BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (246 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 506 e-142 UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 405 e-112 UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 376 e-103 UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ... 321 1e-86 UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil... 320 3e-86 UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ... 277 3e-73 UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ... 268 9e-71 UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03... 260 3e-68 UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ... 258 1e-67 UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter... 245 8e-64 UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ... 238 1e-61 UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro... 232 9e-60 UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ... 227 3e-58 UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ... 219 6e-56 UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ... 212 7e-54 UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith... 211 1e-53 UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro... 211 2e-53 UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella... 210 3e-53 UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ... 210 4e-53 UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick... 209 6e-53 UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ... 199 7e-50 UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G... 198 1e-49 UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI... 195 1e-48 UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ... 194 2e-48 UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ... 194 3e-48 UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ... 192 6e-48 UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur... 190 3e-47 UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ... 189 9e-47 UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami... 185 1e-45 UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30... 182 1e-44 UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ... 182 1e-44 UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ... 181 3e-44 UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte... 180 5e-44 UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34... 178 1e-43 UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac... 174 3e-42 UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur... 172 1e-41 UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma... 172 1e-41 UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp... 171 2e-41 UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad... 167 2e-40 UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s... 166 7e-40 UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ... 159 1e-37 UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ... 152 9e-36 UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria... 151 2e-35 UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ... 151 2e-35 UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re... 150 3e-35 UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ... 148 2e-34 UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68... 146 7e-34 UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ... 143 5e-33 UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma... 143 5e-33 UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ... 142 7e-33 UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ... 142 1e-32 UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25... 137 3e-31 UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ... 136 5e-31 UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ... 135 1e-30 UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ... 135 1e-30 UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ... 132 1e-29 UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ... 131 2e-29 UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne... 131 2e-29 UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot... 130 4e-29 UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc... 129 1e-28 UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein... 128 2e-28 UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto... 127 4e-28 UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a... 127 4e-28 UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ... 125 1e-27 UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ... 124 4e-27 UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or... 123 5e-27 UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11... 123 6e-27 UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ... 122 1e-26 UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM... 122 1e-26 UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group... 121 2e-26 UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera... 121 2e-26 UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur... 119 1e-25 UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ... 119 1e-25 UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ... 118 2e-25 UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo... 117 3e-25 UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re... 115 9e-25 UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo... 115 1e-24 UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ... 115 2e-24 UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph... 114 2e-24 UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ... 112 8e-24 UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ... 112 1e-23 UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N... 111 3e-23 UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7... 109 9e-23 UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales... 109 1e-22 UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ... 108 1e-22 UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12... 108 1e-22 UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq... 108 2e-22 UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho... 107 5e-22 UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 106 6e-22 UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10... 106 8e-22 UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L... 105 1e-21 UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat... 104 2e-21 UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ... 103 4e-21 UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS... 103 5e-21 UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ... 102 9e-21 UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar... 102 9e-21 UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=... 102 1e-20 UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido... 101 2e-20 UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep... 100 3e-20 UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne... 100 4e-20 UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc... 100 6e-20 UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod... 99 1e-19 UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula... 99 2e-19 UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ... 99 2e-19 UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo... 98 2e-19 UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra... 98 3e-19 UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14... 98 3e-19 UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI... 97 3e-19 UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe... 97 4e-19 UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell... 97 5e-19 UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ... 97 6e-19 UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 96 8e-19 UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ... 96 9e-19 UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter... 96 1e-18 UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ... 95 2e-18 UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ... 94 4e-18 UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob... 94 5e-18 UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT... 94 6e-18 UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto... 93 8e-18 UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ... 92 1e-17 UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon... 92 2e-17 UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or... 92 2e-17 UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 92 2e-17 UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 91 3e-17 UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha... 91 3e-17 UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 91 3e-17 UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc... 91 4e-17 UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ... 90 7e-17 UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte... 89 1e-16 UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402... 88 2e-16 UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 88 2e-16 UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido... 88 2e-16 UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 87 4e-16 UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT... 86 1e-15 UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM... 86 1e-15 UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ... 86 1e-15 UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 85 2e-15 UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic... 85 3e-15 UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ... 84 4e-15 UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 84 4e-15 UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc... 84 5e-15 UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 84 5e-15 UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc... 84 5e-15 UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ... 84 6e-15 UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr... 82 2e-14 UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta... 81 2e-14 UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudona... 81 3e-14 UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarin... 81 3e-14 UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo... 81 4e-14 UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ... 80 5e-14 UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano... 80 6e-14 UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus... 80 9e-14 UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi... 78 2e-13 UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD... 78 3e-13 UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 77 4e-13 UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor... 76 8e-13 UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ... 75 3e-12 UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 74 3e-12 UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 74 4e-12 UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pe... 74 5e-12 UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam... 73 8e-12 UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ost... 69 1e-10 UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ... 67 6e-10 UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H... 65 3e-09 UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 63 8e-09 UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group... 57 4e-07 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 57 5e-07 UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcu... 52 2e-05 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 52 2e-05 UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCM... 51 3e-05 UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria Rep... 50 6e-05 UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCM... 47 4e-04 UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8... 47 4e-04 UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1... 47 8e-04 UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 45 0.002 UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimo... 45 0.002 UniRef50_Q1VZT2 rRNA methylase n=1 Tax=Psychroflexus torquis ATC... 45 0.003 UniRef50_C6T8X9 Putative uncharacterized protein n=2 Tax=rosids ... 44 0.006 UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID... 43 0.008 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 43 0.010 UniRef50_B8DQP1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 42 0.014 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 42 0.022 UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamic... 42 0.023 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 42 0.025 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 41 0.030 UniRef50_A3XMS0 Putative tRNA/rRNA methyltransferase n=1 Tax=Lee... 41 0.034 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 41 0.042 UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 T... 40 0.058 UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 40 0.075 UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu... 40 0.077 >UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189 Tax=Proteobacteria RepID=TRMJ_ECOL5 Length = 246 Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust. Identities = 245/246 (99%), Positives = 246/246 (100%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA Sbjct: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL Sbjct: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 Query: 241 KGNKAE 246 KGNKAE Sbjct: 241 KGNKAE 246 >UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57 Tax=Gammaproteobacteria RepID=TRMJ_YERPA Length = 257 Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A Sbjct: 1 MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S EA + PVALVFGRERVGL Sbjct: 61 TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-NGEQVEHEETPYPL 179 TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L Q+ N E EE PYPL Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 VDDLERFY HLEQ L +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240 Query: 240 NK 241 +K Sbjct: 241 DK 242 >UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70 Tax=Gammaproteobacteria RepID=TRMJ_PHOLL Length = 241 Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust. Identities = 178/241 (73%), Positives = 210/241 (87%), Gaps = 1/241 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A Sbjct: 1 MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A + VA+VFGRERVGL Sbjct: 61 TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYH+ I NPEY SLNLAMAVQ+++YE+RMA+LA Q+ EQ + +E YPL Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DD+ERFY HLE L +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+ Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239 Query: 241 K 241 K Sbjct: 240 K 240 >UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Gammaproteobacteria RepID=Q080P3_SHEFN Length = 240 Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 158/239 (66%), Positives = 186/239 (77%), Gaps = 4/239 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L P +PD Q+IALAAGASD++ N Sbjct: 1 MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK E+ N PVA+VFGRE GL Sbjct: 61 TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA E + YPL Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTDE----YPLT 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 +LERF+ HLE TL TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++ Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKK 235 >UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2 Tax=Alteromonadales RepID=Q3IFI1_PSEHT Length = 241 Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 155/239 (64%), Positives = 186/239 (77%), Gaps = 2/239 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P + DS A ALAAGASDV+GNA Sbjct: 2 ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE GL Sbjct: 62 VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L Q + E ++T YP Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 E FYGHLE+TL TGFI + HPG VM KLRR+F RARPE E+NILRGIL SI + Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINKS 238 >UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae RepID=C9R390_AGGAD Length = 241 Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P D QAIALAAGA DV+ +A Sbjct: 1 MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++ +A+A CSLV+GTSAR R L +++PRECG K+VA A N VA+VFGRERVGL Sbjct: 61 VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL--ATQENGEQVEHEETPYP 178 TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L + + + YP Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +++LE F+ H EQ + GFI+ VM +LRRL+ RA E ELNIL G+L+++E+ Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQG---VMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237 Query: 239 QNK 241 + K Sbjct: 238 KLK 240 >UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 Tax=Gammaproteobacteria RepID=B3PDK4_CELJU Length = 286 Score = 268 bits (686), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 137/237 (57%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 NIRIVLV TSH GN+G ARAMK MGL L+LV P P +A+ AAGA+DV+ NA Sbjct: 9 FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG AEA VA+VFGRE GLT Sbjct: 69 VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180 NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L E H + P Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 LE +Y HLEQ L+ GF+ ++P Q M +LRRL+ R R + ELNILRG+L +++ Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQ 245 >UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24 Tax=Gammaproteobacteria RepID=Y380_HAEIN Length = 241 Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 129/239 (53%), Positives = 171/239 (71%), Gaps = 6/239 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P D Q+ AL+AGA +++ NA Sbjct: 1 MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSP-KSVDEQSYALSAGAENIVKNA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD+ DEA+ CSLV+GTSAR R L +++PREC K VA +A+VFGRER+GL Sbjct: 60 RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAYKG--KIAIVFGRERIGL 117 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L + E YP Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D L F+ + E+ + GFI+ VM KL+RL+ RA+ E ELNIL G+L+++E++ Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQG---VMRKLKRLYYRAKLEKNELNILNGMLSAVEKR 233 >UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Gammaproteobacteria RepID=A6VX19_MARMS Length = 260 Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 168/239 (70%), Gaps = 4/239 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P P +A + AAGA D++ NA Sbjct: 1 MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IV TL+EA+A CSLV+GTSAR RT P+++ REC + EA + VA+VFGRE GL Sbjct: 61 TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N+E+ +CH V I AN EY LN++ AVQ++ YE+ W+A Q N E + E YP Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEI---WMANQ-NKENYKKETPEYPHK 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++ FY HLE+TL FI +HPG+V++KL R F R+RPE QEL ILRG+LA+++++ Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQRE 235 >UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria RepID=Q5ZUP6_LEGPH Length = 257 Score = 245 bits (626), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 127/249 (51%), Positives = 168/249 (67%), Gaps = 7/249 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP PD +A +AAGA DV+ A Sbjct: 3 LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + +TLDEAL GC L++GTSAR R L P L P C ++ NT VA+VFGRE GLT Sbjct: 63 VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM L+ QV D Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA----SIE 237 ++E+FY HL++ + F++ ++P ++M ++RRLF R E E++ILRG+L+ S+E Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239 Query: 238 QQNKGNKAE 246 K N+++ Sbjct: 240 WARKDNRSD 248 >UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VS87_ALCBS Length = 261 Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 120/254 (47%), Positives = 172/254 (67%), Gaps = 15/254 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P P +A A A+GA DV+ A Sbjct: 1 MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP----VALVFGRE 116 + +++DEAL G +LV+GTSAR R +PWP L PR+ + + AN P +A++FGRE Sbjct: 61 QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT----QENGEQVEH 172 GLTN+EL++C+ HV++ ANPEY LN+A AVQ+I+YE+R+A L QE+ + E Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180 Query: 173 EETPYPLVDD-------LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225 P D+ + F HLE+ + +GF+ PGQVM ++RRLF RARP+ E Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240 Query: 226 LNILRGILASIEQQ 239 ++ILRG+L ++E++ Sbjct: 241 MSILRGVLVALEKK 254 >UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVJ6_CHRSD Length = 246 Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 121/241 (50%), Positives = 162/241 (67%), Gaps = 7/241 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLV+T H GN+G ARAMKTMGL++L LVNP PD++A LAAGA+DVI NA Sbjct: 1 MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119 +V+ + +A+ C VVG SAR R+LP P DP + + A + PVALVFGRER G Sbjct: 61 RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP--Y 177 LTN+E++ C + V+I ANPEY LNLA AVQ++AYEVR AW Q + +TP Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPAT---SQTPPSL 177 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 P D + F HL + L+ +GF+ + H + + LR LF RA+P +EL+ILRG+L+++E Sbjct: 178 PTRDQMAHFEAHLHEALVTSGFLTQPH-ARTEDHLRALFARAQPSRKELSILRGVLSTLE 236 Query: 238 Q 238 + Sbjct: 237 K 237 >UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCC9_KANKD Length = 277 Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 123/261 (47%), Positives = 169/261 (64%), Gaps = 22/261 (8%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P P +A+ ++GA DV+ NA Sbjct: 15 LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERV 118 +VDT++EALA C L++GTS+R+R LPWP+++PRE G +K EA PVA++FGRE Sbjct: 75 QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEA--RPVAIMFGREST 132 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE---------NGE- 168 GL NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A E + E Sbjct: 133 GLLNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAEL 192 Query: 169 ------QVEHEETPYPL--VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220 + EH++ L ++++ Y HLE T+ T F P + ++RR+ +AR Sbjct: 193 GYDAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKAR 252 Query: 221 PESQELNILRGILASIEQQNK 241 E+NILRG L+SI++ K Sbjct: 253 LNKGEVNILRGFLSSIDKYIK 273 >UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7P7_9GAMM Length = 253 Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++ A Sbjct: 15 MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D+LDEAL GC SAR R LP P+++PR+ + NT +A+VFGRE GL+ Sbjct: 75 VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++ + G E E D Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQREAITN--D 192 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 DL Y H E++L GF+ +P +M +++RLF RA + EL+I+ GIL + E + K Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252 >UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH Length = 260 Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61 +N+RIVLV TSH GN+GSVARAMKTMGL L LV P PD QA A A+ A DV+ A Sbjct: 12 ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWP-MLDPRECGLKSVAEAANTPVALVFGRERVGL 120 D LD ALAGC LV+G SAR R + +LD RE G + VAEA + PVAL+FGRER GL Sbjct: 72 RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL +C V I ANPEY SLNLA AVQV+ +EV MA G V Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMA------RGAGVVAPTRRSASA 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 D+E F+ HL + GF+R+++P +M +LR+LF RA P+ EL +LRG+LA++E Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242 >UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVG4_9GAMM Length = 263 Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 117/243 (48%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++RIVLVETSH GN+GS ARAMK MGL L LV P PD+QA ALA+GA D++ A + Sbjct: 20 DLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERAEVY 79 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L ALA C V GT+AR R + WP L R + VA A+ PVA++FG ERVGL+N Sbjct: 80 DDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGLSNR 139 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL C + I Y SLNLA AVQ++AYE+ +A T+ V P + Sbjct: 140 ELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRAA---M 196 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE---QQN 240 E FYGHL Q L GF++ +M +LRRLF RARP+ E+ ILRGIL +E Q + Sbjct: 197 EGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWAQMD 256 Query: 241 KGN 243 KG+ Sbjct: 257 KGD 259 >UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria RepID=Q2YB91_NITMU Length = 267 Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/243 (47%), Positives = 151/243 (62%), Gaps = 4/243 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +RIVL TSH GN+G ARAMKTMGL +L+LVNP PD +A A GA D++ A Sbjct: 24 LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + DTLDEAL+G L +AR R L + D R+ K + A VALVFG E GL Sbjct: 84 KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA---WLATQENGEQVE-HEETP 176 T E+ KC + I ANPEYSSLNLA AVQV+AYE+RMA L T + H Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D++E Y HLEQ +++GF+ P ++M ++RRLF RAR E +E+NILRGIL++ Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263 Query: 237 EQQ 239 E++ Sbjct: 264 EKR 266 >UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2 Length = 249 Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 113/244 (46%), Positives = 155/244 (63%), Gaps = 3/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NIRIVLVE SH+GN+GS ARAM MGLTNLWLVNP D +AIAL+ A++V+ NA Sbjct: 4 LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63 Query: 61 HIVDTLDEALAGCSLVVGTSARSR--TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 IV L EAL VVGTSAR R +LP + + + + ++ +A++FGRER Sbjct: 64 RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-PY 177 GL NEEL + H I +N Y+SLNLA AVQ++AYE+ + + E E+ Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V +L+ Y H E ++L +GF+ ++ PG VM+K+RRLF R+ ESQE+NILRG L S++ Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243 Query: 238 QQNK 241 + K Sbjct: 244 NKGK 247 >UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5 Length = 256 Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 121/240 (50%), Positives = 156/240 (65%), Gaps = 5/240 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P PD +A ALA+GA D++ +A Sbjct: 6 LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + LD AL GC V GTSAR R + WP + RE + +A+ AL+FGRER GLT Sbjct: 66 VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYP 178 N E+ +C V I EY SLNL AVQV+AYE+ MA L T + + V E E P P Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAAL-TAQPAQDVPAEDVPEQPAP 184 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++D+E FYGHL+ L +GF++E ++M +LRRLF RARP E+NILRGIL IE+ Sbjct: 185 -IEDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIER 243 >UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli RepID=A8PK88_9COXI Length = 239 Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 108/238 (45%), Positives = 152/238 (63%), Gaps = 5/238 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIVLV+T+ GN+G+ ARAMKTMGL L+LV P P A A+ A D++ +A Sbjct: 3 LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VD L+EAL C LV GTS R R W L PR K + +A++FG+ER GLT Sbjct: 63 VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEK-IMNHCQQKIAILFGQERCGLT 121 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L QE ++ P V Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFL--QEKN--IKKRTVPLADVK 177 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + FYG L++ L F++ N VM+KLRR+F+RA +S E+ IL+GI +++E++ Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235 >UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXZ7_HALHL Length = 249 Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 4/236 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L+ RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P P D +A+A AAGA DV+ A Sbjct: 3 LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L AL GC L G SARSR P L+ R +VA+ + +A VFGRER GL Sbjct: 63 RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL CHY V I +P+YSSLN+A +VQ++A+E+RMA A G E P V Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMAAAA---GGPVQGQAEEPPAAV 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D LERF+ HLE+ G++ ++P M +LR +F RA E+ +LRG+++ + Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHV 235 >UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT Length = 249 Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L ++IVLV T+H GN+G+ ARAMK MG L LV P P A + A D++ A Sbjct: 11 LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I +TL++A+A C LV+GTSAR R +PWP+L+P+E V VALVFGRE GL Sbjct: 71 EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--QVEHEETPYP 178 TNEEL C++HV I +P+YSSLNLA AVQ++ YE+R+A L+ E+ VE T Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKNYWDVELANT--- 187 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 E H+++ + F ++P +++ ++RR F R+ + E NI RG+ A+I++ Sbjct: 188 --QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQK 245 Query: 239 QNK 241 + K Sbjct: 246 KLK 248 >UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO Length = 282 Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/254 (45%), Positives = 156/254 (61%), Gaps = 13/254 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L ++RIV+V T+ N+GS RAMKTMGL+ L LV P P ALAAGA+D+I Sbjct: 13 LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVG 119 IV+TL +A+ C LV GTSARSRT+PWP+LD R KS++ N VA+VFGRE G Sbjct: 73 IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE---------QV 170 LTNEEL +YHV I N +Y LN+A A+QVI YE+RMA LA E+G+ Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192 Query: 171 EHEETPYPLV--DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228 E + PLV + +E+FY H+E+ L F+ +P + +LRRLF R + + E ++ Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252 Query: 229 LRGILASIEQQNKG 242 LRGI + ++ N G Sbjct: 253 LRGIFSRVQALNNG 266 >UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMU6_9PROT Length = 265 Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/245 (47%), Positives = 155/245 (63%), Gaps = 7/245 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L+ IRIVL TSH GN+G+ ARAMKTMG++ L LVNP PD +A+A AAGA D++G A Sbjct: 14 LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + TLD ALA V SAR R L P L R+ + VA A VAL+FG E GL+ Sbjct: 74 VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY---P 178 N E+Q+C V I A+P Y+SLNLA AVQ++ YE+R+A A V P+ P Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFA---GSPPVVTRTMPFASPP 190 Query: 179 LV-DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V D+ERFY HLE+ ++A+ F+ P +++ KLRRLF R ES E+NILRG+L ++E Sbjct: 191 AVHQDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVE 250 Query: 238 QQNKG 242 ++ G Sbjct: 251 RKLAG 255 >UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Gammaproteobacteria RepID=Q31I12_THICR Length = 268 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/245 (46%), Positives = 156/245 (63%), Gaps = 8/245 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L I+IV+VETSH GN+G+VARAMK MGL+ L LVNP P A A A+GA+DV+ +A Sbjct: 11 LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVA-EAANTPVALVFGRER 117 +V+TL++A+A C LVVG SAR R + WP LD R E +++V E + VA++FGRE Sbjct: 71 VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETP 176 GL+N EL KCHY I NP YSSLN+A AVQV YE+ MA + + E H+ Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMATDIKSVHEAEGYRHK--- 187 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D +E FY HL Q L F+ + M ++RRLF R++ + +E++ILRG+L + Sbjct: 188 LASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAA 247 Query: 237 EQQNK 241 ++Q K Sbjct: 248 QRQTK 252 >UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5A5_9PROT Length = 253 Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 119/244 (48%), Positives = 155/244 (63%), Gaps = 5/244 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L NIR+VL T+H GN+G+ ARAMK MGL+ L+L+NP PD QA A+AAGA DV+ NA Sbjct: 7 LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + ++DEAL G L VG +AR R + + PRE + V +A VAL+FG E GLT Sbjct: 67 VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEE + V I ANPE+SSLNLA AVQVI+YE+ +A +N + VE P Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVAA----QNYQPVEQSLQPAAH-Q 181 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +E F HLE+TL GF +P ++M +LRRL+ RARPE+ E+NILRGIL+ + N Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241 Query: 242 GNKA 245 KA Sbjct: 242 RLKA 245 >UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales RepID=Q473D9_RALEJ Length = 314 Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 11/242 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57 M +R VLVETSH GN+GSVARA+KTMG +L LV+P V+ A+A+A+GA DV+ Sbjct: 45 MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC---GLKSVAEAANTPVALVFG 114 A IVD+++ AL G + V +AR R P L PR+ G +S+A A +A VFG Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL----ATQENGEQV 170 ER GL N+ +++C I ANP Y+SLNLA AVQ+IAYE+R+A L A ++ + Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224 Query: 171 EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230 + P + +E +GHL+Q L A GF+ +P ++M +LRRL RA E +E+NILR Sbjct: 225 GYAGEPA-TAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILR 283 Query: 231 GI 232 GI Sbjct: 284 GI 285 >UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRV8_9GAMM Length = 239 Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 107/239 (44%), Positives = 145/239 (60%), Gaps = 9/239 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +R+V+V T + N+G+VARAMK MGL +L LV P P A AAGA DV+ N + D Sbjct: 1 MRVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALAD 60 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-----VALVFGRERVG 119 +++EA+A C VV TSAR R WPM + R+ S++EA VA++ G ER G Sbjct: 61 SVEEAIADCHWVVATSARRRGYEWPMSNARQ----SMSEAYRRSQEGQQVAILLGPERSG 116 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L ++ L+ C H I+ANP+Y LN+A A QV+ YE+ A A E E + YP Sbjct: 117 LDSDSLRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPK 176 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + +E FY HLE L GF+R HPG + KLRRL T+A+ E ELN+LRGIL++IE+ Sbjct: 177 HEAVEHFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIER 235 >UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14 Tax=Acinetobacter RepID=B7H3X7_ACIB3 Length = 279 Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 17/256 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIV+V T+ N+GS RAMKTMGL+ L LV+P P ALAAGA D++ Sbjct: 13 LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGL 120 IV+TL+EA+ C LV GTSARSRT+PWP+LD R +++ AA +A+VFGRE GL Sbjct: 73 IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-----------NGEQ 169 TNEEL +YH+ I N +Y LN+A A+QV+ YE+RM+ L +E G+ Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192 Query: 170 VEHEETPYPLV--DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227 ++ +E PLV +E FY HLE+ L F+ +P + +LRRLF R + + E + Sbjct: 193 MQWDE---PLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYH 249 Query: 228 ILRGILASIEQQNKGN 243 +LRGI + ++ G Sbjct: 250 LLRGIFSRVQALTSGK 265 >UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria RepID=B2SXQ6_BURPP Length = 353 Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/257 (41%), Positives = 152/257 (59%), Gaps = 21/257 (8%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58 + R VLVE SH GN+G+ ARA+KTMG + L LV+P V + D +AIA+A+GA DV+ Sbjct: 95 FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLA 154 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +AH+V TL +AL+G + +AR R P PR + +A + +ALVFG ER Sbjct: 155 SAHVVPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERT 214 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE------------- 165 GL+NE++++C I ANP YSSLNLA AVQV+AYE+R +L+ Sbjct: 215 GLSNEDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAA 274 Query: 166 -NGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224 GE V D++E + HLE L+A F+ +P ++M++LRRLF R+ E + Sbjct: 275 GEGEAVGARAAS----DEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLERE 330 Query: 225 ELNILRGILASIEQQNK 241 E+NI+RGI I ++K Sbjct: 331 EVNIVRGIAKHILLKSK 347 >UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria RepID=Q6SFH7_9BACT Length = 248 Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 149/243 (61%), Gaps = 14/243 (5%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +IVL TSH GN+GS ARA+KTMG T+L LVNP P ++A ALAAGA D++ NA IV Sbjct: 11 FKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATIVS 70 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 T+++AL L++G +AR R L + RE K +E+ + +AL+FG E GL+N+E Sbjct: 71 TIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSNDE 130 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM------AWLATQENGEQVEHEETPYP 178 ++ CH I +N +YSSLNLA A+Q+I YE+RM A + + + E V HE Sbjct: 131 VKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQLSEDNAIIQSSKKNELVTHEVQ--- 187 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 FY HLEQ L GF+++ ++M +LR LF R E E+NILRGIL I++ Sbjct: 188 -----NGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQK 242 Query: 239 QNK 241 + K Sbjct: 243 KIK 245 >UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1W4_9NEIS Length = 254 Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 9/241 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+NIR+VL SH GN+GS ARAMKTMGL+ L+LV P P +A LA+GA D++ +A Sbjct: 9 FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119 +V+TL EAL+ ++ ++R R L P+ PR+ + VA A + VALVFG E G Sbjct: 69 VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH--EETPY 177 L+ +E+++C+ V I NPEY SLNLAMAVQV+ YE+ G V++ E Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYEL------FSHTGVDVDYLRAEAES 182 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 D++E F GHL+QTL G+ + ++M +LR LF RA +E++ILRG L ++ Sbjct: 183 ATRDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQ 242 Query: 238 Q 238 + Sbjct: 243 R 243 >UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBE0_LARHH Length = 268 Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/241 (43%), Positives = 143/241 (59%), Gaps = 5/241 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+N+R+VL S N+GS ARAMKTMGLT L+LVNP PD +A LA+GA DV+ A Sbjct: 19 FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR-ECGLKSVAEAANTPVALVFGRERVG 119 + +L EAL G +L ++R R + P+ PR C A VALVFG E G Sbjct: 79 VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ EE +C+ V IA NP+Y SLNLA AVQV++YE+ + L + + + E Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYEL-FSQLDFPLDHLRFQTERASR-- 195 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++E YGHL+ TL GF + ++M +LR LF RA E QE++ILRGIL +E++ Sbjct: 196 -DEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254 Query: 240 N 240 Sbjct: 255 T 255 >UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34 Tax=Burkholderiaceae RepID=Q3JQS9_BURP1 Length = 346 Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58 + R VLVE SH GN+G+ ARA+KTMG + L LV P V + D +A+A+A+GA DV+ Sbjct: 62 FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLA 121 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +AH+V TL +AL G + +ARSR P L PR ++ + +ALVFG ER Sbjct: 122 SAHVVPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERT 181 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NE +++C I ANP YSSLNLA AVQV+AYE+R+A L E+ + Sbjct: 182 GLSNEHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLA 241 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D++ER + HLE L+A F+ +P ++M +LRRLF R E +E+NI+RGI I Sbjct: 242 QSDEIERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299 >UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum RepID=Q7NRY2_CHRVO Length = 244 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 148/248 (59%), Gaps = 9/248 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +QNIR+VL +H GN+GS ARAMKTMGL+ L+LV P V P +A ALA+GA D++ NA Sbjct: 1 MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGL 120 +V +L EAL+ ++ ++R R L P+ PR+ + +A A + VALVFG E GL Sbjct: 61 VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH--EETPYP 178 + EE+++C+ V I NP+Y SLNLAMAVQV+ YE+ G VE+ E Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYEL------FSHTGVDVEYLRAEGEAA 174 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +++ GHLEQ + G+ + + ++M ++R +F RA +E++ILRG +++ Sbjct: 175 TQSEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQR 234 Query: 239 QNKGNKAE 246 G + Sbjct: 235 TASGRSGD 242 >UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium MedeBAC49C08 RepID=Q4PK37_9BACT Length = 239 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 143/239 (59%), Gaps = 7/239 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + QN+ VLVETSH GN+G+ ARAM +MG+ NL LVNP P +++ A V+ A Sbjct: 3 IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERV 118 +I D L+EA+ +LV+GTSARSR++PWPM++ G K + E A V++VFG E V Sbjct: 63 NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLG-KIINESLARKEKVSIVFGNEAV 121 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NE+L KC +H+ I + E SSLNL+ AVQ++A+E+ + + + + E Sbjct: 122 GLDNEDLGKCDFHLQIPTS-EDSSLNLSHAVQIVAHEI---YKGSSSSDLFTQAREVELA 177 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 E+ H+E L F +P QV +LRRL R + + E+ ILRGIL+++E Sbjct: 178 SSQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236 >UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria RepID=A5CWV4_VESOH Length = 247 Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/239 (39%), Positives = 140/239 (58%), Gaps = 8/239 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +R+V+V T+ GN+G+ ARAMK M L+ L+LVNP P + A A A+GA DV+ +A Sbjct: 9 FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECG-LKSVAEAANTPVALVFGRERVG 119 + ++L+EAL G LV+G SAR R + W +D C ++ + VA++FG E+ G Sbjct: 69 VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LTN+EL C + I NP+Y SLN+A A+QV AY+ + E E V + Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQ-NYIYNTPTEFKENVSKLAS---- 183 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237 D+LE FY HL Q L + ++ H +M +LR FT+ P+ +E++I RGIL +I+ Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242 >UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples RepID=A4GJJ4_9BACT Length = 243 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/237 (39%), Positives = 132/237 (55%), Gaps = 10/237 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE SH GN+G+ ARA+K MG L LVNP K +A A A D++ N I Sbjct: 8 DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPML--DPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D A+ +L++ TSAR RT+PWP D +KS + T +VFGRE GL+ Sbjct: 68 KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R + +V +V Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVRE------VVS 181 Query: 182 DL--ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 +L E+ HL + L F QV ++ RL + R + E+ ILRG L+ I Sbjct: 182 NLENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238 >UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae RepID=Q2P2B7_XANOM Length = 254 Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 144/241 (59%), Gaps = 6/241 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 Q IR VLV T H GN+G+ ARAMKTMG++ L LV P D A +AGA DV+ A I Sbjct: 5 QCIRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPI 64 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121 TL EA+A C+LV+G +AR+R + L P E +++A+A+ VA VFGRER GLT Sbjct: 65 FATLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLT 124 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH----EETPY 177 N+ELQ CH V I ++P++SSLNLA AVQV+AYEVR+A LA E + P Sbjct: 125 NDELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPA 184 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 LE +G L TL F + P M KLRRL RA QE+ ++RGIL+ + Sbjct: 185 SHA-QLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQ 243 Query: 238 Q 238 + Sbjct: 244 R 244 >UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQ32_9BURK Length = 269 Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 99/245 (40%), Positives = 142/245 (57%), Gaps = 10/245 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK---PDSQAIALAAGASDVIG 58 L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P K +AI+LA+GASDV+ Sbjct: 7 LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRER 117 A I +TL EALA S+ SAR R L + P+E +++ + A VFG ER Sbjct: 67 QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW----LATQENGEQVE-- 171 GL+N+EL C+ V IAANP YSSLNL+ AVQ++AY +R W A + G + Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + V + H + + A F+ + P +V+ +L R+ + E +E+++LRG Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246 Query: 232 ILASI 236 + + Sbjct: 247 FFSDV 251 >UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ Length = 250 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 141/241 (58%), Gaps = 16/241 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGN 59 Q +R VLVETSH GN+GS ARA+KTMG +L LVNP + ++AIALA+GA DV+ Sbjct: 7 QFLRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLET 66 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118 A + +L++A+ CSLV+G ++R R P LD L S A VA+VFG ER Sbjct: 67 ATVSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERT 126 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-------LATQENGEQVE 171 GL NE L C + V + ANP+Y SLNLA A+ V AY +R + L + + + V+ Sbjct: 127 GLENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVD 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + P + LE H + L A G++ HP ++M + + LF R+R +E+++LRG Sbjct: 187 FAD-PIAVAAMLE----HWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRG 241 Query: 232 I 232 I Sbjct: 242 I 242 >UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales RepID=B1Y5A0_LEPCP Length = 252 Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 136/233 (58%), Gaps = 14/233 (6%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62 R +L+ TSH GN+G+ ARAMK MG +L LV P V + +A+A+GA+D++ A I Sbjct: 9 RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V TLDEAL G + T+ R P PRE L ++A A VA VFG ER G++N Sbjct: 69 VATLDEALEGIHVACATAMTPRDFGPPTSTPRE-HLPALA-AGGERVAFVFGSERYGMSN 126 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP---YPL 179 EE+ +C ++I P+Y SLNLA AVQ++AYE RMA G V TP Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMAL-----GGYDVS-ARTPAVQRAS 180 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 +D+++ H + TL+A GF+ P ++M +L++L RA +E++ILRGI Sbjct: 181 LDEVQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233 >UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae RepID=A1KUH1_NEIMF Length = 292 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 143/260 (55%), Gaps = 27/260 (10%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------------LVKPD------ 43 L NIRI+L TSH N+GS ARAMKTMGL L +V P + P+ Sbjct: 33 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92 Query: 44 --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 93 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDL-VSEL 151 Query: 102 AEAANT--PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 + AN VALVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 152 LQTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQ 211 Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219 + + +Q +H T + ++ H+E + GF + ++M +++ LF RA Sbjct: 212 TGSPMTHLQQEDHAATH----EQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRA 267 Query: 220 RPESQELNILRGILASIEQQ 239 ++++++ILRG ++ + Sbjct: 268 NTQTEDIDILRGFFNTVSHR 287 >UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W0D7_NEICI Length = 330 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 143/260 (55%), Gaps = 27/260 (10%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------------LVKPD------ 43 L NIRI+L TSH N+GS ARAMKTMGL L +V P + P+ Sbjct: 71 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130 Query: 44 --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDL-VPEL 189 Query: 102 AEAANT--PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 +AAN V LVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 190 LQAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQ 249 Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219 + + +Q +H T + ++ H+E + GF + ++M +++ LF RA Sbjct: 250 TDSPMTHLQQEDHAATH----EQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRA 305 Query: 220 RPESQELNILRGILASIEQQ 239 ++++++ILRG ++ + Sbjct: 306 NTQTEDIDILRGFFNTVSHR 325 >UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD Length = 255 Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 18/250 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD----SQAIALAAGASDVI 57 ++ ++V+ SH GN+GS ARA+KTMG +L LV P PD +A+ALA+GA+DV+ Sbjct: 5 FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPRY-PDMTSQPEAVALASGATDVL 63 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVAEAANTPVALVFG 114 A + TL+EALA +L +AR R L P D R E + +A + A+V G Sbjct: 64 ERARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLG 123 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEE 174 ER GLTN ++ C I ANPEYSSLN+A A+Q+ A+E+R A L + NG + Sbjct: 124 TERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALL--RANGATLLPAS 181 Query: 175 T---PYP-----LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226 T P P + ++ F H ++ L+ F+ HP ++M ++R LF+R+ E+ Sbjct: 182 TAQQPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEI 241 Query: 227 NILRGILASI 236 ++LRG+ ++ Sbjct: 242 DMLRGVCTAM 251 >UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC Length = 271 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/243 (38%), Positives = 129/243 (53%), Gaps = 10/243 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I+IVL TSHTGN+G+VARAMK MGL L LV+P D QA+A A A+D++ A VD Sbjct: 20 IQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQVD 79 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L +ALA V T+AR R L P++ R+ A + +++VFG ER GLTN+E Sbjct: 80 NLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTNQE 139 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + I ANP+Y LNL AVQ++AYE RMA T + Q + T Sbjct: 140 ISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMAH-GTARSAPQPNIDSTELATTAQWA 198 Query: 185 RFYGHLEQTLLATGFIRENHPGQ---------VMNKLRRLFTRARPESQELNILRGILAS 235 F L + L T F + +M +LR L RA P EL +++GI+ + Sbjct: 199 AFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIVRA 258 Query: 236 IEQ 238 + + Sbjct: 259 LTE 261 >UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55896_SYNY3 Length = 240 Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/227 (42%), Positives = 128/227 (56%), Gaps = 8/227 (3%) Query: 17 NMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEALAGCSL 75 N+G++ARAMK MGL L LVNP S +A +A A DV+ A +VD L AL Sbjct: 8 NVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATALGDRQR 67 Query: 76 VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIA 135 ++ TSAR R L PM PR+ L + A N ALVFGRE GLTNEEL + H V I Sbjct: 68 IIATSARERILQSPMETPRQ-ALPWLL-APNLKSALVFGREDSGLTNEELNQAHRFVRIP 125 Query: 136 ANPEYSSLNLAMAVQVIAYEVRMAWLATQEN----GEQVEHEET-PYPLVDDLERFYGHL 190 +P+Y SLNL+ AV V YE+ A LA + N G+++E T P L+ + HL Sbjct: 126 VHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLDSYCQHL 185 Query: 191 EQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 E+TLL + + M K RR++ RA S+E+ +LRGIL I+ Sbjct: 186 EKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQID 232 >UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas intermedia K12 RepID=C7HY98_THIIN Length = 260 Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 135/243 (55%), Gaps = 15/243 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAAGASDV 56 L + VLV TSH GN+G+ ARA+K MG NL LV P L +P++ +A A+GA DV Sbjct: 18 LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPET--LAFASGAEDV 75 Query: 57 IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVAEAANTPVALVF 113 + A + L +A+A C +VV SAR R P+ P + +S + VA VF Sbjct: 76 LKTAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRR--VAFVF 133 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 G ER GL+N ++ +C ++I ANP Y+SLNLA AVQVIA+E R + + Sbjct: 134 GSERFGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQA 190 Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 E+ +++ H+EQ LLA + N P +++ +L+RL +RA E+ ILRG+ Sbjct: 191 ESVAATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVC 250 Query: 234 ASI 236 ++ Sbjct: 251 TAV 253 >UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae RepID=A1VM17_POLNA Length = 311 Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/249 (38%), Positives = 135/249 (54%), Gaps = 28/249 (11%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62 R +L+ TSH GN+G+ ARAMKTMG +L LV P V + I A+GA DV+ NA I Sbjct: 40 RFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNARI 99 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------ECGLK----SVAEAANTP 108 V+TLDEAL G + + T+ R P PR E LK + A P Sbjct: 100 VETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQRP 159 Query: 109 --VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 VA +FG ER G+ NE++ +CH ++I +P++ SLNL AVQ+IAY+ R A Sbjct: 160 DSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF--- 216 Query: 167 GEQVEHEETPYPLVDDLERFYG---HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPES 223 G Q EE P + D G H E+ L+ GF+ P ++M +L +LF RA+ Sbjct: 217 GIQAAIEE---PRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSP 273 Query: 224 QELNILRGI 232 +E++ILRG+ Sbjct: 274 EEIHILRGV 282 >UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 Tax=Desulfuromonadales RepID=A1ALQ6_PELPD Length = 251 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 9/242 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 ++ IV+VE GN+G V RAMK MGL+ L LV + +++ A A D++ A + Sbjct: 10 DSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERAEL 69 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGL 120 D L ALA C+L VGT+ R +L P + L++ A+ + ALVFGRE GL Sbjct: 70 YDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQ-GDCRGALVFGREDSGL 128 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 T +EL C +H I + EY SLNL+ AV + YE+ A + G + E T Sbjct: 129 TTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKA--SDSPGGGRTEIPATSA--- 183 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 ++E + ++ +L GF+ E +PG +M LRR+ R+ +++EL ILRG+ + ++ Sbjct: 184 -EMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWAC 242 Query: 241 KG 242 G Sbjct: 243 SG 244 >UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI29_9SYNE Length = 304 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/280 (35%), Positives = 144/280 (51%), Gaps = 45/280 (16%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L IRIVLV + N+GSVAR MK GL+ L+LV+P ++A+ +A A DV+ A Sbjct: 15 LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPV---ALVFGRE 116 IV T+ +ALAGC + T+AR+R P LDP E L ++ + P+ AL+FG E Sbjct: 75 QIVPTIPKALAGCEYAIATTARTRGFNVP-LDPPETALPNLLTSNPQQPIRQTALLFGPE 133 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMA---------------- 159 GL+N+EL + I + YS+LNLA AV + YE+ R+A Sbjct: 134 DRGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIES 193 Query: 160 ---------------------WLATQENGEQV-EHEETPYPLVDDLERFYGHLEQTLLAT 197 L++ N + EHE+ P ++++ER+Y HLE LL Sbjct: 194 SLENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQV 253 Query: 198 GFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 G++ + M K+R+L RA P S E+ +LRG++ IE Sbjct: 254 GYLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIE 293 >UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria RepID=B8HLP3_CYAP4 Length = 262 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 127/248 (51%), Gaps = 29/248 (11%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L +RIVLVE + N+G+++R +K MGL L LVNPL P ++A +A A D++ A Sbjct: 12 LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRT-----------LPWPMLDPRECGLKSVAEAANTPV 109 V TL +AL GC ++ T+ R + LPW + P Sbjct: 72 RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWLL---------------GHPA 116 Query: 110 ALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169 AL+FGRE GLTN EL + I +P Y SLNLA AV V +YE+ A+Q E Sbjct: 117 ALIFGREDRGLTNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEP 174 Query: 170 VEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229 + ++LE +Y LE LL G++ + M K RRLF R++P E+ +L Sbjct: 175 IAPGGGELARFENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALL 234 Query: 230 RGILASIE 237 RGIL+ +E Sbjct: 235 RGILSQVE 242 >UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae RepID=B7A9R4_THEAQ Length = 244 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 98/245 (40%), Positives = 130/245 (53%), Gaps = 14/245 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL--VKPD--SQAIALAAGASDVI 57 L +R+VLVE N+G+VARAM+ GL L+LVNP V P +A LA A +++ Sbjct: 5 LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTL-PWPMLDPRECGLKSVAEAANTPVALVFGRE 116 A VD+L EALA LVV T+ R R L P P++ E + ++ VALVFGRE Sbjct: 65 DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPAWEVPARVLS--VEGEVALVFGRE 122 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GLTNEEL H I PE SLNLA AV V AYE+ A + E++ Sbjct: 123 TFGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPREELAQ---- 178 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 V LE F+ L + +L GF +N M +LRR+F +AR E+ +LRG+L Sbjct: 179 ---VAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQS 235 Query: 237 EQQNK 241 Q + Sbjct: 236 RYQMR 240 >UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus RepID=Q2JI62_SYNJB Length = 276 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 127/250 (50%), Gaps = 11/250 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L +R+VLV+ + N+G++AR MK MG LV+P P D +AI A +D++ A Sbjct: 12 LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118 V TL EAL GC V GT+ RS+T P W + PR+ +A LVFG E Sbjct: 72 RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAA---LVFGPEDR 128 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR--MAWLATQENGEQVEHEETP 176 GL+NEEL CH + I + Y SLNLA AV + YE+ + + P Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELYTLVCQSPSPAPPMPSPQRLAP 188 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + L LE F+ HLE LL G++ + + M K R LF RA E+ +LRGIL + Sbjct: 189 FEL---LEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQL 245 Query: 237 EQQNKGNKAE 246 + ++ E Sbjct: 246 QWSQGCSRQE 255 >UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB Length = 256 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 6/236 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 +VL E N+G VARAM GL +L L+NP P +A + ++ A VI A + D+ Sbjct: 16 VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERVGLTNEE 124 ++EA+A LV T+ARSR +P P++ P E +SVA+ P +FGRER GL N+E Sbjct: 76 VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + V + +P Y+SLN+A AV V AYE R A ++E P + ++ Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEPA-TQESIQ 194 Query: 185 RFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 R + HLE L A GF R E P + +LR +F +A E+ I+RG+++ E+ Sbjct: 195 RMFDHLESGLDARGFFRPVEKKP-VTIRRLRNIFQKADLTDNEVRIMRGVISCFEK 249 >UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGR7_THEYD Length = 252 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 129/239 (53%), Gaps = 10/239 (4%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ VLVE +GN+G+ ARA+K MG TNL L+NP+ D +A +A + DV+ A I Sbjct: 10 ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINPVPLQD-EAYWMAWASKDVLEKAQI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121 LDE+L +L++GT+ R ++D ++ G+K V E A N VA++FGRE GL Sbjct: 69 FRELDESLKDKALIIGTTRRRGAKRGAIIDVKD-GVKRVYEVAQNNKVAILFGREDKGLF 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEE++KC Y + I + SLNLA AV ++AYE L E + Y Sbjct: 128 NEEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYE-----LMRCEELKDFHMNRQFYVSQT 182 Query: 182 DLERFYGHLEQTLLATGFIRENHP--GQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +L++ Y L + L +I +N +++N R F R EL +L G+ IE+ Sbjct: 183 ELDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEE 241 >UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJE3_MEIRU Length = 257 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 20/244 (8%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLV--NPLVKPD-------SQAIALAAG 52 L+NIRIVLV + N+G+ ARAM+ G+++LWLV P V+ D S A LA Sbjct: 4 LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63 Query: 53 ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTL-PWPMLDPRECGLKSVAEAANTPVAL 111 A DV+ +VDTL EA+A LVVGT+ R R + P++ PR L+ A VA+ Sbjct: 64 AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123 Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171 VFGRE GLT +E+ V I +P SLNLA AV ++ YE+ Q Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEI--------FGVAQAP 175 Query: 172 HEETPYPLVDD--LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229 P L L++ + L++ +L GF E + + RRL +AR E+ +L Sbjct: 176 PPPEPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLL 235 Query: 230 RGIL 233 RG L Sbjct: 236 RGFL 239 >UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7Y7_MAGSM Length = 258 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 9/235 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +L SH GN+G+ RA+ MG +L LV P P A AAG + I + D+L Sbjct: 15 FILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQVFDSL 74 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNEE 124 D A A + +V + R R ++ PRE G L + A++ V ++FG ER GL + Sbjct: 75 DAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTGLETAD 134 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLVD 181 +++CH+ I + E SLNL+ AV ++AYE+ + Q GE H+ + D Sbjct: 135 VERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLG----QGLGEVPVHDPQRDDALASQD 190 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 ++ RF+ HL+ L+ FI+ + Q+M L+ LF RA + +E+ ILRGIL + Sbjct: 191 EMVRFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEV 245 >UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4 Tax=Moraxellaceae RepID=Q4FSH9_PSYA2 Length = 298 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 111/196 (56%), Gaps = 15/196 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +I++V+V T+ N+GS ARAM TMGL+ L +V P + D+ +++ AAG SD++ +A Sbjct: 24 LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDP------------RECGLKSVAEAANTP- 108 I TL+ A+A C LV S+RSR LP P++ P ++ + + P Sbjct: 84 IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143 Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 +A++FGRE GLTNEEL YH+ I ANP Y LN+A AVQVIA + A+ T Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFI-FAYAQTHIKAN 202 Query: 169 QVEHEETPYPLVDDLE 184 E P + D LE Sbjct: 203 S-EANNNPLEVTDSLE 217 >UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon RepID=D1JIN9_9ARCH Length = 234 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 24/240 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS--QAIALAAGASDVIGNAHI 62 +RI+LVE N+G+VAR K G ++L++VNP P+ +A+++AA A DV+ + I Sbjct: 3 VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNP---PEIGIKALSVAAHAYDVLQSCKI 59 Query: 63 VDTLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 VD+L A+A ++V GT+A+ ++ L P P E LK ++++FGRE Sbjct: 60 VDSLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGRED 117 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 VGL N+EL+ C V+I +PEY +NL+ AV VI YE+ T E Sbjct: 118 VGLLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLELAP--------- 168 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V+D ER Y L+ L G+ RE+ + + LRR+ RA ++EL L+GI+ E Sbjct: 169 --VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAE 225 >UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus RepID=Q1IWV0_DEIGD Length = 254 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 9/235 (3%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62 N+ +VLV GN+G+ ARAM MG ++L +V P P DSQA+A+A A+D++ +A I Sbjct: 2 NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 TL EALA L VGT+AR R LP P ++ + AA+ P ALVFG E GL Sbjct: 62 YPTLREALADRDLSVGTTARLRADLPPPR---HPAQVRPLVRAASAP-ALVFGPEETGLV 117 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N +L++C V + EY+SLNLA AV ++ YE A T + +T + Sbjct: 118 NSDLEQCQVTVRV-PTAEYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKTAT--RE 174 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 ++E YGHL +T+ G+ + R + RA S E + RG L + Sbjct: 175 EMEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQV 229 >UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae RepID=Q1D9N7_MYXXD Length = 240 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 94/250 (37%), Positives = 128/250 (51%), Gaps = 23/250 (9%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ +R VL+ + N+G+ ARA+K GL++ V P V+ A LA A DV+ A Sbjct: 1 MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 DTL+EA+A C VVGTS+R R LP PR G + VA A PVALVFG E Sbjct: 61 RRADTLEEAVADCVWVVGTSSRKVEGKRRLP-----PRAVGEELVARAPQGPVALVFGDE 115 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 R GLTN E+++ H A+ PE S+NLA AV + AYEVR+A L E P Sbjct: 116 RSGLTNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAML------EAAATPPGP 169 Query: 177 YPLV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILR 230 P +L + LE L GF+ + PG+ +R LF R+R +E + Sbjct: 170 LPAAATDAELAQVESTLESVLTTGGFLVDAQPGR--TAVRDLFAPLRRSRLTRKEARLWL 227 Query: 231 GILASIEQQN 240 L S+ ++ Sbjct: 228 AALHSLRKRQ 237 >UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY86_SYNAS Length = 263 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60 L++I +VL + GN+GS AR K MG+ L +V+ + ++ A+DV+ + Sbjct: 18 LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L EAL+G + +VGT+AR P++ PRE + + + + VAL+FG E GL Sbjct: 78 VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-YPL 179 TN++L+ CH V+I + + SLNL+ AV ++ YE+ +A E G V TP Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVA-----ETGIPVRF--TPKMAS 190 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 +LE YGH+ L GF+ +P M +RRLF+R R +++E+ I+RGI Sbjct: 191 SRELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGI 243 >UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales RepID=A7IP45_XANP2 Length = 298 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 121/250 (48%), Gaps = 21/250 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+GS ARAM GL+ L +VNP P A +AGA ++ A + Sbjct: 19 VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT------PVALVFGRERVG 119 L AL G + +AR R + P+L G +VA+ A + VALVFGRER G Sbjct: 79 LRSALVGVNYAFAATARERGMAKPVL-----GADAVAQEARSRLAGGEDVALVFGRERTG 133 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L EE+ C + + NP ++SLNLAM V V YE W + G PL Sbjct: 134 LYTEEVSLCDAILTLPVNPAFASLNLAMCVAVTGYE----WFKAETGGALPFAPPDRSPL 189 Query: 180 VD--DLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 D DL F+ HLE L +GF R E P + N LR +F R Q+L L G + + Sbjct: 190 ADKGDLLAFFDHLEGALEQSGFFRSPEKAPSTIRN-LRNIFHRLGLTRQDLATLHGAVTA 248 Query: 236 IEQQNKGNKA 245 +E+ G A Sbjct: 249 LEEGRAGRDA 258 >UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium HF10_12C08 RepID=A4GJN4_9BACT Length = 245 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 7/243 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60 I I+LV+T N+G VAR+M G TNL LV+P ++ P +A+A+A A +++ N Sbjct: 3 FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +L EAL+ S +G +AR R + D + + + N + +VFG E GL Sbjct: 63 KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN+ L V I + +SSLNL+ AV V Y + T+ + V+ P+ Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTE---QLVDKNSEPHGSQ 179 Query: 181 DDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +DL F+ HLE+ L + GF + E P N LR +F RA +E+ LRG++ + + Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQN-LRNIFHRADLSEREIATLRGVVRVLSE 238 Query: 239 QNK 241 K Sbjct: 239 YRK 241 >UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms RepID=D0B958_BRUME Length = 291 Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 123/235 (52%), Gaps = 6/235 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+LV N+G VARAM GL L LVNP + P +A A A+ A VI NA + D Sbjct: 32 IILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYDD 91 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNE 123 L A+A + V T+AR R P+ E G L+ + ++FGRER GL+NE Sbjct: 92 LPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEK-TGILFGRERFGLSNE 150 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ + NP ++SLN+A AV +++YE + L Q + E P ++L Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237 F+ HLE+ L G+ R ++M N LR + TRA S EL +LRG++ S++ Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264 >UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio RepID=B8DKE7_DESVM Length = 266 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 86/252 (34%), Positives = 128/252 (50%), Gaps = 23/252 (9%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54 ML N+ +VLV+T N+G VARA MG ++ LV+P ++A+ LA Sbjct: 1 MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60 Query: 55 DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVF 113 D++ +V TL EA+A C++V GT+AR+ +L P ++ A VA+VF Sbjct: 61 DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 G E GLTN+E++ CH + I PE SSLNLA AV V+ YE + AT H Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYEC-LKGTAT--------HP 171 Query: 174 ETPYPLVD-------DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226 P P D +LE + L TLLA ++R ++P M +RR R R E Sbjct: 172 FRPGPAPDSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEF 231 Query: 227 NILRGILASIEQ 238 +++ G+ +++ Sbjct: 232 DLVMGVCRQVKR 243 >UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHT7_SYNFM Length = 257 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 8/237 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNA 60 L+NI IVL E + N+G+ AR+ K MG+ L +VNPL + + +A A DV+ Sbjct: 5 LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I D L ALA VVGT+AR + + +PR+ + V+ + A++FG E GL Sbjct: 65 EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNE+L+ C + V I +++S+NLA AV ++AYE+ A N E+ + Sbjct: 125 TNEQLRFCDFLVTIPT-ADFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 +LE Y L TL FI +++P M +RR F+R + E+ I+RGI I+ Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQID 234 >UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKR3_DESAH Length = 247 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 113/236 (47%), Gaps = 5/236 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61 Q I +VLVE N+GSV RAM G + L LVNP ++ A +A A ++ A Sbjct: 4 QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VDTL +AL C L GT+ R L P + G E ALV GRE GL Sbjct: 64 VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EL+ C V I Y S+NL+ A ++ Y+ MA T + TP Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 +L Y H+ ++L F+ +P ++ RR+F RA + +E+ I+RG++ I+ Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRID 235 >UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4014 Length = 269 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 121/241 (50%), Gaps = 14/241 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59 +L R+VLV + GN+G+ AR M+ GL++L LV P D A +A V+ Sbjct: 4 LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63 Query: 60 AHIVDTLDEALAGCSLVVGTSA------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113 A +V L +AL+ C + TS+ RS T+ E L + AEA PVA+VF Sbjct: 64 ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIGTAAEQMPE--LLAAAEAG--PVAVVF 119 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVE 171 G E GL+NEE+ +CH V + ++P SLNLA AV + YE R AW G+ Sbjct: 120 GPEPHGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEI 179 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 E P D +R + HL L G++ +M+ +R+L RA P QE+ IL G Sbjct: 180 PERAVAPFADQ-DRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHG 238 Query: 232 I 232 + Sbjct: 239 L 239 >UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae RepID=B8H062_CAUCN Length = 263 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 11/238 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++L E N+GSVAR M GL++L LV P P +A A A+GA + +A + DT Sbjct: 13 VILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFDT 