282 c1tndA_ Probab=98.50   E-value=4e-07  Score=67.94  Aligned_columns=162  Identities=19%

Q ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC------------------------------------------------
Q ss_conf             77999839879998999998568743305768------------------------------------------------
Q batch____       217 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIA------------------------------------------------  248 (454)
Q Consensus       217 i~I~ivG~pnaGKSSLiN~L~~~~~a~Vs~~~------------------------------------------------  248 (454)
                      +||.++|..++||||++..+---.....++..                                                
T Consensus         4 ikiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~   83 (323)
T c1tndA_           4 VKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADT   83 (323)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             89999738988888999999999678999899998799999999999999999998709998882136879998730134


Q ss_pred             -----------------------------------------------------------------CCCCCEEEEEEEECC
Q ss_conf             -----------------------------------------------------------------773220699999899
Q batch____       249 -----------------------------------------------------------------GTTRDVLREHIHIDG  263 (454)
Q Consensus       249 -----------------------------------------------------------------gtT~d~~~~~~~~~g  263 (454)
                                                                                       ..|..+.+..+.+++
T Consensus        84 ~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~~~  163 (323)
T c1tndA_          84 IEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKD  163 (323)
T ss_dssp             SCTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEEETT
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECC
T ss_conf             56222598999999998569899999873541042222456676678741545477864458985350241799997357


Q ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC-----------CCCHHHHHHHHHHHHH-HHCCCCEE
Q ss_conf             89999975883566405889999999998853898999984898-----------5898889988998875-20289689
Q batch____       264 MPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTT-----------TDAVDPAEIWPEFIAR-LPAKLPIT  331 (454)
Q Consensus       264 ~~i~l~DTpG~~~~~~~~e~~~~~~~~~~~~~aDlil~VvDas~-----------~~~~~~~~~~~~~~~~-~~~~~piI  331 (454)
                      .++.++|+.|.+...        +++.....+++.++||+|.++           .-..+...++...... ...+.|++
T Consensus       164 ~~~~~~DvgGq~~~R--------~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~ii  235 (323)
T c1tndA_         164 LNFRMFDVGGQRSER--------KKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIV  235 (323)
T ss_dssp             EEEEEEEECCSHHHH--------GGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCEEE
T ss_pred             EEEEEEECCCCCCCC--------HHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEE
T ss_conf             048899778987433--------236887369988999978114144222567403589999999998279687799789


Q ss_pred             EEEECCCCCCHHHHHHHHCCC---------------------------------CEEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf             998767778857766630799---------------------------------78998668899989999999998401
Q batch____       332 VVRNKADITGETLGMSEVNGH---------------------------------ALIRLSARTGEGVDVLRNHLKQSMGF  378 (454)
Q Consensus       332 iV~NK~Dl~~~~~~~~~~~~~---------------------------------~~i~iSAktg~Gi~~L~~~I~~~l~~  378 (454)
                      +++||.|+..++.....+...                                 -...++|....++....+.+.+.+-.
T Consensus       236 l~lNK~Dif~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d~~~i~~v~~~v~~~i~~  315 (323)
T c1tndA_         236 LFLNKKDVFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIK  315 (323)
T ss_dssp             EEEECHHHHHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             99325589987604488344067889978989999999999998523778973899998511068999999999999999


Q ss_pred             CCCCCCCE
Q ss_conf             46667740
Q batch____       379 DTNMEGGF  386 (454)
Q Consensus       379 ~~~~~~~~  386 (454)
                      ..-....+
T Consensus       316 ~~l~~~gl  323 (323)
T c1tndA_         316 ENLKDCGL  323 (323)
T ss_dssp             SCCCCCCC
T ss_pred             HHHHHHCC
T ss_conf             99986188