV + Sbjct: 59 NVRVL 63 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 11/70 (15%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 +I G VKWFN GFGFIT D +D+FVH S I K++ +G+ VEF Sbjct: 33 RITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF------ 86 Query: 59 KGPAAVNVTA 68 G A VT Sbjct: 87 -GLIASKVTG 95 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + + G+V ++ ++GFGF+ P G DVF+H + I + +L G V F++++ +G Sbjct: 4 VVAVSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRG 62 Query: 61 PAAVNV 66 AVNV Sbjct: 63 AKAVNV 68 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 33/68 (48%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+I G V F KGFGFITP +G + F H S + G + G + F KG Sbjct: 235 AEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGL 294 Query: 62 AAVNVTAI 69 AA N+ + Sbjct: 295 AAHNIRKL 302 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 4 IKGQVKWFNESKGFGFITPAD-------------GSKDVFVHFSAIQGNGFKTLAEGQNV 50 G VKWF+ KG+GFI G KDVFVH +++Q + L EGQ V Sbjct: 12 YTGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRV 71 Query: 51 EFEIQDGQKGPAAVNVTAI 69 +++ + +AVN+ + Sbjct: 72 RYQLDESNGKVSAVNLEVL 90 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VK+FNESKG+GFI D ++D+FVH + + G T+ E V+FE+ DG+KG AV Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLNAV 59 Query: 65 NVTAI 69 V I Sbjct: 60 KVKKI 64 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PAA 63 G VK+FN KG+GFI P DG+ D+F+H + + + VE+E+ G G A Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 64 VNVTAI 69 V I Sbjct: 62 ERVALI 67 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + G + WF+ G+GFI P DG D+ V A+ +G ++L +GQ V + + + G Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFG 58 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 + +VKWFN +KG+GF+ D+FVH ++ G + L G +V +G KG Sbjct: 135 RAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVA 194 Query: 65 NVTA 68 +T+ Sbjct: 195 EITS 198 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPAD----GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 +I G+VKWF+ KG+GFI P D G KDV +H ++++ G +T EG + ++ Sbjct: 16 VRISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKR 75 Query: 58 QKGPAAVNVTAI 69 KG V + Sbjct: 76 PKGWQVSEVVDL 87 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G++KWF+ +KG+GFIT DG DVF+H S + TL G + + + +A Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAH 62 Query: 65 NVTAI 69 +++ + Sbjct: 63 DLSLM 67 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+V F+ +G+GFI P G +DVF+H + + + G VEFEI+DG +G A Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 66 VT 67 V Sbjct: 63 VR 64 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 3/54 (5%) Query: 12 NESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 N KGFGF P G VFVHFS I G GFKTL EGQ++E+E+ GQKG A N Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAEN 75 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWF+ +G+GF+T + DVF+H + ++ GF+ + G +E +G KG A + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Query: 67 TA 68 Sbjct: 169 KV 170 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M +++G+VKW++ ++G+GFI +DG D+ +H S ++ G + + G KG Sbjct: 13 MLELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKG 72 Query: 61 PAAVNVTAI 69 AV + + Sbjct: 73 RQAVELVEM 81 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ-GNGFKTLAEGQNVEFEIQDGQKGP 61 ++ G++K +N+ +GFGFI P G +D+FVH A G G T+ GQ V FE++ G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRPTV--GQAVTFEVELGPNGK 59 Query: 62 A 62 Sbjct: 60 K 60 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 73.1 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFIT-PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 I+ +K ++ +KG+G+IT P DG DV+ H AI+G + +GQ VE I GQ+GP Sbjct: 2 IQATIKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 63 AVNVTAI 69 A +VT I Sbjct: 60 AAHVTII 66 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 37/46 (80%), Positives = 39/46 (84%) Query: 14 SKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 KGFGFITPADGSKDVFVHFSAIQ N FKTL EGQ VEF I++G K Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepID=Q5L9T7_BACFN Length = 69 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 +A + G++++FN +KG+GF+ AD + F H S+ T+AEG V FEI+ G +G Sbjct: 3 VAPLMGRIEYFNAAKGYGFVKDADNGEKYFFHISSAPA----TIAEGDRVTFEIERGMRG 58 Query: 61 PAAVNVTAI 69 AV ++ + Sbjct: 59 MNAVRISIV 67 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +I G +K +N+ KGFGFI P++G +D+FVH S G G+++ F + Q G Sbjct: 10 TRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQDGK 68 Query: 62 -AAVNV 66 A+NV Sbjct: 69 NKAINV 74 >UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VTL0_VIBSL Length = 81 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M +G + WF+ GFGF P G DV +H S I+ +G L EGQ V E+++ + Sbjct: 1 MICTRGYITWFHLENGFGFAKPDHGDIDVLIHISIIEFDGEINLEEGQRVYLELEEVKDK 60 Query: 61 PA--AVNVTAI 69 P AV V + Sbjct: 61 PHWNAVKVLPL 71 >UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rhodobacteraceae RepID=A6FNL2_9RHOB Length = 135 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWF++ KGFGF +DVFVH ++ +G L G+ + + +G++G A V Sbjct: 65 RVKWFDKGKGFGFANTFGRDEDVFVHVEVLRRSGLADLQPGEALAMRVIEGKRGRMATEV 124 Query: 67 TA 68 Sbjct: 125 CG 126 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 104 9e-22 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 103 2e-21 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 102 3e-21 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 102 4e-21 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 102 5e-21 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 100 1e-20 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 100 2e-20 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 99 3e-20 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 99 5e-20 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 99 5e-20 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 99 5e-20 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 99 5e-20 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 99 6e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 98 7e-20 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 98 8e-20 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 96 3e-19 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 96 3e-19 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 96 4e-19 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 96 4e-19 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 96 5e-19 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 95 6e-19 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 95 6e-19 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 95 7e-19 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 95 9e-19 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 95 9e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 94 1e-18 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 94 1e-18 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 94 2e-18 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 93 3e-18 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 93 3e-18 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 93 3e-18 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 92 4e-18 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 92 5e-18 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 92 5e-18 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 92 5e-18 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 92 6e-18 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 92 7e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 91 8e-18 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 91 9e-18 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 91 1e-17 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 91 1e-17 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 91 1e-17 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 90 1e-17 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 90 1e-17 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 90 2e-17 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 90 2e-17 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 90 2e-17 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 90 2e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 90 2e-17 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 89 3e-17 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 89 3e-17 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 89 3e-17 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 89 3e-17 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 89 4e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 89 4e-17 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 89 4e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 89 4e-17 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 89 4e-17 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 89 4e-17 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 89 4e-17 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 89 4e-17 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 89 5e-17 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 89 5e-17 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 89 5e-17 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 89 5e-17 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 89 5e-17 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 89 5e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 89 5e-17 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 88 6e-17 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 88 7e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 88 7e-17 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 88 7e-17 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 88 7e-17 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 88 9e-17 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 88 9e-17 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 87 1e-16 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 87 1e-16 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 87 1e-16 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 87 1e-16 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 87 1e-16 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 87 1e-16 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 87 1e-16 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 87 1e-16 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 87 2e-16 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 87 2e-16 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 87 2e-16 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 87 2e-16 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 86 2e-16 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 86 2e-16 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 86 3e-16 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 86 3e-16 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 86 3e-16 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 86 3e-16 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 86 3e-16 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 86 3e-16 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 86 3e-16 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 86 4e-16 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 86 4e-16 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 85 4e-16 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 85 4e-16 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 85 5e-16 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 85 6e-16 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 85 6e-16 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 85 6e-16 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 85 6e-16 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 85 7e-16 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 85 7e-16 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 85 7e-16 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 85 9e-16 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 84 1e-15 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 84 1e-15 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 84 1e-15 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 84 1e-15 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 84 1e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 84 1e-15 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 84 1e-15 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 84 1e-15 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 84 1e-15 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 84 1e-15 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 84 2e-15 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 83 2e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 83 3e-15 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 83 3e-15 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 83 3e-15 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 83 3e-15 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 83 3e-15 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 83 3e-15 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 82 4e-15 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 82 4e-15 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 82 4e-15 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 82 5e-15 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 82 5e-15 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 82 6e-15 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 82 6e-15 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 82 7e-15 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 82 7e-15 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 82 8e-15 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 81 8e-15 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 81 9e-15 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 81 9e-15 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 81 9e-15 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 81 1e-14 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 81 1e-14 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 81 1e-14 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 81 1e-14 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 80 1e-14 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 80 1e-14 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 80 2e-14 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 80 2e-14 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 80 2e-14 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 80 3e-14 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 80 3e-14 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 79 4e-14 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 79 4e-14 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 79 4e-14 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 79 5e-14 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 79 5e-14 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 79 5e-14 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 79 5e-14 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 79 6e-14 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 78 7e-14 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 78 7e-14 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 78 7e-14 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 78 8e-14 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 78 9e-14 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 78 9e-14 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 78 9e-14 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 78 1e-13 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 78 1e-13 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 78 1e-13 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 77 1e-13 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 77 1e-13 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 77 2e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 77 2e-13 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 77 2e-13 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 77 2e-13 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 76 3e-13 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 76 3e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 76 3e-13 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 76 4e-13 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 75 5e-13 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 75 5e-13 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 75 6e-13 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 75 8e-13 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 75 8e-13 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 75 8e-13 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 75 9e-13 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 74 1e-12 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 74 1e-12 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 74 1e-12 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 74 1e-12 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 74 1e-12 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 74 1e-12 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 74 1e-12 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 74 1e-12 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 74 1e-12 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 74 2e-12 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 74 2e-12 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 74 2e-12 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 73 2e-12 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 73 3e-12 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 73 3e-12 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 73 3e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 73 3e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 73 4e-12 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 73 4e-12 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 73 4e-12 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 73 4e-12 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 72 4e-12 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 72 4e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 5e-12 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 72 6e-12 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 72 7e-12 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 72 7e-12 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 71 8e-12 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 71 8e-12 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 71 8e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 71 9e-12 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 71 9e-12 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 71 9e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 71 1e-11 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 71 1e-11 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 71 1e-11 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 71 1e-11 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 71 1e-11 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 71 1e-11 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 71 1e-11 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 70 1e-11 UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Ch... 70 2e-11 UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Ps... 70 2e-11 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 70 2e-11 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 70 2e-11 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 70 2e-11 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 70 2e-11 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 70 2e-11 UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alterom... 70 2e-11 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 70 2e-11 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 70 2e-11 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 70 2e-11 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 70 3e-11 UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewane... 70 3e-11 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 69 3e-11 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 69 3e-11 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 69 3e-11 UniRef50_A6C742 Cold-shock DNA-binding domain n=1 Tax=Planctomyc... 