BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (552 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobac... 1126 0.0 UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadacea... 462 e-128 UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate h... 430 e-119 UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the O... 429 e-118 UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Ga... 416 e-115 UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrion... 412 e-113 UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family pro... 396 e-108 UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8... 374 e-102 UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillu... 341 4e-92 UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwards... 260 1e-67 UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1... 259 2e-67 UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synecho... 218 4e-55 UniRef50_D2U0I2 Putative uncharacterized protein n=1 Tax=Arsenop... 160 1e-37 UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candida... 159 3e-37 UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio ... 144 7e-33 UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acineto... 92 5e-17 UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escheri... 78 1e-12 UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea... 76 3e-12 UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-lik... 76 4e-12 UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms Re... 73 3e-11 UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD ... 72 7e-11 UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepI... 69 4e-10 UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bactero... 68 8e-10 UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafiel... 67 2e-09 UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1... 67 2e-09 UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1... 65 6e-09 UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteob... 65 8e-09 UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldi... 63 3e-08 UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobi... 63 3e-08 UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alk... 62 7e-08 UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiel... 61 9e-08 UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepI... 61 1e-07 UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicu... 61 1e-07 UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-lik... 58 1e-06 UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterob... 56 4e-06 UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacte... 56 5e-06 UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostri... 55 5e-06 UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteri... 55 7e-06 UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax... 55 8e-06 UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryante... 54 2e-05 UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fi... 54 2e-05 UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteob... 53 3e-05 UniRef50_Q1ZEF5 NADH-ubiquinone oxidoreductase (Fragment) n=2 Ta... 53 3e-05 UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-lik... 53 4e-05 UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepI... 52 5e-05 UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxy... 51 1e-04 UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-lik... 50 2e-04 UniRef50_B0VJ98 Putative uncharacterized protein n=1 Tax=Candida... 50 2e-04 UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM... 50 2e-04 UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Cl... 50 2e-04 UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1... 50 3e-04 UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methano... 50 3e-04 UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 T... 49 4e-04 UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralston... 49 4e-04 UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clo... 49 6e-04 UniRef50_C3WB54 ATP-dependent OLD family endonuclease n=3 Tax=Fu... 49 6e-04 UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family... 48 0.001 UniRef50_B6R3J1 Putative uncharacterized protein n=1 Tax=Pseudov... 48 0.001 UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobilun... 47 0.001 UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropher... 47 0.002 UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteo... 47 0.002 UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaprot... 47 0.002 UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Ta... 47 0.002 UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bactero... 46 0.003 UniRef50_A9F4E6 Putative uncharacterized protein n=1 Tax=Sorangi... 46 0.003 UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Strepto... 46 0.003 UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptoc... 46 0.004 UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candida... 46 0.004 UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) fami... 46 0.005 UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillu... 45 0.008 UniRef50_C7Q7F6 SMC domain protein n=1 Tax=Catenulispora acidiph... 45 0.008 UniRef50_B1YCD1 SMC domain protein n=3 Tax=Thermoproteaceae RepI... 45 0.010 UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algorip... 45 0.011 UniRef50_Q15Q84 Putative uncharacterized protein n=1 Tax=Pseudoa... 44 0.012 UniRef50_A0ZET6 ATP binding protein n=1 Tax=Nodularia spumigena ... 44 0.015 UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanoc... 44 0.016 UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ec... 44 0.018 UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paeniba... 44 0.020 UniRef50_D0TBU9 Putative uncharacterized protein (Fragment) n=1 ... 43 0.026 UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family... 43 0.031 UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria ... 43 0.038 UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphapr... 43 0.039 UniRef50_UPI0001BC5B9C SMC domain protein n=1 Tax=Fusobacterium ... 42 0.047 UniRef50_UPI0000F51745 hypothetical protein Faci_09883 n=1 Tax=F... 42 0.084 >UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobacteriaceae RepID=YBJD_ECOLI Length = 552 Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF Sbjct: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE Sbjct: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE Sbjct: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE Sbjct: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH Sbjct: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 Query: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED Sbjct: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK Sbjct: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 Query: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ Sbjct: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 Query: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF Sbjct: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 Query: 541 SRVLWLARGRAD 552 SRVLWLARGRAD Sbjct: 541 SRVLWLARGRAD 552 >UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadaceae RepID=A0KKW1_AERHH Length = 545 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 250/552 (45%), Positives = 348/552 (63%), Gaps = 8/552 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+ GFRGINRLSL L+ VLIGENAWGKSSLL AL LL +++ Y F DDF Sbjct: 1 MFLERIEVKGFRGINRLSLGLDNTTVLIGENAWGKSSLLRALWCLLGQDAEPYQFSSDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRH-RVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 P HL ++LTF E P RR L A W D +HRI YR E Sbjct: 61 HQPEDPELEPARHLQLVLTFSEHRPQMCLHSRRLARLGAAWVKHKDKFHRIHYRASAELQ 120 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG+V T FLD G + ++D ++ L+ + PV RLRDAR R NG V + Sbjct: 121 SDGTVTTTHDFLDGIGKSLPIDDAHELVCLLITMNPVFRLRDARTAR---NG-VETLQWG 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 +++ +L LA +L PQ + + ++++ L A+ QL++HYF+ + + R +R N Sbjct: 177 DLSEHRLSELADKLIDEPQRIGEPELKEALQAVRQLMDHYFNALAPIKNKPR-SQREIVN 235 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + R + ++ R+ ++ + G+ ATLLQA+G L++ ARP++++EDPE+RL Sbjct: 236 RPMTLRNPGNLQALLRNADNRALQLAMAGMAATLLQARGNRELEQGARPIMILEDPESRL 295 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP ML++AW LL LP Q++ TTNSG+LLS P+ + RLVR + +LG S++ Sbjct: 296 HPTMLALAWGLLEQLPGQKLLTTNSGDLLSSLPLNQIRRLVRRQQDIVCHQLGGERYSSD 355 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D R+I+FH+R NRP S+FARCWLLVEGETE W+++ELA+ CG+ AEG+++IEFAQ G Sbjct: 356 DLRKIAFHVRINRPMSMFARCWLLVEGETEIWLLSELAQICGYSLRAEGVRIIEFAQCGQ 415 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 PL+K AR GIEWH+L DGDEAG KYA + RSLL +R ER+ LT LPA D+EH++Y Sbjct: 416 SPLIKVARDFGIEWHLLTDGDEAGVKYATSARSLLKGER--ERDRLTQLPAADIEHYLYH 473 Query: 480 QGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 GF VF R A + +N +II+KAIH SKP +A+ V EA R G + +P +L++M Sbjct: 474 NGFEAVFRREAGVGGRSTLNAGRIINKAIHHRSKPGMALAVVEEAERLGGEHIPPVLRQM 533 Query: 540 FSRVLWLARGRA 551 F+RV+ LARG+ Sbjct: 534 FARVVALARGQG 545 >UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate hydrolase domain n=8 Tax=Vibrionaceae RepID=Q5E0I1_VIBF1 Length = 544 Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/559 (41%), Positives = 344/559 (61%), Gaps = 23/559 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 1 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFTLKDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEGESA 119 ++ H+ II+T++ + H+ RYR L + W RI+YR+ + Sbjct: 61 HQDHSISYTQDQHIQIIITWQTTEKNEHKAGRYRKLSSLWQHDANSNTQRIYYRVSA-TN 119 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN-VPN 178 DG + + SFLDKDG+ + I L++L PV+R+RD+R R+ G + VP+ Sbjct: 120 NDGKITSSSSFLDKDGNVLRYHRIECLVYELIKLHPVIRIRDSR---RLSPGPFTDHVPD 176 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 + R+++ R L + P +S G+I+ L +M L++HYFS +R RR Sbjct: 177 DRI-ERRINNTCRRLLTAPGQVSSGEIKSALQSMQSLVDHYFS--------FRNHRRHGQ 227 Query: 239 NEQRSWRYLD------IINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 ++ R + +N+ +++ + +++LLGL T L+AKG L + ARP++++ Sbjct: 228 HKVRDDLFFGQKAEGVSLNQFVNQNQSKQTKLLLLGLLNTYLRAKGPNTLKQSARPVMIV 287 Query: 293 EDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG 352 EDPE RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES +++ L Sbjct: 288 EDPEGRLHPTQLIQAWTLLNHIPMQKILTTNSSELLSAVPLSSIRRLVRESDSTSSYALT 347 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVI 412 P+ LS +D RRI+FHIRF R ++LFARCWLLVEGETE W+ NE+AR G++ AEG+++I Sbjct: 348 PTSLSRDDLRRITFHIRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGVQII 407 Query: 413 EFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 EFAQSGLK L+K A+ + IEWHV+ DGD AGKKYA V++ L N E ER LT LP D Sbjct: 408 EFAQSGLKSLIKMAKALHIEWHVVTDGDPAGKKYAFAVKNQLEN--EHERHRLTELPHKD 465 Query: 473 MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSV 532 +EH++Y GF ++F ++ I + P+ +KII K + + +KPD+A+ + G +S+ Sbjct: 466 IEHYLYHHGFEELFRTLSNISADQPVPPKKIIVKTLKKYAKPDVALAIVEHCEEMGPESI 525 Query: 533 PTLLKKMFSRVLWLARGRA 551 P LL+ R + +A+G+ Sbjct: 526 PLLLRWTLKRTVTMAKGQG 544 >UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the OLD family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F9_LISDA Length = 566 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 229/571 (40%), Positives = 348/571 (60%), Gaps = 29/571 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ +VLIGENAWGKSSLLDAL++ LSP++ Y+F+ DF Sbjct: 1 MHLERIEISGFRGIKRLSLTFDELSVLIGENAWGKSSLLDALSIALSPDAQFYNFKFSDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 N + L IIL ++E G H RRY+ E W + H ++Y++E E Sbjct: 61 HVDYTLGNKKMTQLQIILHWKEDAEGEHIARRYKGFERFWVLKHNIRH-LYYQIES-VIE 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP------ 174 + V+T R FL+ G I ++ + + + L PV+RLRDAR +R + P Sbjct: 119 NDKVITYRRFLNHHGREIHCDENDRMIKRWMVLHPVVRLRDARRLRYYDDENKPLHDSND 178 Query: 175 ----------------NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 N ++LD R L + P +++ G+++ + A+ L++H Sbjct: 179 HEQLQTNGHSDNHVNGNAQQEARIQKRLDNTCRRLMTQPGHVNSGELKSSIKALHSLVDH 238 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 YF+ A R R R A + ++I + + +++LLGL ++A+G Sbjct: 239 YFA--FAPHQRQRNFNR-AHFPSFAQYAEHPFEQLIPKNLSKQNQLVLLGLLNAFIRARG 295 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 + L + +RP+L++EDPE RLHP +L AW ++ +P+Q+I TTNS ELLS P++ + + Sbjct: 296 PVSLKRLSRPILIVEDPEGRLHPTILQQAWSFISSMPMQKILTTNSPELLSSVPLQSIKK 355 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L+R++ R + +G L +++RR+SFH+R +RPS+LFAR WLLVEGETE W+ NELAR Sbjct: 356 LIRQADRTQVFEVGKRTLGKDETRRVSFHVRLHRPSALFARAWLLVEGETEVWLFNELAR 415 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDR 458 CG++ AEG+++IEFAQSGL+PLVK AR +GIEWH++ DGD AG+KYA TVR++L D Sbjct: 416 YCGYNLAAEGVQIIEFAQSGLRPLVKIARSLGIEWHLISDGDMAGRKYAETVRNMLGTD- 474 Query: 459 EAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAI 518 AER LT LP D+EH++Y QG+ +F +++ I + P+N KII +A+ R +KPD+A+ Sbjct: 475 -AERHRLTVLPDRDIEHYLYNQGYEALFKQLSGIQGDAPINAHKIIQRALKRHAKPDVAL 533 Query: 519 EVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 + VD VP L++ + R++ ++RG Sbjct: 534 AIVEYTHEGKVDEVPLLIRWLLKRIVAMSRG 564 >UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Gammaproteobacteria RepID=B7VSG7_VIBSL Length = 590 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 342/598 (57%), Gaps = 59/598 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI R+SL ++ LIGEN WGKSSLLDAL+++L + YHFE DF Sbjct: 1 MQLERIEISGFRGIKRMSLAFDELTTLIGENTWGKSSLLDALSVVLPSDGVPYHFEMTDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + HL I+L + + RYR L+ W G RI+YR+ + E Sbjct: 61 HVDYSVSHPQSQHLQIVLALKANDKSELNAGRYRKLKPVWVQDEFGVFRIYYRISA-TLE 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN----V 176 T +FL DG+P+ + ++ L+ L PV+RLRDAR R NG N + Sbjct: 120 QYETTTHYAFLGLDGNPLKLHHSEKLSQELMTLHPVIRLRDARHFDRPFNGNSLNHNAHL 179 Query: 177 P-NVEVTA---------------------------------------RQLDFLARELSSH 196 P NV +++D R L + Sbjct: 180 PGNVHTNTVHASNGHANNVSGNGNGQSQTTNGNGSNGNGNGRQARIEKRIDNTCRRLMAI 239 Query: 197 PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR-----LMRRRASNEQRSWRYLDIIN 251 P +++ G++R L +M L+EHYFS + + R L+ +N++ I+ Sbjct: 240 PGHVNKGEMRSSLESMQSLIEHYFSFKSVSRKNPRKPRDGLLYSAGANDKS-------IH 292 Query: 252 RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL 311 ++++ + R++ +GL LQAKG L + ARPLL++EDPE RLHP L+ AW L+ Sbjct: 293 QLVEETKNKQTRLLFMGLLNAYLQAKGPNDLRRCARPLLILEDPEGRLHPTHLARAWSLM 352 Query: 312 NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFN 371 LP+Q+I TTNSG+LL+ P++ + RLVR+S + A +L + S ++ RRI FHIRF+ Sbjct: 353 QKLPMQKILTTNSGDLLAAVPLQSIRRLVRQSDKTIANQLNVNHFSKDELRRIGFHIRFH 412 Query: 372 RPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGI 431 R +L+ARCWLLVEGETE W+ NELA QCG++ AEG+++IEFAQSGLK L+K A+ GI Sbjct: 413 RSGALYARCWLLVEGETEVWLFNELANQCGYNLAAEGVQIIEFAQSGLKALIKVAQEFGI 472 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 +WHV+ DGD AGKKYAATV S L ND+ ER LT LP D+EH++Y GF + F M + Sbjct: 473 DWHVVTDGDAAGKKYAATVLSKLGNDQ--ERHRLTELPDRDIEHYLYMNGFENFFRDMVK 530 Query: 492 IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 IP + P+ +K+++K + + +KPDLA+ + +G D +P LL+ RV+ +A G Sbjct: 531 IPYDHPIPAKKVVAKVLKKHAKPDLALAIVSHCENQGQDCIPLLLRWTLKRVITMANG 588 >UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=B6ER73_ALISL Length = 554 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/554 (42%), Positives = 340/554 (61%), Gaps = 13/554 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 11 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFSLTDF 70 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY-HRIFYRLEGESA 119 ++ H+ II+TF+ + +R RYR L + W P + + RI+YR+ + Sbjct: 71 HQDHSISYTQDQHIQIIITFQTTEKNEYRAGRYRKLASLWQPDENSHAQRIYYRISA-TN 129 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + SFLD G + I+ L+RL PV+R+RDAR R +G +P+ Sbjct: 130 NDGKITASHSFLDNKGRILRYHKIHMLVYELIRLHPVIRIRDAR--RLHPDGDTAPLPDD 187 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + R+++ R L + P +S G+I+ L +M L+EHYF A + R + R + Sbjct: 188 RI-ERRINNTCRRLLTSPGQVSSGEIKSALHSMQALVEHYF----AFKNHNRHTQHRIHD 242 Query: 240 EQRSWRYLDIIN--RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + + + I+ + I++ + +++LLGL T L+AKG L ARPL+++EDPE Sbjct: 243 DLFFGQKTEGISLTQFINQNKSKQTKLLLLGLLNTYLRAKGPNVLKPSARPLMIVEDPEG 302 Query: 298 RLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES + + + P+ LS Sbjct: 303 RLHPTQLIQAWTLLNHIPMQKILTTNSSELLSTVPLCSIRRLVRESDSTSCYSVSPTCLS 362 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 +D RRI+FH+RF R ++LFARCWLLVEGETE W+ NE+AR G++ AEGI++IEFAQS Sbjct: 363 KDDLRRITFHVRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGIQIIEFAQS 422 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GLK L+K A+ + IEWHV+ DGD AGKKYA V+S L+N E +R LT LP D+EH++ Sbjct: 423 GLKSLIKIAKTLHIEWHVVTDGDPAGKKYAFAVKSQLDN--EHQRHRLTELPHKDIEHYL 480 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 Y GF +F ++ + P+ +KII K + + +KPDLA+ + G +S+P LL+ Sbjct: 481 YHHGFEPLFRELSNTSVDQPVPPKKIIIKTLKKYAKPDLALAIVQYCEDNGPESIPLLLR 540 Query: 538 KMFSRVLWLARGRA 551 R L +A+G+ Sbjct: 541 WTLKRTLTMAKGQG 554 >UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family protein n=2 Tax=Psychromonas RepID=A1SRF4_PSYIN Length = 558 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 216/567 (38%), Positives = 325/567 (57%), Gaps = 26/567 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+L+++E+VGFRGINRLS+ ++ + +GEN+WGKSSL DAL+L LS Y F DDF Sbjct: 1 MLLDQIEVVGFRGINRLSINVKSLSAFLGENSWGKSSLFDALSLFLSGTKKAYKFTGDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P +H++ TF+E G R+Y+ + A W I+Y+++G E Sbjct: 61 HRPSISDVSCNKLIHLVFTFKEQANGESLQRQYKSISAAWNLPKGECSYIYYQVDGSITE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVED--INDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 G+++T R FLD G + + + + +P LR+ R + T + + Sbjct: 121 SGNIITQRYFLDNHGQKKSFKKDVLANLVNEFISFVPALRMGSERSLMV----TAEDTGD 176 Query: 179 VEVTARQLDFLAR------ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 VE +++ AR L+ Q LS+ +++ G A+V L +HY + R Sbjct: 177 VEYCSKRASCEARIKRIFKRLNKSSQQLSESEMKMGYQALVYLFDHYLLKH---YGRSHF 233 Query: 233 MRRRASNEQR-----SWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 R A N+ + S++ L N ++ + G +S R +LL + L+ +G L + A Sbjct: 234 HRGDAQNDTKGQMPFSFQALTHFNDLL-KTGHKSDRAMLLLVLGEFLEVRGEHLLRRGAT 292 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 P+LL+E+PE LHP+ L++ W +LLP+Q++ +TNS +LLS P+ V RLVR + Sbjct: 293 PILLLEEPENNLHPVNLAITWRFFSLLPMQKLVSTNSSQLLSFLPLSCVQRLVRCTGLTQ 352 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 ++ L S D RR++FHIR RP SLFAR WLLVEGETETW++ EL+R CG++ E Sbjct: 353 SYSLNLKHFSQNDLRRVAFHIRMTRPQSLFARSWLLVEGETETWLLTELSRLCGYNLVVE 412 Query: 408 GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS-LLNNDREAEREHLT 466 G++++EFAQ G+ PL+K A+ + IEW VL DGD AG+KYAA V LL D R L Sbjct: 413 GVQILEFAQCGVAPLIKLAQDLHIEWFVLTDGDAAGQKYAARVAEMLLVKDSLVNR--LV 470 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQIPEN--VPMNLRKIISKAIHRSSKPDLAIEVAMEA 524 LPALD+EH + GF++V+ A E + KII KA+H+ SKP+L + +A Sbjct: 471 VLPALDIEHLFFDHGFANVYLEAAHYTEKDLARITTHKIIDKAVHKYSKPELGLAIANAV 530 Query: 525 GRRGVDSVPTLLKKMFSRVLWLARGRA 551 RG DS+P LLK++FSR++ LAR ++ Sbjct: 531 EERGTDSIPPLLKRLFSRLVGLARSQS 557 >UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8 Tax=Pasteurellaceae RepID=A6VPB5_ACTSZ Length = 519 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 232/564 (41%), Positives = 332/564 (58%), Gaps = 59/564 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + ++VGFRGINRLS+ L + VLIGENAWGKSSLL AL+L+L+ ++ LY F ++DF Sbjct: 1 MYLRQCDLVGFRGINRLSIHLRPHMVLIGENAWGKSSLLAALSLILNNKNRLYRFTQEDF 60 Query: 61 WFPPGDINGREHH------LHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 HH + ++ TF E + + +A + P DGY RI+ R+ Sbjct: 61 -----------HHEESTPAIMLLFTFSERDIKEDMDDKNQSFQAVFVPHDDGYDRIYLRV 109 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP 174 EGE ++ V+T SFLD+ G PI +E+ + A L+ P+ R RDAR Sbjct: 110 EGEMRQN-DVITTYSFLDELGEPICLENTEEVALSLICRHPIYRFRDARL---------- 158 Query: 175 NVPNVEVTARQLDFLARELSSHPQNL---SDGQIRQGLSAMVQLLEHYF--SEQGAGQAR 229 + D L +PQN+ + RQ A+ +L+HYF S + A+ Sbjct: 159 --------NSEQDLL------NPQNMRAKYKSEDRQ-FQAVGLVLQHYFMSSRRNDVLAQ 203 Query: 230 YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPL 289 L+ A W L ++ + + + R R L+ TL + +R K RP+ Sbjct: 204 KMLLEPTAL-----WDELKLLCQRLKQDETRELRTRLVEFLQTLFISDAPVRTSKYHRPV 258 Query: 290 LLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW 349 LL EDPE RLHP M+++ W L+ LP+QRI TTNS EL+S ++ +CRLVR + R ++ Sbjct: 259 LLFEDPEARLHPRMIAILWELMQYLPIQRITTTNSVELVSQAELKDICRLVRYTDRTLSY 318 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 +L L ED RR++FHI NR +LF+R W+LVEGETE W++ ELA+ + EGI Sbjct: 319 QLFRRELGKEDLRRLTFHIHHNRSLALFSRTWILVEGETEVWILAELAKLLDINLSMEGI 378 Query: 410 KVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALP 469 +++EFAQSGL+PL+K+A+ MGIEW+VL DGDEAG+KY+ T +LL + E + +T LP Sbjct: 379 RIVEFAQSGLRPLIKYAKAMGIEWYVLTDGDEAGRKYSETAHNLL-EEHEMSSQRITTLP 437 Query: 470 ALDMEHFMYRQGFSDVFHRMAQIPEN---VPMNLRKIISKAIHRSSKPDLAIEVAMEAGR 526 LD+EHF Y +GF +VF R+A+ +PM RKII +AI R+SKPDLAI ++ E R Sbjct: 438 KLDIEHFFYTEGFENVFIRLARWERQGRYLPM--RKIIQRAIQRTSKPDLAIALSAEMER 495 Query: 527 RGVDSVPTLLKKMFSRVLWLARGR 550 RG S+P L K++FS+VL L R + Sbjct: 496 RGTQSIPLLFKRLFSKVLNLTRTQ 519 >UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillus minor RepID=C5S1H4_9PAST Length = 519 Score = 341 bits (875), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 209/550 (38%), Positives = 295/550 (53%), Gaps = 36/550 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ VEI GFRGIN L L L N VLIGEN WGKSSLL AL+ + S +LY F +DF Sbjct: 1 MYLKFVEIHGFRGINSLFLKLRPNMVLIGENTWGKSSLLGALSTIFSSSDELYQFTENDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 G + + + TF E HR +P + G H + + GE Sbjct: 61 HVEFGSQPKKHPQIRLRFTFCEERENEHREAELKPCRGLFINDDKGLHYLHLEVFGER-N 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 +G V T F ++ I E+ + R+L++ PV RLRDAR N ++ V Sbjct: 120 NGEVTTHYRFTNERHRVISCENEQEVIRYLIQRHPVYRLRDARL-----NKSINQV---- 170 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 +L+ P N SD Q L A+ L+++YF Q+R + N Sbjct: 171 -----------QLTPMPINASDQAFAQELDALALLMKYYFL---TAQSRKNALEAMQDNA 216 Query: 241 QRSWRYLDIINRMIDRPG-GRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + R+ P R L F +L P++L ED +T+L Sbjct: 217 FLWEKAKALCIRLQKEPHLAEKVREYLSAFFVR------DKKLANIGTPIILFEDLDTQL 270 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP M+++ W L++ L +QRI TTNS ELLS P++ +CRLVR A+++ L E Sbjct: 271 HPRMIAILWALISQLQIQRITTTNSMELLSHIPLKEICRLVRSPDHTHAYQIEGGMLGKE 330 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 + R+++FHI NR +LFA+ W+LVEGETE W++ E+A+ D EGI+++EFAQ GL Sbjct: 331 NLRKLTFHIHHNRGLALFAKTWILVEGETEVWILEEMAKLLNIDLDIEGIRIVEFAQCGL 390 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 +PL+K+A+ MGIEW+VL DGD+AG +YA TV+SL D A R LT LP D+EHF Y Sbjct: 391 RPLIKYAKSMGIEWYVLTDGDDAGLRYADTVQSL--EDNFANR--LTILPYRDIEHFFYH 446 Query: 480 QGFSDVFHRMAQ-IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 GF VF ++A+ P +II +A+H +SKPDLAI ++ E RG D +P L K+ Sbjct: 447 SGFKAVFLKLARWQPNGKFYPTSQIIKRAVHFTSKPDLAIALSKEMELRGEDKIPVLFKQ 506 Query: 539 MFSRVLWLAR 548 +F VL L + Sbjct: 507 LFENVLLLTQ 516 >UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BEA6_EDWI9 Length = 296 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 142/268 (52%), Positives = 177/268 (66%), Gaps = 8/268 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+VGFRGINR+SL L+ N VLIGENAWGKSSLLDALTL LSPE DLY F+ DF Sbjct: 1 MYLERIEVVGFRGINRISLSLDDNTVLIGENAWGKSSLLDALTLCLSPERDLYRFQPHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 +FPPGD REHHL I+ TF E G R RRY L W D RI++R EGE ++ Sbjct: 61 YFPPGDETAREHHLQIVFTFCEIERGHARARRYYRLSPLWQESGDRLQRIYFRQEGELSD 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP--NVPN 178 D +V T RSFL++ G + + ++ AR L+RL PVLRLRDARF+RR+ + ++P+ Sbjct: 121 DNTVCTWRSFLNEQGESLSLHHVDLLARELIRLHPVLRLRDARFIRRLHPSVLAARHLPD 180 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 A+QLD L REL +PQ LS+G++R GL AM QLLEHYFS G A RRR Sbjct: 181 QAQVAQQLDDLTRELVCNPQKLSNGELRAGLGAMQQLLEHYFSTNGDETAVG--ARRRHR 238 Query: 239 NE----QRSWRYLDIINRMIDRPGGRSY 262 NE +++WR L+ IN+MI G Y Sbjct: 239 NEIIHGRQAWRSLENINQMIAASGSPQY 266 >UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ67_ACIBL Length = 566 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 177/550 (32%), Positives = 274/550 (49%), Gaps = 12/550 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L V + FRGI R + ++ VLIGEN GKS +++AL L+L+ S + FE F Sbjct: 1 MQLHSVLVENFRGIRRAEVSFSRDTVLIGENDSGKSRVIEALCLVLNSSSGIIPFEPCHF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P + N + I +TF E G Y+P+++ P + + RLE +A Sbjct: 61 CVPVEEANQFSVPIRITITFAERHKGEWSSATYQPIQSLLAPESSRQREL--RLEVHAAS 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + +R F G + + + + P++RL + RNG V N ++ Sbjct: 119 ADAKPRIRFF--SSGGALAGSESPELLAWVRANNPIIRLEQGLLNQGGRNGPVRN-KEIQ 175 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL--LEHYFSEQGAGQARYRLMRRRAS 238 + +D L + + G A L L + A + + L S Sbjct: 176 SYSDLVDRHYAALVGGASTNATLDLEAGFKAAQTLVALSSQHLDANARRTNWLLEEIAGS 235 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + S R+ + + P G SY++ LL LL+A + DA P+++ EDPE Sbjct: 236 TLKLSSRFAN--DSTSAPPSGNSYKIGLLLFVGALLRAH-SQPFGPDAEPIVIFEDPEAH 292 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 LHP+ L+ W L+ + Q I +T+SG LL+ P+ + RL+R + + R+ L+ Sbjct: 293 LHPLTLASVWSLIERMRWQTIVSTHSGVLLTEAPLHSIRRLIRVNDEIIVHRVRDRALTK 352 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 D R+ +H+R R +++FARCWLLVEGETE W++ ELAR G++FDAEGI +EFAQ G Sbjct: 353 TDMRKFRYHVRSRRGAAMFARCWLLVEGETEFWLLPELARLLGYNFDAEGISCVEFAQCG 412 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 + PLVK AR +GIEWH+L DGD +G Y+AT + R +T L D+EH + Sbjct: 413 IPPLVKAARELGIEWHLLTDGDNSGAIYSATAGRFCGPNELPTR--ITRLREPDIEHCFW 470 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 G+++ ++A + N R II AI +SSKP LA+++ G VP LK+ Sbjct: 471 HSGYANAILKLAGRTSSSRPNPRWIIRAAIDKSSKPYLALQLLEAVASSGSAGVPPALKR 530 Query: 539 MFSRVLWLAR 548 + + +AR Sbjct: 531 VIESCVRMAR 540 >UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS5_9SYNE Length = 568 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 177/596 (29%), Positives = 270/596 (45%), Gaps = 77/596 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS--------PESDL 52 M L ++ I FRGI L + L VLIGEN GK+S+L+A+ LS P D Sbjct: 1 MQLTKIAIKNFRGIEELEIDLAPCTVLIGENNTGKTSILEAIYTCLSRNLARKVVPFGDY 60 Query: 53 -YHFER---DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 +H D PP ++N TF ES G + + + D Sbjct: 61 DFHLTAAMPDPSSSPPIELN---------FTFVESEEGEWPDAIVQAFDKAYQARADNRL 111 Query: 109 RIFYRLEGESAEDGSVMTLR-SFLDKDGHPIDVEDINDQARHLVRLMPVLRL---RDARF 164 I +R+ L +F D + + R L +L PV L RDA Sbjct: 112 EIRFRVVAAYDPASKDFFLDWTFRDLADNELTGAKSPQLVRELQQLNPVFFLAAVRDAGH 171 Query: 165 MRRIRN---GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL--EHY 219 + R+ G+ P ++ R ++ + + A+ Q++ H Sbjct: 172 HFQGRSQFWGSFTKNPQIDDATR------------------AELEEQIEAINQIILDSHT 213 Query: 220 -FSEQGAGQARYRLMRRRASNEQRS-----WRYLDIINRM-------------IDRPGGR 260 F E A+ + AS + S R D++N+ I + G Sbjct: 214 PFDEVKTQVAKTGRLVPLASTDLVSVEAIPARIFDMLNKTQVKLAARGGAKLPITQHGAG 273 Query: 261 SYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIA 320 + + +L LF L ++ D D+ PLL +E+PE+ LHP + W +L+ + Q+I Sbjct: 274 TQSLSVLFLFEAFLNSRLAEAYDPDSEPLLTLEEPESHLHPSAVRSLWQVLSGIRGQKII 333 Query: 321 TTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARC 380 T+SGEL++ P+ + RL R++ +V +++ LS +D R+I++H+R R + LFA+ Sbjct: 334 ATHSGELIAAVPLHSIRRLARKAGKVEVFQVNEGTLSPDDERKINYHVRAKRGNLLFAKS 393 Query: 381 WLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 WLLVEGE+E W + E AR + EG+ +EFAQ GL PL+K A +GIEWHV DGD Sbjct: 394 WLLVEGESEFWFLPEAARLLDLDLELEGVCCVEFAQCGLAPLIKLATELGIEWHVFADGD 453 Query: 441 EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPE------ 494 AG++YA R LL EA+R LT L D+EH M+ G+S V+ P+ Sbjct: 454 PAGQRYATVARGLLGATPEAQR--LTLLAEKDIEHAMWSHGYSAVYDSAVGAPQRANITA 511 Query: 495 --NVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 P + I AI +SKP LAIE A + G +P ++ + + AR Sbjct: 512 IPGTPDYTEQTIRMAISSTSKPHLAIEAVEAARQAGSPGLPAAIETAITTAVNNAR 567 >UniRef50_D2U0I2 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U0I2_9ENTR Length = 190 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 2/165 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L++VEI GFRGINRLSL L+ N VLIGEN WGKSSLLDALT+LLSP LY F + DF Sbjct: 1 MYLQQVEISGFRGINRLSLTLDHNTVLIGENTWGKSSLLDALTILLSPRQPLYQFNQHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + ++L IIL F E+ P H+V R++ L W D Y RI+YR+ E + Sbjct: 61 HHLVA-TDEQINNLQIILVFCENQPNNHKVSRFKHLLPLWIKGDDEYKRIYYRVSAEQ-Q 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 + V T R FLDK G+ + + D N + ++RL PVLRLRDARF+ Sbjct: 119 NNIVATERCFLDKQGNKLVLNDNNKYIQQIIRLYPVLRLRDARFL 163 >UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q554_9BACT Length = 574 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 150/586 (25%), Positives = 259/586 (44%), Gaps = 49/586 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY---HFER 57 M L ++I FRG+ L L L+ VLIGEN GKS++L+A+ L+L+ + F Sbjct: 1 MKLIEIKIENFRGVRSLHLPLDGLTVLIGENNTGKSTVLEAIRLVLTRGFGVRRGGQFTE 60 Query: 58 DDFWFPPGDINGRE-HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DF + + + I L F E + + T G + I+ + +G Sbjct: 61 YDFHLKDANATPQTADQISITLHFAEEQENEWPDAVIQQMSEVIQLGTTGLNHIWLQAKG 120 Query: 117 E-SAEDGSVMTLRSFLDKDGHPIDVEDIN--DQARHLVRLMPVLRLRDA--RFMRRIR-- 169 AE GS T +FL+ G + +++ + V L + LRDA F +R + Sbjct: 121 GYQAESGSFETKWAFLNSSGAELVLKNATPLNLISRFVPLFFLSALRDASQEFGQRGQFW 180 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 +G + ++ + +++ + RE+ N S GL+ + + + AG+ Sbjct: 181 SGFLKSIQLPDDQRERIEEMLREV-----NTSVIGANAGLTEVTKKIAD------AGRLV 229 Query: 230 YRLMRRRASNEQRSWRYLDIINRM-------------IDRPGGRSYRVILLGLFATLLQA 276 + E R D++ ++ + R G + + +L LF A Sbjct: 230 PLDLADPVVLEAIPTRVFDMVGKIQVHLKSSYGVKLPLHRHGEGTQSLAVLMLFQAFTSA 289 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHV 336 T ++ P+L +E+PE LHP + L + Q + +++SG+L+S PV + Sbjct: 290 NLTEAYYPESTPILALEEPEAHLHPSAIRSLGSFLEKMTGQILVSSHSGDLVSRVPVMAL 349 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 RL + + R+ + + + I + IR + LF+RCWLLVEGE++ ++ L Sbjct: 350 RRLYKHNGETKIGRMESGAFTGRELQAIDYSIRLAKGHYLFSRCWLLVEGESDYHLMPLL 409 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLK--PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 GH D V+E +Q K P +KFA+ +GI+W ++ DGD G+ Y + L Sbjct: 410 FEVMGHSQDQVSFSVLEISQVIDKGEPFIKFAKALGIQWFMMADGDSEGRGYNKRAKKYL 469 Query: 455 NNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM----------AQIPENVPMNLRKII 504 N E+ + L D+EH + G+SD M Q + + +I Sbjct: 470 ENG-ESLADRARTLTCADIEHEFWHSGYSDFMMNMVLPQTQSLIDTQAANDTAKKTKLLI 528 Query: 505 SKAIHRSS-KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 AI ++ KP A +A E +RG ++P +K + +RV+ LA G Sbjct: 529 KAAIKKAGEKPAFAQALAAEVRQRGAGTIPQTIKDIITRVVQLAGG 574 >UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio cholerae 623-39 RepID=A6AH64_VIBCH Length = 283 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 88/222 (39%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ LIGEN WGKSSLLDAL+++L + LY F DF Sbjct: 1 MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + +L IIL F S + RYR L+ W G +I YR+ + Sbjct: 61 HVDYSIADAQTQNLQIILVFAASDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTVPNVPNV 179 + T +FLD +G+ + + A+ L+ L PV+RL+D+ RF + + NG N N Sbjct: 121 -YDISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSRRFEKSLANG---NGKNA 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFS 221 V R + R L + P +++ G+IR LSAM L+EHYFS Sbjct: 177 RVEKR-ISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFS 217 >UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VB67_ACIBY Length = 597 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 119/464 (25%), Positives = 199/464 (42%), Gaps = 43/464 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L+ ++I FR + + L N VL+GEN GKS+L+ A+ L++ + Sbjct: 1 MHLKNLKIRNFRNFESIDIPLSDNIVLLGENRTGKSNLIFAMRLVIDQNLSDSARQLKLS 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPG-RHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DFW + +H+ T E+ P + YR P T IF R + E Sbjct: 61 DFWDGCDLFTKPQIEVHLDFTDFENDPDLTALLTDYR---LASDPHTVRLSYIF-RCKAE 116 Query: 118 ------SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRIRN 170 S+ED + G ++ + IN+Q R + L + LRDA + RN Sbjct: 117 CTGLPTSSEDFEFLIY-------GGDVEEKPINNQVRRRISLDLLDALRDAENQLGSWRN 169 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ-----GA 225 P P +E R +D + L++ +L + +++L+ S+Q G Sbjct: 170 S--PLRPLIENAMRAID--STTLTTISADLEAANKKIVEQPQIKVLDSSLSKQILSLSGK 225 Query: 226 GQARYRLMRRRASNEQRSWR----YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 G +R ++ R +R Y+D R I+ S VIL+ L + + R Sbjct: 226 GHDLKPSLRFSNADPLRLFRSLGMYIDEGKRSINEASLGSANVILMALKL----EEFSWR 281 Query: 282 LDKDAR--PLLLIEDPETRLHP-IMLSVAWHLLNLLPLQR--IATTNSGELLSLTPVEHV 336 +K+ R LL IE+PE LHP + SV ++ N + I T++S L ++ P+ + Sbjct: 282 KEKNERNYSLLCIEEPEAHLHPQLQRSVFKNIFNEKDSAQALIITSHSPTLAAVVPLRSI 341 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 L + ++ A+ L + ++ I ++ R LF++ + VEG+ E +I Sbjct: 342 VNLRQINNSTKAFSLANLPIDEDEKDDIERYLIATRSEILFSKGIIFVEGDAEEALIPSF 401 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 A G+ D GI V KP VK A +GI + ++ D D Sbjct: 402 AELLGYDLDGFGITVCNIGGVNFKPYVKLASSLGIPFTIITDWD 445 >UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escherichia coli E24377A RepID=A7ZRD6_ECO24 Length = 607 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 119/526 (22%), Positives = 217/526 (41%), Gaps = 59/526 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 +++++V I GFRGI+ + + L + VL+G+N GK+S++ A+ L + S + +DF Sbjct: 3 ILIDKVRISGFRGISNIEITLPRVTVLLGQNNAGKTSVIKAMQLAMGDYS--RYLSDEDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC--------TDGYHRIFY 112 G+ R+ + + L F ++ G R++ W DG + Sbjct: 61 HI--GEDEKRQEAITVDLRFI-AVDGETRIKE---FSENWQQVFGEKIQSEPDGSQFVCI 114 Query: 113 RLEGESAE-DGSVMTLRSFLDKDGHPIDVED--INDQAR-----HLVRLMPVLRLRDARF 164 R + G + R LD ++ +D +N++ R V +P+ RD Sbjct: 115 RTTAKPDRVKGGYVVERFHLDIWPERMNWQDARVNNKNRLGKRLEFVPFIPIDAQRDIHS 174 Query: 165 MRRIRNGTVPNV-PNVEVTARQLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYFSE 222 + ++ V V +VE + + L R ++ + + + + + L + L F Sbjct: 175 ELKEKSSFVGRVLSSVEYDDKDVAELERMVAEINKEAIEKSEPLKRLKNHLDNLNQSF-- 232 Query: 223 QGAGQA-------RYRLMRRRAS---NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 +G+GQ + R + +R S E + + M G RS+ +L T Sbjct: 233 EGSGQTELTPFPKKIRDLSKRFSVNFGESDKSSFSMEYHGM----GTRSWASMLTVKAFT 288 Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTP 332 L K + P++ E+PE LHP + L P Q I +T+S + L Sbjct: 289 ELLVKNHEEEAEPFFPIMAAEEPEAHLHPNAQRTLYRQLVDAPGQVIISTHSPYIAGLAE 348 Query: 333 VEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + + L ++ + V ++L +D R++ + +R LF++ +L EGETE Sbjct: 349 LHEIRFLSKQENSVCVYQL-RDKFDGDDLRKLRREVVHSRGELLFSKAIVLSEGETEEQA 407 Query: 393 INELARQ-CGHHFDAEGIKVIEFAQSGLK--PLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 + EL G H + GI + SG K P + A+ I + DG+E T Sbjct: 408 LPELFEAYTGKHPFSLGINFVGVNGSGAKYRPFLILAKDFNIPVFIFSDGEE------QT 461 Query: 450 VRSLLNNDREA-------EREHLTALPALDMEHFMYRQGFSDVFHR 488 V+ L N + ++T L D E ++ QGF + + Sbjct: 462 VKDLKKNYEKVFGVTDIMNAANITILEGTDFEGYLLSQGFDQLIEK 507 >UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea RepID=Q12XW2_METBU Length = 594 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 107/503 (21%), Positives = 201/503 (39%), Gaps = 87/503 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS-----PESDLY-- 53 ++++ V I GFRG+ + + LEQ +L G N GK+S L AL L L + D + Sbjct: 3 ILIKTVRIAGFRGLENIEVELEQTTILTGMNNTGKTSFLKALQLALGNRQFVSQDDFFIK 62 Query: 54 -HF-------------------ERDDF---W---FPP----GDINGREH-HLHIILTFRE 82 F ERDDF W F D GR L ++TF E Sbjct: 63 GDFVSKEIIVDLLIVPINGDGDERDDFSPDWETLFTIERVRNDDAGRSFVPLRTVITFDE 122 Query: 83 ---SLPGRHRVRRYRP--LEACWTPCTDGYHRIFYRLE--GESAEDGSVMTLRSFLDKDG 135 + + + ++ P ++ P ++ +Y ++ G+S++ F D Sbjct: 123 VNNNYKTQQFILKFWPELIKKFDVPGSEQKDINWYEVKDIGDSSKSNFHFDEIPFFYMDA 182 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARF------MRRIRNGTVPNVPNVEVTARQLDFL 189 +EDI + +L +++ ++ D ++ + V + P + + L L Sbjct: 183 QRDILEDIKLRFSNLGKMLSKIKYSDDDINEIESQIKTLNEKAVSSSPILSILKTNLKEL 242 Query: 190 ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 + SH + + + + + + L Y+++Q RSW L Sbjct: 243 DTAMDSHGEGIEITPFTKKIRDLNKGLTIYYNDQNES-----FPMENHGMGTRSWSSL-- 295 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR--PLLLIEDPETRLHPIMLSVA 307 + L F LL ++K + P+L IE+PE LHP Sbjct: 296 ---------------LALKAFVFLLSNNA---MEKGTKFFPILTIEEPEAHLHPNAQKKL 337 Query: 308 WHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFH 367 + ++ + Q+I +T+S + S + + R ++ +V ++ L ED R+I+ Sbjct: 338 YEQIDSIVGQKIISTHSPSITSAARLSQI-RNFYKNEKVTCGKIETDKLEPEDIRQINRQ 396 Query: 368 IRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKV-IEFAQSG----LKPL 422 + R F++ + VEGETE + A + +F +++ ++F G P Sbjct: 397 VTNTRGEIFFSKVLVFVEGETEEQALPIFAEK---YFKKSPVEIGLDFIGVGGHPKYLPF 453 Query: 423 VKFARRMGIEWHVLVDGDEAGKK 445 ++FA + I W +L D + + K+ Sbjct: 454 LRFAEALNIPWLILSDAELSTKE 476 >UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWN1_ACICJ Length = 647 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 1/126 (0%) Query: 357 STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ 416 + ED + FH R R FAR W++VEG TE +++ L + G D G+ VI+F Q Sbjct: 452 TAEDEEELGFHGRRVRGEIFFARRWIMVEGVTEYLLLHALGKALGWPLDDHGVAVIDFQQ 511 Query: 417 SGLKPLV-KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEH 475 SG + A GI W+++VDGD G+K+ + +D E E +T P D+E Sbjct: 512 SGNAGIYPALAEAFGIPWNMIVDGDHEGEKFRRQIIDRGFDDEELEGRFVTLTPQNDLED 571 Query: 476 FMYRQG 481 + G Sbjct: 572 QLLADG 577 >UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms RepID=B0KSV7_PSEPG Length = 574 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 190/465 (40%), Gaps = 56/465 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS---PESDLYHFER 57 M++ RV + GFR ++ LE+N ++IG N GK++L+ AL LLL ++++ E Sbjct: 1 MLITRVVLKGFRNFADATVGLERNTLIIGANNVGKTNLVYALRLLLDKSLSDAEIEPMES 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D G I+ HL I + F E + L+G Sbjct: 61 DFHISSAGKISD---HLSITIYFSEV----------------------SEDAVLASLKGN 95 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR--DARFMRRIRNGTVPN 175 +D S L+ D+ ++ I LV + L+ + R+++ R+ + Sbjct: 96 ITDD-SCFVLQYTADRRSLTYQIK-IGATKPSLVEIPSRYYLKHINLRYVKSRRD--LEK 151 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSD----GQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 N E RQL L+ E S ++ SD +I + L A+ + + +GA + Sbjct: 152 YINSE--KRQLLKLSLENRSDDESKSDHRQMARIGKALEAINGRIRNLHYVKGATDSVNE 209 Query: 232 LMRRRASNEQRSWRYLDI----INRMID--RPGGR-SYRVILLG-------LFATLLQAK 277 +++ A + LD + + ID R G S ++LG + L +AK Sbjct: 210 ELQKLAHDFSEYEVKLDSGAIQVQQFIDSLRLGASTSGASVMLGGDGRNNQILMALWKAK 269 Query: 278 GTLRLDKDARPLL-LIEDPETRLHPIML-SVAWHLLNLLPLQRIATTNSGELLSLTPVEH 335 D D+ + +E+PE LHP +A +L+N LP Q T++S ++ + Sbjct: 270 SQREHDPDSEVVFYCVEEPEAHLHPHQQRKLADYLINDLPGQTFITSHSPQITARYTPSS 329 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + L R A G S ++ + + + + FA+C LLVEG +E +E Sbjct: 330 IVHLKVTGGRTKAASNGCSNCISKAWDHLGYRMSILPAEAFFAKCVLLVEGPSEILFYSE 389 Query: 396 LARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 LA++ D I ++ VK M I W + D D Sbjct: 390 LAKKLSIDLDFYNISILSVDGIQFSVYVKILDAMEIPWVMRTDND 434 >UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD family n=3 Tax=Proteobacteria RepID=Q13ZS1_BURXL Length = 613 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 122/493 (24%), Positives = 191/493 (38%), Gaps = 87/493 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L R+ I FR + L ++ V++GEN GK++LL AL L+L P D Sbjct: 1 MRLSRIVIKNFRNFKHFDVRLGEHAVVLGENKVGKTNLLFALRLILDPALPDSSRRLRID 60 Query: 59 DFWFPPGDINGREHHLHIILTFRE--------SLPGRHRVR----------RYRPLEACW 100 DFW E + + + FR+ ++ H VR RY+P++ Sbjct: 61 DFWDGLARPLKAEDVIEVSVEFRDFENNENLLAVLADHLVRPDPMVARVTYRYQPVQGLE 120 Query: 101 TPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR 160 F G E+ LR ++ P+D L P LR Sbjct: 121 GAPRSEADYEFILFGGGRIENAIGYELRRWM-----PMD-------------LFPALRDA 162 Query: 161 DARFMRRIRNGTVPNVPNV--EVTARQLDFLARELSSHPQN------LSD--GQIRQGLS 210 ++ R R+ P + V A+ L +A E+ + LSD Q+ L+ Sbjct: 163 ESDLARWSRSPLRPLLDRAAKTVDAKALSAIAGEVHATTSKIAALPELSDVVSQVNDQLT 222 Query: 211 AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG-- 268 MV G A + + +R R L + MID G R LG Sbjct: 223 VMV----------GDKHAVKTALGFAPTEPERLLRALQM---MIDS-GKRGVAEASLGSA 268 Query: 269 --LFATLLQAKGTLRLDKDAR--PLLLIEDPETRLHPIMLSVAWHLLNLL---------- 314 L+ L + +D+ R L IE+PE LHP + + + N L Sbjct: 269 NVLYLALKHLEHQYLVDEGERQHTFLAIEEPEAHLHPHLQRLIYR--NYLQTRDEVQADT 326 Query: 315 -PLQRIATTNSGELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFN 371 P + TT+S + S+ P+ +V R V ++ L L+T D + +I Sbjct: 327 EPRSILLTTHSPNVASVAPLANVVVLRHVVDAGHTVGRSLKGVKLNTSDREDLERYIDVT 386 Query: 372 RPSSLFARCWLLVEGETETWVINELAR--QCGHHFDAEGIKVIEFAQSGLKPLVKFARRM 429 R F++ +LVEG+ E +++ LA+ FDA GI V A + P V+ + Sbjct: 387 RGELFFSKGVILVEGDAEKFLLPTLAKLNDKALDFDAMGISVCSIAGTNFAPYVQLLGQK 446 Query: 430 GIE--WHVLVDGD 440 G++ + VL D D Sbjct: 447 GLDIPFVVLTDFD 459 >UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepID=Q1LBX9_RALME Length = 598 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 289 LLLIEDPETRLHP-IMLSVAWHLLNLLP------LQRIATTNSGELLSLTPVEHVCRLVR 341 +L IE+PE LHP + SV HL L L + TT+S + S+ P+ + L+R Sbjct: 292 VLAIEEPEAHLHPHLQRSVYRHLFEDLAGAQGEQLSLMLTTHSPHIASVAPLRSLV-LLR 350 Query: 342 ESSRVAAWRLGPSGLS-TEDSRR-ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 ES + + +S TED ++ ++ R LFAR +LVEG+ E +++ +A Sbjct: 351 ESPQNGTVGTSSAEISLTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVMAAS 410 Query: 400 CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD-EAGKKYAATVRS 452 GH D GI + + + P KF +GI + ++ D D GKK RS Sbjct: 411 MGHDLDHLGITICSVSGTNFTPYAKFLTALGIPFSIITDWDPRVGKKPLGFNRS 464 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L+R+ I FR ++ + L+ + V++GEN GKS+LL AL L+L P + Sbjct: 1 MKLKRIYISNFRNFEQIDVALDGSVVVVGENRVGKSNLLFALRLILDPSLPDSARQLGQG 60 Query: 59 DFW 61 DFW Sbjct: 61 DFW 63 >UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CCC7_9BACE Length = 588 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 7/227 (3%) Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 P++ IE+PE+ LHP + + +P Q+I +T+S + +E++ L + + V+ Sbjct: 305 PIIAIEEPESHLHPNAQKKLYRQMYEMPGQKIISTHSPYVACSANIENLRGLYKNLNNVS 364 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA-RQCGHHFDA 406 L + + +D R++ + R LF++ +L EGETE + +A + G Sbjct: 365 CGILNLNEMDDDDKRKLRQKVINTRGEILFSKAIVLFEGETEEQALPIMAEKYFGCPASE 424 Query: 407 EGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDG-DEAGKKYAATVRSL---LNNDREAE 461 GI I +G P ++FA+ I W++ DG D+ K A V+ + L E E Sbjct: 425 LGINFIGVGGAGSYFPFLQFAQSFNIPWYIFSDGEDDPVSKMTAAVKKIRKELFTTIENE 484 Query: 462 REHLTALPALDMEHFMYRQGF-SDVFHRMAQIPENVPMNLRKIISKA 507 + D E ++ R + +D+ + QI + +N + SKA Sbjct: 485 KNIFIIDHKEDFEKYIIRLDYLNDIKSYLKQIELSKCVNEQHKESKA 531 >UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T041_ACIDE Length = 599 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%) Query: 289 LLLIEDPETRLHP-IMLSVAWHLLNLLP-------LQRIATTNSGELLSLTPVEHVCRLV 340 LL IE+PE LHP + SV HL L L + TT+S + S+ P+ + L+ Sbjct: 292 LLAIEEPEAHLHPHLQRSVYRHLFEDLAAAPAGEQLSLLLTTHSPHIASVAPLRSLV-LL 350 Query: 341 RESSRVAAWRLGPSG----LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 RES + +G S L+ ++ ++ ++ R LFAR +LVEG+ E +++ Sbjct: 351 RESKDEST--VGTSAATIELTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVF 408 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 A GH D GI V + + P KF +GI + ++ D D Sbjct: 409 AASLGHDLDHLGITVCSVSGTNFTPYAKFLTALGIPFSIVTDWD 452 >UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E55 Length = 479 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 8/159 (5%) Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 PL+L+E+PE LHP ++ +N + Q+I +T+S ++ ++ + + +E Sbjct: 309 PLILLEEPEAHLHPQAQRKIFNQINGIAGQKIVSTHSPMIVGQVDIDDIRHISKEEGMSK 368 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 + + L E+ R+I I R LFA +L EGETE + ++ +F+ E Sbjct: 369 INYVDTTELDYEEIRKIRQEIFKTRGDLLFANAIILCEGETEEQALPVFFKE---YFECE 425 Query: 408 ----GIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDE 441 GI VI G KP ++ A+ I +++L DG++ Sbjct: 426 TFEAGINVISVGGKGKYKPFLRIAKDFNINFYLLSDGEK 464 >UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM55_ANOFW Length = 669 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 +L IE+PE LHP + + + + + + TT+S + S+ P+ + + ++ Sbjct: 353 ILAIEEPEAHLHPTLQRIIYRDVMVGNSSVLMTTHSPHITSVAPINSIVHMRWTNNGTQV 412 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 L+ + R + ++ R F + +LVEG E ++I A D +G Sbjct: 413 HTTSNLSLTPTEKRDLERYLDVKRGEIYFGKGVILVEGIAEEYLIPRFAELLDKPLDQKG 472 Query: 409 IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 I V + P VKF +GI + V+ DGD Sbjct: 473 IVVCNINSTNFAPYVKFLDALGIPYVVITDGD 504 >UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=B0RTN2_XANCB Length = 595 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 116/496 (23%), Positives = 193/496 (38%), Gaps = 65/496 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP---ESDLYHFER 57 M + R+ ++ F + + + ++ V++GEN GKS+ + L L+L P E D Sbjct: 1 MRISRIRLINFANFSDIDIETGESIVIVGENKVGKSNFIRGLQLILDPGLSERD-RQLRL 59 Query: 58 DDFWFPPG-DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLE 115 + FW G D G + + LT P R L C P R+ YR + Sbjct: 60 EHFWDGLGEDKVGETVEVSVDLTDFTDDP-----RLMAHLNDCVIDPGPPMVARLTYRFQ 114 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQ--ARHLVRLMPV---LRLRDA-RFMRRIR 169 ++ + +L+ + + I D D L R++P+ + LRDA + + R Sbjct: 115 PKTGLGHAPESLKDY----EYVIFGGDDPDMRIGGALRRMLPIDVQVALRDAEKDLASWR 170 Query: 170 NGTV-PNVPNV---------EVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEH 218 N + P + ++ E Q+D REL+ H + ++ + I + L A+ Sbjct: 171 NSPLRPLIEDLAASLNDDTREEIQNQVDQAQRELAGHEEVVATAERISERLIAIA----- 225 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 EQ A L R RS R L ID G R LG + A Sbjct: 226 --GEQHAVPMSLGLAPTRVDALLRSLRLL------IDN-GVRGVGDASLGTANLIFLALK 276 Query: 279 TLRLDK---DAR---PLLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTN 323 +L LD+ D ++E+PE LHP + + + PL I TT+ Sbjct: 277 SLELDRLVSDGERDHTFFVVEEPEAHLHPHVQRLIYRYFLGTGAEDGDEQPPLTTILTTH 336 Query: 324 SGELLSLTPVEHVCRLVRESS--RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCW 381 S + S+ P+ + L +++ + A + + D + +I R F+R Sbjct: 337 SPHIASVAPIRSIVLLRHDAAEGKTVAVSTANAPFTQRDEEDLQRYIDVTRGEIFFSRGV 396 Query: 382 LLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKF--ARRMGIEWHVLVDG 439 +LVEG+ E +++ A D GI V + P VK + I +L D Sbjct: 397 ILVEGDAERFIVPAFAEVLNIPLDMLGITVCSVGGTNFTPYVKLLGPEGLNIPHVILTDR 456 Query: 440 DEAGKKYAATVRSLLN 455 D + R L+N Sbjct: 457 DPTNGNHPLVRRRLIN 472 >UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T068_ACIDE Length = 674 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 95/221 (42%), Gaps = 26/221 (11%) Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 F+E G AR R + R LD++ P GRS LG L A Sbjct: 251 FAEGGTDTARLRQILERLE--------LDLLAG----PDGRSRGTYGLGSNNLLFMACEL 298 Query: 280 LRLDK--DARPLLLIEDPETRLHPI-------MLSVAWHLL---NLLPLQRIATTNSGEL 327 L L K D PLLLIE+PE LHP L A L +Q I T++S L Sbjct: 299 LLLGKEPDGLPLLLIEEPEAHLHPQRQLRLMEFLEAAAEPLAEGTRRQVQVIVTSHSPNL 358 Query: 328 LSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 S P++++ L R + A G + LS D R + + + + FAR ++VEG+ Sbjct: 359 TSKIPLQNLVLLHRRGAYSMAE--GHTHLSKSDYRFLQRFLDVTKANLFFARGLIVVEGD 416 Query: 388 TETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR 428 E ++ LAR G G+ ++ +GL+ + +R Sbjct: 417 GEALLVPTLARLIGRDLTQHGVSIVNVGGTGLRRYARILQR 457 >UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q1T7_RHIE6 Length = 648 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 184/466 (39%), Gaps = 58/466 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M L V I FR + L L N+++GEN GK++L+DAL LS S + +D Sbjct: 1 MYLSEVSIKDFRVLTDFRLRLNPGINLIVGENNSGKTALVDALRYALSVNSGEWTRVQDR 60 Query: 59 DF---------WFPPGDINGREHHLHIILTFRESLPGRHRVRR--YRPLEACWTP-CTDG 106 DF DI R+ + E++PG + R Y +A T G Sbjct: 61 DFRRGARSFSIQLKFEDITARQAAAFVEHLTHETIPGTNNRRSVLYLNYQAEQTTHLVRG 120 Query: 107 YHRIFYRL-EGESAEDGSVM-TLRSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDAR 163 +I L G +AE SV R FL P+ D RL +L + Sbjct: 121 ARQIRTELRSGANAEGPSVEREARDFLATTYLRPLRDADAELMGGRGSRLAQILGSSE-- 178 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIR------QGLSAMVQLLE 217 R V N+ VTA +S+ + + + Q+R + LS ++ ++ Sbjct: 179 --RFGEADVVENLLTTIVTANAAIVENDGVSATRERIEE-QLRRLDFRTKPLSPLISIMG 235 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 EQ R ++ R L+ + +ID R LG L A Sbjct: 236 GTDLEQLDASERKQMFRA----------ILERLQLLIDS----QERYQGLGYSNLLFMAT 281 Query: 278 GTLRLDKDAR--PLLLIEDPETRLHPIMLSVAWHLLNLL---------PLQRIATTNSGE 326 L L+++ PLLLIE+PE LHP + L L LQ I TT+S Sbjct: 282 ELLLLEQEQHDFPLLLIEEPEAHLHP---QLQMKFLRALREGFGGQNSSLQSILTTHSPN 338 Query: 327 LLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 L S P+E+V + + + R + L ++ + + + + FA+ ++VEG Sbjct: 339 LASKAPLENVILMA--EGKAFSLRKDETRLDAQNYVHLEKFLDVTKSNLFFAKSVMIVEG 396 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 + E +++ A G F+ G+ V+ P + +R G++ Sbjct: 397 DGENILLSTFADLLGTPFEDFGVSVVNVGSIAFAPFARIFQRAGMD 442 >UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKF9_DESAA Length = 671 Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 102/467 (21%), Positives = 185/467 (39%), Gaps = 58/467 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-----NVLIGENAWGKSSLLDAL-TLLLSPESDLYH 54 M L ++ I FR E + L+GEN GKS+++DA+ +L + + + Sbjct: 1 MYLSKITIENFRCFGERDKKFEMSLKPGLTTLVGENDAGKSAIIDAIRYVLCTTDQEWLR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + +DF + + I+ F + L H+ R T G + L Sbjct: 61 IKENDFH-----VGANPKEIRIVCKF-DDLEAHHQ----RAFIEYLTHDASGAKPPVFFL 110 Query: 115 EGESAEDGSVMTLRSFLDKD---GHPIDVEDINDQARHLVRLMPVLRLRDAR-------- 163 + E G +M R + + G + I+ + R L+ + + LRDA Sbjct: 111 HWTAKETGEIMKGRPYRRIELHSGEKGEGPSIDPKVRELLSVTYLRPLRDAERALSAGRG 170 Query: 164 --------FMRRIRNGTVP---NVPNVEVTARQLDFLARELSSHPQNLSDG--QIRQGLS 210 +++ P V N E++ + LA L + + + QI L Sbjct: 171 SRLSQVLYHTEEVKSSGKPYGEGVANEELSVTGIGELADALIKNQPGIVETRKQIDNHLE 230 Query: 211 AMVQLLEHYFSE-QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGL 269 + L S+ + +G A +R R E+ LD+ I +PG S ++ + Sbjct: 231 KLTLLGNPICSKVEVSGAAASPDVRLRQLLEK-----LDLSLDEIGKPGLGSNNLLFMAC 285 Query: 270 FATLLQAKGTLRLDKDARPLLLIEDPETRLHPI----MLSVAWHLLNLLPLQRIATTNSG 325 LL + + +LLIE+PE LHP ++ +Q I TT+S Sbjct: 286 ELLLLAQ------ENEGNRMLLIEEPEAHLHPQRQLQVMKTLQEEAEEKKIQIIVTTHSP 339 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 L S ++ + L+ E+ + + G + L D + + + + + FAR ++VE Sbjct: 340 NLASAIKLKGLT-LIHEN-KAFSMAEGETKLEKSDYQFLERFLDVTKANLFFARGVMIVE 397 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 G+ E +I LA+ G F G+ ++ GL+ + +R+ IE Sbjct: 398 GDAENILIPTLAKLIGRDFTENGVSIVNVGGVGLRRYARIFQRVHIE 444 >UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R657_KANKD Length = 661 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 112/501 (22%), Positives = 206/501 (41%), Gaps = 74/501 (14%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E++ I FR + + M +G N GKS+L+ AL + + R Sbjct: 1 MEIEKISISNFRCFSEAEAVIFMESDITCFVGNNGTGKSALILALKRIFGSTREERTVIR 60 Query: 58 DDFWFPPG----DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 +DF+ G +I+GRE ++ II +F E R P + R+ R Sbjct: 61 EDFYVGSGEDYKEISGRELYIEIIFSFPELQTAVDESREVCPAFSSVIYADQDDKRLKAR 120 Query: 114 LEGESAEDGSV-----------MTLRSFLD-----KDGHPIDVEDINDQARHL-VRLMPV 156 + ES D + +T + +D ++ P+ V D +H+ +R +P Sbjct: 121 MRLESKWDENEYEDEVQSQLYWITTSNKVDFGDDAENKFPVSVYD----RKHIKLRYIPA 176 Query: 157 LRLRDARFMRRIRNGT--VPNVPNVEVTARQ-LDFLARELSSHPQNLSDGQIRQGLSAMV 213 R + +++ T + ++ +++++ ++ ++R+LS+ Q+L I+ S + Sbjct: 177 FRDSKSTLKNEVKSLTNLLDGYTDLNISSQEKIEAISRDLSNEIQSLE--SIKTATSLLK 234 Query: 214 QL--------LEHY------FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGG 259 Q+ L+HY + G+ + + + +E R IN + D G Sbjct: 235 QVWNNTHDKTLKHYQEPKLEAASTEIGELLRTMTVKLSPSEDGGSR---DINELSD--GQ 289 Query: 260 RSYRVILLGLFATLLQAK---GTLR----LDKDARPLLLI---EDPETRLHPIMLSVAWH 309 S L + +L+ K G LR LD+D P+ I E+PE L P L Sbjct: 290 ISLLYFTLSVVLYILEQKHHSGELRGFKSLDRDI-PVFTIFAFEEPENHLSPFYLGRVIE 348 Query: 310 LL----NLLPLQRIATTNSGELL----SLTPVEHVCRLVRESSR--VAAWRLGPSGLSTE 359 +L N L I T++S ++ + + H + V + R + L PS + + Sbjct: 349 VLSTQTNSLKATGIITSHSTSVVRRMQRVEQIRHFRQEVNSTDRYSIVNQVLLPSEKAED 408 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D + I+ I P FA+ +L EG++E VI +LA G D + ++ + Sbjct: 409 DYKYINQAI-LAHPELYFAKLVILGEGDSEEIVIPKLAEALGFDLDPSFVSFVKLGGRHV 467 Query: 420 KPLVKFARRMGIEWHVLVDGD 440 + + + I + LVD D Sbjct: 468 NHMWRLLSDLNIPFLTLVDMD 488 >UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepID=D2LS06_BACS4 Length = 669 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 63/149 (42%) Query: 292 IEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 IE+PE LHP + + + + TT+S + S+ P++ + L + Sbjct: 352 IEEPEAHLHPTFQRIIYKDVMKKNTSVLMTTHSPYITSVAPLDSIVHLRATNQGTVVHST 411 Query: 352 GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKV 411 L+ + R + +I + F + +LVEG E ++I A D +GI Sbjct: 412 ATIELTDGERRDLERYIDVKKGEIYFGKGVILVEGIAEEYLIPAFADLLEKPLDLKGIIC 471 Query: 412 IEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 + KP VKF +GI + L DGD Sbjct: 472 CNINSTNFKPFVKFLDLLGIPYVALTDGD 500 >UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=Q74JQ3_LACJO Length = 578 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 8/182 (4%) Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIML-SVAWHLLNLLPLQRIATTNSGELLSLTPVE 334 A+ L+ D IE+PE LHP +A +L L Q I T++S ++ + E Sbjct: 263 ARQELKAGPDHVTFYAIEEPEAHLHPHQQRKLAQYLTKSLKGQVIVTSHSPQIAEIFKAE 322 Query: 335 HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS--LFARCWLLVEGETETWV 392 ++ RL + A GP+ ++S +F+ R N S+ F+ LVEG +E Sbjct: 323 NIVRLYFHNKYTEAAS-GPNDAQIKNSFN-AFNYRLNTLSAEVFFSYGVFLVEGVSEVIF 380 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD---EAGKKYAAT 449 LA++ G D I ++ G KP + + I W + D D +KY A Sbjct: 381 YKALAKENGIDLDRLNISILAVEGIGFKPYINICNALSIPWVLRTDNDIFKNREEKYYAG 440 Query: 450 VR 451 ++ Sbjct: 441 IK 442 >UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GF29_GEOUR Length = 640 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 106/473 (22%), Positives = 188/473 (39%), Gaps = 51/473 (10%) Query: 6 VEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPG 65 V I FR + + + L+ VLIG N GK+S LDA+ + L +DD P Sbjct: 37 VRIANFRSLMDIEVSLDSLTVLIGANNAGKTSFLDAIYAAIGAGRKL--LGQDDIRVAPE 94 Query: 66 D-INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC---------TDGYHRI--FYR 113 + I ++ ++ I + R + + P + WT TD H F Sbjct: 95 EAIPPKDRNVVIDIKIR-PITDDGKFADEFPEGSFWTSLWGSGITPAETDDSHEFMAFRT 153 Query: 114 LEGESAEDGSVMTLRSFLDKDGHP-------------IDVEDINDQARHLVR----LMPV 156 + S G + R FL K+ P + DI A H + L Sbjct: 154 ILSWSFAKGDYVLERKFL-KEWRPYAEWLPTPMQEKRLQSSDIEPIALHYIDAKRDLDDD 212 Query: 157 LRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQL 215 LR + F R++ + ++ ++ + FL L+ Q++ D +I + L + Sbjct: 213 LR-KQGSFWRKLTD-------DLGLSPADIIFLEEALTGINQHIVDKSEILKHLKHNLAD 264 Query: 216 LEHYFSEQGAG---QARYRLMRRRASNEQRSWRYLDIINRMIDRPG--GRSYRVILLG-L 269 ++ + +GAG R +R + S+ + + R G RS +L+ Sbjct: 265 MQSVVAAEGAGIDISPVARRLRDLSKGIDVSFSTTAAQSFPLTRHGMGTRSLASLLVFRA 324 Query: 270 FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLS 329 FA+ ++ + D+ L +E+PE+ LHP + + +P QRI +T+S Sbjct: 325 FASWRSSQAQMEGDQ-IHTFLALEEPESHLHPQAQRSLFSHIKTIPGQRIVSTHSPYFAG 383 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLST-EDSRRISFHIRFNRPSSLFARCWLLVEGET 388 + + ++ +L S L T ED R++ + R LF+R + EG+T Sbjct: 384 QAQLSDLRLFLKRGGNTIVTQLDISQLGTKEDLRKLQQTVVDTRGDLLFSRAVIFFEGQT 443 Query: 389 ETWVINELARQCGHHFDAE-GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 E + A + + E G + + P + A+ + I W+VL DG+ Sbjct: 444 EEQALPIWAEKYWNASIHELGFSFVRVNGTDYFPFISLAQHLEIPWYVLADGE 496 >UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0KM73_PECWW Length = 596 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 289 LLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTNSGELLSLTPVEHVCRL 339 ++E+PE LHP + + + PL I TT+S + S+TP+ + L Sbjct: 293 FFVVEEPEAHLHPHVQRLVYRYFLGTDGDNRDESTPLTTILTTHSPHIASVTPIRSIVLL 352 Query: 340 VR--ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 E A + + D + +I R F+R +LVEG+ E +++ A Sbjct: 353 RHDPEEEETIAVSTVNAPFTQRDEDDLQRYIDVTRGEIFFSRGVVLVEGDAERFLVPAFA 412 Query: 398 RQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEW-HV-LVDGDEAGKKYAATVRSLLN 455 G D GI V + P VK G++ HV L D D ++ R ++ Sbjct: 413 DALGIPLDMLGITVCSVGGTNFTPYVKLLGPQGLDIPHVILTDRDPVNGRHPLVRRRFIS 472 Query: 456 NDREAEREHLTALPALDMEHFM 477 E EH +D E + Sbjct: 473 LLELVEYEHYRDYENMDAEDVI 494 >UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=C5VAS3_9CORY Length = 679 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 26/208 (12%) Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP-----LQRIATTNSGEL 327 LL AKG + PLLL+E+PE LHP L +Q I +T+S L Sbjct: 306 LLIAKGDIGF-----PLLLVEEPEAHLHPQRQLQLLEYLLEQAEGTSKIQVIISTHSPIL 360 Query: 328 LSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 S VE++ ++ + + G + LS D +S + + + FA ++VEG+ Sbjct: 361 TSKVKVENI--ILVNHGKAHSLAKGKTQLSNNDYSFLSRFLDVTKSNLFFAENLIIVEGD 418 Query: 388 TETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYA 447 E +I +A+ G+ GI +I GL+ + +R DE + Sbjct: 419 AEELLIPVIAKLIGYDLTKHGISIINVGGVGLRRYSRIFQRK----------DENAQPVG 468 Query: 448 ATVRSLLNNDREAEREHLTALPALDMEH 475 V ++ + D E ALP L EH Sbjct: 469 IRVSNITDRDLIPE----AALPILGYEH 492 >UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R009_CLOBU Length = 662 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 2/154 (1%) Query: 289 LLLIEDPETRLHPIMLSVAWH-LLNLLPLQRIATTNSGELLSLTPVEHVCRL-VRESSRV 346 +L+IE+PE LHPI + + ++ I TT+S + ++ ++ + L R S Sbjct: 344 ILVIEEPEAHLHPIYQRLIYKDVIKKNDNSVILTTHSTHITAIADIKSIVHLHKRNSGET 403 Query: 347 AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDA 406 LS + + ++ R + +LVEG E ++I + A G D Sbjct: 404 EINTTASLDLSGPELLDLERYVDIKRGEIYLGKGVILVEGIAEEFLIPKFAEIMGKSLDE 463 Query: 407 EGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 GI V + KP VK ++ I + V+ DGD Sbjct: 464 IGIIVCNINCTNFKPYVKLLMQLDIPFTVITDGD 497 >UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1TJY9_ACIAC Length = 712 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 4/134 (2%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 LLIE+PE +H + + L Q I +T+S + ++ V++V L RE R A Sbjct: 348 FLLIEEPEAHIHTHIQKTLFDRLQYDDTQIIYSTHSTHISEVSNVQNVNILGRERDRCEA 407 Query: 349 WRLGPS-GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDA 406 ++ PS GL E+ I ++ R + LFA+ +LVEG+ E +I L ++ G D Sbjct: 408 YQ--PSTGLGPEEIGNIQRYLDAVRSNLLFAKSVILVEGDAEEILIPILVKKVLGISLDE 465 Query: 407 EGIKVIEFAQSGLK 420 GI +I +G + Sbjct: 466 LGISLINIRSTGFQ 479 >UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax=Enterobacteria phage P2 RepID=VOLD_BPP2 Length = 586 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 9/198 (4%) Query: 252 RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIML-SVAWHL 310 R I R G + R I + L L + K K + L+ I++PE LHP + SV L Sbjct: 258 RDISRFGHGTQRSIQMALIQYLAEIKKENSESKKSNTLIFIDEPELYLHPSAINSVRESL 317 Query: 311 LNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST-EDSRRISFH 367 + L Q I +T+S +LS + ++ ++S+ A + + S H Sbjct: 318 VTLSESGYQVIISTHSASMLSAKHAANAIQVCKDSNGTIARKTISEKIEELYKSSSPQLH 377 Query: 368 IRFNRPSS---LFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVIEFAQSG-LKPL 422 F +S LF+ LLVEG+TET V+ L ++ GH + I ++ G L + Sbjct: 378 SAFTLSNSSYLLFSEEVLLVEGKTETNVLYALYKKINGHELNPSKICIVAVDGKGSLFKM 437 Query: 423 VKFARRMGIEWHVLVDGD 440 + +GI+ +L D D Sbjct: 438 SQIINAIGIKTRILADCD 455 >UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLY5_9FIRM Length = 663 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 287 RPLLLIEDPETRLHPIMLSVAWHLL-----NLLPLQRIATTNSGELLSLTPVEHVCRLVR 341 + LLL+E+PE LHP + + L N +Q I T++S L S ++++ L Sbjct: 341 QNLLLVEEPEAHLHPQLQELVHDFLSDANKNDGNIQIIYTSHSPTLASKIDIDNINLLYE 400 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 + + L+ E+ + + ++ + FAR L VEG +E ++ +A+ G Sbjct: 401 YGHKKYCLPFSQTNLTEENKKYLQRYLDVTKSQMFFARGILFVEGISEAILLPAMAKALG 460 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKF-----ARRMGIEWHVLVDGDEAGKK 445 F+ ++++ P V + + V+ D D KK Sbjct: 461 RPFEKYAVELVNVDSVAFTPFVNLLSSDKVKTCFSKVSVITDDDRCAKK 509 >UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fischeri MJ11 RepID=B5FD69_VIBFM Length = 648 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 9/138 (6%) Query: 269 LFATLLQAKGTLRLDKDARP---LLLIEDPETRLHP-IMLSVAWHLLNLLP----LQRIA 320 L+ + A+ TL D + +P LLLIE+PE LHP + + + HL ++ +Q I Sbjct: 276 LYIASIMAELTLDEDDEEQPIFKLLLIEEPEAHLHPQLQIRLLTHLKSVAEKNKNVQVIV 335 Query: 321 TTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARC 380 TT+S L S +E + L R VA L GL T S+ I+ + + + LFA Sbjct: 336 TTHSTVLASSVELESIIHLSRSPEPVAT-PLRTCGLPTASSQFINRWLDVTKSNLLFANG 394 Query: 381 WLLVEGETETWVINELAR 398 +LVEG E +I LA+ Sbjct: 395 VILVEGIAEQMIIPTLAK 412 >UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q7WXG6_RALEH Length = 656 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 116/491 (23%), Positives = 177/491 (36%), Gaps = 64/491 (13%) Query: 1 MILERVEIVGFR--GINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E V I GFR G N ++ Q ++G NA GK+++L AL L Sbjct: 1 MHIESVTIAGFRCFGPNPTAIPFSQGLTAIVGPNASGKTAVLQALMRLFGVTRAQRTIVP 60 Query: 58 DDFWFPPGD---INGREHHLHIILTFRESLPGRHRVRRYRPL-EACWTPCTDGYHRIFYR 113 DF P + + R + + L+ E + G P+ G R Sbjct: 61 SDFHVTPTETERLKSRTLTIDVRLSLPELVDGSATAATVAPVFRHVRIERPGGTPLCRLR 120 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDI---NDQA-------RHLVRLMPVLRLRDA- 162 L +DG T + +D + I+ D +DQA R L++L RDA Sbjct: 121 LRARWDDDG---TAEGAVSQDLNWINTADDVVRDDQASPVAPGDRGLIQLFYTPASRDAG 177 Query: 163 ------------RFMRRIR--NGTVPNVP-------NVEVTARQLDFLARELSSHPQNLS 201 R +R I GT V N + + ++ LS + L Sbjct: 178 TQIRATTGALAARLLRAIEWSAGTQATVHAATEQLLNAFGSENAIQAISESLSKRWEKLH 237 Query: 202 DGQI--RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA----SNEQRSWRYLDIINRMID 255 DG I LS M + E + G R R S+ Q+S Y + + D Sbjct: 238 DGDIDCNPELSLMSRRFEEVVARIGVMFKRGPAGEDRGLDALSDGQQSLFYFALAAAVFD 297 Query: 256 RPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL- 314 + A +Q T L+ A L +E+PE L P LS + L Sbjct: 298 ---------VERAAVAGRIQGFRTEELNVPALTLFAVEEPENHLAPYYLSRILQQIRTLV 348 Query: 315 ---PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF--HIR 369 Q I +++S +L P + V R R + + P + T D I F + Sbjct: 349 ETGAGQAIVSSHSPSVLGRVPPDDV-RYCRRNQATGVSTVLPIPMPTSDVEAIKFVRNAF 407 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRM 429 P FAR LLVEG++E V+ LA D + ++ + + + Sbjct: 408 LAFPELYFARFVLLVEGDSERIVLPRLAEALNLLVDPSFVAIVPLGGRHVNHFWRLLHGL 467 Query: 430 GIEWHVLVDGD 440 GI + L+D D Sbjct: 468 GIPYATLLDLD 478 >UniRef50_Q1ZEF5 NADH-ubiquinone oxidoreductase (Fragment) n=2 Tax=Gammaproteobacteria RepID=Q1ZEF5_9GAMM Length = 377 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 32/230 (13%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 L+IE+PE +H + + N Q +T+S ++ S + + + L R+ S+ Sbjct: 32 FLMIEEPEAHIHNHIQKTLFENFNFKNTQVFVSTHSTQISSASKISSMNILARKESKTEV 91 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDAE 407 + SGL +++ I ++ R LFA+ +LVEG+ E +I L R+ G D Sbjct: 92 Y-FPASGLDEPNAQCIERYLDAVRSDILFAKSVILVEGDAELILIPALVRETLGVSLDEM 150 Query: 408 GIKVIE------------FAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455 GI +++ F ++ +K + + + D D A KY V+S ++ Sbjct: 151 GISLVKMDGTVFIHISDLFHKTRIKNYCSILTDLDASF--ITDEDFASDKY---VKSQID 205 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFH-------RMAQIPENVPM 498 ++ AL M ++ + + F+ + + PENV + Sbjct: 206 AEKSG------ALRKAKMNEYIKDNEYVEAFYAENTFETELVRYPENVQL 249 >UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Gammaproteobacteria RepID=A4WDI6_ENT38 Length = 582 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 20/172 (11%) Query: 289 LLLIEDPETRLHPIMLSVAWHLL-----NLLPLQRIATTNSGELLSLT-PVEHVCRLVRE 342 ++L E+PE L+P M+ L+ LP Q + ++S ++ L+ P + RLV Sbjct: 310 MVLFEEPELFLYPRMVKELRELIYQVSTEDLPYQVLCASHSSSMIDLSKPKSSIIRLVNN 369 Query: 343 SSRVAAWRLG------PSGLSTEDSRRISFH--IRFNR--PSSLFARCWLLVEGETETWV 392 SS ++++ G++T D + + +RFN S +A LL+EG TE + Sbjct: 370 SSGTKSYQINDQFLKDAKGIATNDELKQEMYEVLRFNPYICESFYADEVLLIEGPTEEII 429 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLV-KFARRMGIEWHVLVDGDEAG 443 ++ + + I V+ P K R I++HV+ D D+AG Sbjct: 430 SRAFLQEVPSN---KTIFVLNCGTVNNIPFYQKIFSRFNIKYHVICDTDKAG 478 >UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepID=Q210V4_RHOPB Length = 695 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 