72 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124 L+ A+A LV T+AR R P+ PRE E A V L+FG ER GL ++ Sbjct: 73 LEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETDD 132 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD-- 182 + C V+I + + SLNLA AV + AYE W TQ++ + E+ D Sbjct: 133 IALCQAIVSIPIDERFRSLNLAQAVSINAYE----WKMTQDDRPWRKFEQNVEEPADQAA 188 Query: 183 LERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 L YGHLE L GF E P V N LR RAR QE+ RG++ ++ + Sbjct: 189 LLGLYGHLEDELEKAGFYHPPEKKPSMVRN-LRAPLARARLSDQEVRTFRGVITALSK 245 >UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota RepID=Q0W2E0_UNCMA Length = 249 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 24/241 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+GSV RAMK G +L LV P +S A A+A+ A D++ +A IV Sbjct: 8 HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPCELGNS-AKAMASHAQDLLASAAIV 66 Query: 64 DTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 DT++EAL G S++VGT+ + + + P PRE LK++ E VAL+FG+E Sbjct: 67 DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NE L+KC ++I + +Y +NL+ AV V+ YE+ + + + Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-------------ADIKGNDFL 171 Query: 179 LVDD--LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 L D E Y H+EQ L + + + + +RR+ RA +E L G++ I Sbjct: 172 LADSEMQEILYQHVEQLLDSINY-ADYKKDKTSLMIRRIIGRAMISPREYFTLMGLIRDI 230 Query: 237 E 237 + Sbjct: 231 Q 231 >UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Desulfuromonadales RepID=Q3A4B2_PELCD Length = 244 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 7/247 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 +I +VLVE N+GSV RAM G ++L LVNP+ A +A AS ++ A Sbjct: 3 FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L ALA C+L GT+ R L P + + + VA VFGRE GL Sbjct: 63 RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPL 179 EL C V I + S+NLA +V + YE R+A +A G+ + T Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSRVAAIAC---GKTAGRKSTSS-- 177 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + LE Y H+ TL GF+ +P ++ RR+F RA +E+ ILRG+ + ++ Sbjct: 178 IATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWL 237 Query: 240 NKGNKAE 246 N + E Sbjct: 238 NGQRREE 244 >UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum centenum SW RepID=B6ISG6_RHOCS Length = 266 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 9/240 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G+ ARAM GLT L LVNP P+ +A+A +AGA++V+ A + Sbjct: 25 VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNEE 124 EA+A V T+AR R + ++ PR A AA V ++FG ER GL N++ Sbjct: 85 TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLVDDL 183 + +++ NP +SSLNLA AV ++AYE W+ + E H ++P ++L Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEW---WMEAAQAEEFYTHTGQSPPATKEEL 201 Query: 184 ERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + HLE L TGF + P V N +R RA QE+ GI+A++ + K Sbjct: 202 HNLFDHLEGELDQTGFYTHPDKKPSMVRN-VRNTLQRAHMTEQEVRTFHGIIAALVGRKK 260 >UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae RepID=B0T711_CAUSK Length = 266 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 119/238 (50%), Gaps = 11/238 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++L N+G+VAR M GL +L LV P P +A A+GA+ + NA + DT Sbjct: 10 VILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNAKVFDT 69 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 L+EA+A LV T+AR R P++ PRE + E V L+FG ER GL ++ Sbjct: 70 LEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAGLETDD 129 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD--D 182 + C ++I + + SLNLA AV + AYE W T ++ V+ E+ P D Sbjct: 130 IALCQAIISIPIDERFRSLNLAQAVSINAYE----WKMTVDDRPWVKFEQNVEPPADQSS 185 Query: 183 LERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 L Y LE+ L GF E P V N LR RAR QE+ RG++ ++ + Sbjct: 186 LLGLYAQLEEQLEEAGFYHPPEKKPSMVRN-LRAPLARARLTEQEVRTFRGVVTALSR 242 >UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU Length = 231 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 131/252 (51%), Gaps = 32/252 (12%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M +++I+LVE + GN+GSVARAMK G ++L LVNP + +A A A+ A D++ +A Sbjct: 1 MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNP-CELKMEARAFASHAYDILESA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 V+T++EAL G LV+ T+ + + P PR+ LK + +A++FGR Sbjct: 60 KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 E G TNEEL+ V+I + Y +NL+ AV +I YE M+ + EN Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYE--MSQILAGENS-------- 167 Query: 176 PYPLVD--DLERFYGHLEQTLLATGFIRENHPGQVMNK----LRRLFTRARPESQELNIL 229 L D DL + H+++ L ++P K +R+F RA+ +E+ L Sbjct: 168 ---LADGFDLRLLFEHIDEVLDDI-----DYPAHKKEKTHLMFKRIFGRAQLMPREVQTL 219 Query: 230 RGILASIEQQNK 241 RG + +++ K Sbjct: 220 RGFIGKVQKHIK 231 >UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae RepID=Q1GGZ7_SILST Length = 249 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 19/237 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 VLV N+G ARAM GL + +V P P+ +A+A+A+GA ++ A + Sbjct: 10 FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123 L EALA C+ V T+AR R L P+ P E +K AE VA++FG ER GL N+ Sbjct: 70 LPEALADCTYVFATTARPRELTKPVFSP-EGAMKKAAELMVQGEKVAVLFGPERAGLEND 128 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYP 178 ++ K + + + NPE++SLNLA V + AYE R EQV HE ++ + Sbjct: 129 DIAKANAIITVPVNPEFASLNLAQCVLLTAYEWR-------RQQEQVAHETFEIGKSEWA 181 Query: 179 LVDDLERFYGHLEQTLLATG--FIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 ++E H E+ L G F E PG + R L++R + ++ +L G++ Sbjct: 182 TNQEVEALVNHYEERLTEAGYFFPPEKAPG-MKTVFRNLWSRMQLTRADVQMLHGVM 237 >UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria RepID=A8ZWU6_DESOH Length = 260 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 8/233 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS-DVIGNAHIV 63 I I+LV N+G+ RAMK MGL+ L +V P + + A A DV+ IV Sbjct: 14 ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 A++ S + GT+AR +L P K+V PVA++FG E GL NE Sbjct: 74 GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +LQ CH V I + E+SSLNLA AV VI YE+ A Q +H + +L Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 E Y +++ LLA F+R ++P MN RR +R ++E+ ++RG+ + Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQV 239 >UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria RepID=Q2RWJ5_RHORT Length = 279 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/236 (37%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD---SQAIALAAGASDVIGNAHIV 63 IVLV N+G VARAM GLT L LV P + D +AIA A+GA ++ A Sbjct: 20 IVLVRPQLAENIGMVARAMLNCGLTALRLVAP--REDWLAEKAIASASGADGLLREARFF 77 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122 +T + A+A + V T+AR R + +L PR + + AA A++FG ER GL+N Sbjct: 78 ETTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSN 137 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +++ V + NP Y SLNLA AV ++ YE A AT EQ+ +T + Sbjct: 138 DDVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQAGDATP--AEQLVTNDTQPATRGE 195 Query: 183 LERFYGHLEQTLLATGFIRE--NHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 L F+ HLE+ L GF+R PG V N LR LF RA QE+ L G++ + Sbjct: 196 LLGFFDHLERELDDCGFLRNAAKRPGMVRN-LRNLFERADLTEQEIRTLHGVVKEL 250 >UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVT8_DESBD Length = 248 Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 4/234 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59 ML+NI ++L + N+GSVARA MG + LV P +A+ LA A ++ N Sbjct: 1 MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERV 118 I TL EALA S GT+AR+ + P E + + ++ A VA+VFG E Sbjct: 61 IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLTNEE C+ + I +SLNL+ AV V+ YE LA + + + Y Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 ++ E + L +TL+ F+ +++P M L+R F R P E N+L G+ Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGL 232 >UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH12_DESAA Length = 251 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 119/239 (49%), Gaps = 13/239 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60 + I IVL E N+G ARAM MGL L +V P + +A AGA +I + Sbjct: 7 FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD L AL + VVGT+AR + M K ++ VALVFGRE GL Sbjct: 67 EVVDDLKTALKEFNWVVGTTARLGSHRKAMT-VENMAAKLISMTGENRVALVFGREDRGL 125 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + E+++ CH V I +SSLNLA AV ++ YE+ A G E TP L Sbjct: 126 STEDVRLCHQLVNIR-TAGFSSLNLAQAVLLVCYELFKA-------GSDKPRESTP-KLA 176 Query: 181 D--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 + DLE Y L + L+ FI +P M+ +RR FTR ++++ I+RGI ++ Sbjct: 177 NKFDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVD 235 >UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH Length = 384 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 8/241 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61 Q IVLV N+G+ ARAM+ GLT L LV P P+ A AAGA DV+ A Sbjct: 137 QKPAIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQ 196 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + T EA+A C+ + T+ R R + P++ P E ++A + A++FG ER GL Sbjct: 197 VFATTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQAGKS--AVLFGPERSGLE 254 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 E++ + + +PE+ SLNLA AV + AYE W E + + + P Sbjct: 255 TEDVALARAILTVPIDPEFGSLNLAQAVILCAYE----WSKGAELEQPTQEDLLPPAPQA 310 Query: 182 DLERFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +L+ HLE L G F+ N LR + T+ E+ LRG+L+S+++ + Sbjct: 311 ELDDLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGD 370 Query: 241 K 241 K Sbjct: 371 K 371 >UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A381_THESM Length = 246 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 118/237 (49%), Gaps = 31/237 (13%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62 ++++LVE + N+G++AR MK G+T+L LVNP V P+++ A A A D++ NA I Sbjct: 2 KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLK-SVAEAANTPVALVFGRERV 118 ++L+EAL L +GTS + P + P E + S+ + + LVFGRE Sbjct: 62 HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRLSIYDGE---IGLVFGRESR 118 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV--------------RMAWLATQ 164 GL NEEL+K + V I + EY +NL+ AV VI YEV R+ Q Sbjct: 119 GLDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKSTRQ 178 Query: 165 ENGEQVEH-----EETPYPLVDDLE--RFYGHLEQTLLATGFIRENHPGQVMNKLRR 214 E VE + YP DLE RFY + + L GFI + LRR Sbjct: 179 EREMLVEFWAKFLDTLEYP--KDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRR 233 >UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5 Length = 277 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 18/242 (7%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+LVE N+G VARAM GL+ L LVNP P +A A A+ A VI + +T Sbjct: 17 IILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFET 76 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNE 123 L+EA+ + V T+AR R P+ P L++ +A ++FGRER GLTNE Sbjct: 77 LEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEK-TGILFGRERWGLTNE 135 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYPLVD 181 E+ V NP ++SLN+A AV +++YE W+ + + GE + P Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYE----WMKSGMDDLGETLFQPIEQRPSTK 191 Query: 182 DLERFYG---HLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 E+ +G H+E+ L A G+ E P V N LR + +R QE+++ RG++ S+ Sbjct: 192 --EQVFGLFEHIEEALDARGYFHPAEKKPKMVDN-LRAVLSRRGFSEQEISVFRGVIRSL 248 Query: 237 EQ 238 ++ Sbjct: 249 DR 250 >UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9A6_GEMAT Length = 283 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 20/252 (7%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L + +VL E+ + N+G V RAMK MG+ +L L+ P ++ +A D++ Sbjct: 5 ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +T+DEALA C VVG S R + W PR + + A VA++FGRE GL Sbjct: 65 QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124 Query: 121 TNEELQKCHYHVAIAANP--EYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY- 177 NE L + + AI P E+ SLN+A A + YE+ M LA G+ + P Sbjct: 125 PNEALDRSN---AICTIPTTEHFSLNVAQACLLALYELHM--LA----GDATKRLPPPRH 175 Query: 178 ----PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG-- 231 P DD+ER + + L A + + +M R L RA P+ +EL ++R Sbjct: 176 AAGSPSKDDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTAS 235 Query: 232 --ILASIEQQNK 241 +L +IE++ + Sbjct: 236 IEVLRTIERETR 247 >UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae RepID=D2PC46_SULIS Length = 237 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 34/245 (13%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IR+VLVE N+G VAR + + L++VNP S+A +AG + + A IV+ Sbjct: 2 IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60 Query: 65 TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 DEA+ + + TS+ R PW +L + VALVFGR Sbjct: 61 NFDEAINDVDIKIATSSIADNNGDILRKSIRPWELL----------SLIQGKKVALVFGR 110 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV----------RMAWLATQE 165 E VGLT EE+ KC + + I ANP Y LNL+ AV ++ YE+ + + ++ Q Sbjct: 111 ESVGLTREEIFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQS 170 Query: 166 NGEQVEHEETPYPLV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222 + E Y ++ DD + Y L++T++ G E +++ LR+L+TR Sbjct: 171 IKLIDRYAEILYKMLKRSDDDYKMYIALKRTII-KGVKDEEEARVIVHFLRKLYTRIIHN 229 Query: 223 SQELN 227 +E+N Sbjct: 230 EKEMN 234 >UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53114 Length = 251 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 9/249 (3%) Query: 2 LQNIR--IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIG 58 +QN R ++LVE N+G+VARAM GL L LV P P+ A A+A+GA +V+ Sbjct: 6 VQNNRPVVILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLT 65 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG-LKSVAEAANTPVALVFGRER 117 +A + + ++A+ + + T+AR R L ++ P E L + + +FG ER Sbjct: 66 SAEVFEQTEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSER 125 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL N+++ Y + + NPE+SSLNLA AV ++ YE A L + + + E Sbjct: 126 SGLINDDIAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWGNSE--L 183 Query: 178 PLVDDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 + + E FY LE+ L GF+ E P + LR +F++A +QE+ L GI+ + Sbjct: 184 STIGEREYFYKRLEKHLDEAGFLYPLELAP-TICRNLRAMFSKATLTNQEIRTLHGIVTA 242 Query: 236 IEQQNKGNK 244 + +K Sbjct: 243 LSNYTPDSK 251 >UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae RepID=Q0AQY2_MARMM Length = 249 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 23/230 (10%) Query: 17 NMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSL 75 N+G+ AR M GL L +V+P P+ +A+ ++AG S V+GNA + L +A+ + Sbjct: 20 NIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEYRLGDAIHDTTR 78 Query: 76 VVGTSARSRTLPWPMLDPREC--GLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVA 133 + T+AR R + P++ RE +K+ EA VA++FG E+ GL NE + + Sbjct: 79 LYATTARPRGMEKPVMTAREAVSDMKAAIEAGEK-VAVMFGGEKSGLPNEAVNMADVIIT 137 Query: 134 IAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV---DDLERFYGHL 190 + + +SSLNLA AV VIAYE W A GE E P V +DLER + H Sbjct: 138 LPVDRSFSSLNLAQAVAVIAYE----WTA----GEGAPAEFEPVSDVAKREDLERMFEHF 189 Query: 191 EQTLLATGFIRENHPGQ----VMNKLRRLFTRARPESQELNILRGILASI 236 E L GF HP ++ LR F R R QE+ RG + ++ Sbjct: 190 ETELERAGFF---HPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKAL 236 >UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0P2_DESAC Length = 243 Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 7/227 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VLVE GN+G+V RAM G+ L LV S A+ + GA ++G A L Sbjct: 8 VVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPDL 67 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 ALA V + R+ L +L E + + AA + VA VFGRE GLT +E+ Sbjct: 68 AAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEVA 127 Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERF 186 C I E SLNLA AV V YE+ ++V + P D E Sbjct: 128 LCSQAATIETTDETGSLNLAQAVVVTLYEL-------SRRQDRVGIVQRDQPTHDQFEPL 180 Query: 187 YGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 + L++ + G++ + P + LRRL +A P+ ELN LRG++ Sbjct: 181 FQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLI 227 >UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10 Tax=Halobacteriaceae RepID=B9LNN3_HALLT Length = 290 Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 116/226 (51%), Gaps = 18/226 (7%) Query: 16 GNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGA-SDVIGNAHIVDTLDEALA-- 71 GN+G++ARAMK GL++L LV+P +K D +A A A DV+ NA V T DE +A Sbjct: 50 GNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVANY 108 Query: 72 ---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128 G + + G +S +P P E L+ + + P A+VFGRE GL NEEL + Sbjct: 109 HTVGTTAITGEDDQSHER-FPFKTPVE--LRESLKTVDAPTAIVFGREGRGLNNEELSQL 165 Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVR-MAWLATQENGEQVEHEETPYPLVDDLERFY 187 +I A+ +Y LNL A V+ YE+R + TQ V P D+ERF+ Sbjct: 166 DEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP-----DVERFH 220 Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 L ATG RE+H + +RRL RA P +E++ L G Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTF 265 >UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG74_LIBAP Length = 268 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+LV+ N+G VARAM LT L LVNP P +A + +A A VI + + Sbjct: 17 IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFGRERVGLTN 122 L EA+A + T+AR+R +L P+E + + + N V ++FGRER GLTN Sbjct: 77 LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQN--VGIIFGRERWGLTN 134 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE+ + ++ NP + SLN++ AV ++ +E + + E + V+ + TP + Sbjct: 135 EEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSE--KNVKEQNTP-ATKGE 191 Query: 183 LERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 L F +LE +L G+ R ++++ L +F R +E+ +LRGI++++++ Sbjct: 192 LLSFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDK 248 >UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPH4_NATPD Length = 264 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 120/240 (50%), Gaps = 18/240 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGA-SDVIGN 59 + NI + +V GN+G++AR+MK GL+ L+LV+P + PD +A A A DV+ N Sbjct: 1 MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60 Query: 60 AHIVD--TLDEAL--AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 A V+ L E C+ A ++ + +P ++P L + V +VFGR Sbjct: 61 ATEVEFSYLTEQFYTVACTATTNEDA-TKHVRYPFIEP--AALSDELAGLDADVCIVFGR 117 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 ERVGLTN+EL + +I A+ +Y LNLA A ++ YE+R + E+ +H + Sbjct: 118 ERVGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTV------EETQHPKQ 171 Query: 176 PYPLVD--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 + D ++E + + L G E P + RRL RA P +E LRG+L Sbjct: 172 AHERADEHEIEGLHETFSEYLHEVGHPEEKIP-KTERLFRRLAGRASPTGREARTLRGVL 230 >UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus RepID=B5IRU8_9EURY Length = 245 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 35/247 (14%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD--SQAIALAAGASDVIGNAH 61 + ++LVE + N+G VARAMK + L LVNP P+ +A A A DV+ NA Sbjct: 2 KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNP---PELRGEAYKFAMHAKDVLENAK 58 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERV 118 IV T+DEAL + VGT+ S + P + P E ++ + + FGRE Sbjct: 59 IVKTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAKRAFLYGGK--IGIFFGRESK 116 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR----MAWLATQENG--EQVEH 172 GL+NEEL+K + V I + EY +NL+ AV V+ YE+ A ++T+EN + Sbjct: 117 GLSNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRHLRKATR 176 Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK------LRRLFTRARPESQEL 226 EE D L +++ L +TL N+P + + LRR+ R+ ++E+ Sbjct: 177 EEK-----DILVKYWSELLETL--------NYPKDPIRRKYFTIMLRRVIGRSFIYAREI 223 Query: 227 NILRGIL 233 L G L Sbjct: 224 YSLYGPL 230 >UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BNA8_HYPBU Length = 239 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 115/230 (50%), Gaps = 16/230 (6%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI 62 +R+V+V N+G +AR + +LV+P+ P+S +A AA ++ + Sbjct: 8 RVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVIV 67 Query: 63 VDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 VD+L+EAL G L V TSA+ + + + PRE + +A + VA+VFGRE VG Sbjct: 68 VDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFA-EEIAPRYES-VAVVFGRESVG 125 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LT +EL KCH V I ANP Y LNL+ AV ++ YE L GE+ HE Sbjct: 126 LTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYE-----LYNTRRGEKQLHEPAR--- 177 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229 + LER Y HL + LA + QV L+ + R E ++L Sbjct: 178 GETLERIYEHL--SWLAEKLVDRERVSQVKAALKHILWRCSITGGEASML 225 >UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG27_ARCPR Length = 234 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 23/247 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I + LV N+G VAR MK G L+L N K + + A+ A D++ NA ++ Sbjct: 2 ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYN--CKVTTVSFKTASHARDILRNAVVLR 59 Query: 65 TLDEALAGCSLVVGTS-----ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 D+ L +++VGT+ + R + P+ P E ++ E +A+ FGRE G Sbjct: 60 KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEE--FRNFLEGKKGEIAVAFGREDYG 117 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL+ CH V++ NPEY +N++ AV VI YE L+ + G E+ Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYE-----LSKGKYGL----EDKTIVT 168 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI----LAS 235 ++E+ + E+ +L T + R + + LRR+ R+ +EL +L GI L Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227 Query: 236 IEQQNKG 242 I+ KG Sbjct: 228 IQHLKKG 234 >UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E490 Length = 236 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 116/235 (49%), Gaps = 20/235 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M G+++L +V + +++AI + ++ NA I + Sbjct: 8 ISVVLVEPKYQGNIGAVARSMANSGISDLRIVKTPI--ETEAIYRSMHGRYILDNAKIFN 65 Query: 65 TLDEALAGCSLVVGTSARS------RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +L EA++G ++ GTS S R +P P E S VALVFGRE Sbjct: 66 SLKEAVSGFEIIAGTSDISKSGEKFRRVP---TGPEE--FWSTNGLTGQKVALVFGREDN 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL EEL C++ + I NPEY NL+ AV +I YE+ A + H+ Sbjct: 121 GLNYEELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEM---IKANYSGNATITHDLIGRD 177 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 +D L G LE+ LLA E +MN L R+ RA E + GI+ Sbjct: 178 KIDTLA---GRLEE-LLAKIDYNEQEIDTLMNMLNRIIARANITDSEFFKIMGIM 228 >UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma RepID=Q9HJF9_THEAC Length = 291 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 30/247 (12%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ IVLV + GN+G+VAR+M GL +L ++ +PD +A A + G ++ NA I Sbjct: 49 ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGN--RPDDEAFARSMGGRFILENAEI 106 Query: 63 VDTLDEALAGCSLVVGTSARS-------RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 D ++ +++ TS+ + R LP L P + + + +ALVFGR Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLP---LTPEKFWEEMSDQGGK--IALVFGR 161 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE----QVE 171 E GL NEE++KC+Y + I NPEY NL+ AV +I Y V EN E + + Sbjct: 162 EDDGLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIEPD 220 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 HE+ + ++ R + E + T + LRRL R+R +E + G Sbjct: 221 HEDLMLRNIIEVMRLTSYPEHKIRNTELL-----------LRRLIARSRMSDREYFRMMG 269 Query: 232 ILASIEQ 238 ++ +++ Sbjct: 270 VIRRVKE 276 >UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F137_ACIC5 Length = 240 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 11/237 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLV T + N+G+ ARAM G +L +V P +A + A GA+ ++ +A Sbjct: 10 IAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEARS-AVGAASILASARECS 68 Query: 65 TLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 TL +A+A C+ V+GTSA P P++D L +A+ +ALVFG+E+ GLTN Sbjct: 69 TLADAVADCTCVLGTSAIGDRQPLQPIVD-LPAALPWLAQRVAGRIALVFGQEKHGLTNH 127 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL-VDD 182 +L C + I PE +S+NL AV V YE +G E P D Sbjct: 128 DLSHCDAILRIPTLPEQASMNLGQAVAVCLYEF-------ARSGHAPTATEAPKAAPAAD 180 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 LER L + L +G+I+ + + R L R ++ ++L G+LA IE++ Sbjct: 181 LERLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERK 237 >UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA Length = 234 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 25/248 (10%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+G VAR MK G+ L+LV P + AIA A A D++ NA IV Sbjct: 2 DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61 Query: 64 DTLDE-------ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 +TL+E A+A +++ T AR+ +PW + + A + +A+VFG E Sbjct: 62 NTLEEAIEDVEAAIATTAVLASTPARNPMMPWEVRE---------AFSDYEKIAVVFGPE 112 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL E++ C + I + EY S+NL+ +V V+ YE++ + G E Sbjct: 113 DRGLRTWEVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKMEYVPERYGRAATKREKE 172 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 LV L+ L + L REN V RR RAR +E+ L I Sbjct: 173 V-LVKSLD----DLMKALNFDSTRREN----VCTTFRRFLARARCTDKEIKALLWIFEKA 223 Query: 237 EQQNKGNK 244 +++ G K Sbjct: 224 KRRVLGVK 231 >UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus RepID=Q31MT7_SYNE7 Length = 245 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 10/234 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62 ++RIVLVE + N+G++AR M GL++ +V P +A +A A+ ++ A + Sbjct: 2 SLRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVL 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 VD L AL GC V T+ + P+ P + + P AL+FGRE GL Sbjct: 62 VDNLPSALEGCQWVAATTGQRDLRDLPLESPTQI----LPWLRQGPAALIFGREDSGLQR 117 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EL ++ +P Y SLNLA AV + Y A L+ ++ + E +P + Sbjct: 118 SELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYH--YACLSEADSRGVPQQESSPAAVRAA 175 Query: 183 LERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 E+ +G+ LE LL G++ + M K+R + R+ ++E+ +LRG++ Sbjct: 176 FEQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMV 229 >UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM7_HIRBI Length = 253 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 9/234 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+LV N+G+ AR M GL +L ++NP P+ +A ++AGA + A + DT Sbjct: 12 IILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFDT 71 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L+ LA + V+ T+AR R + P+ + E G+ ++ + V ++FG E+ GL NE++ Sbjct: 72 LEAGLADLTYVLATTARPRGMEKPVFNAEE-GIGALMSRPDVGVGVMFGAEKAGLLNEDV 130 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD--DL 183 + + +SSLNLA AV V A+ +W A GE + D L Sbjct: 131 ALADGILTYPVDRSFSSLNLAQAVGVFAH----SWAARTLEGEAKKEFAGVGDSADREQL 186 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASI 236 R + H E L GF VM + LR F RA+ +QE+ RG + ++ Sbjct: 187 VRMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKAL 240 >UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales RepID=Q28PL2_JANSC Length = 258 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 15/248 (6%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 VLV N+G+ ARAM GL + +V+P P+ +A+ALA+GA ++ NA + Sbjct: 17 FVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQD 76 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNEE 124 L AL+ C+ V T+AR R L P++ P ++ A A V ++FG ER GL N + Sbjct: 77 LPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENAD 136 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYPL 179 + +++ NP + SLNLA V + AYE W Q G V E +T + Sbjct: 137 IAPADAIISVDVNPAFPSLNLAQCVLLCAYE----W---QRQGSTVAPEVMALAKTDFAS 189 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQ 238 ++E+ H E+ L GF M LR L+ R ++ L G++ + + Sbjct: 190 NLEVEKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVR 249 Query: 239 QNKGNKAE 246 +G + + Sbjct: 250 WAEGRRKD 257 >UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH2_9PROT Length = 293 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 119/236 (50%), Gaps = 6/236 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LV N+G+ ARAM GL L LV P P++ A A+AAGA++V+ + T Sbjct: 41 VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRE-CGLKSVAEAANTPVALVFGRERVGLTNEE 124 + EA+A C VV T+AR R + P+ P + G V A A++FG E+ GL EE Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + H V I NP + SLNLA AV V+AYE A A ++E P + E Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYE--WAQAAGAAPLFTSPYQEDPATQAER-E 217 Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQ 239 + + HL L G+ +H +V+ + LR L A EL +L G++ E+ Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERH 273 >UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY Length = 243 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 87/187 (46%), Gaps = 18/187 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I IV VE TGN+G +AR M G NL LVNP + D A + A +I NA Sbjct: 8 FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNP-PELDEDAYRFSKHARYIIENAE 66 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRER 117 I++ +E +V TS S P L PRE K + N + +VFGRE Sbjct: 67 ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWNFSGN--IGIVFGREN 124 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL NEE++KC + I + EY +N+ A +I YE+ M + EE Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFME-----------KREEEGM 173 Query: 178 PLVDDLE 184 PL ++ E Sbjct: 174 PLAEEFE 180 >UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus RepID=C5A3L4_THEGJ Length = 243 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 83/159 (52%), Gaps = 19/159 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VLVE N+G VAR MK G + L LVNP + +S + A+ A DV+ NA IV+T Sbjct: 14 VVLVEPEGPANIGMVARTMKNFGFSRLVLVNPNLSEESYSYAVHA--RDVLKNATIVETF 71 Query: 67 DEALAGCSLVVGT---------SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 +EAL L VGT S R+ PW L+ + V L FGRE Sbjct: 72 EEALELFDLTVGTTGKPGRRFISYRAPLYPW--------ELRETLKGYTGEVGLFFGRES 123 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 +GL NEEL++ V I + +Y +NLA AV VI YE+ Sbjct: 124 IGLKNEELERLDLIVTIPTSEDYPVMNLAQAVAVILYEL 162 >UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae RepID=Q1QMV4_NITHX Length = 410 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 23/248 (9%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G ARAM LT L +VNP P+ A AAGA ++ + + DT Sbjct: 18 VILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFDT 77 Query: 66 LDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 ++ A+A C+L++ T+AR+ + +V AA V ++FGRER GL NEE Sbjct: 78 VEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNEE 137 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + NP ++SLNLA AV ++ YE W + V P+ + + E Sbjct: 138 VAMADRIITYPVNPGFASLNLAQAVLLMGYE----WF------KLVTRAALPFAMPERSE 187 Query: 185 R--------FYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 R F+ +L L F+R E ++N LR +FTR P Q+++ L G++ Sbjct: 188 RASQHQMQAFFDNLVSELDKVEFLRPAEKRDTMLVN-LRNIFTRMEPTKQDMHTLHGVVM 246 Query: 235 SIEQQNKG 242 +I + KG Sbjct: 247 AIAEGRKG 254 >UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12 Tax=Methanococcales RepID=Y1476_METJA Length = 230 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 5/159 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ I ++LV ++GN+GS+AR M G L +V +++A +A A +++ NA Sbjct: 1 MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTS-AR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 +T DEA+ V+ TS AR R L + P+E K + N + +VFGRE Sbjct: 61 KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEVKGN--IGIVFGRED 118 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 GL NEE+ KC V+I + +Y +NL+ AV VI YE+ Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEI 157 >UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO Length = 235 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 15/159 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M GLT+L +V + D++ A+ ++ NA I + Sbjct: 7 ISVVLVEPKYQGNIGAVARSMANSGLTDLRIVKTPIDEDARRRAMHGLY--ILDNARIYN 64 Query: 65 TLDEALAGCSLVVGTSARSRT------LPW-PMLDPRECGLKSVAEAANTPVALVFGRER 117 + D+A++G ++ GTS S++ +P P GL VALVFGRE Sbjct: 65 SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFWDNYGLNG------KRVALVFGRED 118 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 GL N EL KC++ + I NPEY NL+ AV +I YE+ Sbjct: 119 NGLNNYELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEM 157 >UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter RepID=Q4FLI9_PELUB Length = 237 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 10/241 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60 NI +L + + N+G+ ARA+K L +V P + P+ + +A + GA D+I NA Sbjct: 3 FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +TL+ A+ VV TSAR R ++ + LK + N +A +FG E GL Sbjct: 63 KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD--LKKID--FNKKIAFLFGSEASGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N E+ +Y + I NP++ SLNL+ +V +IA+ V A + + + + ++ Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176 Query: 181 DDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 D++ + L F + E P + N LR +F++ +E IL + AS+ + Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLEN-LRSIFSKMELSEKETRILSSVFASLSK 235 Query: 239 Q 239 + Sbjct: 236 K 236 >UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella RepID=A1S6F2_SHEAM Length = 225 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + +VLVE + N+G+ ARAMKTMG T L L+ + +A +A GA+D++ NA ++D Sbjct: 2 LSVVLVEPARAANVGAAARAMKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLD 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 + D+ A L++ T+AR R P L+P E + ++ ++ +ALVFGRE GL+N+E Sbjct: 62 SFDDLRAEFDLLIATTARERGSPRTFLNPEELAI-TLGQSGAQSMALVFGRESSGLSNQE 120 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 L +C + +Y SLNL AV V Y Sbjct: 121 LSQCDLFSYVPLAGDYPSLNLGQAVMVYTY 150 >UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales RepID=B7KUQ9_METC4 Length = 245 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 10/240 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G ARAM GL+ L LV P P A+GA+ V+ A + T Sbjct: 6 VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123 L EA+A ++ T+AR R + P E + + AE V L+FGRERVGL+N+ Sbjct: 66 LPEAIADLHFLLATTARERGQMKRVFAP-EDAMAATAERIGRGERVGLMFGRERVGLSND 124 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLAT-QENGEQVEHEETPYPLVD 181 E+ V E+ SLNLA AV ++ YE R A LAT + +GE + +P + Sbjct: 125 EVSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRAAGLATLRFSGEML----SPPATRE 180 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + + LE+TL GF + +R + R Q++ RG L ++ ++ + Sbjct: 181 AMLSLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKAR 240 >UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIP4_RHOVA Length = 263 Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 120/244 (49%), Gaps = 13/244 (5%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+LVE N+G+ ARAM GL L LV P P+ A A AA A +++ A + Sbjct: 12 IILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYPD 71 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123 L A+A +V T+ARSR L P+L P + + +AE AA+ ++FG+ER GL N Sbjct: 72 LATAVADLHYIVATTARSRFLAKPVLAP-DTAVTEIAERQAADLRCGVLFGKERTGLENS 130 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175 ++ + +P ++SLNLA +V + AYE R L G + + Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190 Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILA 234 +L FY HLE L GF+ + M N +R +F R P QE+ LRG++A Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250 Query: 235 SIEQ 238 + + Sbjct: 251 ILRR 254 >UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Methanomicrobiales RepID=A7I6L8_METB6 Length = 261 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 123/246 (50%), Gaps = 31/246 (12%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + I IVLV + GN+G AR MK G T L LV+P +A A+ A DV+GNA Sbjct: 1 MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDP-CPLGEEAKGRASHAQDVLGNAE 59 Query: 62 IVDTLDEALAGCSLVVGTSAR-SRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRE 116 I T+++ A S+VV T+ + S+++ PM PRE L+ A V+++FGRE Sbjct: 60 IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRE--LRERIGIAEGRVSILFGRE 116 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL N+E+++ I + EY +NL+ AV ++ YE +A L + P Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYE--LANLPS-----------AP 163 Query: 177 YPLVDDLE--RFYGHLEQTLLAT---GFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 Y L E Y H+++ L + F REN M +RR+ RA S+E + + G Sbjct: 164 YRLATPYEMGHLYRHIDRFLDSVHHPAFKREN----TMIMIRRILGRACLTSREASTVHG 219 Query: 232 ILASIE 237 +L E Sbjct: 220 LLRRTE 225 >UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67P01_SYMTH Length = 257 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 2/165 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + +VL + N+ ++ R M GL++L LV P + +A +I Sbjct: 8 LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 TL+ ALA C L +GT+ R R +L PR + +A VA++FG ER GL Sbjct: 68 RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 N L CH + I +P SLNLA A VIAYE+ MAW TQ N Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAW--TQPN 170 >UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas RepID=A0KMM3_AERHH Length = 230 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 83/153 (54%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLV + N+G+ ARAMKTMG + LV V + +A +A GA +V+ A Sbjct: 2 KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 DTL+EALA LVV T+AR R L P E + A+ + VA+VFG E GL+NE Sbjct: 62 DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 +L + + Y SLNL A+ + AYE+ Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYEL 154 >UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7Y1_FERPL Length = 230 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 22/234 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G L L N V +S A A A DV+ A V+ Sbjct: 2 IEVVLVELKIPENIGFIARVMKNFGFEKLVLYNCNVSKESYITA--AHAKDVLDKAVKVE 59 Query: 65 TLDEALAGCSLVVGTS-ARSR----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 L E L +LVVGT+ RSR + P P E + E A++FGRE G Sbjct: 60 NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEE-----LREMIKGETAILFGREDYG 114 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L +EEL+ C+ V++ + EY +N++ A VI YE+ + E E+ Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSKG---------KFEFEKEEIAT 165 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 D++R + E+ L+ + + E+ G++ L+R F RA E++ + GI+ Sbjct: 166 QKDVDRLVEYFEK-LMKSIWFPEHRIGRMKVVLKRAFGRAALTKYEVDAISGII 218 >UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G643_NOVAD Length = 251 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 26/244 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 IVLV N+G ARAM GL + LV+P P+ A AAGA V+ A + T Sbjct: 13 IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L EA+A CS V T+ R R + P+L P + V+ + + A++FG ER GL +++ Sbjct: 73 LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIVSASGRS--AIIFGPERSGLETDDV 130 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL-- 183 V + NPE+ SLNLA AV + AYE W +H + P V+D+ Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYE----W---------SKHVDLVQPTVEDMLP 177 Query: 184 ----ERFYGHLEQ--TLLATG--FIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 E F G EQ T+L F E+ LR + T+ E+ +RG+L++ Sbjct: 178 PAPQEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSA 237 Query: 236 IEQQ 239 + ++ Sbjct: 238 LRRK 241 >UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30 Tax=Enterobacteriaceae RepID=C9XV28_CROTZ Length = 239 Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 1/156 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + I+LV + N+G+ ARAMKTMG T L +V D A +A GA D++ N Sbjct: 11 LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120 DTL AL V T+ARSR P++ +AA PV ALVFGRE GL Sbjct: 71 RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 TNEEL + +Y SLNL AV V Y++ Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQL 166 >UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae RepID=Q1DAL2_MYXXD Length = 243 Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 5/223 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 + + +VL +T T N+G+VAR M G + L L P++K A LA + V+ + Sbjct: 5 EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 L EAL C VGT++R++ +L P E + E+ VALVFG E+ G+++ Sbjct: 65 TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 E+L +C +AI + S+NLA + V+ Y L EE P + Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLTP-----TAAVEEAPGAKLGT 179 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225 L + +L F+ P V+N+L + RAR +E Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQRE 222 >UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VNS2_ALCBS Length = 223 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 5/156 (3%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE + N+G+ ARA+KTMG + L LVNP + A +A ++DV+ A IV Sbjct: 2 DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNP--GDMTAAHWVAHHSNDVLEQAMIV 59 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVGLT 121 D+L +AL L +G +AR R +D C VA N+ VA+VFGRE GLT Sbjct: 60 DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCA-ALVAGKGNSVQRVAIVFGREASGLT 118 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 +EL C +I + SLNLA AV + A+E+R Sbjct: 119 GDELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELR 154 >UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii RepID=A8J9D1_CHLRE Length = 154 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 2/152 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G+ ARAMK GL +L +V P P+ A+A ++ A+D++ A + D+ Sbjct: 3 VILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYDS 62 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNEE 124 ++ A+A V +AR+R + P + ++ + AA P A L+FGRE GLTNEE Sbjct: 63 VEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNEE 122 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 + + + I ANP Y LNLA A+ ++YE+ Sbjct: 123 VALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154 >UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A5GRX6_SYNR3 Length = 248 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 113/237 (47%), Gaps = 9/237 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59 M ++ +VLVE S N+GSVAR G+ +L LV P P D QA +A + + Sbjct: 1 MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--VALVFGRER 117 + +L++A+A C VV S R L P+ L+ + E P VALVFGRE Sbjct: 61 CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQP-ALQWLLEPKPGPNHVALVFGRED 119 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQV-IAYEVRMAWLATQENGEQVEHEETP 176 GL + EL + I + Y SLNL+ AV + +A R+A + + P Sbjct: 120 HGLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS----SPP 175 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 P LE E+ LL GF+ + M KLR+L R+ P E+ +LRG++ Sbjct: 176 LPAHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMV 232 >UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7Q2_KORCO Length = 246 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 19/239 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + ++ ++LVE N+G +ARAMK G L +V P+ + +AIA A A DVI Sbjct: 1 MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60 Query: 62 IVDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I+ TL+EA G L++GT+AR SR P L S+ + + LV GRE +GL Sbjct: 61 ILTTLEEARRGVDLMIGTTARVSRYSVERRAIPIRDLLSSI--SWDAVYGLVLGRESIGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 T EEL C I ++ +Y +LN+A A +I YE +A+ ++ + E + P Sbjct: 119 TTEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAF----KDSSRFEVKPVPREAR 174 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARP-------ESQELNILRGI 232 + + R+ G + L G +R+ + + +RR+ R P SQ L I++ + Sbjct: 175 EVMIRYIGEVIDLL---GGMRDRE--RFLFTMRRMIERTFPCGISEEEASQALGIIKAV 228 >UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus marinus F1 RepID=A3DMM1_STAMF Length = 231 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 24/243 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +R+VLV + N+G +AR G+ L+LV P + +A+ AA ASD + A IVD Sbjct: 3 VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADLE-EALRYAAKASDYLKKAIIVD 61 Query: 65 TLDEALAGCSLVVGTSARSRTL------PWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 L +A+ LVV T+A+ ++ P+ D E + + +A++FGRE Sbjct: 62 DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVE-----MVKGRVNRLAILFGREST 116 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLT +EL+ V I ANPEY LNL+ AV V +E+ W N V E P Sbjct: 117 GLTRKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEI---W-----NIRGVRAENIPPS 168 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI----LRGILA 234 D F L + +++ ++M +++ R+R E + LR +L Sbjct: 169 AGRDEIEFILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLG 228 Query: 235 SIE 237 +E Sbjct: 229 KLE 231 >UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria RepID=B8EQU7_METSB Length = 281 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 124/250 (49%), Gaps = 17/250 (6%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------LVKPDSQAIALAAGASDVIGNA 60 I+LV N+G ARAM GL++L LV+P A A AAGA ++ A Sbjct: 19 IILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEGA 78 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVG 119 + DT +EA+A + V T+AR R P+L P E ++A A ++FG ER G Sbjct: 79 KLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERTG 138 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL--ATQENGEQVEHEETPY 177 L+N+E+ + NP Y+SLNLA AV +I YE W+ +T+ V +P Sbjct: 139 LSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYE----WMRASTEAKAPFVADPRSPP 194 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASI 236 + + F+ +LE L GF R VM + ++ +F R +Q+++ LRG + + Sbjct: 195 APREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRGAIVRL 254 Query: 237 EQQNKGNKAE 246 + G +AE Sbjct: 255 VE---GPRAE 261 >UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RXM1_THEPD Length = 257 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 12/234 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + + + + VE + N+G +AR+MK L L+LV P ++ A A+D++ NA Sbjct: 12 LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWP-MLDPRECGLKSVAEAANTPVALVFGRERVG 119 IV +L E + LV T+ P + P E + S+ + +V GRE G Sbjct: 72 VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGE--MASLFAESTGSKLVVIGREDWG 129 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ EEL C V I ANPEY SLN + A ++ YE+ + + Q++ E+ P Sbjct: 130 LSAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLER--------PP 181 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 +++E F HL G+ E +++ ++RL R +L IL G++ Sbjct: 182 REEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLV 234 >UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus RepID=Q46JZ1_PROMT Length = 245 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 12/237 (5%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAH 61 + ++++LVE + N+GSVAR + + L LV+P +Q A +A ++ A Sbjct: 5 KTLKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAK 64 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERV 118 + + L+ AL+ CS ++ T R P+ D GLKS E +ALVFGRE Sbjct: 65 VYEDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSERE---DTIALVFGREDR 121 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPY 177 GL+NEEL K + +++ + +Y SLNL+ AV ++ ++ ++ L + ++ +P Sbjct: 122 GLSNEELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQLNDLDLLKRHTKI---SSPA 178 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 L+ LE LL GF+ ++ M K+++L R + E+ ++RGI++ Sbjct: 179 NLI-KLEDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIIS 234 >UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R186_9DELT Length = 304 Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 102/227 (44%), Gaps = 4/227 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVDT 65 IVL N+GS AR MG+ +L +V + + A A+ +I T Sbjct: 19 IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 + EALA V+ TSAR PR ++ A VAL+FG E GLTNE+L Sbjct: 79 VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 CH I ++SSLNLA AV V+ YE+ A Q V V +LE Sbjct: 139 YLCHQLTTIP-TADFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195 Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 YGH+EQ L GF+R M +R L R ++E ++RG Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGF 242 >UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae RepID=A5UK71_METS3 Length = 301 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 33/250 (13%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61 NI IV VE GN+G +AR M GL NL L+NP + P +A A ++ NA Sbjct: 68 NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPTLTP--EAFYQATHGKYIVDNAK 125 Query: 62 IVDTLDEALAGCSL-----VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 I TLDE + G + S L + P G K++ N A++FGRE Sbjct: 126 IYHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLG-KNIN--TNNKTAILFGRE 182 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV--RMAWLATQ--ENGEQVEH 172 GLTNEE++ C V+I +P Y LN++ A +I YE+ M + E +E Sbjct: 183 GNGLTNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMHEYPVEGLEESTAIEK 242 Query: 173 E---ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229 E + Y L+D L+ I E+ + + + RA +E + L Sbjct: 243 EYVLKDMYDLIDGLD---------------IPEHKKKNGLKSFKNIINRAYITGREAHTL 287 Query: 230 RGILASIEQQ 239 +GIL ++ + Sbjct: 288 KGILRRLKMK 297 >UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY Length = 235 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 19/161 (11%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G + L L+NP + +S A A+ A DV+ NA I+D Sbjct: 2 ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPNLTEESYAYAVHA--RDVLENALILD 59 Query: 65 TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 + ++AL VGT+ R+ +PW ++ + + V + FGR Sbjct: 60 SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELV--------GLIKDYPGEVGIFFGR 111 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E +GL NEEL + I + EY +NLA A V+ YE+ Sbjct: 112 ESIGLKNEELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYEL 152 >UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0D5_DESRD Length = 256 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 10/242 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59 +L N+ +VL + N+GS ARA +G NL LV P +A LA G +V+ + Sbjct: 7 LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERV 118 + L AL+ V GT+AR+ + P + + AA VA+VFG E Sbjct: 67 LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NEE+ C + I E +SLNL+ AV ++ YE W +G++ P Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYE----WFKA-SSGKRFLRTTPPQS 181 Query: 179 LV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 + ++ E +++ LL F ++++ M +RR F R E N+L GI Sbjct: 182 RLCTHEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQ 241 Query: 236 IE 237 ++ Sbjct: 242 VK 243 >UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria RepID=Q02AK8_SOLUE Length = 252 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 7/234 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 N+R+VLV T + N+G+ ARAM G + L +V P +A + A GA+ ++ A Sbjct: 19 NLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREARS-AVGAAPLLQKAEEF 77 Query: 64 DTLDEALAGCSLVVGT-SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 ++ A+A C LVVGT S R L P+ + PVAL+FG E+ GL+N Sbjct: 78 PSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLSN 137 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 E+L CH+ + I + S+NL AV + YE+ A + E++ + Sbjct: 138 EDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYELARDPKAALASPEKIRSANA-----GE 192 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 LE+ L + L +G++ K+RRL R ++ ++ G+L I Sbjct: 193 LEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQI 246 >UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2 Length = 241 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 100/240 (41%), Gaps = 22/240 (9%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NI VL E N+GS RA+ G L LV P+ + +A + ++ Sbjct: 5 IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSR----TLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 +L EALA S VVG S RSR + P P L AA PVA VFGRE Sbjct: 65 ETFASLGEALANVSYVVGFSGRSRGERQAVSLPEFAPTLTAL-----AATAPVAFVFGRE 119 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL N +++C ++I +P Y SLNLA AV + Y +R G E P Sbjct: 120 DRGLDNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIR---------GLATSAEPLP 170 Query: 177 YP-LVDDLERFYGHLEQTLLATGFIRENHPGQ---VMNKLRRLFTRARPESQELNILRGI 232 P L D L T GQ + +R L R+RP E+ ++ I Sbjct: 171 SPDLADQASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAI 230 >UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97 Tax=Enterobacteriaceae RepID=LAST_ECOLI Length = 228 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 1/153 (0%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I I+LV + N+G+ ARAMKTMG ++L +V+ + +A G+ D+I N + Sbjct: 3 ITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFP 62 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRE-CGLKSVAEAANTPVALVFGRERVGLTNE 123 TL E+L V T+ARSR P E L + + ALVFGRE GLTNE Sbjct: 63 TLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNE 122 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 EL + +Y SLNL AV V Y++ Sbjct: 123 ELALADVLTGVPMVADYPSLNLGQAVMVYCYQL 155 >UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Q0_DESAH Length = 226 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 28 MGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVDTLDEALAGCSLVVGTSAR---S 83 MGL L +V P ++A A A+ ++ I TL +ALA VVGT+AR Sbjct: 3 MGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLGGQ 62 Query: 84 RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSL 143 R + PR L+ N VAL+FG E GLTN E+ CH + I +SSL Sbjct: 63 RLVE----SPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIP-TLGFSSL 117 Query: 144 NLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL--VDDLERFYGHLEQTLLATGFIR 201 NLA AV ++ YE+ +A + G +E ++ L V +LE Y L L G++ Sbjct: 118 NLAQAVVIVCYELLVA--VEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVN 175 Query: 202 ENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 +P +N++R+ +R + ++ E I++G++ I Sbjct: 176 PENPDFWLNRVRQFLSRIKIQAGETGIVKGVIDRI 210 >UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5 Length = 233 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 14/236 (5%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I+L+ N+G+ ARAMK GL L +V P P+ QA + A GA ++I +A I D+ Sbjct: 8 IILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKIFDS 67 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L++++ + T+ R + + + L + V ++FGRE GL+NEE+ Sbjct: 68 LEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLDY---PNSEKVGIMFGRENNGLSNEEI 124 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 + + I ++SSLN+A AV +I YE L + H +++E Sbjct: 125 AFANKIITINTT-KFSSLNIAQAVIIICYE-----LFRNSTPREDVHNIQKLATKEEIEH 178 Query: 186 FYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARP-ESQELNILRGILASIEQ 238 F +L L GF + + P N + +FTR S E+ L+GI+ S+ Q Sbjct: 179 FLVNLFGKLDKAGFFKAPDKKPAMQQN-ITNIFTRINSLSSPEVQTLQGIIKSLNQ 233 >UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=B4UHH1_ANASK Length = 269 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 24/256 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------KPDSQAIA--------- 48 IR+VL N+G+ AR MK GL+ L +V P P + AI Sbjct: 5 KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64 Query: 49 --LAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARS-RTLPWPMLDPRECGLKSVAEAA 105 +A ASD++ A I L A+ + V GT++R+ PW L+PR + V +A Sbjct: 65 RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRAVEGRPW--LEPRGLAAELVRRSA 122 Query: 106 NTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 + VA+VFG ER GL++ EL+ C I Y S+NLA AV V+AYEV A Sbjct: 123 DGEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGA 182 Query: 166 NGEQVEHE---ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222 + + P ++ +E + + L A G++ +P ++ RRL RA P Sbjct: 183 APAEAPPGRGGDAPA-RIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPT 241 Query: 223 SQELNILRGILASIEQ 238 +E+ +L G L S+++ Sbjct: 242 QREVELLLGALRSLDR 257 >UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8Q9_IGNH4 Length = 228 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/245 (32%), Positives = 110/245 (44%), Gaps = 38/245 (15%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62 +R+VLVE N G + R K + + V P D + + AA D + + Sbjct: 2 KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61 Query: 63 VDTLDEALAGCSLVVGTSA--------RSRTLPWPMLDPRECGLKSVAEAANTP--VALV 112 VD EAL G LVV TSA R LPW + E P + LV Sbjct: 62 VDDYKEALEG--LVVCTSAKVSSADPLRDFVLPWEL-----------KEKFGEPERLTLV 108 Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ-ENGEQVE 171 FGRE VGLT EEL++C + + A+P+Y +NL+ AV V+ +EV W + E G Q E Sbjct: 109 FGRESVGLTREELKECDALLHVPASPQYPVMNLSHAVAVVLWEV---WKQYRIEKGAQPE 165 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILR 230 P DL G E+ LA I+ E +V ++RL +A QEL L Sbjct: 166 R-----PDERDLRLALGVAER--LARALIKDEAKRERVTVAIKRLLAKA--TRQELRNLL 216 Query: 231 GILAS 235 +L+ Sbjct: 217 YLLSK 221 >UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U6V8_MARAV Length = 226 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 7/166 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLVE N+G+ ARA+ TMG + LWLVN + +A LA G+ ++ NA I Sbjct: 2 KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120 L L++GTSA+ R +P L+SV V ALVFGRE GL Sbjct: 62 PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 NEEL C Y SLNL+ AV + A+E ++ LA Q N Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWE--LSGLARQSN 163 >UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQC6_FIBSS Length = 269 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 113/250 (45%), Gaps = 33/250 (13%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD---SQAIALAAGASDVIG 58 ++ R+VLVE H N+G VARAM L L++V P K D ++ AA + D++ Sbjct: 1 MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYP--KRDKVLDKSYHTAANSHDILD 58 Query: 59 NAHIVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 NA +V ++A+ CS V S R + ++ M+ L + T +ALVFGRE Sbjct: 59 NAKVVHKFEDAIGDCSCAVAYSRRIFASSIKHTMVQ----NLSDMLPEDGT-IALVFGRE 113 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHE-- 173 GL EE+ C Y I P SLNL AV + YE+ R LA E + Sbjct: 114 SCGLALEEVNACTYQCEIPV-PGLMSLNLGQAVSISLYELCRSGALANGEGRAKRTTRGV 172 Query: 174 -ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK------LRRLFTRARPESQEL 226 ET + ++ F L++ L GQ ++ L L R P EL Sbjct: 173 AETGPATIQQIDGFKKFLDRYLT----------GQYHDQAWRDSFLNTLLQRLHPTRNEL 222 Query: 227 NILRGILASI 236 + L G+L ++ Sbjct: 223 SALFGLLRNL 232 >UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6J8_DESK1 Length = 234 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +RIVLV N+G +AR + L++V P V +A+ AA D + A + D Sbjct: 2 LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKP-VASIEEALNYAARGKDFLLKARVTD 60 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA---NTPVALVFGRERVGLT 121 +LDEA+ G +V TS + ML + L AE VA++FGRE GLT Sbjct: 61 SLDEAIKGVDMVAATSDEGYSAG-DMLR-QAVDLNGFAEKIFPRTRSVAILFGRESTGLT 118 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EE+ K V I ANP Y +LN++ AV ++ +E+ T N + +ET L+D Sbjct: 119 REEISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIPPLASKETLRQLLD 178 >UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN85_9DELT Length = 252 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 22/247 (8%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60 + NI ++L ++ N+GSVARA MG + L + +A LA ++++ + Sbjct: 1 MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60 Query: 61 HIVDTLDEALAGCSLVVGTSAR------SRTLPWP----MLDPRECGLKSVAEAANTPVA 110 L++AL G V TSAR LPW ++ P E + A Sbjct: 61 EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRP---------ETLDQDTA 111 Query: 111 LVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV 170 LVFG E GL N E++ C ++I + SLNL+ AV ++ YE A + + Sbjct: 112 LVFGPEDKGLANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFKHVPAART--RHI 169 Query: 171 EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230 ++P + ++ + ++++TLL F++ ++P M L+R + E N+L Sbjct: 170 PSWDSPPVTQEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLM 229 Query: 231 GILASIE 237 GI I+ Sbjct: 230 GICRQIK 236 >UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus RepID=Q31AG9_PROM9 Length = 249 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 8/238 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60 N++++LVE + N+GSVAR + L +V+P S +A +A + + Sbjct: 7 FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV--AEAANTPVALVFGRERV 118 I D L+ A+ C LV+ + R + + E + + E N +A++FGRE Sbjct: 67 KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINN-LAIIFGREDR 125 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+N EL + I + SLNL+ AV ++ YE+ +++ N + E E Sbjct: 126 GLSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNK---SSKRNFNK-ELEVFNLA 181 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + + +E+ LL G++ E+ ++K + +RA E+N+LRGI+ I Sbjct: 182 SSKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQI 239 >UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIE5_9BACT Length = 278 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 7/232 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I ++LVE + GN+G++AR M ++L +V + P+ LA + +++ N + Sbjct: 7 FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKV--PEKNDFYLAMHSEEILENVN 64 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 I TL++A+ G V+ S R P + K V ++ + LVFGRE GLT Sbjct: 65 IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 + E + C ANP + SLNLA AV + +E+ ++ G++ + + Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYYNSASG----K 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 +L+ ++ + + GF + L ++ + P+ L LR + Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMF 231 >UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YEM3_AERPE Length = 243 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 17/166 (10%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ +RIVLVET N+G VAR + ++LV+P + +A AA A+ + A Sbjct: 1 MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASLE-EAKRYAARAAWRLDAAR 59 Query: 62 IVDTLDEALAGCSLVVGTSA--------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113 +V L+EAL G S + TS+ R+ PW + V A VA+VF Sbjct: 60 VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAE--------VLAATPGTVAIVF 111 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 GRE VGLT E+ C + +I A+P Y SLNL+ A + YEV A Sbjct: 112 GRESVGLTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKA 157 >UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT47_TERTT Length = 233 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + +LV + N+G+ ARAMKTMG L LV + D +A +A GA D++ +A Sbjct: 2 LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L L++GT+AR R L P E L S + LVFG E GL+N++ Sbjct: 62 DLASLKPDFDLLIGTTARERGSARRYLSPPE--LNSQLSQQSGRSGLVFGCEASGLSNDQ 119 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-----RMAWLATQENGEQVEH 172 L C + I Y SLNL AV V +Y + R+ + Q++H Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGLEDEAPDARQIQH 172 >UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C4T4_THAPS Length = 167 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 34/161 (21%) Query: 28 MGLTNLWLVNP---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84 MG +L LV P V + I A+GA DV+ NA TLD+A+ G ++V GT Sbjct: 1 MGFNDLTLVKPHDLKVLHRQKVIQRASGAMDVLTNAQTYSTLDDAVDGFNVVCGTG---- 56 Query: 85 TLPWPM---------LDPREC--GLKSVAEAANTP---------------VALVFGRERV 118 +P+ M ++PR GL S A N +ALVFG E+ Sbjct: 57 -MPFDMYQTRLEREYVEPRIYFDGLISNVIANNHSTDDTNDRHQHSNSIRLALVFGSEKT 115 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 G+T ++ CH + I NP++ SLNLA AVQ+IAY+ R+A Sbjct: 116 GMTESDMDTCHVMLGIPTNPQFGSLNLAAAVQLIAYDWRVA 156 >UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RS14_OSTLU Length = 445 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 58/224 (25%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN--PLV------------------- 40 L N+R V+ N+G+ AR M+ G+ +L LV+ P V Sbjct: 62 LSNVRFVMCAPQGPANVGAAARVMQNFGIYDLALVDVGPFVLTTTTRSGDATREISDEAS 121 Query: 41 -----KPD----------------SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGT 79 P+ +A+ A A ++ +A D +EAL GCS V+ T Sbjct: 122 EGEGRAPERASEVLGSEARTTPLCEEAMRYACAADWLLADAERCDDAEEALRGCSFVLAT 181 Query: 80 SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAA--- 136 +AR R+ P++ RE + EA VA++FG ER GLTN+EL H VAI Sbjct: 182 TARPRS-GTPLMTAREAAERVREEAKRGKVAVLFGNERTGLTNDELSWAHAAVAIPTAGA 240 Query: 137 ------NPEY------SSLNLAMAVQVIAYEVRMAWLATQENGE 168 + +Y +SLNL+ AV ++AYE+ MA NGE Sbjct: 241 GKICRKSLKYTGGTGPTSLNLSHAVGILAYEIFMACGGEATNGE 284 >UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28473_ARCFU Length = 226 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67 +LVE N+G +AR K G+ L L V +S A A A DV+ NA +V+ L Sbjct: 1 MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTA--ANAKDVLENAVVVEDLQ 58 Query: 68 EALAGCSLVVGTSA----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 E L +L+VGT+ + L +L P + L SVA+ VA++FGRE GL NE Sbjct: 59 EFLQRMNLIVGTTGIPGGDYKYLRKELLAPED--LPSVAKGR---VAVLFGREDYGLYNE 113 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL+ CH V + + EY +N++ A VI Y +R E+V+ E+ D+ Sbjct: 114 ELEMCHVLVRVPTSEEYPVMNVSHAAAVILYFLR--------EIERVQ-EDDEIATFRDI 164 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELN-ILRGILASIEQQ 239 E +L + L + E+ + + RR+ RA + E LN I R ++ I++ Sbjct: 165 EVTLSNLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRM 223 Query: 240 NK 241 N+ Sbjct: 224 NR 225 >UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SV68_PHYPA Length = 287 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 111/261 (42%), Gaps = 50/261 (19%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L+ +R+VLV H GN+GSV G+ ++Q +A + + + Sbjct: 24 LERVRVVLVSPQHAGNVGSVNPQCDFRGV------------EAQTMAANVTSRSKLEHIR 71 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + DTL EAL CS+ VG + RS L P D R L + + +A+VFGRE GLT Sbjct: 72 VTDTLPEALKDCSMAVGFTRRSGILRIP--DTRLANL-CIPPLDSLNLAIVFGREDRGLT 128 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP--- 178 NEEL C + +I + SLNL+ AV V+ + EQ+ HE+ P Sbjct: 129 NEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLY----------EQIPHEQAHDPSNY 178 Query: 179 ------------------LVDDLERFY----GHLEQTLLATGFIRENHPGQVMNKLRRLF 216 V++L R + Q +A G +++ +RR+ Sbjct: 179 VPIHSTSFKNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRML 238 Query: 217 TRARPESQELNILRGILASIE 237 R P +EL L G L +E Sbjct: 239 LRTGPSLKELGFLHGFLTMVE 259 >UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria RepID=B0CFB1_ACAM1 Length = 243 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHIVDT 65 +LVE+ N+G+ ARA+ TMG T+L LV P +S+ A LA G+ V+ A I Sbjct: 5 FILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPIYQN 64 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124 L +AL T+AR R + + RE + A+ VA VFG ER GL + Sbjct: 65 LSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLNRHD 124 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 + C I Y SLNLA AV V ++ Sbjct: 125 IDCCDLITTIPQGNPYPSLNLAQAVMVYSF 154 >UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ3_9BACT Length = 240 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 16/237 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ + ++L N+G +ARAM G ++L + A+ A ASD++ NA+ Sbjct: 1 MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECGLKSVAEAANT--PVALVFGRERV 118 +T +E ++ +V+G + RS P+ + P E V+E +T V L+FG E Sbjct: 61 HPETFEELISTSDVVIGFTPRS---PFSTNNLPYEELKDFVSETVSTGLKVGLLFGNEAS 117 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL N+EL C + V++ + +Y S+NLA AV V ++++ E ++ E E Sbjct: 118 GLNNKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK-----DIEPDKEAEAEYADRN 172 Query: 179 LVDD-LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 + L+R HLE + + +P + ++R++ R +E ++ + Sbjct: 173 TIGTLLQRIKDHLE----LIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFG 225 >UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG9_ELUMP Length = 225 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 13/182 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I I+LV+ + N+G+ ARAM GL++L + + P+ + A GA D++ A I D Sbjct: 2 ITIILVKPRNPNNIGASARAMANFGLSDLRIAGAHI-PNLEEAQAAVGAEDLLKKAKIFD 60 Query: 65 TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122 L +ALA C+ TS ++R ++ L ++ +A+VFG E+ GL+ Sbjct: 61 NLQDALADCNFAFAATSLKNRNTQKEIV-----SLPNINNHIKRGKIAVVFGSEKTGLSV 115 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 ++++ C + I + S+NLA AV ++ YE A +N + ++ ++T P D Sbjct: 116 KDIELCDAVLNIPTTTKQPSVNLAQAVNLVCYET-----AKTKNFKTLKQQKTNLPSFKD 170 Query: 183 LE 184 ++ Sbjct: 171 ID 172 >UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ Length = 232 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 37/250 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA--HIVD 64 + VE N+G++AR K +L+L+NP V +A +A A D++ A + ++ Sbjct: 5 VFFVEPEKVDNIGAMARVCKNFN-ADLYLINPKVDNYEKAFVVAKHAQDLLQKAIENKLN 63 Query: 65 TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVAL--VF 113 ++DEA + VGT+ RS PW + + AN+ + L Sbjct: 64 SIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAE----------RFANSDIKLGIFI 113 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 GRE +GLTNEEL K + V I AN EY LN A +I YE+ + ++E H Sbjct: 114 GRESIGLTNEELSKMDFIVTIPANKEYPILNATHATAIILYEL---FKHSKEG-----HV 165 Query: 174 ETPYPLVDDLERFYGHLEQTL--LATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 P + ++ ++++ + L R+ + +M R+L T+ S+E N L G Sbjct: 166 NLALPKKEQIDVLLDYVKKIIDKLPQPDYRKEYYFIIM---RKLITQGIINSREANTLIG 222 Query: 232 ILASIEQQNK 241 SI + K Sbjct: 223 FFRSIYENLK 232 >UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL7_9EURY Length = 234 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 31/242 (12%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59 M++NI++ VE + N+G AR +K + ++LVNP K + + AI + A D+I N Sbjct: 1 MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSA---RSR-----TLPWPMLDPRECGLKSVAEAANTPVAL 111 A I+ L+ + S VVGT+A +SR + P + G KS+ + L Sbjct: 61 AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRG-KSIEN-----MTL 113 Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----AWLATQENG 167 + GR+ GL +EEL +C+ V I + Y +LN++ A+ ++ Y + +W QE G Sbjct: 114 LIGRDNTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLYALTAQKPSSW--PQEIG 171 Query: 168 EQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227 E Y DL ++ + +IR+ V + RA P +E+N Sbjct: 172 EL-------YADSSDLRMIKSLFGASVDSNPYIRKKE--TVKKAFENMLVRANPTKKEIN 222 Query: 228 IL 229 L Sbjct: 223 AL 224 >UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus RepID=A9WAF6_CHLAA Length = 239 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 7/237 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + +I ++L + N+G+V RAM G +L LV+P + A+A V+ N Sbjct: 1 MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 + L EA+A +VGTS R LPW D R+ ++ AA+T PVA++FG E G Sbjct: 61 VHAHLSEAIADIRYLVGTSDRPHPGLPWRN-DVRQWANETRQRAASTGPVAILFGSEGNG 119 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ +EL C + + +Y LNLA AV ++ YE++ E T Sbjct: 120 LSRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQVTTPLAPPPPPGEPPAT---- 175 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + E Y + + T F++ + +LR + RA ++ +L +L + Sbjct: 176 LAARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREV 232 >UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ Length = 209 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 96/224 (42%), Gaps = 22/224 (9%) Query: 25 MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84 M G+ +L LV + D A + ++ N DTL+EALA C + + TS Sbjct: 1 MVNFGIDDLALVKG-CEIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIK- 58 Query: 85 TLPWPMLDPREC-GLKSVAEAAN-----TPVALVFGRERVGLTNEELQKCHYHVAIAANP 138 P D R KS+ E + AL+FGRE GL EL C + I NP Sbjct: 59 ----PEGDKRWFRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNP 114 Query: 139 EYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLAT 197 ++ LNL+ AV ++ YE+ R + + V +EE ER + L T Sbjct: 115 KFPILNLSHAVGIVLYEIYRDGNHKNPKKRKAVSNEE--------FERLVDRIMDLLEET 166 Query: 198 GFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + R + LRRL +R P+ E L GI +I++ + Sbjct: 167 SYPRRRL-DRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209 >UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J096_CHLRE Length = 324 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 