Phyre 2 alignment of P25666 with c2xe4A_

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Job Description | P25666
Confidence | 12.36% | Date | Thu Jan 5 11:42:14 GMT 2012
Rank | 11 | Aligned Residues | 40
% Identity | 28% | Template | c2xe4A_
PDB info | PDB header:hydrolase/inhibitor | Chain: A: PDB Molecule:oligopeptidase b; | PDBTitle: structure of oligopeptidase b from leishmania major
Resolution | 1.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | L | E | S | Q | K | I | T | L | N | N | N | I | V | D | D | D | Q | G | . | . | . | . | . | . | . | . | . | . | I | F | V | M | C | Y | Y | K | R | P | D | L | F | N | L | N | Y | L | G | R | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | I | A | A | A | E | F | L | V | N | A | K | L | T | T | P | S | Q | L | A | C | E | G | R | S | A | G | G | L | L | M | G | A | V | L | N | M | R | P | D | L | F | K | V | A | L | A | G | V | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  | G | G | G |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  | S |  |  |  |  |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 553 | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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