Phyre 2 alignment of P25666 with d1l8ra_

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Job Description | P25666
Confidence | 4.08% | Date | Thu Jan 5 11:42:14 GMT 2012
Rank | 49 | Aligned Residues | 24
% Identity | 17% | Template | d1l8ra_
SCOP info | Putative DNA-binding domain | Putative DNA-binding domain | Dachshund-homology domain
Resolution | 1.65

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 261 | . | . | . | . | . |  |  | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | L | F | R | C | F | . | . | R | S | N | T | L | G | A | K | M | Q | A | L | R | I | F | L | S | R
Query Conservation |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | F | L | K | H | L | V | G | G | L | H | T | V | Y | T | K | L | K | R | L | E | I | T | P | V | V
Template Known Secondary structure |  |  |  | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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