22/177 (12%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-----QAIALAAGASD 55 +L ++R+VLV H N+G+VARA NL++V P + +A +A G S Sbjct: 22 LLSDVRVVLVAPKHEANIGAVARAAANFECLNLYIVAPRCDGAAAGWTGEARKVACGDS- 80 Query: 56 VIGNAHIVDTLDEALAGCSLVVG----TSARSRT----------LPW--PMLDPRECGLK 99 V+ A +VDTL++ALA S +G T A RT P+ P+ P Sbjct: 81 VLDRAVVVDTLEQALADTSSSIGFTRRTGAARRTHASLGHLLAEFPFALPLQPPPVAVPT 140 Query: 100 SVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 S A A ALVFGRE GLT EL+ C Y AI S+NL+ AV + E+ Sbjct: 141 SAAAAGPCATALVFGREESGLTEAELRLCSYASAIPTGRVQPSMNLSHAVAAVLAEL 197 >UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola RepID=Q73KY3_TREDE Length = 251 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 7/159 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHI--- 62 I+L + N+G+V R M G ++L + D ++ + LA AS V A Sbjct: 7 IILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYPP 66 Query: 63 -VDTLDEALAGCSLVVGTSARSRTLPWPM-LDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++ L EA + CS+++GTS R+ + + P + L + + + LVFG ER GL Sbjct: 67 TIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCL-DLKKFYGGRLGLVFGNERTGL 125 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 +EEL C + V I A ++ S NL+ AV ++ Y + +A Sbjct: 126 IDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIA 164 >UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q0C6T9_PELCD Length = 166 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 66/126 (52%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M + IR++LVE GN+G VARAM G++ L LVNP +A A A+ ++G A Sbjct: 5 MSKRIRVILVEPQSPGNIGMVARAMGNFGVSELRLVNPCTYLHPEARKFAVRAAPLLGKA 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L ALA + V + R+ L +LD + + A V LVFGRE GL Sbjct: 65 RVFPDLASALADLPMSVAATRRAGKLRGELLDVADAARLAAGLPAVEGVGLVFGREDAGL 124 Query: 121 TNEELQ 126 T++E+ Sbjct: 125 TSDEVS 130 >UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba RepID=B0EAZ5_ENTDI Length = 350 Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 5/150 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLV H N+G+V R G+ L++VNPL K ++I ++ + I A I + Sbjct: 97 ISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVICN 156 Query: 65 TLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +L+E C+L+VG +AR + ++ +E G + + LVFG E GL Sbjct: 157 SLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAG--DMLSTMKGCLGLVFGNESNGLN 214 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQV 151 EE C I Y LNL+ AV + Sbjct: 215 TEECDACDLLNKIDIRSHYPVLNLSHAVGI 244 >UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q01FK7_OSTTA Length = 384 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 60/215 (27%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLV----NPLVKPDS------------- 44 L+N+R VL N+G+ ARAM+ G+ L L N L + D+ Sbjct: 55 LENVRFVLCAPQGAANVGACARAMQNFGVYELKLCEVGPNVLERDDAGETAATRGTESDA 114 Query: 45 ---------------------------QAIALAAGASDVIGNAHIVDTLDEALAGCSLVV 77 +A+ A A ++ +A ++ ALAGC+ V+ Sbjct: 115 ERILDEASEGEGKTPERAANQTLPLSAEALRYACAADWMLEDAERCADVEAALAGCTFVL 174 Query: 78 GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL------------ 125 T+AR RT P++ RE K EA VA++FG ER GLTNEEL Sbjct: 175 ATTARPRT-GTPLMTAREAAKKVAEEAKRGKVAVLFGNERTGLTNEELAWASAAVVVPTA 233 Query: 126 ---QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 + C + +SLNL+ AV +IA+ ++ Sbjct: 234 GAGKLCRKSLKYTGATGPTSLNLSHAVGIIAHRMK 268 >UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHK3_BDEBA Length = 261 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 16/241 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IRIVLV T + N+G+ +RAM MG+ L L++P + +A AA + N Sbjct: 7 IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-------NTP--VALVFGR 115 + DE + + + +R + + LK +A+ A + P V LVFG Sbjct: 67 SWDEFMKQEPESIKVAFTARDGKGRQVRDVDEVLKDIADKAPQFQVESDVPYVVHLVFGP 126 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEHE 173 E GL E+L+ ++ I + SLNLA A + Y +R W T+ +G +V Sbjct: 127 EDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRRA 186 Query: 174 ETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 +D LE+ GF + V LRR+ + P +EL IL + Sbjct: 187 PQGIDGIDPEATLKTWLEE----MGFDLTRQRKINVFTVLRRMLLQNTPTKKELVILETV 242 Query: 233 L 233 L Sbjct: 243 L 243 >UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H8_9CHLO Length = 467 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 44/198 (22%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP----LVKP--------------- 42 L N+ VL N+G +AR M+ G+T+L +V P L P Sbjct: 75 LDNVCFVLCRPQGPQNIGGIARVMQNFGVTDLRIVAPEPGALAPPFDAADEYDRAIHPPE 134 Query: 43 -------DSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE 95 +A A A ++ +A T DEALA + V T+AR R + D R Sbjct: 135 VRARAPLSDEAHKFAVHADWLLRDARRCATADEALADVAFVAATTARPRE-NLSIADVRA 193 Query: 96 CGLKSVAEAAN-TPVALVFGRERVGLTNEELQKCHYHVAI----------AANPEY---- 140 AAN T VA+VFG E GLTN+EL + + V I ++ Y Sbjct: 194 ASEVLRRHAANGTKVAVVFGNEATGLTNDELARANLGVMIATSAATSSPASSRKRYTGAK 253 Query: 141 --SSLNLAMAVQVIAYEV 156 +SLNL+MAV V+AYE+ Sbjct: 254 GATSLNLSMAVGVVAYEL 271 >UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FIG4_9CHLO Length = 506 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 23/145 (15%) Query: 37 NPLVKPDSQAIALA------AGASD-VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWP 89 NP P S A L A A+D ++ +A DT EA++ C+ V+ T+AR R P Sbjct: 169 NPADDPASPAPPLCDEAYRFACAADWLLADAKRCDTALEAISDCTFVMATTARPRGN-VP 227 Query: 90 MLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAI--------------- 134 ++ R EA VA++FG ER GLTNEEL + H VAI Sbjct: 228 LVTARVAAEMLAKEAKRGKVAVLFGNERTGLTNEELAQAHACVAIPTAGQGTLCRRSLKY 287 Query: 135 AANPEYSSLNLAMAVQVIAYEVRMA 159 +SLNL+ AV V+AYE+ MA Sbjct: 288 TGGTGPTSLNLSQAVGVLAYEMFMA 312 >UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699FF1 Length = 92 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Query: 150 QVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM 209 Q++AYEV +LA+ E ++ + LE F+ HL Q L GF +++ Sbjct: 1 QLLAYEV---YLASLEEADKPLRAPREVASAEMLEGFHTHLAQALEDIGFADPRQSDKLL 57 Query: 210 NKLRRLFTRARPESQELNILRGILASIE 237 +LR LF RARP+ E+NILRGIL++ + Sbjct: 58 RRLRALFHRARPDRDEINILRGILSAAQ 85 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 67/158 (42%), Gaps = 28/158 (17%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA--SDVIGNAHIV 63 +VLVE + GN+G++ R G + + LV P D A+ + GA S I Sbjct: 118 VVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIARTSWP 177 Query: 64 DTLDEA------LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 D L A L G S + R+ T P P+L LV G ER Sbjct: 178 DLLTWARQHRIALVGSSDRGASDYRATTYPRPLL-------------------LVLGSER 218 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 GLT+E+L C V I SLNLA+A ++ YE Sbjct: 219 HGLTDEQLAACDLVVRIPMRGRSDSLNLAVAAGILMYE 256 >UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcus RepID=A4S331_OSTLU Length = 344 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/125 (37%), Positives = 59/125 (47%), Gaps = 25/125 (20%) Query: 68 EALAGCSLVVGTSARSR-TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 EA+A SLVV T+AR R LP L C A A++FG ER GLTNEEL+ Sbjct: 79 EAVAEASLVVATTARPRENLPLLTLGA-ACEKMRDEIARGGKCAILFGNERTGLTNEELE 137 Query: 127 KCHYHVAI-----------AANPEYS------------SLNLAMAVQVIAYEVRMAWLAT 163 + V+I A +YS SLNL MAV V+AYE+ A Sbjct: 138 LAEFGVSIPTSATVGTSAMARRNKYSGGAGVDGSQTATSLNLGMAVGVVAYELFSQVHAV 197 Query: 164 QENGE 168 +E+ E Sbjct: 198 REDDE 202 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 23/171 (13%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGNA 60 ++ + L GN+G+V R +G + L+ P S A S + A Sbjct: 143 DVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYRA 202 Query: 61 HIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 D L+ LVVGT + RT+P+ AN PV L+ G E Sbjct: 203 SEADFLNWRKGFSGLVVGTHLKGAVDYRTIPY----------------ANKPVILIMGNE 246 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 + GL + C I SLNLA+A V+ YE+R L E G Sbjct: 247 QQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297 >UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9R5_9CHLO Length = 447 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60 L ++ +VLV T GN+G++ARA +L LV P P ++A ++ A GA ++ A Sbjct: 138 LSDVAVVLVGTKKAGNVGAIARACGAFECEDLRLVAPRADPYTRASLSAAKGAQHIVHGA 197 Query: 61 HIVDTLDEALAGCSLVV 77 + D +++AL GC + Sbjct: 198 GVYDDVEDALRGCDAAI 214 >UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria RepID=C3RH76_9MOLU Length = 246 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 17/148 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 +VLV GNMG++ R M TNL ++ P V D + I + GA I N ++ Sbjct: 96 VVLVNPGDMGNMGTIIRTMLGFNYTNLAIIRPGVDVFDPRVIRASMGALFNI-NFEYFNS 154 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123 DE L T R + ML G K++ + AAN +LVFG E GL ++ Sbjct: 155 FDEYL--------TKYPEREVYPLMLK----GAKNIHQITAANNKHSLVFGNESSGLPDD 202 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQV 151 L K V I + + SLNL+MA+ + Sbjct: 203 YL-KYGQSVFIPHSDKIDSLNLSMALGI 229 >UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4L1_9CHLO Length = 513 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 15/66 (22%) Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYS---------------SLNLAMAVQVIA 153 VA++FG ER GLTNEEL H VAI + S SLNL+ AV VIA Sbjct: 227 VAVLFGNERTGLTNEELGTAHAAVAIPTAGQGSLCRKSLKYTGGTGPTSLNLSQAVGVIA 286 Query: 154 YEVRMA 159 YE+ +A Sbjct: 287 YEMFLA 292 >UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF Length = 272 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 15/161 (9%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63 V VET GN G++ R +G + V P + A+ S V N +I Sbjct: 122 VPVETREPGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNID 181 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L + + ++ T+A E L E + P A +FG E GL E Sbjct: 182 DVLGQLRSQGLQILATAADG-----------EVDLDDAGELLSRPTAWLFGNEAHGLGEE 230 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164 L K + V I SLNLA A + YE A A + Sbjct: 231 LLAKADHRVRIPIRGRAESLNLATAASICLYESSKALFADE 271 >UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3 Length = 274 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 20/163 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VL GN+G++ R G+ +WL V P S + ++ S ++ + +L Sbjct: 123 LVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQLQSL 182 Query: 67 DEAL-----AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 L G L+ ++TL W + R P ++FG E GL+ Sbjct: 183 PPLLEKFHTQGLQLIATVPQATQTL-WEIDFQR-------------PTIVIFGSEGQGLS 228 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLAT 163 L+ + VAI P+ SLN+A+AV V+ YE R W A+ Sbjct: 229 APVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAAS 271 >UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ED00_9CHLO Length = 369 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNA 60 L+++ +V+V + GN+G++ARA + +L LV P V P S+ +++ A GA V+ A Sbjct: 80 LEDVCVVVVGSKKAGNIGAIARAAASFECEDLRLVAPRVDPTSRSSLSSAKGAQHVVHGA 139 Query: 61 HIVDTLDEALAGCSLVV 77 ++ EA+A C V Sbjct: 140 GEYLSVAEAIADCDAAV 156 >UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimonas micra ATCC 33270 RepID=A8SJQ1_9FIRM Length = 261 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 23/156 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 I L S GN G++ R G+ ++ +N + K +S+ + GA I +I+D Sbjct: 120 ICLENVSDPGNFGTIIRTANAFGINDILTINCVDKYNSKVLRATMGA---IFRTNIIDCK 176 Query: 67 DEAL-----AGCSLVVGT-SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 E + G L+ T S S+ L D + +V G E G+ Sbjct: 177 IEKIKELQSGGYRLISTTLSKNSKFLEEFTFDGKN--------------IVVMGNEANGI 222 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 + E L+ + H+ I + SLN+++A +I Y++ Sbjct: 223 SAEMLKISNNHLKIDMDNSMESLNVSIAAAIIMYKI 258 >UniRef50_Q1VZT2 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZT2_9FLAO Length = 171 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 28/163 (17%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLW--------LVNPLVKPDSQAIALAAGASDV 56 I ++L N+GSV R + G+ N+W L + +K S++ Sbjct: 23 INVLLERLDSPANLGSVFRNSEAFGIVNIWIHEANRSYLKSNRLKRTSRSAEFNLNIHFY 82 Query: 57 IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 A I+DT + G + + L + GLKS + LV G E Sbjct: 83 EDEASILDTFEGTTIGIEITKNSEN---------LSSFKKGLKS-------KILLVLGNE 126 Query: 117 RVGLTNEELQKCH--YHVAIAANPEYSSLNLAMAVQVIAYEVR 157 ++G+ +E L + YH+ + SSLN+A + + YE+R Sbjct: 127 KLGINSETLNRLDRSYHIKMFGTN--SSLNVAQTLGIALYEIR 167 >UniRef50_C6T8X9 Putative uncharacterized protein n=2 Tax=rosids RepID=C6T8X9_SOYBN Length = 324 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASD----VIGNAH 61 +VL GN+G++ R+ ++L+ P + +A+ + GAS V G+ + Sbjct: 171 LVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPVVSGSWN 230 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +++L + L P L P C ++TP+ LV G E GL+ Sbjct: 231 HLESLKKEFQMRFLAGHPEHEGLVKPVSSLSPSFCD-----SLSDTPLCLVLGSEGSGLS 285 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 + LQ C V+IA EY SLN+++A + Y Sbjct: 286 EKSLQTCEL-VSIAMTGEYESLNVSVAGGIFLY 317 >UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID=C5EXS0_9HELI Length = 228 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 22/147 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV--- 63 +VL S GN+GS+ R+ +G+ + + +K Q L A + ++G V Sbjct: 86 LVLCGISDVGNLGSIFRSAYALGVDGIVVCG--IKDFKQEGVLRASSGAMLGMPFCVVHN 143 Query: 64 --DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 D ++E + GTS + + L A + AL G E GL+ Sbjct: 144 PLDVINELKQSDFTLFGTSMQGKDLQ---------------NALSGKKALFLGSEGHGLS 188 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMA 148 N+ L K Y++ I E+ SLN+ +A Sbjct: 189 NKILAKMDYNLTIPMKREFDSLNVGVA 215 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 29/161 (18%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA------ 60 I+L + N+GS+ R +G + +V P +AI L A S A Sbjct: 131 IILDGITDAYNLGSILRTADAVG------AHGVVIPKRRAIGLNAAVSKASAGAIEYVPV 184 Query: 61 ----HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 +I T++ +VGT P E LK PVALV G E Sbjct: 185 ARVTNISQTIEYLKKKNIWIVGTDLSGEK---PFF---EADLKG-------PVALVIGSE 231 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 G+ +KC + V I + SSLN A+A +I YE+R Sbjct: 232 GEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIR 272 >UniRef50_B8DQP1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQP1_DESVM Length = 344 Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 13/153 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-------SDVIGN 59 + L + GN+G++AR + +G L +V A A AA + V Sbjct: 187 VALDQVQDPGNVGTLARTLYALGAAGLVVVRHGGAALGGAAARAAAGALEKLPVAKVTNL 246 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 A +D DEA G ++ A T P PR E TP LV G E G Sbjct: 247 ARALDEADEA--GYTIYAAGGAAPETDGKPGSGPR----NPFTEPLRTPAVLVLGNEDSG 300 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVI 152 + ++CH+ ++I ++ SLN+A A ++ Sbjct: 301 IRPNVAKRCHFTLSIPMARDFDSLNVAQAGAIL 333 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 29/164 (17%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIAL-------AAGASD 55 Q ++L E N+GS+ R +G + +V P +A+ L + GA + Sbjct: 96 QPFFLILDELEDPHNLGSIMRTADAVG------AHGIVIPKRRAVGLTTTVAKASTGAIE 149 Query: 56 VIGNAHIVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALV 112 I A + + TL+E VVGT A +R D R N P+ALV Sbjct: 150 HIPVARVTNLARTLEEMKERGIWVVGTDASARE------DFRNMD-------GNMPLALV 196 Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 G E G+ +KC + + + + +SLN ++A ++ YEV Sbjct: 197 IGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEV 240 >UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamicum RepID=Q8NQN8_CORGL Length = 198 Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 15/161 (9%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA---SDVIGNAHIV 63 V VET GN G++ R +G + V P ++A+ +AG+ V N +I Sbjct: 49 VPVETREPGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIA 108 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L + + ++ TSA E L E P A +FG E GL Sbjct: 109 DVLGQLRSKGLQILATSADG-----------EVDLDDADELLAKPTAWLFGNEAHGLDES 157 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164 L + + V I SLNLA A + YE A A + Sbjct: 158 LLAQADHRVRIPIRGRAESLNLATAASICLYESSKALFAGE 198 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 31/161 (19%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 ++L E + N+G++ R+ + G V+ ++ P +A+ + NA +V T Sbjct: 99 LILDEITDPHNLGAIIRSAEAFG------VHGIIIPKRRAVGV---------NATVVKTS 143 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-----------PVALVFGR 115 A+ + A+ + + D +E GL V N PVA V G Sbjct: 144 AGAVEHMRI-----AKVSNINNTIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGN 198 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E G++ LQ C + V I + +SLN ++A ++ Y+V Sbjct: 199 EGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQV 239 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 16/153 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI-VD 64 +VL GN+G++ R G L LVN P S + I GA + ++ Sbjct: 111 LVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWETDLE 170 Query: 65 TLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 T+ L G + + T+ R T+ D R+ LK A +V G E G+++E Sbjct: 171 TVRALLDGADIPLYATALREDTV-----DVRDVDLKRAA--------VVIGSEGRGISDE 217 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 L C + I SLN AMA V+ +E+ Sbjct: 218 ALALCRRTIKIPMRARCESLNAAMAAGVVLWEM 250 >UniRef50_A3XMS0 Putative tRNA/rRNA methyltransferase n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XMS0_9FLAO Length = 175 Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 14/145 (9%) Query: 16 GNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVI----GNAHIVDTLDEALA 71 N GS+ R +G+ +++ N ++ +S + A +S+ + +A ++ TL+ Sbjct: 33 ANAGSLFRLADALGIAHIYFCNTTIQFESTRLKRTARSSEKLVPYSPDADVITTLNGLKE 92 Query: 72 GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYH 131 ++G + + P L S+ E A +ALV G ER G+ + L + Sbjct: 93 KDYHLIGLELTTTSKP----------LASLNEYAFKKIALVLGHERYGICEDVLNILDHI 142 Query: 132 VAIAANPEYSSLNLAMAVQVIAYEV 156 I + SS+N++ A + AY++ Sbjct: 143 TYIPMRGKNSSMNVSQAAAIAAYQL 167 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 17/154 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASD---VIGNAHI 62 I+L E N+GS+ R ++G + + +Q +A A+ GA + V+ ++ Sbjct: 102 IILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNM 161 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V T++E + GT A+ + + +D + P+A+V G E G++ Sbjct: 162 VRTMEELQKRGLWIFGTDAKGSS-DYRTMD------------VDMPLAIVIGSEGFGMSC 208 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 +KC + V + + +SLN ++A ++ YEV Sbjct: 209 LVREKCDFLVHLPMRGKVTSLNASVAASLLLYEV 242 >UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C1B1 Length = 276 Score = 40.4 bits (93), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 34/162 (20%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 ++ VE + GN+G++ R +G + L V P +S+A+ +AG Sbjct: 131 VIPVECNDPGNVGTIVRMTDALGAGAVILAGDSVDPLNSKAVRSSAG------------- 177 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA------------ANTPVALVF 113 S+ AR R + + RE G ++A A + PVA +F Sbjct: 178 --------SVFHTPVARERDIDVVVERVREAGFTTLATAMDGALTLGVDALPDGPVAWLF 229 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 G E GL+ E VAI E SLNLA A + +E Sbjct: 230 GNEAHGLSEEITASAGASVAIPIKGEAESLNLATAAAMCLWE 271 >UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZL1_HERA2 Length = 266 Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 26/149 (17%) Query: 16 GNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSL 75 GN+G++ R +G L L+ P A A+ A + + T DE A Sbjct: 129 GNLGAIMRTCDAVGCEGLILIGDTTDPYHPA-AIRASMGSLFALRMVRTTFDEFAAWKQT 187 Query: 76 ----VVGTSA----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 V+GT+ +T+ +P +P L+ G ER+GL+ E Sbjct: 188 NGYHVIGTTPDVEQEYQTISYP-----------------SPAILLMGSERLGLSVGEQSV 230 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 C V I SLNL +A ++ YE+ Sbjct: 231 CDTLVRIPMAGTCDSLNLGVATSIVLYEM 259 >UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae RepID=B1ZWW3_OPITP Length = 250 Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 18/155 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLV-NPLV-KPDSQAIALAAGASDVIGNAHIVD 64 +VL + N+G++AR GL L L +P +P A +A G + A + D Sbjct: 100 LVLDRIGNAHNLGAIARTAAFFGLPRLILPRDPAAAQPSEAAYRVAEGGMTHLELARVDD 159 Query: 65 T---LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 L +A V+G + R GL P+ALV G E GL+ Sbjct: 160 LPAFLRSLVAAGYDVIGAATRG-------------GLPQAQSHTGKPIALVLGNEEHGLS 206 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E C V I + + SLN+++A V+ +E+ Sbjct: 207 AEVAAACTRLVTIPGSGKVESLNVSVAGAVLIWEL 241 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 379 e-104 UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 347 2e-94 UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 343 3e-93 UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil... 342 6e-93 UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ... 335 7e-91 UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ... 335 7e-91 UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter... 317 2e-85 UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ... 311 1e-83 UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ... 310 2e-83 UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G... 308 7e-83 UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ... 307 2e-82 UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ... 305 1e-81 UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ... 299 4e-80 UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella... 297 3e-79 UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro... 297 3e-79 UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03... 294 2e-78 UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick... 293 3e-78 UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro... 293 4e-78 UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ... 290 3e-77 UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith... 289 6e-77 UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac... 288 1e-76 UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ... 287 2e-76 UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami... 287 3e-76 UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ... 285 9e-76 UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI... 284 2e-75 UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ... 284 2e-75 UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ... 283 3e-75 UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ... 283 5e-75 UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ... 281 1e-74 UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30... 280 2e-74 UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34... 278 9e-74 UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ... 278 1e-73 UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM... 278 1e-73 UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte... 277 2e-73 UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ... 274 2e-72 UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a... 272 8e-72 UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ... 272 8e-72 UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ... 272 1e-71 UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ... 271 1e-71 UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ... 270 4e-71 UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ... 269 5e-71 UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp... 269 6e-71 UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68... 268 8e-71 UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur... 268 1e-70 UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ... 268 2e-70 UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ... 265 9e-70 UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur... 265 1e-69 UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma... 264 2e-69 UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ... 262 9e-69 UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo... 261 2e-68 UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re... 259 6e-68 UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ... 259 7e-68 UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25... 258 9e-68 UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera... 258 1e-67 UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or... 258 2e-67 UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ... 257 3e-67 UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ... 256 5e-67 UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales... 256 5e-67 UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ... 256 7e-67 UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re... 255 7e-67 UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N... 255 9e-67 UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ... 255 1e-66 UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo... 254 2e-66 UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s... 254 2e-66 UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ... 253 3e-66 UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod... 253 5e-66 UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11... 252 8e-66 UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ... 251 1e-65 UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ... 251 1e-65 UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria... 251 2e-65 UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq... 250 2e-65 UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ... 250 3e-65 UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ... 250 3e-65 UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ... 249 5e-65 UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad... 248 1e-64 UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group... 247 2e-64 UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph... 246 3e-64 UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur... 246 5e-64 UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ... 246 5e-64 UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 245 2e-63 UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne... 244 2e-63 UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein... 244 2e-63 UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc... 243 3e-63 UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L... 243 4e-63 UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 243 5e-63 UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ... 242 7e-63 UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma... 239 7e-62 UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula... 238 2e-61 UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne... 236 3e-61 UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob... 232 7e-60 UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ... 231 1e-59 UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 231 2e-59 UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ... 231 2e-59 UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ... 230 2e-59 UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or... 229 5e-59 UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc... 229 6e-59 UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 229 7e-59 UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc... 229 8e-59 UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14... 228 1e-58 UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7... 227 2e-58 UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ... 226 5e-58 UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ... 226 7e-58 UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha... 225 1e-57 UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ... 225 1e-57 UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ... 225 1e-57 UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho... 225 2e-57 UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ... 224 2e-57 UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc... 223 4e-57 UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar... 222 9e-57 UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep... 221 2e-56 UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra... 221 2e-56 UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo... 220 4e-56 UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe... 219 9e-56 UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido... 218 1e-55 UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402... 216 5e-55 UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte... 212 1e-53 UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat... 211 1e-53 UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 211 1e-53 UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido... 211 2e-53 UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto... 210 4e-53 UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ... 209 6e-53 UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=... 209 9e-53 UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI... 205 1e-51 UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM... 204 2e-51 UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto... 203 4e-51 UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 201 1e-50 UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT... 201 2e-50 UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo... 201 2e-50 UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12... 200 4e-50 UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ... 199 9e-50 UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 197 2e-49 UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10... 196 4e-49 UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor... 196 4e-49 UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ... 195 1e-48 UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS... 195 1e-48 UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi... 194 2e-48 UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT... 194 3e-48 UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot... 193 6e-48 UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus... 193 7e-48 UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta... 189 8e-47 UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ... 188 2e-46 UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon... 188 2e-46 UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc... 187 2e-46 UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter... 187 3e-46 UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD... 185 9e-46 UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ... 183 6e-45 UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam... 183 6e-45 UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 182 1e-44 UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ... 182 1e-44 UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 179 9e-44 UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 178 1e-43 UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 175 1e-42 UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ... 175 1e-42 UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano... 175 1e-42 UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 172 8e-42 UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell... 169 5e-41 UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarin... 165 1e-39 UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic... 165 1e-39 UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 157 2e-37 UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr... 156 5e-37 UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pe... 156 7e-37 UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H... 153 4e-36 UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ost... 146 5e-34 UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcu... 138 2e-31 UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 133 4e-30 UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudona... 124 3e-27 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 111 2e-23 UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria Rep... 109 9e-23 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 107 5e-22 UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8... 101 2e-20 UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCM... 96 1e-18 UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1... 88 3e-16 UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 86 1e-15 UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group... 86 1e-15 UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCM... 85 2e-15 Sequences not found previously or not previously below threshold: UniRef50_A4RVJ3 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 101 2e-20 UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamic... 95 2e-18 UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph... 94 4e-18 UniRef50_C9RBF8 RNA methyltransferase, TrmH family, group 2 n=9 ... 93 9e-18 UniRef50_Q1QBK2 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Prote... 93 1e-17 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 92 2e-17 UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu... 91 3e-17 UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 91 3e-17 UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces... 89 1e-16 UniRef50_C6XJZ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc... 86 1e-15 UniRef50_A3DBN9 RNA methyltransferase, TrmH family, group 2 n=9 ... 85 2e-15 UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hypho... 84 4e-15 UniRef50_D2RKI7 tRNA/rRNA methyltransferase (SpoU) n=10 Tax=Bact... 84 4e-15 UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot... 84 6e-15 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 83 6e-15 UniRef50_Q2Y7V6 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Betap... 83 7e-15 UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavo... 83 8e-15 UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_L... 82 1e-14 UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 T... 82 1e-14 UniRef50_B8CX36 RNA methyltransferase, TrmH family, group 2 n=20... 82 2e-14 UniRef50_C7N513 Predicted rRNA methylase SpoU family n=1 Tax=Sla... 82 2e-14 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 82 2e-14 UniRef50_A7BD02 Putative uncharacterized protein n=1 Tax=Actinom... 81 3e-14 UniRef50_C6X216 Putative rRNA methylase n=1 Tax=Flavobacteriacea... 81 3e-14 UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hypho... 81 3e-14 UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2... 80 6e-14 UniRef50_C7R3Q5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Jones... 80 7e-14 UniRef50_C7HXS5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thiom... 80 7e-14 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 80 7e-14 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 80 8e-14 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 80 8e-14 UniRef50_B2A6C6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 80 8e-14 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 80 8e-14 UniRef50_B3E096 tRNA (Cytosine34-2'-O-)-methyltransferase, SpoU ... 79 9e-14 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 79 1e-13 UniRef50_A8SKI8 Putative uncharacterized protein n=1 Tax=Parvimo... 79 1e-13 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 79 1e-13 UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neiss... 79 1e-13 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 79 1e-13 UniRef50_A9NFI2 RNA methyltransferase, TrmH family n=1 Tax=Achol... 79 1e-13 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 79 2e-13 UniRef50_C8W249 RNA methyltransferase, TrmH family, group 2 n=2 ... 79 2e-13 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 79 2e-13 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 78 2e-13 UniRef50_B0SDE0 rRNA methylase n=2 Tax=Leptospira biflexa serova... 78 2e-13 UniRef50_C4ZI93 RNA methyltransferase, TrmH family, group 2 n=7 ... 78 2e-13 UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus ... 78 2e-13 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 78 3e-13 UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Acti... 78 3e-13 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 77 3e-13 UniRef50_B0TZX6 rRNA methyltransferase n=3 Tax=Francisella RepID... 77 3e-13 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 77 4e-13 UniRef50_A4SYT6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Polyn... 77 4e-13 UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacte... 77 4e-13 UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevu... 77 4e-13 UniRef50_B2SHA4 rRNA methyltransferase n=17 Tax=Bacteria RepID=B... 77 5e-13 UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (c... 77 6e-13 UniRef50_Q0IAI9 Predicted rRNA methylase n=25 Tax=Cyanobacteria ... 77 7e-13 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 77 7e-13 UniRef50_A9M3B4 tRNA/rRNA methyltransferase n=58 Tax=Proteobacte... 76 7e-13 UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fuso... 76 7e-13 UniRef50_C2BWX1 TrmH family rRNA methyltransferase n=3 Tax=Mobil... 76 8e-13 UniRef50_C0YVQ1 Possible TrmH family rRNA methyltransferase n=1 ... 76 9e-13 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 76 9e-13 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 76 1e-12 UniRef50_Q2RHA9 RNA methyltransferase TrmH, group 2 n=2 Tax=Bact... 76 1e-12 UniRef50_C6P4R4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sider... 76 1e-12 UniRef50_C7RTK9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 76 1e-12 UniRef50_Q4DUL2 Putative uncharacterized protein n=2 Tax=Trypano... 76 1e-12 UniRef50_D1YDL1 RNA methyltransferase, TrmH family n=2 Tax=Propi... 76 1e-12 UniRef50_Q9SUL3 OBP33pep like protein n=16 Tax=Viridiplantae Rep... 76 1e-12 UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacte... 76 1e-12 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 76 1e-12 UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synec... 76 1e-12 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 76 1e-12 >UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189 Tax=Proteobacteria RepID=TRMJ_ECOL5 Length = 246 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 245/246 (99%), Positives = 246/246 (100%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA Sbjct: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL Sbjct: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 Query: 241 KGNKAE 246 KGNKAE Sbjct: 241 KGNKAE 246 >UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57 Tax=Gammaproteobacteria RepID=TRMJ_YERPA Length = 257 Score = 347 bits (890), Expect = 2e-94, Method: Composition-based stats. Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A Sbjct: 1 MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S EA + PVALVFGRERVGL Sbjct: 61 TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV-EHEETPYPL 179 TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L Q+ V E EE PYPL Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 VDDLERFY HLEQ L +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240 Query: 240 NK 241 +K Sbjct: 241 DK 242 >UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70 Tax=Gammaproteobacteria RepID=TRMJ_PHOLL Length = 241 Score = 343 bits (880), Expect = 3e-93, Method: Composition-based stats. Identities = 178/241 (73%), Positives = 210/241 (87%), Gaps = 1/241 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A Sbjct: 1 MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A + VA+VFGRERVGL Sbjct: 61 TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYH+ I NPEY SLNLAMAVQ+++YE+RMA+LA Q+ EQ + +E YPL Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DD+ERFY HLE L +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+ Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239 Query: 241 K 241 K Sbjct: 240 K 240 >UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2 Tax=Alteromonadales RepID=Q3IFI1_PSEHT Length = 241 Score = 342 bits (878), Expect = 6e-93, Method: Composition-based stats. Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 2/238 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P + DS A ALAAGASDV+GNA Sbjct: 2 ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE GL Sbjct: 62 VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L Q + E ++T YP Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 E FYGHLE+TL TGFI + HPG VM KLRR+F RARPE E+NILRGIL SI + Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINK 237 >UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Gammaproteobacteria RepID=Q080P3_SHEFN Length = 240 Score = 335 bits (860), Expect = 7e-91, Method: Composition-based stats. Identities = 158/240 (65%), Positives = 186/240 (77%), Gaps = 4/240 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L P +PD Q+IALAAGASD++ N Sbjct: 1 MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK E+ N PVA+VFGRE GL Sbjct: 61 TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA E + YPL Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTD----EYPLT 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LERF+ HLE TL TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++ Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKKM 236 >UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 Tax=Gammaproteobacteria RepID=B3PDK4_CELJU Length = 286 Score = 335 bits (860), Expect = 7e-91, Method: Composition-based stats. Identities = 137/239 (57%), Positives = 165/239 (69%), Gaps = 1/239 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 NIRIVLV TSH GN+G ARAMK MGL L+LV P P +A+ AAGA+DV+ NA Sbjct: 9 FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG AEA VA+VFGRE GLT Sbjct: 69 VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE-HEETPYPLV 180 NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L E H + P Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 LE +Y HLEQ L+ GF+ ++P Q M +LRRL+ R R + ELNILRG+L +++ Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQNY 247 >UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria RepID=Q5ZUP6_LEGPH Length = 257 Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats. Identities = 123/245 (50%), Positives = 166/245 (67%), Gaps = 3/245 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP PD +A +AAGA DV+ A Sbjct: 3 LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + +TLDEAL GC L++GTSAR R L P L P C ++ NT VA+VFGRE GLT Sbjct: 63 VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM L+ QV D Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 ++E+FY HL++ + F++ ++P ++M ++RRLF R E E++ILRG+L+ +++ + Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239 Query: 242 GNKAE 246 + + Sbjct: 240 WARKD 244 >UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7P7_9GAMM Length = 253 Score = 311 bits (797), Expect = 1e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++ A Sbjct: 15 MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D+LDEAL GC SAR R LP P+++PR+ + NT +A+VFGRE GL+ Sbjct: 75 VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++ + G E E D Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQREAI--TND 192 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 DL Y H E++L GF+ +P +M +++RLF RA + EL+I+ GIL + E + K Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252 >UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Gammaproteobacteria RepID=A6VX19_MARMS Length = 260 Score = 310 bits (795), Expect = 2e-83, Method: Composition-based stats. Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 4/241 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P P +A + AAGA D++ NA Sbjct: 1 MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IV TL+EA+A CSLV+GTSAR RT P+++ REC + EA + VA+VFGRE GL Sbjct: 61 TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N+E+ +CH V I AN EY LN++ AVQ++ YE+ MA +N E + E YP Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEIWMA----NQNKENYKKETPEYPHK 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D++ FY HLE+TL FI +HPG+V++KL R F R+RPE QEL ILRG+LA+++++ Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQREA 236 Query: 241 K 241 Sbjct: 237 G 237 >UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT Length = 249 Score = 308 bits (791), Expect = 7e-83, Method: Composition-based stats. Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 3/242 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L ++IVLV T+H GN+G+ ARAMK MG L LV P P A + A D++ A Sbjct: 11 LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I +TL++A+A C LV+GTSAR R +PWP+L+P+E V VALVFGRE GL Sbjct: 71 EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL C++HV I +P+YSSLNLA AVQ++ YE+R+A L+ E+ + + Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKN---YWDVELANT 187 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E H+++ + F ++P +++ ++RR F R+ + E NI RG+ A+I+++ Sbjct: 188 QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQKKL 247 Query: 241 KG 242 K Sbjct: 248 KQ 249 >UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCC9_KANKD Length = 277 Score = 307 bits (787), Expect = 2e-82, Method: Composition-based stats. Identities = 117/259 (45%), Positives = 160/259 (61%), Gaps = 18/259 (6%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P P +A+ ++GA DV+ NA Sbjct: 15 LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VDT++EALA C L++GTS+R+R LPWP+++PRE G PVA++FGRE GL Sbjct: 75 QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEARPVAIMFGRESTGL 134 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV---------- 170 NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A E + Sbjct: 135 LNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAELGY 194 Query: 171 --------EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222 + E ++++ Y HLE T+ T F P + ++RR+ +AR Sbjct: 195 DAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKARLN 254 Query: 223 SQELNILRGILASIEQQNK 241 E+NILRG L+SI++ K Sbjct: 255 KGEVNILRGFLSSIDKYIK 273 >UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae RepID=C9R390_AGGAD Length = 241 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P D QAIALAAGA DV+ +A Sbjct: 1 MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++ +A+A CSLV+GTSAR R L +++PRECG K+VA A N VA+VFGRERVGL Sbjct: 61 VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYP 178 TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L + + + YP Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +++LE F+ H EQ + GFI+ VM +LRRL+ RA E ELNIL G+L+++E+ Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQG---VMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237 Query: 239 QNK 241 + K Sbjct: 238 KLK 240 >UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VS87_ALCBS Length = 261 Score = 299 bits (767), Expect = 4e-80, Method: Composition-based stats. Identities = 116/260 (44%), Positives = 172/260 (66%), Gaps = 15/260 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P P +A A A+GA DV+ A Sbjct: 1 MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP----VALVFGRE 116 + +++DEAL G +LV+GTSAR R +PWP L PR+ + + AN P +A++FGRE Sbjct: 61 QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE--- 173 GLTN+EL++C+ HV++ ANPEY LN+A AVQ+I+YE+R+A L ++ Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180 Query: 174 --------ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225 + P + + F HLE+ + +GF+ PGQVM ++RRLF RARP+ E Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240 Query: 226 LNILRGILASIEQQNKGNKA 245 ++ILRG+L ++E++ + ++ Sbjct: 241 MSILRGVLVALEKKMQRDEG 260 >UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2 Length = 249 Score = 297 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 154/244 (63%), Gaps = 3/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NIRIVLVE SH+GN+GS ARAM MGLTNLWLVNP D +AIAL+ A++V+ NA Sbjct: 4 LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERV 118 IV L EAL VVGTSAR R + P+ + + + ++ +A++FGRER Sbjct: 64 RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-Y 177 GL NEEL + H I +N Y+SLNLA AVQ++AYE+ + + E E+ Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V +L+ Y H E ++L +GF+ ++ PG VM+K+RRLF R+ ESQE+NILRG L S++ Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243 Query: 238 QQNK 241 + K Sbjct: 244 NKGK 247 >UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria RepID=Q2YB91_NITMU Length = 267 Score = 297 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 115/244 (47%), Positives = 149/244 (61%), Gaps = 4/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +RIVL TSH GN+G ARAMKTMGL +L+LVNP PD +A A GA D++ A Sbjct: 24 LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + DTLDEAL+G L +AR R L + D R+ K + A VALVFG E GL Sbjct: 84 KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----HEETP 176 T E+ KC + I ANPEYSSLNLA AVQV+AYE+RMA E H Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D++E Y HLEQ +++GF+ P ++M ++RRLF RAR E +E+NILRGIL++ Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263 Query: 237 EQQN 240 E++ Sbjct: 264 EKRM 267 >UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24 Tax=Gammaproteobacteria RepID=Y380_HAEIN Length = 241 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 130/246 (52%), Positives = 173/246 (70%), Gaps = 6/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P D Q+ AL+AGA +++ NA Sbjct: 1 MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPK-SVDEQSYALSAGAENIVKNA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD+ DEA+ CSLV+GTSAR R L +++PREC K V A +A+VFGRER+GL Sbjct: 60 RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVV--AYKGKIAIVFGRERIGL 117 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L + E YP Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D L F+ + E+ + GFI+ VM KL+RL+ RA+ E ELNIL G+L+++E++ Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQG---VMRKLKRLYYRAKLEKNELNILNGMLSAVEKRI 234 Query: 241 KGNKAE 246 K + Sbjct: 235 DLTKED 240 >UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli RepID=A8PK88_9COXI Length = 239 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 5/238 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIVLV+T+ GN+G+ ARAMKTMGL L+LV P P A A+ A D++ +A Sbjct: 3 LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VD L+EAL C LV GTS R R W L PR K + +A++FG+ER GLT Sbjct: 63 VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEKIMNHC-QQKIAILFGQERCGLT 121 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L + ++ P V Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFLQE----KNIKKRTVPLADVK 177 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + FYG L++ L F++ N VM+KLRR+F+RA +S E+ IL+GI +++E++ Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235 >UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVJ6_CHRSD Length = 246 Score = 293 bits (750), Expect = 4e-78, Method: Composition-based stats. Identities = 119/246 (48%), Positives = 163/246 (66%), Gaps = 3/246 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLV+T H GN+G ARAMKTMGL++L LVNP PD++A LAAGA+DVI NA Sbjct: 1 MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119 +V+ + +A+ C VVG SAR R+LP P DP + + A + PVALVFGRER G Sbjct: 61 RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LTN+E++ C + V+I ANPEY LNLA AVQ++AYEVR AW Q + + + P Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPATSQTPPS-LPT 179 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D + F HL + L+ +GF+ + H + + LR LF RA+P +EL+ILRG+L+++E+ Sbjct: 180 RDQMAHFEAHLHEALVTSGFLTQPH-ARTEDHLRALFARAQPSRKELSILRGVLSTLEKA 238 Query: 240 NKGNKA 245 ++ Sbjct: 239 GSNPRS 244 >UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5 Length = 256 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 151/241 (62%), Gaps = 1/241 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P PD +A ALA+GA D++ +A Sbjct: 6 LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + LD AL GC V GTSAR R + WP + RE + +A+ AL+FGRER GLT Sbjct: 66 VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180 N E+ +C V I EY SLNL AVQV+AYE+ MA L Q + + + Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAALTAQPAQDVPAEDVPEQPAPI 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +D+E FYGHL+ L +GF++E ++M +LRRLF RARP E+NILRGIL IE+ Sbjct: 186 EDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIERWA 245 Query: 241 K 241 Sbjct: 246 S 246 >UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVG4_9GAMM Length = 263 Score = 289 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 115/246 (46%), Positives = 149/246 (60%), Gaps = 3/246 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + ++RIVLVETSH GN+GS ARAMK MGL L LV P PD+QA ALA+GA D++ A Sbjct: 17 LAPDLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERA 76 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + D L ALA C V GT+AR R + WP L R + VA A+ PVA++FG ERVGL Sbjct: 77 EVYDDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGL 136 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N EL C + I Y SLNLA AVQ++AYE+ +A T+ V P Sbjct: 137 SNRELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRAA- 195 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +E FYGHL Q L GF++ +M +LRRLF RARP+ E+ ILRGIL +E+ Sbjct: 196 --MEGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWA 253 Query: 241 KGNKAE 246 + +K + Sbjct: 254 QMDKGD 259 >UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum RepID=Q7NRY2_CHRVO Length = 244 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +QNIR+VL +H GN+GS ARAMKTMGL+ L+LV P V P +A ALA+GA D++ NA Sbjct: 1 MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 +V +L EAL+ ++ ++R R L P+ PR+ + +A A + VALVFG E GL Sbjct: 61 VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + EE+++C+ V I NP+Y SLNLAMAVQV+ YE+ E E Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYELFSHTGVDVE----YLRAEGEAATQ 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +++ GHLEQ + G+ + + ++M ++R +F RA +E++ILRG +++ Sbjct: 177 SEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQRTA 236 Query: 241 KGNKAE 246 G + Sbjct: 237 SGRSGD 242 >UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXZ7_HALHL Length = 249 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 4/236 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L+ RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P P D +A+A AAGA DV+ A Sbjct: 3 LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L AL GC L G SARSR P L+ R +VA+ + +A VFGRER GL Sbjct: 63 RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL CHY V I +P+YSSLN+A +VQ++A+E+RMA A G E P V Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMAAAA---GGPVQGQAEEPPAAV 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D LERF+ HLE+ G++ ++P M +LR +F RA E+ +LRG+++ + Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHV 235 >UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14 Tax=Acinetobacter RepID=B7H3X7_ACIB3 Length = 279 Score = 287 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 106/253 (41%), Positives = 147/253 (58%), Gaps = 11/253 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIV+V T+ N+GS RAMKTMGL+ L LV+P P ALAAGA D++ Sbjct: 13 LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 IV+TL+EA+ C LV GTSARSRT+PWP+LD R +++ AA +A+VFGRE GL Sbjct: 73 IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE--------- 171 TNEEL +YH+ I N +Y LN+A A+QV+ YE+RM+ L +E Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192 Query: 172 -HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230 + P +E FY HLE+ L F+ +P + +LRRLF R + + E ++LR Sbjct: 193 MQWDEPLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYHLLR 252 Query: 231 GILASIEQQNKGN 243 GI + ++ G Sbjct: 253 GIFSRVQALTSGK 265 >UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1W4_9NEIS Length = 254 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 102/250 (40%), Positives = 150/250 (60%), Gaps = 8/250 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+NIR+VL SH GN+GS ARAMKTMGL+ L+LV P P +A LA+GA D++ +A Sbjct: 9 FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 +V+TL EAL+ ++ ++R R L P+ PR+ + VA A + VALVFG E G Sbjct: 69 VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ +E+++C+ V I NPEY SLNLAMAVQV+ YE+ + E Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYELFSHTGVDVD----YLRAEAESAT 184 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ- 238 D++E F GHL+QTL G+ + ++M +LR LF RA +E++ILRG L +++ Sbjct: 185 RDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQRV 244 Query: 239 --QNKGNKAE 246 ++ G + + Sbjct: 245 AHRDDGRRQQ 254 >UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO Length = 282 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 113/254 (44%), Positives = 153/254 (60%), Gaps = 13/254 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L ++RIV+V T+ N+GS RAMKTMGL+ L LV P P ALAAGA+D+I Sbjct: 13 LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--VALVFGRERVG 119 IV+TL +A+ C LV GTSARSRT+PWP+LD R KS++ N VA+VFGRE G Sbjct: 73 IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE-------- 171 LTNEEL +YHV I N +Y LN+A A+QVI YE+RMA LA E+G+ Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192 Query: 172 ---HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228 + P + +E+FY H+E+ L F+ +P + +LRRLF R + + E ++ Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252 Query: 229 LRGILASIEQQNKG 242 LRGI + ++ N G Sbjct: 253 LRGIFSRVQALNNG 266 >UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 Tax=Desulfuromonadales RepID=A1ALQ6_PELPD Length = 251 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 7/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + ++ IV+VE GN+G V RAMK MGL+ L LV + +++ A A D++ A Sbjct: 8 IADSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERA 67 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERVG 119 + D L ALA C+L VGT+ R +L P + A + ALVFGRE G Sbjct: 68 ELYDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQGDCRGALVFGREDSG 127 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LT +EL C +H I + EY SLNL+ AV + YE+ A + ++ Sbjct: 128 LTTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKASDSPGGGRTEI------PAT 181 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 ++E + ++ +L GF+ E +PG +M LRR+ R+ +++EL ILRG+ + ++ Sbjct: 182 SAEMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWA 241 Query: 240 NKG 242 G Sbjct: 242 CSG 244 >UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Desulfuromonadales RepID=Q3A4B2_PELCD Length = 244 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 5/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60 +I +VLVE N+GSV RAM G ++L LVNP+ A +A AS ++ A Sbjct: 3 FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L ALA C+L GT+ R L P + + + VA VFGRE GL Sbjct: 63 RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 EL C V I + S+NLA +V + YE +A G+ + T + Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSR--VAAIACGKTAGRKST--SSI 178 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE Y H+ TL GF+ +P ++ RR+F RA +E+ ILRG+ + ++ N Sbjct: 179 ATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWLN 238 Query: 241 KGNKAE 246 + E Sbjct: 239 GQRREE 244 >UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus RepID=Q2JI62_SYNJB Length = 276 Score = 283 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 88/248 (35%), Positives = 124/248 (50%), Gaps = 7/248 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L +R+VLV+ + N+G++AR MK MG LV+P P D +AI A +D++ A Sbjct: 12 LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118 V TL EAL GC V GT+ RS+T P W + PR+ +A VFG E Sbjct: 72 RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAAL---VFGPEDR 128 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NEEL CH + I + Y SLNLA AV + YE+ + + Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELY-TLVCQSPSPAPPMPSPQRLA 187 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + LE F+ HLE LL G++ + + M K R LF RA E+ +LRGIL ++ Sbjct: 188 PFELLEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQLQW 247 Query: 239 QNKGNKAE 246 ++ E Sbjct: 248 SQGCSRQE 255 >UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Gammaproteobacteria RepID=Q31I12_THICR Length = 268 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 112/246 (45%), Positives = 154/246 (62%), Gaps = 8/246 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L I+IV+VETSH GN+G+VARAMK MGL+ L LVNP P A A A+GA+DV+ +A Sbjct: 11 LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA----EAANTPVALVFGRER 117 +V+TL++A+A C LVVG SAR R + WP LD R+ ++ E + VA++FGRE Sbjct: 71 VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETP 176 GL+N EL KCHY I NP YSSLN+A AVQV YE+ MA + + E H+ Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMATDIKSVHEAEGYRHK--- 187 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D +E FY HL Q L F+ + M ++RRLF R++ + +E++ILRG+L + Sbjct: 188 LASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAA 247 Query: 237 EQQNKG 242 ++Q K Sbjct: 248 QRQTKQ 253 >UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria RepID=B2SXQ6_BURPP Length = 353 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 103/256 (40%), Positives = 150/256 (58%), Gaps = 13/256 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58 + R VLVE SH GN+G+ ARA+KTMG + L LV+P V + D +AIA+A+GA DV+ Sbjct: 95 FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLA 154 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +AH+V TL +AL+G + +AR R P PR + +A + +ALVFG ER Sbjct: 155 SAHVVPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERT 214 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-- 176 GL+NE++++C I ANP YSSLNLA AVQV+AYE+R +L+ + Sbjct: 215 GLSNEDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAA 274 Query: 177 --------YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228 D++E + HLE L+A F+ +P ++M++LRRLF R+ E +E+NI Sbjct: 275 GEGEAVGARAASDEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLEREEVNI 334 Query: 229 LRGILASIEQQNKGNK 244 +RGI I ++K Sbjct: 335 VRGIAKHILLKSKSKD 350 >UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34 Tax=Burkholderiaceae RepID=Q3JQS9_BURP1 Length = 346 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58 + R VLVE SH GN+G+ ARA+KTMG + L LV P V + D +A+A+A+GA DV+ Sbjct: 62 FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLA 121 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +AH+V TL +AL G + +ARSR P L PR ++ + +ALVFG ER Sbjct: 122 SAHVVPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERT 181 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NE +++C I ANP YSSLNLA AVQV+AYE+R+A L E+ + Sbjct: 182 GLSNEHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLA 241 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D++ER + HLE L+A F+ +P ++M +LRRLF R E +E+NI+RGI I Sbjct: 242 QSDEIERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299 >UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRV8_9GAMM Length = 239 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 104/237 (43%), Positives = 143/237 (60%), Gaps = 1/237 (0%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 R+V+V T + N+G+VARAMK MGL +L LV P P A AAGA DV+ N + D+ Sbjct: 2 RVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALADS 61 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124 ++EA+A C VV TSAR R WPM + R+ ++ + VA++ G ER GL ++ Sbjct: 62 VEEAIADCHWVVATSARRRGYEWPMSNARQSMSEAYRRSQEGQQVAILLGPERSGLDSDS 121 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L+ C H I+ANP+Y LN+A A QV+ YE+ A A E E + YP + +E Sbjct: 122 LRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPKHEAVE 181 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 FY HLE L GF+R HPG + KLRRL T+A+ E ELN+LRGIL++IE+ + Sbjct: 182 HFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIERLER 238 >UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKR3_DESAH Length = 247 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 113/244 (46%), Gaps = 5/244 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 Q I +VLVE N+GSV RAM G + L LVNP + A +A A ++ A Sbjct: 4 QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VDTL +AL C L GT+ R L P + G E ALV GRE GL Sbjct: 64 VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EL+ C V I Y S+NL+ A ++ Y+ MA T + TP Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +L Y H+ ++L F+ +P ++ RR+F RA + +E+ I+RG++ I+ Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRIDWTES 239 Query: 242 GNKA 245 K Sbjct: 240 ERKK 243 >UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBE0_LARHH Length = 268 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 5/242 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+N+R+VL S N+GS ARAMKTMGLT L+LVNP PD +A LA+GA DV+ A Sbjct: 19 FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 + +L EAL G +L ++R R + P+ PR + + A VALVFG E G Sbjct: 79 VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ EE +C+ V IA NP+Y SLNLA AVQV++YE+ ++ +T Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYELFSQLDFPLDHL----RFQTERAS 194 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++E YGHL+ TL GF + ++M +LR LF RA E QE++ILRGIL +E++ Sbjct: 195 RDEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254 Query: 240 NK 241 Sbjct: 255 TG 256 >UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB Length = 256 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 4/236 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 +VL E N+G VARAM GL +L L+NP P +A + ++ A VI A + D+ Sbjct: 16 VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 ++EA+A LV T+ARSR +P P++ P E +SVA+ P +FGRER GL N+E Sbjct: 76 VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + V + +P Y+SLN+A AV V AYE R A ++E P + ++ Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEP-ATQESIQ 194 Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 R + HLE L A GF R + +LR +F +A E+ I+RG+++ E+ Sbjct: 195 RMFDHLESGLDARGFFRPVEKKPVTIRRLRNIFQKADLTDNEVRIMRGVISCFEKY 250 >UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY86_SYNAS Length = 263 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 7/236 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60 L++I +VL + GN+GS AR K MG+ L +V+ + ++ A+DV+ + Sbjct: 18 LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L EAL+G + +VGT+AR P++ PRE + + + + VAL+FG E GL Sbjct: 78 VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN++L+ CH V+I + + SLNL+ AV ++ YE+ +A E G V Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVA-----ETGIPVRFTPKM-ASS 191 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 +LE YGH+ L GF+ +P M +RRLF+R R +++E+ I+RGI + Sbjct: 192 RELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGICRQL 247 >UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI29_9SYNE Length = 304 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 43/287 (14%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L IRIVLV + N+GSVAR MK GL+ L+LV+P ++A+ +A A DV+ A Sbjct: 15 LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRER 117 IV T+ +ALAGC + T+AR+R P+ P + P+ AL+FG E Sbjct: 75 QIVPTIPKALAGCEYAIATTARTRGFNVPLDPPETALPNLLTSNPQQPIRQTALLFGPED 134 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV------- 170 GL+N+EL + I + YS+LNLA AV + YE+ N Sbjct: 135 RGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIESS 194 Query: 171 --------------------------------EHEETPYPLVDDLERFYGHLEQTLLATG 198 EHE+ P ++++ER+Y HLE LL G Sbjct: 195 LENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQVG 254 Query: 199 FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245 ++ + M K+R+L RA P S E+ +LRG++ IE +K Sbjct: 255 YLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIEWALSHSKQ 301 >UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMU6_9PROT Length = 265 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 153/243 (62%), Gaps = 1/243 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L+ IRIVL TSH GN+G+ ARAMKTMG++ L LVNP PD +A+A AAGA D++G A Sbjct: 14 LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + TLD ALA V SAR R L P L R+ + VA A VAL+FG E GL+ Sbjct: 74 VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180 N E+Q+C V I A+P Y+SLNLA AVQ++ YE+R+A A +P + Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFAGSPPVVTRTMPFASPPAVH 193 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D+ERFY HLE+ ++A+ F+ P +++ KLRRLF R ES E+NILRG+L ++E++ Sbjct: 194 QDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVERKL 253 Query: 241 KGN 243 G Sbjct: 254 AGP 256 >UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVT8_DESBD Length = 248 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 4/240 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGN 59 ML+NI ++L + N+GSVARA MG + LV P +A+ LA A ++ N Sbjct: 1 MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERV 118 I TL EALA S GT+AR+ + P E + + ++ A VA+VFG E Sbjct: 61 IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLTNEE C+ + I +SLNL+ AV V+ YE LA + + + Y Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++ E + L +TL+ F+ +++P M L+R F R P E N+L G+ + + Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGLCRQMRR 238 >UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria RepID=A8ZWU6_DESOH Length = 260 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 8/243 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNAHIV 63 I I+LV N+G+ RAMK MGL+ L +V P + + A A DV+ IV Sbjct: 14 ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 A++ S + GT+AR +L P K+V PVA++FG E GL NE Sbjct: 74 GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +LQ CH V I + E+SSLNLA AV VI YE+ A Q +H + +L Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 E Y +++ LLA F+R ++P MN RR +R ++E+ ++RG+ + + Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQVNWYGEKR 246 Query: 244 KAE 246 A+ Sbjct: 247 YAD 249 >UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH Length = 260 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 +N+RIVLV TSH GN+GSVARAMKTMGL L LV P PD QA A A+ A DV+ A Sbjct: 12 ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 D LD ALAGC LV+G SAR R + +LD RE G + VAEA + PVAL+FGRER GL Sbjct: 72 RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL +C V I ANPEY SLNLA AVQV+ +EV MA G V Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMA------RGAGVVAPTRRSASA 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 D+E F+ HL + GF+R+++P +M +LR+LF RA P+ EL +LRG+LA++E Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242 >UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples RepID=A4GJJ4_9BACT Length = 243 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 6/235 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE SH GN+G+ ARA+K MG L LVNP K +A A A D++ N I Sbjct: 8 DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D A+ +L++ TSAR RT+PWP +D +KS + T +VFGRE GL+ Sbjct: 68 KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R + +V + Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVREVVSNL---- 183 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + E+ HL + L F QV ++ RL + R + E+ ILRG L+ I Sbjct: 184 ENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238 >UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55896_SYNY3 Length = 240 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 125/240 (52%), Gaps = 8/240 (3%) Query: 11 ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEA 69 E N+G++ARAMK MGL L LVNP S +A +A A DV+ A +VD L A Sbjct: 2 EPQGERNVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATA 61 Query: 70 LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCH 129 L ++ TSAR R L PM PR+ + A N ALVFGRE GLTNEEL + H Sbjct: 62 LGDRQRIIATSARERILQSPMETPRQALPWLL--APNLKSALVFGREDSGLTNEELNQAH 119 Query: 130 YHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYPLVDDLE 184 V I +P+Y SLNL+ AV V YE+ A LA + N + P L+ Sbjct: 120 RFVRIPVHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLD 179 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 + HLE+TLL + + M K RR++ RA S+E+ +LRGIL I+ + K Sbjct: 180 SYCQHLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQIDWLAQQIK 239 >UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales RepID=Q473D9_RALEJ Length = 314 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 9/253 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57 M +R VLVETSH GN+GSVARA+KTMG +L LV+P V+ A+A+A+GA DV+ Sbjct: 45 MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLK---SVAEAANTPVALVFG 114 A IVD+++ AL G + V +AR R P L PR+ + S+A A +A