69 3e-11 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 69 3e-11 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 69 4e-11 UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n... 69 4e-11 UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromona... 69 4e-11 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 69 4e-11 Sequences not found previously or not previously below threshold: >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+++ G VKWFN+ KGFGFITP DG D+FVH S+I+ GF++L EG+ VEF ++ G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 P-AAVNVTA 68 AV+VT Sbjct: 61 RTKAVDVTG 69 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 45/67 (67%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN+SKGFGFITP +G DVF HFS I GF++LAE Q V F+I +G KG Sbjct: 44 MATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQ 103 Query: 63 AVNVTAI 69 A N+ I Sbjct: 104 ASNIQPI 110 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PAAVNVTAI 69 P+A NV A+ Sbjct: 61 PSAANVIAL 69 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Query: 1 MA-KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 MA + KG VKWFN+ KG+GFITP G D+FVHF AI+GNGFK+L EGQ V FE GQK Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 60 GPAAVNVTAI 69 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PAAVNVTAI 69 PAAVNVTAI Sbjct: 61 PAAVNVTAI 69 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VKWF+ +KGFGFITP DG +D+FVH S+++ +G+++L +G VEF + G G Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 62 AAVNVTA 68 AVNVTA Sbjct: 65 KAVNVTA 71 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 48/68 (70%), Positives = 52/68 (76%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KI G VKWFN KGFGFITP DGSKDVFVHFSAIQ N F+TL E Q VEF + G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 AAVNVTAI 69 +AVNV A+ Sbjct: 63 SAVNVVAL 70 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 44/66 (66%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KGFGFITP G D+FVHF AI+ +GFK+L EGQ V F + GQKG Sbjct: 25 RQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQ 84 Query: 63 AVNVTA 68 A V Sbjct: 85 AAQVRP 90 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 44/64 (68%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KG+GFI +G +D+F H+SAI +G+KTL GQ V FEI G KG A+ Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 65 NVTA 68 N+ A Sbjct: 104 NIVA 107 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFI P D S DVFVHFSAIQGNGFK L E VEFE QDG KG A N Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VTAI 69 VT + Sbjct: 64 VTKL 67 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 44/65 (67%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN+SKGFGFITP G +D+F HFSAI GFKTL EGQ V FE+ G KG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 63 AVNVT 67 A N+ Sbjct: 61 ASNIK 65 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 47/67 (70%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN++KGFGFI P G D+F HFS I+ +GFK+L E Q V+FE+++G KG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 63 AVNVTAI 69 A N+T + Sbjct: 78 AANITPL 84 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 45/66 (68%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN++KGFGFIT G +DVF H +AI +GF+TL EGQ V+F++ G KG Sbjct: 34 MATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQ 93 Query: 63 AVNVTA 68 A NV A Sbjct: 94 AQNVRA 99 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 44/66 (66%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN KG+GFITP DGSKD+F H+S I G+K+L E Q V FE+ G KGP+ Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 63 AVNVTA 68 A N+ Sbjct: 61 AKNIKV 66 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 46/65 (70%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWF+ KG+GFIT DG DVFVHFSAI+GNGFK+L +G VEFEI +G KGP Sbjct: 23 MYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQ 82 Query: 63 AVNVT 67 A V Sbjct: 83 AAKVV 87 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN SKGFGFI+ G VFVHF AI+G G + L EGQ VEF I KG Sbjct: 174 REAGTVKWFNTSKGFGFISRDSGDD-VFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQ 232 Query: 63 AVNVTAI 69 A +V + Sbjct: 233 AEDVVPV 239 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 46/67 (68%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN++KGFGFI P G +DVF HFSAI +GF+TL +G V FE+ DG KG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 63 AVNVTAI 69 A N+ + Sbjct: 61 AQNIAPL 67 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG A Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 65 NVTAI 69 + + Sbjct: 86 VIVPL 90 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 51/67 (76%), Positives = 58/67 (86%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWF+ KGFGFI+PADGSKDVFVHFSAIQGN +KTL EGQNVEF I+ GQKGP+ Sbjct: 4 KMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPS 63 Query: 63 AVNVTAI 69 AVNV A+ Sbjct: 64 AVNVVAL 70 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 46/67 (68%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN++KGFGFI DG DVF H +AIQ +GF+TLAEGQ VEFE + G KG Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 63 AVNVTAI 69 A NV + Sbjct: 61 AENVRVV 67 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G KWFN KGFGF+TP DG KDVFVH I+ +GF++L E ++VEF + KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 65 NVTA 68 VT Sbjct: 132 LVTG 135 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G VKWF+ KGFGFI P DG +D+FVH ++I+ +GF+TL+EG+ VEF + G+ G Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 62 AAVNVTAI 69 AV VTA+ Sbjct: 66 KAVEVTAV 73 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 41/63 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KGFGFI G DVF HFS I +G++ L EGQ V FE+ GQKGP AVN Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 VTA 68 + Sbjct: 64 IVP 66 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 94.7 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 43/67 (64%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + + G+VKWFN +KG+GFI G +D+F H+SAIQ G++TL GQ V F I G KG Sbjct: 6 SMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGL 65 Query: 62 AAVNVTA 68 A ++ Sbjct: 66 HATDIRP 72 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 94.7 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 44/66 (66%), Positives = 50/66 (75%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 Query: 63 AVNVTA 68 A NV Sbjct: 64 AANVII 69 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI G + +FVHF AI+G G + L +GQ V F + + KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NVTAI 69 NV+ + Sbjct: 173 NVSIL 177 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G VKWFN+ KGFGFI G DVFVHF AI G G +TL EGQ V FE+ GQKGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 VNVTAI 69 NV+ + Sbjct: 92 ENVSIV 97 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 269 EKGAEAANVTG 279 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ V F++ G KG A Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 65 NVTAI 69 + + Sbjct: 63 LIVPL 67 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKWFN KG+GFIT DG KDVFVH+S+I GFKTL EGQ V +++ + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 65 NVTAI 69 NVT + Sbjct: 82 NVTVV 86 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQK 59 I+G VKWFN G+GFI AD D+FVH +A+ N ++L +G+ VEF++ +GQK Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPAAVNVTA 68 GP A NVT Sbjct: 118 GPEAANVTG 126 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KG+GFIT DGS VFVHFSAIQG+G+KTL EGQ V FE++D +GP AV Sbjct: 3 HGTVKWFNAEKGYGFITREDGSD-VFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 44/61 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+VKWFN +KGFGFI P DG +D+F H+S IQ G+++L GQ V FE+Q G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + KG VKWF++ KGFGFITP DG +D+FVH S I+ GF++LAEG+ VEFE++ G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 62 AAVNVTA 68 AV+VT Sbjct: 68 KAVDVTG 74 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFK----TLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N + ++ +G+ VEF++ +G Sbjct: 86 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEG 145 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 146 EKGAEAANVTG 156 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 91.7 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+ KGFGF++ + S VFVH+ AI G +TL EGQ V F + +GQKG A Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDSD-VFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 65 NVTAI 69 NVT + Sbjct: 66 NVTPL 70 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A +G+VKWFNE KGFGFI +G VFVH+SAIQ +GFKTL EGQ V FE+Q GQKGP Sbjct: 24 AMPEGKVKWFNEQKGFGFIEKDEGGD-VFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGP 82 Query: 62 AAVNVTAI 69 AAVNV I Sbjct: 83 AAVNVKPI 90 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN +KGFGFI +G + +FVH +I G G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVTAI 69 V A+ Sbjct: 184 EVEAL 188 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 46/65 (70%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+SKGFGFITP G D+F HFS +QGNGFK+L EGQ V + GQKGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 65 NVTAI 69 + I Sbjct: 122 KIEPI 126 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G+V WFN SKG+GFITP DGS ++FVH S+I G+++L G VEF I G G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 -AAVNVTA 68 AVNVTA Sbjct: 69 TKAVNVTA 76 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 89 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 148 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 149 EKGAEAANVTG 159 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN++KG+GFI DVFVH+ AI+G+G ++LAEGQ VEF + GQKG Sbjct: 71 RETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQ 129 Query: 63 AVNVTAI 69 A +V + Sbjct: 130 AEDVAGL 136 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KGFGFI DG VFVHFSAIQ +G+K+L EGQ VEF+I DG +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGDD-VFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 VNVTAI 69 NV + Sbjct: 60 ANVVKL 65 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 48/67 (71%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + +G+VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ D P Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAP 62 Query: 62 AAVNVTA 68 AVNVT Sbjct: 63 KAVNVTG 69 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 