Job Description P42911 Confidence 42.29% Date Thu Jan 5 12:02:08 GMT 2012 Rank 1 Aligned Residues 45 % Identity 18% Template c2dmwA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1 Resolution UNK

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	E	R	M	Q	A	G	G	F	T	W	A	M	L	P	I	L	K	K	I	Y	K	D	D	K	.	.	.	.	.	.	.	.	.	P	G	L	S	A	A	M	K	D	N	L	E	F	I	N	T	H	P	N
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	E	R	S	R	A	F	N	F	L	N	E	I	K	K	R	F	Q	T	T	Y	G	S	R	A	Q	T	A	P	P	Y	A	M	N	S	E	F	S	S	V	L	A	A	Q	L	K	H	H	S	S	G	P	S
Template Known Secondary structure		S	S																				S						S	S		T	T	S	S																S		T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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