VFG Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE- 173 ER GL N+ +++C I ANP Y+SLNLA AVQ+IAYE+R+A L + Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224 Query: 174 --ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + +E +GHL+Q L A GF+ +P ++M +LRRL RA E +E+NILRG Sbjct: 225 GYAGEPATAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILRG 284 Query: 232 ILASIEQQNKGNK 244 I + +G + Sbjct: 285 IAKHMLIAVRGGR 297 >UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5A5_9PROT Length = 253 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 119/244 (48%), Positives = 155/244 (63%), Gaps = 5/244 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L NIR+VL T+H GN+G+ ARAMK MGL+ L+L+NP PD QA A+AAGA DV+ NA Sbjct: 7 LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + ++DEAL G L VG +AR R + + PRE + V +A VAL+FG E GLT Sbjct: 67 VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEE + V I ANPE+SSLNLA AVQVI+YE+ +A +N + VE P Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVA----AQNYQPVEQSLQPAA-HQ 181 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +E F HLE+TL GF +P ++M +LRRL+ RARPE+ E+NILRGIL+ + N Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241 Query: 242 GNKA 245 KA Sbjct: 242 RLKA 245 >UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria RepID=Q6SFH7_9BACT Length = 248 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 2/241 (0%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +IVL TSH GN+GS ARA+KTMG T+L LVNP P ++A ALAAGA D++ NA I Sbjct: 9 DQFKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V T+++AL L++G +AR R L + RE K +E+ + +AL+FG E GL+N Sbjct: 69 VSTIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSN 128 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +E++ CH I +N +YSSLNLA A+Q+I YE+RM +++N ++ + Sbjct: 129 DEVKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQL--SEDNAIIQSSKKNELVTHEV 186 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 FY HLEQ L GF+++ ++M +LR LF R E E+NILRGIL I+++ K Sbjct: 187 QNGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQKKIKD 246 Query: 243 N 243 Sbjct: 247 K 247 >UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium MedeBAC49C08 RepID=Q4PK37_9BACT Length = 239 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 5/238 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + QN+ VLVETSH GN+G+ ARAM +MG+ NL LVNP P +++ A V+ A Sbjct: 3 IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVG 119 +I D L+EA+ +LV+GTSARSR++PWPM++ G A V++VFG E VG Sbjct: 63 NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLGKIINESLARKEKVSIVFGNEAVG 122 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NE+L KC +H+ I + + SSLNL+ AVQ++A+E+ ++ + E Sbjct: 123 LDNEDLGKCDFHLQIPTSED-SSLNLSHAVQIVAHEIYKGSSSSDLF---TQAREVELAS 178 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 E+ H+E L F +P QV +LRRL R + + E+ ILRGIL+++E Sbjct: 179 SQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236 >UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria RepID=A5CWV4_VESOH Length = 247 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 8/239 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +R+V+V T+ GN+G+ ARAMK M L+ L+LVNP P + A A A+GA DV+ +A Sbjct: 9 FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERVG 119 + ++L+EAL G LV+G SAR R + W +D K + VA++FG E+ G Sbjct: 69 VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LTN+EL C + I NP+Y SLN+A A+QV AY+ + T+ + + Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQNYIYNTPTE-----FKENVSKLAS 183 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237 D+LE FY HL Q L + ++ H +M +LR FT+ P+ +E++I RGIL +I+ Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242 >UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH12_DESAA Length = 251 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 116/243 (47%), Gaps = 9/243 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60 + I IVL E N+G ARAM MGL L +V P + +A AGA +I + Sbjct: 7 FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD L AL + VVGT+AR + M K ++ VALVFGRE GL Sbjct: 67 EVVDDLKTALKEFNWVVGTTARLGSHRKAM-TVENMAAKLISMTGENRVALVFGREDRGL 125 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + E+++ CH V I +SSLNLA AV ++ YE+ A ++ Sbjct: 126 STEDVRLCHQLVNIRTAG-FSSLNLAQAVLLVCYELFKA------GSDKPRESTPKLANK 178 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DLE Y L + L+ FI +P M+ +RR FTR ++++ I+RGI ++ Sbjct: 179 FDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVDWYT 238 Query: 241 KGN 243 + Sbjct: 239 ERR 241 >UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae RepID=B0T711_CAUSK Length = 266 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 111/239 (46%), Gaps = 5/239 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++L N+G+VAR M GL +L LV P P +A A+GA+ + NA + D Sbjct: 9 CVILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNAKVFD 68 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123 TL+EA+A LV T+AR R P++ PRE + E V L+FG ER GL + Sbjct: 69 TLEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAGLETD 128 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ C ++I + + SLNLA AV + AYE +M + E P L Sbjct: 129 DIALCQAIISIPIDERFRSLNLAQAVSINAYEWKMTV--DDRPWVKFEQNVEPPADQSSL 186 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNK 241 Y LE+ L GF M LR RAR QE+ RG++ ++ + Sbjct: 187 LGLYAQLEEQLEEAGFYHPPEKKPSMVRNLRAPLARARLTEQEVRTFRGVVTALSRGRG 245 >UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU Length = 231 Score = 259 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 127/246 (51%), Gaps = 20/246 (8%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M +++I+LVE + GN+GSVARAMK G ++L LVNP + +A A A+ A D++ +A Sbjct: 1 MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNP-CELKMEARAFASHAYDILESA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 V+T++EAL G LV+ T+ + + P PR+ LK + +A++FGR Sbjct: 60 KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 E G TNEEL+ V+I + Y +NL+ AV +I YE+ Q+ E Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYEMS-----------QILAGEN 166 Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 DL + H+++ L + + + +R+F RA+ +E+ LRG + Sbjct: 167 SLADGFDLRLLFEHIDEVLDDIDY-PAHKKEKTHLMFKRIFGRAQLMPREVQTLRGFIGK 225 Query: 236 IEQQNK 241 +++ K Sbjct: 226 VQKHIK 231 >UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJE3_MEIRU Length = 257 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 17/255 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ---------AIALAAG 52 L+NIRIVLV + N+G+ ARAM+ G+++LWLV P + A LA Sbjct: 4 LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63 Query: 53 ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLP-WPMLDPRECGLKSVAEAANTPVAL 111 A DV+ +VDTL EA+A LVVGT+ R R + P++ PR L+ A VA+ Sbjct: 64 AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123 Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171 VFGRE GLT +E+ V I +P SLNLA AV ++ YE+ A Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEIFGVAQAPPPP----- 178 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 E L++ + L++ +L GF E + + RRL +AR E+ +LRG Sbjct: 179 -EPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLLRG 237 Query: 232 ILASIEQQNK-GNKA 245 L + G + Sbjct: 238 FLHQSRWYAQHGRRK 252 >UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria RepID=B8HLP3_CYAP4 Length = 262 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 126/238 (52%), Gaps = 7/238 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L +RIVLVE + N+G+++R +K MGL L LVNPL P ++A +A A D++ A Sbjct: 12 LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 V TL +AL GC ++ T+ R + PR + P AL+FGRE GL Sbjct: 72 RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWLL----GHPAALIFGREDRGL 127 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL + I +P Y SLNLA AV V +YE+ A+Q E + Sbjct: 128 TNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEPIAPGGGELARF 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++LE +Y LE LL G++ + M K RRLF R++P E+ +LRGIL+ +E Sbjct: 186 ENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALLRGILSQVEW 243 >UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae RepID=B8H062_CAUCN Length = 263 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 111/239 (46%), Gaps = 5/239 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++L E N+GSVAR M GL++L LV P P +A A A+GA + +A + D Sbjct: 12 CVILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFD 71 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123 TL+ A+A LV T+AR R P+ PRE E A V L+FG ER GL + Sbjct: 72 TLEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETD 131 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ C V+I + + SLNLA AV + AYE +M + E L Sbjct: 132 DIALCQAIVSIPIDERFRSLNLAQAVSINAYEWKMTQ--DDRPWRKFEQNVEEPADQAAL 189 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNK 241 YGHLE L GF M LR RAR QE+ RG++ ++ + Sbjct: 190 LGLYGHLEDELEKAGFYHPPEKKPSMVRNLRAPLARARLSDQEVRTFRGVITALSKGRG 248 >UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms RepID=D0B958_BRUME Length = 291 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 4/235 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LV N+G VARAM GL L LVNP P +A A A+ A VI NA + D Sbjct: 31 AIILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYD 90 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123 L A+A + V T+AR R P+ E G ++FGRER GL+NE Sbjct: 91 DLPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEKTGILFGRERFGLSNE 150 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ + NP ++SLN+A AV +++YE + L Q + E P ++L Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237 F+ HLE+ L G+ R ++M N LR + TRA S EL +LRG++ S++ Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264 >UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC Length = 271 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 93/247 (37%), Positives = 130/247 (52%), Gaps = 10/247 (4%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 I+IVL TSHTGN+G+VARAMK MGL L LV+P D QA+A A A+D++ A Sbjct: 18 DRIQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQ 77 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 VD L +ALA V T+AR R L P++ R+ A + +++VFG ER GLTN Sbjct: 78 VDNLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTN 137 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +E+ + I ANP+Y LNL AVQ++AYE RMA T + Q + T Sbjct: 138 QEISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMAH-GTARSAPQPNIDSTELATTAQ 196 Query: 183 LERFYGHLEQTLLATGFIRE---------NHPGQVMNKLRRLFTRARPESQELNILRGIL 233 F L + L T F + ++M +LR L RA P EL +++GI+ Sbjct: 197 WAAFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIV 256 Query: 234 ASIEQQN 240 ++ + Sbjct: 257 RALTEST 263 >UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium HF10_12C08 RepID=A4GJN4_9BACT Length = 245 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 5/242 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60 I I+LV+T N+G VAR+M G TNL LV+P P +A+A+A A +++ N Sbjct: 3 FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +L EAL+ S +G +AR R + D + + + N + +VFG E GL Sbjct: 63 KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN+ L V I + +SSLNL+ AV V Y + T++ V+ P+ Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTEQ---LVDKNSEPHGSQ 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 +DL F+ HLE+ L + GF + ++ LR +F RA +E+ LRG++ + + Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQNLRNIFHRADLSEREIATLRGVVRVLSEY 239 Query: 240 NK 241 K Sbjct: 240 RK 241 >UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5 Length = 277 Score = 256 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 4/236 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LVE N+G VARAM GL+ L LVNP P +A A A+ A VI + + Sbjct: 16 AIILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFE 75 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 TL+EA+ + V T+AR R P+ P + A ++FGRER GLTNE Sbjct: 76 TLEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEKTGILFGRERWGLTNE 135 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ V NP ++SLN+A AV +++YE + + + E + + Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYEWMKSGMDD-LGETLFQPIEQRPSTKEQV 194 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQ 238 + H+E+ L A G+ M + LR + +R QE+++ RG++ S+++ Sbjct: 195 FGLFEHIEEALDARGYFHPAEKKPKMVDNLRAVLSRRGFSEQEISVFRGVIRSLDR 250 >UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHT7_SYNFM Length = 257 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 8/246 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNA 60 L+NI IVL E + N+G+ AR+ K MG+ L +VNPL + + +A A DV+ Sbjct: 5 LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I D L ALA VVGT+AR + + +PR+ + V+ + A++FG E GL Sbjct: 65 EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNE+L+ C + V I +++S+NLA AV ++AYE+ A N E+ + Sbjct: 125 TNEQLRFCDFLVTIPTA-DFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LE Y L TL FI +++P M +RR F+R + E+ I+RGI I+ Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQIDWYC 237 Query: 241 KGNKAE 246 + Sbjct: 238 DRKDED 243 >UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD Length = 255 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 89/252 (35%), Positives = 141/252 (55%), Gaps = 14/252 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD----SQAIALAAGASDVI 57 ++ ++V+ SH GN+GS ARA+KTMG +L LV P PD +A+ALA+GA+DV+ Sbjct: 5 FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPR-YPDMTSQPEAVALASGATDVL 63 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFG 114 A + TL+EALA +L +AR R L P D R+ + +A + A+V G Sbjct: 64 ERARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLG 123 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL----ATQENGEQV 170 ER GLTN ++ C I ANPEYSSLN+A A+Q+ A+E+R A L AT Sbjct: 124 TERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALLRANGATLLPASTA 183 Query: 171 EHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228 + + + ++ F H ++ L+ F+ HP ++M ++R LF+R+ E+++ Sbjct: 184 QQPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEIDM 243 Query: 229 LRGILASIEQQN 240 LRG+ ++ ++ Sbjct: 244 LRGVCTAMLRKK 255 >UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH Length = 384 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 119/245 (48%), Gaps = 8/245 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 Q IVLV N+G+ ARAM+ GLT L LV P P+ A AAGA DV+ A Sbjct: 137 QKPAIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQ 196 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + T EA+A C+ + T+ R R + P++ P E ++A A++FG ER GL Sbjct: 197 VFATTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQA--GKSAVLFGPERSGLE 254 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 E++ + + +PE+ SLNLA AV + AYE W E + + + P Sbjct: 255 TEDVALARAILTVPIDPEFGSLNLAQAVILCAYE----WSKGAELEQPTQEDLLPPAPQA 310 Query: 182 DLERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +L+ HLE L G+ N LR + T+ E+ LRG+L+S+++ + Sbjct: 311 ELDDLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGD 370 Query: 241 KGNKA 245 K K Sbjct: 371 KVPKG 375 >UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas intermedia K12 RepID=C7HY98_THIIN Length = 260 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 7/242 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58 L + VLV TSH GN+G+ ARA+K MG NL LV P + +A A+GA DV+ Sbjct: 18 LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPETLAFASGAEDVLK 77 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRER 117 A + L +A+A C +VV SAR R P+ P + A VA VFG ER Sbjct: 78 TAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRRVAFVFGSER 137 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL+N ++ +C ++I ANP Y+SLNLA AVQVIA+E R + + E+ Sbjct: 138 FGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQAESVA 194 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 +++ H+EQ LLA + N P +++ +L+RL +RA E+ ILRG+ ++ Sbjct: 195 ATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVCTAVL 254 Query: 238 QQ 239 ++ Sbjct: 255 RK 256 >UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae RepID=Q1GGZ7_SILST Length = 249 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 6/243 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 VLV N+G ARAM GL + +V P P+ +A+A+A+GA ++ A + Sbjct: 10 FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 L EALA C+ V T+AR R L P+ P K+ VA++FG ER GL N++ Sbjct: 70 LPEALADCTYVFATTARPRELTKPVFSPEGAMKKAAELMVQGEKVAVLFGPERAGLENDD 129 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + K + + + NPE++SLNLA V + AYE R Q E E ++ + ++E Sbjct: 130 IAKANAIITVPVNPEFASLNLAQCVLLTAYEWRRQQ--EQVAHETFEIGKSEWATNQEVE 187 Query: 185 RFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 H E+ L G F + R L++R + ++ +L G++ + + K Sbjct: 188 ALVNHYEERLTEAGYFFPPEKAPGMKTVFRNLWSRMQLTRADVQMLHGVMRQMVRW-KQR 246 Query: 244 KAE 246 + + Sbjct: 247 EED 249 >UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQ32_9BURK Length = 269 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 10/247 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58 L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P K +AI+LA+GASDV+ Sbjct: 7 LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRER 117 A I +TL EALA S+ SAR R L + P+E +++ + A VFG ER Sbjct: 67 QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------TQENGEQVE 171 GL+N+EL C+ V IAANP YSSLNL+ AVQ++AY +R W A Q + Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + V + H + + A F+ + P +V+ +L R+ + E +E+++LRG Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246 Query: 232 ILASIEQ 238 + + + Sbjct: 247 FFSDVIR 253 >UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae RepID=B7A9R4_THEAQ Length = 244 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 95/249 (38%), Positives = 126/249 (50%), Gaps = 14/249 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS----QAIALAAGASDVI 57 L +R+VLVE N+G+VARAM+ GL L+LVNP + +A LA A +++ Sbjct: 5 LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRE 116 A VD+L EALA LVV T+ R R L P++ E + + + VALVFGRE Sbjct: 65 DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPAWEVPARVL--SVEGEVALVFGRE 122 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GLTNEEL H I PE SLNLA AV V AYE+ A + E Sbjct: 123 TFGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPRE-------E 175 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 V LE F+ L + +L GF +N M +LRR+F +AR E+ +LRG+L Sbjct: 176 LAQVAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQS 235 Query: 237 EQQNKGNKA 245 Q + Sbjct: 236 RYQMRKKDG 244 >UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales RepID=Q28PL2_JANSC Length = 258 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 5/244 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 VLV N+G+ ARAM GL + +V+P P+ +A+ALA+GA ++ NA + Sbjct: 16 AFVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQ 75 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 L AL+ C+ V T+AR R L P++ P ++ A A V ++FG ER GL N Sbjct: 76 DLPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENA 135 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ +++ NP + SLNLA V + AYE + E + +T + ++ Sbjct: 136 DIAPADAIISVDVNPAFPSLNLAQCVLLCAYEWQRQGSTVAP--EVMALAKTDFASNLEV 193 Query: 184 ERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 E+ H E+ L GF + LR L+ R ++ L G++ + + +G Sbjct: 194 EKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVRWAEG 253 Query: 243 NKAE 246 + + Sbjct: 254 RRKD 257 >UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio RepID=B8DKE7_DESVM Length = 266 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54 ML N+ +VLV+T N+G VARA MG ++ LV+P ++A+ LA Sbjct: 1 MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60 Query: 55 DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVF 113 D++ +V TL EA+A C++V GT+AR+ +L P ++ A VA+VF Sbjct: 61 DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 G E GLTN+E++ CH + I PE SSLNLA AV V+ YE Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYECLKG--TATHPFRPGPAP 178 Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 ++ +LE + L TLLA ++R ++P M +RR R R E +++ G+ Sbjct: 179 DSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEFDLVMGVC 238 Query: 234 ASIEQQ 239 +++ Sbjct: 239 RQVKRM 244 >UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales RepID=B1Y5A0_LEPCP Length = 252 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 8/230 (3%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAHI 62 R +L+ TSH GN+G+ ARAMK MG +L LV P + +A+A+GA+D++ A I Sbjct: 9 RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V TLDEAL G + T+ R P PRE A VA VFG ER G++N Sbjct: 69 VATLDEALEGIHVACATAMTPRDFGPPTSTPREHLP--ALAAGGERVAFVFGSERYGMSN 126 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE+ +C ++I P+Y SLNLA AVQ++AYE RMA + + +D+ Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMALGGYDVSARTPAVQ---RASLDE 183 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 ++ H + TL+A GF+ P ++M +L++L RA +E++ILRGI Sbjct: 184 VQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233 >UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGR7_THEYD Length = 252 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 8/238 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ VLVE +GN+G+ ARA+K MG TNL L+NP V +A +A + DV+ A I Sbjct: 10 ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINP-VPLQDEAYWMAWASKDVLEKAQI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 LDE+L +L++GT+ R ++D ++ + A N VA++FGRE GL N Sbjct: 69 FRELDESLKDKALIIGTTRRRGAKRGAIIDVKDGVKRVYEVAQNNKVAILFGREDKGLFN 128 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE++KC Y + I + SLNLA AV ++AYE+ E + Y + Sbjct: 129 EEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYELMRC-----EELKDFHMNRQFYVSQTE 183 Query: 183 LERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 L++ Y L + L +I + +++N R F R EL +L G+ IE+ Sbjct: 184 LDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEE 241 >UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae RepID=A1KUH1_NEIMF Length = 292 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 25/260 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------------KPD------ 43 L NIRI+L TSH N+GS ARAMKTMGL L +V P + P+ Sbjct: 33 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92 Query: 44 --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 93 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVSELL 152 Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 A VALVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 153 QTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 212 Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220 + + +Q +H + ++ H+E + GF + ++M +++ LF RA Sbjct: 213 GSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 268 Query: 221 PESQELNILRGILASIEQQN 240 ++++++ILRG ++ + Sbjct: 269 TQTEDIDILRGFFNTVSHRI 288 >UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53114 Length = 251 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 5/241 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G+VARAM GL L LV P P+ A A+A+GA +V+ +A + + Sbjct: 13 VILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLTSAEVFEQ 72 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECG-LKSVAEAANTPVALVFGRERVGLTNEE 124 ++A+ + + T+AR R L ++ P E L + + +FG ER GL N++ Sbjct: 73 TEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSERSGLINDD 132 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + Y + + NPE+SSLNLA AV ++ YE A L + + + + + E Sbjct: 133 IAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWG--NSELSTIGERE 190 Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 FY LE+ L GF+ + LR +F++A +QE+ L GI+ ++ + Sbjct: 191 YFYKRLEKHLDEAGFLYPLELAPTICRNLRAMFSKATLTNQEIRTLHGIVTALSNYTPDS 250 Query: 244 K 244 K Sbjct: 251 K 251 >UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales RepID=A7IP45_XANP2 Length = 298 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 113/242 (46%), Gaps = 5/242 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+GS ARAM GL+ L +VNP P A +AGA ++ A + Sbjct: 19 VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124 L AL G + +AR R + P+L ++ + A VALVFGRER GL EE Sbjct: 79 LRSALVGVNYAFAATARERGMAKPVLGADAVAQEARSRLAGGEDVALVFGRERTGLYTEE 138 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + C + + NP ++SLNLAM V V YE A + +P DL Sbjct: 139 VSLCDAILTLPVNPAFASLNLAMCVAVTGYEWFKAETGGALPFAPPDR--SPLADKGDLL 196 Query: 185 RFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 F+ HLE L +GF R + LR +F R Q+L L G + ++E+ G Sbjct: 197 AFFDHLEGALEQSGFFRSPEKAPSTIRNLRNIFHRLGLTRQDLATLHGAVTALEEGRAGR 256 Query: 244 KA 245 A Sbjct: 257 DA 258 >UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum centenum SW RepID=B6ISG6_RHOCS Length = 266 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 5/240 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G+ ARAM GLT L LVNP P+ +A+A +AGA++V+ A + Sbjct: 25 VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNEE 124 EA+A V T+AR R + ++ PR A AA V ++FG ER GL N++ Sbjct: 85 TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + +++ NP +SSLNLA AV ++AYE M +E ++P ++L Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEWWMEAAQAEEF--YTHTGQSPPATKEELH 202 Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 + HLE L TGF + ++ +R RA QE+ GI+A++ + K Sbjct: 203 NLFDHLEGELDQTGFYTHPDKKPSMVRNVRNTLQRAHMTEQEVRTFHGIIAALVGRKKQR 262 >UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W0D7_NEICI Length = 330 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 25/260 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------------KPD------ 43 L NIRI+L TSH N+GS ARAMKTMGL L +V P + P+ Sbjct: 71 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130 Query: 44 --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVPELL 190 Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 A V LVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 191 QAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 250 Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220 + + +Q +H + ++ H+E + GF + ++M +++ LF RA Sbjct: 251 DSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 306 Query: 221 PESQELNILRGILASIEQQN 240 ++++++ILRG ++ + Sbjct: 307 TQTEDIDILRGFFNTVSHRI 326 >UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae RepID=Q2P2B7_XANOM Length = 254 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 141/240 (58%), Gaps = 4/240 (1%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IR VLV T H GN+G+ ARAMKTMG++ L LV P D A +AGA DV+ A I Sbjct: 7 IRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPIFA 66 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNE 123 TL EA+A C+LV+G +AR+R + L P E +++A+A+ VA VFGRER GLTN+ Sbjct: 67 TLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLTND 126 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLV 180 ELQ CH V I ++P++SSLNLA AVQV+AYEVR+A LA E Sbjct: 127 ELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPASH 186 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE +G L TL F + P M KLRRL RA QE+ ++RGIL+ ++ Sbjct: 187 AQLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQRMA 246 >UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4014 Length = 269 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 12/254 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59 +L R+VLV + GN+G+ AR M+ GL++L LV P D A +A V+ Sbjct: 4 LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63 Query: 60 AHIVDTLDEALAGCSLVVGTSA------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113 A +V L +AL+ C + TS+ RS T+ E + +A A PVA+VF Sbjct: 64 ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIG----TAAEQMPELLAAAEAGPVAVVF 119 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE-QVEH 172 G E GL+NEE+ +CH V + ++P SLNLA AV + YE R AW + + E Sbjct: 120 GPEPHGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEI 179 Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 E D +R + HL L G++ +M+ +R+L RA P QE+ IL G+ Sbjct: 180 PERAVAPFADQDRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHGL 239 Query: 233 LASIEQQNKGNKAE 246 + ++ K + Sbjct: 240 ARQLLWASRQMKRD 253 >UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria RepID=Q2RWJ5_RHORT Length = 279 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 118/238 (49%), Gaps = 5/238 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD 64 IVLV N+G VARAM GLT L LV P +AIA A+GA ++ A + Sbjct: 19 AIVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFE 78 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 T + A+A + V T+AR R + +L PR + + AA A++FG ER GL+N+ Sbjct: 79 TTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSND 138 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ V + NP Y SLNLA AV ++ YE A AT EQ+ +T +L Sbjct: 139 DVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQAGDAT--PAEQLVTNDTQPATRGEL 196 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQN 240 F+ HLE+ L GF+R M LR LF RA QE+ L G++ + Sbjct: 197 LGFFDHLERELDDCGFLRNAAKRPGMVRNLRNLFERADLTEQEIRTLHGVVKELRHGR 254 >UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota RepID=Q0W2E0_UNCMA Length = 249 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 20/239 (8%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+GSV RAMK G +L LV P +S A A+A+ A D++ +A IV Sbjct: 8 HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPCELGNS-AKAMASHAQDLLASAAIV 66 Query: 64 DTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 DT++EAL G S++VGT+ + + P PRE LK++ E VAL+FG+E Sbjct: 67 DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NE L+KC ++I + +Y +NL+ AV V+ YE+ ++ + Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-----------ADIKGNDFLLA 173 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 + E Y H+EQ L + + + +RR+ RA +E L G++ I+ Sbjct: 174 DSEMQEILYQHVEQLLDSINYADYKK-DKTSLMIRRIIGRAMISPREYFTLMGLIRDIQ 231 >UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ Length = 250 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 132/238 (55%), Gaps = 6/238 (2%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAH 61 +R VLVETSH GN+GS ARA+KTMG +L LVNP ++AIALA+GA DV+ A Sbjct: 9 LRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLETAT 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGL 120 + +L++A+ CSLV+G ++R R P LD L S A VA+VFG ER GL Sbjct: 69 VSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERTGL 128 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 NE L C + V + ANP+Y SLNLA A+ V AY +R + + Sbjct: 129 ENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVDFA 188 Query: 181 D--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D + H + L A G++ HP ++M + + LF R+R +E+++LRGI + Sbjct: 189 DPIAVAAMLEHWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRGIAKQM 246 >UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN85_9DELT Length = 252 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 4/242 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60 + NI ++L ++ N+GSVARA MG + L + +A LA + ++++ + Sbjct: 1 MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVG 119 L++AL G V TSAR + P + + + E + ALVFG E G Sbjct: 61 EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRPETLDQDTALVFGPEDKG 120 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L N E++ C ++I + SLNL+ AV ++ YE A + + ++P Sbjct: 121 LANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFKHVPAARTRH--IPSWDSPPVT 178 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + ++ + ++++TLL F++ ++P M L+R + E N+L GI I+ Sbjct: 179 QEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLMGICRQIKWM 238 Query: 240 NK 241 Sbjct: 239 AG 240 >UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7Y7_MAGSM Length = 258 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 3/232 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +L SH GN+G+ RA+ MG +L LV P P A AAG + I + D+L Sbjct: 15 FILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQVFDSL 74 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS--VAEAANTPVALVFGRERVGLTNEE 124 D A A + +V + R R ++ PRE G++ + A++ V ++FG ER GL + Sbjct: 75 DAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTGLETAD 134 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 +++CH+ I + E SLNL+ AV ++AYE+ + + + ++ D++ Sbjct: 135 VERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLGQGLGEVPVHDPQRDDA-LASQDEMV 193 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 RF+ HL+ L+ FI+ + Q+M L+ LF RA + +E+ ILRGIL + Sbjct: 194 RFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEV 245 >UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus RepID=Q1IWV0_DEIGD Length = 254 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62 N+ +VLV GN+G+ ARAM MG ++L +V P P DSQA+A+A A+D++ +A I Sbjct: 2 NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 TL EALA L VGT+AR R P P + A +A ALVFG E GL N Sbjct: 62 YPTLREALADRDLSVGTTARLRADLPPPRHPAQVRPLVRAASAP---ALVFGPEETGLVN 118 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +L++C V + EY+SLNLA AV ++ YE A T + +T ++ Sbjct: 119 SDLEQCQVTVRVPTA-EYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKT--ATREE 175 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 +E YGHL +T+ G+ + R + RA S E + RG L + + + Sbjct: 176 MEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQVRWKVED 235 >UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon RepID=D1JIN9_9ARCH Length = 234 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 20/242 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +RI+LVE N+G+VAR K G ++L++VNP + +A+++AA A DV+ + IVD Sbjct: 3 VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNPP-EIGIKALSVAAHAYDVLQSCKIVD 61 Query: 65 TLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 +L A+A ++V GT+A+ L P P E LK ++++FGRE VG Sbjct: 62 SLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGREDVG 119 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L N+EL+ C V+I +PEY +NL+ AV VI YE+ T E Sbjct: 120 LLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLE-----------LAP 168 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 V+D ER Y L+ L G+ RE+ + + LRR+ RA ++EL L+GI+ E + Sbjct: 169 VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAEWR 227 Query: 240 NK 241 Sbjct: 228 IG 229 >UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG74_LIBAP Length = 268 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 6/241 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 I+LV+ N+G VARAM LT L LVNP P +A + +A A VI + + Sbjct: 17 IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124 L EA+A + T+AR+R +L P+E + + V ++FGRER GLTNEE Sbjct: 77 LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEE 136 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + ++ NP + SLN++ AV ++ +E + + E + E+ +L Sbjct: 137 IALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSEKNVK---EQNTPATKGELL 193 Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 F +LE +L G+ R ++++ L +F R +E+ +LRGI++++++ ++ + Sbjct: 194 SFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQS 253 Query: 244 K 244 Sbjct: 254 S 254 >UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0D5_DESRD Length = 256 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 4/248 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59 +L N+ +VL + N+GS ARA +G NL LV P +A LA G +V+ + Sbjct: 7 LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERV 118 + L AL+ V GT+AR+ + P + + AA VA+VFG E Sbjct: 67 LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NEE+ C + I E +SLNL+ AV ++ YE A ++ + + ++ Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYEWFKA--SSGKRFLRTTPPQSRLC 184 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++ E +++ LL F ++++ M +RR F R E N+L GI ++ Sbjct: 185 THEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQVKW 244 Query: 239 QNKGNKAE 246 + Sbjct: 245 LATRTDTD 252 >UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales RepID=B7KUQ9_METC4 Length = 245 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 4/237 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G ARAM GL+ L LV P P A+GA+ V+ A + T Sbjct: 6 VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNEE 124 L EA+A ++ T+AR R + P + + V L+FGRERVGL+N+E Sbjct: 66 LPEAIADLHFLLATTARERGQMKRVFAPEDAMAATAERIGRGERVGLMFGRERVGLSNDE 125 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + V E+ SLNLA AV ++ YE R A A +P + + Sbjct: 126 VSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRA--AGLATLRFSGEMLSPPATREAML 183 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + LE+TL GF + +R + R Q++ RG L ++ ++ + Sbjct: 184 SLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKAR 240 >UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae RepID=A1VM17_POLNA Length = 311 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 131/259 (50%), Gaps = 22/259 (8%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNA 60 R +L+ TSH GN+G+ ARAMKTMG +L LV P V + I A+GA DV+ NA Sbjct: 38 KTRFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNA 97 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------------ECGLKSVAEA 104 IV+TLDEAL G + + T+ R P PR E G Sbjct: 98 RIVETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQ 157 Query: 105 ANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164 VA +FG ER G+ NE++ +CH ++I +P++ SLNL AVQ+IAY+ R A Sbjct: 158 RPDSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF- 216 Query: 165 ENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224 G Q EE + H E+ L+ GF+ P ++M +L +LF RA+ + Sbjct: 217 --GIQAAIEEPRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSPE 274 Query: 225 ELNILRGILASIEQQNKGN 243 E++ILRG+ ++ + Sbjct: 275 EIHILRGVAKAMMRHAPDK 293 >UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH2_9PROT Length = 293 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 6/242 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LV N+G+ ARAM GL L LV P P++ A A+AAGA++V+ + T Sbjct: 41 VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124 + EA+A C VV T+AR R + P+ P + + AA A++FG E+ GL EE Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + H V I NP + SLNLA AV V+AYE A A + + + E Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYEWAQAAGAAPLFTSPYQED---PATQAERE 217 Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 + + HL L G+ +H +V+ + LR L A EL +L G++ E+ Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERHLPEK 277 Query: 244 KA 245 Sbjct: 278 SQ 279 >UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus RepID=Q31MT7_SYNE7 Length = 245 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 10/238 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63 +RIVLVE + N+G++AR M GL++ +V P +A +A A+ ++ A +V Sbjct: 3 LRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVLV 62 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L AL GC V T+ + P+ P + + P AL+FGRE GL Sbjct: 63 DNLPSALEGCQWVAATTGQRDLRDLPLESPTQ----ILPWLRQGPAALIFGREDSGLQRS 118 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL ++ +P Y SLNLA AV + Y A L+ ++ + E +P + Sbjct: 119 ELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYH--YACLSEADSRGVPQQESSPAAVRAAF 176 Query: 184 ERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 E+ +G+ LE LL G++ + M K+R + R+ ++E+ +LRG++ + Sbjct: 177 EQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQLNW 234 >UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G643_NOVAD Length = 251 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 8/242 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 IVLV N+G ARAM GL + LV+P P+ A AAGA V+ A + T Sbjct: 13 IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L EA+A CS V T+ R R + P+L P + V +A+ A++FG ER GL +++ Sbjct: 73 LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIV--SASGRSAIIFGPERSGLETDDV 130 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 V + NPE+ SLNLA AV + AYE Q E + P ++ E Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDM----LPPAPQEEFEG 186 Query: 186 FYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 + L L G+ LR + T+ E+ +RG+L+++ ++ Sbjct: 187 MFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRRKPGSRP 246 Query: 245 AE 246 + Sbjct: 247 GD 248 >UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus RepID=B5IRU8_9EURY Length = 245 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 10/243 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + ++LVE + N+G VARAMK + L LVNP + +A A A DV+ NA IV Sbjct: 2 KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNPP-ELRGEAYKFAMHAKDVLENAKIV 60 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDP---RECGLKSVAEAANTPVALVFGRERVGL 120 T+DEAL + VGT+ S + P P E + A + + FGRE GL Sbjct: 61 KTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAKR--AFLYGGKIGIFFGRESKGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +NEEL+K + V I + EY +NL+ AV V+ YE+ + + + E+ H Sbjct: 119 SNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRH--LRKATR 176 Query: 181 DDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILA-SIEQ 238 ++ + + + L + LRR+ R+ ++E+ L G L +IE+ Sbjct: 177 EEKDILVKYWSELLETLNYPKDPIRRKYFTIMLRRVIGRSFIYAREIYSLYGPLRLAIEK 236 Query: 239 QNK 241 + Sbjct: 237 IKR 239 >UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIP4_RHOVA Length = 263 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 11/245 (4%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LVE N+G+ ARAM GL L LV P P+ A A AA A +++ A + Sbjct: 11 AIILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYP 70 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNE 123 L A+A +V T+ARSR L P+L P + +AA+ ++FG+ER GL N Sbjct: 71 DLATAVADLHYIVATTARSRFLAKPVLAPDTAVTEIAERQAADLRCGVLFGKERTGLENS 130 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175 ++ + +P ++SLNLA +V + AYE R L G + + Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190 Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILA 234 +L FY HLE L GF+ + M N +R +F R P QE+ LRG++A Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250 Query: 235 SIEQQ 239 + + Sbjct: 251 ILRRG 255 >UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG27_ARCPR Length = 234 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 23/247 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I + LV N+G VAR MK G L+L N V + + A+ A D++ NA ++ Sbjct: 2 ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYNCKV--TTVSFKTASHARDILRNAVVLR 59 Query: 65 TLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 D+ L +++VGT+ + R + P+ P E ++ E +A+ FGRE G Sbjct: 60 KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEEF--RNFLEGKKGEIAVAFGREDYG 117 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL+ CH V++ NPEY +N++ AV VI YE+ + E+ Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYELSKG---------KYGLEDKTIVT 168 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI----LAS 235 ++E+ + E+ +L T + R + + LRR+ R+ +EL +L GI L Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227 Query: 236 IEQQNKG 242 I+ KG Sbjct: 228 IQHLKKG 234 >UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R186_9DELT Length = 304 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 103/238 (43%), Gaps = 4/238 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDT 65 IVL N+GS AR MG+ +L +V + + A A+ +I T Sbjct: 19 IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 + EALA V+ TSAR PR ++ A VAL+FG E GLTNE+L Sbjct: 79 VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 CH I ++SSLNLA AV V+ YE+ A Q V V +LE Sbjct: 139 YLCHQLTTIPTA-DFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195 Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 YGH+EQ L GF+R M +R L R ++E ++RG + Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGFCRQFLWYDAQR 253 >UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A5GRX6_SYNR3 Length = 248 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 7/244 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59 M ++ +VLVE S N+GSVAR G+ +L LV P P D QA +A + + Sbjct: 1 MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERV 118 + +L++A+A C VV S R L P+ + + VALVFGRE Sbjct: 61 CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQPALQWLLEPKPGPNHVALVFGREDH 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQENGEQVEHEETPY 177 GL + EL + I + Y SLNL+ AV + E R+A + + P Sbjct: 121 GLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS----SPPL 176 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 P LE E+ LL GF+ + M KLR+L R+ P E+ +LRG++ + Sbjct: 177 PAHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMVRQLR 236 Query: 238 QQNK 241 ++ Sbjct: 237 WASR 240 >UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM7_HIRBI Length = 253 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 5/243 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LV N+G+ AR M GL +L ++NP P+ +A ++AGA + A + D Sbjct: 11 AIILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFD 70 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 TL+ LA + V+ T+AR R + P+ + E G+ ++ + V ++FG E+ GL NE+ Sbjct: 71 TLEAGLADLTYVLATTARPRGMEKPVFNAEE-GIGALMSRPDVGVGVMFGAEKAGLLNED 129 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + + +SSLNLA AV V A+ L + E ++ + L Sbjct: 130 VALADGILTYPVDRSFSSLNLAQAVGVFAHSWAARTLEGEAKKEFAGVGDS--ADREQLV 187 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKGN 243 R + H E L GF VM LR F RA+ +QE+ RG + ++ Sbjct: 188 RMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKALALGRGKA 247 Query: 244 KAE 246 + + Sbjct: 248 RID 250 >UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0P2_DESAC Length = 243 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VLVE GN+G+V RAM G+ L LV S A+ + GA ++G A L Sbjct: 8 VVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPDL 67 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 ALA V + R+ L +L E + + AA + VA VFGRE GLT +E+ Sbjct: 68 AAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEVA 127 Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERF 186 C I E SLNLA AV V YE+ ++V + P D E Sbjct: 128 LCSQAATIETTDETGSLNLAQAVVVTLYELSR-------RQDRVGIVQRDQPTHDQFEPL 180 Query: 187 YGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + L++ + G++ + P + LRRL +A P+ ELN LRG++ + + Sbjct: 181 FQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLINRLSE 232 >UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus RepID=Q46JZ1_PROMT Length = 245 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 4/241 (1%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63 ++++LVE + N+GSVAR + + L LV+P +A +A ++ A + Sbjct: 7 LKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAKVY 66 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L+ AL+ CS ++ T R P+ ++ + +ALVFGRE GL+NE Sbjct: 67 EDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSEREDTIALVFGREDRGLSNE 126 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL K + +++ + +Y SLNL+ AV ++ ++ L + ++ +P L+ L Sbjct: 127 ELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQ--LNDLDLLKRHTKISSPANLIK-L 183 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 E LL GF+ ++ M K+++L R + E+ ++RGI++ + K Sbjct: 184 EDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIISQARWKIKNK 243 Query: 244 K 244 Sbjct: 244 S 244 >UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12 Tax=Methanococcales RepID=Y1476_METJA Length = 230 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 10/237 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ I ++LV ++GN+GS+AR M G L +V +++A +A A +++ NA Sbjct: 1 MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTS-ARS--RTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 +T DEA+ V+ TS AR R L + P+E K + N + +VFGRE Sbjct: 61 KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEVKGN--IGIVFGRED 118 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL NEE+ KC V+I + +Y +NL+ AV VI YE+ T++ + Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEIY-----TKKVRNKFLDINMRE 173 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 +D E + + I E+ +RL RA +E L Sbjct: 174 ASKEDKELLIRKFNEFIDKNEKIPEHKKELCKIIFKRLVNRAFISGKEAWTLMSAFK 230 >UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A381_THESM Length = 246 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 10/248 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62 ++++LVE + N+G++AR MK G+T+L LVNP V P+++ A A A D++ NA I Sbjct: 2 KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERVG 119 ++L+EAL L +GTS + P + P E + + + LVFGRE G Sbjct: 62 HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRL--SIYDGEIGLVFGRESRG 119 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL+K + V I + EY +NL+ AV VI YEV L + ++ Sbjct: 120 LDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKS---T 176 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQ 238 + E + L + ++ + + +R R ++E++ L G L + Sbjct: 177 RQEREMLVEFWAKFLDTLEYPKDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRRAIK 236 Query: 239 QNKGNKAE 246 + K + Sbjct: 237 LLERCKND 244 >UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7Y1_FERPL Length = 230 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 26/246 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G L L N ++ AA A DV+ A V+ Sbjct: 2 IEVVLVELKIPENIGFIARVMKNFGFEKLVLYN--CNVSKESYITAAHAKDVLDKAVKVE 59 Query: 65 TLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 L E L +LVVGT+ R + P P E + E A++FGRE G Sbjct: 60 NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEE-----LREMIKGETAILFGREDYG 114 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L +EEL+ C+ V++ + EY +N++ A VI YE+ + E E+ Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSKG---------KFEFEKEEIAT 165 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS---- 235 D++R + E+ + + F E+ G++ L+R F RA E++ + GI+ Sbjct: 166 QKDVDRLVEYFEKLMKSIWF-PEHRIGRMKVVLKRAFGRAALTKYEVDAISGIIRKTLLY 224 Query: 236 IEQQNK 241 +E+ K Sbjct: 225 LEELKK 230 >UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Methanomicrobiales RepID=A7I6L8_METB6 Length = 261 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 29/247 (11%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + I IVLV + GN+G AR MK G T L LV+P +A A+ A DV+GNA Sbjct: 1 MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDP-CPLGEEAKGRASHAQDVLGNAE 59 Query: 62 IVDTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 I T+++ A S+VV T+ + + P PRE L+ A V+++FGRE Sbjct: 60 IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRE--LRERIGIAEGRVSILFGRE 116 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL N+E+++ I + EY +NL+ AV ++ YE+ + Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYEL-----------ANLPSAPYR 165 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHP----GQVMNKLRRLFTRARPESQELNILRGI 232 ++ Y H+++ L + +HP M +RR+ RA S+E + + G+ Sbjct: 166 LATPYEMGHLYRHIDRFLDSV-----HHPAFKRENTMIMIRRILGRACLTSREASTVHGL 220 Query: 233 LASIEQQ 239 L E Sbjct: 221 LRRTEWH 227 >UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria RepID=B8EQU7_METSB Length = 281 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 13/249 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK------PDSQAIALAAGASDVIGN 59 I+LV N+G ARAM GL++L LV+P A A AAGA ++ Sbjct: 18 AIILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEG 77 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118 A + DT +EA+A + V T+AR R P+L P E ++A A ++FG ER Sbjct: 78 AKLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERT 137 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+N+E+ + NP Y+SLNLA AV +I YE A +T+ V +P Sbjct: 138 GLSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYEWMRA--STEAKAPFVADPRSPPA 195 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASIE 237 + + F+ +LE L GF R VM + ++ +F R +Q+++ LRG +I Sbjct: 196 PREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRG---AIV 252 Query: 238 QQNKGNKAE 246 + +G +AE Sbjct: 253 RLVEGPRAE 261 >UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9A6_GEMAT Length = 283 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 6/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L + +VL E+ + N+G V RAMK MG+ +L L+ P ++ +A D++ Sbjct: 5 ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +T+DEALA C VVG S R + W PR + + A VA++FGRE GL Sbjct: 65 QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 NE L + + I + SLN+A A + YE+ M + H P Sbjct: 125 PNEALDRSNAICTIPTTEHF-SLNVAQACLLALYELHMLAGDATKRLPPPRHA-AGSPSK 182 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG----ILASI 236 DD+ER + + L A + + +M R L RA P+ +EL ++R +L +I Sbjct: 183 DDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTASIEVLRTI 242 Query: 237 EQQNKG 242 E++ + Sbjct: 243 ERETRQ 248 >UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY Length = 243 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 21/241 (8%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I IV VE TGN+G +AR M G NL LVNP + D A + A +I NA Sbjct: 8 FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNPP-ELDEDAYRFSKHARYIIENAE 66 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRER 117 I++ +E +V TS S P L PRE K + N + +VFGRE Sbjct: 67 ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWNFSGN--IGIVFGREN 124 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL NEE++KC + I + EY +N+ A +I YE+ M + EE Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFME-----------KREEEGM 173 Query: 178 PLVDDLER--FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 PL ++ E + L F + RR+ RA E + + G++ Sbjct: 174 PLAEEFESNLLNERFSELLGLINFPD-HKRKNTEVMFRRIIGRAMLTKWEYHSMMGVMKR 232 Query: 236 I 236 I Sbjct: 233 I 233 >UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae RepID=Q0AQY2_MARMM Length = 249 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 9/234 (3%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 +L N+G+ AR M GL L +V+P P+ +A+ ++AG S V+GNA + Sbjct: 9 AFILHTPQLGENIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEY 67 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 L +A+ + + T+AR R + P++ RE A A VA++FG E+ GL NE Sbjct: 68 RLGDAIHDTTRLYATTARPRGMEKPVMTAREAVSDMKAAIEAGEKVAVMFGGEKSGLPNE 127 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 + + + + +SSLNLA AV VIAYE A E + +DL Sbjct: 128 AVNMADVIITLPVDRSFSSLNLAQAVAVIAYEWTAGEGAPAEF-----EPVSDVAKREDL 182 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASI 236 ER + H E L GF +M LR F R R QE+ RG + ++ Sbjct: 183 ERMFEHFETELERAGFFHPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKAL 236 >UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5 Length = 233 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 12/235 (5%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 I+L+ N+G+ ARAMK GL L +V P P+ QA + A GA ++I +A I D+ Sbjct: 8 IILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKIFDS 67 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L++++ + T+ R + + + L + V ++FGRE GL+NEE+ Sbjct: 68 LEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLD---YPNSEKVGIMFGRENNGLSNEEI 124 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 + + I ++SSLN+A AV +I YE+ ++ H +++E Sbjct: 125 AFANKIITINTT-KFSSLNIAQAVIIICYELFRNSTPRED-----VHNIQKLATKEEIEH 178 Query: 186 FYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQ 238 F +L L GF + + + + +FTR S E+ L+GI+ S+ Q Sbjct: 179 FLVNLFGKLDKAGFFKAPDKKPAMQQNITNIFTRINSLSSPEVQTLQGIIKSLNQ 233 >UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus RepID=Q31AG9_PROM9 Length = 249 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 6/245 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60 N++++LVE + N+GSVAR + L +V+P S +A +A + + Sbjct: 7 FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119 I D L+ A+ C LV+ + R + + E + + +A++FGRE G Sbjct: 67 KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINNLAIIFGREDRG 126 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+N EL + I + SLNL+ AV ++ YE+ + E E Sbjct: 127 LSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNKSSKRNFNK----ELEVFNLAS 182 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + + +E+ LL G++ E+ ++K + +RA E+N+LRGI+ I Sbjct: 183 SKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQINWF 242 Query: 240 NKGNK 244 +K Sbjct: 243 LNNSK 247 >UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E490 Length = 236 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 14/234 (5%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M G+++L +V +++AI + ++ NA I + Sbjct: 8 ISVVLVEPKYQGNIGAVARSMANSGISDLRIV--KTPIETEAIYRSMHGRYILDNAKIFN 65 Query: 65 TLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +L EA++G ++ GTS S+ P E S VALVFGRE GL Sbjct: 66 SLKEAVSGFEIIAGTSDISKSGEKFRRVPTGPEEFW--STNGLTGQKVALVFGREDNGLN 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EEL C++ + I NPEY NL+ AV +I YE+ A + H+ +D Sbjct: 124 YEELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEMIKA---NYSGNATITHDLIGRDKID 180 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 L LE+ L + E +MN L R+ RA E + GI+ Sbjct: 181 TLAG---RLEELLAKIDY-NEQEIDTLMNMLNRIIARANITDSEFFKIMGIMRQ 230 >UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA Length = 234 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 25/248 (10%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+G VAR MK G+ L+LV P + AIA A A D++ NA IV Sbjct: 2 DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61 Query: 64 DTLDEALAGCSLVVGTS-------ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 +TL+EA+ + T+ AR+ +PW + + A + +A+VFG E Sbjct: 62 NTLEEAIEDVEAAIATTAVLASTPARNPMMPWEVRE---------AFSDYEKIAVVFGPE 112 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL E++ C + I + EY S+NL+ +V V+ YE++ E V Sbjct: 113 DRGLRTWEVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKM--------EYVPERYGR 164 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + E L+ + A F V RR RAR +E+ L I Sbjct: 165 AATKREKEVLVKSLDDLMKALNF-DSTRRENVCTTFRRFLARARCTDKEIKALLWIFEKA 223 Query: 237 EQQNKGNK 244 +++ G K Sbjct: 224 KRRVLGVK 231 >UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae RepID=Q1QMV4_NITHX Length = 410 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 5/241 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++LVE N+G ARAM LT L +VNP P+ A AAGA ++ + + D Sbjct: 17 TVILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFD 76 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 T++ A+A C+L++ T+AR+ P++ P ++ + AA V ++FGRER GL NE Sbjct: 77 TVEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNE 136 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ + NP ++SLNLA AV ++ YE L T+ E + + Sbjct: 137 EVAMADRIITYPVNPGFASLNLAQAVLLMGYEWFK--LVTRAALPFAMPERSERASQHQM 194 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKG 242 + F+ +L L F+R M LR +FTR P Q+++ L G++ +I + KG Sbjct: 195 QAFFDNLVSELDKVEFLRPAEKRDTMLVNLRNIFTRMEPTKQDMHTLHGVVMAIAEGRKG 254 Query: 243 N 243 Sbjct: 255 P 255 >UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus RepID=C5A3L4_THEGJ Length = 243 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 11/237 (4%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 +VLVE N+G VAR MK G + L LVNP + ++ + A A DV+ NA IV+T Sbjct: 13 SVVLVEPEGPANIGMVARTMKNFGFSRLVLVNPNL--SEESYSYAVHARDVLKNATIVET 70 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNEE 124 +EAL L VGT+ + P L+ + V L FGRE +GL NEE Sbjct: 71 FEEALELFDLTVGTTGKPGRRFISYRAPLYPWELRETLKGYTGEVGLFFGRESIGLKNEE 130 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L++ V I + +Y +NLA AV VI YE+ + E D+ E Sbjct: 131 LERLDLIVTIPTSEDYPVMNLAQAVAVILYELSKT-------RPEPSVEALKPATRDEKE 183 Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 + L + E + R+ +A +E++ L G L ++ Sbjct: 184 ALVRVWAELLKVLEYPKDEERREVFVKVFRKAVGKAFLYGREVHTLIGPLRRAVKRL 240 >UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter RepID=Q4FLI9_PELUB Length = 237 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 8/240 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60 NI +L + + N+G+ ARA+K L +V P + P+ + +A + GA D+I NA Sbjct: 3 FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +TL+ A+ VV TSAR R ++ + N +A +FG E GL Sbjct: 63 KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD----LKKIDFNKKIAFLFGSEASGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N E+ +Y + I NP++ SLNL+ +V +IA+ V A + + + + ++ Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQ 239 D++ + L F + +M LR +F++ +E IL + AS+ ++ Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLENLRSIFSKMELSEKETRILSSVFASLSKK 236 >UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F137_ACIC5 Length = 240 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 7/236 (2%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLV T + N+G+ ARAM G +L +V P +A + A GA+ ++ +A Sbjct: 10 IAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEARS-AVGAASILASARECS 68 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 TL +A+A C+ V+GTSA P + L +A+ +ALVFG+E+ GLTN + Sbjct: 69 TLADAVADCTCVLGTSAIGDRQPLQPIVDLPAALPWLAQRVAGRIALVFGQEKHGLTNHD 128 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L C + I PE +S+NL AV V YE + A E DLE Sbjct: 129 LSHCDAILRIPTLPEQASMNLGQAVAVCLYEFARSGHAPT------ATEAPKAAPAADLE 182 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 R L + L +G+I+ + + R L R ++ ++L G+LA IE++ Sbjct: 183 RLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERKL 238 >UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY Length = 235 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 12/242 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G + L L+NP + ++ A A A DV+ NA I+D Sbjct: 2 ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPNL--TEESYAYAVHARDVLENALILD 59 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNE 123 + ++AL VGT+ + P P L + + V + FGRE +GL NE Sbjct: 60 SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELVGLIKDYPGEVGIFFGRESIGLKNE 119 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL + I + EY +NLA A V+ YE+ + E ++ Sbjct: 120 ELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYELSK-------KRPEPYVEALKPATREEK 172 Query: 184 ERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILA-SIEQQNK 241 E E+ L + ++ + +R RA +E++ L G L ++++ + Sbjct: 173 EALVRTWEKLLNTLDYPKDAERRDVFVKVFQRAVGRAFLYGREVHTLIGPLRKALKRLEE 232 Query: 242 GN 243 Sbjct: 233 CR 234 >UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae RepID=A5UK71_METS3 Length = 301 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 NI IV VE GN+G +AR M GL NL L+NP +A A ++ NA I Sbjct: 68 NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPT-LTPEAFYQATHGKYIVDNAKI 126 Query: 63 VDTLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 TLDE V ++ + P N A++FGRE GL Sbjct: 127 YHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLGKNINTNNKTAILFGREGNGL 186 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEE++ C V+I +P Y LN++ A +I YE+ + E Sbjct: 187 TNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMH-------EYPVEGLEESTA 239 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 + E + + I E+ + + + RA +E + L+GIL ++ + Sbjct: 240 IEKEYVLKDMYDLIDGLD-IPEHKKKNGLKSFKNIINRAYITGREAHTLKGILRRLKMKM 298 Query: 241 K 241 Sbjct: 299 G 299 >UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPH4_NATPD Length = 264 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 16/241 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGN 59 + NI + +V GN+G++AR+MK GL+ L+LV+P PD +A A A DV+ N Sbjct: 1 MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFG 114 A V+ L V +A + + + +P ++P L + V +VFG Sbjct: 61 ATEVEF--SYLTEQFYTVACTATTNEDATKHVRYPFIEP--AALSDELAGLDADVCIVFG 116 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEE 174 RERVGLTN+EL + +I A+ +Y LNLA A ++ YE+R + ++ +Q Sbjct: 117 RERVGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTVEETQHPKQAHERA 176 Query: 175 TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 + ++E + + L G E P RRL RA P +E LRG+L Sbjct: 177 DEH----EIEGLHETFSEYLHEVGHPEEKIPK-TERLFRRLAGRASPTGREARTLRGVLR 231 Query: 235 S 235 Sbjct: 232 R 232 >UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RXM1_THEPD Length = 257 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 12/247 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + + + + VE + N+G +AR+MK L L+LV P ++ A A+D++ NA Sbjct: 12 LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLP-WPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 IV +L E + LV T+ P + P E S+ + +V GRE G Sbjct: 72 VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGEMA--SLFAESTGSKLVVIGREDWG 129 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ EEL C V I ANPEY SLN + A ++ YE+ + + Q++ E+ P Sbjct: 130 LSAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLER--------PP 181 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 +++E F HL G+ E +++ ++RL R +L IL G++ + Sbjct: 182 REEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLVRDSLET 240 Query: 240 NKGNKAE 246 K E Sbjct: 241 IKRTHRE 247 >UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria RepID=Q02AK8_SOLUE Length = 252 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 7/239 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 N+R+VLV T + N+G+ ARAM G + L +V P +A + A GA+ ++ A Sbjct: 18 NNLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREARS-AVGAAPLLQKAEE 76 Query: 63 VDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 ++ A+A C LVVGT++ R L P+ + PVAL+FG E+ GL+ Sbjct: 77 FPSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLS 136 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NE+L CH+ + I + S+NL AV + YE+ A E+ Sbjct: 137 NEDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYEL-----ARDPKAALASPEKIRSANAG 191 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LE+ L + L +G++ K+RRL R ++ ++ G+L I + Sbjct: 192 ELEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQILWKL 250 >UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae RepID=Q1D9N7_MYXXD Length = 240 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 123/243 (50%), Gaps = 9/243 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ +R VL+ + N+G+ ARA+K GL++ V P V+ A LA A DV+ A Sbjct: 1 MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 DTL+EA+A C VVGTS+R L PR G + VA A PVALVFG ER GL Sbjct: 61 RRADTLEEAVADCVWVVGTSSRK-VEGKRRLPPRAVGEELVARAPQGPVALVFGDERSGL 119 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN E+++ H A+ PE S+NLA AV + AYEVR+A L Sbjct: 120 TNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAMLEAAATPPGPLPA---AATD 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILRGILASIE 237 +L + LE L GF+ + PG+ +R LF R+R +E + L S+ Sbjct: 177 AELAQVESTLESVLTTGGFLVDAQPGR--TAVRDLFAPLRRSRLTRKEARLWLAALHSLR 234 Query: 238 QQN 240 ++ Sbjct: 235 KRQ 237 >UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIE5_9BACT Length = 278 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 7/234 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I ++LVE + GN+G++AR M ++L +V + P+ LA + +++ N + Sbjct: 7 FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKV--PEKNDFYLAMHSEEILENVN 64 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 I TL++A+ G V+ S R P + K V ++ + LVFGRE GLT Sbjct: 65 IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 + E + C ANP + SLNLA AV + +E+ ++ G++ + Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYYNS----ASGK 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 +L+ ++ + + GF + L ++ + P+ L LR + Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMFNR 233 >UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma RepID=Q9HJF9_THEAC Length = 291 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 16/240 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ IVLV + GN+G+VAR+M GL +L ++ PD +A A + G ++ NA I Sbjct: 49 ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGNR--PDDEAFARSMGGRFILENAEI 106 Query: 63 VDTLDEALAGCSLVVGTSAR----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 D ++ +++ TS+ + L P + + + +ALVFGRE Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLPLTPEKFWEEMSDQ--GGKIALVFGREDD 164 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NEE++KC+Y + I NPEY NL+ AV +I Y V EN E E P Sbjct: 165 GLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIE----P 219 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +DL ++ + + T + E+ LRRL R+R +E + G++ +++ Sbjct: 220 DHEDL--MLRNIIEVMRLTSY-PEHKIRNTELLLRRLIARSRMSDREYFRMMGVIRRVKE 276 >UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO Length = 235 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 14/230 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M GLT+L +V D A A ++ NA I + Sbjct: 7 ISVVLVEPKYQGNIGAVARSMANSGLTDLRIV--KTPIDEDARRRAMHGLYILDNARIYN 64 Query: 65 TLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D+A++G ++ GTS S+ + P VALVFGRE GL Sbjct: 65 SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFW--DNYGLNGKRVALVFGREDNGLN 122 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N EL KC++ + I NPEY NL+ AV +I YE+ + E Y + Sbjct: 123 NYELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEMIKRVYSGNI------IESNNYISPE 176 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 E+ L G+ + ++ RR+ R+ E + G Sbjct: 177 HFNIMINRFEELLNLLGYEKP-KVDKLSVMARRIAARSNITDAEYFKIMG 225 >UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Q0_DESAH Length = 226 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 3/212 (1%) Query: 26 KTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84 MGL L +V P ++A A A+ ++ I TL +ALA VVGT+AR Sbjct: 1 MNMGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLG 60 Query: 85 TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLN 144 + PR L+ N VAL+FG E GLTN E+ CH + I +SSLN Sbjct: 61 GQRL-VESPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIPTLG-FSSLN 118 Query: 145 LAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENH 204 LA AV ++ YE+ +A Q + + V +LE Y L L G++ + Sbjct: 119 LAQAVVIVCYELLVAVEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVNPEN 178 Query: 205 PGQVMNKLRRLFTRARPESQELNILRGILASI 236 P +N++R+ +R + ++ E I++G++ I Sbjct: 179 PDFWLNRVRQFLSRIKIQAGETGIVKGVIDRI 210 >UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae RepID=Q1DAL2_MYXXD Length = 243 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 5/236 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 + + +VL +T T N+G+VAR M G + L L P++K A LA + V+ + Sbjct: 5 EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 L EAL C VGT++R++ +L P E + E+ VALVFG E+ G+++ Sbjct: 65 TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 E+L +C +AI + S+NLA + V+ Y L EE P + Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLT-----PTAAVEEAPGAKLGT 179 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 L + +L F+ P V+N+L + RAR +E + +E+ Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQREAELWLTAFKHLER 235 >UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus marinus F1 RepID=A3DMM1_STAMF Length = 231 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 18/240 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +R+VLV + N+G +AR G+ L+LV P +A+ AA ASD + A IVD Sbjct: 3 VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADL-EEALRYAAKASDYLKKAIIVD 61 Query: 65 TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 L +A+ LVV T+A+ + + R+ + + +A++FGRE GLT Sbjct: 62 DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVE--MVKGRVNRLAILFGRESTGLT 119 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 +EL+ V I ANPEY LNL+ AV V +E+ EN P D Sbjct: 120 RKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEIWNIRGVRAENIP-------PSAGRD 172 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI----LRGILASIE 237 ++E F L + +++ ++M +++ R+R E + LR +L +E Sbjct: 173 EIE-FILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLGKLE 231 >UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30 Tax=Enterobacteriaceae RepID=C9XV28_CROTZ Length = 239 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 102/240 (42%), Gaps = 16/240 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + I+LV + N+G+ ARAMKTMG T L +V D A +A GA D++ N Sbjct: 11 LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120 DTL AL V T+ARSR P++ +AA PV ALVFGRE GL Sbjct: 71 RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL + +Y SLNL AV V Y++ T P Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLTALMQNTPT--------AAPQADQ 182 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQ 239 L+ ++ L G + + R E ++ +L +L IE++ Sbjct: 183 QQLKALRLRIDALLTTLGVEDDLKMADWLQ------QRLGLLEQRDTAMLHRLLHDIEKK 236 >UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28473_ARCFU Length = 226 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 17/237 (7%) Query: 9 LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68 LVE N+G +AR K G+ L L V ++ AA A DV+ NA +V+ L E Sbjct: 2 LVELKIPENVGFIARVAKNYGIKRLCLYKCRV--TEESYHTAANAKDVLENAVVVEDLQE 59 Query: 69 ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128 L +L+VGT+ L + + A VA++FGRE GL NEEL+ C Sbjct: 60 FLQRMNLIVGTTGIPGGDYK-YLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMC 118 Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYG 188 H V + + EY +N++ A VI Y +R + E+ D+E Sbjct: 