40/67 (59%), Positives = 44/67 (65%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +G VKWFN KGFGFITP D DVFVH+S IQ GFKTL E V+FEI G KGP Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 63 AVNVTAI 69 A VT + Sbjct: 61 ATGVTLV 67 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + ++KG VKWFN KG+GFI+ + KDVFVH+S + GFK+L EG VEF++ +G KG Sbjct: 17 VLEMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKG 75 Query: 61 PAAVNVTAI 69 P A NVT + Sbjct: 76 PQATNVTKL 84 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN KGFGFI +G VFVHFSAIQG+GFK+L EGQ V F++++GQ+GP A Sbjct: 3 QGTVKWFNAEKGFGFIERENGDD-VFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NVT 67 NV Sbjct: 62 NVQ 64 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G+ Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 76 KGREAANVTG 85 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 47/66 (71%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +G VKWF++ KG+GFIT D + DVFVHF+ IQ GFKTL +GQ VEF++ + KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 64 VNVTAI 69 NV + Sbjct: 63 KNVRVL 68 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 89 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 90 GSEAANVTG 98 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 43/65 (66%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G+VKWFN KGFGFI G DVFVHFSAIQG+GFKTL EGQ V FEI +G +GP Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 63 AVNVT 67 A NVT Sbjct: 60 AANVT 64 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN KG+GFIT DG+ VFVHFSAIQ +GFKTL EGQ V F+ + +GP A N Sbjct: 4 GTVKWFNADKGYGFITGEDGND-VFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 66 VTA 68 V Sbjct: 63 VVP 65 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWFN KGFGFI ADG+ VFVHFSAI G+GFK+L EGQ V FE+++G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGND-VFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 KNVVKL 67 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KGFGFIT +GS VFVHFSAIQ +GFK+L EGQ V F++++ +GP AV Sbjct: 3 HGTVKWFNADKGFGFITRENGSD-VFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 65 NVT 67 NVT Sbjct: 62 NVT 64 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 3 KIKGQVKWFNESKGFGFITPAD-GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 I+G+VKWFN +KGFGFI +D+FVHFSAI+ +G+KTL GQ V FE+ G KG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 62 AAVNV 66 A+ + Sbjct: 61 QAIKI 65 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 42/69 (60%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M+ G VKWFNE+KGFGFI G DVF HFSAI +GFKTLAEGQ V+F + GQKG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PAAVNVTAI 69 P A N+ I Sbjct: 60 PQAENIVCI 68 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ +KG+GFI DG VFVHFSAI+GNGFKTL EGQ VEF I +G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGGD-VFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 ADVVKL 65 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 KIKG VKWF+ KGFGF+ P DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKW 100 Query: 62 AAVNVTA 68 A+NVT Sbjct: 101 KALNVTG 107 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G+ Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 153 KGAEATNVTG 162 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +G VKWFN KGFGFI G DVFVHFSAI G+K+L EGQ+VEFE+ +G +GP Sbjct: 1 MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 63 AVNVTAI 69 A NV + Sbjct: 60 AANVVKL 66 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 32/62 (51%), Positives = 44/62 (70%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+ KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE Q +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 VT 67 V+ Sbjct: 101 VS 102 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK--GPA 62 G VKWFN KGFGFI P DG D FVH SA++ G L EGQ V +++ ++ + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 63 AVNVTAI 69 A N+T + Sbjct: 110 ASNLTLV 116 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 39/66 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN KGFGFI G DVF H+S I GF+ L EGQ V F+I GQKGP Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 63 AVNVTA 68 A N+ Sbjct: 61 AENIVP 66 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ +G VKWFN+SKGFGFI G +D+FVHF AIQG+G+++L +G+ VEF + +G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 AAVNVTAI 69 A V + Sbjct: 62 QAEEVRRV 69 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN KGFGFI G DVFVH+SAI GF++L E Q V F++ G+ GP Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQ 59 Query: 63 AVNVTA 68 A NV+ Sbjct: 60 AENVSP 65 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKW++ KG+GFI DG D+FVH SAI G+ L EG VEF++ KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAE 59 Query: 65 NVTA 68 +V Sbjct: 60 HVRV 63 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVTAI 69 + + Sbjct: 63 VIVPV 67 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G VKWFN SKGFGFI +G+ VFVHFSAI+ G+K L EG V F++ G KGPAA Sbjct: 69 EGTVKWFNASKGFGFIAQDNGND-VFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVTAI 69 NV + Sbjct: 128 NVELL 132 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQK 59 MA +G VKWF+ KG+GFI +G D+FVH+S I FKTL GQ VEFE+ +G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPAAVNVTAI 69 G A NV + Sbjct: 61 GLHARNVVPL 70 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KG+GFITP G+ +FVHF AI+GNGFK+L EGQ V F GQKG Sbjct: 4 RQNGTVKWFNDEKGYGFITPESGAD-LFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQ 62 Query: 63 AVNVTAI 69 A V + Sbjct: 63 ADQVQVV 69 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWFN SKGFGFIT DG +++FVHF +I G G + L +GQ V F + KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 63 AVNVTAI 69 A NV + Sbjct: 139 AENVEPL 145 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA- 62 + G KWF+ +KGFGFITP DGS+D+FVH I+ GF++LA+ + VE+EI+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 63 AVNVTA 68 AVNV+ Sbjct: 71 AVNVSG 76 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 K+ G+VKWFN +G+GFI D +DVFVH +AIQ N +++ + + VEF++ G Sbjct: 28 KVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGP 87 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 88 KGLEAANVTG 97 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 63 GSEAANVTG 71 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 58 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 117 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 118 EKGAEAANVTG 128 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN+SKGFGFI +G +DVFVH S I +GFK+L EG V F+I+ GQKGPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 66 VTAI 69 VT + Sbjct: 63 VTVV 66 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 +I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 34 TRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAG 93 Query: 58 QKGPAAVNVTAI 69 KG A NVT + Sbjct: 94 AKGTEAANVTGL 105 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN---GFKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 61 TKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGE 120 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 121 KGNEAANVTG 130 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + K Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 60 GPAAVNVTA 68 G A NVT Sbjct: 81 GSEAANVTG 89 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 43/64 (67%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G+VKWFN +KG+GFI S D+F HFS++Q +G+KTL GQ V F+ + KG A+ Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NVTA 68 N+ Sbjct: 63 NIVP 66 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G V+WF++ KGFGFITP +G +D+FVH S+I+ +GF++L EG+ VEF+I G+ G Sbjct: 5 RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRT 64 Query: 62 AAVNVTA 68 AV+VT Sbjct: 65 KAVDVTG 71 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++G+VKWFN KG+GFI DG DVFVH+SAI+G+GFKTL EGQ VEFE+ + KGP Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 63 AVNVTAI 69 A V + Sbjct: 60 ASKVRKV 66 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 87.0 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 86 TKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIG 145 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 146 EKGNEAANVTG 156 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWF+ KG+GFIT +G VFVH+SAI+ GFKTL EGQ VEFEIQ+G+KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD-VFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 VNVTAI 69 +V + Sbjct: 60 AHVKVV 65 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQ--GNGFKTLAEGQNVEFEIQDGQKGPAA 63 G VKWFNE KG+GFI +G KDVFVHF + G G +L+EGQ V FE+ +GQKGP A Sbjct: 7 GSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGPQA 66 Query: 64 VNVTAI 69 NVT + Sbjct: 67 ENVTPL 72 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + G KWFN KG+GFI P +G D+FVH +AI+ GF++LAEG+ VEF+++ G Sbjct: 23 RQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRK 82 Query: 62 AAVNVTA 68 A NVT Sbjct: 83 KARNVTG 89 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWF+ KG+GFI G DVFVHFSAIQ GFKTL EGQ+VEFEI +G +GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 64 VNVT 67 NV Sbjct: 60 ANVI 63 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 86.3 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 31/57 (54%), Positives = 36/57 (63%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P G DVFVH SA+Q G TL EGQ V +EI ++ Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 86.3 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G+VKWFN KG+GFI+ +G VFVHFSAI G+KTLAEGQ VEF++ ++G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGDD-VFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 VNVTAI 69 VNV + Sbjct: 60 VNVRKV 65 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ +G Sbjct: 23 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEG 82 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 83 EKGAEAANVTG 93 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VK+FN KG+GFIT G +D+FVH+SAI +G+KTL EGQ V FE+ +G +G A Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 65 NVTAI 69 NV I Sbjct: 62 NVRGI 66 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ--GNGFKTLAEGQNVEFEIQDGQKGP 61 I G VKWF++ KG+GF+T D DVFVHFSAI GFKTL +GQ VEFE+ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 AAVNVTAI 69 A NV + Sbjct: 63 RAKNVRVL 70 