09/01/2012 03:05:29 : INFO  : Run start: Mon Jan  9 03:05:28 GMT 2012
09/01/2012 03:05:35 : INFO  : Initialised job
09/01/2012 03:05:37 : INFO  : Renaming log file 'phyre2_20120109_030527.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/15305cd3482d4b50/phyre_20120109_030527.log'
09/01/2012 03:05:38 : INFO  : Initialised job:
Sequence
>batch____
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA
HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL
TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV
DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN
KGNKAE

09/01/2012 03:05:39 : INFO  : Checked sequence
09/01/2012 03:05:42 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 03:05:43 : INFO  : PSI-BLAST 3 iterations
09/01/2012 03:07:21 : INFO  : PSI-BLAST 5 iterations
09/01/2012 03:09:20 : INFO  : Finished PSI-BLAST
09/01/2012 03:09:22 : INFO  : Running Buildali to generate a3m file
09/01/2012 03:19:13 : INFO  : Converting to HMM
09/01/2012 03:19:17 : INFO  : Calibrating HMM
09/01/2012 03:19:29 : INFO  : Searching HMM database
09/01/2012 03:23:59 : INFO  : Finished buildali
09/01/2012 03:24:01 : INFO  : Predicting secondary structure
09/01/2012 03:24:10 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 03:24:12 : INFO  : Predicting Disordered regions
09/01/2012 03:24:17 : INFO  : Predicted Disorder (Disopred)
09/01/2012 03:24:19 : INFO  : Running memsat_svm check
09/01/2012 03:26:43 : INFO  : Running memsat_svm full
09/01/2012 03:36:49 : INFO  : Predicted Transmembrane (memsat_svm) ID '15305cd3482d4b50'
09/01/2012 03:36:52 : INFO  : Initialising fold library search
09/01/2012 03:36:54 : INFO  : Initialised search input
09/01/2012 03:36:56 : INFO  : Building Ensemble models
09/01/2012 03:36:59 : INFO  : Building hh.c3ilkB_.model.1.pdb
09/01/2012 03:37:12 : INFO  : Building c3ilkB_.1.pdb
09/01/2012 03:37:24 : INFO  : Building c3ic6A_.2.pdb
09/01/2012 03:37:35 : INFO  : Building c3onpA_.3.pdb
09/01/2012 03:37:47 : INFO  : Building c1zjrA_.4.pdb
09/01/2012 03:37:57 : INFO  : Building c3ktyA_.5.pdb
09/01/2012 03:38:06 : INFO  : Building d1v2xa_.6.pdb
09/01/2012 03:38:15 : INFO  : Building c2ha8A_.7.pdb
09/01/2012 03:38:27 : INFO  : Building d1gz0a1.8.pdb
09/01/2012 03:38:37 : INFO  : Building c1gz0G_.9.pdb
09/01/2012 03:38:48 : INFO  : Building c1ipaA_.10.pdb
09/01/2012 03:38:57 : INFO  : Building c3dcmX_.11.pdb
09/01/2012 03:39:07 : INFO  : Building c1x7pB_.12.pdb
09/01/2012 03:39:20 : INFO  : Building d1ipaa1.13.pdb
09/01/2012 03:39:31 : INFO  : Building c2i6dA_.14.pdb
09/01/2012 03:39:41 : INFO  : Building d1mxia_.15.pdb
09/01/2012 03:39:54 : INFO  : Building c3gyqB_.16.pdb
09/01/2012 03:40:04 : INFO  : Building c3l8uA_.17.pdb
09/01/2012 03:40:14 : INFO  : Building c3e5yB_.18.pdb
09/01/2012 03:40:25 : INFO  : Building c1vhkA_.19.pdb
09/01/2012 03:40:36 : INFO  : Building d1vhka2.20.pdb
09/01/2012 03:40:57 : INFO  : Finished HH model building
09/01/2012 03:40:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 03:41:46 : INFO  : html domain output complete ID '15305cd3482d4b50'
09/01/2012 04:20:23 : INFO  : Run end  : Mon Jan  9 04:20:22 GMT 2012