119 HVLVRVPTSEEYPVMNVSHAAAVILYFLREI---------ERVQEDDEIATFRDIEVTLS 169 Query: 189 HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN----ILRGILASIEQQNK 241 +L + L + E+ + + RR+ RA + E++ I R ++ I++ N+ Sbjct: 170 NLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNR 225 >UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae RepID=D2PC46_SULIS Length = 237 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 16/236 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IR+VLVE N+G VAR + + L++VNP S+A +AG + + A IV+ Sbjct: 2 IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 DEA+ + + TS+ + +L + ++ VALVFGRE VGLT EE Sbjct: 61 NFDEAINDVDIKIATSSIA-DNNGDILRKSIRPWELLSLIQGKKVALVFGRESVGLTREE 119 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----------AWLATQENGEQVEHEE 174 + KC + + I ANP Y LNL+ AV ++ YE+ + ++ Q + E Sbjct: 120 IFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQSIKLIDRYAE 179 Query: 175 ---TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227 DD + Y L++T++ G E +++ LR+L+TR +E+N Sbjct: 180 ILYKMLKRSDDDYKMYIALKRTIIK-GVKDEEEARVIVHFLRKLYTRIIHNEKEMN 234 >UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VNS2_ALCBS Length = 223 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 4/217 (1%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE + N+G+ ARA+KTMG + L LVNP + A +A ++DV+ A IV Sbjct: 2 DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNP--GDMTAAHWVAHHSNDVLEQAMIV 59 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTN 122 D+L +AL L +G +AR R +D C + + VA+VFGRE GLT Sbjct: 60 DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCAALVAGKGNSVQRVAIVFGREASGLTG 119 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +EL C +I + SLNLA AV + A+E+R + T + Sbjct: 120 DELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELRKQPAVKITEPDPATFSHTRQAVHQQ 179 Query: 183 LERFYGHLEQTLLA-TGFIRENHPGQVMNKLRRLFTR 218 L + + L + + + +R+L R Sbjct: 180 LASLHIQPNENLHQWVDELLPLANDRELGLVRQLLRR 216 >UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=B4UHH1_ANASK Length = 269 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 20/257 (7%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----------------LVKPDSQA 46 IR+VL N+G+ AR MK GL+ L +V P ++A Sbjct: 5 KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64 Query: 47 IALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN 106 +A ASD++ A I L A+ + V GT++R+ P L+PR + V +A+ Sbjct: 65 RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRA-VEGRPWLEPRGLAAELVRRSAD 123 Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 VA+VFG ER GL++ EL+ C I Y S+NLA AV V+AYEV A Sbjct: 124 GEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGAA 183 Query: 167 GEQVEHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224 + ++ +E + + L A G++ +P ++ RRL RA P + Sbjct: 184 PAEAPPGRGGDAPARIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPTQR 243 Query: 225 ELNILRGILASIEQQNK 241 E+ +L G L S+++ + Sbjct: 244 EVELLLGALRSLDRVLR 260 >UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10 Tax=Halobacteriaceae RepID=B9LNN3_HALLT Length = 290 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 113/228 (49%), Gaps = 16/228 (7%) Query: 15 TGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGNAHIVDTLDEALAG 72 GN+G++ARAMK GL++L LV+P K D +A A A DV+ NA V T DE +A Sbjct: 49 PGNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVAN 107 Query: 73 CSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 VGT+A + +P P E L+ + + P A+VFGRE GL NEEL + Sbjct: 108 YH-TVGTTAITGEDDQSHERFPFKTPVE--LRESLKTVDAPTAIVFGREGRGLNNEELSQ 164 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFY 187 +I A+ +Y LNL A V+ YE+R + + + D+ERF+ Sbjct: 165 LDEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP----DVERFH 220 Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 L ATG RE+H + +RRL RA P +E++ L G Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTFRK 267 >UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus RepID=A9WAF6_CHLAA Length = 239 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 5/243 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + +I ++L + N+G+V RAM G +L LV+P + A+A V+ N Sbjct: 1 MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSR-TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L EA+A +VGTS R LPW + A+ PVA++FG E GL Sbjct: 61 VHAHLSEAIADIRYLVGTSDRPHPGLPWRNDVRQWANETRQRAASTGPVAILFGSEGNGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + +EL C + + +Y LNLA AV ++ YE++ P + Sbjct: 121 SRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQ----VTTPLAPPPPPGEPPATL 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E Y + + T F++ + +LR + RA ++ +L +L + ++ Sbjct: 177 AARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREVLRKL 236 Query: 241 KGN 243 + Sbjct: 237 ERR 239 >UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas RepID=A0KMM3_AERHH Length = 230 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 14/239 (5%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLV + N+G+ ARAMKTMG + LV V + +A +A GA +V+ A Sbjct: 2 KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 DTL+EALA LVV T+AR R L P E + A+ + VA+VFG E GL+NE Sbjct: 62 DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +L + + Y SLNL A+ + AYE+ + E V++ + Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYELSQLLDEPEVLAENVDN-------AGQV 174 Query: 184 ERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + L G ++ Q M+++ ++LN+L + + ++ Sbjct: 175 RVLKSKTAEILGDLGVSQDEKLHQWVMDRV------PMLPQRDLNMLHLLCKDLARKLG 227 >UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BNA8_HYPBU Length = 239 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 16/242 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61 +R+V+V N+G +AR + +LV+P+ P+S +A AA ++ Sbjct: 7 PRVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVI 66 Query: 62 IVDTLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +VD+L+EAL G L V TSA+ + + PRE + VA+VFGRE V Sbjct: 67 VVDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFAEEI--APRYESVAVVFGRESV 124 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLT +EL KCH V I ANP Y LNL+ AV ++ YE+ ++ E Sbjct: 125 GLTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYELYNTRRGEKQLHE--------PA 176 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + LER Y HL + LA + QV L+ + R E ++L + + Sbjct: 177 RGETLERIYEHL--SWLAEKLVDRERVSQVKAALKHILWRCSITGGEASMLYYFAKKLRK 234 Query: 239 QN 240 + Sbjct: 235 RL 236 >UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG9_ELUMP Length = 225 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 11/234 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I I+LV+ + N+G+ ARAM GL++L + + +A A A GA D++ A I D Sbjct: 2 ITIILVKPRNPNNIGASARAMANFGLSDLRIAGAHIPNLEEAQA-AVGAEDLLKKAKIFD 60 Query: 65 TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 L +ALA C+ TS ++R ++ +A+VFG E+ GL+ + Sbjct: 61 NLQDALADCNFAFAATSLKNRNTQKEIVS----LPNINNHIKRGKIAVVFGSEKTGLSVK 116 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +++ C + I + S+NLA AV ++ YE A +N + ++ ++T P D+ Sbjct: 117 DIELCDAVLNIPTTTKQPSVNLAQAVNLVCYET-----AKTKNFKTLKQQKTNLPSFKDI 171 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 + + + F +E ++ + + ++L I++ L ++ Sbjct: 172 DLLTADILELFDRKEFKKELTKTDRELLIKNILKSSSLSKKQLFIIKKFLNLLK 225 >UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97 Tax=Enterobacteriaceae RepID=LAST_ECOLI Length = 228 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 I I+LV + N+G+ ARAMKTMG ++L +V+ + +A G+ D+I N + Sbjct: 2 RITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTN 122 TL E+L V T+ARSR P E L + + ALVFGRE GLTN Sbjct: 62 PTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EEL + +Y SLNL AV V Y++ A L Q Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQL--ATLIQQPAKSDAT------ADQHQ 173 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQN 240 L+ L + + R E ++ +L +L IE+ Sbjct: 174 LQALRERAMTLLTTLAVADDIKLVDWLQ------QRLGLLEQRDTAMLHRLLHDIEKNI 226 >UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4 Tax=Moraxellaceae RepID=Q4FSH9_PSYA2 Length = 298 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 130/276 (47%), Gaps = 41/276 (14%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +I++V+V T+ N+GS ARAM TMGL+ L +V P + D+ +++ AAG SD++ +A Sbjct: 24 LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP------------- 108 I TL+ A+A C LV S+RSR LP P++ P + + Sbjct: 84 IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143 Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 +A++FGRE GLTNEEL YH+ I ANP Y LN+A AVQVIA + A Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFIF--AYAQTHIKA 201 Query: 169 QVEHEETPYPLVDDLERF---------YGHLEQ-----------------TLLATGFIRE 202 E P + D LE ++ ++ Sbjct: 202 NSEANNNPLEVTDSLETLGQPMLNTYTRQQWDEPAITQQQLQQLTERTTALMVQHKLADS 261 Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + + ++L RL +R + + +E ++ ++A + + Sbjct: 262 ENLKSLPSRLSRLGSRIQLDQKEYQLISALIAKLAK 297 >UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ3_9BACT Length = 240 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 13/241 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ + ++L N+G +ARAM G ++L + A+ A ASD++ NA+ Sbjct: 1 MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVG 119 +T +E ++ +V+G + RS + P E V+E +T V L+FG E G Sbjct: 61 HPETFEELISTSDVVIGFTPRSPFSTNNL--PYEELKDFVSETVSTGLKVGLLFGNEASG 118 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L N+EL C + V++ + +Y S+NLA AV V ++++ + E + E Y Sbjct: 119 LNNKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK--------DIEPDKEAEAEYAD 170 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL-ASIEQ 238 + + ++ L + + +P + ++R++ R +E ++ + SI + Sbjct: 171 RNTIGTLLQRIKDHLELIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFGKSISR 230 Query: 239 Q 239 Sbjct: 231 Y 231 >UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT47_TERTT Length = 233 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 17/230 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + +LV + N+G+ ARAMKTMG L LV + D +A +A GA D++ +A Sbjct: 2 LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L L++GT+AR R L P E L S + LVFG E GL+N++ Sbjct: 62 DLASLKPDFDLLIGTTARERGSARRYLSPPE--LNSQLSQQSGRSGLVFGCEASGLSNDQ 119 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L C + I Y SLNL AV V +Y + E P ++ Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGL--------EDEAPDARQIQ 171 Query: 185 RFYGHLEQTLL-ATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 + L T E +M L AR ++L + ++ Sbjct: 172 HLKNRAAEFLAPHTDSKTEKLSEWLMESL------ARLSDRDLRMAHQLI 215 >UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U6V8_MARAV Length = 226 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 100/240 (41%), Gaps = 18/240 (7%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLVE N+G+ ARA+ TMG + LWLVN + +A LA G+ ++ NA I Sbjct: 2 KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120 L L++GTSA+ R +P L+SV V ALVFGRE GL Sbjct: 62 PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 NEEL C Y SLNL+ AV + A+E+ + E V + + L Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWELSGLARQSNSTPE-VASDASLGALR 178 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE LE +RL +++ + ++E++ Sbjct: 179 QRLETLLPALEA---------PADSKLSQWVFQRL---PMLSERDVGFAHTLCGNLERKL 226 >UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii RepID=A8J9D1_CHLRE Length = 154 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 2/153 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++LVE N+G+ ARAMK GL +L +V P P+ A+A ++ A+D++ A + D Sbjct: 2 AVILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYD 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNE 123 +++ A+A V +AR+R + P + ++ + AA P A L+FGRE GLTNE Sbjct: 62 SVEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNE 121 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E+ + + I ANP Y LNLA A+ ++YE+ Sbjct: 122 EVALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154 >UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6J8_DESK1 Length = 234 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 10/241 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +RIVLV N+G +AR + L++V P+ +A+ AA D + A + D Sbjct: 2 LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKPVASI-EEALNYAARGKDFLLKARVTD 60 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNE 123 +LDEA+ G +V TS + + + G VA++FGRE GLT E Sbjct: 61 SLDEAIKGVDMVAATSDEGYSAGDMLRQAVDLNGFAEKIFPRTRSVAILFGRESTGLTRE 120 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ K V I ANP Y +LN++ AV ++ +E+ T N P + L Sbjct: 121 EISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIP-------PLASKETL 173 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 + L + E + RR+ +A +E +LR L + + N Sbjct: 174 RQLLD-LTVEISKLVMTTEEKITRSRILWRRILGKALLTEKEAALLRYWLQRVRRHISSN 232 Query: 244 K 244 K Sbjct: 233 K 233 >UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67P01_SYMTH Length = 257 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 7/203 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + +VL + N+ ++ R M GL++L LV P + +A +I Sbjct: 8 LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 TL+ ALA C L +GT+ R R +L PR + +A VA++FG ER GL Sbjct: 68 RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP----- 176 N L CH + I +P SLNLA A VIAYE+ MAW + Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAWTQPNDGPAHRPPAAAAPPDAT 187 Query: 177 --YPLVDDLERFYGHLEQTLLAT 197 + E + +++ L A Sbjct: 188 ESLATGAEREALFAAVDELLSAL 210 >UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ Length = 232 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 17/243 (6%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI- 62 + + VE N+G++AR K +L+L+NP V +A +A A D++ A Sbjct: 2 RVIVFFVEPEKVDNIGAMARVCKNFN-ADLYLINPKVDNYEKAFVVAKHAQDLLQKAIEN 60 Query: 63 -VDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 ++++DEA + VGT+ + + L P E + + + + GRE + Sbjct: 61 KLNSIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAERFANS--DIKLGIFIGRESI 118 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLTNEEL K + V I AN EY LN A +I YE+ H P Sbjct: 119 GLTNEELSKMDFIVTIPANKEYPILNATHATAIILYELFKHSKE--------GHVNLALP 170 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + ++ ++++ + + +R+L T+ S+E N L G SI + Sbjct: 171 KKEQIDVLLDYVKKIIDKLP-QPDYRKEYYFIIMRKLITQGIINSREANTLIGFFRSIYE 229 Query: 239 QNK 241 K Sbjct: 230 NLK 232 >UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ Length = 209 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 12/219 (5%) Query: 25 MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSAR-- 82 M G+ +L LV + D A + ++ N DTL+EALA C + + TS Sbjct: 1 MVNFGIDDLALVK-GCEIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIKP 59 Query: 83 SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSS 142 W P+ AL+FGRE GL EL C + I NP++ Sbjct: 60 EGDKRW-FRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNPKFPI 118 Query: 143 LNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRE 202 LNL+ AV ++ YE+ +G ++ ++ ER + L T + R Sbjct: 119 LNLSHAVGIVLYEIYR-------DGNHKNPKKRKAVSNEEFERLVDRIMDLLEETSYPR- 170 Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + LRRL +R P+ E L GI +I++ + Sbjct: 171 RRLDRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209 >UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba RepID=B0EAZ5_ENTDI Length = 350 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 11/236 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 I +VLV H N+G+V R G+ L++VNPL K ++I ++ + I A I Sbjct: 96 KISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVIC 155 Query: 64 DTLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++L+E C+L+VG +AR + ++ +E G + + LVFG E GL Sbjct: 156 NSLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAG--DMLSTMKGCLGLVFGNESNGL 213 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 EE C I Y LNL+ AV + + M +G + E + Sbjct: 214 NTEECDACDLLNKIDIRSHYPVLNLSHAVGIALNYMHM----RLRDGGDLVPEGCKENIA 269 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + ++ L + + E + +++L R +E L G ++ Sbjct: 270 KEKGELLEQWKEILHSV--MNEQREIGAVESMKKLLGRVMLTEREAAALDGAFKAL 323 >UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQC6_FIBSS Length = 269 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 17/242 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNA 60 ++ R+VLVE H N+G VARAM L L++V P K ++ AA + D++ NA Sbjct: 1 MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYPKRDKVLDKSYHTAANSHDILDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V ++A+ CS V S R + ++ M+ L + +ALVFGRE Sbjct: 61 KVVHKFEDAIGDCSCAVAYSRRIFASSIKHTMVQNLSDML-----PEDGTIALVFGRESC 115 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHE---E 174 GL EE+ C Y I P SLNL AV + YE+ R LA E + E Sbjct: 116 GLALEEVNACTYQCEIPV-PGLMSLNLGQAVSISLYELCRSGALANGEGRAKRTTRGVAE 174 Query: 175 TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 T + ++ F L++ L + + + L L R P EL+ L G+L Sbjct: 175 TGPATIQQIDGFKKFLDRYLTG----QYHDQAWRDSFLNTLLQRLHPTRNELSALFGLLR 230 Query: 235 SI 236 ++ Sbjct: 231 NL 232 >UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHK3_BDEBA Length = 261 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 18/250 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IRIVLV T + N+G+ +RAM MG+ L L++P + +A AA + N Sbjct: 7 IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66 Query: 65 TLDEALAG--CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--------VALVFG 114 + DE + S+ V +AR + D E +A V LVFG Sbjct: 67 SWDEFMKQEPESIKVAFTARDGKGRQ-VRDVDEVLKDIADKAPQFQVESDVPYVVHLVFG 125 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEH 172 E GL E+L+ ++ I + SLNLA A + Y +R W T+ +G +V Sbjct: 126 PEDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRR 185 Query: 173 EETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRG 231 +D LE+ GF + V LRR+ + P +EL IL Sbjct: 186 APQGIDGIDPEATLKTWLEEM----GFDLTRQRKINVFTVLRRMLLQNTPTKKELVILET 241 Query: 232 ILASIEQQNK 241 +L ++ + Sbjct: 242 VLQQSIRKLR 251 >UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL7_9EURY Length = 234 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59 M++NI++ VE + N+G AR +K + ++LVNP K + + AI + A D+I N Sbjct: 1 MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSA---RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 A I+ L+ + S VVGT+A +SR ++ E ++ + L+ GR+ Sbjct: 61 AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRGKSIEN-MTLLIGRD 118 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL +EEL +C+ V I + Y +LN++ A+ ++ Y L Q+ + Sbjct: 119 NTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLY-----ALTAQKPSSWPQEIGEL 173 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 Y DL ++ + +IR V + RA P +E+N L + Sbjct: 174 YADSSDLRMIKSLFGASVDSNPYIR--KKETVKKAFENMLVRANPTKKEINALTAAFSK 230 >UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2 Length = 241 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 8/237 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NI VL E N+GS RA+ G L LV P+ + +A + ++ Sbjct: 5 IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +L EALA S VVG S RSR + P E A AA PVA VFGRE GL Sbjct: 65 ETFASLGEALANVSYVVGFSGRSRGERQAVSLP-EFAPTLTALAATAPVAFVFGREDRGL 123 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N +++C ++I +P Y SLNLA AV + Y +R + + Sbjct: 124 DNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIRGLATSAEPL------PSPDLADQ 177 Query: 181 DDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASI 236 E L+Q L F R + +R L R+RP E+ ++ I + Sbjct: 178 ASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAICRKM 234 >UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7Q2_KORCO Length = 246 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 15/248 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + ++ ++LVE N+G +ARAMK G L +V P+ + +AIA A A DVI Sbjct: 1 MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60 Query: 62 IVDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I+ TL+EA G L++GT+AR SR P L S+ + + LV GRE +GL Sbjct: 61 ILTTLEEARRGVDLMIGTTARVSRYSVERRAIPIRDLLSSI--SWDAVYGLVLGRESIGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 T EEL C I ++ +Y +LN+A A +I YE +A+ + E Sbjct: 119 TTEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAFKDSS-------RFEVKPVPR 171 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELNILRGILASIE 237 + E ++ + + G +R+ + + +RR+ R +E + GI+ ++ Sbjct: 172 EAREVMIRYIGEVIDLLGGMRDR--ERFLFTMRRMIERTFPCGISEEEASQALGIIKAVR 229 Query: 238 QQNKGNKA 245 K Sbjct: 230 DALARVKG 237 >UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SV68_PHYPA Length = 287 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 34/253 (13%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG--ASDVIGN 59 L+ +R+VLV H GN+GSV G+ +A +AA + + + Sbjct: 24 LERVRVVLVSPQHAGNVGSVNPQCDFRGV--------------EAQTMAANVTSRSKLEH 69 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 + DTL EAL CS+ VG + RS L P + + +A+VFGRE G Sbjct: 70 IRVTDTLPEALKDCSMAVGFTRRSGILRIP---DTRLANLCIPPLDSLNLAIVFGREDRG 126 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--------QVE 171 LTNEEL C + +I + SLNL+ AV V+ + Q + Sbjct: 127 LTNEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLYEQIPHEQAHDPSNYVPIHSTSF 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLLAT-------GFIRENHPGQVMNKLRRLFTRARPESQ 224 ++ +E E L A G +++ +RR+ R P + Sbjct: 187 KNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRMLLRTGPSLK 246 Query: 225 ELNILRGILASIE 237 EL L G L +E Sbjct: 247 ELGFLHGFLTMVE 259 >UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria RepID=B0CFB1_ACAM1 Length = 243 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 22/241 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62 +LVE+ N+G+ ARA+ TMG T+L LV P +S+ A LA G+ V+ A I Sbjct: 2 QFSFILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121 L +AL T+AR R + + RE + A+ VA VFG ER GL Sbjct: 62 YQNLSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLN 121 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 ++ C I Y SLNLA AV V ++ + + + ++ TP P ++ Sbjct: 122 RHDIDCCDLITTIPQGNPYPSLNLAQAVMVYSFMLSESAVHIKDQ----RLNRTPMPPLE 177 Query: 182 DLERFYGHLE----QTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 Y +L+ Q + G + E + V L AR +++L +L I A I+ Sbjct: 178 -----YANLKHSSLQLMERIG-LAERYQKYVTRGL------ARLGTEDLYLLHNIRACID 225 Query: 238 Q 238 + Sbjct: 226 R 226 >UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola RepID=Q73KY3_TREDE Length = 251 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 15/245 (6%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVD 64 I+L + N+G+V R M G ++L + D + + LA AS V A Sbjct: 6 TIILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYP 65 Query: 65 ----TLDEALAGCSLVVGTSARSRTLPWPM-LDPRECGLKSVAEAANTPVALVFGRERVG 119 L EA + CS+++GTS R+ + + P + L + + + LVFG ER G Sbjct: 66 PTIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCLD-LKKFYGGRLGLVFGNERTG 124 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L +EEL C + V I A ++ S NL+ AV ++ Y + +A + E L Sbjct: 125 LIDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIAEKNNPLTEKDNPSIEKNIYL 184 Query: 180 VDDLERFYGHLEQ----TLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 + + L G ++ L + A + E +I+ L Sbjct: 185 QKASMKMIQENSEQICNYLSGLGLFKKGGKKTNETFFIELLSSAG--ASEFDIMH--LTE 240 Query: 236 IEQQN 240 I ++ Sbjct: 241 IFKKL 245 >UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella RepID=A1S6F2_SHEAM Length = 225 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 1/152 (0%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + +VLVE + N+G+ ARAMKTMG T L L+ + +A +A GA+D++ NA ++D Sbjct: 2 LSVVLVEPARAANVGAAARAMKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLD 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 + D+ A L++ T+AR R P L+P E + ++ ++ +ALVFGRE GL+N+E Sbjct: 62 SFDDLRAEFDLLIATTARERGSPRTFLNPEELAI-TLGQSGAQSMALVFGRESSGLSNQE 120 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 L +C + +Y SLNL AV V Y + Sbjct: 121 LSQCDLFSYVPLAGDYPSLNLGQAVMVYTYAL 152 >UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RS14_OSTLU Length = 445 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 100/241 (41%), Gaps = 65/241 (26%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN------------------------ 37 L N+R V+ N+G+ AR M+ G+ +L LV+ Sbjct: 62 LSNVRFVMCAPQGPANVGAAARVMQNFGIYDLALVDVGPFVLTTTTRSGDATREISDEAS 121 Query: 38 ---------------------PLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLV 76 PL +A+ A A ++ +A D +EAL GCS V Sbjct: 122 EGEGRAPERASEVLGSEARTTPLC---EEAMRYACAADWLLADAERCDDAEEALRGCSFV 178 Query: 77 VGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAA 136 + T+AR R+ P++ RE + EA VA++FG ER GLTN+EL H VAI Sbjct: 179 LATTARPRS-GTPLMTAREAAERVREEAKRGKVAVLFGNERTGLTNDELSWAHAAVAIPT 237 Query: 137 NPE---------------YSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 +SLNL+ AV ++AYE+ MA NGE + E+ VD Sbjct: 238 AGAGKICRKSLKYTGGTGPTSLNLSHAVGILAYEIFMACGGEATNGEILP-EKAKLLTVD 296 Query: 182 D 182 + Sbjct: 297 E 297 >UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8Q9_IGNH4 Length = 228 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 16/234 (6%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62 +R+VLVE N G + R K + + V P D + + AA D + + Sbjct: 2 KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 VD EAL G LVV TSA+ + P+ D + LVFGRE VGLT Sbjct: 62 VDDYKEALEG--LVVCTSAKV-SSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTR 118 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETPYPLVD 181 EEL++C + + A+P+Y +NL+ AV V+ +EV + + E+ + + L Sbjct: 119 EELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLAL-- 176 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 L + L+ E +V ++RL +A QEL L +L+ Sbjct: 177 ---GVAERLARALIK----DEAKRERVTVAIKRLLAKA--TRQELRNLLYLLSK 221 >UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J096_CHLRE Length = 324 Score = 157 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 27/257 (10%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-----DSQAIALAAGASD 55 +L ++R+VLV H N+G+VARA NL++V P +A +A G Sbjct: 22 LLSDVRVVLVAPKHEANIGAVARAAANFECLNLYIVAPRCDGAAAGWTGEARKVACG-DS 80 Query: 56 VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPW----------------PMLDPRECGLK 99 V+ A +VDTL++ALA S +G + R+ P+ P Sbjct: 81 VLDRAVVVDTLEQALADTSSSIGFTRRTGAARRTHASLGHLLAEFPFALPLQPPPVAVPT 140 Query: 100 SVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 S A A ALVFGRE GLT EL+ C Y AI S+NL+ AV + E+ Sbjct: 141 SAAAAGPCATALVFGREESGLTEAELRLCSYASAIPTGRVQPSMNLSHAVAAVLAELFSR 200 Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219 E + + + + G ++ + LR + +RA Sbjct: 201 RCGLLAEVELLLRK---VAAIAEAVGMSGA--ESKGGGNNGNHGRRRLPLGHLRAVVSRA 255 Query: 220 RPESQELNILRGILASI 236 R + E L G+ + + Sbjct: 256 RVNAAESRSLHGLASGV 272 >UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YEM3_AERPE Length = 243 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 15/243 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ +RIVLVET N+G VAR + ++LV+P +A AA A+ + A Sbjct: 1 MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASL-EEAKRYAARAAWRLDAAR 59 Query: 62 IVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 +V L+EAL G S + TS+ R L P E V A VA+VFGRE VG Sbjct: 60 VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAE--VLAATPGTVAIVFGRESVG 117 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LT E+ C + +I A+P Y SLNL+ A + YEV A V+ E Sbjct: 118 LTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKARRGGAVARGGVDEELIKLLR 177 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 LA+ + +V L R+ +++ +E+ L +L+ + Sbjct: 178 A----------YAAALASRLVHRERAEEVAVSLVRIASKSVMARREVENLIYLLSKACRA 227 Query: 240 NKG 242 +G Sbjct: 228 VEG 230 >UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q0C6T9_PELCD Length = 166 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 66/126 (52%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M + IR++LVE GN+G VARAM G++ L LVNP +A A A+ ++G A Sbjct: 5 MSKRIRVILVEPQSPGNIGMVARAMGNFGVSELRLVNPCTYLHPEARKFAVRAAPLLGKA 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L ALA + V + R+ L +LD + + A V LVFGRE GL Sbjct: 65 RVFPDLASALADLPMSVAATRRAGKLRGELLDVADAARLAAGLPAVEGVGLVFGREDAGL 124 Query: 121 TNEELQ 126 T++E+ Sbjct: 125 TSDEVS 130 >UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H8_9CHLO Length = 467 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 95/246 (38%), Gaps = 49/246 (19%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP----------------------- 38 L N+ VL N+G +AR M+ G+T+L +V P Sbjct: 75 LDNVCFVLCRPQGPQNIGGIARVMQNFGVTDLRIVAPEPGALAPPFDAADEYDRAIHPPE 134 Query: 39 ---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE 95 +A A A ++ +A T DEALA + V T+AR R + D R Sbjct: 135 VRARAPLSDEAHKFAVHADWLLRDARRCATADEALADVAFVAATTARPRE-NLSIADVRA 193 Query: 96 CGLKSVAEAANT-PVALVFGRERVGLTNEELQKCHYHVAI----------------AANP 138 AAN VA+VFG E GLTN+EL + + V I Sbjct: 194 ASEVLRRHAANGTKVAVVFGNEATGLTNDELARANLGVMIATSAATSSPASSRKRYTGAK 253 Query: 139 EYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATG 198 +SLNL+MAV V+AYE+ A + +G + VD+ R L + Sbjct: 254 GATSLNLSMAVGVVAYELFQAMGEGEVSG-----FGSRLMTVDERARLADELAGARRSLD 308 Query: 199 FIRENH 204 +R H Sbjct: 309 VLRRRH 314 >UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q01FK7_OSTTA Length = 384 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 91/238 (38%), Gaps = 62/238 (26%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWL--VNPLVKPDS--------------- 44 L+N+R VL N+G+ ARAM+ G+ L L V P V Sbjct: 55 LENVRFVLCAPQGAANVGACARAMQNFGVYELKLCEVGPNVLERDDAGETAATRGTESDA 114 Query: 45 ---------------------------QAIALAAGASDVIGNAHIVDTLDEALAGCSLVV 77 +A+ A A ++ +A ++ ALAGC+ V+ Sbjct: 115 ERILDEASEGEGKTPERAANQTLPLSAEALRYACAADWMLEDAERCADVEAALAGCTFVL 174 Query: 78 GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAAN 137 T+AR RT P++ RE K EA VA++FG ER GLTNEEL V + Sbjct: 175 ATTARPRT-GTPLMTAREAAKKVAEEAKRGKVAVLFGNERTGLTNEELAWASAAVVVPTA 233 Query: 138 PE---------------YSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +SLNL+ AV +IA+ RM + + + E Sbjct: 234 GAGKLCRKSLKYTGATGPTSLNLSHAVGIIAH--RMKTRTRTFSKREAKAFERVLAAA 289 >UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcus RepID=A4S331_OSTLU Length = 344 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 40/204 (19%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGL-TNLWLVNP-----LVKPD--------SQAIALA 50 + VL N+G+ AR ++ L ++L +V P D A A Sbjct: 1 VSFVLCAPEGPLNVGAAARVIQNFSLPSSLRVVRPSASVLRDDDDGASAPRLHEDAYKFA 60 Query: 51 AGASDVIGNA-HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTP 108 A ++ + +++ EA+A SLVV T+AR R P+L K E A Sbjct: 61 VHAKWMLDDCCARGESVLEAVAEASLVVATTARPRE-NLPLLTLGAACEKMRDEIARGGK 119 Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANP-----------EYS------------SLNL 145 A++FG ER GLTNEEL+ + V+I + +YS SLNL Sbjct: 120 CAILFGNERTGLTNEELELAEFGVSIPTSATVGTSAMARRNKYSGGAGVDGSQTATSLNL 179 Query: 146 AMAVQVIAYEVRMAWLATQENGEQ 169 MAV V+AYE+ A +E+ E Sbjct: 180 GMAVGVVAYELFSQVHAVREDDET 203 >UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FIG4_9CHLO Length = 506 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 91/260 (35%), Gaps = 80/260 (30%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-------DSQAIAL---- 49 +L N+ VL N+GSVAR M+ G+ +L + +P D A Sbjct: 76 LLGNVCFVLCGPQGPQNVGSVARVMQNFGIYDLRITDPGPFVLAGGGTRDEDATPADGAS 135 Query: 50 ---------------------------------------AAGASDVIGNAHIVD-TLDEA 69 A+ A + A+ D Sbjct: 136 SSGGINSGAALGPDGLGSDLPEALRPTRIDSGGNPADDPASPAPPLCDEAYRFACAADWL 195 Query: 70 LAG-------------CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 LA C+ V+ T+AR R P++ R EA VA++FG E Sbjct: 196 LADAKRCDTALEAISDCTFVMATTARPRG-NVPLVTARVAAEMLAKEAKRGKVAVLFGNE 254 Query: 117 RVGLTNEELQKCHYHVAIAANPE---------------YSSLNLAMAVQVIAYEVRMAWL 161 R GLTNEEL + H VAI + +SLNL+ AV V+AYE+ MA Sbjct: 255 RTGLTNEELAQAHACVAIPTAGQGTLCRRSLKYTGGTGPTSLNLSQAVGVLAYEMFMAAD 314 Query: 162 ATQENGEQVEHEETPYPLVD 181 A G + + + + Sbjct: 315 AANGVGTRGDGDGDGDGDGE 334 >UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C4T4_THAPS Length = 167 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 24/156 (15%) Query: 28 MGLTNLWLVNP---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGT----S 80 MG +L LV P V + I A+GA DV+ NA TLD+A+ G ++V GT Sbjct: 1 MGFNDLTLVKPHDLKVLHRQKVIQRASGAMDVLTNAQTYSTLDDAVDGFNVVCGTGMPFD 60 Query: 81 ARSRTLPWPMLDPR-----------------ECGLKSVAEAANTPVALVFGRERVGLTNE 123 L ++PR + + + +ALVFG E+ G+T Sbjct: 61 MYQTRLEREYVEPRIYFDGLISNVIANNHSTDDTNDRHQHSNSIRLALVFGSEKTGMTES 120 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 ++ CH + I NP++ SLNLA AVQ+IAY+ R+A Sbjct: 121 DMDTCHVMLGIPTNPQFGSLNLAAAVQLIAYDWRVA 156 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 16/152 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA--SDVIGNAHIV 63 +VLVE + GN+G++ R G + + LV P D A+ + GA S I Sbjct: 118 VVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIARTSWP 177 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L A +VG+S R A P+ LV G ER GLT+E Sbjct: 178 DLLTWARQHRIALVGSSDRG-------------ASDYRATTYPRPLLLVLGSERHGLTDE 224 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 +L C V I SLNLA+A ++ YE Sbjct: 225 QLAACDLVVRIPMRGRSDSLNLAVAAGILMYE 256 >UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria RepID=C3RH76_9MOLU Length = 246 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 +VLV GNMG++ R M TNL ++ P V D + I + GA I N ++ Sbjct: 96 VVLVNPGDMGNMGTIIRTMLGFNYTNLAIIRPGVDVFDPRVIRASMGALFNI-NFEYFNS 154 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123 DE L T R + ML G K++ + AAN +LVFG E GL ++ Sbjct: 155 FDEYL--------TKYPEREVYPLMLK----GAKNIHQITAANNKHSLVFGNESSGLPDD 202 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 L+ V I + + SLNL+MA+ + M ++ Sbjct: 203 YLKY-GQSVFIPHSDKIDSLNLSMALGITLCHFSMMEFKDKQ 243 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 23/172 (13%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59 ++ + L GN+G+V R +G + L+ P S A S + Sbjct: 142 NDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYR 201 Query: 60 AHIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 A D L+ LVVGT + RT+P+ AN PV L+ G Sbjct: 202 ASEADFLNWRKGFSGLVVGTHLKGAVDYRTIPY----------------ANKPVILIMGN 245 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 E+ GL + C I SLNLA+A V+ YE+R L E G Sbjct: 246 EQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297 >UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF Length = 272 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63 V VET GN G++ R +G + V P + A+ S V N +I Sbjct: 122 VPVETREPGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNID 181 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L + + ++ T+A E L E + P A +FG E GL E Sbjct: 182 DVLGQLRSQGLQILATAADG-----------EVDLDDAGELLSRPTAWLFGNEAHGLGEE 230 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 L K + V I SLNLA A + YE A A + Sbjct: 231 LLAKADHRVRIPIRGRAESLNLATAASICLYESSKALFADEA 272 >UniRef50_A4RVJ3 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVJ3_OSTLU Length = 233 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 20/184 (10%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60 L+++ ++ N+G++ARA + + PL + +A + A GA ++ A Sbjct: 55 LRDVCVIFCSPKTASNVGAMARACAAFECCDFRVATPLCDVECRACVNAAKGAQWLVPRA 114 Query: 61 H-IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-------------AAN 106 +L++AL G VGT PW + D ++ + Sbjct: 115 ADAHASLEDALRG---TVGT--VVGFHPWRLDDAEAEASRARFDDLAALTAAYPGGGEDG 169 Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 +ALVFG E GL+ EL C +I SL++ A + A A+ E Sbjct: 170 GKLALVFGNEADGLSERELALCDALCSIPMGRLIESLSVTHAAVIALSRFFEAREASAEA 229 Query: 167 GEQV 170 + Sbjct: 230 RRRF 233 >UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9R5_9CHLO Length = 447 Score = 95.6 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60 L ++ +VLV T GN+G++ARA +L LV P P ++A ++ A GA ++ A Sbjct: 138 LSDVAVVLVGTKKAGNVGAIARACGAFECEDLRLVAPRADPYTRASLSAAKGAQHIVHGA 197 Query: 61 HIVDTLDEALAGCSLVVG 78 + D +++AL GC + Sbjct: 198 GVYDDVEDALRGCDAAIA 215 >UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamicum RepID=Q8NQN8_CORGL Length = 198 Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 15/159 (9%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGAS---DVIGNAHIV 63 V VET GN G++ R +G + V P ++A+ +AG+ V N +I Sbjct: 49 VPVETREPGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIA 108 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L + + ++ TSA E L E P A +FG E GL Sbjct: 109 DVLGQLRSKGLQILATSADG-----------EVDLDDADELLAKPTAWLFGNEAHGLDES 157 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 L + + V I SLNLA A + YE A A Sbjct: 158 LLAQADHRVRIPIRGRAESLNLATAASICLYESSKALFA 196 >UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria RepID=Q11C30_MESSB Length = 286 Score = 94.1 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 15/167 (8%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59 +++ + L GN+G++ R + +G + LV P S A S + Sbjct: 129 EDLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETVRATMGSVFSVPLAR 188 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 A L L+VGT + + + + PV L+ G E+ G Sbjct: 189 ADEAAFLAWREHFAGLMVGTHLKGSVDYRNV------------DYSGGPVLLLMGNEQQG 236 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 L ++ + C V I SLNLA+A V+ YE+R L Sbjct: 237 LPDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRRTALPASHG 283 >UniRef50_C9RBF8 RNA methyltransferase, TrmH family, group 2 n=9 Tax=cellular organisms RepID=C9RBF8_AMMDK Length = 152 Score = 92.9 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 22/155 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65 IVLVE N G++AR G T L LV PL D + + A + + D+ Sbjct: 3 IVLVEPEIPANTGNIARTCAATGAT-LHLVRPLGFYTDDRHLRRAGLDYWHLVKIYYHDS 61 Query: 66 LDE---ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + A + T+ R P LVFG+E GL Sbjct: 62 FADLCRAYPDACFFLTTTRAERWYTQVRYPPGSF--------------LVFGKESTGLP- 106 Query: 123 EELQKC--HYHVAIAANPEYSSLNLAMAVQVIAYE 155 EE+ + + I P SLNLA AV ++ YE Sbjct: 107 EEILQAFPDRWIRIPMVPGARSLNLANAVAIVLYE 141 >UniRef50_Q1QBK2 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Proteobacteria RepID=Q1QBK2_PSYCK Length = 186 Score = 92.5 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 11/178 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63 I IVLV N G++ R G L LV PL D + + A + + Sbjct: 3 IHIVLVAPKMPSNTGNIIRLCANSG-AQLHLVKPLGFELDDKKLRRAGLDYHEYAHLQVH 61 Query: 64 DTL---DEAL--AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 D +AL A C + + + + + +S ++ + VA+VFG E Sbjct: 62 DNWSIAKQALQDADCHTITALTTKLSKPFYDYDFGGQETAESGSDFSGNNVAMVFGSETA 121 Query: 119 GLTN---EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 GL + E++ + + + SLNL+ +V + YEV + G + +E Sbjct: 122 GLADDIREDIG-ADNWLRLPMLADSRSLNLSNSVAICLYEVWRQQGFGGDEGRSIGYE 178 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 91.7 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 16/154 (10%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHI-V 63 +VL GN+G++ R G L LVN P S A GA + + Sbjct: 110 YLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWETDL 169 Query: 64 DTLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 +T+ L G + + T+ R +D R+ LK A+V G E G+++ Sbjct: 170 ETVRALLDGADIPLYATALRE-----DTVDVRDVDLK--------RAAVVIGSEGRGISD 216 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E L C + I SLN AMA V+ +E+ Sbjct: 217 EALALCRRTIKIPMRARCESLNAAMAAGVVLWEM 250 >UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae RepID=B1ZWW3_OPITP Length = 250 Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 26/159 (16%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV----KPDSQAIALAAGASDVIGNAHI 62 +VL + N+G++AR GL L L P +P A +A G + A + Sbjct: 100 LVLDRIGNAHNLGAIARTAAFFGLPRLIL--PRDPAAAQPSEAAYRVAEGGMTHLELARV 157 Query: 63 VDTLDEAL-----AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 D L L AG ++ + GL P+ALV G E Sbjct: 158 -DDLPAFLRSLVAAGYDVIGAATR--------------GGLPQAQSHTGKPIALVLGNEE 202 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 GL+ E C V I + + SLN+++A V+ +E+ Sbjct: 203 HGLSAEVAAACTRLVTIPGSGKVESLNVSVAGAVLIWEL 241 >UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZL1_HERA2 Length = 266 Score = 91.0 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 + L + GN+G++ R +G L L+ P AI + G+ + T Sbjct: 120 VALNGVGNPGNLGAIMRTCDAVGCEGLILIGDTTDPYHPAAIRASMGSLFALRMVRT--T 177 Query: 66 LDEALA----GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 DE A V+GT+ + + + +P L+ G ER+GL+ Sbjct: 178 FDEFAAWKQTNGYHVIGTT-------------PDVEQEYQTISYPSPAILLMGSERLGLS 224 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 E C V I SLNL +A ++ YE+ Sbjct: 225 VGEQSVCDTLVRIPMAGTCDSLNLGVATSIVLYEMFRQQ 263 >UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW91_STRCL Length = 182 Score = 89.0 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 10/159 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63 + ++L N+GS+ R +G+ L+L P +++A + G + Sbjct: 27 VALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYLD-VQTF 85 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 +TL EA+ R+ L+ + + + + G E G++ + Sbjct: 86 ETLPEAVERV--------RADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQ 137 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 L C I SLN+A A+ V YEVR A Sbjct: 138 ALGMCDAVAFIPQLGRVGSLNVATALAVACYEVRRQDWA 176 >UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3 Length = 274 Score = 87.9 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 9/165 (5%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 + +VL GN+G++ R G+ +WL V P S + ++ S ++ Sbjct: 119 ARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQ 178 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + +L L ++ L + + P ++FG E GL+ Sbjct: 179 LQSLPPLLEKFH--------TQGLQL-IATVPQATQTLWEIDFQRPTIVIFGSEGQGLSA 229 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 L+ + VAI P+ SLN+A+AV V+ YE R A G Sbjct: 230 PVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAASTPG 274 >UniRef50_C6XJZ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJZ6_HIRBI Length = 275 Score = 85.6 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASD----VIGNAH 61 I L E GN+G++ R G+ + LV P S + + GA V+ + Sbjct: 125 IALYEARDPGNLGTILRTADAAGIDGVILVEQCCDPFSVECVRATMGALFSNNIVLASFT 184 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 D ++ + ++ + T+ + ++ ++ G E+ G+ Sbjct: 185 EFDNW---RRKANIKMAAASVNGTMRHDQAE------------YSSKSVILMGNEQSGIP 229 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 C + I SLNLA A ++ YEV Sbjct: 230 EAAENACDILIKIPMAGAADSLNLAQATAIMTYEVWK 266 >UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ED00_9CHLO Length = 369 Score = 85.6 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNA 60 L+++ +V+V + GN+G++ARA + +L LV P V P S+ +++ A GA V+ A Sbjct: 80 LEDVCVVVVGSKKAGNIGAIARAAASFECEDLRLVAPRVDPTSRSSLSSAKGAQHVVHGA 139 Query: 61 HIVDTLDEALAGCSLVVG 78 ++ EA+A C V Sbjct: 140 GEYLSVAEAIADCDAAVA 157 Score = 65.2 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Query: 83 SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSS 142 + +P+ K+ +ALVFGRE GLT+EE+ C I S Sbjct: 262 EHGWKRRVYNPKNRNQKNR---GRGKLALVFGREVDGLTDEEVNLCDAACRIPTGRLIES 318 Query: 143 LNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+++ A +I + + + ++ P Sbjct: 319 LSVSHAAVIILSQYYQHRASAAGHAPRLSELPVMAPA 355 >UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699FF1 Length = 92 Score = 85.6 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 150 QVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM 209 Q++AYEV +A L + + E + LE F+ HL Q L GF +++ Sbjct: 1 QLLAYEVYLASLEEADKPLRAPRE---VASAEMLEGFHTHLAQALEDIGFADPRQSDKLL 57 Query: 210 NKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 +LR LF RARP+ E+NILRGIL++ + + + Sbjct: 58 RRLRALFHRARPDRDEINILRGILSAAQGRKSMRR 92 >UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4L1_9CHLO Length = 513 Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 16/97 (16%) Query: 78 GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAAN 137 T+AR R P++ R AEA VA++FG ER GLTNEEL H VAI Sbjct: 197 ATTARPRE-NVPLVTARNAAKLLAAEAKRGKVAVLFGNERTGLTNEELGTAHAAVAIPTA 255 Query: 138 PEYS---------------SLNLAMAVQVIAYEVRMA 159 + S SLNL+ AV VIAYE+ +A Sbjct: 256 GQGSLCRKSLKYTGGTGPTSLNLSQAVGVIAYEMFLA 292 >UniRef50_A3DBN9 RNA methyltransferase, TrmH family, group 2 n=9 Tax=Clostridiales RepID=A3DBN9_CLOTH Length = 164 Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 24/158 (15%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIG--NAH 61 I +VLVE N G++AR +G NL LV PL + + + A D N Sbjct: 3 INVVLVEPEIPQNTGNIARTCAAVG-ANLHLVKPLGFSVEDRYLKRA--GLDYWDKVNIK 59 Query: 62 IVDTLDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 D+ E T+ +++ L + P +C +VFG+E Sbjct: 60 YYDSFSELRDKYKEHIFYYSTT-KAQKLYTDVKYPDDCF-------------IVFGKETA 105 Query: 119 GLTNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 GL E L + + + I + SLNL+ +V +I YE Sbjct: 106 GLPEELLVENKEWCIRIPMRDDIRSLNLSNSVAIIVYE 143 >UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY95_HYPNA Length = 271 Score = 84.0 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 12/156 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63 + I L E GN+G++ R G++ + L+ P S +A+ + G+ + Sbjct: 123 LYIALYEVRDPGNLGTILRTADCAGVSGVILIGTCCDPYSFEAVRASMGS--------VF 174 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D + A T + + A+ + ++ G E+ GL + Sbjct: 175 D-VPFAHTDFD-AFNTWRKGEGMSLTAASVNGTVRHDGADFTGGSI-ILMGNEQAGLPDW 231 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 C I SLNLA A ++ YE Sbjct: 232 VEAACDTLSLIPMRGGADSLNLAQASALMIYEAWRQ 267 >UniRef50_D2RKI7 tRNA/rRNA methyltransferase (SpoU) n=10 Tax=Bacteria RepID=D2RKI7_ACIFE Length = 156 Score = 84.0 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 23/167 (13%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 IVLVE GN G++AR G + L LV PL D + + A + + H D+ Sbjct: 4 IVLVEPEIPGNTGNIARLCAATGAS-LHLVRPLGFSVDDKYLKRAGLDYWHLVDIHYYDS 62 Query: 66 LDEALA---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 ++E LA + T+ ++ P L+FG+E GL Sbjct: 63 VEEVLAAYPDSPRFLLTTHAHKSYSRVHYGPDSL--------------LIFGKESAGLP- 107 Query: 123 EELQKCH--YHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQEN 166 E ++ H V I E SLNLA +V ++ YE +R QE Sbjct: 108 EAFRQAHEEECVRIPMVSEARSLNLANSVSIVLYEALRQNDFDLQEG 154 >UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD55_9FIRM Length = 264 Score = 83.7 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 8/153 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 ++L GN+G++ R G + L + + A+ A + D Sbjct: 120 YLLLSSLQDPGNVGTILRTAAAFGTDGVILSADCPDLYAPKVLRASMGGVFRARACVSDD 179 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L ++A R+ +P P E + + + A+V G E G+ E Sbjct: 180 LSASIAAL--------RAAGVPVWAAMPAEGSVSLRDISLHGGGAVVVGNEGGGIAPELA 231 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 C + I P SLN AMA VI +E+ Sbjct: 232 ALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 83.3 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 21/173 (12%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAH 61 + +VL N+G++AR+++ G+ + + P S + +AAGA + A Sbjct: 200 VLVVLDGIQDPHNLGAIARSVEAFGMQGMVI--PQRRAAGVTSTVMKVAAGALSTLPVAR 257 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L+ V GT++R + P+ALV G E Sbjct: 258 VVNLNRALEYLKEQGFWVYGTTSRG-------------ADPIYSADFQRPIALVVGSEGE 304 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171 G++ + C ++I SLN ++A + YE+ +V+ Sbjct: 305 GISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRPEVD 357 >UniRef50_Q2Y7V6 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Betaproteobacteria RepID=Q2Y7V6_NITMU Length = 279 Score = 83.3 bits (205), Expect = 7e-15, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 14/154 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 ++ ++L GN+GS+ R+ G ++++L N S AA + + H Sbjct: 129 ESFCVLLEAIQDPGNVGSILRSAAAAGASDVYLSNDCADAWSPKTLRAAMGAHFLVRIHE 188 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121 L E +RT ++ KS+ + + PVA VFG E GL+ Sbjct: 189 RANLAEV-------------ARTFGGKVIASILDAKKSLYQMRLSGPVAFVFGNEGAGLS 235 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 +E LQ H + I + SLN A A V +E Sbjct: 236 DELLQVAHERITIPMPGDAESLNAAAAAAVCFFE 269 >UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJH2_9BACT Length = 264 Score = 82.9 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 19/163 (11%) Query: 2 LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIG 58 L IVLV GN+G++ R + + + NP + +I + G ++ Sbjct: 110 LNKNSIVLVIEAPEKPGNIGALYRTAAAAKIDAVIIANPKTDFYNPNSIRSSLGGIFILP 169 Query: 59 NAHIVDTLD--EALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 A I +++ L + + T+A S+ +P+ + P ALV G Sbjct: 170 TA-IASSIEVIAYLKENKITIATAAINSKAVPYDQFE------------YTPPCALVMGT 216 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 E GL L + + ++ I E SLNL+++ ++ YE + Sbjct: 217 ESTGLDQLWLNETNQNLMIPMADEVDSLNLSVSAGILMYECQR 259 >UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_LEPBJ Length = 277 Score = 82.5 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 14/164 (8%) Query: 2 LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIG 58 + ++ +LV GN+G++ R + G + + +P + + I + GA Sbjct: 124 FKKLKPILVIEGVEKPGNLGTILRTAEGAGFHTVIVSDPKLDLFNPNVIRASTGALF--- 180 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 TLD L + G + + P E +ALVFG E+ Sbjct: 181 ------TLDVYLGEIETIYGI-LKKNHYRTLAVTP-EAKKFYFDADLKGKIALVFGSEQY 232 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 GL++ ++++ E SLNLAM+ ++ YEV Sbjct: 233 GLSSYARNHSDEYLSLPMLGEADSLNLAMSAGILMYEVIRQGFE 276 >UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C1B1 Length = 276 Score = 82.1 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 14/152 (9%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 ++ VE + GN+G++ R +G + L V P +S+A+ +AG+ + T Sbjct: 131 VIPVECNDPGNVGTIVRMTDALGAGAVILAGDSVDPLNSKAVRSSAGS--------VFHT 182 Query: 66 LDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKS-VAEAANTPVALVFGRERVGLTNE 123 +VV R R + L + L V + PVA +FG E GL+ E Sbjct: 183 PVARERDIDVVV---ERVREAGFTTLATAMDGALTLGVDALPDGPVAWLFGNEAHGLSEE 239 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 VAI E SLNLA A + +E Sbjct: 240 ITASAGASVAIPIKGEAESLNLATAAAMCLWE 271 >UniRef50_B8CX36 RNA methyltransferase, TrmH family, group 2 n=20 Tax=Clostridia RepID=B8CX36_HALOH Length = 162 Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 59/169 (34%), Gaps = 24/169 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI--V 63 IVLVE N G++AR G ++L L+ PL D + + A D I Sbjct: 3 IVLVEPEIPQNTGNIARTCAVTG-SSLHLIEPLGFSIDDRYLKRA--GLDYWDKLDIYYY 59 Query: 64 DTLDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 D+L+E + + T+ + + +VFG+E GL Sbjct: 60 DSLEELMKKYKDSNFYFATT--------------KAPKSYDIVSYQENDFIVFGKETAGL 105 Query: 121 TNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 L + I SLNL+ +V +I YE E Sbjct: 106 PESLLKNNIENCIRIPMKDNTRSLNLSNSVAIILYEALRQLNFPGLKHE 154 >UniRef50_C7N513 Predicted rRNA methylase SpoU family n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N513_SLAHD Length = 159 Score = 81.7 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 13/163 (7%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +I +VL E N G+VAR +G T L LV P+ ++ L D + + Sbjct: 5 PHIHVVLFEPEIPQNTGNVARTCAVVGAT-LHLVEPMGFRLTE-RNLKRSGCDYWDDVDV 62 Query: 63 V--DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 V +++ L+ + L C V LVFGRE G+ Sbjct: 63 VKHASVEAFLSQHG--------NDELHLFTSHTETCYTDVRYGEGGGDVYLVFGRESRGI 114 Query: 121 TNEELQ-KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 + L V I SLNL+ AV V YEV W Sbjct: 115 DEDVLAAHVDRCVRIPMRHNMRSLNLSNAVAVGVYEVIRQWGG 157 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 81.7 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 56/167 (33%), Gaps = 29/167 (17%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS------- 54 ++ + +VL GN+G++ R G + L V P + + A S Sbjct: 102 MKKV-LVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVT 160 Query: 55 --DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALV 112 D++ L E V GT A VALV Sbjct: 161 SVDLLEK------LPELKEDGFHVYGT-------------ALSKATSYEQVAFEEKVALV 201 Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 G E G+ + L C V I + SLN A+A ++ Y + + Sbjct: 202 IGNEAQGVHADVLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_A7BD02 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD02_9ACTO Length = 246 Score = 81.3 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 7/152 (4%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VL + GN+G++ R G + V V S + ++ S +V + Sbjct: 88 VVLAQGRDPGNVGTIIRTADAFGAVGVVAVAGTVDAASPKVVRSSAGSVFHIPVCVVPSF 147 Query: 67 DEALA----GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 +A A + ++GTS + ++ L + +S + A VFG E GL+ Sbjct: 148 ADARALIHGRSAALLGTSGGAASISLSDLLVQVVSARSRL---SQSHAWVFGNEARGLSG 204 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 +E++ C V+I + SLN+A A + Sbjct: 205 DEMRLCDGLVSIPMTGDAESLNVASAAATCLF 236 >UniRef50_C6X216 Putative rRNA methylase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X216_FLAB3 Length = 257 Score = 81.3 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 I++ GN+G+V R+ + G+ L + +P V + I + G + I + Sbjct: 109 IIIESVEKPGNLGAVLRSCEAFGIDALIITDPKVDFYNPNVIRSSVG---CLFGMDIFQS 165 Query: 66 ----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 L + L + T+ + + ALVFG E GL+ Sbjct: 166 ENNALLDFLESNHFKIFTTR-----------MSDDATDIFNQDFGGRSALVFGTEHSGLS 214 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 + + K + + SLNL+ AV V YE+ L Sbjct: 215 DFWIGKGTNTL-VPMTGSIDSLNLSNAVAVSGYEILRQKL 253 >UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC90_9RHIZ Length = 269 Score = 81.3 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 25/158 (15%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAG---ASDVIG-NAH 61 + L E GN+G++ R G + LV P S A+ G A ++ Sbjct: 124 VALEEIRDPGNLGTIVRTADATGCAGVILVGTTCDPYSLDAVRATMGSIFAVPIVKMERS 183 Query: 62 IVDTLDEALAGCSLVVGT--SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 +L A AG V+GT +AR + P +V G E G Sbjct: 184 AFISLQRAWAG--DVIGTHLTAR----------------EDFRSLYREPQLIVMGGEGPG 225 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 L++E C V I + SLNLA+A ++ Y++R Sbjct: 226 LSSEAAASCTKLVKIPMAGKLDSLNLAVATGLMLYQIR 263 >UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAQ0_DESAH Length = 291 Score = 80.2 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 9/168 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + I L N+GS+ R+ G ++L L N + ++ A G +D + + Sbjct: 131 LLDFHIALDGLRSLFNVGSIFRSCDAAGFSSLILGNTPGRENAAVRKTAMGTADWMPHTQ 190 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 VD L + L +++ ++ E + LV G E G++ Sbjct: 191 TVD-LAQTLVDM--------KAQGYTITAVETAEQSKPYHDNDWHHRGVLVVGNEEYGIS 241 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169 + L C V I +SLN+A A ++ + + A + Q Sbjct: 242 SHVLAVCDQVVHIPMFGRKNSLNVANAAAILMFHITTCLHAGHPDPGQ 289 >UniRef50_C7R3Q5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3Q5_JONDD Length = 275 Score = 79.8 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 12/163 (7%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGAS---DVIGNAHIV 63 VL + GN G+V RA G + L V + + + +AG+ VI NA +V Sbjct: 120 VLTDVRDPGNAGTVIRAADAAGADVVILAGDSVDLMNPKVVRSSAGSLFHMPVITNASLV 179 Query: 64 DTLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 D + AL + + GT+ P+ L + + P A VFG E GL+ Sbjct: 180 D-VHGALKMAGIPLFGTT------PYADLTLDDLVEPQGPTSVGAPHAWVFGNEAQGLSV 232 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 E+ C V I SLNLAMA + Y A T Sbjct: 233 EDQSMCDSLVRIPMYGRAESLNLAMAATICLYTSARALRTTTR 275 >UniRef50_C7HXS5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thiomonas intermedia K12 RepID=C7HXS5_THIIN Length = 262 Score = 79.8 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 20/154 (12%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVD 64 ++L GN+G++ R G ++L+ + + A GA VI + + Sbjct: 113 ALILDRVQDAGNVGTMLRTAAASGCGAVYLLRGCAGVWSPKVLRSAMGAHFVIP---VFE 169 Query: 65 T--LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121 ++ L +P P+ + E PV +FG E G++ Sbjct: 170 DPPWEQVLN-------------IVPRPIYATHMQADTVLYELDLKEPVTWIFGNEGQGIS 216 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 + + KC V I SLN+A + + YE Sbjct: 217 DALVAKCSALVRIPQADGVESLNVAASAAICLYE 250 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 79.8 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + IVL + GN+G++AR+ +++G + + N + +AGA I A + Sbjct: 109 LIIVLDHITDAGNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQV- 167 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLTN 122 L +AL AR + + + E + +A V LV G E GL Sbjct: 168 ANLQQAL----------ARLKNEGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLAR 217 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 + C + V++ SSLN+A + V YE Sbjct: 218 LTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQ 254 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 79.8 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 18/159 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI-VD 64 ++ GN+G++ RA + G + + + P S +A+ +AG+ + + V Sbjct: 113 VIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIKVTVK 172 Query: 65 TLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 ++E ++ G +LV+ + + S P+A+VFG E G++ Sbjct: 173 EIEEFVSKYGLNLVI--------------TDLKATISSFNMDFTKPLAIVFGNESKGVSQ 218 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 + H I + SLN+AMA I YE+ Sbjct: 219 DLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQRF 257 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 79.8 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 12/155 (7%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65 ++L N+G++ R+ + G + L P ++ AI +AGA++ + + + Sbjct: 99 VILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTN- 157 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLTNEE 124 L A+ R + W + E G + P+ALV G E GL Sbjct: 158 LARAIEQLQ--------QRNV-WVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRLT 208 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 ++C AI SLN+++A V YEV Sbjct: 209 RERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQ 243 >UniRef50_B2A6C6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=B2A6C6_NATTJ Length = 152 Score = 79.8 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 25/164 (15%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI--- 62 +VLVE N G+++R T L LV PL + + A D Sbjct: 3 VVLVEPEIPPNTGNISRTCAVSN-TTLHLVEPLGFSISDRELKRA--GLDYWDKLSYQVH 59 Query: 63 --VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +++ L + + T+ R + + + PR+ LVFG+E GL Sbjct: 60 ENFTSVENLLQTHPIYIATT-RGKNYYYDIEYPRDSV-------------LVFGKETEGL 105 Query: 121 TNEELQKC-HYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLA 162 + + K + I P++ SLNL+ +V V+ +E +R Sbjct: 106 PDWIINKYYENSIRIPMAPDFRSLNLSNSVAVVLFEALRQQSFP 149 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 79.8 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 17/173 (9%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 +VL N+G+ R G+ + + V + +A+GA D + + + Sbjct: 99 LVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNL 158 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 TL E +VGT+A + + P+A V G E G+ Sbjct: 159 ARTLRELKEMGLWIVGTAA-------------DAPDTLDSVTLTRPLAWVLGAEDGGMRR 205 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 + C V+I + SLN++++ + +E +G V + Sbjct: 206 LTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQRTGSGLNVPAPKN 258 >UniRef50_B3E096 tRNA (Cytosine34-2'-O-)-methyltransferase, SpoU class n=5 Tax=Bacteria RepID=B3E096_METI4 Length = 161 Score = 79.4 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 15/158 (9%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65 +VLV N G++AR + L LV PL + A+ A D + Sbjct: 12 VVLVAPQIPQNTGNIARICAAT-FSELHLVKPLGFSLEDAALRRA--GLDYWKEVRLF-- 66 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L E +A + + A A + LVFGRE GL+ L Sbjct: 67 LWEGWDHF------TAANPRKRLLFFETGTYPPYFTASFAPGDM-LVFGRETKGLSQRIL 119 Query: 126 QKC-HYHVAIAA-NPEYSSLNLAMAVQVIAYEVRMAWL 161 H+ +I N + SLNLA V ++ YE L Sbjct: 120 SFSPHFIYSIPILNGKVRSLNLANCVSIVLYEALRQIL 157 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD- 64 +VL + GN G++ R+ + +G + + N + A +AGA + A + + Sbjct: 191 VVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVSNL 250 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 L+E A G++ +ALV G E G++ Sbjct: 251 PRALEELKAAGFWTCGST-------------EHATQSVWEAPMGGRLALVMGSEGSGISR 297 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 L+KC + + + SLN+A A V+ YE Sbjct: 298 LMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEW 331 >UniRef50_A8SKI8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI8_9FIRM Length = 234 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 12/148 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 I+L E GN+G++ R G N+ +++ D + + + GA + N I T Sbjct: 93 ILLCEPRDKGNLGTILRTALGFGFKNIAIIDGCDVFDPKTVRASMGAIFKM-NVEIFKTF 151 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 +E + + +L+ LK+V P L+FG E GL N +L Sbjct: 152 EEYKN--------TFEENNIYSFILNKGSVSLKNVEIKK--PFTLMFGNESHGLENFDL- 200 Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAY 154 K V I + + S NL +A + Y Sbjct: 201 KGTTPVFIEQSEDIDSFNLPIASSIAMY 228 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 22/182 (12%) Query: 9 LVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIVD- 64 L + N+G+V R+ + MG L L P A +AAGA + + A +V+ Sbjct: 388 LDGITDPHNLGAVVRSAEAMGAHGLVL--PQRRSAGLTGSAAKVAAGAMEHLPVARVVNL 445 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 +L++ V+G +A E + + P+ LV G E GL+ Sbjct: 446 NRSLEKLKDSGYRVIGLAA-------------EGDVTLMDVDLEGPLVLVTGSEDQGLSL 492 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPLVD 181 + C V I SLN ++A + YEV R W+ P Sbjct: 493 LTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRNWMKDIHGQAPSPPIVRPQMKTQ 552 Query: 182 DL 183 ++ Sbjct: 553 EV 554 >UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neisseriaceae RepID=B9Z0Z0_9NEIS Length = 264 Score = 79.0 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 12/153 (7%) Query: 13 SHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAG 72 GNMG++ R+ G+ ++L S + A + + N H L E L G Sbjct: 124 QDPGNMGTILRSAAASGVMEVFLSKGCADVFSPKVLRAGMGAHFVLNLHEAADLAEVLGG 183 Query: 73 CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHV 132 + ++ E A+ VA VFG E G++ LQ V Sbjct: 184 FA------------GRKLVTHLEGSQSLYAQDLRGDVAFVFGNEGAGVSAGLLQLADCRV 231 Query: 133 AIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 I SLN+AMA + +E A+ Sbjct: 232 RIPMPGHAESLNVAMAATICLFERVRQLDASAA 264 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 79.0 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 21/163 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63 I+L + N+G++ R G L P +AGA + + A + Sbjct: 97 IILDQVQDPHNLGAIIRTAYAAGAHGLIY--PRKRSADITPVVTKASAGAVNHLPLAKVS 154 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T+ + + GT R P PV LV G E G+ Sbjct: 155 NINYTIADLKDMGLWITGTDVRG---TRPYYSAD----------YKGPVGLVIGNEGKGM 201 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 + C + V I + E SLN ++A V+ +EV +T Sbjct: 202 RRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRST 244 >UniRef50_A9NFI2 RNA methyltransferase, TrmH family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFI2_ACHLI Length = 173 Score = 79.0 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 58/159 (36%), Gaps = 16/159 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK--PDSQAIALAAGASDVIGNAHI 62 I +VL + N G++ R G+ L L+ PL D++ A D + N I Sbjct: 2 IHVVLCQPEIPQNTGNIMRTCVGSGVH-LHLIKPLGFKIDDTKLRRSAVDYYDAL-NFEI 59 Query: 63 VDTLDEALAGCSLVVGTS-ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + + GT SR P +A + LVFG E G+ Sbjct: 60 HEDFESFQNEHP---GTYLYLSRYGRKTHSAPN-------YQAIKGDIYLVFGSESYGID 109 Query: 122 NEELQK-CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 L K I N + SLNL+ AV + YEV Sbjct: 110 RALLSKNIENTFRIPTNDKIRSLNLSNAVAITVYEVLRQ 148 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 20/160 (12%) Query: 2 LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA---SDV 56 LQ +LV GN+G++ R+ G + + +P+ + + A+ S Sbjct: 144 LQRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVP 203 Query: 57 IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGR 115 + A L A + T+ K +A P+A+V G Sbjct: 204 LVVAESAPVLAWLRAQGVRTIATT--------------PAAEKLYTDADLRGPLAIVMGS 249 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 E+ GL+ L+ C V I + SLN+AMA + +E Sbjct: 250 EQYGLSEFWLKNCDLPVRIPMAGQADSLNVAMATIITLFE 289 >UniRef50_C8W249 RNA methyltransferase, TrmH family, group 2 n=2 Tax=Clostridiales RepID=C8W249_DESAS Length = 168 Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 64/173 (36%), Gaps = 27/173 (15%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI-ALAAGASDVIGNAHIVDT 65 IVLVE N G++ R + L LV PL A + + D+ Sbjct: 3 IVLVEPEIPANTGNIVRTCAATS-SVLHLVRPLGFSTEDKYLKRAGLDYWYLVEIYYHDS 61 Query: 66 LDEALAGCSLVVGT-----SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 EAL +GT + +R P + LVFG+E GL Sbjct: 62 F-EALKE-KYPLGTFYYVSTKAARHYCDVEYGPGDF--------------LVFGKETRGL 105 Query: 121 TNEELQKCHY--HVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQENGEQV 170 E L + + V I + SLNLA +V ++ YE +R A E +V Sbjct: 106 P-ESLLQANSGNCVRIPMVSDARSLNLANSVAIVLYEALRQQAFAGLETAGRV 157 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 21/166 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIGNAHIV 63 ++L N+G+ R+ G+ ++ P +A GA+++ + Sbjct: 100 LILDGVKDPHNLGACLRSANAFGVR--AVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVT 157 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T+D +VGT E +A+V G E GL Sbjct: 158 NLSRTIDWLQKEGVWIVGT-------------AVEAETLIQEIDLTGDIAIVLGSEGAGL 204 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 ++C + I SLN+++A + YEV+ A + Sbjct: 205 RRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQREAPAPS 250 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 78.3 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 21/159 (13%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63 I+L + N+GS+ R +G + + P + ++ +AGA + + A + Sbjct: 131 IILDGITDAYNLGSILRTADAVGAHGVVI--PKRRAIGLNAAVSKASAGAIEYVPVARVT 188 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T++ +VGT + P E LK PVALV G E G+ Sbjct: 189 NISQTIEYLKKKNIWIVGTDL---SGEKPFF---EADLK-------GPVALVIGSEGEGM 235 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 +KC + V I + SSLN A+A +I YE+R Sbjct: 236 GRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQ 274 >UniRef50_B0SDE0 rRNA methylase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDE0_LEPBA Length = 155 Score = 78.3 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 21/156 (13%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNAH--IV 63 I L N G++AR G+ L +V P +A+ A D + Sbjct: 3 IALFRPEIPPNTGNIARLCVNAGVP-LSIVGEPAFDLSEKAVRRA--GLDYWKDLELHRY 59 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS-VAEAANTPVALVFGRERVGLTN 122 D T + + G K + ++ +FGRE GL Sbjct: 60 PDWDWFQKE----------KETQGKRIFLVSKFGKKVYWDVSFSSKDVFLFGRETSGLP- 108 Query: 123 EELQK---CHYHVAIAANPEYSSLNLAMAVQVIAYE 155 EE+ K ++I S+NL+ AV +I YE Sbjct: 109 EEIHKGHPSDQIISIPMAESSRSINLSNAVAIILYE 144 >UniRef50_C4ZI93 RNA methyltransferase, TrmH family, group 2 n=7 Tax=Firmicutes RepID=C4ZI93_EUBR3 Length = 167 Score = 78.3 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 20/159 (12%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60 + + IVL E N G++ R G T L L+ PL +A+ A + Sbjct: 1 MAKLNIVLHEPEIPANTGNIGRTCVATG-TRLHLIEPLGFSLSEKALKRAGMDYWKDLDV 59 Query: 61 HIVDTLDEALA---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 ++ L G + T+ +P ++FG+E Sbjct: 60 TTYVDWEDFLERNPGAKIYYATTKGRHVYSDAHFEP--------------DCYIMFGKES 105 Query: 118 VGLTNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 G+ E L + + I E SLNL+ +V ++ YE Sbjct: 106 AGIPEEILKEHPDECIRIPMIGETRSLNLSNSVAIVLYE 144 >UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH71_PLALI Length = 262 Score = 78.3 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 17/150 (11%) Query: 13 SHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH---IVDTLDE 68 N+G+V RA G+ + P A ++AG + I A + L+ Sbjct: 126 QDPHNVGAVFRAAAFFGVRGIIATRDRSAPLSGTAYDVSAGGLESIPFAQPPNLARALEL 185 Query: 69 ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128 A V+GTS + A+ P +V G E GL L+ C Sbjct: 186 AKKSGVWVLGTS-------------EHAQQPLSSIKADRPWLIVIGNEEGGLRRLTLELC 232 Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 I + SLN+++A ++ Y + Sbjct: 233 DEVCTIPSQGAVGSLNVSVATGILLYALSR 262 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63 ++L E N+GS+ R +G + + P V + + GA + I A + Sbjct: 100 LILDELEDPHNLGSIMRTADAVGAHGIVI--PKRRAVGLTTTVAKASTGAIEHIPVARVT 157 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + TL+E VVGT A +R N P+ALV G E G+ Sbjct: 158 NLARTLEEMKERGIWVVGTDASARE-------------DFRNMDGNMPLALVIGSEGKGM 204 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 +KC + + + + +SLN ++A ++ YEV E Sbjct: 205 GRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE 249 >UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Actinomycetales RepID=D1A1M0_THECD Length = 289 Score = 77.9 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 59/180 (32%), Gaps = 23/180 (12%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63 VL GN G+V R G + + V P + A+ S V+ Sbjct: 121 VLAHVRDPGNAGTVLRTADAAGCDAVVFTDASVDPYNGKCVRASAGSLFHVPVVAGTR-F 179 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-----PVALVFGRERV 118 +TL AL C L V L G ++ A + P A VFG E Sbjct: 180 ETLIGALRECGLTV-------------LAADGAGEHTLDAALDGGLLDRPTAWVFGNEAW 226 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL E L+ + V + SLNLA A V Y A A + + Sbjct: 227 GLPEEILRAVDHVVRVPIYGRAESLNLATAAAVCLYASARAQRAGRAVPGAAPADGVSSA 286 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 77.5 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 17/157 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV-DT 65 IVL GN+G++ R G + L V + + + S + + Sbjct: 111 IVLDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLYNDKVLRSMQGSHF--HIPVFQAN 168 Query: 66 LDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 L E L + V +A R T VA+V G E G+++ Sbjct: 169 LQEYLPILKEKGVQVAVTALHRDSK-----------DYSVLQGATDVAIVVGNEGQGVSD 217 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 + + V I + SLN+++A ++ Y+ + Sbjct: 218 DVIDLADVVVTIPIFGKAESLNVSIASALLMYKTKET 254 >UniRef50_B0TZX6 rRNA methyltransferase n=3 Tax=Francisella RepID=B0TZX6_FRAP2 Length = 250 Score = 77.5 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + +VL GN+G++ R +GLT + L++ V P + +AI GA + Sbjct: 101 DDFILVLDRIQDPGNIGTILRTAIAVGLTEIVLIDGTVDPFNPKAIRAGMGAQFSL-KFR 159 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + L A+ + + R + W + P E E + LVFG E G+ Sbjct: 160 YFENL-SAVRNYP-----TLKERKI-W-LTTPHEGVSCYSEEFKLSNSVLVFGEEANGI- 210 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 E+ + I SLN+A A + +E Sbjct: 211 -EDFSVGEKTM-IPTLSNIESLNVAQAATIYLFE 242 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 77.5 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 21/162 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63 ++L E N+GS+ R + G+ + L P + + GA + + A + Sbjct: 154 VILDEVEDPHNLGSIVRTAELFGVHGIIL--PKRRSASVSTTVYKSSVGAIEHVKIAKVT 211 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T++E + G R+ + + P A++ G E G+ Sbjct: 212 NLNSTIEELKEKGIWIYGADIRAEEYSYQV-------------DFGGPCAVIIGNEGRGI 258 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 + ++KC + I + +SLN ++A +I YEV L Sbjct: 259 SKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGRLK 300 >UniRef50_A4SYT6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Polynucleobacter necessarius RepID=A4SYT6_POLSQ Length = 274 Score = 77.5 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 19/153 (12%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTN-LWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 ++L GN+GS+ R G T L L ++ + GA ++ Sbjct: 130 VILDRVQDAGNVGSILRTAAAAGFTQVLALSGCAHLWSNKVLRAGMGAHRLLD------- 182 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN---TPVALVFGRERVGLTN 122 L E + ++ +A P+L + N PVA V G E G++ Sbjct: 183 LYEGWSNQQVLSAVTA-------PLLAATADAKCDLFSLKNDLLHPVAWVMGSEGQGVSE 235 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 + L + ++I +P SLN++ A + +E Sbjct: 236 DLLAQA-KGISIPIDPRVESLNVSTAAAICLFE 267 >UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7Q7_9FIRM Length = 244 Score = 77.5 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 13/153 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 I+L + GN+G++ R+ + G + L S + + + + + ++ T Sbjct: 104 ILLDDVQDPGNVGTILRSAYSFGFDTVVLSKHCADVYSDKVIRSTQGA--LFHMQVIRT- 160 Query: 67 DEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 S ++ + + P++ E