10/01/2012 03:30:19 : INFO  : Run start: Tue Jan 10 03:30:19 GMT 2012
10/01/2012 03:30:21 : INFO  : Initialised job
10/01/2012 03:30:22 : INFO  : Renaming log file 'phyre2_20120110_033018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1724f93ca40c9247/phyre_20120110_033018.log'
10/01/2012 03:30:22 : INFO  : Initialised job:
Sequence
>batch____
MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKP
RVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLV
CNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGL
TVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVM
CYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK

10/01/2012 03:30:23 : INFO  : Checked sequence
10/01/2012 03:30:24 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 03:30:24 : INFO  : PSI-BLAST 3 iterations
10/01/2012 03:31:45 : INFO  : PSI-BLAST 5 iterations
10/01/2012 03:32:32 : INFO  : Finished PSI-BLAST
10/01/2012 03:32:33 : INFO  : Running Buildali to generate a3m file
10/01/2012 03:34:33 : INFO  : Converting to HMM
10/01/2012 03:34:34 : INFO  : Calibrating HMM
10/01/2012 03:34:45 : INFO  : Searching HMM database
10/01/2012 03:41:44 : INFO  : Finished buildali
10/01/2012 03:41:45 : INFO  : Predicting secondary structure
10/01/2012 03:41:48 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 03:41:49 : INFO  : Predicting Disordered regions
10/01/2012 03:41:50 : INFO  : Predicted Disorder (Disopred)
10/01/2012 03:41:51 : INFO  : Running memsat_svm check
10/01/2012 03:44:03 : INFO  : Globular protein
10/01/2012 03:44:04 : INFO  : Predicted Transmembrane (memsat_svm) ID '1724f93ca40c9247'
10/01/2012 03:44:05 : INFO  : Initialising fold library search
10/01/2012 03:44:06 : INFO  : Initialised search input
10/01/2012 03:44:07 : INFO  : Building Ensemble models
10/01/2012 03:44:09 : INFO  : Building hh.c2xsbA_.model.1.pdb
10/01/2012 03:44:16 : INFO  : Building c2xsbA_.1.pdb
10/01/2012 03:44:24 : INFO  : Building d2i4ra1.2.pdb
10/01/2012 03:44:30 : INFO  : Building d2cbia2.3.pdb
10/01/2012 03:44:36 : INFO  : Building c2cbjA_.4.pdb
10/01/2012 03:44:42 : INFO  : Building c2k0mA_.5.pdb
10/01/2012 03:44:48 : INFO  : Building c3tp9B_.6.pdb
10/01/2012 03:44:54 : INFO  : Building d1lzia_.7.pdb
10/01/2012 03:45:00 : INFO  : Building c1wv9B_.8.pdb
10/01/2012 03:45:07 : INFO  : Building c3fq6A_.9.pdb
10/01/2012 03:45:13 : INFO  : Building c2choA_.10.pdb
10/01/2012 03:45:19 : INFO  : Building c2xe4A_.11.pdb
10/01/2012 03:45:25 : INFO  : Building d1jaka1.12.pdb
10/01/2012 03:45:31 : INFO  : Building d1i0ea1.13.pdb
10/01/2012 03:45:37 : INFO  : Building c1ph4A_.14.pdb
10/01/2012 03:45:43 : INFO  : Building c1jb7A_.15.pdb
10/01/2012 03:45:49 : INFO  : Building c1qfmA_.16.pdb
10/01/2012 03:45:54 : INFO  : Building d1r8se_.17.pdb
10/01/2012 03:46:00 : INFO  : Building d1bc9a_.18.pdb
10/01/2012 03:46:05 : INFO  : Building c1yr2A_.19.pdb
10/01/2012 03:46:11 : INFO  : Building d1g0wa1.20.pdb
10/01/2012 03:46:26 : INFO  : Finished HH model building
10/01/2012 03:46:27 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 03:47:39 : INFO  : html domain output complete ID '1724f93ca40c9247'
10/01/2012 03:55:17 : INFO  : Run end  : Tue Jan 10 03:55:17 GMT 2012
