Phyre 2 alignment of P32690 with d1zupa1

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Job Description | P32690
Confidence | 4.33% | Date | Thu Jan 5 11:50:14 GMT 2012
Rank | 67 | Aligned Residues | 25
% Identity | 16% | Template | d1zupa1
SCOP info | Ribonuclease H-like motif | Ribonuclease H-like | TM1739-like
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 350 | . | . | . | . | . | . | . | . |  | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | N | E | L | T | R | N | D | N | . | I | F | I | L | F | S | S | V | D | D | G | P | V | M | V | V
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | A | V | I | W | D | R | E | G | G | T | K | T | L | F | S | P | D | K | P | P | V | K | E | R | V
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | T |  |  |  |  | S |  | B | T | T | B |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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