Phyre 2 alignment of P14900 with c2q1uA_

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Job Description | P14900
Confidence | 95.61% | Date | Thu Jan 5 11:34:07 GMT 2012
Rank | 414 | Aligned Residues | 75
% Identity | 15% | Template | c2q1uA_
PDB info | PDB header:sugar binding protein | Chain: A: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; | PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmf in2 complex with nad+ and udp
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . |  | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | 60 | . | . | . | . | . | . | . | . | . | 70 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | A | D | Y | Q | G | K | N | V | V | I | I | G | L | . | G | L | T | G | L | S | C | V | D | F | F | L | A | R | G | V | T | P | R | V | M | D | T | R | M | T | P | P | G | L | D | K | L | P | E | A | V | E | R | H | T | G | S | L | N | . | . | . | . | . | . | . | D | E | W | L | M | A | A | D | L | I | V | A | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | S | K | L | A | N | T | N | V | M | V | V | G | G | A | G | F | V | G | S | N | L | V | K | R | L | L | E | L | G | V | N | Q | V | H | V | V | D | N | L | L | S | A | E | K | I | N | V | P | D | H | P | A | V | R | F | S | E | T | S | I | T | D | D | A | L | L | A | S | L | Q | D | E | Y | D | Y | V | F | H | L
Template Known Secondary structure |  | G | G | G | G | T | T |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  |  |  |  |  | S | S |  |  | G | G | G | S |  |  |  | T | T |  |  |  |  |  | S |  | T | T |  |  |  |  |  |  |  |  |  | S |  |  | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | .
|  | 73 | . | .
Predicted Secondary structure |  |  |  |
Query SS confidence |  |  |  |
Query Sequence |  | P | G | I
Query Conservation |  |  |  |
Alig confidence |  |  |  |
Template Conservation |  |  |  |
Template Sequence |  | A | T | Y
Template Known Secondary structure |  |  |  |
Template Predicted Secondary structure |  |  |  |
Template SS confidence |  |  |  |
|  | 87 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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