BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (246 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   506   e-142
UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   405   e-112
UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   376   e-103
UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ...   321   1e-86
UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil...   320   3e-86
UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ...   277   3e-73
UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ...   268   9e-71
UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03...   260   3e-68
UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ...   258   1e-67
UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter...   245   8e-64
UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ...   238   1e-61
UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro...   232   9e-60
UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ...   227   3e-58
UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ...   219   6e-56
UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ...   212   7e-54
UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith...   211   1e-53
UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro...   211   2e-53
UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella...   210   3e-53
UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ...   210   4e-53
UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick...   209   6e-53
UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ...   199   7e-50
UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G...   198   1e-49
UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI...   195   1e-48
UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ...   194   2e-48
UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ...   194   3e-48
UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ...   192   6e-48
UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur...   190   3e-47
UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ...   189   9e-47
UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami...   185   1e-45
UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30...   182   1e-44
UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ...   182   1e-44
UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ...   181   3e-44
UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte...   180   5e-44
UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34...   178   1e-43
UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac...   174   3e-42
UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur...   172   1e-41
UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma...   172   1e-41
UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp...   171   2e-41
UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad...   167   2e-40
UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s...   166   7e-40
UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ...   159   1e-37
UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ...   152   9e-36
UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria...   151   2e-35
UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ...   151   2e-35
UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re...   150   3e-35
UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ...   148   2e-34
UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68...   146   7e-34
UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ...   143   5e-33
UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma...   143   5e-33
UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ...   142   7e-33
UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ...   142   1e-32
UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25...   137   3e-31
UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ...   136   5e-31
UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ...   135   1e-30
UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ...   135   1e-30
UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ...   132   1e-29
UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ...   131   2e-29
UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne...   131   2e-29
UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot...   130   4e-29
UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc...   129   1e-28
UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein...   128   2e-28
UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto...   127   4e-28
UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a...   127   4e-28
UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ...   125   1e-27
UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ...   124   4e-27
UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or...   123   5e-27
UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11...   123   6e-27
UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ...   122   1e-26
UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM...   122   1e-26
UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group...   121   2e-26
UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera...   121   2e-26
UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur...   119   1e-25
UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ...   119   1e-25
UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ...   118   2e-25
UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo...   117   3e-25
UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re...   115   9e-25
UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo...   115   1e-24
UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ...   115   2e-24
UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph...   114   2e-24
UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ...   112   8e-24
UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ...   112   1e-23
UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N...   111   3e-23
UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7...   109   9e-23
UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales...   109   1e-22
UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ...   108   1e-22
UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12...   108   1e-22
UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq...   108   2e-22
UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho...   107   5e-22
UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   106   6e-22
UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10...   106   8e-22
UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L...   105   1e-21
UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat...   104   2e-21
UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ...   103   4e-21
UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS...   103   5e-21
UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ...   102   9e-21
UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar...   102   9e-21
UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=...   102   1e-20
UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido...   101   2e-20
UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep...   100   3e-20
UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne...   100   4e-20
UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc...   100   6e-20
UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod...    99   1e-19
UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula...    99   2e-19
UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ...    99   2e-19
UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo...    98   2e-19
UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra...    98   3e-19
UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14...    98   3e-19
UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI...    97   3e-19
UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe...    97   4e-19
UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell...    97   5e-19
UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ...    97   6e-19
UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo...    96   8e-19
UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ...    96   9e-19
UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter...    96   1e-18
UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ...    95   2e-18
UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ...    94   4e-18
UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob...    94   5e-18
UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT...    94   6e-18
UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto...    93   8e-18
UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ...    92   1e-17
UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon...    92   2e-17
UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or...    92   2e-17
UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...    92   2e-17
UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ...    91   3e-17
UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha...    91   3e-17
UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ...    91   3e-17
UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc...    91   4e-17
UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ...    90   7e-17
UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte...    89   1e-16
UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402...    88   2e-16
UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...    88   2e-16
UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido...    88   2e-16
UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe...    87   4e-16
UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT...    86   1e-15
UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM...    86   1e-15
UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ...    86   1e-15
UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer...    85   2e-15
UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic...    85   3e-15
UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ...    84   4e-15
UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro...    84   4e-15
UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc...    84   5e-15
UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...    84   5e-15
UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc...    84   5e-15
UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ...    84   6e-15
UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr...    82   2e-14
UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta...    81   2e-14
UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudona...    81   3e-14
UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarin...    81   3e-14
UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo...    81   4e-14
UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ...    80   5e-14
UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano...    80   6e-14
UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus...    80   9e-14
UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi...    78   2e-13
UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD...    78   3e-13
UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...    77   4e-13
UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor...    76   8e-13
UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ...    75   3e-12
UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomon...    74   3e-12
UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo...    74   4e-12
UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pe...    74   5e-12
UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam...    73   8e-12
UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ost...    69   1e-10
UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ...    67   6e-10
UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H...    65   3e-09
UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ...    63   8e-09
UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group...    57   4e-07
UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor...    57   5e-07
UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcu...    52   2e-05
UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales...    52   2e-05
UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCM...    51   3e-05
UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria Rep...    50   6e-05
UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCM...    47   4e-04
UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8...    47   4e-04
UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1...    47   8e-04
UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 ...    45   0.002
UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimo...    45   0.002
UniRef50_Q1VZT2 rRNA methylase n=1 Tax=Psychroflexus torquis ATC...    45   0.003
UniRef50_C6T8X9 Putative uncharacterized protein n=2 Tax=rosids ...    44   0.006
UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID...    43   0.008
UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14...    43   0.010
UniRef50_B8DQP1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...    42   0.014
UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase...    42   0.022
UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamic...    42   0.023
UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51...    42   0.025
UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero...    41   0.030
UniRef50_A3XMS0 Putative tRNA/rRNA methyltransferase n=1 Tax=Lee...    41   0.034
UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21...    41   0.042
UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 T...    40   0.058
UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe...    40   0.075
UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu...    40   0.077

>UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189
           Tax=Proteobacteria RepID=TRMJ_ECOL5
          Length = 246

 Score =  506 bits (1302), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/246 (99%), Positives = 246/246 (100%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA
Sbjct: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL
Sbjct: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV
Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN
Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240

Query: 241 KGNKAE 246
           KGNKAE
Sbjct: 241 KGNKAE 246


>UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57
           Tax=Gammaproteobacteria RepID=TRMJ_YERPA
          Length = 257

 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A
Sbjct: 1   MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S  EA + PVALVFGRERVGL
Sbjct: 61  TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-NGEQVEHEETPYPL 179
           TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L  Q+ N    E EE PYPL
Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           VDDLERFY HLEQ L  +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q
Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240

Query: 240 NK 241
           +K
Sbjct: 241 DK 242


>UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70
           Tax=Gammaproteobacteria RepID=TRMJ_PHOLL
          Length = 241

 Score =  376 bits (965), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/241 (73%), Positives = 210/241 (87%), Gaps = 1/241 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A
Sbjct: 1   MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A +  VA+VFGRERVGL
Sbjct: 61  TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYH+ I  NPEY SLNLAMAVQ+++YE+RMA+LA Q+  EQ + +E  YPL 
Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DD+ERFY HLE  L  +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+  
Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239

Query: 241 K 241
           K
Sbjct: 240 K 240


>UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Gammaproteobacteria RepID=Q080P3_SHEFN
          Length = 240

 Score =  321 bits (823), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 158/239 (66%), Positives = 186/239 (77%), Gaps = 4/239 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L  P  +PD Q+IALAAGASD++ N 
Sbjct: 1   MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK   E+ N PVA+VFGRE  GL
Sbjct: 61  TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA  E     +     YPL 
Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTDE----YPLT 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            +LERF+ HLE TL  TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++
Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKK 235


>UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2
           Tax=Alteromonadales RepID=Q3IFI1_PSEHT
          Length = 241

 Score =  320 bits (820), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 155/239 (64%), Positives = 186/239 (77%), Gaps = 2/239 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P  + DS A ALAAGASDV+GNA
Sbjct: 2   ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE  GL
Sbjct: 62  VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L  Q   +  E ++T YP  
Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
              E FYGHLE+TL  TGFI + HPG VM KLRR+F RARPE  E+NILRGIL SI + 
Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINKS 238


>UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae
           RepID=C9R390_AGGAD
          Length = 241

 Score =  277 bits (708), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P    D QAIALAAGA DV+ +A
Sbjct: 1   MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              ++  +A+A CSLV+GTSAR R L   +++PRECG K+VA A N  VA+VFGRERVGL
Sbjct: 61  VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL--ATQENGEQVEHEETPYP 178
           TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L        + + +    YP
Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            +++LE F+ H EQ   + GFI+      VM +LRRL+ RA  E  ELNIL G+L+++E+
Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQG---VMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237

Query: 239 QNK 241
           + K
Sbjct: 238 KLK 240


>UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8
           Tax=Gammaproteobacteria RepID=B3PDK4_CELJU
          Length = 286

 Score =  268 bits (686), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 137/237 (57%), Positives = 165/237 (69%), Gaps = 1/237 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
             NIRIVLV TSH GN+G  ARAMK MGL  L+LV P   P  +A+  AAGA+DV+ NA 
Sbjct: 9   FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG    AEA    VA+VFGRE  GLT
Sbjct: 69  VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180
           NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L   E      H  + P    
Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             LE +Y HLEQ L+  GF+  ++P Q M +LRRL+ R R +  ELNILRG+L +++
Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQ 245


>UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24
           Tax=Gammaproteobacteria RepID=Y380_HAEIN
          Length = 241

 Score =  260 bits (664), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 171/239 (71%), Gaps = 6/239 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P    D Q+ AL+AGA +++ NA
Sbjct: 1   MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSP-KSVDEQSYALSAGAENIVKNA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD+ DEA+  CSLV+GTSAR R L   +++PREC  K VA      +A+VFGRER+GL
Sbjct: 60  RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAYKG--KIAIVFGRERIGL 117

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L        +   E  YP  
Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           D L  F+ + E+   + GFI+      VM KL+RL+ RA+ E  ELNIL G+L+++E++
Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQG---VMRKLKRLYYRAKLEKNELNILNGMLSAVEKR 233


>UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7
           Tax=Gammaproteobacteria RepID=A6VX19_MARMS
          Length = 260

 Score =  258 bits (660), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 168/239 (70%), Gaps = 4/239 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P   P  +A + AAGA D++ NA
Sbjct: 1   MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IV TL+EA+A CSLV+GTSAR RT   P+++ REC    + EA +  VA+VFGRE  GL
Sbjct: 61  TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N+E+ +CH  V I AN EY  LN++ AVQ++ YE+   W+A Q N E  + E   YP  
Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEI---WMANQ-NKENYKKETPEYPHK 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++ FY HLE+TL    FI  +HPG+V++KL R F R+RPE QEL ILRG+LA+++++
Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQRE 235


>UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria
           RepID=Q5ZUP6_LEGPH
          Length = 257

 Score =  245 bits (626), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 127/249 (51%), Positives = 168/249 (67%), Gaps = 7/249 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP   PD +A  +AAGA DV+  A 
Sbjct: 3   LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + +TLDEAL GC L++GTSAR R L  P L P  C      ++ NT VA+VFGRE  GLT
Sbjct: 63  VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM  L+      QV          D
Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA----SIE 237
           ++E+FY HL++  +   F++ ++P ++M ++RRLF R   E  E++ILRG+L+    S+E
Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239

Query: 238 QQNKGNKAE 246
              K N+++
Sbjct: 240 WARKDNRSD 248


>UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VS87_ALCBS
          Length = 261

 Score =  238 bits (608), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/254 (47%), Positives = 172/254 (67%), Gaps = 15/254 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P   P  +A A A+GA DV+  A
Sbjct: 1   MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP----VALVFGRE 116
            + +++DEAL G +LV+GTSAR R +PWP L PR+   +   + AN P    +A++FGRE
Sbjct: 61  QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT----QENGEQVEH 172
             GLTN+EL++C+ HV++ ANPEY  LN+A AVQ+I+YE+R+A L      QE+  + E 
Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180

Query: 173 EETPYPLVDD-------LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225
              P    D+       +  F  HLE+ +  +GF+    PGQVM ++RRLF RARP+  E
Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240

Query: 226 LNILRGILASIEQQ 239
           ++ILRG+L ++E++
Sbjct: 241 MSILRGVLVALEKK 254


>UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QVJ6_CHRSD
          Length = 246

 Score =  232 bits (591), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 121/241 (50%), Positives = 162/241 (67%), Gaps = 7/241 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLV+T H GN+G  ARAMKTMGL++L LVNP   PD++A  LAAGA+DVI NA
Sbjct: 1   MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119
            +V+ + +A+  C  VVG SAR R+LP P   DP     + +  A + PVALVFGRER G
Sbjct: 61  RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP--Y 177
           LTN+E++ C + V+I ANPEY  LNLA AVQ++AYEVR AW   Q +       +TP   
Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPAT---SQTPPSL 177

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           P  D +  F  HL + L+ +GF+ + H  +  + LR LF RA+P  +EL+ILRG+L+++E
Sbjct: 178 PTRDQMAHFEAHLHEALVTSGFLTQPH-ARTEDHLRALFARAQPSRKELSILRGVLSTLE 236

Query: 238 Q 238
           +
Sbjct: 237 K 237


>UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7RCC9_KANKD
          Length = 277

 Score =  227 bits (578), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/261 (47%), Positives = 169/261 (64%), Gaps = 22/261 (8%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P   P  +A+  ++GA DV+ NA
Sbjct: 15  LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERV 118
            +VDT++EALA C L++GTS+R+R LPWP+++PRE G  +K   EA   PVA++FGRE  
Sbjct: 75  QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEA--RPVAIMFGREST 132

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE---------NGE- 168
           GL NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A     E         + E 
Sbjct: 133 GLLNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAEL 192

Query: 169 ------QVEHEETPYPL--VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220
                 + EH++    L   ++++  Y HLE T+  T F     P  +  ++RR+  +AR
Sbjct: 193 GYDAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKAR 252

Query: 221 PESQELNILRGILASIEQQNK 241
               E+NILRG L+SI++  K
Sbjct: 253 LNKGEVNILRGFLSSIDKYIK 273


>UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga
           thiooxidans DMS010 RepID=C0N7P7_9GAMM
          Length = 253

 Score =  219 bits (558), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++  A 
Sbjct: 15  MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + D+LDEAL GC      SAR R LP P+++PR+   +      NT +A+VFGRE  GL+
Sbjct: 75  VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++    + G   E  E      D
Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQREAITN--D 192

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           DL   Y H E++L   GF+   +P  +M +++RLF RA  +  EL+I+ GIL + E + K
Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252


>UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH
          Length = 260

 Score =  212 bits (540), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61
           +N+RIVLV TSH GN+GSVARAMKTMGL  L LV P    PD QA A A+ A DV+  A 
Sbjct: 12  ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWP-MLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             D LD ALAGC LV+G SAR R +    +LD RE G + VAEA + PVAL+FGRER GL
Sbjct: 72  RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL +C   V I ANPEY SLNLA AVQV+ +EV MA       G  V          
Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMA------RGAGVVAPTRRSASA 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
            D+E F+ HL +     GF+R+++P  +M +LR+LF RA P+  EL +LRG+LA++E
Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242


>UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus
           ATCC 51756 RepID=C6NVG4_9GAMM
          Length = 263

 Score =  211 bits (538), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/243 (48%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++RIVLVETSH GN+GS ARAMK MGL  L LV P   PD+QA ALA+GA D++  A + 
Sbjct: 20  DLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERAEVY 79

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L  ALA C  V GT+AR R + WP L  R    + VA  A+ PVA++FG ERVGL+N 
Sbjct: 80  DDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGLSNR 139

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL  C   + I     Y SLNLA AVQ++AYE+ +A   T+     V     P      +
Sbjct: 140 ELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRAA---M 196

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE---QQN 240
           E FYGHL Q L   GF++      +M +LRRLF RARP+  E+ ILRGIL  +E   Q +
Sbjct: 197 EGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWAQMD 256

Query: 241 KGN 243
           KG+
Sbjct: 257 KGD 259


>UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria
           RepID=Q2YB91_NITMU
          Length = 267

 Score =  211 bits (536), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/243 (47%), Positives = 151/243 (62%), Gaps = 4/243 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  +RIVL  TSH GN+G  ARAMKTMGL +L+LVNP   PD +A   A GA D++  A
Sbjct: 24  LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + DTLDEAL+G  L    +AR R L   + D R+   K +  A    VALVFG E  GL
Sbjct: 84  KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA---WLATQENGEQVE-HEETP 176
           T  E+ KC   + I ANPEYSSLNLA AVQV+AYE+RMA    L T      +  H    
Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               D++E  Y HLEQ  +++GF+    P ++M ++RRLF RAR E +E+NILRGIL++ 
Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263

Query: 237 EQQ 239
           E++
Sbjct: 264 EKR 266


>UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2
          Length = 249

 Score =  210 bits (535), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 155/244 (63%), Gaps = 3/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NIRIVLVE SH+GN+GS ARAM  MGLTNLWLVNP    D +AIAL+  A++V+ NA
Sbjct: 4   LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63

Query: 61  HIVDTLDEALAGCSLVVGTSARSR--TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            IV  L EAL     VVGTSAR R  +LP   +      + +  + ++  +A++FGRER 
Sbjct: 64  RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-PY 177
           GL NEEL   + H  I +N  Y+SLNLA AVQ++AYE+    +   +  E  E+      
Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             V +L+  Y H E ++L +GF+ ++ PG VM+K+RRLF R+  ESQE+NILRG L S++
Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243

Query: 238 QQNK 241
            + K
Sbjct: 244 NKGK 247


>UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5
          Length = 256

 Score =  210 bits (534), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/240 (50%), Positives = 156/240 (65%), Gaps = 5/240 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P   PD +A ALA+GA D++ +A 
Sbjct: 6   LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +   LD AL GC  V GTSAR R + WP  + RE   + +A+      AL+FGRER GLT
Sbjct: 66  VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYP 178
           N E+ +C   V I    EY SLNL  AVQV+AYE+ MA L T +  + V  E   E P P
Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAAL-TAQPAQDVPAEDVPEQPAP 184

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            ++D+E FYGHL+  L  +GF++E    ++M +LRRLF RARP   E+NILRGIL  IE+
Sbjct: 185 -IEDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIER 243


>UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli
           RepID=A8PK88_9COXI
          Length = 239

 Score =  209 bits (533), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 108/238 (45%), Positives = 152/238 (63%), Gaps = 5/238 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIVLV+T+  GN+G+ ARAMKTMGL  L+LV P   P   A   A+ A D++ +A 
Sbjct: 3   LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VD L+EAL  C LV GTS R R   W  L PR    K +       +A++FG+ER GLT
Sbjct: 63  VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEK-IMNHCQQKIAILFGQERCGLT 121

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L  QE    ++    P   V 
Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFL--QEKN--IKKRTVPLADVK 177

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             + FYG L++ L    F++ N    VM+KLRR+F+RA  +S E+ IL+GI +++E++
Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235


>UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira
           halophila SL1 RepID=A1WXZ7_HALHL
          Length = 249

 Score =  199 bits (506), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 4/236 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L+  RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P   P D +A+A AAGA DV+  A
Sbjct: 3   LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L  AL GC L  G SARSR    P L+ R     +VA+  +  +A VFGRER GL
Sbjct: 63  RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL  CHY V I  +P+YSSLN+A +VQ++A+E+RMA  A    G      E P   V
Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMAAAA---GGPVQGQAEEPPAAV 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           D LERF+ HLE+     G++  ++P   M +LR +F RA     E+ +LRG+++ +
Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHV 235


>UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT
          Length = 249

 Score =  198 bits (504), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  ++IVLV T+H GN+G+ ARAMK MG   L LV P   P   A   +  A D++  A
Sbjct: 11  LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I +TL++A+A C LV+GTSAR R +PWP+L+P+E     V       VALVFGRE  GL
Sbjct: 71  EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--QVEHEETPYP 178
           TNEEL  C++HV I  +P+YSSLNLA AVQ++ YE+R+A L+  E+     VE   T   
Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKNYWDVELANT--- 187

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
                E    H+++ +    F   ++P +++ ++RR F R+  +  E NI RG+ A+I++
Sbjct: 188 --QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQK 245

Query: 239 QNK 241
           + K
Sbjct: 246 KLK 248


>UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO
          Length = 282

 Score =  195 bits (495), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/254 (45%), Positives = 156/254 (61%), Gaps = 13/254 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L ++RIV+V T+   N+GS  RAMKTMGL+ L LV P   P     ALAAGA+D+I    
Sbjct: 13  LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVG 119
           IV+TL +A+  C LV GTSARSRT+PWP+LD R    KS++   N    VA+VFGRE  G
Sbjct: 73  IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE---------QV 170
           LTNEEL   +YHV I  N +Y  LN+A A+QVI YE+RMA LA  E+G+           
Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192

Query: 171 EHEETPYPLV--DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228
           E  +   PLV  + +E+FY H+E+ L    F+   +P  +  +LRRLF R + +  E ++
Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252

Query: 229 LRGILASIEQQNKG 242
           LRGI + ++  N G
Sbjct: 253 LRGIFSRVQALNNG 266


>UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1
           RepID=C7RMU6_9PROT
          Length = 265

 Score =  194 bits (493), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/245 (47%), Positives = 155/245 (63%), Gaps = 7/245 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L+ IRIVL  TSH GN+G+ ARAMKTMG++ L LVNP   PD +A+A AAGA D++G A 
Sbjct: 14  LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  TLD ALA    V   SAR R L  P L  R+  +  VA A    VAL+FG E  GL+
Sbjct: 74  VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY---P 178
           N E+Q+C   V I A+P Y+SLNLA AVQ++ YE+R+A  A       V     P+   P
Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFA---GSPPVVTRTMPFASPP 190

Query: 179 LV-DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
            V  D+ERFY HLE+ ++A+ F+    P +++ KLRRLF R   ES E+NILRG+L ++E
Sbjct: 191 AVHQDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVE 250

Query: 238 QQNKG 242
           ++  G
Sbjct: 251 RKLAG 255


>UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Gammaproteobacteria RepID=Q31I12_THICR
          Length = 268

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/245 (46%), Positives = 156/245 (63%), Gaps = 8/245 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  I+IV+VETSH GN+G+VARAMK MGL+ L LVNP   P   A A A+GA+DV+ +A 
Sbjct: 11  LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVA-EAANTPVALVFGRER 117
           +V+TL++A+A C LVVG SAR R + WP LD R   E  +++V  E  +  VA++FGRE 
Sbjct: 71  VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETP 176
            GL+N EL KCHY   I  NP YSSLN+A AVQV  YE+ MA  + +    E   H+   
Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMATDIKSVHEAEGYRHK--- 187

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               D +E FY HL Q L    F+      + M ++RRLF R++ + +E++ILRG+L + 
Sbjct: 188 LASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAA 247

Query: 237 EQQNK 241
           ++Q K
Sbjct: 248 QRQTK 252


>UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V5A5_9PROT
          Length = 253

 Score =  192 bits (489), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/244 (48%), Positives = 155/244 (63%), Gaps = 5/244 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L NIR+VL  T+H GN+G+ ARAMK MGL+ L+L+NP   PD QA A+AAGA DV+ NA 
Sbjct: 7   LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  ++DEAL G  L VG +AR R +   +  PRE   + V +A    VAL+FG E  GLT
Sbjct: 67  VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEE  +    V I ANPE+SSLNLA AVQVI+YE+ +A     +N + VE    P     
Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVAA----QNYQPVEQSLQPAAH-Q 181

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            +E F  HLE+TL   GF    +P ++M +LRRL+ RARPE+ E+NILRGIL+   + N 
Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241

Query: 242 GNKA 245
             KA
Sbjct: 242 RLKA 245


>UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales
           RepID=Q473D9_RALEJ
          Length = 314

 Score =  190 bits (483), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 11/242 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57
           M   +R VLVETSH GN+GSVARA+KTMG  +L LV+P    V+    A+A+A+GA DV+
Sbjct: 45  MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC---GLKSVAEAANTPVALVFG 114
             A IVD+++ AL G +  V  +AR R    P L PR+    G +S+A  A   +A VFG
Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL----ATQENGEQV 170
            ER GL N+ +++C     I ANP Y+SLNLA AVQ+IAYE+R+A L    A  ++   +
Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224

Query: 171 EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230
            +   P    + +E  +GHL+Q L A GF+   +P ++M +LRRL  RA  E +E+NILR
Sbjct: 225 GYAGEPA-TAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILR 283

Query: 231 GI 232
           GI
Sbjct: 284 GI 285


>UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JRV8_9GAMM
          Length = 239

 Score =  189 bits (479), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 145/239 (60%), Gaps = 9/239 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +R+V+V T  + N+G+VARAMK MGL +L LV P   P   A   AAGA DV+ N  + D
Sbjct: 1   MRVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALAD 60

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-----VALVFGRERVG 119
           +++EA+A C  VV TSAR R   WPM + R+    S++EA         VA++ G ER G
Sbjct: 61  SVEEAIADCHWVVATSARRRGYEWPMSNARQ----SMSEAYRRSQEGQQVAILLGPERSG 116

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L ++ L+ C  H  I+ANP+Y  LN+A A QV+ YE+  A  A  E  E  +     YP 
Sbjct: 117 LDSDSLRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPK 176

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            + +E FY HLE  L   GF+R  HPG  + KLRRL T+A+ E  ELN+LRGIL++IE+
Sbjct: 177 HEAVEHFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIER 235


>UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14
           Tax=Acinetobacter RepID=B7H3X7_ACIB3
          Length = 279

 Score =  185 bits (469), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 17/256 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIV+V T+   N+GS  RAMKTMGL+ L LV+P   P     ALAAGA D++    
Sbjct: 13  LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGL 120
           IV+TL+EA+  C LV GTSARSRT+PWP+LD R    +++  AA    +A+VFGRE  GL
Sbjct: 73  IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-----------NGEQ 169
           TNEEL   +YH+ I  N +Y  LN+A A+QV+ YE+RM+ L  +E            G+ 
Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192

Query: 170 VEHEETPYPLV--DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227
           ++ +E   PLV    +E FY HLE+ L    F+   +P  +  +LRRLF R + +  E +
Sbjct: 193 MQWDE---PLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYH 249

Query: 228 ILRGILASIEQQNKGN 243
           +LRGI + ++    G 
Sbjct: 250 LLRGIFSRVQALTSGK 265


>UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria
           RepID=B2SXQ6_BURPP
          Length = 353

 Score =  182 bits (461), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/257 (41%), Positives = 152/257 (59%), Gaps = 21/257 (8%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58
             + R VLVE SH GN+G+ ARA+KTMG + L LV+P V   + D +AIA+A+GA DV+ 
Sbjct: 95  FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLA 154

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +AH+V TL +AL+G    +  +AR R    P   PR     +  +A +  +ALVFG ER 
Sbjct: 155 SAHVVPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERT 214

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE------------- 165
           GL+NE++++C     I ANP YSSLNLA AVQV+AYE+R  +L+                
Sbjct: 215 GLSNEDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAA 274

Query: 166 -NGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224
             GE V          D++E  + HLE  L+A  F+   +P ++M++LRRLF R+  E +
Sbjct: 275 GEGEAVGARAAS----DEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLERE 330

Query: 225 ELNILRGILASIEQQNK 241
           E+NI+RGI   I  ++K
Sbjct: 331 EVNIVRGIAKHILLKSK 347


>UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria
           RepID=Q6SFH7_9BACT
          Length = 248

 Score =  182 bits (461), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 149/243 (61%), Gaps = 14/243 (5%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
            +IVL  TSH GN+GS ARA+KTMG T+L LVNP   P ++A ALAAGA D++ NA IV 
Sbjct: 11  FKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATIVS 70

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           T+++AL    L++G +AR R L     + RE   K  +E+ +  +AL+FG E  GL+N+E
Sbjct: 71  TIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSNDE 130

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM------AWLATQENGEQVEHEETPYP 178
           ++ CH    I +N +YSSLNLA A+Q+I YE+RM      A + + +  E V HE     
Sbjct: 131 VKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQLSEDNAIIQSSKKNELVTHEVQ--- 187

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
                  FY HLEQ L   GF+++    ++M +LR LF R   E  E+NILRGIL  I++
Sbjct: 188 -----NGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQK 242

Query: 239 QNK 241
           + K
Sbjct: 243 KIK 245


>UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella
           nitroferrum 2002 RepID=B9Z1W4_9NEIS
          Length = 254

 Score =  181 bits (458), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 9/241 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+NIR+VL   SH GN+GS ARAMKTMGL+ L+LV P   P  +A  LA+GA D++ +A
Sbjct: 9   FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119
            +V+TL EAL+  ++    ++R R L  P+  PR+   + VA A +   VALVFG E  G
Sbjct: 69  VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH--EETPY 177
           L+ +E+++C+  V I  NPEY SLNLAMAVQV+ YE+          G  V++   E   
Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYEL------FSHTGVDVDYLRAEAES 182

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
              D++E F GHL+QTL   G+    +  ++M +LR LF RA    +E++ILRG L  ++
Sbjct: 183 ATRDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQ 242

Query: 238 Q 238
           +
Sbjct: 243 R 243


>UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1DBE0_LARHH
          Length = 268

 Score =  180 bits (456), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/241 (43%), Positives = 143/241 (59%), Gaps = 5/241 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+N+R+VL   S   N+GS ARAMKTMGLT L+LVNP   PD +A  LA+GA DV+  A
Sbjct: 19  FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR-ECGLKSVAEAANTPVALVFGRERVG 119
            +  +L EAL G +L    ++R R +  P+  PR  C     A      VALVFG E  G
Sbjct: 79  VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ EE  +C+  V IA NP+Y SLNLA AVQV++YE+  + L    +  + + E      
Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYEL-FSQLDFPLDHLRFQTERASR-- 195

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++E  YGHL+ TL   GF    +  ++M +LR LF RA  E QE++ILRGIL  +E++
Sbjct: 196 -DEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254

Query: 240 N 240
            
Sbjct: 255 T 255


>UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34
           Tax=Burkholderiaceae RepID=Q3JQS9_BURP1
          Length = 346

 Score =  178 bits (452), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58
             + R VLVE SH GN+G+ ARA+KTMG + L LV P V   + D +A+A+A+GA DV+ 
Sbjct: 62  FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLA 121

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +AH+V TL +AL G    +  +ARSR    P L PR     ++ +     +ALVFG ER 
Sbjct: 122 SAHVVPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERT 181

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NE +++C     I ANP YSSLNLA AVQV+AYE+R+A L   E+    +       
Sbjct: 182 GLSNEHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLA 241

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
             D++ER + HLE  L+A  F+   +P ++M +LRRLF R   E +E+NI+RGI   I
Sbjct: 242 QSDEIERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299


>UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum
           RepID=Q7NRY2_CHRVO
          Length = 244

 Score =  174 bits (440), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 148/248 (59%), Gaps = 9/248 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +QNIR+VL   +H GN+GS ARAMKTMGL+ L+LV P V P  +A ALA+GA D++ NA 
Sbjct: 1   MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGL 120
           +V +L EAL+  ++    ++R R L  P+  PR+   + +A A +   VALVFG E  GL
Sbjct: 61  VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH--EETPYP 178
           + EE+++C+  V I  NP+Y SLNLAMAVQV+ YE+          G  VE+   E    
Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYEL------FSHTGVDVEYLRAEGEAA 174

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
              +++   GHLEQ +   G+ +  +  ++M ++R +F RA    +E++ILRG    +++
Sbjct: 175 TQSEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQR 234

Query: 239 QNKGNKAE 246
              G   +
Sbjct: 235 TASGRSGD 242


>UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium
           MedeBAC49C08 RepID=Q4PK37_9BACT
          Length = 239

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 143/239 (59%), Gaps = 7/239 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + QN+  VLVETSH GN+G+ ARAM +MG+ NL LVNP   P +++   A     V+  A
Sbjct: 3   IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERV 118
           +I D L+EA+   +LV+GTSARSR++PWPM++    G K + E  A    V++VFG E V
Sbjct: 63  NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLG-KIINESLARKEKVSIVFGNEAV 121

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NE+L KC +H+ I  + E SSLNL+ AVQ++A+E+   +  +  +    +  E    
Sbjct: 122 GLDNEDLGKCDFHLQIPTS-EDSSLNLSHAVQIVAHEI---YKGSSSSDLFTQAREVELA 177

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
                E+   H+E  L    F    +P QV  +LRRL  R + +  E+ ILRGIL+++E
Sbjct: 178 SSQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236


>UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria
           RepID=A5CWV4_VESOH
          Length = 247

 Score =  172 bits (435), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 140/239 (58%), Gaps = 8/239 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              +R+V+V T+  GN+G+ ARAMK M L+ L+LVNP   P + A A A+GA DV+ +A 
Sbjct: 9   FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECG-LKSVAEAANTPVALVFGRERVG 119
           + ++L+EAL G  LV+G SAR R + W  +D    C  ++      +  VA++FG E+ G
Sbjct: 69  VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LTN+EL  C   + I  NP+Y SLN+A A+QV AY+    +    E  E V    +    
Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQ-NYIYNTPTEFKENVSKLAS---- 183

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237
            D+LE FY HL Q L    + ++ H    +M +LR  FT+  P+ +E++I RGIL +I+
Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242


>UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples
           RepID=A4GJJ4_9BACT
          Length = 243

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 132/237 (55%), Gaps = 10/237 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE SH GN+G+ ARA+K MG   L LVNP  K   +A   A  A D++ N  I 
Sbjct: 8   DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPML--DPRECGLKSVAEAANTPVALVFGRERVGLT 121
            + D A+   +L++ TSAR RT+PWP    D     +KS  +   T   +VFGRE  GL+
Sbjct: 68  KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R      +    +V        +V 
Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVRE------VVS 181

Query: 182 DL--ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           +L  E+   HL + L    F       QV  ++ RL  + R +  E+ ILRG L+ I
Sbjct: 182 NLENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238


>UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae
           RepID=Q2P2B7_XANOM
          Length = 254

 Score =  167 bits (424), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/241 (46%), Positives = 144/241 (59%), Gaps = 6/241 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           Q IR VLV T H GN+G+ ARAMKTMG++ L LV P    D  A   +AGA DV+  A I
Sbjct: 5   QCIRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPI 64

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121
             TL EA+A C+LV+G +AR+R +    L P E   +++A+A+    VA VFGRER GLT
Sbjct: 65  FATLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLT 124

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH----EETPY 177
           N+ELQ CH  V I ++P++SSLNLA AVQV+AYEVR+A LA  E            + P 
Sbjct: 125 NDELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPA 184

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
                LE  +G L  TL    F +   P   M KLRRL  RA    QE+ ++RGIL+  +
Sbjct: 185 SHA-QLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQ 243

Query: 238 Q 238
           +
Sbjct: 244 R 244


>UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105
           RepID=A6GQ32_9BURK
          Length = 269

 Score =  166 bits (420), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 142/245 (57%), Gaps = 10/245 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK---PDSQAIALAAGASDVIG 58
           L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P  K      +AI+LA+GASDV+ 
Sbjct: 7   LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRER 117
            A I +TL EALA  S+    SAR R L   +  P+E   +++    +    A VFG ER
Sbjct: 67  QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW----LATQENGEQVE-- 171
            GL+N+EL  C+  V IAANP YSSLNL+ AVQ++AY +R  W     A  + G   +  
Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            +      V  +     H  + + A  F+  + P +V+ +L R+  +   E +E+++LRG
Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246

Query: 232 ILASI 236
             + +
Sbjct: 247 FFSDV 251


>UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ
          Length = 250

 Score =  159 bits (401), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 141/241 (58%), Gaps = 16/241 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGN 59
           Q +R VLVETSH GN+GS ARA+KTMG  +L LVNP    +   ++AIALA+GA DV+  
Sbjct: 7   QFLRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLET 66

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118
           A +  +L++A+  CSLV+G ++R R    P LD      L S   A    VA+VFG ER 
Sbjct: 67  ATVSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERT 126

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-------LATQENGEQVE 171
           GL NE L  C + V + ANP+Y SLNLA A+ V AY +R  +       L + +  + V+
Sbjct: 127 GLENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVD 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
             + P  +   LE    H  + L A G++   HP ++M + + LF R+R   +E+++LRG
Sbjct: 187 FAD-PIAVAAMLE----HWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRG 241

Query: 232 I 232
           I
Sbjct: 242 I 242


>UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales
           RepID=B1Y5A0_LEPCP
          Length = 252

 Score =  152 bits (384), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 136/233 (58%), Gaps = 14/233 (6%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62
           R +L+ TSH GN+G+ ARAMK MG  +L LV P    V    + +A+A+GA+D++  A I
Sbjct: 9   RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V TLDEAL G  +   T+   R    P   PRE  L ++A A    VA VFG ER G++N
Sbjct: 69  VATLDEALEGIHVACATAMTPRDFGPPTSTPRE-HLPALA-AGGERVAFVFGSERYGMSN 126

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP---YPL 179
           EE+ +C   ++I   P+Y SLNLA AVQ++AYE RMA       G  V    TP      
Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMAL-----GGYDVS-ARTPAVQRAS 180

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
           +D+++    H + TL+A GF+    P ++M +L++L  RA    +E++ILRGI
Sbjct: 181 LDEVQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233


>UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae
           RepID=A1KUH1_NEIMF
          Length = 292

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 143/260 (55%), Gaps = 27/260 (10%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------------LVKPD------ 43
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P            +  P+      
Sbjct: 33  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92

Query: 44  --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+  +  +
Sbjct: 93  LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDL-VSEL 151

Query: 102 AEAANT--PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            + AN    VALVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+   
Sbjct: 152 LQTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQ 211

Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219
             +   + +Q +H  T     + ++    H+E  +   GF    +  ++M +++ LF RA
Sbjct: 212 TGSPMTHLQQEDHAATH----EQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRA 267

Query: 220 RPESQELNILRGILASIEQQ 239
             ++++++ILRG   ++  +
Sbjct: 268 NTQTEDIDILRGFFNTVSHR 287


>UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria
           cinerea ATCC 14685 RepID=D0W0D7_NEICI
          Length = 330

 Score =  151 bits (381), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 143/260 (55%), Gaps = 27/260 (10%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------------LVKPD------ 43
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P            +  P+      
Sbjct: 71  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130

Query: 44  --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+  +  +
Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDL-VPEL 189

Query: 102 AEAANT--PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            +AAN    V LVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+   
Sbjct: 190 LQAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQ 249

Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219
             +   + +Q +H  T     + ++    H+E  +   GF    +  ++M +++ LF RA
Sbjct: 250 TDSPMTHLQQEDHAATH----EQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRA 305

Query: 220 RPESQELNILRGILASIEQQ 239
             ++++++ILRG   ++  +
Sbjct: 306 NTQTEDIDILRGFFNTVSHR 325


>UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD
          Length = 255

 Score =  150 bits (380), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 18/250 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD----SQAIALAAGASDVI 57
              ++ ++V+ SH GN+GS ARA+KTMG  +L LV P   PD     +A+ALA+GA+DV+
Sbjct: 5   FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPRY-PDMTSQPEAVALASGATDVL 63

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVAEAANTPVALVFG 114
             A +  TL+EALA  +L    +AR R L  P  D R   E   + +A   +   A+V G
Sbjct: 64  ERARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLG 123

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEE 174
            ER GLTN ++  C     I ANPEYSSLN+A A+Q+ A+E+R A L  + NG  +    
Sbjct: 124 TERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALL--RANGATLLPAS 181

Query: 175 T---PYP-----LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226
           T   P P       + ++ F  H ++ L+   F+   HP ++M ++R LF+R+     E+
Sbjct: 182 TAQQPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEI 241

Query: 227 NILRGILASI 236
           ++LRG+  ++
Sbjct: 242 DMLRGVCTAM 251


>UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC
          Length = 271

 Score =  148 bits (373), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 129/243 (53%), Gaps = 10/243 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I+IVL  TSHTGN+G+VARAMK MGL  L LV+P    D QA+A A  A+D++  A  VD
Sbjct: 20  IQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQVD 79

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L +ALA    V  T+AR R L  P++  R+      A  +   +++VFG ER GLTN+E
Sbjct: 80  NLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTNQE 139

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      + I ANP+Y  LNL  AVQ++AYE RMA   T  +  Q   + T         
Sbjct: 140 ISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMAH-GTARSAPQPNIDSTELATTAQWA 198

Query: 185 RFYGHLEQTLLATGFIRENHPGQ---------VMNKLRRLFTRARPESQELNILRGILAS 235
            F   L + L  T F       +         +M +LR L  RA P   EL +++GI+ +
Sbjct: 199 AFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIVRA 258

Query: 236 IEQ 238
           + +
Sbjct: 259 LTE 261


>UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803
           RepID=Q55896_SYNY3
          Length = 240

 Score =  146 bits (368), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/227 (42%), Positives = 128/227 (56%), Gaps = 8/227 (3%)

Query: 17  NMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEALAGCSL 75
           N+G++ARAMK MGL  L LVNP     S +A  +A  A DV+  A +VD L  AL     
Sbjct: 8   NVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATALGDRQR 67

Query: 76  VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIA 135
           ++ TSAR R L  PM  PR+  L  +  A N   ALVFGRE  GLTNEEL + H  V I 
Sbjct: 68  IIATSARERILQSPMETPRQ-ALPWLL-APNLKSALVFGREDSGLTNEELNQAHRFVRIP 125

Query: 136 ANPEYSSLNLAMAVQVIAYEVRMAWLATQEN----GEQVEHEET-PYPLVDDLERFYGHL 190
            +P+Y SLNL+ AV V  YE+  A LA + N    G+++E   T P      L+ +  HL
Sbjct: 126 VHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLDSYCQHL 185

Query: 191 EQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           E+TLL    +  +     M K RR++ RA   S+E+ +LRGIL  I+
Sbjct: 186 EKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQID 232


>UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HY98_THIIN
          Length = 260

 Score =  143 bits (361), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 135/243 (55%), Gaps = 15/243 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAAGASDV 56
           L +   VLV TSH GN+G+ ARA+K MG  NL LV P     L +P++  +A A+GA DV
Sbjct: 18  LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPET--LAFASGAEDV 75

Query: 57  IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR---ECGLKSVAEAANTPVALVF 113
           +  A +   L +A+A C +VV  SAR R    P+  P    +   +S  +     VA VF
Sbjct: 76  LKTAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRR--VAFVF 133

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           G ER GL+N ++ +C   ++I ANP Y+SLNLA AVQVIA+E R        +  +    
Sbjct: 134 GSERFGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQA 190

Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
           E+      +++    H+EQ LLA   +  N P +++ +L+RL +RA     E+ ILRG+ 
Sbjct: 191 ESVAATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVC 250

Query: 234 ASI 236
            ++
Sbjct: 251 TAV 253


>UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae
           RepID=A1VM17_POLNA
          Length = 311

 Score =  143 bits (360), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 135/249 (54%), Gaps = 28/249 (11%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62
           R +L+ TSH GN+G+ ARAMKTMG  +L LV P    V    + I  A+GA DV+ NA I
Sbjct: 40  RFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNARI 99

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------ECGLK----SVAEAANTP 108
           V+TLDEAL G + +  T+   R    P   PR          E  LK    +    A  P
Sbjct: 100 VETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQRP 159

Query: 109 --VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
             VA +FG ER G+ NE++ +CH  ++I  +P++ SLNL  AVQ+IAY+ R A       
Sbjct: 160 DSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF--- 216

Query: 167 GEQVEHEETPYPLVDDLERFYG---HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPES 223
           G Q   EE   P + D     G   H E+ L+  GF+    P ++M +L +LF RA+   
Sbjct: 217 GIQAAIEE---PRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSP 273

Query: 224 QELNILRGI 232
           +E++ILRG+
Sbjct: 274 EEIHILRGV 282


>UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9
           Tax=Desulfuromonadales RepID=A1ALQ6_PELPD
          Length = 251

 Score =  142 bits (359), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 9/242 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            ++ IV+VE    GN+G V RAMK MGL+ L LV    +   +++  A  A D++  A +
Sbjct: 10  DSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERAEL 69

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGL 120
            D L  ALA C+L VGT+ R       +L P +    L++ A+  +   ALVFGRE  GL
Sbjct: 70  YDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQ-GDCRGALVFGREDSGL 128

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           T +EL  C +H  I  + EY SLNL+ AV +  YE+  A  +    G + E   T     
Sbjct: 129 TTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKA--SDSPGGGRTEIPATSA--- 183

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            ++E  +  ++ +L   GF+ E +PG +M  LRR+  R+  +++EL ILRG+ + ++   
Sbjct: 184 -EMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWAC 242

Query: 241 KG 242
            G
Sbjct: 243 SG 244


>UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus
           sp. PCC 7335 RepID=B4WI29_9SYNE
          Length = 304

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 144/280 (51%), Gaps = 45/280 (16%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  IRIVLV  +   N+GSVAR MK  GL+ L+LV+P      ++A+ +A  A DV+  A
Sbjct: 15  LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPV---ALVFGRE 116
            IV T+ +ALAGC   + T+AR+R    P LDP E  L ++  +    P+   AL+FG E
Sbjct: 75  QIVPTIPKALAGCEYAIATTARTRGFNVP-LDPPETALPNLLTSNPQQPIRQTALLFGPE 133

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMA---------------- 159
             GL+N+EL      + I  +  YS+LNLA AV +  YE+ R+A                
Sbjct: 134 DRGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIES 193

Query: 160 ---------------------WLATQENGEQV-EHEETPYPLVDDLERFYGHLEQTLLAT 197
                                 L++  N   + EHE+ P   ++++ER+Y HLE  LL  
Sbjct: 194 SLENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQV 253

Query: 198 GFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           G++  +     M K+R+L  RA P S E+ +LRG++  IE
Sbjct: 254 GYLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIE 293


>UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria
           RepID=B8HLP3_CYAP4
          Length = 262

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 127/248 (51%), Gaps = 29/248 (11%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  +RIVLVE +   N+G+++R +K MGL  L LVNPL  P  ++A  +A  A D++  A
Sbjct: 12  LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRT-----------LPWPMLDPRECGLKSVAEAANTPV 109
             V TL +AL GC  ++ T+ R +            LPW +                 P 
Sbjct: 72  RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWLL---------------GHPA 116

Query: 110 ALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169
           AL+FGRE  GLTN EL      + I  +P Y SLNLA AV V +YE+     A+Q   E 
Sbjct: 117 ALIFGREDRGLTNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEP 174

Query: 170 VEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229
           +          ++LE +Y  LE  LL  G++  +     M K RRLF R++P   E+ +L
Sbjct: 175 IAPGGGELARFENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALL 234

Query: 230 RGILASIE 237
           RGIL+ +E
Sbjct: 235 RGILSQVE 242


>UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae
           RepID=B7A9R4_THEAQ
          Length = 244

 Score =  136 bits (343), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 130/245 (53%), Gaps = 14/245 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL--VKPD--SQAIALAAGASDVI 57
           L  +R+VLVE     N+G+VARAM+  GL  L+LVNP   V P    +A  LA  A +++
Sbjct: 5   LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTL-PWPMLDPRECGLKSVAEAANTPVALVFGRE 116
             A  VD+L EALA   LVV T+ R R L P P++   E   + ++      VALVFGRE
Sbjct: 65  DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPAWEVPARVLS--VEGEVALVFGRE 122

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GLTNEEL   H    I   PE  SLNLA AV V AYE+  A    +   E++      
Sbjct: 123 TFGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPREELAQ---- 178

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
              V  LE F+  L + +L  GF  +N     M +LRR+F +AR    E+ +LRG+L   
Sbjct: 179 ---VAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQS 235

Query: 237 EQQNK 241
             Q +
Sbjct: 236 RYQMR 240


>UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus
           RepID=Q2JI62_SYNJB
          Length = 276

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 127/250 (50%), Gaps = 11/250 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  +R+VLV+ +   N+G++AR MK MG     LV+P   P D +AI  A   +D++  A
Sbjct: 12  LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             V TL EAL GC  V GT+ RS+T P  W +  PR+     +A        LVFG E  
Sbjct: 72  RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAA---LVFGPEDR 128

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR--MAWLATQENGEQVEHEETP 176
           GL+NEEL  CH  + I  +  Y SLNLA AV +  YE+   +    +            P
Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELYTLVCQSPSPAPPMPSPQRLAP 188

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           + L   LE F+ HLE  LL  G++  +   + M K R LF RA     E+ +LRGIL  +
Sbjct: 189 FEL---LEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQL 245

Query: 237 EQQNKGNKAE 246
           +     ++ E
Sbjct: 246 QWSQGCSRQE 255


>UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB
          Length = 256

 Score =  135 bits (339), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 6/236 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           +VL E     N+G VARAM   GL +L L+NP    P  +A + ++ A  VI  A + D+
Sbjct: 16  VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERVGLTNEE 124
           ++EA+A   LV  T+ARSR +P P++ P E   +SVA+     P   +FGRER GL N+E
Sbjct: 76  VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   +  V +  +P Y+SLN+A AV V AYE R    A        ++E  P    + ++
Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEPA-TQESIQ 194

Query: 185 RFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           R + HLE  L A GF R  E  P   + +LR +F +A     E+ I+RG+++  E+
Sbjct: 195 RMFDHLESGLDARGFFRPVEKKP-VTIRRLRNIFQKADLTDNEVRIMRGVISCFEK 249


>UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YGR7_THEYD
          Length = 252

 Score =  132 bits (331), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 129/239 (53%), Gaps = 10/239 (4%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+  VLVE   +GN+G+ ARA+K MG TNL L+NP+   D +A  +A  + DV+  A I
Sbjct: 10  ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINPVPLQD-EAYWMAWASKDVLEKAQI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121
              LDE+L   +L++GT+ R       ++D ++ G+K V E A N  VA++FGRE  GL 
Sbjct: 69  FRELDESLKDKALIIGTTRRRGAKRGAIIDVKD-GVKRVYEVAQNNKVAILFGREDKGLF 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEE++KC Y + I  +    SLNLA AV ++AYE     L   E  +        Y    
Sbjct: 128 NEEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYE-----LMRCEELKDFHMNRQFYVSQT 182

Query: 182 DLERFYGHLEQTLLATGFIRENHP--GQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           +L++ Y  L + L    +I +N     +++N  R  F R      EL +L G+   IE+
Sbjct: 183 ELDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEE 241


>UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus
           ruber DSM 1279 RepID=C1XJE3_MEIRU
          Length = 257

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 20/244 (8%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLV--NPLVKPD-------SQAIALAAG 52
           L+NIRIVLV +    N+G+ ARAM+  G+++LWLV   P V+ D       S A  LA  
Sbjct: 4   LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63

Query: 53  ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTL-PWPMLDPRECGLKSVAEAANTPVAL 111
           A DV+    +VDTL EA+A   LVVGT+ R R +   P++ PR   L+    A    VA+
Sbjct: 64  AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123

Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171
           VFGRE  GLT +E+      V I  +P   SLNLA AV ++ YE+            Q  
Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEI--------FGVAQAP 175

Query: 172 HEETPYPLVDD--LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229
               P  L     L++ +  L++ +L  GF  E      + + RRL  +AR    E+ +L
Sbjct: 176 PPPEPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLL 235

Query: 230 RGIL 233
           RG L
Sbjct: 236 RGFL 239


>UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L7Y7_MAGSM
          Length = 258

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 9/235 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
            +L   SH GN+G+  RA+  MG  +L LV P   P     A AAG +  I    + D+L
Sbjct: 15  FILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQVFDSL 74

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNEE 124
           D A A  + +V  + R R     ++ PRE G  L    + A++ V ++FG ER GL   +
Sbjct: 75  DAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTGLETAD 134

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLVD 181
           +++CH+   I  + E  SLNL+ AV ++AYE+ +     Q  GE   H+   +      D
Sbjct: 135 VERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLG----QGLGEVPVHDPQRDDALASQD 190

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           ++ RF+ HL+  L+   FI+ +   Q+M  L+ LF RA  + +E+ ILRGIL  +
Sbjct: 191 EMVRFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEV 245


>UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4
           Tax=Moraxellaceae RepID=Q4FSH9_PSYA2
          Length = 298

 Score =  130 bits (327), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 111/196 (56%), Gaps = 15/196 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +I++V+V T+   N+GS ARAM TMGL+ L +V P +  D+ +++ AAG SD++ +A 
Sbjct: 24  LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDP------------RECGLKSVAEAANTP- 108
           I  TL+ A+A C LV   S+RSR LP P++ P            ++  +    +    P 
Sbjct: 84  IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143

Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
           +A++FGRE  GLTNEEL    YH+ I ANP Y  LN+A AVQVIA  +  A+  T     
Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFI-FAYAQTHIKAN 202

Query: 169 QVEHEETPYPLVDDLE 184
             E    P  + D LE
Sbjct: 203 S-EANNNPLEVTDSLE 217


>UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon
           RepID=D1JIN9_9ARCH
          Length = 234

 Score =  129 bits (323), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 24/240 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS--QAIALAAGASDVIGNAHI 62
           +RI+LVE     N+G+VAR  K  G ++L++VNP   P+   +A+++AA A DV+ +  I
Sbjct: 3   VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNP---PEIGIKALSVAAHAYDVLQSCKI 59

Query: 63  VDTLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
           VD+L  A+A  ++V GT+A+     ++ L  P   P E  LK         ++++FGRE 
Sbjct: 60  VDSLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGRED 117

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
           VGL N+EL+ C   V+I  +PEY  +NL+ AV VI YE+      T E            
Sbjct: 118 VGLLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLELAP--------- 168

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             V+D ER Y  L+  L   G+ RE+   + +  LRR+  RA   ++EL  L+GI+   E
Sbjct: 169 --VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAE 225


>UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus
           RepID=Q1IWV0_DEIGD
          Length = 254

 Score =  128 bits (321), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 9/235 (3%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62
           N+ +VLV     GN+G+ ARAM  MG ++L +V P   P DSQA+A+A  A+D++ +A I
Sbjct: 2   NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             TL EALA   L VGT+AR R  LP P        ++ +  AA+ P ALVFG E  GL 
Sbjct: 62  YPTLREALADRDLSVGTTARLRADLPPPR---HPAQVRPLVRAASAP-ALVFGPEETGLV 117

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N +L++C   V +    EY+SLNLA AV ++ YE   A   T     +    +T     +
Sbjct: 118 NSDLEQCQVTVRV-PTAEYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKTAT--RE 174

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           ++E  YGHL +T+   G+         +   R +  RA   S E  + RG L  +
Sbjct: 175 EMEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQV 229


>UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae
           RepID=Q1D9N7_MYXXD
          Length = 240

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 128/250 (51%), Gaps = 23/250 (9%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  +R VL+   +  N+G+ ARA+K  GL++   V P V+    A  LA  A DV+  A
Sbjct: 1   MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
              DTL+EA+A C  VVGTS+R     R LP     PR  G + VA A   PVALVFG E
Sbjct: 61  RRADTLEEAVADCVWVVGTSSRKVEGKRRLP-----PRAVGEELVARAPQGPVALVFGDE 115

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
           R GLTN E+++ H   A+   PE  S+NLA AV + AYEVR+A L      E       P
Sbjct: 116 RSGLTNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAML------EAAATPPGP 169

Query: 177 YPLV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILR 230
            P      +L +    LE  L   GF+ +  PG+    +R LF    R+R   +E  +  
Sbjct: 170 LPAAATDAELAQVESTLESVLTTGGFLVDAQPGR--TAVRDLFAPLRRSRLTRKEARLWL 227

Query: 231 GILASIEQQN 240
             L S+ ++ 
Sbjct: 228 AALHSLRKRQ 237


>UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LY86_SYNAS
          Length = 263

 Score =  127 bits (318), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60
           L++I +VL    + GN+GS AR  K MG+  L +V+       +   ++   A+DV+ + 
Sbjct: 18  LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L EAL+G + +VGT+AR      P++ PRE   + +  + +  VAL+FG E  GL
Sbjct: 78  VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-YPL 179
           TN++L+ CH  V+I  +  + SLNL+ AV ++ YE+ +A     E G  V    TP    
Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVA-----ETGIPVRF--TPKMAS 190

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
             +LE  YGH+   L   GF+   +P   M  +RRLF+R R +++E+ I+RGI
Sbjct: 191 SRELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGI 243


>UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales
           RepID=A7IP45_XANP2
          Length = 298

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 121/250 (48%), Gaps = 21/250 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+GS ARAM   GL+ L +VNP    P   A   +AGA  ++  A +   
Sbjct: 19  VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT------PVALVFGRERVG 119
           L  AL G +     +AR R +  P+L     G  +VA+ A +       VALVFGRER G
Sbjct: 79  LRSALVGVNYAFAATARERGMAKPVL-----GADAVAQEARSRLAGGEDVALVFGRERTG 133

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L  EE+  C   + +  NP ++SLNLAM V V  YE    W   +  G          PL
Sbjct: 134 LYTEEVSLCDAILTLPVNPAFASLNLAMCVAVTGYE----WFKAETGGALPFAPPDRSPL 189

Query: 180 VD--DLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
            D  DL  F+ HLE  L  +GF R  E  P  + N LR +F R     Q+L  L G + +
Sbjct: 190 ADKGDLLAFFDHLEGALEQSGFFRSPEKAPSTIRN-LRNIFHRLGLTRQDLATLHGAVTA 248

Query: 236 IEQQNKGNKA 245
           +E+   G  A
Sbjct: 249 LEEGRAGRDA 258


>UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium
           HF10_12C08 RepID=A4GJN4_9BACT
          Length = 245

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 7/243 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60
              I I+LV+T    N+G VAR+M   G TNL LV+P ++ P  +A+A+A  A +++ N 
Sbjct: 3   FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +  +L EAL+  S  +G +AR R +     D  +   +   +  N  + +VFG E  GL
Sbjct: 63  KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN+ L      V I  +  +SSLNL+ AV V  Y +      T+   + V+    P+   
Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTE---QLVDKNSEPHGSQ 179

Query: 181 DDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           +DL  F+ HLE+ L + GF +  E  P    N LR +F RA    +E+  LRG++  + +
Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQN-LRNIFHRADLSEREIATLRGVVRVLSE 238

Query: 239 QNK 241
             K
Sbjct: 239 YRK 241


>UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms
           RepID=D0B958_BRUME
          Length = 291

 Score =  123 bits (309), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 123/235 (52%), Gaps = 6/235 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+LV      N+G VARAM   GL  L LVNP  + P  +A A A+ A  VI NA + D 
Sbjct: 32  IILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYDD 91

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNE 123
           L  A+A  + V  T+AR R    P+    E G  L+   +       ++FGRER GL+NE
Sbjct: 92  LPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEK-TGILFGRERFGLSNE 150

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      +    NP ++SLN+A AV +++YE   + L  Q +       E P    ++L
Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237
             F+ HLE+ L   G+ R     ++M N LR + TRA   S EL +LRG++ S++
Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264


>UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio
           RepID=B8DKE7_DESVM
          Length = 266

 Score =  123 bits (308), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 128/252 (50%), Gaps = 23/252 (9%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54
           ML N+ +VLV+T    N+G VARA   MG  ++ LV+P          ++A+ LA     
Sbjct: 1   MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60

Query: 55  DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVF 113
           D++    +V TL EA+A C++V GT+AR+      +L P     ++    A    VA+VF
Sbjct: 61  DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           G E  GLTN+E++ CH  + I   PE SSLNLA AV V+ YE  +   AT        H 
Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYEC-LKGTAT--------HP 171

Query: 174 ETPYPLVD-------DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226
             P P  D       +LE  +  L  TLLA  ++R ++P   M  +RR   R R    E 
Sbjct: 172 FRPGPAPDSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEF 231

Query: 227 NILRGILASIEQ 238
           +++ G+   +++
Sbjct: 232 DLVMGVCRQVKR 243


>UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHT7_SYNFM
          Length = 257

 Score =  122 bits (305), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 8/237 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNA 60
           L+NI IVL E  +  N+G+ AR+ K MG+  L +VNPL     + + +A   A DV+   
Sbjct: 5   LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I D L  ALA    VVGT+AR  +    + +PR+   + V+ +     A++FG E  GL
Sbjct: 65  EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNE+L+ C + V I    +++S+NLA AV ++AYE+  A      N E+ +         
Sbjct: 125 TNEQLRFCDFLVTIPT-ADFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
            +LE  Y  L  TL    FI +++P   M  +RR F+R    + E+ I+RGI   I+
Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQID 234


>UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QKR3_DESAH
          Length = 247

 Score =  122 bits (305), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61
           Q I +VLVE     N+GSV RAM   G + L LVNP    ++  A  +A  A  ++  A 
Sbjct: 4   QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VDTL +AL  C L  GT+ R        L P + G     E      ALV GRE  GL 
Sbjct: 64  VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
             EL+ C   V I     Y S+NL+ A  ++ Y+  MA   T      +    TP     
Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           +L   Y H+ ++L    F+   +P  ++   RR+F RA  + +E+ I+RG++  I+
Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRID 235


>UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata
           obscuriglobus UQM 2246 RepID=UPI00016C4014
          Length = 269

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 121/241 (50%), Gaps = 14/241 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59
           +L   R+VLV   + GN+G+ AR M+  GL++L LV P     D  A  +A     V+  
Sbjct: 4   LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63

Query: 60  AHIVDTLDEALAGCSLVVGTSA------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113
           A +V  L +AL+ C   + TS+      RS T+        E  L + AEA   PVA+VF
Sbjct: 64  ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIGTAAEQMPE--LLAAAEAG--PVAVVF 119

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVE 171
           G E  GL+NEE+ +CH  V + ++P   SLNLA AV +  YE R AW        G+   
Sbjct: 120 GPEPHGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEI 179

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            E    P  D  +R + HL   L   G++       +M+ +R+L  RA P  QE+ IL G
Sbjct: 180 PERAVAPFADQ-DRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHG 238

Query: 232 I 232
           +
Sbjct: 239 L 239


>UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae
           RepID=B8H062_CAUCN
          Length = 263

 Score =  121 bits (303), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++L E     N+GSVAR M   GL++L LV P    P  +A A A+GA   + +A + DT
Sbjct: 13  VILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFDT 72

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124
           L+ A+A   LV  T+AR R    P+  PRE       E A    V L+FG ER GL  ++
Sbjct: 73  LEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETDD 132

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD-- 182
           +  C   V+I  +  + SLNLA AV + AYE    W  TQ++    + E+      D   
Sbjct: 133 IALCQAIVSIPIDERFRSLNLAQAVSINAYE----WKMTQDDRPWRKFEQNVEEPADQAA 188

Query: 183 LERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           L   YGHLE  L   GF    E  P  V N LR    RAR   QE+   RG++ ++ +
Sbjct: 189 LLGLYGHLEDELEKAGFYHPPEKKPSMVRN-LRAPLARARLSDQEVRTFRGVITALSK 245


>UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota
           RepID=Q0W2E0_UNCMA
          Length = 249

 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 24/241 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE +  GN+GSV RAMK  G  +L LV P    +S A A+A+ A D++ +A IV
Sbjct: 8   HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPCELGNS-AKAMASHAQDLLASAAIV 66

Query: 64  DTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           DT++EAL G S++VGT+ +  +     +  P   PRE  LK++ E     VAL+FG+E  
Sbjct: 67  DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NE L+KC   ++I  + +Y  +NL+ AV V+ YE+              + +   + 
Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-------------ADIKGNDFL 171

Query: 179 LVDD--LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           L D    E  Y H+EQ L +  +  +    +    +RR+  RA    +E   L G++  I
Sbjct: 172 LADSEMQEILYQHVEQLLDSINY-ADYKKDKTSLMIRRIIGRAMISPREYFTLMGLIRDI 230

Query: 237 E 237
           +
Sbjct: 231 Q 231


>UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Desulfuromonadales RepID=Q3A4B2_PELCD
          Length = 244

 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 7/247 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
             +I +VLVE     N+GSV RAM   G ++L LVNP+       A  +A  AS ++  A
Sbjct: 3   FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +   L  ALA C+L  GT+ R        L P +   + +       VA VFGRE  GL
Sbjct: 63  RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPL 179
              EL  C   V I  +    S+NLA +V +  YE  R+A +A    G+    + T    
Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSRVAAIAC---GKTAGRKSTSS-- 177

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           +  LE  Y H+  TL   GF+   +P  ++   RR+F RA    +E+ ILRG+ + ++  
Sbjct: 178 IATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWL 237

Query: 240 NKGNKAE 246
           N   + E
Sbjct: 238 NGQRREE 244


>UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISG6_RHOCS
          Length = 266

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 9/240 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G+ ARAM   GLT L LVNP    P+ +A+A +AGA++V+  A +   
Sbjct: 25  VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNEE 124
             EA+A    V  T+AR R +   ++ PR       A  AA   V ++FG ER GL N++
Sbjct: 85  TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLVDDL 183
           +      +++  NP +SSLNLA AV ++AYE    W+   +  E   H  ++P    ++L
Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEW---WMEAAQAEEFYTHTGQSPPATKEEL 201

Query: 184 ERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
              + HLE  L  TGF    +  P  V N +R    RA    QE+    GI+A++  + K
Sbjct: 202 HNLFDHLEGELDQTGFYTHPDKKPSMVRN-VRNTLQRAHMTEQEVRTFHGIIAALVGRKK 260


>UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae
           RepID=B0T711_CAUSK
          Length = 266

 Score =  117 bits (293), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++L       N+G+VAR M   GL +L LV P    P  +A   A+GA+  + NA + DT
Sbjct: 10  VILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNAKVFDT 69

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           L+EA+A   LV  T+AR R    P++ PRE   +   E      V L+FG ER GL  ++
Sbjct: 70  LEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAGLETDD 129

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD--D 182
           +  C   ++I  +  + SLNLA AV + AYE    W  T ++   V+ E+   P  D   
Sbjct: 130 IALCQAIISIPIDERFRSLNLAQAVSINAYE----WKMTVDDRPWVKFEQNVEPPADQSS 185

Query: 183 LERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           L   Y  LE+ L   GF    E  P  V N LR    RAR   QE+   RG++ ++ +
Sbjct: 186 LLGLYAQLEEQLEEAGFYHPPEKKPSMVRN-LRAPLARARLTEQEVRTFRGVVTALSR 242


>UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU
          Length = 231

 Score =  115 bits (289), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 131/252 (51%), Gaps = 32/252 (12%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M  +++I+LVE  + GN+GSVARAMK  G ++L LVNP  +   +A A A+ A D++ +A
Sbjct: 1   MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNP-CELKMEARAFASHAYDILESA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
             V+T++EAL G  LV+ T+  +       +  P   PR+  LK      +  +A++FGR
Sbjct: 60  KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
           E  G TNEEL+     V+I  +  Y  +NL+ AV +I YE  M+ +   EN         
Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYE--MSQILAGENS-------- 167

Query: 176 PYPLVD--DLERFYGHLEQTLLATGFIRENHPGQVMNK----LRRLFTRARPESQELNIL 229
              L D  DL   + H+++ L        ++P     K     +R+F RA+   +E+  L
Sbjct: 168 ---LADGFDLRLLFEHIDEVLDDI-----DYPAHKKEKTHLMFKRIFGRAQLMPREVQTL 219

Query: 230 RGILASIEQQNK 241
           RG +  +++  K
Sbjct: 220 RGFIGKVQKHIK 231


>UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae
           RepID=Q1GGZ7_SILST
          Length = 249

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 19/237 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
            VLV      N+G  ARAM   GL  + +V P    P+ +A+A+A+GA  ++  A +   
Sbjct: 10  FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123
           L EALA C+ V  T+AR R L  P+  P E  +K  AE       VA++FG ER GL N+
Sbjct: 70  LPEALADCTYVFATTARPRELTKPVFSP-EGAMKKAAELMVQGEKVAVLFGPERAGLEND 128

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYP 178
           ++ K +  + +  NPE++SLNLA  V + AYE R          EQV HE     ++ + 
Sbjct: 129 DIAKANAIITVPVNPEFASLNLAQCVLLTAYEWR-------RQQEQVAHETFEIGKSEWA 181

Query: 179 LVDDLERFYGHLEQTLLATG--FIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
              ++E    H E+ L   G  F  E  PG +    R L++R +    ++ +L G++
Sbjct: 182 TNQEVEALVNHYEERLTEAGYFFPPEKAPG-MKTVFRNLWSRMQLTRADVQMLHGVM 237


>UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria
           RepID=A8ZWU6_DESOH
          Length = 260

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 8/233 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS-DVIGNAHIV 63
           I I+LV      N+G+  RAMK MGL+ L +V P      + +  A  A  DV+    IV
Sbjct: 14  ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
                A++  S + GT+AR       +L P     K+V      PVA++FG E  GL NE
Sbjct: 74  GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +LQ CH  V I  + E+SSLNLA AV VI YE+  A    Q      +H +       +L
Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           E  Y  +++ LLA  F+R ++P   MN  RR  +R    ++E+ ++RG+   +
Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQV 239


>UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria
           RepID=Q2RWJ5_RHORT
          Length = 279

 Score =  114 bits (286), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD---SQAIALAAGASDVIGNAHIV 63
           IVLV      N+G VARAM   GLT L LV P  + D    +AIA A+GA  ++  A   
Sbjct: 20  IVLVRPQLAENIGMVARAMLNCGLTALRLVAP--REDWLAEKAIASASGADGLLREARFF 77

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122
           +T + A+A  + V  T+AR R +   +L PR    +   + AA    A++FG ER GL+N
Sbjct: 78  ETTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSN 137

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +++      V +  NP Y SLNLA AV ++ YE   A  AT    EQ+   +T      +
Sbjct: 138 DDVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQAGDATP--AEQLVTNDTQPATRGE 195

Query: 183 LERFYGHLEQTLLATGFIRE--NHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           L  F+ HLE+ L   GF+R     PG V N LR LF RA    QE+  L G++  +
Sbjct: 196 LLGFFDHLERELDDCGFLRNAAKRPGMVRN-LRNLFERADLTEQEIRTLHGVVKEL 250


>UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LVT8_DESBD
          Length = 248

 Score =  112 bits (281), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 4/234 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59
           ML+NI ++L    +  N+GSVARA   MG   + LV P      +A+ LA   A  ++ N
Sbjct: 1   MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERV 118
             I  TL EALA  S   GT+AR+      +  P E   + + ++ A   VA+VFG E  
Sbjct: 61  IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLTNEE   C+  + I      +SLNL+ AV V+ YE     LA  +  +     +  Y 
Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
             ++ E  +  L +TL+   F+ +++P   M  L+R F R  P   E N+L G+
Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGL 232


>UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FH12_DESAA
          Length = 251

 Score =  112 bits (279), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 119/239 (49%), Gaps = 13/239 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60
            + I IVL E     N+G  ARAM  MGL  L +V P      +   +A AGA  +I + 
Sbjct: 7   FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD L  AL   + VVGT+AR  +    M        K ++      VALVFGRE  GL
Sbjct: 67  EVVDDLKTALKEFNWVVGTTARLGSHRKAMT-VENMAAKLISMTGENRVALVFGREDRGL 125

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + E+++ CH  V I     +SSLNLA AV ++ YE+  A       G     E TP  L 
Sbjct: 126 STEDVRLCHQLVNIR-TAGFSSLNLAQAVLLVCYELFKA-------GSDKPRESTP-KLA 176

Query: 181 D--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           +  DLE  Y  L + L+   FI   +P   M+ +RR FTR    ++++ I+RGI   ++
Sbjct: 177 NKFDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVD 235


>UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH
          Length = 384

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 8/241 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61
           Q   IVLV      N+G+ ARAM+  GLT L LV P    P+  A   AAGA DV+  A 
Sbjct: 137 QKPAIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQ 196

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  T  EA+A C+ +  T+ R R +  P++ P E      ++A  +  A++FG ER GL 
Sbjct: 197 VFATTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQAGKS--AVLFGPERSGLE 254

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            E++      + +  +PE+ SLNLA AV + AYE    W    E  +  + +  P     
Sbjct: 255 TEDVALARAILTVPIDPEFGSLNLAQAVILCAYE----WSKGAELEQPTQEDLLPPAPQA 310

Query: 182 DLERFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +L+    HLE  L   G F+  N        LR + T+      E+  LRG+L+S+++ +
Sbjct: 311 ELDDLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGD 370

Query: 241 K 241
           K
Sbjct: 371 K 371


>UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739
           RepID=C6A381_THESM
          Length = 246

 Score =  109 bits (272), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 118/237 (49%), Gaps = 31/237 (13%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62
            ++++LVE  +  N+G++AR MK  G+T+L LVNP V P+++ A   A  A D++ NA I
Sbjct: 2   KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLK-SVAEAANTPVALVFGRERV 118
            ++L+EAL    L +GTS  +     P    + P E   + S+ +     + LVFGRE  
Sbjct: 62  HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRLSIYDGE---IGLVFGRESR 118

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV--------------RMAWLATQ 164
           GL NEEL+K  + V I  + EY  +NL+ AV VI YEV              R+     Q
Sbjct: 119 GLDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKSTRQ 178

Query: 165 ENGEQVEH-----EETPYPLVDDLE--RFYGHLEQTLLATGFIRENHPGQVMNKLRR 214
           E    VE      +   YP   DLE  RFY  + +  L  GFI       +   LRR
Sbjct: 179 EREMLVEFWAKFLDTLEYP--KDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRR 233


>UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5
          Length = 277

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 18/242 (7%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+LVE     N+G VARAM   GL+ L LVNP    P  +A A A+ A  VI    + +T
Sbjct: 17  IILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFET 76

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECG--LKSVAEAANTPVALVFGRERVGLTNE 123
           L+EA+   + V  T+AR R    P+  P      L++  +A      ++FGRER GLTNE
Sbjct: 77  LEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEK-TGILFGRERWGLTNE 135

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYPLVD 181
           E+      V    NP ++SLN+A AV +++YE    W+ +   + GE +       P   
Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYE----WMKSGMDDLGETLFQPIEQRPSTK 191

Query: 182 DLERFYG---HLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
             E+ +G   H+E+ L A G+    E  P  V N LR + +R     QE+++ RG++ S+
Sbjct: 192 --EQVFGLFEHIEEALDARGYFHPAEKKPKMVDN-LRAVLSRRGFSEQEISVFRGVIRSL 248

Query: 237 EQ 238
           ++
Sbjct: 249 DR 250


>UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27
           RepID=C1A9A6_GEMAT
          Length = 283

 Score =  108 bits (271), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 20/252 (7%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  + +VL E+  + N+G V RAMK MG+ +L L+ P     ++   +A    D++   
Sbjct: 5   ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              +T+DEALA C  VVG S R +   W    PR   +  +  A    VA++FGRE  GL
Sbjct: 65  QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124

Query: 121 TNEELQKCHYHVAIAANP--EYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY- 177
            NE L + +   AI   P  E+ SLN+A A  +  YE+ M  LA    G+  +    P  
Sbjct: 125 PNEALDRSN---AICTIPTTEHFSLNVAQACLLALYELHM--LA----GDATKRLPPPRH 175

Query: 178 ----PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG-- 231
               P  DD+ER +  +   L A  +    +   +M   R L  RA P+ +EL ++R   
Sbjct: 176 AAGSPSKDDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTAS 235

Query: 232 --ILASIEQQNK 241
             +L +IE++ +
Sbjct: 236 IEVLRTIERETR 247


>UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae
           RepID=D2PC46_SULIS
          Length = 237

 Score =  108 bits (271), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 34/245 (13%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IR+VLVE     N+G VAR  +   +  L++VNP     S+A   +AG  + +  A IV+
Sbjct: 2   IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60

Query: 65  TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
             DEA+    + + TS+         R    PW +L          +      VALVFGR
Sbjct: 61  NFDEAINDVDIKIATSSIADNNGDILRKSIRPWELL----------SLIQGKKVALVFGR 110

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV----------RMAWLATQE 165
           E VGLT EE+ KC + + I ANP Y  LNL+ AV ++ YE+          + + ++ Q 
Sbjct: 111 ESVGLTREEIFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQS 170

Query: 166 NGEQVEHEETPYPLV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222
                 + E  Y ++   DD  + Y  L++T++  G   E     +++ LR+L+TR    
Sbjct: 171 IKLIDRYAEILYKMLKRSDDDYKMYIALKRTII-KGVKDEEEARVIVHFLRKLYTRIIHN 229

Query: 223 SQELN 227
            +E+N
Sbjct: 230 EKEMN 234


>UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755
           RepID=UPI0000D53114
          Length = 251

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 9/249 (3%)

Query: 2   LQNIR--IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIG 58
           +QN R  ++LVE     N+G+VARAM   GL  L LV P    P+  A A+A+GA +V+ 
Sbjct: 6   VQNNRPVVILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLT 65

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECG-LKSVAEAANTPVALVFGRER 117
           +A + +  ++A+   + +  T+AR R L   ++ P E   L    +     +  +FG ER
Sbjct: 66  SAEVFEQTEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSER 125

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL N+++    Y + +  NPE+SSLNLA AV ++ YE   A L  +    +  + E   
Sbjct: 126 SGLINDDIAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWGNSE--L 183

Query: 178 PLVDDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
             + + E FY  LE+ L   GF+   E  P  +   LR +F++A   +QE+  L GI+ +
Sbjct: 184 STIGEREYFYKRLEKHLDEAGFLYPLELAP-TICRNLRAMFSKATLTNQEIRTLHGIVTA 242

Query: 236 IEQQNKGNK 244
           +      +K
Sbjct: 243 LSNYTPDSK 251


>UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae
           RepID=Q0AQY2_MARMM
          Length = 249

 Score =  107 bits (266), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 23/230 (10%)

Query: 17  NMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSL 75
           N+G+ AR M   GL  L +V+P    P+ +A+ ++AG S V+GNA +   L +A+   + 
Sbjct: 20  NIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEYRLGDAIHDTTR 78

Query: 76  VVGTSARSRTLPWPMLDPREC--GLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVA 133
           +  T+AR R +  P++  RE    +K+  EA    VA++FG E+ GL NE +      + 
Sbjct: 79  LYATTARPRGMEKPVMTAREAVSDMKAAIEAGEK-VAVMFGGEKSGLPNEAVNMADVIIT 137

Query: 134 IAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV---DDLERFYGHL 190
           +  +  +SSLNLA AV VIAYE    W A    GE    E  P   V   +DLER + H 
Sbjct: 138 LPVDRSFSSLNLAQAVAVIAYE----WTA----GEGAPAEFEPVSDVAKREDLERMFEHF 189

Query: 191 EQTLLATGFIRENHPGQ----VMNKLRRLFTRARPESQELNILRGILASI 236
           E  L   GF    HP      ++  LR  F R R   QE+   RG + ++
Sbjct: 190 ETELERAGFF---HPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKAL 236


>UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K0P2_DESAC
          Length = 243

 Score =  106 bits (265), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 7/227 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VLVE    GN+G+V RAM   G+  L LV       S A+  + GA  ++G A     L
Sbjct: 8   VVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPDL 67

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
             ALA     V  + R+  L   +L   E   +  + AA + VA VFGRE  GLT +E+ 
Sbjct: 68  AAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEVA 127

Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERF 186
            C     I    E  SLNLA AV V  YE+           ++V   +   P  D  E  
Sbjct: 128 LCSQAATIETTDETGSLNLAQAVVVTLYEL-------SRRQDRVGIVQRDQPTHDQFEPL 180

Query: 187 YGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
           +  L++ +   G++  + P  +   LRRL  +A P+  ELN LRG++
Sbjct: 181 FQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLI 227


>UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10
           Tax=Halobacteriaceae RepID=B9LNN3_HALLT
          Length = 290

 Score =  106 bits (264), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 116/226 (51%), Gaps = 18/226 (7%)

Query: 16  GNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGA-SDVIGNAHIVDTLDEALA-- 71
           GN+G++ARAMK  GL++L LV+P  +K D +A   A  A  DV+ NA  V T DE +A  
Sbjct: 50  GNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVANY 108

Query: 72  ---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128
              G + + G   +S    +P   P E  L+   +  + P A+VFGRE  GL NEEL + 
Sbjct: 109 HTVGTTAITGEDDQSHER-FPFKTPVE--LRESLKTVDAPTAIVFGREGRGLNNEELSQL 165

Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVR-MAWLATQENGEQVEHEETPYPLVDDLERFY 187
               +I A+ +Y  LNL  A  V+ YE+R +    TQ     V     P     D+ERF+
Sbjct: 166 DEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP-----DVERFH 220

Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
                 L ATG  RE+H  +    +RRL  RA P  +E++ L G  
Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTF 265


>UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter
           asiaticus str. psy62 RepID=C6XG74_LIBAP
          Length = 268

 Score =  105 bits (262), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+LV+     N+G VARAM    LT L LVNP    P  +A + +A A  VI +  +   
Sbjct: 17  IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFGRERVGLTN 122
           L EA+A    +  T+AR+R     +L P+E  +   + +    N  V ++FGRER GLTN
Sbjct: 77  LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQN--VGIIFGRERWGLTN 134

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE+   +  ++   NP + SLN++ AV ++ +E     + + E  + V+ + TP     +
Sbjct: 135 EEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSE--KNVKEQNTP-ATKGE 191

Query: 183 LERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           L  F  +LE +L   G+ R      ++++ L  +F R     +E+ +LRGI++++++
Sbjct: 192 LLSFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDK 248


>UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis
           DSM 2160 RepID=Q3IPH4_NATPD
          Length = 264

 Score =  104 bits (260), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 120/240 (50%), Gaps = 18/240 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGA-SDVIGN 59
           + NI + +V     GN+G++AR+MK  GL+ L+LV+P  + PD +A   A  A  DV+ N
Sbjct: 1   MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60

Query: 60  AHIVD--TLDEAL--AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
           A  V+   L E      C+      A ++ + +P ++P    L       +  V +VFGR
Sbjct: 61  ATEVEFSYLTEQFYTVACTATTNEDA-TKHVRYPFIEP--AALSDELAGLDADVCIVFGR 117

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
           ERVGLTN+EL +     +I A+ +Y  LNLA A  ++ YE+R   +      E+ +H + 
Sbjct: 118 ERVGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTV------EETQHPKQ 171

Query: 176 PYPLVD--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
            +   D  ++E  +    + L   G   E  P +     RRL  RA P  +E   LRG+L
Sbjct: 172 AHERADEHEIEGLHETFSEYLHEVGHPEEKIP-KTERLFRRLAGRASPTGREARTLRGVL 230


>UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus
           RepID=B5IRU8_9EURY
          Length = 245

 Score =  103 bits (258), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 35/247 (14%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD--SQAIALAAGASDVIGNAH 61
            + ++LVE  +  N+G VARAMK   +  L LVNP   P+   +A   A  A DV+ NA 
Sbjct: 2   KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNP---PELRGEAYKFAMHAKDVLENAK 58

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERV 118
           IV T+DEAL    + VGT+  S  +  P    + P E   ++        + + FGRE  
Sbjct: 59  IVKTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAKRAFLYGGK--IGIFFGRESK 116

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR----MAWLATQENG--EQVEH 172
           GL+NEEL+K  + V I  + EY  +NL+ AV V+ YE+      A ++T+EN    +   
Sbjct: 117 GLSNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRHLRKATR 176

Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK------LRRLFTRARPESQEL 226
           EE      D L +++  L +TL        N+P   + +      LRR+  R+   ++E+
Sbjct: 177 EEK-----DILVKYWSELLETL--------NYPKDPIRRKYFTIMLRRVIGRSFIYAREI 223

Query: 227 NILRGIL 233
             L G L
Sbjct: 224 YSLYGPL 230


>UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456
           RepID=A2BNA8_HYPBU
          Length = 239

 Score =  103 bits (257), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 115/230 (50%), Gaps = 16/230 (6%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI 62
            +R+V+V      N+G +AR      +   +LV+P+  P+S +A   AA    ++    +
Sbjct: 8   RVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVIV 67

Query: 63  VDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           VD+L+EAL G  L V TSA+   +  +    + PRE   + +A    + VA+VFGRE VG
Sbjct: 68  VDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFA-EEIAPRYES-VAVVFGRESVG 125

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LT +EL KCH  V I ANP Y  LNL+ AV ++ YE     L     GE+  HE      
Sbjct: 126 LTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYE-----LYNTRRGEKQLHEPAR--- 177

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229
            + LER Y HL  + LA   +      QV   L+ +  R      E ++L
Sbjct: 178 GETLERIYEHL--SWLAEKLVDRERVSQVKAALKHILWRCSITGGEASML 225


>UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus
           profundus DSM 5631 RepID=D2RG27_ARCPR
          Length = 234

 Score =  102 bits (255), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 23/247 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I + LV      N+G VAR MK  G   L+L N   K  + +   A+ A D++ NA ++ 
Sbjct: 2   ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYN--CKVTTVSFKTASHARDILRNAVVLR 59

Query: 65  TLDEALAGCSLVVGTS-----ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             D+ L   +++VGT+     +  R +  P+  P E   ++  E     +A+ FGRE  G
Sbjct: 60  KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEE--FRNFLEGKKGEIAVAFGREDYG 117

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL+ CH  V++  NPEY  +N++ AV VI YE     L+  + G     E+     
Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYE-----LSKGKYGL----EDKTIVT 168

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI----LAS 235
             ++E+   + E+ +L T + R +   +    LRR+  R+    +EL +L GI    L  
Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227

Query: 236 IEQQNKG 242
           I+   KG
Sbjct: 228 IQHLKKG 234


>UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1
           RepID=UPI000038E490
          Length = 236

 Score =  102 bits (255), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 116/235 (49%), Gaps = 20/235 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   G+++L +V   +  +++AI  +     ++ NA I +
Sbjct: 8   ISVVLVEPKYQGNIGAVARSMANSGISDLRIVKTPI--ETEAIYRSMHGRYILDNAKIFN 65

Query: 65  TLDEALAGCSLVVGTSARS------RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +L EA++G  ++ GTS  S      R +P     P E    S        VALVFGRE  
Sbjct: 66  SLKEAVSGFEIIAGTSDISKSGEKFRRVP---TGPEE--FWSTNGLTGQKVALVFGREDN 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL  EEL  C++ + I  NPEY   NL+ AV +I YE+     A       + H+     
Sbjct: 121 GLNYEELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEM---IKANYSGNATITHDLIGRD 177

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
            +D L    G LE+ LLA     E     +MN L R+  RA     E   + GI+
Sbjct: 178 KIDTLA---GRLEE-LLAKIDYNEQEIDTLMNMLNRIIARANITDSEFFKIMGIM 228


>UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma
           RepID=Q9HJF9_THEAC
          Length = 291

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 30/247 (12%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+ IVLV   + GN+G+VAR+M   GL +L ++    +PD +A A + G   ++ NA I
Sbjct: 49  ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGN--RPDDEAFARSMGGRFILENAEI 106

Query: 63  VDTLDEALAGCSLVVGTSARS-------RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
            D     ++  +++  TS+ +       R LP   L P +   +   +     +ALVFGR
Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLP---LTPEKFWEEMSDQGGK--IALVFGR 161

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE----QVE 171
           E  GL NEE++KC+Y + I  NPEY   NL+ AV +I Y V        EN E    + +
Sbjct: 162 EDDGLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIEPD 220

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
           HE+     + ++ R   + E  +  T  +           LRRL  R+R   +E   + G
Sbjct: 221 HEDLMLRNIIEVMRLTSYPEHKIRNTELL-----------LRRLIARSRMSDREYFRMMG 269

Query: 232 ILASIEQ 238
           ++  +++
Sbjct: 270 VIRRVKE 276


>UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F137_ACIC5
          Length = 240

 Score =  101 bits (252), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 11/237 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLV T +  N+G+ ARAM   G  +L +V P      +A + A GA+ ++ +A    
Sbjct: 10  IAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEARS-AVGAASILASARECS 68

Query: 65  TLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           TL +A+A C+ V+GTSA     P  P++D     L  +A+     +ALVFG+E+ GLTN 
Sbjct: 69  TLADAVADCTCVLGTSAIGDRQPLQPIVD-LPAALPWLAQRVAGRIALVFGQEKHGLTNH 127

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL-VDD 182
           +L  C   + I   PE +S+NL  AV V  YE          +G      E P      D
Sbjct: 128 DLSHCDAILRIPTLPEQASMNLGQAVAVCLYEF-------ARSGHAPTATEAPKAAPAAD 180

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           LER    L + L  +G+I+       + + R L  R     ++ ++L G+LA IE++
Sbjct: 181 LERLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERK 237


>UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA
          Length = 234

 Score =  100 bits (250), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 25/248 (10%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE  + GN+G VAR MK  G+  L+LV P  +    AIA A  A D++ NA IV
Sbjct: 2   DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61

Query: 64  DTLDE-------ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           +TL+E       A+A  +++  T AR+  +PW + +         A +    +A+VFG E
Sbjct: 62  NTLEEAIEDVEAAIATTAVLASTPARNPMMPWEVRE---------AFSDYEKIAVVFGPE 112

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL   E++ C   + I  + EY S+NL+ +V V+ YE++      +  G      E  
Sbjct: 113 DRGLRTWEVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKMEYVPERYGRAATKREKE 172

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
             LV  L+     L + L      REN    V    RR   RAR   +E+  L  I    
Sbjct: 173 V-LVKSLD----DLMKALNFDSTRREN----VCTTFRRFLARARCTDKEIKALLWIFEKA 223

Query: 237 EQQNKGNK 244
           +++  G K
Sbjct: 224 KRRVLGVK 231


>UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus
           RepID=Q31MT7_SYNE7
          Length = 245

 Score =  100 bits (249), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 10/234 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62
           ++RIVLVE +   N+G++AR M   GL++  +V P       +A  +A  A+ ++  A +
Sbjct: 2   SLRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVL 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           VD L  AL GC  V  T+ +      P+  P +     +      P AL+FGRE  GL  
Sbjct: 62  VDNLPSALEGCQWVAATTGQRDLRDLPLESPTQI----LPWLRQGPAALIFGREDSGLQR 117

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
            EL     ++    +P Y SLNLA AV +  Y    A L+  ++    + E +P  +   
Sbjct: 118 SELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYH--YACLSEADSRGVPQQESSPAAVRAA 175

Query: 183 LERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
            E+ +G+   LE  LL  G++  +     M K+R +  R+   ++E+ +LRG++
Sbjct: 176 FEQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMV 229


>UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC
           49814 RepID=C6XNM7_HIRBI
          Length = 253

 Score =  100 bits (248), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 9/234 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+LV      N+G+ AR M   GL +L ++NP    P+ +A  ++AGA +    A + DT
Sbjct: 12  IILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFDT 71

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L+  LA  + V+ T+AR R +  P+ +  E G+ ++    +  V ++FG E+ GL NE++
Sbjct: 72  LEAGLADLTYVLATTARPRGMEKPVFNAEE-GIGALMSRPDVGVGVMFGAEKAGLLNEDV 130

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD--DL 183
                 +    +  +SSLNLA AV V A+    +W A    GE  +         D   L
Sbjct: 131 ALADGILTYPVDRSFSSLNLAQAVGVFAH----SWAARTLEGEAKKEFAGVGDSADREQL 186

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASI 236
            R + H E  L   GF        VM + LR  F RA+  +QE+   RG + ++
Sbjct: 187 VRMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKAL 240


>UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales
           RepID=Q28PL2_JANSC
          Length = 258

 Score = 99.0 bits (245), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 15/248 (6%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
            VLV      N+G+ ARAM   GL  + +V+P    P+ +A+ALA+GA  ++ NA +   
Sbjct: 17  FVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQD 76

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNEE 124
           L  AL+ C+ V  T+AR R L  P++ P     ++ A  A    V ++FG ER GL N +
Sbjct: 77  LPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENAD 136

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYPL 179
           +      +++  NP + SLNLA  V + AYE    W   Q  G  V  E     +T +  
Sbjct: 137 IAPADAIISVDVNPAFPSLNLAQCVLLCAYE----W---QRQGSTVAPEVMALAKTDFAS 189

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQ 238
             ++E+   H E+ L   GF         M   LR L+ R      ++  L G++  + +
Sbjct: 190 NLEVEKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVR 249

Query: 239 QNKGNKAE 246
             +G + +
Sbjct: 250 WAEGRRKD 257


>UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VSH2_9PROT
          Length = 293

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 119/236 (50%), Gaps = 6/236 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LV      N+G+ ARAM   GL  L LV P    P++ A A+AAGA++V+    +  T
Sbjct: 41  VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRE-CGLKSVAEAANTPVALVFGRERVGLTNEE 124
           + EA+A C  VV T+AR R +  P+  P +  G   V  A     A++FG E+ GL  EE
Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   H  V I  NP + SLNLA AV V+AYE   A  A         ++E P    +  E
Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYE--WAQAAGAAPLFTSPYQEDPATQAER-E 217

Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQ 239
           + + HL   L   G+   +H  +V+ + LR L   A     EL +L G++   E+ 
Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERH 273


>UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY
          Length = 243

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 87/187 (46%), Gaps = 18/187 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I IV VE   TGN+G +AR M   G  NL LVNP  + D  A   +  A  +I NA 
Sbjct: 8   FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNP-PELDEDAYRFSKHARYIIENAE 66

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRER 117
           I++  +E       +V TS  S   P       L PRE   K    + N  + +VFGRE 
Sbjct: 67  ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWNFSGN--IGIVFGREN 124

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL NEE++KC   + I  + EY  +N+  A  +I YE+ M            + EE   
Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFME-----------KREEEGM 173

Query: 178 PLVDDLE 184
           PL ++ E
Sbjct: 174 PLAEEFE 180


>UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus
           RepID=C5A3L4_THEGJ
          Length = 243

 Score = 98.2 bits (243), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 83/159 (52%), Gaps = 19/159 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VLVE     N+G VAR MK  G + L LVNP +  +S + A+ A   DV+ NA IV+T 
Sbjct: 14  VVLVEPEGPANIGMVARTMKNFGFSRLVLVNPNLSEESYSYAVHA--RDVLKNATIVETF 71

Query: 67  DEALAGCSLVVGT---------SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
           +EAL    L VGT         S R+   PW         L+   +     V L FGRE 
Sbjct: 72  EEALELFDLTVGTTGKPGRRFISYRAPLYPW--------ELRETLKGYTGEVGLFFGRES 123

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           +GL NEEL++    V I  + +Y  +NLA AV VI YE+
Sbjct: 124 IGLKNEELERLDLIVTIPTSEDYPVMNLAQAVAVILYEL 162


>UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae
           RepID=Q1QMV4_NITHX
          Length = 410

 Score = 97.8 bits (242), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 23/248 (9%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G  ARAM    LT L +VNP    P+  A   AAGA  ++ +  + DT
Sbjct: 18  VILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFDT 77

Query: 66  LDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           ++ A+A C+L++ T+AR+       +         +V  AA   V ++FGRER GL NEE
Sbjct: 78  VEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNEE 137

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      +    NP ++SLNLA AV ++ YE    W       + V     P+ + +  E
Sbjct: 138 VAMADRIITYPVNPGFASLNLAQAVLLMGYE----WF------KLVTRAALPFAMPERSE 187

Query: 185 R--------FYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
           R        F+ +L   L    F+R  E     ++N LR +FTR  P  Q+++ L G++ 
Sbjct: 188 RASQHQMQAFFDNLVSELDKVEFLRPAEKRDTMLVN-LRNIFTRMEPTKQDMHTLHGVVM 246

Query: 235 SIEQQNKG 242
           +I +  KG
Sbjct: 247 AIAEGRKG 254


>UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12
           Tax=Methanococcales RepID=Y1476_METJA
          Length = 230

 Score = 97.8 bits (242), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 5/159 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  I ++LV   ++GN+GS+AR M   G   L +V      +++A  +A  A +++ NA
Sbjct: 1   MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTS-AR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
              +T DEA+     V+ TS AR   R L    + P+E   K +    N  + +VFGRE 
Sbjct: 61  KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEVKGN--IGIVFGRED 118

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            GL NEE+ KC   V+I  + +Y  +NL+ AV VI YE+
Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEI 157


>UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO
          Length = 235

 Score = 97.4 bits (241), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   GLT+L +V   +  D++  A+      ++ NA I +
Sbjct: 7   ISVVLVEPKYQGNIGAVARSMANSGLTDLRIVKTPIDEDARRRAMHGLY--ILDNARIYN 64

Query: 65  TLDEALAGCSLVVGTSARSRT------LPW-PMLDPRECGLKSVAEAANTPVALVFGRER 117
           + D+A++G  ++ GTS  S++      +P  P       GL          VALVFGRE 
Sbjct: 65  SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFWDNYGLNG------KRVALVFGRED 118

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            GL N EL KC++ + I  NPEY   NL+ AV +I YE+
Sbjct: 119 NGLNNYELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEM 157


>UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter
           RepID=Q4FLI9_PELUB
          Length = 237

 Score = 97.4 bits (241), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 10/241 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60
             NI  +L +   + N+G+ ARA+K      L +V P  + P+ + +A + GA D+I NA
Sbjct: 3   FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + +TL+ A+     VV TSAR R      ++  +  LK +    N  +A +FG E  GL
Sbjct: 63  KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD--LKKID--FNKKIAFLFGSEASGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N E+   +Y + I  NP++ SLNL+ +V +IA+ V  A +   +  +  + ++      
Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176

Query: 181 DDLERFYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            D++       + L    F +  E  P  + N LR +F++     +E  IL  + AS+ +
Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLEN-LRSIFSKMELSEKETRILSSVFASLSK 235

Query: 239 Q 239
           +
Sbjct: 236 K 236


>UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella
           RepID=A1S6F2_SHEAM
          Length = 225

 Score = 97.1 bits (240), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 1/150 (0%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           + +VLVE +   N+G+ ARAMKTMG T L L+      + +A  +A GA+D++ NA ++D
Sbjct: 2   LSVVLVEPARAANVGAAARAMKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLD 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           + D+  A   L++ T+AR R  P   L+P E  + ++ ++    +ALVFGRE  GL+N+E
Sbjct: 62  SFDDLRAEFDLLIATTARERGSPRTFLNPEELAI-TLGQSGAQSMALVFGRESSGLSNQE 120

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
           L +C     +    +Y SLNL  AV V  Y
Sbjct: 121 LSQCDLFSYVPLAGDYPSLNLGQAVMVYTY 150


>UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales
           RepID=B7KUQ9_METC4
          Length = 245

 Score = 96.7 bits (239), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 10/240 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G  ARAM   GL+ L LV P    P       A+GA+ V+  A +  T
Sbjct: 6   VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123
           L EA+A    ++ T+AR R     +  P E  + + AE       V L+FGRERVGL+N+
Sbjct: 66  LPEAIADLHFLLATTARERGQMKRVFAP-EDAMAATAERIGRGERVGLMFGRERVGLSND 124

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLAT-QENGEQVEHEETPYPLVD 181
           E+      V      E+ SLNLA AV ++ YE  R A LAT + +GE +    +P    +
Sbjct: 125 EVSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRAAGLATLRFSGEML----SPPATRE 180

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            +   +  LE+TL   GF        +   +R +  R     Q++   RG L ++ ++ +
Sbjct: 181 AMLSLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKAR 240


>UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii
           ATCC 17100 RepID=D2LIP4_RHOVA
          Length = 263

 Score = 96.3 bits (238), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 120/244 (49%), Gaps = 13/244 (5%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+LVE     N+G+ ARAM   GL  L LV P    P+  A A AA A +++  A +   
Sbjct: 12  IILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYPD 71

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123
           L  A+A    +V T+ARSR L  P+L P +  +  +AE  AA+    ++FG+ER GL N 
Sbjct: 72  LATAVADLHYIVATTARSRFLAKPVLAP-DTAVTEIAERQAADLRCGVLFGKERTGLENS 130

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175
           ++      +    +P ++SLNLA +V + AYE R           L     G     + +
Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190

Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILA 234
                 +L  FY HLE  L   GF+      + M N +R +F R  P  QE+  LRG++A
Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250

Query: 235 SIEQ 238
            + +
Sbjct: 251 ILRR 254


>UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5
           Tax=Methanomicrobiales RepID=A7I6L8_METB6
          Length = 261

 Score = 96.3 bits (238), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 123/246 (50%), Gaps = 31/246 (12%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +  I IVLV   + GN+G  AR MK  G T L LV+P      +A   A+ A DV+GNA 
Sbjct: 1   MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDP-CPLGEEAKGRASHAQDVLGNAE 59

Query: 62  IVDTLDEALAGCSLVVGTSAR-SRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRE 116
           I  T+++  A  S+VV T+ + S+++  PM      PRE  L+     A   V+++FGRE
Sbjct: 60  IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRE--LRERIGIAEGRVSILFGRE 116

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL N+E+++      I  + EY  +NL+ AV ++ YE  +A L +            P
Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYE--LANLPS-----------AP 163

Query: 177 YPLVDDLE--RFYGHLEQTLLAT---GFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
           Y L    E    Y H+++ L +     F REN     M  +RR+  RA   S+E + + G
Sbjct: 164 YRLATPYEMGHLYRHIDRFLDSVHHPAFKREN----TMIMIRRILGRACLTSREASTVHG 219

Query: 232 ILASIE 237
           +L   E
Sbjct: 220 LLRRTE 225


>UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67P01_SYMTH
          Length = 257

 Score = 95.5 bits (236), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 2/165 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + +VL +     N+ ++ R M   GL++L LV P      +   +A     +I    
Sbjct: 8   LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              TL+ ALA C L +GT+ R R     +L PR      + +A    VA++FG ER GL 
Sbjct: 68  RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
           N  L  CH  + I  +P   SLNLA A  VIAYE+ MAW  TQ N
Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAW--TQPN 170


>UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas
           RepID=A0KMM3_AERHH
          Length = 230

 Score = 95.1 bits (235), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 83/153 (54%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLV  +   N+G+ ARAMKTMG   + LV   V  + +A  +A GA +V+  A   
Sbjct: 2   KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           DTL+EALA   LVV T+AR R      L P E   +  A+ +   VA+VFG E  GL+NE
Sbjct: 62  DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           +L +      +     Y SLNL  A+ + AYE+
Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYEL 154


>UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus
           placidus DSM 10642 RepID=C8S7Y1_FERPL
          Length = 230

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 22/234 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G   L L N  V  +S   A  A A DV+  A  V+
Sbjct: 2   IEVVLVELKIPENIGFIARVMKNFGFEKLVLYNCNVSKESYITA--AHAKDVLDKAVKVE 59

Query: 65  TLDEALAGCSLVVGTS-ARSR----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
            L E L   +LVVGT+  RSR     +  P   P E     + E      A++FGRE  G
Sbjct: 60  NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEE-----LREMIKGETAILFGREDYG 114

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L +EEL+ C+  V++  + EY  +N++ A  VI YE+            + E E+     
Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSKG---------KFEFEKEEIAT 165

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
             D++R   + E+ L+ + +  E+  G++   L+R F RA     E++ + GI+
Sbjct: 166 QKDVDRLVEYFEK-LMKSIWFPEHRIGRMKVVLKRAFGRAALTKYEVDAISGII 218


>UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans
           DSM 12444 RepID=Q2G643_NOVAD
          Length = 251

 Score = 94.0 bits (232), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 26/244 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           IVLV      N+G  ARAM   GL  + LV+P    P+  A   AAGA  V+  A +  T
Sbjct: 13  IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L EA+A CS V  T+ R R +  P+L P +     V+ +  +  A++FG ER GL  +++
Sbjct: 73  LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIVSASGRS--AIIFGPERSGLETDDV 130

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL-- 183
                 V +  NPE+ SLNLA AV + AYE    W          +H +   P V+D+  
Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYE----W---------SKHVDLVQPTVEDMLP 177

Query: 184 ----ERFYGHLEQ--TLLATG--FIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
               E F G  EQ  T+L     F  E+        LR + T+      E+  +RG+L++
Sbjct: 178 PAPQEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSA 237

Query: 236 IEQQ 239
           + ++
Sbjct: 238 LRRK 241


>UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30
           Tax=Enterobacteriaceae RepID=C9XV28_CROTZ
          Length = 239

 Score = 93.6 bits (231), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 1/156 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + I+LV  +   N+G+ ARAMKTMG T L +V      D  A  +A GA D++ N  
Sbjct: 11  LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120
             DTL  AL      V T+ARSR        P++       +AA  PV ALVFGRE  GL
Sbjct: 71  RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           TNEEL        +    +Y SLNL  AV V  Y++
Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQL 166


>UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae
           RepID=Q1DAL2_MYXXD
          Length = 243

 Score = 93.2 bits (230), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 5/223 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           + + +VL +T  T N+G+VAR M   G + L L  P++K    A  LA  +  V+    +
Sbjct: 5   EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              L EAL  C   VGT++R++     +L P E   +   E+    VALVFG E+ G+++
Sbjct: 65  TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           E+L +C   +AI  +    S+NLA +  V+ Y      L           EE P   +  
Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLTP-----TAAVEEAPGAKLGT 179

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225
           L      +   +L   F+    P  V+N+L +   RAR   +E
Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQRE 222


>UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VNS2_ALCBS
          Length = 223

 Score = 92.4 bits (228), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 5/156 (3%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE +   N+G+ ARA+KTMG + L LVNP     + A  +A  ++DV+  A IV
Sbjct: 2   DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNP--GDMTAAHWVAHHSNDVLEQAMIV 59

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVGLT 121
           D+L +AL    L +G +AR R      +D   C    VA   N+   VA+VFGRE  GLT
Sbjct: 60  DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCA-ALVAGKGNSVQRVAIVFGREASGLT 118

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
            +EL  C    +I    +  SLNLA AV + A+E+R
Sbjct: 119 GDELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELR 154


>UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii
           RepID=A8J9D1_CHLRE
          Length = 154

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 2/152 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G+ ARAMK  GL +L +V P    P+  A+A ++ A+D++  A + D+
Sbjct: 3   VILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYDS 62

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNEE 124
           ++ A+A    V   +AR+R +  P +  ++    +   AA  P A L+FGRE  GLTNEE
Sbjct: 63  VEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNEE 122

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           +   +  + I ANP Y  LNLA A+  ++YE+
Sbjct: 123 VALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154


>UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms
           RepID=A5GRX6_SYNR3
          Length = 248

 Score = 91.7 bits (226), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 113/237 (47%), Gaps = 9/237 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59
           M  ++ +VLVE S   N+GSVAR     G+ +L LV P   P D QA  +A    + +  
Sbjct: 1   MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--VALVFGRER 117
             +  +L++A+A C  VV  S R        L P+   L+ + E    P  VALVFGRE 
Sbjct: 61  CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQP-ALQWLLEPKPGPNHVALVFGRED 119

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQV-IAYEVRMAWLATQENGEQVEHEETP 176
            GL + EL      + I  +  Y SLNL+ AV + +A   R+A +      +       P
Sbjct: 120 HGLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS----SPP 175

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
            P    LE      E+ LL  GF+  +     M KLR+L  R+ P   E+ +LRG++
Sbjct: 176 LPAHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMV 232


>UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum
           cryptofilum OPF8 RepID=B1L7Q2_KORCO
          Length = 246

 Score = 91.7 bits (226), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 19/239 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + ++ ++LVE     N+G +ARAMK  G   L +V P+ +   +AIA A  A DVI    
Sbjct: 1   MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60

Query: 62  IVDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           I+ TL+EA  G  L++GT+AR SR        P    L S+  + +    LV GRE +GL
Sbjct: 61  ILTTLEEARRGVDLMIGTTARVSRYSVERRAIPIRDLLSSI--SWDAVYGLVLGRESIGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           T EEL  C     I ++ +Y +LN+A A  +I YE  +A+    ++  + E +  P    
Sbjct: 119 TTEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAF----KDSSRFEVKPVPREAR 174

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARP-------ESQELNILRGI 232
           + + R+ G +   L   G +R+    + +  +RR+  R  P        SQ L I++ +
Sbjct: 175 EVMIRYIGEVIDLL---GGMRDRE--RFLFTMRRMIERTFPCGISEEEASQALGIIKAV 228


>UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DMM1_STAMF
          Length = 231

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 24/243 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +R+VLV    + N+G +AR     G+  L+LV P    + +A+  AA ASD +  A IVD
Sbjct: 3   VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADLE-EALRYAAKASDYLKKAIIVD 61

Query: 65  TLDEALAGCSLVVGTSARSRTL------PWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            L +A+    LVV T+A+  ++        P+ D  E     + +     +A++FGRE  
Sbjct: 62  DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVE-----MVKGRVNRLAILFGREST 116

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLT +EL+     V I ANPEY  LNL+ AV V  +E+   W     N   V  E  P  
Sbjct: 117 GLTRKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEI---W-----NIRGVRAENIPPS 168

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI----LRGILA 234
              D   F   L   +     +++    ++M   +++  R+R    E  +    LR +L 
Sbjct: 169 AGRDEIEFILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLG 228

Query: 235 SIE 237
            +E
Sbjct: 229 KLE 231


>UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria
           RepID=B8EQU7_METSB
          Length = 281

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 124/250 (49%), Gaps = 17/250 (6%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNP------LVKPDSQAIALAAGASDVIGNA 60
           I+LV      N+G  ARAM   GL++L LV+P             A A AAGA  ++  A
Sbjct: 19  IILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEGA 78

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVG 119
            + DT +EA+A  + V  T+AR R    P+L P E     ++A A      ++FG ER G
Sbjct: 79  KLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERTG 138

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL--ATQENGEQVEHEETPY 177
           L+N+E+      +    NP Y+SLNLA AV +I YE    W+  +T+     V    +P 
Sbjct: 139 LSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYE----WMRASTEAKAPFVADPRSPP 194

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASI 236
              + +  F+ +LE  L   GF R      VM + ++ +F R    +Q+++ LRG +  +
Sbjct: 195 APREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRGAIVRL 254

Query: 237 EQQNKGNKAE 246
            +   G +AE
Sbjct: 255 VE---GPRAE 261


>UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum
           pendens Hrk 5 RepID=A1RXM1_THEPD
          Length = 257

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + + + +  VE  +  N+G +AR+MK   L  L+LV P      ++   A  A+D++ NA
Sbjct: 12  LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWP-MLDPRECGLKSVAEAANTPVALVFGRERVG 119
            IV +L E +    LV  T+      P    + P E  + S+   +     +V GRE  G
Sbjct: 72  VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGE--MASLFAESTGSKLVVIGREDWG 129

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ EEL  C   V I ANPEY SLN + A  ++ YE+   + + Q++ E+        P 
Sbjct: 130 LSAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLER--------PP 181

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
            +++E F  HL       G+  E    +++  ++RL    R    +L IL G++
Sbjct: 182 REEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLV 234


>UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus
           RepID=Q46JZ1_PROMT
          Length = 245

 Score = 90.5 bits (223), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 12/237 (5%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAH 61
           + ++++LVE +   N+GSVAR  +   +  L LV+P     +Q A  +A     ++  A 
Sbjct: 5   KTLKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAK 64

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERV 118
           + + L+ AL+ CS ++ T  R      P+    D    GLKS  E     +ALVFGRE  
Sbjct: 65  VYEDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSERE---DTIALVFGREDR 121

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPY 177
           GL+NEEL K +  +++  + +Y SLNL+ AV ++ ++  ++  L   +   ++    +P 
Sbjct: 122 GLSNEELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQLNDLDLLKRHTKI---SSPA 178

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
            L+  LE         LL  GF+ ++     M K+++L  R   +  E+ ++RGI++
Sbjct: 179 NLI-KLEDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIIS 234


>UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio
           alkaliphilus AHT2 RepID=C8R186_9DELT
          Length = 304

 Score = 89.7 bits (221), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 102/227 (44%), Gaps = 4/227 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVDT 65
           IVL       N+GS AR    MG+ +L +V        + +  A   A+ +I       T
Sbjct: 19  IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           + EALA    V+ TSAR          PR     ++   A   VAL+FG E  GLTNE+L
Sbjct: 79  VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
             CH    I    ++SSLNLA AV V+ YE+  A    Q     V         V +LE 
Sbjct: 139 YLCHQLTTIP-TADFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195

Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
            YGH+EQ L   GF+R       M  +R L  R    ++E  ++RG 
Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGF 242


>UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae
           RepID=A5UK71_METS3
          Length = 301

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 33/250 (13%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61
            NI IV VE    GN+G +AR M   GL NL L+NP  + P  +A   A     ++ NA 
Sbjct: 68  NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPTLTP--EAFYQATHGKYIVDNAK 125

Query: 62  IVDTLDEALAGCSL-----VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           I  TLDE      +       G +  S  L    + P   G K++    N   A++FGRE
Sbjct: 126 IYHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLG-KNIN--TNNKTAILFGRE 182

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV--RMAWLATQ--ENGEQVEH 172
             GLTNEE++ C   V+I  +P Y  LN++ A  +I YE+   M     +  E    +E 
Sbjct: 183 GNGLTNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMHEYPVEGLEESTAIEK 242

Query: 173 E---ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229
           E   +  Y L+D L+               I E+     +   + +  RA    +E + L
Sbjct: 243 EYVLKDMYDLIDGLD---------------IPEHKKKNGLKSFKNIINRAYITGREAHTL 287

Query: 230 RGILASIEQQ 239
           +GIL  ++ +
Sbjct: 288 KGILRRLKMK 297


>UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY
          Length = 235

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 19/161 (11%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G + L L+NP +  +S A A+ A   DV+ NA I+D
Sbjct: 2   ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPNLTEESYAYAVHA--RDVLENALILD 59

Query: 65  TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
           + ++AL      VGT+          R+  +PW ++         + +     V + FGR
Sbjct: 60  SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELV--------GLIKDYPGEVGIFFGR 111

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           E +GL NEEL      + I  + EY  +NLA A  V+ YE+
Sbjct: 112 ESIGLKNEELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYEL 152


>UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X0D5_DESRD
          Length = 256

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 10/242 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59
           +L N+ +VL +     N+GS ARA   +G  NL LV P      +A  LA G   +V+ +
Sbjct: 7   LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERV 118
             +   L  AL+    V GT+AR+      +  P +       + AA   VA+VFG E  
Sbjct: 67  LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NEE+  C   + I    E +SLNL+ AV ++ YE    W     +G++      P  
Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYE----WFKA-SSGKRFLRTTPPQS 181

Query: 179 LV---DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
            +   ++ E     +++ LL   F ++++    M  +RR F R      E N+L GI   
Sbjct: 182 RLCTHEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQ 241

Query: 236 IE 237
           ++
Sbjct: 242 VK 243


>UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria
           RepID=Q02AK8_SOLUE
          Length = 252

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 7/234 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           N+R+VLV T +  N+G+ ARAM   G + L +V P      +A + A GA+ ++  A   
Sbjct: 19  NLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREARS-AVGAAPLLQKAEEF 77

Query: 64  DTLDEALAGCSLVVGT-SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            ++  A+A C LVVGT S   R L  P+          +      PVAL+FG E+ GL+N
Sbjct: 78  PSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLSN 137

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           E+L  CH+ + I    +  S+NL  AV +  YE+     A   + E++           +
Sbjct: 138 EDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYELARDPKAALASPEKIRSANA-----GE 192

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           LE+    L + L  +G++          K+RRL  R     ++  ++ G+L  I
Sbjct: 193 LEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQI 246


>UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2
          Length = 241

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 100/240 (41%), Gaps = 22/240 (9%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NI  VL E     N+GS  RA+   G   L LV P+     +   +A  +  ++   
Sbjct: 5   IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSR----TLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
               +L EALA  S VVG S RSR     +  P   P    L     AA  PVA VFGRE
Sbjct: 65  ETFASLGEALANVSYVVGFSGRSRGERQAVSLPEFAPTLTAL-----AATAPVAFVFGRE 119

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL N  +++C   ++I  +P Y SLNLA AV +  Y +R         G     E  P
Sbjct: 120 DRGLDNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIR---------GLATSAEPLP 170

Query: 177 YP-LVDDLERFYGHLEQTLLATGFIRENHPGQ---VMNKLRRLFTRARPESQELNILRGI 232
            P L D             L T        GQ    +  +R L  R+RP   E+ ++  I
Sbjct: 171 SPDLADQASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAI 230


>UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97
           Tax=Enterobacteriaceae RepID=LAST_ECOLI
          Length = 228

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I I+LV  +   N+G+ ARAMKTMG ++L +V+     +     +A G+ D+I N  +  
Sbjct: 3   ITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFP 62

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRE-CGLKSVAEAANTPVALVFGRERVGLTNE 123
           TL E+L      V T+ARSR        P E   L     +  +  ALVFGRE  GLTNE
Sbjct: 63  TLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNE 122

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           EL        +    +Y SLNL  AV V  Y++
Sbjct: 123 ELALADVLTGVPMVADYPSLNLGQAVMVYCYQL 155


>UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q8Q0_DESAH
          Length = 226

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 28  MGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVDTLDEALAGCSLVVGTSAR---S 83
           MGL  L +V P     ++A   A   A+ ++    I  TL +ALA    VVGT+AR    
Sbjct: 3   MGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLGGQ 62

Query: 84  RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSL 143
           R +      PR   L+      N  VAL+FG E  GLTN E+  CH  + I     +SSL
Sbjct: 63  RLVE----SPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIP-TLGFSSL 117

Query: 144 NLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL--VDDLERFYGHLEQTLLATGFIR 201
           NLA AV ++ YE+ +A     + G  +E ++    L  V +LE  Y  L   L   G++ 
Sbjct: 118 NLAQAVVIVCYELLVA--VEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVN 175

Query: 202 ENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
             +P   +N++R+  +R + ++ E  I++G++  I
Sbjct: 176 PENPDFWLNRVRQFLSRIKIQAGETGIVKGVIDRI 210


>UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5
          Length = 233

 Score = 85.5 bits (210), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 14/236 (5%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I+L+      N+G+ ARAMK  GL  L +V P    P+ QA + A GA ++I +A I D+
Sbjct: 8   IILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKIFDS 67

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L++++     +  T+   R +    +  +   L       +  V ++FGRE  GL+NEE+
Sbjct: 68  LEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLDY---PNSEKVGIMFGRENNGLSNEEI 124

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
              +  + I    ++SSLN+A AV +I YE     L       +  H        +++E 
Sbjct: 125 AFANKIITINTT-KFSSLNIAQAVIIICYE-----LFRNSTPREDVHNIQKLATKEEIEH 178

Query: 186 FYGHLEQTLLATGFIR--ENHPGQVMNKLRRLFTRARP-ESQELNILRGILASIEQ 238
           F  +L   L   GF +  +  P    N +  +FTR     S E+  L+GI+ S+ Q
Sbjct: 179 FLVNLFGKLDKAGFFKAPDKKPAMQQN-ITNIFTRINSLSSPEVQTLQGIIKSLNQ 233


>UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter
           RepID=B4UHH1_ANASK
          Length = 269

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 24/256 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------KPDSQAIA--------- 48
            IR+VL       N+G+ AR MK  GL+ L +V P         P + AI          
Sbjct: 5   KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64

Query: 49  --LAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARS-RTLPWPMLDPRECGLKSVAEAA 105
             +A  ASD++  A I   L  A+   + V GT++R+    PW  L+PR    + V  +A
Sbjct: 65  RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRAVEGRPW--LEPRGLAAELVRRSA 122

Query: 106 NTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
           +  VA+VFG ER GL++ EL+ C     I     Y S+NLA AV V+AYEV  A      
Sbjct: 123 DGEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGA 182

Query: 166 NGEQVEHE---ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222
              +       + P   ++ +E  +   +  L A G++   +P  ++   RRL  RA P 
Sbjct: 183 APAEAPPGRGGDAPA-RIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPT 241

Query: 223 SQELNILRGILASIEQ 238
            +E+ +L G L S+++
Sbjct: 242 QREVELLLGALRSLDR 257


>UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis
           KIN4/I RepID=A8A8Q9_IGNH4
          Length = 228

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 110/245 (44%), Gaps = 38/245 (15%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62
            +R+VLVE     N G + R  K   +  +  V P     D + +  AA   D +    +
Sbjct: 2   KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61

Query: 63  VDTLDEALAGCSLVVGTSA--------RSRTLPWPMLDPRECGLKSVAEAANTP--VALV 112
           VD   EAL G  LVV TSA        R   LPW +            E    P  + LV
Sbjct: 62  VDDYKEALEG--LVVCTSAKVSSADPLRDFVLPWEL-----------KEKFGEPERLTLV 108

Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ-ENGEQVE 171
           FGRE VGLT EEL++C   + + A+P+Y  +NL+ AV V+ +EV   W   + E G Q E
Sbjct: 109 FGRESVGLTREELKECDALLHVPASPQYPVMNLSHAVAVVLWEV---WKQYRIEKGAQPE 165

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILR 230
                 P   DL    G  E+  LA   I+ E    +V   ++RL  +A    QEL  L 
Sbjct: 166 R-----PDERDLRLALGVAER--LARALIKDEAKRERVTVAIKRLLAKA--TRQELRNLL 216

Query: 231 GILAS 235
            +L+ 
Sbjct: 217 YLLSK 221


>UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter
           aquaeolei VT8 RepID=A1U6V8_MARAV
          Length = 226

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 7/166 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLVE     N+G+ ARA+ TMG + LWLVN  +    +A  LA G+  ++ NA I 
Sbjct: 2   KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120
             L        L++GTSA+ R       +P    L+SV       V   ALVFGRE  GL
Sbjct: 62  PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
            NEEL  C           Y SLNL+ AV + A+E  ++ LA Q N
Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWE--LSGLARQSN 163


>UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RQC6_FIBSS
          Length = 269

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 113/250 (45%), Gaps = 33/250 (13%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD---SQAIALAAGASDVIG 58
           ++  R+VLVE  H  N+G VARAM    L  L++V P  K D    ++   AA + D++ 
Sbjct: 1   MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYP--KRDKVLDKSYHTAANSHDILD 58

Query: 59  NAHIVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           NA +V   ++A+  CS  V  S R  + ++   M+      L  +     T +ALVFGRE
Sbjct: 59  NAKVVHKFEDAIGDCSCAVAYSRRIFASSIKHTMVQ----NLSDMLPEDGT-IALVFGRE 113

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHE-- 173
             GL  EE+  C Y   I   P   SLNL  AV +  YE+ R   LA  E   +      
Sbjct: 114 SCGLALEEVNACTYQCEIPV-PGLMSLNLGQAVSISLYELCRSGALANGEGRAKRTTRGV 172

Query: 174 -ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNK------LRRLFTRARPESQEL 226
            ET    +  ++ F   L++ L           GQ  ++      L  L  R  P   EL
Sbjct: 173 AETGPATIQQIDGFKKFLDRYLT----------GQYHDQAWRDSFLNTLLQRLHPTRNEL 222

Query: 227 NILRGILASI 236
           + L G+L ++
Sbjct: 223 SALFGLLRNL 232


>UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n
           RepID=B8D6J8_DESK1
          Length = 234

 Score = 84.0 bits (206), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +RIVLV      N+G +AR      +  L++V P V    +A+  AA   D +  A + D
Sbjct: 2   LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKP-VASIEEALNYAARGKDFLLKARVTD 60

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA---NTPVALVFGRERVGLT 121
           +LDEA+ G  +V  TS    +    ML  +   L   AE        VA++FGRE  GLT
Sbjct: 61  SLDEAIKGVDMVAATSDEGYSAG-DMLR-QAVDLNGFAEKIFPRTRSVAILFGRESTGLT 118

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            EE+ K    V I ANP Y +LN++ AV ++ +E+      T  N   +  +ET   L+D
Sbjct: 119 REEISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIPPLASKETLRQLLD 178


>UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira
           thiodismutans ASO3-1 RepID=C0GN85_9DELT
          Length = 252

 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 22/247 (8%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60
           + NI ++L    ++ N+GSVARA   MG + L +         +A  LA    ++++ + 
Sbjct: 1   MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60

Query: 61  HIVDTLDEALAGCSLVVGTSAR------SRTLPWP----MLDPRECGLKSVAEAANTPVA 110
                L++AL G   V  TSAR         LPW     ++ P         E  +   A
Sbjct: 61  EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRP---------ETLDQDTA 111

Query: 111 LVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV 170
           LVFG E  GL N E++ C   ++I    +  SLNL+ AV ++ YE      A +     +
Sbjct: 112 LVFGPEDKGLANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFKHVPAART--RHI 169

Query: 171 EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230
              ++P    + ++  + ++++TLL   F++ ++P   M  L+R   +      E N+L 
Sbjct: 170 PSWDSPPVTQEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLM 229

Query: 231 GILASIE 237
           GI   I+
Sbjct: 230 GICRQIK 236


>UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus
           RepID=Q31AG9_PROM9
          Length = 249

 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 8/238 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60
             N++++LVE +   N+GSVAR      +  L +V+P     S +A  +A      + + 
Sbjct: 7   FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV--AEAANTPVALVFGRERV 118
            I D L+ A+  C LV+ +  R       + +  E  +  +   E  N  +A++FGRE  
Sbjct: 67  KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINN-LAIIFGREDR 125

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+N EL   +    I  +    SLNL+ AV ++ YE+     +++ N  + E E     
Sbjct: 126 GLSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNK---SSKRNFNK-ELEVFNLA 181

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               +   +  +E+ LL  G++ E+     ++K +   +RA     E+N+LRGI+  I
Sbjct: 182 SSKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQI 239


>UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIE5_9BACT
          Length = 278

 Score = 83.6 bits (205), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 7/232 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I ++LVE  + GN+G++AR M     ++L +V  +  P+     LA  + +++ N +
Sbjct: 7   FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKV--PEKNDFYLAMHSEEILENVN 64

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           I  TL++A+ G   V+  S R          P +   K V    ++ + LVFGRE  GLT
Sbjct: 65  IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           + E + C       ANP + SLNLA AV +  +E+       ++ G++  +  +      
Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYYNSASG----K 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
           +L+    ++ + +   GF +          L ++  +  P+   L  LR + 
Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMF 231


>UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix
           RepID=Q9YEM3_AERPE
          Length = 243

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 17/166 (10%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ +RIVLVET    N+G VAR  +      ++LV+P    + +A   AA A+  +  A 
Sbjct: 1   MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASLE-EAKRYAARAAWRLDAAR 59

Query: 62  IVDTLDEALAGCSLVVGTSA--------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113
           +V  L+EAL G S  + TS+        R+   PW   +        V  A    VA+VF
Sbjct: 60  VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAE--------VLAATPGTVAIVF 111

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           GRE VGLT  E+  C  + +I A+P Y SLNL+ A  +  YEV  A
Sbjct: 112 GRESVGLTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKA 157


>UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BT47_TERTT
          Length = 233

 Score = 81.3 bits (199), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +  +LV  +   N+G+ ARAMKTMG   L LV   +  D +A  +A GA D++ +A    
Sbjct: 2   LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L        L++GT+AR R      L P E  L S     +    LVFG E  GL+N++
Sbjct: 62  DLASLKPDFDLLIGTTARERGSARRYLSPPE--LNSQLSQQSGRSGLVFGCEASGLSNDQ 119

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-----RMAWLATQENGEQVEH 172
           L  C  +  I     Y SLNL  AV V +Y +     R+       +  Q++H
Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGLEDEAPDARQIQH 172


>UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudonana
           RepID=B8C4T4_THAPS
          Length = 167

 Score = 81.3 bits (199), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 34/161 (21%)

Query: 28  MGLTNLWLVNP---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84
           MG  +L LV P    V    + I  A+GA DV+ NA    TLD+A+ G ++V GT     
Sbjct: 1   MGFNDLTLVKPHDLKVLHRQKVIQRASGAMDVLTNAQTYSTLDDAVDGFNVVCGTG---- 56

Query: 85  TLPWPM---------LDPREC--GLKSVAEAANTP---------------VALVFGRERV 118
            +P+ M         ++PR    GL S   A N                 +ALVFG E+ 
Sbjct: 57  -MPFDMYQTRLEREYVEPRIYFDGLISNVIANNHSTDDTNDRHQHSNSIRLALVFGSEKT 115

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           G+T  ++  CH  + I  NP++ SLNLA AVQ+IAY+ R+A
Sbjct: 116 GMTESDMDTCHVMLGIPTNPQFGSLNLAAAVQLIAYDWRVA 156


>UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RS14_OSTLU
          Length = 445

 Score = 81.3 bits (199), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 58/224 (25%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN--PLV------------------- 40
           L N+R V+       N+G+ AR M+  G+ +L LV+  P V                   
Sbjct: 62  LSNVRFVMCAPQGPANVGAAARVMQNFGIYDLALVDVGPFVLTTTTRSGDATREISDEAS 121

Query: 41  -----KPD----------------SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGT 79
                 P+                 +A+  A  A  ++ +A   D  +EAL GCS V+ T
Sbjct: 122 EGEGRAPERASEVLGSEARTTPLCEEAMRYACAADWLLADAERCDDAEEALRGCSFVLAT 181

Query: 80  SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAA--- 136
           +AR R+   P++  RE   +   EA    VA++FG ER GLTN+EL   H  VAI     
Sbjct: 182 TARPRS-GTPLMTAREAAERVREEAKRGKVAVLFGNERTGLTNDELSWAHAAVAIPTAGA 240

Query: 137 ------NPEY------SSLNLAMAVQVIAYEVRMAWLATQENGE 168
                 + +Y      +SLNL+ AV ++AYE+ MA      NGE
Sbjct: 241 GKICRKSLKYTGGTGPTSLNLSHAVGILAYEIFMACGGEATNGE 284


>UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus
           RepID=O28473_ARCFU
          Length = 226

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67
           +LVE     N+G +AR  K  G+  L L    V  +S   A  A A DV+ NA +V+ L 
Sbjct: 1   MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTA--ANAKDVLENAVVVEDLQ 58

Query: 68  EALAGCSLVVGTSA----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           E L   +L+VGT+       + L   +L P +  L SVA+     VA++FGRE  GL NE
Sbjct: 59  EFLQRMNLIVGTTGIPGGDYKYLRKELLAPED--LPSVAKGR---VAVLFGREDYGLYNE 113

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL+ CH  V +  + EY  +N++ A  VI Y +R          E+V+ E+       D+
Sbjct: 114 ELEMCHVLVRVPTSEEYPVMNVSHAAAVILYFLR--------EIERVQ-EDDEIATFRDI 164

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELN-ILRGILASIEQQ 239
           E    +L + L    +  E+   + +   RR+  RA   + E   LN I R  ++ I++ 
Sbjct: 165 EVTLSNLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRM 223

Query: 240 NK 241
           N+
Sbjct: 224 NR 225


>UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SV68_PHYPA
          Length = 287

 Score = 80.5 bits (197), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 111/261 (42%), Gaps = 50/261 (19%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L+ +R+VLV   H GN+GSV       G+            ++Q +A    +   + +  
Sbjct: 24  LERVRVVLVSPQHAGNVGSVNPQCDFRGV------------EAQTMAANVTSRSKLEHIR 71

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + DTL EAL  CS+ VG + RS  L  P  D R   L  +    +  +A+VFGRE  GLT
Sbjct: 72  VTDTLPEALKDCSMAVGFTRRSGILRIP--DTRLANL-CIPPLDSLNLAIVFGREDRGLT 128

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP--- 178
           NEEL  C +  +I +     SLNL+ AV V+   +           EQ+ HE+   P   
Sbjct: 129 NEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLY----------EQIPHEQAHDPSNY 178

Query: 179 ------------------LVDDLERFY----GHLEQTLLATGFIRENHPGQVMNKLRRLF 216
                              V++L R +        Q  +A G        +++  +RR+ 
Sbjct: 179 VPIHSTSFKNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRML 238

Query: 217 TRARPESQELNILRGILASIE 237
            R  P  +EL  L G L  +E
Sbjct: 239 LRTGPSLKELGFLHGFLTMVE 259


>UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria
           RepID=B0CFB1_ACAM1
          Length = 243

 Score = 80.1 bits (196), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 2/150 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHIVDT 65
            +LVE+    N+G+ ARA+ TMG T+L LV P    +S+ A  LA G+  V+  A I   
Sbjct: 5   FILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPIYQN 64

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124
           L +AL        T+AR R   +  +  RE   +  A+      VA VFG ER GL   +
Sbjct: 65  LSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLNRHD 124

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
           +  C     I     Y SLNLA AV V ++
Sbjct: 125 IDCCDLITTIPQGNPYPSLNLAQAVMVYSF 154


>UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SGQ3_9BACT
          Length = 240

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 16/237 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ + ++L       N+G +ARAM   G ++L     +      A+  A  ASD++ NA+
Sbjct: 1   MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECGLKSVAEAANT--PVALVFGRERV 118
             +T +E ++   +V+G + RS   P+   + P E     V+E  +T   V L+FG E  
Sbjct: 61  HPETFEELISTSDVVIGFTPRS---PFSTNNLPYEELKDFVSETVSTGLKVGLLFGNEAS 117

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL N+EL  C + V++  + +Y S+NLA AV V  ++++       E  ++ E E     
Sbjct: 118 GLNNKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK-----DIEPDKEAEAEYADRN 172

Query: 179 LVDD-LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
            +   L+R   HLE       +  + +P  +  ++R++    R   +E  ++  +  
Sbjct: 173 TIGTLLQRIKDHLE----LIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFG 225


>UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KEG9_ELUMP
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 13/182 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I I+LV+  +  N+G+ ARAM   GL++L +    + P+ +    A GA D++  A I D
Sbjct: 2   ITIILVKPRNPNNIGASARAMANFGLSDLRIAGAHI-PNLEEAQAAVGAEDLLKKAKIFD 60

Query: 65  TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122
            L +ALA C+     TS ++R     ++      L ++        +A+VFG E+ GL+ 
Sbjct: 61  NLQDALADCNFAFAATSLKNRNTQKEIV-----SLPNINNHIKRGKIAVVFGSEKTGLSV 115

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           ++++ C   + I    +  S+NLA AV ++ YE      A  +N + ++ ++T  P   D
Sbjct: 116 KDIELCDAVLNIPTTTKQPSVNLAQAVNLVCYET-----AKTKNFKTLKQQKTNLPSFKD 170

Query: 183 LE 184
           ++
Sbjct: 171 ID 172


>UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ
          Length = 232

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 37/250 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA--HIVD 64
           +  VE     N+G++AR  K     +L+L+NP V    +A  +A  A D++  A  + ++
Sbjct: 5   VFFVEPEKVDNIGAMARVCKNFN-ADLYLINPKVDNYEKAFVVAKHAQDLLQKAIENKLN 63

Query: 65  TLDEALAGCSLVVGTSA---------RSRTLPWPMLDPRECGLKSVAEAANTPVAL--VF 113
           ++DEA     + VGT+          RS   PW + +            AN+ + L    
Sbjct: 64  SIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAE----------RFANSDIKLGIFI 113

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           GRE +GLTNEEL K  + V I AN EY  LN   A  +I YE+   +  ++E      H 
Sbjct: 114 GRESIGLTNEELSKMDFIVTIPANKEYPILNATHATAIILYEL---FKHSKEG-----HV 165

Query: 174 ETPYPLVDDLERFYGHLEQTL--LATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
               P  + ++    ++++ +  L     R+ +   +M   R+L T+    S+E N L G
Sbjct: 166 NLALPKKEQIDVLLDYVKKIIDKLPQPDYRKEYYFIIM---RKLITQGIINSREANTLIG 222

Query: 232 ILASIEQQNK 241
              SI +  K
Sbjct: 223 FFRSIYENLK 232


>UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum
           acidiphilum ARMAN-2 RepID=C7DGL7_9EURY
          Length = 234

 Score = 77.4 bits (189), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 31/242 (12%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59
           M++NI++  VE  +  N+G  AR +K   +  ++LVNP  K + + AI  +  A D+I N
Sbjct: 1   MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSA---RSR-----TLPWPMLDPRECGLKSVAEAANTPVAL 111
           A I+  L+  +   S VVGT+A   +SR      +  P  +    G KS+       + L
Sbjct: 61  AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRG-KSIEN-----MTL 113

Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----AWLATQENG 167
           + GR+  GL +EEL +C+  V I  +  Y +LN++ A+ ++ Y +      +W   QE G
Sbjct: 114 LIGRDNTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLYALTAQKPSSW--PQEIG 171

Query: 168 EQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227
           E        Y    DL         ++ +  +IR+     V      +  RA P  +E+N
Sbjct: 172 EL-------YADSSDLRMIKSLFGASVDSNPYIRKKE--TVKKAFENMLVRANPTKKEIN 222

Query: 228 IL 229
            L
Sbjct: 223 AL 224


>UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus
           RepID=A9WAF6_CHLAA
          Length = 239

 Score = 76.3 bits (186), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + +I ++L +     N+G+V RAM   G  +L LV+P     +   A+A     V+ N  
Sbjct: 1   MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRT-LPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
           +   L EA+A    +VGTS R    LPW   D R+   ++   AA+T PVA++FG E  G
Sbjct: 61  VHAHLSEAIADIRYLVGTSDRPHPGLPWRN-DVRQWANETRQRAASTGPVAILFGSEGNG 119

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ +EL  C   + +    +Y  LNLA AV ++ YE++             E   T    
Sbjct: 120 LSRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQVTTPLAPPPPPGEPPAT---- 175

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           +   E  Y  +   +  T F++      +  +LR +  RA    ++  +L  +L  +
Sbjct: 176 LAARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREV 232


>UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured
           marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ
          Length = 209

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 96/224 (42%), Gaps = 22/224 (9%)

Query: 25  MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84
           M   G+ +L LV    + D    A +     ++ N    DTL+EALA C + + TS    
Sbjct: 1   MVNFGIDDLALVKG-CEIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIK- 58

Query: 85  TLPWPMLDPREC-GLKSVAEAAN-----TPVALVFGRERVGLTNEELQKCHYHVAIAANP 138
               P  D R     KS+ E  +        AL+FGRE  GL   EL  C   + I  NP
Sbjct: 59  ----PEGDKRWFRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNP 114

Query: 139 EYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLAT 197
           ++  LNL+ AV ++ YE+ R       +  + V +EE         ER    +   L  T
Sbjct: 115 KFPILNLSHAVGIVLYEIYRDGNHKNPKKRKAVSNEE--------FERLVDRIMDLLEET 166

Query: 198 GFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            + R     +    LRRL +R  P+  E   L GI  +I++  +
Sbjct: 167 SYPRRRL-DRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209


>UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8J096_CHLRE
          Length = 324

 Score = 74.3 bits (181), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 22/177 (12%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-----QAIALAAGASD 55
           +L ++R+VLV   H  N+G+VARA       NL++V P     +     +A  +A G S 
Sbjct: 22  LLSDVRVVLVAPKHEANIGAVARAAANFECLNLYIVAPRCDGAAAGWTGEARKVACGDS- 80

Query: 56  VIGNAHIVDTLDEALAGCSLVVG----TSARSRT----------LPW--PMLDPRECGLK 99
           V+  A +VDTL++ALA  S  +G    T A  RT           P+  P+  P      
Sbjct: 81  VLDRAVVVDTLEQALADTSSSIGFTRRTGAARRTHASLGHLLAEFPFALPLQPPPVAVPT 140

Query: 100 SVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           S A A     ALVFGRE  GLT  EL+ C Y  AI       S+NL+ AV  +  E+
Sbjct: 141 SAAAAGPCATALVFGREESGLTEAELRLCSYASAIPTGRVQPSMNLSHAVAAVLAEL 197


>UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola
           RepID=Q73KY3_TREDE
          Length = 251

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 7/159 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHI--- 62
           I+L     + N+G+V R M   G ++L +       D ++ + LA  AS V   A     
Sbjct: 7   IILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYPP 66

Query: 63  -VDTLDEALAGCSLVVGTSARSRTLPWPM-LDPRECGLKSVAEAANTPVALVFGRERVGL 120
            ++ L EA + CS+++GTS R+      + + P +  L  + +     + LVFG ER GL
Sbjct: 67  TIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCL-DLKKFYGGRLGLVFGNERTGL 125

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            +EEL  C + V I A  ++ S NL+ AV ++ Y + +A
Sbjct: 126 IDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIA 164


>UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pelobacter
           carbinolicus DSM 2380 RepID=Q0C6T9_PELCD
          Length = 166

 Score = 73.9 bits (180), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 66/126 (52%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M + IR++LVE    GN+G VARAM   G++ L LVNP      +A   A  A+ ++G A
Sbjct: 5   MSKRIRVILVEPQSPGNIGMVARAMGNFGVSELRLVNPCTYLHPEARKFAVRAAPLLGKA 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +   L  ALA   + V  + R+  L   +LD  +    +    A   V LVFGRE  GL
Sbjct: 65  RVFPDLASALADLPMSVAATRRAGKLRGELLDVADAARLAAGLPAVEGVGLVFGREDAGL 124

Query: 121 TNEELQ 126
           T++E+ 
Sbjct: 125 TSDEVS 130


>UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba
           RepID=B0EAZ5_ENTDI
          Length = 350

 Score = 73.2 bits (178), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 5/150 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLV   H  N+G+V R     G+  L++VNPL K   ++I ++   +  I  A I +
Sbjct: 97  ISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVICN 156

Query: 65  TLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +L+E    C+L+VG +AR    +     ++  +E G   +       + LVFG E  GL 
Sbjct: 157 SLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAG--DMLSTMKGCLGLVFGNESNGLN 214

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQV 151
            EE   C     I     Y  LNL+ AV +
Sbjct: 215 TEECDACDLLNKIDIRSHYPVLNLSHAVGI 244


>UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri
           RepID=Q01FK7_OSTTA
          Length = 384

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 60/215 (27%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLV----NPLVKPDS------------- 44
           L+N+R VL       N+G+ ARAM+  G+  L L     N L + D+             
Sbjct: 55  LENVRFVLCAPQGAANVGACARAMQNFGVYELKLCEVGPNVLERDDAGETAATRGTESDA 114

Query: 45  ---------------------------QAIALAAGASDVIGNAHIVDTLDEALAGCSLVV 77
                                      +A+  A  A  ++ +A     ++ ALAGC+ V+
Sbjct: 115 ERILDEASEGEGKTPERAANQTLPLSAEALRYACAADWMLEDAERCADVEAALAGCTFVL 174

Query: 78  GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL------------ 125
            T+AR RT   P++  RE   K   EA    VA++FG ER GLTNEEL            
Sbjct: 175 ATTARPRT-GTPLMTAREAAKKVAEEAKRGKVAVLFGNERTGLTNEELAWASAAVVVPTA 233

Query: 126 ---QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
              + C   +        +SLNL+ AV +IA+ ++
Sbjct: 234 GAGKLCRKSLKYTGATGPTSLNLSHAVGIIAHRMK 268


>UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MHK3_BDEBA
          Length = 261

 Score = 67.0 bits (162), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 16/241 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IRIVLV T +  N+G+ +RAM  MG+  L L++P  +   +A   AA     + N     
Sbjct: 7   IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-------NTP--VALVFGR 115
           + DE +      +  +  +R      +   +  LK +A+ A       + P  V LVFG 
Sbjct: 67  SWDEFMKQEPESIKVAFTARDGKGRQVRDVDEVLKDIADKAPQFQVESDVPYVVHLVFGP 126

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEHE 173
           E  GL  E+L+  ++   I    +  SLNLA A  +  Y +R  W    T+ +G +V   
Sbjct: 127 EDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRRA 186

Query: 174 ETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
                 +D        LE+     GF +       V   LRR+  +  P  +EL IL  +
Sbjct: 187 PQGIDGIDPEATLKTWLEE----MGFDLTRQRKINVFTVLRRMLLQNTPTKKELVILETV 242

Query: 233 L 233
           L
Sbjct: 243 L 243


>UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H8_9CHLO
          Length = 467

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 44/198 (22%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP----LVKP--------------- 42
           L N+  VL       N+G +AR M+  G+T+L +V P    L  P               
Sbjct: 75  LDNVCFVLCRPQGPQNIGGIARVMQNFGVTDLRIVAPEPGALAPPFDAADEYDRAIHPPE 134

Query: 43  -------DSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE 95
                    +A   A  A  ++ +A    T DEALA  + V  T+AR R     + D R 
Sbjct: 135 VRARAPLSDEAHKFAVHADWLLRDARRCATADEALADVAFVAATTARPRE-NLSIADVRA 193

Query: 96  CGLKSVAEAAN-TPVALVFGRERVGLTNEELQKCHYHVAI----------AANPEY---- 140
                   AAN T VA+VFG E  GLTN+EL + +  V I          ++   Y    
Sbjct: 194 ASEVLRRHAANGTKVAVVFGNEATGLTNDELARANLGVMIATSAATSSPASSRKRYTGAK 253

Query: 141 --SSLNLAMAVQVIAYEV 156
             +SLNL+MAV V+AYE+
Sbjct: 254 GATSLNLSMAVGVVAYEL 271


>UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FIG4_9CHLO
          Length = 506

 Score = 63.2 bits (152), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 37  NPLVKPDSQAIALA------AGASD-VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWP 89
           NP   P S A  L       A A+D ++ +A   DT  EA++ C+ V+ T+AR R    P
Sbjct: 169 NPADDPASPAPPLCDEAYRFACAADWLLADAKRCDTALEAISDCTFVMATTARPRGN-VP 227

Query: 90  MLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAI--------------- 134
           ++  R        EA    VA++FG ER GLTNEEL + H  VAI               
Sbjct: 228 LVTARVAAEMLAKEAKRGKVAVLFGNERTGLTNEELAQAHACVAIPTAGQGTLCRRSLKY 287

Query: 135 AANPEYSSLNLAMAVQVIAYEVRMA 159
                 +SLNL+ AV V+AYE+ MA
Sbjct: 288 TGGTGPTSLNLSQAVGVLAYEMFMA 312


>UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Endoriftia
           persephone 'Hot96_1+Hot96_2' RepID=UPI0001699FF1
          Length = 92

 Score = 57.4 bits (137), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 150 QVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM 209
           Q++AYEV   +LA+ E  ++           + LE F+ HL Q L   GF       +++
Sbjct: 1   QLLAYEV---YLASLEEADKPLRAPREVASAEMLEGFHTHLAQALEDIGFADPRQSDKLL 57

Query: 210 NKLRRLFTRARPESQELNILRGILASIE 237
            +LR LF RARP+  E+NILRGIL++ +
Sbjct: 58  RRLRALFHRARPDRDEINILRGILSAAQ 85


>UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class)
           RepID=A9WFI1_CHLAA
          Length = 261

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 67/158 (42%), Gaps = 28/158 (17%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA--SDVIGNAHIV 63
           +VLVE +  GN+G++ R     G + + LV     P D  A+  + GA  S  I      
Sbjct: 118 VVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIARTSWP 177

Query: 64  DTLDEA------LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
           D L  A      L G S    +  R+ T P P+L                   LV G ER
Sbjct: 178 DLLTWARQHRIALVGSSDRGASDYRATTYPRPLL-------------------LVLGSER 218

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
            GLT+E+L  C   V I       SLNLA+A  ++ YE
Sbjct: 219 HGLTDEQLAACDLVVRIPMRGRSDSLNLAVAAGILMYE 256


>UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcus
           RepID=A4S331_OSTLU
          Length = 344

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 59/125 (47%), Gaps = 25/125 (20%)

Query: 68  EALAGCSLVVGTSARSR-TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
           EA+A  SLVV T+AR R  LP   L    C       A     A++FG ER GLTNEEL+
Sbjct: 79  EAVAEASLVVATTARPRENLPLLTLGA-ACEKMRDEIARGGKCAILFGNERTGLTNEELE 137

Query: 127 KCHYHVAI-----------AANPEYS------------SLNLAMAVQVIAYEVRMAWLAT 163
              + V+I           A   +YS            SLNL MAV V+AYE+     A 
Sbjct: 138 LAEFGVSIPTSATVGTSAMARRNKYSGGAGVDGSQTATSLNLGMAVGVVAYELFSQVHAV 197

Query: 164 QENGE 168
           +E+ E
Sbjct: 198 REDDE 202


>UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME
          Length = 297

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 23/171 (13%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGNA 60
           ++ + L      GN+G+V R    +G   + L+     P S     A   S     +  A
Sbjct: 143 DVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYRA 202

Query: 61  HIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
              D L+       LVVGT  +     RT+P+                AN PV L+ G E
Sbjct: 203 SEADFLNWRKGFSGLVVGTHLKGAVDYRTIPY----------------ANKPVILIMGNE 246

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
           + GL +     C     I       SLNLA+A  V+ YE+R   L   E G
Sbjct: 247 QQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297


>UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N9R5_9CHLO
          Length = 447

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60
           L ++ +VLV T   GN+G++ARA       +L LV P   P ++A ++ A GA  ++  A
Sbjct: 138 LSDVAVVLVGTKKAGNVGAIARACGAFECEDLRLVAPRADPYTRASLSAAKGAQHIVHGA 197

Query: 61  HIVDTLDEALAGCSLVV 77
            + D +++AL GC   +
Sbjct: 198 GVYDDVEDALRGCDAAI 214


>UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria RepID=C3RH76_9MOLU
          Length = 246

 Score = 50.1 bits (118), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 17/148 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           +VLV     GNMG++ R M     TNL ++ P V   D + I  + GA   I N    ++
Sbjct: 96  VVLVNPGDMGNMGTIIRTMLGFNYTNLAIIRPGVDVFDPRVIRASMGALFNI-NFEYFNS 154

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123
            DE L        T    R +   ML     G K++ +  AAN   +LVFG E  GL ++
Sbjct: 155 FDEYL--------TKYPEREVYPLMLK----GAKNIHQITAANNKHSLVFGNESSGLPDD 202

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQV 151
            L K    V I  + +  SLNL+MA+ +
Sbjct: 203 YL-KYGQSVFIPHSDKIDSLNLSMALGI 229


>UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N4L1_9CHLO
          Length = 513

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 15/66 (22%)

Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYS---------------SLNLAMAVQVIA 153
           VA++FG ER GLTNEEL   H  VAI    + S               SLNL+ AV VIA
Sbjct: 227 VAVLFGNERTGLTNEELGTAHAAVAIPTAGQGSLCRKSLKYTGGTGPTSLNLSQAVGVIA 286

Query: 154 YEVRMA 159
           YE+ +A
Sbjct: 287 YEMFLA 292


>UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF
          Length = 272

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 15/161 (9%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63
           V VET   GN G++ R    +G   +      V P    +  A+  S     V  N +I 
Sbjct: 122 VPVETREPGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNID 181

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L +  +    ++ T+A             E  L    E  + P A +FG E  GL  E
Sbjct: 182 DVLGQLRSQGLQILATAADG-----------EVDLDDAGELLSRPTAWLFGNEAHGLGEE 230

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164
            L K  + V I       SLNLA A  +  YE   A  A +
Sbjct: 231 LLAKADHRVRIPIRGRAESLNLATAASICLYESSKALFADE 271


>UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3
          Length = 274

 Score = 46.6 bits (109), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 20/163 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VL      GN+G++ R     G+  +WL    V P S  +  ++  S ++     + +L
Sbjct: 123 LVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQLQSL 182

Query: 67  DEAL-----AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              L      G  L+      ++TL W +   R             P  ++FG E  GL+
Sbjct: 183 PPLLEKFHTQGLQLIATVPQATQTL-WEIDFQR-------------PTIVIFGSEGQGLS 228

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLAT 163
              L+   + VAI   P+  SLN+A+AV V+ YE  R  W A+
Sbjct: 229 APVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAAS 271


>UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ED00_9CHLO
          Length = 369

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNA 60
           L+++ +V+V +   GN+G++ARA  +    +L LV P V P S+ +++ A GA  V+  A
Sbjct: 80  LEDVCVVVVGSKKAGNIGAIARAAASFECEDLRLVAPRVDPTSRSSLSSAKGAQHVVHGA 139

Query: 61  HIVDTLDEALAGCSLVV 77
               ++ EA+A C   V
Sbjct: 140 GEYLSVAEAIADCDAAV 156


>UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimonas micra ATCC
           33270 RepID=A8SJQ1_9FIRM
          Length = 261

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 23/156 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           I L   S  GN G++ R     G+ ++  +N + K +S+ +    GA   I   +I+D  
Sbjct: 120 ICLENVSDPGNFGTIIRTANAFGINDILTINCVDKYNSKVLRATMGA---IFRTNIIDCK 176

Query: 67  DEAL-----AGCSLVVGT-SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            E +      G  L+  T S  S+ L     D +                +V G E  G+
Sbjct: 177 IEKIKELQSGGYRLISTTLSKNSKFLEEFTFDGKN--------------IVVMGNEANGI 222

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           + E L+  + H+ I  +    SLN+++A  +I Y++
Sbjct: 223 SAEMLKISNNHLKIDMDNSMESLNVSIAAAIIMYKI 258


>UniRef50_Q1VZT2 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755
           RepID=Q1VZT2_9FLAO
          Length = 171

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 28/163 (17%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLW--------LVNPLVKPDSQAIALAAGASDV 56
           I ++L       N+GSV R  +  G+ N+W        L +  +K  S++          
Sbjct: 23  INVLLERLDSPANLGSVFRNSEAFGIVNIWIHEANRSYLKSNRLKRTSRSAEFNLNIHFY 82

Query: 57  IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
              A I+DT +    G  +   +           L   + GLKS        + LV G E
Sbjct: 83  EDEASILDTFEGTTIGIEITKNSEN---------LSSFKKGLKS-------KILLVLGNE 126

Query: 117 RVGLTNEELQKCH--YHVAIAANPEYSSLNLAMAVQVIAYEVR 157
           ++G+ +E L +    YH+ +      SSLN+A  + +  YE+R
Sbjct: 127 KLGINSETLNRLDRSYHIKMFGTN--SSLNVAQTLGIALYEIR 167


>UniRef50_C6T8X9 Putative uncharacterized protein n=2 Tax=rosids RepID=C6T8X9_SOYBN
          Length = 324

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 11/153 (7%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASD----VIGNAH 61
           +VL      GN+G++ R+        ++L+     P + +A+  + GAS     V G+ +
Sbjct: 171 LVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPVVSGSWN 230

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            +++L +      L           P   L P  C        ++TP+ LV G E  GL+
Sbjct: 231 HLESLKKEFQMRFLAGHPEHEGLVKPVSSLSPSFCD-----SLSDTPLCLVLGSEGSGLS 285

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
            + LQ C   V+IA   EY SLN+++A  +  Y
Sbjct: 286 EKSLQTCEL-VSIAMTGEYESLNVSVAGGIFLY 317


>UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID=C5EXS0_9HELI
          Length = 228

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 22/147 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV--- 63
           +VL   S  GN+GS+ R+   +G+  + +    +K   Q   L A +  ++G    V   
Sbjct: 86  LVLCGISDVGNLGSIFRSAYALGVDGIVVCG--IKDFKQEGVLRASSGAMLGMPFCVVHN 143

Query: 64  --DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             D ++E       + GTS + + L                 A +   AL  G E  GL+
Sbjct: 144 PLDVINELKQSDFTLFGTSMQGKDLQ---------------NALSGKKALFLGSEGHGLS 188

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMA 148
           N+ L K  Y++ I    E+ SLN+ +A
Sbjct: 189 NKILAKMDYNLTIPMKREFDSLNVGVA 215


>UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes
           RepID=A3DH38_CLOTH
          Length = 277

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 29/161 (18%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA------ 60
           I+L   +   N+GS+ R    +G       + +V P  +AI L A  S     A      
Sbjct: 131 IILDGITDAYNLGSILRTADAVG------AHGVVIPKRRAIGLNAAVSKASAGAIEYVPV 184

Query: 61  ----HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
               +I  T++        +VGT         P     E  LK        PVALV G E
Sbjct: 185 ARVTNISQTIEYLKKKNIWIVGTDLSGEK---PFF---EADLKG-------PVALVIGSE 231

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
             G+     +KC + V I    + SSLN A+A  +I YE+R
Sbjct: 232 GEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIR 272


>UniRef50_B8DQP1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfovibrio vulgaris
           str. 'Miyazaki F' RepID=B8DQP1_DESVM
          Length = 344

 Score = 42.4 bits (98), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 13/153 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-------SDVIGN 59
           + L +    GN+G++AR +  +G   L +V         A A AA         + V   
Sbjct: 187 VALDQVQDPGNVGTLARTLYALGAAGLVVVRHGGAALGGAAARAAAGALEKLPVAKVTNL 246

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           A  +D  DEA  G ++     A   T   P   PR        E   TP  LV G E  G
Sbjct: 247 ARALDEADEA--GYTIYAAGGAAPETDGKPGSGPR----NPFTEPLRTPAVLVLGNEDSG 300

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVI 152
           +     ++CH+ ++I    ++ SLN+A A  ++
Sbjct: 301 IRPNVAKRCHFTLSIPMARDFDSLNVAQAGAIL 333


>UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86
           Tax=Bacteria RepID=YACO_BACSU
          Length = 249

 Score = 41.6 bits (96), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 29/164 (17%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIAL-------AAGASD 55
           Q   ++L E     N+GS+ R    +G       + +V P  +A+ L       + GA +
Sbjct: 96  QPFFLILDELEDPHNLGSIMRTADAVG------AHGIVIPKRRAVGLTTTVAKASTGAIE 149

Query: 56  VIGNAHIVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALV 112
            I  A + +   TL+E       VVGT A +R       D R           N P+ALV
Sbjct: 150 HIPVARVTNLARTLEEMKERGIWVVGTDASARE------DFRNMD-------GNMPLALV 196

Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            G E  G+     +KC + + +    + +SLN ++A  ++ YEV
Sbjct: 197 IGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEV 240


>UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamicum
           RepID=Q8NQN8_CORGL
          Length = 198

 Score = 41.6 bits (96), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 15/161 (9%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA---SDVIGNAHIV 63
           V VET   GN G++ R    +G   +      V P  ++A+  +AG+     V  N +I 
Sbjct: 49  VPVETREPGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIA 108

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L +  +    ++ TSA             E  L    E    P A +FG E  GL   
Sbjct: 109 DVLGQLRSKGLQILATSADG-----------EVDLDDADELLAKPTAWLFGNEAHGLDES 157

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164
            L +  + V I       SLNLA A  +  YE   A  A +
Sbjct: 158 LLAQADHRVRIPIRGRAESLNLATAASICLYESSKALFAGE 198


>UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes
           RepID=B0K5F8_THEPX
          Length = 247

 Score = 41.6 bits (96), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 31/161 (19%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           ++L E +   N+G++ R+ +  G      V+ ++ P  +A+ +         NA +V T 
Sbjct: 99  LILDEITDPHNLGAIIRSAEAFG------VHGIIIPKRRAVGV---------NATVVKTS 143

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-----------PVALVFGR 115
             A+    +     A+   +   + D +E GL  V    N            PVA V G 
Sbjct: 144 AGAVEHMRI-----AKVSNINNTIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGN 198

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           E  G++   LQ C + V I    + +SLN ++A  ++ Y+V
Sbjct: 199 EGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQV 239


>UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6P2D0_9BACE
          Length = 252

 Score = 41.2 bits (95), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI-VD 64
           +VL      GN+G++ R     G   L LVN    P S + I    GA   +      ++
Sbjct: 111 LVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWETDLE 170

Query: 65  TLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           T+   L G  + +  T+ R  T+     D R+  LK  A        +V G E  G+++E
Sbjct: 171 TVRALLDGADIPLYATALREDTV-----DVRDVDLKRAA--------VVIGSEGRGISDE 217

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            L  C   + I       SLN AMA  V+ +E+
Sbjct: 218 ALALCRRTIKIPMRARCESLNAAMAAGVVLWEM 250


>UniRef50_A3XMS0 Putative tRNA/rRNA methyltransferase n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XMS0_9FLAO
          Length = 175

 Score = 41.2 bits (95), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 16  GNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVI----GNAHIVDTLDEALA 71
            N GS+ R    +G+ +++  N  ++ +S  +   A +S+ +     +A ++ TL+    
Sbjct: 33  ANAGSLFRLADALGIAHIYFCNTTIQFESTRLKRTARSSEKLVPYSPDADVITTLNGLKE 92

Query: 72  GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYH 131
               ++G    + + P          L S+ E A   +ALV G ER G+  + L    + 
Sbjct: 93  KDYHLIGLELTTTSKP----------LASLNEYAFKKIALVLGHERYGICEDVLNILDHI 142

Query: 132 VAIAANPEYSSLNLAMAVQVIAYEV 156
             I    + SS+N++ A  + AY++
Sbjct: 143 TYIPMRGKNSSMNVSQAAAIAAYQL 167


>UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes
           RepID=Q724H1_LISMF
          Length = 251

 Score = 40.8 bits (94), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASD---VIGNAHI 62
           I+L E     N+GS+ R   ++G   + +        +Q +A A+ GA +   V+   ++
Sbjct: 102 IILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNM 161

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V T++E       + GT A+  +  +  +D             + P+A+V G E  G++ 
Sbjct: 162 VRTMEELQKRGLWIFGTDAKGSS-DYRTMD------------VDMPLAIVIGSEGFGMSC 208

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
              +KC + V +    + +SLN ++A  ++ YEV
Sbjct: 209 LVREKCDFLVHLPMRGKVTSLNASVAASLLLYEV 242


>UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 Tax=Corynebacterium
           amycolatum SK46 RepID=UPI000185C1B1
          Length = 276

 Score = 40.4 bits (93), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 34/162 (20%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           ++ VE +  GN+G++ R    +G   + L    V P +S+A+  +AG             
Sbjct: 131 VIPVECNDPGNVGTIVRMTDALGAGAVILAGDSVDPLNSKAVRSSAG------------- 177

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA------------ANTPVALVF 113
                   S+     AR R +   +   RE G  ++A A             + PVA +F
Sbjct: 178 --------SVFHTPVARERDIDVVVERVREAGFTTLATAMDGALTLGVDALPDGPVAWLF 229

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           G E  GL+ E        VAI    E  SLNLA A  +  +E
Sbjct: 230 GNEAHGLSEEITASAGASVAIPIKGEAESLNLATAAAMCLWE 271


>UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9AZL1_HERA2
          Length = 266

 Score = 40.0 bits (92), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 26/149 (17%)

Query: 16  GNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSL 75
           GN+G++ R    +G   L L+     P   A A+ A    +     +  T DE  A    
Sbjct: 129 GNLGAIMRTCDAVGCEGLILIGDTTDPYHPA-AIRASMGSLFALRMVRTTFDEFAAWKQT 187

Query: 76  ----VVGTSA----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
               V+GT+       +T+ +P                 +P  L+ G ER+GL+  E   
Sbjct: 188 NGYHVIGTTPDVEQEYQTISYP-----------------SPAILLMGSERLGLSVGEQSV 230

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           C   V I       SLNL +A  ++ YE+
Sbjct: 231 CDTLVRIPMAGTCDSLNLGVATSIVLYEM 259


>UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae
           RepID=B1ZWW3_OPITP
          Length = 250

 Score = 40.0 bits (92), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 18/155 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLV-NPLV-KPDSQAIALAAGASDVIGNAHIVD 64
           +VL    +  N+G++AR     GL  L L  +P   +P   A  +A G    +  A + D
Sbjct: 100 LVLDRIGNAHNLGAIARTAAFFGLPRLILPRDPAAAQPSEAAYRVAEGGMTHLELARVDD 159

Query: 65  T---LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
               L   +A    V+G + R              GL         P+ALV G E  GL+
Sbjct: 160 LPAFLRSLVAAGYDVIGAATRG-------------GLPQAQSHTGKPIALVLGNEEHGLS 206

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            E    C   V I  + +  SLN+++A  V+ +E+
Sbjct: 207 AEVAAACTRLVTIPGSGKVESLNVSVAGAVLIWEL 241


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   379   e-104
UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   347   2e-94
UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   343   3e-93
UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil...   342   6e-93
UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ...   335   7e-91
UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ...   335   7e-91
UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter...   317   2e-85
UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ...   311   1e-83
UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ...   310   2e-83
UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G...   308   7e-83
UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ...   307   2e-82
UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ...   305   1e-81
UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ...   299   4e-80
UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella...   297   3e-79
UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro...   297   3e-79
UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03...   294   2e-78
UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick...   293   3e-78
UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro...   293   4e-78
UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ...   290   3e-77
UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith...   289   6e-77
UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac...   288   1e-76
UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ...   287   2e-76
UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami...   287   3e-76
UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ...   285   9e-76
UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI...   284   2e-75
UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ...   284   2e-75
UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ...   283   3e-75
UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ...   283   5e-75
UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ...   281   1e-74
UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30...   280   2e-74
UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34...   278   9e-74
UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ...   278   1e-73
UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM...   278   1e-73
UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte...   277   2e-73
UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ...   274   2e-72
UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a...   272   8e-72
UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ...   272   8e-72
UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ...   272   1e-71
UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ...   271   1e-71
UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ...   270   4e-71
UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ...   269   5e-71
UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp...   269   6e-71
UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68...   268   8e-71
UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur...   268   1e-70
UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ...   268   2e-70
UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ...   265   9e-70
UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur...   265   1e-69
UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma...   264   2e-69
UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ...   262   9e-69
UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo...   261   2e-68
UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re...   259   6e-68
UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ...   259   7e-68
UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25...   258   9e-68
UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera...   258   1e-67
UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or...   258   2e-67
UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ...   257   3e-67
UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ...   256   5e-67
UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales...   256   5e-67
UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ...   256   7e-67
UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re...   255   7e-67
UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N...   255   9e-67
UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ...   255   1e-66
UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo...   254   2e-66
UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s...   254   2e-66
UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ...   253   3e-66
UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod...   253   5e-66
UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11...   252   8e-66
UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ...   251   1e-65
UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ...   251   1e-65
UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria...   251   2e-65
UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq...   250   2e-65
UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ...   250   3e-65
UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ...   250   3e-65
UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ...   249   5e-65
UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad...   248   1e-64
UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group...   247   2e-64
UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph...   246   3e-64
UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur...   246   5e-64
UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ...   246   5e-64
UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   245   2e-63
UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne...   244   2e-63
UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein...   244   2e-63
UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc...   243   3e-63
UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L...   243   4e-63
UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   243   5e-63
UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ...   242   7e-63
UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma...   239   7e-62
UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula...   238   2e-61
UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne...   236   3e-61
UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob...   232   7e-60
UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ...   231   1e-59
UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo...   231   2e-59
UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ...   231   2e-59
UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ...   230   2e-59
UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or...   229   5e-59
UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc...   229   6e-59
UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   229   7e-59
UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc...   229   8e-59
UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14...   228   1e-58
UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7...   227   2e-58
UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ...   226   5e-58
UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ...   226   7e-58
UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha...   225   1e-57
UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ...   225   1e-57
UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ...   225   1e-57
UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho...   225   2e-57
UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ...   224   2e-57
UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc...   223   4e-57
UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar...   222   9e-57
UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep...   221   2e-56
UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra...   221   2e-56
UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo...   220   4e-56
UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe...   219   9e-56
UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido...   218   1e-55
UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402...   216   5e-55
UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte...   212   1e-53
UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat...   211   1e-53
UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ...   211   1e-53
UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido...   211   2e-53
UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto...   210   4e-53
UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ...   209   6e-53
UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=...   209   9e-53
UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI...   205   1e-51
UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM...   204   2e-51
UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto...   203   4e-51
UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ...   201   1e-50
UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT...   201   2e-50
UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo...   201   2e-50
UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12...   200   4e-50
UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ...   199   9e-50
UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer...   197   2e-49
UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10...   196   4e-49
UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor...   196   4e-49
UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ...   195   1e-48
UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS...   195   1e-48
UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi...   194   2e-48
UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT...   194   3e-48
UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot...   193   6e-48
UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus...   193   7e-48
UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta...   189   8e-47
UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ...   188   2e-46
UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon...   188   2e-46
UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc...   187   2e-46
UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter...   187   3e-46
UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD...   185   9e-46
UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ...   183   6e-45
UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam...   183   6e-45
UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro...   182   1e-44
UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ...   182   1e-44
UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...   179   9e-44
UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe...   178   1e-43
UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...   175   1e-42
UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ...   175   1e-42
UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano...   175   1e-42
UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo...   172   8e-42
UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell...   169   5e-41
UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarin...   165   1e-39
UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic...   165   1e-39
UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomon...   157   2e-37
UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr...   156   5e-37
UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pe...   156   7e-37
UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H...   153   4e-36
UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ost...   146   5e-34
UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcu...   138   2e-31
UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ...   133   4e-30
UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudona...   124   3e-27
UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor...   111   2e-23
UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria Rep...   109   9e-23
UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales...   107   5e-22
UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8...   101   2e-20
UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCM...    96   1e-18
UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1...    88   3e-16
UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 ...    86   1e-15
UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group...    86   1e-15
UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCM...    85   2e-15

Sequences not found previously or not previously below threshold:

UniRef50_A4RVJ3 Predicted protein n=2 Tax=Ostreococcus RepID=A4R...   101   2e-20
UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamic...    95   2e-18
UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph...    94   4e-18
UniRef50_C9RBF8 RNA methyltransferase, TrmH family, group 2 n=9 ...    93   9e-18
UniRef50_Q1QBK2 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Prote...    93   1e-17
UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero...    92   2e-17
UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu...    91   3e-17
UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe...    91   3e-17
UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces...    89   1e-16
UniRef50_C6XJZ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc...    86   1e-15
UniRef50_A3DBN9 RNA methyltransferase, TrmH family, group 2 n=9 ...    85   2e-15
UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hypho...    84   4e-15
UniRef50_D2RKI7 tRNA/rRNA methyltransferase (SpoU) n=10 Tax=Bact...    84   4e-15
UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot...    84   6e-15
UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ...    83   6e-15
UniRef50_Q2Y7V6 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Betap...    83   7e-15
UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavo...    83   8e-15
UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_L...    82   1e-14
UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 T...    82   1e-14
UniRef50_B8CX36 RNA methyltransferase, TrmH family, group 2 n=20...    82   2e-14
UniRef50_C7N513 Predicted rRNA methylase SpoU family n=1 Tax=Sla...    82   2e-14
UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu...    82   2e-14
UniRef50_A7BD02 Putative uncharacterized protein n=1 Tax=Actinom...    81   3e-14
UniRef50_C6X216 Putative rRNA methylase n=1 Tax=Flavobacteriacea...    81   3e-14
UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hypho...    81   3e-14
UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2...    80   6e-14
UniRef50_C7R3Q5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Jones...    80   7e-14
UniRef50_C7HXS5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thiom...    80   7e-14
UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto...    80   7e-14
UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm...    80   8e-14
UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ...    80   8e-14
UniRef50_B2A6C6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost...    80   8e-14
UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...    80   8e-14
UniRef50_B3E096 tRNA (Cytosine34-2'-O-)-methyltransferase, SpoU ...    79   9e-14
UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ...    79   1e-13
UniRef50_A8SKI8 Putative uncharacterized protein n=1 Tax=Parvimo...    79   1e-13
UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac...    79   1e-13
UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neiss...    79   1e-13
UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=...    79   1e-13
UniRef50_A9NFI2 RNA methyltransferase, TrmH family n=1 Tax=Achol...    79   1e-13
UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu...    79   2e-13
UniRef50_C8W249 RNA methyltransferase, TrmH family, group 2 n=2 ...    79   2e-13
UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...    79   2e-13
UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14...    78   2e-13
UniRef50_B0SDE0 rRNA methylase n=2 Tax=Leptospira biflexa serova...    78   2e-13
UniRef50_C4ZI93 RNA methyltransferase, TrmH family, group 2 n=7 ...    78   2e-13
UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus ...    78   2e-13
UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase...    78   3e-13
UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Acti...    78   3e-13
UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul...    77   3e-13
UniRef50_B0TZX6 rRNA methyltransferase n=3 Tax=Francisella RepID...    77   3e-13
UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35...    77   4e-13
UniRef50_A4SYT6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Polyn...    77   4e-13
UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacte...    77   4e-13
UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevu...    77   4e-13
UniRef50_B2SHA4 rRNA methyltransferase n=17 Tax=Bacteria RepID=B...    77   5e-13
UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (c...    77   6e-13
UniRef50_Q0IAI9 Predicted rRNA methylase n=25 Tax=Cyanobacteria ...    77   7e-13
UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ...    77   7e-13
UniRef50_A9M3B4 tRNA/rRNA methyltransferase n=58 Tax=Proteobacte...    76   7e-13
UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fuso...    76   7e-13
UniRef50_C2BWX1 TrmH family rRNA methyltransferase n=3 Tax=Mobil...    76   8e-13
UniRef50_C0YVQ1 Possible TrmH family rRNA methyltransferase n=1 ...    76   9e-13
UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0...    76   9e-13
UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac...    76   1e-12
UniRef50_Q2RHA9 RNA methyltransferase TrmH, group 2 n=2 Tax=Bact...    76   1e-12
UniRef50_C6P4R4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sider...    76   1e-12
UniRef50_C7RTK9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...    76   1e-12
UniRef50_Q4DUL2 Putative uncharacterized protein n=2 Tax=Trypano...    76   1e-12
UniRef50_D1YDL1 RNA methyltransferase, TrmH family n=2 Tax=Propi...    76   1e-12
UniRef50_Q9SUL3 OBP33pep like protein n=16 Tax=Viridiplantae Rep...    76   1e-12
UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacte...    76   1e-12
UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2...    76   1e-12
UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synec...    76   1e-12
UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema...    76   1e-12

>UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189
           Tax=Proteobacteria RepID=TRMJ_ECOL5
          Length = 246

 Score =  379 bits (975), Expect = e-104,   Method: Composition-based stats.
 Identities = 245/246 (99%), Positives = 246/246 (100%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA
Sbjct: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL
Sbjct: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV
Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN
Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240

Query: 241 KGNKAE 246
           KGNKAE
Sbjct: 241 KGNKAE 246


>UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57
           Tax=Gammaproteobacteria RepID=TRMJ_YERPA
          Length = 257

 Score =  347 bits (890), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A
Sbjct: 1   MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S  EA + PVALVFGRERVGL
Sbjct: 61  TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV-EHEETPYPL 179
           TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L  Q+    V E EE PYPL
Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           VDDLERFY HLEQ L  +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q
Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240

Query: 240 NK 241
           +K
Sbjct: 241 DK 242


>UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70
           Tax=Gammaproteobacteria RepID=TRMJ_PHOLL
          Length = 241

 Score =  343 bits (880), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 178/241 (73%), Positives = 210/241 (87%), Gaps = 1/241 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A
Sbjct: 1   MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A +  VA+VFGRERVGL
Sbjct: 61  TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYH+ I  NPEY SLNLAMAVQ+++YE+RMA+LA Q+  EQ + +E  YPL 
Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DD+ERFY HLE  L  +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+  
Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239

Query: 241 K 241
           K
Sbjct: 240 K 240


>UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2
           Tax=Alteromonadales RepID=Q3IFI1_PSEHT
          Length = 241

 Score =  342 bits (878), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 2/238 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P  + DS A ALAAGASDV+GNA
Sbjct: 2   ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE  GL
Sbjct: 62  VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L  Q   +  E ++T YP  
Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
              E FYGHLE+TL  TGFI + HPG VM KLRR+F RARPE  E+NILRGIL SI +
Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINK 237


>UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Gammaproteobacteria RepID=Q080P3_SHEFN
          Length = 240

 Score =  335 bits (860), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 158/240 (65%), Positives = 186/240 (77%), Gaps = 4/240 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L  P  +PD Q+IALAAGASD++ N 
Sbjct: 1   MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK   E+ N PVA+VFGRE  GL
Sbjct: 61  TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA  E     +     YPL 
Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTD----EYPLT 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +LERF+ HLE TL  TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++ 
Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKKM 236


>UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8
           Tax=Gammaproteobacteria RepID=B3PDK4_CELJU
          Length = 286

 Score =  335 bits (860), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 137/239 (57%), Positives = 165/239 (69%), Gaps = 1/239 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
             NIRIVLV TSH GN+G  ARAMK MGL  L+LV P   P  +A+  AAGA+DV+ NA 
Sbjct: 9   FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG    AEA    VA+VFGRE  GLT
Sbjct: 69  VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE-HEETPYPLV 180
           NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L   E       H + P    
Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             LE +Y HLEQ L+  GF+  ++P Q M +LRRL+ R R +  ELNILRG+L +++  
Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQNY 247


>UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria
           RepID=Q5ZUP6_LEGPH
          Length = 257

 Score =  317 bits (813), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 123/245 (50%), Positives = 166/245 (67%), Gaps = 3/245 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP   PD +A  +AAGA DV+  A 
Sbjct: 3   LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + +TLDEAL GC L++GTSAR R L  P L P  C      ++ NT VA+VFGRE  GLT
Sbjct: 63  VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM  L+      QV          D
Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           ++E+FY HL++  +   F++ ++P ++M ++RRLF R   E  E++ILRG+L+ +++  +
Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239

Query: 242 GNKAE 246
             + +
Sbjct: 240 WARKD 244


>UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga
           thiooxidans DMS010 RepID=C0N7P7_9GAMM
          Length = 253

 Score =  311 bits (797), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++  A 
Sbjct: 15  MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + D+LDEAL GC      SAR R LP P+++PR+   +      NT +A+VFGRE  GL+
Sbjct: 75  VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++    + G   E  E      D
Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQREAI--TND 192

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           DL   Y H E++L   GF+   +P  +M +++RLF RA  +  EL+I+ GIL + E + K
Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252


>UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7
           Tax=Gammaproteobacteria RepID=A6VX19_MARMS
          Length = 260

 Score =  310 bits (795), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 4/241 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P   P  +A + AAGA D++ NA
Sbjct: 1   MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IV TL+EA+A CSLV+GTSAR RT   P+++ REC    + EA +  VA+VFGRE  GL
Sbjct: 61  TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N+E+ +CH  V I AN EY  LN++ AVQ++ YE+ MA     +N E  + E   YP  
Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEIWMA----NQNKENYKKETPEYPHK 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            D++ FY HLE+TL    FI  +HPG+V++KL R F R+RPE QEL ILRG+LA+++++ 
Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQREA 236

Query: 241 K 241
            
Sbjct: 237 G 237


>UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT
          Length = 249

 Score =  308 bits (791), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 3/242 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  ++IVLV T+H GN+G+ ARAMK MG   L LV P   P   A   +  A D++  A
Sbjct: 11  LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I +TL++A+A C LV+GTSAR R +PWP+L+P+E     V       VALVFGRE  GL
Sbjct: 71  EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL  C++HV I  +P+YSSLNLA AVQ++ YE+R+A L+  E+     + +      
Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKN---YWDVELANT 187

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
              E    H+++ +    F   ++P +++ ++RR F R+  +  E NI RG+ A+I+++ 
Sbjct: 188 QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQKKL 247

Query: 241 KG 242
           K 
Sbjct: 248 KQ 249


>UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7RCC9_KANKD
          Length = 277

 Score =  307 bits (787), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 117/259 (45%), Positives = 160/259 (61%), Gaps = 18/259 (6%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P   P  +A+  ++GA DV+ NA
Sbjct: 15  LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VDT++EALA C L++GTS+R+R LPWP+++PRE G          PVA++FGRE  GL
Sbjct: 75  QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEARPVAIMFGRESTGL 134

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV---------- 170
            NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A     E   +           
Sbjct: 135 LNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAELGY 194

Query: 171 --------EHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222
                   + E       ++++  Y HLE T+  T F     P  +  ++RR+  +AR  
Sbjct: 195 DAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKARLN 254

Query: 223 SQELNILRGILASIEQQNK 241
             E+NILRG L+SI++  K
Sbjct: 255 KGEVNILRGFLSSIDKYIK 273


>UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae
           RepID=C9R390_AGGAD
          Length = 241

 Score =  305 bits (781), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P    D QAIALAAGA DV+ +A
Sbjct: 1   MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              ++  +A+A CSLV+GTSAR R L   +++PRECG K+VA A N  VA+VFGRERVGL
Sbjct: 61  VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYP 178
           TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L        + + +    YP
Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            +++LE F+ H EQ   + GFI+      VM +LRRL+ RA  E  ELNIL G+L+++E+
Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQG---VMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237

Query: 239 QNK 241
           + K
Sbjct: 238 KLK 240


>UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VS87_ALCBS
          Length = 261

 Score =  299 bits (767), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 116/260 (44%), Positives = 172/260 (66%), Gaps = 15/260 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P   P  +A A A+GA DV+  A
Sbjct: 1   MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP----VALVFGRE 116
            + +++DEAL G +LV+GTSAR R +PWP L PR+   +   + AN P    +A++FGRE
Sbjct: 61  QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE--- 173
             GLTN+EL++C+ HV++ ANPEY  LN+A AVQ+I+YE+R+A L      ++       
Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180

Query: 174 --------ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225
                   + P    + +  F  HLE+ +  +GF+    PGQVM ++RRLF RARP+  E
Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240

Query: 226 LNILRGILASIEQQNKGNKA 245
           ++ILRG+L ++E++ + ++ 
Sbjct: 241 MSILRGVLVALEKKMQRDEG 260


>UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2
          Length = 249

 Score =  297 bits (760), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 112/244 (45%), Positives = 154/244 (63%), Gaps = 3/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NIRIVLVE SH+GN+GS ARAM  MGLTNLWLVNP    D +AIAL+  A++V+ NA
Sbjct: 4   LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERV 118
            IV  L EAL     VVGTSAR R +  P+    +     +   + ++  +A++FGRER 
Sbjct: 64  RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-Y 177
           GL NEEL   + H  I +N  Y+SLNLA AVQ++AYE+    +   +  E  E+      
Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             V +L+  Y H E ++L +GF+ ++ PG VM+K+RRLF R+  ESQE+NILRG L S++
Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243

Query: 238 QQNK 241
            + K
Sbjct: 244 NKGK 247


>UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria
           RepID=Q2YB91_NITMU
          Length = 267

 Score =  297 bits (760), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/244 (47%), Positives = 149/244 (61%), Gaps = 4/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  +RIVL  TSH GN+G  ARAMKTMGL +L+LVNP   PD +A   A GA D++  A
Sbjct: 24  LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + DTLDEAL+G  L    +AR R L   + D R+   K +  A    VALVFG E  GL
Sbjct: 84  KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----HEETP 176
           T  E+ KC   + I ANPEYSSLNLA AVQV+AYE+RMA     E          H    
Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               D++E  Y HLEQ  +++GF+    P ++M ++RRLF RAR E +E+NILRGIL++ 
Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263

Query: 237 EQQN 240
           E++ 
Sbjct: 264 EKRM 267


>UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24
           Tax=Gammaproteobacteria RepID=Y380_HAEIN
          Length = 241

 Score =  294 bits (753), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 130/246 (52%), Positives = 173/246 (70%), Gaps = 6/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P    D Q+ AL+AGA +++ NA
Sbjct: 1   MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPK-SVDEQSYALSAGAENIVKNA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD+ DEA+  CSLV+GTSAR R L   +++PREC  K V  A    +A+VFGRER+GL
Sbjct: 60  RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVV--AYKGKIAIVFGRERIGL 117

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L        +   E  YP  
Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           D L  F+ + E+   + GFI+      VM KL+RL+ RA+ E  ELNIL G+L+++E++ 
Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQG---VMRKLKRLYYRAKLEKNELNILNGMLSAVEKRI 234

Query: 241 KGNKAE 246
              K +
Sbjct: 235 DLTKED 240


>UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli
           RepID=A8PK88_9COXI
          Length = 239

 Score =  293 bits (751), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 5/238 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIVLV+T+  GN+G+ ARAMKTMGL  L+LV P   P   A   A+ A D++ +A 
Sbjct: 3   LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VD L+EAL  C LV GTS R R   W  L PR    K +       +A++FG+ER GLT
Sbjct: 63  VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEKIMNHC-QQKIAILFGQERCGLT 121

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L      + ++    P   V 
Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFLQE----KNIKKRTVPLADVK 177

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             + FYG L++ L    F++ N    VM+KLRR+F+RA  +S E+ IL+GI +++E++
Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235


>UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QVJ6_CHRSD
          Length = 246

 Score =  293 bits (750), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 119/246 (48%), Positives = 163/246 (66%), Gaps = 3/246 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLV+T H GN+G  ARAMKTMGL++L LVNP   PD++A  LAAGA+DVI NA
Sbjct: 1   MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119
            +V+ + +A+  C  VVG SAR R+LP P   DP     + +  A + PVALVFGRER G
Sbjct: 61  RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LTN+E++ C + V+I ANPEY  LNLA AVQ++AYEVR AW   Q +    +   +  P 
Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPATSQTPPS-LPT 179

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D +  F  HL + L+ +GF+ + H  +  + LR LF RA+P  +EL+ILRG+L+++E+ 
Sbjct: 180 RDQMAHFEAHLHEALVTSGFLTQPH-ARTEDHLRALFARAQPSRKELSILRGVLSTLEKA 238

Query: 240 NKGNKA 245
               ++
Sbjct: 239 GSNPRS 244


>UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5
          Length = 256

 Score =  290 bits (743), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/241 (48%), Positives = 151/241 (62%), Gaps = 1/241 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P   PD +A ALA+GA D++ +A 
Sbjct: 6   LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +   LD AL GC  V GTSAR R + WP  + RE   + +A+      AL+FGRER GLT
Sbjct: 66  VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180
           N E+ +C   V I    EY SLNL  AVQV+AYE+ MA L  Q   +    +       +
Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAALTAQPAQDVPAEDVPEQPAPI 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +D+E FYGHL+  L  +GF++E    ++M +LRRLF RARP   E+NILRGIL  IE+  
Sbjct: 186 EDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIERWA 245

Query: 241 K 241
            
Sbjct: 246 S 246


>UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus
           ATCC 51756 RepID=C6NVG4_9GAMM
          Length = 263

 Score =  289 bits (740), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 115/246 (46%), Positives = 149/246 (60%), Gaps = 3/246 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  ++RIVLVETSH GN+GS ARAMK MGL  L LV P   PD+QA ALA+GA D++  A
Sbjct: 17  LAPDLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERA 76

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + D L  ALA C  V GT+AR R + WP L  R    + VA  A+ PVA++FG ERVGL
Sbjct: 77  EVYDDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGL 136

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N EL  C   + I     Y SLNLA AVQ++AYE+ +A   T+     V     P    
Sbjct: 137 SNRELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRAA- 195

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             +E FYGHL Q L   GF++      +M +LRRLF RARP+  E+ ILRGIL  +E+  
Sbjct: 196 --MEGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWA 253

Query: 241 KGNKAE 246
           + +K +
Sbjct: 254 QMDKGD 259


>UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum
           RepID=Q7NRY2_CHRVO
          Length = 244

 Score =  288 bits (738), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 5/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +QNIR+VL   +H GN+GS ARAMKTMGL+ L+LV P V P  +A ALA+GA D++ NA 
Sbjct: 1   MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
           +V +L EAL+  ++    ++R R L  P+  PR+   + +A A +   VALVFG E  GL
Sbjct: 61  VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + EE+++C+  V I  NP+Y SLNLAMAVQV+ YE+        E        E      
Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYELFSHTGVDVE----YLRAEGEAATQ 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +++   GHLEQ +   G+ +  +  ++M ++R +F RA    +E++ILRG    +++  
Sbjct: 177 SEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQRTA 236

Query: 241 KGNKAE 246
            G   +
Sbjct: 237 SGRSGD 242


>UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira
           halophila SL1 RepID=A1WXZ7_HALHL
          Length = 249

 Score =  287 bits (735), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 4/236 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L+  RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P   P D +A+A AAGA DV+  A
Sbjct: 3   LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L  AL GC L  G SARSR    P L+ R     +VA+  +  +A VFGRER GL
Sbjct: 63  RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL  CHY V I  +P+YSSLN+A +VQ++A+E+RMA  A    G      E P   V
Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMAAAA---GGPVQGQAEEPPAAV 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           D LERF+ HLE+     G++  ++P   M +LR +F RA     E+ +LRG+++ +
Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHV 235


>UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14
           Tax=Acinetobacter RepID=B7H3X7_ACIB3
          Length = 279

 Score =  287 bits (734), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 106/253 (41%), Positives = 147/253 (58%), Gaps = 11/253 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIV+V T+   N+GS  RAMKTMGL+ L LV+P   P     ALAAGA D++    
Sbjct: 13  LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
           IV+TL+EA+  C LV GTSARSRT+PWP+LD R    +++  AA    +A+VFGRE  GL
Sbjct: 73  IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE--------- 171
           TNEEL   +YH+ I  N +Y  LN+A A+QV+ YE+RM+ L  +E               
Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192

Query: 172 -HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230
              + P      +E FY HLE+ L    F+   +P  +  +LRRLF R + +  E ++LR
Sbjct: 193 MQWDEPLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYHLLR 252

Query: 231 GILASIEQQNKGN 243
           GI + ++    G 
Sbjct: 253 GIFSRVQALTSGK 265


>UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella
           nitroferrum 2002 RepID=B9Z1W4_9NEIS
          Length = 254

 Score =  285 bits (730), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 102/250 (40%), Positives = 150/250 (60%), Gaps = 8/250 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+NIR+VL   SH GN+GS ARAMKTMGL+ L+LV P   P  +A  LA+GA D++ +A
Sbjct: 9   FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
            +V+TL EAL+  ++    ++R R L  P+  PR+   + VA A +   VALVFG E  G
Sbjct: 69  VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ +E+++C+  V I  NPEY SLNLAMAVQV+ YE+        +        E     
Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYELFSHTGVDVD----YLRAEAESAT 184

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ- 238
            D++E F GHL+QTL   G+    +  ++M +LR LF RA    +E++ILRG L  +++ 
Sbjct: 185 RDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQRV 244

Query: 239 --QNKGNKAE 246
             ++ G + +
Sbjct: 245 AHRDDGRRQQ 254


>UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO
          Length = 282

 Score =  284 bits (728), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/254 (44%), Positives = 153/254 (60%), Gaps = 13/254 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L ++RIV+V T+   N+GS  RAMKTMGL+ L LV P   P     ALAAGA+D+I    
Sbjct: 13  LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--VALVFGRERVG 119
           IV+TL +A+  C LV GTSARSRT+PWP+LD R    KS++   N    VA+VFGRE  G
Sbjct: 73  IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE-------- 171
           LTNEEL   +YHV I  N +Y  LN+A A+QVI YE+RMA LA  E+G+           
Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192

Query: 172 ---HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228
                + P    + +E+FY H+E+ L    F+   +P  +  +LRRLF R + +  E ++
Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252

Query: 229 LRGILASIEQQNKG 242
           LRGI + ++  N G
Sbjct: 253 LRGIFSRVQALNNG 266


>UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9
           Tax=Desulfuromonadales RepID=A1ALQ6_PELPD
          Length = 251

 Score =  284 bits (727), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 7/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  ++ IV+VE    GN+G V RAMK MGL+ L LV    +   +++  A  A D++  A
Sbjct: 8   IADSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERA 67

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERVG 119
            + D L  ALA C+L VGT+ R       +L P +        A  +   ALVFGRE  G
Sbjct: 68  ELYDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQGDCRGALVFGREDSG 127

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LT +EL  C +H  I  + EY SLNL+ AV +  YE+  A  +      ++         
Sbjct: 128 LTTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKASDSPGGGRTEI------PAT 181

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             ++E  +  ++ +L   GF+ E +PG +M  LRR+  R+  +++EL ILRG+ + ++  
Sbjct: 182 SAEMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWA 241

Query: 240 NKG 242
             G
Sbjct: 242 CSG 244


>UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Desulfuromonadales RepID=Q3A4B2_PELCD
          Length = 244

 Score =  283 bits (726), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60
             +I +VLVE     N+GSV RAM   G ++L LVNP+       A  +A  AS ++  A
Sbjct: 3   FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +   L  ALA C+L  GT+ R        L P +   + +       VA VFGRE  GL
Sbjct: 63  RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
              EL  C   V I  +    S+NLA +V +  YE     +A    G+    + T    +
Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSR--VAAIACGKTAGRKST--SSI 178

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE  Y H+  TL   GF+   +P  ++   RR+F RA    +E+ ILRG+ + ++  N
Sbjct: 179 ATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWLN 238

Query: 241 KGNKAE 246
              + E
Sbjct: 239 GQRREE 244


>UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus
           RepID=Q2JI62_SYNJB
          Length = 276

 Score =  283 bits (724), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 88/248 (35%), Positives = 124/248 (50%), Gaps = 7/248 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  +R+VLV+ +   N+G++AR MK MG     LV+P   P D +AI  A   +D++  A
Sbjct: 12  LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             V TL EAL GC  V GT+ RS+T P  W +  PR+     +A         VFG E  
Sbjct: 72  RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAAL---VFGPEDR 128

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NEEL  CH  + I  +  Y SLNLA AV +  YE+    +    +            
Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELY-TLVCQSPSPAPPMPSPQRLA 187

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             + LE F+ HLE  LL  G++  +   + M K R LF RA     E+ +LRGIL  ++ 
Sbjct: 188 PFELLEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQLQW 247

Query: 239 QNKGNKAE 246
               ++ E
Sbjct: 248 SQGCSRQE 255


>UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Gammaproteobacteria RepID=Q31I12_THICR
          Length = 268

 Score =  281 bits (720), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/246 (45%), Positives = 154/246 (62%), Gaps = 8/246 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  I+IV+VETSH GN+G+VARAMK MGL+ L LVNP   P   A A A+GA+DV+ +A 
Sbjct: 11  LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA----EAANTPVALVFGRER 117
           +V+TL++A+A C LVVG SAR R + WP LD R+    ++     E  +  VA++FGRE 
Sbjct: 71  VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETP 176
            GL+N EL KCHY   I  NP YSSLN+A AVQV  YE+ MA  + +    E   H+   
Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMATDIKSVHEAEGYRHK--- 187

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               D +E FY HL Q L    F+      + M ++RRLF R++ + +E++ILRG+L + 
Sbjct: 188 LASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAA 247

Query: 237 EQQNKG 242
           ++Q K 
Sbjct: 248 QRQTKQ 253


>UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria
           RepID=B2SXQ6_BURPP
          Length = 353

 Score =  280 bits (718), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/256 (40%), Positives = 150/256 (58%), Gaps = 13/256 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58
             + R VLVE SH GN+G+ ARA+KTMG + L LV+P V   + D +AIA+A+GA DV+ 
Sbjct: 95  FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLA 154

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +AH+V TL +AL+G    +  +AR R    P   PR     +  +A +  +ALVFG ER 
Sbjct: 155 SAHVVPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERT 214

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-- 176
           GL+NE++++C     I ANP YSSLNLA AVQV+AYE+R  +L+        +       
Sbjct: 215 GLSNEDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAA 274

Query: 177 --------YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228
                       D++E  + HLE  L+A  F+   +P ++M++LRRLF R+  E +E+NI
Sbjct: 275 GEGEAVGARAASDEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLEREEVNI 334

Query: 229 LRGILASIEQQNKGNK 244
           +RGI   I  ++K   
Sbjct: 335 VRGIAKHILLKSKSKD 350


>UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34
           Tax=Burkholderiaceae RepID=Q3JQS9_BURP1
          Length = 346

 Score =  278 bits (713), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIG 58
             + R VLVE SH GN+G+ ARA+KTMG + L LV P V   + D +A+A+A+GA DV+ 
Sbjct: 62  FTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLA 121

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +AH+V TL +AL G    +  +ARSR    P L PR     ++ +     +ALVFG ER 
Sbjct: 122 SAHVVPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERT 181

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NE +++C     I ANP YSSLNLA AVQV+AYE+R+A L   E+    +       
Sbjct: 182 GLSNEHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLA 241

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
             D++ER + HLE  L+A  F+   +P ++M +LRRLF R   E +E+NI+RGI   I
Sbjct: 242 QSDEIERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299


>UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JRV8_9GAMM
          Length = 239

 Score =  278 bits (712), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/237 (43%), Positives = 143/237 (60%), Gaps = 1/237 (0%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
           R+V+V T  + N+G+VARAMK MGL +L LV P   P   A   AAGA DV+ N  + D+
Sbjct: 2   RVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALADS 61

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124
           ++EA+A C  VV TSAR R   WPM + R+   ++   +     VA++ G ER GL ++ 
Sbjct: 62  VEEAIADCHWVVATSARRRGYEWPMSNARQSMSEAYRRSQEGQQVAILLGPERSGLDSDS 121

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L+ C  H  I+ANP+Y  LN+A A QV+ YE+  A  A  E  E  +     YP  + +E
Sbjct: 122 LRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPKHEAVE 181

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            FY HLE  L   GF+R  HPG  + KLRRL T+A+ E  ELN+LRGIL++IE+  +
Sbjct: 182 HFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIERLER 238


>UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QKR3_DESAH
          Length = 247

 Score =  278 bits (712), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 79/244 (32%), Positives = 113/244 (46%), Gaps = 5/244 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
           Q I +VLVE     N+GSV RAM   G + L LVNP     +  A  +A  A  ++  A 
Sbjct: 4   QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VDTL +AL  C L  GT+ R        L P + G     E      ALV GRE  GL 
Sbjct: 64  VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
             EL+ C   V I     Y S+NL+ A  ++ Y+  MA   T      +    TP     
Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           +L   Y H+ ++L    F+   +P  ++   RR+F RA  + +E+ I+RG++  I+    
Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRIDWTES 239

Query: 242 GNKA 245
             K 
Sbjct: 240 ERKK 243


>UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1DBE0_LARHH
          Length = 268

 Score =  277 bits (710), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 5/242 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+N+R+VL   S   N+GS ARAMKTMGLT L+LVNP   PD +A  LA+GA DV+  A
Sbjct: 19  FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
            +  +L EAL G +L    ++R R +  P+  PR    + +  A     VALVFG E  G
Sbjct: 79  VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ EE  +C+  V IA NP+Y SLNLA AVQV++YE+        ++       +T    
Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYELFSQLDFPLDHL----RFQTERAS 194

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++E  YGHL+ TL   GF    +  ++M +LR LF RA  E QE++ILRGIL  +E++
Sbjct: 195 RDEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254

Query: 240 NK 241
             
Sbjct: 255 TG 256


>UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB
          Length = 256

 Score =  274 bits (702), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 4/236 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           +VL E     N+G VARAM   GL +L L+NP    P  +A + ++ A  VI  A + D+
Sbjct: 16  VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           ++EA+A   LV  T+ARSR +P P++ P E   +SVA+     P   +FGRER GL N+E
Sbjct: 76  VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   +  V +  +P Y+SLN+A AV V AYE R    A        ++E  P    + ++
Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEP-ATQESIQ 194

Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           R + HLE  L A GF R        + +LR +F +A     E+ I+RG+++  E+ 
Sbjct: 195 RMFDHLESGLDARGFFRPVEKKPVTIRRLRNIFQKADLTDNEVRIMRGVISCFEKY 250


>UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LY86_SYNAS
          Length = 263

 Score =  272 bits (696), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 7/236 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60
           L++I +VL    + GN+GS AR  K MG+  L +V+       +   ++   A+DV+ + 
Sbjct: 18  LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L EAL+G + +VGT+AR      P++ PRE   + +  + +  VAL+FG E  GL
Sbjct: 78  VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN++L+ CH  V+I  +  + SLNL+ AV ++ YE+ +A     E G  V          
Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVA-----ETGIPVRFTPKM-ASS 191

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
            +LE  YGH+   L   GF+   +P   M  +RRLF+R R +++E+ I+RGI   +
Sbjct: 192 RELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGICRQL 247


>UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus
           sp. PCC 7335 RepID=B4WI29_9SYNE
          Length = 304

 Score =  272 bits (696), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 43/287 (14%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  IRIVLV  +   N+GSVAR MK  GL+ L+LV+P      ++A+ +A  A DV+  A
Sbjct: 15  LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRER 117
            IV T+ +ALAGC   + T+AR+R    P+  P       +      P+   AL+FG E 
Sbjct: 75  QIVPTIPKALAGCEYAIATTARTRGFNVPLDPPETALPNLLTSNPQQPIRQTALLFGPED 134

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV------- 170
            GL+N+EL      + I  +  YS+LNLA AV +  YE+         N           
Sbjct: 135 RGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIESS 194

Query: 171 --------------------------------EHEETPYPLVDDLERFYGHLEQTLLATG 198
                                           EHE+ P   ++++ER+Y HLE  LL  G
Sbjct: 195 LENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQVG 254

Query: 199 FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245
           ++  +     M K+R+L  RA P S E+ +LRG++  IE     +K 
Sbjct: 255 YLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIEWALSHSKQ 301


>UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1
           RepID=C7RMU6_9PROT
          Length = 265

 Score =  272 bits (695), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 114/243 (46%), Positives = 153/243 (62%), Gaps = 1/243 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L+ IRIVL  TSH GN+G+ ARAMKTMG++ L LVNP   PD +A+A AAGA D++G A 
Sbjct: 14  LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  TLD ALA    V   SAR R L  P L  R+  +  VA A    VAL+FG E  GL+
Sbjct: 74  VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180
           N E+Q+C   V I A+P Y+SLNLA AVQ++ YE+R+A  A             +P  + 
Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFAGSPPVVTRTMPFASPPAVH 193

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            D+ERFY HLE+ ++A+ F+    P +++ KLRRLF R   ES E+NILRG+L ++E++ 
Sbjct: 194 QDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVERKL 253

Query: 241 KGN 243
            G 
Sbjct: 254 AGP 256


>UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LVT8_DESBD
          Length = 248

 Score =  271 bits (694), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 4/240 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGN 59
           ML+NI ++L    +  N+GSVARA   MG   + LV P      +A+ LA   A  ++ N
Sbjct: 1   MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEA-ANTPVALVFGRERV 118
             I  TL EALA  S   GT+AR+      +  P E   + + ++ A   VA+VFG E  
Sbjct: 61  IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLTNEE   C+  + I      +SLNL+ AV V+ YE     LA  +  +     +  Y 
Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             ++ E  +  L +TL+   F+ +++P   M  L+R F R  P   E N+L G+   + +
Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGLCRQMRR 238


>UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria
           RepID=A8ZWU6_DESOH
          Length = 260

 Score =  270 bits (690), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 8/243 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNAHIV 63
           I I+LV      N+G+  RAMK MGL+ L +V P      + +  A  A  DV+    IV
Sbjct: 14  ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
                A++  S + GT+AR       +L P     K+V      PVA++FG E  GL NE
Sbjct: 74  GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +LQ CH  V I  + E+SSLNLA AV VI YE+  A    Q      +H +       +L
Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           E  Y  +++ LLA  F+R ++P   MN  RR  +R    ++E+ ++RG+   +    +  
Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQVNWYGEKR 246

Query: 244 KAE 246
            A+
Sbjct: 247 YAD 249


>UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH
          Length = 260

 Score =  269 bits (689), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
           +N+RIVLV TSH GN+GSVARAMKTMGL  L LV P    PD QA A A+ A DV+  A 
Sbjct: 12  ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             D LD ALAGC LV+G SAR R +    +LD RE G + VAEA + PVAL+FGRER GL
Sbjct: 72  RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL +C   V I ANPEY SLNLA AVQV+ +EV MA       G  V          
Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMA------RGAGVVAPTRRSASA 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
            D+E F+ HL +     GF+R+++P  +M +LR+LF RA P+  EL +LRG+LA++E
Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242


>UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples
           RepID=A4GJJ4_9BACT
          Length = 243

 Score =  269 bits (689), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 6/235 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE SH GN+G+ ARA+K MG   L LVNP  K   +A   A  A D++ N  I 
Sbjct: 8   DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            + D A+   +L++ TSAR RT+PWP   +D     +KS  +   T   +VFGRE  GL+
Sbjct: 68  KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R      +    +V    +      
Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVREVVSNL---- 183

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           + E+   HL + L    F       QV  ++ RL  + R +  E+ ILRG L+ I
Sbjct: 184 ENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238


>UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803
           RepID=Q55896_SYNY3
          Length = 240

 Score =  268 bits (687), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 95/240 (39%), Positives = 125/240 (52%), Gaps = 8/240 (3%)

Query: 11  ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEA 69
           E     N+G++ARAMK MGL  L LVNP     S +A  +A  A DV+  A +VD L  A
Sbjct: 2   EPQGERNVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATA 61

Query: 70  LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCH 129
           L     ++ TSAR R L  PM  PR+     +  A N   ALVFGRE  GLTNEEL + H
Sbjct: 62  LGDRQRIIATSARERILQSPMETPRQALPWLL--APNLKSALVFGREDSGLTNEELNQAH 119

Query: 130 YHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-----ETPYPLVDDLE 184
             V I  +P+Y SLNL+ AV V  YE+  A LA + N +            P      L+
Sbjct: 120 RFVRIPVHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLD 179

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
            +  HLE+TLL    +  +     M K RR++ RA   S+E+ +LRGIL  I+   +  K
Sbjct: 180 SYCQHLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQIDWLAQQIK 239


>UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales
           RepID=Q473D9_RALEJ
          Length = 314

 Score =  268 bits (687), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 9/253 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57
           M   +R VLVETSH GN+GSVARA+KTMG  +L LV+P    V+    A+A+A+GA DV+
Sbjct: 45  MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLK---SVAEAANTPVALVFG 114
             A IVD+++ AL G +  V  +AR R    P L PR+   +   S+A  A   +A VFG
Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE- 173
            ER GL N+ +++C     I ANP Y+SLNLA AVQ+IAYE+R+A L   +         
Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224

Query: 174 --ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                    + +E  +GHL+Q L A GF+   +P ++M +LRRL  RA  E +E+NILRG
Sbjct: 225 GYAGEPATAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILRG 284

Query: 232 ILASIEQQNKGNK 244
           I   +    +G +
Sbjct: 285 IAKHMLIAVRGGR 297


>UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V5A5_9PROT
          Length = 253

 Score =  268 bits (685), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/244 (48%), Positives = 155/244 (63%), Gaps = 5/244 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L NIR+VL  T+H GN+G+ ARAMK MGL+ L+L+NP   PD QA A+AAGA DV+ NA 
Sbjct: 7   LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  ++DEAL G  L VG +AR R +   +  PRE   + V +A    VAL+FG E  GLT
Sbjct: 67  VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEE  +    V I ANPE+SSLNLA AVQVI+YE+ +A     +N + VE    P     
Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVA----AQNYQPVEQSLQPAA-HQ 181

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            +E F  HLE+TL   GF    +P ++M +LRRL+ RARPE+ E+NILRGIL+   + N 
Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241

Query: 242 GNKA 245
             KA
Sbjct: 242 RLKA 245


>UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria
           RepID=Q6SFH7_9BACT
          Length = 248

 Score =  265 bits (678), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 2/241 (0%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
              +IVL  TSH GN+GS ARA+KTMG T+L LVNP   P ++A ALAAGA D++ NA I
Sbjct: 9   DQFKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V T+++AL    L++G +AR R L     + RE   K  +E+ +  +AL+FG E  GL+N
Sbjct: 69  VSTIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSN 128

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +E++ CH    I +N +YSSLNLA A+Q+I YE+RM    +++N      ++      + 
Sbjct: 129 DEVKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQL--SEDNAIIQSSKKNELVTHEV 186

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
              FY HLEQ L   GF+++    ++M +LR LF R   E  E+NILRGIL  I+++ K 
Sbjct: 187 QNGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQKKIKD 246

Query: 243 N 243
            
Sbjct: 247 K 247


>UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium
           MedeBAC49C08 RepID=Q4PK37_9BACT
          Length = 239

 Score =  265 bits (678), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 5/238 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + QN+  VLVETSH GN+G+ ARAM +MG+ NL LVNP   P +++   A     V+  A
Sbjct: 3   IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVG 119
           +I D L+EA+   +LV+GTSARSR++PWPM++    G       A    V++VFG E VG
Sbjct: 63  NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLGKIINESLARKEKVSIVFGNEAVG 122

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NE+L KC +H+ I  + + SSLNL+ AVQ++A+E+     ++       +  E     
Sbjct: 123 LDNEDLGKCDFHLQIPTSED-SSLNLSHAVQIVAHEIYKGSSSSDLF---TQAREVELAS 178

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
               E+   H+E  L    F    +P QV  +LRRL  R + +  E+ ILRGIL+++E
Sbjct: 179 SQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236


>UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria
           RepID=A5CWV4_VESOH
          Length = 247

 Score =  264 bits (675), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 8/239 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              +R+V+V T+  GN+G+ ARAMK M L+ L+LVNP   P + A A A+GA DV+ +A 
Sbjct: 9   FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERVG 119
           + ++L+EAL G  LV+G SAR R + W  +D      K        +  VA++FG E+ G
Sbjct: 69  VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LTN+EL  C   + I  NP+Y SLN+A A+QV AY+  +    T+      +   +    
Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQNYIYNTPTE-----FKENVSKLAS 183

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237
            D+LE FY HL Q L    + ++ H    +M +LR  FT+  P+ +E++I RGIL +I+
Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242


>UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FH12_DESAA
          Length = 251

 Score =  262 bits (670), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 116/243 (47%), Gaps = 9/243 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60
            + I IVL E     N+G  ARAM  MGL  L +V P      +   +A AGA  +I + 
Sbjct: 7   FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD L  AL   + VVGT+AR  +    M        K ++      VALVFGRE  GL
Sbjct: 67  EVVDDLKTALKEFNWVVGTTARLGSHRKAM-TVENMAAKLISMTGENRVALVFGREDRGL 125

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + E+++ CH  V I     +SSLNLA AV ++ YE+  A        ++           
Sbjct: 126 STEDVRLCHQLVNIRTAG-FSSLNLAQAVLLVCYELFKA------GSDKPRESTPKLANK 178

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            DLE  Y  L + L+   FI   +P   M+ +RR FTR    ++++ I+RGI   ++   
Sbjct: 179 FDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVDWYT 238

Query: 241 KGN 243
           +  
Sbjct: 239 ERR 241


>UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae
           RepID=B0T711_CAUSK
          Length = 266

 Score =  261 bits (667), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/239 (32%), Positives = 111/239 (46%), Gaps = 5/239 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++L       N+G+VAR M   GL +L LV P    P  +A   A+GA+  + NA + D
Sbjct: 9   CVILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNAKVFD 68

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123
           TL+EA+A   LV  T+AR R    P++ PRE   +   E      V L+FG ER GL  +
Sbjct: 69  TLEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAGLETD 128

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++  C   ++I  +  + SLNLA AV + AYE +M          + E    P      L
Sbjct: 129 DIALCQAIISIPIDERFRSLNLAQAVSINAYEWKMTV--DDRPWVKFEQNVEPPADQSSL 186

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNK 241
              Y  LE+ L   GF         M   LR    RAR   QE+   RG++ ++ +   
Sbjct: 187 LGLYAQLEEQLEEAGFYHPPEKKPSMVRNLRAPLARARLTEQEVRTFRGVVTALSRGRG 245


>UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU
          Length = 231

 Score =  259 bits (662), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 77/246 (31%), Positives = 127/246 (51%), Gaps = 20/246 (8%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M  +++I+LVE  + GN+GSVARAMK  G ++L LVNP  +   +A A A+ A D++ +A
Sbjct: 1   MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNP-CELKMEARAFASHAYDILESA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
             V+T++EAL G  LV+ T+  +       +  P   PR+  LK      +  +A++FGR
Sbjct: 60  KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
           E  G TNEEL+     V+I  +  Y  +NL+ AV +I YE+            Q+   E 
Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYEMS-----------QILAGEN 166

Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                 DL   + H+++ L    +   +   +     +R+F RA+   +E+  LRG +  
Sbjct: 167 SLADGFDLRLLFEHIDEVLDDIDY-PAHKKEKTHLMFKRIFGRAQLMPREVQTLRGFIGK 225

Query: 236 IEQQNK 241
           +++  K
Sbjct: 226 VQKHIK 231


>UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus
           ruber DSM 1279 RepID=C1XJE3_MEIRU
          Length = 257

 Score =  259 bits (662), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 17/255 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ---------AIALAAG 52
           L+NIRIVLV +    N+G+ ARAM+  G+++LWLV P  +             A  LA  
Sbjct: 4   LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63

Query: 53  ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLP-WPMLDPRECGLKSVAEAANTPVAL 111
           A DV+    +VDTL EA+A   LVVGT+ R R +   P++ PR   L+    A    VA+
Sbjct: 64  AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123

Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171
           VFGRE  GLT +E+      V I  +P   SLNLA AV ++ YE+     A         
Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEIFGVAQAPPPP----- 178

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            E         L++ +  L++ +L  GF  E      + + RRL  +AR    E+ +LRG
Sbjct: 179 -EPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLLRG 237

Query: 232 ILASIEQQNK-GNKA 245
            L       + G + 
Sbjct: 238 FLHQSRWYAQHGRRK 252


>UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria
           RepID=B8HLP3_CYAP4
          Length = 262

 Score =  258 bits (661), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 126/238 (52%), Gaps = 7/238 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  +RIVLVE +   N+G+++R +K MGL  L LVNPL  P  ++A  +A  A D++  A
Sbjct: 12  LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             V TL +AL GC  ++ T+ R +        PR      +      P AL+FGRE  GL
Sbjct: 72  RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWLL----GHPAALIFGREDRGL 127

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL      + I  +P Y SLNLA AV V +YE+     A+Q   E +          
Sbjct: 128 TNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEPIAPGGGELARF 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           ++LE +Y  LE  LL  G++  +     M K RRLF R++P   E+ +LRGIL+ +E 
Sbjct: 186 ENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALLRGILSQVEW 243


>UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae
           RepID=B8H062_CAUCN
          Length = 263

 Score =  258 bits (660), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 111/239 (46%), Gaps = 5/239 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++L E     N+GSVAR M   GL++L LV P    P  +A A A+GA   + +A + D
Sbjct: 12  CVILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFD 71

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123
           TL+ A+A   LV  T+AR R    P+  PRE       E A    V L+FG ER GL  +
Sbjct: 72  TLEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETD 131

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++  C   V+I  +  + SLNLA AV + AYE +M          + E           L
Sbjct: 132 DIALCQAIVSIPIDERFRSLNLAQAVSINAYEWKMTQ--DDRPWRKFEQNVEEPADQAAL 189

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNK 241
              YGHLE  L   GF         M   LR    RAR   QE+   RG++ ++ +   
Sbjct: 190 LGLYGHLEDELEKAGFYHPPEKKPSMVRNLRAPLARARLSDQEVRTFRGVITALSKGRG 248


>UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms
           RepID=D0B958_BRUME
          Length = 291

 Score =  258 bits (659), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LV      N+G VARAM   GL  L LVNP    P  +A A A+ A  VI NA + D
Sbjct: 31  AIILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYD 90

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123
            L  A+A  + V  T+AR R    P+    E G              ++FGRER GL+NE
Sbjct: 91  DLPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEKTGILFGRERFGLSNE 150

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      +    NP ++SLN+A AV +++YE   + L  Q +       E P    ++L
Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237
             F+ HLE+ L   G+ R     ++M N LR + TRA   S EL +LRG++ S++
Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264


>UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC
          Length = 271

 Score =  257 bits (657), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/247 (37%), Positives = 130/247 (52%), Gaps = 10/247 (4%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
             I+IVL  TSHTGN+G+VARAMK MGL  L LV+P    D QA+A A  A+D++  A  
Sbjct: 18  DRIQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQ 77

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           VD L +ALA    V  T+AR R L  P++  R+      A  +   +++VFG ER GLTN
Sbjct: 78  VDNLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTN 137

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +E+      + I ANP+Y  LNL  AVQ++AYE RMA   T  +  Q   + T       
Sbjct: 138 QEISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMAH-GTARSAPQPNIDSTELATTAQ 196

Query: 183 LERFYGHLEQTLLATGFIRE---------NHPGQVMNKLRRLFTRARPESQELNILRGIL 233
              F   L + L  T F             +  ++M +LR L  RA P   EL +++GI+
Sbjct: 197 WAAFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIV 256

Query: 234 ASIEQQN 240
            ++ +  
Sbjct: 257 RALTEST 263


>UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium
           HF10_12C08 RepID=A4GJN4_9BACT
          Length = 245

 Score =  256 bits (655), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 5/242 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60
              I I+LV+T    N+G VAR+M   G TNL LV+P    P  +A+A+A  A +++ N 
Sbjct: 3   FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +  +L EAL+  S  +G +AR R +     D  +   +   +  N  + +VFG E  GL
Sbjct: 63  KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN+ L      V I  +  +SSLNL+ AV V  Y +      T++    V+    P+   
Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTEQ---LVDKNSEPHGSQ 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           +DL  F+ HLE+ L + GF +      ++   LR +F RA    +E+  LRG++  + + 
Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQNLRNIFHRADLSEREIATLRGVVRVLSEY 239

Query: 240 NK 241
            K
Sbjct: 240 RK 241


>UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5
          Length = 277

 Score =  256 bits (654), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 4/236 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LVE     N+G VARAM   GL+ L LVNP    P  +A A A+ A  VI    + +
Sbjct: 16  AIILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFE 75

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
           TL+EA+   + V  T+AR R    P+  P         +  A     ++FGRER GLTNE
Sbjct: 76  TLEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEKTGILFGRERWGLTNE 135

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      V    NP ++SLN+A AV +++YE   + +         +  E      + +
Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYEWMKSGMDD-LGETLFQPIEQRPSTKEQV 194

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQ 238
              + H+E+ L A G+         M + LR + +R     QE+++ RG++ S+++
Sbjct: 195 FGLFEHIEEALDARGYFHPAEKKPKMVDNLRAVLSRRGFSEQEISVFRGVIRSLDR 250


>UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHT7_SYNFM
          Length = 257

 Score =  256 bits (654), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 8/246 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNA 60
           L+NI IVL E  +  N+G+ AR+ K MG+  L +VNPL     + + +A  A  DV+   
Sbjct: 5   LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I D L  ALA    VVGT+AR  +    + +PR+   + V+ +     A++FG E  GL
Sbjct: 65  EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNE+L+ C + V I    +++S+NLA AV ++AYE+  A      N E+ +         
Sbjct: 125 TNEQLRFCDFLVTIPTA-DFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +LE  Y  L  TL    FI +++P   M  +RR F+R    + E+ I+RGI   I+   
Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQIDWYC 237

Query: 241 KGNKAE 246
                +
Sbjct: 238 DRKDED 243


>UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD
          Length = 255

 Score =  255 bits (653), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 89/252 (35%), Positives = 141/252 (55%), Gaps = 14/252 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD----SQAIALAAGASDVI 57
              ++ ++V+ SH GN+GS ARA+KTMG  +L LV P   PD     +A+ALA+GA+DV+
Sbjct: 5   FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPR-YPDMTSQPEAVALASGATDVL 63

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFG 114
             A +  TL+EALA  +L    +AR R L  P  D R+      + +A   +   A+V G
Sbjct: 64  ERARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLG 123

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL----ATQENGEQV 170
            ER GLTN ++  C     I ANPEYSSLN+A A+Q+ A+E+R A L    AT       
Sbjct: 124 TERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALLRANGATLLPASTA 183

Query: 171 EHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228
           +  +        + ++ F  H ++ L+   F+   HP ++M ++R LF+R+     E+++
Sbjct: 184 QQPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEIDM 243

Query: 229 LRGILASIEQQN 240
           LRG+  ++ ++ 
Sbjct: 244 LRGVCTAMLRKK 255


>UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH
          Length = 384

 Score =  255 bits (652), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 80/245 (32%), Positives = 119/245 (48%), Gaps = 8/245 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
           Q   IVLV      N+G+ ARAM+  GLT L LV P    P+  A   AAGA DV+  A 
Sbjct: 137 QKPAIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQ 196

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  T  EA+A C+ +  T+ R R +  P++ P E      ++A     A++FG ER GL 
Sbjct: 197 VFATTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQA--GKSAVLFGPERSGLE 254

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            E++      + +  +PE+ SLNLA AV + AYE    W    E  +  + +  P     
Sbjct: 255 TEDVALARAILTVPIDPEFGSLNLAQAVILCAYE----WSKGAELEQPTQEDLLPPAPQA 310

Query: 182 DLERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +L+    HLE  L   G+    N        LR + T+      E+  LRG+L+S+++ +
Sbjct: 311 ELDDLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGD 370

Query: 241 KGNKA 245
           K  K 
Sbjct: 371 KVPKG 375


>UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HY98_THIIN
          Length = 260

 Score =  255 bits (651), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 7/242 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58
           L +   VLV TSH GN+G+ ARA+K MG  NL LV P         + +A A+GA DV+ 
Sbjct: 18  LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPETLAFASGAEDVLK 77

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRER 117
            A +   L +A+A C +VV  SAR R    P+  P      +   A     VA VFG ER
Sbjct: 78  TAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRRVAFVFGSER 137

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL+N ++ +C   ++I ANP Y+SLNLA AVQVIA+E R        +  +    E+  
Sbjct: 138 FGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQAESVA 194

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
               +++    H+EQ LLA   +  N P +++ +L+RL +RA     E+ ILRG+  ++ 
Sbjct: 195 ATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVCTAVL 254

Query: 238 QQ 239
           ++
Sbjct: 255 RK 256


>UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae
           RepID=Q1GGZ7_SILST
          Length = 249

 Score =  254 bits (649), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 6/243 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
            VLV      N+G  ARAM   GL  + +V P    P+ +A+A+A+GA  ++  A +   
Sbjct: 10  FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           L EALA C+ V  T+AR R L  P+  P     K+         VA++FG ER GL N++
Sbjct: 70  LPEALADCTYVFATTARPRELTKPVFSPEGAMKKAAELMVQGEKVAVLFGPERAGLENDD 129

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           + K +  + +  NPE++SLNLA  V + AYE R      Q   E  E  ++ +    ++E
Sbjct: 130 IAKANAIITVPVNPEFASLNLAQCVLLTAYEWRRQQ--EQVAHETFEIGKSEWATNQEVE 187

Query: 185 RFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
               H E+ L   G F        +    R L++R +    ++ +L G++  + +  K  
Sbjct: 188 ALVNHYEERLTEAGYFFPPEKAPGMKTVFRNLWSRMQLTRADVQMLHGVMRQMVRW-KQR 246

Query: 244 KAE 246
           + +
Sbjct: 247 EED 249


>UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105
           RepID=A6GQ32_9BURK
          Length = 269

 Score =  254 bits (649), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 10/247 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58
           L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P  K      +AI+LA+GASDV+ 
Sbjct: 7   LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRER 117
            A I +TL EALA  S+    SAR R L   +  P+E   +++    +    A VFG ER
Sbjct: 67  QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------TQENGEQVE 171
            GL+N+EL  C+  V IAANP YSSLNL+ AVQ++AY +R  W A       Q +     
Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            +      V  +     H  + + A  F+  + P +V+ +L R+  +   E +E+++LRG
Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246

Query: 232 ILASIEQ 238
             + + +
Sbjct: 247 FFSDVIR 253


>UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae
           RepID=B7A9R4_THEAQ
          Length = 244

 Score =  253 bits (648), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 95/249 (38%), Positives = 126/249 (50%), Gaps = 14/249 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS----QAIALAAGASDVI 57
           L  +R+VLVE     N+G+VARAM+  GL  L+LVNP  +       +A  LA  A +++
Sbjct: 5   LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRE 116
             A  VD+L EALA   LVV T+ R R L   P++   E   + +  +    VALVFGRE
Sbjct: 65  DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPAWEVPARVL--SVEGEVALVFGRE 122

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GLTNEEL   H    I   PE  SLNLA AV V AYE+  A    +   E        
Sbjct: 123 TFGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPRE-------E 175

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
              V  LE F+  L + +L  GF  +N     M +LRR+F +AR    E+ +LRG+L   
Sbjct: 176 LAQVAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQS 235

Query: 237 EQQNKGNKA 245
             Q +    
Sbjct: 236 RYQMRKKDG 244


>UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales
           RepID=Q28PL2_JANSC
          Length = 258

 Score =  253 bits (646), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 5/244 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
             VLV      N+G+ ARAM   GL  + +V+P    P+ +A+ALA+GA  ++ NA +  
Sbjct: 16  AFVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQ 75

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
            L  AL+ C+ V  T+AR R L  P++ P     ++ A  A    V ++FG ER GL N 
Sbjct: 76  DLPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENA 135

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++      +++  NP + SLNLA  V + AYE +          E +   +T +    ++
Sbjct: 136 DIAPADAIISVDVNPAFPSLNLAQCVLLCAYEWQRQGSTVAP--EVMALAKTDFASNLEV 193

Query: 184 ERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           E+   H E+ L   GF         +   LR L+ R      ++  L G++  + +  +G
Sbjct: 194 EKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVRWAEG 253

Query: 243 NKAE 246
            + +
Sbjct: 254 RRKD 257


>UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio
           RepID=B8DKE7_DESVM
          Length = 266

 Score =  252 bits (644), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54
           ML N+ +VLV+T    N+G VARA   MG  ++ LV+P          ++A+ LA     
Sbjct: 1   MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60

Query: 55  DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVF 113
           D++    +V TL EA+A C++V GT+AR+      +L P     ++    A    VA+VF
Sbjct: 61  DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           G E  GLTN+E++ CH  + I   PE SSLNLA AV V+ YE                  
Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYECLKG--TATHPFRPGPAP 178

Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
           ++      +LE  +  L  TLLA  ++R ++P   M  +RR   R R    E +++ G+ 
Sbjct: 179 DSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEFDLVMGVC 238

Query: 234 ASIEQQ 239
             +++ 
Sbjct: 239 RQVKRM 244


>UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales
           RepID=B1Y5A0_LEPCP
          Length = 252

 Score =  251 bits (643), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 8/230 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAHI 62
           R +L+ TSH GN+G+ ARAMK MG  +L LV P         + +A+A+GA+D++  A I
Sbjct: 9   RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V TLDEAL G  +   T+   R    P   PRE        A    VA VFG ER G++N
Sbjct: 69  VATLDEALEGIHVACATAMTPRDFGPPTSTPREHLP--ALAAGGERVAFVFGSERYGMSN 126

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE+ +C   ++I   P+Y SLNLA AVQ++AYE RMA      +      +      +D+
Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMALGGYDVSARTPAVQ---RASLDE 183

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
           ++    H + TL+A GF+    P ++M +L++L  RA    +E++ILRGI
Sbjct: 184 VQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233


>UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YGR7_THEYD
          Length = 252

 Score =  251 bits (643), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 8/238 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+  VLVE   +GN+G+ ARA+K MG TNL L+NP V    +A  +A  + DV+  A I
Sbjct: 10  ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINP-VPLQDEAYWMAWASKDVLEKAQI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              LDE+L   +L++GT+ R       ++D ++   +    A N  VA++FGRE  GL N
Sbjct: 69  FRELDESLKDKALIIGTTRRRGAKRGAIIDVKDGVKRVYEVAQNNKVAILFGREDKGLFN 128

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE++KC Y + I  +    SLNLA AV ++AYE+        E  +        Y    +
Sbjct: 129 EEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYELMRC-----EELKDFHMNRQFYVSQTE 183

Query: 183 LERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           L++ Y  L + L    +I    +   +++N  R  F R      EL +L G+   IE+
Sbjct: 184 LDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEE 241


>UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae
           RepID=A1KUH1_NEIMF
          Length = 292

 Score =  251 bits (641), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 25/260 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------------KPD------ 43
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P +             P+      
Sbjct: 33  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92

Query: 44  --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+   + +
Sbjct: 93  LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVSELL 152

Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             A     VALVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+    
Sbjct: 153 QTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 212

Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220
            +   + +Q +H        + ++    H+E  +   GF    +  ++M +++ LF RA 
Sbjct: 213 GSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 268

Query: 221 PESQELNILRGILASIEQQN 240
            ++++++ILRG   ++  + 
Sbjct: 269 TQTEDIDILRGFFNTVSHRI 288


>UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755
           RepID=UPI0000D53114
          Length = 251

 Score =  250 bits (640), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 5/241 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G+VARAM   GL  L LV P    P+  A A+A+GA +V+ +A + + 
Sbjct: 13  VILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLTSAEVFEQ 72

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECG-LKSVAEAANTPVALVFGRERVGLTNEE 124
            ++A+   + +  T+AR R L   ++ P E   L    +     +  +FG ER GL N++
Sbjct: 73  TEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSERSGLINDD 132

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +    Y + +  NPE+SSLNLA AV ++ YE   A L  +    +     +    + + E
Sbjct: 133 IAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWG--NSELSTIGERE 190

Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            FY  LE+ L   GF+        +   LR +F++A   +QE+  L GI+ ++      +
Sbjct: 191 YFYKRLEKHLDEAGFLYPLELAPTICRNLRAMFSKATLTNQEIRTLHGIVTALSNYTPDS 250

Query: 244 K 244
           K
Sbjct: 251 K 251


>UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales
           RepID=A7IP45_XANP2
          Length = 298

 Score =  250 bits (640), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 113/242 (46%), Gaps = 5/242 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+GS ARAM   GL+ L +VNP    P   A   +AGA  ++  A +   
Sbjct: 19  VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124
           L  AL G +     +AR R +  P+L       ++ +  A    VALVFGRER GL  EE
Sbjct: 79  LRSALVGVNYAFAATARERGMAKPVLGADAVAQEARSRLAGGEDVALVFGRERTGLYTEE 138

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +  C   + +  NP ++SLNLAM V V  YE   A           +   +P     DL 
Sbjct: 139 VSLCDAILTLPVNPAFASLNLAMCVAVTGYEWFKAETGGALPFAPPDR--SPLADKGDLL 196

Query: 185 RFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            F+ HLE  L  +GF R        +  LR +F R     Q+L  L G + ++E+   G 
Sbjct: 197 AFFDHLEGALEQSGFFRSPEKAPSTIRNLRNIFHRLGLTRQDLATLHGAVTALEEGRAGR 256

Query: 244 KA 245
            A
Sbjct: 257 DA 258


>UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISG6_RHOCS
          Length = 266

 Score =  250 bits (639), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 5/240 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G+ ARAM   GLT L LVNP    P+ +A+A +AGA++V+  A +   
Sbjct: 25  VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNEE 124
             EA+A    V  T+AR R +   ++ PR       A  AA   V ++FG ER GL N++
Sbjct: 85  TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      +++  NP +SSLNLA AV ++AYE  M     +E        ++P    ++L 
Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEWWMEAAQAEEF--YTHTGQSPPATKEELH 202

Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
             + HLE  L  TGF    +    ++  +R    RA    QE+    GI+A++  + K  
Sbjct: 203 NLFDHLEGELDQTGFYTHPDKKPSMVRNVRNTLQRAHMTEQEVRTFHGIIAALVGRKKQR 262


>UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria
           cinerea ATCC 14685 RepID=D0W0D7_NEICI
          Length = 330

 Score =  249 bits (637), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 25/260 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV------------KPD------ 43
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P +             P+      
Sbjct: 71  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130

Query: 44  --SQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+   + +
Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVPELL 190

Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             A     V LVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+    
Sbjct: 191 QAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 250

Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220
            +   + +Q +H        + ++    H+E  +   GF    +  ++M +++ LF RA 
Sbjct: 251 DSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 306

Query: 221 PESQELNILRGILASIEQQN 240
            ++++++ILRG   ++  + 
Sbjct: 307 TQTEDIDILRGFFNTVSHRI 326


>UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae
           RepID=Q2P2B7_XANOM
          Length = 254

 Score =  248 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 109/240 (45%), Positives = 141/240 (58%), Gaps = 4/240 (1%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IR VLV T H GN+G+ ARAMKTMG++ L LV P    D  A   +AGA DV+  A I  
Sbjct: 7   IRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPIFA 66

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNE 123
           TL EA+A C+LV+G +AR+R +    L P E   +++A+A+    VA VFGRER GLTN+
Sbjct: 67  TLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLTND 126

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLV 180
           ELQ CH  V I ++P++SSLNLA AVQV+AYEVR+A LA  E                  
Sbjct: 127 ELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPASH 186

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE  +G L  TL    F +   P   M KLRRL  RA    QE+ ++RGIL+  ++  
Sbjct: 187 AQLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQRMA 246


>UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata
           obscuriglobus UQM 2246 RepID=UPI00016C4014
          Length = 269

 Score =  247 bits (632), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 12/254 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59
           +L   R+VLV   + GN+G+ AR M+  GL++L LV P     D  A  +A     V+  
Sbjct: 4   LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63

Query: 60  AHIVDTLDEALAGCSLVVGTSA------RSRTLPWPMLDPRECGLKSVAEAANTPVALVF 113
           A +V  L +AL+ C   + TS+      RS T+        E   + +A A   PVA+VF
Sbjct: 64  ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIG----TAAEQMPELLAAAEAGPVAVVF 119

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE-QVEH 172
           G E  GL+NEE+ +CH  V + ++P   SLNLA AV +  YE R AW     +   + E 
Sbjct: 120 GPEPHGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEI 179

Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
            E       D +R + HL   L   G++       +M+ +R+L  RA P  QE+ IL G+
Sbjct: 180 PERAVAPFADQDRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHGL 239

Query: 233 LASIEQQNKGNKAE 246
              +   ++  K +
Sbjct: 240 ARQLLWASRQMKRD 253


>UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria
           RepID=Q2RWJ5_RHORT
          Length = 279

 Score =  246 bits (630), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 118/238 (49%), Gaps = 5/238 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD 64
            IVLV      N+G VARAM   GLT L LV P       +AIA A+GA  ++  A   +
Sbjct: 19  AIVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFE 78

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
           T + A+A  + V  T+AR R +   +L PR    +   + AA    A++FG ER GL+N+
Sbjct: 79  TTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSND 138

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++      V +  NP Y SLNLA AV ++ YE   A  AT    EQ+   +T      +L
Sbjct: 139 DVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQAGDAT--PAEQLVTNDTQPATRGEL 196

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQN 240
             F+ HLE+ L   GF+R       M   LR LF RA    QE+  L G++  +    
Sbjct: 197 LGFFDHLERELDDCGFLRNAAKRPGMVRNLRNLFERADLTEQEIRTLHGVVKELRHGR 254


>UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota
           RepID=Q0W2E0_UNCMA
          Length = 249

 Score =  246 bits (629), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 20/239 (8%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE +  GN+GSV RAMK  G  +L LV P    +S A A+A+ A D++ +A IV
Sbjct: 8   HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPCELGNS-AKAMASHAQDLLASAAIV 66

Query: 64  DTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           DT++EAL G S++VGT+ +        +  P   PRE  LK++ E     VAL+FG+E  
Sbjct: 67  DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NE L+KC   ++I  + +Y  +NL+ AV V+ YE+             ++  +    
Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-----------ADIKGNDFLLA 173

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             +  E  Y H+EQ L +  +       +    +RR+  RA    +E   L G++  I+
Sbjct: 174 DSEMQEILYQHVEQLLDSINYADYKK-DKTSLMIRRIIGRAMISPREYFTLMGLIRDIQ 231


>UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ
          Length = 250

 Score =  246 bits (629), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 132/238 (55%), Gaps = 6/238 (2%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAH 61
           +R VLVETSH GN+GS ARA+KTMG  +L LVNP        ++AIALA+GA DV+  A 
Sbjct: 9   LRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLETAT 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGL 120
           +  +L++A+  CSLV+G ++R R    P LD      L S   A    VA+VFG ER GL
Sbjct: 69  VSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERTGL 128

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NE L  C + V + ANP+Y SLNLA A+ V AY +R  +    +               
Sbjct: 129 ENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVDFA 188

Query: 181 D--DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           D   +     H  + L A G++   HP ++M + + LF R+R   +E+++LRGI   +
Sbjct: 189 DPIAVAAMLEHWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRGIAKQM 246


>UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira
           thiodismutans ASO3-1 RepID=C0GN85_9DELT
          Length = 252

 Score =  245 bits (625), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 4/242 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60
           + NI ++L    ++ N+GSVARA   MG + L +         +A  LA +  ++++ + 
Sbjct: 1   MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVG 119
                L++AL G   V  TSAR       +  P +   + +  E  +   ALVFG E  G
Sbjct: 61  EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRPETLDQDTALVFGPEDKG 120

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L N E++ C   ++I    +  SLNL+ AV ++ YE      A +     +   ++P   
Sbjct: 121 LANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFKHVPAARTRH--IPSWDSPPVT 178

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            + ++  + ++++TLL   F++ ++P   M  L+R   +      E N+L GI   I+  
Sbjct: 179 QEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLMGICRQIKWM 238

Query: 240 NK 241
             
Sbjct: 239 AG 240


>UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L7Y7_MAGSM
          Length = 258

 Score =  244 bits (623), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 3/232 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
            +L   SH GN+G+  RA+  MG  +L LV P   P     A AAG +  I    + D+L
Sbjct: 15  FILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQVFDSL 74

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS--VAEAANTPVALVFGRERVGLTNEE 124
           D A A  + +V  + R R     ++ PRE G++     + A++ V ++FG ER GL   +
Sbjct: 75  DAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTGLETAD 134

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +++CH+   I  + E  SLNL+ AV ++AYE+ +     +      + ++      D++ 
Sbjct: 135 VERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLGQGLGEVPVHDPQRDDA-LASQDEMV 193

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           RF+ HL+  L+   FI+ +   Q+M  L+ LF RA  + +E+ ILRGIL  +
Sbjct: 194 RFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEV 245


>UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus
           RepID=Q1IWV0_DEIGD
          Length = 254

 Score =  244 bits (623), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62
           N+ +VLV     GN+G+ ARAM  MG ++L +V P   P DSQA+A+A  A+D++ +A I
Sbjct: 2   NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             TL EALA   L VGT+AR R    P   P +      A +A    ALVFG E  GL N
Sbjct: 62  YPTLREALADRDLSVGTTARLRADLPPPRHPAQVRPLVRAASAP---ALVFGPEETGLVN 118

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
            +L++C   V +    EY+SLNLA AV ++ YE   A   T     +    +T     ++
Sbjct: 119 SDLEQCQVTVRVPTA-EYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKT--ATREE 175

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           +E  YGHL +T+   G+         +   R +  RA   S E  + RG L  +  + + 
Sbjct: 176 MEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQVRWKVED 235


>UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon
           RepID=D1JIN9_9ARCH
          Length = 234

 Score =  243 bits (622), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 20/242 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +RI+LVE     N+G+VAR  K  G ++L++VNP  +   +A+++AA A DV+ +  IVD
Sbjct: 3   VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNPP-EIGIKALSVAAHAYDVLQSCKIVD 61

Query: 65  TLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           +L  A+A  ++V GT+A+        L  P   P E  LK         ++++FGRE VG
Sbjct: 62  SLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGREDVG 119

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L N+EL+ C   V+I  +PEY  +NL+ AV VI YE+      T E              
Sbjct: 120 LLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLE-----------LAP 168

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           V+D ER Y  L+  L   G+ RE+   + +  LRR+  RA   ++EL  L+GI+   E +
Sbjct: 169 VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAEWR 227

Query: 240 NK 241
             
Sbjct: 228 IG 229


>UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter
           asiaticus str. psy62 RepID=C6XG74_LIBAP
          Length = 268

 Score =  243 bits (621), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 6/241 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           I+LV+     N+G VARAM    LT L LVNP    P  +A + +A A  VI +  +   
Sbjct: 17  IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124
           L EA+A    +  T+AR+R     +L P+E  +       +   V ++FGRER GLTNEE
Sbjct: 77  LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEE 136

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   +  ++   NP + SLN++ AV ++ +E     + + E   +   E+       +L 
Sbjct: 137 IALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSEKNVK---EQNTPATKGELL 193

Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            F  +LE +L   G+ R      ++++ L  +F R     +E+ +LRGI++++++ ++ +
Sbjct: 194 SFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQS 253

Query: 244 K 244
            
Sbjct: 254 S 254


>UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X0D5_DESRD
          Length = 256

 Score =  243 bits (621), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 4/248 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59
           +L N+ +VL +     N+GS ARA   +G  NL LV P      +A  LA G   +V+ +
Sbjct: 7   LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERV 118
             +   L  AL+    V GT+AR+      +  P +       + AA   VA+VFG E  
Sbjct: 67  LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NEE+  C   + I    E +SLNL+ AV ++ YE   A  ++ +   +    ++   
Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYEWFKA--SSGKRFLRTTPPQSRLC 184

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             ++ E     +++ LL   F ++++    M  +RR F R      E N+L GI   ++ 
Sbjct: 185 THEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQVKW 244

Query: 239 QNKGNKAE 246
                  +
Sbjct: 245 LATRTDTD 252


>UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales
           RepID=B7KUQ9_METC4
          Length = 245

 Score =  242 bits (619), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 4/237 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G  ARAM   GL+ L LV P    P       A+GA+ V+  A +  T
Sbjct: 6   VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNEE 124
           L EA+A    ++ T+AR R     +  P +     +        V L+FGRERVGL+N+E
Sbjct: 66  LPEAIADLHFLLATTARERGQMKRVFAPEDAMAATAERIGRGERVGLMFGRERVGLSNDE 125

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      V      E+ SLNLA AV ++ YE R A  A            +P    + + 
Sbjct: 126 VSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRA--AGLATLRFSGEMLSPPATREAML 183

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
             +  LE+TL   GF        +   +R +  R     Q++   RG L ++ ++ +
Sbjct: 184 SLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKAR 240


>UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae
           RepID=A1VM17_POLNA
          Length = 311

 Score =  239 bits (610), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 131/259 (50%), Gaps = 22/259 (8%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNA 60
             R +L+ TSH GN+G+ ARAMKTMG  +L LV P    V    + I  A+GA DV+ NA
Sbjct: 38  KTRFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNA 97

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------------ECGLKSVAEA 104
            IV+TLDEAL G + +  T+   R    P   PR                E G       
Sbjct: 98  RIVETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQ 157

Query: 105 ANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164
               VA +FG ER G+ NE++ +CH  ++I  +P++ SLNL  AVQ+IAY+ R A     
Sbjct: 158 RPDSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF- 216

Query: 165 ENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224
             G Q   EE        +     H E+ L+  GF+    P ++M +L +LF RA+   +
Sbjct: 217 --GIQAAIEEPRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSPE 274

Query: 225 ELNILRGILASIEQQNKGN 243
           E++ILRG+  ++ +     
Sbjct: 275 EIHILRGVAKAMMRHAPDK 293


>UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VSH2_9PROT
          Length = 293

 Score =  238 bits (607), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 6/242 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LV      N+G+ ARAM   GL  L LV P    P++ A A+AAGA++V+    +  T
Sbjct: 41  VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEE 124
           + EA+A C  VV T+AR R +  P+  P +   +    AA     A++FG E+ GL  EE
Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   H  V I  NP + SLNLA AV V+AYE   A  A        + +        + E
Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYEWAQAAGAAPLFTSPYQED---PATQAERE 217

Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           + + HL   L   G+   +H  +V+ + LR L   A     EL +L G++   E+     
Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERHLPEK 277

Query: 244 KA 245
             
Sbjct: 278 SQ 279


>UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus
           RepID=Q31MT7_SYNE7
          Length = 245

 Score =  236 bits (604), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 10/238 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63
           +RIVLVE +   N+G++AR M   GL++  +V P       +A  +A  A+ ++  A +V
Sbjct: 3   LRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVLV 62

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L  AL GC  V  T+ +      P+  P +     +      P AL+FGRE  GL   
Sbjct: 63  DNLPSALEGCQWVAATTGQRDLRDLPLESPTQ----ILPWLRQGPAALIFGREDSGLQRS 118

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL     ++    +P Y SLNLA AV +  Y    A L+  ++    + E +P  +    
Sbjct: 119 ELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYH--YACLSEADSRGVPQQESSPAAVRAAF 176

Query: 184 ERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           E+ +G+   LE  LL  G++  +     M K+R +  R+   ++E+ +LRG++  +  
Sbjct: 177 EQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQLNW 234


>UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans
           DSM 12444 RepID=Q2G643_NOVAD
          Length = 251

 Score =  232 bits (593), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 8/242 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           IVLV      N+G  ARAM   GL  + LV+P    P+  A   AAGA  V+  A +  T
Sbjct: 13  IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L EA+A CS V  T+ R R +  P+L P +     V  +A+   A++FG ER GL  +++
Sbjct: 73  LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIV--SASGRSAIIFGPERSGLETDDV 130

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
                 V +  NPE+ SLNLA AV + AYE        Q   E +     P    ++ E 
Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDM----LPPAPQEEFEG 186

Query: 186 FYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
            +  L   L   G+             LR + T+      E+  +RG+L+++ ++     
Sbjct: 187 MFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRRKPGSRP 246

Query: 245 AE 246
            +
Sbjct: 247 GD 248


>UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus
           RepID=B5IRU8_9EURY
          Length = 245