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN++KGFGFITP G+ +FVHF +IQG GFK+L EGQ V F + +GQKG Sbjct: 4 RQNGTVKWFNDAKGFGFITPESGND-LFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQ 62 Query: 63 AVNVTAI 69 A V + Sbjct: 63 ADEVQVV 69 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 K G VKWFN +KG+GFI +DVFVHFSAIQ +G+KTL EG+ VEFE Q G KG Sbjct: 20 VKENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGL 78 Query: 62 AAVNVT 67 A NV Sbjct: 79 NAANVV 84 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +++G VKWFNE KG+GFI G KDVFVH SAI G G KTL EGQ V E+ G KG Sbjct: 3 TQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 AAVNVTAI 69 A +VT + Sbjct: 62 QAEDVTPL 69 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQDGQKGPAA 63 KG+VKWFN +KGFGFI+ D VFVH++AI+ NG ++ L E Q VEFEI +G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQGD-VFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 VNVTAI 69 NV + Sbjct: 62 CNVKKL 67 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 ++ G VKWFN++KGFGFITP G D+FVHF AIQG GFK+L EGQ V F GQKG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AVNVTAI 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +D+FVH SAI N +++ +G+ VEF++ +G Sbjct: 26 VKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEG 85 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 86 EKGHEAANVTG 96 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQD- 56 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ + Sbjct: 28 TLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEA 87 Query: 57 GQKGPAAVNVTA 68 +KG A NVT Sbjct: 88 AKKGSEAANVTG 99 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 +++ G VKWFN G+GFI D +DVFVH +AI N +++ +G+ VEF++ +G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 QKGPAAVNVTA 68 +KG A NVT Sbjct: 91 EKGNEAANVTG 101 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 6 GQVKWFNESKGFGFITPADGSK---DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G KWFN +G+GFITP S+ DVFVH S+I GF++L EG V+F + +KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AVNVTA 68 AV V Sbjct: 89 AVKVVG 94 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 + KG VKWF+ KGFGFITP+DG D+FVH S+I+ GF++LA ++VEF+++ G P Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73 Query: 62 AAVNVTA 68 A+ V+ Sbjct: 74 KAIEVSG 80 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 32/62 (51%), Positives = 41/62 (66%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VKWFN +KGFGFI P G+KDVFVH SA++ +G LA+ Q V F+I+ G+ G Sbjct: 53 MATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGRE 112 Query: 63 AV 64 A Sbjct: 113 AA 114 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+ G VKWFN KGFGFI +G +D+FVHF A+ L EGQ VE+ I G+KGP Sbjct: 76 AREVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGP 134 Query: 62 AAVNVTAI 69 A V + Sbjct: 135 QAEQVVIL 142 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I +G Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEG 78 Query: 58 QKGPAAVNVTA 68 KG A +VT Sbjct: 79 SKGLEAASVTG 89 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVTA 68 KG A VT Sbjct: 85 KGDEASEVTG 94 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 45/67 (67%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 213 VEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGR 272 Query: 62 AAVNVTA 68 A ++T Sbjct: 273 EASSITV 279 Score = 67.8 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 67 TAI 69 ++ Sbjct: 141 NSV 143 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 45/67 (67%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ V + +GQKG Sbjct: 174 TEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGR 233 Query: 62 AAVNVTA 68 A ++T Sbjct: 234 EAQSITV 240 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 37/63 (58%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G + + GQKGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 67 TAI 69 T++ Sbjct: 125 TSV 127 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 ++KG VKWFN G+GFI D S D+FVH SAI N ++L EG+ VEF + +G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPAAVNVTA 68 KG A VT Sbjct: 85 KGDEASEVTG 94 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 41/67 (61%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G V+WFN +GFGF+ PADGS D+FVH S I G+G + L EGQ V F + + G Sbjct: 52 ALRTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGD 111 Query: 62 AAVNVTA 68 A +V Sbjct: 112 QARDVRI 118 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG +KWFN +KGFGFIT DG++ VFVHF ++ + + GQ V + + + ++GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 65 NVTAI 69 +V+ + Sbjct: 119 DVSPL 123 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 39/61 (63%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VKWFN+ KGFGFITP G D+FVHF AIQGNGFK+L EGQ V F GQKG Sbjct: 4 RQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQ 62 Query: 63 A 63 A Sbjct: 63 A 63 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 2/67 (2%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGP 61 G VK+FN +KGFGFITP +G KDVFVH SA++ +G ++L +GQ V F+++ + KGP Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 62 AAVNVTA 68 AVN++A Sbjct: 63 KAVNLSA 69 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 29/60 (48%), Positives = 39/60 (65%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KG+GF+ P DG KDVFVH SA++ G+ +L EG V +E+ + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A G VK+FNE+KGFGFI D+FVH SA+ + E V F I+ G+KG Sbjct: 135 ALQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGL 190 Query: 62 AAVNVTAI 69 AVN+ + Sbjct: 191 NAVNIKLL 198 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQ-GNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 VKWF+ KG+GFI D +DVFVH+S IQ + FKTL Q+V FE+ DG KG A+ Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 66 VTAI 69 V + Sbjct: 65 VAPL 68 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G+ Sbjct: 23 KVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGE 82 Query: 59 KGPAAVNVTA 68 KG A NVT Sbjct: 83 KGHEAANVTG 92 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKT-LAEGQNVEFEIQDGQK 59 MA+ +G+VKWFN KG+GFI P DGSKDVFVH + + G G+ L EG+ V +E++ K Sbjct: 1 MAQ-RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPK 59 Query: 60 GPAAVNVTAI 69 G +A+NV + Sbjct: 60 GLSAMNVERL 69 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 43/62 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN +KG+GFI +D+F+H+S+I +G+KTL GQ+V F+ G++G AV Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 65 NV 66 ++ Sbjct: 63 DI 64 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDG 57 K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ +G Sbjct: 57 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEG 115 Query: 58 QKGPAAVNVTA 68 KG A NVT Sbjct: 116 GKGAEAANVTG 126 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 45/63 (71%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A + G VKWFN +KG+GFI P+ G KDVFVH SA+Q G ++L EGQ ++FEI+ Q G Sbjct: 31 AMLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGR 90 Query: 62 AAV 64 AA Sbjct: 91 AAA 93 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKWF+ +GFGFI P +G +++F H I G+KTL Q V ++++ G+ G AV Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 65 NVTA 68 N+ Sbjct: 64 NIIP 67 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + G VK+FN KGFGFI DG VFVHFS IQ +GFKTL EGQ V +++Q+ +G Sbjct: 24 VMLNGTVKFFNVDKGFGFIAGQDGVD-VFVHFSNIQADGFKTLNEGQTVSYDVQETSRGL 82 Query: 62 AAVNVTAI 69 A+NV AI Sbjct: 83 QAINVVAI 90 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 45/65 (69%), Gaps = 3/65 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KGPAA 63 G+VKWFN KG+GFI GS+DVF HFSAIQ GFK L EG VEFEI+ GQ KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 VNVTA 68 N+ Sbjct: 63 RNIVV 67 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 ++ G V WF E KG+GFI+ D +DVFVH +AI G ++ +G+ VEF++ G+ Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPAAVNVTA 68 G A NVT Sbjct: 127 WGTEAANVTG 136 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN KG+GFI DG +DVFVH+S I +G++ L EG+ VE+E+Q+G KG A Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 65 NVT 67 V Sbjct: 62 QVK 64 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFIT-PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 KIKG +WFN+ KGFGF+ S+D+F H + I+ GF++L EG+ VEF + G+KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 AAVNVT 67 A+ + Sbjct: 72 QAIEIV 77 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M ++ G KWFN KG+GFIT +G +DVFVH S I +GF++L E + VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59 Query: 61 PAAVNVTA 68 A++VT Sbjct: 60 KKAIHVTG 67 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF+T DG + VF+H SA+ G TL GQ VEF I +G+KG A+ Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 65 NVTAI 69 V + Sbjct: 61 QVRLL 65 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VK F+ + GFGFITP D +D+F+H S+++ + +++L + +E + G G Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 62 AAVNVTAI 69 AV+VTA+ Sbjct: 65 KAVDVTAL 72 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQ-GNGFKTLAEGQNVEFEIQDGQKGP 61 G VKWFN KGFGFI G DVFVHF+AIQ K L EGQ V+F++++G KG Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGL 59 Query: 62 AAVNVTAI 69 A NV + Sbjct: 60 QAANVVKL 67 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK--G 60 G VKWFN +KGFGFI P DGS DVFVH SA++ G + L +GQ + +E+ +K Sbjct: 2 MATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSGK 61 Query: 61 PAAVNVTA 68 +A N+ A Sbjct: 62 MSADNLQA 69 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQK 59 M++ +VKWF+ KG+GFI DG +D+FVHFSAI FK L + VEFEI QK Sbjct: 1 MSRKS-KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQK 59 Query: 60 GPAAVNVTAI 69 G A NV I Sbjct: 60 GMQAKNVCEI 69 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK--G 60 G VKWFN +KGFGFI P DG +DVFVH SA+ G L EG VE+E++ ++ Sbjct: 56 MASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGK 115 Query: 61 PAAVNVTA 68 AA ++ Sbjct: 116 LAATSIVV 123 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK- 59 M G VKWFN +KGFGFI P G +D+FVH SA++ G L EGQ V+F+++ ++ Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRS 238 Query: 60 -GPAAVNVTA 68 +A N+ Sbjct: 239 GKTSATNLKI 248 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 40/64 (62%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWFN +KGFGFI+ D+F H+S I+ +G+++L GQ V+FE+ KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VTAI 69 + I