16/158 (10%) Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRL 339 L + D PLLLIE+PE LHP L++ L Q G+ + + H L Sbjct: 304 LAAESDGFPLLLIEEPEAHLHP---QRQLRLMSFLQEQADGVRADGQQIQILVTTHSPNL 360 Query: 340 ---VRESSRV-----AAWRLGP--SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 +R + V A+ +GP + LS D R + + + + FAR ++VEG++E Sbjct: 361 ASDIRLENLVMIEGRKAFPMGPEHTQLSASDYRFLERFLDVTKANLFFARAVMIVEGDSE 420 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR 427 T ++ +AR F G+ ++ GL +FAR Sbjct: 421 TILLPVIARLLDRDFHRYGVSLVNVGGVGLG---RFAR 455 >UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C0_9THEO Length = 376 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 78/319 (24%), Positives = 131/319 (41%), Gaps = 58/319 (18%) Query: 230 YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGL---FATLLQAKGTLRLDKDA 286 ++ M AS+ ++ R +D+ D G + +ILL L +A L+ G ++ Sbjct: 14 FKTMHILASDPNQNRRDIDL-----DELGEGTRNLILLALLRSYAVNLRQYG-----EEI 63 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLT------------ 331 R +L +E+PE LHP + +L + LQ I +T+S + Sbjct: 64 RGILALEEPEIYLHPQAQRNLFRILREIVSTGLQVIISTHSNNFVDTEFFDSIGLVRKVD 123 Query: 332 -PVEHVCR-----LVRESSRVA-AWRLG-PSGLST----EDSRRISFHIRFNRPSSLFAR 379 P C+ LV ++ V +R G P G +T + + + + R N + FAR Sbjct: 124 DPENKGCQHTTLTLVSKAELVEHCYRTGVPEGKATIENITEYYKSTSNYRLNE--AFFAR 181 Query: 380 CWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG---IEWHVL 436 +LVEGETE + E G + D +G+ VI A G + K+ R G I V Sbjct: 182 FLILVEGETEELALPEYLAAVGLNCDQKGVSVI--AVQGKNQIPKYWRLFGKFKIPMLVF 239 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 D D+ G + +N + ++L + L +E ++ + + V EN Sbjct: 240 FDNDDDGVDAKGS-----DNQKRKSNKNLASCFGLQLEQILHGKAWDVV------TSENE 288 Query: 497 PMNLRKIISKAIHRSSKPD 515 P I+ K + K D Sbjct: 289 PATPIVILGKEFETAVKQD 307 >UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Veillonella parvula RepID=D1BNK3_VEIPT Length = 555 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 8/159 (5%) Query: 317 QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS- 375 Q T+S + L + H+ RL R+ + + G++ + + H+ + P + Sbjct: 297 QLFVVTHSTDAL-VDDYRHIIRLYRDENNMVC---AACGVTFNFPKEVEKHLIMHFPEAK 352 Query: 376 --LFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIE 432 L+ARC ++VEGETE ++ G FD GI +I +S + L K R I Sbjct: 353 EALYARCIIIVEGETEYGSFTGFGKKLGVDFDYFGICLINARGESSISKLQKLFNRFSIP 412 Query: 433 WHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 L D D GK A + E + ++ L A+ Sbjct: 413 TVALYDRDVEGKYAKAHSNIFYTQEICFEMDFVSYLLAM 451 >UniRef50_B0VJ98 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ98_9BACT Length = 411 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES-DLYHFERDDF 60 +L+++ I GF+GI L+L L++ NVLIG N+ GKS++L AL LL + S D+ + +D Sbjct: 5 MLKQITIKGFKGITDLTLNLDKINVLIGVNSSGKSTILQALDLLANCASRDVAEYLKDKN 64 Query: 61 W 61 W Sbjct: 65 W 65 >UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNB5_EGGLE Length = 564 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 31/198 (15%) Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP---LQRIATTNSG 325 L +L+A L+L K+ PL I++PE LHP + ++ L Q TT+S Sbjct: 256 LTIAILRAYSKLKL-KNQTPLF-IDEPELYLHPQARRKFYRVIEELADSGTQIFLTTHST 313 Query: 326 ELLSLTPVEHVCRLVRESSRVAAW--RLGPSGLSTEDSRRISFHIRFNR----------- 372 E + L + + LVR+++ + + P + R++ NR Sbjct: 314 EFIDLGNFDQI-YLVRKNAERGTYVRKADPQSFVDDLQNRLNIRTDANRLMLEYRNAFEN 372 Query: 373 -------PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKF 425 LFA LLVEGE+E+ ++ + G +D +GI ++ G L +F Sbjct: 373 TGDSQKAAEGLFASKVLLVEGESESLILPFCFDRIGFDYDGKGISIVRCG--GKNELDRF 430 Query: 426 AR---RMGIEWHVLVDGD 440 R GI +L DGD Sbjct: 431 YRLYSEFGIPCFILFDGD 448 >UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Clostridiales RepID=D1VTS9_9FIRM Length = 656 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 26/195 (13%) Query: 265 ILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIML-SVAWHLLNLLP------LQ 317 LL FA ++ KG + PLL IE+PE+ +HP M + A HL L +Q Sbjct: 331 FLLAAFARDVEKKGDACI-----PLLFIEEPESHMHPQMQHAFAEHLEKFLDKITTVHIQ 385 Query: 318 RIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF---HIRFNRPS 374 TT+S + + + R ++S ++ + E++ + F ++ +R Sbjct: 386 TFLTTHSAHIANTMDFSKI-RYAKKSKSGVVYK-NLDIFARENADNMDFIKKYLTLSRCD 443 Query: 375 SLFARCWLLVEGETETWVINELARQCGHH--FDAEGIK-------VIEFAQSGLKPLVKF 425 FA + VEG +E ++ ++ +C FD+E K +IE + + F Sbjct: 444 LFFADKIIFVEGASERLLLPDMIEKCEKEKLFDSEKYKLPAQYYALIEIGGAYAYKFIPF 503 Query: 426 ARRMGIEWHVLVDGD 440 A +G+ +L D D Sbjct: 504 ADFLGLPCLILTDID 518 >UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1_RHILO Length = 608 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 21/145 (14%) Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRL 339 L +K A ++L E+PE LHP + + L LP Q I TT+S H+ Sbjct: 304 LAQEKSAGQIILFEEPEAHLHPQLQLALFGALKALPFQSILTTHS---------THITSQ 354 Query: 340 VRESSRVAAWRLGPSG-----------LSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 SS V +G +G L D + + + + LFAR +LVEG Sbjct: 355 ADLSSFVVLTNVGVAGTASGVPAENKDLEQNDIADLERFLDATKSNMLFARKVILVEGPA 414 Query: 389 ETWVINELARQCGH-HFDAEGIKVI 412 E ++I L ++ D EGI VI Sbjct: 415 ELFLIPPLVKEVMEIDLDREGIAVI 439 >UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methanosarcina RepID=Q469F9_METBF Length = 650 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 11/168 (6%) Query: 290 LLIEDPETRLHPIMLSVAWHLLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 LLIE+PE LHP + ++ ++ + +Q T++S + + T ++ V L+ S +V Sbjct: 373 LLIEEPEAHLHPQLQNILFNYFKNIESKNIQIFLTSHSPTITAKTDIDTVI-LMENSFKV 431 Query: 347 AAWRLGPSGLSTE-DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 L E D + + + + FA + VEG +E +++ ++ G + Sbjct: 432 DILPLKDIEFEDETDKKYLQRFLDVTKSQLFFANGVIFVEGISEAMLLHIFSKILGIDLE 491 Query: 406 AEGIKVIEFAQSGLKPLVKF------ARRMGIEWHVLVDGDEAGKKYA 447 GI+V+ KP K +++ + +L D DE+ K + Sbjct: 492 KNGIEVVNIGGVAFKPFAKLFNSEHMDKKIKVRAAILSDDDESDGKIS 539 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLS--PESDLYHFER 57 M L+++ + FR IN ++L L NV+IG N GK+SLLD+L L LS S + Sbjct: 28 MYLKKIHVKNFRCINDINLELNSGLNVIIGANNSGKTSLLDSLRLALSIGNYSRSIYVSS 87 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLP 85 +DF+ + + + I LTF E P Sbjct: 88 EDFFV--DEFGKKSQTIEIDLTFSELTP 113 >UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEM8_ANADE Length = 758 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 14/165 (8%) Query: 290 LLIEDPETRLHPIMLSVAWHLLNLLPL--------QRIATTNSGELLSLTPVEHVCRLVR 341 LLIE+PE +HP + + + L+ + Q T++S L S ++ + + R Sbjct: 446 LLIEEPEAHIHPQLQVLVYDFLSRTSVIDDAGNQVQVFVTSHSPTLTSRASLDSLIVMHR 505 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 RV A L L + ++ R LF+R +LVEG +E + LA++ G Sbjct: 506 AEGRVTATALRRCPLDENQKADLRRYLDVTRSQLLFSRAVVLVEGISEALLFPVLAKRAG 565 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKF------ARRMGIEWHVLVDGD 440 + FD ++V+ A P ARR+ I ++ D D Sbjct: 566 YRFDHSAVEVVAVAGVSFAPFAALFNSDEPARRLHIPCALVTDDD 610 >UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BE02_RALP1 Length = 553 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 21/180 (11%) Query: 280 LRLDKDARP-LLLIEDPETRLHPIMLSVAWHLL--------NLLPLQRIATTNSGELLSL 330 L L+K+A L++E+PE LHP + +V L N P+Q T++S +L Sbjct: 249 LSLNKEAAYRALIVEEPEAHLHPQLQAVLLQYLKSVETPAVNENPVQVFVTSHSPNFAAL 308 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRR--ISFHIRFNRPSSLFARCWLLVEGET 388 ++ + + S V L P ++ E ++ + ++ R FAR +LVEG Sbjct: 309 ADIDSISCIYEASEAVGC--LAPREIAFEKRKKEKLQRYLNVTRAEIFFARRIILVEGTA 366 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSGLK-----PLVKFARRMGIEWHVLVDGDEAG 443 E +++ +A + G + VI + GL PL + + V+ DGD G Sbjct: 367 ELFLVEAMAHKLGIDLRKHSVSVI--STDGLNFDAFLPLFG-ETALKVPVAVVTDGDPTG 423 >UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clostridium kluyveri RepID=A5N298_CLOK5 Length = 539 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 57/282 (20%), Positives = 116/282 (41%), Gaps = 41/282 (14%) Query: 289 LLLIEDPETRLHPIMLSVAW---HLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRES 343 +L+IE+PE LHP L+ W +++++ +Q I +T+S E + ++ + R+ +E Sbjct: 269 VLIIEEPEAHLHP--LAQRWLKEYVVDMCSCGIQVIISTHSAEFIDAEYLDGLVRVHKEG 326 Query: 344 SRVAAWRLGPSGL------------STEDSRRISFH---IRFNRPSSLFARCWLLVEGET 388 A +L L I F+ + ++ +FA +LVEG T Sbjct: 327 GVTKAIQLSAQQLCDFCIGSGVPENCVSPENIIDFYSTKLFSDQLKGMFAETIILVEGAT 386 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV-KFARRMGIEWHVLVDGDEAGKKYA 447 E + + ++ G+ G +++ PL + + G + + D D + A Sbjct: 387 EYFALPVYLKRSGYSLAEHGTEIVNCRGKEAIPLYWRLFKAYGYNCYAIFDCD----RNA 442 Query: 448 ATVRSLLNN---DREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + R + N + E + E + D + F F + + ++ + I Sbjct: 443 SKTRDVFNGIFCEEEWDTETENCIVRADYAY------FGKDFESYLRTAIDDYTSMEQTI 496 Query: 505 SKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 S+ H SSKP A +A ++ +P +K + ++L + Sbjct: 497 SEKYHISSKPGKAKAIAQH-----IEEIPHFIKDIADKLLII 533 >UniRef50_C3WB54 ATP-dependent OLD family endonuclease n=3 Tax=Fusobacterium RepID=C3WB54_FUSMR Length = 448 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 14/206 (6%) Query: 245 RYLDIINRMIDRPGGRS-YRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 R +D N + R YR ++ +F +L Q L+L E+PE LHP Sbjct: 164 RIIDTFNELQSEYTSRGLYRNLIFEIFCSLAQYSKKNEHSILENTLILFEEPELYLHPQK 223 Query: 304 ---LSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA--AWRLGPSGLST 358 L +L L Q +T+S ++L + +C +VR+ ++ A++ S Sbjct: 224 QKELFSNICILTKLGNQIYVSTHSNNFINLHMYKSIC-IVRKEEKIGTKAFQFKGYLFSG 282 Query: 359 EDSRRISFHIRFN--RPSSLFARCWLLVEGETETWVINELARQCG-HHFDAEGIKVIEFA 415 ++ + + + N R FA+ +LVEG+T+ V+ L+++ G + +D ++E Sbjct: 283 DEIKNFNMNYWINPDRSEIFFAKKVILVEGQTDKIVLGYLSKRLGIYKYDYS---ILECG 339 Query: 416 QSGLKP-LVKFARRMGIEWHVLVDGD 440 L P +K I + + D D Sbjct: 340 SKSLIPQFIKLLNVFKIPYVAVYDRD 365 >UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHR4_9ACTN Length = 668 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 27/195 (13%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR---------- 338 ++ IE+PE HP+ +L L A+ G++L T + R Sbjct: 382 VVCIEEPEIYQHPVRARAFARVLAAL-----ASQQGGQVLLATHSPYFVRPDQFSSVRRF 436 Query: 339 -LVRESSRVAAWRL-GPSGLSTEDSRRISFHIRFNRPSSL----FARCWLLVEGETETWV 392 LV S+V L G + LS ++ ++ + P+S FA +LVEGET+ V Sbjct: 437 RLVSGVSKVRRTSLAGVAALSGDEEVKVQKILEKRLPTSFSEGFFADAVVLVEGETDKAV 496 Query: 393 INELARQCGHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 + +A G D+ G+ V+E A+ LK + I +V+ DGD G R Sbjct: 497 LEAIAEVLGQPLDSIGVCVLEVSAKDSLKIPYSLFSALEIPTYVIADGDALG-----AAR 551 Query: 452 SLLNNDREAEREHLT 466 + + EA H + Sbjct: 552 TYPDKQNEAANAHAS 566 >UniRef50_B6R3J1 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R3J1_9RHOB Length = 612 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 31/209 (14%) Query: 266 LLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL---LPLQR---- 318 L+GL A L D+ LLI++PE LHP + + + +P Q Sbjct: 170 LVGLLAALYD---------DSVGALLIDEPEVSLHPQLQAFLLKEIKKCSGVPTQDTYKK 220 Query: 319 --IATTNSGELLSLTPVEHV-----CRLVRESSRVAAWRLGPSG--LSTEDSRRISFHIR 369 + +T+S E + LT + + C+ + E R ++ P+ L+ + I Sbjct: 221 LIVISTHSTEFIDLTSISDLPNFVFCQELGEEPR----QISPAENILANRKMSELVTRIG 276 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARR 428 +LFA+ LLVEG +++ + LA + H +A G +++ G P +VK R Sbjct: 277 QEHKLALFAKVPLLVEGPSDSIICGGLANKLDLHIEASGAQLLPVIGKGEFPTVVKLMRL 336 Query: 429 MGIEWHVLVDGDEAGKKYAATVRSLLNND 457 +G + VL D D A A + LN D Sbjct: 337 LGKDPIVLADAD-AFTDDNALSNTFLNCD 364 >UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRV7_9ACTO Length = 531 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 9/169 (5%) Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 ++ ++ I++PET LHP +L Q I T+SG + S +++ + RES Sbjct: 262 NSNGIIAIDEPETHLHPSAQRNLMQVLQSSDRQLIIATHSGVVASEFSPDNIAAM-RESM 320 Query: 345 RVAAWRLGPSGL--STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 A + SG ED + ++ +R L AR + VEG+++ V+ +A G+ Sbjct: 321 PPAQPK---SGFLEGQEDQKMLARWWISSRIELLTARNIIAVEGQSDRMVVERVAELVGN 377 Query: 403 HFDAEGIKVIEFAQSGLKPLVK---FARRMGIEWHVLVDGDEAGKKYAA 448 H +GI+++E P V A G + +L+D D K +A Sbjct: 378 HLKRDGIEILEAGSCNEMPYVMDIFGANGFGKQVSILIDEDAENKTASA 426 >UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropheryma whipplei RepID=Q83GY6_TROWT Length = 545 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 16/200 (8%) Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVR 341 L +DA ++ I++PET LHP + +L Q+I T+S +++ EHV + Sbjct: 279 LSRDAS-VVGIDEPETHLHPTIQRSLARVLQEESNQKIIATHSADIVGAFSPEHVAVVQP 337 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 V R G ED R I+ R L AR + VEG ++ ++ A G Sbjct: 338 NGQVVQPAR----GFLGEDERIIARWWVHGRLEPLTARRIVAVEGISDRIILESAAEVTG 393 Query: 402 HHFDAEGIKVIEFAQSG-LKPLVKFARRMG--IEWHVLVDGDEAG--------KKYAATV 450 + D GI +IE SG + P+ K G I +L+D D K T Sbjct: 394 RNLDRLGIALIEANGSGDMWPIYKLFGPKGFRIPISLLIDSDAVQHTSVRLGIPKNEFTQ 453 Query: 451 RSLLNNDREAEREHLTALPA 470 S+ + R+ E E+ A+ A Sbjct: 454 NSIYVSKRDLEDEYTRAIGA 473 >UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteobacteria RepID=A6SWS1_JANMA Length = 605 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%) Query: 