A VAL+FG E G++ E L Sbjct: 161 -----DLSQII---DQLKEKKIPVIGTALENASAMSTIEAVDRVALLFGNEGNGVSKELL 212 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 KC + I + + SLN+A+A + Y+ R Sbjct: 213 AKCDETMYIEMH-AFESLNVAVAAGIAMYKFRR 244 >UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7H0_9CAUL Length = 272 Score = 77.1 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 12/149 (8%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 + L + GN+G++ R G + L+ V P S A S + D Sbjct: 129 VALEQVRDPGNLGTIIRTADAAGCGGVILIGDCVDPYSVEAVRATMGSVFAVSITRTD-- 186 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPR-ECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 EA A +T P ++ R + + + P ++ G E+ GLT++ Sbjct: 187 PEAFL---------AWRKTWPGSVVGTRLDATVSHRSAVMQKPSLILMGNEQAGLTDQLA 237 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 C +V I SLNLA+A ++ Y Sbjct: 238 AACDVNVKIPMRGRADSLNLAIATGIMVY 266 >UniRef50_B2SHA4 rRNA methyltransferase n=17 Tax=Bacteria RepID=B2SHA4_FRATM Length = 250 Score = 77.1 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 13/154 (8%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + +VL GN+G++ R +GL + L+N V P + +AI GA + Sbjct: 102 DDFILVLDRIQDPGNIGTILRTAIAVGLKEVILINGTVDPFNPKAIRAGMGAQFSL-KFG 160 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + L E A+ + + P + E LVFG E G+ Sbjct: 161 YITNLAELKNI--------AKLQQRKIWLTTPHQGVSCYAKEFKLANSILVFGEEANGIE 212 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 + + + I + SLN+A A + +E Sbjct: 213 DFSVGQKTM---IPTLSDIESLNVAQAATIYLFE 243 >UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (class) RepID=Q6AGD8_LEIXX Length = 277 Score = 76.7 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 6/153 (3%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67 +L E GN G++ RA + G + L V + + + S + L Sbjct: 127 ILEEVRDPGNAGTIIRAADSAGADAVVLTGRTVDLYNPKVVRSTTGSLFHIPVAVGADLP 186 Query: 68 EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 E ++ +A R L + ++ + A P A VFG E GL +E L Sbjct: 187 EVVS-----CARAAGLRVLAADIAGEDLLAARTAGQLAR-PTAWVFGNEARGLPDEWLGL 240 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 VA+ S+NLA A V YE A Sbjct: 241 VDRAVAVPIYGRAESMNLATAASVCLYESAFAQ 273 >UniRef50_Q0IAI9 Predicted rRNA methylase n=25 Tax=Cyanobacteria RepID=Q0IAI9_SYNS3 Length = 176 Score = 76.7 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 30/165 (18%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA--H 61 +R+ L E N G++AR GL L L+ PL + + + A D + Sbjct: 20 LRVALFEPRIPPNTGNIARTCAAFGLP-LDLIEPLGFSLEDRYLKRA--GLDYWPHVDLT 76 Query: 62 IVDTLD---EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 I +D E+LA S V+G S R L M E V L+FGRE Sbjct: 77 IHKDVDAFFESLAQPSRVIGCSRRGGILLRNM------------EFQKGDV-LLFGREDT 123 Query: 119 GLTNEELQKCHYHVAI--AAN------PEYSSLNLAMAVQVIAYE 155 GL +CH I + SLNL++A +++++ Sbjct: 124 GLPETIRSRCHQITTISMPCSAGEDGQGGVRSLNLSVACAIVSHQ 168 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 76.7 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 12/157 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI--ALAAGASDVIGNAHI 62 + ++L + + N+G++ R G L + P Q + AAGA D + A + Sbjct: 166 VLVMLDQVTDPQNIGAILRTCAAFGAAGLIM-QDRHSPVMQGVLAKTAAGAMDRVPFARV 224 Query: 63 VDTLDEALAGCS----LVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + L AL + + +G + + +L+ + + + +V G E Sbjct: 225 TN-LSRALESLTENGFVSLGMAGEAEHSLQAVLEQQG----WRQAGSPRALVIVMGSEGE 279 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 GL + C + V I + SLN++ A + YE Sbjct: 280 GLRRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYE 316 >UniRef50_A9M3B4 tRNA/rRNA methyltransferase n=58 Tax=Proteobacteria RepID=A9M3B4_NEIM0 Length = 157 Score = 76.3 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59 M+ IVL + N G++ R G +L LV PL P DS + A + Sbjct: 1 MIFMFTIVLYQPEIPPNTGNIIRLCANTG-ADLHLVKPLGFPLDSAKMKRAGLDYHEFAS 59 Query: 60 AHIVDTLDE---ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 + + D+ ALAG + T+ P E + V L+FG E Sbjct: 60 LTVYENFDDCLKALAGRRIFALTT-------KGTARPDETAFQ------KGDV-LLFGPE 105 Query: 117 RVGLTNEELQK--CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 GL + L + + P S+NL+ V VI +E Sbjct: 106 TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQH 151 >UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fusobacteriaceae RepID=D1AKE9_SEBTE Length = 256 Score = 76.3 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 17/155 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 ++L + GN+G++ R M+ G NL L V + A + + I +T Sbjct: 109 VILDDVQDPGNIGTIIRTMEASGFKNLILTKGSVDVYNPKTVRATMGG-IFKSNIIYETP 167 Query: 67 D---EALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + E L + V+ T L +D R+ LK A +FG E G+++ Sbjct: 168 ERITEFLKDNNYQVIST-----LLDKNSIDYRDVELK-------EKNAYIFGNEGHGISD 215 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 ++ I + SLN+++A + Y++R Sbjct: 216 IFIESTDIKAIIPIYGDVDSLNVSVASGIFLYKMR 250 >UniRef50_C2BWX1 TrmH family rRNA methyltransferase n=3 Tax=Mobiluncus RepID=C2BWX1_9ACTO Length = 275 Score = 76.3 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 13/154 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + ++L T GN+G++ R G + +++ S + A+ S Sbjct: 123 LALILPATQDPGNVGTLIRLADACGASTVFMGQDCADATSPKVIRASVGSVFHVPTPRFQ 182 Query: 65 TLDEALAGCS----LVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L + +VGTS ML P G S N VA V G E GL Sbjct: 183 DLAAVVKALRSEGWTIVGTS----LSGDVMLTPVTAGTWS-----NKKVAWVMGNEAHGL 233 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 E C V+I SLN+ A + + Sbjct: 234 DATEESWCDVLVSIPMFGRAESLNVTSAATLCLW 267 >UniRef50_C0YVQ1 Possible TrmH family rRNA methyltransferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ1_9FLAO Length = 255 Score = 76.3 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 17/154 (11%) Query: 6 RIVLVE-TSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIG--NAH 61 +++VE GN+G++ R+ + G+ L + + + I + G + A Sbjct: 108 TVIIVEGVEKPGNLGAILRSCEAFGIDALIVADGKTDFYNPNVIRSSVGCLFGMEVYQAE 167 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +TL E L S + T+ E A++FG E GL+ Sbjct: 168 NKETL-EFLQKNSFNIYTT-----------LMDESAEDLYKRDFRQRSAVLFGTEHSGLS 215 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 + + K + I SLNL+ AV + YE Sbjct: 216 DFWIGKGKNTL-IPMAGSIDSLNLSNAVAITCYE 248 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 76.3 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 21/161 (13%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAH 61 + I++ + N+G++ R + G + L P S + +AAGA + A Sbjct: 218 VLIIIDSITDPHNLGAIIRTAEAFGAQGMVL--PQRRVAGITSTVMKVAAGALEHFPVAR 275 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L+ + GT A +T P+ LV G E Sbjct: 276 VVNLSRALETLKESGFWIYGTVAGKQT-------------ALHQADLREPMGLVIGSEGE 322 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 GL+ + C + + I + SLN ++A + YE+ Sbjct: 323 GLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQ 363 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 18/162 (11%) Query: 2 LQNIR------IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS 54 L +IR +VL N+G++ R + G+ + + ++ GA Sbjct: 140 LADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAI 199 Query: 55 DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFG 114 I +V L AL + R W + G + VALV G Sbjct: 200 FSIP-CIMVTNLAAALKDL--------KQRGF-W-VYAADANGDSCFEQEFGGSVALVLG 248 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E G++ L + Y V+I ++ SLN+++A ++ YE+ Sbjct: 249 NEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEI 290 >UniRef50_Q2RHA9 RNA methyltransferase TrmH, group 2 n=2 Tax=Bacteria RepID=Q2RHA9_MOOTA Length = 155 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63 + +VL + N G++AR G T L L++PL D + + A D +I+ Sbjct: 3 LHVVLYQPEIPQNTGNIARTCALTG-TFLHLIHPLGFRLDEKHLKRA--GLDYWEEVNIL 59 Query: 64 DT-----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + EA + ++ R P + LVFG E Sbjct: 60 EHSTWAAFREAYPDANCYYLSTKGQRRYTKVDYRPDDF--------------LVFGPETR 105 Query: 119 GLTNEELQKC-HYHVAIAANPEYSSLNLAMAVQVIAYE 155 GL L+ + + P SLNLA +V ++ YE Sbjct: 106 GLPASILEPAGDRVLRVPMRPGLRSLNLANSVAIVLYE 143 >UniRef50_C6P4R4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P4R4_9PROT Length = 186 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 60/174 (34%), Gaps = 25/174 (14%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65 ++L + N G+V R G +L L+ PL D + + A + + DT Sbjct: 4 VILYQPEIPPNTGNVIRLCANTG-AHLHLIRPLGFDLDDKNLRRAGLDYHEYASVRVYDT 62 Query: 66 LDEALAGCSLVVGTSARSRTLPWP-----MLDPRECGLKSVAEAANTPV----------- 109 L E L L +A P P + RE A A T Sbjct: 63 LVECLDTLPLA---TALPHPNPPPGGEGTSVSLRELADTRRAFAFTTKGSHPFNEVRYQP 119 Query: 110 --ALVFGRERVGLTNEELQKC--HYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 A +FG E GL E L + + P+ SLNL+ V V YE Sbjct: 120 GDAFLFGPESRGLPAEVLAAFVPERRLRLPMLPDNRSLNLSNTVAVTVYEAWRQ 173 >UniRef50_C7RTK9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTK9_9PROT Length = 272 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 49/167 (29%), Gaps = 16/167 (9%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD--SQAIALAAGASDVIGNAHIV 63 +VL GN+GS+ R+ G L++P + + A GA + Sbjct: 118 TVVLDGVQDPGNVGSILRSAAAAGFRQ-ILLSPDCAQAWAPKTLRAAMGAHFQLDVLEHC 176 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L L+ P+ PVA VFG E +G+ Sbjct: 177 D-LPAFLSA------------YRGQPVATLLGASTSLYGADLAGPVAWVFGSEGLGVRPA 223 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV 170 V I SLN+A A V +E Sbjct: 224 VAALTRLQVRIPMPGPSESLNVAAAAAVCLFETVRRRQTEASPSRVA 270 >UniRef50_Q4DUL2 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DUL2_TRYCR Length = 392 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 17/184 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK--------PDSQAIALAAGASD 55 + + + N+G + RA+ G + L + D+QA ++ Sbjct: 169 RVFVAVENPKTPANLGGILRAIGCFGYSGLIFSGTRLLAALKHRPVTDTQAAGFSSPYVA 228 Query: 56 VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECGLKSVAEAANTP-----V 109 + ++ + L+ A + ++VV P P+ P L A + V Sbjct: 229 IPDITNLFEVLEGATSFEAVVVAVDMIDGATPLPLYRHPCLHALDGGARKRSRCTLPNLV 288 Query: 110 ALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169 +FG E + E L +CH V + SLNLA AV V+ Y+ A + + Sbjct: 289 VYLFGPEDGSIRQEVLARCHSAVFLPT---QGSLNLAAAVNVVLYDRCAAQWRLTASDDD 345 Query: 170 VEHE 173 V + Sbjct: 346 VTAK 349 >UniRef50_D1YDL1 RNA methyltransferase, TrmH family n=2 Tax=Propionibacterium acnes RepID=D1YDL1_PROAC Length = 271 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 14/155 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGN 59 + ++ + GN G+V R G + L V P + ++ S V+ Sbjct: 119 RLAVICAQVRDPGNAGTVIRCADAFGADCVILTRGSVDPHNPKTVRSSVGSIFHLPVVVG 178 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 + D ++ A V+ A ++ + + P+A + G E G Sbjct: 179 VELADAVEWAHQHQMSVLA--ADGGGHSLDVV--------ARSGCLKRPIAWLMGNEAWG 228 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154 L + V + SLNL+ A V+ Y Sbjct: 229 LPEADRALADEIVGVPMWGAAESLNLSTAAAVVLY 263 >UniRef50_Q9SUL3 OBP33pep like protein n=16 Tax=Viridiplantae RepID=Q9SUL3_ARATH Length = 278 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 31/161 (19%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 +V+ + N+G++AR+ G+T L LV A AS + + Sbjct: 7 YVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDF---NAFGSHGSASHI--RFRHFHS 61 Query: 66 LDEAL------AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 L EA C + G ++ + A + G E G Sbjct: 62 LIEARNYLKEEKDCD-ICG------------VEIADGASAVNEHPFKRNTAFLLGNEGSG 108 Query: 120 LTNEELQKCHYHVAIAANPEYS----SLNLAMAVQVIAYEV 156 L+ +E + C + V I +Y SLN+ +A ++ + Sbjct: 109 LSAKEYEICDFFVYIP---QYGCGTASLNVTVAASIVLHHF 146 >UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRI6_9FIRM Length = 262 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 12/153 (7%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHIVDT 65 I+L GN+G++ R+ + + L + + A G+ + + DT Sbjct: 118 IILENLQDMGNIGTIIRSCDAFSIDGVILAGDCADVFAPKTVRSAMGSLFRLP-IYCCDT 176 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 +EA+ T + + + ++ E A+V G E G+++ Sbjct: 177 -EEAI--------TLLQKGGFTVYSAELSDRSVRLGEEKLPQKTAVVIGNEGNGVSDTVK 227 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 + C + I + SLN ++A VIA+E+ Sbjct: 228 KLCDKSLFIPISSA-ESLNASVAASVIAWEMSK 259 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 75.9 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 12/152 (7%) Query: 9 LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDTLD 67 L N+G+ R + G + L V A+ +AGA I A + + Sbjct: 82 LDNVVDQRNIGACIRTAEFFGAAGVVLPKRRVGSIQEGAVKASAGAVFHIPIARV-ENFA 140 Query: 68 EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 A+ + T+ L G A + P A+V G E G++ ++ Sbjct: 141 SAIKKLKKLGFTT----------LAADLDGEDLEAVSLLLPAAVVIGGEDRGVSRPVKKQ 190 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 C + V I + +SLNL++A + Y + Sbjct: 191 CDFVVKIPGVGKVNSLNLSVAAGIFLYTLSRQ 222 >UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synechococcus RepID=Q2JVF6_SYNJA Length = 270 Score = 75.6 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 9/155 (5%) Query: 10 VET-SHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68 VET GN+GS+ R + G LWL V P++ + A+ ++ L Sbjct: 119 VETLQDPGNLGSLIRVVAATGADGLWLSADSVDPENPKVLRASAGQWFRRPPQVLSDLPA 178 Query: 69 ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128 + C R + + P + G E GL +Q Sbjct: 179 WIQSC--------RRQGIQVLAATLAPLATCYWDHDLTRPTLFLLGNEGAGLQESTIQLA 230 Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 V I SLN+AM ++ YE A Sbjct: 231 DAQVRIPMAAGVESLNVAMTGGLLLYEALRQQRAQ 265 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 75.6 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 17/156 (10%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS--DV-IGNAHI 62 +VL GN+G++ R G + L ++ + + + I + Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISRTEL 160 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + L+E V+GT + + +A+V G E G+ Sbjct: 161 IPALNELKELGVTVIGT-------------ALQGAQPLSELPVSENIAVVLGNEGQGIRP 207 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L C I + + SLN+A+A + Y R Sbjct: 208 ATLDICDQRALIEMS-SFESLNVAVAAGICLYRYRR 242 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 296 6e-79 UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ... 286 6e-76 UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ... 280 4e-74 UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 278 1e-73 UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil... 278 2e-73 UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ... 278 2e-73 UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter... 272 6e-72 UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G... 272 9e-72 UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ... 268 2e-70 UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ... 266 4e-70 UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ... 261 2e-68 UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro... 258 2e-67 UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ... 255 1e-66 UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith... 254 1e-66 UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac... 254 2e-66 UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM... 252 7e-66 UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ... 251 1e-65 UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ... 251 1e-65 UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ... 251 2e-65 UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ... 249 4e-65 UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick... 249 8e-65 UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro... 249 9e-65 UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ... 248 1e-64 UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ... 248 1e-64 UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ... 247 3e-64 UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a... 246 4e-64 UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella... 246 6e-64 UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ... 245 8e-64 UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ... 244 2e-63 UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ... 244 2e-63 UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03... 243 3e-63 UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami... 243 3e-63 UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34... 242 7e-63 UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ... 241 1e-62 UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ... 241 2e-62 UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30... 241 2e-62 UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo... 240 3e-62 UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ... 240 3e-62 UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte... 238 1e-61 UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera... 238 1e-61 UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI... 238 2e-61 UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ... 236 4e-61 UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ... 235 9e-61 UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ... 234 2e-60 UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68... 234 2e-60 UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur... 233 3e-60 UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ... 231 2e-59 UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 228 1e-58 UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur... 228 1e-58 UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ... 228 2e-58 UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales... 228 2e-58 UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11... 228 2e-58 UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 227 2e-58 UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ... 227 2e-58 UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo... 227 2e-58 UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ... 227 2e-58 UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25... 227 3e-58 UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or... 225 9e-58 UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp... 224 3e-57 UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group... 223 4e-57 UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma... 223 6e-57 UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne... 221 1e-56 UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re... 221 2e-56 UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ... 221 2e-56 UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N... 221 2e-56 UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ... 220 4e-56 UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7... 219 5e-56 UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ... 219 9e-56 UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ... 219 9e-56 UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ... 218 2e-55 UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq... 218 2e-55 UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ... 218 2e-55 UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ... 217 2e-55 UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s... 216 5e-55 UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad... 216 7e-55 UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ... 216 7e-55 UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula... 216 8e-55 UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod... 215 1e-54 UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph... 215 1e-54 UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re... 215 1e-54 UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria... 214 1e-54 UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ... 213 4e-54 UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ... 212 7e-54 UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ... 212 9e-54 UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 212 1e-53 UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L... 211 1e-53 UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein... 211 2e-53 UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or... 211 2e-53 UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur... 210 3e-53 UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma... 210 4e-53 UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ... 208 1e-52 UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ... 207 2e-52 UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne... 205 1e-51 UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ... 204 3e-51 UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc... 203 4e-51 UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14... 203 4e-51 UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob... 202 6e-51 UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc... 202 1e-50 UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ... 202 1e-50 UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc... 201 1e-50 UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402... 200 3e-50 UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc... 200 3e-50 UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho... 199 1e-49 UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep... 197 2e-49 UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo... 196 4e-49 UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ... 196 5e-49 UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe... 196 5e-49 UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte... 195 1e-48 UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido... 194 3e-48 UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ... 194 3e-48 UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ... 193 4e-48 UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 193 4e-48 UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido... 193 5e-48 UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha... 191 1e-47 UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat... 191 3e-47 UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor... 190 4e-47 UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto... 189 7e-47 UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar... 189 8e-47 UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=... 188 2e-46 UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 188 2e-46 UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ... 186 6e-46 UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc... 185 1e-45 UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT... 184 2e-45 UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra... 184 2e-45 UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ... 184 3e-45 UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI... 183 4e-45 UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS... 182 7e-45 UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM... 182 7e-45 UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo... 178 1e-43 UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam... 176 5e-43 UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ... 175 1e-42 UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus... 172 1e-41 UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter... 171 2e-41 UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto... 170 3e-41 UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12... 170 5e-41 UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10... 169 6e-41 UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ... 169 8e-41 UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT... 169 8e-41 UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi... 168 1e-40 UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 167 3e-40 UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ... 167 4e-40 UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot... 166 6e-40 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 162 7e-39 UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 162 1e-38 UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta... 161 2e-38 UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ... 161 2e-38 UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD... 160 4e-38 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 160 5e-38 UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 159 5e-38 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 159 8e-38 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 159 9e-38 UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ... 159 1e-37 UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ... 158 1e-37 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 158 2e-37 UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 157 3e-37 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 157 4e-37 UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ... 156 5e-37 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 156 5e-37 UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic... 156 5e-37 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 156 6e-37 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 155 8e-37 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 154 2e-36 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 154 2e-36 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 154 2e-36 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 154 2e-36 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 154 2e-36 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 154 2e-36 UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 154 3e-36 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 154 3e-36 UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr... 154 3e-36 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 154 3e-36 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 154 3e-36 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 153 4e-36 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 153 6e-36 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 152 7e-36 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 152 1e-35 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 152 1e-35 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 151 1e-35 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 151 1e-35 UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon... 151 2e-35 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 151 2e-35 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 150 4e-35 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 150 4e-35 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 150 5e-35 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 150 5e-35 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 149 7e-35 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 149 9e-35 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 149 1e-34 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 149 1e-34 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 149 1e-34 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 148 1e-34 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 148 2e-34 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 148 2e-34 UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill... 148 2e-34 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 147 2e-34 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 147 2e-34 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 147 3e-34 UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano... 147 3e-34 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 146 5e-34 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 146 5e-34 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 146 6e-34 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 146 7e-34 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 146 7e-34 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 146 7e-34 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 145 9e-34 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 145 1e-33 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 145 1e-33 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 145 1e-33 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 145 1e-33 UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 145 1e-33 UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neiss... 145 1e-33 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 144 2e-33 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 144 2e-33 UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacill... 144 3e-33 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 144 3e-33 UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hypho... 144 3e-33 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 144 3e-33 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 144 3e-33 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 144 3e-33 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 144 3e-33 UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1... 144 3e-33 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 144 4e-33 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 143 5e-33 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 143 5e-33 UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot... 143 6e-33 UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell... 143 6e-33 UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph... 143 6e-33 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 143 6e-33 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 142 7e-33 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 142 1e-32 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 142 1e-32 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 141 2e-32 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 141 2e-32 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 141 2e-32 Sequences not found previously or not previously below threshold: UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 154 3e-36 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 149 6e-35 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 148 1e-34 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 148 1e-34 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 148 2e-34 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 148 2e-34 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 146 5e-34 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 145 1e-33 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 145 1e-33 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 145 1e-33 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 145 2e-33 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 142 9e-33 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 142 1e-32 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 142 1e-32 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 141 2e-32 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 141 2e-32 >UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189 Tax=Proteobacteria RepID=TRMJ_ECOL5 Length = 246 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 245/246 (99%), Positives = 246/246 (100%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA Sbjct: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL Sbjct: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 Query: 241 KGNKAE 246 KGNKAE Sbjct: 241 KGNKAE 246 >UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 Tax=Gammaproteobacteria RepID=B3PDK4_CELJU Length = 286 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 137/240 (57%), Positives = 165/240 (68%), Gaps = 1/240 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 NIRIVLV TSH GN+G ARAMK MGL L+LV P P +A+ AAGA+DV+ NA Sbjct: 9 FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG AEA VA+VFGRE GLT Sbjct: 69 VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV-EHEETPYPLV 180 NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L E H + P Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE +Y HLEQ L+ GF+ ++P Q M +LRRL+ R R + ELNILRG+L +++ Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQNYV 248 >UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Gammaproteobacteria RepID=Q080P3_SHEFN Length = 240 Score = 280 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 158/244 (64%), Positives = 186/244 (76%), Gaps = 4/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L P +PD Q+IALAAGASD++ N Sbjct: 1 MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK E+ N PVA+VFGRE GL Sbjct: 61 TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA E + YPL Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTD----EYPLT 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LERF+ HLE TL TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++ Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKKM 236 Query: 241 KGNK 244 Sbjct: 237 DKQD 240 >UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57 Tax=Gammaproteobacteria RepID=TRMJ_YERPA Length = 257 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A Sbjct: 1 MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S EA + PVALVFGRERVGL Sbjct: 61 TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-NGEQVEHEETPYPL 179 TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L Q+ N E EE PYPL Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 VDDLERFY HLEQ L +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240 Query: 240 NK 241 +K Sbjct: 241 DK 242 >UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2 Tax=Alteromonadales RepID=Q3IFI1_PSEHT Length = 241 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 155/242 (64%), Positives = 186/242 (76%), Gaps = 2/242 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P + DS A ALAAGASDV+GNA Sbjct: 2 ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE GL Sbjct: 62 VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L Q + E ++T YP Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E FYGHLE+TL TGFI + HPG VM KLRR+F RARPE E+NILRGIL SI + Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINKSI 239 Query: 241 KG 242 Sbjct: 240 PK 241 >UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70 Tax=Gammaproteobacteria RepID=TRMJ_PHOLL Length = 241 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 178/242 (73%), Positives = 210/242 (86%), Gaps = 1/242 (0%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A Sbjct: 1 MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A + VA+VFGRERVGL Sbjct: 61 TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEELQKCHYH+ I NPEY SLNLAMAVQ+++YE+RMA+LA Q+ EQ + +E YPL Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DD+ERFY HLE L +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+ Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239 Query: 241 KG 242 K Sbjct: 240 KK 241 >UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria RepID=Q5ZUP6_LEGPH Length = 257 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 123/245 (50%), Positives = 166/245 (67%), Gaps = 3/245 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP PD +A +AAGA DV+ A Sbjct: 3 LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + +TLDEAL GC L++GTSAR R L P L P C ++ NT VA+VFGRE GLT Sbjct: 63 VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM L+ QV D Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 ++E+FY HL++ + F++ ++P ++M ++RRLF R E E++ILRG+L+ +++ + Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239 Query: 242 GNKAE 246 + + Sbjct: 240 WARKD 244 >UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT Length = 249 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 3/242 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L ++IVLV T+H GN+G+ ARAMK MG L LV P P A + A D++ A Sbjct: 11 LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I +TL++A+A C LV+GTSAR R +PWP+L+P+E V VALVFGRE GL Sbjct: 71 EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL C++HV I +P+YSSLNLA AVQ++ YE+R+A L+ E+ + + Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKN---YWDVELANT 187 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E H+++ + F ++P +++ ++RR F R+ + E NI RG+ A+I+++ Sbjct: 188 QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQKKL 247 Query: 241 KG 242 K Sbjct: 248 KQ 249 >UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCC9_KANKD Length = 277 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 116/260 (44%), Positives = 160/260 (61%), Gaps = 18/260 (6%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P P +A+ ++GA DV+ NA Sbjct: 15 LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VDT++EALA C L++GTS+R+R LPWP+++PRE G PVA++FGRE GL Sbjct: 75 QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEARPVAIMFGRESTGL 134 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------------------ 162 NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A Sbjct: 135 LNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAELGY 194 Query: 163 TQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222 + + + E ++++ Y HLE T+ T F P + ++RR+ +AR Sbjct: 195 DAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKARLN 254 Query: 223 SQELNILRGILASIEQQNKG 242 E+NILRG L+SI++ K Sbjct: 255 KGEVNILRGFLSSIDKYIKR 274 >UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7P7_9GAMM Length = 253 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++ A Sbjct: 15 MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D+LDEAL GC SAR R LP P+++PR+ + NT +A+VFGRE GL+ Sbjct: 75 VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++ + G E E D Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQRE--AITND 192 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 DL Y H E++L GF+ +P +M +++RLF RA + EL+I+ GIL + E + K Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252 >UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Gammaproteobacteria RepID=A6VX19_MARMS Length = 260 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 4/241 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P P +A + AAGA D++ NA Sbjct: 1 MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IV TL+EA+A CSLV+GTSAR RT P+++ REC + EA + VA+VFGRE GL Sbjct: 61 TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N+E+ +CH V I AN EY LN++ AVQ++ YE+ MA +N E + E YP Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEIWMA----NQNKENYKKETPEYPHK 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D++ FY HLE+TL FI +HPG+V++KL R F R+RPE QEL ILRG+LA+++++ Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQREA 236 Query: 241 K 241 Sbjct: 237 G 237 >UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria RepID=Q2YB91_NITMU Length = 267 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 115/244 (47%), Positives = 149/244 (61%), Gaps = 4/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L +RIVL TSH GN+G ARAMKTMGL +L+LVNP PD +A A GA D++ A Sbjct: 24 LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + DTLDEAL+G L +AR R L + D R+ K + A VALVFG E GL Sbjct: 84 KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----HEETP 176 T E+ KC + I ANPEYSSLNLA AVQV+AYE+RMA E H Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D++E Y HLEQ +++GF+ P ++M ++RRLF RAR E +E+NILRGIL++ Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263 Query: 237 EQQN 240 E++ Sbjct: 264 EKRM 267 >UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5 Length = 256 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 116/245 (47%), Positives = 151/245 (61%), Gaps = 1/245 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P PD +A ALA+GA D++ +A Sbjct: 6 LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + LD AL GC V GTSAR R + WP + RE + +A+ AL+FGRER GLT Sbjct: 66 VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-YPLV 180 N E+ +C V I EY SLNL AVQV+AYE+ MA L Q + + + Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAALTAQPAQDVPAEDVPEQPAPI 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +D+E FYGHL+ L +GF++E ++M +LRRLF RARP E+NILRGIL IE+ Sbjct: 186 EDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIERWA 245 Query: 241 KGNKA 245 Sbjct: 246 SKVDR 250 >UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVG4_9GAMM Length = 263 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 115/246 (46%), Positives = 149/246 (60%), Gaps = 3/246 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + ++RIVLVETSH GN+GS ARAMK MGL L LV P PD+QA ALA+GA D++ A Sbjct: 17 LAPDLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERA 76 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + D L ALA C V GT+AR R + WP L R + VA A+ PVA++FG ERVGL Sbjct: 77 EVYDDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGL 136 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N EL C + I Y SLNLA AVQ++AYE+ +A T+ V P Sbjct: 137 SNRELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRA-- 194 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +E FYGHL Q L GF++ +M +LRRLF RARP+ E+ ILRGIL +E+ Sbjct: 195 -AMEGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWA 253 Query: 241 KGNKAE 246 + +K + Sbjct: 254 QMDKGD 259 >UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum RepID=Q7NRY2_CHRVO Length = 244 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +QNIR+VL +H GN+GS ARAMKTMGL+ L+LV P V P +A ALA+GA D++ NA Sbjct: 1 MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 +V +L EAL+ ++ ++R R L P+ PR+ + +A A + VALVFG E GL Sbjct: 61 VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + EE+++C+ V I NP+Y SLNLAMAVQV+ YE+ E E Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYELFSHTGVDVE----YLRAEGEAATQ 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +++ GHLEQ + G+ + + ++M ++R +F RA +E++ILRG +++ Sbjct: 177 SEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQRTA 236 Query: 241 KGNKAE 246 G + Sbjct: 237 SGRSGD 242 >UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKR3_DESAH Length = 247 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 5/244 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61 Q I +VLVE N+GSV RAM G + L LVNP ++ A +A A ++ A Sbjct: 4 QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VDTL +AL C L GT+ R L P + G E ALV GRE GL Sbjct: 64 VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EL+ C V I Y S+NL+ A ++ Y+ MA T + TP Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +L Y H+ ++L F+ +P ++ RR+F RA + +E+ I+RG++ I+ Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRIDWTES 239 Query: 242 GNKA 245 K Sbjct: 240 ERKK 243 >UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus RepID=Q2JI62_SYNJB Length = 276 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 7/248 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60 L +R+VLV+ + N+G++AR MK MG LV+P P +AI A +D++ A Sbjct: 12 LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118 V TL EAL GC V GT+ RS+T P W + PR+ +A VFG E Sbjct: 72 RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAAL---VFGPEDR 128 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NEEL CH + I + Y SLNLA AV + YE+ + + Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELY-TLVCQSPSPAPPMPSPQRLA 187 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + LE F+ HLE LL G++ + + M K R LF RA E+ +LRGIL ++ Sbjct: 188 PFELLEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQLQW 247 Query: 239 QNKGNKAE 246 ++ E Sbjct: 248 SQGCSRQE 255 >UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VS87_ALCBS Length = 261 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 114/260 (43%), Positives = 169/260 (65%), Gaps = 15/260 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P P +A A A+GA DV+ A Sbjct: 1 MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL----KSVAEAANTPVALVFGRE 116 + +++DEAL G +LV+GTSAR R +PWP L PR+ +T +A++FGRE Sbjct: 61 QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH---- 172 GLTN+EL++C+ HV++ ANPEY LN+A AVQ+I+YE+R+A L ++ Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180 Query: 173 -------EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225 + P + + F HLE+ + +GF+ PGQVM ++RRLF RARP+ E Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240 Query: 226 LNILRGILASIEQQNKGNKA 245 ++ILRG+L ++E++ + ++ Sbjct: 241 MSILRGVLVALEKKMQRDEG 260 >UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Desulfuromonadales RepID=Q3A4B2_PELCD Length = 244 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 5/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60 +I +VLVE N+GSV RAM G ++L LVNP+ A +A AS ++ A Sbjct: 3 FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L ALA C+L GT+ R L P + + + VA VFGRE GL Sbjct: 63 RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 EL C V I + S+NLA +V + YE +A G+ + T + Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSR--VAAIACGKTAGRKST--SSI 178 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE Y H+ TL GF+ +P ++ RR+F RA +E+ ILRG+ + ++ N Sbjct: 179 ATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWLN 238 Query: 241 KGNKAE 246 + E Sbjct: 239 GQRREE 244 >UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1W4_9NEIS Length = 254 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+NIR+VL SH GN+GS ARAMKTMGL+ L+LV P P +A LA+GA D++ +A Sbjct: 9 FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 +V+TL EAL+ ++ ++R R L P+ PR+ + VA A + VALVFG E G Sbjct: 69 VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ +E+++C+ V I NPEY SLNLAMAVQV+ YE+ E Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYELFSHTGVD----VDYLRAEAESAT 184 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++E F GHL+QTL G+ + ++M +LR LF RA +E++ILRG L +++ Sbjct: 185 RDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQRV 244 Query: 240 NKGNKA 245 + Sbjct: 245 AHRDDG 250 >UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli RepID=A8PK88_9COXI Length = 239 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 5/238 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIVLV+T+ GN+G+ ARAMKTMGL L+LV P P A A+ A D++ +A Sbjct: 3 LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VD L+EAL C LV GTS R R W L PR K + +A++FG+ER GLT Sbjct: 63 VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEKIMNHC-QQKIAILFGQERCGLT 121 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L + ++ P V Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFLQE----KNIKKRTVPLADVK 177 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + FYG L++ L F++ N VM+KLRR+F+RA +S E+ IL+GI +++E++ Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235 >UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVJ6_CHRSD Length = 246 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 119/245 (48%), Positives = 162/245 (66%), Gaps = 3/245 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML NIRIVLV+T H GN+G ARAMKTMGL++L LVNP PD++A LAAGA+DVI NA Sbjct: 1 MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119 +V+ + +A+ C VVG SAR R+LP P DP + + A + PVALVFGRER G Sbjct: 61 RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LTN+E++ C + V+I ANPEY LNLA AVQ++AYEVR AW Q + + + P Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPATSQTPPS-LPT 179 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D + F HL + L+ +GF+ + H + + LR LF RA+P +EL+ILRG+L+++E+ Sbjct: 180 RDQMAHFEAHLHEALVTSGFLTQPHA-RTEDHLRALFARAQPSRKELSILRGVLSTLEKA 238 Query: 240 NKGNK 244 + Sbjct: 239 GSNPR 243 >UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXZ7_HALHL Length = 249 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 107/244 (43%), Positives = 147/244 (60%), Gaps = 4/244 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L+ RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P P D +A+A AAGA DV+ A Sbjct: 3 LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L AL GC L G SARSR P L+ R +VA+ + +A VFGRER GL Sbjct: 63 RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL CHY V I +P+YSSLN+A +VQ++A+E+RMA G E P V Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMA---AAAGGPVQGQAEEPPAAV 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D LERF+ HLE+ G++ ++P M +LR +F RA E+ +LRG+++ + Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHVLNPR 239 Query: 241 KGNK 244 + + Sbjct: 240 RWRE 243 >UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae RepID=C9R390_AGGAD Length = 241 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P D QAIALAAGA DV+ +A Sbjct: 1 MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++ +A+A CSLV+GTSAR R L +++PRECG K+VA A N VA+VFGRERVGL Sbjct: 61 VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYP 178 TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L + + + YP Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +++LE F+ H EQ + GFI+ VM +LRRL+ RA E ELNIL G+L+++E+ Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQ---GVMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237 Query: 239 QNK 241 + K Sbjct: 238 KLK 240 >UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 Tax=Desulfuromonadales RepID=A1ALQ6_PELPD Length = 251 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 81/246 (32%), Positives = 125/246 (50%), Gaps = 7/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + ++ IV+VE GN+G V RAMK MGL+ L LV + +++ A A D++ A Sbjct: 8 IADSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERA 67 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 + D L ALA C+L VGT+ R +L P + A ALVFGRE G Sbjct: 68 ELYDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQGDCRGALVFGREDSG 127 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LT +EL C +H I + EY SLNL+ AV + YE+ A + ++ Sbjct: 128 LTTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKASDSPGGGRTEI------PAT 181 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 ++E + ++ +L GF+ E +PG +M LRR+ R+ +++EL ILRG+ + ++ Sbjct: 182 SAEMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWA 241 Query: 240 NKGNKA 245 G Sbjct: 242 CSGFDG 247 >UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY86_SYNAS Length = 263 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 126/246 (51%), Gaps = 7/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60 L++I +VL + GN+GS AR K MG+ L +V+ + ++ A+DV+ + Sbjct: 18 LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L EAL+G + +VGT+AR P++ PRE + + + + VAL+FG E GL Sbjct: 78 VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN++L+ CH V+I + + SLNL+ AV ++ YE+ +A Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVAETG------IPVRFTPKMASS 191 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LE YGH+ L GF+ +P M +RRLF+R R +++E+ I+RGI + Sbjct: 192 RELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGICRQLCWYL 251 Query: 241 KGNKAE 246 + Sbjct: 252 HHKTLD 257 >UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2 Length = 249 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 154/244 (63%), Gaps = 3/244 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NIRIVLVE SH+GN+GS ARAM MGLTNLWLVNP D +AIAL+ A++V+ NA Sbjct: 4 LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERV 118 IV L EAL VVGTSAR R + P+ + + + ++ +A++FGRER Sbjct: 64 RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-PY 177 GL NEEL + H I +N Y+SLNLA AVQ++AYE+ + + E E+ Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V +L+ Y H E ++L +GF+ ++ PG VM+K+RRLF R+ ESQE+NILRG L S++ Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243 Query: 238 QQNK 241 + K Sbjct: 244 NKGK 247 >UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Gammaproteobacteria RepID=Q31I12_THICR Length = 268 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 6/245 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L I+IV+VETSH GN+G+VARAMK MGL+ L LVNP P A A A+GA+DV+ +A Sbjct: 11 LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE----CGLKSVAEAANTPVALVFGRER 117 +V+TL++A+A C LVVG SAR R + WP LD R+ E + VA++FGRE Sbjct: 71 VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL+N EL KCHY I NP YSSLN+A AVQV YE+ MA ++ + E Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMAT--DIKSVHEAEGYRHKL 188 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 D +E FY HL Q L F+ + M ++RRLF R++ + +E++ILRG+L + + Sbjct: 189 ASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAAQ 248 Query: 238 QQNKG 242 +Q K Sbjct: 249 RQTKQ 253 >UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRV8_9GAMM Length = 239 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 104/237 (43%), Positives = 143/237 (60%), Gaps = 1/237 (0%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 R+V+V T + N+G+VARAMK MGL +L LV P P A AAGA DV+ N + D+ Sbjct: 2 RVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALADS 61 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124 ++EA+A C VV TSAR R WPM + R+ ++ + VA++ G ER GL ++ Sbjct: 62 VEEAIADCHWVVATSARRRGYEWPMSNARQSMSEAYRRSQEGQQVAILLGPERSGLDSDS 121 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L+ C H I+ANP+Y LN+A A QV+ YE+ A A E E + YP + +E Sbjct: 122 LRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPKHEAVE 181 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 FY HLE L GF+R HPG + KLRRL T+A+ E ELN+LRGIL++IE+ + Sbjct: 182 HFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIERLER 238 >UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVT8_DESBD Length = 248 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 4/247 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59 ML+NI ++L + N+GSVARA MG + LV P +A+ LA A ++ N Sbjct: 1 MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERV 118 I TL EALA S GT+AR+ + P E + + ++ VA+VFG E Sbjct: 61 IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLTNEE C+ + I +SLNL+ AV V+ YE LA + + + Y Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++ E + L +TL+ F+ +++P M L+R F R P E N+L G+ + + Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGLCRQMRR 238 Query: 239 QNKGNKA 245 K Sbjct: 239 IVGIAKN 245 >UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24 Tax=Gammaproteobacteria RepID=Y380_HAEIN Length = 241 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 129/246 (52%), Positives = 172/246 (69%), Gaps = 6/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P D Q+ AL+AGA +++ NA Sbjct: 1 MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPK-SVDEQSYALSAGAENIVKNA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD+ DEA+ CSLV+GTSAR R L +++PREC K A +A+VFGRER+GL Sbjct: 60 RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKV--VAYKGKIAIVFGRERIGL 117 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L + E YP Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D L F+ + E+ + GFI+ VM KL+RL+ RA+ E ELNIL G+L+++E++ Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQ---GVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRI 234 Query: 241 KGNKAE 246 K + Sbjct: 235 DLTKED 240 >UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14 Tax=Acinetobacter RepID=B7H3X7_ACIB3 Length = 279 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 151/263 (57%), Gaps = 18/263 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +RIV+V T+ N+GS RAMKTMGL+ L LV+P P ALAAGA D++ Sbjct: 13 LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 IV+TL+EA+ C LV GTSARSRT+PWP+LD R +++ AA +A+VFGRE GL Sbjct: 73 IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE--------- 171 TNEEL +YH+ I N +Y LN+A A+QV+ YE+RM+ L +E Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192 Query: 172 -HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230 + P +E FY HLE+ L F+ +P + +LRRLF R + + E ++LR Sbjct: 193 MQWDEPLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYHLLR 252 Query: 231 GILASIE-------QQNKGNKAE 246 GI + ++ ++ +K + Sbjct: 253 GIFSRVQALTSGKWKKASSDKED 275 >UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34 Tax=Burkholderiaceae RepID=Q3JQS9_BURP1 Length = 346 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 3/234 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAHI 62 R VLVE SH GN+G+ ARA+KTMG + L LV P V D +A+A+A+GA DV+ +AH+ Sbjct: 66 RFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLASAHV 125 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V TL +AL G + +ARSR P L PR ++ + +ALVFG ER GL+N Sbjct: 126 VPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERTGLSN 185 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 E +++C I ANP YSSLNLA AVQV+AYE+R+A L E+ + D+ Sbjct: 186 EHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLAQSDE 245 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 +ER + HLE L+A F+ +P ++M +LRRLF R E +E+NI+RGI I Sbjct: 246 IERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299 >UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria RepID=A8ZWU6_DESOH Length = 260 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 8/243 (3%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNAHIV 63 I I+LV N+G+ RAMK MGL+ L +V P + + A A DV+ IV Sbjct: 14 ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 A++ S + GT+AR +L P K+V PVA++FG E GL NE Sbjct: 74 GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +LQ CH V I + E+SSLNLA AV VI YE+ A Q +H + +L Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 E Y +++ LLA F+R ++P MN RR +R ++E+ ++RG+ + + Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQVNWYGEKR 246 Query: 244 KAE 246 A+ Sbjct: 247 YAD 249 >UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH12_DESAA Length = 251 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 116/243 (47%), Gaps = 9/243 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60 + I IVL E N+G ARAM MGL L +V P + +A AGA +I + Sbjct: 7 FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +VD L AL + VVGT+AR + + K ++ VALVFGRE GL Sbjct: 67 EVVDDLKTALKEFNWVVGTTARLGSHRK-AMTVENMAAKLISMTGENRVALVFGREDRGL 125 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + E+++ CH V I +SSLNLA AV ++ YE+ A ++ Sbjct: 126 STEDVRLCHQLVNIRTAG-FSSLNLAQAVLLVCYELFKA------GSDKPRESTPKLANK 178 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 DLE Y L + L+ FI +P M+ +RR FTR ++++ I+RGI ++ Sbjct: 179 FDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVDWYT 238 Query: 241 KGN 243 + Sbjct: 239 ERR 241 >UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria RepID=B2SXQ6_BURPP Length = 353 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 103/252 (40%), Positives = 148/252 (58%), Gaps = 13/252 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK---PDSQAIALAAGASDVIGNAHI 62 R VLVE SH GN+G+ ARA+KTMG + L LV+P V D +AIA+A+GA DV+ +AH+ Sbjct: 99 RFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLASAHV 158 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V TL +AL+G + +AR R P PR + +A + +ALVFG ER GL+N Sbjct: 159 VPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERTGLSN 218 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----------H 172 E++++C I ANP YSSLNLA AVQV+AYE+R +L+ + Sbjct: 219 EDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAAGEGE 278 Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 D++E + HLE L+A F+ +P ++M++LRRLF R+ E +E+NI+RGI Sbjct: 279 AVGARAASDEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLEREEVNIVRGI 338 Query: 233 LASIEQQNKGNK 244 I ++K Sbjct: 339 AKHILLKSKSKD 350 >UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae RepID=B0T711_CAUSK Length = 266 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 111/244 (45%), Gaps = 5/244 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNA 60 ++L N+G+VAR M GL +L LV P P +A A+GA+ + NA Sbjct: 5 FPPPCVILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNA 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVG 119 + DTL+EA+A LV T+AR R P++ PRE + E V L+FG ER G Sbjct: 65 KVFDTLEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAG 124 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L +++ C ++I + + SLNLA AV + AYE +M + E P Sbjct: 125 LETDDIALCQAIISIPIDERFRSLNLAQAVSINAYEWKMTV--DDRPWVKFEQNVEPPAD 182 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQ 238 L Y LE+ L GF M LR RAR QE+ RG++ ++ + Sbjct: 183 QSSLLGLYAQLEEQLEEAGFYHPPEKKPSMVRNLRAPLARARLTEQEVRTFRGVVTALSR 242 Query: 239 QNKG 242 Sbjct: 243 GRGR 246 >UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMU6_9PROT Length = 265 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 153/243 (62%), Gaps = 1/243 (0%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L+ IRIVL TSH GN+G+ ARAMKTMG++ L LVNP PD +A+A AAGA D++G A Sbjct: 14 LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + TLD ALA V SAR R L P L R+ + VA A VAL+FG E GL+ Sbjct: 74 VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180 N E+Q+C V I A+P Y+SLNLA AVQ++ YE+R+A A +P + Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFAGSPPVVTRTMPFASPPAVH 193 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 D+ERFY HLE+ ++A+ F+ P +++ KLRRLF R ES E+NILRG+L ++E++ Sbjct: 194 QDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVERKL 253 Query: 241 KGN 243 G Sbjct: 254 AGP 256 >UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBE0_LARHH Length = 268 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 5/242 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 L+N+R+VL S N+GS ARAMKTMGLT L+LVNP PD +A LA+GA DV+ A Sbjct: 19 FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119 + +L EAL G +L ++R R + P+ PR + + A VALVFG E G Sbjct: 79 VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+ EE +C+ V IA NP+Y SLNLA AVQV++YE+ ++ +T Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYELFSQLDFPLDH----LRFQTERAS 194 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++E YGHL+ TL GF + ++M +LR LF RA E QE++ILRGIL +E++ Sbjct: 195 RDEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254 Query: 240 NK 241 Sbjct: 255 TG 256 >UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae RepID=B8H062_CAUCN Length = 263 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 111/240 (46%), Gaps = 5/240 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++L E N+GSVAR M GL++L LV P P +A A A+GA + +A + D Sbjct: 12 CVILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFD 71 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123 TL+ A+A LV T+AR R P+ PRE E A V L+FG ER GL + Sbjct: 72 TLEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETD 131 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ C V+I + + SLNLA AV + AYE +M + E L Sbjct: 132 DIALCQAIVSIPIDERFRSLNLAQAVSINAYEWKMTQ--DDRPWRKFEQNVEEPADQAAL 189 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242 YGHLE L GF M LR RAR QE+ RG++ ++ + Sbjct: 190 LGLYGHLEDELEKAGFYHPPEKKPSMVRNLRAPLARARLSDQEVRTFRGVITALSKGRGR 249 >UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO Length = 282 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 110/249 (44%), Positives = 150/249 (60%), Gaps = 13/249 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L ++RIV+V T+ N+GS RAMKTMGL+ L LV P P ALAAGA+D+I Sbjct: 13 LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVG 119 IV+TL +A+ C LV GTSARSRT+PWP+LD R KS++ VA+VFGRE G Sbjct: 73 IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ---------- 169 LTNEEL +YHV I N +Y LN+A A+QVI YE+RMA LA E+G+ Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192 Query: 170 -VEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228 + P + +E+FY H+E+ L F+ +P + +LRRLF R + + E ++ Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252 Query: 229 LRGILASIE 237 LRGI + ++ Sbjct: 253 LRGIFSRVQ 261 >UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB Length = 256 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 4/236 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 +VL E N+G VARAM GL +L L+NP P +A + ++ A VI A + D+ Sbjct: 16 VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 ++EA+A LV T+ARSR +P P++ P E +SVA+ P +FGRER GL N+E Sbjct: 76 VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + V + +P Y+SLN+A AV V AYE R A ++E P + ++ Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEP-ATQESIQ 194 Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 R + HLE L A GF R + +LR +F +A E+ I+RG+++ E+ Sbjct: 195 RMFDHLESGLDARGFFRPVEKKPVTIRRLRNIFQKADLTDNEVRIMRGVISCFEKY 250 >UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI29_9SYNE Length = 304 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 43/287 (14%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L IRIVLV + N+GSVAR MK GL+ L+LV+P ++A+ +A A DV+ A Sbjct: 15 LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRER 117 IV T+ +ALAGC + T+AR+R P+ P + P+ AL+FG E Sbjct: 75 QIVPTIPKALAGCEYAIATTARTRGFNVPLDPPETALPNLLTSNPQQPIRQTALLFGPED 134 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV------- 170 GL+N+EL + I + YS+LNLA AV + YE+ N Sbjct: 135 RGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIESS 194 Query: 171 --------------------------------EHEETPYPLVDDLERFYGHLEQTLLATG 198 EHE+ P ++++ER+Y HLE LL G Sbjct: 195 LENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQVG 254 Query: 199 FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245 ++ + M K+R+L RA P S E+ +LRG++ IE +K Sbjct: 255 YLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIEWALSHSKQ 301 >UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHT7_SYNFM Length = 257 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 8/246 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS-DVIGNA 60 L+NI IVL E + N+G+ AR+ K MG+ L +VNPL + + +A A+ DV+ Sbjct: 5 LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 I D L ALA VVGT+AR + + +PR+ + V+ + A++FG E GL Sbjct: 65 EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNE+L+ C + V I +++S+NLA AV ++AYE+ A N E+ + Sbjct: 125 TNEQLRFCDFLVTIPTA-DFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +LE Y L TL FI +++P M +RR F+R + E+ I+RGI I+ Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQIDWYC 237 Query: 241 KGNKAE 246 + Sbjct: 238 DRKDED 243 >UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55896_SYNY3 Length = 240 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 124/240 (51%), Gaps = 8/240 (3%) Query: 11 ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEA 69 E N+G++ARAMK MGL L LVNP S +A +A A DV+ A +VD L A Sbjct: 2 EPQGERNVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATA 61 Query: 70 LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCH 129 L ++ TSAR R L PM PR+ +A ALVFGRE GLTNEEL + H Sbjct: 62 LGDRQRIIATSARERILQSPMETPRQALPWLLAPNL--KSALVFGREDSGLTNEELNQAH 119 Query: 130 YHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-----PYPLVDDLE 184 V I +P+Y SLNL+ AV V YE+ A LA + N + P L+ Sbjct: 120 RFVRIPVHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLD 179 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 + HLE+TLL + + M K RR++ RA S+E+ +LRGIL I+ + K Sbjct: 180 SYCQHLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQIDWLAQQIK 239 >UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales RepID=Q473D9_RALEJ Length = 314 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 9/253 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57 M +R VLVETSH GN+GSVARA+KTMG +L LV+P V+ A+A+A+GA DV+ Sbjct: 45 MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFG 114 A IVD+++ AL G + V +AR R P L PR+ +S+A A +A VFG Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE- 173 ER GL N+ +++C I ANP Y+SLNLA AVQ+IAYE+R+A L + Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224 Query: 174 --ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + +E +GHL+Q L A GF+ +P ++M +LRRL RA E +E+NILRG Sbjct: 225 GYAGEPATAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILRG 284 Query: 232 ILASIEQQNKGNK 244 I + +G + Sbjct: 285 IAKHMLIAVRGGR 297 >UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5A5_9PROT Length = 253 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 116/244 (47%), Positives = 151/244 (61%), Gaps = 5/244 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L NIR+VL T+H GN+G+ ARAMK MGL+ L+L+NP PD QA A+AAGA DV+ NA Sbjct: 7 LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + ++DEAL G L VG +AR R + + PRE + V +A VAL+FG E GLT Sbjct: 67 VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEE + V I ANPE+SSLNLA AVQVI+YE+ +A Q + Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVAAQNYQ-----PVEQSLQPAAHQ 181 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +E F HLE+TL GF +P ++M +LRRL+ RARPE+ E+NILRGIL+ + N Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241 Query: 242 GNKA 245 KA Sbjct: 242 RLKA 245 >UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0D5_DESRD Length = 256 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 4/248 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59 +L N+ +VL + N+GS ARA +G NL LV P +A LA G +V+ + Sbjct: 7 LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERV 118 + L AL+ V GT+AR+ + P + + A VA+VFG E Sbjct: 67 LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+NEE+ C + I E +SLNL+ AV ++ YE A + + Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYEWFKASSGKRFLRTTPPQ--SRLC 184 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 ++ E +++ LL F ++++ M +RR F R E N+L GI ++ Sbjct: 185 THEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQVKW 244 Query: 239 QNKGNKAE 246 + Sbjct: 245 LATRTDTD 252 >UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium MedeBAC49C08 RepID=Q4PK37_9BACT Length = 239 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 5/238 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + QN+ VLVETSH GN+G+ ARAM +MG+ NL LVNP P +++ A V+ A Sbjct: 3 IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVG 119 +I D L+EA+ +LV+GTSARSR++PWPM++ G A V++VFG E VG Sbjct: 63 NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLGKIINESLARKEKVSIVFGNEAVG 122 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NE+L KC +H+ I + + SSLNL+ AVQ++A+E+ ++ + E Sbjct: 123 LDNEDLGKCDFHLQIPTSED-SSLNLSHAVQIVAHEIYKGSSSSDLF---TQAREVELAS 178 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 E+ H+E L F +P QV +LRRL R + + E+ ILRGIL+++E Sbjct: 179 SQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236 >UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJE3_MEIRU Length = 257 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 122/257 (47%), Gaps = 18/257 (7%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ---------AIALAAG 52 L+NIRIVLV + N+G+ ARAM+ G+++LWLV P + A LA Sbjct: 4 LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63 Query: 53 ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVAL 111 A DV+ +VDTL EA+A LVVGT+ R R + P++ PR L+ A VA+ Sbjct: 64 AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123 Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171 VFGRE GLT +E+ V I +P SLNLA AV ++ YE+ Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEIF------GVAQAPPP 177 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 E L++ + L++ +L GF E + + RRL +AR E+ +LRG Sbjct: 178 PEPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLLRG 237 Query: 232 ILASIEQQN--KGNKAE 246 L K + Sbjct: 238 FLHQSRWYAQHGRRKTD 254 >UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5 Length = 277 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 4/240 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LVE N+G VARAM GL+ L LVNP P +A A A+ A VI + + Sbjct: 16 AIILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFE 75 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123 TL+EA+ + V T+AR R P+ P + ++FGRER GLTNE Sbjct: 76 TLEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEKTGILFGRERWGLTNE 135 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ V NP ++SLN+A AV +++YE M + E + + Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYEW-MKSGMDDLGETLFQPIEQRPSTKEQV 194 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242 + H+E+ L A G+ M + LR + +R QE+++ RG++ S+++ + Sbjct: 195 FGLFEHIEEALDARGYFHPAEKKPKMVDNLRAVLSRRGFSEQEISVFRGVIRSLDRFPRQ 254 >UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio RepID=B8DKE7_DESVM Length = 266 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54 ML N+ +VLV+T N+G VARA MG ++ LV+P ++A+ LA Sbjct: 1 MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60 Query: 55 DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVF 113 D++ +V TL EA+A C++V GT+AR+ +L P ++ A VA+VF Sbjct: 61 DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120 Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173 G E GLTN+E++ CH + I PE SSLNLA AV V+ YE Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYECLK--GTATHPFRPGPAP 178 Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233 ++ +LE + L TLLA ++R ++P M +RR R R E +++ G+ Sbjct: 179 DSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEFDLVMGVC 238 Query: 234 ASIEQQ 239 +++ Sbjct: 