 Score =  231 bits (590), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 10/243 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            + ++LVE  +  N+G VARAMK   +  L LVNP  +   +A   A  A DV+ NA IV
Sbjct: 2   KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNPP-ELRGEAYKFAMHAKDVLENAKIV 60

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDP---RECGLKSVAEAANTPVALVFGRERVGL 120
            T+DEAL    + VGT+  S  +  P   P    E   +  A      + + FGRE  GL
Sbjct: 61  KTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAKR--AFLYGGKIGIFFGRESKGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +NEEL+K  + V I  + EY  +NL+ AV V+ YE+    +  + + E+  H        
Sbjct: 119 SNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRH--LRKATR 176

Query: 181 DDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILA-SIEQ 238
           ++ +    +  + L    +             LRR+  R+   ++E+  L G L  +IE+
Sbjct: 177 EEKDILVKYWSELLETLNYPKDPIRRKYFTIMLRRVIGRSFIYAREIYSLYGPLRLAIEK 236

Query: 239 QNK 241
             +
Sbjct: 237 IKR 239


>UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii
           ATCC 17100 RepID=D2LIP4_RHOVA
          Length = 263

 Score =  231 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 11/245 (4%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LVE     N+G+ ARAM   GL  L LV P    P+  A A AA A +++  A +  
Sbjct: 11  AIILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYP 70

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNE 123
            L  A+A    +V T+ARSR L  P+L P     +    +AA+    ++FG+ER GL N 
Sbjct: 71  DLATAVADLHYIVATTARSRFLAKPVLAPDTAVTEIAERQAADLRCGVLFGKERTGLENS 130

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175
           ++      +    +P ++SLNLA +V + AYE R           L     G     + +
Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190

Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILA 234
                 +L  FY HLE  L   GF+      + M N +R +F R  P  QE+  LRG++A
Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250

Query: 235 SIEQQ 239
            + + 
Sbjct: 251 ILRRG 255


>UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus
           profundus DSM 5631 RepID=D2RG27_ARCPR
          Length = 234

 Score =  231 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 23/247 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I + LV      N+G VAR MK  G   L+L N  V   + +   A+ A D++ NA ++ 
Sbjct: 2   ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYNCKV--TTVSFKTASHARDILRNAVVLR 59

Query: 65  TLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             D+ L   +++VGT+  +     R +  P+  P E   ++  E     +A+ FGRE  G
Sbjct: 60  KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEEF--RNFLEGKKGEIAVAFGREDYG 117

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL+ CH  V++  NPEY  +N++ AV VI YE+            +   E+     
Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYELSKG---------KYGLEDKTIVT 168

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI----LAS 235
             ++E+   + E+ +L T + R +   +    LRR+  R+    +EL +L GI    L  
Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227

Query: 236 IEQQNKG 242
           I+   KG
Sbjct: 228 IQHLKKG 234


>UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio
           alkaliphilus AHT2 RepID=C8R186_9DELT
          Length = 304

 Score =  230 bits (588), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 103/238 (43%), Gaps = 4/238 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDT 65
           IVL       N+GS AR    MG+ +L +V        + +  A   A+ +I       T
Sbjct: 19  IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           + EALA    V+ TSAR          PR     ++   A   VAL+FG E  GLTNE+L
Sbjct: 79  VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
             CH    I    ++SSLNLA AV V+ YE+  A    Q     V         V +LE 
Sbjct: 139 YLCHQLTTIPTA-DFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195

Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            YGH+EQ L   GF+R       M  +R L  R    ++E  ++RG        +   
Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGFCRQFLWYDAQR 253


>UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms
           RepID=A5GRX6_SYNR3
          Length = 248

 Score =  229 bits (585), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 7/244 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59
           M  ++ +VLVE S   N+GSVAR     G+ +L LV P   P D QA  +A    + +  
Sbjct: 1   MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERV 118
             +  +L++A+A C  VV  S R        L P+      +  +     VALVFGRE  
Sbjct: 61  CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQPALQWLLEPKPGPNHVALVFGREDH 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQENGEQVEHEETPY 177
           GL + EL      + I  +  Y SLNL+ AV +   E  R+A +      +       P 
Sbjct: 121 GLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS----SPPL 176

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           P    LE      E+ LL  GF+  +     M KLR+L  R+ P   E+ +LRG++  + 
Sbjct: 177 PAHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMVRQLR 236

Query: 238 QQNK 241
             ++
Sbjct: 237 WASR 240


>UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC
           49814 RepID=C6XNM7_HIRBI
          Length = 253

 Score =  229 bits (585), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 5/243 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LV      N+G+ AR M   GL +L ++NP    P+ +A  ++AGA +    A + D
Sbjct: 11  AIILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFD 70

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           TL+  LA  + V+ T+AR R +  P+ +  E G+ ++    +  V ++FG E+ GL NE+
Sbjct: 71  TLEAGLADLTYVLATTARPRGMEKPVFNAEE-GIGALMSRPDVGVGVMFGAEKAGLLNED 129

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      +    +  +SSLNLA AV V A+      L  +   E     ++     + L 
Sbjct: 130 VALADGILTYPVDRSFSSLNLAQAVGVFAHSWAARTLEGEAKKEFAGVGDS--ADREQLV 187

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           R + H E  L   GF        VM   LR  F RA+  +QE+   RG + ++       
Sbjct: 188 RMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKALALGRGKA 247

Query: 244 KAE 246
           + +
Sbjct: 248 RID 250


>UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K0P2_DESAC
          Length = 243

 Score =  229 bits (585), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VLVE    GN+G+V RAM   G+  L LV       S A+  + GA  ++G A     L
Sbjct: 8   VVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPDL 67

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
             ALA     V  + R+  L   +L   E   +  + AA + VA VFGRE  GLT +E+ 
Sbjct: 68  AAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEVA 127

Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERF 186
            C     I    E  SLNLA AV V  YE+           ++V   +   P  D  E  
Sbjct: 128 LCSQAATIETTDETGSLNLAQAVVVTLYELSR-------RQDRVGIVQRDQPTHDQFEPL 180

Query: 187 YGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           +  L++ +   G++  + P  +   LRRL  +A P+  ELN LRG++  + +
Sbjct: 181 FQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLINRLSE 232


>UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus
           RepID=Q46JZ1_PROMT
          Length = 245

 Score =  229 bits (584), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 4/241 (1%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63
           ++++LVE +   N+GSVAR  +   +  L LV+P       +A  +A     ++  A + 
Sbjct: 7   LKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAKVY 66

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L+ AL+ CS ++ T  R      P+   ++     +       +ALVFGRE  GL+NE
Sbjct: 67  EDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSEREDTIALVFGREDRGLSNE 126

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL K +  +++  + +Y SLNL+ AV ++ ++     L   +  ++     +P  L+  L
Sbjct: 127 ELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQ--LNDLDLLKRHTKISSPANLIK-L 183

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           E         LL  GF+ ++     M K+++L  R   +  E+ ++RGI++    + K  
Sbjct: 184 EDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIISQARWKIKNK 243

Query: 244 K 244
            
Sbjct: 244 S 244


>UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12
           Tax=Methanococcales RepID=Y1476_METJA
          Length = 230

 Score =  228 bits (582), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 10/237 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  I ++LV   ++GN+GS+AR M   G   L +V      +++A  +A  A +++ NA
Sbjct: 1   MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTS-ARS--RTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
              +T DEA+     V+ TS AR   R L    + P+E   K +    N  + +VFGRE 
Sbjct: 61  KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEVKGN--IGIVFGRED 118

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL NEE+ KC   V+I  + +Y  +NL+ AV VI YE+      T++   +        
Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEIY-----TKKVRNKFLDINMRE 173

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
              +D E       + +     I E+         +RL  RA    +E   L     
Sbjct: 174 ASKEDKELLIRKFNEFIDKNEKIPEHKKELCKIIFKRLVNRAFISGKEAWTLMSAFK 230


>UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739
           RepID=C6A381_THESM
          Length = 246

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62
            ++++LVE  +  N+G++AR MK  G+T+L LVNP V P+++ A   A  A D++ NA I
Sbjct: 2   KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERVG 119
            ++L+EAL    L +GTS  +     P    + P E   +      +  + LVFGRE  G
Sbjct: 62  HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRL--SIYDGEIGLVFGRESRG 119

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL+K  + V I  + EY  +NL+ AV VI YEV    L       +    ++    
Sbjct: 120 LDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKS---T 176

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQ 238
             + E       + L    + ++    +  +   +R   R    ++E++ L G L    +
Sbjct: 177 RQEREMLVEFWAKFLDTLEYPKDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRRAIK 236

Query: 239 QNKGNKAE 246
             +  K +
Sbjct: 237 LLERCKND 244


>UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus
           placidus DSM 10642 RepID=C8S7Y1_FERPL
          Length = 230

 Score =  226 bits (577), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 26/246 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G   L L N       ++   AA A DV+  A  V+
Sbjct: 2   IEVVLVELKIPENIGFIARVMKNFGFEKLVLYN--CNVSKESYITAAHAKDVLDKAVKVE 59

Query: 65  TLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
            L E L   +LVVGT+        R +  P   P E     + E      A++FGRE  G
Sbjct: 60  NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEE-----LREMIKGETAILFGREDYG 114

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L +EEL+ C+  V++  + EY  +N++ A  VI YE+            + E E+     
Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSKG---------KFEFEKEEIAT 165

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS---- 235
             D++R   + E+ + +  F  E+  G++   L+R F RA     E++ + GI+      
Sbjct: 166 QKDVDRLVEYFEKLMKSIWF-PEHRIGRMKVVLKRAFGRAALTKYEVDAISGIIRKTLLY 224

Query: 236 IEQQNK 241
           +E+  K
Sbjct: 225 LEELKK 230


>UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5
           Tax=Methanomicrobiales RepID=A7I6L8_METB6
          Length = 261

 Score =  226 bits (576), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 29/247 (11%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +  I IVLV   + GN+G  AR MK  G T L LV+P      +A   A+ A DV+GNA 
Sbjct: 1   MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDP-CPLGEEAKGRASHAQDVLGNAE 59

Query: 62  IVDTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           I  T+++  A  S+VV T+ +        +  P   PRE  L+     A   V+++FGRE
Sbjct: 60  IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRE--LRERIGIAEGRVSILFGRE 116

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL N+E+++      I  + EY  +NL+ AV ++ YE+             +      
Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYEL-----------ANLPSAPYR 165

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHP----GQVMNKLRRLFTRARPESQELNILRGI 232
                ++   Y H+++ L +      +HP       M  +RR+  RA   S+E + + G+
Sbjct: 166 LATPYEMGHLYRHIDRFLDSV-----HHPAFKRENTMIMIRRILGRACLTSREASTVHGL 220

Query: 233 LASIEQQ 239
           L   E  
Sbjct: 221 LRRTEWH 227


>UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria
           RepID=B8EQU7_METSB
          Length = 281

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 13/249 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK------PDSQAIALAAGASDVIGN 59
            I+LV      N+G  ARAM   GL++L LV+P             A A AAGA  ++  
Sbjct: 18  AIILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEG 77

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118
           A + DT +EA+A  + V  T+AR R    P+L P E     ++A A      ++FG ER 
Sbjct: 78  AKLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERT 137

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+N+E+      +    NP Y+SLNLA AV +I YE   A  +T+     V    +P  
Sbjct: 138 GLSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYEWMRA--STEAKAPFVADPRSPPA 195

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASIE 237
             + +  F+ +LE  L   GF R      VM + ++ +F R    +Q+++ LRG   +I 
Sbjct: 196 PREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRG---AIV 252

Query: 238 QQNKGNKAE 246
           +  +G +AE
Sbjct: 253 RLVEGPRAE 261


>UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27
           RepID=C1A9A6_GEMAT
          Length = 283

 Score =  225 bits (573), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 6/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  + +VL E+  + N+G V RAMK MG+ +L L+ P     ++   +A    D++   
Sbjct: 5   ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              +T+DEALA C  VVG S R +   W    PR   +  +  A    VA++FGRE  GL
Sbjct: 65  QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NE L + +    I     + SLN+A A  +  YE+ M      +      H     P  
Sbjct: 125 PNEALDRSNAICTIPTTEHF-SLNVAQACLLALYELHMLAGDATKRLPPPRHA-AGSPSK 182

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG----ILASI 236
           DD+ER +  +   L A  +    +   +M   R L  RA P+ +EL ++R     +L +I
Sbjct: 183 DDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTASIEVLRTI 242

Query: 237 EQQNKG 242
           E++ + 
Sbjct: 243 ERETRQ 248


>UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY
          Length = 243

 Score =  225 bits (573), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 21/241 (8%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I IV VE   TGN+G +AR M   G  NL LVNP  + D  A   +  A  +I NA 
Sbjct: 8   FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNPP-ELDEDAYRFSKHARYIIENAE 66

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPM----LDPRECGLKSVAEAANTPVALVFGRER 117
           I++  +E       +V TS  S   P       L PRE   K    + N  + +VFGRE 
Sbjct: 67  ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWNFSGN--IGIVFGREN 124

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL NEE++KC   + I  + EY  +N+  A  +I YE+ M            + EE   
Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFME-----------KREEEGM 173

Query: 178 PLVDDLER--FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           PL ++ E         + L    F   +         RR+  RA     E + + G++  
Sbjct: 174 PLAEEFESNLLNERFSELLGLINFPD-HKRKNTEVMFRRIIGRAMLTKWEYHSMMGVMKR 232

Query: 236 I 236
           I
Sbjct: 233 I 233


>UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae
           RepID=Q0AQY2_MARMM
          Length = 249

 Score =  225 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 9/234 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
             +L       N+G+ AR M   GL  L +V+P    P+ +A+ ++AG S V+GNA +  
Sbjct: 9   AFILHTPQLGENIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEY 67

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
            L +A+   + +  T+AR R +  P++  RE      A   A   VA++FG E+ GL NE
Sbjct: 68  RLGDAIHDTTRLYATTARPRGMEKPVMTAREAVSDMKAAIEAGEKVAVMFGGEKSGLPNE 127

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
            +      + +  +  +SSLNLA AV VIAYE      A  E         +     +DL
Sbjct: 128 AVNMADVIITLPVDRSFSSLNLAQAVAVIAYEWTAGEGAPAEF-----EPVSDVAKREDL 182

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASI 236
           ER + H E  L   GF        +M   LR  F R R   QE+   RG + ++
Sbjct: 183 ERMFEHFETELERAGFFHPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKAL 236


>UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5
          Length = 233

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 12/235 (5%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           I+L+      N+G+ ARAMK  GL  L +V P    P+ QA + A GA ++I +A I D+
Sbjct: 8   IILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKIFDS 67

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L++++     +  T+   R +    +  +   L       +  V ++FGRE  GL+NEE+
Sbjct: 68  LEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLD---YPNSEKVGIMFGRENNGLSNEEI 124

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
              +  + I    ++SSLN+A AV +I YE+       ++      H        +++E 
Sbjct: 125 AFANKIITINTT-KFSSLNIAQAVIIICYELFRNSTPRED-----VHNIQKLATKEEIEH 178

Query: 186 FYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQ 238
           F  +L   L   GF +  +    +   +  +FTR     S E+  L+GI+ S+ Q
Sbjct: 179 FLVNLFGKLDKAGFFKAPDKKPAMQQNITNIFTRINSLSSPEVQTLQGIIKSLNQ 233


>UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus
           RepID=Q31AG9_PROM9
          Length = 249

 Score =  223 bits (569), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 6/245 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60
             N++++LVE +   N+GSVAR      +  L +V+P     S +A  +A      + + 
Sbjct: 7   FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119
            I D L+ A+  C LV+ +  R       + +  E  +  +        +A++FGRE  G
Sbjct: 67  KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINNLAIIFGREDRG 126

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+N EL   +    I  +    SLNL+ AV ++ YE+  +           E E      
Sbjct: 127 LSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNKSSKRNFNK----ELEVFNLAS 182

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
              +   +  +E+ LL  G++ E+     ++K +   +RA     E+N+LRGI+  I   
Sbjct: 183 SKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQINWF 242

Query: 240 NKGNK 244
              +K
Sbjct: 243 LNNSK 247


>UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1
           RepID=UPI000038E490
          Length = 236

 Score =  222 bits (566), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 14/234 (5%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   G+++L +V      +++AI  +     ++ NA I +
Sbjct: 8   ISVVLVEPKYQGNIGAVARSMANSGISDLRIV--KTPIETEAIYRSMHGRYILDNAKIFN 65

Query: 65  TLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +L EA++G  ++ GTS  S+           P E    S        VALVFGRE  GL 
Sbjct: 66  SLKEAVSGFEIIAGTSDISKSGEKFRRVPTGPEEFW--STNGLTGQKVALVFGREDNGLN 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            EEL  C++ + I  NPEY   NL+ AV +I YE+  A          + H+      +D
Sbjct: 124 YEELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEMIKA---NYSGNATITHDLIGRDKID 180

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
            L      LE+ L    +  E     +MN L R+  RA     E   + GI+  
Sbjct: 181 TLAG---RLEELLAKIDY-NEQEIDTLMNMLNRIIARANITDSEFFKIMGIMRQ 230


>UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA
          Length = 234

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 25/248 (10%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE  + GN+G VAR MK  G+  L+LV P  +    AIA A  A D++ NA IV
Sbjct: 2   DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61

Query: 64  DTLDEALAGCSLVVGTS-------ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           +TL+EA+      + T+       AR+  +PW + +         A +    +A+VFG E
Sbjct: 62  NTLEEAIEDVEAAIATTAVLASTPARNPMMPWEVRE---------AFSDYEKIAVVFGPE 112

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL   E++ C   + I  + EY S+NL+ +V V+ YE++          E V      
Sbjct: 113 DRGLRTWEVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKM--------EYVPERYGR 164

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
                + E     L+  + A  F        V    RR   RAR   +E+  L  I    
Sbjct: 165 AATKREKEVLVKSLDDLMKALNF-DSTRRENVCTTFRRFLARARCTDKEIKALLWIFEKA 223

Query: 237 EQQNKGNK 244
           +++  G K
Sbjct: 224 KRRVLGVK 231


>UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae
           RepID=Q1QMV4_NITHX
          Length = 410

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 5/241 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++LVE     N+G  ARAM    LT L +VNP    P+  A   AAGA  ++ +  + D
Sbjct: 17  TVILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFD 76

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
           T++ A+A C+L++ T+AR+     P++ P     ++  + AA   V ++FGRER GL NE
Sbjct: 77  TVEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNE 136

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      +    NP ++SLNLA AV ++ YE     L T+        E +       +
Sbjct: 137 EVAMADRIITYPVNPGFASLNLAQAVLLMGYEWFK--LVTRAALPFAMPERSERASQHQM 194

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKG 242
           + F+ +L   L    F+R       M   LR +FTR  P  Q+++ L G++ +I +  KG
Sbjct: 195 QAFFDNLVSELDKVEFLRPAEKRDTMLVNLRNIFTRMEPTKQDMHTLHGVVMAIAEGRKG 254

Query: 243 N 243
            
Sbjct: 255 P 255


>UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus
           RepID=C5A3L4_THEGJ
          Length = 243

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 11/237 (4%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            +VLVE     N+G VAR MK  G + L LVNP +    ++ + A  A DV+ NA IV+T
Sbjct: 13  SVVLVEPEGPANIGMVARTMKNFGFSRLVLVNPNL--SEESYSYAVHARDVLKNATIVET 70

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            +EAL    L VGT+ +          P     L+   +     V L FGRE +GL NEE
Sbjct: 71  FEEALELFDLTVGTTGKPGRRFISYRAPLYPWELRETLKGYTGEVGLFFGRESIGLKNEE 130

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L++    V I  + +Y  +NLA AV VI YE+            +   E       D+ E
Sbjct: 131 LERLDLIVTIPTSEDYPVMNLAQAVAVILYELSKT-------RPEPSVEALKPATRDEKE 183

Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
                  + L    +   E      +   R+   +A    +E++ L G L    ++ 
Sbjct: 184 ALVRVWAELLKVLEYPKDEERREVFVKVFRKAVGKAFLYGREVHTLIGPLRRAVKRL 240


>UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter
           RepID=Q4FLI9_PELUB
          Length = 237

 Score =  219 bits (558), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 8/240 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60
             NI  +L +   + N+G+ ARA+K      L +V P  + P+ + +A + GA D+I NA
Sbjct: 3   FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + +TL+ A+     VV TSAR R      ++  +          N  +A +FG E  GL
Sbjct: 63  KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD----LKKIDFNKKIAFLFGSEASGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N E+   +Y + I  NP++ SLNL+ +V +IA+ V  A +   +  +  + ++      
Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQ 239
            D++       + L    F +      +M   LR +F++     +E  IL  + AS+ ++
Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLENLRSIFSKMELSEKETRILSSVFASLSKK 236


>UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F137_ACIC5
          Length = 240

 Score =  218 bits (556), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 7/236 (2%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLV T +  N+G+ ARAM   G  +L +V P      +A + A GA+ ++ +A    
Sbjct: 10  IAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEARS-AVGAASILASARECS 68

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           TL +A+A C+ V+GTSA     P   +      L  +A+     +ALVFG+E+ GLTN +
Sbjct: 69  TLADAVADCTCVLGTSAIGDRQPLQPIVDLPAALPWLAQRVAGRIALVFGQEKHGLTNHD 128

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L  C   + I   PE +S+NL  AV V  YE   +  A          E        DLE
Sbjct: 129 LSHCDAILRIPTLPEQASMNLGQAVAVCLYEFARSGHAPT------ATEAPKAAPAADLE 182

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           R    L + L  +G+I+       + + R L  R     ++ ++L G+LA IE++ 
Sbjct: 183 RLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERKL 238


>UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY
          Length = 235

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 12/242 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G + L L+NP +    ++ A A  A DV+ NA I+D
Sbjct: 2   ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPNL--TEESYAYAVHARDVLENALILD 59

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + ++AL      VGT+ +      P   P     L  + +     V + FGRE +GL NE
Sbjct: 60  SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELVGLIKDYPGEVGIFFGRESIGLKNE 119

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL      + I  + EY  +NLA A  V+ YE+            +   E       ++ 
Sbjct: 120 ELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYELSK-------KRPEPYVEALKPATREEK 172

Query: 184 ERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILA-SIEQQNK 241
           E      E+ L    + ++       +   +R   RA    +E++ L G L  ++++  +
Sbjct: 173 EALVRTWEKLLNTLDYPKDAERRDVFVKVFQRAVGRAFLYGREVHTLIGPLRKALKRLEE 232

Query: 242 GN 243
             
Sbjct: 233 CR 234


>UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae
           RepID=A5UK71_METS3
          Length = 301

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            NI IV VE    GN+G +AR M   GL NL L+NP      +A   A     ++ NA I
Sbjct: 68  NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPT-LTPEAFYQATHGKYIVDNAKI 126

Query: 63  VDTLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             TLDE          V ++  +         P            N   A++FGRE  GL
Sbjct: 127 YHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLGKNINTNNKTAILFGREGNGL 186

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEE++ C   V+I  +P Y  LN++ A  +I YE+            +   E       
Sbjct: 187 TNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMH-------EYPVEGLEESTA 239

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            + E     +   +     I E+     +   + +  RA    +E + L+GIL  ++ + 
Sbjct: 240 IEKEYVLKDMYDLIDGLD-IPEHKKKNGLKSFKNIINRAYITGREAHTLKGILRRLKMKM 298

Query: 241 K 241
            
Sbjct: 299 G 299


>UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis
           DSM 2160 RepID=Q3IPH4_NATPD
          Length = 264

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 16/241 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGN 59
           + NI + +V     GN+G++AR+MK  GL+ L+LV+P    PD +A   A  A  DV+ N
Sbjct: 1   MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARS-----RTLPWPMLDPRECGLKSVAEAANTPVALVFG 114
           A  V+     L      V  +A +     + + +P ++P    L       +  V +VFG
Sbjct: 61  ATEVEF--SYLTEQFYTVACTATTNEDATKHVRYPFIEP--AALSDELAGLDADVCIVFG 116

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEE 174
           RERVGLTN+EL +     +I A+ +Y  LNLA A  ++ YE+R   +   ++ +Q     
Sbjct: 117 RERVGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTVEETQHPKQAHERA 176

Query: 175 TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
             +    ++E  +    + L   G   E  P       RRL  RA P  +E   LRG+L 
Sbjct: 177 DEH----EIEGLHETFSEYLHEVGHPEEKIPK-TERLFRRLAGRASPTGREARTLRGVLR 231

Query: 235 S 235
            
Sbjct: 232 R 232


>UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum
           pendens Hrk 5 RepID=A1RXM1_THEPD
          Length = 257

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 12/247 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + + + +  VE  +  N+G +AR+MK   L  L+LV P      ++   A  A+D++ NA
Sbjct: 12  LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLP-WPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
            IV +L E +    LV  T+      P    + P E    S+   +     +V GRE  G
Sbjct: 72  VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGEMA--SLFAESTGSKLVVIGREDWG 129

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ EEL  C   V I ANPEY SLN + A  ++ YE+   + + Q++ E+        P 
Sbjct: 130 LSAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLER--------PP 181

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            +++E F  HL       G+  E    +++  ++RL    R    +L IL G++    + 
Sbjct: 182 REEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLVRDSLET 240

Query: 240 NKGNKAE 246
            K    E
Sbjct: 241 IKRTHRE 247


>UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria
           RepID=Q02AK8_SOLUE
          Length = 252

 Score =  211 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 7/239 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            N+R+VLV T +  N+G+ ARAM   G + L +V P      +A + A GA+ ++  A  
Sbjct: 18  NNLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREARS-AVGAAPLLQKAEE 76

Query: 63  VDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             ++  A+A C LVVGT++   R L  P+          +      PVAL+FG E+ GL+
Sbjct: 77  FPSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLS 136

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NE+L  CH+ + I    +  S+NL  AV +  YE+     A          E+       
Sbjct: 137 NEDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYEL-----ARDPKAALASPEKIRSANAG 191

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +LE+    L + L  +G++          K+RRL  R     ++  ++ G+L  I  + 
Sbjct: 192 ELEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQILWKL 250


>UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae
           RepID=Q1D9N7_MYXXD
          Length = 240

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 89/243 (36%), Positives = 123/243 (50%), Gaps = 9/243 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  +R VL+   +  N+G+ ARA+K  GL++   V P V+    A  LA  A DV+  A
Sbjct: 1   MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              DTL+EA+A C  VVGTS+R        L PR  G + VA A   PVALVFG ER GL
Sbjct: 61  RRADTLEEAVADCVWVVGTSSRK-VEGKRRLPPRAVGEELVARAPQGPVALVFGDERSGL 119

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN E+++ H   A+   PE  S+NLA AV + AYEVR+A L                   
Sbjct: 120 TNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAMLEAAATPPGPLPA---AATD 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILRGILASIE 237
            +L +    LE  L   GF+ +  PG+    +R LF    R+R   +E  +    L S+ 
Sbjct: 177 AELAQVESTLESVLTTGGFLVDAQPGR--TAVRDLFAPLRRSRLTRKEARLWLAALHSLR 234

Query: 238 QQN 240
           ++ 
Sbjct: 235 KRQ 237


>UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIE5_9BACT
          Length = 278

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 7/234 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I ++LVE  + GN+G++AR M     ++L +V  +  P+     LA  + +++ N +
Sbjct: 7   FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKV--PEKNDFYLAMHSEEILENVN 64

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           I  TL++A+ G   V+  S R          P +   K V    ++ + LVFGRE  GLT
Sbjct: 65  IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           + E + C       ANP + SLNLA AV +  +E+       ++ G++  +         
Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYYNS----ASGK 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           +L+    ++ + +   GF +          L ++  +  P+   L  LR +   
Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMFNR 233


>UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma
           RepID=Q9HJF9_THEAC
          Length = 291

 Score =  209 bits (532), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 16/240 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+ IVLV   + GN+G+VAR+M   GL +L ++     PD +A A + G   ++ NA I
Sbjct: 49  ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGNR--PDDEAFARSMGGRFILENAEI 106

Query: 63  VDTLDEALAGCSLVVGTSAR----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            D     ++  +++  TS+      +      L P +   +   +     +ALVFGRE  
Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLPLTPEKFWEEMSDQ--GGKIALVFGREDD 164

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NEE++KC+Y + I  NPEY   NL+ AV +I Y V        EN E    E    P
Sbjct: 165 GLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIE----P 219

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             +DL     ++ + +  T +  E+        LRRL  R+R   +E   + G++  +++
Sbjct: 220 DHEDL--MLRNIIEVMRLTSY-PEHKIRNTELLLRRLIARSRMSDREYFRMMGVIRRVKE 276


>UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO
          Length = 235

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 14/230 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   GLT+L +V      D  A   A     ++ NA I +
Sbjct: 7   ISVVLVEPKYQGNIGAVARSMANSGLTDLRIV--KTPIDEDARRRAMHGLYILDNARIYN 64

Query: 65  TLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + D+A++G  ++ GTS  S+         + P               VALVFGRE  GL 
Sbjct: 65  SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFW--DNYGLNGKRVALVFGREDNGLN 122

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N EL KC++ + I  NPEY   NL+ AV +I YE+     +          E   Y   +
Sbjct: 123 NYELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEMIKRVYSGNI------IESNNYISPE 176

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                    E+ L   G+ +     ++    RR+  R+     E   + G
Sbjct: 177 HFNIMINRFEELLNLLGYEKP-KVDKLSVMARRIAARSNITDAEYFKIMG 225


>UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q8Q0_DESAH
          Length = 226

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 3/212 (1%)

Query: 26  KTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84
             MGL  L +V P     ++A   A   A+ ++    I  TL +ALA    VVGT+AR  
Sbjct: 1   MNMGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLG 60

Query: 85  TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLN 144
                +  PR   L+      N  VAL+FG E  GLTN E+  CH  + I     +SSLN
Sbjct: 61  GQRL-VESPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIPTLG-FSSLN 118

Query: 145 LAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENH 204
           LA AV ++ YE+ +A    Q    + +        V +LE  Y  L   L   G++   +
Sbjct: 119 LAQAVVIVCYELLVAVEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVNPEN 178

Query: 205 PGQVMNKLRRLFTRARPESQELNILRGILASI 236
           P   +N++R+  +R + ++ E  I++G++  I
Sbjct: 179 PDFWLNRVRQFLSRIKIQAGETGIVKGVIDRI 210


>UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae
           RepID=Q1DAL2_MYXXD
          Length = 243

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 5/236 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           + + +VL +T  T N+G+VAR M   G + L L  P++K    A  LA  +  V+    +
Sbjct: 5   EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              L EAL  C   VGT++R++     +L P E   +   E+    VALVFG E+ G+++
Sbjct: 65  TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           E+L +C   +AI  +    S+NLA +  V+ Y      L           EE P   +  
Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLT-----PTAAVEEAPGAKLGT 179

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           L      +   +L   F+    P  V+N+L +   RAR   +E  +       +E+
Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQREAELWLTAFKHLER 235


>UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DMM1_STAMF
          Length = 231

 Score =  201 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 18/240 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +R+VLV    + N+G +AR     G+  L+LV P      +A+  AA ASD +  A IVD
Sbjct: 3   VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADL-EEALRYAAKASDYLKKAIIVD 61

Query: 65  TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            L +A+    LVV T+A+      +    +  R+     + +     +A++FGRE  GLT
Sbjct: 62  DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVE--MVKGRVNRLAILFGRESTGLT 119

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            +EL+     V I ANPEY  LNL+ AV V  +E+        EN         P    D
Sbjct: 120 RKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEIWNIRGVRAENIP-------PSAGRD 172

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI----LRGILASIE 237
           ++E F   L   +     +++    ++M   +++  R+R    E  +    LR +L  +E
Sbjct: 173 EIE-FILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLGKLE 231


>UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30
           Tax=Enterobacteriaceae RepID=C9XV28_CROTZ
          Length = 239

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 102/240 (42%), Gaps = 16/240 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + I+LV  +   N+G+ ARAMKTMG T L +V      D  A  +A GA D++ N  
Sbjct: 11  LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120
             DTL  AL      V T+ARSR        P++       +AA  PV ALVFGRE  GL
Sbjct: 71  RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL        +    +Y SLNL  AV V  Y++      T            P    
Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLTALMQNTPT--------AAPQADQ 182

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQ 239
             L+     ++  L   G   +      +        R    E ++  +L  +L  IE++
Sbjct: 183 QQLKALRLRIDALLTTLGVEDDLKMADWLQ------QRLGLLEQRDTAMLHRLLHDIEKK 236


>UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus
           RepID=O28473_ARCFU
          Length = 226

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 17/237 (7%)

Query: 9   LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68
           LVE     N+G +AR  K  G+  L L    V    ++   AA A DV+ NA +V+ L E
Sbjct: 2   LVELKIPENVGFIARVAKNYGIKRLCLYKCRV--TEESYHTAANAKDVLENAVVVEDLQE 59

Query: 69  ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128
            L   +L+VGT+          L       + +   A   VA++FGRE  GL NEEL+ C
Sbjct: 60  FLQRMNLIVGTTGIPGGDYK-YLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMC 118

Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYG 188
           H  V +  + EY  +N++ A  VI Y +R           +   E+       D+E    
Sbjct: 119 HVLVRVPTSEEYPVMNVSHAAAVILYFLREI---------ERVQEDDEIATFRDIEVTLS 169

Query: 189 HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN----ILRGILASIEQQNK 241
           +L + L    +  E+   + +   RR+  RA  +  E++    I R  ++ I++ N+
Sbjct: 170 NLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNR 225


>UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae
           RepID=D2PC46_SULIS
          Length = 237

 Score =  200 bits (509), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 16/236 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IR+VLVE     N+G VAR  +   +  L++VNP     S+A   +AG  + +  A IV+
Sbjct: 2   IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
             DEA+    + + TS+ +      +L       + ++      VALVFGRE VGLT EE
Sbjct: 61  NFDEAINDVDIKIATSSIA-DNNGDILRKSIRPWELLSLIQGKKVALVFGRESVGLTREE 119

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----------AWLATQENGEQVEHEE 174
           + KC + + I ANP Y  LNL+ AV ++ YE+            + ++ Q       + E
Sbjct: 120 IFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQSIKLIDRYAE 179

Query: 175 ---TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227
                    DD  + Y  L++T++  G   E     +++ LR+L+TR     +E+N
Sbjct: 180 ILYKMLKRSDDDYKMYIALKRTIIK-GVKDEEEARVIVHFLRKLYTRIIHNEKEMN 234


>UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VNS2_ALCBS
          Length = 223

 Score =  199 bits (506), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 4/217 (1%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE +   N+G+ ARA+KTMG + L LVNP     + A  +A  ++DV+  A IV
Sbjct: 2   DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNP--GDMTAAHWVAHHSNDVLEQAMIV 59

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTN 122
           D+L +AL    L +G +AR R      +D   C      +  +   VA+VFGRE  GLT 
Sbjct: 60  DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCAALVAGKGNSVQRVAIVFGREASGLTG 119

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +EL  C    +I    +  SLNLA AV + A+E+R          +      T   +   
Sbjct: 120 DELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELRKQPAVKITEPDPATFSHTRQAVHQQ 179

Query: 183 LERFYGHLEQTLLA-TGFIRENHPGQVMNKLRRLFTR 218
           L   +    + L      +      + +  +R+L  R
Sbjct: 180 LASLHIQPNENLHQWVDELLPLANDRELGLVRQLLRR 216


>UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter
           RepID=B4UHH1_ANASK
          Length = 269

 Score =  197 bits (502), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 20/257 (7%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----------------LVKPDSQA 46
            IR+VL       N+G+ AR MK  GL+ L +V P                      ++A
Sbjct: 5   KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64

Query: 47  IALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN 106
             +A  ASD++  A I   L  A+   + V GT++R+     P L+PR    + V  +A+
Sbjct: 65  RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRA-VEGRPWLEPRGLAAELVRRSAD 123

Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
             VA+VFG ER GL++ EL+ C     I     Y S+NLA AV V+AYEV  A       
Sbjct: 124 GEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGAA 183

Query: 167 GEQVEHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224
             +            ++ +E  +   +  L A G++   +P  ++   RRL  RA P  +
Sbjct: 184 PAEAPPGRGGDAPARIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPTQR 243

Query: 225 ELNILRGILASIEQQNK 241
           E+ +L G L S+++  +
Sbjct: 244 EVELLLGALRSLDRVLR 260


>UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10
           Tax=Halobacteriaceae RepID=B9LNN3_HALLT
          Length = 290

 Score =  196 bits (500), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 113/228 (49%), Gaps = 16/228 (7%)

Query: 15  TGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGNAHIVDTLDEALAG 72
            GN+G++ARAMK  GL++L LV+P   K D +A   A  A  DV+ NA  V T DE +A 
Sbjct: 49  PGNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVAN 107

Query: 73  CSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
               VGT+A +         +P   P E  L+   +  + P A+VFGRE  GL NEEL +
Sbjct: 108 YH-TVGTTAITGEDDQSHERFPFKTPVE--LRESLKTVDAPTAIVFGREGRGLNNEELSQ 164

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFY 187
                +I A+ +Y  LNL  A  V+ YE+R   +   +  +             D+ERF+
Sbjct: 165 LDEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP----DVERFH 220

Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                 L ATG  RE+H  +    +RRL  RA P  +E++ L G    
Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTFRK 267


>UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus
           RepID=A9WAF6_CHLAA
          Length = 239

 Score =  196 bits (500), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 5/243 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + +I ++L +     N+G+V RAM   G  +L LV+P     +   A+A     V+ N  
Sbjct: 1   MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSR-TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   L EA+A    +VGTS R    LPW     +         A+  PVA++FG E  GL
Sbjct: 61  VHAHLSEAIADIRYLVGTSDRPHPGLPWRNDVRQWANETRQRAASTGPVAILFGSEGNGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + +EL  C   + +    +Y  LNLA AV ++ YE++                  P   +
Sbjct: 121 SRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQ----VTTPLAPPPPPGEPPATL 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
              E  Y  +   +  T F++      +  +LR +  RA    ++  +L  +L  + ++ 
Sbjct: 177 AARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREVLRKL 236

Query: 241 KGN 243
           +  
Sbjct: 237 ERR 239


>UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas
           RepID=A0KMM3_AERHH
          Length = 230

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLV  +   N+G+ ARAMKTMG   + LV   V  + +A  +A GA +V+  A   
Sbjct: 2   KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           DTL+EALA   LVV T+AR R      L P E   +  A+ +   VA+VFG E  GL+NE
Sbjct: 62  DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +L +      +     Y SLNL  A+ + AYE+       +   E V++          +
Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYELSQLLDEPEVLAENVDN-------AGQV 174

Query: 184 ERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQQNK 241
                   + L   G  ++    Q  M+++           ++LN+L  +   + ++  
Sbjct: 175 RVLKSKTAEILGDLGVSQDEKLHQWVMDRV------PMLPQRDLNMLHLLCKDLARKLG 227


>UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456
           RepID=A2BNA8_HYPBU
          Length = 239

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 16/242 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61
             +R+V+V      N+G +AR      +   +LV+P+  P+S +A   AA    ++    
Sbjct: 7   PRVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVI 66

Query: 62  IVDTLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +VD+L+EAL G  L V TSA+      +    + PRE   +         VA+VFGRE V
Sbjct: 67  VVDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFAEEI--APRYESVAVVFGRESV 124

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLT +EL KCH  V I ANP Y  LNL+ AV ++ YE+       ++  E          
Sbjct: 125 GLTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYELYNTRRGEKQLHE--------PA 176

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             + LER Y HL  + LA   +      QV   L+ +  R      E ++L      + +
Sbjct: 177 RGETLERIYEHL--SWLAEKLVDRERVSQVKAALKHILWRCSITGGEASMLYYFAKKLRK 234

Query: 239 QN 240
           + 
Sbjct: 235 RL 236


>UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KEG9_ELUMP
          Length = 225

 Score =  194 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 11/234 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I I+LV+  +  N+G+ ARAM   GL++L +    +    +A A A GA D++  A I D
Sbjct: 2   ITIILVKPRNPNNIGASARAMANFGLSDLRIAGAHIPNLEEAQA-AVGAEDLLKKAKIFD 60

Query: 65  TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
            L +ALA C+     TS ++R     ++                 +A+VFG E+ GL+ +
Sbjct: 61  NLQDALADCNFAFAATSLKNRNTQKEIVS----LPNINNHIKRGKIAVVFGSEKTGLSVK 116

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +++ C   + I    +  S+NLA AV ++ YE      A  +N + ++ ++T  P   D+
Sbjct: 117 DIELCDAVLNIPTTTKQPSVNLAQAVNLVCYET-----AKTKNFKTLKQQKTNLPSFKDI 171

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           +     + +      F +E         ++ +   +    ++L I++  L  ++
Sbjct: 172 DLLTADILELFDRKEFKKELTKTDRELLIKNILKSSSLSKKQLFIIKKFLNLLK 225


>UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97
           Tax=Enterobacteriaceae RepID=LAST_ECOLI
          Length = 228

 Score =  194 bits (493), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            I I+LV  +   N+G+ ARAMKTMG ++L +V+     +     +A G+ D+I N  + 
Sbjct: 2   RITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTN 122
            TL E+L      V T+ARSR        P E   L     +  +  ALVFGRE  GLTN
Sbjct: 62  PTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EEL        +    +Y SLNL  AV V  Y++  A L  Q                  
Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQL--ATLIQQPAKSDAT------ADQHQ 173

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQN 240
           L+         L       +      +        R    E ++  +L  +L  IE+  
Sbjct: 174 LQALRERAMTLLTTLAVADDIKLVDWLQ------QRLGLLEQRDTAMLHRLLHDIEKNI 226


>UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4
           Tax=Moraxellaceae RepID=Q4FSH9_PSYA2
          Length = 298

 Score =  193 bits (490), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 82/276 (29%), Positives = 130/276 (47%), Gaps = 41/276 (14%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +I++V+V T+   N+GS ARAM TMGL+ L +V P +  D+ +++ AAG SD++ +A 
Sbjct: 24  LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP------------- 108
           I  TL+ A+A C LV   S+RSR LP P++ P +     +                    
Sbjct: 84  IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143

Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
           +A++FGRE  GLTNEEL    YH+ I ANP Y  LN+A AVQVIA  +     A      
Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFIF--AYAQTHIKA 201

Query: 169 QVEHEETPYPLVDDLERF---------YGHLEQ-----------------TLLATGFIRE 202
             E    P  + D LE               ++                  ++       
Sbjct: 202 NSEANNNPLEVTDSLETLGQPMLNTYTRQQWDEPAITQQQLQQLTERTTALMVQHKLADS 261

Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            +   + ++L RL +R + + +E  ++  ++A + +
Sbjct: 262 ENLKSLPSRLSRLGSRIQLDQKEYQLISALIAKLAK 297


>UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SGQ3_9BACT
          Length = 240

 Score =  193 bits (490), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 13/241 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ + ++L       N+G +ARAM   G ++L     +      A+  A  ASD++ NA+
Sbjct: 1   MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT--PVALVFGRERVG 119
             +T +E ++   +V+G + RS      +  P E     V+E  +T   V L+FG E  G
Sbjct: 61  HPETFEELISTSDVVIGFTPRSPFSTNNL--PYEELKDFVSETVSTGLKVGLLFGNEASG 118

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L N+EL  C + V++  + +Y S+NLA AV V  ++++        + E  +  E  Y  
Sbjct: 119 LNNKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK--------DIEPDKEAEAEYAD 170

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL-ASIEQ 238
            + +      ++  L    +  + +P  +  ++R++    R   +E  ++  +   SI +
Sbjct: 171 RNTIGTLLQRIKDHLELIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFGKSISR 230

Query: 239 Q 239
            
Sbjct: 231 Y 231


>UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BT47_TERTT
          Length = 233

 Score =  189 bits (480), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 17/230 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +  +LV  +   N+G+ ARAMKTMG   L LV   +  D +A  +A GA D++ +A    
Sbjct: 2   LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L        L++GT+AR R      L P E  L S     +    LVFG E  GL+N++
Sbjct: 62  DLASLKPDFDLLIGTTARERGSARRYLSPPE--LNSQLSQQSGRSGLVFGCEASGLSNDQ 119

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L  C  +  I     Y SLNL  AV V +Y +                 E   P    ++
Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGL--------EDEAPDARQIQ 171

Query: 185 RFYGHLEQTLL-ATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
                  + L   T    E     +M  L      AR   ++L +   ++
Sbjct: 172 HLKNRAAEFLAPHTDSKTEKLSEWLMESL------ARLSDRDLRMAHQLI 215


>UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter
           aquaeolei VT8 RepID=A1U6V8_MARAV
          Length = 226

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 100/240 (41%), Gaps = 18/240 (7%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLVE     N+G+ ARA+ TMG + LWLVN  +    +A  LA G+  ++ NA I 
Sbjct: 2   KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120
             L        L++GTSA+ R       +P    L+SV       V   ALVFGRE  GL
Sbjct: 62  PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NEEL  C           Y SLNL+ AV + A+E+      +    E V  + +   L 
Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWELSGLARQSNSTPE-VASDASLGALR 178

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE     LE                     +RL        +++     +  ++E++ 
Sbjct: 179 QRLETLLPALEA---------PADSKLSQWVFQRL---PMLSERDVGFAHTLCGNLERKL 226


>UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii
           RepID=A8J9D1_CHLRE
          Length = 154

 Score =  188 bits (477), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++LVE     N+G+ ARAMK  GL +L +V P    P+  A+A ++ A+D++  A + D
Sbjct: 2   AVILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYD 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNE 123
           +++ A+A    V   +AR+R +  P +  ++    +   AA  P A L+FGRE  GLTNE
Sbjct: 62  SVEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNE 121

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           E+   +  + I ANP Y  LNLA A+  ++YE+
Sbjct: 122 EVALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154


>UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n
           RepID=B8D6J8_DESK1
          Length = 234

 Score =  187 bits (476), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 10/241 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +RIVLV      N+G +AR      +  L++V P+     +A+  AA   D +  A + D
Sbjct: 2   LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKPVASI-EEALNYAARGKDFLLKARVTD 60

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNE 123
           +LDEA+ G  +V  TS    +    +    +  G           VA++FGRE  GLT E
Sbjct: 61  SLDEAIKGVDMVAATSDEGYSAGDMLRQAVDLNGFAEKIFPRTRSVAILFGRESTGLTRE 120

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+ K    V I ANP Y +LN++ AV ++ +E+      T  N         P    + L
Sbjct: 121 EISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIP-------PLASKETL 173

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            +    L   +       E    +     RR+  +A    +E  +LR  L  + +    N
Sbjct: 174 RQLLD-LTVEISKLVMTTEEKITRSRILWRRILGKALLTEKEAALLRYWLQRVRRHISSN 232

Query: 244 K 244
           K
Sbjct: 233 K 233


>UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67P01_SYMTH
          Length = 257

 Score =  187 bits (475), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 7/203 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + +VL +     N+ ++ R M   GL++L LV P      +   +A     +I    
Sbjct: 8   LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              TL+ ALA C L +GT+ R R     +L PR      + +A    VA++FG ER GL 
Sbjct: 68  RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP----- 176
           N  L  CH  + I  +P   SLNLA A  VIAYE+ MAW    +                
Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAWTQPNDGPAHRPPAAAAPPDAT 187

Query: 177 --YPLVDDLERFYGHLEQTLLAT 197
                  + E  +  +++ L A 
Sbjct: 188 ESLATGAEREALFAAVDELLSAL 210


>UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ
          Length = 232

 Score =  185 bits (471), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 17/243 (6%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI- 62
            + +  VE     N+G++AR  K     +L+L+NP V    +A  +A  A D++  A   
Sbjct: 2   RVIVFFVEPEKVDNIGAMARVCKNFN-ADLYLINPKVDNYEKAFVVAKHAQDLLQKAIEN 60

Query: 63  -VDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            ++++DEA     + VGT+ +      +    L P E   +      +  + +  GRE +
Sbjct: 61  KLNSIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAERFANS--DIKLGIFIGRESI 118

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLTNEEL K  + V I AN EY  LN   A  +I YE+               H     P
Sbjct: 119 GLTNEELSKMDFIVTIPANKEYPILNATHATAIILYELFKHSKE--------GHVNLALP 170

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             + ++    ++++ +       +         +R+L T+    S+E N L G   SI +
Sbjct: 171 KKEQIDVLLDYVKKIIDKLP-QPDYRKEYYFIIMRKLITQGIINSREANTLIGFFRSIYE 229

Query: 239 QNK 241
             K
Sbjct: 230 NLK 232


>UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured
           marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ
          Length = 209

 Score =  183 bits (464), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 12/219 (5%)

Query: 25  MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSAR-- 82
           M   G+ +L LV    + D    A +     ++ N    DTL+EALA C + + TS    
Sbjct: 1   MVNFGIDDLALVK-GCEIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIKP 59

Query: 83  SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSS 142
                W    P+               AL+FGRE  GL   EL  C   + I  NP++  
Sbjct: 60  EGDKRW-FRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNPKFPI 118

Query: 143 LNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRE 202
           LNL+ AV ++ YE+         +G     ++      ++ ER    +   L  T + R 
Sbjct: 119 LNLSHAVGIVLYEIYR-------DGNHKNPKKRKAVSNEEFERLVDRIMDLLEETSYPR- 170

Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
               +    LRRL +R  P+  E   L GI  +I++  +
Sbjct: 171 RRLDRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209


>UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba
           RepID=B0EAZ5_ENTDI
          Length = 350

 Score =  183 bits (464), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 11/236 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            I +VLV   H  N+G+V R     G+  L++VNPL K   ++I ++   +  I  A I 
Sbjct: 96  KISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVIC 155

Query: 64  DTLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           ++L+E    C+L+VG +AR    +     ++  +E G   +       + LVFG E  GL
Sbjct: 156 NSLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAG--DMLSTMKGCLGLVFGNESNGL 213

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
             EE   C     I     Y  LNL+ AV +    + M       +G  +  E     + 
Sbjct: 214 NTEECDACDLLNKIDIRSHYPVLNLSHAVGIALNYMHM----RLRDGGDLVPEGCKENIA 269

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
            +        ++ L +   + E      +  +++L  R     +E   L G   ++
Sbjct: 270 KEKGELLEQWKEILHSV--MNEQREIGAVESMKKLLGRVMLTEREAAALDGAFKAL 323


>UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RQC6_FIBSS
          Length = 269

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 17/242 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNA 60
           ++  R+VLVE  H  N+G VARAM    L  L++V P   K   ++   AA + D++ NA
Sbjct: 1   MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYPKRDKVLDKSYHTAANSHDILDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            +V   ++A+  CS  V  S R  + ++   M+      L       +  +ALVFGRE  
Sbjct: 61  KVVHKFEDAIGDCSCAVAYSRRIFASSIKHTMVQNLSDML-----PEDGTIALVFGRESC 115

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHE---E 174
           GL  EE+  C Y   I   P   SLNL  AV +  YE+ R   LA  E   +       E
Sbjct: 116 GLALEEVNACTYQCEIPV-PGLMSLNLGQAVSISLYELCRSGALANGEGRAKRTTRGVAE 174

Query: 175 TPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
           T    +  ++ F   L++ L      + +      + L  L  R  P   EL+ L G+L 
Sbjct: 175 TGPATIQQIDGFKKFLDRYLTG----QYHDQAWRDSFLNTLLQRLHPTRNELSALFGLLR 230

Query: 235 SI 236
           ++
Sbjct: 231 NL 232


>UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MHK3_BDEBA
          Length = 261

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 18/250 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IRIVLV T +  N+G+ +RAM  MG+  L L++P  +   +A   AA     + N     
Sbjct: 7   IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66

Query: 65  TLDEALAG--CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP--------VALVFG 114
           + DE +     S+ V  +AR       + D  E       +A            V LVFG
Sbjct: 67  SWDEFMKQEPESIKVAFTARDGKGRQ-VRDVDEVLKDIADKAPQFQVESDVPYVVHLVFG 125

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEH 172
            E  GL  E+L+  ++   I    +  SLNLA A  +  Y +R  W    T+ +G +V  
Sbjct: 126 PEDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRR 185

Query: 173 EETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                  +D        LE+     GF +       V   LRR+  +  P  +EL IL  
Sbjct: 186 APQGIDGIDPEATLKTWLEEM----GFDLTRQRKINVFTVLRRMLLQNTPTKKELVILET 241

Query: 232 ILASIEQQNK 241
           +L    ++ +
Sbjct: 242 VLQQSIRKLR 251


>UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum
           acidiphilum ARMAN-2 RepID=C7DGL7_9EURY
          Length = 234

 Score =  179 bits (454), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59
           M++NI++  VE  +  N+G  AR +K   +  ++LVNP  K + + AI  +  A D+I N
Sbjct: 1   MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSA---RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           A I+  L+  +   S VVGT+A   +SR     ++   E       ++    + L+ GR+
Sbjct: 61  AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRGKSIEN-MTLLIGRD 118

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL +EEL +C+  V I  +  Y +LN++ A+ ++ Y      L  Q+     +     
Sbjct: 119 NTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLY-----ALTAQKPSSWPQEIGEL 173

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           Y    DL         ++ +  +IR      V      +  RA P  +E+N L    + 
Sbjct: 174 YADSSDLRMIKSLFGASVDSNPYIR--KKETVKKAFENMLVRANPTKKEINALTAAFSK 230


>UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2
          Length = 241

 Score =  178 bits (452), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 8/237 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NI  VL E     N+GS  RA+   G   L LV P+     +   +A  +  ++   
Sbjct: 5   IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
               +L EALA  S VVG S RSR     +  P E      A AA  PVA VFGRE  GL
Sbjct: 65  ETFASLGEALANVSYVVGFSGRSRGERQAVSLP-EFAPTLTALAATAPVAFVFGREDRGL 123

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N  +++C   ++I  +P Y SLNLA AV +  Y +R    + +                
Sbjct: 124 DNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIRGLATSAEPL------PSPDLADQ 177

Query: 181 DDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASI 236
              E     L+Q L    F R        +  +R L  R+RP   E+ ++  I   +
Sbjct: 178 ASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAICRKM 234


>UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum
           cryptofilum OPF8 RepID=B1L7Q2_KORCO
          Length = 246

 Score =  175 bits (445), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 15/248 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + ++ ++LVE     N+G +ARAMK  G   L +V P+ +   +AIA A  A DVI    
Sbjct: 1   MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60

Query: 62  IVDTLDEALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           I+ TL+EA  G  L++GT+AR SR        P    L S+  + +    LV GRE +GL
Sbjct: 61  ILTTLEEARRGVDLMIGTTARVSRYSVERRAIPIRDLLSSI--SWDAVYGLVLGRESIGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           T EEL  C     I ++ +Y +LN+A A  +I YE  +A+  +          E      
Sbjct: 119 TTEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAFKDSS-------RFEVKPVPR 171

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELNILRGILASIE 237
           +  E    ++ + +   G +R+    + +  +RR+  R        +E +   GI+ ++ 
Sbjct: 172 EAREVMIRYIGEVIDLLGGMRDR--ERFLFTMRRMIERTFPCGISEEEASQALGIIKAVR 229

Query: 238 QQNKGNKA 245
                 K 
Sbjct: 230 DALARVKG 237


>UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SV68_PHYPA
          Length = 287

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 34/253 (13%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG--ASDVIGN 59
           L+ +R+VLV   H GN+GSV       G+              +A  +AA   +   + +
Sbjct: 24  LERVRVVLVSPQHAGNVGSVNPQCDFRGV--------------EAQTMAANVTSRSKLEH 69

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             + DTL EAL  CS+ VG + RS  L  P           +    +  +A+VFGRE  G
Sbjct: 70  IRVTDTLPEALKDCSMAVGFTRRSGILRIP---DTRLANLCIPPLDSLNLAIVFGREDRG 126

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--------QVE 171
           LTNEEL  C +  +I +     SLNL+ AV V+   +       Q +             
Sbjct: 127 LTNEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLYEQIPHEQAHDPSNYVPIHSTSF 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLLAT-------GFIRENHPGQVMNKLRRLFTRARPESQ 224
                   ++ +E      E  L A        G        +++  +RR+  R  P  +
Sbjct: 187 KNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRMLLRTGPSLK 246

Query: 225 ELNILRGILASIE 237
           EL  L G L  +E
Sbjct: 247 ELGFLHGFLTMVE 259


>UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria
           RepID=B0CFB1_ACAM1
          Length = 243

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 22/241 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNAHI 62
               +LVE+    N+G+ ARA+ TMG T+L LV P    +S+ A  LA G+  V+  A I
Sbjct: 2   QFSFILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121
              L +AL        T+AR R   +  +  RE   +  A+      VA VFG ER GL 
Sbjct: 62  YQNLSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLN 121

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
             ++  C     I     Y SLNLA AV V ++ +  + +  ++         TP P ++
Sbjct: 122 RHDIDCCDLITTIPQGNPYPSLNLAQAVMVYSFMLSESAVHIKDQ----RLNRTPMPPLE 177

Query: 182 DLERFYGHLE----QTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
                Y +L+    Q +   G + E +   V   L      AR  +++L +L  I A I+
Sbjct: 178 -----YANLKHSSLQLMERIG-LAERYQKYVTRGL------ARLGTEDLYLLHNIRACID 225

Query: 238 Q 238
           +
Sbjct: 226 R 226


>UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola
           RepID=Q73KY3_TREDE
          Length = 251

 Score =  172 bits (437), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 15/245 (6%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVD 64
            I+L     + N+G+V R M   G ++L +       D  + + LA  AS V   A    
Sbjct: 6   TIILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYP 65

Query: 65  ----TLDEALAGCSLVVGTSARSRTLPWPM-LDPRECGLKSVAEAANTPVALVFGRERVG 119
                L EA + CS+++GTS R+      + + P +  L  + +     + LVFG ER G
Sbjct: 66  PTIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCLD-LKKFYGGRLGLVFGNERTG 124

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L +EEL  C + V I A  ++ S NL+ AV ++ Y + +A        +     E    L
Sbjct: 125 LIDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIAEKNNPLTEKDNPSIEKNIYL 184

Query: 180 VDDLERFYGHLEQ----TLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                +      +     L   G  ++            L + A   + E +I+   L  
Sbjct: 185 QKASMKMIQENSEQICNYLSGLGLFKKGGKKTNETFFIELLSSAG--ASEFDIMH--LTE 240

Query: 236 IEQQN 240
           I ++ 
Sbjct: 241 IFKKL 245


>UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella
           RepID=A1S6F2_SHEAM
          Length = 225

 Score =  169 bits (430), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 1/152 (0%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           + +VLVE +   N+G+ ARAMKTMG T L L+      + +A  +A GA+D++ NA ++D
Sbjct: 2   LSVVLVEPARAANVGAAARAMKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLD 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           + D+  A   L++ T+AR R  P   L+P E  + ++ ++    +ALVFGRE  GL+N+E
Sbjct: 62  SFDDLRAEFDLLIATTARERGSPRTFLNPEELAI-TLGQSGAQSMALVFGRESSGLSNQE 120

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           L +C     +    +Y SLNL  AV V  Y +
Sbjct: 121 LSQCDLFSYVPLAGDYPSLNLGQAVMVYTYAL 152


>UniRef50_A4RS14 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RS14_OSTLU
          Length = 445

 Score =  165 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 100/241 (41%), Gaps = 65/241 (26%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN------------------------ 37
           L N+R V+       N+G+ AR M+  G+ +L LV+                        
Sbjct: 62  LSNVRFVMCAPQGPANVGAAARVMQNFGIYDLALVDVGPFVLTTTTRSGDATREISDEAS 121

Query: 38  ---------------------PLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLV 76
                                PL     +A+  A  A  ++ +A   D  +EAL GCS V
Sbjct: 122 EGEGRAPERASEVLGSEARTTPLC---EEAMRYACAADWLLADAERCDDAEEALRGCSFV 178

Query: 77  VGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAA 136
           + T+AR R+   P++  RE   +   EA    VA++FG ER GLTN+EL   H  VAI  
Sbjct: 179 LATTARPRS-GTPLMTAREAAERVREEAKRGKVAVLFGNERTGLTNDELSWAHAAVAIPT 237

Query: 137 NPE---------------YSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
                              +SLNL+ AV ++AYE+ MA      NGE +  E+     VD
Sbjct: 238 AGAGKICRKSLKYTGGTGPTSLNLSHAVGILAYEIFMACGGEATNGEILP-EKAKLLTVD 296

Query: 182 D 182
           +
Sbjct: 297 E 297


>UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis
           KIN4/I RepID=A8A8Q9_IGNH4
          Length = 228

 Score =  165 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 16/234 (6%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62
            +R+VLVE     N G + R  K   +  +  V P     D + +  AA   D +    +
Sbjct: 2   KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           VD   EAL G  LVV TSA+  +   P+ D                + LVFGRE VGLT 
Sbjct: 62  VDDYKEALEG--LVVCTSAKV-SSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTR 118

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW-LATQENGEQVEHEETPYPLVD 181
           EEL++C   + + A+P+Y  +NL+ AV V+ +EV   + +      E+ +  +    L  
Sbjct: 119 EELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLAL-- 176

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                   L + L+      E    +V   ++RL  +A    QEL  L  +L+ 
Sbjct: 177 ---GVAERLARALIK----DEAKRERVTVAIKRLLAKA--TRQELRNLLYLLSK 221


>UniRef50_A8J096 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8J096_CHLRE
          Length = 324

 Score =  157 bits (399), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 27/257 (10%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-----DSQAIALAAGASD 55
           +L ++R+VLV   H  N+G+VARA       NL++V P           +A  +A G   
Sbjct: 22  LLSDVRVVLVAPKHEANIGAVARAAANFECLNLYIVAPRCDGAAAGWTGEARKVACG-DS 80

Query: 56  VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPW----------------PMLDPRECGLK 99
           V+  A +VDTL++ALA  S  +G + R+                     P+  P      
Sbjct: 81  VLDRAVVVDTLEQALADTSSSIGFTRRTGAARRTHASLGHLLAEFPFALPLQPPPVAVPT 140

Query: 100 SVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           S A A     ALVFGRE  GLT  EL+ C Y  AI       S+NL+ AV  +  E+   
Sbjct: 141 SAAAAGPCATALVFGREESGLTEAELRLCSYASAIPTGRVQPSMNLSHAVAAVLAELFSR 200

Query: 160 WLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA 219
                   E +  +      + +     G   ++               +  LR + +RA
Sbjct: 201 RCGLLAEVELLLRK---VAAIAEAVGMSGA--ESKGGGNNGNHGRRRLPLGHLRAVVSRA 255

Query: 220 RPESQELNILRGILASI 236
           R  + E   L G+ + +
Sbjct: 256 RVNAAESRSLHGLASGV 272


>UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix
           RepID=Q9YEM3_AERPE
          Length = 243

 Score =  156 bits (396), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 15/243 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ +RIVLVET    N+G VAR  +      ++LV+P      +A   AA A+  +  A 
Sbjct: 1   MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASL-EEAKRYAARAAWRLDAAR 59

Query: 62  IVDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           +V  L+EAL G S  + TS+    R      L P E     V  A    VA+VFGRE VG
Sbjct: 60  VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAE--VLAATPGTVAIVFGRESVG 117

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LT  E+  C  + +I A+P Y SLNL+ A  +  YEV  A          V+ E      
Sbjct: 118 LTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKARRGGAVARGGVDEELIKLLR 177

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
                          LA+  +      +V   L R+ +++    +E+  L  +L+   + 
Sbjct: 178 A----------YAAALASRLVHRERAEEVAVSLVRIASKSVMARREVENLIYLLSKACRA 227

Query: 240 NKG 242
            +G
Sbjct: 228 VEG 230


>UniRef50_Q0C6T9 Predicted rRNA methylase (SpoU class) n=1 Tax=Pelobacter
           carbinolicus DSM 2380 RepID=Q0C6T9_PELCD
          Length = 166

 Score =  156 bits (394), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 66/126 (52%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M + IR++LVE    GN+G VARAM   G++ L LVNP      +A   A  A+ ++G A
Sbjct: 5   MSKRIRVILVEPQSPGNIGMVARAMGNFGVSELRLVNPCTYLHPEARKFAVRAAPLLGKA 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +   L  ALA   + V  + R+  L   +LD  +    +    A   V LVFGRE  GL
Sbjct: 65  RVFPDLASALADLPMSVAATRRAGKLRGELLDVADAARLAAGLPAVEGVGLVFGREDAGL 124

Query: 121 TNEELQ 126
           T++E+ 
Sbjct: 125 TSDEVS 130


>UniRef50_C1E3H8 Predicted protein n=2 Tax=Micromonas RepID=C1E3H8_9CHLO
          Length = 467

 Score =  153 bits (388), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 95/246 (38%), Gaps = 49/246 (19%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP----------------------- 38
           L N+  VL       N+G +AR M+  G+T+L +V P                       
Sbjct: 75  LDNVCFVLCRPQGPQNIGGIARVMQNFGVTDLRIVAPEPGALAPPFDAADEYDRAIHPPE 134

Query: 39  ---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE 95
                    +A   A  A  ++ +A    T DEALA  + V  T+AR R     + D R 
Sbjct: 135 VRARAPLSDEAHKFAVHADWLLRDARRCATADEALADVAFVAATTARPRE-NLSIADVRA 193

Query: 96  CGLKSVAEAANT-PVALVFGRERVGLTNEELQKCHYHVAI----------------AANP 138
                   AAN   VA+VFG E  GLTN+EL + +  V I                    
Sbjct: 194 ASEVLRRHAANGTKVAVVFGNEATGLTNDELARANLGVMIATSAATSSPASSRKRYTGAK 253

Query: 139 EYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATG 198
             +SLNL+MAV V+AYE+  A    + +G       +    VD+  R    L     +  
Sbjct: 254 GATSLNLSMAVGVVAYELFQAMGEGEVSG-----FGSRLMTVDERARLADELAGARRSLD 308

Query: 199 FIRENH 204
            +R  H
Sbjct: 309 VLRRRH 314


>UniRef50_Q01FK7 Chromosome 01 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri
           RepID=Q01FK7_OSTTA
          Length = 384

 Score =  146 bits (370), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 91/238 (38%), Gaps = 62/238 (26%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWL--VNPLVKPDS--------------- 44
           L+N+R VL       N+G+ ARAM+  G+  L L  V P V                   
Sbjct: 55  LENVRFVLCAPQGAANVGACARAMQNFGVYELKLCEVGPNVLERDDAGETAATRGTESDA 114

Query: 45  ---------------------------QAIALAAGASDVIGNAHIVDTLDEALAGCSLVV 77
                                      +A+  A  A  ++ +A     ++ ALAGC+ V+
Sbjct: 115 ERILDEASEGEGKTPERAANQTLPLSAEALRYACAADWMLEDAERCADVEAALAGCTFVL 174

Query: 78  GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAAN 137
            T+AR RT   P++  RE   K   EA    VA++FG ER GLTNEEL      V +   
Sbjct: 175 ATTARPRT-GTPLMTAREAAKKVAEEAKRGKVAVLFGNERTGLTNEELAWASAAVVVPTA 233

Query: 138 PE---------------YSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
                             +SLNL+ AV +IA+  RM       +  + +  E      
Sbjct: 234 GAGKLCRKSLKYTGATGPTSLNLSHAVGIIAH--RMKTRTRTFSKREAKAFERVLAAA 289


>UniRef50_A4S331 Predicted protein (Fragment) n=3 Tax=Ostreococcus
           RepID=A4S331_OSTLU
          Length = 344

 Score =  138 bits (348), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 40/204 (19%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGL-TNLWLVNP-----LVKPD--------SQAIALA 50
           +  VL       N+G+ AR ++   L ++L +V P         D          A   A
Sbjct: 1   VSFVLCAPEGPLNVGAAARVIQNFSLPSSLRVVRPSASVLRDDDDGASAPRLHEDAYKFA 60

Query: 51  AGASDVIGNA-HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTP 108
             A  ++ +     +++ EA+A  SLVV T+AR R    P+L       K   E A    
Sbjct: 61  VHAKWMLDDCCARGESVLEAVAEASLVVATTARPRE-NLPLLTLGAACEKMRDEIARGGK 119

Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANP-----------EYS------------SLNL 145
            A++FG ER GLTNEEL+   + V+I  +            +YS            SLNL
Sbjct: 120 CAILFGNERTGLTNEELELAEFGVSIPTSATVGTSAMARRNKYSGGAGVDGSQTATSLNL 179

Query: 146 AMAVQVIAYEVRMAWLATQENGEQ 169
            MAV V+AYE+     A +E+ E 
Sbjct: 180 GMAVGVVAYELFSQVHAVREDDET 203


>UniRef50_C1FIG4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FIG4_9CHLO
          Length = 506

 Score =  133 bits (336), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 91/260 (35%), Gaps = 80/260 (30%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-------DSQAIAL---- 49
           +L N+  VL       N+GSVAR M+  G+ +L + +P           D  A       
Sbjct: 76  LLGNVCFVLCGPQGPQNVGSVARVMQNFGIYDLRITDPGPFVLAGGGTRDEDATPADGAS 135

Query: 50  ---------------------------------------AAGASDVIGNAHIVD-TLDEA 69
                                                  A+ A  +   A+      D  
Sbjct: 136 SSGGINSGAALGPDGLGSDLPEALRPTRIDSGGNPADDPASPAPPLCDEAYRFACAADWL 195

Query: 70  LAG-------------CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           LA              C+ V+ T+AR R    P++  R        EA    VA++FG E
Sbjct: 196 LADAKRCDTALEAISDCTFVMATTARPRG-NVPLVTARVAAEMLAKEAKRGKVAVLFGNE 254

Query: 117 RVGLTNEELQKCHYHVAIAANPE---------------YSSLNLAMAVQVIAYEVRMAWL 161
           R GLTNEEL + H  VAI    +                +SLNL+ AV V+AYE+ MA  
Sbjct: 255 RTGLTNEELAQAHACVAIPTAGQGTLCRRSLKYTGGTGPTSLNLSQAVGVLAYEMFMAAD 314

Query: 162 ATQENGEQVEHEETPYPLVD 181
           A    G + + +       +
Sbjct: 315 AANGVGTRGDGDGDGDGDGE 334


>UniRef50_B8C4T4 Predicted protein n=1 Tax=Thalassiosira pseudonana
           RepID=B8C4T4_THAPS
          Length = 167

 Score =  124 bits (311), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 24/156 (15%)

Query: 28  MGLTNLWLVNP---LVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGT----S 80
           MG  +L LV P    V    + I  A+GA DV+ NA    TLD+A+ G ++V GT     
Sbjct: 1   MGFNDLTLVKPHDLKVLHRQKVIQRASGAMDVLTNAQTYSTLDDAVDGFNVVCGTGMPFD 60

Query: 81  ARSRTLPWPMLDPR-----------------ECGLKSVAEAANTPVALVFGRERVGLTNE 123
                L    ++PR                 +        + +  +ALVFG E+ G+T  
Sbjct: 61  MYQTRLEREYVEPRIYFDGLISNVIANNHSTDDTNDRHQHSNSIRLALVFGSEKTGMTES 120

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           ++  CH  + I  NP++ SLNLA AVQ+IAY+ R+A
Sbjct: 121 DMDTCHVMLGIPTNPQFGSLNLAAAVQLIAYDWRVA 156


>UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class)
           RepID=A9WFI1_CHLAA
          Length = 261

 Score =  111 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGA--SDVIGNAHIV 63
           +VLVE +  GN+G++ R     G + + LV     P D  A+  + GA  S  I      
Sbjct: 118 VVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIARTSWP 177

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L  A      +VG+S R                   A     P+ LV G ER GLT+E
Sbjct: 178 DLLTWARQHRIALVGSSDRG-------------ASDYRATTYPRPLLLVLGSERHGLTDE 224

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           +L  C   V I       SLNLA+A  ++ YE
Sbjct: 225 QLAACDLVVRIPMRGRSDSLNLAVAAGILMYE 256


>UniRef50_C3RH76 tRNA/rRNA methyltransferase n=4 Tax=Bacteria RepID=C3RH76_9MOLU
          Length = 246

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           +VLV     GNMG++ R M     TNL ++ P V   D + I  + GA   I N    ++
Sbjct: 96  VVLVNPGDMGNMGTIIRTMLGFNYTNLAIIRPGVDVFDPRVIRASMGALFNI-NFEYFNS 154

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVGLTNE 123
            DE L        T    R +   ML     G K++ +  AAN   +LVFG E  GL ++
Sbjct: 155 FDEYL--------TKYPEREVYPLMLK----GAKNIHQITAANNKHSLVFGNESSGLPDD 202

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
            L+     V I  + +  SLNL+MA+ +      M     ++
Sbjct: 203 YLKY-GQSVFIPHSDKIDSLNLSMALGITLCHFSMMEFKDKQ 243


>UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME
          Length = 297

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 23/172 (13%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59
            ++ + L      GN+G+V R    +G   + L+     P S     A   S     +  
Sbjct: 142 NDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYR 201

Query: 60  AHIVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
           A   D L+       LVVGT  +     RT+P+                AN PV L+ G 
Sbjct: 202 ASEADFLNWRKGFSGLVVGTHLKGAVDYRTIPY----------------ANKPVILIMGN 245

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
           E+ GL +     C     I       SLNLA+A  V+ YE+R   L   E G
Sbjct: 246 EQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297


>UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF
          Length = 272

 Score =  101 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/162 (27%), Positives = 62/162 (38%), Gaps = 15/162 (9%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63
           V VET   GN G++ R    +G   +      V P    +  A+  S     V  N +I 
Sbjct: 122 VPVETREPGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNID 181

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L +  +    ++ T+A             E  L    E  + P A +FG E  GL  E
Sbjct: 182 DVLGQLRSQGLQILATAADG-----------EVDLDDAGELLSRPTAWLFGNEAHGLGEE 230

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
            L K  + V I       SLNLA A  +  YE   A  A + 
Sbjct: 231 LLAKADHRVRIPIRGRAESLNLATAASICLYESSKALFADEA 272


>UniRef50_A4RVJ3 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVJ3_OSTLU
          Length = 233

 Score =  101 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 20/184 (10%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60
           L+++ ++        N+G++ARA       +  +  PL   + +A +  A GA  ++  A
Sbjct: 55  LRDVCVIFCSPKTASNVGAMARACAAFECCDFRVATPLCDVECRACVNAAKGAQWLVPRA 114

Query: 61  H-IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-------------AAN 106
                +L++AL G    VGT       PW + D      ++  +                
Sbjct: 115 ADAHASLEDALRG---TVGT--VVGFHPWRLDDAEAEASRARFDDLAALTAAYPGGGEDG 169

Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
             +ALVFG E  GL+  EL  C    +I       SL++  A  +       A  A+ E 
Sbjct: 170 GKLALVFGNEADGLSERELALCDALCSIPMGRLIESLSVTHAAVIALSRFFEAREASAEA 229

Query: 167 GEQV 170
             + 
Sbjct: 230 RRRF 233


>UniRef50_C1N9R5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N9R5_9CHLO
          Length = 447

 Score = 95.6 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNA 60
           L ++ +VLV T   GN+G++ARA       +L LV P   P ++A ++ A GA  ++  A
Sbjct: 138 LSDVAVVLVGTKKAGNVGAIARACGAFECEDLRLVAPRADPYTRASLSAAKGAQHIVHGA 197

Query: 61  HIVDTLDEALAGCSLVVG 78
            + D +++AL GC   + 
Sbjct: 198 GVYDDVEDALRGCDAAIA 215


>UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamicum
           RepID=Q8NQN8_CORGL
          Length = 198

 Score = 95.2 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 15/159 (9%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGAS---DVIGNAHIV 63
           V VET   GN G++ R    +G   +      V P  ++A+  +AG+     V  N +I 
Sbjct: 49  VPVETREPGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIA 108

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L +  +    ++ TSA             E  L    E    P A +FG E  GL   
Sbjct: 109 DVLGQLRSKGLQILATSADG-----------EVDLDDADELLAKPTAWLFGNEAHGLDES 157

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
            L +  + V I       SLNLA A  +  YE   A  A
Sbjct: 158 LLAQADHRVRIPIRGRAESLNLATAASICLYESSKALFA 196


>UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria
           RepID=Q11C30_MESSB
          Length = 286

 Score = 94.1 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 15/167 (8%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59
           +++ + L      GN+G++ R +  +G   + LV     P S     A   S     +  
Sbjct: 129 EDLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETVRATMGSVFSVPLAR 188

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           A     L        L+VGT  +       +            + +  PV L+ G E+ G
Sbjct: 189 ADEAAFLAWREHFAGLMVGTHLKGSVDYRNV------------DYSGGPVLLLMGNEQQG 236

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
           L ++  + C   V I       SLNLA+A  V+ YE+R   L     
Sbjct: 237 LPDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRRTALPASHG 283


>UniRef50_C9RBF8 RNA methyltransferase, TrmH family, group 2 n=9 Tax=cellular
           organisms RepID=C9RBF8_AMMDK
          Length = 152

 Score = 92.9 bits (230), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 22/155 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65
           IVLVE     N G++AR     G T L LV PL    D + +  A      +   +  D+
Sbjct: 3   IVLVEPEIPANTGNIARTCAATGAT-LHLVRPLGFYTDDRHLRRAGLDYWHLVKIYYHDS 61

Query: 66  LDE---ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             +   A       + T+   R        P                 LVFG+E  GL  
Sbjct: 62  FADLCRAYPDACFFLTTTRAERWYTQVRYPPGSF--------------LVFGKESTGLP- 106

Query: 123 EELQKC--HYHVAIAANPEYSSLNLAMAVQVIAYE 155
           EE+ +      + I   P   SLNLA AV ++ YE
Sbjct: 107 EEILQAFPDRWIRIPMVPGARSLNLANAVAIVLYE 141


>UniRef50_Q1QBK2 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Proteobacteria
           RepID=Q1QBK2_PSYCK
          Length = 186

 Score = 92.5 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 11/178 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63
           I IVLV      N G++ R     G   L LV PL    D + +  A        +  + 
Sbjct: 3   IHIVLVAPKMPSNTGNIIRLCANSG-AQLHLVKPLGFELDDKKLRRAGLDYHEYAHLQVH 61

Query: 64  DTL---DEAL--AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           D      +AL  A C  +   + +     +      +   +S ++ +   VA+VFG E  
Sbjct: 62  DNWSIAKQALQDADCHTITALTTKLSKPFYDYDFGGQETAESGSDFSGNNVAMVFGSETA 121

Query: 119 GLTN---EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           GL +   E++      + +    +  SLNL+ +V +  YEV        + G  + +E
Sbjct: 122 GLADDIREDIG-ADNWLRLPMLADSRSLNLSNSVAICLYEVWRQQGFGGDEGRSIGYE 178


>UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6P2D0_9BACE
          Length = 252

 Score = 91.7 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHI-V 63
            +VL      GN+G++ R     G   L LVN    P S     A  GA   +      +
Sbjct: 110 YLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWETDL 169

Query: 64  DTLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           +T+   L G  + +  T+ R        +D R+  LK          A+V G E  G+++
Sbjct: 170 ETVRALLDGADIPLYATALRE-----DTVDVRDVDLK--------RAAVVIGSEGRGISD 216

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           E L  C   + I       SLN AMA  V+ +E+
Sbjct: 217 EALALCRRTIKIPMRARCESLNAAMAAGVVLWEM 250


>UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae
           RepID=B1ZWW3_OPITP
          Length = 250

 Score = 91.4 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 26/159 (16%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV----KPDSQAIALAAGASDVIGNAHI 62
           +VL    +  N+G++AR     GL  L L  P      +P   A  +A G    +  A +
Sbjct: 100 LVLDRIGNAHNLGAIARTAAFFGLPRLIL--PRDPAAAQPSEAAYRVAEGGMTHLELARV 157

Query: 63  VDTLDEAL-----AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
            D L   L     AG  ++   +                GL         P+ALV G E 
Sbjct: 158 -DDLPAFLRSLVAAGYDVIGAATR--------------GGLPQAQSHTGKPIALVLGNEE 202

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            GL+ E    C   V I  + +  SLN+++A  V+ +E+
Sbjct: 203 HGLSAEVAAACTRLVTIPGSGKVESLNVSVAGAVLIWEL 241


>UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9AZL1_HERA2
          Length = 266

 Score = 91.0 bits (225), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 20/159 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           + L    + GN+G++ R    +G   L L+     P    AI  + G+   +       T
Sbjct: 120 VALNGVGNPGNLGAIMRTCDAVGCEGLILIGDTTDPYHPAAIRASMGSLFALRMVRT--T 177

Query: 66  LDEALA----GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            DE  A        V+GT+              +   +    +  +P  L+ G ER+GL+
Sbjct: 178 FDEFAAWKQTNGYHVIGTT-------------PDVEQEYQTISYPSPAILLMGSERLGLS 224

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             E   C   V I       SLNL +A  ++ YE+    
Sbjct: 225 VGEQSVCDTLVRIPMAGTCDSLNLGVATSIVLYEMFRQQ 263


>UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC
           27064 RepID=B5GW91_STRCL
          Length = 182

 Score = 89.0 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 10/159 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63
           + ++L       N+GS+ R    +G+  L+L      P +++A  +  G    +      
Sbjct: 27  VALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYLD-VQTF 85

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           +TL EA+           R+       L+  +  +       +    +  G E  G++ +
Sbjct: 86  ETLPEAVERV--------RADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQ 137

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
            L  C     I       SLN+A A+ V  YEVR    A
Sbjct: 138 ALGMCDAVAFIPQLGRVGSLNVATALAVACYEVRRQDWA 176


>UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3
          Length = 274

 Score = 87.9 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
             + +VL      GN+G++ R     G+  +WL    V P S  +  ++  S ++     
Sbjct: 119 ARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQ 178

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           + +L   L            ++ L   +    +            P  ++FG E  GL+ 
Sbjct: 179 LQSLPPLLEKFH--------TQGLQL-IATVPQATQTLWEIDFQRPTIVIFGSEGQGLSA 229

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
             L+   + VAI   P+  SLN+A+AV V+ YE R    A    G
Sbjct: 230 PVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAASTPG 274


>UniRef50_C6XJZ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC
           49814 RepID=C6XJZ6_HIRBI
          Length = 275

 Score = 85.6 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 20/157 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASD----VIGNAH 61
           I L E    GN+G++ R     G+  + LV     P S + +    GA      V+ +  
Sbjct: 125 IALYEARDPGNLGTILRTADAAGIDGVILVEQCCDPFSVECVRATMGALFSNNIVLASFT 184

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             D         ++ +  ++ + T+     +             ++   ++ G E+ G+ 
Sbjct: 185 EFDNW---RRKANIKMAAASVNGTMRHDQAE------------YSSKSVILMGNEQSGIP 229

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
                 C   + I       SLNLA A  ++ YEV  
Sbjct: 230 EAAENACDILIKIPMAGAADSLNLAQATAIMTYEVWK 266


>UniRef50_C1ED00 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ED00_9CHLO
          Length = 369

 Score = 85.6 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGNA 60
           L+++ +V+V +   GN+G++ARA  +    +L LV P V P S+ +++ A GA  V+  A
Sbjct: 80  LEDVCVVVVGSKKAGNIGAIARAAASFECEDLRLVAPRVDPTSRSSLSSAKGAQHVVHGA 139

Query: 61  HIVDTLDEALAGCSLVVG 78
               ++ EA+A C   V 
Sbjct: 140 GEYLSVAEAIADCDAAVA 157



 Score = 65.2 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 83  SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSS 142
                  + +P+    K+        +ALVFGRE  GLT+EE+  C     I       S
Sbjct: 262 EHGWKRRVYNPKNRNQKNR---GRGKLALVFGREVDGLTDEEVNLCDAACRIPTGRLIES 318

Query: 143 LNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+++ A  +I  +      +   +  ++       P 
Sbjct: 319 LSVSHAAVIILSQYYQHRASAAGHAPRLSELPVMAPA 355


>UniRef50_UPI0001699FF1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Endoriftia
           persephone 'Hot96_1+Hot96_2' RepID=UPI0001699FF1
          Length = 92

 Score = 85.6 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 150 QVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVM 209
           Q++AYEV +A L   +   +   E       + LE F+ HL Q L   GF       +++
Sbjct: 1   QLLAYEVYLASLEEADKPLRAPRE---VASAEMLEGFHTHLAQALEDIGFADPRQSDKLL 57

Query: 210 NKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
            +LR LF RARP+  E+NILRGIL++ + +    +
Sbjct: 58  RRLRALFHRARPDRDEINILRGILSAAQGRKSMRR 92


>UniRef50_C1N4L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N4L1_9CHLO
          Length = 513

 Score = 85.2 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 16/97 (16%)

Query: 78  GTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAAN 137
            T+AR R    P++  R       AEA    VA++FG ER GLTNEEL   H  VAI   
Sbjct: 197 ATTARPRE-NVPLVTARNAAKLLAAEAKRGKVAVLFGNERTGLTNEELGTAHAAVAIPTA 255

Query: 138 PEYS---------------SLNLAMAVQVIAYEVRMA 159
            + S               SLNL+ AV VIAYE+ +A
Sbjct: 256 GQGSLCRKSLKYTGGTGPTSLNLSQAVGVIAYEMFLA 292


>UniRef50_A3DBN9 RNA methyltransferase, TrmH family, group 2 n=9 Tax=Clostridiales
           RepID=A3DBN9_CLOTH
          Length = 164

 Score = 85.2 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 24/158 (15%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIG--NAH 61
           I +VLVE     N G++AR    +G  NL LV PL    + + +  A    D     N  
Sbjct: 3   INVVLVEPEIPQNTGNIARTCAAVG-ANLHLVKPLGFSVEDRYLKRA--GLDYWDKVNIK 59

Query: 62  IVDTLDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             D+  E             T+ +++ L   +  P +C              +VFG+E  
Sbjct: 60  YYDSFSELRDKYKEHIFYYSTT-KAQKLYTDVKYPDDCF-------------IVFGKETA 105

Query: 119 GLTNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           GL  E L +   + + I    +  SLNL+ +V +I YE
Sbjct: 106 GLPEELLVENKEWCIRIPMRDDIRSLNLSNSVAIIVYE 143


>UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium
           ATCC 15444 RepID=Q0BY95_HYPNA
          Length = 271

 Score = 84.0 bits (207), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63
           + I L E    GN+G++ R     G++ + L+     P S +A+  + G+        + 
Sbjct: 123 LYIALYEVRDPGNLGTILRTADCAGVSGVILIGTCCDPYSFEAVRASMGS--------VF 174

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D +  A         T  +   +               A+     + ++ G E+ GL + 
Sbjct: 175 D-VPFAHTDFD-AFNTWRKGEGMSLTAASVNGTVRHDGADFTGGSI-ILMGNEQAGLPDW 231

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
               C     I       SLNLA A  ++ YE    
Sbjct: 232 VEAACDTLSLIPMRGGADSLNLAQASALMIYEAWRQ 267


>UniRef50_D2RKI7 tRNA/rRNA methyltransferase (SpoU) n=10 Tax=Bacteria
           RepID=D2RKI7_ACIFE
          Length = 156

 Score = 84.0 bits (207), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 23/167 (13%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           IVLVE    GN G++AR     G + L LV PL    D + +  A      + + H  D+
Sbjct: 4   IVLVEPEIPGNTGNIARLCAATGAS-LHLVRPLGFSVDDKYLKRAGLDYWHLVDIHYYDS 62

Query: 66  LDEALA---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           ++E LA        + T+   ++       P                 L+FG+E  GL  
Sbjct: 63  VEEVLAAYPDSPRFLLTTHAHKSYSRVHYGPDSL--------------LIFGKESAGLP- 107

Query: 123 EELQKCH--YHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQEN 166
           E  ++ H    V I    E  SLNLA +V ++ YE +R      QE 
Sbjct: 108 EAFRQAHEEECVRIPMVSEARSLNLANSVSIVLYEALRQNDFDLQEG 154


>UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PD55_9FIRM
          Length = 264

 Score = 83.7 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            ++L      GN+G++ R     G   + L        +  +  A+        A + D 
Sbjct: 120 YLLLSSLQDPGNVGTILRTAAAFGTDGVILSADCPDLYAPKVLRASMGGVFRARACVSDD 179

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L  ++A          R+  +P     P E  +     + +   A+V G E  G+  E  
Sbjct: 180 LSASIAAL--------RAAGVPVWAAMPAEGSVSLRDISLHGGGAVVVGNEGGGIAPELA 231

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
             C   + I   P   SLN AMA  VI +E+  
Sbjct: 232 ALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264


>UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus
           RepID=Q2JI19_SYNJB
          Length = 378

 Score = 83.3 bits (205), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 21/173 (12%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAH 61
           + +VL       N+G++AR+++  G+  + +  P        S  + +AAGA   +  A 
Sbjct: 200 VLVVLDGIQDPHNLGAIARSVEAFGMQGMVI--PQRRAAGVTSTVMKVAAGALSTLPVAR 257

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L+        V GT++R                   +     P+ALV G E  
Sbjct: 258 VVNLNRALEYLKEQGFWVYGTTSRG-------------ADPIYSADFQRPIALVVGSEGE 304

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171
           G++    + C   ++I       SLN ++A  +  YE+            +V+
Sbjct: 305 GISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRPEVD 357


>UniRef50_Q2Y7V6 tRNA/rRNA methyltransferase (SpoU) n=6 Tax=Betaproteobacteria
           RepID=Q2Y7V6_NITMU
          Length = 279

 Score = 83.3 bits (205), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           ++  ++L      GN+GS+ R+    G ++++L N      S     AA  +  +   H 
Sbjct: 129 ESFCVLLEAIQDPGNVGSILRSAAAAGASDVYLSNDCADAWSPKTLRAAMGAHFLVRIHE 188

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121
              L E              +RT    ++       KS+ +   + PVA VFG E  GL+
Sbjct: 189 RANLAEV-------------ARTFGGKVIASILDAKKSLYQMRLSGPVAFVFGNEGAGLS 235

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           +E LQ  H  + I    +  SLN A A  V  +E
Sbjct: 236 DELLQVAHERITIPMPGDAESLNAAAAAAVCFFE 269


>UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavobacteria bacterium
           MS024-2A RepID=C0BJH2_9BACT
          Length = 264

 Score = 82.9 bits (204), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 19/163 (11%)

Query: 2   LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIG 58
           L    IVLV       GN+G++ R      +  + + NP     +  +I  + G   ++ 
Sbjct: 110 LNKNSIVLVIEAPEKPGNIGALYRTAAAAKIDAVIIANPKTDFYNPNSIRSSLGGIFILP 169

Query: 59  NAHIVDTLD--EALAGCSLVVGTSAR-SRTLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
            A I  +++    L    + + T+A  S+ +P+   +               P ALV G 
Sbjct: 170 TA-IASSIEVIAYLKENKITIATAAINSKAVPYDQFE------------YTPPCALVMGT 216

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           E  GL    L + + ++ I    E  SLNL+++  ++ YE + 
Sbjct: 217 ESTGLDQLWLNETNQNLMIPMADEVDSLNLSVSAGILMYECQR 259


>UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_LEPBJ
          Length = 277

 Score = 82.5 bits (203), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 14/164 (8%)

Query: 2   LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIG 58
            + ++ +LV       GN+G++ R  +  G   + + +P +   +   I  + GA     
Sbjct: 124 FKKLKPILVIEGVEKPGNLGTILRTAEGAGFHTVIVSDPKLDLFNPNVIRASTGALF--- 180

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
                 TLD  L     + G   +        + P E             +ALVFG E+ 
Sbjct: 181 ------TLDVYLGEIETIYGI-LKKNHYRTLAVTP-EAKKFYFDADLKGKIALVFGSEQY 232

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           GL++        ++++    E  SLNLAM+  ++ YEV      
Sbjct: 233 GLSSYARNHSDEYLSLPMLGEADSLNLAMSAGILMYEVIRQGFE 276


>UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 Tax=Corynebacterium
           amycolatum SK46 RepID=UPI000185C1B1
          Length = 276

 Score = 82.1 bits (202), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 14/152 (9%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           ++ VE +  GN+G++ R    +G   + L    V P +S+A+  +AG+        +  T
Sbjct: 131 VIPVECNDPGNVGTIVRMTDALGAGAVILAGDSVDPLNSKAVRSSAGS--------VFHT 182

Query: 66  LDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKS-VAEAANTPVALVFGRERVGLTNE 123
                    +VV    R R   +  L    +  L   V    + PVA +FG E  GL+ E
Sbjct: 183 PVARERDIDVVV---ERVREAGFTTLATAMDGALTLGVDALPDGPVAWLFGNEAHGLSEE 239

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
                   VAI    E  SLNLA A  +  +E
Sbjct: 240 ITASAGASVAIPIKGEAESLNLATAAAMCLWE 271


>UniRef50_B8CX36 RNA methyltransferase, TrmH family, group 2 n=20 Tax=Clostridia
           RepID=B8CX36_HALOH
          Length = 162

 Score = 82.1 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 59/169 (34%), Gaps = 24/169 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI--V 63
           IVLVE     N G++AR     G ++L L+ PL    D + +  A    D      I   
Sbjct: 3   IVLVEPEIPQNTGNIARTCAVTG-SSLHLIEPLGFSIDDRYLKRA--GLDYWDKLDIYYY 59

Query: 64  DTLDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           D+L+E +      +    T+              +        +      +VFG+E  GL
Sbjct: 60  DSLEELMKKYKDSNFYFATT--------------KAPKSYDIVSYQENDFIVFGKETAGL 105

Query: 121 TNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
               L       + I       SLNL+ +V +I YE            E
Sbjct: 106 PESLLKNNIENCIRIPMKDNTRSLNLSNSVAIILYEALRQLNFPGLKHE 154


>UniRef50_C7N513 Predicted rRNA methylase SpoU family n=1 Tax=Slackia
           heliotrinireducens DSM 20476 RepID=C7N513_SLAHD
          Length = 159

 Score = 81.7 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 13/163 (7%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            +I +VL E     N G+VAR    +G T L LV P+    ++   L     D   +  +
Sbjct: 5   PHIHVVLFEPEIPQNTGNVARTCAVVGAT-LHLVEPMGFRLTE-RNLKRSGCDYWDDVDV 62

Query: 63  V--DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           V   +++  L+           +  L         C            V LVFGRE  G+
Sbjct: 63  VKHASVEAFLSQHG--------NDELHLFTSHTETCYTDVRYGEGGGDVYLVFGRESRGI 114

Query: 121 TNEELQ-KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
             + L       V I       SLNL+ AV V  YEV   W  
Sbjct: 115 DEDVLAAHVDRCVRIPMRHNMRSLNLSNAVAVGVYEVIRQWGG 157


>UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L451_EXISA
          Length = 248

 Score = 81.7 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 56/167 (33%), Gaps = 29/167 (17%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS------- 54
           ++ + +VL      GN+G++ R     G   + L    V P +  +  A   S       
Sbjct: 102 MKKV-LVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVT 160

Query: 55  --DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALV 112
             D++        L E       V GT                        A    VALV
Sbjct: 161 SVDLLEK------LPELKEDGFHVYGT-------------ALSKATSYEQVAFEEKVALV 201

Query: 113 FGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            G E  G+  + L  C   V I    +  SLN A+A  ++ Y + + 
Sbjct: 202 IGNEAQGVHADVLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248


>UniRef50_A7BD02 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus
           ATCC 17982 RepID=A7BD02_9ACTO
          Length = 246

 Score = 81.3 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 7/152 (4%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VL +    GN+G++ R     G   +  V   V   S  +  ++  S       +V + 
Sbjct: 88  VVLAQGRDPGNVGTIIRTADAFGAVGVVAVAGTVDAASPKVVRSSAGSVFHIPVCVVPSF 147

Query: 67  DEALA----GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            +A A      + ++GTS  + ++    L  +    +S     +   A VFG E  GL+ 
Sbjct: 148 ADARALIHGRSAALLGTSGGAASISLSDLLVQVVSARSRL---SQSHAWVFGNEARGLSG 204

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
           +E++ C   V+I    +  SLN+A A     +
Sbjct: 205 DEMRLCDGLVSIPMTGDAESLNVASAAATCLF 236


>UniRef50_C6X216 Putative rRNA methylase n=1 Tax=Flavobacteriaceae bacterium 3519-10
           RepID=C6X216_FLAB3
          Length = 257

 Score = 81.3 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           I++      GN+G+V R+ +  G+  L + +P V   +   I  + G    +    I  +
Sbjct: 109 IIIESVEKPGNLGAVLRSCEAFGIDALIITDPKVDFYNPNVIRSSVG---CLFGMDIFQS 165

Query: 66  ----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
               L + L      + T+              +       +      ALVFG E  GL+
Sbjct: 166 ENNALLDFLESNHFKIFTTR-----------MSDDATDIFNQDFGGRSALVFGTEHSGLS 214

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
           +  + K    + +       SLNL+ AV V  YE+    L
Sbjct: 215 DFWIGKGTNTL-VPMTGSIDSLNLSNAVAVSGYEILRQKL 253


>UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hyphomicrobium
           denitrificans ATCC 51888 RepID=C6QC90_9RHIZ
          Length = 269

 Score = 81.3 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 25/158 (15%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAG---ASDVIG-NAH 61
           + L E    GN+G++ R     G   + LV     P S  A+    G   A  ++     
Sbjct: 124 VALEEIRDPGNLGTIVRTADATGCAGVILVGTTCDPYSLDAVRATMGSIFAVPIVKMERS 183

Query: 62  IVDTLDEALAGCSLVVGT--SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
              +L  A AG   V+GT  +AR                +        P  +V G E  G
Sbjct: 184 AFISLQRAWAG--DVIGTHLTAR----------------EDFRSLYREPQLIVMGGEGPG 225

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
           L++E    C   V I    +  SLNLA+A  ++ Y++R
Sbjct: 226 LSSEAAASCTKLVKIPMAGKLDSLNLAVATGLMLYQIR 263


>UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAQ0_DESAH
          Length = 291

 Score = 80.2 bits (197), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 9/168 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +  I L       N+GS+ R+    G ++L L N   + ++     A G +D + +  
Sbjct: 131 LLDFHIALDGLRSLFNVGSIFRSCDAAGFSSLILGNTPGRENAAVRKTAMGTADWMPHTQ 190

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            VD L + L           +++      ++  E          +    LV G E  G++
Sbjct: 191 TVD-LAQTLVDM--------KAQGYTITAVETAEQSKPYHDNDWHHRGVLVVGNEEYGIS 241

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169
           +  L  C   V I      +SLN+A A  ++ + +     A   +  Q
Sbjct: 242 SHVLAVCDQVVHIPMFGRKNSLNVANAAAILMFHITTCLHAGHPDPGQ 289


>UniRef50_C7R3Q5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Jonesia denitrificans
           DSM 20603 RepID=C7R3Q5_JONDD
          Length = 275

 Score = 79.8 bits (196), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGAS---DVIGNAHIV 63
           VL +    GN G+V RA    G   + L    V   + + +  +AG+     VI NA +V
Sbjct: 120 VLTDVRDPGNAGTVIRAADAAGADVVILAGDSVDLMNPKVVRSSAGSLFHMPVITNASLV 179

Query: 64  DTLDEALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           D +  AL    + + GT+      P+  L   +        +   P A VFG E  GL+ 
Sbjct: 180 D-VHGALKMAGIPLFGTT------PYADLTLDDLVEPQGPTSVGAPHAWVFGNEAQGLSV 232

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
           E+   C   V I       SLNLAMA  +  Y    A   T  
Sbjct: 233 EDQSMCDSLVRIPMYGRAESLNLAMAATICLYTSARALRTTTR 275


>UniRef50_C7HXS5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thiomonas intermedia K12
           RepID=C7HXS5_THIIN
          Length = 262

 Score = 79.8 bits (196), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 20/154 (12%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVD 64
            ++L      GN+G++ R     G   ++L+         + +  A GA  VI    + +
Sbjct: 113 ALILDRVQDAGNVGTMLRTAAASGCGAVYLLRGCAGVWSPKVLRSAMGAHFVIP---VFE 169

Query: 65  T--LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLT 121
               ++ L               +P P+          + E     PV  +FG E  G++
Sbjct: 170 DPPWEQVLN-------------IVPRPIYATHMQADTVLYELDLKEPVTWIFGNEGQGIS 216

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           +  + KC   V I       SLN+A +  +  YE
Sbjct: 217 DALVAKCSALVRIPQADGVESLNVAASAAICLYE 250


>UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum
           DSM 15641 RepID=C7MMG3_CRYCD
          Length = 300

 Score = 79.8 bits (196), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + IVL   +  GN+G++AR+ +++G   + + N       +     +AGA   I  A + 
Sbjct: 109 LIIVLDHITDAGNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQV- 167

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLTN 122
             L +AL          AR +   + +    E     + +A     V LV G E  GL  
Sbjct: 168 ANLQQAL----------ARLKNEGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLAR 217

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
              + C + V++      SSLN+A +  V  YE    
Sbjct: 218 LTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQ 254


>UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YIM1_THEYD
          Length = 261

 Score = 79.8 bits (196), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 18/159 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHI-VD 64
           ++       GN+G++ RA +  G   + + +    P S +A+  +AG+   +    + V 
Sbjct: 113 VIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIKVTVK 172

Query: 65  TLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            ++E ++  G +LV+                 +  + S       P+A+VFG E  G++ 
Sbjct: 173 EIEEFVSKYGLNLVI--------------TDLKATISSFNMDFTKPLAIVFGNESKGVSQ 218

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
           +     H    I    +  SLN+AMA   I YE+     
Sbjct: 219 DLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQRF 257


>UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus
           sp. MC-1 RepID=A0L4P9_MAGSM
          Length = 246

 Score = 79.8 bits (196), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 12/155 (7%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIVDT 65
           ++L       N+G++ R+ +  G   + L      P ++ AI  +AGA++ +    + + 
Sbjct: 99  VILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTN- 157

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGLTNEE 124
           L  A+             R + W +    E G   +       P+ALV G E  GL    
Sbjct: 158 LARAIEQLQ--------QRNV-WVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRLT 208

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            ++C    AI       SLN+++A  V  YEV   
Sbjct: 209 RERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQ 243


>UniRef50_B2A6C6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia
           RepID=B2A6C6_NATTJ
          Length = 152

 Score = 79.8 bits (196), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 25/164 (15%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI--- 62
           +VLVE     N G+++R       T L LV PL      + +  A    D          
Sbjct: 3   VVLVEPEIPPNTGNISRTCAVSN-TTLHLVEPLGFSISDRELKRA--GLDYWDKLSYQVH 59

Query: 63  --VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
               +++  L    + + T+ R +   + +  PR+               LVFG+E  GL
Sbjct: 60  ENFTSVENLLQTHPIYIATT-RGKNYYYDIEYPRDSV-------------LVFGKETEGL 105

Query: 121 TNEELQKC-HYHVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLA 162
            +  + K     + I   P++ SLNL+ +V V+ +E +R     
Sbjct: 106 PDWIINKYYENSIRIPMAPDFRSLNLSNSVAVVLFEALRQQSFP 149


>UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112
           Tax=Proteobacteria RepID=RLMB_NITEU
          Length = 260

 Score = 79.8 bits (196), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 17/173 (9%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           +VL       N+G+  R     G+  + +     V   +    +A+GA D +    + + 
Sbjct: 99  LVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNL 158

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             TL E       +VGT+A             +      +     P+A V G E  G+  
Sbjct: 159 ARTLRELKEMGLWIVGTAA-------------DAPDTLDSVTLTRPLAWVLGAEDGGMRR 205

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
              + C   V+I  +    SLN++++  +  +E          +G  V   + 
Sbjct: 206 LTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQRTGSGLNVPAPKN 258


>UniRef50_B3E096 tRNA (Cytosine34-2'-O-)-methyltransferase, SpoU class n=5
           Tax=Bacteria RepID=B3E096_METI4
          Length = 161

 Score = 79.4 bits (195), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 15/158 (9%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDT 65
           +VLV      N G++AR       + L LV PL    +  A+  A    D      +   
Sbjct: 12  VVLVAPQIPQNTGNIARICAAT-FSELHLVKPLGFSLEDAALRRA--GLDYWKEVRLF-- 66

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L E           +A +        +         A  A   + LVFGRE  GL+   L
Sbjct: 67  LWEGWDHF------TAANPRKRLLFFETGTYPPYFTASFAPGDM-LVFGRETKGLSQRIL 119

Query: 126 QKC-HYHVAIAA-NPEYSSLNLAMAVQVIAYEVRMAWL 161
               H+  +I   N +  SLNLA  V ++ YE     L
Sbjct: 120 SFSPHFIYSIPILNGKVRSLNLANCVSIVLYEALRQIL 157


>UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7
           Tax=Coriobacteriaceae RepID=C8W818_ATOPD
          Length = 338

 Score = 79.4 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD- 64
           +VL   +  GN G++ R+ + +G   + + N    +    A   +AGA   +  A + + 
Sbjct: 191 VVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVSNL 250

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              L+E  A      G++                            +ALV G E  G++ 
Sbjct: 251 PRALEELKAAGFWTCGST-------------EHATQSVWEAPMGGRLALVMGSEGSGISR 297

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
             L+KC +   +    +  SLN+A A  V+ YE 
Sbjct: 298 LMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEW 331


>UniRef50_A8SKI8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC
           33270 RepID=A8SKI8_9FIRM
          Length = 234

 Score = 79.4 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 12/148 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           I+L E    GN+G++ R     G  N+ +++     D + +  + GA   + N  I  T 
Sbjct: 93  ILLCEPRDKGNLGTILRTALGFGFKNIAIIDGCDVFDPKTVRASMGAIFKM-NVEIFKTF 151

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
           +E           +     +   +L+     LK+V      P  L+FG E  GL N +L 
Sbjct: 152 EEYKN--------TFEENNIYSFILNKGSVSLKNVEIKK--PFTLMFGNESHGLENFDL- 200

Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAY 154
           K    V I  + +  S NL +A  +  Y
Sbjct: 201 KGTTPVFIEQSEDIDSFNLPIASSIAMY 228


>UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria
           RepID=Q3AXD9_SYNS9
          Length = 652

 Score = 79.4 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 22/182 (12%)

Query: 9   LVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIVD- 64
           L   +   N+G+V R+ + MG   L L  P          A  +AAGA + +  A +V+ 
Sbjct: 388 LDGITDPHNLGAVVRSAEAMGAHGLVL--PQRRSAGLTGSAAKVAAGAMEHLPVARVVNL 445

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             +L++       V+G +A             E  +  +      P+ LV G E  GL+ 
Sbjct: 446 NRSLEKLKDSGYRVIGLAA-------------EGDVTLMDVDLEGPLVLVTGSEDQGLSL 492

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPYPLVD 181
              + C   V I       SLN ++A  +  YEV R  W+              P     
Sbjct: 493 LTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRNWMKDIHGQAPSPPIVRPQMKTQ 552

Query: 182 DL 183
           ++
Sbjct: 553 EV 554


>UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neisseriaceae
           RepID=B9Z0Z0_9NEIS
          Length = 264

 Score = 79.0 bits (194), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 13  SHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAG 72
              GNMG++ R+    G+  ++L        S  +  A   +  + N H    L E L G
Sbjct: 124 QDPGNMGTILRSAAASGVMEVFLSKGCADVFSPKVLRAGMGAHFVLNLHEAADLAEVLGG 183

Query: 73  CSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHV 132
            +               ++   E      A+     VA VFG E  G++   LQ     V
Sbjct: 184 FA------------GRKLVTHLEGSQSLYAQDLRGDVAFVFGNEGAGVSAGLLQLADCRV 231

Query: 133 AIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
            I       SLN+AMA  +  +E      A+  
Sbjct: 232 RIPMPGHAESLNVAMAATICLFERVRQLDASAA 264


>UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH
          Length = 244

 Score = 79.0 bits (194), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63
           I+L +     N+G++ R     G   L    P              +AGA + +  A + 
Sbjct: 97  IILDQVQDPHNLGAIIRTAYAAGAHGLIY--PRKRSADITPVVTKASAGAVNHLPLAKVS 154

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T+ +       + GT  R      P                  PV LV G E  G+
Sbjct: 155 NINYTIADLKDMGLWITGTDVRG---TRPYYSAD----------YKGPVGLVIGNEGKGM 201

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
                + C + V I  + E  SLN ++A  V+ +EV     +T
Sbjct: 202 RRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRST 244


>UniRef50_A9NFI2 RNA methyltransferase, TrmH family n=1 Tax=Acholeplasma laidlawii
           PG-8A RepID=A9NFI2_ACHLI
          Length = 173

 Score = 79.0 bits (194), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 58/159 (36%), Gaps = 16/159 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK--PDSQAIALAAGASDVIGNAHI 62
           I +VL +     N G++ R     G+  L L+ PL     D++    A    D + N  I
Sbjct: 2   IHVVLCQPEIPQNTGNIMRTCVGSGVH-LHLIKPLGFKIDDTKLRRSAVDYYDAL-NFEI 59

Query: 63  VDTLDEALAGCSLVVGTS-ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            +  +          GT    SR        P         +A    + LVFG E  G+ 
Sbjct: 60  HEDFESFQNEHP---GTYLYLSRYGRKTHSAPN-------YQAIKGDIYLVFGSESYGID 109

Query: 122 NEELQK-CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
              L K       I  N +  SLNL+ AV +  YEV   
Sbjct: 110 RALLSKNIENTFRIPTNDKIRSLNLSNAVAITVYEVLRQ 148


>UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae
           RepID=B1ZVF9_OPITP
          Length = 296

 Score = 78.6 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 20/160 (12%)

Query: 2   LQNIRIVLV--ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA---SDV 56
           LQ    +LV       GN+G++ R+    G   + + +P+    +  +  A+     S  
Sbjct: 144 LQRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVP 203

Query: 57  IGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGR 115
           +  A     L    A     + T+                  K   +A    P+A+V G 
Sbjct: 204 LVVAESAPVLAWLRAQGVRTIATT--------------PAAEKLYTDADLRGPLAIVMGS 249

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           E+ GL+   L+ C   V I    +  SLN+AMA  +  +E
Sbjct: 250 EQYGLSEFWLKNCDLPVRIPMAGQADSLNVAMATIITLFE 289


>UniRef50_C8W249 RNA methyltransferase, TrmH family, group 2 n=2 Tax=Clostridiales
           RepID=C8W249_DESAS
          Length = 168

 Score = 78.6 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 64/173 (36%), Gaps = 27/173 (15%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI-ALAAGASDVIGNAHIVDT 65
           IVLVE     N G++ R       + L LV PL           A      +   +  D+
Sbjct: 3   IVLVEPEIPANTGNIVRTCAATS-SVLHLVRPLGFSTEDKYLKRAGLDYWYLVEIYYHDS 61

Query: 66  LDEALAGCSLVVGT-----SARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             EAL      +GT     +  +R        P +               LVFG+E  GL
Sbjct: 62  F-EALKE-KYPLGTFYYVSTKAARHYCDVEYGPGDF--------------LVFGKETRGL 105

Query: 121 TNEELQKCHY--HVAIAANPEYSSLNLAMAVQVIAYE-VRMAWLATQENGEQV 170
             E L + +    V I    +  SLNLA +V ++ YE +R    A  E   +V
Sbjct: 106 P-ESLLQANSGNCVRIPMVSDARSLNLANSVAIVLYEALRQQAFAGLETAGRV 157


>UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19
           Tax=Proteobacteria RepID=RLMB_COXBU
          Length = 250

 Score = 78.6 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 21/166 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV---KPDSQAIALAAGASDVIGNAHIV 63
           ++L       N+G+  R+    G+    ++ P             +A GA+++     + 
Sbjct: 100 LILDGVKDPHNLGACLRSANAFGVR--AVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVT 157

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T+D        +VGT               E             +A+V G E  GL
Sbjct: 158 NLSRTIDWLQKEGVWIVGT-------------AVEAETLIQEIDLTGDIAIVLGSEGAGL 204

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
                ++C +   I       SLN+++A  +  YEV+    A   +
Sbjct: 205 RRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQREAPAPS 250


>UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes
           RepID=A3DH38_CLOTH
          Length = 277

 Score = 78.3 bits (192), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 21/159 (13%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63
           I+L   +   N+GS+ R    +G   + +  P    +  ++     +AGA + +  A + 
Sbjct: 131 IILDGITDAYNLGSILRTADAVGAHGVVI--PKRRAIGLNAAVSKASAGAIEYVPVARVT 188

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T++        +VGT     +   P     E  LK        PVALV G E  G+
Sbjct: 189 NISQTIEYLKKKNIWIVGTDL---SGEKPFF---EADLK-------GPVALVIGSEGEGM 235

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
                +KC + V I    + SSLN A+A  +I YE+R  
Sbjct: 236 GRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQ 274


>UniRef50_B0SDE0 rRNA methylase n=2 Tax=Leptospira biflexa serovar Patoc
           RepID=B0SDE0_LEPBA
          Length = 155

 Score = 78.3 bits (192), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 21/156 (13%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNAH--IV 63
           I L       N G++AR     G+  L +V  P      +A+  A    D   +      
Sbjct: 3   IALFRPEIPPNTGNIARLCVNAGVP-LSIVGEPAFDLSEKAVRRA--GLDYWKDLELHRY 59

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS-VAEAANTPVALVFGRERVGLTN 122
              D                 T    +    + G K     + ++    +FGRE  GL  
Sbjct: 60  PDWDWFQKE----------KETQGKRIFLVSKFGKKVYWDVSFSSKDVFLFGRETSGLP- 108

Query: 123 EELQK---CHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           EE+ K       ++I       S+NL+ AV +I YE
Sbjct: 109 EEIHKGHPSDQIISIPMAESSRSINLSNAVAIILYE 144


>UniRef50_C4ZI93 RNA methyltransferase, TrmH family, group 2 n=7 Tax=Firmicutes
           RepID=C4ZI93_EUBR3
          Length = 167

 Score = 78.3 bits (192), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 20/159 (12%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60
           +  + IVL E     N G++ R     G T L L+ PL      +A+  A        + 
Sbjct: 1   MAKLNIVLHEPEIPANTGNIGRTCVATG-TRLHLIEPLGFSLSEKALKRAGMDYWKDLDV 59

Query: 61  HIVDTLDEALA---GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
                 ++ L    G  +   T+           +P                 ++FG+E 
Sbjct: 60  TTYVDWEDFLERNPGAKIYYATTKGRHVYSDAHFEP--------------DCYIMFGKES 105

Query: 118 VGLTNEEL-QKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
            G+  E L +     + I    E  SLNL+ +V ++ YE
Sbjct: 106 AGIPEEILKEHPDECIRIPMIGETRSLNLSNSVAIVLYE 144


>UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZH71_PLALI
          Length = 262

 Score = 78.3 bits (192), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 17/150 (11%)

Query: 13  SHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH---IVDTLDE 68
               N+G+V RA    G+  +        P    A  ++AG  + I  A    +   L+ 
Sbjct: 126 QDPHNVGAVFRAAAFFGVRGIIATRDRSAPLSGTAYDVSAGGLESIPFAQPPNLARALEL 185

Query: 69  ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128
           A      V+GTS                     +  A+ P  +V G E  GL    L+ C
Sbjct: 186 AKKSGVWVLGTS-------------EHAQQPLSSIKADRPWLIVIGNEEGGLRRLTLELC 232

Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
                I +     SLN+++A  ++ Y +  
Sbjct: 233 DEVCTIPSQGAVGSLNVSVATGILLYALSR 262


>UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86
           Tax=Bacteria RepID=YACO_BACSU
          Length = 249

 Score = 78.3 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 21/165 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63
           ++L E     N+GS+ R    +G   + +  P    V   +     + GA + I  A + 
Sbjct: 100 LILDELEDPHNLGSIMRTADAVGAHGIVI--PKRRAVGLTTTVAKASTGAIEHIPVARVT 157

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   TL+E       VVGT A +R                     N P+ALV G E  G+
Sbjct: 158 NLARTLEEMKERGIWVVGTDASARE-------------DFRNMDGNMPLALVIGSEGKGM 204

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
                +KC + + +    + +SLN ++A  ++ YEV        E
Sbjct: 205 GRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE 249


>UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Actinomycetales
           RepID=D1A1M0_THECD
          Length = 289

 Score = 77.9 bits (191), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 59/180 (32%), Gaps = 23/180 (12%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGNAHIV 63
           VL      GN G+V R     G   +   +  V P +     A+  S     V+      
Sbjct: 121 VLAHVRDPGNAGTVLRTADAAGCDAVVFTDASVDPYNGKCVRASAGSLFHVPVVAGTR-F 179

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-----PVALVFGRERV 118
           +TL  AL  C L V             L     G  ++  A +      P A VFG E  
Sbjct: 180 ETLIGALRECGLTV-------------LAADGAGEHTLDAALDGGLLDRPTAWVFGNEAW 226

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL  E L+   + V +       SLNLA A  V  Y    A  A +        +     
Sbjct: 227 GLPEEILRAVDHVVRVPIYGRAESLNLATAAAVCLYASARAQRAGRAVPGAAPADGVSSA 286


>UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella
           RepID=C8NEH0_9LACT
          Length = 256

 Score = 77.5 bits (190), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 17/157 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV-DT 65
           IVL      GN+G++ R     G   + L    V   +  +  +   S    +  +    
Sbjct: 111 IVLDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLYNDKVLRSMQGSHF--HIPVFQAN 168

Query: 66  LDEAL---AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           L E L       + V  +A  R                      T VA+V G E  G+++
Sbjct: 169 LQEYLPILKEKGVQVAVTALHRDSK-----------DYSVLQGATDVAIVVGNEGQGVSD 217

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           + +      V I    +  SLN+++A  ++ Y+ +  
Sbjct: 218 DVIDLADVVVTIPIFGKAESLNVSIASALLMYKTKET 254


>UniRef50_B0TZX6 rRNA methyltransferase n=3 Tax=Francisella RepID=B0TZX6_FRAP2
          Length = 250

 Score = 77.5 bits (190), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
            +  +VL      GN+G++ R    +GLT + L++  V P + +AI    GA   +    
Sbjct: 101 DDFILVLDRIQDPGNIGTILRTAIAVGLTEIVLIDGTVDPFNPKAIRAGMGAQFSL-KFR 159

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             + L  A+         + + R + W +  P E       E   +   LVFG E  G+ 
Sbjct: 160 YFENL-SAVRNYP-----TLKERKI-W-LTTPHEGVSCYSEEFKLSNSVLVFGEEANGI- 210

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
            E+       + I       SLN+A A  +  +E
Sbjct: 211 -EDFSVGEKTM-IPTLSNIESLNVAQAATIYLFE 242


>UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes
           RepID=A6LPP3_CLOB8
          Length = 300

 Score = 77.5 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 21/162 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHIV 63
           ++L E     N+GS+ R  +  G+  + L  P        +     + GA + +  A + 
Sbjct: 154 VILDEVEDPHNLGSIVRTAELFGVHGIIL--PKRRSASVSTTVYKSSVGAIEHVKIAKVT 211

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T++E       + G   R+    + +                 P A++ G E  G+
Sbjct: 212 NLNSTIEELKEKGIWIYGADIRAEEYSYQV-------------DFGGPCAVIIGNEGRGI 258

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           +   ++KC   + I    + +SLN ++A  +I YEV    L 
Sbjct: 259 SKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGRLK 300


>UniRef50_A4SYT6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Polynucleobacter
           necessarius RepID=A4SYT6_POLSQ
          Length = 274

 Score = 77.5 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 19/153 (12%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTN-LWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
           ++L      GN+GS+ R     G T  L L        ++ +    GA  ++        
Sbjct: 130 VILDRVQDAGNVGSILRTAAAAGFTQVLALSGCAHLWSNKVLRAGMGAHRLLD------- 182

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN---TPVALVFGRERVGLTN 122
           L E  +   ++   +A       P+L         +    N    PVA V G E  G++ 
Sbjct: 183 LYEGWSNQQVLSAVTA-------PLLAATADAKCDLFSLKNDLLHPVAWVMGSEGQGVSE 235

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           + L +    ++I  +P   SLN++ A  +  +E
Sbjct: 236 DLLAQA-KGISIPIDPRVESLNVSTAAAICLFE 267


>UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM
           3991 RepID=A8R7Q7_9FIRM
          Length = 244

 Score = 77.5 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 13/153 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           I+L +    GN+G++ R+  + G   + L        S  +  +   +  + +  ++ T 
Sbjct: 104 ILLDDVQDPGNVGTILRSAYSFGFDTVVLSKHCADVYSDKVIRSTQGA--LFHMQVIRT- 160

Query: 67  DEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
                  S ++    + +    P++    E         A   VAL+FG E  G++ E L
Sbjct: 161 -----DLSQII---DQLKEKKIPVIGTALENASAMSTIEAVDRVALLFGNEGNGVSKELL 212

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
            KC   + I  +  + SLN+A+A  +  Y+ R 
Sbjct: 213 AKCDETMYIEMH-AFESLNVAVAAGIAMYKFRR 244


>UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W7H0_9CAUL
          Length = 272

 Score = 77.1 bits (189), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           + L +    GN+G++ R     G   + L+   V P S     A   S    +    D  
Sbjct: 129 VALEQVRDPGNLGTIIRTADAAGCGGVILIGDCVDPYSVEAVRATMGSVFAVSITRTD-- 186

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPR-ECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
            EA           A  +T P  ++  R +  +   +     P  ++ G E+ GLT++  
Sbjct: 187 PEAFL---------AWRKTWPGSVVGTRLDATVSHRSAVMQKPSLILMGNEQAGLTDQLA 237

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
             C  +V I       SLNLA+A  ++ Y
Sbjct: 238 AACDVNVKIPMRGRADSLNLAIATGIMVY 266


>UniRef50_B2SHA4 rRNA methyltransferase n=17 Tax=Bacteria RepID=B2SHA4_FRATM
          Length = 250

 Score = 77.1 bits (189), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 13/154 (8%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
            +  +VL      GN+G++ R    +GL  + L+N  V P + +AI    GA   +    
Sbjct: 102 DDFILVLDRIQDPGNIGTILRTAIAVGLKEVILINGTVDPFNPKAIRAGMGAQFSL-KFG 160

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            +  L E            A+ +     +  P +       E       LVFG E  G+ 
Sbjct: 161 YITNLAELKNI--------AKLQQRKIWLTTPHQGVSCYAKEFKLANSILVFGEEANGIE 212

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           +  + +      I    +  SLN+A A  +  +E
Sbjct: 213 DFSVGQKTM---IPTLSDIESLNVAQAATIYLFE 243


>UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (class)
           RepID=Q6AGD8_LEIXX
          Length = 277

 Score = 76.7 bits (188), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 6/153 (3%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67
           +L E    GN G++ RA  + G   + L    V   +  +  +   S       +   L 
Sbjct: 127 ILEEVRDPGNAGTIIRAADSAGADAVVLTGRTVDLYNPKVVRSTTGSLFHIPVAVGADLP 186

Query: 68  EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
           E ++        +A  R L   +        ++  + A  P A VFG E  GL +E L  
Sbjct: 187 EVVS-----CARAAGLRVLAADIAGEDLLAARTAGQLAR-PTAWVFGNEARGLPDEWLGL 240

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
               VA+       S+NLA A  V  YE   A 
Sbjct: 241 VDRAVAVPIYGRAESMNLATAASVCLYESAFAQ 273


>UniRef50_Q0IAI9 Predicted rRNA methylase n=25 Tax=Cyanobacteria RepID=Q0IAI9_SYNS3
          Length = 176

 Score = 76.7 bits (188), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 30/165 (18%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA--H 61
           +R+ L E     N G++AR     GL  L L+ PL    + + +  A    D   +    
Sbjct: 20  LRVALFEPRIPPNTGNIARTCAAFGLP-LDLIEPLGFSLEDRYLKRA--GLDYWPHVDLT 76

Query: 62  IVDTLD---EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           I   +D   E+LA  S V+G S R   L   M            E     V L+FGRE  
Sbjct: 77  IHKDVDAFFESLAQPSRVIGCSRRGGILLRNM------------EFQKGDV-LLFGREDT 123

Query: 119 GLTNEELQKCHYHVAI--AAN------PEYSSLNLAMAVQVIAYE 155
           GL      +CH    I    +          SLNL++A  +++++
Sbjct: 124 GLPETIRSRCHQITTISMPCSAGEDGQGGVRSLNLSVACAIVSHQ 168


>UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3
           Tax=Caulobacteraceae RepID=C5SHP3_9CAUL
          Length = 322

 Score = 76.7 bits (188), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 12/157 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI--ALAAGASDVIGNAHI 62
           + ++L + +   N+G++ R     G   L +      P  Q +    AAGA D +  A +
Sbjct: 166 VLVMLDQVTDPQNIGAILRTCAAFGAAGLIM-QDRHSPVMQGVLAKTAAGAMDRVPFARV 224

Query: 63  VDTLDEALAGCS----LVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            + L  AL   +    + +G +  +      +L+ +          +   + +V G E  
Sbjct: 225 TN-LSRALESLTENGFVSLGMAGEAEHSLQAVLEQQG----WRQAGSPRALVIVMGSEGE 279

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           GL     + C + V I     + SLN++ A  +  YE
Sbjct: 280 GLRRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYE 316


>UniRef50_A9M3B4 tRNA/rRNA methyltransferase n=58 Tax=Proteobacteria
           RepID=A9M3B4_NEIM0
          Length = 157

 Score = 76.3 bits (187), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 21/166 (12%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGN 59
           M+    IVL +     N G++ R     G  +L LV PL  P DS  +  A        +
Sbjct: 1   MIFMFTIVLYQPEIPPNTGNIIRLCANTG-ADLHLVKPLGFPLDSAKMKRAGLDYHEFAS 59

Query: 60  AHIVDTLDE---ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
             + +  D+   ALAG  +   T+            P E   +         V L+FG E
Sbjct: 60  LTVYENFDDCLKALAGRRIFALTT-------KGTARPDETAFQ------KGDV-LLFGPE 105

Query: 117 RVGLTNEELQK--CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             GL  + L        + +   P   S+NL+  V VI +E     
Sbjct: 106 TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQH 151


>UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fusobacteriaceae
           RepID=D1AKE9_SEBTE
          Length = 256

 Score = 76.3 bits (187), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 17/155 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           ++L +    GN+G++ R M+  G  NL L    V   +     A     +  +  I +T 
Sbjct: 109 VILDDVQDPGNIGTIIRTMEASGFKNLILTKGSVDVYNPKTVRATMGG-IFKSNIIYETP 167

Query: 67  D---EALAGCSL-VVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           +   E L   +  V+ T      L    +D R+  LK          A +FG E  G+++
Sbjct: 168 ERITEFLKDNNYQVIST-----LLDKNSIDYRDVELK-------EKNAYIFGNEGHGISD 215

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
             ++       I    +  SLN+++A  +  Y++R
Sbjct: 216 IFIESTDIKAIIPIYGDVDSLNVSVASGIFLYKMR 250


>UniRef50_C2BWX1 TrmH family rRNA methyltransferase n=3 Tax=Mobiluncus
           RepID=C2BWX1_9ACTO
          Length = 275

 Score = 76.3 bits (187), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 13/154 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           + ++L  T   GN+G++ R     G + +++        S  +  A+  S          
Sbjct: 123 LALILPATQDPGNVGTLIRLADACGASTVFMGQDCADATSPKVIRASVGSVFHVPTPRFQ 182

Query: 65  TLDEALAGCS----LVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            L   +         +VGTS         ML P   G  S     N  VA V G E  GL
Sbjct: 183 DLAAVVKALRSEGWTIVGTS----LSGDVMLTPVTAGTWS-----NKKVAWVMGNEAHGL 233

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
              E   C   V+I       SLN+  A  +  +
Sbjct: 234 DATEESWCDVLVSIPMFGRAESLNVTSAATLCLW 267


>UniRef50_C0YVQ1 Possible TrmH family rRNA methyltransferase n=1
           Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ1_9FLAO
          Length = 255

 Score = 76.3 bits (187), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 17/154 (11%)

Query: 6   RIVLVE-TSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIG--NAH 61
            +++VE     GN+G++ R+ +  G+  L + +      +   I  + G    +    A 
Sbjct: 108 TVIIVEGVEKPGNLGAILRSCEAFGIDALIVADGKTDFYNPNVIRSSVGCLFGMEVYQAE 167

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             +TL E L   S  + T+              E              A++FG E  GL+
Sbjct: 168 NKETL-EFLQKNSFNIYTT-----------LMDESAEDLYKRDFRQRSAVLFGTEHSGLS 215

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
           +  + K    + I       SLNL+ AV +  YE
Sbjct: 216 DFWIGKGKNTL-IPMAGSIDSLNLSNAVAITCYE 248


>UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3
          Length = 384

 Score = 76.3 bits (187), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 21/161 (13%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAH 61
           + I++   +   N+G++ R  +  G   + L  P        S  + +AAGA +    A 
Sbjct: 218 VLIIIDSITDPHNLGAIIRTAEAFGAQGMVL--PQRRVAGITSTVMKVAAGALEHFPVAR 275

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L+        + GT A  +T                      P+ LV G E  
Sbjct: 276 VVNLSRALETLKESGFWIYGTVAGKQT-------------ALHQADLREPMGLVIGSEGE 322

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           GL+    + C + + I    +  SLN ++A  +  YE+   
Sbjct: 323 GLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQ 363


>UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum
           ATCC 49989 RepID=C7H0N3_9FIRM
          Length = 297

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 18/162 (11%)

Query: 2   LQNIR------IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS 54
           L +IR      +VL       N+G++ R  +  G+  + +              ++ GA 
Sbjct: 140 LADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAI 199

Query: 55  DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFG 114
             I    +V  L  AL           + R   W +      G     +     VALV G
Sbjct: 200 FSIP-CIMVTNLAAALKDL--------KQRGF-W-VYAADANGDSCFEQEFGGSVALVLG 248

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
            E  G++   L +  Y V+I    ++ SLN+++A  ++ YE+
Sbjct: 249 NEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEI 290


>UniRef50_Q2RHA9 RNA methyltransferase TrmH, group 2 n=2 Tax=Bacteria
           RepID=Q2RHA9_MOOTA
          Length = 155

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63
           + +VL +     N G++AR     G T L L++PL    D + +  A    D     +I+
Sbjct: 3   LHVVLYQPEIPQNTGNIARTCALTG-TFLHLIHPLGFRLDEKHLKRA--GLDYWEEVNIL 59

Query: 64  DT-----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +        EA    +    ++   R        P +               LVFG E  
Sbjct: 60  EHSTWAAFREAYPDANCYYLSTKGQRRYTKVDYRPDDF--------------LVFGPETR 105

Query: 119 GLTNEELQKC-HYHVAIAANPEYSSLNLAMAVQVIAYE 155
           GL    L+      + +   P   SLNLA +V ++ YE
Sbjct: 106 GLPASILEPAGDRVLRVPMRPGLRSLNLANSVAIVLYE 143


>UniRef50_C6P4R4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sideroxydans
           lithotrophicus ES-1 RepID=C6P4R4_9PROT
          Length = 186

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 60/174 (34%), Gaps = 25/174 (14%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65
           ++L +     N G+V R     G  +L L+ PL    D + +  A        +  + DT
Sbjct: 4   VILYQPEIPPNTGNVIRLCANTG-AHLHLIRPLGFDLDDKNLRRAGLDYHEYASVRVYDT 62

Query: 66  LDEALAGCSLVVGTSARSRTLPWP-----MLDPRECGLKSVAEAANTPV----------- 109
           L E L    L    +A     P P      +  RE      A A  T             
Sbjct: 63  LVECLDTLPLA---TALPHPNPPPGGEGTSVSLRELADTRRAFAFTTKGSHPFNEVRYQP 119

Query: 110 --ALVFGRERVGLTNEELQKC--HYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
             A +FG E  GL  E L        + +   P+  SLNL+  V V  YE    
Sbjct: 120 GDAFLFGPESRGLPAEVLAAFVPERRLRLPMLPDNRSLNLSNTVAVTVYEAWRQ 173


>UniRef50_C7RTK9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1
           RepID=C7RTK9_9PROT
          Length = 272

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 49/167 (29%), Gaps = 16/167 (9%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD--SQAIALAAGASDVIGNAHIV 63
            +VL      GN+GS+ R+    G     L++P        + +  A GA   +      
Sbjct: 118 TVVLDGVQDPGNVGSILRSAAAAGFRQ-ILLSPDCAQAWAPKTLRAAMGAHFQLDVLEHC 176

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L   L+                 P+                 PVA VFG E +G+   
Sbjct: 177 D-LPAFLSA------------YRGQPVATLLGASTSLYGADLAGPVAWVFGSEGLGVRPA 223

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV 170
                   V I       SLN+A A  V  +E               
Sbjct: 224 VAALTRLQVRIPMPGPSESLNVAAAAAVCLFETVRRRQTEASPSRVA 270


>UniRef50_Q4DUL2 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi
           RepID=Q4DUL2_TRYCR
          Length = 392

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 17/184 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK--------PDSQAIALAAGASD 55
            + + +       N+G + RA+   G + L      +          D+QA   ++    
Sbjct: 169 RVFVAVENPKTPANLGGILRAIGCFGYSGLIFSGTRLLAALKHRPVTDTQAAGFSSPYVA 228

Query: 56  VIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLD-PRECGLKSVAEAANTP-----V 109
           +    ++ + L+ A +  ++VV         P P+   P    L   A   +       V
Sbjct: 229 IPDITNLFEVLEGATSFEAVVVAVDMIDGATPLPLYRHPCLHALDGGARKRSRCTLPNLV 288

Query: 110 ALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ 169
             +FG E   +  E L +CH  V +       SLNLA AV V+ Y+   A      + + 
Sbjct: 289 VYLFGPEDGSIRQEVLARCHSAVFLPT---QGSLNLAAAVNVVLYDRCAAQWRLTASDDD 345

Query: 170 VEHE 173
           V  +
Sbjct: 346 VTAK 349


>UniRef50_D1YDL1 RNA methyltransferase, TrmH family n=2 Tax=Propionibacterium acnes
           RepID=D1YDL1_PROAC
          Length = 271

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 14/155 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS----DVIGN 59
            + ++  +    GN G+V R     G   + L    V P +     ++  S     V+  
Sbjct: 119 RLAVICAQVRDPGNAGTVIRCADAFGADCVILTRGSVDPHNPKTVRSSVGSIFHLPVVVG 178

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             + D ++ A      V+   A        ++        + +     P+A + G E  G
Sbjct: 179 VELADAVEWAHQHQMSVLA--ADGGGHSLDVV--------ARSGCLKRPIAWLMGNEAWG 228

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAY 154
           L   +       V +       SLNL+ A  V+ Y
Sbjct: 229 LPEADRALADEIVGVPMWGAAESLNLSTAAAVVLY 263


>UniRef50_Q9SUL3 OBP33pep like protein n=16 Tax=Viridiplantae RepID=Q9SUL3_ARATH
          Length = 278

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 31/161 (19%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            +V+   +   N+G++AR+    G+T L LV         A      AS +        +
Sbjct: 7   YVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDF---NAFGSHGSASHI--RFRHFHS 61

Query: 66  LDEAL------AGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           L EA         C  + G            ++  +              A + G E  G
Sbjct: 62  LIEARNYLKEEKDCD-ICG------------VEIADGASAVNEHPFKRNTAFLLGNEGSG 108

Query: 120 LTNEELQKCHYHVAIAANPEYS----SLNLAMAVQVIAYEV 156
           L+ +E + C + V I    +Y     SLN+ +A  ++ +  
Sbjct: 109 LSAKEYEICDFFVYIP---QYGCGTASLNVTVAASIVLHHF 146


>UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MRI6_9FIRM
          Length = 262

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 12/153 (7%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHIVDT 65
           I+L      GN+G++ R+     +  + L          + +  A G+   +   +  DT
Sbjct: 118 IILENLQDMGNIGTIIRSCDAFSIDGVILAGDCADVFAPKTVRSAMGSLFRLP-IYCCDT 176

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
            +EA+        T  +         +  +  ++   E      A+V G E  G+++   
Sbjct: 177 -EEAI--------TLLQKGGFTVYSAELSDRSVRLGEEKLPQKTAVVIGNEGNGVSDTVK 227

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           + C   + I  +    SLN ++A  VIA+E+  
Sbjct: 228 KLCDKSLFIPISSA-ESLNASVAASVIAWEMSK 259


>UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2
           Tax=Archaeoglobaceae RepID=Y2399_ARCFU
          Length = 224

 Score = 75.9 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 12/152 (7%)

Query: 9   LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIVDTLD 67
           L       N+G+  R  +  G   + L    V      A+  +AGA   I  A + +   
Sbjct: 82  LDNVVDQRNIGACIRTAEFFGAAGVVLPKRRVGSIQEGAVKASAGAVFHIPIARV-ENFA 140

Query: 68  EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
            A+     +  T+          L     G    A +   P A+V G E  G++    ++
Sbjct: 141 SAIKKLKKLGFTT----------LAADLDGEDLEAVSLLLPAAVVIGGEDRGVSRPVKKQ 190

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           C + V I    + +SLNL++A  +  Y +   
Sbjct: 191 CDFVVKIPGVGKVNSLNLSVAAGIFLYTLSRQ 222


>UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synechococcus
           RepID=Q2JVF6_SYNJA
          Length = 270

 Score = 75.6 bits (185), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 9/155 (5%)

Query: 10  VET-SHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68
           VET    GN+GS+ R +   G   LWL    V P++  +  A+          ++  L  
Sbjct: 119 VETLQDPGNLGSLIRVVAATGADGLWLSADSVDPENPKVLRASAGQWFRRPPQVLSDLPA 178

Query: 69  ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128
            +  C        R + +                     P   + G E  GL    +Q  
Sbjct: 179 WIQSC--------RRQGIQVLAATLAPLATCYWDHDLTRPTLFLLGNEGAGLQESTIQLA 230

Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
              V I       SLN+AM   ++ YE      A 
Sbjct: 231 DAQVRIPMAAGVESLNVAMTGGLLLYEALRQQRAQ 265


>UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
           12042 RepID=B9Y9V6_9FIRM
          Length = 244

 Score = 75.6 bits (185), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 17/156 (10%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS--DV-IGNAHI 62
            +VL      GN+G++ R     G   + L        ++    +   +   + I    +
Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISRTEL 160

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           +  L+E       V+GT               +          +  +A+V G E  G+  
Sbjct: 161 IPALNELKELGVTVIGT-------------ALQGAQPLSELPVSENIAVVLGNEGQGIRP 207

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
             L  C     I  +  + SLN+A+A  +  Y  R 
Sbjct: 208 ATLDICDQRALIEMS-SFESLNVAVAAGICLYRYRR 242


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   296   6e-79
UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8 ...   286   6e-76
UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2 ...   280   4e-74
UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   278   1e-73
UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH famil...   278   2e-73
UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase ...   278   2e-73
UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacter...   272   6e-72
UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4G...   272   9e-72
UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 ...   268   2e-70
UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 ...   266   4e-70
UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7 ...   261   2e-68
UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Pro...   258   2e-67
UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2 ...   255   1e-66
UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidith...   254   1e-66
UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobac...   254   2e-66
UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM...   252   7e-66
UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 ...   251   1e-65
UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 ...   251   1e-65
UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2 ...   251   2e-65
UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 ...   249   4e-65
UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rick...   249   8e-65
UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chro...   249   9e-65
UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 ...   248   1e-64
UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 ...   248   1e-64
UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9 ...   247   3e-64
UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus a...   246   4e-64
UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella...   246   6e-64
UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3 ...   245   8e-64
UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 ...   244   2e-63
UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1 ...   244   2e-63
UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI03...   243   3e-63
UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 fami...   243   3e-63
UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34...   242   7e-63
UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 ...   241   1e-62
UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1 ...   241   2e-62
UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30...   241   2e-62
UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulo...   240   3e-62
UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 ...   240   3e-62
UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacte...   238   1e-61
UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobactera...   238   1e-61
UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepI...   238   2e-61
UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2 ...   236   4e-61
UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 ...   235   9e-61
UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 ...   234   2e-60
UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 68...   234   2e-60
UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Bur...   233   3e-60
UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 ...   231   2e-59
UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   228   1e-58
UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultur...   228   1e-58
UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 ...   228   2e-58
UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales...   228   2e-58
UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11...   228   2e-58
UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   227   2e-58
UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 ...   227   2e-58
UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodo...   227   2e-58
UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2 ...   227   2e-58
UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25...   227   3e-58
UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular or...   225   9e-58
UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samp...   224   3e-57
UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group...   223   4e-57
UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gamma...   223   6e-57
UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magne...   221   1e-56
UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella Re...   221   2e-56
UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 ...   221   2e-56
UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2N...   221   2e-56
UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine ...   220   4e-56
UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 7...   219   5e-56
UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1 ...   219   9e-56
UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 ...   219   9e-56
UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 ...   218   2e-55
UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torq...   218   2e-55
UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 ...   218   2e-55
UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 ...   217   2e-55
UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter s...   216   5e-55
UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonad...   216   7e-55
UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 ...   216   7e-55
UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvula...   216   8e-55
UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhod...   215   1e-54
UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alph...   215   1e-54
UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia Re...   215   1e-54
UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseria...   214   1e-54
UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1 ...   213   4e-54
UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 ...   212   7e-54
UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 ...   212   9e-54
UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul...   212   1e-53
UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus L...   211   1e-53
UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Dein...   211   2e-53
UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular or...   211   2e-53
UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Eur...   210   3e-53
UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Coma...   210   4e-53
UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2 ...   208   1e-52
UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 ...   207   2e-52
UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Syne...   205   1e-51
UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3 ...   204   3e-51
UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Proc...   203   4e-51
UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ14...   203   4e-51
UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingob...   202   6e-51
UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=unc...   202   1e-50
UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas ...   202   1e-50
UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Proc...   201   1e-50
UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O7402...   200   3e-50
UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirsc...   200   3e-50
UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hypho...   199   1e-49
UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri Rep...   197   2e-49
UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermo...   196   4e-49
UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 ...   196   5e-49
UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pe...   196   5e-49
UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacte...   195   1e-48
UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acido...   194   3e-48
UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia ...   194   3e-48
UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 ...   193   4e-48
UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo...   193   4e-48
UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido...   193   5e-48
UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alpha...   191   1e-47
UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Nat...   191   3e-47
UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chlor...   190   4e-47
UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cysto...   189   7e-47
UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidar...   189   8e-47
UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=...   188   2e-46
UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 ...   188   2e-46
UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5 ...   186   6e-46
UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamc...   185   1e-45
UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT...   184   2e-45
UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bra...   184   2e-45
UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 ...   184   3e-45
UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepI...   183   4e-45
UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DS...   182   7e-45
UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM...   182   7e-45
UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeo...   178   1e-43
UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entam...   176   5e-43
UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 ...   175   1e-42
UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus...   172   1e-41
UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacter...   171   2e-41
UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cysto...   170   3e-41
UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12...   170   5e-41
UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10...   169   6e-41
UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 ...   169   8e-41
UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT...   169   8e-41
UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusi...   168   1e-40
UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer...   167   3e-40
UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 ...   167   4e-40
UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family prot...   166   6e-40
UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale...   162   7e-39
UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro...   162   1e-38
UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Ta...   161   2e-38
UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 ...   161   2e-38
UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD...   160   4e-38
UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=...   160   5e-38
UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Trepo...   159   5e-38
UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ...   159   8e-38
UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35...   159   9e-38
UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens ...   159   1e-37
UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 ...   158   1e-37
UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase...   158   2e-37
UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...   157   3e-37
UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0...   157   4e-37
UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 ...   156   5e-37
UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51...   156   5e-37
UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignic...   156   5e-37
UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ...   156   6e-37
UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase...   155   8e-37
UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac...   154   2e-36
UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid...   154   2e-36
UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14...   154   2e-36
UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   154   2e-36
UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ...   154   2e-36
UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto...   154   2e-36
UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe...   154   3e-36
UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ...   154   3e-36
UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyr...   154   3e-36
UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ...   154   3e-36
UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21...   154   3e-36
UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase...   153   4e-36
UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase...   153   6e-36
UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ...   152   7e-36
UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus...   152   1e-35
UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ...   152   1e-35
UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther...   151   1e-35
UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put...   151   1e-35
UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomon...   151   2e-35
UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan...   151   2e-35
UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   150   4e-35
UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   150   4e-35
UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   150   5e-35
UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ...   150   5e-35
UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   149   7e-35
UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu...   149   9e-35
UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida...   149   1e-34
UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil...   149   1e-34
UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor...   149   1e-34
UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   148   1e-34
UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ...   148   2e-34
UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera...   148   2e-34
UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill...   148   2e-34
UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost...   147   2e-34
UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ...   147   2e-34
UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio...   147   3e-34
UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyano...   147   3e-34
UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac...   146   5e-34
UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ...   146   5e-34
UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm...   146   6e-34
UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio...   146   7e-34
UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri...   146   7e-34
UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra...   146   7e-34
UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro...   145   9e-34
UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ...   145   1e-33
UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro...   145   1e-33
UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein...   145   1e-33
UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ...   145   1e-33
UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi...   145   1e-33
UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neiss...   145   1e-33
UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt...   144   2e-33
UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ...   144   2e-33
UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacill...   144   3e-33
UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero...   144   3e-33
UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hypho...   144   3e-33
UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto...   144   3e-33
UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ...   144   3e-33
UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1...   144   3e-33
UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ...   144   3e-33
UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1...   144   3e-33
UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema...   144   4e-33
UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12...   143   5e-33
UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine...   143   5e-33
UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot...   143   6e-33
UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanell...   143   6e-33
UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph...   143   6e-33
UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ...   143   6e-33
UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales...   142   7e-33
UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ...   142   1e-32
UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ...   142   1e-32
UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ...   141   2e-32
UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group...   141   2e-32
UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ...   141   2e-32

Sequences not found previously or not previously below threshold:

UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm...   154   3e-36
UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe...   149   6e-35
UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri...   148   1e-34
UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   148   1e-34
UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri...   148   2e-34
UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re...   148   2e-34
UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ...   146   5e-34
UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI...   145   1e-33
UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ...   145   1e-33
UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri...   145   1e-33
UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ...   145   2e-33
UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ...   142   9e-33
UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm...   142   1e-32
UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ...   142   1e-32
UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm...   141   2e-32
UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci...   141   2e-32

>UniRef50_Q0TEV3 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=189
           Tax=Proteobacteria RepID=TRMJ_ECOL5
          Length = 246

 Score =  296 bits (758), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 245/246 (99%), Positives = 246/246 (100%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA
Sbjct: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           HIVDTLDEALAGCSLVVGTSARSRTLPWP+LDPRECGLKSVAEAANTPVALVFGRERVGL
Sbjct: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPILDPRECGLKSVAEAANTPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV
Sbjct: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN
Sbjct: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240

Query: 241 KGNKAE 246
           KGNKAE
Sbjct: 241 KGNKAE 246


>UniRef50_B3PDK4 RNA methyltransferase, TrmH family, group 1 n=8
           Tax=Gammaproteobacteria RepID=B3PDK4_CELJU
          Length = 286

 Score =  286 bits (732), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 137/240 (57%), Positives = 165/240 (68%), Gaps = 1/240 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
             NIRIVLV TSH GN+G  ARAMK MGL  L+LV P   P  +A+  AAGA+DV+ NA 
Sbjct: 9   FANIRIVLVNTSHPGNIGGAARAMKNMGLDRLYLVAPKEYPSDKAVWRAAGATDVLDNAV 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +V+TLDEA+AGCSLVVGTSAR R +PWP+LDPR+CG    AEA    VA+VFGRE  GLT
Sbjct: 69  VVETLDEAIAGCSLVVGTSARERRIPWPLLDPRQCGESIWAEAGEHEVAVVFGREDRGLT 128

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV-EHEETPYPLV 180
           NEEL KC YHV I AN EYSSLNLA AVQVI YE+RMA+L   E       H + P    
Sbjct: 129 NEELHKCTYHVHIPANAEYSSLNLATAVQVICYEIRMAYLQAVEGKSLPNHHWDMPPADA 188

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE +Y HLEQ L+  GF+  ++P Q M +LRRL+ R R +  ELNILRG+L +++   
Sbjct: 189 GALENYYQHLEQALVDLGFLDPDNPKQTMTRLRRLYNRVRLDQMELNILRGVLTAMQNYV 248


>UniRef50_Q080P3 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Gammaproteobacteria RepID=Q080P3_SHEFN
          Length = 240

 Score =  280 bits (716), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 158/244 (64%), Positives = 186/244 (76%), Gaps = 4/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR+VLV TSH GN+GS ARAMKTMGL+NL+L  P  +PD Q+IALAAGASD++ N 
Sbjct: 1   MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRAEPDGQSIALAAGASDILKNL 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE GLK   E+ N PVA+VFGRE  GL
Sbjct: 61  TRVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGLKLTQESLNGPVAIVFGRENHGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +NEELQKC YHVAI ANPEYSSLNLA AVQ+I YE R+A LA  E     +     YPL 
Sbjct: 121 SNEELQKCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQTETPAVTD----EYPLT 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +LERF+ HLE TL  TGF+ +NHPGQVM KLRRL+TRAR E+ E+NILRGIL SI+++ 
Sbjct: 177 SELERFFVHLESTLSKTGFVIKNHPGQVMTKLRRLYTRARIEAPEMNILRGILTSIDKKM 236

Query: 241 KGNK 244
               
Sbjct: 237 DKQD 240


>UniRef50_Q1C5G8 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=57
           Tax=Gammaproteobacteria RepID=TRMJ_YERPA
          Length = 257

 Score =  278 bits (711), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 198/242 (81%), Positives = 218/242 (90%), Gaps = 1/242 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLVETSHTGNMGS ARAMKTMGLTNL+LVNPLVKPDSQAIAL+AGASDVIG A
Sbjct: 1   MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGKA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDTLDEALAGCSLVVGTSARSRTLPWPML+PRECG++S  EA + PVALVFGRERVGL
Sbjct: 61  TIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-NGEQVEHEETPYPL 179
           TN+ELQKCHYHVAI ANPEYSSLNLAMAVQ++AYEVR+A+L  Q+ N    E EE PYPL
Sbjct: 121 TNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAYLDRQQANAPVEEEEEAPYPL 180

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           VDDLERFY HLEQ L  +GFIR+ HPGQ+M+KLRRLFTRARPE+QELNILRG+L SIE+Q
Sbjct: 181 VDDLERFYQHLEQVLSHSGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQ 240

Query: 240 NK 241
           +K
Sbjct: 241 DK 242


>UniRef50_Q3IFI1 Putative tRNA/rRNA methyltransferase (TrmH family) n=2
           Tax=Alteromonadales RepID=Q3IFI1_PSEHT
          Length = 241

 Score =  278 bits (711), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 155/242 (64%), Positives = 186/242 (76%), Gaps = 2/242 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +IR+VLV TSH+GN+GS ARAMKTMGL+ L+LV+P  + DS A ALAAGASDV+GNA
Sbjct: 2   ILDDIRVVLVNTSHSGNIGSAARAMKTMGLSKLYLVDPACEIDSHASALAAGASDVLGNA 61

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVDT+ +A+A C+L +GTSARSRTL WPM++PRECG K V+EA N PVALVFGRE  GL
Sbjct: 62  VIVDTVADAIADCALTIGTSARSRTLSWPMVEPRECGEKLVSEAVNGPVALVFGRENSGL 121

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N+ELQ C+YHV I ANPEYSSLNLAMAVQ + YE RMA+L  Q   +  E ++T YP  
Sbjct: 122 SNDELQLCNYHVCIPANPEYSSLNLAMAVQTLCYETRMAFLNQQP--KIAEEDDTVYPSS 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
              E FYGHLE+TL  TGFI + HPG VM KLRR+F RARPE  E+NILRGIL SI +  
Sbjct: 180 KQTELFYGHLEETLFNTGFIIKQHPGMVMTKLRRMFNRARPEDAEMNILRGILTSINKSI 239

Query: 241 KG 242
             
Sbjct: 240 PK 241


>UniRef50_Q7N222 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ n=70
           Tax=Gammaproteobacteria RepID=TRMJ_PHOLL
          Length = 241

 Score =  278 bits (711), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 178/242 (73%), Positives = 210/242 (86%), Gaps = 1/242 (0%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRI+LVETSHTGNMGS ARAMKTMGLTNL+LVNPLV+PDS AIAL+AGASDVIG+A
Sbjct: 1   MLENIRIILVETSHTGNMGSTARAMKTMGLTNLYLVNPLVQPDSHAIALSAGASDVIGHA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IVD+LD+ALAGC LV+GTSARSRTL WPM++PRECG +SV +A +  VA+VFGRERVGL
Sbjct: 61  TIVDSLDKALAGCGLVIGTSARSRTLSWPMVEPRECGERSVQQAEHASVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQKCHYH+ I  NPEY SLNLAMAVQ+++YE+RMA+LA Q+  EQ + +E  YPL 
Sbjct: 121 TNEELQKCHYHLNIPTNPEYGSLNLAMAVQLVSYEIRMAYLARQDKTEQ-KTDEVEYPLA 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           DD+ERFY HLE  L  +GFIR+ HPGQ+MN+LRRLFTRARPE QELNILRGIL+S+E+  
Sbjct: 180 DDMERFYHHLECVLNDSGFIRKAHPGQIMNRLRRLFTRARPEMQELNILRGILSSVEKWA 239

Query: 241 KG 242
           K 
Sbjct: 240 KK 241


>UniRef50_Q5ZUP6 RNA methyltransferase n=11 Tax=Gammaproteobacteria
           RepID=Q5ZUP6_LEGPH
          Length = 257

 Score =  272 bits (697), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 123/245 (50%), Positives = 166/245 (67%), Gaps = 3/245 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +IRIVLV TSH GN+GS ARAMKTMGL+ L+LVNP   PD +A  +AAGA DV+  A 
Sbjct: 3   LSSIRIVLVSTSHPGNIGSTARAMKTMGLSTLYLVNPKSFPDLKAKEMAAGADDVLDAAV 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + +TLDEAL GC L++GTSAR R L  P L P  C      ++ NT VA+VFGRE  GLT
Sbjct: 63  VTNTLDEALIGCQLILGTSARPRGLSLPGLIPASCAELINQQSGNTQVAIVFGREHAGLT 122

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL KCHYH+ I +NPEYSSLNLA AVQ+IAYE+RM  L+      QV          D
Sbjct: 123 NEELLKCHYHINIPSNPEYSSLNLAQAVQIIAYELRMKLLSP---SAQVALRNEEPATAD 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           ++E+FY HL++  +   F++ ++P ++M ++RRLF R   E  E++ILRG+L+ +++  +
Sbjct: 180 EIEQFYEHLKEVFIEINFLKPSNPRRLMQRVRRLFNRINLEKMEVSILRGMLSQVQKSLE 239

Query: 242 GNKAE 246
             + +
Sbjct: 240 WARKD 244


>UniRef50_A4GHV6 RNA methyltransferase n=2 Tax=Bacteria RepID=A4GHV6_9BACT
          Length = 249

 Score =  272 bits (696), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 3/242 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  ++IVLV T+H GN+G+ ARAMK MG   L LV P   P   A   +  A D++  A
Sbjct: 11  LLDTVKIVLVGTTHPGNIGAAARAMKNMGFRKLILVEPKEFPSDVATYRSKAAKDILEEA 70

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I +TL++A+A C LV+GTSAR R +PWP+L+P+E     V       VALVFGRE  GL
Sbjct: 71  EIFNTLEQAVADCELVIGTSARDRKVPWPILNPKESAETVVKNLPQQKVALVFGREDRGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL  C++HV I  +P+YSSLNLA AVQ++ YE+R+A L+  E+     + +      
Sbjct: 131 TNEELGLCNFHVHIPTDPDYSSLNLAQAVQILVYEIRVASLSDTEDKN---YWDVELANT 187

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
              E    H+++ +    F   ++P +++ ++RR F R+  +  E NI RG+ A+I+++ 
Sbjct: 188 QQTEMLINHMDELMQQVEFYDVDNPRKLLLRVRRFFKRSNIDVMEANIFRGLFATIQKKL 247

Query: 241 KG 242
           K 
Sbjct: 248 KQ 249


>UniRef50_C7RCC9 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7RCC9_KANKD
          Length = 277

 Score =  268 bits (685), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 116/260 (44%), Positives = 160/260 (61%), Gaps = 18/260 (6%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L +I+IVL +TSH GN+G+ ARAMKTMGL +L LV P   P  +A+  ++GA DV+ NA
Sbjct: 15  LLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VDT++EALA C L++GTS+R+R LPWP+++PRE G          PVA++FGRE  GL
Sbjct: 75  QVVDTVEEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEARPVAIMFGRESTGL 134

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------------------ 162
            NEELQ CHYHV I ANPEY SLNLA AVQ+IAYE+R+A                     
Sbjct: 135 LNEELQLCHYHVNIPANPEYMSLNLASAVQLIAYEIRLASKMIAEIVRKDSQPVDAELGY 194

Query: 163 TQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPE 222
             +   + + E       ++++  Y HLE T+  T F     P  +  ++RR+  +AR  
Sbjct: 195 DAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLLPARIRRILAKARLN 254

Query: 223 SQELNILRGILASIEQQNKG 242
             E+NILRG L+SI++  K 
Sbjct: 255 KGEVNILRGFLSSIDKYIKR 274


>UniRef50_C0N7P7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methylophaga
           thiooxidans DMS010 RepID=C0N7P7_9GAMM
          Length = 253

 Score =  266 bits (682), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + NIR VLV T+H GN+G+ ARAMKTMGL+NL LV+P + P ++A A A+GA D++  A 
Sbjct: 15  MDNIRFVLVGTTHPGNIGAAARAMKTMGLSNLHLVSPKLYPSAEATARASGADDILHTAQ 74

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + D+LDEAL GC      SAR R LP P+++PR+   +      NT +A+VFGRE  GL+
Sbjct: 75  VHDSLDEALVGCHHAFAMSARLRHLPVPVVNPRQAVEQLEKFDDNTHIAIVFGREHSGLS 134

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEEL +C Y + I ANP+YSSLNLA AVQV+AYE++M++    + G   E  E      D
Sbjct: 135 NEELDRCQYLINIPANPDYSSLNLAAAVQVLAYELKMSFQPQIDFGRIGEQRE--AITND 192

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           DL   Y H E++L   GF+   +P  +M +++RLF RA  +  EL+I+ GIL + E + K
Sbjct: 193 DLAHLYDHFERSLTTIGFLDPENPRHLMRRIKRLFNRADLDKNELHIMHGILRAAETKAK 252


>UniRef50_A6VX19 RNA methyltransferase, TrmH family, group 1 n=7
           Tax=Gammaproteobacteria RepID=A6VX19_MARMS
          Length = 260

 Score =  261 bits (667), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 4/241 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVL+ T H GN+G++ARAMK MGLTNL+LV+P   P  +A + AAGA D++ NA
Sbjct: 1   MLSNIRIVLINTFHPGNVGAIARAMKNMGLTNLYLVDPNDYPSEEATSRAAGAVDLLENA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IV TL+EA+A CSLV+GTSAR RT   P+++ REC    + EA +  VA+VFGRE  GL
Sbjct: 61  TIVSTLEEAIADCSLVIGTSARHRTFQLPIMNARECAESVIPEAVDHNVAIVFGRETTGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N+E+ +CH  V I AN EY  LN++ AVQ++ YE+ MA     +N E  + E   YP  
Sbjct: 121 LNDEIAQCHRQVYIDANDEYPVLNISQAVQIVTYEIWMA----NQNKENYKKETPEYPHK 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            D++ FY HLE+TL    FI  +HPG+V++KL R F R+RPE QEL ILRG+LA+++++ 
Sbjct: 177 KDMDLFYEHLEETLYGINFIIRSHPGKVLDKLHRFFNRSRPEKQELGILRGVLAAVQREA 236

Query: 241 K 241
            
Sbjct: 237 G 237


>UniRef50_Q2YB91 RNA methyltransferase TrmH, group 1 n=10 Tax=Proteobacteria
           RepID=Q2YB91_NITMU
          Length = 267

 Score =  258 bits (659), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 115/244 (47%), Positives = 149/244 (61%), Gaps = 4/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  +RIVL  TSH GN+G  ARAMKTMGL +L+LVNP   PD +A   A GA D++  A
Sbjct: 24  LLDKVRIVLSHTSHPGNIGGAARAMKTMGLDSLYLVNPRFFPDKEAERRATGALDILHKA 83

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + DTLDEAL+G  L    +AR R L   + D R+   K +  A    VALVFG E  GL
Sbjct: 84  KVCDTLDEALSGTVLAAAVTARQRDLSHEVFDGRQGATKLLDLAQKDFVALVFGTEMSGL 143

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----HEETP 176
           T  E+ KC   + I ANPEYSSLNLA AVQV+AYE+RMA     E          H    
Sbjct: 144 TTLEVSKCQIIIHIPANPEYSSLNLASAVQVMAYELRMACRDLLETPPASPTLTLHGGGM 203

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               D++E  Y HLEQ  +++GF+    P ++M ++RRLF RAR E +E+NILRGIL++ 
Sbjct: 204 AATFDEIELLYAHLEQVAISSGFLDPQEPKRLMQRMRRLFARARLEKEEVNILRGILSAC 263

Query: 237 EQQN 240
           E++ 
Sbjct: 264 EKRM 267


>UniRef50_B5ENX8 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Acidithiobacillus ferrooxidans RepID=B5ENX8_ACIF5
          Length = 256

 Score =  255 bits (652), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 116/245 (47%), Positives = 151/245 (61%), Gaps = 1/245 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           LQ +RIVLVE SH GN+G+ ARAMK MGL +L LV+P   PD +A ALA+GA D++ +A 
Sbjct: 6   LQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQ 65

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +   LD AL GC  V GTSAR R + WP  + RE   + +A+      AL+FGRER GLT
Sbjct: 66  VCTNLDTALQGCHKVYGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLT 125

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP-YPLV 180
           N E+ +C   V I    EY SLNL  AVQV+AYE+ MA L  Q   +    +       +
Sbjct: 126 NAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYELHMAALTAQPAQDVPAEDVPEQPAPI 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +D+E FYGHL+  L  +GF++E    ++M +LRRLF RARP   E+NILRGIL  IE+  
Sbjct: 186 EDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTEIERWA 245

Query: 241 KGNKA 245
                
Sbjct: 246 SKVDR 250


>UniRef50_C6NVG4 tRNA:Cm32/Um32 methyltransferase n=1 Tax=Acidithiobacillus caldus
           ATCC 51756 RepID=C6NVG4_9GAMM
          Length = 263

 Score =  254 bits (651), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 115/246 (46%), Positives = 149/246 (60%), Gaps = 3/246 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  ++RIVLVETSH GN+GS ARAMK MGL  L LV P   PD+QA ALA+GA D++  A
Sbjct: 17  LAPDLRIVLVETSHPGNIGSAARAMKVMGLERLVLVRPHRFPDAQATALASGAEDLLERA 76

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + D L  ALA C  V GT+AR R + WP L  R    + VA  A+ PVA++FG ERVGL
Sbjct: 77  EVYDDLAAALADCRRVYGTTARDRHIAWPQLTARPAAAEIVALGASAPVAILFGNERVGL 136

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N EL  C   + I     Y SLNLA AVQ++AYE+ +A   T+     V     P    
Sbjct: 137 SNRELDLCQCLIQIPTAEAYRSLNLAQAVQILAYELLLAQRETRHPAPSVLETAAPRA-- 194

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             +E FYGHL Q L   GF++      +M +LRRLF RARP+  E+ ILRGIL  +E+  
Sbjct: 195 -AMEGFYGHLAQVLRQAGFLQAPRETHMMRRLRRLFDRARPDLNEVYILRGILTEVERWA 253

Query: 241 KGNKAE 246
           + +K +
Sbjct: 254 QMDKGD 259


>UniRef50_Q7NRY2 Probable RNA methyltransferase n=1 Tax=Chromobacterium violaceum
           RepID=Q7NRY2_CHRVO
          Length = 244

 Score =  254 bits (649), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 5/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +QNIR+VL   +H GN+GS ARAMKTMGL+ L+LV P V P  +A ALA+GA D++ NA 
Sbjct: 1   MQNIRVVLARPNHPGNIGSAARAMKTMGLSRLYLVEPKVFPSEEANALASGAVDLLENAT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
           +V +L EAL+  ++    ++R R L  P+  PR+   + +A A +   VALVFG E  GL
Sbjct: 61  VVGSLREALSDVTVACALTSRRRELTTPLSTPRQTTPELIARARDGEQVALVFGNETFGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + EE+++C+  V I  NP+Y SLNLAMAVQV+ YE+        E        E      
Sbjct: 121 SIEEVEQCNRLVTIPGNPDYFSLNLAMAVQVMTYELFSHTGVDVE----YLRAEGEAATQ 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +++   GHLEQ +   G+ +  +  ++M ++R +F RA    +E++ILRG    +++  
Sbjct: 177 SEVDGMCGHLEQAMDEIGYFQRRNSERLMRRMRTMFHRAGMLREEIDILRGFYKQVQRTA 236

Query: 241 KGNKAE 246
            G   +
Sbjct: 237 SGRSGD 242


>UniRef50_C0QKR3 TrmH2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QKR3_DESAH
          Length = 247

 Score =  252 bits (645), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 5/244 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61
           Q I +VLVE     N+GSV RAM   G + L LVNP    ++  A  +A  A  ++  A 
Sbjct: 4   QQITVVLVEPQGPLNIGSVCRAMMNFGFSQLCLVNPCTTFNNLDARKMALSALPILEKAV 63

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VDTL +AL  C L  GT+ R        L P + G     E      ALV GRE  GL 
Sbjct: 64  VVDTLAQALKNCHLAFGTTRRFGKYRQDFLSPEDFGRTLAEEPDTNQCALVMGREDHGLY 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
             EL+ C   V I     Y S+NL+ A  ++ Y+  MA   T      +    TP     
Sbjct: 124 TSELELCQRFVTIPTENAYGSMNLSHATALLLYQASMALGRTIP----LNTGSTPPATSH 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           +L   Y H+ ++L    F+   +P  ++   RR+F RA  + +E+ I+RG++  I+    
Sbjct: 180 ELAGMYDHMTKSLCDIDFLNTQNPDHLLRTFRRIFGRAGLDRREVAIIRGLMGRIDWTES 239

Query: 242 GNKA 245
             K 
Sbjct: 240 ERKK 243


>UniRef50_Q2JI62 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Synechococcus
           RepID=Q2JI62_SYNJB
          Length = 276

 Score =  251 bits (643), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 7/248 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60
           L  +R+VLV+ +   N+G++AR MK MG     LV+P   P   +AI  A   +D++  A
Sbjct: 12  LAQVRLVLVQPAGPRNLGAIARVMKNMGFRQWVLVDPQCDPLDIEAITTAVHGADLLHQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLP--WPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             V TL EAL GC  V GT+ RS+T P  W +  PR+     +A         VFG E  
Sbjct: 72  RKVQTLPEALQGCVQVFGTTGRSQTYPPEWQIQSPRQAFPALLAAGPAAL---VFGPEDR 128

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NEEL  CH  + I  +  Y SLNLA AV +  YE+    +    +            
Sbjct: 129 GLSNEELALCHRQIQIPTDATYPSLNLAQAVAICCYELY-TLVCQSPSPAPPMPSPQRLA 187

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             + LE F+ HLE  LL  G++  +   + M K R LF RA     E+ +LRGIL  ++ 
Sbjct: 188 PFELLEGFFDHLEALLLQIGYLHPHTARRKMLKFRALFQRAGLTVAEVALLRGILRQLQW 247

Query: 239 QNKGNKAE 246
               ++ E
Sbjct: 248 SQGCSRQE 255


>UniRef50_Q0VS87 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VS87_ALCBS
          Length = 261

 Score =  251 bits (642), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 114/260 (43%), Positives = 169/260 (65%), Gaps = 15/260 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+N+RIV+VETSH GN+G+ ARAMKTMGL++L LV P   P  +A A A+GA DV+  A
Sbjct: 1   MLENVRIVMVETSHPGNIGAAARAMKTMGLSDLRLVQPQSYPSVEATARASGAGDVLEAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL----KSVAEAANTPVALVFGRE 116
            + +++DEAL G +LV+GTSAR R +PWP L PR+              +T +A++FGRE
Sbjct: 61  QVCNSVDEALEGATLVIGTSARQRRIPWPCLTPRQLAAQLSHDLANAPQDTRIAVLFGRE 120

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH---- 172
             GLTN+EL++C+ HV++ ANPEY  LN+A AVQ+I+YE+R+A L      ++       
Sbjct: 121 DRGLTNDELRRCNLHVSVPANPEYGVLNVASAVQLISYELRLALLGDDFELQESRSRREV 180

Query: 173 -------EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQE 225
                   + P    + +  F  HLE+ +  +GF+    PGQVM ++RRLF RARP+  E
Sbjct: 181 MPLPEMFWDEPPATNEAVSGFLDHLEKVMAQSGFLNPQQPGQVMTRMRRLFMRARPDKME 240

Query: 226 LNILRGILASIEQQNKGNKA 245
           ++ILRG+L ++E++ + ++ 
Sbjct: 241 MSILRGVLVALEKKMQRDEG 260


>UniRef50_Q3A4B2 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Desulfuromonadales RepID=Q3A4B2_PELCD
          Length = 244

 Score =  251 bits (642), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNA 60
             +I +VLVE     N+GSV RAM   G ++L LVNP+       A  +A  AS ++  A
Sbjct: 3   FAHICVVLVEPQGPLNIGSVCRAMMNFGFSDLRLVNPVADHLCDDARRMAVKASGILEGA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +   L  ALA C+L  GT+ R        L P +   + +       VA VFGRE  GL
Sbjct: 63  RLFPDLPSALADCNLAYGTTRRFGKYREDFLHPDDAAREFIPATQGGRVAWVFGREDKGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
              EL  C   V I  +    S+NLA +V +  YE     +A    G+    + T    +
Sbjct: 123 ETSELDLCQRFVTIPTDDACPSMNLAQSVSICLYETSR--VAAIACGKTAGRKST--SSI 178

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE  Y H+  TL   GF+   +P  ++   RR+F RA    +E+ ILRG+ + ++  N
Sbjct: 179 ATLEAMYRHMRDTLTDIGFLDPQNPDHILRSFRRIFGRAGLNDREVRILRGLWSRLDWLN 238

Query: 241 KGNKAE 246
              + E
Sbjct: 239 GQRREE 244


>UniRef50_B9Z1W4 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Lutiella
           nitroferrum 2002 RepID=B9Z1W4_9NEIS
          Length = 254

 Score =  249 bits (638), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 5/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+NIR+VL   SH GN+GS ARAMKTMGL+ L+LV P   P  +A  LA+GA D++ +A
Sbjct: 9   FLKNIRVVLARPSHPGNIGSAARAMKTMGLSRLYLVEPKTFPSPEADTLASGAVDLLQHA 68

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
            +V+TL EAL+  ++    ++R R L  P+  PR+   + VA A +   VALVFG E  G
Sbjct: 69  VVVNTLAEALSDVTVACALTSRRRELTTPLSTPRQTTPELVARARDGEQVALVFGNETFG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ +E+++C+  V I  NPEY SLNLAMAVQV+ YE+                 E     
Sbjct: 129 LSIDEVEQCNRLVTIPGNPEYFSLNLAMAVQVMTYELFSHTGVD----VDYLRAEAESAT 184

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++E F GHL+QTL   G+    +  ++M +LR LF RA    +E++ILRG L  +++ 
Sbjct: 185 RDEVEGFCGHLDQTLADIGYYERRNGERLMRRLRTLFNRAHLLREEIDILRGFLKQVQRV 244

Query: 240 NKGNKA 245
              +  
Sbjct: 245 AHRDDG 250


>UniRef50_A8PK88 RNA methyltransferase TrmH, group 1 n=1 Tax=Rickettsiella grylli
           RepID=A8PK88_9COXI
          Length = 239

 Score =  249 bits (636), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 5/238 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIVLV+T+  GN+G+ ARAMKTMGL  L+LV P   P   A   A+ A D++ +A 
Sbjct: 3   LSQLRIVLVKTTCPGNIGATARAMKTMGLKQLYLVAPQSFPHINASVRASHAIDILADAI 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VD L+EAL  C LV GTS R R   W  L PR    K +       +A++FG+ER GLT
Sbjct: 63  VVDQLEEALGDCQLVFGTSTRVREFNWVSLTPRVAAEKIMNHC-QQKIAILFGQERCGLT 121

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N+ELQ+CH+ + I ANPEY+SLNLA AVQ++ YE+R A+L      + ++    P   V 
Sbjct: 122 NKELQRCHFQMTIPANPEYNSLNLAAAVQIVCYELRNAFLQE----KNIKKRTVPLADVK 177

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             + FYG L++ L    F++ N    VM+KLRR+F+RA  +S E+ IL+GI +++E++
Sbjct: 178 QHDYFYGQLQKRLKKIEFLKPNRSQHVMDKLRRIFSRAELDSDEIKILQGIFSALEKK 235


>UniRef50_Q1QVJ6 RNA methyltransferase TrmH, group 1 n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QVJ6_CHRSD
          Length = 246

 Score =  249 bits (636), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 119/245 (48%), Positives = 162/245 (66%), Gaps = 3/245 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIRIVLV+T H GN+G  ARAMKTMGL++L LVNP   PD++A  LAAGA+DVI NA
Sbjct: 1   MLSNIRIVLVQTFHPGNIGQAARAMKTMGLSDLVLVNPRSFPDAEATRLAAGATDVIDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPML-DPRECGLKSVAEAANTPVALVFGRERVG 119
            +V+ + +A+  C  VVG SAR R+LP P   DP     + +  A + PVALVFGRER G
Sbjct: 61  RVVEHIAQAVGDCVQVVGASARLRSLPLPHFDDPEPMASELIEHAQDAPVALVFGRERFG 120

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LTN+E++ C + V+I ANPEY  LNLA AVQ++AYEVR AW   Q +    +   +  P 
Sbjct: 121 LTNDEIRHCTHQVSIPANPEYGVLNLAQAVQILAYEVRRAWRHHQASPATSQTPPS-LPT 179

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D +  F  HL + L+ +GF+ + H  +  + LR LF RA+P  +EL+ILRG+L+++E+ 
Sbjct: 180 RDQMAHFEAHLHEALVTSGFLTQPHA-RTEDHLRALFARAQPSRKELSILRGVLSTLEKA 238

Query: 240 NKGNK 244
               +
Sbjct: 239 GSNPR 243


>UniRef50_A1WXZ7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halorhodospira
           halophila SL1 RepID=A1WXZ7_HALHL
          Length = 249

 Score =  248 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 107/244 (43%), Positives = 147/244 (60%), Gaps = 4/244 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L+  RIVLV T+H GN+G+ ARAM+TMGL +L+LV+P   P D +A+A AAGA DV+  A
Sbjct: 3   LERTRIVLVGTTHPGNIGAAARAMRTMGLRDLYLVDPQCDPGDPEAVARAAGAGDVLERA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L  AL GC L  G SARSR    P L+ R     +VA+  +  +A VFGRER GL
Sbjct: 63  RTAPDLATALTGCRLAFGLSARSRAERQPRLELRPAAESAVAQGGDGDLAWVFGRERTGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL  CHY V I  +P+YSSLN+A +VQ++A+E+RMA       G      E P   V
Sbjct: 123 TNAELDHCHYLVQIPTDPDYSSLNVAQSVQLVAWELRMA---AAAGGPVQGQAEEPPAAV 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           D LERF+ HLE+     G++  ++P   M +LR +F RA     E+ +LRG+++ +    
Sbjct: 180 DTLERFFDHLEEMAGRVGYLDRHNPALTMRRLRNIFRRAWLTEDEVRMLRGLISHVLNPR 239

Query: 241 KGNK 244
           +  +
Sbjct: 240 RWRE 243


>UniRef50_C9R390 RNA methyltransferase, TrmH family, group 1 n=5 Tax=Pasteurellaceae
           RepID=C9R390_AGGAD
          Length = 241

 Score =  248 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 140/243 (57%), Positives = 178/243 (73%), Gaps = 5/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT+L LV P    D QAIALAAGA DV+ +A
Sbjct: 1   MLKNIRIVLIETSHSGNIGSAARAMKTMGLTDLVLVAPKQSEDDQAIALAAGAEDVVKSA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              ++  +A+A CSLV+GTSAR R L   +++PRECG K+VA A N  VA+VFGRERVGL
Sbjct: 61  VTAESFSQAVADCSLVIGTSARLRHLQNSLIEPRECGKKAVAYATNGKVAIVFGRERVGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT--QENGEQVEHEETPYP 178
           TNEEL KCHYHV I ANP+Y+SLNLAMAVQ+IAYEVRMA+L        + + +    YP
Sbjct: 121 TNEELLKCHYHVTIPANPDYTSLNLAMAVQLIAYEVRMAYLTQTIASPSQNIRNNANIYP 180

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            +++LE F+ H EQ   + GFI+      VM +LRRL+ RA  E  ELNIL G+L+++E+
Sbjct: 181 QMEELEYFFSHTEQLYRSVGFIQNQ---GVMQRLRRLYNRAGIEKTELNILLGMLSAVEK 237

Query: 239 QNK 241
           + K
Sbjct: 238 KLK 240


>UniRef50_A1ALQ6 RNA methyltransferase, TrmH family, group 1 n=9
           Tax=Desulfuromonadales RepID=A1ALQ6_PELPD
          Length = 251

 Score =  247 bits (631), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/246 (32%), Positives = 125/246 (50%), Gaps = 7/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  ++ IV+VE    GN+G V RAMK MGL+ L LV    +   +++  A  A D++  A
Sbjct: 8   IADSVSIVMVEPQSPGNIGMVCRAMKNMGLSRLRLVKGCDRFHPESLKFAVSAKDLLERA 67

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
            + D L  ALA C+L VGT+ R       +L P +        A      ALVFGRE  G
Sbjct: 68  ELYDDLASALADCALTVGTTRRHGKYRQEILSPPQVATLLRTRAQGDCRGALVFGREDSG 127

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LT +EL  C +H  I  + EY SLNL+ AV +  YE+  A  +      ++         
Sbjct: 128 LTTDELSLCRWHATIPTSSEYGSLNLSQAVLLFCYELGKASDSPGGGRTEI------PAT 181

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             ++E  +  ++ +L   GF+ E +PG +M  LRR+  R+  +++EL ILRG+ + ++  
Sbjct: 182 SAEMETLFSQMDTSLQRIGFLNEQNPGHIMRSLRRILFRSELDNRELAILRGMFSQVDWA 241

Query: 240 NKGNKA 245
             G   
Sbjct: 242 CSGFDG 247


>UniRef50_Q2LY86 RRNA methylase, spoU family n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LY86_SYNAS
          Length = 263

 Score =  246 bits (630), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 77/246 (31%), Positives = 126/246 (51%), Gaps = 7/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNA 60
           L++I +VL    + GN+GS AR  K MG+  L +V+       +   ++   A+DV+ + 
Sbjct: 18  LEHIAVVLNHPKYAGNIGSAARCAKNMGIERLIVVSDREYRQEEIRQMSTHLAADVVDSI 77

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L EAL+G + +VGT+AR      P++ PRE   + +  + +  VAL+FG E  GL
Sbjct: 78  VYFRDLGEALSGFNYIVGTTARLGLARGPVVSPREMAEQVIEISRDNEVALLFGPEDTGL 137

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN++L+ CH  V+I  +  + SLNL+ AV ++ YE+ +A                     
Sbjct: 138 TNDDLRYCHTVVSIPTSERFRSLNLSHAVMILCYEISVAETG------IPVRFTPKMASS 191

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +LE  YGH+   L   GF+   +P   M  +RRLF+R R +++E+ I+RGI   +    
Sbjct: 192 RELEGMYGHIGALLQKIGFLNPENPEYWMMHIRRLFSRIRLQAKEVRIIRGICRQLCWYL 251

Query: 241 KGNKAE 246
                +
Sbjct: 252 HHKTLD 257


>UniRef50_B0TYD5 rRNA methylase, SpoU family n=19 Tax=Francisella RepID=B0TYD5_FRAP2
          Length = 249

 Score =  246 bits (628), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 112/244 (45%), Positives = 154/244 (63%), Gaps = 3/244 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NIRIVLVE SH+GN+GS ARAM  MGLTNLWLVNP    D +AIAL+  A++V+ NA
Sbjct: 4   LFDNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEAIALSCHATEVVKNA 63

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERV 118
            IV  L EAL     VVGTSAR R +  P+    +     +   + ++  +A++FGRER 
Sbjct: 64  RIVPNLQEALDDIDYVVGTSARVRRVSLPIEPISKVATNILNKIQKSDEKIAILFGRERT 123

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-PY 177
           GL NEEL   + H  I +N  Y+SLNLA AVQ++AYE+    +   +  E  E+      
Sbjct: 124 GLLNEELLMSNVHAYIPSNEGYTSLNLAQAVQLVAYEIYKQTVEISDLKEVPEYTHLHKK 183

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             V +L+  Y H E ++L +GF+ ++ PG VM+K+RRLF R+  ESQE+NILRG L S++
Sbjct: 184 ASVKELQGLYQHFEDSMLQSGFLDKDKPGHVMDKMRRLFQRSELESQEVNILRGFLTSLD 243

Query: 238 QQNK 241
            + K
Sbjct: 244 NKGK 247


>UniRef50_Q31I12 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Gammaproteobacteria RepID=Q31I12_THICR
          Length = 268

 Score =  245 bits (627), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 6/245 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  I+IV+VETSH GN+G+VARAMK MGL+ L LVNP   P   A A A+GA+DV+ +A 
Sbjct: 11  LAKIKIVMVETSHPGNIGAVARAMKNMGLSQLVLVNPKDFPSQVASARASGAADVLNDAK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE----CGLKSVAEAANTPVALVFGRER 117
           +V+TL++A+A C LVVG SAR R + WP LD R+           E  +  VA++FGRE 
Sbjct: 71  VVETLEQAVADCKLVVGASARLRKVSWPQLDVRQTAELAMETVGQEDEDNQVAILFGRED 130

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL+N EL KCHY   I  NP YSSLN+A AVQV  YE+ MA     ++  + E      
Sbjct: 131 SGLSNAELDKCHYLAHIPTNPTYSSLNIAAAVQVFVYELLMAT--DIKSVHEAEGYRHKL 188

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
              D +E FY HL Q L    F+      + M ++RRLF R++ + +E++ILRG+L + +
Sbjct: 189 ASSDQMEGFYDHLYQALQDIEFLDPTKNARFMRRMRRLFNRSQLDVKEIDILRGVLTAAQ 248

Query: 238 QQNKG 242
           +Q K 
Sbjct: 249 RQTKQ 253


>UniRef50_B5JRV8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JRV8_9GAMM
          Length = 239

 Score =  244 bits (625), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 104/237 (43%), Positives = 143/237 (60%), Gaps = 1/237 (0%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
           R+V+V T  + N+G+VARAMK MGL +L LV P   P   A   AAGA DV+ N  + D+
Sbjct: 2   RVVMVRTFQSENIGAVARAMKNMGLNDLVLVAPRDWPSDVARNRAAGAVDVLDNIALADS 61

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124
           ++EA+A C  VV TSAR R   WPM + R+   ++   +     VA++ G ER GL ++ 
Sbjct: 62  VEEAIADCHWVVATSARRRGYEWPMSNARQSMSEAYRRSQEGQQVAILLGPERSGLDSDS 121

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L+ C  H  I+ANP+Y  LN+A A QV+ YE+  A  A  E  E  +     YP  + +E
Sbjct: 122 LRLCDQHCYISANPDYPVLNVAQAAQVLTYELYQASEAGGELPETPDSNRPRYPKHEAVE 181

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            FY HLE  L   GF+R  HPG  + KLRRL T+A+ E  ELN+LRGIL++IE+  +
Sbjct: 182 HFYQHLESALTHIGFLRPEHPGDTLVKLRRLLTKAQIEDSELNMLRGILSAIERLER 238


>UniRef50_C7LVT8 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LVT8_DESBD
          Length = 248

 Score =  244 bits (625), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 4/247 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59
           ML+NI ++L    +  N+GSVARA   MG   + LV P      +A+ LA   A  ++ N
Sbjct: 1   MLENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQGKALPLATHHAGHLLEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERV 118
             I  TL EALA  S   GT+AR+      +  P E   + + ++     VA+VFG E  
Sbjct: 61  IRIHGTLAEALAPYSFAYGTTARTGGWRQGIQTPEEAAPRIIEQSNAGAKVAIVFGPEDK 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLTNEE   C+  + I      +SLNL+ AV V+ YE     LA  +  +     +  Y 
Sbjct: 121 GLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKKSLA--KPFKVAGQPKDRYI 178

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             ++ E  +  L +TL+   F+ +++P   M  L+R F R  P   E N+L G+   + +
Sbjct: 179 SSEEREVLFNQLRETLIEIDFLNKDNPEYFMLPLKRFFNRINPRLNEYNLLMGLCRQMRR 238

Query: 239 QNKGNKA 245
                K 
Sbjct: 239 IVGIAKN 245


>UniRef50_P44676 Uncharacterized tRNA/rRNA methyltransferase HI0380 n=24
           Tax=Gammaproteobacteria RepID=Y380_HAEIN
          Length = 241

 Score =  243 bits (622), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 129/246 (52%), Positives = 172/246 (69%), Gaps = 6/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML+NIRIVL+ETSH+GN+GS ARAMKTMGLT L LV+P    D Q+ AL+AGA +++ NA
Sbjct: 1   MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPK-SVDEQSYALSAGAENIVKNA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD+ DEA+  CSLV+GTSAR R L   +++PREC  K    A    +A+VFGRER+GL
Sbjct: 60  RVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKV--VAYKGKIAIVFGRERIGL 117

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL KCHYH+ I ANP+YSSLNLAMAVQ+++YE+RMA+L        +   E  YP  
Sbjct: 118 TNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTT 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           D L  F+ + E+   + GFI+      VM KL+RL+ RA+ E  ELNIL G+L+++E++ 
Sbjct: 178 DQLAYFFDYTERIYQSLGFIQNQ---GVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRI 234

Query: 241 KGNKAE 246
              K +
Sbjct: 235 DLTKED 240


>UniRef50_B7H3X7 RNA methyltransferase, TrmH family, group 1 family protein n=14
           Tax=Acinetobacter RepID=B7H3X7_ACIB3
          Length = 279

 Score =  243 bits (622), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 106/263 (40%), Positives = 151/263 (57%), Gaps = 18/263 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  +RIV+V T+   N+GS  RAMKTMGL+ L LV+P   P     ALAAGA D++    
Sbjct: 13  LAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
           IV+TL+EA+  C LV GTSARSRT+PWP+LD R    +++  AA    +A+VFGRE  GL
Sbjct: 73  IVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGL 132

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE--------- 171
           TNEEL   +YH+ I  N +Y  LN+A A+QV+ YE+RM+ L  +E               
Sbjct: 133 TNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQS 192

Query: 172 -HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILR 230
              + P      +E FY HLE+ L    F+   +P  +  +LRRLF R + +  E ++LR
Sbjct: 193 MQWDEPLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYHLLR 252

Query: 231 GILASIE-------QQNKGNKAE 246
           GI + ++       ++   +K +
Sbjct: 253 GIFSRVQALTSGKWKKASSDKED 275


>UniRef50_Q3JQS9 RNA methyltransferase, TrmH family, group 1 n=34
           Tax=Burkholderiaceae RepID=Q3JQS9_BURP1
          Length = 346

 Score =  242 bits (619), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 3/234 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAHI 62
           R VLVE SH GN+G+ ARA+KTMG + L LV P V     D +A+A+A+GA DV+ +AH+
Sbjct: 66  RFVLVEPSHPGNVGAAARALKTMGFSRLVLVAPRVPRVQSDPEALAMASGADDVLASAHV 125

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V TL +AL G    +  +ARSR    P L PR     ++ +     +ALVFG ER GL+N
Sbjct: 126 VPTLADALNGVQWSLALTARSREYGPPRLAPRAAAASALQQVRTGDIALVFGNERTGLSN 185

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           E +++C     I ANP YSSLNLA AVQV+AYE+R+A L   E+    +         D+
Sbjct: 186 EHVERCSAIAHIPANPAYSSLNLAQAVQVLAYELRVALLEDDESAVPPDAALGTLAQSDE 245

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           +ER + HLE  L+A  F+   +P ++M +LRRLF R   E +E+NI+RGI   I
Sbjct: 246 IERMFVHLENALIALDFLDPRNPKKLMPRLRRLFARTGLEREEVNIVRGIAKHI 299


>UniRef50_A8ZWU6 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Proteobacteria
           RepID=A8ZWU6_DESOH
          Length = 260

 Score =  241 bits (617), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 8/243 (3%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGA-SDVIGNAHIV 63
           I I+LV      N+G+  RAMK MGL+ L +V P      + +  A  A  DV+    IV
Sbjct: 14  ITIILVRPRIPENIGACCRAMKNMGLSRLKVVAPEAWDPVRIMKTATHACRDVVEKIEIV 73

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
                A++  S + GT+AR       +L P     K+V      PVA++FG E  GL NE
Sbjct: 74  GDTATAVSPFSYIAGTTARMGRQRQMVLSPGGFAEKAVTLCRENPVAVMFGPEDRGLENE 133

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +LQ CH  V I  + E+SSLNLA AV VI YE+  A    Q      +H +       +L
Sbjct: 134 DLQYCHNLVHIPTS-EFSSLNLAQAVLVICYELFGAARPNQ------DHFQPRLASSFEL 186

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           E  Y  +++ LLA  F+R ++P   MN  RR  +R    ++E+ ++RG+   +    +  
Sbjct: 187 EGMYDQMKEVLLAIDFLRPDNPDYWMNNFRRFVSRVGLTAKEVKLIRGVCRQVNWYGEKR 246

Query: 244 KAE 246
            A+
Sbjct: 247 YAD 249


>UniRef50_B8FH12 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FH12_DESAA
          Length = 251

 Score =  241 bits (616), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 116/243 (47%), Gaps = 9/243 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60
            + I IVL E     N+G  ARAM  MGL  L +V P      +   +A AGA  +I + 
Sbjct: 7   FKKIAIVLCEPQIPENIGGTARAMANMGLERLIVVKPKSLAQEKIYPMATAGARHLIDSM 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +VD L  AL   + VVGT+AR  +     +       K ++      VALVFGRE  GL
Sbjct: 67  EVVDDLKTALKEFNWVVGTTARLGSHRK-AMTVENMAAKLISMTGENRVALVFGREDRGL 125

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + E+++ CH  V I     +SSLNLA AV ++ YE+  A        ++           
Sbjct: 126 STEDVRLCHQLVNIRTAG-FSSLNLAQAVLLVCYELFKA------GSDKPRESTPKLANK 178

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            DLE  Y  L + L+   FI   +P   M+ +RR FTR    ++++ I+RGI   ++   
Sbjct: 179 FDLEAMYDQLSELLVRIDFINPENPEHWMDNIRRFFTRHPLTARDVKIVRGICRQVDWYT 238

Query: 241 KGN 243
           +  
Sbjct: 239 ERR 241


>UniRef50_B2SXQ6 RNA methyltransferase, TrmH family, group 1 n=30 Tax=Proteobacteria
           RepID=B2SXQ6_BURPP
          Length = 353

 Score =  241 bits (616), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/252 (40%), Positives = 148/252 (58%), Gaps = 13/252 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK---PDSQAIALAAGASDVIGNAHI 62
           R VLVE SH GN+G+ ARA+KTMG + L LV+P V     D +AIA+A+GA DV+ +AH+
Sbjct: 99  RFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLASAHV 158

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V TL +AL+G    +  +AR R    P   PR     +  +A +  +ALVFG ER GL+N
Sbjct: 159 VPTLADALSGVHWSIALTARLREYGPPQWTPRAAAGIAREQALHGEIALVFGNERTGLSN 218

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE----------H 172
           E++++C     I ANP YSSLNLA AVQV+AYE+R  +L+        +           
Sbjct: 219 EDVERCSALAHIPANPAYSSLNLAQAVQVLAYELRTMYLSAGSGAAAAQTAPQAAAGEGE 278

Query: 173 EETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
                   D++E  + HLE  L+A  F+   +P ++M++LRRLF R+  E +E+NI+RGI
Sbjct: 279 AVGARAASDEIESMFTHLESALVALEFLDPANPKKLMSRLRRLFARSGLEREEVNIVRGI 338

Query: 233 LASIEQQNKGNK 244
              I  ++K   
Sbjct: 339 AKHILLKSKSKD 350


>UniRef50_B0T711 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Caulobacteraceae
           RepID=B0T711_CAUSK
          Length = 266

 Score =  240 bits (614), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 111/244 (45%), Gaps = 5/244 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNA 60
                ++L       N+G+VAR M   GL +L LV P    P  +A   A+GA+  + NA
Sbjct: 5   FPPPCVILNNPQMAENIGAVARVMANFGLEDLRLVKPRDGWPQERAWPSASGATWPLDNA 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVG 119
            + DTL+EA+A   LV  T+AR R    P++ PRE   +   E      V L+FG ER G
Sbjct: 65  KVFDTLEEAIADLKLVFATTARPRETRLPVVTPREAAAQLSDEVGRGHAVGLLFGGERAG 124

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L  +++  C   ++I  +  + SLNLA AV + AYE +M          + E    P   
Sbjct: 125 LETDDIALCQAIISIPIDERFRSLNLAQAVSINAYEWKMTV--DDRPWVKFEQNVEPPAD 182

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQ 238
              L   Y  LE+ L   GF         M   LR    RAR   QE+   RG++ ++ +
Sbjct: 183 QSSLLGLYAQLEEQLEEAGFYHPPEKKPSMVRNLRAPLARARLTEQEVRTFRGVVTALSR 242

Query: 239 QNKG 242
               
Sbjct: 243 GRGR 246


>UniRef50_C7RMU6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1
           RepID=C7RMU6_9PROT
          Length = 265

 Score =  240 bits (613), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 114/243 (46%), Positives = 153/243 (62%), Gaps = 1/243 (0%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L+ IRIVL  TSH GN+G+ ARAMKTMG++ L LVNP   PD +A+A AAGA D++G A 
Sbjct: 14  LERIRIVLSHTSHPGNIGAAARAMKTMGVSRLVLVNPKRFPDDEAVARAAGADDILGQAQ 73

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  TLD ALA    V   SAR R L  P L  R+  +  VA A    VAL+FG E  GL+
Sbjct: 74  VCTTLDAALADTVWVCAVSARHRNLGPPALPARQAAVDLVARAGAGEVALLFGNETAGLS 133

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE-ETPYPLV 180
           N E+Q+C   V I A+P Y+SLNLA AVQ++ YE+R+A  A             +P  + 
Sbjct: 134 NAEVQRCRQTVFIPADPGYTSLNLAAAVQLLCYELRLAAFAGSPPVVTRTMPFASPPAVH 193

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            D+ERFY HLE+ ++A+ F+    P +++ KLRRLF R   ES E+NILRG+L ++E++ 
Sbjct: 194 QDVERFYAHLERVMVASDFLDPERPRRLLPKLRRLFGRTELESDEINILRGLLDAVERKL 253

Query: 241 KGN 243
            G 
Sbjct: 254 AGP 256


>UniRef50_C1DBE0 Probable RNA methyltransferase n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1DBE0_LARHH
          Length = 268

 Score =  238 bits (608), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 5/242 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
            L+N+R+VL   S   N+GS ARAMKTMGLT L+LVNP   PD +A  LA+GA DV+  A
Sbjct: 19  FLRNVRVVLARPSLPANIGSAARAMKTMGLTRLYLVNPRRFPDPEADTLASGAVDVLQQA 78

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVG 119
            +  +L EAL G +L    ++R R +  P+  PR    + +  A     VALVFG E  G
Sbjct: 79  VVTGSLGEALDGVALACALTSRKREITTPLAAPRIACAELLDAARQGQQVALVFGNETFG 138

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+ EE  +C+  V IA NP+Y SLNLA AVQV++YE+        ++       +T    
Sbjct: 139 LSIEEAGQCNRLVTIAGNPDYFSLNLAQAVQVMSYELFSQLDFPLDH----LRFQTERAS 194

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++E  YGHL+ TL   GF    +  ++M +LR LF RA  E QE++ILRGIL  +E++
Sbjct: 195 RDEVEGLYGHLDHTLSGIGFYERRNSERLMRRLRTLFDRADLERQEIDILRGILKQVERK 254

Query: 240 NK 241
             
Sbjct: 255 TG 256


>UniRef50_B8H062 rRNA methylase, SpoU family n=6 Tax=Caulobacteraceae
           RepID=B8H062_CAUCN
          Length = 263

 Score =  238 bits (608), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 111/240 (46%), Gaps = 5/240 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++L E     N+GSVAR M   GL++L LV P    P  +A A A+GA   + +A + D
Sbjct: 12  CVILNEPQLAENIGSVARVMANFGLSDLRLVRPRDGWPQERAWASASGAHWPLDDAKVFD 71

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123
           TL+ A+A   LV  T+AR R    P+  PRE       E A    V L+FG ER GL  +
Sbjct: 72  TLEAAIADLKLVYATTARPRETRLPIYTPRESAGHLAEEVAQGRAVGLLFGGERAGLETD 131

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++  C   V+I  +  + SLNLA AV + AYE +M          + E           L
Sbjct: 132 DIALCQAIVSIPIDERFRSLNLAQAVSINAYEWKMTQ--DDRPWRKFEQNVEEPADQAAL 189

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242
              YGHLE  L   GF         M   LR    RAR   QE+   RG++ ++ +    
Sbjct: 190 LGLYGHLEDELEKAGFYHPPEKKPSMVRNLRAPLARARLSDQEVRTFRGVITALSKGRGR 249


>UniRef50_D0SCF3 RNA methyltransferase n=3 Tax=Acinetobacter RepID=D0SCF3_ACIJO
          Length = 282

 Score =  238 bits (608), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 110/249 (44%), Positives = 150/249 (60%), Gaps = 13/249 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L ++RIV+V T+   N+GS  RAMKTMGL+ L LV P   P     ALAAGA+D+I    
Sbjct: 13  LSHVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVAPKTYPHPDIDALAAGATDLIEQIE 72

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE--AANTPVALVFGRERVG 119
           IV+TL +A+  C LV GTSARSRT+PWP+LD R    KS++        VA+VFGRE  G
Sbjct: 73  IVETLADAIKDCHLVFGTSARSRTIPWPLLDARPAAEKSISAVVNDQQDVAVVFGREDRG 132

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQ---------- 169
           LTNEEL   +YHV I  N +Y  LN+A A+QVI YE+RMA LA  E+G+           
Sbjct: 133 LTNEELAMANYHVTIPVNTDYGVLNVAQAIQVICYEMRMATLAAVESGKDETATMPVTDT 192

Query: 170 -VEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNI 228
                + P    + +E+FY H+E+ L    F+   +P  +  +LRRLF R + +  E ++
Sbjct: 193 ESMQWDEPLVTHEQMEQFYPHIEKMLAEIEFLDPKNPRLLPLRLRRLFGRIQLDRMEYHL 252

Query: 229 LRGILASIE 237
           LRGI + ++
Sbjct: 253 LRGIFSRVQ 261


>UniRef50_B6R0E5 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Rhodobacteraceae RepID=B6R0E5_9RHOB
          Length = 256

 Score =  236 bits (604), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 4/236 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           +VL E     N+G VARAM   GL +L L+NP    P  +A + ++ A  VI  A + D+
Sbjct: 16  VVLCEPQLGENIGMVARAMANFGLHDLRLINPRDGWPSEKARSASSRAHHVIDAARVFDS 75

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           ++EA+A   LV  T+ARSR +P P++ P E   +SVA+     P   +FGRER GL N+E
Sbjct: 76  VEEAVADLKLVFATTARSRDIPKPVVGPDEAANESVAQGLRGIPSGYLFGRERWGLNNDE 135

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   +  V +  +P Y+SLN+A AV V AYE R    A        ++E  P    + ++
Sbjct: 136 VALANKIVTLPVDPTYASLNIAQAVLVCAYEWRRVATAGALPFSLDDYEGEP-ATQESIQ 194

Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           R + HLE  L A GF R        + +LR +F +A     E+ I+RG+++  E+ 
Sbjct: 195 RMFDHLESGLDARGFFRPVEKKPVTIRRLRNIFQKADLTDNEVRIMRGVISCFEKY 250


>UniRef50_B4WI29 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Synechococcus
           sp. PCC 7335 RepID=B4WI29_9SYNE
          Length = 304

 Score =  235 bits (601), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 43/287 (14%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  IRIVLV  +   N+GSVAR MK  GL+ L+LV+P      ++A+ +A  A DV+  A
Sbjct: 15  LTQIRIVLVAPAGPLNVGSVARVMKNFGLSQLYLVDPQCDYLGAEALQMAVHADDVLKTA 74

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRER 117
            IV T+ +ALAGC   + T+AR+R    P+  P       +      P+   AL+FG E 
Sbjct: 75  QIVPTIPKALAGCEYAIATTARTRGFNVPLDPPETALPNLLTSNPQQPIRQTALLFGPED 134

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQV------- 170
            GL+N+EL      + I  +  YS+LNLA AV +  YE+         N           
Sbjct: 135 RGLSNQELIYAQQFLKIPTSDAYSALNLAQAVTICCYELSRVARTFCPNSTLSSYPIESS 194

Query: 171 --------------------------------EHEETPYPLVDDLERFYGHLEQTLLATG 198
                                           EHE+ P   ++++ER+Y HLE  LL  G
Sbjct: 195 LENKTPALQNTPSSAKQSESSLSSTANAPIIKEHEDQPRANLEEIERYYEHLESLLLQVG 254

Query: 199 FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245
           ++  +     M K+R+L  RA P S E+ +LRG++  IE     +K 
Sbjct: 255 YLLPHTSASRMRKIRQLLHRASPTSHEVALLRGMIRQIEWALSHSKQ 301


>UniRef50_A0LHT7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LHT7_SYNFM
          Length = 257

 Score =  234 bits (599), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 8/246 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGAS-DVIGNA 60
           L+NI IVL E  +  N+G+ AR+ K MG+  L +VNPL     + + +A  A+ DV+   
Sbjct: 5   LENIAIVLNEPHYPENIGAAARSAKNMGIRRLLVVNPLDFDLDRVLKMATHAARDVVEAM 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            I D L  ALA    VVGT+AR  +    + +PR+   + V+ +     A++FG E  GL
Sbjct: 65  EIYDDLRNALAPFRHVVGTTARLGSRRQRVRNPRQMADELVSISRENEAAILFGTESSGL 124

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNE+L+ C + V I    +++S+NLA AV ++AYE+  A      N E+ +         
Sbjct: 125 TNEQLRFCDFLVTIPTA-DFASINLAQAVMIVAYELYTA------NREEPQRFVPRLAAR 177

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            +LE  Y  L  TL    FI +++P   M  +RR F+R    + E+ I+RGI   I+   
Sbjct: 178 RELEGMYDQLRDTLARINFINQDNPDYWMLSVRRFFSRIGLRAGEVKIVRGICRQIDWYC 237

Query: 241 KGNKAE 246
                +
Sbjct: 238 DRKDED 243


>UniRef50_Q55896 Slr0120 protein n=1 Tax=Synechocystis sp. PCC 6803
           RepID=Q55896_SYNY3
          Length = 240

 Score =  234 bits (597), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/240 (39%), Positives = 124/240 (51%), Gaps = 8/240 (3%)

Query: 11  ETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIVDTLDEA 69
           E     N+G++ARAMK MGL  L LVNP     S +A  +A  A DV+  A +VD L  A
Sbjct: 2   EPQGERNVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATA 61

Query: 70  LAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCH 129
           L     ++ TSAR R L  PM  PR+     +A       ALVFGRE  GLTNEEL + H
Sbjct: 62  LGDRQRIIATSARERILQSPMETPRQALPWLLAPNL--KSALVFGREDSGLTNEELNQAH 119

Query: 130 YHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET-----PYPLVDDLE 184
             V I  +P+Y SLNL+ AV V  YE+  A LA + N +            P      L+
Sbjct: 120 RFVRIPVHPQYPSLNLSQAVMVCTYELYQASLAMETNNQVPGDRLEDGSTMPLATNAQLD 179

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
            +  HLE+TLL    +  +     M K RR++ RA   S+E+ +LRGIL  I+   +  K
Sbjct: 180 SYCQHLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQIDWLAQQIK 239


>UniRef50_Q473D9 RNA methyltransferase TrmH, group 1 n=14 Tax=Burkholderiales
           RepID=Q473D9_RALEJ
          Length = 314

 Score =  233 bits (596), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 9/253 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVI 57
           M   +R VLVETSH GN+GSVARA+KTMG  +L LV+P    V+    A+A+A+GA DV+
Sbjct: 45  MFARVRFVLVETSHPGNVGSVARAIKTMGFGSLVLVSPREPGVREHPDAVAMASGADDVL 104

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFG 114
             A IVD+++ AL G +  V  +AR R    P L PR+      +S+A  A   +A VFG
Sbjct: 105 AGAVIVDSIEAALEGATQTVAMTARQREFGPPRLLPRDAAARGAESLAARAGDEIAFVFG 164

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE- 173
            ER GL N+ +++C     I ANP Y+SLNLA AVQ+IAYE+R+A L   +         
Sbjct: 165 NERYGLPNDVVERCVAVTHIPANPVYASLNLAQAVQLIAYEMRLALLDRAQAAPDDSGNI 224

Query: 174 --ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                    + +E  +GHL+Q L A GF+   +P ++M +LRRL  RA  E +E+NILRG
Sbjct: 225 GYAGEPATAEQVESMFGHLQQGLEAIGFLDPANPRKLMTRLRRLLARAGLEREEVNILRG 284

Query: 232 ILASIEQQNKGNK 244
           I   +    +G +
Sbjct: 285 IAKHMLIAVRGGR 297


>UniRef50_C5V5A5 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V5A5_9PROT
          Length = 253

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 116/244 (47%), Positives = 151/244 (61%), Gaps = 5/244 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L NIR+VL  T+H GN+G+ ARAMK MGL+ L+L+NP   PD QA A+AAGA DV+ NA 
Sbjct: 7   LSNIRVVLSHTTHPGNIGAAARAMKAMGLSRLYLINPRHFPDPQASAMAAGADDVLQNAV 66

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +  ++DEAL G  L VG +AR R +   +  PRE   + V +A    VAL+FG E  GLT
Sbjct: 67  VCASIDEALDGVVLTVGMTARQRDISNEVSVPREAMPQVVQQAQTLQVALLFGTEMSGLT 126

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEE  +    V I ANPE+SSLNLA AVQVI+YE+ +A    Q        +        
Sbjct: 127 NEEASRAQMLVNIPANPEFSSLNLAAAVQVISYELSVAAQNYQ-----PVEQSLQPAAHQ 181

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            +E F  HLE+TL   GF    +P ++M +LRRL+ RARPE+ E+NILRGIL+   + N 
Sbjct: 182 QVEGFMSHLEKTLHEIGFFTTQNPARMMQRLRRLYARARPEADEINILRGILSVTTEYNG 241

Query: 242 GNKA 245
             KA
Sbjct: 242 RLKA 245


>UniRef50_C8X0D5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X0D5_DESRD
          Length = 256

 Score =  228 bits (583), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 4/248 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGN 59
           +L N+ +VL +     N+GS ARA   +G  NL LV P      +A  LA G   +V+ +
Sbjct: 7   LLDNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDLERAAPLATGRGKEVLHS 66

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERV 118
             +   L  AL+    V GT+AR+      +  P +       + A    VA+VFG E  
Sbjct: 67  LTLHPDLPSALSPHHTVYGTTARTGGWRKAIRTPEQVAEDVAGKLAAGHQVAVVFGPEDR 126

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+NEE+  C   + I    E +SLNL+ AV ++ YE   A    +          +   
Sbjct: 127 GLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYEWFKASSGKRFLRTTPPQ--SRLC 184

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             ++ E     +++ LL   F ++++    M  +RR F R      E N+L GI   ++ 
Sbjct: 185 THEERETLLTSVQEALLRLDFFKDDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQVKW 244

Query: 239 QNKGNKAE 246
                  +
Sbjct: 245 LATRTDTD 252


>UniRef50_Q4PK37 Predicted RNA methyltransferase n=1 Tax=uncultured bacterium
           MedeBAC49C08 RepID=Q4PK37_9BACT
          Length = 239

 Score =  228 bits (583), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 5/238 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + QN+  VLVETSH GN+G+ ARAM +MG+ NL LVNP   P +++   A     V+  A
Sbjct: 3   IFQNLNFVLVETSHPGNIGACARAMNSMGICNLSLVNPKEFPSTESETRAKSGKKVLDQA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVG 119
           +I D L+EA+   +LV+GTSARSR++PWPM++    G       A    V++VFG E VG
Sbjct: 63  NIHDNLNEAINTSNLVIGTSARSRSMPWPMMEINNLGKIINESLARKEKVSIVFGNEAVG 122

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NE+L KC +H+ I  + + SSLNL+ AVQ++A+E+     ++       +  E     
Sbjct: 123 LDNEDLGKCDFHLQIPTSED-SSLNLSHAVQIVAHEIYKGSSSSDLF---TQAREVELAS 178

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
               E+   H+E  L    F    +P QV  +LRRL  R + +  E+ ILRGIL+++E
Sbjct: 179 SQQKEKLIEHIELVLELLDFYDHQNPKQVPARLRRLIKRMQLDKLEIGILRGILSNLE 236


>UniRef50_C1XJE3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Meiothermus
           ruber DSM 1279 RepID=C1XJE3_MEIRU
          Length = 257

 Score =  228 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 86/257 (33%), Positives = 122/257 (47%), Gaps = 18/257 (7%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ---------AIALAAG 52
           L+NIRIVLV +    N+G+ ARAM+  G+++LWLV P  +             A  LA  
Sbjct: 4   LENIRIVLVGSQEPMNIGAAARAMQNFGISDLWLVAPEPRVREDLARHPGGSLAYRLAVH 63

Query: 53  ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVAL 111
           A DV+    +VDTL EA+A   LVVGT+ R R +   P++ PR   L+    A    VA+
Sbjct: 64  AEDVLDRMRVVDTLPEAVADARLVVGTTVREREIYTGPVVGPRPMALRVAQVAPRGRVAV 123

Query: 112 VFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171
           VFGRE  GLT +E+      V I  +P   SLNLA AV ++ YE+               
Sbjct: 124 VFGRETSGLTTDEIDLSQLIVRIPTSPRQPSLNLAQAVLLLCYEIF------GVAQAPPP 177

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            E         L++ +  L++ +L  GF  E      + + RRL  +AR    E+ +LRG
Sbjct: 178 PEPLQLASQAALQQLFDDLKEYILRIGFTDEKRLPYAVRRFRRLLHKARLTPGEVQLLRG 237

Query: 232 ILASIEQQN--KGNKAE 246
            L            K +
Sbjct: 238 FLHQSRWYAQHGRRKTD 254


>UniRef50_Q7CYC5 tRNA/rRNA methyltransferase n=14 Tax=Rhizobiales RepID=Q7CYC5_AGRT5
          Length = 277

 Score =  228 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 4/240 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LVE     N+G VARAM   GL+ L LVNP    P  +A A A+ A  VI    + +
Sbjct: 16  AIILVEPQLGENIGMVARAMANFGLSELRLVNPRDGWPSEKARAAASKADHVIDGTRVFE 75

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123
           TL+EA+   + V  T+AR R    P+  P         +        ++FGRER GLTNE
Sbjct: 76  TLEEAIKDLNFVYATTARERYGFKPVRAPVTAADTLRTKFKAGEKTGILFGRERWGLTNE 135

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      V    NP ++SLN+A AV +++YE  M            +  E      + +
Sbjct: 136 EVALADEIVTFPVNPAFASLNIAQAVLLMSYEW-MKSGMDDLGETLFQPIEQRPSTKEQV 194

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242
              + H+E+ L A G+         M + LR + +R     QE+++ RG++ S+++  + 
Sbjct: 195 FGLFEHIEEALDARGYFHPAEKKPKMVDNLRAVLSRRGFSEQEISVFRGVIRSLDRFPRQ 254


>UniRef50_B8DKE7 RNA methyltransferase, TrmH family, group 1 n=11 Tax=Desulfovibrio
           RepID=B8DKE7_DESVM
          Length = 266

 Score =  228 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----LVKPDSQAIALAA-GAS 54
           ML N+ +VLV+T    N+G VARA   MG  ++ LV+P          ++A+ LA     
Sbjct: 1   MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60

Query: 55  DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVF 113
           D++    +V TL EA+A C++V GT+AR+      +L P     ++    A    VA+VF
Sbjct: 61  DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           G E  GLTN+E++ CH  + I   PE SSLNLA AV V+ YE                  
Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYECLK--GTATHPFRPGPAP 178

Query: 174 ETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL 233
           ++      +LE  +  L  TLLA  ++R ++P   M  +RR   R R    E +++ G+ 
Sbjct: 179 DSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEFDLVMGVC 238

Query: 234 ASIEQQ 239
             +++ 
Sbjct: 239 RQVKRM 244


>UniRef50_C0GN85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfonatronospira
           thiodismutans ASO3-1 RepID=C0GN85_9DELT
          Length = 252

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 4/243 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNA 60
           + NI ++L    ++ N+GSVARA   MG + L +         +A  LA +  ++++ + 
Sbjct: 1   MNNIAVILCRPKYSENVGSVARACINMGCSRLIIAGSQTFDPQRAAPLATSRGAELLRST 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKS-VAEAANTPVALVFGRERVG 119
                L++AL G   V  TSAR       +  P +   +    E  +   ALVFG E  G
Sbjct: 61  EHYPNLEQALKGFHRVFATSARVGGWRKGVFLPWQAAQEIMRPETLDQDTALVFGPEDKG 120

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L N E++ C   ++I    +  SLNL+ AV ++ YE              +   ++P   
Sbjct: 121 LANHEIELCPRIISIPTTSQAWSLNLSQAVLLVLYECFK--HVPAARTRHIPSWDSPPVT 178

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            + ++  + ++++TLL   F++ ++P   M  L+R   +      E N+L GI   I+  
Sbjct: 179 QEQMQLLHQNIQETLLLIDFLQPDNPDYFMLPLKRFLAKTGIRQHEFNLLMGICRQIKWM 238

Query: 240 NKG 242
              
Sbjct: 239 AGR 241


>UniRef50_Q6SFH7 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Bacteria
           RepID=Q6SFH7_9BACT
          Length = 248

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/241 (42%), Positives = 145/241 (60%), Gaps = 2/241 (0%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
              +IVL  TSH GN+GS ARA+KTMG T+L LVNP   P ++A ALAAGA D++ NA I
Sbjct: 9   DQFKIVLCRTSHPGNIGSSARAIKTMGFTHLTLVNPKQFPHAEANALAAGAEDILANATI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V T+++AL    L++G +AR R L     + RE   K  +E+ +  +AL+FG E  GL+N
Sbjct: 69  VSTIEDALKDSHLIIGFTARQRELSQEHKNIREIASKLKSESHSKKIALLFGNETNGLSN 128

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +E++ CH    I +N +YSSLNLA A+Q+I YE+RM         +  +  E      + 
Sbjct: 129 DEVKHCHMLGYINSNTKYSSLNLAQAIQIICYEIRMQLSEDNAIIQSSKKNE--LVTHEV 186

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
              FY HLEQ L   GF+++    ++M +LR LF R   E  E+NILRGIL  I+++ K 
Sbjct: 187 QNGFYLHLEQLLTEIGFLKKIQGDRLMQRLRLLFNRTTMEKDEVNILRGILTDIQKKIKD 246

Query: 243 N 243
            
Sbjct: 247 K 247


>UniRef50_Q1GGZ7 RNA methyltransferase TrmH group 1 n=6 Tax=Rhodobacteraceae
           RepID=Q1GGZ7_SILST
          Length = 249

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 6/243 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
            VLV      N+G  ARAM   GL  + +V P    P+ +A+A+A+GA  ++  A +   
Sbjct: 10  FVLVRPQMGENIGGAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEAQLAQD 69

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           L EALA C+ V  T+AR R L  P+  P     K+         VA++FG ER GL N++
Sbjct: 70  LPEALADCTYVFATTARPRELTKPVFSPEGAMKKAAELMVQGEKVAVLFGPERAGLENDD 129

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           + K +  + +  NPE++SLNLA  V + AYE R      Q   E  E  ++ +    ++E
Sbjct: 130 IAKANAIITVPVNPEFASLNLAQCVLLTAYEWRRQQ--EQVAHETFEIGKSEWATNQEVE 187

Query: 185 RFYGHLEQTLLATG-FIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
               H E+ L   G F        +    R L++R +    ++ +L G++  + +  K  
Sbjct: 188 ALVNHYEERLTEAGYFFPPEKAPGMKTVFRNLWSRMQLTRADVQMLHGVMRQMVRW-KQR 246

Query: 244 KAE 246
           + +
Sbjct: 247 EED 249


>UniRef50_Q0A993 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Ectothiorhodospiraceae RepID=Q0A993_ALHEH
          Length = 260

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 8/237 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61
           +N+RIVLV TSH GN+GSVARAMKTMGL  L LV P    PD QA A A+ A DV+  A 
Sbjct: 12  ENLRIVLVGTSHPGNIGSVARAMKTMGLFRLELVAPECAFPDEQATANASRADDVLEAAG 71

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPW-PMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             D LD ALAGC LV+G SAR R +    +LD RE G + VAEA + PVAL+FGRER GL
Sbjct: 72  RHDNLDAALAGCGLVMGLSARPRRITTAEVLDVREAGRRVVAEAESRPVALLFGRERSGL 131

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL +C   V I ANPEY SLNLA AVQV+ +EV MA  A       V          
Sbjct: 132 TNAELDRCQALVHIPANPEYGSLNLAAAVQVVCHEVNMARGAG------VVAPTRRSASA 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
            D+E F+ HL +     GF+R+++P  +M +LR+LF RA P+  EL +LRG+LA++E
Sbjct: 186 QDMEYFFEHLARVADRVGFLRKHNPEILMRRLRQLFYRAAPDDHELQMLRGLLANVE 242


>UniRef50_B8HLP3 RNA methyltransferase, TrmH family, group 1 n=25 Tax=Cyanobacteria
           RepID=B8HLP3_CYAP4
          Length = 262

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 7/240 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNA 60
           L  +RIVLVE +   N+G+++R +K MGL  L LVNPL  P  ++A  +A  A D++  A
Sbjct: 12  LAQVRIVLVEPAGPLNIGAISRVLKNMGLRQLILVNPLCDPLGTEARQMAVHAVDLLQQA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             V TL +AL GC  ++ T+ R +        PR             P AL+FGRE  GL
Sbjct: 72  RQVQTLPQALEGCERIMATTMREQVGEVVTELPRTGLPWL----LGHPAALIFGREDRGL 127

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN EL      + I  +P Y SLNLA AV V +YE+     A+Q   E +          
Sbjct: 128 TNTELNYAQRLIRIPTDPIYPSLNLAQAVAVCSYELYQQ--ASQALVEPIAPGGGELARF 185

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           ++LE +Y  LE  LL  G++  +     M K RRLF R++P   E+ +LRGIL+ +E   
Sbjct: 186 ENLEAYYQQLETVLLKIGYLYSHTAVSRMAKFRRLFNRSQPTEAEVALLRGILSQVEWAL 245


>UniRef50_D0B958 tRNA/rRNA methyltransferase n=50 Tax=cellular organisms
           RepID=D0B958_BRUME
          Length = 291

 Score =  225 bits (575), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LV      N+G VARAM   GL  L LVNP    P  +A A A+ A  VI NA + D
Sbjct: 31  AIILVNPQLPENIGMVARAMANFGLAELRLVNPREEFPSEKARAAASKADHVIDNAVVYD 90

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123
            L  A+A  + V  T+AR R    P+    E G              ++FGRER GL+NE
Sbjct: 91  DLPSAIADLNFVYATTARERDGFKPVRSAMEAGNALRRRFKTGEKTGILFGRERFGLSNE 150

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      +    NP ++SLN+A AV +++YE   + L  Q +       E P    ++L
Sbjct: 151 EVGLADELLTFPVNPAFASLNIAQAVLLMSYEWMKSGLENQTD-TVFRGPEMPLAPKEEL 209

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIE 237
             F+ HLE+ L   G+ R     ++M N LR + TRA   S EL +LRG++ S++
Sbjct: 210 HGFFNHLEEALDVRGYFRPEARKEIMVNNLRAVLTRAGFASAELKLLRGVVTSLD 264


>UniRef50_A4GJJ4 RNA methyltransferase n=2 Tax=environmental samples
           RepID=A4GJJ4_9BACT
          Length = 243

 Score =  224 bits (571), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 6/235 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE SH GN+G+ ARA+K MG   L LVNP  K   +A   A  A D++ N  I 
Sbjct: 8   DIEFILVEPSHPGNIGACARAIKNMGFKKLALVNPRKKITEEAFHRAKSAKDILENTVIY 67

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            + D A+   +L++ TSAR RT+PWP   +D     +KS  +   T   +VFGRE  GL+
Sbjct: 68  KSFDLAIGDKNLILATSARERTIPWPTFYVDKISDEVKSQIKTKTTKTGIVFGREDNGLS 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NEELQKCHYH+ I A+ EYSSLNL+ A+Q++A+E+R      +    +V    +      
Sbjct: 128 NEELQKCHYHLIIPASEEYSSLNLSHALQIVAFEIRKIVFDNKILKTEVREVVSNL---- 183

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
           + E+   HL + L    F       QV  ++ RL  + R +  E+ ILRG L+ I
Sbjct: 184 ENEKLLEHLMEVLKKIDFYDPKSSKQVKTRIDRLIKKTRLDKIEMGILRGFLSKI 238


>UniRef50_UPI00016C4014 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Gemmata
           obscuriglobus UQM 2246 RepID=UPI00016C4014
          Length = 269

 Score =  223 bits (570), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 4/250 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGN 59
           +L   R+VLV   + GN+G+ AR M+  GL++L LV P        A  +A     V+  
Sbjct: 4   LLTRCRVVLVRPHYAGNLGATARVMRNFGLSDLVLVAPYASTGDLDARRMATHGLAVLDA 63

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWP--MLDPRECGLKSVAEAANTPVALVFGRER 117
           A +V  L +AL+ C   + TS+ +  +     +    E   + +A A   PVA+VFG E 
Sbjct: 64  ARVVPDLGDALSDCVFSLATSSLTAGVFRSGTIGTAAEQMPELLAAAEAGPVAVVFGPEP 123

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT-QENGEQVEHEETP 176
            GL+NEE+ +CH  V + ++P   SLNLA AV +  YE R AW     +   + E  E  
Sbjct: 124 HGLSNEEIGRCHGLVNVPSDPASGSLNLAQAVAICCYEFRKAWSKRLNDARGKPEIPERA 183

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
                D +R + HL   L   G++       +M+ +R+L  RA P  QE+ IL G+   +
Sbjct: 184 VAPFADQDRMFEHLRHALTEVGYLFGEKGDSLMHAIRQLVGRAMPTPQEVKILHGLARQL 243

Query: 237 EQQNKGNKAE 246
              ++  K +
Sbjct: 244 LWASRQMKRD 253


>UniRef50_A5CWV4 RNA methyltransferase, TrmH family n=3 Tax=Gammaproteobacteria
           RepID=A5CWV4_VESOH
          Length = 247

 Score =  223 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 8/239 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              +R+V+V T+  GN+G+ ARAMK M L+ L+LVNP   P + A A A+GA DV+ +A 
Sbjct: 9   FDKVRVVMVNTTEPGNIGAAARAMKNMNLSKLYLVNPKGYPSATATARASGADDVLSDAI 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA--EAANTPVALVFGRERVG 119
           + ++L+EAL G  LV+G SAR R + W  +D      K        +  VA++FG E+ G
Sbjct: 69  VCESLEEALKGTHLVIGASARQRNIKWRQMDVVGTCNKIQKTITIDSQEVAVIFGTEKSG 128

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LTN+EL  C   + I  NP+Y SLN+A A+QV AY+  +    T+      +   +    
Sbjct: 129 LTNKELDLCQILMTIPGNPDYFSLNVASAIQVFAYQNYIYNTPTE-----FKENVSKLAS 183

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQ-VMNKLRRLFTRARPESQELNILRGILASIE 237
            D+LE FY HL Q L    + ++ H    +M +LR  FT+  P+ +E++I RGIL +I+
Sbjct: 184 FDELESFYTHLTQVLEHIEYFKDQHSQTLLMRRLRCFFTKVEPKIEEVSIFRGILKNIK 242


>UniRef50_A0L7Y7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L7Y7_MAGSM
          Length = 258

 Score =  221 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 3/244 (1%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L     +L   SH GN+G+  RA+  MG  +L LV P   P     A AAG +  I    
Sbjct: 10  LSGPVFILDHPSHGGNVGAALRAITNMGFEHLRLVRPRFFPHPDVEAWAAGTAARIPTIQ 69

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV--AEAANTPVALVFGRERVG 119
           + D+LD A A  + +V  + R R     ++ PRE G++     + A++ V ++FG ER G
Sbjct: 70  VFDSLDAATADLNHLVAVTRRGRGQRHQVMSPRELGVRLDPKQQLASSRVGILFGTERTG 129

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L   ++++CH+   I  + E  SLNL+ AV ++AYE+ +     +      + ++     
Sbjct: 130 LETADVERCHWICTIPTHGEKGSLNLSQAVMLVAYELMLGQGLGEVPVHDPQRDDA-LAS 188

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            D++ RF+ HL+  L+   FI+ +   Q+M  L+ LF RA  + +E+ ILRGIL  +   
Sbjct: 189 QDEMVRFFDHLQDVLMQIDFIQPDRYKQMMGTLKALFNRAALDRREITILRGILTEVIHH 248

Query: 240 NKGN 243
               
Sbjct: 249 CARK 252


>UniRef50_A9HXK7 Probable methyltransferase n=5 Tax=Bordetella RepID=A9HXK7_BORPD
          Length = 255

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 12/251 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58
              ++ ++V+ SH GN+GS ARA+KTMG  +L LV P         +A+ALA+GA+DV+ 
Sbjct: 5   FSRVQFIMVQPSHPGNVGSAARAIKTMGFADLVLVEPRYPDMTSQPEAVALASGATDVLE 64

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGL---KSVAEAANTPVALVFGR 115
            A +  TL+EALA  +L    +AR R L  P  D R+      + +A   +   A+V G 
Sbjct: 65  RARVCATLEEALAPVTLAFALTARVRDLGPPPCDIRQAAELASQHLAAPGSGCAAVVLGT 124

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR----MAWLATQENGEQVE 171
           ER GLTN ++  C     I ANPEYSSLN+A A+Q+ A+E+R     A  AT       +
Sbjct: 125 ERAGLTNAQIALCQRICHIPANPEYSSLNVAQALQLAAWELRYALLRANGATLLPASTAQ 184

Query: 172 HEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNIL 229
             +        + ++ F  H ++ L+   F+   HP ++M ++R LF+R+     E+++L
Sbjct: 185 QPDPGAALATSEAVQAFLAHWQEALVHVQFLDPAHPKKLMPRMRHLFSRSALTRDEIDML 244

Query: 230 RGILASIEQQN 240
           RG+  ++ ++ 
Sbjct: 245 RGVCTAMLRKK 255


>UniRef50_B6ISG6 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISG6_RHOCS
          Length = 266

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 5/240 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+G+ ARAM   GLT L LVNP    P+ +A+A +AGA++V+  A +   
Sbjct: 25  VILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTG 84

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNEE 124
             EA+A    V  T+AR R +   ++ PR       A  AA   V ++FG ER GL N++
Sbjct: 85  TREAIADLHKVYATAARVRDMVKDIVTPRRAARDLHAHVAAGRRVGILFGPERTGLVNDD 144

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      +++  NP +SSLNLA AV ++AYE  M     +E         +P    ++L 
Sbjct: 145 IVLSDTMISVPLNPGFSSLNLAQAVLLVAYEWWMEAAQAEEFYTHTGQ--SPPATKEELH 202

Query: 185 RFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
             + HLE  L  TGF    +    ++  +R    RA    QE+    GI+A++  + K  
Sbjct: 203 NLFDHLEGELDQTGFYTHPDKKPSMVRNVRNTLQRAHMTEQEVRTFHGIIAALVGRKKQR 262


>UniRef50_Q2NAS2 RRNA methylase n=11 Tax=Proteobacteria RepID=Q2NAS2_ERYLH
          Length = 384

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 8/242 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            IVLV      N+G+ ARAM+  GLT L LV P    P+  A   AAGA DV+  A +  
Sbjct: 140 AIVLVRPQLGENIGNAARAMRNFGLTELRLVAPRDGWPNPDAGPSAAGADDVLERAQVFA 199

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           T  EA+A C+ +  T+ R R +  P++ P E      ++A     A++FG ER GL  E+
Sbjct: 200 TTAEAVADCAHIYATTVRKRGVTKPVVTPEEAAQAIHSQA--GKSAVLFGPERSGLETED 257

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      + +  +PE+ SLNLA AV + AYE         E  +  + +  P     +L+
Sbjct: 258 VALARAILTVPIDPEFGSLNLAQAVILCAYEWSK----GAELEQPTQEDLLPPAPQAELD 313

Query: 185 RFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
               HLE  L   G+    +        LR + T+      E+  LRG+L+S+++ +K  
Sbjct: 314 DLIAHLEAMLQPKGYFLPANRTEATRRTLRTVLTKPGWNHLEIRTLRGVLSSLQRGDKVP 373

Query: 244 KA 245
           K 
Sbjct: 374 KG 375


>UniRef50_A4GJN4 RNA methyltransferase n=1 Tax=uncultured marine bacterium
           HF10_12C08 RepID=A4GJN4_9BACT
          Length = 245

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 5/245 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60
              I I+LV+T    N+G VAR+M   G TNL LV+P    P  +A+A+A  A +++ N 
Sbjct: 3   FDKISIILVDTQLPENVGLVARSMYNFGFTNLKLVSPKLEWPSEKALAVAVDAKNIVENI 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +  +L EAL+  S  +G +AR R +     D  +   +   +  N  + +VFG E  GL
Sbjct: 63  KVYSSLREALSDSSYSIGYTARLRDMSKQFSDNSKIISEIKEQKINDSIGVVFGGEASGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN+ L      V I  +  +SSLNL+ AV V  Y +      T++    V+    P+   
Sbjct: 123 TNDHLSLITKCVTIDTHENFSSLNLSHAVNVFCYSLFSQVFKTEQL---VDKNSEPHGSQ 179

Query: 181 DDLERFYGHLEQTLLATGFIRENHP-GQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           +DL  F+ HLE+ L + GF +      ++   LR +F RA    +E+  LRG++  + + 
Sbjct: 180 NDLMYFFDHLEEELESRGFFQPEEKMPKMKQNLRNIFHRADLSEREIATLRGVVRVLSEY 239

Query: 240 NKGNK 244
            K  +
Sbjct: 240 RKTKE 244


>UniRef50_C6A381 SpoU protein n=1 Tax=Thermococcus sibiricus MM 739
           RepID=C6A381_THESM
          Length = 246

 Score =  219 bits (560), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 10/248 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIAL-AAGASDVIGNAHI 62
            ++++LVE  +  N+G++AR MK  G+T+L LVNP V P+++     A  A D++ NA I
Sbjct: 2   KLKVILVEPEYPINLGAIARVMKNFGVTDLILVNPKVSPNNKIARTFAVHAVDILENAKI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPM---LDPRECGLKSVAEAANTPVALVFGRERVG 119
            ++L+EAL    L +GTS  +     P    + P E   +      +  + LVFGRE  G
Sbjct: 62  HESLEEALNTVDLAIGTSGLAGGDYIPERAPISPEEFAKRL--SIYDGEIGLVFGRESRG 119

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL+K  + V I  + EY  +NL+ AV VI YEV    L       +    ++    
Sbjct: 120 LDNEELKKLDFTVTIPTSEEYPIMNLSHAVAVILYEVFKQKLKNNPTEVKRRLRKS---T 176

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQ 238
             + E       + L    + ++    +  +   +R   R    ++E++ L G L    +
Sbjct: 177 RQEREMLVEFWAKFLDTLEYPKDLEKRRFYVLMFKRFLGRGFIYAKEVHSLYGPLRRAIK 236

Query: 239 QNKGNKAE 246
             +  K +
Sbjct: 237 LLERCKND 244


>UniRef50_D0KWA0 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA0_HALNC
          Length = 271

 Score =  219 bits (558), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 93/243 (38%), Positives = 129/243 (53%), Gaps = 10/243 (4%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
             I+IVL  TSHTGN+G+VARAMK MGL  L LV+P    D QA+A A  A+D++  A  
Sbjct: 18  DRIQIVLCGTSHTGNLGAVARAMKNMGLHRLVLVSPKTAIDDQALATAKHAADILNTARQ 77

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           VD L +ALA    V  T+AR R L  P++  R+      A  +   +++VFG ER GLTN
Sbjct: 78  VDNLPDALADSVEVWATTARPRDLHLPVMSARDAAETIAASPSTGVISIVFGAERTGLTN 137

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +E+      + I ANP+Y  LNL  AVQ++AYE RMA   T  +  Q   + T       
Sbjct: 138 QEISWAQRIIEIPANPDYPVLNLGQAVQIVAYEWRMA-HGTARSAPQPNIDSTELATTAQ 196

Query: 183 LERFYGHLEQTLLATGFIRE---------NHPGQVMNKLRRLFTRARPESQELNILRGIL 233
              F   L + L  T F             +  ++M +LR L  RA P   EL +++GI+
Sbjct: 197 WAAFEKRLTEQLDRTSFFHRTGSAEKDIAANRERLMARLRVLCRRANPTRNELAVMQGIV 256

Query: 234 ASI 236
            ++
Sbjct: 257 RAL 259


>UniRef50_B7A9R4 RNA methyltransferase, TrmH family, group 1 n=4 Tax=Thermaceae
           RepID=B7A9R4_THEAQ
          Length = 244

 Score =  219 bits (558), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 94/248 (37%), Positives = 124/248 (50%), Gaps = 12/248 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS----QAIALAAGASDVI 57
           L  +R+VLVE     N+G+VARAM+  GL  L+LVNP  +       +A  LA  A +++
Sbjct: 5   LSRVRVVLVEPQEPMNVGAVARAMRNFGLARLYLVNPAPRVGPPWAREAYWLAVHAEEIL 64

Query: 58  GNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
             A  VD+L EALA   LVV T+ R R L    + P    + +   +    VALVFGRE 
Sbjct: 65  DRAVAVDSLMEALADVELVVATTGRPRKLYPAPVVPA-WEVPARVLSVEGEVALVFGRET 123

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GLTNEEL   H    I   PE  SLNLA AV V AYE+  A    +   E         
Sbjct: 124 FGLTNEELALAHVIGTIPTAPEQPSLNLAQAVVVFAYELFKAVGEGRFPRE-------EL 176

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
             V  LE F+  L + +L  GF  +N     M +LRR+F +AR    E+ +LRG+L    
Sbjct: 177 AQVAALEAFFEDLGRYVLEIGFTDQNRFPHAMRRLRRIFHKARLTPGEVQMLRGLLHQSR 236

Query: 238 QQNKGNKA 245
            Q +    
Sbjct: 237 YQMRKKDG 244


>UniRef50_B1Y5A0 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Burkholderiales
           RepID=B1Y5A0_LEPCP
          Length = 252

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 8/230 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62
           R +L+ TSH GN+G+ ARAMK MG  +L LV P    V    + +A+A+GA+D++  A I
Sbjct: 9   RFILLHTSHAGNVGATARAMKVMGFRDLVLVAPRFADVLSREETVAMASGAADILVRARI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           V TLDEAL G  +   T+   R    P   PRE        A    VA VFG ER G++N
Sbjct: 69  VATLDEALEGIHVACATAMTPRDFGPPTSTPREHLPAL--AAGGERVAFVFGSERYGMSN 126

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE+ +C   ++I   P+Y SLNLA AVQ++AYE RMA      +             +D+
Sbjct: 127 EEVYRCQICLSIPTQPDYGSLNLAQAVQLMAYEWRMALGGYDVSARTPA---VQRASLDE 183

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGI 232
           ++    H + TL+A GF+    P ++M +L++L  RA    +E++ILRGI
Sbjct: 184 VQGALSHWQDTLVALGFLDPAAPKKLMPRLQQLLNRAALTREEVHILRGI 233


>UniRef50_UPI0000D53114 rRNA methylase n=1 Tax=Psychroflexus torquis ATCC 700755
           RepID=UPI0000D53114
          Length = 251

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
               ++LVE     N+G+VARAM   GL  L LV P    P+  A A+A+GA +V+ +A 
Sbjct: 9   NRPVVILVEPQLGENIGAVARAMLNCGLRELRLVRPRDGWPNPAAEAMASGAIEVLTSAE 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGL 120
           + +  ++A+   + +  T+AR R L   ++ P E              +  +FG ER GL
Sbjct: 69  VFEQTEDAVWDLNRLFATTARQRDLAKKVVTPNEAAKLFFDTKFTGNNIGFLFGSERSGL 128

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N+++    Y + +  NPE+SSLNLA AV ++ YE   A L  +    +     +    +
Sbjct: 129 INDDIAFADYVINVPLNPEFSSLNLAQAVLLVGYEWFQASLMQKIGSRKWG--NSELSTI 186

Query: 181 DDLERFYGHLEQTLLATGFIRENH-PGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            + E FY  LE+ L   GF+        +   LR +F++A   +QE+  L GI+ ++   
Sbjct: 187 GEREYFYKRLEKHLDEAGFLYPLELAPTICRNLRAMFSKATLTNQEIRTLHGIVTALSNY 246

Query: 240 NKGNK 244
              +K
Sbjct: 247 TPDSK 251


>UniRef50_C7HY98 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HY98_THIIN
          Length = 260

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/245 (36%), Positives = 131/245 (53%), Gaps = 7/245 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58
           L +   VLV TSH GN+G+ ARA+K MG  NL LV P         + +A A+GA DV+ 
Sbjct: 18  LDDTVFVLVGTSHPGNVGAAARALKNMGFANLRLVAPRFADVLTQPETLAFASGAEDVLK 77

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRER 117
            A +   L +A+A C +VV  SAR R    P+  P      +   A     VA VFG ER
Sbjct: 78  TAQVHGELGDAVADCGVVVALSARVRDFGPPLHTPEWLPQLAQRSAEQGRRVAFVFGSER 137

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL+N ++ +C   ++I ANP Y+SLNLA AVQVIA+E R        +  +    E+  
Sbjct: 138 FGLSNADVYRCDALLSIPANPAYTSLNLAQAVQVIAWEWRK---GIGLHAVRPAQAESVA 194

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
               +++    H+EQ LLA   +  N P +++ +L+RL +RA     E+ ILRG+  ++ 
Sbjct: 195 ATAGEVQGMLAHVEQALLALEVLDPNAPRKLLPRLQRLASRAELTRDEVQILRGVCTAVL 254

Query: 238 QQNKG 242
           ++   
Sbjct: 255 RKVPK 259


>UniRef50_A7IP45 RNA methyltransferase, TrmH family, group 1 n=3 Tax=Rhizobiales
           RepID=A7IP45_XANP2
          Length = 298

 Score =  217 bits (554), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 113/242 (46%), Gaps = 5/242 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65
           ++LVE     N+GS ARAM   GL+ L +VNP    P   A   +AGA  ++  A +   
Sbjct: 19  VILVEPQLGQNIGSAARAMGNFGLSRLRIVNPREGWPSEPARIFSAGADRILAEAVLYPD 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNEE 124
           L  AL G +     +AR R +  P+L       ++ +  A    VALVFGRER GL  EE
Sbjct: 79  LRSALVGVNYAFAATARERGMAKPVLGADAVAQEARSRLAGGEDVALVFGRERTGLYTEE 138

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +  C   + +  NP ++SLNLAM V V  YE   A           +   +P     DL 
Sbjct: 139 VSLCDAILTLPVNPAFASLNLAMCVAVTGYEWFKAETGGALPFAPPDR--SPLADKGDLL 196

Query: 185 RFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            F+ HLE  L  +GF R        +  LR +F R     Q+L  L G + ++E+   G 
Sbjct: 197 AFFDHLEGALEQSGFFRSPEKAPSTIRNLRNIFHRLGLTRQDLATLHGAVTALEEGRAGR 256

Query: 244 KA 245
            A
Sbjct: 257 DA 258


>UniRef50_A6GQ32 Probable methyltransferase n=1 Tax=Limnobacter sp. MED105
           RepID=A6GQ32_9BURK
          Length = 269

 Score =  216 bits (552), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 99/252 (39%), Positives = 142/252 (56%), Gaps = 10/252 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIG 58
           L++I IVLV+TSH GN+GSVARAMKTMGL +L LV P  K      +AI+LA+GASDV+ 
Sbjct: 7   LESISIVLVKTSHPGNVGSVARAMKTMGLNDLRLVEPKTKDICSTEEAISLASGASDVLE 66

Query: 59  NAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRER 117
            A I +TL EALA  S+    SAR R L   +  P+E   +++    +    A VFG ER
Sbjct: 67  QARIYNTLPEALADRSVAFALSARMRDLGPSLQSPQEAAREALNLTQSGIGAAFVFGAER 126

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA------TQENGEQVE 171
            GL+N+EL  C+  V IAANP YSSLNL+ AVQ++AY +R  W A       Q +     
Sbjct: 127 TGLSNDELLVCNRQVTIAANPVYSSLNLSQAVQIVAYALRTEWAAGEFAVTDQGSLADSV 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
            +      V  +     H  + + A  F+  + P +V+ +L R+  +   E +E+++LRG
Sbjct: 187 RQGGKLATVKAVADLQAHWLEAMEAVDFLNPDKPKKVVQRLARMLAKTPLEQEEVDMLRG 246

Query: 232 ILASIEQQNKGN 243
             + + +     
Sbjct: 247 FFSDVIRVVDNR 258


>UniRef50_Q2P2B7 TRNA/rRNA methyltransferase n=20 Tax=Xanthomonadaceae
           RepID=Q2P2B7_XANOM
          Length = 254

 Score =  216 bits (550), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 107/240 (44%), Positives = 136/240 (56%), Gaps = 4/240 (1%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IR VLV T H GN+G+ ARAMKTMG++ L LV P    D  A   +AGA DV+  A I  
Sbjct: 7   IRFVLVGTQHPGNIGAAARAMKTMGVSRLVLVAPERALDEDAYRRSAGAEDVLSEAPIFA 66

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLK-SVAEAANTPVALVFGRERVGLTNE 123
           TL EA+A C+LV+G +AR+R +    L P E   +     +    VA VFGRER GLTN+
Sbjct: 67  TLGEAVADCTLVIGCTARARRVALEELLPDEGAQRALAKASEPAEVAFVFGRERTGLTND 126

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE---ETPYPLV 180
           ELQ CH  V I ++P++SSLNLA AVQV+AYEVR+A LA  E                  
Sbjct: 127 ELQLCHAAVHIPSDPQFSSLNLAAAVQVLAYEVRLAQLAAGEAEPAPAAATGLRDGPASH 186

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             LE  +G L  TL    F +   P   M KLRRL  RA    QE+ ++RGIL+  ++  
Sbjct: 187 AQLEGMFGQLGDTLDEIDFHKGRAPESAMRKLRRLLLRAEMTEQEVRLIRGILSDAQRMA 246


>UniRef50_B7KUQ9 RNA methyltransferase, TrmH family, group 1 n=7 Tax=Rhizobiales
           RepID=B7KUQ9_METC4
          Length = 245