290 LLIEDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRE 342 L++E+PE LHP + +V L L P+Q T++S S ++ + LV Sbjct: 277 LIVEEPEAHLHPQLQAVLLRYLASLQAVAGEKPVQLFVTSHSPNFASNANLDCLACLVES 336 Query: 343 SSRVAAWRLGPSGLSTEDSRR--ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 V + P ++ E +R + ++ R FAR + VEG E +I+ LA Sbjct: 337 EGHVETFF--PRDVTFEKGKREKLERYLDVTRAEIFFARRVIFVEGAAELMLIDALATLA 394 Query: 401 GHHFDAEGIKVI 412 G+ G+ +I Sbjct: 395 GYDLRGHGVSLI 406 >UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaproteobacteria RepID=C4LF54_TOLAT Length = 650 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 19/139 (13%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLP--------LQRIATTNSGELLSLTPVEHVCRLV 340 LLLIE+PE LHP + LLN L +Q + TT+S L S +E + L Sbjct: 301 LLLIEEPEAHLHP---QLQIRLLNHLKKVAEENKNVQVVVTTHSTVLASSVEIEAIIHLS 357 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA--- 397 + VA L GL+ + S+ I+ + + + LFA +LVEG E +I LA Sbjct: 358 KSPVPVAT-PLRTCGLTPDSSKFINRWLDVTKSNLLFASGVILVEGIAEQMLIPILAKIV 416 Query: 398 ----RQCGHHFDAEGIKVI 412 ++ G + GI VI Sbjct: 417 LEDQKEGGKSLEDLGISVI 435 >UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Tax=Proteobacteria RepID=A1TS10_ACIAC Length = 641 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 35/49 (71%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE 49 M + R+EI FRGI +L L Q+ VL+G+N GK+++L+A+ L+L P+ Sbjct: 1 MQVARIEIHNFRGIREATLDLVQHAVLLGDNNTGKTTVLEAMDLVLGPD 49 >UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IU32_9BACE Length = 602 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 40/287 (13%) Query: 290 LLIEDPETRLHPIMLSVAWHLLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 LL+E+PE LHP + + LN L LQ T++S + + + V ++ L R+ S + Sbjct: 324 LLVEEPEAHLHPQYQNTFFEYLNELQSKGLQVFVTSHSPTITAKSDVNNISILQRKQSII 383 Query: 347 AAW---RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH 403 ++ L E R + + + FA LLVEG E +I LA++ Sbjct: 384 QSFSFDELSEDDYPKESKRHLRKFLDTTKAQLFFANGVLLVEGVAEAIIIPILAKK---- 439 Query: 404 FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNND------ 457 F E I+ +SG++ LV + +L + D+ K+ + + ++D Sbjct: 440 FLTEK---IDLCKSGIE-LVNIGGVAFNHFGLLFNNDDERKRLLSKCAIITDSDPKDNGD 495 Query: 458 --------REAEREHL-TALPALDMEHFMYRQG------FSDVFHRMAQIPENVP--MNL 500 ++ E+ +L L +EH ++ Q DV+ ++ +++ N+ Sbjct: 496 ISDRAQKAKDLEKHNLKVCLATHTLEHDLFEQSERNKAIMRDVYRKIHAQTDDLSGDFNV 555 Query: 501 RKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLA 547 ++ K K + A+++ VP +K +L++A Sbjct: 556 STLMKKLKSNKDKAEFALQLCDRLETEVAFDVPDYIK---DAILFIA 599 >UniRef50_A9F4E6 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F4E6_SORC5 Length = 456 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/44 (52%), Positives = 31/44 (70%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLL 45 ++ R+EI GF+ +L LE +VLIG N GKS+LLDAL+LL Sbjct: 12 MITRIEIDGFKSFQGFALDLEPFSVLIGPNGAGKSNLLDALSLL 55 >UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Streptococcus pneumoniae SP6-BS73 RepID=A5LKV6_STRPN Length = 585 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 19/211 (9%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIA-----TTNSGELLSLTPVEHVCRLVRES 343 + LIE+PE LH SV L L +Q I TT+S E+L + ++ + Sbjct: 292 IYLIEEPENSLHR---SVQISLSKQLFVQNIYEYFFLTTHSAEVLYEMDNTQLIKITNQQ 348 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRP--SSLFARCWLLVEGETETWVINELARQCG 401 G S T + + + N+ S+F LLVEG +E ++ + + Sbjct: 349 DAT-----GQSVYYTVPNEFSNLKKKLNKSLAQSIFYDRILLVEGPSEYYLFSAIFEYVS 403 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 +F+A+G +++ KP + + +GI++ + D D + V S + +R + Sbjct: 404 PNFEADGKYLLQVDGINFKPYSELYKALGIDFWIKTDNDLKASRGDKHVFSPIGLNRCID 463 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQI 492 +A P LD YR FS R I Sbjct: 464 LLDHSATPILD----NYRIDFSSKDERKQNI 490 >UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptococcus RepID=B5E5B1_STRP4 Length = 689 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 39/266 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNN--VLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L +V I FR S ++E NN VLIG N+ GK+++L AL+ L S + + ++ Sbjct: 1 MKLTKVIINNFRSFGE-SQIIELNNQTVLIGNNSSGKTTVLQALSKLFSDKQNDRIIKKS 59 Query: 59 DFWFP----PGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 DF P PG+ N R + I F E L G + +T DG + F R+ Sbjct: 60 DFHLPKGSRPGE-NTRNLFIETIFEFDE-LDGTPYSQAIPSFFEHFTVSKDG-AKPFLRI 116 Query: 115 EGESA-ED-----GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI 168 ES+ ED GS+ T ++ D I ED + R + + VL + +R Sbjct: 117 RLESSWEDDGTVEGSIDTQFYYISSDEDTIRDEDKHRAPRKDLDKIRVLYVPASR----- 171 Query: 169 RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA 228 P E+ L+R ++S N ++ +I + + +L + SE GA Sbjct: 172 -------TPEKELGNASGSMLSRLVNS--INWTEDEINEITDKIDELNNTFLSENGA--- 219 Query: 229 RYRLMRRRASNE-QRSWRYLDIINRM 253 + +NE Q+SW NR Sbjct: 220 -----LTQINNEIQKSWELYHEDNRF 240 >UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGE8_9BACT Length = 629 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 116/502 (23%), Positives = 199/502 (39%), Gaps = 76/502 (15%) Query: 1 MILERVEIVGFR--GINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLY-HFE 56 M L +++I FR G L ++ Q NVLIGEN GKS+++DA+ +L+ +S Y + Sbjct: 1 MYLLKLKITNFRKYGDPGLEVIFNQGLNVLIGENESGKSTIIDAVRYILNTQSYEYIRVQ 60 Query: 57 RDDFWFPPGDINGREHHLHIILT-FRESLPGRHRVRRYRPLEACWTPCTDGYHRIF-YRL 114 DF E + T F + G LE W + + + L Sbjct: 61 ETDFHCNQAGNRAEELKIECEFTGFTDQEAGNF-------LE--WLGFDENNNFVLRVWL 111 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP 174 D ++ R+ +D G + AR L+R+ + LRDA Sbjct: 112 SAIIKTDRIIVNTRAGMDDTGTVFE-----SGARDLLRVTYLKPLRDAE----------- 155 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQ----LLEHYFSEQGA----- 225 +E+++ + A+ L SHP L +V+ ++ YF +Q Sbjct: 156 ----IEMSSGRRSRFAQLLKSHPAFQKKPNESHTLEEIVEEADKKIQQYFGQQTGLTIGT 211 Query: 226 --GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL-------------LGLF 270 + +++ S+ DI N+ G IL LG+ Sbjct: 212 KPIEPEGKIIIDEIEQALNSYTSEDIKNKPFVSLSGVELWAILQRLSLQIDKNLPSLGMM 271 Query: 271 ATLLQAKGTLRLDKDARP---LLLIEDPETRLHP-IMLSVAWHLLNLLPL--QRIATTNS 324 L A L L +D L+L+E+ E LHP L+V +L++ Q I TT+S Sbjct: 272 NLLYIAAEFLLLKRDGYTGLKLVLLEELEAHLHPHYQLNVLQYLIDNYNSIGQTILTTHS 331 Query: 325 GELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 L S P+E++ +V + +RV + L D + + + + FA+ ++V Sbjct: 332 VILGSSIPLENM--IVCKGNRVYPMGHDYTMLDQIDYLFLERFLDATKANLFFAKGIIIV 389 Query: 385 EGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR-----MGIEWHVLVDG 439 EG+ E ++ +A G + GI +++ K +R +G+ ++ DG Sbjct: 390 EGDAENLLVPAIADVIGFPLNKYGISLVKVGSKAWKRYANIFQRTDGSGLGMRVAIIADG 449 Query: 440 D----EAGKKYAATVRSLLNND 457 D E KY V +L +N+ Sbjct: 450 DVPCREHLTKYPPKVYTLEDNN 471 >UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) family protein n=2 Tax=Gammaproteobacteria RepID=B1JGZ0_YERPY Length = 682 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 295 PETRLHPIMLSVAWHLLNLLP--------LQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 PE LHP + LL +Q I TT+S L+S +E + + ++ Sbjct: 312 PEAHLHPQLQERVMDLLKEHSNDDQAHKRVQVIMTTHSPSLVSTARIEDLTLV--HKAQT 369 Query: 347 AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDA 406 +G + L D + I + + FAR ++VEG E ++ +A CG F Sbjct: 370 FPLAVGKTKLKRTDYSFLRRFIDATKANLFFARGVMMVEGPAEAILLPAIAEMCGRSFSK 429 Query: 407 EGIKVIEFAQSGLKPLVKFARRMG 430 G+ ++ +GL + +R G Sbjct: 430 HGVSLVNVGNTGLYHYARILQREG 453 >UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillus cereus MM3 RepID=C2PGZ2_BACCE Length = 592 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Query: 292 IEDPETRLHPIML-SVAWHLLNLLPLQRIATTNSGELLS-LTPVEHVCRLVRESSRVAAW 349 IE+PE LHP ++ +LL Q TT+S + S P R+V+ S+ Sbjct: 279 IEEPEAHLHPQQQRKLSSYLLEKFDEQVFITTHSPHIASEFKP----DRIVKLYSKKKCT 334 Query: 350 RLGPSGLSTEDSRRIS-FHIRFNRPSS--LFARCWLLVEGETETWVINELARQCGHHFDA 406 ++ G S E F R + +S F L+EG +E LA+Q D Sbjct: 335 KVAKGGCSEEIKLDFDDFGYRLDAITSDVFFVNAVFLIEGPSEKLFYTALAKQLDIDLDR 394 Query: 407 EGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 + +I G KP +K + I + + D D Sbjct: 395 LNVSIISVNGIGFKPYIKICLALDIPFVLRTDND 428 >UniRef50_C7Q7F6 SMC domain protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q7F6_CATAD Length = 422 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 31/50 (62%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES 50 MI+ R+EI GF+ SL L VLIG NA GKS++LDA+ L + S Sbjct: 1 MIITRIEIDGFKSFVDFSLDLHPFTVLIGANASGKSNVLDAVRFLTTAVS 50 >UniRef50_B1YCD1 SMC domain protein n=3 Tax=Thermoproteaceae RepID=B1YCD1_THENV Length = 349 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%) Query: 2 ILERVEIVGFRGINRLSLM-LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++ +E+ FRG+ S+ N+ +G N GKSS+L+AL + L P+ L + R Sbjct: 8 VVRELEVKNFRGVREGSIKDFAAVNIFVGRNGTGKSSILEALYIALKPDDGLAYVVRRRG 67 Query: 61 WFPPGDINGREHH----LHIILTFRESLPGRHRVRRYRP 95 WF +H +HI T +E +++ P Sbjct: 68 WFGLASAEALFYHGQKEIHISATLKEGKKTELKIKPGMP 106 >UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXK2_9SPHI Length = 631 Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLL---SPESDLYHFE 56 M L +V I F+GI + N++IGEN K++L+DA+ LL +P+ D Y+ Sbjct: 1 MYLSKVHIQNFKGIKSQEFSFDSKLNIIIGENGSHKTALIDAIRLLYNMGNPKKD-YYIS 59 Query: 57 RDDFWF 62 DDF F Sbjct: 60 NDDFHF 65 >UniRef50_Q15Q84 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Q84_PSEA6 Length = 519 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 29/217 (13%) Query: 2 ILERVEIVGFRGINRLSLMLEQN--NVLIGENAWGKSSLLDALTLLLSPESDL---YHFE 56 I++ V+I FR + ++ LE + N+ +G+N GKS+LL AL L + E+DL + F Sbjct: 3 IIKSVQIRKFRSLKSVTKNLEFSDLNIFVGQNDQGKSNLLRALNLFFNNETDLDTRFRFS 62 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 +D+ + G + + I L P + R + +PL WT Sbjct: 63 -EDYCYHSNTGKGTRNEIRIDLVIE---PPKRRFKHAKPLR--WTK-------------- 102 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV 176 +DGS++ R +++ G+ + D Q +R + ++ + + G + +V Sbjct: 103 RWRKDGSIIEERKYIES-GNEVPSRDGVSQWLDKIRYRYIPAIKGQNYFLALM-GELYDV 160 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMV 213 N E A L E S QN++ G I + LS + Sbjct: 161 LN-EAYADILSTQGEEFISGIQNITKG-ITEDLSEQI 195 >UniRef50_A0ZET6 ATP binding protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZET6_NODSP Length = 423 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 1 MILERVEIVGFRGINRLSLMLEQN--NVLIGENAWGKSSLLDALTLLLSP-ESDLYHFER 57 M ++R+++ FRGI L+L QN +LIG N GKSS+++ L +LLS S + H Sbjct: 1 MKVKRLKMQSFRGIGDLTLDFNQNEPTILIGINGVGKSSIIECLAILLSRFTSSIQHSTP 60 Query: 58 DDFWFPPGDINGREHHLH 75 F DI E H Sbjct: 61 SGRLFTEEDITNGEKETH 78 >UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanocaldococcus jannaschii RepID=Y3535_METJA Length = 630 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 26/194 (13%) Query: 282 LDKDARPLLLIEDPETRLHPIML----SVAWHLLNLLPLQRIATTNSGELLSLTPVEHVC 337 + K + LIE+PE LHP + V L N L +Q I T+S + ++ + Sbjct: 301 ISKGKHHIFLIEEPEIHLHPAYIRRLARVLEDLANNLNVQLIIVTHSPDFIATLKDKRFV 360 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS-------------LFARCWLLV 384 VR+ S + P+ L + RI + R +R S LF+ +LV Sbjct: 361 IGVRKDSIKINFEGYPTELL---ATRIFYPFRGSRLSESLARDLGVVPGYFLFSDVAILV 417 Query: 385 EGETETWV----INELARQCGHHFDAEGIKVIEFAQSGLKPLVK-FARRMGIEWHVLVDG 439 EG ++ + I+ L Q + I +I +AQ LK ++K F GI+ ++ D Sbjct: 418 EGNSDRIILQGYIDLLIEQLKNLPKFSYI-IIPYAQRSLKEMIKVFKEDYGIKVFLIADN 476 Query: 440 DEAGKKYAATVRSL 453 DE G K + + Sbjct: 477 DEEGLKNVKIAKDM 490 >UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBW9_DICDC Length = 659 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNV--LIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + ++EI GF+ + + + N+ LIG N GK+++L ALT + +S + D Sbjct: 1 MKITQMEIKGFKSFDNVGQTININSFTSLIGGNGTGKTAVLLALTRMFGVKSSDRIIQVD 60 Query: 59 DFWFPPGD 66 DF+ PPGD Sbjct: 61 DFYVPPGD 68 >UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J729_9BACL Length = 699 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%) Query: 281 RLDKD---ARPLLLIEDPETRLHP-IMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHV 336 RLD + A LLIE+PE LH I ++ N Q + TT+S + S ++ V Sbjct: 335 RLDHEQNKAAHFLLIEEPEAHLHNHIQKTLFQKYHNHENTQILLTTHSSHISSSCSLDSV 394 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 +V + SGL D RRI ++ R + LFA+ +LVEG+ E +I E+ Sbjct: 395 -NIVYLENNCCEVSQPNSGLDENDVRRIERYLDATRSTLLFAKSVILVEGDAELILIPEM 453 Query: 397 ARQC-GHHFDAEGIKVIEFAQSGLKPL 422 + G D G+ +I + + + Sbjct: 454 VKMAFGITLDEIGVSLINVGSTQFENI 480 >UniRef50_D0TBU9 Putative uncharacterized protein (Fragment) n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBU9_9BACE Length = 444 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%) Query: 289 LLLIEDPETRLHP-IMLSVAWHLLNLL---PLQRIATTNSGELLSLT-PVEHVCRLVRES 343 ++L E+PE LHP I + L L P Q + T+S ++ ++ P + R+++ + Sbjct: 193 IILFEEPELFLHPKIAFKLRQSLYELSKNSPYQILCATHSPLMIDISQPHSSLIRVIKNT 252 Query: 344 SR-VAAWRLGPS--GLSTEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINELAR 398 +++G + G E + + RFN + +A LLVEG+TET V +L Sbjct: 253 DEETQTYQVGETLFGRDEEAKKWVQMVNRFNPHICEAFYADKVLLVEGDTETIVYRDL-- 310 