Sbjct: 64 IIPI 67 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DG+ DVFVH SA++ G ++L EGQ V ++I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 3/70 (4%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ-- 58 MA+ GQVK+FN KGFGFI P DG D+FVH SA+Q +G LA+ Q V +E + + Sbjct: 13 MAQ-TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRG 71 Query: 59 KGPAAVNVTA 68 KGP AVN+T Sbjct: 72 KGPKAVNITI 81 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 81.3 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWF+ ++G+GF+ P +G DVF+H S + L EG +EFEI++ +KG AV Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 65 NVTAI 69 N+ A+ Sbjct: 60 NIEAL 64 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF+T DG + VFVH SA+ G +L GQ VEF + +G++G A+ Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 65 NVTAI 69 +V + Sbjct: 65 SVRTL 69 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQD-GQKG 60 K KG V WFN +KGFGF+T DG DVFVH S I GF++L + + VEFE++ G Sbjct: 42 VKYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGR 101 Query: 61 PAAVNVTA 68 AV VT Sbjct: 102 YKAVKVTG 109 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +G+ KWF+ +K +GF+TP DGS DVFVH I+ G+++L + VE++ Q +KG A Sbjct: 63 YRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREA 122 Query: 64 VNVTAI 69 VT + Sbjct: 123 TTVTGV 128 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 37/62 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K G VK+FN KGFGFI DG D FVH SA++ G +L EG + FE++ ++G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AV 64 A Sbjct: 294 AA 295 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 29/61 (47%), Positives = 37/61 (60%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VK+FN KGFGF+ DG +DVFVH SA++ G LAEGQ + F + D +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 65 N 65 N Sbjct: 197 N 197 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQD--GQKG 60 + G KWFN SKG+GF+ +D+FVH S + GF++L EG+ V + IQ+ KG Sbjct: 52 RYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKG 111 Query: 61 PAAVNVTA 68 A V+ Sbjct: 112 REAYAVSG 119 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 + G+VKWFNE KGFGFI+ DG KD F+HFS I GFKT+ EG+ VEF+I+DG+KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 64 VNVT 67 NV Sbjct: 60 TNVV 63 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 41/68 (60%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +++G VKWF + KGFGF+T DG KDVFVH S ++ G ++L G+ V + + KG Sbjct: 131 VELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGR 190 Query: 62 AAVNVTAI 69 A + + Sbjct: 191 EATWIQLL 198 Score = 66.6 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++ VKWFN KGFGF+ PADG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 VNVTAI 69 + + + Sbjct: 103 IRLVDV 108 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 37/67 (55%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I G VKWF+ KG+GFI P +G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AVNVTAI 69 A+ V + Sbjct: 97 AIRVVDV 103 Score = 63.9 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ + +G KG + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 67 TA 68 Sbjct: 197 AP 198 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAI----QGNGFKTLAEGQNVEFEIQDGQK 59 I G+VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I G K Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 60 GPAAVNVTAI 69 G A NV+AI Sbjct: 89 GNEAANVSAI 98 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--KG 60 + G VK+F KGFGFITP +G DVFVH SA++ +G TL GQ + FE + + KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 61 PAAVNVTA 68 P AV + Sbjct: 181 PKAVELRL 188 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G V WF+ KGFGFITP D S VFV F AI+ G++TL G V + ++ + GP AV Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 65 NVTA 68 V Sbjct: 113 AVRP 116 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-FKTLAEGQNVEFEIQ-DGQK 59 + +G+V F++ KGFGFI P DG +D+FVH SAI+ +G +++LAE VEF + Sbjct: 12 VRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDN 71 Query: 60 GPAAVNVTA 68 AV+VTA Sbjct: 72 KYQAVDVTA 80 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQG--NGFKTLAEGQNVEFEIQDGQKGPA 62 +G V+WF+ +GFGF+ DG+ D+FVH S I G +G ++L EGQ+VEFEI +G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AVNVTA 68 A V Sbjct: 63 ARRVQI 68 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 V W++ KGFGF+TP G D FVH ++ G G L EG V F + G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 67 TAI 69 + Sbjct: 223 RVV 225 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G V ++ +GFGFITP G D+FVH S ++ L EG V F+++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREGQ--ELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 G V W+ +KG+GF+TP G ++F H SAI G G +AEGQ V F + +G+KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 37/62 (59%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G VK+FN KGFGFI DG D FVH SA++ G L EG ++FE++ ++G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AV 64 A Sbjct: 144 AA 145 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 37/63 (58%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKW+N KGFGFI G KDVFVH + + +G L+EGQ V ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 VTA 68 + Sbjct: 233 IEV 235 Score = 68.5 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 I+ VKWFN KGFGF+ +DGS DVF+H A++ G +++ G + + GQKG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 64 VNVTAI 69 V + Sbjct: 126 TEVLEV 131 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK-GPAA 63 G VKWFNE+KG+GFI P +G KDVFVH SA++ G + L EGQ + +E+ ++ G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 64 V 64 Sbjct: 63 A 63 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE 53 +++ G KWFN GFGFI+ P D + DVFVH S + GF++L EG+ +EF Sbjct: 1 LSQGSGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFS 60 Query: 54 IQDGQKGPAAVNVTA 68 + KG AV V+ Sbjct: 61 FKKSSKGLEAVRVSG 75 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 41/67 (61%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +I+G VKWF+++KG+GFIT G +DV +H S ++ +G T EG V E + +KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AVNVTAI 69 A + + Sbjct: 73 ATRIINL 79 Score = 63.9 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQ + G KG A + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 67 TA 68 Sbjct: 168 EP 169 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G+VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ+VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAADVIA 68 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 5/70 (7%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDGQ 58 ++G+VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ +G+ Sbjct: 66 LQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGK 125 Query: 59 KGPAAVNVTA 68 GP A NVT Sbjct: 126 NGPEAANVTG 135 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQKG 60 G VKWFN G+GF+ D +DVF+H +AI N +++ +G+NVEF++ +G+KG Sbjct: 27 SGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKG 86 Query: 61 -PAAVNVTA 68 P A NVT Sbjct: 87 LPEAANVTG 95 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKT------LAEGQNVEFEIQ 55 A+ +G+VKWFN +KGFG+ITP DG DVFVH SA++ GF+ +G +VEF+++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVE 68 Query: 56 D---GQKGPAAVNVTAI 69 + AV VT I Sbjct: 69 HESPTDERLKAVCVTGI 85 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 +G +KWFN +KGFGFI DG++ VFVH+ ++G +++ +GQ V + ++ +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVTAI 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 ++KG VK F+ + GF FITP DGS+D+F+H S+++ +G+++L + +E + G Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 62 AAVNVTA 68 AV+VTA Sbjct: 65 KAVDVTA 71 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 MA + G+V F+E +G+GFI P DGS DVFVH + + G+ + L G VE++ + ++G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PAAVNVTA 68 P AV V Sbjct: 64 PKAVLVRV 71 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ-- 58 MA+ G VK+FN KGFGFI P +G D+FVH SA+Q +G L+E Q V F+ + + Sbjct: 1 MAE-TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRG 59 Query: 59 KGPAAVNVTA 68 KGP AVN+ Sbjct: 60 KGPKAVNLQI 69 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 78.2 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVH--------FSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN KG+GFITP +G DVFVH S + +GF++L G+ V F I+ Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 QKGPAAVNVT 67 +G A V Sbjct: 71 PEGNEATAVV 80 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 39/67 (58%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VK + + +G+G+ITP G +DVFVHF+ I GFK L +G+ V + + G K P Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 63 AVNVTAI 69 A V I Sbjct: 61 AAQVQPI 67 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE 53 + + G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 27 VLRGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFT 86 Query: 54 IQDGQKGPAAVNVTA 68 + KG ++ VT Sbjct: 87 FKKSSKGLESIRVTG 101 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQKGP 61 + G+V F++ KGFGFI P G KD+FVH SAI+ + G++TL E VEF I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKY 72 Query: 62 AAVNVTA 68 AV+VTA Sbjct: 73 QAVDVTA 79 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWFN +KGFGFI G +++FVHF A+Q G ++L G V F+ + +G Sbjct: 10 QQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 63 AVNV 66 A NV Sbjct: 69 ADNV 72 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AA 63 G VKWFN +KGFGFI P DG KDVFVH SA++ G K L++ Q + +E+Q G+ G +A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 64 VNVTAI 69 ++ + Sbjct: 78 GDLRLL 83 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VKWF+ ++GFGFI DV VHFS ++ +G +TL EG + E+ +G A Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95 Query: 66 VTAI 69 + AI Sbjct: 96 ILAI 99 Score = 58.9 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 VKWFN KG+GF+ ++D+F+H ++ G L ++ I +G+KGP AV Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVE 194 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58 +G VK+F KGFGFI P DG +DVFVH++ I+ +G FK L EG VE+ Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 59 KGPAAVNVTAI 69 KG A +V + Sbjct: 61 KGTQAKDVVKL 71 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PA 62 +G KWF+ KGFGFIT DG D+FVH + I+ GF+ LAEG++VEF +Q G G Sbjct: 88 QRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRK 146 Query: 63 AVNVTA 68 AV+VT Sbjct: 147 AVSVTG 152 