239 RQVKRM 244 >UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN85_9DELT Length = 252 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 4/243 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60 + NI ++L ++ N+GSVARA MG + L + +A LA + ++++ + Sbjct: 1 MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS-VAEAANTPVALVFGRERVG 119 L++AL G V TSAR + P + + E + ALVFG E G Sbjct: 61 EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRPETLDQDTALVFGPEDKG 120 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L N E++ C ++I + SLNL+ AV ++ YE + ++P Sbjct: 121 LANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFK--HVPAARTRHIPSWDSPPVT 178 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + ++ + ++++TLL F++ ++P M L+R + E N+L GI I+ Sbjct: 179 QEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLMGICRQIKWM 238 Query: 240 NKG 242 Sbjct: 239 AGR 241 >UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria RepID=Q6SFH7_9BACT Length = 248 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 103/241 (42%), Positives = 145/241 (60%), Gaps = 2/241 (0%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +IVL TSH GN+GS ARA+KTMG T+L LVNP P ++A ALAAGA D++ NA I Sbjct: 9 DQFKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V T+++AL L++G +AR R L + RE K +E+ + +AL+FG E GL+N Sbjct: 69 VSTIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSN 128 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +E++ CH I +N +YSSLNLA A+Q+I YE+RM + + E + Sbjct: 129 DEVKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQLSEDNAIIQSSKKNE--LVTHEV 186 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 FY HLEQ L GF+++ ++M +LR LF R E E+NILRGIL I+++ K Sbjct: 187 QNGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQKKIKD 246 Query: 243 N 243 Sbjct: 247 K 247 >UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae RepID=Q1GGZ7_SILST Length = 249 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 6/243 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 VLV N+G ARAM GL + +V P P+ +A+A+A+GA ++ A + Sbjct: 10 FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 L EALA C+ V T+AR R L P+ P K+ VA++FG ER GL N++ Sbjct: 70 LPEALADCTYVFATTARPRELTKPVFSPEGAMKKAAELMVQGEKVAVLFGPERAGLENDD 129 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + K + + + NPE++SLNLA V + AYE R Q E E ++ + ++E Sbjct: 130 IAKANAIITVPVNPEFASLNLAQCVLLTAYEWRRQQ--EQVAHETFEIGKSEWATNQEVE 187 Query: 185 RFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 H E+ L G F + R L++R + ++ +L G++ + + K Sbjct: 188 ALVNHYEERLTEAGYFFPPEKAPGMKTVFRNLWSRMQLTRADVQMLHGVMRQMVRW-KQR 246 Query: 244 KAE 246 + + Sbjct: 247 EED 249 >UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH Length = 260 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61 +N+RIVLV TSH GN+GSVARAMKTMGL L LV P PD QA A A+ A DV+ A Sbjct: 12 ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 D LD ALAGC LV+G SAR R + +LD RE G + VAEA + PVAL+FGRER GL Sbjct: 72 RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL +C V I ANPEY SLNLA AVQV+ +EV MA A V Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMARGAG------VVAPTRRSASA 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 D+E F+ HL + GF+R+++P +M +LR+LF RA P+ EL +LRG+LA++E Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242 >UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria RepID=B8HLP3_CYAP4 Length = 262 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 7/240 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60 L +RIVLVE + N+G+++R +K MGL L LVNPL P ++A +A A D++ A Sbjct: 12 LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 V TL +AL GC ++ T+ R + PR P AL+FGRE GL Sbjct: 72 RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWL----LGHPAALIFGREDRGL 127 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN EL + I +P Y SLNLA AV V +YE+ A+Q E + Sbjct: 128 TNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEPIAPGGGELARF 185 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 ++LE +Y LE LL G++ + M K RRLF R++P E+ +LRGIL+ +E Sbjct: 186 ENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALLRGILSQVEWAL 245 >UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms RepID=D0B958_BRUME Length = 291 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 4/235 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LV N+G VARAM GL L LVNP P +A A A+ A VI NA + D Sbjct: 31 AIILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYD 90 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123 L A+A + V T+AR R P+ E G ++FGRER GL+NE Sbjct: 91 DLPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEKTGILFGRERFGLSNE 150 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ + NP ++SLN+A AV +++YE + L Q + E P ++L Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237 F+ HLE+ L G+ R ++M N LR + TRA S EL +LRG++ S++ Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264 >UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples RepID=A4GJJ4_9BACT Length = 243 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 6/235 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE SH GN+G+ ARA+K MG L LVNP K +A A A D++ N I Sbjct: 8 DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + D A+ +L++ TSAR RT+PWP +D +KS + T +VFGRE GL+ Sbjct: 68 KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R + +V + Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVREVVSNL---- 183 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + E+ HL + L F QV ++ RL + R + E+ ILRG L+ I Sbjct: 184 ENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238 >UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4014 Length = 269 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 4/250 (1%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGN 59 +L R+VLV + GN+G+ AR M+ GL++L LV P A +A V+ Sbjct: 4 LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRER 117 A +V L +AL+ C + TS+ + + + E + +A A PVA+VFG E Sbjct: 64 ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIGTAAEQMPELLAAAEAGPVAVVFGPEP 123 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT-QENGEQVEHEETP 176 GL+NEE+ +CH V + ++P SLNLA AV + YE R AW + + E E Sbjct: 124 HGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEIPERA 183 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 D +R + HL L G++ +M+ +R+L RA P QE+ IL G+ + Sbjct: 184 VAPFADQDRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHGLARQL 243 Query: 237 EQQNKGNKAE 246 ++ K + Sbjct: 244 LWASRQMKRD 253 >UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria RepID=A5CWV4_VESOH Length = 247 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 8/239 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 +R+V+V T+ GN+G+ ARAMK M L+ L+LVNP P + A A A+GA DV+ +A Sbjct: 9 FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERVG 119 + ++L+EAL G LV+G SAR R + W +D K + VA++FG E+ G Sbjct: 69 VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LTN+EL C + I NP+Y SLN+A A+QV AY+ + T+ + + Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQNYIYNTPTE-----FKENVSKLAS 183 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237 D+LE FY HL Q L + ++ H +M +LR FT+ P+ +E++I RGIL +I+ Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242 >UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7Y7_MAGSM Length = 258 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 3/244 (1%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +L SH GN+G+ RA+ MG +L LV P P A AAG + I Sbjct: 10 LSGPVFILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQ 69 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV--AEAANTPVALVFGRERVG 119 + D+LD A A + +V + R R ++ PRE G++ + A++ V ++FG ER G Sbjct: 70 VFDSLDAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTG 129 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L ++++CH+ I + E SLNL+ AV ++AYE+ + + + ++ Sbjct: 130 LETADVERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLGQGLGEVPVHDPQRDDA-LAS 188 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++ RF+ HL+ L+ FI+ + Q+M L+ LF RA + +E+ ILRGIL + Sbjct: 189 QDEMVRFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEVIHH 248 Query: 240 NKGN 243 Sbjct: 249 CARK 252 >UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD Length = 255 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 12/251 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58 ++ ++V+ SH GN+GS ARA+KTMG +L LV P +A+ALA+GA+DV+ Sbjct: 5 FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPRYPDMTSQPEAVALASGATDVLE 64 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFGR 115 A + TL+EALA +L +AR R L P D R+ + +A + A+V G Sbjct: 65 RARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLGT 124 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR----MAWLATQENGEQVE 171 ER GLTN ++ C I ANPEYSSLN+A A+Q+ A+E+R A AT + Sbjct: 125 ERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALLRANGATLLPASTAQ 184 Query: 172 HEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229 + + ++ F H ++ L+ F+ HP ++M ++R LF+R+ E+++L Sbjct: 185 QPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEIDML 244 Query: 230 RGILASIEQQN 240 RG+ ++ ++ Sbjct: 245 RGVCTAMLRKK 255 >UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum centenum SW RepID=B6ISG6_RHOCS Length = 266 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 5/240 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+G+ ARAM GLT L LVNP P+ +A+A +AGA++V+ A + Sbjct: 25 VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNEE 124 EA+A V T+AR R + ++ PR A AA V ++FG ER GL N++ Sbjct: 85 TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + +++ NP +SSLNLA AV ++AYE M +E +P ++L Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEWWMEAAQAEEFYTHTGQ--SPPATKEELH 202 Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 + HLE L TGF + ++ +R RA QE+ GI+A++ + K Sbjct: 203 NLFDHLEGELDQTGFYTHPDKKPSMVRNVRNTLQRAHMTEQEVRTFHGIIAALVGRKKQR 262 >UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH Length = 384 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 8/242 (3%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 IVLV N+G+ ARAM+ GLT L LV P P+ A AAGA DV+ A + Sbjct: 140 AIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQVFA 199 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 T EA+A C+ + T+ R R + P++ P E ++A A++FG ER GL E+ Sbjct: 200 TTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQA--GKSAVLFGPERSGLETED 257 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + + +PE+ SLNLA AV + AYE E + + + P +L+ Sbjct: 258 VALARAILTVPIDPEFGSLNLAQAVILCAYEWSK----GAELEQPTQEDLLPPAPQAELD 313 Query: 185 RFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 HLE L G+ + LR + T+ E+ LRG+L+S+++ +K Sbjct: 314 DLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGDKVP 373 Query: 244 KA 245 K Sbjct: 374 KG 375 >UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium HF10_12C08 RepID=A4GJN4_9BACT Length = 245 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 5/245 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60 I I+LV+T N+G VAR+M G TNL LV+P P +A+A+A A +++ N Sbjct: 3 FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +L EAL+ S +G +AR R + D + + + N + +VFG E GL Sbjct: 63 KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN+ L V I + +SSLNL+ AV V Y + T++ V+ P+ Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTEQL---VDKNSEPHGSQ 179 Query: 181 DDLERFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 +DL F+ HLE+ L + GF + ++ LR +F RA +E+ LRG++ + + Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQNLRNIFHRADLSEREIATLRGVVRVLSEY 239 Query: 240 NKGNK 244 K + Sbjct: 240 RKTKE 244 >UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A381_THESM Length = 246 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 10/248 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIAL-AAGASDVIGNAHI 62 ++++LVE + N+G++AR MK G+T+L LVNP V P+++ A A D++ NA I Sbjct: 2 KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERVG 119 ++L+EAL L +GTS + P + P E + + + LVFGRE G Sbjct: 62 HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRL--SIYDGEIGLVFGRESRG 119 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL+K + V I + EY +NL+ AV VI YEV L + ++ Sbjct: 120 LDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKS---T 176 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQ 238 + E + L + ++ + + +R R ++E++ L G L + Sbjct: 177 RQEREMLVEFWAKFLDTLEYPKDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRRAIK 236 Query: 239 QNKGNKAE 246 + K + Sbjct: 237 LLERCKND 244 >UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC Length = 271 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 93/243 (38%), Positives = 129/243 (53%), Gaps = 10/243 (4%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 I+IVL TSHTGN+G+VARAMK MGL L LV+P D QA+A A A+D++ A Sbjct: 18 DRIQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQ 77 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 VD L +ALA V T+AR R L P++ R+ A + +++VFG ER GLTN Sbjct: 78 VDNLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTN 137 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +E+ + I ANP+Y LNL AVQ++AYE RMA T + Q + T Sbjct: 138 QEISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMA-HGTARSAPQPNIDSTELATTAQ 196 Query: 183 LERFYGHLEQTLLATGFIRE---------NHPGQVMNKLRRLFTRARPESQELNILRGIL 233 F L + L T F + ++M +LR L RA P EL +++GI+ Sbjct: 197 WAAFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIV 256 Query: 234 ASI 236 ++ Sbjct: 257 RAL 259 >UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae RepID=B7A9R4_THEAQ Length = 244 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 94/248 (37%), Positives = 124/248 (50%), Gaps = 12/248 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS----QAIALAAGASDVI 57 L +R+VLVE N+G+VARAM+ GL L+LVNP + +A LA A +++ Sbjct: 5 LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64 Query: 58 GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 A VD+L EALA LVV T+ R R L + P + + + VALVFGRE Sbjct: 65 DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPA-WEVPARVLSVEGEVALVFGRET 123 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GLTNEEL H I PE SLNLA AV V AYE+ A + E Sbjct: 124 FGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPRE-------EL 176 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 V LE F+ L + +L GF +N M +LRR+F +AR E+ +LRG+L Sbjct: 177 AQVAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQSR 236 Query: 238 QQNKGNKA 245 Q + Sbjct: 237 YQMRKKDG 244 >UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales RepID=B1Y5A0_LEPCP Length = 252 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 8/230 (3%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62 R +L+ TSH GN+G+ ARAMK MG +L LV P V + +A+A+GA+D++ A I Sbjct: 9 RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 V TLDEAL G + T+ R P PRE A VA VFG ER G++N Sbjct: 69 VATLDEALEGIHVACATAMTPRDFGPPTSTPREHLPAL--AAGGERVAFVFGSERYGMSN 126 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE+ +C ++I P+Y SLNLA AVQ++AYE RMA + +D+ Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMALGGYDVSARTPA---VQRASLDE 183 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232 ++ H + TL+A GF+ P ++M +L++L RA +E++ILRGI Sbjct: 184 VQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233 >UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53114 Length = 251 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 5/245 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 ++LVE N+G+VARAM GL L LV P P+ A A+A+GA +V+ +A Sbjct: 9 NRPVVILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLTSAE 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGL 120 + + ++A+ + + T+AR R L ++ P E + +FG ER GL Sbjct: 69 VFEQTEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSERSGL 128 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N+++ Y + + NPE+SSLNLA AV ++ YE A L + + + + Sbjct: 129 INDDIAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWG--NSELSTI 186 Query: 181 DDLERFYGHLEQTLLATGFIRENH-PGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + E FY LE+ L GF+ + LR +F++A +QE+ L GI+ ++ Sbjct: 187 GEREYFYKRLEKHLDEAGFLYPLELAPTICRNLRAMFSKATLTNQEIRTLHGIVTALSNY 246 Query: 240 NKGNK 244 +K Sbjct: 247 TPDSK 251 >UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas intermedia K12 RepID=C7HY98_THIIN Length = 260 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 89/245 (36%), Positives = 131/245 (53%), Gaps = 7/245 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58 L + VLV TSH GN+G+ ARA+K MG NL LV P + +A A+GA DV+ Sbjct: 18 LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPETLAFASGAEDVLK 77 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRER 117 A + L +A+A C +VV SAR R P+ P + A VA VFG ER Sbjct: 78 TAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRRVAFVFGSER 137 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL+N ++ +C ++I ANP Y+SLNLA AVQVIA+E R + + E+ Sbjct: 138 FGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQAESVA 194 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 +++ H+EQ LLA + N P +++ +L+RL +RA E+ ILRG+ ++ Sbjct: 195 ATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVCTAVL 254 Query: 238 QQNKG 242 ++ Sbjct: 255 RKVPK 259 >UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales RepID=A7IP45_XANP2 Length = 298 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 113/242 (46%), Gaps = 5/242 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65 ++LVE N+GS ARAM GL+ L +VNP P A +AGA ++ A + Sbjct: 19 VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124 L AL G + +AR R + P+L ++ + A VALVFGRER GL EE Sbjct: 79 LRSALVGVNYAFAATARERGMAKPVLGADAVAQEARSRLAGGEDVALVFGRERTGLYTEE 138 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + C + + NP ++SLNLAM V V YE A + +P DL Sbjct: 139 VSLCDAILTLPVNPAFASLNLAMCVAVTGYEWFKAETGGALPFAPPDR--SPLADKGDLL 196 Query: 185 RFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 F+ HLE L +GF R + LR +F R Q+L L G + ++E+ G Sbjct: 197 AFFDHLEGALEQSGFFRSPEKAPSTIRNLRNIFHRLGLTRQDLATLHGAVTALEEGRAGR 256 Query: 244 KA 245 A Sbjct: 257 DA 258 >UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQ32_9BURK Length = 269 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 99/252 (39%), Positives = 142/252 (56%), Gaps = 10/252 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58 L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P K +AI+LA+GASDV+ Sbjct: 7 LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66 Query: 59 NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRER 117 A I +TL EALA S+ SAR R L + P+E +++ + A VFG ER Sbjct: 67 QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------TQENGEQVE 171 GL+N+EL C+ V IAANP YSSLNL+ AVQ++AY +R W A Q + Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 + V + H + + A F+ + P +V+ +L R+ + E +E+++LRG Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246 Query: 232 ILASIEQQNKGN 243 + + + Sbjct: 247 FFSDVIRVVDNR 258 >UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae RepID=Q2P2B7_XANOM Length = 254 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 107/240 (44%), Positives = 136/240 (56%), Gaps = 4/240 (1%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IR VLV T H GN+G+ ARAMKTMG++ L LV P D A +AGA DV+ A I Sbjct: 7 IRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPIFA 66 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLK-SVAEAANTPVALVFGRERVGLTNE 123 TL EA+A C+LV+G +AR+R + L P E + + VA VFGRER GLTN+ Sbjct: 67 TLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLTND 126 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLV 180 ELQ CH V I ++P++SSLNLA AVQV+AYEVR+A LA E Sbjct: 127 ELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPASH 186 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 LE +G L TL F + P M KLRRL RA QE+ ++RGIL+ ++ Sbjct: 187 AQLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQRMA 246 >UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales RepID=B7KUQ9_METC4 Length = 245 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 4/241 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIA-LAAGASDVIGNAHIVDT 65 ++LVE N+G ARAM GL+ L LV P + + A+GA+ V+ A + T Sbjct: 6 VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNEE 124 L EA+A ++ T+AR R + P + + V L+FGRERVGL+N+E Sbjct: 66 LPEAIADLHFLLATTARERGQMKRVFAPEDAMAATAERIGRGERVGLMFGRERVGLSNDE 125 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + V E+ SLNLA AV ++ YE R A A +P + + Sbjct: 126 VSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRA--AGLATLRFSGEMLSPPATREAML 183 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 + LE+TL GF + +R + R Q++ RG L ++ ++ + Sbjct: 184 SLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKARKTD 243 Query: 245 A 245 Sbjct: 244 E 244 >UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH2_9PROT Length = 293 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 6/242 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 ++LV N+G+ ARAM GL L LV P P++ A A+AAGA++V+ + T Sbjct: 41 VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVGLTNEE 124 + EA+A C VV T+AR R + P+ P + + A A++FG E+ GL EE Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + H V I NP + SLNLA AV V+AYE A A + + + E Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYEWAQAAGAAPLFTSPYQED---PATQAERE 217 Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 + + HL L G+ +H +V+ + LR L A EL +L G++ E+ Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERHLPEK 277 Query: 244 KA 245 Sbjct: 278 SQ 279 >UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales RepID=Q28PL2_JANSC Length = 258 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 5/244 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 VLV N+G+ ARAM GL + +V+P P+ +A+ALA+GA ++ NA + Sbjct: 16 AFVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQ 75 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 L AL+ C+ V T+AR R L P++ P ++ A A V ++FG ER GL N Sbjct: 76 DLPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENA 135 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ +++ NP + SLNLA V + AYE + E + +T + ++ Sbjct: 136 DIAPADAIISVDVNPAFPSLNLAQCVLLCAYEWQRQGSTVAP--EVMALAKTDFASNLEV 193 Query: 184 ERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 E+ H E+ L GF + LR L+ R ++ L G++ + + +G Sbjct: 194 EKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVRWAEG 253 Query: 243 NKAE 246 + + Sbjct: 254 RRKD 257 >UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria RepID=Q2RWJ5_RHORT Length = 279 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 116/238 (48%), Gaps = 5/238 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD 64 IVLV N+G VARAM GLT L LV P +AIA A+GA ++ A + Sbjct: 19 AIVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFE 78 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 T + A+A + V T+AR R + +L PR + + AA A++FG ER GL+N+ Sbjct: 79 TTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSND 138 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 ++ V + NP Y SLNLA AV ++ YE A EQ+ +T +L Sbjct: 139 DVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQA--GDATPAEQLVTNDTQPATRGEL 196 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQN 240 F+ HLE+ L GF+R M LR LF RA QE+ L G++ + Sbjct: 197 LGFFDHLERELDDCGFLRNAAKRPGMVRNLRNLFERADLTEQEIRTLHGVVKELRHGR 254 >UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU Length = 231 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 20/246 (8%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M +++I+LVE + GN+GSVARAMK G ++L LVNP + +A A A+ A D++ +A Sbjct: 1 MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNPC-ELKMEARAFASHAYDILESA 59 Query: 61 HIVDTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGR 115 V+T++EAL G LV+ T+ + + P PR+ LK + +A++FGR Sbjct: 60 KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117 Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 E G TNEEL+ V+I + Y +NL+ AV +I YE+ + E Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYEMSQ-----------ILAGEN 166 Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 DL + H+++ L + + + +R+F RA+ +E+ LRG + Sbjct: 167 SLADGFDLRLLFEHIDEVLDDIDY-PAHKKEKTHLMFKRIFGRAQLMPREVQTLRGFIGK 225 Query: 236 IEQQNK 241 +++ K Sbjct: 226 VQKHIK 231 >UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae RepID=A1KUH1_NEIMF Length = 292 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 25/264 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP--------------------LVK 41 L NIRI+L TSH N+GS ARAMKTMGL L +V P K Sbjct: 33 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92 Query: 42 PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 93 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVSELL 152 Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 A VALVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 153 QTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 212 Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220 + + +Q +H + ++ H+E + GF + ++M +++ LF RA Sbjct: 213 GSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 268 Query: 221 PESQELNILRGILASIEQQNKGNK 244 ++++++ILRG ++ + Sbjct: 269 TQTEDIDILRGFFNTVSHRIHKKD 292 >UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGR7_THEYD Length = 252 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 8/240 (3%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ VLVE +GN+G+ ARA+K MG TNL L+NP V +A +A + DV+ A I Sbjct: 10 ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINP-VPLQDEAYWMAWASKDVLEKAQI 68 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 LDE+L +L++GT+ R ++D ++ + A N VA++FGRE GL N Sbjct: 69 FRELDESLKDKALIIGTTRRRGAKRGAIIDVKDGVKRVYEVAQNNKVAILFGREDKGLFN 128 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE++KC Y + I + SLNLA AV ++AYE+ E + Y + Sbjct: 129 EEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYELMRC-----EELKDFHMNRQFYVSQTE 183 Query: 183 LERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 L++ Y L + L +I + +++N R F R EL +L G+ IE+ Sbjct: 184 LDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEELI 243 >UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W0D7_NEICI Length = 330 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 137/264 (51%), Gaps = 25/264 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP--------------------LVK 41 L NIRI+L TSH N+GS ARAMKTMGL L +V P K Sbjct: 71 LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130 Query: 42 PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101 ++ LA+GA+DV+ NA I +LDEALA ++ ++R R + P+ PR+ + + Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVPELL 190 Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 A V LVFG E GL+ EE+Q C+ + I NP+Y SLNLA AVQV+ YE+ Sbjct: 191 QAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 250 Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220 + + +Q +H + ++ H+E + GF + ++M +++ LF RA Sbjct: 251 DSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 306 Query: 221 PESQELNILRGILASIEQQNKGNK 244 ++++++ILRG ++ + Sbjct: 307 TQTEDIDILRGFFNTVSHRIHKKD 330 >UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus RepID=B5IRU8_9EURY Length = 245 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 9/247 (3%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + ++LVE + N+G VARAMK + L LVNP + +A A A DV+ NA IV Sbjct: 2 KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNP-PELRGEAYKFAMHAKDVLENAKIV 60 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDP---RECGLKSVAEAANTPVALVFGRERVGL 120 T+DEAL + VGT+ S + P P E A + + FGRE GL Sbjct: 61 KTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAK--RAFLYGGKIGIFFGRESKGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +NEEL+K + V I + EY +NL+ AV V+ YE+ + + + E+ H Sbjct: 119 SNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRH--LRKATR 176 Query: 181 DDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 ++ + + + L + LRR+ R+ ++E+ L G L ++ Sbjct: 177 EEKDILVKYWSELLETLNYPKDPIRRKYFTIMLRRVIGRSFIYAREIYSLYGPLRLAIEK 236 Query: 240 NKGNKAE 246 K + + Sbjct: 237 IKRYEND 243 >UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0P2_DESAC Length = 243 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 110/237 (46%), Gaps = 7/237 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 +VLVE GN+G+V RAM G+ L LV S A+ + GA ++G A Sbjct: 7 IVVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPD 66 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L ALA V + R+ L +L E + + AA + VA VFGRE GLT +E+ Sbjct: 67 LAAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEV 126 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 C I E SLNLA AV V YE+ ++V + P D E Sbjct: 127 ALCSQAATIETTDETGSLNLAQAVVVTLYELSRRQ-------DRVGIVQRDQPTHDQFEP 179 Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 + L++ + G++ + P + LRRL +A P+ ELN LRG++ + + + Sbjct: 180 LFQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLINRLSESVQD 236 >UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG74_LIBAP Length = 268 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 6/242 (2%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 I+LV+ N+G VARAM LT L LVNP P +A + +A A VI + + Sbjct: 17 IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124 L EA+A + T+AR+R +L P+E + + V ++FGRER GLTNEE Sbjct: 77 LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEE 136 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + ++ NP + SLN++ AV ++ +E + + E + E+ +L Sbjct: 137 IALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSEKNVK---EQNTPATKGELL 193 Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 F +LE +L G+ R ++++ L +F R +E+ +LRGI++++++ ++ + Sbjct: 194 SFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQS 253 Query: 244 KA 245 Sbjct: 254 SR 255 >UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus RepID=Q1IWV0_DEIGD Length = 254 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62 N+ +VLV GN+G+ ARAM MG ++L +V P P DSQA+A+A A+D++ +A I Sbjct: 2 NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 TL EALA L VGT+AR R P P + A +A ALVFG E GL N Sbjct: 62 YPTLREALADRDLSVGTTARLRADLPPPRHPAQVRPLVRAASAP---ALVFGPEETGLVN 118 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +L++C V + EY+SLNLA AV ++ YE A T + +T ++ Sbjct: 119 SDLEQCQVTVRVPTA-EYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKT--ATREE 175 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 +E YGHL +T+ G+ + R + RA S E + RG L + + + Sbjct: 176 MEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQVRWKVED 235 >UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A5GRX6_SYNR3 Length = 248 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 5/243 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59 M ++ +VLVE S N+GSVAR G+ +L LV P P A +A + + Sbjct: 1 MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERV 118 + +L++A+A C VV S R L P+ + + VALVFGRE Sbjct: 61 CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQPALQWLLEPKPGPNHVALVFGREDH 120 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL + EL + I + Y SLNL+ AV + E + ++ P P Sbjct: 121 GLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS---SPPLP 177 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 LE E+ LL GF+ + M KLR+L R+ P E+ +LRG++ + Sbjct: 178 AHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMVRQLRW 237 Query: 239 QNK 241 ++ Sbjct: 238 ASR 240 >UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota RepID=Q0W2E0_UNCMA Length = 249 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 20/247 (8%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+GSV RAMK G +L LV P + + A A+A+ A D++ +A IV Sbjct: 8 HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPC-ELGNSAKAMASHAQDLLASAAIV 66 Query: 64 DTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 DT++EAL G S++VGT+ + + P PRE LK++ E VAL+FG+E Sbjct: 67 DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NE L+KC ++I + +Y +NL+ AV V+ YE+ ++ + Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-----------ADIKGNDFLLA 173 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + E Y H+EQ L + + + +RR+ RA +E L G++ I+ Sbjct: 174 DSEMQEILYQHVEQLLDSINYADY-KKDKTSLMIRRIIGRAMISPREYFTLMGLIRDIQL 232 Query: 239 QNKGNKA 245 +A Sbjct: 233 ALARAEA 239 >UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae RepID=A1VM17_POLNA Length = 311 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 22/257 (8%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62 R +L+ TSH GN+G+ ARAMKTMG +L LV P V + I A+GA DV+ NA I Sbjct: 40 RFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNARI 99 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------------ECGLKSVAEAAN 106 V+TLDEAL G + + T+ R P PR E G Sbjct: 100 VETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQRP 159 Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 VA +FG ER G+ NE++ +CH ++I +P++ SLNL AVQ+IAY+ R A Sbjct: 160 DSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF--- 216 Query: 167 GEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226 G Q EE + H E+ L+ GF+ P ++M +L +LF RA+ +E+ Sbjct: 217 GIQAAIEEPRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSPEEI 276 Query: 227 NILRGILASIEQQNKGN 243 +ILRG+ ++ + Sbjct: 277 HILRGVAKAMMRHAPDK 293 >UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ Length = 250 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 6/238 (2%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAH 61 +R VLVETSH GN+GS ARA+KTMG +L LVNP ++AIALA+GA DV+ A Sbjct: 9 LRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLETAT 68 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGL 120 + +L++A+ CSLV+G ++R R P LD L S A VA+VFG ER GL Sbjct: 69 VSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERTGL 128 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY--P 178 NE L C + V + ANP+Y SLNLA A+ V AY +R + + Sbjct: 129 ENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVDFA 188 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + H + L A G++ HP ++M + + LF R+R +E+++LRGI + Sbjct: 189 DPIAVAAMLEHWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRGIAKQM 246 >UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R186_9DELT Length = 304 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 103/238 (43%), Gaps = 4/238 (1%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDT 65 IVL N+GS AR MG+ +L +V + + A A+ +I T Sbjct: 19 IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 + EALA V+ TSAR PR ++ A VAL+FG E GLTNE+L Sbjct: 79 VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 CH I ++SSLNLA AV V+ YE+ A Q V V +LE Sbjct: 139 YLCHQLTTIPTA-DFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195 Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 YGH+EQ L GF+R M +R L R ++E ++RG + Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGFCRQFLWYDAQR 253 >UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus RepID=Q31MT7_SYNE7 Length = 245 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 10/242 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63 +RIVLVE + N+G++AR M GL++ +V P +A +A A+ ++ A +V Sbjct: 3 LRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVLV 62 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D L AL GC V T+ + P+ P + P AL+FGRE GL Sbjct: 63 DNLPSALEGCQWVAATTGQRDLRDLPLESPTQILPWLRQ----GPAALIFGREDSGLQRS 118 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL ++ +P Y SLNLA AV + Y A L+ ++ + E +P + Sbjct: 119 ELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYHY--ACLSEADSRGVPQQESSPAAVRAAF 176 Query: 184 ERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E+ +G+ LE LL G++ + M K+R + R+ ++E+ +LRG++ + Sbjct: 177 EQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQLNWAL 236 Query: 241 KG 242 Sbjct: 237 NQ 238 >UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY Length = 243 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 101/247 (40%), Gaps = 17/247 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I IV VE TGN+G +AR M G NL LVNP + D A + A +I NA Sbjct: 8 FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNP-PELDEDAYRFSKHARYIIENAE 66 Query: 62 IVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 I++ +E +V TS S + L PRE K + + +VFGRE Sbjct: 67 ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWN--FSGNIGIVFGREN 124 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL NEE++KC + I + EY +N+ A +I YE+ M E+ E E P Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFM---------EKREEEGMPL 175 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 + + L F + RR+ RA E + + G++ I Sbjct: 176 AEEFESNLLNERFSELLGLINFPD-HKRKNTEVMFRRIIGRAMLTKWEYHSMMGVMKRII 234 Query: 238 QQNKGNK 244 + Sbjct: 235 YAIQAKD 241 >UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus RepID=Q31AG9_PROM9 Length = 249 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 6/246 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60 N++++LVE + N+GSVAR + L +V+P S +A +A + + Sbjct: 7 FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119 I D L+ A+ C LV+ + R + + E + + +A++FGRE G Sbjct: 67 KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINNLAIIFGREDRG 126 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L+N EL + I + SLNL+ AV ++ YE+ + E E Sbjct: 127 LSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNKSSKRNFNK----ELEVFNLAS 182 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + + +E+ LL G++ E+ ++K + +RA E+N+LRGI+ I Sbjct: 183 SKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQINWF 242 Query: 240 NKGNKA 245 +K Sbjct: 243 LNNSKR 248 >UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12 Tax=Methanococcales RepID=Y1476_METJA Length = 230 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 10/237 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ I ++LV ++GN+GS+AR M G L +V +++A +A A +++ NA Sbjct: 1 MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117 +T DEA+ V+ TS R L + P+E K + + +VFGRE Sbjct: 61 KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEV--KGNIGIVFGRED 118 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 GL NEE+ KC V+I + +Y +NL+ AV VI YE+ T++ + Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEIY-----TKKVRNKFLDINMRE 173 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 +D E + + I E+ +RL RA +E L Sbjct: 174 ASKEDKELLIRKFNEFIDKNEKIPEHKKELCKIIFKRLVNRAFISGKEAWTLMSAFK 230 >UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G643_NOVAD Length = 251 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 8/242 (3%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65 IVLV N+G ARAM GL + LV+P P+ A AAGA V+ A + T Sbjct: 13 IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L EA+A CS V T+ R R + P+L P + +A+ A++FG ER GL +++ Sbjct: 73 LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDI--VSASGRSAIIFGPERSGLETDDV 130 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185 V + NPE+ SLNLA AV + AYE Q E + P ++ E Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDM----LPPAPQEEFEG 186 Query: 186 FYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 + L L G+ LR + T+ E+ +RG+L+++ ++ Sbjct: 187 MFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRRKPGSRP 246 Query: 245 AE 246 + Sbjct: 247 GD 248 >UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon RepID=D1JIN9_9ARCH Length = 234 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 20/242 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +RI+LVE N+G+VAR K G ++L++VNP + +A+++AA A DV+ + IVD Sbjct: 3 VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNP-PEIGIKALSVAAHAYDVLQSCKIVD 61 Query: 65 TLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 +L A+A ++V GT+A+ L P P E LK ++++FGRE VG Sbjct: 62 SLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGREDVG 119 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L N+EL+ C V+I +PEY +NL+ AV VI YE+ T E Sbjct: 120 LLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLE-----------LAP 168 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 V+D ER Y L+ L G+ RE+ + + LRR+ RA ++EL L+GI+ E + Sbjct: 169 VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAEWR 227 Query: 240 NK 241 Sbjct: 228 IG 229 >UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9A6_GEMAT Length = 283 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 6/246 (2%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 +L + +VL E+ + N+G V RAMK MG+ +L L+ P ++ +A D++ Sbjct: 5 ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +T+DEALA C VVG S R + W PR + + A VA++FGRE GL Sbjct: 65 QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 NE L + + I + SLN+A A + YE+ M + H P Sbjct: 125 PNEALDRSNAICTIPTTEHF-SLNVAQACLLALYELHMLAGDATKRLPPPRHAA-GSPSK 182 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG----ILASI 236 DD+ER + + L A + + +M R L RA P+ +EL ++R +L +I Sbjct: 183 DDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTASIEVLRTI 242 Query: 237 EQQNKG 242 E++ + Sbjct: 243 ERETRQ 248 >UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus RepID=Q46JZ1_PROMT Length = 245 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 4/241 (1%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63 ++++LVE + N+GSVAR + + L LV+P + +A +A ++ A + Sbjct: 7 LKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAKVY 66 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L+ AL+ CS ++ T R P+ ++ + +ALVFGRE GL+NE Sbjct: 67 EDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSEREDTIALVFGREDRGLSNE 126 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL K + +++ + +Y SLNL+ AV ++ ++ + + + L Sbjct: 127 ELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQLNDLDLLKRHT---KISSPANLIKL 183 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 E LL GF+ ++ M K+++L R + E+ ++RGI++ + K Sbjct: 184 EDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIISQARWKIKNK 243 Query: 244 K 244 Sbjct: 244 S 244 >UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY Length = 235 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G + L L+NP ++ A A A DV+ NA I+D Sbjct: 2 ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPN--LTEESYAYAVHARDVLENALILD 59 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNE 123 + ++AL VGT+ + P P L + + V + FGRE +GL NE Sbjct: 60 SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELVGLIKDYPGEVGIFFGRESIGLKNE 119 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL + I + EY +NLA A V+ YE+ + E ++ Sbjct: 120 ELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYELSKKR-------PEPYVEALKPATREEK 172 Query: 184 ERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 E E+ L + ++ + +R RA +E++ L G L ++ + Sbjct: 173 EALVRTWEKLLNTLDYPKDAERRDVFVKVFQRAVGRAFLYGREVHTLIGPLRKALKRLEE 232 Query: 243 NK 244 + Sbjct: 233 CR 234 >UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM7_HIRBI Length = 253 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 5/243 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LV N+G+ AR M GL +L ++NP P+ +A ++AGA + A + D Sbjct: 11 AIILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFD 70 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 TL+ LA + V+ T+AR R + P+ + E ++ V ++FG E+ GL NE+ Sbjct: 71 TLEAGLADLTYVLATTARPRGMEKPVFNAEEGIGALMSRPDVG-VGVMFGAEKAGLLNED 129 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 + + + +SSLNLA AV V A+ L + E ++ + L Sbjct: 130 VALADGILTYPVDRSFSSLNLAQAVGVFAHSWAARTLEGEAKKEFAGVGDS--ADREQLV 187 Query: 185 RFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKGN 243 R + H E L GF VM LR F RA+ +QE+ RG + ++ Sbjct: 188 RMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKALALGRGKA 247 Query: 244 KAE 246 + + Sbjct: 248 RID 250 >UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae RepID=Q0AQY2_MARMM Length = 249 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 9/242 (3%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 +L N+G+ AR M GL L +V+P P+ +A+ ++AG S V+GNA + Sbjct: 9 AFILHTPQLGENIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEY 67 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123 L +A+ + + T+AR R + P++ RE A A VA++FG E+ GL NE Sbjct: 68 RLGDAIHDTTRLYATTARPRGMEKPVMTAREAVSDMKAAIEAGEKVAVMFGGEKSGLPNE 127 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 + + + + +SSLNLA AV VIAYE E + +DL Sbjct: 128 AVNMADVIITLPVDRSFSSLNLAQAVAVIAYEW-----TAGEGAPAEFEPVSDVAKREDL 182 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242 ER + H E L GF +M LR F R R QE+ RG + ++ Sbjct: 183 ERMFEHFETELERAGFFHPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKALTLGRGK 242 Query: 243 NK 244 + Sbjct: 243 AR 244 >UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA Length = 234 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 11/242 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 ++R+VLVE + GN+G VAR MK G+ L+LV P + AIA A A D++ NA IV Sbjct: 2 DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 +TL+EA+ + T+A P +P A + +A+VFG E GL Sbjct: 62 NTLEEAIEDVEAAIATTAVL--ASTPARNPMMPWEVREAFSDYEKIAVVFGPEDRGLRTW 119 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E++ C + I + EY S+NL+ +V V+ YE++ E V + Sbjct: 120 EVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKM--------EYVPERYGRAATKREK 171 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243 E L+ + A F V RR RAR +E+ L I +++ G Sbjct: 172 EVLVKSLDDLMKALNF-DSTRRENVCTTFRRFLARARCTDKEIKALLWIFEKAKRRVLGV 230 Query: 244 KA 245 K Sbjct: 231 KR 232 >UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus RepID=C5A3L4_THEGJ Length = 243 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 105/243 (43%), Gaps = 13/243 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ +VLVE N+G VAR MK G + L LVNP ++ + A A DV+ NA Sbjct: 10 MMP--SVVLVEPEGPANIGMVARTMKNFGFSRLVLVNPN--LSEESYSYAVHARDVLKNA 65 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVG 119 IV+T +EAL L VGT+ + P L+ + V L FGRE +G Sbjct: 66 TIVETFEEALELFDLTVGTTGKPGRRFISYRAPLYPWELRETLKGYTGEVGLFFGRESIG 125 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL++ V I + +Y +NLA AV VI YE+ + E Sbjct: 126 LKNEELERLDLIVTIPTSEDYPVMNLAQAVAVILYELSKTR-------PEPSVEALKPAT 178 Query: 180 VDDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 D+ E + L + E + R+ +A +E++ L G L + Sbjct: 179 RDEKEALVRVWAELLKVLEYPKDEERREVFVKVFRKAVGKAFLYGREVHTLIGPLRRAVK 238 Query: 239 QNK 241 + + Sbjct: 239 RLE 241 >UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7Y1_FERPL Length = 230 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 22/246 (8%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE N+G +AR MK G L L N ++ AA A DV+ A V+ Sbjct: 2 IEVVLVELKIPENIGFIARVMKNFGFEKLVLYN--CNVSKESYITAAHAKDVLDKAVKVE 59 Query: 65 TLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 L E L +LVVGT+ R + P P E A++FGRE G Sbjct: 60 NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEELREMI-----KGETAILFGREDYG 114 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L +EEL+ C+ V++ + EY +N++ A VI YE+ + E E+ Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSK---------GKFEFEKEEIAT 165 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 D++R + E+ + + F E+ G++ L+R F RA E++ + GI+ Sbjct: 166 QKDVDRLVEYFEKLMKSIWF-PEHRIGRMKVVLKRAFGRAALTKYEVDAISGIIRKTLLY 224 Query: 240 NKGNKA 245 + K Sbjct: 225 LEELKK 230 >UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter RepID=Q4FLI9_PELUB Length = 237 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 8/240 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNA 60 NI +L + + N+G+ ARA+K L +V P P+ + +A + GA D+I NA Sbjct: 3 FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +TL+ A+ VV TSAR R ++ + N +A +FG E GL Sbjct: 63 KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD----LKKIDFNKKIAFLFGSEASGL 118 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +N E+ +Y + I NP++ SLNL+ +V +IA+ V A + + + + ++ Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQ 239 D++ + L F + +M LR +F++ +E IL + AS+ ++ Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLENLRSIFSKMELSEKETRILSSVFASLSKK 236 >UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae RepID=A5UK71_METS3 Length = 301 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 11/242 (4%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 NI IV VE GN+G +AR M GL NL L+NP +A A ++ NA I Sbjct: 68 NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPT-LTPEAFYQATHGKYIVDNAKI 126 Query: 63 VDTLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 TLDE V ++ + P N A++FGRE GL Sbjct: 127 YHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLGKNINTNNKTAILFGREGNGL 186 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEE++ C V+I +P Y LN++ A +I YE+ E Sbjct: 187 TNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMHE-------YPVEGLEESTA 239 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 + E + + I E+ + + + RA +E + L+GIL ++ + Sbjct: 240 IEKEYVLKDMYDLIDGLD-IPEHKKKNGLKSFKNIINRAYITGREAHTLKGILRRLKMKM 298 Query: 241 KG 242 Sbjct: 299 GK 300 >UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F137_ACIC5 Length = 240 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 7/240 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 I +VLV T + N+G+ ARAM G +L +V P +A A GA+ ++ +A Sbjct: 8 PAIAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEA-RSAVGAASILASARE 66 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 TL +A+A C+ V+GTSA P + L +A+ +ALVFG+E+ GLTN Sbjct: 67 CSTLADAVADCTCVLGTSAIGDRQPLQPIVDLPAALPWLAQRVAGRIALVFGQEKHGLTN 126 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +L C + I PE +S+NL AV V YE + A E D Sbjct: 127 HDLSHCDAILRIPTLPEQASMNLGQAVAVCLYEFARSGHAPTA------TEAPKAAPAAD 180 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 LER L + L +G+I+ + + R L R ++ ++L G+LA IE++ Sbjct: 181 LERLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERKLAR 240 >UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5 Length = 233 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 12/237 (5%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHI 62 N I+L+ N+G+ ARAMK GL L +V P P+ QA + A GA ++I +A I Sbjct: 5 NPIIILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKI 64 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 D+L++++ + T+ R + + + L + V ++FGRE GL+N Sbjct: 65 FDSLEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLDY---PNSEKVGIMFGRENNGLSN 121 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EE+ + + I ++SSLN+A AV +I YE+ ++ H ++ Sbjct: 122 EEIAFANKIITINTT-KFSSLNIAQAVIIICYELFRNSTPRED-----VHNIQKLATKEE 175 Query: 183 LERFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIE 237 +E F +L L GF + + + + +FTR S E+ L+GI+ S+ Sbjct: 176 IEHFLVNLFGKLDKAGFFKAPDKKPAMQQNITNIFTRINSLSSPEVQTLQGIIKSLN 232 >UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG27_ARCPR Length = 234 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 19/246 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I + LV N+G VAR MK G L+L N K + + A+ A D++ NA ++ Sbjct: 2 ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYN--CKVTTVSFKTASHARDILRNAVVLR 59 Query: 65 TLDEALAGCSLVVGTSA-----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 D+ L +++VGT+ R + P+ P E ++ E +A+ FGRE G Sbjct: 60 KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEEF--RNFLEGKKGEIAVAFGREDYG 117 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 L NEEL+ CH V++ NPEY +N++ AV VI YE+ + E+ Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYELSK---------GKYGLEDKTIVT 168 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 ++E+ + E+ +L T + R + + LRR+ R+ +EL +L GI+ Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227 Query: 240 NKGNKA 245 + K Sbjct: 228 IQHLKK 233 >UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIP4_RHOVA Length = 263 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 11/244 (4%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+LVE N+G+ ARAM GL L LV P P+ A A AA A +++ A + Sbjct: 11 AIILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYP 70 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNE 123 L A+A +V T+ARSR L P+L P + +AA+ ++FG+ER GL N Sbjct: 71 DLATAVADLHYIVATTARSRFLAKPVLAPDTAVTEIAERQAADLRCGVLFGKERTGLENS 130 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175 ++ + +P ++SLNLA +V + AYE R L G + + Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190 Query: 176 PYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234 +L FY HLE L GF ++N +R +F R P QE+ LRG++A Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250 Query: 235 SIEQ 238 + + Sbjct: 251 ILRR 254 >UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria RepID=Q02AK8_SOLUE Length = 252 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 7/241 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 N+R+VLV T + N+G+ ARAM G + L +V P +A A GA+ ++ A Sbjct: 18 NNLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREA-RSAVGAAPLLQKAEE 76 Query: 63 VDTLDEALAGCSLVVGTSARS-RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 ++ A+A C LVVGT++ R L P+ + PVAL+FG E+ GL+ Sbjct: 77 FPSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLS 136 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 NE+L CH+ + I + S+NL AV + YE+ E+ Sbjct: 137 NEDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYELAR-----DPKAALASPEKIRSANAG 191 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 +LE+ L + L +G++ K+RRL R ++ ++ G+L I + + Sbjct: 192 ELEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQILWKLE 251 Query: 242 G 242 Sbjct: 252 N 252 >UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria RepID=B8EQU7_METSB Length = 281 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 13/249 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ------AIALAAGASDVIGN 59 I+LV N+G ARAM GL++L LV+P A A AAGA ++ Sbjct: 18 AIILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEG 77 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118 A + DT +EA+A + V T+AR R P+L P E ++A A ++FG ER Sbjct: 78 AKLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERT 137 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL+N+E+ + NP Y+SLNLA AV +I YE A +T+ V +P Sbjct: 138 GLSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYEWMRA--STEAKAPFVADPRSPPA 195 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASIE 237 + + F+ +LE L GF R VM + ++ +F R +Q+++ LRG +I Sbjct: 196 PREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRG---AIV 252 Query: 238 QQNKGNKAE 246 + +G +AE Sbjct: 253 RLVEGPRAE 261 >UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPH4_NATPD Length = 264 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 10/238 (4%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGN 59 + NI + +V GN+G++AR+MK GL+ L+LV+P PD +A A A DV+ N Sbjct: 1 MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDP--RECGLKSVAEAANTPVALVFGRER 117 A V+ V T+ + + P L + V +VFGRER Sbjct: 61 ATEVE-FSYLTEQFYTVACTATTNEDATKHVRYPFIEPAALSDELAGLDADVCIVFGRER 119 Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177 VGLTN+EL + +I A+ +Y LNLA A ++ YE+R + ++ +Q Sbjct: 120 VGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTVEETQHPKQAHER---- 175 Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 ++E + + L G E + RRL RA P +E LRG+L Sbjct: 176 ADEHEIEGLHETFSEYLHEVGH-PEEKIPKTERLFRRLAGRASPTGREARTLRGVLRR 232 >UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus RepID=A9WAF6_CHLAA Length = 239 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 5/243 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + +I ++L + N+G+V RAM G +L LV+P + A+A V+ N Sbjct: 1 MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGL 120 + L EA+A +VGTS R D R+ ++ AA PVA++FG E GL Sbjct: 61 VHAHLSEAIADIRYLVGTSDRPHPGLPWRNDVRQWANETRQRAASTGPVAILFGSEGNGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + +EL C + + +Y LNLA AV ++ YE++ E + Sbjct: 121 SRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQVTTPLAPPPPPGEP----PATL 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 E Y + + T F++ + +LR + RA ++ +L +L + ++ Sbjct: 177 AARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREVLRKL 236 Query: 241 KGN 243 + Sbjct: 237 ERR 239 >UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae RepID=Q1DAL2_MYXXD Length = 243 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 5/240 (2%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 + + +VL +T T N+G+VAR M G + L L P++K A LA + V+ + Sbjct: 5 EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 L EAL C VGT++R++ +L P E + E+ VALVFG E+ G+++ Sbjct: 65 TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 E+L +C +AI + S+NLA + V+ Y L EE P + Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLT-----PTAAVEEAPGAKLGT 179 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 L + +L F+ P V+N+L + RAR +E + +E+ Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQREAELWLTAFKHLERAVTR 239 >UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E490 Length = 236 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 10/232 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M G+++L +V +++AI + ++ NA I + Sbjct: 8 ISVVLVEPKYQGNIGAVARSMANSGISDLRIVKT--PIETEAIYRSMHGRYILDNAKIFN 65 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123 +L EA++G ++ GTS S++ P VALVFGRE GL E Sbjct: 66 SLKEAVSGFEIIAGTSDISKSGEKFRRVPTGPEEFWSTNGLTGQKVALVFGREDNGLNYE 125 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL C++ + I NPEY NL+ AV +I YE+ A + D + Sbjct: 126 ELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEMIKANYSGNATITH------DLIGRDKI 179 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 + G LE+ L + E +MN L R+ RA E + GI+ Sbjct: 180 DTLAGRLEELLAKIDY-NEQEIDTLMNMLNRIIARANITDSEFFKIMGIMRQ 230 >UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma RepID=Q9HJF9_THEAC Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 16/245 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 +N+ IVLV + GN+G+VAR+M GL +L ++ PD +A A + G ++ NA I Sbjct: 49 ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGNR--PDDEAFARSMGGRFILENAEI 106 Query: 63 VDTLDEALAGCSLVVGTSAR----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 D ++ +++ TS+ + L P + + +ALVFGRE Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLPLTPEKFWEEM--SDQGGKIALVFGREDD 164 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GL NEE++KC+Y + I NPEY NL+ AV +I Y V EN E E P Sbjct: 165 GLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIE----P 219 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 +DL ++ + + T + E+ LRRL R+R +E + G++ +++ Sbjct: 220 DHEDL--MLRNIIEVMRLTSY-PEHKIRNTELLLRRLIARSRMSDREYFRMMGVIRRVKE 276 Query: 239 QNKGN 243 + Sbjct: 277 SLQRP 281 >UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RXM1_THEPD Length = 257 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 10/246 (4%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + + + + VE + N+G +AR+MK L L+LV P ++ A A+D++ NA Sbjct: 12 LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 IV +L E + LV T+ P AE+ + + +V GRE GL Sbjct: 72 VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGEMASLFAESTGSKL-VVIGREDWGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + EEL C V I ANPEY SLN + A ++ YE+ + + Q++ E+ Sbjct: 131 SAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLERPP--------R 182 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 +++E F HL G+ E +++ ++RL R +L IL G++ + Sbjct: 183 EEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLVRDSLETI 241 Query: 241 KGNKAE 246 K E Sbjct: 242 KRTHRE 247 >UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Methanomicrobiales RepID=A7I6L8_METB6 Length = 261 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 23/245 (9%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + I IVLV + GN+G AR MK G T L LV+P +A A+ A DV+GNA Sbjct: 1 MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDPC-PLGEEAKGRASHAQDVLGNAE 59 Query: 62 IVDTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 I T+++ A S+VV T+ + + P PRE + V+++FGRE Sbjct: 60 IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRELRERIGIA--EGRVSILFGRE 116 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL N+E+++ I + EY +NL+ AV ++ YE+ + Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYEL-----------ANLPSAPYR 165 Query: 177 YPLVDDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILAS 235 ++ Y H+++ L + M +RR+ RA S+E + + G+L Sbjct: 166 LATPYEMGHLYRHIDRFLDSVH--HPAFKRENTMIMIRRILGRACLTSREASTVHGLLRR 223 Query: 236 IEQQN 240 E Sbjct: 224 TEWHV 228 >UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6J8_DESK1 Length = 234 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 14/243 (5%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +RIVLV N+G +AR + L++V P+ +A+ AA D + A + D Sbjct: 2 LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKPVASI-EEALNYAARGKDFLLKARVTD 60 Query: 65 TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +LDEA+ G +V TS + +D K VA++FGRE GLT Sbjct: 61 SLDEAIKGVDMVAATSDEGYSAGDMLRQAVDLNGFAEKIF--PRTRSVAILFGRESTGLT 118 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EE+ K V I ANP Y +LN++ AV ++ +E+ T N P + Sbjct: 119 REEISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIP-------PLASKE 171 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 L + L + E + RR+ +A +E +LR L + + Sbjct: 172 TLRQLLD-LTVEISKLVMTTEEKITRSRILWRRILGKALLTEKEAALLRYWLQRVRRHIS 230 Query: 242 GNK 244 NK Sbjct: 231 SNK 233 >UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30 Tax=Enterobacteriaceae RepID=C9XV28_CROTZ Length = 239 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 102/241 (42%), Gaps = 16/241 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + I+LV + N+G+ ARAMKTMG T L +V D A +A GA D++ N Sbjct: 11 LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120 DTL AL V T+ARSR P++ +AA PV ALVFGRE GL Sbjct: 71 RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL + +Y SLNL AV V Y++ T P Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLTALMQNTPTAA--------PQADQ 182 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQ 239 L+ ++ L G + + R E ++ +L +L IE++ Sbjct: 183 QQLKALRLRIDALLTTLGVEDDLKMADWLQ------QRLGLLEQRDTAMLHRLLHDIEKK 236 Query: 240 N 240 Sbjct: 237 V 237 >UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae RepID=Q1QMV4_NITHX Length = 410 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 5/241 (2%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++LVE N+G ARAM LT L +VNP P+ A AAGA ++ + + D Sbjct: 17 TVILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFD 76 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVGLTNE 123 T++ A+A C+L++ T+AR+ P++ P ++ AA V ++FGRER GL NE Sbjct: 77 TVEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNE 136 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 E+ + NP ++SLNLA AV ++ YE L T+ E + + Sbjct: 137 EVAMADRIITYPVNPGFASLNLAQAVLLMGYEWFK--LVTRAALPFAMPERSERASQHQM 194 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKG 242 + F+ +L L F+R M LR +FTR P Q+++ L G++ +I + KG Sbjct: 195 QAFFDNLVSELDKVEFLRPAEKRDTMLVNLRNIFTRMEPTKQDMHTLHGVVMAIAEGRKG 254 Query: 243 N 243 Sbjct: 255 P 255 >UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus marinus F1 RepID=A3DMM1_STAMF Length = 231 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 14/240 (5%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 +R+VLV + N+G +AR G+ L+LV P +A+ AA ASD + A IVD Sbjct: 3 VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADL-EEALRYAAKASDYLKKAIIVD 61 Query: 65 TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 L +A+ LVV T+A+ + + R+ +A++FGRE GLT Sbjct: 62 DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVEMVKGRV--NRLAILFGRESTGLT 119 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 +EL+ V I ANPEY LNL+ AV V +E+ EN P D Sbjct: 120 RKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEIWNIRGVRAENIP-------PSAGRD 172 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 ++E F L + +++ ++M +++ R+R E +L L + + + Sbjct: 173 EIE-FILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLGKLE 231 >UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO Length = 235 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 10/228 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I +VLVE + GN+G+VAR+M GLT+L +V D A A ++ NA I + Sbjct: 7 ISVVLVEPKYQGNIGAVARSMANSGLTDLRIVKT--PIDEDARRRAMHGLYILDNARIYN 64 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123 + D+A++G ++ GTS S++ P N VALVFGRE GL N Sbjct: 65 SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFWDNYGLNGKRVALVFGREDNGLNNY 124 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 EL KC++ + I NPEY NL+ AV +I YE+ + E Y + Sbjct: 125 ELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEMIKRVYSGNI------IESNNYISPEHF 178 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231 E+ L G+ + ++ RR+ R+ E + G Sbjct: 179 NIMINRFEELLNLLGYEKP-KVDKLSVMARRIAARSNITDAEYFKIMG 225 >UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BNA8_HYPBU Length = 239 Score = 182 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 16/243 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 +R+V+V N+G +AR + +LV+P+ P S+A AA ++ Sbjct: 7 PRVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVI 66 Query: 62 IVDTLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +VD+L+EAL G L V TSA+ + + PRE + VA+VFGRE V Sbjct: 67 VVDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFAEEI--APRYESVAVVFGRESV 124 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 GLT +EL KCH V I ANP Y LNL+ AV ++ YE+ ++ E Sbjct: 125 GLTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYELYNTRRGEKQLHE--------PA 176 Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + LER Y HL + QV L+ + R E ++L + + Sbjct: 177 RGETLERIYEHLSWLAEKL--VDRERVSQVKAALKHILWRCSITGGEASMLYYFAKKLRK 234 Query: 239 QNK 241 + + Sbjct: 235 RLE 237 >UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Q0_DESAH Length = 226 Score = 182 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 3/220 (1%) Query: 27 TMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRT 85 MGL L +V P ++A A A+ ++ I TL +ALA VVGT+AR Sbjct: 2 NMGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLGG 61 Query: 86 LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNL 145 + PR L+ N VAL+FG E GLTN E+ CH + I +SSLNL Sbjct: 62 QRL-VESPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIPTLG-FSSLNL 119 Query: 146 AMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHP 205 A AV ++ YE+ +A Q + + V +LE Y L L G++ +P Sbjct: 120 AQAVVIVCYELLVAVEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVNPENP 179 Query: 206 GQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245 +N++R+ +R + ++ E I++G++ I + Sbjct: 180 DFWLNRVRQFLSRIKIQAGETGIVKGVIDRIVAYGESRYQ 219 >UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28473_ARCFU Length = 226 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 13/234 (5%) Query: 9 LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68 LVE N+G +AR K G+ L L V ++ AA A DV+ NA +V+ L E Sbjct: 2 LVELKIPENVGFIARVAKNYGIKRLCLYKCRV--TEESYHTAANAKDVLENAVVVEDLQE 59 Query: 69 ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128 L +L+VGT+ L + + A VA++FGRE GL NEEL+ C Sbjct: 60 FLQRMNLIVGTTGIPGGDYK-YLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMC 118 Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYG 188 H V + + EY +N++ A VI Y +R E+ D+E Sbjct: 119 HVLVRVPTSEEYPVMNVSHAAAVILYFLREIER---------VQEDDEIATFRDIEVTLS 169 Query: 189 HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 +L + L + E+ + + RR+ RA + E++ L I K Sbjct: 170 NLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKR 222 >UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba RepID=B0EAZ5_ENTDI Length = 350 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 11/239 (4%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 I +VLV H N+G+V R G+ L++VNPL K ++I ++ + I A I Sbjct: 96 KISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVIC 155 Query: 64 DTLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 ++L+E C+L+VG +AR + ++ +E G + LVFG E GL Sbjct: 156 NSLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAGDMLST--MKGCLGLVFGNESNGL 213 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 EE C I Y LNL+ AV + + M +G + E + Sbjct: 214 NTEECDACDLLNKIDIRSHYPVLNLSHAVGIALNYMHMRLR----DGGDLVPEGCKENIA 269 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 + ++ L + + E + +++L R +E L G ++ Sbjct: 270 KEKGELLEQWKEILHSV--MNEQREIGAVESMKKLLGRVMLTEREAAALDGAFKALLHH 326 >UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIE5_9BACT Length = 278 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 7/234 (2%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 I ++LVE + GN+G++AR M ++L +V + + + LA + +++ N + Sbjct: 7 FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKVPEKND--FYLAMHSEEILENVN 64 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 I TL++A+ G V+ S R P + K V ++ + LVFGRE GLT Sbjct: 65 IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 + E + C ANP + SLNLA AV + +E+ ++ G++ Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYY----NSASGK 179 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 +L+ ++ + + GF + L ++ + P+ L LR + Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMFNR 233 >UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ3_9BACT Length = 240 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 9/239 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ + ++L N+G +ARAM G ++L + A+ A ASD++ NA+ Sbjct: 1 MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +T +E ++ +V+G + RS + S + V L+FG E GL Sbjct: 61 HPETFEELISTSDVVIGFTPRSPFSTNNLPYEELKDFVSETVSTGLKVGLLFGNEASGLN 120 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 N+EL C + V++ + +Y S+NLA AV V ++++ + E + E Y + Sbjct: 121 NKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK--------DIEPDKEAEAEYADRN 172 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL-ASIEQQ 239 + ++ L + + +P + ++R++ R +E ++ + SI + Sbjct: 173 TIGTLLQRIKDHLELIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFGKSISRY 231 >UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67P01_SYMTH Length = 257 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 10/251 (3%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L + +VL + N+ ++ R M GL++L LV P + +A +I Sbjct: 8 LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 TL+ ALA C L +GT+ R R +L PR + +A VA++FG ER GL Sbjct: 68 RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP----- 176 N L CH + I +P SLNLA A VIAYE+ MAW + Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAWTQPNDGPAHRPPAAAAPPDAT 187 Query: 177 --YPLVDDLERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGI 232 + E + +++ L A + +LR L RA+P +E L + Sbjct: 188 ESLATGAEREALFAAVDELLSAL-YPGGSPGRRSSAAARLRALLLRAQPRREEARALTNL 246 Query: 233 LASIEQQNKGN 243 L + + + Sbjct: 247 LRHAARTGRRS 257 >UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae RepID=Q1D9N7_MYXXD Length = 240 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 9/242 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 M+ +R VL+ + N+G+ ARA+K GL++ V P V+ A LA A DV+ A Sbjct: 1 MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 DTL+EA+A C VVGTS+R + L PR G + VA A PVALVFG ER GL Sbjct: 61 RRADTLEEAVADCVWVVGTSSR-KVEGKRRLPPRAVGEELVARAPQGPVALVFGDERSGL 119 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TN E+++ H A+ PE S+NLA AV + AYEVR+A L Sbjct: 120 TNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAMLEAAATPPGPLPA---AATD 176 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILRGILASIE 237 +L + LE L GF+ + PG+ +R LF R+R +E + L S+ Sbjct: 177 AELAQVESTLESVLTTGGFLVDAQPGRT--AVRDLFAPLRRSRLTRKEARLWLAALHSLR 234 Query: 238 QQ 239 ++ Sbjct: 235 KR 236 >UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae RepID=D2PC46_SULIS Length = 237 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 16/236 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IR+VLVE N+G VAR + + L++VNP S+A +AG + + A IV+ Sbjct: 2 IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 DEA+ + + TS+ + +L + ++ VALVFGRE VGLT EE Sbjct: 61 NFDEAINDVDIKIATSSIADNNG-DILRKSIRPWELLSLIQGKKVALVFGRESVGLTREE 119 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET--------- 175 + KC + + I ANP Y LNL+ AV ++ YE+ +++ Sbjct: 120 IFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQSIKLIDRYAE 179 Query: 176 ----PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227 DD + Y L++T++ G E +++ LR+L+TR +E+N Sbjct: 180 ILYKMLKRSDDDYKMYIALKRTIIK-GVKDEEEARVIVHFLRKLYTRIIHNEKEMN 234 >UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10 Tax=Halobacteriaceae RepID=B9LNN3_HALLT Length = 290 Score = 169 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 16/237 (6%) Query: 15 TGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGNAHIVDTLDEALAG 72 GN+G++ARAMK GL++L LV+P K D +A A A DV+ NA V T DE +A Sbjct: 49 PGNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVAN 107 Query: 73 CSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 VGT+A + +P P E A P