Phyre 2 alignment of P25666 with c2dlcX_

Return to main results | Retrieve Phyre Job Id

Job Description | P25666
Confidence | 3.82% | Date | Thu Jan 5 11:42:14 GMT 2012
Rank | 58 | Aligned Residues | 41
% Identity | 12% | Template | c2dlcX_
PDB info | PDB header:ligase/trna | Chain: X: PDB Molecule:tyrosyl-trna synthetase, cytoplasmic; | PDBTitle: crystal structure of the ternary complex of yeast tyrosyl-trna2 synthetase
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |  |  | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | Y | K | L | V | L | E | S | Q | K | I | T | L | N | N | N | I | . | . | V | D | D | D | Q | G | I | F | V | M | C | Y | Y | K | R | P | D | L | F | N | L | N | Y | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | Y | P | L | M | Q | A | L | D | E | Q | F | L | D | V | D | C | Q | F | G | G | V | D | Q | R | K | I | F | V | L | A | E | E | N | L | P | S | L | G | Y | K | K | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions