Phyre 2 alignment of P32690 with c3nzlA_

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Job Description | P32690
Confidence | 3.66% | Date | Thu Jan 5 11:50:14 GMT 2012
Rank | 82 | Aligned Residues | 30
% Identity | 10% | Template | c3nzlA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:dna-binding protein satb1; | PDBTitle: crystal structure of the n-terminal domain of dna-binding protein2 satb1 from homo sapiens, northeast structural genomics consortium3 target hr4435b
Resolution | 1.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 178 | . | 180 | . | . | . | . | . | . | . |  | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |  |  | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Query Sequence |  | D | Y | S | D | I | F | W | N | E | D | . | L | D | G | Y | I | N | N | I | I | K | M | I | D | . | . | T | L | P | D | N | A | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | X | L | P | P | E | Q | W | S | H | T | T | V | R | N | A | L | K | D | L | L | K | D | X | N | Q | S | S | L | A | K | E | C | P
Template Known Secondary structure |  | S |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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