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 33/68 (48%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A+I G V F KGFGFITP +G + F H S + G + G + F KG Sbjct: 235 AEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGL 294 Query: 62 AAVNVTAI 69 AA N+ + Sbjct: 295 AAHNIRKL 302 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G++ F+E +G+GFI P +G +DVF+H + + + + L G VEF++++G +G A Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 66 VTA 68 V Sbjct: 68 VRI 70 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G VK+F+ KGFGF+ G KDVFVH A++ +G KTL GQ V G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 VNVTAI 69 V I Sbjct: 195 DTVAII 200 Score = 68.9 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 43/68 (63%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 A + VKWFN SKGFGF+ P+DGS D F+H SA++ G +AEG + ++ GQ+GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 AAVNVTAI 69 V V + Sbjct: 107 QVVMVHEV 114 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 + +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G+KG Sbjct: 132 VECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGL 191 Query: 62 AAVNVTAI 69 +++ + Sbjct: 192 EVLSIRLV 199 Score = 50.1 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 V WFN KGFGF+ DG++ ++ ++ +G + + EG ++ I++ +G V Sbjct: 47 VMWFNAGKGFGFVKLLDGTEA-YLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 68 AI 69 I Sbjct: 106 EI 107 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK--GPAAV 64 VKWFN +KGFGFI P +G D+FVH SA++ G + L EGQ V +E++ ++ +A Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 65 NVTAI 69 N+ + Sbjct: 175 NLRIL 179 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 39/54 (72%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK 59 G VKWFN +KGFGFI P DG +DVFVH +A++ +G L EG V +E+++ ++ Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 75.9 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 34/67 (50%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G V F+ KG+GFI P G +DVF+H S + + L G VEFE G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 63 AVNVTAI 69 A+ V + Sbjct: 61 AMTVNLL 67 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQG---NGFKTLAEGQNVEFEIQDGQKGPA 62 G+VKW+N KG+GFI D +DVFVH SAI K+L E ++V F++ G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AVNVTA 68 A+NVT Sbjct: 65 AMNVTG 70 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 44/68 (64%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KG+VKWF++ G+GFI+P DG D++VH +AI K+L GQ+VEF + G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PAAVNVTA 68 P+A +V A Sbjct: 61 PSAEDVIA 68 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWFN+ KGFGFI P +G DVFVH + ++ +G TL E V++++ + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 65 NVTAI 69 N+ + Sbjct: 69 NIQLL 73 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+VKWF+ KG+GF+ G +D+FVH S ++G+ +L +G VE+E+ ++GP Sbjct: 133 REQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPN 190 Query: 63 AVNVTAI 69 A V + Sbjct: 191 ARRVRVL 197 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 5 KGQVKWFNESKGFGFIT-------PADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 58 QKGPAAVNVTA 68 KG ++ VT Sbjct: 117 SKGLESIRVTG 127 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN--GFKTLAEGQNVEFEIQDGQKG 60 K +G +WF++ KG+GFI ADG KD+FVH+S+IQ G KTL E VEF +++G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PAAVNVTAI 69 AV+V + Sbjct: 64 AQAVDVVVV 72 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 1/62 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN-GFKTLAEGQNVEFEIQDGQKGPAA 63 KG++K+F+ S+GFGFI P DGS+DVF+H + I G + L EGQ +E+E + +KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 64 VN 65 +N Sbjct: 63 LN 64 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 36/64 (56%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VK F+ + GFGFI FV ++AI+ G+K+L GQ V +++ G+KG Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQ 60 Query: 63 AVNV 66 +NV Sbjct: 61 CINV 64 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 7/75 (9%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGS----KDVFVHFSAIQGNG-FKTLAEGQNVEFEIQ 55 M+K++G VKWF+ KG+GF+ P + +++FVH ++IQ G ++TL E +EF+++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 DGQK--GPAAVNVTA 68 + A+NVTA Sbjct: 61 KEAESGKFKAINVTA 75 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWF+ KG+GFI +G + FVH S I GF+ L G+ V + ++ +KG A+ Sbjct: 14 HGTVKWFDPVKGYGFIAGDNGKET-FVHQSDILMRGFRHLETGERVSYRVKATEKGDKAI 72 Query: 65 NVT 67 +V Sbjct: 73 DVI 75 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +G V F++ KG+GFI P +G +DVFVH + + G TL G V F++ DG +G Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLK 59 Query: 63 AVNVTA 68 A +V+ Sbjct: 60 AYDVSL 65 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Query: 5 KGQVKWFNESKGFGFITPA-------DGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 58 QKGPAAVNVTA 68 KG ++ VT Sbjct: 95 SKGLESLQVTG 105 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 K+KG VKWFN+SKG GFI + DVFVH+ +I G KTL +GQ V F I + G Sbjct: 4 KLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AVNV 66 A V Sbjct: 63 ASEV 66 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G V F++ +GFGFI S+DVFVH I+ +L+ GQ VEF+ + KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQQ--SLSPGQKVEFDTEQTDKGLSA 58 Query: 64 VNVTA 68 +NV Sbjct: 59 INVIP 63 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + +G+V WFN+ KGFGFIT DG DVFVH++ I +GF++L G+ V + + D + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AVNVTA 68 AV+V Sbjct: 61 AVDVHL 66 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A+ V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 67 TAI 69 + Sbjct: 195 RPL 197 Score = 68.9 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G++KWF+ KG+GF+ +G DV +H +A++ +G EG V E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 Query: 61 PAAVNVTAI 69 V ++ Sbjct: 90 WQVFRVISL 98 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGS-KDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 K+ G +KWF+ +KG+GFI P D+ +H ++++ +GF+T EG + E++ G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 AAVNV 66 V Sbjct: 85 QCFRV 89 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AAV 64 G VK+FN KG+GFI DGS D FVH +A+Q G TL + Q V +E++ G+ G +A+ Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 65 NVT 67 N+ Sbjct: 86 NLQ 88 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 +I G +K +N+ KGFGFI P++G +D+FVH S G G+++ F + Q G Sbjct: 10 TRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQDGK 68 Query: 62 -AAVNVT 67 A+NV Sbjct: 69 NKAINVQ 75 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G+V F+E +G+GFI P G DVFVH + + G+ + L G VE+E + ++GP Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 63 AVNVTAI 69 A+ V + Sbjct: 60 ALTVRVL 66 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 42/67 (62%) Query: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP 61 I G+VKWFN +K FGFI +G KDVFVH SA+ G L EGQ+V F+++D Sbjct: 3 TNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKI 62 Query: 62 AAVNVTA 68 +AVN+ Sbjct: 63 SAVNLRI 69 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF++ DG +DV+V SA+ G + L GQ VEF + G++GP A+ Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 65 NVTAI 69 ++ I Sbjct: 74 SLKLI 78 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF-KTLAEGQNVEFEIQDGQK 59 MA G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+++ F+I + +K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPAAVNVT 67 GPAA+NV Sbjct: 60 GPAAINVH 67 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +G+VK+FN +KGFGFI D ++D+FVH S + + E V+FE++ G+KG Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLN 56 Query: 63 AVNVTAI 69 AVNV I Sbjct: 57 AVNVEVI 63 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Query: 4 IKGQVKWFNESKGFGFITPADGSK-DVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G V WF+ KGFGFI PA+G + VFV FS+I+ +G++TL EGQ V F Sbjct: 15 YHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF--VRSAGRAE 72 Query: 63 AVNVTAI 69 AV V + Sbjct: 73 AVAVRPL 79 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP-AAV 64 G + +N+++GFGFI P G VFVH A QG + GQ V F ++ G G A Sbjct: 5 GVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPRP-QAGQRVRFAVEAGPGGRKRAC 63 Query: 65 NVTAI 69 V ++ Sbjct: 64 RVESL 68 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLA---EGQNVEFEIQDGQKG 60 +KG+VKWFN++KG+GFI D +K+ FVH+ +I N + L + + V F++ + KG Sbjct: 5 MKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PAAVNVTAI 69 A+N+ + Sbjct: 64 IQAINIIRV 72 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFE-IQDGQKGP 61 + +G + W++ KG+GFI P G DVFVH S+++ NG L G +E+E I Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 AAVNVTA 68 A+NVTA Sbjct: 169 QAINVTA 175 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 GQVKWFNESKGFGFITPA-------DGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPAAVNVTA 68 KG ++ VT Sbjct: 102 KGLESIRVTG 111 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G+VKW++ KGFGF++ +G +DV+V SA+ G + L GQ VEF I G++GP A+ Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 65 NVTAI 69 ++ + Sbjct: 111 SLKLL 115 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G VKWF+ +KGFGF+ +G D+ +H + ++ G ++A+G +E + Q+G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 65 NVTAI 69 V AI Sbjct: 72 QVHAI 76 Score = 61.2 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWF++SKGFGF S D+F+H ++ +G L G+ + + G++G A V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 67 TA 68 A Sbjct: 167 HA 168 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG VK+FN+SKGFGFIT KD FVH S + + EG VEFE+++G KG AV Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 65 NVTAI 69 NV + Sbjct: 59 NVRVL 63 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 6/71 (8%) Query: 4 IKGQVKWFNESKGFGFITPADG-SKDVFVHFSAIQGNG-----FKTLAEGQNVEFEIQDG 57 +KG+VKW++ +GFI D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 QKGPAAVNVTA 68 ++GP A NVT Sbjct: 66 KQGPEAANVTG 76 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG-QKGP 61 +I+G + +N+ +GFGFI P DG +VFVH SA +G + G+ + FEI+ + Sbjct: 2 RIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRP-QIGEPLSFEIELDKDRKK 60 Query: 62 AAVNVT 67 AV V+ Sbjct: 61 RAVGVS 66 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + +I G +KWF+ SKG+GF+ P +G DV +H + ++ +G++T EG + E KG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PAAVNVTAI 69 A + ++ Sbjct: 126 