12 c3n90A_ Probab=99.84   E-value=1.1e-21  Score=142.95  Aligned_columns=142  Identities=12%

Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCC
Q ss_conf             16688221665768056874134715778078955446765667556788248765757745787037760547245487
Q batch____        17 QGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNI   96 (442)
Q Consensus        17 ~~radLs~adL~~a~Fsga~L~~~nFsgadLs~a~f~~a~L~~anFs~A~L~~A~F~~a~L~~a~F~~a~L~~adFs~a~   96 (442)
                      .+.++|+++.|++++|+|++|.+++|++|+|.++.|.++.+.++.|.++.+.++.+..+.+.++.+.++.+.++.+.++.
T Consensus         3 ~~g~~f~~~~L~gadls~a~l~~a~l~~a~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (145)
T c3n90A_           3 KGGGPYGQGVTRGQDLSGKDFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVN   82 (145)
T ss_dssp             GGGCCCCHHHHTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCBCTTCB
T ss_pred             CCCCCHHHCEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             56687777420347556886678825340013865343210000124751222222110000111101233222222222


Q ss_pred             CCCCEECCCCC-CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             02657517745-7864237681577557786355707887034687888001736646413854368737
Q batch____        97 LDTVDFSQSQL-GHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNF  165 (442)
Q Consensus        97 L~~a~F~~a~L-~~anFs~a~L~~a~F~~A~L~~AnF~gA~L~~A~~~~F~~AdLs~A~f~ga~LsGanf  165 (442)
                      +.++.+.++.+ .++.|+++++.+++|.+|+|++|+|+++.+      ...+++|++|++.++.| |+|+
T Consensus        83 ~~~~~l~~~~~~~~~~f~~~~l~~a~fs~A~L~~adl~~~~~------~~~g~n~~~a~~~~~~l-~c~~  145 (145)
T c3n90A_          83 LTNANLEGATMMGNTSFKGSNITGADFTDVPLRDDQRVYLCK------VADGVNATTGNATRDTL-LCNL  145 (145)
T ss_dssp             CTTCBCTTCBCCSSCBCTTCBCTTCBCTTCCCCHHHHHHHHH------HCCCBCTTTCCBHHHHT-TTTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH------HHCCCCCCCCCCCCCCC-CCCC
T ss_conf             221122584001221124863217732677568530765455------42487756571364323-3789