11/01/2012 20:50:28 : INFO  : Run start: Wed Jan 11 20:50:27 GMT 2012
11/01/2012 20:50:33 : INFO  : Initialised job
11/01/2012 20:50:34 : INFO  : Renaming log file 'phyre2_20120111_205027.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/phyre_20120111_205027.log'
11/01/2012 20:50:36 : INFO  : Initialised job:
Sequence
>batch____
MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLGVIKPIDTYIAEHQSHAQKIKKDIKWMQD
QASTHGLLGHPALTQPIKNILLEEAKRENLAITLENGPDNTLTIHPVTAPLENVSRWLTT
AQVTYGIVIEDLQFTLAGNEEITLRHLSFREQQ

11/01/2012 20:50:37 : INFO  : Checked sequence
11/01/2012 20:50:41 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 20:50:42 : INFO  : PSI-BLAST 3 iterations
11/01/2012 20:51:35 : INFO  : PSI-BLAST 5 iterations
11/01/2012 20:52:26 : INFO  : Finished PSI-BLAST
11/01/2012 20:52:29 : INFO  : Running Buildali to generate a3m file
11/01/2012 20:56:48 : INFO  : Converting to HMM
11/01/2012 20:56:50 : INFO  : Calibrating HMM
11/01/2012 20:57:00 : INFO  : Searching HMM database
11/01/2012 21:00:02 : INFO  : Finished buildali
11/01/2012 21:00:03 : INFO  : Predicting secondary structure
11/01/2012 21:00:14 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 21:00:16 : INFO  : Predicting Disordered regions
11/01/2012 21:00:21 : INFO  : Predicted Disorder (Disopred)
11/01/2012 21:00:24 : INFO  : Running memsat_svm check
11/01/2012 21:00:35 : INFO  : Globular protein
11/01/2012 21:00:36 : INFO  : Predicted Transmembrane (memsat_svm) ID '156f5206a625bbe3'
11/01/2012 21:00:38 : INFO  : Initialising fold library search
11/01/2012 21:00:42 : INFO  : Initialised search input
11/01/2012 21:00:45 : INFO  : Building Ensemble models
11/01/2012 21:00:49 : INFO  : Building hh.c1uv7A_.model.1.pdb
11/01/2012 21:01:06 : INFO  : Building hh.d1uv7a_.model.2.pdb
11/01/2012 21:01:19 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/hh.d1uv7a_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/d1uv7a_.2.pdb
11/01/2012 21:01:24 : INFO  : Building hh.c2rjzA_.model.3.pdb
11/01/2012 21:01:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/hh.c2rjzA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/c2rjzA_.3.pdb
11/01/2012 21:01:44 : INFO  : Building hh.c2rddB_.model.4.pdb
11/01/2012 21:01:57 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/hh.c2rddB_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/156f5206a625bbe3/c2rddB_.4.pdb
11/01/2012 21:02:02 : INFO  : Building c1uv7A_.1.pdb
11/01/2012 21:02:19 : INFO  : Building d1uv7a_.2.pdb
11/01/2012 21:02:37 : INFO  : Building c2rjzA_.3.pdb
11/01/2012 21:02:54 : INFO  : Building c2rddB_.4.pdb
11/01/2012 21:03:13 : INFO  : Building c2y9kG_.5.pdb
11/01/2012 21:03:31 : INFO  : Building d1bjna_.6.pdb
11/01/2012 21:03:50 : INFO  : Building c3gr5A_.7.pdb
11/01/2012 21:04:09 : INFO  : Building d1ppjc2.8.pdb
11/01/2012 21:04:29 : INFO  : Building d1tp6a_.9.pdb
11/01/2012 21:04:49 : INFO  : Building d1dnla_.10.pdb
11/01/2012 21:05:07 : INFO  : Building c3hd7A_.11.pdb
11/01/2012 21:05:26 : INFO  : Building d1yioa1.12.pdb
11/01/2012 21:05:45 : INFO  : Building d2c0ra1.13.pdb
11/01/2012 21:06:03 : INFO  : Building d1x4pa1.14.pdb
11/01/2012 21:06:22 : INFO  : Building d1nrga_.15.pdb
11/01/2012 21:06:40 : INFO  : Building c1nrgA_.16.pdb
11/01/2012 21:06:59 : INFO  : Building d1t9ma_.17.pdb
11/01/2012 21:07:18 : INFO  : Building c2kncA_.18.pdb
11/01/2012 21:07:36 : INFO  : Building d1hywa_.19.pdb
11/01/2012 21:07:55 : INFO  : Building d1bccc3.20.pdb
11/01/2012 21:09:31 : INFO  : Finished HH model building
11/01/2012 21:09:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 21:10:40 : INFO  : html domain output complete ID '156f5206a625bbe3'
11/01/2012 21:21:05 : INFO  : Run end  : Wed Jan 11 21:21:04 GMT 2012