YQAFRIVSM 134 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 32/61 (52%) Query: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVT 67 VKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G KG A + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 68 A 68 Sbjct: 225 P 225 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 G VK+FN KG+GFI P DG+ D+F+H + + + VE+E+ G G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLA-DKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 62 AAVNVTAI 69 A V I Sbjct: 60 RAERVALI 67 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M G++ F+ S+GFGFI P DG DVFVH + I G L +G+ EF++ +G +G Sbjct: 1 MLVSIGKLVSFDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRG 59 Query: 61 PAAVNVTAI 69 P A+N++A+ Sbjct: 60 PKAINLSAV 68 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G + +FN+SKGFGFI + + FVH S + + + EG V ++++ G KG AVN Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 66 VTAI 69 V I Sbjct: 145 VKKI 148 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQD-GQKGP 61 + G++ + + +GFGFITP G VFVH SA+Q + G+ V +E+ + G KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGP 59 Query: 62 AAVNV 66 A+NV Sbjct: 60 RALNV 64 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 11/70 (15%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAI----QGNGFKTLAEGQNVEFEIQDGQ 58 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF------ 104 Query: 59 KGPAAVNVTA 68 G A VT Sbjct: 105 -GVIATKVTG 113 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G +K +N +G GFI G +++FVH SA +G + A G+ + FE++ + G Sbjct: 7 RFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRDGKK 65 Query: 63 -AVNVT 67 AV + Sbjct: 66 CAVRIH 71 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-PAAV 64 G +K +N+ KG+GFITP +G DVF+H A + + GQ + + G KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRLRAC 62 Query: 65 NVTAI 69 NV + Sbjct: 63 NVQYM 67 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG +V IQ +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AVNVTAI 69 AV V I Sbjct: 70 AVEVLEI 76 Score = 61.6 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWF+++KGFGF DVF+H ++ +GF LA G+ + + DG++G A + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +KG+VK F+E KG+GFIT + +FVH+S I+G + L + V I GQKGP Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 63 AVNVTAI 69 A +V + Sbjct: 60 AAHVRVL 66 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 + G V WF+ K +GFIT G +FVH A+ G+G + L EG+ V F + G KG Sbjct: 4 RSTGTVAWFDPEKSYGFITTHAG-ASLFVHRRAL-GDGRRWLVEGEEVSFVVVRGMKGDE 61 Query: 63 AVNV 66 A +V Sbjct: 62 ANDV 65 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 +G V+ F+ KG+G+I P+ G ++ VHFSAI L GQ V F+I ++GP Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 63 AVNVTA 68 A V Sbjct: 61 AERVQI 66 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 11/70 (15%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGF----KTLAEGQNVEFEIQDGQ 58 +I G VKWFN GFGFIT D +D+FVH S I K++ +G+ VEF Sbjct: 33 RITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF------ 86 Query: 59 KGPAAVNVTA 68 G A VT Sbjct: 87 -GLIASKVTG 95 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G+V F+ +G+GFI P G +DVF+H + + + G VEFEI+DG +G A Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 66 VTA 68 V Sbjct: 63 VRL 65 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 70.5 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 ++ G++K +N+ +GFGFI P G +D+FVH A + GQ V FE++ G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRP-TVGQAVTFEVELGPNGKK 60 Query: 62 AAVNVT 67 A +V Sbjct: 61 RARSVQ 66 >UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR46_CHIPD Length = 147 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G V +FN SKGFGFI + VF H + + + E V F + G +G A+ Sbjct: 83 TGVVSFFNLSKGFGFINDDSSKESVFFHMNQLAH----PVKEKDRVSFLREKGPRGFNAI 138 Query: 65 NVTAI 69 NVT I Sbjct: 139 NVTKI 143 >UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Psychrobacter RepID=Q1QDZ8_PSYCK Length = 253 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQK- 59 M G++K +N KG+GFI + S+DVF H +++ +++GQ V F + K Sbjct: 1 MPMQSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVRMAQ--PISKGQRVYFNSERNDKN 58 Query: 60 GPAAVNVT 67 A VT Sbjct: 59 QLRATEVT 66 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQD-GQKGPAA 63 +G++ +N+ +GFGFI+P DGS VFVH SA + G+ V + + KGP A Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAF-RSRHPLPEVGERVLYYLGPLSPKGPRA 85 Query: 64 VNVTAI 69 V I Sbjct: 86 SVVRYI 91 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M + +G +K +N+ KGFGFI P G +++FVH SA+ G + L G V F +G Sbjct: 1 MER-RGTLKSWNDDKGFGFIRPEQGGEELFVHISAVHGE-RRPLVGG-RVLFVAGRDAQG 57 Query: 61 -PAAVNVTA 68 A +V Sbjct: 58 RLRAEHVRL 66 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 6 GQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVN 65 G VK+FN SKGFGFI + K+ FVH S + + E V FE++ G+KG AVN Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 66 VTAI 69 V + Sbjct: 60 VKLV 63 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 KG VK F+ + +GFI FV + +I+ G+K L GQ V +++ G+KG Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQ 60 Query: 63 AVNV 66 +NV Sbjct: 61 CINV 64 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG + F++ +G+GFI P G DVFVH + G+ +A G V +E+ ++G Sbjct: 3 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLKVA 61 Query: 65 NVTA 68 +V Sbjct: 62 SVVL 65 >UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC17A Length = 165 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 K +G+++ ++++KG+GF+ P G F H A + + + G + +E++ + G Sbjct: 2 KYQGRIQQWDDAKGYGFVEPNGGGTRAFTHIKAFKQRSRRPVN-GDIIVYEVEQDRNGNH 60 Query: 62 AAVNVTAI 69 A N++ + Sbjct: 61 RACNISLL 68 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 ++G VKWF++ KG GFI + D F H S + G EG VEF+ ++GP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 64 VNVTAI 69 V + Sbjct: 58 ATVRIV 63 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 2 AKIKGQVKWFNESKGFGFITPAD----GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 +I G+VKWF+ KG+GFI P D KDV +H ++++ +G + EG + ++ Sbjct: 25 VRITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRR 84 Query: 58 QKGPAAVNVTAI 69 KG V + Sbjct: 85 PKGWQVAEVVDL 96 Score = 66.2 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 7 QVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNV 66 +VKWFN +KG+GF+ D+FVH ++ +G + L G+NV +G KG + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 69.7 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 G VK+FNESKG+GFI D ++D+FVH + + G T+ E V+FE+ DG+KG Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLN 57 Query: 63 AVNVTAI 69 AV V I Sbjct: 58 AVKVKKI 64 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 +KG V WFN+ KGFGFI + +D++VH+S + +GFKTL G+ V FE+ D P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 VNVTAI 69 V I Sbjct: 62 TAVRII 67 >UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12K82_SHEDO Length = 196 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 61 ++KG++ +++ KGFGFI P +VF+H SA++ + E + + + ++G P Sbjct: 2 RVKGKLVRWDDDKGFGFIRPNLTGPEVFLHISALRNASRRP-QEDDVITYALVADKQGRP 60 Query: 62 AAVNVTA 68 A N T Sbjct: 61 TAANATL 67 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 M KI G VK + KGFGFI G DVFVHFSAIQ + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIEL-KGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PAAVNVTAI 69 P A V + Sbjct: 60 PQAAAVEVL 68 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL 44 + KG VKWF+ KGFGFITP DG D+FVH S+I+ GF++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 5 KGQVKWFNESKGFGFITPAD---GSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQ--K 59 +G +KW+N KG+GFITP DVF+H SA+ G L EGQ V ++ Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 60 GPAAVNVTAI 69 +A N+ + Sbjct: 64 KYSAENLKLV 73 >UniRef50_A6C742 Cold-shock DNA-binding domain n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C742_9PLAN Length = 195 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGP- 61 + +G++ +++ KGFGFI+ + VFVH SA G+ + G V +E + G Sbjct: 2 RSQGKITDWDDEKGFGFISSQNDDSSVFVHISAFSGSARRP-QAGDPVSYETAHEENGKV 60 Query: 62 AAVNVT 67 A NV Sbjct: 61 RAENVR 66 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 4 IKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAA 63 IKG+VK + +GFGFI D K+ + H S + K + EG +V F IQ+ KGP A Sbjct: 370 IKGKVKKYVSERGFGFIK--DREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTKGPVA 427 Query: 64 VNVTAI 69 + + Sbjct: 428 KQIKVV 433 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 G++KWF+ +KG+GFIT DG DVF+H S + TL G + + + +A Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAH 62 Query: 65 NVTAI 69 +++ + Sbjct: 63 DLSLM 67 >UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V4_KINRD Length = 156 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 KG+V+ F++ +GFGFIT D ++VF H + + L EG +V+F + G +G A Sbjct: 6 KGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEAEDL-EGASVQFTLDQGDRGYKAT 64 Query: 65 NVTAI 69 +V + Sbjct: 65 DVRPL 69 >UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromonas RepID=A4SJX6_AERS4 Length = 219 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Query: 3 KIKGQVKWFNESKGFGFITP-----ADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDG 57 + +G++ +NE++GFGFITP ++FVH SA+Q +G G+ V +++ G Sbjct: 2 RYQGRIASWNEARGFGFITPEQEGGEQQGSELFVHISALQSDGSLP-NVGERVSYQLGTG 60 Query: 58 -QKGPAAVNV 66 P AV V Sbjct: 61 KDDKPRAVQV 70 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 + + G+V ++ ++GFGF+ P G DVF+H + I + +L G V F++++ +G Sbjct: 4 VVAVSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRG 62 Query: 61 PAAVNV 66 AVNV Sbjct: 63 AKAVNV 68 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.317 0.176 0.589 Lambda K H 0.267 0.0538 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 592,528,162 Number of Sequences: 3077464 Number of extensions: 24623664 Number of successful extensions: 54682 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1143 Number of HSP's successfully gapped in prelim test: 283 Number of HSP's that attempted gapping in prelim test: 52389 Number of HSP's gapped (non-prelim): 1739 length of query: 69 length of database: 1,040,396,356 effective HSP length: 41 effective length of query: 28 effective length of database: 914,220,332 effective search space: 25598169296 effective search space used: 25598169296 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 88 (38.1 bits)