 Score =  216 bits (550), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIA-LAAGASDVIGNAHIVDT 65
           ++LVE     N+G  ARAM   GL+ L LV P      + +   A+GA+ V+  A +  T
Sbjct: 6   VILVEPQLAENIGMTARAMANFGLSELRLVAPKNGWPKKGVREAASGATYVLDGAKVYAT 65

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGLTNEE 124
           L EA+A    ++ T+AR R     +  P +     +        V L+FGRERVGL+N+E
Sbjct: 66  LPEAIADLHFLLATTARERGQMKRVFAPEDAMAATAERIGRGERVGLMFGRERVGLSNDE 125

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      V      E+ SLNLA AV ++ YE R A  A            +P    + + 
Sbjct: 126 VSLADAIVTFPVTDEFPSLNLAQAVLLMGYEWRRA--AGLATLRFSGEMLSPPATREAML 183

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
             +  LE+TL   GF        +   +R +  R     Q++   RG L ++ ++ +   
Sbjct: 184 SLFASLEETLAGAGFYPPEKQEIIARNMRDMLHRMAMTEQDVRTFRGALRALNRKARKTD 243

Query: 245 A 245
            
Sbjct: 244 E 244


>UniRef50_A3VSH2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VSH2_9PROT
          Length = 293

 Score =  216 bits (550), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 6/242 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           ++LV      N+G+ ARAM   GL  L LV P    P++ A A+AAGA++V+    +  T
Sbjct: 41  VILVRPQLGQNIGATARAMLNFGLKGLRLVAPRDGWPNADAKAMAAGAAEVLDGVRVFGT 100

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVGLTNEE 124
           + EA+A C  VV T+AR R +  P+  P +   +     A     A++FG E+ GL  EE
Sbjct: 101 VAEAVADCHYVVATTARHRGVFLPVHTPVDTAGELRVRAARAERTAILFGAEKAGLETEE 160

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   H  V I  NP + SLNLA AV V+AYE   A  A        + +        + E
Sbjct: 161 VAHAHALVTIPVNPAFPSLNLAQAVLVVAYEWAQAAGAAPLFTSPYQED---PATQAERE 217

Query: 185 RFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           + + HL   L   G+   +H  +V+ + LR L   A     EL +L G++   E+     
Sbjct: 218 QLFTHLSTALDRAGYFYPSHKREVLSHNLRTLLANADLSPSELRVLHGVVRQFERHLPEK 277

Query: 244 KA 245
             
Sbjct: 278 SQ 279


>UniRef50_Q28PL2 tRNA/rRNA methyltransferase (SpoU) n=36 Tax=Rhodobacterales
           RepID=Q28PL2_JANSC
          Length = 258

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 5/244 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
             VLV      N+G+ ARAM   GL  + +V+P    P+ +A+ALA+GA  ++ NA +  
Sbjct: 16  AFVLVRPQMGENIGAAARAMWNFGLDRMRVVDPRDGWPNERAVALASGAGRLLDNAGLYQ 75

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
            L  AL+ C+ V  T+AR R L  P++ P     ++ A  A    V ++FG ER GL N 
Sbjct: 76  DLPGALSDCTYVFATTARDRGLTKPIVTPERAMEQTRAILAEGGKVGVLFGPERAGLENA 135

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++      +++  NP + SLNLA  V + AYE +          E +   +T +    ++
Sbjct: 136 DIAPADAIISVDVNPAFPSLNLAQCVLLCAYEWQRQGSTVAP--EVMALAKTDFASNLEV 193

Query: 184 ERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           E+   H E+ L   GF         +   LR L+ R      ++  L G++  + +  +G
Sbjct: 194 EKLGAHYEERLEEAGFFWPPAKADSMKLTLRNLWGRLNLTRADVQTLHGVMRQMVRWAEG 253

Query: 243 NKAE 246
            + +
Sbjct: 254 RRKD 257


>UniRef50_Q2RWJ5 RNA methyltransferase TrmH, group 1 n=5 Tax=Alphaproteobacteria
           RepID=Q2RWJ5_RHORT
          Length = 279

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 116/238 (48%), Gaps = 5/238 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD 64
            IVLV      N+G VARAM   GLT L LV P       +AIA A+GA  ++  A   +
Sbjct: 19  AIVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFE 78

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
           T + A+A  + V  T+AR R +   +L PR    +   + AA    A++FG ER GL+N+
Sbjct: 79  TTEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSND 138

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           ++      V +  NP Y SLNLA AV ++ YE   A        EQ+   +T      +L
Sbjct: 139 DVALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQA--GDATPAEQLVTNDTQPATRGEL 196

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQN 240
             F+ HLE+ L   GF+R       M   LR LF RA    QE+  L G++  +    
Sbjct: 197 LGFFDHLERELDDCGFLRNAAKRPGMVRNLRNLFERADLTEQEIRTLHGVVKELRHGR 254


>UniRef50_Q12TE2 RNA methyltransferase n=4 Tax=Methanomicrobia RepID=Q12TE2_METBU
          Length = 231

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 20/246 (8%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M  +++I+LVE  + GN+GSVARAMK  G ++L LVNP  +   +A A A+ A D++ +A
Sbjct: 1   MTLDLKIILVEPLYQGNIGSVARAMKNFGFSDLILVNPC-ELKMEARAFASHAYDILESA 59

Query: 61  HIVDTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGR 115
             V+T++EAL G  LV+ T+  +       +  P   PR+  LK      +  +A++FGR
Sbjct: 60  KTVETIEEALEGSDLVIATTGITGMKIDEHIRMPPYTPRD--LKVKFSGMSGTIAVIFGR 117

Query: 116 ERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
           E  G TNEEL+     V+I  +  Y  +NL+ AV +I YE+             +   E 
Sbjct: 118 EDHGFTNEELKLSDVIVSIPTSKIYPIMNLSHAVTIILYEMSQ-----------ILAGEN 166

Query: 176 PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                 DL   + H+++ L    +   +   +     +R+F RA+   +E+  LRG +  
Sbjct: 167 SLADGFDLRLLFEHIDEVLDDIDY-PAHKKEKTHLMFKRIFGRAQLMPREVQTLRGFIGK 225

Query: 236 IEQQNK 241
           +++  K
Sbjct: 226 VQKHIK 231


>UniRef50_A1KUH1 SpoU methylase family protein n=27 Tax=Neisseriaceae
           RepID=A1KUH1_NEIMF
          Length = 292

 Score =  214 bits (547), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 25/264 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP--------------------LVK 41
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P                      K
Sbjct: 33  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 92

Query: 42  PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+   + +
Sbjct: 93  LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVSELL 152

Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             A     VALVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+    
Sbjct: 153 QTANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 212

Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220
            +   + +Q +H        + ++    H+E  +   GF    +  ++M +++ LF RA 
Sbjct: 213 GSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 268

Query: 221 PESQELNILRGILASIEQQNKGNK 244
            ++++++ILRG   ++  +     
Sbjct: 269 TQTEDIDILRGFFNTVSHRIHKKD 292


>UniRef50_B5YGR7 RNA methyltransferase, TrmH family, group 1 n=1
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YGR7_THEYD
          Length = 252

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 8/240 (3%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+  VLVE   +GN+G+ ARA+K MG TNL L+NP V    +A  +A  + DV+  A I
Sbjct: 10  ENVYFVLVEPKESGNIGASARAIKNMGFTNLTLINP-VPLQDEAYWMAWASKDVLEKAQI 68

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              LDE+L   +L++GT+ R       ++D ++   +    A N  VA++FGRE  GL N
Sbjct: 69  FRELDESLKDKALIIGTTRRRGAKRGAIIDVKDGVKRVYEVAQNNKVAILFGREDKGLFN 128

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE++KC Y + I  +    SLNLA AV ++AYE+        E  +        Y    +
Sbjct: 129 EEVEKCGYLITIPTSLLQPSLNLAQAVLIVAYELMRC-----EELKDFHMNRQFYVSQTE 183

Query: 183 LERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           L++ Y  L + L    +I    +   +++N  R  F R      EL +L G+   IE+  
Sbjct: 184 LDKLYERLFKLLKKIDYIPDNPDIEKRIINNFRHFFGRTGLTFWELKLLHGLCTHIEELI 243


>UniRef50_D0W0D7 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Neisseria
           cinerea ATCC 14685 RepID=D0W0D7_NEICI
          Length = 330

 Score =  212 bits (541), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 137/264 (51%), Gaps = 25/264 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP--------------------LVK 41
           L NIRI+L  TSH  N+GS ARAMKTMGL  L +V P                      K
Sbjct: 71  LDNIRIILTRTSHPANIGSAARAMKTMGLHKLTIVAPNLMATPMTENPPVFDPEHPQSFK 130

Query: 42  PDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV 101
              ++  LA+GA+DV+ NA I  +LDEALA  ++    ++R R +  P+  PR+   + +
Sbjct: 131 LPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPLQTPRDLVPELL 190

Query: 102 AEAANT-PVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             A     V LVFG E  GL+ EE+Q C+  + I  NP+Y SLNLA AVQV+ YE+    
Sbjct: 191 QAANRGEKVTLVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAVQVVCYEIFSQT 250

Query: 161 LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR 220
            +   + +Q +H        + ++    H+E  +   GF    +  ++M +++ LF RA 
Sbjct: 251 DSPMTHLQQEDHA----ATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQSLFGRAN 306

Query: 221 PESQELNILRGILASIEQQNKGNK 244
            ++++++ILRG   ++  +     
Sbjct: 307 TQTEDIDILRGFFNTVSHRIHKKD 330


>UniRef50_B5IRU8 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Thermococcus
           RepID=B5IRU8_9EURY
          Length = 245

 Score =  212 bits (540), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            + ++LVE  +  N+G VARAMK   +  L LVNP  +   +A   A  A DV+ NA IV
Sbjct: 2   KVAVILVEPEYQMNIGFVARAMKNFDVKELILVNP-PELRGEAYKFAMHAKDVLENAKIV 60

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDP---RECGLKSVAEAANTPVALVFGRERVGL 120
            T+DEAL    + VGT+  S  +  P   P    E      A      + + FGRE  GL
Sbjct: 61  KTVDEALKIVDVAVGTTGISGKVYLPERTPISPEEFAK--RAFLYGGKIGIFFGRESKGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +NEEL+K  + V I  + EY  +NL+ AV V+ YE+    +  + + E+  H        
Sbjct: 119 SNEELEKMDFTVTIPTSEEYPVMNLSHAVAVVLYEIYKQRVKAEISTEENRH--LRKATR 176

Query: 181 DDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           ++ +    +  + L    +             LRR+  R+   ++E+  L G L    ++
Sbjct: 177 EEKDILVKYWSELLETLNYPKDPIRRKYFTIMLRRVIGRSFIYAREIYSLYGPLRLAIEK 236

Query: 240 NKGNKAE 246
            K  + +
Sbjct: 237 IKRYEND 243


>UniRef50_Q1K0P2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K0P2_DESAC
          Length = 243

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/237 (31%), Positives = 110/237 (46%), Gaps = 7/237 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            +VLVE    GN+G+V RAM   G+  L LV       S A+  + GA  ++G A     
Sbjct: 7   IVVLVEPRQPGNVGAVCRAMANFGVAQLRLVKSCDPFHSDAVKFSVGARPLLGQAEHFPD 66

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L  ALA     V  + R+  L   +L   E   +  + AA + VA VFGRE  GLT +E+
Sbjct: 67  LAAALADVHHSVALTRRTGRLRGNLLPLEELSQRFQSVAAQSRVAFVFGREDRGLTTQEV 126

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
             C     I    E  SLNLA AV V  YE+           ++V   +   P  D  E 
Sbjct: 127 ALCSQAATIETTDETGSLNLAQAVVVTLYELSRRQ-------DRVGIVQRDQPTHDQFEP 179

Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
            +  L++ +   G++  + P  +   LRRL  +A P+  ELN LRG++  + +  + 
Sbjct: 180 LFQQLDELVHRVGYVNPSRPEVIPTMLRRLLHQAAPDVAELNQLRGLINRLSESVQD 236


>UniRef50_C6XG74 tRNA/rRNA methyltransferase n=1 Tax=Candidatus Liberibacter
           asiaticus str. psy62 RepID=C6XG74_LIBAP
          Length = 268

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 6/242 (2%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           I+LV+     N+G VARAM    LT L LVNP    P  +A + +A A  VI +  +   
Sbjct: 17  IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNEE 124
           L EA+A    +  T+AR+R     +L P+E  +       +   V ++FGRER GLTNEE
Sbjct: 77  LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEE 136

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +   +  ++   NP + SLN++ AV ++ +E     + + E   +   E+       +L 
Sbjct: 137 IALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSEKNVK---EQNTPATKGELL 193

Query: 185 RFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            F  +LE +L   G+ R      ++++ L  +F R     +E+ +LRGI++++++ ++ +
Sbjct: 194 SFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQS 253

Query: 244 KA 245
             
Sbjct: 254 SR 255


>UniRef50_Q1IWV0 RNA methyltransferase TrmH, group 1 n=3 Tax=Deinococcus
           RepID=Q1IWV0_DEIGD
          Length = 254

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62
           N+ +VLV     GN+G+ ARAM  MG ++L +V P   P DSQA+A+A  A+D++ +A I
Sbjct: 2   NLAVVLVSPKTPGNIGAAARAMLNMGASDLRIVAPRCDPLDSQAVAMAVHAADLLRSARI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             TL EALA   L VGT+AR R    P   P +      A +A    ALVFG E  GL N
Sbjct: 62  YPTLREALADRDLSVGTTARLRADLPPPRHPAQVRPLVRAASAP---ALVFGPEETGLVN 118

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
            +L++C   V +    EY+SLNLA AV ++ YE   A   T     +    +T     ++
Sbjct: 119 SDLEQCQVTVRVPTA-EYASLNLAQAVLLVCYEFLQAQDETAPKSTRTAERKT--ATREE 175

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           +E  YGHL +T+   G+         +   R +  RA   S E  + RG L  +  + + 
Sbjct: 176 MEALYGHLHETMALIGYTDAVRARHTLRLWRAMLDRALMSSAESRLFRGFLRQVRWKVED 235


>UniRef50_A5GRX6 TRNA/rRNA methyltransferase n=16 Tax=cellular organisms
           RepID=A5GRX6_SYNR3
          Length = 248

 Score =  211 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 5/243 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59
           M  ++ +VLVE S   N+GSVAR     G+ +L LV P   P    A  +A    + +  
Sbjct: 1   MTAHLAVVLVEPSGPLNVGSVARLCANFGVASLRLVAPRCDPTDPQAKQMAVRGLEQLLA 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERV 118
             +  +L++A+A C  VV  S R        L P+      +  +     VALVFGRE  
Sbjct: 61  CELYPSLEDAVADCRRVVACSGRVEAKEREHLLPQPALQWLLEPKPGPNHVALVFGREDH 120

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL + EL      + I  +  Y SLNL+ AV +   E +       ++         P P
Sbjct: 121 GLHSSELNLAGKLLRIPTSEAYGSLNLSHAVAICLAEHQRLAHVPMDSASDS---SPPLP 177

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
               LE      E+ LL  GF+  +     M KLR+L  R+ P   E+ +LRG++  +  
Sbjct: 178 AHAALEAAMQDAEELLLEVGFLYPHTAAARMAKLRQLMLRSEPSEAEVALLRGMVRQLRW 237

Query: 239 QNK 241
            ++
Sbjct: 238 ASR 240


>UniRef50_Q0W2E0 RRNA methyltransferase (SpoU family) n=3 Tax=Euryarchaeota
           RepID=Q0W2E0_UNCMA
          Length = 249

 Score =  210 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 20/247 (8%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE +  GN+GSV RAMK  G  +L LV P  +  + A A+A+ A D++ +A IV
Sbjct: 8   HVRVVLVEPAFEGNVGSVCRAMKNFGFDDLVLVRPC-ELGNSAKAMASHAQDLLASAAIV 66

Query: 64  DTLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           DT++EAL G S++VGT+ +        +  P   PRE  LK++ E     VAL+FG+E  
Sbjct: 67  DTVEEALDGVSVIVGTTGKPGSSTREHIRMPCFSPRE--LKTLLEDKQGTVALLFGKENH 124

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NE L+KC   ++I  + +Y  +NL+ AV V+ YE+             ++  +    
Sbjct: 125 GLPNEILEKCGVVLSIPTSDDYPVMNLSHAVAVVLYEL-----------ADIKGNDFLLA 173

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             +  E  Y H+EQ L +  +       +    +RR+  RA    +E   L G++  I+ 
Sbjct: 174 DSEMQEILYQHVEQLLDSINYADY-KKDKTSLMIRRIIGRAMISPREYFTLMGLIRDIQL 232

Query: 239 QNKGNKA 245
                +A
Sbjct: 233 ALARAEA 239


>UniRef50_A1VM17 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Comamonadaceae
           RepID=A1VM17_POLNA
          Length = 311

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 22/257 (8%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62
           R +L+ TSH GN+G+ ARAMKTMG  +L LV P    V    + I  A+GA DV+ NA I
Sbjct: 40  RFILINTSHAGNVGATARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLNNARI 99

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPR----------------ECGLKSVAEAAN 106
           V+TLDEAL G + +  T+   R    P   PR                E G         
Sbjct: 100 VETLDEALDGMAHLCATAMTPRDFGPPTRAPRAHFAELLGRSEALLKQELGTPVHPAQRP 159

Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
             VA +FG ER G+ NE++ +CH  ++I  +P++ SLNL  AVQ+IAY+ R A       
Sbjct: 160 DSVAFLFGSERFGMQNEDVYRCHVALSIPTDPKFGSLNLGAAVQLIAYDWREALGGF--- 216

Query: 167 GEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226
           G Q   EE        +     H E+ L+  GF+    P ++M +L +LF RA+   +E+
Sbjct: 217 GIQAAIEEPRLADAAAVSGMLKHWEEALVDIGFLDPASPKKLMPRLNQLFNRAQLSPEEI 276

Query: 227 NILRGILASIEQQNKGN 243
           +ILRG+  ++ +     
Sbjct: 277 HILRGVAKAMMRHAPDK 293


>UniRef50_A4SX57 RNA methyltransferase, TrmH family, group 1 n=2
           Tax=Polynucleobacter necessarius RepID=A4SX57_POLSQ
          Length = 250

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 6/238 (2%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP---DSQAIALAAGASDVIGNAH 61
           +R VLVETSH GN+GS ARA+KTMG  +L LVNP        ++AIALA+GA DV+  A 
Sbjct: 9   LRWVLVETSHPGNVGSAARALKTMGFHDLRLVNPKTLDISTQAEAIALASGAVDVLETAT 68

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERVGL 120
           +  +L++A+  CSLV+G ++R R    P LD      L S   A    VA+VFG ER GL
Sbjct: 69  VSGSLEDAVQNCSLVLGLTSRDREFGPPALDWESARALISETVANQGQVAMVFGTERTGL 128

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY--P 178
            NE L  C + V + ANP+Y SLNLA A+ V AY +R  +    +               
Sbjct: 129 ENEHLALCTHRVWLNANPDYPSLNLAQALMVCAYALRETFENRTQTTLTSADINDGVDFA 188

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               +     H  + L A G++   HP ++M + + LF R+R   +E+++LRGI   +
Sbjct: 189 DPIAVAAMLEHWREGLEAIGYLDPAHPKKLMPRFQALFARSRLRKEEIDLLRGIAKQM 246


>UniRef50_C8R186 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Desulfurivibrio
           alkaliphilus AHT2 RepID=C8R186_9DELT
          Length = 304

 Score =  207 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 103/238 (43%), Gaps = 4/238 (1%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDT 65
           IVL       N+GS AR    MG+ +L +V        + +  A   A+ +I       T
Sbjct: 19  IVLKNPKFEENIGSAARIAMNMGIPSLIVVGEREYQRDKMLKTATHKAAALIDRLERHAT 78

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           + EALA    V+ TSAR          PR     ++   A   VAL+FG E  GLTNE+L
Sbjct: 79  VAEALAPFGRVIATSARQGRQRGMCPPPRTAMQAALPYLAANRVALLFGPEDRGLTNEDL 138

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
             CH    I    ++SSLNLA AV V+ YE+  A    Q     V         V +LE 
Sbjct: 139 YLCHQLTTIPTA-DFSSLNLAQAVAVLCYELHTAAHEAQTGRGPVVRPA--LATVHELEA 195

Query: 186 FYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
            YGH+EQ L   GF+R       M  +R L  R    ++E  ++RG        +   
Sbjct: 196 MYGHVEQVLQKVGFLRPEDSSYWMKNIRSLLGRVGLRAKEARVVRGFCRQFLWYDAQR 253


>UniRef50_Q31MT7 RNA methyltransferase TrmH, group 1 n=2 Tax=Synechococcus elongatus
           RepID=Q31MT7_SYNE7
          Length = 245

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 10/242 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63
           +RIVLVE +   N+G++AR M   GL++  +V P       +A  +A  A+ ++  A +V
Sbjct: 3   LRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVLV 62

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           D L  AL GC  V  T+ +      P+  P +            P AL+FGRE  GL   
Sbjct: 63  DNLPSALEGCQWVAATTGQRDLRDLPLESPTQILPWLRQ----GPAALIFGREDSGLQRS 118

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL     ++    +P Y SLNLA AV +  Y    A L+  ++    + E +P  +    
Sbjct: 119 ELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYHY--ACLSEADSRGVPQQESSPAAVRAAF 176

Query: 184 ERFYGH---LEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           E+ +G+   LE  LL  G++  +     M K+R +  R+   ++E+ +LRG++  +    
Sbjct: 177 EQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQLNWAL 236

Query: 241 KG 242
             
Sbjct: 237 NQ 238


>UniRef50_B5IGT4 RNA methyltransferase, TrmH family, group 1 n=3
           Tax=Aciduliprofundum boonei T469 RepID=B5IGT4_9EURY
          Length = 243

 Score =  204 bits (519), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 101/247 (40%), Gaps = 17/247 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I IV VE   TGN+G +AR M   G  NL LVNP  + D  A   +  A  +I NA 
Sbjct: 8   FMQIHIVFVEPQFTGNIGFLARTMANFGFKNLILVNP-PELDEDAYRFSKHARYIIENAE 66

Query: 62  IVDTLDEALAGCSLVVGTSARS----RTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
           I++  +E       +V TS  S    +      L PRE   K      +  + +VFGRE 
Sbjct: 67  ILNNFEELRRSLDYLVATSGVSTKSPKKFKRIALTPREFAQKVWN--FSGNIGIVFGREN 124

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL NEE++KC   + I  + EY  +N+  A  +I YE+ M         E+ E E  P 
Sbjct: 125 YGLYNEEIEKCDSLITIPTSEEYPIMNITHAAAIILYEIFM---------EKREEEGMPL 175

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
               +         + L    F   +         RR+  RA     E + + G++  I 
Sbjct: 176 AEEFESNLLNERFSELLGLINFPD-HKRKNTEVMFRRIIGRAMLTKWEYHSMMGVMKRII 234

Query: 238 QQNKGNK 244
              +   
Sbjct: 235 YAIQAKD 241


>UniRef50_Q31AG9 RNA methyltransferase TrmH, group 1 n=7 Tax=Prochlorococcus marinus
           RepID=Q31AG9_PROM9
          Length = 249

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 6/246 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNA 60
             N++++LVE +   N+GSVAR      +  L +V+P     S +A  +A      + + 
Sbjct: 7   FSNLKVILVEPNGPLNVGSVARLCSNFEVDELRIVSPKCDIFSLKAKKMALKGQKYLDHC 66

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVG 119
            I D L+ A+  C LV+ +  R       + +  E  +  +        +A++FGRE  G
Sbjct: 67  KIFDNLENAIFDCDLVIASCGRIDVSKDSVFESSEDIVSWILSFEKINNLAIIFGREDRG 126

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L+N EL   +    I  +    SLNL+ AV ++ YE+  +           E E      
Sbjct: 127 LSNNELLLANKTFNIPTSKNNPSLNLSHAVSIVLYELNKSSKRNFNK----ELEVFNLAS 182

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
              +   +  +E+ LL  G++ E+     ++K +   +RA     E+N+LRGI+  I   
Sbjct: 183 SKQIHDSFVEIEEMLLGVGYLLEHTSKAKISKFKNYLSRANTTMHEINVLRGIVHQINWF 242

Query: 240 NKGNKA 245
              +K 
Sbjct: 243 LNNSKR 248


>UniRef50_Q58871 Uncharacterized tRNA/rRNA methyltransferase MJ1476 n=12
           Tax=Methanococcales RepID=Y1476_METJA
          Length = 230

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 10/237 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  I ++LV   ++GN+GS+AR M   G   L +V      +++A  +A  A +++ NA
Sbjct: 1   MIIMISVILVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIINNEAYMMAVHAREILDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSAR---SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRER 117
              +T DEA+     V+ TS      R L    + P+E   K +       + +VFGRE 
Sbjct: 61  KFYNTFDEAIGDLDFVIATSGARGGDRNLKRVPITPKELADKILEV--KGNIGIVFGRED 118

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
            GL NEE+ KC   V+I  + +Y  +NL+ AV VI YE+      T++   +        
Sbjct: 119 DGLRNEEIDKCDLLVSIPTSEKYPIMNLSHAVAVILYEIY-----TKKVRNKFLDINMRE 173

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
              +D E       + +     I E+         +RL  RA    +E   L     
Sbjct: 174 ASKEDKELLIRKFNEFIDKNEKIPEHKKELCKIIFKRLVNRAFISGKEAWTLMSAFK 230


>UniRef50_Q2G643 tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans
           DSM 12444 RepID=Q2G643_NOVAD
          Length = 251

 Score =  202 bits (516), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 8/242 (3%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVDT 65
           IVLV      N+G  ARAM   GL  + LV+P    P+  A   AAGA  V+  A +  T
Sbjct: 13  IVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPT 72

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L EA+A CS V  T+ R R +  P+L P +        +A+   A++FG ER GL  +++
Sbjct: 73  LAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDI--VSASGRSAIIFGPERSGLETDDV 130

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLER 185
                 V +  NPE+ SLNLA AV + AYE        Q   E +     P    ++ E 
Sbjct: 131 ALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDM----LPPAPQEEFEG 186

Query: 186 FYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
            +  L   L   G+             LR + T+      E+  +RG+L+++ ++     
Sbjct: 187 MFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRRKPGSRP 246

Query: 245 AE 246
            +
Sbjct: 247 GD 248


>UniRef50_D1JIN9 Putative tRNA/rRNA methyltransferase n=1 Tax=uncultured archaeon
           RepID=D1JIN9_9ARCH
          Length = 234

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 20/242 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +RI+LVE     N+G+VAR  K  G ++L++VNP  +   +A+++AA A DV+ +  IVD
Sbjct: 3   VRIILVEPKSEENVGAVARVTKNFGFSDLYIVNP-PEIGIKALSVAAHAYDVLQSCKIVD 61

Query: 65  TLDEALAGCSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           +L  A+A  ++V GT+A+        L  P   P E  LK         ++++FGRE VG
Sbjct: 62  SLPVAIANSAIVAGTTAKLGASTNKHLRMPFFLPLE--LKDKVAGKRGILSILFGREDVG 119

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L N+EL+ C   V+I  +PEY  +NL+ AV VI YE+      T E              
Sbjct: 120 LLNDELKLCDLVVSIPTSPEYPVMNLSHAVAVILYELSDTISGTLE-----------LAP 168

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
           V+D ER Y  L+  L   G+ RE+   + +  LRR+  RA   ++EL  L+GI+   E +
Sbjct: 169 VEDRERLYMQLKTFLDEIGY-REHKKAKTLLMLRRILGRAELTTKELQTLQGIIGKAEWR 227

Query: 240 NK 241
             
Sbjct: 228 IG 229


>UniRef50_C1A9A6 Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27
           RepID=C1A9A6_GEMAT
          Length = 283

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 6/246 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +L  + +VL E+  + N+G V RAMK MG+ +L L+ P     ++   +A    D++   
Sbjct: 5   ILNAVTVVLYESQDSINIGGVVRAMKNMGVRDLRLIRPCPYDPNRVEQVAHDTRDIVERI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              +T+DEALA C  VVG S R +   W    PR   +  +  A    VA++FGRE  GL
Sbjct: 65  QHFETIDEALADCVYVVGFSGRRQAARWQRHTPRTAAVDLLEFAQQGRVAIMFGREDHGL 124

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NE L + +    I     + SLN+A A  +  YE+ M      +      H     P  
Sbjct: 125 PNEALDRSNAICTIPTTEHF-SLNVAQACLLALYELHMLAGDATKRLPPPRHAA-GSPSK 182

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG----ILASI 236
           DD+ER +  +   L A  +    +   +M   R L  RA P+ +EL ++R     +L +I
Sbjct: 183 DDVERTFADMRNALTAIRYFGTRNEELMMRTFRSLVFRANPDQRELLLIRTASIEVLRTI 242

Query: 237 EQQNKG 242
           E++ + 
Sbjct: 243 ERETRQ 248


>UniRef50_Q46JZ1 RNA methyltransferase TrmH, group 1 n=4 Tax=Prochlorococcus marinus
           RepID=Q46JZ1_PROMT
          Length = 245

 Score =  201 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 4/241 (1%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63
           ++++LVE +   N+GSVAR  +   +  L LV+P     + +A  +A     ++  A + 
Sbjct: 7   LKVILVEPAGPINVGSVARLCENFSVHELRLVSPKCDYLAQEAKKMAVRGLKILEKAKVY 66

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L+ AL+ CS ++ T  R      P+   ++     +       +ALVFGRE  GL+NE
Sbjct: 67  EDLNSALSDCSRIIATCGRKEHGEIPLNSNKDALSWGLKSEREDTIALVFGREDRGLSNE 126

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL K +  +++  + +Y SLNL+ AV ++ ++                 + +    +  L
Sbjct: 127 ELLKANKVISLNTSEDYPSLNLSHAVAIVLHQFNQLNDLDLLKRHT---KISSPANLIKL 183

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           E         LL  GF+ ++     M K+++L  R   +  E+ ++RGI++    + K  
Sbjct: 184 EDCINDAGSLLLDIGFLMKHTYKAKMTKIKQLLLRGEIKDDEVALIRGIISQARWKIKNK 243

Query: 244 K 244
            
Sbjct: 244 S 244


>UniRef50_O74022 SpoU protein n=2 Tax=Thermococcaceae RepID=O74022_9EURY
          Length = 235

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 11/242 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G + L L+NP      ++ A A  A DV+ NA I+D
Sbjct: 2   ISVVLVEPEGPANIGMIARTMKNFGFSRLVLINPN--LTEESYAYAVHARDVLENALILD 59

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + ++AL      VGT+ +      P   P     L  + +     V + FGRE +GL NE
Sbjct: 60  SFEKALELFDFTVGTTGKPGKRFIPHRAPLMPWELVGLIKDYPGEVGIFFGRESIGLKNE 119

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL      + I  + EY  +NLA A  V+ YE+            +   E       ++ 
Sbjct: 120 ELDAMDVTLTIPTSEEYPVMNLAQAAAVVLYELSKKR-------PEPYVEALKPATREEK 172

Query: 184 ERFYGHLEQTLLATGFIRE-NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           E      E+ L    + ++       +   +R   RA    +E++ L G L    ++ + 
Sbjct: 173 EALVRTWEKLLNTLDYPKDAERRDVFVKVFQRAVGRAFLYGREVHTLIGPLRKALKRLEE 232

Query: 243 NK 244
            +
Sbjct: 233 CR 234


>UniRef50_C6XNM7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hirschia baltica ATCC
           49814 RepID=C6XNM7_HIRBI
          Length = 253

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LV      N+G+ AR M   GL +L ++NP    P+ +A  ++AGA +    A + D
Sbjct: 11  AIILVSPQMGENIGATARVMANFGLKDLRIINPRDGWPNDKADTMSAGAFEWGVEAKVFD 70

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           TL+  LA  + V+ T+AR R +  P+ +  E     ++      V ++FG E+ GL NE+
Sbjct: 71  TLEAGLADLTYVLATTARPRGMEKPVFNAEEGIGALMSRPDVG-VGVMFGAEKAGLLNED 129

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           +      +    +  +SSLNLA AV V A+      L  +   E     ++     + L 
Sbjct: 130 VALADGILTYPVDRSFSSLNLAQAVGVFAHSWAARTLEGEAKKEFAGVGDS--ADREQLV 187

Query: 185 RFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           R + H E  L   GF        VM   LR  F RA+  +QE+   RG + ++       
Sbjct: 188 RMFEHFEDELDRAGFFFPAEKRPVMTQNLRNAFIRAQWTNQEVQTFRGAVKALALGRGKA 247

Query: 244 KAE 246
           + +
Sbjct: 248 RID 250


>UniRef50_Q0AQY2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Hyphomonadaceae
           RepID=Q0AQY2_MARMM
          Length = 249

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 9/242 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
             +L       N+G+ AR M   GL  L +V+P    P+ +A+ ++AG S V+GNA +  
Sbjct: 9   AFILHTPQLGENIGAAARVMGNFGLPELVVVDPRDGWPNDKAVTMSAG-SPVLGNARVEY 67

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTNE 123
            L +A+   + +  T+AR R +  P++  RE      A   A   VA++FG E+ GL NE
Sbjct: 68  RLGDAIHDTTRLYATTARPRGMEKPVMTAREAVSDMKAAIEAGEKVAVMFGGEKSGLPNE 127

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
            +      + +  +  +SSLNLA AV VIAYE         E         +     +DL
Sbjct: 128 AVNMADVIITLPVDRSFSSLNLAQAVAVIAYEW-----TAGEGAPAEFEPVSDVAKREDL 182

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVM-NKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           ER + H E  L   GF        +M   LR  F R R   QE+   RG + ++      
Sbjct: 183 ERMFEHFETELERAGFFHPPSKTPLMVQNLRNAFIRGRWTEQEVRTFRGAVKALTLGRGK 242

Query: 243 NK 244
            +
Sbjct: 243 AR 244


>UniRef50_Q8TXY9 rRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXY9_METKA
          Length = 234

 Score =  197 bits (503), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 11/242 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           ++R+VLVE  + GN+G VAR MK  G+  L+LV P  +    AIA A  A D++ NA IV
Sbjct: 2   DVRVVLVEPKYDGNIGHVARVMKNFGVKELFLVRPRSELGEVAIARAMHALDLLENAVIV 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           +TL+EA+      + T+A       P  +P        A +    +A+VFG E  GL   
Sbjct: 62  NTLEEAIEDVEAAIATTAVL--ASTPARNPMMPWEVREAFSDYEKIAVVFGPEDRGLRTW 119

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E++ C   + I  + EY S+NL+ +V V+ YE++          E V           + 
Sbjct: 120 EVELCDATLHIPTSEEYRSMNLSHSVAVVLYELKKM--------EYVPERYGRAATKREK 171

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGN 243
           E     L+  + A  F        V    RR   RAR   +E+  L  I    +++  G 
Sbjct: 172 EVLVKSLDDLMKALNF-DSTRRENVCTTFRRFLARARCTDKEIKALLWIFEKAKRRVLGV 230

Query: 244 KA 245
           K 
Sbjct: 231 KR 232


>UniRef50_C5A3L4 RNA methyltransferase (SpoU/TrmH) n=2 Tax=Thermococcus
           RepID=C5A3L4_THEGJ
          Length = 243

 Score =  196 bits (500), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 105/243 (43%), Gaps = 13/243 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+    +VLVE     N+G VAR MK  G + L LVNP      ++ + A  A DV+ NA
Sbjct: 10  MMP--SVVLVEPEGPANIGMVARTMKNFGFSRLVLVNPN--LSEESYSYAVHARDVLKNA 65

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDP-RECGLKSVAEAANTPVALVFGRERVG 119
            IV+T +EAL    L VGT+ +          P     L+   +     V L FGRE +G
Sbjct: 66  TIVETFEEALELFDLTVGTTGKPGRRFISYRAPLYPWELRETLKGYTGEVGLFFGRESIG 125

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL++    V I  + +Y  +NLA AV VI YE+            +   E      
Sbjct: 126 LKNEELERLDLIVTIPTSEDYPVMNLAQAVAVILYELSKTR-------PEPSVEALKPAT 178

Query: 180 VDDLERFYGHLEQTLLATGFI-RENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            D+ E       + L    +   E      +   R+   +A    +E++ L G L    +
Sbjct: 179 RDEKEALVRVWAELLKVLEYPKDEERREVFVKVFRKAVGKAFLYGREVHTLIGPLRRAVK 238

Query: 239 QNK 241
           + +
Sbjct: 239 RLE 241


>UniRef50_C8S7Y1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Ferroglobus
           placidus DSM 10642 RepID=C8S7Y1_FERPL
          Length = 230

 Score =  196 bits (499), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 22/246 (8%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE     N+G +AR MK  G   L L N       ++   AA A DV+  A  V+
Sbjct: 2   IEVVLVELKIPENIGFIARVMKNFGFEKLVLYN--CNVSKESYITAAHAKDVLDKAVKVE 59

Query: 65  TLDEALAGCSLVVGTSAR-----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
            L E L   +LVVGT+        R +  P   P E              A++FGRE  G
Sbjct: 60  NLKEYLEEKNLVVGTTGVRSRRVERYIRRPYYTPEELREMI-----KGETAILFGREDYG 114

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L +EEL+ C+  V++  + EY  +N++ A  VI YE+            + E E+     
Sbjct: 115 LYDEELKLCNVIVSVPTSEEYPVMNVSHAAAVILYELSK---------GKFEFEKEEIAT 165

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             D++R   + E+ + +  F  E+  G++   L+R F RA     E++ + GI+      
Sbjct: 166 QKDVDRLVEYFEKLMKSIWF-PEHRIGRMKVVLKRAFGRAALTKYEVDAISGIIRKTLLY 224

Query: 240 NKGNKA 245
            +  K 
Sbjct: 225 LEELKK 230


>UniRef50_Q4FLI9 SpoU rRNA Methylase family n=3 Tax=Candidatus Pelagibacter
           RepID=Q4FLI9_PELUB
          Length = 237

 Score =  196 bits (499), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 8/240 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNA 60
             NI  +L +   + N+G+ ARA+K      L +V P    P+ + +A + GA D+I NA
Sbjct: 3   FNNISFILHQPQLSENIGACARAVKNFNFKKLVIVKPKPIFPNDKILATSVGAKDLIINA 62

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + +TL+ A+     VV TSAR R      ++  +          N  +A +FG E  GL
Sbjct: 63  KVHETLESAVKKVDYVVATSARFRNKNIKHINLDD----LKKIDFNKKIAFLFGSEASGL 118

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N E+   +Y + I  NP++ SLNL+ +V +IA+ V  A +   +  +  + ++      
Sbjct: 119 SNNEISYANYTMQIPTNPDFKSLNLSHSVIIIAHTV--ASIINLKGAKYSKSKKVNLASK 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQ 239
            D++       + L    F +      +M   LR +F++     +E  IL  + AS+ ++
Sbjct: 177 KDIQAMTNLCIKKLEEKHFFKPLEKRPIMLENLRSIFSKMELSEKETRILSSVFASLSKK 236


>UniRef50_A5UK71 rRNA methylase, SpoU family n=6 Tax=Methanobacteriaceae
           RepID=A5UK71_METS3
          Length = 301

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 11/242 (4%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            NI IV VE    GN+G +AR M   GL NL L+NP      +A   A     ++ NA I
Sbjct: 68  NNIYIVFVECETPGNIGFLARTMANFGLKNLVLINPPT-LTPEAFYQATHGKYIVDNAKI 126

Query: 63  VDTLDEALA--GCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             TLDE          V ++  +         P            N   A++FGRE  GL
Sbjct: 127 YHTLDEFYQSQRIDFKVASTGVAGGSYNLSRIPVRPENLGKNINTNNKTAILFGREGNGL 186

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEE++ C   V+I  +P Y  LN++ A  +I YE+                E       
Sbjct: 187 TNEEIEDCDICVSIPTDPTYPILNISHAAAIIFYELFKNMHE-------YPVEGLEESTA 239

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            + E     +   +     I E+     +   + +  RA    +E + L+GIL  ++ + 
Sbjct: 240 IEKEYVLKDMYDLIDGLD-IPEHKKKNGLKSFKNIINRAYITGREAHTLKGILRRLKMKM 298

Query: 241 KG 242
             
Sbjct: 299 GK 300


>UniRef50_C1F137 RNA methyltransferase, TrmH family n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F137_ACIC5
          Length = 240

 Score =  194 bits (493), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 7/240 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
             I +VLV T +  N+G+ ARAM   G  +L +V P      +A   A GA+ ++ +A  
Sbjct: 8   PAIAVVLVRTRNPLNIGAAARAMINFGFHDLRVVEPFDLAWQEA-RSAVGAASILASARE 66

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             TL +A+A C+ V+GTSA     P   +      L  +A+     +ALVFG+E+ GLTN
Sbjct: 67  CSTLADAVADCTCVLGTSAIGDRQPLQPIVDLPAALPWLAQRVAGRIALVFGQEKHGLTN 126

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
            +L  C   + I   PE +S+NL  AV V  YE   +  A          E        D
Sbjct: 127 HDLSHCDAILRIPTLPEQASMNLGQAVAVCLYEFARSGHAPTA------TEAPKAAPAAD 180

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           LER    L + L  +G+I+       + + R L  R     ++ ++L G+LA IE++   
Sbjct: 181 LERLTASLHRLLCISGYIKPIAAQGALLEARALIHRLTLNREDTHLLTGMLAKIERKLAR 240


>UniRef50_A8F0M5 tRNA/rRNA methyltransferase n=13 Tax=Rickettsia RepID=A8F0M5_RICM5
          Length = 233

 Score =  194 bits (493), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHI 62
           N  I+L+      N+G+ ARAMK  GL  L +V P    P+ QA + A GA ++I +A I
Sbjct: 5   NPIIILIAPQMGANIGATARAMKNFGLNELRIVAPRDGWPNEQARSNAVGAVNIIDHAKI 64

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            D+L++++     +  T+   R +    +  +   L       +  V ++FGRE  GL+N
Sbjct: 65  FDSLEDSIKDLEYLYATTCIKRAMNKDYVFSQNLPLDY---PNSEKVGIMFGRENNGLSN 121

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EE+   +  + I    ++SSLN+A AV +I YE+       ++      H        ++
Sbjct: 122 EEIAFANKIITINTT-KFSSLNIAQAVIIICYELFRNSTPRED-----VHNIQKLATKEE 175

Query: 183 LERFYGHLEQTLLATGFIR-ENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIE 237
           +E F  +L   L   GF +  +    +   +  +FTR     S E+  L+GI+ S+ 
Sbjct: 176 IEHFLVNLFGKLDKAGFFKAPDKKPAMQQNITNIFTRINSLSSPEVQTLQGIIKSLN 232


>UniRef50_D2RG27 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Archaeoglobus
           profundus DSM 5631 RepID=D2RG27_ARCPR
          Length = 234

 Score =  193 bits (491), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 19/246 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I + LV      N+G VAR MK  G   L+L N   K  + +   A+ A D++ NA ++ 
Sbjct: 2   ISVYLVGLKIPENVGFVARVMKNFGFEKLYLYN--CKVTTVSFKTASHARDILRNAVVLR 59

Query: 65  TLDEALAGCSLVVGTSA-----RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             D+ L   +++VGT+        R +  P+  P E   ++  E     +A+ FGRE  G
Sbjct: 60  KFDDILDHVNMLVGTTGVTAYSYERYIRKPIFTPEEF--RNFLEGKKGEIAVAFGREDYG 117

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           L NEEL+ CH  V++  NPEY  +N++ AV VI YE+            +   E+     
Sbjct: 118 LFNEELELCHMLVSVPTNPEYPVMNVSHAVAVILYELSK---------GKYGLEDKTIVT 168

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
             ++E+   + E+ +L T + R +   +    LRR+  R+    +EL +L GI+      
Sbjct: 169 AREIEKLVENFEKLMLETWYPR-HRIERTKIALRRILGRSLITRRELAVLHGIVTKALTY 227

Query: 240 NKGNKA 245
            +  K 
Sbjct: 228 IQHLKK 233


>UniRef50_D2LIP4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodomicrobium vannielii
           ATCC 17100 RepID=D2LIP4_RHOVA
          Length = 263

 Score =  193 bits (491), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+LVE     N+G+ ARAM   GL  L LV P    P+  A A AA A +++  A +  
Sbjct: 11  AIILVEPQLGENIGAAARAMANFGLRELRLVAPRDGWPNEAARASAALAVEIVDGARLYP 70

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA-EAANTPVALVFGRERVGLTNE 123
            L  A+A    +V T+ARSR L  P+L P     +    +AA+    ++FG+ER GL N 
Sbjct: 71  DLATAVADLHYIVATTARSRFLAKPVLAPDTAVTEIAERQAADLRCGVLFGKERTGLENS 130

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM--------AWLATQENGEQVEHEET 175
           ++      +    +P ++SLNLA +V + AYE R           L     G     + +
Sbjct: 131 DVAIADAIMTAPVDPAFASLNLAQSVLLFAYEWRKLVNPHSLGRTLPDAPLGAGHRFKAS 190

Query: 176 PYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
                 +L  FY HLE  L   GF         ++N +R +F R  P  QE+  LRG++A
Sbjct: 191 RPAERGELIAFYEHLEGELDHCGFLFPPEKRETMVNNIRTMFARMAPTEQEVRTLRGMVA 250

Query: 235 SIEQ 238
            + +
Sbjct: 251 ILRR 254


>UniRef50_Q02AK8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria
           RepID=Q02AK8_SOLUE
          Length = 252

 Score =  193 bits (491), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 7/241 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
            N+R+VLV T +  N+G+ ARAM   G + L +V P      +A   A GA+ ++  A  
Sbjct: 18  NNLRVVLVSTRNPLNIGAAARAMANFGFSRLGVVAPYDVAFREA-RSAVGAAPLLQKAEE 76

Query: 63  VDTLDEALAGCSLVVGTSARS-RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             ++  A+A C LVVGT++   R L  P+          +      PVAL+FG E+ GL+
Sbjct: 77  FPSVAAAVADCRLVVGTTSVGHRELQHPIRRLEYGARLMLKGLPAAPVALLFGSEKFGLS 136

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           NE+L  CH+ + I    +  S+NL  AV +  YE+                E+       
Sbjct: 137 NEDLSHCHWLMRIPTVGQDLSMNLGQAVALCLYELAR-----DPKAALASPEKIRSANAG 191

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           +LE+    L + L  +G++          K+RRL  R     ++  ++ G+L  I  + +
Sbjct: 192 ELEQITTRLLEVLNRSGYVNPVTSISTDEKVRRLVRRLEIPGRDAKVILGMLRQILWKLE 251

Query: 242 G 242
            
Sbjct: 252 N 252


>UniRef50_B8EQU7 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Alphaproteobacteria
           RepID=B8EQU7_METSB
          Length = 281

 Score =  191 bits (487), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 13/249 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ------AIALAAGASDVIGN 59
            I+LV      N+G  ARAM   GL++L LV+P             A A AAGA  ++  
Sbjct: 18  AIILVRPQLAVNIGMCARAMANFGLSDLRLVSPREGWPRTGALKKGAHAAAAGAVHLLEG 77

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPREC-GLKSVAEAANTPVALVFGRERV 118
           A + DT +EA+A  + V  T+AR R    P+L P E     ++A A      ++FG ER 
Sbjct: 78  AKLYDTPEEAVADLNFVFATTARERGQHKPVLTPAEALPGAALAIAGGAKGGVMFGPERT 137

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL+N+E+      +    NP Y+SLNLA AV +I YE   A  +T+     V    +P  
Sbjct: 138 GLSNDEVALADRLITFPVNPAYASLNLAQAVLLIGYEWMRA--STEAKAPFVADPRSPPA 195

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNK-LRRLFTRARPESQELNILRGILASIE 237
             + +  F+ +LE  L   GF R      VM + ++ +F R    +Q+++ LRG   +I 
Sbjct: 196 PREMVLSFFAYLEGELERVGFFRPLDKAPVMRRNIKNIFHRLDLSAQDVSTLRG---AIV 252

Query: 238 QQNKGNKAE 246
           +  +G +AE
Sbjct: 253 RLVEGPRAE 261


>UniRef50_Q3IPH4 Probable tRNA/rRNA methyltransferase n=1 Tax=Natronomonas pharaonis
           DSM 2160 RepID=Q3IPH4_NATPD
          Length = 264

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 10/238 (4%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGN 59
           + NI + +V     GN+G++AR+MK  GL+ L+LV+P    PD +A   A  A  DV+ N
Sbjct: 1   MPNIAVAVVGAETPGNVGTIARSMKNFGLSELYLVDPPELDPDGEAYGFAGHAREDVLPN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDP--RECGLKSVAEAANTPVALVFGRER 117
           A  V+           V  T+  +      +  P      L       +  V +VFGRER
Sbjct: 61  ATEVE-FSYLTEQFYTVACTATTNEDATKHVRYPFIEPAALSDELAGLDADVCIVFGRER 119

Query: 118 VGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPY 177
           VGLTN+EL +     +I A+ +Y  LNLA A  ++ YE+R   +   ++ +Q        
Sbjct: 120 VGLTNDELAQLDRICSIPADGDYPVLNLAQAATIVLYELRELTVEETQHPKQAHER---- 175

Query: 178 PLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
               ++E  +    + L   G   E    +     RRL  RA P  +E   LRG+L  
Sbjct: 176 ADEHEIEGLHETFSEYLHEVGH-PEEKIPKTERLFRRLAGRASPTGREARTLRGVLRR 232


>UniRef50_A9WAF6 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Chloroflexus
           RepID=A9WAF6_CHLAA
          Length = 239

 Score =  190 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 5/243 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + +I ++L +     N+G+V RAM   G  +L LV+P     +   A+A     V+ N  
Sbjct: 1   MNDIIVILHQPRDPRNIGAVVRAMLNTGCHHLRLVDPCPFDPATISAVAHRPDPVLANLT 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGL 120
           +   L EA+A    +VGTS R         D R+   ++   AA   PVA++FG E  GL
Sbjct: 61  VHAHLSEAIADIRYLVGTSDRPHPGLPWRNDVRQWANETRQRAASTGPVAILFGSEGNGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + +EL  C   + +    +Y  LNLA AV ++ YE++             E        +
Sbjct: 121 SRDELVLCQEILGLPMASDYPVLNLAQAVLLVLYELQQVTTPLAPPPPPGEP----PATL 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
              E  Y  +   +  T F++      +  +LR +  RA    ++  +L  +L  + ++ 
Sbjct: 177 AARESLYTAVADLISTTNFVKSGTGQALHQRLRTIIARADLSERDAAVLTALLREVLRKL 236

Query: 241 KGN 243
           +  
Sbjct: 237 ERR 239


>UniRef50_Q1DAL2 RNA methyltransferase, TrmH family n=2 Tax=Cystobacterineae
           RepID=Q1DAL2_MYXXD
          Length = 243

 Score =  189 bits (481), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 5/240 (2%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           + + +VL +T  T N+G+VAR M   G + L L  P++K    A  LA  +  V+    +
Sbjct: 5   EQLTVVLHQTRSTDNLGAVARIMANFGYSRLILSEPVLKSIEGAERLAVKSDFVLRGMEV 64

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              L EAL  C   VGT++R++     +L P E   +   E+    VALVFG E+ G+++
Sbjct: 65  TSDLGEALKDCVYAVGTTSRTQLKGRTVLTPEEAMQRLAEESVRGRVALVFGGEQRGMSD 124

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           E+L +C   +AI  +    S+NLA +  V+ Y      L           EE P   +  
Sbjct: 125 EDLARCTDVLAIPTSAVQPSMNLAQSSAVLLYLCHRQGLT-----PTAAVEEAPGAKLGT 179

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           L      +   +L   F+    P  V+N+L +   RAR   +E  +       +E+    
Sbjct: 180 LGALAKRMRDVMLRAEFLNPQAPQHVLNELEQTLMRARLTQREAELWLTAFKHLERAVTR 239


>UniRef50_UPI000038E490 rRNA methylase n=1 Tax=Ferroplasma acidarmanus fer1
           RepID=UPI000038E490
          Length = 236

 Score =  189 bits (481), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   G+++L +V      +++AI  +     ++ NA I +
Sbjct: 8   ISVVLVEPKYQGNIGAVARSMANSGISDLRIVKT--PIETEAIYRSMHGRYILDNAKIFN 65

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGLTNE 123
           +L EA++G  ++ GTS  S++       P                VALVFGRE  GL  E
Sbjct: 66  SLKEAVSGFEIIAGTSDISKSGEKFRRVPTGPEEFWSTNGLTGQKVALVFGREDNGLNYE 125

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL  C++ + I  NPEY   NL+ AV +I YE+  A  +                  D +
Sbjct: 126 ELGMCNFFLKIIGNPEYPVYNLSHAVAIILYEMIKANYSGNATITH------DLIGRDKI 179

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           +   G LE+ L    +  E     +MN L R+  RA     E   + GI+  
Sbjct: 180 DTLAGRLEELLAKIDY-NEQEIDTLMNMLNRIIARANITDSEFFKIMGIMRQ 230


>UniRef50_Q9HJF9 Putative uncharacterized protein Ta1010 n=3 Tax=Thermoplasma
           RepID=Q9HJF9_THEAC
          Length = 291

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 16/245 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
           +N+ IVLV   + GN+G+VAR+M   GL +L ++     PD +A A + G   ++ NA I
Sbjct: 49  ENVYIVLVYPKYQGNIGAVARSMWNSGLRHLIIIGNR--PDDEAFARSMGGRFILENAEI 106

Query: 63  VDTLDEALAGCSLVVGTSAR----SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            D     ++  +++  TS+      +      L P +   +         +ALVFGRE  
Sbjct: 107 YDDFASVISRFNVIAATSSTASSNEKHFRRLPLTPEKFWEEM--SDQGGKIALVFGREDD 164

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GL NEE++KC+Y + I  NPEY   NL+ AV +I Y V        EN E    E    P
Sbjct: 165 GLRNEEIEKCNYFINIPGNPEYPVYNLSHAVAIILY-VMFTRFNPPENIEIRAIE----P 219

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             +DL     ++ + +  T +  E+        LRRL  R+R   +E   + G++  +++
Sbjct: 220 DHEDL--MLRNIIEVMRLTSY-PEHKIRNTELLLRRLIARSRMSDREYFRMMGVIRRVKE 276

Query: 239 QNKGN 243
             +  
Sbjct: 277 SLQRP 281


>UniRef50_A1RXM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermofilum
           pendens Hrk 5 RepID=A1RXM1_THEPD
          Length = 257

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 10/246 (4%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           + + + +  VE  +  N+G +AR+MK   L  L+LV P      ++   A  A+D++ NA
Sbjct: 12  LAKEVSVAFVEPLYEQNIGYIARSMKNFCLAKLYLVKPRCSVGLESRRYAMHAADIVENA 71

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            IV +L E +    LV  T+      P              AE+  + + +V GRE  GL
Sbjct: 72  VIVGSLGELVGMHDLVACTTGVKGKPPLRRYVSPGEMASLFAESTGSKL-VVIGREDWGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           + EEL  C   V I ANPEY SLN + A  ++ YE+   + + Q++ E+           
Sbjct: 131 SAEELSICDMLVTIEANPEYPSLNASHAAAIVFYELFNKYHSVQQSLERPP--------R 182

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           +++E F  HL       G+  E    +++  ++RL    R    +L IL G++    +  
Sbjct: 183 EEVEAFLKHLGDLTTLLGY-DETRSERLLLSIKRLLAETRFSKTDLRILFGLVRDSLETI 241

Query: 241 KGNKAE 246
           K    E
Sbjct: 242 KRTHRE 247


>UniRef50_A7I6L8 RNA methyltransferase, TrmH family, group 1 n=5
           Tax=Methanomicrobiales RepID=A7I6L8_METB6
          Length = 261

 Score =  186 bits (473), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           +  I IVLV   + GN+G  AR MK  G T L LV+P      +A   A+ A DV+GNA 
Sbjct: 1   MPEIDIVLVAPLYEGNVGFAARVMKNFGFTRLVLVDPC-PLGEEAKGRASHAQDVLGNAE 59

Query: 62  IVDTLDEALAGCSLVVGTSARSRT-----LPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           I  T+++  A  S+VV T+ +        +  P   PRE   +         V+++FGRE
Sbjct: 60  IC-TIEDVFARSSIVVATTGQVSKSVCNPMRMPFYSPRELRERIGIA--EGRVSILFGRE 116

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL N+E+++      I  + EY  +NL+ AV ++ YE+             +      
Sbjct: 117 NWGLNNDEVKRSDMICTIPTSDEYPIMNLSHAVGIVCYEL-----------ANLPSAPYR 165

Query: 177 YPLVDDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILAS 235
                ++   Y H+++ L +             M  +RR+  RA   S+E + + G+L  
Sbjct: 166 LATPYEMGHLYRHIDRFLDSVH--HPAFKRENTMIMIRRILGRACLTSREASTVHGLLRR 223

Query: 236 IEQQN 240
            E   
Sbjct: 224 TEWHV 228


>UniRef50_B8D6J8 SpoU rRNA methylase n=1 Tax=Desulfurococcus kamchatkensis 1221n
           RepID=B8D6J8_DESK1
          Length = 234

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 14/243 (5%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +RIVLV      N+G +AR      +  L++V P+     +A+  AA   D +  A + D
Sbjct: 2   LRIVLVGIEGPVNLGVIARTCVNFNVDELYIVKPVASI-EEALNYAARGKDFLLKARVTD 60

Query: 65  TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +LDEA+ G  +V  TS        +    +D      K         VA++FGRE  GLT
Sbjct: 61  SLDEAIKGVDMVAATSDEGYSAGDMLRQAVDLNGFAEKIF--PRTRSVAILFGRESTGLT 118

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            EE+ K    V I ANP Y +LN++ AV ++ +E+      T  N         P    +
Sbjct: 119 REEISKADVLVTIPANPSYPALNISQAVAIVLWELWKQRSITATNIP-------PLASKE 171

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
            L +    L   +       E    +     RR+  +A    +E  +LR  L  + +   
Sbjct: 172 TLRQLLD-LTVEISKLVMTTEEKITRSRILWRRILGKALLTEKEAALLRYWLQRVRRHIS 230

Query: 242 GNK 244
            NK
Sbjct: 231 SNK 233


>UniRef50_C9XV28 Uncharacterized tRNA/rRNA methyltransferase lasT n=30
           Tax=Enterobacteriaceae RepID=C9XV28_CROTZ
          Length = 239

 Score =  184 bits (468), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 102/241 (42%), Gaps = 16/241 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + I+LV  +   N+G+ ARAMKTMG T L +V      D  A  +A GA D++ N  
Sbjct: 11  LMRLPIILVSPARPENVGAAARAMKTMGFTELRIVESAAHLDPAARRVAHGAGDILDNTK 70

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV-ALVFGRERVGL 120
             DTL  AL      V T+ARSR        P++       +AA  PV ALVFGRE  GL
Sbjct: 71  RYDTLAAALEDVDFTVATTARSRAKFHYYATPQQLLPLLEEKAAWLPVTALVFGREDSGL 130

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL        +    +Y SLNL  AV V  Y++      T            P    
Sbjct: 131 TNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLTALMQNTPTAA--------PQADQ 182

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQ 239
             L+     ++  L   G   +      +        R    E ++  +L  +L  IE++
Sbjct: 183 QQLKALRLRIDALLTTLGVEDDLKMADWLQ------QRLGLLEQRDTAMLHRLLHDIEKK 236

Query: 240 N 240
            
Sbjct: 237 V 237


>UniRef50_Q1QMV4 RNA methyltransferase TrmH, group 1 n=14 Tax=Bradyrhizobiaceae
           RepID=Q1QMV4_NITHX
          Length = 410

 Score =  184 bits (468), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 5/241 (2%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++LVE     N+G  ARAM    LT L +VNP    P+  A   AAGA  ++ +  + D
Sbjct: 17  TVILVEPQLGENIGMAARAMGNFALTRLRIVNPRDGWPNVAAQRAAAGADHILKHVELFD 76

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSV-AEAANTPVALVFGRERVGLTNE 123
           T++ A+A C+L++ T+AR+     P++ P     ++    AA   V ++FGRER GL NE
Sbjct: 77  TVEAAVADCTLLLATTARAHDQAKPVVAPEAAAAEATVQIAAGGHVGILFGRERAGLLNE 136

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           E+      +    NP ++SLNLA AV ++ YE     L T+        E +       +
Sbjct: 137 EVAMADRIITYPVNPGFASLNLAQAVLLMGYEWFK--LVTRAALPFAMPERSERASQHQM 194

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMN-KLRRLFTRARPESQELNILRGILASIEQQNKG 242
           + F+ +L   L    F+R       M   LR +FTR  P  Q+++ L G++ +I +  KG
Sbjct: 195 QAFFDNLVSELDKVEFLRPAEKRDTMLVNLRNIFTRMEPTKQDMHTLHGVVMAIAEGRKG 254

Query: 243 N 243
            
Sbjct: 255 P 255


>UniRef50_A3DMM1 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DMM1_STAMF
          Length = 231

 Score =  184 bits (467), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 14/240 (5%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +R+VLV    + N+G +AR     G+  L+LV P      +A+  AA ASD +  A IVD
Sbjct: 3   VRVVLVGIEGSVNLGFIARTCVNFGVDELYLVKPAADL-EEALRYAAKASDYLKKAIIVD 61

Query: 65  TLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
            L +A+    LVV T+A+      +    +  R+             +A++FGRE  GLT
Sbjct: 62  DLVDAIKDVDLVVATTAKGYSVGDVVRQAVPLRDFVEMVKGRV--NRLAILFGRESTGLT 119

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            +EL+     V I ANPEY  LNL+ AV V  +E+        EN         P    D
Sbjct: 120 RKELRYADVLVTIPANPEYPVLNLSQAVAVFLWEIWNIRGVRAENIP-------PSAGRD 172

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
           ++E F   L   +     +++    ++M   +++  R+R    E  +L   L  +  + +
Sbjct: 173 EIE-FILKLIHDISKKVLVKDEKVSRIMEIWKKIIYRSRISKYEARLLTYWLRKVLGKLE 231


>UniRef50_Q6L288 RRNA methylase n=1 Tax=Picrophilus torridus RepID=Q6L288_PICTO
          Length = 235

 Score =  183 bits (466), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 10/228 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I +VLVE  + GN+G+VAR+M   GLT+L +V      D  A   A     ++ NA I +
Sbjct: 7   ISVVLVEPKYQGNIGAVARSMANSGLTDLRIVKT--PIDEDARRRAMHGLYILDNARIYN 64

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTNE 123
           + D+A++G  ++ GTS  S++       P            N   VALVFGRE  GL N 
Sbjct: 65  SFDDAVSGFDIIAGTSDVSKSGNKFSRVPVSPEYFWDNYGLNGKRVALVFGREDNGLNNY 124

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           EL KC++ + I  NPEY   NL+ AV +I YE+     +          E   Y   +  
Sbjct: 125 ELSKCNFFIKIIGNPEYPVYNLSHAVAIILYEMIKRVYSGNI------IESNNYISPEHF 178

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                  E+ L   G+ +     ++    RR+  R+     E   + G
Sbjct: 179 NIMINRFEELLNLLGYEKP-KVDKLSVMARRIAARSNITDAEYFKIMG 225


>UniRef50_A2BNA8 rRNA methylase n=1 Tax=Hyperthermus butylicus DSM 5456
           RepID=A2BNA8_HYPBU
          Length = 239

 Score =  182 bits (464), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 16/243 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
             +R+V+V      N+G +AR      +   +LV+P+  P  S+A   AA    ++    
Sbjct: 7   PRVRLVVVGVEGEINLGFIARLAANFAIDEFYLVSPVASPESSEARRFAANGVYMLDRVI 66

Query: 62  IVDTLDEALAGCSLVVGTSARSR---TLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +VD+L+EAL G  L V TSA+      +    + PRE   +         VA+VFGRE V
Sbjct: 67  VVDSLEEALKGVDLAVCTSAKIGQASDVLRHAVTPREFAEEI--APRYESVAVVFGRESV 124

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           GLT +EL KCH  V I ANP Y  LNL+ AV ++ YE+       ++  E          
Sbjct: 125 GLTRDELAKCHLLVHIPANPNYPVLNLSHAVAILLYELYNTRRGEKQLHE--------PA 176

Query: 179 LVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             + LER Y HL         +      QV   L+ +  R      E ++L      + +
Sbjct: 177 RGETLERIYEHLSWLAEKL--VDRERVSQVKAALKHILWRCSITGGEASMLYYFAKKLRK 234

Query: 239 QNK 241
           + +
Sbjct: 235 RLE 237


>UniRef50_C0Q8Q0 TrmH1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q8Q0_DESAH
          Length = 226

 Score =  182 bits (464), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 3/220 (1%)

Query: 27  TMGLTNLWLVNPLVKPDSQAIALAAG-ASDVIGNAHIVDTLDEALAGCSLVVGTSARSRT 85
            MGL  L +V P     ++A   A   A+ ++    I  TL +ALA    VVGT+AR   
Sbjct: 2   NMGLDQLVVVAPDDFDRTRAEKTATHSAASILDRMEICSTLSQALAPFEYVVGTTARLGG 61

Query: 86  LPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNL 145
               +  PR   L+      N  VAL+FG E  GLTN E+  CH  + I     +SSLNL
Sbjct: 62  QRL-VESPRTVALRVATLCENNRVALLFGPEDRGLTNGEICFCHALINIPTLG-FSSLNL 119

Query: 146 AMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHP 205
           A AV ++ YE+ +A    Q    + +        V +LE  Y  L   L   G++   +P
Sbjct: 120 AQAVVIVCYELLVAVEHQQGLPLEKKQVVPRLATVSELEIMYQRLSLVLAEIGYVNPENP 179

Query: 206 GQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA 245
              +N++R+  +R + ++ E  I++G++  I    +    
Sbjct: 180 DFWLNRVRQFLSRIKIQAGETGIVKGVIDRIVAYGESRYQ 219


>UniRef50_O28473 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus
           RepID=O28473_ARCFU
          Length = 226

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 13/234 (5%)

Query: 9   LVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDE 68
           LVE     N+G +AR  K  G+  L L    V    ++   AA A DV+ NA +V+ L E
Sbjct: 2   LVELKIPENVGFIARVAKNYGIKRLCLYKCRV--TEESYHTAANAKDVLENAVVVEDLQE 59

Query: 69  ALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKC 128
            L   +L+VGT+          L       + +   A   VA++FGRE  GL NEEL+ C
Sbjct: 60  FLQRMNLIVGTTGIPGGDYK-YLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMC 118

Query: 129 HYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYG 188
           H  V +  + EY  +N++ A  VI Y +R               E+       D+E    
Sbjct: 119 HVLVRVPTSEEYPVMNVSHAAAVILYFLREIER---------VQEDDEIATFRDIEVTLS 169

Query: 189 HLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
           +L + L    +  E+   + +   RR+  RA  +  E++ L  I        K 
Sbjct: 170 NLVEMLRMVQY-PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKR 222


>UniRef50_B0EAZ5 Nucleolar phosphoprotein, putative n=2 Tax=Entamoeba
           RepID=B0EAZ5_ENTDI
          Length = 350

 Score =  176 bits (448), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 11/239 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            I +VLV   H  N+G+V R     G+  L++VNPL K   ++I ++   +  I  A I 
Sbjct: 96  KISVVLVRPMHEDNIGAVGRLCANYGINKLYIVNPLCKIGEESIKVSRHGNGYIEGAVIC 155

Query: 64  DTLDEALAGCSLVVGTSARS---RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           ++L+E    C+L+VG +AR    +     ++  +E G           + LVFG E  GL
Sbjct: 156 NSLEEVRKDCTLLVGYTARESSGQKNKRILMTMQEAGDMLST--MKGCLGLVFGNESNGL 213

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
             EE   C     I     Y  LNL+ AV +    + M       +G  +  E     + 
Sbjct: 214 NTEECDACDLLNKIDIRSHYPVLNLSHAVGIALNYMHMRLR----DGGDLVPEGCKENIA 269

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            +        ++ L +   + E      +  +++L  R     +E   L G   ++   
Sbjct: 270 KEKGELLEQWKEILHSV--MNEQREIGAVESMKKLLGRVMLTEREAAALDGAFKALLHH 326


>UniRef50_B0VIE5 Putative tRNA/rRNA methyltransferase (YfhQ) n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIE5_9BACT
          Length = 278

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 7/234 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
              I ++LVE  + GN+G++AR M     ++L +V  + + +     LA  + +++ N +
Sbjct: 7   FSRIAVILVEPIYGGNVGAIARIMHNFCFSDLRIVGKVPEKND--FYLAMHSEEILENVN 64

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           I  TL++A+ G   V+  S R          P +   K V    ++ + LVFGRE  GLT
Sbjct: 65  IYSTLEDAINGLDRVIAFSRRLGKNKPVDFTPGQMA-KYVHSLPDSNIGLVFGRETYGLT 123

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           + E + C       ANP + SLNLA AV +  +E+       ++ G++            
Sbjct: 124 DSEAELCPLRCHFMANPSFPSLNLAQAVALALWEIYSLPWEEKQKGKKYY----NSASGK 179

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           +L+    ++ + +   GF +          L ++  +  P+   L  LR +   
Sbjct: 180 ELDEIRNYILEVMRQCGFFQRRETINWDTFLAKMLAQLNPDKNMLYRLRQMFNR 233


>UniRef50_C1SGQ3 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SGQ3_9BACT
          Length = 240

 Score =  172 bits (436), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ + ++L       N+G +ARAM   G ++L     +      A+  A  ASD++ NA+
Sbjct: 1   MKGVNVLLSRLEGPVNLGFIARAMANTGFSSLSYTGTVPYNHEDALKFAVHASDILENAY 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
             +T +E ++   +V+G + RS      +         S   +    V L+FG E  GL 
Sbjct: 61  HPETFEELISTSDVVIGFTPRSPFSTNNLPYEELKDFVSETVSTGLKVGLLFGNEASGLN 120

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
           N+EL  C + V++  + +Y S+NLA AV V  ++++        + E  +  E  Y   +
Sbjct: 121 NKELSACAHRVSLPTSADYISMNLAQAVLVSLWQIK--------DIEPDKEAEAEYADRN 172

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGIL-ASIEQQ 239
            +      ++  L    +  + +P  +  ++R++    R   +E  ++  +   SI + 
Sbjct: 173 TIGTLLQRIKDHLELIEYFNDQNPDHIWKEIRQMIESKRLTKREAELMLSVFGKSISRY 231


>UniRef50_Q67P01 tRNA/rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum
           RepID=Q67P01_SYMTH
          Length = 257

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 10/251 (3%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L  + +VL +     N+ ++ R M   GL++L LV P      +   +A     +I    
Sbjct: 8   LDRVALVLYQPQDVVNVAAIIRVMSNFGLSDLRLVEPAAFDPHRIAGIAHHTEPLIARTR 67

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              TL+ ALA C L +GT+ R R     +L PR      + +A    VA++FG ER GL 
Sbjct: 68  RFPTLEAALADCGLTLGTTGRPRETERQVLPPRAAAPMILDQARTQRVAILFGPERDGLP 127

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP----- 176
           N  L  CH  + I  +P   SLNLA A  VIAYE+ MAW    +                
Sbjct: 128 NAALDLCHGVITIPTHPFNRSLNLAQAALVIAYELWMAWTQPNDGPAHRPPAAAAPPDAT 187

Query: 177 --YPLVDDLERFYGHLEQTLLATGFI--RENHPGQVMNKLRRLFTRARPESQELNILRGI 232
                  + E  +  +++ L A  +             +LR L  RA+P  +E   L  +
Sbjct: 188 ESLATGAEREALFAAVDELLSAL-YPGGSPGRRSSAAARLRALLLRAQPRREEARALTNL 246

Query: 233 LASIEQQNKGN 243
           L    +  + +
Sbjct: 247 LRHAARTGRRS 257


>UniRef50_Q1D9N7 RNA methyltransferase, TrmH family n=6 Tax=Cystobacterineae
           RepID=Q1D9N7_MYXXD
          Length = 240

 Score =  170 bits (432), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 9/242 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           M+  +R VL+   +  N+G+ ARA+K  GL++   V P V+    A  LA  A DV+  A
Sbjct: 1   MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAGDVLDAA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              DTL+EA+A C  VVGTS+R +      L PR  G + VA A   PVALVFG ER GL
Sbjct: 61  RRADTLEEAVADCVWVVGTSSR-KVEGKRRLPPRAVGEELVARAPQGPVALVFGDERSGL 119

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TN E+++ H   A+   PE  S+NLA AV + AYEVR+A L                   
Sbjct: 120 TNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAMLEAAATPPGPLPA---AATD 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFT---RARPESQELNILRGILASIE 237
            +L +    LE  L   GF+ +  PG+    +R LF    R+R   +E  +    L S+ 
Sbjct: 177 AELAQVESTLESVLTTGGFLVDAQPGRT--AVRDLFAPLRRSRLTRKEARLWLAALHSLR 234

Query: 238 QQ 239
           ++
Sbjct: 235 KR 236


>UniRef50_D2PC46 RNA methyltransferase, TrmH family, group 1 n=12 Tax=Sulfolobaceae
           RepID=D2PC46_SULIS
          Length = 237

 Score =  170 bits (431), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 16/236 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IR+VLVE     N+G VAR  +   +  L++VNP     S+A   +AG  + +  A IV+
Sbjct: 2   IRVVLVEPEGEYNIGFVARLCRNFSVDELYIVNPRANV-SEAFKFSAGGKEFLEKAKIVN 60

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
             DEA+    + + TS+ +      +L       + ++      VALVFGRE VGLT EE
Sbjct: 61  NFDEAINDVDIKIATSSIADNNG-DILRKSIRPWELLSLIQGKKVALVFGRESVGLTREE 119

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET--------- 175
           + KC + + I ANP Y  LNL+ AV ++ YE+                +++         
Sbjct: 120 IFKCDFLLYIPANPSYPVLNLSHAVGIVLYEIWKNRELLNNPQTSTISDQSIKLIDRYAE 179

Query: 176 ----PYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELN 227
                    DD  + Y  L++T++  G   E     +++ LR+L+TR     +E+N
Sbjct: 180 ILYKMLKRSDDDYKMYIALKRTIIK-GVKDEEEARVIVHFLRKLYTRIIHNEKEMN 234


>UniRef50_B9LNN3 RNA methyltransferase, TrmH family, group 1 n=10
           Tax=Halobacteriaceae RepID=B9LNN3_HALLT
          Length = 290

 Score =  169 bits (430), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 16/237 (6%)

Query: 15  TGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGAS-DVIGNAHIVDTLDEALAG 72
            GN+G++ARAMK  GL++L LV+P   K D +A   A  A  DV+ NA  V T DE +A 
Sbjct: 49  PGNVGTIARAMKNFGLSDLKLVDPPELKEDGEAYGFAGHAREDVLPNADEV-TFDEIVAN 107

Query: 73  CSLVVGTSARSR-----TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
               VGT+A +         +P   P E         A  P A+VFGRE  GL NEEL +
Sbjct: 108 -YHTVGTTAITGEDDQSHERFPFKTPVELRESLKTVDA--PTAIVFGREGRGLNNEELSQ 164

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFY 187
                +I A+ +Y  LNL  A  V+ YE+R   +   +  +             D+ERF+
Sbjct: 165 LDEVCSIPADDDYPVLNLGQAATVLLYELRDLTVDETQLPDTAVTRAPEP----DVERFH 220

Query: 188 GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNK 244
                 L ATG  RE+H  +    +RRL  RA P  +E++ L G       + +   
Sbjct: 221 EFFGDFLEATG-QREHHRDKNALLVRRLLGRAHPTEREIHSLLGTFRKANVKLEHAD 276


>UniRef50_A0KMM3 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Aeromonas
           RepID=A0KMM3_AERHH
          Length = 230

 Score =  169 bits (429), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 14/240 (5%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLV  +   N+G+ ARAMKTMG   + LV   V  + +A  +A GA +V+  A   
Sbjct: 2   KLYFVLVAPARPANVGAAARAMKTMGFDAMRLVASRVHEEEEASWVAHGAQEVLTQAEAF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           DTL+EALA   LVV T+AR R      L P E   +  A+ +   VA+VFG E  GL+NE
Sbjct: 62  DTLEEALADMDLVVATTARQRGRYQHYLTPAEIRDQIKAKPSLDKVAIVFGCEESGLSNE 121

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +L +      +     Y SLNL  A+ + AYE+       +   E V+           +
Sbjct: 122 QLAQVDLISYLPLKVSYPSLNLGQAIMLYAYELSQLLDEPEVLAENVD-------NAGQV 174

Query: 184 ERFYGHLEQTLLATGFIRENHPGQV-MNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
                   + L   G  ++    Q  M+++           ++LN+L  +   + ++   
Sbjct: 175 RVLKSKTAEILGDLGVSQDEKLHQWVMDRV------PMLPQRDLNMLHLLCKDLARKLGK 228


>UniRef50_P37005 Uncharacterized tRNA/rRNA methyltransferase lasT n=97
           Tax=Enterobacteriaceae RepID=LAST_ECOLI
          Length = 228

 Score =  169 bits (429), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            I I+LV  +   N+G+ ARAMKTMG ++L +V+     +     +A G+ D+I N  + 
Sbjct: 2   RITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVFGRERVGLTN 122
            TL E+L      V T+ARSR        P E       + +  +  ALVFGRE  GLTN
Sbjct: 62  PTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           EEL        +    +Y SLNL  AV V  Y++        ++                
Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDAT--------ADQHQ 173

Query: 183 LERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRAR-PESQELNILRGILASIEQQN 240
           L+         L       +      +        R    E ++  +L  +L  IE+  
Sbjct: 174 LQALRERAMTLLTTLAVADDIKLVDWLQ------QRLGLLEQRDTAMLHRLLHDIEKNI 226


>UniRef50_B2KEG9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KEG9_ELUMP
          Length = 225

 Score =  168 bits (427), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 11/234 (4%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           I I+LV+  +  N+G+ ARAM   GL++L +      P+ +    A GA D++  A I D
Sbjct: 2   ITIILVKPRNPNNIGASARAMANFGLSDLRIAG-AHIPNLEEAQAAVGAEDLLKKAKIFD 60

Query: 65  TLDEALAGCSLVVG-TSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
            L +ALA C+     TS ++R     ++                 +A+VFG E+ GL+ +
Sbjct: 61  NLQDALADCNFAFAATSLKNRNTQKEIVSLP----NINNHIKRGKIAVVFGSEKTGLSVK 116

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDL 183
           +++ C   + I    +  S+NLA AV ++ YE         +N + ++ ++T  P   D+
Sbjct: 117 DIELCDAVLNIPTTTKQPSVNLAQAVNLVCYETAK-----TKNFKTLKQQKTNLPSFKDI 171

Query: 184 ERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
           +     + +      F +E         ++ +   +    ++L I++  L  ++
Sbjct: 172 DLLTADILELFDRKEFKKELTKTDRELLIKNILKSSSLSKKQLFIIKKFLNLLK 225


>UniRef50_B4UHH1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter
           RepID=B4UHH1_ANASK
          Length = 269

 Score =  167 bits (424), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 20/257 (7%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-----------------LVKPDSQA 46
            IR+VL       N+G+ AR MK  GL+ L +V P                      ++A
Sbjct: 5   KIRLVLHRPQSADNVGAAARVMKNFGLSRLVVVAPAAWGGPPRTPGTGAITARDDVLARA 64

Query: 47  IALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN 106
             +A  ASD++  A I   L  A+   + V GT++R+     P L+PR    + V  +A+
Sbjct: 65  RRMARKASDLLDGAEIHPDLRSAIGPATWVCGTTSRA-VEGRPWLEPRGLAAELVRRSAD 123

Query: 107 TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
             VA+VFG ER GL++ EL+ C     I     Y S+NLA AV V+AYEV  A       
Sbjct: 124 GEVAVVFGEERRGLSDAELELCQAVCTIPTAAAYDSMNLAQAVAVVAYEVARAAPPPGAA 183

Query: 167 GEQVEHEETP--YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQ 224
             +            ++ +E  +   +  L A G++   +P  ++   RRL  RA P  +
Sbjct: 184 PAEAPPGRGGDAPARIETVEALWARAQAVLGAAGYLNPQNPEHILADFRRLLARADPTQR 243

Query: 225 ELNILRGILASIEQQNK 241
           E+ +L G L S+++  +
Sbjct: 244 EVELLLGALRSLDRVLR 260


>UniRef50_B3T9Y7 Putative SpoU rRNA methylase family protein n=1 Tax=uncultured
           marine microorganism HF4000_APKG7N23 RepID=B3T9Y7_9ZZZZ
          Length = 209

 Score =  167 bits (423), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 10/218 (4%)

Query: 25  MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSA-RS 83
           M   G+ +L LV    + D    A +     ++ N    DTL+EALA C + + TS  + 
Sbjct: 1   MVNFGIDDLALVKGC-EIDDDGYARSKSGKPILENLSRFDTLEEALADCDVAIATSGIKP 59

Query: 84  RTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSL 143
                    P+               AL+FGRE  GL   EL  C   + I  NP++  L
Sbjct: 60  EGDKRWFRAPKSIKELPDLIKEREKPALIFGRENYGLYRGELALCEVTITIPTNPKFPIL 119