A+VFGRE GL NEEL + Sbjct: 108 -YHTVGTTAITGEDDQSHERFPFKTPVELRESLKTVDA--PTAIVFGREGRGLNNEELSQ 164 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFY 187 +I A+ +Y LNL A V+ YE+R + + + D+ERF+ Sbjct: 165 LDEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP----DVERFH 220 Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244 L ATG RE+H + +RRL RA P +E++ L G + + Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTFRKANVKLEHAD 276 >UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas RepID=A0KMM3_AERHH Length = 230 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 14/240 (5%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLV + N+G+ ARAMKTMG + LV V + +A +A GA +V+ A Sbjct: 2 KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 DTL+EALA LVV T+AR R L P E + A+ + VA+VFG E GL+NE Sbjct: 62 DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +L + + Y SLNL A+ + AYE+ + E V+ + Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYELSQLLDEPEVLAENVD-------NAGQV 174 Query: 184 ERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 + L G ++ Q M+++ ++LN+L + + ++ Sbjct: 175 RVLKSKTAEILGDLGVSQDEKLHQWVMDRV------PMLPQRDLNMLHLLCKDLARKLGK 228 >UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97 Tax=Enterobacteriaceae RepID=LAST_ECOLI Length = 228 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 96/239 (40%), Gaps = 16/239 (6%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 I I+LV + N+G+ ARAMKTMG ++L +V+ + +A G+ D+I N + Sbjct: 2 RITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122 TL E+L V T+ARSR P E + + + ALVFGRE GLTN Sbjct: 62 PTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 EEL + +Y SLNL AV V Y++ ++ Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDAT--------ADQHQ 173 Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQN 240 L+ L + + R E ++ +L +L IE+ Sbjct: 174 LQALRERAMTLLTTLAVADDIKLVDWLQ------QRLGLLEQRDTAMLHRLLHDIEKNI 226 >UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG9_ELUMP Length = 225 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 11/234 (4%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 I I+LV+ + N+G+ ARAM GL++L + P+ + A GA D++ A I D Sbjct: 2 ITIILVKPRNPNNIGASARAMANFGLSDLRIAG-AHIPNLEEAQAAVGAEDLLKKAKIFD 60 Query: 65 TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 L +ALA C+ TS ++R ++ +A+VFG E+ GL+ + Sbjct: 61 NLQDALADCNFAFAATSLKNRNTQKEIVSLP----NINNHIKRGKIAVVFGSEKTGLSVK 116 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183 +++ C + I + S+NLA AV ++ YE +N + ++ ++T P D+ Sbjct: 117 DIELCDAVLNIPTTTKQPSVNLAQAVNLVCYETAK-----TKNFKTLKQQKTNLPSFKDI 171 Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 + + + F +E ++ + + ++L I++ L ++ Sbjct: 172 DLLTADILELFDRKEFKKELTKTDRELLIKNILKSSSLSKKQLFIIKKFLNLLK 225 >UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=B4UHH1_ANASK Length = 269 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 20/257 (7%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----------------LVKPDSQA 46 IR+VL N+G+ AR MK GL+ L +V P ++A Sbjct: 5 KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64 Query: 47 IALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN 106 +A ASD++ A I L A+ + V GT++R+ P L+PR + V +A+ Sbjct: 65 RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRA-VEGRPWLEPRGLAAELVRRSAD 123 Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 VA+VFG ER GL++ EL+ C I Y S+NLA AV V+AYEV A Sbjct: 124 GEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGAA 183 Query: 167 GEQVEHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224 + ++ +E + + L A G++ +P ++ RRL RA P + Sbjct: 184 PAEAPPGRGGDAPARIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPTQR 243 Query: 225 ELNILRGILASIEQQNK 241 E+ +L G L S+++ + Sbjct: 244 EVELLLGALRSLDRVLR 260 >UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ Length = 209 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 10/218 (4%) Query: 25 MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSA-RS 83 M G+ +L LV + D A + ++ N DTL+EALA C + + TS + Sbjct: 1 MVNFGIDDLALVKGC-EIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIKP 59 Query: 84 RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSL 143 P+ AL+FGRE GL EL C + I NP++ L Sbjct: 60 EGDKRWFRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNPKFPIL 119 Query: 144 NLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIREN 203 NL+ AV ++ YE+ +G ++ ++ ER + L T + R Sbjct: 120 NLSHAVGIVLYEIYR-------DGNHKNPKKRKAVSNEEFERLVDRIMDLLEETSYPR-R 171 Query: 204 HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241 + LRRL +R P+ E L GI +I++ + Sbjct: 172 RLDRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209 >UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4 Tax=Moraxellaceae RepID=Q4FSH9_PSYA2 Length = 298 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 130/276 (47%), Gaps = 41/276 (14%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 L +I++V+V T+ N+GS ARAM TMGL+ L +V P + D+ +++ AAG SD++ +A Sbjct: 24 LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-------------P 108 I TL+ A+A C LV S+RSR LP P++ P + + Sbjct: 84 IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143 Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 +A++FGRE GLTNEEL YH+ I ANP Y LN+A AVQVIA + A Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFIF--AYAQTHIKA 201 Query: 169 QVEHEETPYPLVDDLERF---------YGHLEQ-----------------TLLATGFIRE 202 E P + D LE ++ ++ Sbjct: 202 NSEANNNPLEVTDSLETLGQPMLNTYTRQQWDEPAITQQQLQQLTERTTALMVQHKLADS 261 Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238 + + ++L RL +R + + +E ++ ++A + + Sbjct: 262 ENLKSLPSRLSRLGSRIQLDQKEYQLISALIAKLAK 297 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 162 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 17/164 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 I+L E + N+GS+ R + G + + + ++ AI +AGA I A Sbjct: 93 DPFLIILDEITDPHNLGSIIRTAEVAGCHGVIIPKHRACEVNATAIKTSAGAVFNIKIAR 152 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T++ + G E P+ LV G E Sbjct: 153 VTNITTTINYLKEHNIWIYGACG-------------EASQTHTQANLKGPIGLVIGNEGK 199 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 G++ + C + I + SLN + A ++ YE+ Sbjct: 200 GISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQRYE 243 >UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQC6_FIBSS Length = 269 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 13/240 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNA 60 ++ R+VLVE H N+G VARAM L L++V P K ++ AA + D++ NA Sbjct: 1 MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYPKRDKVLDKSYHTAANSHDILDNA 60 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +V ++A+ CS V A SR + + S + +ALVFGRE GL Sbjct: 61 KVVHKFEDAIGDCSCAV---AYSRRIFASSIKHTMVQNLSDMLPEDGTIALVFGRESCGL 117 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----AWLATQENGEQVEHEETP 176 EE+ C Y I SLNL AV + YE+ A + ET Sbjct: 118 ALEEVNACTYQCEIPVPGLM-SLNLGQAVSISLYELCRSGALANGEGRAKRTTRGVAETG 176 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + ++ F L++ L + + + L L R P EL+ L G+L ++ Sbjct: 177 PATIQQIDGFKKFLDRYLTG----QYHDQAWRDSFLNTLLQRLHPTRNELSALFGLLRNL 232 >UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT47_TERTT Length = 233 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 17/233 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 + +LV + N+G+ ARAMKTMG L LV + D +A +A GA D++ +A Sbjct: 2 LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L L++GT+AR R L P E + + + LVFG E GL+N++ Sbjct: 62 DLASLKPDFDLLIGTTARERGSARRYLSPPELNSQLSQQ--SGRSGLVFGCEASGLSNDQ 119 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184 L C + I Y SLNL AV V +Y + E P ++ Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGL--------EDEAPDARQIQ 171 Query: 185 RFYGHLEQTLL-ATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + L T E +M L AR ++L + ++ + Sbjct: 172 HLKNRAAEFLAPHTDSKTEKLSEWLMESL------ARLSDRDLRMAHQLINLL 218 >UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax RepID=Q0VNS2_ALCBS Length = 223 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 4/217 (1%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 +I +LVE + N+G+ ARA+KTMG + L LVNP + A +A ++DV+ A IV Sbjct: 2 DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNPGD--MTAAHWVAHHSNDVLEQAMIV 59 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTN 122 D+L +AL L +G +AR R +D C + + VA+VFGRE GLT Sbjct: 60 DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCAALVAGKGNSVQRVAIVFGREASGLTG 119 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 +EL C +I + SLNLA AV + A+E+R + T + Sbjct: 120 DELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELRKQPAVKITEPDPATFSHTRQAVHQQ 179 Query: 183 LERFYGHLEQTLLA-TGFIRENHPGQVMNKLRRLFTR 218 L + + L + + + +R+L R Sbjct: 180 LASLHIQPNENLHQWVDELLPLANDRELGLVRQLLRR 216 >UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ Length = 232 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 13/241 (5%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA--H 61 + + VE N+G++AR K L+L+NP V +A +A A D++ A + Sbjct: 2 RVIVFFVEPEKVDNIGAMARVCKNFNAD-LYLINPKVDNYEKAFVVAKHAQDLLQKAIEN 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 ++++DEA + VGT+ + + P + + A + + + GRE +GL Sbjct: 61 KLNSIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAERFANSDIKLGIFIGRESIGL 120 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 TNEEL K + V I AN EY LN A +I YE+ N P Sbjct: 121 TNEELSKMDFIVTIPANKEYPILNATHATAIILYELFKHSKEGHVNLA--------LPKK 172 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 + ++ ++++ + +R+L T+ S+E N L G SI + Sbjct: 173 EQIDVLLDYVKKIIDKLPQPDY-RKEYYFIIMRKLITQGIINSREANTLIGFFRSIYENL 231 Query: 241 K 241 K Sbjct: 232 K 232 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 17/165 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 I+L + N+G++ R G L +AGA + + A Sbjct: 93 DPFIIILDQVQDPHNLGAIIRTAYAAGAHGLIYPRKRSADITPVVTKASAGAVNHLPLAK 152 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ + + GT R + PV LV G E Sbjct: 153 VSNINYTIADLKDMGLWITGTDVR-------------GTRPYYSADYKGPVGLVIGNEGK 199 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 G+ + C + V I + E SLN ++A V+ +EV +T Sbjct: 200 GMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRST 244 >UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola RepID=Q73KY3_TREDE Length = 251 Score = 159 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 13/244 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV- 63 I+L + N+G+V R M G ++L + D + + LA AS V A Sbjct: 6 TIILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYP 65 Query: 64 ---DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L EA + CS+++GTS R+ + E + + + LVFG ER GL Sbjct: 66 PTIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCLDLKKFYGGRLGLVFGNERTGL 125 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 +EEL C + V I A ++ S NL+ AV ++ Y + +A + E L Sbjct: 126 IDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIAEKNNPLTEKDNPSIEKNIYLQ 185 Query: 181 DDLERFY----GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236 + + L G ++ L + A + E +I+ L I Sbjct: 186 KASMKMIQENSEQICNYLSGLGLFKKGGKKTNETFFIELLSSAG--ASEFDIMH--LTEI 241 Query: 237 EQQN 240 ++ Sbjct: 242 FKKL 245 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 17/174 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61 + +VL N+G++AR+++ G+ + + S + +AAGA + A Sbjct: 198 NPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAGVTSTVMKVAAGALSTLPVAR 257 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L+ V GT++R + P+ALV G E Sbjct: 258 VVNLNRALEYLKEQGFWVYGTTSR-------------GADPIYSADFQRPIALVVGSEGE 304 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172 G++ + C ++I SLN ++A + YE+ +V+ Sbjct: 305 GISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRPEVDT 358 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 17/162 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 ++L E N+GS+ R + G+ + L + + GA + + A + Sbjct: 152 FIVILDEVEDPHNLGSIVRTAELFGVHGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVT 211 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T++E + G R S P A++ G E G+ Sbjct: 212 NLNSTIEELKEKGIWIYGADIR-------------AEEYSYQVDFGGPCAVIIGNEGRGI 258 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 + ++KC + I + +SLN ++A +I YEV L Sbjct: 259 SKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGRLK 300 >UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SV68_PHYPA Length = 287 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 34/253 (13%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG--ASDVIGN 59 L+ +R+VLV H GN+GSV G+ +A +AA + + + Sbjct: 24 LERVRVVLVSPQHAGNVGSVNPQCDFRGV--------------EAQTMAANVTSRSKLEH 69 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 + DTL EAL CS+ VG + RS L P + + +A+VFGRE G Sbjct: 70 IRVTDTLPEALKDCSMAVGFTRRSGILRIPDTRL---ANLCIPPLDSLNLAIVFGREDRG 126 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--------QVE 171 LTNEEL C + +I + SLNL+ AV V+ + Q + Sbjct: 127 LTNEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLYEQIPHEQAHDPSNYVPIHSTSF 186 Query: 172 HEETPYPLVDDLERFYGHLEQTLL-------ATGFIRENHPGQVMNKLRRLFTRARPESQ 224 ++ +E E L A G +++ +RR+ R P + Sbjct: 187 KNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRMLLRTGPSLK 246 Query: 225 ELNILRGILASIE 237 EL L G L +E Sbjct: 247 ELGFLHGFLTMVE 259 >UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U6V8_MARAV Length = 226 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 97/240 (40%), Gaps = 18/240 (7%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + VLVE N+G+ ARA+ TMG + LWLVN + +A LA G+ ++ NA I Sbjct: 2 KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120 L L++GTSA+ R +P L+SV V ALVFGRE GL Sbjct: 62 PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 NEEL C Y SLNL+ AV + A+E+ + E Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWELSGLARQSNSTPE--------VASD 171 Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240 L LE L A +RL +++ + ++E++ Sbjct: 172 ASLGALRQRLETLLPALE--APADSKLSQWVFQRL---PMLSERDVGFAHTLCGNLERKL 226 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 17/165 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 ++L N+GS+ R G+ + + V + GA + + + Sbjct: 98 VILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNL 157 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T+DE V G A + AA+ P+A+V G E G++ Sbjct: 158 AKTIDELKEHGYWVAGAEA-------------DNATDYRDMAADMPLAIVIGSEGQGMSR 204 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 KC +++ I +SLN ++A ++ YEV +N Sbjct: 205 LVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQVGDNA 249 >UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7Q2_KORCO Length = 246 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 13/247 (5%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 + ++ ++LVE N+G +ARAMK G L +V P+ + +AIA A A DVI Sbjct: 1 MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 I+ TL+EA G L++GT+AR + + + LV GRE +GLT Sbjct: 61 ILTTLEEARRGVDLMIGTTARVSRYS-VERRAIPIRDLLSSISWDAVYGLVLGRESIGLT 119 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 EEL C I ++ +Y +LN+A A +I YE +A+ + E + Sbjct: 120 TEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAF-------KDSSRFEVKPVPRE 172 Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELNILRGILASIEQ 238 E ++ + + G +R+ + + +RR+ R +E + GI+ ++ Sbjct: 173 AREVMIRYIGEVIDLLGGMRDR--ERFLFTMRRMIERTFPCGISEEEASQALGIIKAVRD 230 Query: 239 QNKGNKA 245 K Sbjct: 231 ALARVKG 237 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 17/176 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63 + I++ + N+G++ R + G + L V S + +AAGA + A +V Sbjct: 218 VLIIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVV 277 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L+ + GT A + P+ LV G E GL Sbjct: 278 NLSRALETLKESGFWIYGTVAGKQ-------------TALHQADLREPMGLVIGSEGEGL 324 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 + + C + + I + SLN ++A + YE+ + + Sbjct: 325 SLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQRGFDRPTLSHTASDLRE 380 >UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHK3_BDEBA Length = 261 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 105/254 (41%), Gaps = 18/254 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64 IRIVLV T + N+G+ +RAM MG+ L L++P + +A AA + N Sbjct: 7 IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66 Query: 65 TLDEALAGC--SLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV--------ALVFG 114 + DE + S+ V +AR + D E +A V LVFG Sbjct: 67 SWDEFMKQEPESIKVAFTARDGK-GRQVRDVDEVLKDIADKAPQFQVESDVPYVVHLVFG 125 Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEH 172 E GL E+L+ ++ I + SLNLA A + Y +R W T+ +G +V Sbjct: 126 PEDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRR 185 Query: 173 EETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRG 231 +D LE+ GF + V LRR+ + P +EL IL Sbjct: 186 APQGIDGIDPEATLKTWLEEM----GFDLTRQRKINVFTVLRRMLLQNTPTKKELVILET 241 Query: 232 ILASIEQQNKGNKA 245 +L ++ + K Sbjct: 242 VLQQSIRKLREWKE 255 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 17/158 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + ++L E + N+G++ R+ + G+ + + V ++ + +AGA + + A Sbjct: 95 KPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAK 154 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ + +VGT + PVA V G E Sbjct: 155 VSNINNTIRDLKERGLWIVGTD-------------VNAEKSFEELNYDFPVAFVIGNEGK 201 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 G++ LQ C + V I + +SLN ++A ++ Y+V Sbjct: 202 GVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQV 239 >UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8Q9_IGNH4 Length = 228 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 20/242 (8%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62 +R+VLVE N G + R K + + V P D + + AA D + + Sbjct: 2 KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61 Query: 63 VDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 VD EAL G VV TSA+ S + P E K + LVFGRE VGL Sbjct: 62 VDDYKEALEGL--VVCTSAKVSSADPLRDFVLPWELKEKFGE---PERLTLVFGRESVGL 116 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA-WLATQENGEQVEHEETPYPL 179 T EEL++C + + A+P+Y +NL+ AV V+ +EV + E+ + + L Sbjct: 117 TREELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLAL 176 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 L + L+ E +V ++RL +A QEL L +L+ + Sbjct: 177 -----GVAERLARALIK----DEAKRERVTVAIKRLLAKA--TRQELRNLLYLLSKCANR 225 Query: 240 NK 241 Sbjct: 226 LG 227 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 17/157 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 I+L + N+G++ R+ ++ G + + S +AGA + I + + Sbjct: 87 IILDKIEDPHNLGAIIRSAESFGFDAVIIPERRSASVTSTVYKTSAGAINNIKVVRVTNL 146 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T+ + + G + E V LV G E G++ Sbjct: 147 TRTIKDLKDKGFWIYGLAG-------------EAHSDISHADLRGKVGLVVGNEGEGISR 193 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 + C + I +SLN ++A + YE+ Sbjct: 194 LVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQ 230 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 155 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 17/163 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 ++L E N+GS+ R +G + + V + + GA + I A + + Sbjct: 100 LILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNL 159 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 TL+E VVGT A +R N P+ALV G E G+ Sbjct: 160 ARTLEEMKERGIWVVGTDASAR-------------EDFRNMDGNMPLALVIGSEGKGMGR 206 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 +KC + + + + +SLN ++A ++ YEV E Sbjct: 207 LVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE 249 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 18/186 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + + L + N+G+V R+ + MG L L A +AAGA + + A Sbjct: 382 PPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAGAMEHLPVAR 441 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ +L++ V+G +A E + + P+ LV G E Sbjct: 442 VVNLNRSLEKLKDSGYRVIGLAA-------------EGDVTLMDVDLEGPLVLVTGSEDQ 488 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPY 177 GL+ + C V I SLN ++A + YEV R W+ P Sbjct: 489 GLSLLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRNWMKDIHGQAPSPPIVRPQ 548 Query: 178 PLVDDL 183 ++ Sbjct: 549 MKTQEV 554 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 10/169 (5%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 +VL N+G++ R+ G+ + + V A+ +AGA++ + A + Sbjct: 94 FVVVLDGIEDPHNLGALIRSADGAGVDGVVIPERRAVGVTGTAMKASAGAAEYVPIARVT 153 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + + ++ + + W + N +ALV G E GL + Sbjct: 154 N-IARSIEDL--------KDKYNVWTVGLDERGTQNYDEIDYNMSLALVLGAEGKGLHDL 204 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172 +KC V I E SSLN+++A ++ YEV A Sbjct: 205 VRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQRRAKVAGAGSPGT 253 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 17/159 (10%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 I+L + N+GS+ R +G + + ++ +AGA + + A + + Sbjct: 130 IIILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVPVARVTN 189 Query: 65 ---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 T++ +VGT PVALV G E G+ Sbjct: 190 ISQTIEYLKKKNIWIVGTDL-------------SGEKPFFEADLKGPVALVIGSEGEGMG 236 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 +KC + V I + SSLN A+A +I YE+R Sbjct: 237 RLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQR 275 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 17/177 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + +VL N+G+ R G+ + + V + +A+GA D + Sbjct: 95 PALLLVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATVHKVASGAVDTVPFFA 154 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + TL E +VGT+A + + P+A V G E Sbjct: 155 VTNLARTLRELKEMGLWIVGTAA-------------DAPDTLDSVTLTRPLAWVLGAEDG 201 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175 G+ + C V+I + SLN++++ + +E +G V + Sbjct: 202 GMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQRTGSGLNVPAPKN 258 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 17/160 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 ++L + N G++ R +G+ + + V + + ++GA++ + + + Sbjct: 101 LILDHLTDPQNFGAIIRTADAVGVDGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNL 160 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T+ + ++GT + E N P+ALV G E G++ Sbjct: 161 RQTISKLKEQWIWILGTD-------------IDGDRGIFEENYNIPLALVVGNEASGMSP 207 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 ++C + I +SLN ++A V+ YE+ Sbjct: 208 LVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQKTN 247 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 18/163 (11%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + ++L + N+GS+ R + + + V + GA + I A Sbjct: 109 NPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVSKTSTGAVEHIPIAR 168 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + TLD+ A + GT P +C N +ALV G E Sbjct: 169 VTNLSQTLDKLKARGFWIFGTDMNG--------TPSDCWNT------NGKLALVIGNEGK 214 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 G++ ++ + I N SLN ++A ++ YEV Sbjct: 215 GISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR 257 >UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2 Length = 241 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 8/237 (3%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 + NI VL E N+GS RA+ G L LV P+ + +A + ++ Sbjct: 5 IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 +L EALA S VVG S RSR + P E A AA PVA VFGRE GL Sbjct: 65 ETFASLGEALANVSYVVGFSGRSRGERQAVSLP-EFAPTLTALAATAPVAFVFGREDRGL 123 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 N +++C ++I +P Y SLNLA AV + Y +R + + Sbjct: 124 DNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIRGLATSAEPL------PSPDLADQ 177 Query: 181 DDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASI 236 E L+Q L F R + +R L R+RP E+ ++ I + Sbjct: 178 ASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAICRKM 234 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 11/162 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63 + +VL N+G+ R G+ L + V +A+GA++ + + Sbjct: 99 LYLVLDHVQDPHNLGACLRTCDAAGVKGLVVTKDQSVGLTPTVAKVASGAAETVPVYRVT 158 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L L + W + E P+ +V G E VGL Sbjct: 159 N-LARCLDRF---------KQRGYWVVGAAGEAERTLYELDLRLPLVVVMGAEGVGLRRL 208 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 ++C + + I SLNL++A ++ YEV Sbjct: 209 TRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRSRPAP 250 >UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YEM3_AERPE Length = 243 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 15/244 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61 ++ +RIVLVET N+G VAR + ++LV+P +A AA A+ + A Sbjct: 1 MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASL-EEAKRYAARAAWRLDAAR 59 Query: 62 IVDTLDEALAGCSLVVGTS--ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 +V L+EAL G S + TS R L P E A VA+VFGRE VG Sbjct: 60 VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAEVL--AATPGTVAIVFGRESVG 117 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179 LT E+ C + +I A+P Y SLNL+ A + YEV A V+ E Sbjct: 118 LTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKARRGGAVARGGVDEELIKLLR 177 Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239 LA+ + +V L R+ +++ +E+ L +L+ + Sbjct: 178 A----------YAAALASRLVHRERAEEVAVSLVRIASKSVMARREVENLIYLLSKACRA 227 Query: 240 NKGN 243 +G Sbjct: 228 VEGC 231 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 17/178 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 + +V + N+G++ R + +G L + S + +AAGA + + Sbjct: 198 DPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQRRASGITSTVMKVAAGALENFTVSR 257 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L+E + GT+A P+ LV G E Sbjct: 258 VVNLSRALEELKEAGFWIYGTAA-------------SGSEPVHTVNFKGPIVLVIGSEGE 304 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL + C + V+I + SLN ++A + YE+ ++V+ Sbjct: 305 GLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQRSLNTLYLDKVQKISLK 362 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 17/160 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 I+L E N+GS+ R ++G + + V + GA + + + + Sbjct: 102 IILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNM 161 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T++E + GT A+ + P+A+V G E G++ Sbjct: 162 VRTMEELQKRGLWIFGTDAK-------------GSSDYRTMDVDMPLAIVIGSEGFGMSC 208 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 +KC + V + + +SLN ++A ++ YEV Sbjct: 209 LVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKRFP 248 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 11/158 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIV 63 + +VL GN+G+V R G + L S A G+ + V Sbjct: 119 LIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITGV 178 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + A + R + + +PVA+VFG E G++ Sbjct: 179 AEQEVA----------AFLERQGIRLLATALDSSSLYHDVDLRSPVAIVFGNEGAGVSKV 228 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 L+K + I SLN+A+A VI YE R Sbjct: 229 ILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQRR 266 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 17/165 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 I+L N+GS+ R G+ + + V + GA + + + Sbjct: 98 IILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNL 157 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T+DE + GT A A+ + +V G E G++ Sbjct: 158 SKTIDELKDNGFWIAGTEA-------------NNATDYRDLQADMSLGIVIGSEGQGMSR 204 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 KC +H+ I +SLN ++A ++ YEV +E Sbjct: 205 LVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRKRHQLEEKS 249 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 17/163 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 ++L N+GS+ R G+ + + V + GA + + + + Sbjct: 98 LILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNL 157 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T+DE V GT A A+ +A+V G E G++ Sbjct: 158 AKTIDELKDNGFWVAGTEA-------------NNATDYRNLEADMSLAIVIGSEGQGMSR 204 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 KC +++ I +SLN ++A ++ YEV E Sbjct: 205 LVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHDVGE 247 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 152 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 17/172 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + + + N+G++ R + +G L + V S +AAGA + A +V Sbjct: 220 VLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVGITSTVAKVAAGALEHFAVARVV 279 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L++ A + G +A + + PV LV G E GL Sbjct: 280 NLNQALEQLKAAGFWIYGMAA-------------TAAKPIYSVEFSGPVVLVVGAEGTGL 326 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172 + + C V+I + SLN ++A + YE+ +T +H Sbjct: 327 SLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSSTSVRQPLPQH 378 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 17/157 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65 I+L + N+G++ R+ ++ G + + +AGA + I + +T Sbjct: 92 IILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASVSPIVYKTSAGAINNINIIMVKNT 151 Query: 66 ---LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 ++E V G + E V L+ G E GL+ Sbjct: 152 NRAIEEIKEAGFWVYGLAG-------------EASSPIDQVDLKGKVCLIVGNEGKGLSR 198 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 + C + I +SLN ++A + YEV Sbjct: 199 LVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQ 235 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 10/157 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63 + ++L N+G++ R+ + G + L P ++ AI +AGA++ + + Sbjct: 97 LLVILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVT 156 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L A+ R + L P+ALV G E GL Sbjct: 157 N-LARAIEQLQ--------QRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRL 207 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 ++C AI SLN+++A V YEV Sbjct: 208 TRERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQR 244 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 17/161 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + I I+ GN+G++ R G + ++ +N V + + + + G+ I Sbjct: 105 KGIYIIADNIQDPGNLGTIIRTADAFGASAIFTINNCVDVFNPKVLRASMGSIFHIPVIV 164 Query: 62 IVDT-LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 L + V T ++R L + VA V G E G+ Sbjct: 165 TASQILLKLKQRGIKVFATHLKARKL-------------VHECNISDKVAFVLGNEAKGV 211 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 + + V I E SLN+++A + YE + L Sbjct: 212 S--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQRQRL 250 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 17/185 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + + + N+G++ R+ + +G + + V S ++AGA + I A ++ Sbjct: 191 VIVAADGITDPHNLGAIIRSAEAIGAQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVI 250 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L+ + + G +A E + PV LV G E GL Sbjct: 251 NLGRALEYLKSNSFWIYGLTA-------------EAAQSIHTTDFSAPVVLVVGAEGSGL 297 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180 + C V+I + + SLN ++A + YE+ + + + Sbjct: 298 SLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYRQTWIDKLPVLTRKKLQKGSVEA 357 Query: 181 DDLER 185 LER Sbjct: 358 SKLER 362 >UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii RepID=A8J9D1_CHLRE Length = 154 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 2/153 (1%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64 ++LVE N+G+ ARAMK GL +L +V P P+ A+A ++ A+D++ A + D Sbjct: 2 AVILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYD 61 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNE 123 +++ A+A V +AR+R + P + ++ + AA P A L+FGRE GLTNE Sbjct: 62 SVEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNE 121 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 E+ + + I ANP Y LNLA A+ ++YE+ Sbjct: 122 EVALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 17/184 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 ++ + L + N+G++ R+ + +G L L +AAGA + + A Sbjct: 269 SSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAGALEHLPVAR 328 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ +L++ VVG E P+ +V G E Sbjct: 329 VVNLNRSLEKLKDEGYTVVGL-------------AEEGSSTLSEIKFQGPLVVVVGSEDK 375 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178 G++ + C V I +SLN ++A + YEV + +G+ Sbjct: 376 GISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVARSKWMRSISGQDPSPRLLKPQ 435 Query: 179 LVDD 182 + + Sbjct: 436 ISSE 439 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 15/162 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + + L + + N+G+ R MG+ + + A +AAG ++ + + Sbjct: 98 LLLALDQVTDPHNLGACIRTAAAMGIAAVIVPRDRSASLTPTARKVAAGGAEKVKFIQVT 157 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + TL A + V + E L + VA+V G E GL Sbjct: 158 NLARTLAHIKAHFFVKVVGTM-----------LDEKALPIQKYDFSGNVAIVMGAEDTGL 206 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 +C V I + SLN+++A + YE L Sbjct: 207 RPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQRLG 248 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 17/168 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + ++L N+G+ R+ G+ + V +A GA+++ Sbjct: 96 PALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTPFIR 155 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+D +VGT E +A+V G E Sbjct: 156 VTNLSRTIDWLQKEGVWIVGT-------------AVEAETLIQEIDLTGDIAIVLGSEGA 202 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 GL ++C + I SLN+++A + YEV+ A + Sbjct: 203 GLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQREAPAPS 250 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 17/162 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61 + +VL + N+G+ R G T + + +A GA++VI Sbjct: 96 PPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVA 155 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + TL++ VVGT+ E + + P+ ++ G E Sbjct: 156 VTNLARTLEKLQQRGLWVVGTAG-------------EAEQEIYQQDLTGPLVMIMGAEGK 202 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G+ + C + V + SSLN+++A V +E Sbjct: 203 GMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQR 244 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 17/165 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64 +VL N+G++ R G + + + A +AGA + I A + + Sbjct: 99 LVLDGIQDPHNLGALIRTAACAGASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNI 158 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 +L++ V G S E A + +ALV G E G+ Sbjct: 159 AQSLEKLKRSGYWVYGLSG-------------EADASLYEVAFSGKIALVIGGEGEGIRP 205 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 ++C V+I SLN ++A + YEV + Sbjct: 206 LVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVARCLRGEKPGR 250 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 149 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 11/157 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + ++L E N+G++ R +G+ + + VK ++ GA D + A + Sbjct: 92 LFVMLDELEDPHNLGAILRTCDCVGVDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVT 151 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L + L G + W + + + P+ LV G E G++ Sbjct: 152 N-LAQTLKGL---------KKEGFWVAGADFDNSQDYRQASYDMPLVLVVGSEGFGISPL 201 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 + C + V + SSLN ++A V+ Y++ Sbjct: 202 VKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQR 238 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 149 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 17/162 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61 + ++L + N+G+ R MG + ++ +A GA++V+ Sbjct: 95 PPLLLILDGVTDPHNLGACLRVADAMGAHAVIAPKDRSATLNATVSKVACGAAEVVPYIT 154 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + TL + + GT+ E A+ P+A V G E Sbjct: 155 VTNLARTLRDLKDAGVWIAGTTM-------------EADTDLYHFDASGPLAWVMGAEGE 201 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G+ + C V+I SLN++++ ++ E R Sbjct: 202 GMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 149 bits (377), Expect = 9e-35, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VL GN+G++ R G + L V P + + A S N VD L Sbjct: 106 LVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVTSVDLL 165 Query: 67 D---EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + E V GT+ A VALV G E G+ + Sbjct: 166 EKLPELKEDGFHVYGTALSK-------------ATSYEQVAFEEKVALVIGNEAQGVHAD 212 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 L C V I + SLN A+A ++ Y + + Sbjct: 213 VLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 15/159 (9%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIVDT 65 +VL GN+G++ R +G + L+ + + + G+ + V T Sbjct: 114 LVLDRIRDPGNLGTLIRTADALGAAGVVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKT 173 Query: 66 --LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 L+E + +A E ALV G E G++ E Sbjct: 174 GELEEWCRQHGYALWATA------------LEGAEDMTRLTWPEKTALVLGSEAEGVSPE 221 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 L V I SLN+A+A ++ +E A+ + Sbjct: 222 ILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAARAFSS 260 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 16/161 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIG--N 59 ++ +VL GN+G++ R+ +G + L V + + G+ + Sbjct: 114 NSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSVDLYNPKTVRSTMGSLFHLPIIE 173 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 A + + L EA + +VGTS + L+ G E G Sbjct: 174 ADLAELLPEAQSKGIKLVGTSL-------------QATHTCYTYDWTAGTWLLMGNESEG 220 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 L++ V I E SLN+AMA V+ YE Sbjct: 221 LSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQR 261 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 12/156 (7%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNAHIVD 64 +VLVE + GN+G++ R G + + LV P A + + GA A Sbjct: 117 WVVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIART-- 174 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 + + L T AR + R A P+ LV G ER GLT+E+ Sbjct: 175 SWPDLL--------TWARQHRIALVGSSDR-GASDYRATTYPRPLLLVLGSERHGLTDEQ 225 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 L C V I SLNLA+A ++ YE + Sbjct: 226 LAACDLVVRIPMRGRSDSLNLAVAAGILMYEATRSQ 261 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 9/155 (5%) Query: 8 VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67 +L GN+G++ R + G+T + + V + + + V+ L Sbjct: 130 ILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYVEDLR 189 Query: 68 EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127 E + + + + + + E A + G E GL E Q Sbjct: 190 ETIH--------TLKEKNIKSYAAHL-DGKNTYDKEDYRQGTAFLIGNEGNGLREEIAQC 240 Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 + I + SLN A+A V+ +EV Sbjct: 241 ADTWIRIPMCGQVESLNAAVAATVLMFEVSRQRRG 275 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 17/162 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + ++L + N+G+ R MG+ + ++ +A GA++ + Sbjct: 95 PPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYIT 154 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + TL E ++GT A V G E Sbjct: 155 VTNLARTLRELKEYGIWIIGTDM-------------SGESDLYHCNLPDSAAWVMGNEGD 201 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G+ + C V+I S+N++++ ++ E R Sbjct: 202 GMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + +VL N+G+ R+ G+T + + V ++ ++GA+D + +V Sbjct: 100 LLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVV 159 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + +L E + G + E A VALV G E GL Sbjct: 160 NLARSLRELQKQDVWIYGLAG-------------EVETSLYALDLRGNVALVLGGEADGL 206 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 + C I E SLN+++A V +E Sbjct: 207 RRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQR 246 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 10/161 (6%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 ++L GNMG++ R+ + G+T + + P + + + + D Sbjct: 122 YLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDD 181 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L + T + + G + +A + G E GL+ Sbjct: 182 L----------IYTIDALKRKGVLIYGAHLDGEELYDTEFPDKIAFLIGNEGNGLSKAVS 231 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 + I + SLN A++ +++YE + ++N Sbjct: 232 DTADRLLRIPMEGKVESLNAAISATLLSYEAMRQRRSARQN 272 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 17/164 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + +VL N+G++ R+ +G + + V+ +AGA + A Sbjct: 128 PPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAVQVTGTVAKASAGAVEHSRIAR 187 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L+E V + + + P+ALV G E Sbjct: 188 VVNISRALEELKEAGLWV-------------AAADVDAKEPMWSARLDGPLALVVGAEGA 234 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 G+ + L+ C + + I + SLN +++ ++ YEV Sbjct: 235 GVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQRGT 278 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 17/168 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 ++L N+G++ R + G+ + + + + + ++AGA + + Sbjct: 94 PPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIR 153 Query: 62 ---IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+T+ V+G A++R + +P ALV G E Sbjct: 154 ENNLVNTIKYLKQEGFWVLGADAKAR-------------QSYFNTSIPSPTALVIGGEGQ 200 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166 G+ + C V I + +SLN ++A ++ YEV L Sbjct: 201 GIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQRLNLLPG 248 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHI- 62 + ++L N+GS+ R+ G++ + + S + GA D + A + Sbjct: 107 LLLMLDNIEDPHNLGSILRSADATGVSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVN 166 Query: 63 --VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 V T + GT+ AN LV G E G+ Sbjct: 167 NLVQTCQALKDRGYWIFGTAMEGDDYRKW--------------NANGKTVLVIGNEGKGI 212 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 + L++ + I SLN ++A V+ Y+ + Sbjct: 213 SPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFNSRHP 254 >UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella RepID=D1BMG9_VEIPT Length = 264 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 9/162 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60 ++ + I L GN+G++ R G+ ++L+ V P + + ++ + Sbjct: 112 IVDGLYITLDGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSA--LHKI 169 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + + + +L + + + + E LV G E G+ Sbjct: 170 PLYEDI-------TLTLLHDMVTESNMTSYVTALEHSNPYHTVRYAKRTMLVLGNEGNGV 222 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 T E + C + I + SLN+++A + Y+V+ ++ Sbjct: 223 TPEVMNLCTNRIMIPMYGDMESLNVSVAAALCMYKVQEQLMS 264 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 147 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 17/160 (10%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63 + + + GN+G++ R G+ + L V ++ + S + Sbjct: 111 DFYLFCDKVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYD 170 Query: 64 DT----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 D + ++ TS E E + L G E G Sbjct: 171 DDEFSLIKSLKKDGFTLIVTSL-------------ESSKDFFKEDLKGKIILTVGNEGNG 217 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 ++NE L V I SLN+A+A +I YE Sbjct: 218 VSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQ 257 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 147 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 11/160 (6%) Query: 2 LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60 + +VL E + N G++ R + G + + + AAGA + + A Sbjct: 105 FAPLVVVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVA 164 Query: 61 HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + + + +AL + W + E + P A+V G E G+ Sbjct: 165 RVAN-VAQALQRL---------KQAGYWIVGADVEAKVPYTEVDYRGPTAVVIGSEGQGM 214 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 ++C + V+I SLN ++A V+ YE Sbjct: 215 RRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 17/165 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNA- 60 + + L E N+G++ R G+T + + V ++ +A GA++ + Sbjct: 93 NPLFLFLDEVQDPHNLGAILRTADATGVTAVVIPKHNSVGVNATVRKVACGAAETVKVVV 152 Query: 61 --HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 ++V T+ E V G + E V LV G E Sbjct: 153 VSNLVRTIKELQQAGLWVTGLAG-------------ETNTTLYQLDFKGAVGLVMGAEGS 199 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 GL + C + AI SLN+++A V+ YEV L + Sbjct: 200 GLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQRLQS 244 >UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria RepID=B0CFB1_ACAM1 Length = 243 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 22/243 (9%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHI 62 +LVE+ N+G+ ARA+ TMG T+L LV P + +A LA G+ V+ A I Sbjct: 2 QFSFILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPI 61 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121 L +AL T+AR R + + RE + A+ VA VFG ER GL Sbjct: 62 YQNLSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLN 121 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181 ++ C I Y SLNLA AV V ++ + + + + TP P ++ Sbjct: 122 RHDIDCCDLITTIPQGNPYPSLNLAQAVMVYSFMLS----ESAVHIKDQRLNRTPMPPLE 177 Query: 182 DLERFYGHLE----QTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237 Y +L+ Q + G + E + V L AR +++L +L I A I+ Sbjct: 178 -----YANLKHSSLQLMERIG-LAERYQKYVTRGL------ARLGTEDLYLLHNIRACID 225 Query: 238 QQN 240 + Sbjct: 226 RTL 228 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 12/157 (7%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61 + + +VL N+G++ R + G+ + + ++ GA I Sbjct: 147 KPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPCIM 206 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + + L AL + R + G + VALV G E G++ Sbjct: 207 VTN-LAAALKDL--------KQRGF--WVYAADANGDSCFEQEFGGSVALVLGNEGKGIS 255 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L + Y V+I ++ SLN+++A ++ YE+ Sbjct: 256 KLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVR 292 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 18/158 (11%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIVD- 64 ++L + N G++ R G+ + + V+ I +++G I + + Sbjct: 93 VILDQIQDPHNFGAIVRTSVAAGVDAIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNL 152 Query: 65 --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 T++ V G G + LVFG E G+ Sbjct: 153 SNTIETLKKENVWVYG--------------ADVEGKPYYEIDWQGKICLVFGNEGNGIRK 198 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 C V+I SLN++++ +I +E + Sbjct: 199 NVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 62/158 (39%), Gaps = 17/158 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63 I +VL + N G++ R+ + G+ + + + V + + GA + + + Sbjct: 88 IVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVT 147 Query: 64 ---DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 D++D+ + G A + + E + LV G E G+ Sbjct: 148 NVSDSMDKLKKYGYFIYGAEA-------------DGETEYYNEPFPEKLCLVLGSEGKGM 194 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 + + C + I + + +SLN+++A ++ E+ Sbjct: 195 RKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISK 232 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 14/165 (8%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAH 61 ++ GN+G++ RA + G + + + P ++A+ +AG+ + Sbjct: 109 PTFIVIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIK 168 Query: 62 I-VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + V ++E ++ L + ++ + + S P+A+VFG E G+ Sbjct: 169 VTVKEIEEFVSKYGLNL------------VITDLKATISSFNMDFTKPLAIVFGNESKGV 216 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 + + H I + SLN+AMA I YE+ Sbjct: 217 SQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQRFLKSP 261 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 17/170 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61 ++L N+G++ R + G + + S +AGA + + A Sbjct: 100 PPFVLLLDGLEDPHNIGALLRTAEGAGAHGVIIPKRRGGAITSTVAKASAGAVEYVPIAR 159 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ + ++G + + PV L+ G E Sbjct: 160 VTNLVQTVGQLKKAGLWIIG-------------SAMDAPRPYFRQDFRGPVGLIVGSEGK 206 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 G++ + C + V+I + SLN ++A ++ YE + + Sbjct: 207 GISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQLQEGVKAPQ 256 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 18/165 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNAH 61 + ++ N+G++ R + G L + + +AGA + + A Sbjct: 106 PPLLVIADSIEDPHNLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVAR 165 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ E A + G A G + P ALV G E Sbjct: 166 VTNLVSTIKELKARGVWIYGADA--------------SGARWDQTDLTGPSALVIGSEGF 211 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 GL+ + C +++ E +SLN ++A ++ YE Sbjct: 212 GLSRLVRETCDALLSLPMRGEVNSLNASVAAGILMYEAVRQRTKR 256 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 17/177 (9%) Query: 10 VETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD---T 65 + N+G++ R+ + +G L L +AAGA + + A +V+ + Sbjct: 290 EGLTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRS 349 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 LD +VG E + N P+ +V G E GL+ Sbjct: 350 LDILKDKGYRIVGL-------------ATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTR 396 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182 + C + I SLN ++A ++ YEV G+ + + Sbjct: 397 RYCDQLIRIPLRGATPSLNASVASALMLYEVARRTWMKDLGGQSPVPQMVRPSIAGQ 453 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 145 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 17/159 (10%) Query: 4 NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62 ++ ++L N+G++ R+ G + L I +AGA+ I A + Sbjct: 95 DLVLILDGILDPHNLGALIRSAHCFGANGIILPERRAASVTGTVIKTSAGAARHIPIARV 154 Query: 63 VD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 + LDE + G AR V LV G E G Sbjct: 155 ANLARALDELKTKGFWIFGADAR-------------ADQSVSDPDYQGAVGLVMGGESKG 201 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L +KC ++I + SLN++++ +I +E+R Sbjct: 202 LRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRR 240 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 18/162 (11%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + I+L N+G++ R + G + L P + A+ A+GA + Sbjct: 134 DPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPVTAAAMKTASGAFAYLPVCQ 193 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 I + TL++ VG P+ +V G E Sbjct: 194 IGNIRQTLEKLKERGFWAVGADMDGG--------------DLYQADLKGPLVIVMGAEGK 239 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G++ + C + V I + SSLN+++A ++ YE Sbjct: 240 GISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQR 281 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 9/150 (6%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 +VL +T+ GN+G++ R + G+T + + V + + + S V+ L Sbjct: 139 LVLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDL 198 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 E + ++ + + A++ G E GL++E Sbjct: 199 KETIKEL---------KKSGISFYATHLKGEKSYKDIKYSGRSAIIVGNEARGLSDEVAD 249 Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156 +V I + SLN A+A ++ YEV Sbjct: 250 LADTYVLIPMQGKVESLNAAVAAALMMYEV 279 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 11/165 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63 + ++L + N G++ R+ + +G + + P + AAGA+ + A Sbjct: 89 LIVLLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSPVVVKTAAGATSYLPVAQ-T 147 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 L + A W E + VALV G E GL Sbjct: 148 KNLPRLI---------DALKEDGVWIYGAAGEAAQDIGRTDLSGKVALVIGAEGEGLRRL 198 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 +KC V I + SLN ++A ++ YE A + + Sbjct: 199 VREKCDALVRIPTRGQVQSLNASVAAGILLYEAARARDKNKSKNK 243 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 17/162 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + ++L N+G++ R G+ + V + ++ GA++ + Sbjct: 44 NPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRVSVGAAEKVPFIQ 103 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ + + + GTS + P ALV G E Sbjct: 104 VTNLARTMKQLQSRGIWIFGTSDKGDRG-------------LYETDFTGPAALVMGAEGE 150 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G+ + C + + I LN+++A V YE+ Sbjct: 151 GMRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192 >UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL7_9EURY Length = 234 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%) Query: 1 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59 M++NI++ VE + N+G AR +K + ++LVNP K + + AI + A D+I N Sbjct: 1 MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60 Query: 60 AHIVDTLDEALAGCSLVVGTSA---RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116 A I+ L+ + S VVGT+A +SR ++ E ++ + L+ GR+ Sbjct: 61 AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRGKSI-ENMTLLIGRD 118 Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176 GL +EEL +C+ V I + Y +LN++ A+ ++ Y + Q+ + Sbjct: 119 NTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLYAL-----TAQKPSSWPQEIGEL 173 Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235 Y DL ++ + +IR V + RA P +E+N L + Sbjct: 174 YADSSDLRMIKSLFGASVDSNPYIR--KKETVKKAFENMLVRANPTKKEINALTAAFSK 230 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 17/160 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + ++L N+G++ R +G+ + + V + ++ GA D + A + Sbjct: 95 LLLMLDGLEDPHNLGAILRTCDAIGVDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVT 154 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + TL++ VVG + N P+ +V G E G+ Sbjct: 155 NLTRTLEDLKKRSFWVVGCDL-------------DKSQDYRQVDYNMPLVIVIGSEGFGI 201 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 + + C +V + +SLN ++A VI Y+V + Sbjct: 202 SRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSR 241 >UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neisseriaceae RepID=B9Z0Z0_9NEIS Length = 264 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 12/160 (7%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 ++L + GNMG++ R+ G+ ++L S + A + + N H Sbjct: 117 CLLLEDIQDPGNMGTILRSAAASGVMEVFLSKGCADVFSPKVLRAGMGAHFVLNLHEAAD 176 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L E L ++ E A+ VA VFG E G++ L Sbjct: 177 LAEVL------------GGFAGRKLVTHLEGSQSLYAQDLRGDVAFVFGNEGAGVSAGLL 224 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165 Q V I SLN+AMA + +E A+ Sbjct: 225 QLADCRVRIPMPGHAESLNVAMAATICLFERVRQLDASAA 264 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 18/165 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 +VL E N+G++ R G+ + + V + +AGA + + A Sbjct: 95 DPFILVLDEVEDPHNLGALIRTADAAGVHGVIIPKRRSVSLTATVAKTSAGAVEHVLVAR 154 Query: 62 I---VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + V TL + V G A G + +V G E Sbjct: 155 VGNLVQTLKDLQKAGCWVSGAEA--------------EGTEVYRSDLTGARVIVIGSEGK 200 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 GL+ + C V++ +SLN ++A ++ YEV + Sbjct: 201 GLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQRGSR 245 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 I+L N+G++ R G + + V + +AGA + A Sbjct: 116 DPFLIILDNIEDPHNLGAIIRTANQAGAHGVIIPKRRAVGLTATVARTSAGALNYTPVAK 175 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+++ V + P+ LV G E Sbjct: 176 VTNLVKTMEDLKKKGLWFVCADMDGDVMY--------------DVNMKGPIGLVIGNEGE 221 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 G+ C + I + SLN ++A V+AYE+ + Sbjct: 222 GVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQRMQ 265 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 55/153 (35%), Gaps = 9/153 (5%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66 ++L GN G++ R G++ + + V S + + S + + I + L Sbjct: 119 VILDCLQDPGNAGTIIRTADAAGISAVLMSKGCVDLYSPKVLRSTMGS--VFHIPIFEGL 176 Query: 67 DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126 + + V+ + + E A++ G E G+++E Sbjct: 177 N--ITEIIRVL-----KQNDYKVIASHLSGKNNYFQEDLTGRSAIIVGNEANGISDETAY 229 Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 V I + SLN ++A V+ YE+ Sbjct: 230 MADSLVKIPMPGKAESLNASVAASVMIYEIVRQ 262 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 17/170 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + +VL N+G+V R+ G+ + L P + AAG + ++ Sbjct: 145 PPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICR 204 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + L + G S E P LV G E+ Sbjct: 205 TTNLAGALGTLKKHGFWIYGASG-------------EASGNLYETDFTGPTCLVLGNEQK 251 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 G+ + C + +AI SLN+++A ++ E+R Sbjct: 252 GIRPLLKKHCDFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQHFFAPGKP 301 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 12/157 (7%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAH 61 N+ I+L GNMG++ R G+ + L + V + + A G+ I Sbjct: 101 NNLIILLDAIQDPGNMGTIIRTADAAGVDAVVLGDGCVDIFNDKVIRATQGSIFHIPI-- 158 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 TL++ + T + ++ + + V L+ G E G+ Sbjct: 159 YTATLEQEIHMLQTQGFT---------ILATALHDAVEYTEVSVHNKVGLILGNEGAGIA 209 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L K + + I + SLN+ +A ++ Y ++ Sbjct: 210 PSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacillus RepID=Q1G9C5_LACDA Length = 260 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 11/153 (7%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVD 64 ++L + + GN+G++ R G + L N V + + + G+ + Sbjct: 118 WVLLDDLADPGNVGTIIRTADAAGFDGVILSNKTVDLYNPKVQRSMQGSQFHLNLIK--A 175 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L +A+A S ++ +P + A VAL+ G E G++ E Sbjct: 176 DLPDAIA--------SLKAADIPVYASLLDPAAKQLGDFAPVAQVALIIGNEAHGVSPEI 227 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157 + I SLN A+A ++ Y Sbjct: 228 EALADEKLYIPIKGRAESLNAAVAAGIMIYHFS 260 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 54/154 (35%), Gaps = 12/154 (7%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIVD 64 +VL GN+G++ R G L LVN P S A GA + Sbjct: 110 YLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWET-- 167 Query: 65 TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124 L+ A +P RE + A+V G E G+++E Sbjct: 168 DLETVRALLD--------GADIPLYATALREDTVDVRDVDLK-RAAVVIGSEGRGISDEA 218 Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L C + I SLN AMA V+ +E+ Sbjct: 219 LALCRRTIKIPMRARCESLNAAMAAGVVLWEMCR 252 >UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY95_HYPNA Length = 271 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 12/158 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63 + I L E GN+G++ R G++ + L+ P S +A+ + G+ + A Sbjct: 123 LYIALYEVRDPGNLGTILRTADCAGVSGVILIGTCCDPYSFEAVRASMGSVFDVPFA--H 180 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 D T + + ++ ++ G E+ GL + Sbjct: 181 TDFDAF--------NTWRKGEGMSLTAASVN-GTVRHDGADFTGGSIILMGNEQAGLPDW 231 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 C I SLNLA A ++ YE Sbjct: 232 VEAACDTLSLIPMRGGADSLNLAQASALMIYEAWRQRG 269 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 11/158 (6%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + IVL + GN+G++AR+ +++G + + N + +AGA I A + Sbjct: 109 LIIVLDHITDAGNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVA 168 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L +ALA W + V LV G E GL Sbjct: 169 N-LQQALARLKN---------EGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARL 218 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 + C + V++ SSLN+A + V YE Sbjct: 219 TQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQNR 256 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 18/158 (11%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 ++L + N GS+ R+ G+ + + ++AGA + + Sbjct: 111 FVVILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVT 170 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T++ + G A + LP L+ G E G+ Sbjct: 171 NLVRTVERLKKEGFWIYGADAGGKALP--------------NLTFPKKTVLIMGNEGRGM 216 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 + + C V+I + SLN+++A ++ YE+ Sbjct: 217 SRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISR 254 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 64/156 (41%), Gaps = 16/156 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHI--- 62 +VL + S N G++ R + + +++ V ++ +AGA + + + Sbjct: 98 LVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNL 157 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + ++ + TS ++ + P+ L+ G E G++ Sbjct: 158 TNAIEYLKKQGFWIYATSLNTK------------AQNVSELKYDIPICLIVGNEGTGISA 205 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 + L+ +++ I SLN+++A ++ Y+++M Sbjct: 206 KLLKHADFNIYIPTAGHLDSLNVSVASAILIYQIKM 241 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 16/157 (10%) Query: 7 IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI--- 62 ++L N+G++ R + G+ + + A+ +AGA + + + Sbjct: 125 LILDHIEDPHNLGAIIRTAEASGVKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNL 184 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 D + + + GT+ R A + P+A+V G E G++ Sbjct: 185 TDAIKKLKEKGFWIAGTTLAER------------SEDYTKIAKDVPLAIVIGNEGEGMSK 232 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159 +C + + + SLN ++A +I YE + Sbjct: 233 VVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERIKS 269 >UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3 Length = 274 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 9/165 (5%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62 + +VL GN+G++ R G+ +WL V P S + ++ S ++ Sbjct: 119 ARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQ 178 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + +L L + + P ++FG E GL+ Sbjct: 179 LQSLPPLLEKFHT---------QGLQLIATVPQATQTLWEIDFQRPTIVIFGSEGQGLSA 229 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 L+ + VAI P+ SLN+A+AV V+ YE R A G Sbjct: 230 PVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAASTPG 274 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 17/156 (10%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIG--NAHI 62 +VL GN+G++ R G + L ++ + GA I + Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISRTEL 160 Query: 63 VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122 + L+E V+GT + + +A+V G E G+ Sbjct: 161 IPALNELKELGVTVIGT-------------ALQGAQPLSELPVSENIAVVLGNEGQGIRP 207 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 L C I + + SLN+A+A + Y R Sbjct: 208 ATLDICDQRALIEMS-SFESLNVAVAAGICLYRYRR 242 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + ++L N+G++ R + + ++ ++ P + +AGA + Sbjct: 107 SPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPISATVHKASAGALSHMRVCK 166 Query: 62 I---VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + V TLD +V E P LV G E Sbjct: 167 VKSLVKTLDLLHERGFSIVAADM-------------EAEHNHTDIDWKRPTVLVMGAEGK 213 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162 GL +E ++C V I SLN+++A V+ YE L Sbjct: 214 GLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQRLG 257 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 17/160 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63 + ++L N+G+ R MG+ L V ++ +A G ++ + + Sbjct: 99 LFLILDGVVDPQNLGACFRVADAMGVDALICPKDNAVGLNATVRKVACGGAESVPFVVVT 158 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T+ V GT +ALV G E G+ Sbjct: 159 NLARTIRYLKNSNVFVYGTD-------------DNANKSLQKTNFKGSIALVMGSEGKGM 205 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 + C +I + SLN+++A + YE+ Sbjct: 206 RRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 >UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD55_9FIRM Length = 264 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 8/153 (5%) Query: 6 RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65 ++L GN+G++ R G + L + + A+ A + D Sbjct: 120 YLLLSSLQDPGNVGTILRTAAAFGTDGVILSADCPDLYAPKVLRASMGGVFRARACVSDD 179 Query: 66 LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125 L ++A R+ +P P E + + + A+V G E G+ E Sbjct: 180 LSASIAAL--------RAAGVPVWAAMPAEGSVSLRDISLHGGGAVVVGNEGGGIAPELA 231 Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158 C + I P SLN AMA VI +E+ Sbjct: 232 ALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264 >UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella RepID=A1S6F2_SHEAM Length = 225 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 14/218 (6%) Query: 25 MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84 MKTMG T L L+ + +A +A GA+D++ NA ++D+ D+ A L++ T+AR R Sbjct: 22 MKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLDSFDDLRAEFDLLIATTARER 81 Query: 85 TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLN 144 P L+P E + A +ALVFGRE GL+N+EL +C + +Y SLN Sbjct: 82 GSPRTFLNPEELAITLGQSGA-QSMALVFGRESSGLSNQELSQCDLFSYVPLAGDYPSLN 140 Query: 145 LAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENH 204 L AV V Y + E+ +T ++ + G ++ Sbjct: 141 LGQAVMVYTYALS--------GVERTIGLQTRDADERQIQSLKHKANELANQLGLSEQDK 192 Query: 205 PGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242 L+ R ++ + +++ I + G Sbjct: 193 LRPW---LQDSIGR--LSERDCKLAHQLISDIMSKING 225 >UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria RepID=Q11C30_MESSB Length = 286 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 13/168 (7%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61 +++ + L GN+G++ R + +G + LV P S + + G+ + Sbjct: 129 EDLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETVRATMGSVFSVP--- 185 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120 LA + R + + + + PV L+ G E+ GL Sbjct: 186 --------LARADEAAFLAWREHFAGLMVGTHLKGSVDYRNVDYSGGPVLLLMGNEQQGL 237 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168 ++ + C V I SLNLA+A V+ YE+R L Sbjct: 238 PDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRRTALPASHGTP 285 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 2/152 (1%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI-ALAAGASDVIGNAHIV 63 + ++L + + N+G++ R G L + + + AAGA D + A + Sbjct: 166 VLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARVT 225 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L AL + S L + + +V G E GL Sbjct: 226 N-LSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRL 284 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155 + C + V I + SLN++ A + YE Sbjct: 285 VAEHCDHLVKIPMPGGFESLNVSHATSIALYE 316 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 142 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59 ++ + L GN+G+V R +G + L+ P S A S + Sbjct: 142 NDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYR 201 Query: 60 AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119 A D L+ LVVGT + + AN PV L+ G E+ G Sbjct: 202 ASEADFLNWRKGFSGLVVGTHLKGAVDYRTI------------PYANKPVILIMGNEQQG 249 Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167 L + C I SLNLA+A V+ YE+R L E G Sbjct: 250 LPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 142 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63 + ++L N+G++ R+ G + + V+ + ++ G I +V Sbjct: 97 LLVLLDRIQDPHNLGAIIRSSVAAGADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVV 156 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + T++ + G + + AL+FG E G+ Sbjct: 157 NMARTIETLKEEGFWTYAATM--------------EGEPYYSVSFTDKAALIFGNEGKGI 202 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 + +K Y V+I SLN+A + ++ +E R W Sbjct: 203 RHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRRQW 242 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 17/166 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 + ++L + N+G+ R G+ + + P + +A GA++ + Sbjct: 95 SPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVR 154 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + T+ +VGT+ E +A+V G E Sbjct: 155 VTNLARTMRHLQEQGIWIVGTAG-------------EATHDIYQAKLTGSLAIVMGAEGD 201 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164 G+ + C + I SSLN+++A + +E LA+Q Sbjct: 202 GMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQRLASQ 247 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 18/165 (10%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61 ++L + N+G++ R G+ + L +I +AG I Sbjct: 84 NPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPIVI 143 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 V+ +++ + G R G P+ +VFG E Sbjct: 144 TVNLARYIEKLKDKGVWIYGADMR--------------GKPLWEVKLERPLGIVFGNEGS 189 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 G+ + C V+I SLN++++ ++ YEV + Sbjct: 190 GIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRREMGG 234 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 17/163 (10%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63 + +VL + GN G++ R+ + +G + + N A +AGA + A + Sbjct: 189 LVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVS 248 Query: 64 D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120 + L+E A G++ +ALV G E G+ Sbjct: 249 NLPRALEELKAAGFWTCGST-------------EHATQSVWEAPMGGRLALVMGSEGSGI 295 Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 + L+KC + + + SLN+A A V+ YE Sbjct: 296 SRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLRRTQEA 338 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 11/163 (6%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 + + N+G++ R+ + G + L V + +AAGA + + A Sbjct: 182 DPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIAR 241 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 + + L++A+ + + + P+ +V G E G++ Sbjct: 242 VTN-LNQAIERL---------KEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGIS 291 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164 + C + V+I + +SLN ++A ++ YEV A Q Sbjct: 292 LLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQ 334 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 17/173 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61 ++ + L N+G++ R+ G+ + L P + A+ +AGA++ I A Sbjct: 97 PHLLLALDGVEDPQNLGALLRSADGAGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIAR 156 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 +V+ L++ VG R + A TP +V GRE Sbjct: 157 VVNLVRALEQLKEQNIWCVGLDER-------------GTMSYDAYDWTTPSVVVLGREGE 203 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171 GL + + C + V I SSLN++ A V+ YE + + Sbjct: 204 GLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEAARQRRVGKPETAPLP 256 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 16/162 (9%) Query: 3 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61 N+ ++ + N+G++ R G+ + + V S ++ GA + + A Sbjct: 86 NNLIVLCDQLEDPHNLGAILRTCDACGVDGVVVGKHRSVGLTSTVAKVSTGAINTVKVAE 145 Query: 62 IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118 + + E VV + + + P+ LV G E Sbjct: 146 ATNMVKAIAELKEAGYWVV------------AAENAVDAVDYTEFNVDMPLVLVVGSEGK 193 Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160 G++ ++C I +SLN+++A V+ +++ Sbjct: 194 GISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRR 235 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 12/159 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63 + + L E N+G++AR + G T L + +AGA + + A Sbjct: 108 LIVALDEIQDPQNLGAIARTAECAGATGLVIPARRSADVTPAVCKASAGAVEHLPIAR-A 166 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTN 122 L + L V W + G+ + P V LV G E GL Sbjct: 167 RNLADFLGDARGV---------GAWVYGAEGDGGVPYTGVDYSGPGVVLVLGSEGRGLRP 217 Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 C +A+ SLN++ A + YE+ Sbjct: 218 RVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQRG 256 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 15/160 (9%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAH-- 61 + + L E GN+G++ R + + + L + V + + A GA I Sbjct: 124 LLLFLDEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMGALFRIPVFTQS 183 Query: 62 IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121 +VDT DE A V+ + + + ALV G E G++ Sbjct: 184 LVDTADEWKAKGGRVL------------ISSLEQNSVSYDEADYAGLTALVIGNEGRGVS 231 Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161 E K V I SLN A+A + YE + Sbjct: 232 KEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKRR 271 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 12/160 (7%) Query: 5 IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIV 63 + L NMG++ R+ + G + + + + ++AGA + A + Sbjct: 84 FILFLDSVEDPQNMGAIMRSAEFFGCAGVVIPKRRCVQVNETVAKVSAGAVFHLDIARV- 142 Query: 64 DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123 + L L + + ++ G + P+A+V G E GL+ Sbjct: 143 ENLANILK----------KLKKFGITVVGADLDGEPLRNVDLSPPLAIVVGGEDKGLSKP 192 Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163 ++C + I + +SLNL++A +I YE R Sbjct: 193 VKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRRLHEG 232 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.175 0.522 Lambda K H 0.267 0.0539 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,835,418,338 Number of Sequences: 3077464 Number of extensions: 92905281 Number of successful extensions: 278648 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1949 Number of HSP's successfully gapped in prelim test: 550 Number of HSP's that attempted gapping in prelim test: 272570 Number of HSP's gapped (non-prelim): 2710 length of query: 246 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 121 effective length of database: 655,713,356 effective search space: 79341316076 effective search space used: 79341316076 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (39.7 bits)