Query: 144 NLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIREN 203
           NL+ AV ++ YE+         +G     ++      ++ ER    +   L  T + R  
Sbjct: 120 NLSHAVGIVLYEIYR-------DGNHKNPKKRKAVSNEEFERLVDRIMDLLEETSYPR-R 171

Query: 204 HPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNK 241
              +    LRRL +R  P+  E   L GI  +I++  +
Sbjct: 172 RLDRSRTTLRRLISRGNPDEGEYENLMGIFKAIKEGKR 209


>UniRef50_Q4FSH9 Possible rRNA methyltransferase SpoU family protein n=4
           Tax=Moraxellaceae RepID=Q4FSH9_PSYA2
          Length = 298

 Score =  166 bits (421), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 82/276 (29%), Positives = 130/276 (47%), Gaps = 41/276 (14%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           L +I++V+V T+   N+GS ARAM TMGL+ L +V P +  D+ +++ AAG SD++ +A 
Sbjct: 24  LSSIQVVMVNTTLPANIGSAARAMHTMGLSRLTVVEPKLPIDATSVSHAAGGSDLLSSAI 83

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-------------P 108
           I  TL+ A+A C LV   S+RSR LP P++ P +     +                    
Sbjct: 84  IAPTLEAAIADCQLVFAASSRSRHLPRPVVTPTQAAKIMLDFIDKQSAINERNDVNTAPN 143

Query: 109 VALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
           +A++FGRE  GLTNEEL    YH+ I ANP Y  LN+A AVQVIA  +     A      
Sbjct: 144 IAILFGREDRGLTNEELAYADYHIQIDANPAYPVLNVASAVQVIASFIF--AYAQTHIKA 201

Query: 169 QVEHEETPYPLVDDLERF---------YGHLEQ-----------------TLLATGFIRE 202
             E    P  + D LE               ++                  ++       
Sbjct: 202 NSEANNNPLEVTDSLETLGQPMLNTYTRQQWDEPAITQQQLQQLTERTTALMVQHKLADS 261

Query: 203 NHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
            +   + ++L RL +R + + +E  ++  ++A + +
Sbjct: 262 ENLKSLPSRLSRLGSRIQLDQKEYQLISALIAKLAK 297


>UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI.
           Incertae Sedis RepID=C2HJX9_PEPMA
          Length = 244

 Score =  162 bits (412), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 17/164 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
               I+L E +   N+GS+ R  +  G   + +      + ++ AI  +AGA   I  A 
Sbjct: 93  DPFLIILDEITDPHNLGSIIRTAEVAGCHGVIIPKHRACEVNATAIKTSAGAVFNIKIAR 152

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T++        + G                E            P+ LV G E  
Sbjct: 153 VTNITTTINYLKEHNIWIYGACG-------------EASQTHTQANLKGPIGLVIGNEGK 199

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           G++    + C   + I    +  SLN + A  ++ YE+      
Sbjct: 200 GISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQRYE 243


>UniRef50_C9RQC6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RQC6_FIBSS
          Length = 269

 Score =  162 bits (410), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 13/240 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNA 60
           ++  R+VLVE  H  N+G VARAM    L  L++V P   K   ++   AA + D++ NA
Sbjct: 1   MRKFRVVLVEPEHPHNVGFVARAMHCYALPELYIVYPKRDKVLDKSYHTAANSHDILDNA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            +V   ++A+  CS  V   A SR +    +        S     +  +ALVFGRE  GL
Sbjct: 61  KVVHKFEDAIGDCSCAV---AYSRRIFASSIKHTMVQNLSDMLPEDGTIALVFGRESCGL 117

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM----AWLATQENGEQVEHEETP 176
             EE+  C Y   I       SLNL  AV +  YE+      A    +         ET 
Sbjct: 118 ALEEVNACTYQCEIPVPGLM-SLNLGQAVSISLYELCRSGALANGEGRAKRTTRGVAETG 176

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
              +  ++ F   L++ L      + +      + L  L  R  P   EL+ L G+L ++
Sbjct: 177 PATIQQIDGFKKFLDRYLTG----QYHDQAWRDSFLNTLLQRLHPTRNELSALFGLLRNL 232


>UniRef50_C5BT47 Putative tRNA/rRNA methyltransferase LasT n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BT47_TERTT
          Length = 233

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 17/233 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           +  +LV  +   N+G+ ARAMKTMG   L LV   +  D +A  +A GA D++ +A    
Sbjct: 2   LSFILVNPARPANVGAAARAMKTMGFKQLILVGSDIHLDEEAHWVAHGAQDILTSATCYP 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L        L++GT+AR R      L P E   +   +  +    LVFG E  GL+N++
Sbjct: 62  DLASLKPDFDLLIGTTARERGSARRYLSPPELNSQLSQQ--SGRSGLVFGCEASGLSNDQ 119

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLE 184
           L  C  +  I     Y SLNL  AV V +Y +                 E   P    ++
Sbjct: 120 LALCDLYSYIPLATPYPSLNLGQAVMVYSYALSQLKSRIGL--------EDEAPDARQIQ 171

Query: 185 RFYGHLEQTLL-ATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
                  + L   T    E     +M  L      AR   ++L +   ++  +
Sbjct: 172 HLKNRAAEFLAPHTDSKTEKLSEWLMESL------ARLSDRDLRMAHQLINLL 218


>UniRef50_Q0VNS2 RNA methyltransferase, TrmH family, group 1 n=2 Tax=Alcanivorax
           RepID=Q0VNS2_ALCBS
          Length = 223

 Score =  161 bits (408), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 4/217 (1%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +I  +LVE +   N+G+ ARA+KTMG + L LVNP     + A  +A  ++DV+  A IV
Sbjct: 2   DIVFILVEPARGENIGAAARAIKTMGFSQLRLVNPGD--MTAAHWVAHHSNDVLEQAMIV 59

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTN 122
           D+L +AL    L +G +AR R      +D   C      +  +   VA+VFGRE  GLT 
Sbjct: 60  DSLAQALVDVDLSIGCTARHRLQKDRYVDADHCAALVAGKGNSVQRVAIVFGREASGLTG 119

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           +EL  C    +I    +  SLNLA AV + A+E+R          +      T   +   
Sbjct: 120 DELGLCDLASSIPLAQQQPSLNLAQAVMIYAWELRKQPAVKITEPDPATFSHTRQAVHQQ 179

Query: 183 LERFYGHLEQTLLA-TGFIRENHPGQVMNKLRRLFTR 218
           L   +    + L      +      + +  +R+L  R
Sbjct: 180 LASLHIQPNENLHQWVDELLPLANDRELGLVRQLLRR 216


>UniRef50_Q74MD8 NEQ384 n=1 Tax=Nanoarchaeum equitans RepID=Q74MD8_NANEQ
          Length = 232

 Score =  160 bits (405), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 13/241 (5%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA--H 61
            + +  VE     N+G++AR  K      L+L+NP V    +A  +A  A D++  A  +
Sbjct: 2   RVIVFFVEPEKVDNIGAMARVCKNFNAD-LYLINPKVDNYEKAFVVAKHAQDLLQKAIEN 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
            ++++DEA     + VGT+ +       +  P +    +   A +   + +  GRE +GL
Sbjct: 61  KLNSIDEAKELVDISVGTTGKIANEYNVLRSPLKPWELAERFANSDIKLGIFIGRESIGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEEL K  + V I AN EY  LN   A  +I YE+         N           P  
Sbjct: 121 TNEELSKMDFIVTIPANKEYPILNATHATAIILYELFKHSKEGHVNLA--------LPKK 172

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
           + ++    ++++ +                 +R+L T+    S+E N L G   SI +  
Sbjct: 173 EQIDVLLDYVKKIIDKLPQPDY-RKEYYFIIMRKLITQGIINSREANTLIGFFRSIYENL 231

Query: 241 K 241
           K
Sbjct: 232 K 232


>UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH
          Length = 244

 Score =  160 bits (405), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
               I+L +     N+G++ R     G   L                 +AGA + +  A 
Sbjct: 93  DPFIIILDQVQDPHNLGAIIRTAYAAGAHGLIYPRKRSADITPVVTKASAGAVNHLPLAK 152

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+ +       + GT  R                   +     PV LV G E  
Sbjct: 153 VSNINYTIADLKDMGLWITGTDVR-------------GTRPYYSADYKGPVGLVIGNEGK 199

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           G+     + C + V I  + E  SLN ++A  V+ +EV     +T
Sbjct: 200 GMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRST 244


>UniRef50_Q73KY3 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola
           RepID=Q73KY3_TREDE
          Length = 251

 Score =  159 bits (404), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 13/244 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV- 63
            I+L     + N+G+V R M   G ++L +       D  + + LA  AS V   A    
Sbjct: 6   TIILCRPETSANIGAVCRVMANTGFSDLRITGTKEDYDETEVLKLALHASHVWKKARFYP 65

Query: 64  ---DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              + L EA + CS+++GTS R+      +    E     + +     + LVFG ER GL
Sbjct: 66  PTIEGLKEAASDCSVLIGTSRRTGHKRKDLGMSPEDLCLDLKKFYGGRLGLVFGNERTGL 125

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            +EEL  C + V I A  ++ S NL+ AV ++ Y + +A        +     E    L 
Sbjct: 126 IDEELNICSFSVNIPAEEDFGSYNLSHAVLILCYSLYIAEKNNPLTEKDNPSIEKNIYLQ 185

Query: 181 DDLERFY----GHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASI 236
               +        +   L   G  ++            L + A   + E +I+   L  I
Sbjct: 186 KASMKMIQENSEQICNYLSGLGLFKKGGKKTNETFFIELLSSAG--ASEFDIMH--LTEI 241

Query: 237 EQQN 240
            ++ 
Sbjct: 242 FKKL 245


>UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus
           RepID=Q2JI19_SYNJB
          Length = 378

 Score =  159 bits (403), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 17/174 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61
             + +VL       N+G++AR+++  G+  + +         S  + +AAGA   +  A 
Sbjct: 198 NPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAGVTSTVMKVAAGALSTLPVAR 257

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L+        V GT++R                   +     P+ALV G E  
Sbjct: 258 VVNLNRALEYLKEQGFWVYGTTSR-------------GADPIYSADFQRPIALVVGSEGE 304

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172
           G++    + C   ++I       SLN ++A  +  YE+            +V+ 
Sbjct: 305 GISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRPEVDT 358


>UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes
           RepID=A6LPP3_CLOB8
          Length = 300

 Score =  159 bits (402), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 17/162 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
             ++L E     N+GS+ R  +  G+  + L         +     + GA + +  A + 
Sbjct: 152 FIVILDEVEDPHNLGSIVRTAELFGVHGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVT 211

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T++E       + G   R                 S       P A++ G E  G+
Sbjct: 212 NLNSTIEELKEKGIWIYGADIR-------------AEEYSYQVDFGGPCAVIIGNEGRGI 258

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           +   ++KC   + I    + +SLN ++A  +I YEV    L 
Sbjct: 259 SKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGRLK 300


>UniRef50_A9SV68 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SV68_PHYPA
          Length = 287

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 34/253 (13%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAG--ASDVIGN 59
           L+ +R+VLV   H GN+GSV       G+              +A  +AA   +   + +
Sbjct: 24  LERVRVVLVSPQHAGNVGSVNPQCDFRGV--------------EAQTMAANVTSRSKLEH 69

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
             + DTL EAL  CS+ VG + RS  L  P           +    +  +A+VFGRE  G
Sbjct: 70  IRVTDTLPEALKDCSMAVGFTRRSGILRIPDTRL---ANLCIPPLDSLNLAIVFGREDRG 126

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE--------QVE 171
           LTNEEL  C +  +I +     SLNL+ AV V+   +       Q +             
Sbjct: 127 LTNEELMYCTHVCSIPSIQSAGSLNLSHAVAVVLSRLYEQIPHEQAHDPSNYVPIHSTSF 186

Query: 172 HEETPYPLVDDLERFYGHLEQTLL-------ATGFIRENHPGQVMNKLRRLFTRARPESQ 224
                   ++ +E      E  L        A G        +++  +RR+  R  P  +
Sbjct: 187 KNLPGTASIEAVENLMRRWELVLQACNQATVALGIPNYRMQERMLVHVRRMLLRTGPSLK 246

Query: 225 ELNILRGILASIE 237
           EL  L G L  +E
Sbjct: 247 ELGFLHGFLTMVE 259


>UniRef50_A1U6V8 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Marinobacter
           aquaeolei VT8 RepID=A1U6V8_MARAV
          Length = 226

 Score =  158 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 97/240 (40%), Gaps = 18/240 (7%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
            +  VLVE     N+G+ ARA+ TMG + LWLVN  +    +A  LA G+  ++ NA I 
Sbjct: 2   KLAFVLVEPKVPENVGAAARALCTMGFSELWLVNSDLHTRPEAHWLAHGSDHILDNARIF 61

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV---ALVFGRERVGL 120
             L        L++GTSA+ R       +P    L+SV       V   ALVFGRE  GL
Sbjct: 62  PDLAAVRNSADLLMGTSAKPRHHRQDWHEP--GALRSVLANKGGSVATAALVFGREDRGL 119

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NEEL  C           Y SLNL+ AV + A+E+      +    E            
Sbjct: 120 ANEELALCDLLTGFPMAVSYPSLNLSQAVMLYAWELSGLARQSNSTPE--------VASD 171

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
             L      LE  L A                +RL        +++     +  ++E++ 
Sbjct: 172 ASLGALRQRLETLLPALE--APADSKLSQWVFQRL---PMLSERDVGFAHTLCGNLERKL 226


>UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli
           RepID=TRMHL_STAHJ
          Length = 249

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           ++L       N+GS+ R     G+  + +     V         + GA   +    + + 
Sbjct: 98  VILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNL 157

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T+DE       V G  A             +        AA+ P+A+V G E  G++ 
Sbjct: 158 AKTIDELKEHGYWVAGAEA-------------DNATDYRDMAADMPLAIVIGSEGQGMSR 204

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
               KC +++ I      +SLN ++A  ++ YEV        +N 
Sbjct: 205 LVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQVGDNA 249


>UniRef50_B1L7Q2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Korarchaeum
           cryptofilum OPF8 RepID=B1L7Q2_KORCO
          Length = 246

 Score =  157 bits (398), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 13/247 (5%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           + ++ ++LVE     N+G +ARAMK  G   L +V P+ +   +AIA A  A DVI    
Sbjct: 1   MPDLIVILVEPEKADNVGMIARAMKNFGFYELRVVRPMFESFDRAIAAAMRARDVIERME 60

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           I+ TL+EA  G  L++GT+AR                   + + +    LV GRE +GLT
Sbjct: 61  ILTTLEEARRGVDLMIGTTARVSRYS-VERRAIPIRDLLSSISWDAVYGLVLGRESIGLT 119

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
            EEL  C     I ++ +Y +LN+A A  +I YE  +A+       +     E      +
Sbjct: 120 TEELSYCDIVATIPSSEDYPALNVANAAAIILYEFFLAF-------KDSSRFEVKPVPRE 172

Query: 182 DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRA---RPESQELNILRGILASIEQ 238
             E    ++ + +   G +R+    + +  +RR+  R        +E +   GI+ ++  
Sbjct: 173 AREVMIRYIGEVIDLLGGMRDR--ERFLFTMRRMIERTFPCGISEEEASQALGIIKAVRD 230

Query: 239 QNKGNKA 245
                K 
Sbjct: 231 ALARVKG 237


>UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3
          Length = 384

 Score =  157 bits (397), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63
           + I++   +   N+G++ R  +  G   + L    V    S  + +AAGA +    A +V
Sbjct: 218 VLIIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVV 277

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +    L+        + GT A  +                       P+ LV G E  GL
Sbjct: 278 NLSRALETLKESGFWIYGTVAGKQ-------------TALHQADLREPMGLVIGSEGEGL 324

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
           +    + C + + I    +  SLN ++A  +  YE+       +        +   
Sbjct: 325 SLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQRGFDRPTLSHTASDLRE 380


>UniRef50_Q6MHK3 RNA methyltransferase, TrmH family, group 1 n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MHK3_BDEBA
          Length = 261

 Score =  156 bits (396), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 105/254 (41%), Gaps = 18/254 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVD 64
           IRIVLV T +  N+G+ +RAM  MG+  L L++P  +   +A   AA     + N     
Sbjct: 7   IRIVLVRTIYERNIGATSRAMSNMGIEKLILIDPKCEITYEAQQAAATGQTGLQNRTTYA 66

Query: 65  TLDEALAGC--SLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPV--------ALVFG 114
           + DE +     S+ V  +AR       + D  E       +A    V         LVFG
Sbjct: 67  SWDEFMKQEPESIKVAFTARDGK-GRQVRDVDEVLKDIADKAPQFQVESDVPYVVHLVFG 125

Query: 115 RERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA--TQENGEQVEH 172
            E  GL  E+L+  ++   I    +  SLNLA A  +  Y +R  W    T+ +G +V  
Sbjct: 126 PEDWGLAGEDLEHANFCACIPTFGDNWSLNLAQATLLGMYSLRRTWGGQRTKLDGGKVRR 185

Query: 173 EETPYPLVDDLERFYGHLEQTLLATGF-IRENHPGQVMNKLRRLFTRARPESQELNILRG 231
                  +D        LE+     GF +       V   LRR+  +  P  +EL IL  
Sbjct: 186 APQGIDGIDPEATLKTWLEEM----GFDLTRQRKINVFTVLRRMLLQNTPTKKELVILET 241

Query: 232 ILASIEQQNKGNKA 245
           +L    ++ +  K 
Sbjct: 242 VLQQSIRKLREWKE 255


>UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes
           RepID=B0K5F8_THEPX
          Length = 247

 Score =  156 bits (396), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 17/158 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
           +   ++L E +   N+G++ R+ +  G+  + +     V  ++  +  +AGA + +  A 
Sbjct: 95  KPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAK 154

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+ +       +VGT                          + PVA V G E  
Sbjct: 155 VSNINNTIRDLKERGLWIVGTD-------------VNAEKSFEELNYDFPVAFVIGNEGK 201

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           G++   LQ C + V I    + +SLN ++A  ++ Y+V
Sbjct: 202 GVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQV 239


>UniRef50_A8A8Q9 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Ignicoccus hospitalis
           KIN4/I RepID=A8A8Q9_IGNH4
          Length = 228

 Score =  156 bits (396), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 20/242 (8%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI 62
            +R+VLVE     N G + R  K   +  +  V P     D + +  AA   D +    +
Sbjct: 2   KVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKV 61

Query: 63  VDTLDEALAGCSLVVGTSAR--SRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           VD   EAL G   VV TSA+  S       + P E   K         + LVFGRE VGL
Sbjct: 62  VDDYKEALEGL--VVCTSAKVSSADPLRDFVLPWELKEKFGE---PERLTLVFGRESVGL 116

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA-WLATQENGEQVEHEETPYPL 179
           T EEL++C   + + A+P+Y  +NL+ AV V+ +EV     +      E+ +  +    L
Sbjct: 117 TREELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLAL 176

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
                     L + L+      E    +V   ++RL  +A    QEL  L  +L+    +
Sbjct: 177 -----GVAERLARALIK----DEAKRERVTVAIKRLLAKA--TRQELRNLLYLLSKCANR 225

Query: 240 NK 241
             
Sbjct: 226 LG 227


>UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus
           RepID=C7REQ2_ANAPD
          Length = 234

 Score =  156 bits (396), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 17/157 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           I+L +     N+G++ R+ ++ G   + +         S     +AGA + I    + + 
Sbjct: 87  IILDKIEDPHNLGAIIRSAESFGFDAVIIPERRSASVTSTVYKTSAGAINNIKVVRVTNL 146

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T+ +       + G +              E             V LV G E  G++ 
Sbjct: 147 TRTIKDLKDKGFWIYGLAG-------------EAHSDISHADLRGKVGLVVGNEGEGISR 193

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
              + C   + I      +SLN ++A  +  YE+   
Sbjct: 194 LVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQ 230


>UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86
           Tax=Bacteria RepID=YACO_BACSU
          Length = 249

 Score =  155 bits (394), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 17/163 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           ++L E     N+GS+ R    +G   + +     V   +     + GA + I  A + + 
Sbjct: 100 LILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNL 159

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             TL+E       VVGT A +R                     N P+ALV G E  G+  
Sbjct: 160 ARTLEEMKERGIWVVGTDASAR-------------EDFRNMDGNMPLALVIGSEGKGMGR 206

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
              +KC + + +    + +SLN ++A  ++ YEV        E
Sbjct: 207 LVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE 249


>UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria
           RepID=Q3AXD9_SYNS9
          Length = 652

 Score =  154 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 18/186 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + + L   +   N+G+V R+ + MG   L L           A  +AAGA + +  A 
Sbjct: 382 PPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAGAMEHLPVAR 441

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+   +L++       V+G +A             E  +  +      P+ LV G E  
Sbjct: 442 VVNLNRSLEKLKDSGYRVIGLAA-------------EGDVTLMDVDLEGPLVLVTGSEDQ 488

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV-RMAWLATQENGEQVEHEETPY 177
           GL+    + C   V I       SLN ++A  +  YEV R  W+              P 
Sbjct: 489 GLSLLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRNWMKDIHGQAPSPPIVRPQ 548

Query: 178 PLVDDL 183
               ++
Sbjct: 549 MKTQEV 554


>UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria
           RepID=Q1ISZ4_ACIBL
          Length = 261

 Score =  154 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 10/169 (5%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
             +VL       N+G++ R+    G+  + +     V     A+  +AGA++ +  A + 
Sbjct: 94  FVVVLDGIEDPHNLGALIRSADGAGVDGVVIPERRAVGVTGTAMKASAGAAEYVPIARVT 153

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + +  ++           + +   W +               N  +ALV G E  GL + 
Sbjct: 154 N-IARSIEDL--------KDKYNVWTVGLDERGTQNYDEIDYNMSLALVLGAEGKGLHDL 204

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172
             +KC   V I    E SSLN+++A  ++ YEV     A          
Sbjct: 205 VRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQRRAKVAGAGSPGT 253


>UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes
           RepID=A3DH38_CLOTH
          Length = 277

 Score =  154 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 17/159 (10%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            I+L   +   N+GS+ R    +G   + +        ++     +AGA + +  A + +
Sbjct: 130 IIILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVPVARVTN 189

Query: 65  ---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              T++        +VGT                            PVALV G E  G+ 
Sbjct: 190 ISQTIEYLKKKNIWIVGTDL-------------SGEKPFFEADLKGPVALVIGSEGEGMG 236

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
               +KC + V I    + SSLN A+A  +I YE+R   
Sbjct: 237 RLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQR 275


>UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112
           Tax=Proteobacteria RepID=RLMB_NITEU
          Length = 260

 Score =  154 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + +VL       N+G+  R     G+  + +     V   +    +A+GA D +    
Sbjct: 95  PALLLVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATVHKVASGAVDTVPFFA 154

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   TL E       +VGT+A             +      +     P+A V G E  
Sbjct: 155 VTNLARTLRELKEMGLWIVGTAA-------------DAPDTLDSVTLTRPLAWVLGAEDG 201

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEET 175
           G+     + C   V+I  +    SLN++++  +  +E          +G  V   + 
Sbjct: 202 GMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQRTGSGLNVPAPKN 258


>UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ
          Length = 247

 Score =  154 bits (390), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 17/160 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           ++L   +   N G++ R    +G+  + +     V  +   +  ++GA++ +    + + 
Sbjct: 101 LILDHLTDPQNFGAIIRTADAVGVDGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNL 160

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T+ +       ++GT               +       E  N P+ALV G E  G++ 
Sbjct: 161 RQTISKLKEQWIWILGTD-------------IDGDRGIFEENYNIPLALVVGNEASGMSP 207

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
              ++C +   I      +SLN ++A  V+ YE+      
Sbjct: 208 LVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQKTN 247


>UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales
           RepID=Q1J4P0_STRPF
          Length = 257

 Score =  154 bits (390), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + ++L   +   N+GS+ R      +  + +     V         + GA + I  A 
Sbjct: 109 NPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVSKTSTGAVEHIPIAR 168

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   TLD+  A    + GT             P +C         N  +ALV G E  
Sbjct: 169 VTNLSQTLDKLKARGFWIFGTDMNG--------TPSDCWNT------NGKLALVIGNEGK 214

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
           G++    ++    + I  N    SLN ++A  ++ YEV     
Sbjct: 215 GISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR 257


>UniRef50_A9B6Z8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B6Z8_HERA2
          Length = 241

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 8/237 (3%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           +  NI  VL E     N+GS  RA+   G   L LV P+     +   +A  +  ++   
Sbjct: 5   IFANIITVLHEPQREVNIGSTVRALLNTGFQRLRLVQPVAYSIERLDDMAHRSGPLVEQI 64

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
               +L EALA  S VVG S RSR     +  P E      A AA  PVA VFGRE  GL
Sbjct: 65  ETFASLGEALANVSYVVGFSGRSRGERQAVSLP-EFAPTLTALAATAPVAFVFGREDRGL 123

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            N  +++C   ++I  +P Y SLNLA AV +  Y +R    + +                
Sbjct: 124 DNAAIEQCSQLISIPVDPSYPSLNLADAVLLALYTIRGLATSAEPL------PSPDLADQ 177

Query: 181 DDLERFYGHLEQTLLATGFIREN-HPGQVMNKLRRLFTRARPESQELNILRGILASI 236
              E     L+Q L    F R        +  +R L  R+RP   E+ ++  I   +
Sbjct: 178 ASHELLLNLLDQLLTKLNFSRTAGQQASAVRVMRDLLARSRPSPSEIALVTAICRKM 234


>UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus
           capsulatus RepID=Q606P1_METCA
          Length = 250

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63
           + +VL       N+G+  R     G+  L +     V        +A+GA++ +    + 
Sbjct: 99  LYLVLDHVQDPHNLGACLRTCDAAGVKGLVVTKDQSVGLTPTVAKVASGAAETVPVYRVT 158

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L   L             +   W +    E            P+ +V G E VGL   
Sbjct: 159 N-LARCLDRF---------KQRGYWVVGAAGEAERTLYELDLRLPLVVVMGAEGVGLRRL 208

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
             ++C + + I       SLNL++A  ++ YEV         
Sbjct: 209 TRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRSRPAP 250


>UniRef50_Q9YEM3 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix
           RepID=Q9YEM3_AERPE
          Length = 243

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 15/244 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           ++ +RIVLVET    N+G VAR  +      ++LV+P      +A   AA A+  +  A 
Sbjct: 1   MEKLRIVLVETEGAVNLGFVARLAENFEADEIYLVSPRASL-EEAKRYAARAAWRLDAAR 59

Query: 62  IVDTLDEALAGCSLVVGTS--ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           +V  L+EAL G S  + TS     R      L P E        A    VA+VFGRE VG
Sbjct: 60  VVSNLEEALRGVSASLCTSSHMSDRDALRAPLAPWEAAEVL--AATPGTVAIVFGRESVG 117

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL 179
           LT  E+  C  + +I A+P Y SLNL+ A  +  YEV  A          V+ E      
Sbjct: 118 LTRGEIALCSLYSSIPASPRYPSLNLSNAAAIYLYEVYKARRGGAVARGGVDEELIKLLR 177

Query: 180 VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
                          LA+  +      +V   L R+ +++    +E+  L  +L+   + 
Sbjct: 178 A----------YAAALASRLVHRERAEEVAVSLVRIASKSVMARREVENLIYLLSKACRA 227

Query: 240 NKGN 243
            +G 
Sbjct: 228 VEGC 231


>UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IX93_NOSP7
          Length = 363

 Score =  154 bits (389), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 17/178 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
             + +V    +   N+G++ R  + +G   L +         S  + +AAGA +    + 
Sbjct: 198 DPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQRRASGITSTVMKVAAGALENFTVSR 257

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L+E       + GT+A                          P+ LV G E  
Sbjct: 258 VVNLSRALEELKEAGFWIYGTAA-------------SGSEPVHTVNFKGPIVLVIGSEGE 304

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
           GL     + C + V+I    +  SLN ++A  +  YE+           ++V+     
Sbjct: 305 GLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQRSLNTLYLDKVQKISLK 362


>UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes
           RepID=Q724H1_LISMF
          Length = 251

 Score =  154 bits (389), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 17/160 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           I+L E     N+GS+ R   ++G   + +     V         + GA + +    + + 
Sbjct: 102 IILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNM 161

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T++E       + GT A+                       + P+A+V G E  G++ 
Sbjct: 162 VRTMEELQKRGLWIFGTDAK-------------GSSDYRTMDVDMPLAIVIGSEGFGMSC 208

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
              +KC + V +    + +SLN ++A  ++ YEV      
Sbjct: 209 LVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKRFP 248


>UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus
           carboxydivorans Nor1 RepID=A1HPG2_9FIRM
          Length = 270

 Score =  154 bits (389), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 11/158 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIV 63
           + +VL      GN+G+V R     G   + L        S     A  G+   +     V
Sbjct: 119 LIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITGV 178

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
              + A          +   R     +    +           +PVA+VFG E  G++  
Sbjct: 179 AEQEVA----------AFLERQGIRLLATALDSSSLYHDVDLRSPVAIVFGNEGAGVSKV 228

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
            L+K    + I       SLN+A+A  VI YE R    
Sbjct: 229 ILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQRR 266


>UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7
           Tax=Staphylococcaceae RepID=TRMHL_STAEQ
          Length = 249

 Score =  153 bits (388), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           I+L       N+GS+ R     G+  + +     V         + GA   +    + + 
Sbjct: 98  IILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNL 157

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T+DE       + GT A                       A+  + +V G E  G++ 
Sbjct: 158 SKTIDELKDNGFWIAGTEA-------------NNATDYRDLQADMSLGIVIGSEGQGMSR 204

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
               KC +H+ I      +SLN ++A  ++ YEV       +E  
Sbjct: 205 LVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRKRHQLEEKS 249


>UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86
           Tax=Firmicutes RepID=TRMHL_STAAC
          Length = 248

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 17/163 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           ++L       N+GS+ R     G+  + +     V         + GA + +    + + 
Sbjct: 98  LILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNL 157

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T+DE       V GT A                       A+  +A+V G E  G++ 
Sbjct: 158 AKTIDELKDNGFWVAGTEA-------------NNATDYRNLEADMSLAIVIGSEGQGMSR 204

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
               KC +++ I      +SLN ++A  ++ YEV        E
Sbjct: 205 LVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHDVGE 247


>UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria
           RepID=B8HJN1_CYAP4
          Length = 387

 Score =  152 bits (386), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + +     +   N+G++ R  + +G   L +     V   S    +AAGA +    A +V
Sbjct: 220 VLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVGITSTVAKVAAGALEHFAVARVV 279

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +    L++  A    + G +A                    +   + PV LV G E  GL
Sbjct: 280 NLNQALEQLKAAGFWIYGMAA-------------TAAKPIYSVEFSGPVVLVVGAEGTGL 326

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEH 172
           +    + C   V+I    +  SLN ++A  +  YE+     +T       +H
Sbjct: 327 SLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSSTSVRQPLPQH 378


>UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC
           51172 RepID=C2BF70_9FIRM
          Length = 239

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 17/157 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVDT 65
           I+L +     N+G++ R+ ++ G   + +               +AGA + I    + +T
Sbjct: 92  IILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASVSPIVYKTSAGAINNINIIMVKNT 151

Query: 66  ---LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
              ++E       V G +              E             V L+ G E  GL+ 
Sbjct: 152 NRAIEEIKEAGFWVYGLAG-------------EASSPIDQVDLKGKVCLIVGNEGKGLSR 198

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
              + C   + I      +SLN ++A  +  YEV   
Sbjct: 199 LVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQ 235


>UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus
           sp. MC-1 RepID=A0L4P9_MAGSM
          Length = 246

 Score =  152 bits (384), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 10/157 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63
           + ++L       N+G++ R+ +  G   + L      P ++ AI  +AGA++ +    + 
Sbjct: 97  LLVILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVT 156

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L  A+             R +    L                P+ALV G E  GL   
Sbjct: 157 N-LARAIEQLQ--------QRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRL 207

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             ++C    AI       SLN+++A  V  YEV    
Sbjct: 208 TRERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQR 244


>UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales
           RepID=B0K3L2_THEPX
          Length = 254

 Score =  151 bits (383), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 17/161 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
           + I I+       GN+G++ R     G + ++ +N  V   + + +  + G+   I    
Sbjct: 105 KGIYIIADNIQDPGNLGTIIRTADAFGASAIFTINNCVDVFNPKVLRASMGSIFHIPVIV 164

Query: 62  IVDT-LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
                L +       V  T  ++R L                   +  VA V G E  G+
Sbjct: 165 TASQILLKLKQRGIKVFATHLKARKL-------------VHECNISDKVAFVLGNEAKGV 211

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
           +   +      V I    E  SLN+++A  +  YE +   L
Sbjct: 212 S--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQRQRL 250


>UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE
          Length = 365

 Score =  151 bits (383), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 17/185 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + +     +   N+G++ R+ + +G   + +     V   S    ++AGA + I  A ++
Sbjct: 191 VIVAADGITDPHNLGAIIRSAEAIGAQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVI 250

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +    L+   +    + G +A             E          + PV LV G E  GL
Sbjct: 251 NLGRALEYLKSNSFWIYGLTA-------------EAAQSIHTTDFSAPVVLVVGAEGSGL 297

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +      C   V+I  + +  SLN ++A  +  YE+       +      +  +      
Sbjct: 298 SLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYRQTWIDKLPVLTRKKLQKGSVEA 357

Query: 181 DDLER 185
             LER
Sbjct: 358 SKLER 362


>UniRef50_A8J9D1 Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii
           RepID=A8J9D1_CHLRE
          Length = 154

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIVD 64
            ++LVE     N+G+ ARAMK  GL +L +V P    P+  A+A ++ A+D++  A + D
Sbjct: 2   AVILVEPQFGENIGAAARAMKNFGLHDLRVVRPRDGWPNPLAVATSSHAADLLEAARLYD 61

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVA-LVFGRERVGLTNE 123
           +++ A+A    V   +AR+R +  P +  ++    +   AA  P A L+FGRE  GLTNE
Sbjct: 62  SVEAAIADLDRVYAATARTRFMHKPFVTSKQGPADATDVAARMPRAGLMFGRESSGLTNE 121

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
           E+   +  + I ANP Y  LNLA A+  ++YE+
Sbjct: 122 EVALANKVLTIEANPVYPVLNLAQAIVCVSYEL 154


>UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria
           RepID=A2C1X9_PROM1
          Length = 442

 Score =  151 bits (382), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 17/184 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
            ++ + L   +   N+G++ R+ + +G   L L              +AAGA + +  A 
Sbjct: 269 SSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAGALEHLPVAR 328

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+   +L++       VVG                E            P+ +V G E  
Sbjct: 329 VVNLNRSLEKLKDEGYTVVGL-------------AEEGSSTLSEIKFQGPLVVVVGSEDK 375

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYP 178
           G++    + C   V I      +SLN ++A  +  YEV  +      +G+          
Sbjct: 376 GISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVARSKWMRSISGQDPSPRLLKPQ 435

Query: 179 LVDD 182
           +  +
Sbjct: 436 ISSE 439


>UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19
           Tax=Moraxellaceae RepID=RLMB_ACIAD
          Length = 248

 Score =  150 bits (380), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 15/162 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + + L + +   N+G+  R    MG+  + +           A  +AAG ++ +    + 
Sbjct: 98  LLLALDQVTDPHNLGACIRTAAAMGIAAVIVPRDRSASLTPTARKVAAGGAEKVKFIQVT 157

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   TL    A   + V  +              E  L       +  VA+V G E  GL
Sbjct: 158 NLARTLAHIKAHFFVKVVGTM-----------LDEKALPIQKYDFSGNVAIVMGAEDTGL 206

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
                 +C   V I  +    SLN+++A  +  YE     L 
Sbjct: 207 RPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQRLG 248


>UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19
           Tax=Proteobacteria RepID=RLMB_COXBU
          Length = 250

 Score =  150 bits (380), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 17/168 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + ++L       N+G+  R+    G+  +       V        +A GA+++     
Sbjct: 96  PALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTPFIR 155

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+D        +VGT               E             +A+V G E  
Sbjct: 156 VTNLSRTIDWLQKEGVWIVGT-------------AVEAETLIQEIDLTGDIAIVLGSEGA 202

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
           GL     ++C +   I       SLN+++A  +  YEV+    A   +
Sbjct: 203 GLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQREAPAPS 250


>UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285
           Tax=Proteobacteria RepID=RLMB_PSEPK
          Length = 248

 Score =  150 bits (379), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 17/162 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61
             + +VL   +   N+G+  R     G T + +              +A GA++VI    
Sbjct: 96  PPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVA 155

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   TL++       VVGT+              E   +   +    P+ ++ G E  
Sbjct: 156 VTNLARTLEKLQQRGLWVVGTAG-------------EAEQEIYQQDLTGPLVMIMGAEGK 202

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G+     + C + V +      SSLN+++A  V  +E     
Sbjct: 203 GMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQR 244


>UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8
           Tax=Desulfuromonadales RepID=A1APM1_PELPD
          Length = 251

 Score =  150 bits (379), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD- 64
           +VL       N+G++ R     G + + +           A   +AGA + I  A + + 
Sbjct: 99  LVLDGIQDPHNLGALIRTAACAGASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNI 158

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             +L++       V G S              E        A +  +ALV G E  G+  
Sbjct: 159 AQSLEKLKRSGYWVYGLSG-------------EADASLYEVAFSGKIALVIGGEGEGIRP 205

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
              ++C   V+I       SLN ++A  +  YEV       +   
Sbjct: 206 LVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVARCLRGEKPGR 250


>UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae
           RepID=A8RFN1_9FIRM
          Length = 241

 Score =  149 bits (378), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + ++L E     N+G++ R    +G+  + +     VK       ++ GA D +  A + 
Sbjct: 92  LFVMLDELEDPHNLGAILRTCDCVGVDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVT 151

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L + L G           +   W      +        + + P+ LV G E  G++  
Sbjct: 152 N-LAQTLKGL---------KKEGFWVAGADFDNSQDYRQASYDMPLVLVVGSEGFGISPL 201

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
             + C + V +      SSLN ++A  V+ Y++    
Sbjct: 202 VKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQR 238


>UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23
           Tax=Proteobacteria RepID=RLMB_CHRVO
          Length = 248

 Score =  149 bits (378), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 17/162 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61
             + ++L   +   N+G+  R    MG   +          ++    +A GA++V+    
Sbjct: 95  PPLLLILDGVTDPHNLGACLRVADAMGAHAVIAPKDRSATLNATVSKVACGAAEVVPYIT 154

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   TL +       + GT+              E         A+ P+A V G E  
Sbjct: 155 VTNLARTLRDLKDAGVWIAGTTM-------------EADTDLYHFDASGPLAWVMGAEGE 201

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G+     + C   V+I       SLN++++  ++  E R   
Sbjct: 202 GMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243


>UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L451_EXISA
          Length = 248

 Score =  149 bits (377), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VL      GN+G++ R     G   + L    V P +  +  A   S    N   VD L
Sbjct: 106 LVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVTSVDLL 165

Query: 67  D---EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           +   E       V GT+                       A    VALV G E  G+  +
Sbjct: 166 EKLPELKEDGFHVYGTALSK-------------ATSYEQVAFEEKVALVIGNEAQGVHAD 212

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
            L  C   V I    +  SLN A+A  ++ Y + + 
Sbjct: 213 VLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248


>UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus
           RepID=D2RLA3_ACIFE
          Length = 260

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 15/159 (9%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIVDT 65
           +VL      GN+G++ R    +G   + L+       +  +  +  G+   +     V T
Sbjct: 114 LVLDRIRDPGNLGTLIRTADALGAAGVVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKT 173

Query: 66  --LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
             L+E        +  +A             E              ALV G E  G++ E
Sbjct: 174 GELEEWCRQHGYALWATA------------LEGAEDMTRLTWPEKTALVLGSEAEGVSPE 221

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
            L      V I       SLN+A+A  ++ +E   A+ +
Sbjct: 222 ILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAARAFSS 260


>UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales
           RepID=C6CVT7_PAESJ
          Length = 264

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 16/161 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIG--N 59
            ++ +VL      GN+G++ R+   +G   + L    V   +     +  G+   +    
Sbjct: 114 NSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSVDLYNPKTVRSTMGSLFHLPIIE 173

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           A + + L EA +    +VGTS              +               L+ G E  G
Sbjct: 174 ADLAELLPEAQSKGIKLVGTSL-------------QATHTCYTYDWTAGTWLLMGNESEG 220

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           L++         V I    E  SLN+AMA  V+ YE     
Sbjct: 221 LSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQR 261


>UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class)
           RepID=A9WFI1_CHLAA
          Length = 261

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQA-IALAAGASDVIGNAHIVD 64
            +VLVE +  GN+G++ R     G + + LV     P   A +  + GA      A    
Sbjct: 117 WVVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIART-- 174

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
           +  + L        T AR   +       R       A     P+ LV G ER GLT+E+
Sbjct: 175 SWPDLL--------TWARQHRIALVGSSDR-GASDYRATTYPRPLLLVLGSERHGLTDEQ 225

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           L  C   V I       SLNLA+A  ++ YE   + 
Sbjct: 226 LAACDLVVRIPMRGRSDSLNLAVAAGILMYEATRSQ 261


>UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria
           RepID=A7B5E9_RUMGN
          Length = 275

 Score =  148 bits (375), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 9/155 (5%)

Query: 8   VLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLD 67
           +L      GN+G++ R  +  G+T + +    V   +     +   +        V+ L 
Sbjct: 130 ILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYVEDLR 189

Query: 68  EALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK 127
           E +         + + + +        +       E      A + G E  GL  E  Q 
Sbjct: 190 ETIH--------TLKEKNIKSYAAHL-DGKNTYDKEDYRQGTAFLIGNEGNGLREEIAQC 240

Query: 128 CHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
               + I    +  SLN A+A  V+ +EV      
Sbjct: 241 ADTWIRIPMCGQVESLNAAVAATVLMFEVSRQRRG 275


>UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27
           Tax=Neisseria RepID=RLMB_NEIMB
          Length = 250

 Score =  148 bits (375), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 17/162 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + ++L   +   N+G+  R    MG+  +          ++    +A GA++ +    
Sbjct: 95  PPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYIT 154

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   TL E       ++GT                              A V G E  
Sbjct: 155 VTNLARTLRELKEYGIWIIGTDM-------------SGESDLYHCNLPDSAAWVMGNEGD 201

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G+     + C   V+I       S+N++++  ++  E R   
Sbjct: 202 GMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243


>UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular
           organisms RepID=RLMB_XYLFT
          Length = 249

 Score =  148 bits (375), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 17/160 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + +VL       N+G+  R+    G+T + +     V  ++     ++GA+D +    +V
Sbjct: 100 LLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVV 159

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   +L E       + G +              E      A      VALV G E  GL
Sbjct: 160 NLARSLRELQKQDVWIYGLAG-------------EVETSLYALDLRGNVALVLGGEADGL 206

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
                + C     I    E  SLN+++A  V  +E     
Sbjct: 207 RRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQR 246


>UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=A8STN2_9FIRM
          Length = 272

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 10/161 (6%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            ++L      GNMG++ R+ +  G+T + +      P +  +  +   +         D 
Sbjct: 122 YLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDD 181

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L          + T    +     +      G +         +A + G E  GL+    
Sbjct: 182 L----------IYTIDALKRKGVLIYGAHLDGEELYDTEFPDKIAFLIGNEGNGLSKAVS 231

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
                 + I    +  SLN A++  +++YE      + ++N
Sbjct: 232 DTADRLLRIPMEGKVESLNAAISATLLSYEAMRQRRSARQN 272


>UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria
           RepID=Q1D7V2_MYXXD
          Length = 282

 Score =  148 bits (374), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 17/164 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + +VL       N+G++ R+   +G   + +     V+        +AGA +    A 
Sbjct: 128 PPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAVQVTGTVAKASAGAVEHSRIAR 187

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L+E       V                  +      +   + P+ALV G E  
Sbjct: 188 VVNISRALEELKEAGLWV-------------AAADVDAKEPMWSARLDGPLALVVGAEGA 234

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           G+ +  L+ C + + I    +  SLN +++  ++ YEV      
Sbjct: 235 GVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQRGT 278


>UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1
           Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen
           RepID=Q0AUG1_SYNWW
          Length = 248

 Score =  148 bits (374), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 17/168 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
               ++L       N+G++ R  +  G+  + + +    + +     ++AGA + +    
Sbjct: 94  PPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIR 153

Query: 62  ---IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
              +V+T+         V+G  A++R                   +  +P ALV G E  
Sbjct: 154 ENNLVNTIKYLKQEGFWVLGADAKAR-------------QSYFNTSIPSPTALVIGGEGQ 200

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEN 166
           G+     + C   V I    + +SLN ++A  ++ YEV    L     
Sbjct: 201 GIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQRLNLLPG 248


>UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA
          Length = 255

 Score =  148 bits (374), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHI- 62
           + ++L       N+GS+ R+    G++ + +         S     + GA D +  A + 
Sbjct: 107 LLLMLDNIEDPHNLGSILRSADATGVSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVN 166

Query: 63  --VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             V T          + GT+                        AN    LV G E  G+
Sbjct: 167 NLVQTCQALKDRGYWIFGTAMEGDDYRKW--------------NANGKTVLVIGNEGKGI 212

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           +   L++    + I       SLN ++A  V+ Y+   +   
Sbjct: 213 SPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFNSRHP 254


>UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella
           RepID=D1BMG9_VEIPT
          Length = 264

 Score =  148 bits (374), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ++  + I L      GN+G++ R     G+  ++L+   V P +     +  ++  +   
Sbjct: 112 IVDGLYITLDGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSA--LHKI 169

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + + +       +L +     + +     +   E               LV G E  G+
Sbjct: 170 PLYEDI-------TLTLLHDMVTESNMTSYVTALEHSNPYHTVRYAKRTMLVLGNEGNGV 222

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           T E +  C   + I    +  SLN+++A  +  Y+V+   ++
Sbjct: 223 TPEVMNLCTNRIMIPMYGDMESLNVSVAAALCMYKVQEQLMS 264


>UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium
           RepID=B2V596_CLOBA
          Length = 262

 Score =  147 bits (373), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 17/160 (10%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIV 63
           +  +   +    GN+G++ R     G+  + L    V   ++    +   S      +  
Sbjct: 111 DFYLFCDKVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYD 170

Query: 64  DT----LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           D     +         ++ TS              E       E     + L  G E  G
Sbjct: 171 DDEFSLIKSLKKDGFTLIVTSL-------------ESSKDFFKEDLKGKIILTVGNEGNG 217

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
           ++NE L      V I       SLN+A+A  +I YE    
Sbjct: 218 VSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQ 257


>UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD
          Length = 255

 Score =  147 bits (373), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNA 60
              + +VL E +   N G++ R  +  G   + +      +        AAGA + +  A
Sbjct: 105 FAPLVVVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVA 164

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
            + + + +AL             +   W +    E  +         P A+V G E  G+
Sbjct: 165 RVAN-VAQALQRL---------KQAGYWIVGADVEAKVPYTEVDYRGPTAVVIGSEGQGM 214

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
                ++C + V+I       SLN ++A  V+ YE     
Sbjct: 215 RRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254


>UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira
           crunogena XCL-2 RepID=Q31FJ2_THICR
          Length = 244

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNA- 60
             + + L E     N+G++ R     G+T + +     V  ++    +A GA++ +    
Sbjct: 93  NPLFLFLDEVQDPHNLGAILRTADATGVTAVVIPKHNSVGVNATVRKVACGAAETVKVVV 152

Query: 61  --HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             ++V T+ E       V G +              E             V LV G E  
Sbjct: 153 VSNLVRTIKELQQAGLWVTGLAG-------------ETNTTLYQLDFKGAVGLVMGAEGS 199

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           GL     + C +  AI       SLN+++A  V+ YEV    L +
Sbjct: 200 GLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQRLQS 244


>UniRef50_B0CFB1 RNA methyltransferase, TrmH family n=2 Tax=Cyanobacteria
           RepID=B0CFB1_ACAM1
          Length = 243

 Score =  147 bits (372), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 22/243 (9%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAHI 62
               +LVE+    N+G+ ARA+ TMG T+L LV P    +  +A  LA G+  V+  A I
Sbjct: 2   QFSFILVESEVPENLGAAARALNTMGHTDLRLVRPRCDRNSEKAQVLAHGSQAVLSAAPI 61

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLT 121
              L +AL        T+AR R   +  +  RE   +  A+      VA VFG ER GL 
Sbjct: 62  YQNLSDALHDIDFACATTARHRYEKYQYISVREVPQRLQAKGETLQQVAFVFGGERSGLN 121

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVD 181
             ++  C     I     Y SLNLA AV V ++ +      +  + +      TP P ++
Sbjct: 122 RHDIDCCDLITTIPQGNPYPSLNLAQAVMVYSFMLS----ESAVHIKDQRLNRTPMPPLE 177

Query: 182 DLERFYGHLE----QTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIE 237
                Y +L+    Q +   G + E +   V   L      AR  +++L +L  I A I+
Sbjct: 178 -----YANLKHSSLQLMERIG-LAERYQKYVTRGL------ARLGTEDLYLLHNIRACID 225

Query: 238 QQN 240
           +  
Sbjct: 226 RTL 228


>UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum
           ATCC 49989 RepID=C7H0N3_9FIRM
          Length = 297

 Score =  146 bits (370), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 12/157 (7%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAH 61
           + + +VL       N+G++ R  +  G+  + +              ++ GA   I    
Sbjct: 147 KPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPCIM 206

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + + L  AL           + R     +      G     +     VALV G E  G++
Sbjct: 207 VTN-LAAALKDL--------KQRGF--WVYAADANGDSCFEQEFGGSVALVLGNEGKGIS 255

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
              L +  Y V+I    ++ SLN+++A  ++ YE+  
Sbjct: 256 KLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVR 292


>UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae
           RepID=A9BJB6_PETMO
          Length = 240

 Score =  146 bits (370), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 18/158 (11%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIVD- 64
           ++L +     N G++ R     G+  + +     V+     I +++G    I    + + 
Sbjct: 93  VILDQIQDPHNFGAIVRTSVAAGVDAIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNL 152

Query: 65  --TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
             T++        V G                  G           + LVFG E  G+  
Sbjct: 153 SNTIETLKKENVWVYG--------------ADVEGKPYYEIDWQGKICLVFGNEGNGIRK 198

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
                C   V+I       SLN++++  +I +E +   
Sbjct: 199 NVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236


>UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7
           Tax=Fusobacteriaceae RepID=D1AP92_SEBTE
          Length = 234

 Score =  146 bits (370), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63
           I +VL +     N G++ R+ +  G+  + + +   V      +  + GA + +    + 
Sbjct: 88  IVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVT 147

Query: 64  ---DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
              D++D+       + G  A             +   +   E     + LV G E  G+
Sbjct: 148 NVSDSMDKLKKYGYFIYGAEA-------------DGETEYYNEPFPEKLCLVLGSEGKGM 194

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
             +  + C   + I  + + +SLN+++A  ++  E+  
Sbjct: 195 RKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISK 232


>UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YIM1_THEYD
          Length = 261

 Score =  146 bits (369), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 14/165 (8%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAGASDVIGNAH 61
               ++       GN+G++ RA +  G   + + +    P  ++A+  +AG+   +    
Sbjct: 109 PTFIVIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIK 168

Query: 62  I-VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           + V  ++E ++   L +            ++   +  + S       P+A+VFG E  G+
Sbjct: 169 VTVKEIEEFVSKYGLNL------------VITDLKATISSFNMDFTKPLAIVFGNESKGV 216

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
           + +     H    I    +  SLN+AMA   I YE+         
Sbjct: 217 SQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQRFLKSP 261


>UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium
           modesticaldum Ice1 RepID=B0TC37_HELMI
          Length = 256

 Score =  146 bits (369), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAH 61
               ++L       N+G++ R  +  G   + +         S     +AGA + +  A 
Sbjct: 100 PPFVLLLDGLEDPHNIGALLRTAEGAGAHGVIIPKRRGGAITSTVAKASAGAVEYVPIAR 159

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+ +       ++G                +       +    PV L+ G E  
Sbjct: 160 VTNLVQTVGQLKKAGLWIIG-------------SAMDAPRPYFRQDFRGPVGLIVGSEGK 206

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
           G++    + C + V+I    +  SLN ++A  ++ YE         +  +
Sbjct: 207 GISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQLQEGVKAPQ 256


>UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=B0P8C0_9FIRM
          Length = 256

 Score =  146 bits (369), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 18/165 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVN-PLVKPDSQAIALAAGASDVIGNAH 61
             + ++        N+G++ R  +  G   L +         +     +AGA + +  A 
Sbjct: 106 PPLLVIADSIEDPHNLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVAR 165

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+ E  A    + G  A               G +        P ALV G E  
Sbjct: 166 VTNLVSTIKELKARGVWIYGADA--------------SGARWDQTDLTGPSALVIGSEGF 211

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           GL+    + C   +++    E +SLN ++A  ++ YE        
Sbjct: 212 GLSRLVRETCDALLSLPMRGEVNSLNASVAAGILMYEAVRQRTKR 256


>UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1
           Tax=Paulinella chromatophora RepID=B1X411_PAUCH
          Length = 526

 Score =  146 bits (369), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 17/177 (9%)

Query: 10  VETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIVD---T 65
              +   N+G++ R+ + +G   L L              +AAGA + +  A +V+   +
Sbjct: 290 EGLTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRS 349

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           LD        +VG                E  +       N P+ +V G E  GL+    
Sbjct: 350 LDILKDKGYRIVGL-------------ATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTR 396

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDD 182
           + C   + I       SLN ++A  ++ YEV          G+    +     +   
Sbjct: 397 RYCDQLIRIPLRGATPSLNASVASALMLYEVARRTWMKDLGGQSPVPQMVRPSIAGQ 453


>UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus
           SB RepID=Q2LQ81_SYNAS
          Length = 249

 Score =  145 bits (368), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 17/159 (10%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHI 62
           ++ ++L       N+G++ R+    G   + L            I  +AGA+  I  A +
Sbjct: 95  DLVLILDGILDPHNLGALIRSAHCFGANGIILPERRAASVTGTVIKTSAGAARHIPIARV 154

Query: 63  VD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
            +    LDE       + G  AR                          V LV G E  G
Sbjct: 155 ANLARALDELKTKGFWIFGADAR-------------ADQSVSDPDYQGAVGLVMGGESKG 201

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           L     +KC   ++I    +  SLN++++  +I +E+R 
Sbjct: 202 LRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRR 240


>UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister
           invisus DSM 15470 RepID=C9LMK8_9FIRM
          Length = 282

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 18/162 (11%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
             + I+L       N+G++ R  +  G   + L      P  + A+  A+GA   +    
Sbjct: 134 DPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPVTAAAMKTASGAFAYLPVCQ 193

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           I +   TL++        VG                             P+ +V G E  
Sbjct: 194 IGNIRQTLEKLKERGFWAVGADMDGG--------------DLYQADLKGPLVIVMGAEGK 239

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G++    + C + V I    + SSLN+++A  ++ YE     
Sbjct: 240 GISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQR 281


>UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G1K9_ABIDE
          Length = 279

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 9/150 (6%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           +VL +T+  GN+G++ R  +  G+T + +    V   +  +  +   S        V+ L
Sbjct: 139 LVLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDL 198

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
            E +             ++         +          +   A++ G E  GL++E   
Sbjct: 199 KETIKEL---------KKSGISFYATHLKGEKSYKDIKYSGRSAIIVGNEARGLSDEVAD 249

Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEV 156
               +V I    +  SLN A+A  ++ YEV
Sbjct: 250 LADTYVLIPMQGKVESLNAAVAAALMMYEV 279


>UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci
           RepID=Q1IWR8_DEIGD
          Length = 246

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHIV 63
           + ++L   +   N G++ R+ + +G   + +      P     +  AAGA+  +  A   
Sbjct: 89  LIVLLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSPVVVKTAAGATSYLPVAQ-T 147

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
             L   +          A      W      E          +  VALV G E  GL   
Sbjct: 148 KNLPRLI---------DALKEDGVWIYGAAGEAAQDIGRTDLSGKVALVIGAEGEGLRRL 198

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
             +KC   V I    +  SLN ++A  ++ YE   A    +   +
Sbjct: 199 VREKCDALVRIPTRGQVQSLNASVAAGILLYEAARARDKNKSKNK 243


>UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3
           Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8
          Length = 193

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 17/162 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + ++L       N+G++ R     G+  +       V      + ++ GA++ +    
Sbjct: 44  NPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRVSVGAAEKVPFIQ 103

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+ +  +    + GTS +                         P ALV G E  
Sbjct: 104 VTNLARTMKQLQSRGIWIFGTSDKGDRG-------------LYETDFTGPAALVMGAEGE 150

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G+     + C + + I        LN+++A  V  YE+    
Sbjct: 151 GMRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192


>UniRef50_C7DGL7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Micrarchaeum
           acidiphilum ARMAN-2 RepID=C7DGL7_9EURY
          Length = 234

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQ-AIALAAGASDVIGN 59
           M++NI++  VE  +  N+G  AR +K   +  ++LVNP  K + + AI  +  A D+I N
Sbjct: 1   MIKNIKVAFVEPRYQINLGYEARVLKNFEIRKMYLVNPKCKFNGKNAIKYSKHAHDLIEN 60

Query: 60  AHIVDTLDEALAGCSLVVGTSA---RSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRE 116
           A I+  L+  +   S VVGT+A   +SR     ++   E       ++    + L+ GR+
Sbjct: 61  AAILKDLN-GVTRNSFVVGTTALWRKSRKYFDNVMTLPEFEEYIRGKSI-ENMTLLIGRD 118

Query: 117 RVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETP 176
             GL +EEL +C+  V I  +  Y +LN++ A+ ++ Y +       Q+     +     
Sbjct: 119 NTGLNSEELFQCNSIVFIPTSQRYPTLNISHALAILLYAL-----TAQKPSSWPQEIGEL 173

Query: 177 YPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILAS 235
           Y    DL         ++ +  +IR      V      +  RA P  +E+N L    + 
Sbjct: 174 YADSSDLRMIKSLFGASVDSNPYIR--KKETVKKAFENMLVRANPTKKEINALTAAFSK 230


>UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU
          Length = 244

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 17/160 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + ++L       N+G++ R    +G+  + +     V  +     ++ GA D +  A + 
Sbjct: 95  LLLMLDGLEDPHNLGAILRTCDAIGVDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVT 154

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   TL++       VVG                +          N P+ +V G E  G+
Sbjct: 155 NLTRTLEDLKKRSFWVVGCDL-------------DKSQDYRQVDYNMPLVIVIGSEGFGI 201

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           +    + C  +V +      +SLN ++A  VI Y+V  + 
Sbjct: 202 SRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSR 241


>UniRef50_B9Z0Z0 tRNA/rRNA methyltransferase (SpoU) n=7 Tax=Neisseriaceae
           RepID=B9Z0Z0_9NEIS
          Length = 264

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 12/160 (7%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            ++L +    GNMG++ R+    G+  ++L        S  +  A   +  + N H    
Sbjct: 117 CLLLEDIQDPGNMGTILRSAAASGVMEVFLSKGCADVFSPKVLRAGMGAHFVLNLHEAAD 176

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L E L                   ++   E      A+     VA VFG E  G++   L
Sbjct: 177 LAEVL------------GGFAGRKLVTHLEGSQSLYAQDLRGDVAFVFGNEGAGVSAGLL 224

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE 165
           Q     V I       SLN+AMA  +  +E      A+  
Sbjct: 225 QLADCRVRIPMPGHAESLNVAMAATICLFERVRQLDASAA 264


>UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes
           RepID=B8G1U5_DESHD
          Length = 246

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 18/165 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
               +VL E     N+G++ R     G+  + +     V   +     +AGA + +  A 
Sbjct: 95  DPFILVLDEVEDPHNLGALIRTADAAGVHGVIIPKRRSVSLTATVAKTSAGAVEHVLVAR 154

Query: 62  I---VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +   V TL +       V G  A               G +           +V G E  
Sbjct: 155 VGNLVQTLKDLQKAGCWVSGAEA--------------EGTEVYRSDLTGARVIVIGSEGK 200

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           GL+    + C   V++      +SLN ++A  ++ YEV     + 
Sbjct: 201 GLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQRGSR 245


>UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria
           RepID=A6BKK3_9FIRM
          Length = 265

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 18/164 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
               I+L       N+G++ R     G   + +     V   +     +AGA +    A 
Sbjct: 116 DPFLIILDNIEDPHNLGAIIRTANQAGAHGVIIPKRRAVGLTATVARTSAGALNYTPVAK 175

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+++        V        +                     P+ LV G E  
Sbjct: 176 VTNLVKTMEDLKKKGLWFVCADMDGDVMY--------------DVNMKGPIGLVIGNEGE 221

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           G+       C +   I    +  SLN ++A  V+AYE+    + 
Sbjct: 222 GVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQRMQ 265


>UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium
           RepID=B8I1W5_CLOCE
          Length = 269

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 55/153 (35%), Gaps = 9/153 (5%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTL 66
           ++L      GN G++ R     G++ + +    V   S  +  +   S  + +  I + L
Sbjct: 119 VILDCLQDPGNAGTIIRTADAAGISAVLMSKGCVDLYSPKVLRSTMGS--VFHIPIFEGL 176

Query: 67  DEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQ 126
           +  +     V+      +     +            E      A++ G E  G+++E   
Sbjct: 177 N--ITEIIRVL-----KQNDYKVIASHLSGKNNYFQEDLTGRSAIIVGNEANGISDETAY 229

Query: 127 KCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
                V I    +  SLN ++A  V+ YE+   
Sbjct: 230 MADSLVKIPMPGKAESLNASVAASVMIYEIVRQ 262


>UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria
           RepID=Q1NS81_9DELT
          Length = 302

 Score =  144 bits (365), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
             + +VL       N+G+V R+    G+  + L      P     +  AAG + ++    
Sbjct: 145 PPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICR 204

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             +    L         + G S              E            P  LV G E+ 
Sbjct: 205 TTNLAGALGTLKKHGFWIYGASG-------------EASGNLYETDFTGPTCLVLGNEQK 251

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
           G+     + C + +AI       SLN+++A  ++  E+R           
Sbjct: 252 GIRPLLKKHCDFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQHFFAPGKP 301


>UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH
          Length = 246

 Score =  144 bits (365), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 12/157 (7%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAH 61
            N+ I+L      GNMG++ R     G+  + L +  V   +  +  A  G+   I    
Sbjct: 101 NNLIILLDAIQDPGNMGTIIRTADAAGVDAVVLGDGCVDIFNDKVIRATQGSIFHIPI-- 158

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
              TL++ +        T          +       ++    + +  V L+ G E  G+ 
Sbjct: 159 YTATLEQEIHMLQTQGFT---------ILATALHDAVEYTEVSVHNKVGLILGNEGAGIA 209

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
              L K +  + I    +  SLN+ +A  ++ Y ++ 
Sbjct: 210 PSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246


>UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacillus
           RepID=Q1G9C5_LACDA
          Length = 260

 Score =  144 bits (364), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 11/153 (7%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIGNAHIVD 64
            ++L + +  GN+G++ R     G   + L N  V   +  +  +  G+   +       
Sbjct: 118 WVLLDDLADPGNVGTIIRTADAAGFDGVILSNKTVDLYNPKVQRSMQGSQFHLNLIK--A 175

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L +A+A        S ++  +P           +    A    VAL+ G E  G++ E 
Sbjct: 176 DLPDAIA--------SLKAADIPVYASLLDPAAKQLGDFAPVAQVALIIGNEAHGVSPEI 227

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVR 157
                  + I       SLN A+A  ++ Y   
Sbjct: 228 EALADEKLYIPIKGRAESLNAAVAAGIMIYHFS 260


>UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6P2D0_9BACE
          Length = 252

 Score =  144 bits (364), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAHIVD 64
            +VL      GN+G++ R     G   L LVN    P S     A  GA   +       
Sbjct: 110 YLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWET-- 167

Query: 65  TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEE 124
            L+   A              +P      RE  +           A+V G E  G+++E 
Sbjct: 168 DLETVRALLD--------GADIPLYATALREDTVDVRDVDLK-RAAVVIGSEGRGISDEA 218

Query: 125 LQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           L  C   + I       SLN AMA  V+ +E+  
Sbjct: 219 LALCRRTIKIPMRARCESLNAAMAAGVVLWEMCR 252


>UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium
           ATCC 15444 RepID=Q0BY95_HYPNA
          Length = 271

 Score =  144 bits (364), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 12/158 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAHIV 63
           + I L E    GN+G++ R     G++ + L+     P S +A+  + G+   +  A   
Sbjct: 123 LYIALYEVRDPGNLGTILRTADCAGVSGVILIGTCCDPYSFEAVRASMGSVFDVPFA--H 180

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
              D           T  +   +           ++           ++ G E+ GL + 
Sbjct: 181 TDFDAF--------NTWRKGEGMSLTAASVN-GTVRHDGADFTGGSIILMGNEQAGLPDW 231

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
               C     I       SLNLA A  ++ YE      
Sbjct: 232 VEAACDTLSLIPMRGGADSLNLAQASALMIYEAWRQRG 269


>UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum
           DSM 15641 RepID=C7MMG3_CRYCD
          Length = 300

 Score =  144 bits (364), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 11/158 (6%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + IVL   +  GN+G++AR+ +++G   + + N       +     +AGA   I  A + 
Sbjct: 109 LIIVLDHITDAGNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVA 168

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L +ALA                W      +             V LV G E  GL   
Sbjct: 169 N-LQQALARLKN---------EGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARL 218

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
             + C + V++      SSLN+A +  V  YE      
Sbjct: 219 TQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQNR 256


>UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema
           denticola RepID=Q73MR5_TREDE
          Length = 258

 Score =  144 bits (363), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 18/158 (11%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
             ++L   +   N GS+ R+    G+  + +              ++AGA   +    + 
Sbjct: 111 FVVILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVT 170

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T++        + G  A  + LP                       L+ G E  G+
Sbjct: 171 NLVRTVERLKKEGFWIYGADAGGKALP--------------NLTFPKKTVLIMGNEGRGM 216

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           +    + C   V+I    +  SLN+++A  ++ YE+  
Sbjct: 217 SRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISR 254


>UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma
           citri RepID=Q14PR4_SPICI
          Length = 244

 Score =  144 bits (363), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 64/156 (41%), Gaps = 16/156 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHI--- 62
           +VL + S   N G++ R      +  + +++   V  ++     +AGA + +    +   
Sbjct: 98  LVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNL 157

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            + ++        +  TS  ++                     + P+ L+ G E  G++ 
Sbjct: 158 TNAIEYLKKQGFWIYATSLNTK------------AQNVSELKYDIPICLIVGNEGTGISA 205

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
           + L+   +++ I       SLN+++A  ++ Y+++M
Sbjct: 206 KLLKHADFNIYIPTAGHLDSLNVSVASAILIYQIKM 241


>UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella
           haemolysans ATCC 10379 RepID=C5NV68_9BACL
          Length = 271

 Score =  144 bits (363), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 16/157 (10%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAHI--- 62
           ++L       N+G++ R  +  G+  + +           A+  +AGA + +    +   
Sbjct: 125 LILDHIEDPHNLGAIIRTAEASGVKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNL 184

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
            D + +       + GT+   R                   A + P+A+V G E  G++ 
Sbjct: 185 TDAIKKLKEKGFWIAGTTLAER------------SEDYTKIAKDVPLAIVIGNEGEGMSK 232

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 159
               +C +   +    +  SLN ++A  +I YE   +
Sbjct: 233 VVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERIKS 269


>UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3
          Length = 274

 Score =  144 bits (363), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 9/165 (5%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHI 62
             + +VL      GN+G++ R     G+  +WL    V P S  +  ++  S ++     
Sbjct: 119 ARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQ 178

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           + +L   L                   +    +            P  ++FG E  GL+ 
Sbjct: 179 LQSLPPLLEKFHT---------QGLQLIATVPQATQTLWEIDFQRPTIVIFGSEGQGLSA 229

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
             L+   + VAI   P+  SLN+A+AV V+ YE R    A    G
Sbjct: 230 PVLELTTHQVAIPQAPQVESLNVAIAVGVMLYEARRQQWAASTPG 274


>UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
           12042 RepID=B9Y9V6_9FIRM
          Length = 244

 Score =  144 bits (363), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 17/156 (10%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAA-GASDVIG--NAHI 62
            +VL      GN+G++ R     G   + L        ++    +  GA   I      +
Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISRTEL 160

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTN 122
           +  L+E       V+GT               +          +  +A+V G E  G+  
Sbjct: 161 IPALNELKELGVTVIGT-------------ALQGAQPLSELPVSENIAVVLGNEGQGIRP 207

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
             L  C     I  +  + SLN+A+A  +  Y  R 
Sbjct: 208 ATLDICDQRALIEMS-SFESLNVAVAAGICLYRYRR 242


>UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae
           RepID=B3QM30_CHLP8
          Length = 257

 Score =  143 bits (361), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
             + ++L       N+G++ R  + +   ++ ++     P  +     +AGA   +    
Sbjct: 107 SPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPISATVHKASAGALSHMRVCK 166

Query: 62  I---VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +   V TLD        +V                 E            P  LV G E  
Sbjct: 167 VKSLVKTLDLLHERGFSIVAADM-------------EAEHNHTDIDWKRPTVLVMGAEGK 213

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLA 162
           GL +E  ++C   V I       SLN+++A  V+ YE     L 
Sbjct: 214 GLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQRLG 257


>UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium
           EB0_41B09 RepID=A4GI27_9BACT
          Length = 246

 Score =  143 bits (361), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 17/160 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63
           + ++L       N+G+  R    MG+  L       V  ++    +A G ++ +    + 
Sbjct: 99  LFLILDGVVDPQNLGACFRVADAMGVDALICPKDNAVGLNATVRKVACGGAESVPFVVVT 158

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T+         V GT                             +ALV G E  G+
Sbjct: 159 NLARTIRYLKNSNVFVYGTD-------------DNANKSLQKTNFKGSIALVMGSEGKGM 205

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
                + C    +I    +  SLN+++A  +  YE+    
Sbjct: 206 RRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245


>UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PD55_9FIRM
          Length = 264

 Score =  143 bits (361), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDT 65
            ++L      GN+G++ R     G   + L        +  +  A+        A + D 
Sbjct: 120 YLLLSSLQDPGNVGTILRTAAAFGTDGVILSADCPDLYAPKVLRASMGGVFRARACVSDD 179

Query: 66  LDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEEL 125
           L  ++A          R+  +P     P E  +     + +   A+V G E  G+  E  
Sbjct: 180 LSASIAAL--------RAAGVPVWAAMPAEGSVSLRDISLHGGGAVVVGNEGGGIAPELA 231

Query: 126 QKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRM 158
             C   + I   P   SLN AMA  VI +E+  
Sbjct: 232 ALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264


>UniRef50_A1S6F2 Putative RNA methyltransferase n=2 Tax=Shewanella
           RepID=A1S6F2_SHEAM
          Length = 225

 Score =  143 bits (361), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 14/218 (6%)

Query: 25  MKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSR 84
           MKTMG T L L+      + +A  +A GA+D++ NA ++D+ D+  A   L++ T+AR R
Sbjct: 22  MKTMGFTQLILIGSQPHLEDEARWVAHGATDILDNARVLDSFDDLRAEFDLLIATTARER 81

Query: 85  TLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLN 144
             P   L+P E  +      A   +ALVFGRE  GL+N+EL +C     +    +Y SLN
Sbjct: 82  GSPRTFLNPEELAITLGQSGA-QSMALVFGRESSGLSNQELSQCDLFSYVPLAGDYPSLN 140

Query: 145 LAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENH 204
           L  AV V  Y +           E+    +T       ++       +     G   ++ 
Sbjct: 141 LGQAVMVYTYALS--------GVERTIGLQTRDADERQIQSLKHKANELANQLGLSEQDK 192

Query: 205 PGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKG 242
                  L+    R     ++  +   +++ I  +  G
Sbjct: 193 LRPW---LQDSIGR--LSERDCKLAHQLISDIMSKING 225


>UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria
           RepID=Q11C30_MESSB
          Length = 286

 Score =  143 bits (361), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-QAIALAAGASDVIGNAH 61
           +++ + L      GN+G++ R +  +G   + LV     P S + +    G+   +    
Sbjct: 129 EDLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETVRATMGSVFSVP--- 185

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANT-PVALVFGRERVGL 120
                   LA        + R       +    +  +       +  PV L+ G E+ GL
Sbjct: 186 --------LARADEAAFLAWREHFAGLMVGTHLKGSVDYRNVDYSGGPVLLLMGNEQQGL 237

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGE 168
            ++  + C   V I       SLNLA+A  V+ YE+R   L       
Sbjct: 238 PDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRRTALPASHGTP 285


>UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3
           Tax=Caulobacteraceae RepID=C5SHP3_9CAUL
          Length = 322

 Score =  143 bits (361), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 2/152 (1%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAI-ALAAGASDVIGNAHIV 63
           + ++L + +   N+G++ R     G   L + +         +   AAGA D +  A + 
Sbjct: 166 VLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARVT 225

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L  AL   +     S          L             +   + +V G E  GL   
Sbjct: 226 N-LSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRL 284

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYE 155
             + C + V I     + SLN++ A  +  YE
Sbjct: 285 VAEHCDHLVKIPMPGGFESLNVSHATSIALYE 316


>UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME
          Length = 297

 Score =  142 bits (360), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDV---IGN 59
            ++ + L      GN+G+V R    +G   + L+     P S     A   S     +  
Sbjct: 142 NDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDTTDPYSLETVRATMGSVFSVPLYR 201

Query: 60  AHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVG 119
           A   D L+       LVVGT  +       +              AN PV L+ G E+ G
Sbjct: 202 ASEADFLNWRKGFSGLVVGTHLKGAVDYRTI------------PYANKPVILIMGNEQQG 249

Query: 120 LTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENG 167
           L +     C     I       SLNLA+A  V+ YE+R   L   E G
Sbjct: 250 LPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRREALTLDERG 297


>UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae
           RepID=C5CF29_KOSOT
          Length = 250

 Score =  142 bits (360), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAHIV 63
           + ++L       N+G++ R+    G   + +     V+     + ++ G    I    +V
Sbjct: 97  LLVLLDRIQDPHNLGAIIRSSVAAGADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVV 156

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +   T++            +                G    + +     AL+FG E  G+
Sbjct: 157 NMARTIETLKEEGFWTYAATM--------------EGEPYYSVSFTDKAALIFGNEGKGI 202

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
            +   +K  Y V+I       SLN+A +  ++ +E R  W
Sbjct: 203 RHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRRQW 242


>UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32
           Tax=Proteobacteria RepID=RLMB_VIBVY
          Length = 247

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
             + ++L   +   N+G+  R     G+  + +      P  +    +A GA++ +    
Sbjct: 95  SPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVR 154

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           + +   T+         +VGT+              E             +A+V G E  
Sbjct: 155 VTNLARTMRHLQEQGIWIVGTAG-------------EATHDIYQAKLTGSLAIVMGAEGD 201

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164
           G+     + C   + I      SSLN+++A  +  +E     LA+Q
Sbjct: 202 GMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQRLASQ 247


>UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae
           RepID=A7HLT3_FERNB
          Length = 234

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 18/165 (10%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNP-LVKPDSQAIALAAGASDVIGNAH 61
               ++L +     N+G++ R     G+  + L           +I  +AG    I    
Sbjct: 84  NPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPIVI 143

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
            V+    +++       + G   R              G          P+ +VFG E  
Sbjct: 144 TVNLARYIEKLKDKGVWIYGADMR--------------GKPLWEVKLERPLGIVFGNEGS 189

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           G+     + C   V+I       SLN++++  ++ YEV    +  
Sbjct: 190 GIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRREMGG 234


>UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7
           Tax=Coriobacteriaceae RepID=C8W818_ATOPD
          Length = 338

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 17/163 (10%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVK-PDSQAIALAAGASDVIGNAHIV 63
           + +VL   +  GN G++ R+ + +G   + + N         A   +AGA   +  A + 
Sbjct: 189 LVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVS 248

Query: 64  D---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
           +    L+E  A      G++                            +ALV G E  G+
Sbjct: 249 NLPRALEELKAAGFWTCGST-------------EHATQSVWEAPMGGRLALVMGSEGSGI 295

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
           +   L+KC +   +    +  SLN+A A  V+ YE        
Sbjct: 296 SRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLRRTQEA 338


>UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus
           RepID=Q7MBB6_GLOVI
          Length = 338

 Score =  142 bits (358), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 11/163 (6%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
             + +         N+G++ R+ +  G   + L     V   +    +AAGA + +  A 
Sbjct: 182 DPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIAR 241

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           + + L++A+                   +    +          + P+ +V G E  G++
Sbjct: 242 VTN-LNQAIERL---------KEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGIS 291

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQ 164
               + C + V+I    + +SLN ++A  ++ YEV     A Q
Sbjct: 292 LLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQ 334


>UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5
          Length = 270

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-DSQAIALAAGASDVIGNAH 61
            ++ + L       N+G++ R+    G+  + L      P  + A+  +AGA++ I  A 
Sbjct: 97  PHLLLALDGVEDPQNLGALLRSADGAGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIAR 156

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
           +V+    L++        VG   R               +   A    TP  +V GRE  
Sbjct: 157 VVNLVRALEQLKEQNIWCVGLDER-------------GTMSYDAYDWTTPSVVVLGREGE 203

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVE 171
           GL +   + C + V I      SSLN++ A  V+ YE        +     + 
Sbjct: 204 GLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEAARQRRVGKPETAPLP 256


>UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1
           Tax=Erysipelothrix rhusiopathiae ATCC 19414
           RepID=C8P2I4_ERYRH
          Length = 236

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 16/162 (9%)

Query: 3   QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAH 61
            N+ ++  +     N+G++ R     G+  + +     V   S    ++ GA + +  A 
Sbjct: 86  NNLIVLCDQLEDPHNLGAILRTCDACGVDGVVVGKHRSVGLTSTVAKVSTGAINTVKVAE 145

Query: 62  IVD---TLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERV 118
             +    + E       VV              +     +       + P+ LV G E  
Sbjct: 146 ATNMVKAIAELKEAGYWVV------------AAENAVDAVDYTEFNVDMPLVLVVGSEGK 193

Query: 119 GLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW 160
           G++    ++C     I      +SLN+++A  V+ +++    
Sbjct: 194 GISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRR 235


>UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter
           woesei DSM 14684 RepID=UPI0001C31319
          Length = 256

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 12/159 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL-VKPDSQAIALAAGASDVIGNAHIV 63
           + + L E     N+G++AR  +  G T L +               +AGA + +  A   
Sbjct: 108 LIVALDEIQDPQNLGAIARTAECAGATGLVIPARRSADVTPAVCKASAGAVEHLPIAR-A 166

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTP-VALVFGRERVGLTN 122
             L + L     V           W      + G+       + P V LV G E  GL  
Sbjct: 167 RNLADFLGDARGV---------GAWVYGAEGDGGVPYTGVDYSGPGVVLVLGSEGRGLRP 217

Query: 123 EELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
                C   +A+       SLN++ A   + YE+     
Sbjct: 218 RVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQRG 256


>UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0Z9E4_BREBN
          Length = 271

 Score =  141 bits (356), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALA-AGASDVIGNAH-- 61
           + + L E    GN+G++ R  +   +  + L +  V   +  +  A  GA   I      
Sbjct: 124 LLLFLDEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMGALFRIPVFTQS 183

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLT 121
           +VDT DE  A    V+            +    +  +           ALV G E  G++
Sbjct: 184 LVDTADEWKAKGGRVL------------ISSLEQNSVSYDEADYAGLTALVIGNEGRGVS 231

Query: 122 NEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWL 161
            E   K    V I       SLN A+A  +  YE +    
Sbjct: 232 KEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKRR 271


>UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus
           profundus DSM 5631 RepID=D2REE3_ARCPR
          Length = 232

 Score =  141 bits (356), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 5   IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLV-KPDSQAIALAAGASDVIGNAHIV 63
             + L       NMG++ R+ +  G   + +      + +     ++AGA   +  A + 
Sbjct: 84  FILFLDSVEDPQNMGAIMRSAEFFGCAGVVIPKRRCVQVNETVAKVSAGAVFHLDIARV- 142

Query: 64  DTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNE 123
           + L   L           + +     ++     G        + P+A+V G E  GL+  
Sbjct: 143 ENLANILK----------KLKKFGITVVGADLDGEPLRNVDLSPPLAIVVGGEDKGLSKP 192

Query: 124 ELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLAT 163
             ++C +   I    + +SLNL++A  +I YE R      
Sbjct: 193 VKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRRLHEG 232


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.314    0.175    0.522 

Lambda     K      H
   0.267   0.0539    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,835,418,338
Number of Sequences: 3077464
Number of extensions: 92905281
Number of successful extensions: 278648
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 1949
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 272570
Number of HSP's gapped (non-prelim): 2710
length of query: 246
length of database: 1,040,396,356
effective HSP length: 125
effective length of query: 121
effective length of database: 655,713,356
effective search space: 79341316076
effective search space used: 79341316076
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 92 (39.7 bits)