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRM----GIEWHVLVDGDEAGKKYAATVRS 452 F E I V+ +G K + F + + IE +++ D D+ KK A T+ + Sbjct: 311 -LNRFFPDEEIFVL---NTGSKMNIPFFQEILTAFHIEHYIIHDSDDKEKKAAWTINT 364 >UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family n=1 Tax=Thermococcus kodakarensis RepID=Q5JGZ5_PYRKO Length = 653 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + +E+ FR + + + L++ VLIG N GKSSLL AL L +P + + +DF Sbjct: 1 MRIVEIEVNNFRSLRAVKMPLDELTVLIGRNGAGKSSLLQALDLFFNPNA---KYSEEDF 57 Query: 61 W 61 + Sbjct: 58 Y 58 >UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria RepID=C0YH13_9FLAO Length = 703 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 6/156 (3%) Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 LLIE+PE +H + ++ L+ Q I +T+S + S + + V + R + Sbjct: 348 FLLIEEPEAHIHTHIQKTLFNNLSKSNTQIIISTHSTHISSASKISSVNVICRGKNEALV 407 Query: 349 WRLGPS-GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDA 406 ++ PS L RR+ ++ R + LFA+ +LVEG+ E +I + G D Sbjct: 408 FQ--PSNNLLPNQIRRLERYLDAVRSNLLFAKGVILVEGDAEQILIPAMFEVVFGLSLDE 465 Query: 407 EGIKVIEFAQSGLKPLVKFARRMGIEWH--VLVDGD 440 G+ +I +G + + I+ + +L D D Sbjct: 466 IGVSLINIGSTGFENVANIFHEERIKKYCAILTDQD 501 >UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A5EBD7_BRASB Length = 610 Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 13/148 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + R++I GFRG ++L ++ VL+G N GK+++++AL LL + + DF Sbjct: 1 MHIIRLKISGFRGARSADILLGRHAVLVGSNNSGKTTIIEALALLFGRDRLVRRLTEHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRV---------RRYRPLEACWTPCTDGYHRIF 111 D R + + F + P H + + P T D H Sbjct: 61 HGSAPDETARIFCIATVTGFTPNDPHHHASWFSPERGVEKWFDPNAMTLTATADAQHTDL 120 Query: 112 YRLEGESA----EDGSVMTLRSFLDKDG 135 G +A E+ T+R F+D + Sbjct: 121 AVQIGFAARFDLEELEAETIRFFVDDEA 148 >UniRef50_UPI0001BC5B9C SMC domain protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC5B9C Length = 366 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 28/43 (65%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLL 45 L R++I G++ I + S+ L + NVLIG N GKS+ + A LL Sbjct: 8 LSRIDISGYKSIKKCSIKLNKINVLIGSNGAGKSNFISAFALL 50 >UniRef50_UPI0000F51745 hypothetical protein Faci_09883 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F51745 Length = 403 Score = 41.6 bits (96), Expect = 0.084, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 33/47 (70%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP 48 +++ + I F+GIN L + ++ NVL+G N GK+S+L+A+++ +P Sbjct: 1 MIKHIAIKNFKGINSLEITPKKFNVLVGRNNTGKTSILEAISVCTNP 47 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobac... 715 0.0 UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate h... 577 e-163 UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadacea... 570 e-161 UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrion... 567 e-160 UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Ga... 556 e-157 UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the O... 555 e-156 UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family pro... 522 e-146 UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1... 489 e-136 UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillu... 486 e-136 UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8... 469 e-130 UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synecho... 458 e-127 UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candida... 445 e-123 UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acineto... 345 2e-93 UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escheri... 335 3e-90 UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteob... 317 8e-85 UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterob... 314 4e-84 UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-lik... 311 3e-83 UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alk... 311 4e-83 UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD ... 310 7e-83 UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepI... 299 2e-79 UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms Re... 295 3e-78 UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafiel... 286 2e-75 UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteob... 286 2e-75 UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea... 284 5e-75 UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwards... 280 1e-73 UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobi... 277 6e-73 UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bactero... 267 6e-70 UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1... 265 4e-69 UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiel... 260 1e-67 UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clo... 257 7e-67 UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldi... 254 6e-66 UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1... 251 6e-65 UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepI... 250 8e-65 UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicu... 249 2e-64 UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostri... 248 6e-64 UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1... 242 3e-62 UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepI... 241 4e-62 UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methano... 238 5e-61 UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacte... 234 9e-60 UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio ... 231 4e-59 UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 T... 230 1e-58 UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteo... 230 1e-58 UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryante... 228 5e-58 UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fi... 220 1e-55 UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralston... 218 4e-55 UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteri... 217 8e-55 UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaprot... 217 9e-55 UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM... 206 1e-51 UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobilun... 199 2e-49 UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropher... 198 4e-49 UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-lik... 191 6e-47 UniRef50_D2U0I2 Putative uncharacterized protein n=1 Tax=Arsenop... 189 3e-46 UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxy... 189 3e-46 UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax... 188 4e-46 UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family... 185 3e-45 UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-lik... 183 1e-44 UniRef50_Q1ZEF5 NADH-ubiquinone oxidoreductase (Fragment) n=2 Ta... 176 2e-42 UniRef50_C3WB54 ATP-dependent OLD family endonuclease n=3 Tax=Fu... 170 1e-40 UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-lik... 168 4e-40 UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Cl... 159 3e-37 UniRef50_B6R3J1 Putative uncharacterized protein n=1 Tax=Pseudov... 134 6e-30 Sequences not found previously or not previously below threshold: UniRef50_B8GG54 SMC domain protein n=1 Tax=Methanosphaerula palu... 227 7e-58 UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bactero... 224 9e-57 UniRef50_B4BQS2 SMC domain protein n=1 Tax=Geobacillus sp. G11MC... 222 3e-56 UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillu... 221 5e-56 UniRef50_A6AAK9 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio ch... 219 2e-55 UniRef50_C3B2Y6 Putative uncharacterized protein n=2 Tax=Bacillu... 216 2e-54 UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria ... 213 2e-53 UniRef50_C2TVV6 Putative uncharacterized protein n=1 Tax=Bacillu... 212 4e-53 UniRef50_B2PZ40 Putative uncharacterized protein n=1 Tax=Provide... 210 1e-52 UniRef50_D1NL89 SMC domain protein n=7 Tax=Bacteria RepID=D1NL89... 210 1e-52 UniRef50_A1VKY5 ATP-dependent endonuclease of the OLD family n=1... 208 5e-52 UniRef50_C3HBD5 Putative uncharacterized protein n=1 Tax=Bacillu... 208 6e-52 UniRef50_A8RV16 Putative uncharacterized protein n=1 Tax=Clostri... 207 9e-52 UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptoc... 206 1e-51 UniRef50_B4ACT9 Possible ATP-binding nuclease n=1 Tax=Enterococc... 204 9e-51 UniRef50_Q73M88 Putative uncharacterized protein n=1 Tax=Trepone... 203 2e-50 UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) fami... 201 4e-50 UniRef50_B4EWQ2 Putative plasmid-related protein n=2 Tax=Gammapr... 201 5e-50 UniRef50_A1VV80 Transcriptional regulator, Fis family n=15 Tax=P... 201 6e-50 UniRef50_B5XVI7 OLD family TOPRIM nucleotidyl transferase/hydrol... 200 1e-49 UniRef50_B9MK40 Putative uncharacterized protein n=1 Tax=Anaeroc... 200 2e-49 UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algorip... 199 2e-49 UniRef50_D1PF96 Putative uncharacterized protein n=1 Tax=Prevote... 198 7e-49 UniRef50_Q5WI68 Putative uncharacterized protein n=3 Tax=Bacillu... 197 9e-49 UniRef50_C7X4G8 SMC domain-containing protein n=1 Tax=Parabacter... 196 3e-48 UniRef50_C2MCD2 RecF/RecN/SMC N domain protein n=2 Tax=Bacteroid... 195 3e-48 UniRef50_C1EJU5 RecF/RecN/SMC N domain protein n=2 Tax=Bacilli R... 195 3e-48 UniRef50_A3VYF2 Putative uncharacterized protein n=1 Tax=Roseova... 195 3e-48 UniRef50_C2FX67 SMC domain protein n=1 Tax=Sphingobacterium spir... 195 3e-48 UniRef50_Q24NG6 Putative uncharacterized protein n=4 Tax=cellula... 193 1e-47 UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ec... 193 1e-47 UniRef50_B5V0C9 ATP-dependent endonuclease of the OLD family n=1... 190 1e-46 UniRef50_C7T9Q2 Putative uncharacterized protein n=1 Tax=Lactoba... 188 5e-46 UniRef50_Q84GD0 Yga2G n=1 Tax=Corynebacterium glutamicum RepID=Q... 188 7e-46 UniRef50_C2NJX4 Putative uncharacterized protein n=1 Tax=Bacillu... 187 8e-46 UniRef50_C0QF29 Putative uncharacterized protein n=1 Tax=Desulfo... 187 9e-46 UniRef50_Q21PB9 ATP-dependent endonuclease of the OLD family n=3... 187 1e-45 UniRef50_A7N6N8 Putative uncharacterized protein n=2 Tax=Vibrion... 186 2e-45 UniRef50_C0WFY9 ATP-dependent OLD family endonuclease n=1 Tax=Co... 184 6e-45 UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candida... 184 6e-45 UniRef50_Q2IEH8 ATP-dependent endonuclease of the OLD family-lik... 184 8e-45 UniRef50_C6D7P9 Putative uncharacterized protein n=1 Tax=Paeniba... 183 2e-44 UniRef50_C7VU27 Putative uncharacterized protein n=1 Tax=Enteroc... 182 4e-44 UniRef50_C2I056 Putative uncharacterized protein n=1 Tax=Vibrio ... 181 6e-44 UniRef50_Q07JA2 ATP-dependent endonuclease of the OLD family-lik... 181 8e-44 UniRef50_C9M1X4 Putative uncharacterized protein n=1 Tax=Lactoba... 177 1e-42 UniRef50_Q6A9G0 Putative uncharacterized protein n=1 Tax=Propion... 176 1e-42 UniRef50_C7PQN7 Plasmid-related protein n=1 Tax=Chitinophaga pin... 176 2e-42 UniRef50_UPI0001746ACF ATP-dependent endonuclease of the OLD fam... 176 2e-42 UniRef50_B9JNX5 Putative uncharacterized protein n=2 Tax=Rhizobi... 175 4e-42 UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paeniba... 172 2e-41 UniRef50_B4BS89 SMC protein-like protein n=1 Tax=Geobacillus sp.... 172 4e-41 UniRef50_A3XJ07 Putative uncharacterized protein n=1 Tax=Leeuwen... 170 1e-40 UniRef50_A7WYC4 Putative uncharacterized protein n=6 Tax=Bacilli... 169 2e-40 UniRef50_Q5NYH6 Putative uncharacterized protein n=3 Tax=Betapro... 169 2e-40 UniRef50_B0A6Q1 Putative uncharacterized protein n=2 Tax=Clostri... 168 5e-40 UniRef50_B1I298 ATP-dependent endonuclease, OLD family protein n... 168 6e-40 UniRef50_A1S4L2 ATP-dependent endonuclease of the OLD family n=1... 168 6e-40 UniRef50_C6PLM4 SMC domain protein n=2 Tax=Thermoanaerobacter Re... 167 1e-39 UniRef50_A0K383 ATP-dependent endonuclease of the OLD family-lik... 167 1e-39 UniRef50_Q2N9H1 Predicted ATP-dependent endonuclease, OLD family... 167 1e-39 UniRef50_D0SCV0 ATP-dependent OLD family endonuclease n=2 Tax=Ac... 166 2e-39 UniRef50_B8DW92 Predicted ATP-dependent endonuclease, OLD family... 166 2e-39 UniRef50_A8SH00 Putative uncharacterized protein n=1 Tax=Faecali... 166 3e-39 UniRef50_B9JB64 Chromosome partition protein n=3 Tax=Alphaproteo... 164 6e-39 UniRef50_A3DGM5 SMC protein-like protein n=1 Tax=Clostridium the... 163 2e-38 UniRef50_C7XKH1 DNA helicase associated protein n=1 Tax=Lactobac... 163 2e-38 UniRef50_A9VNT7 Putative uncharacterized protein n=2 Tax=Bacillu... 161 5e-38 UniRef50_C6WN28 ATP-dependent endonuclease of the OLD family-lik... 161 5e-38 UniRef50_Q6M0D9 Putative uncharacterized protein n=1 Tax=Methano... 161 7e-38 UniRef50_C4B7R0 Putative endonuclease n=1 Tax=Desulfotignum balt... 161 8e-38 UniRef50_C7Q3I3 ATP-dependent OLD family endonuclease n=1 Tax=Ca... 161 8e-38 UniRef50_Q1LEC3 ATP-dependent endonuclease of the OLD family-lik... 160 1e-37 UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphapr... 160 1e-37 UniRef50_B8FVQ2 ATP-dependent endonuclease of the OLD family-lik... 159 2e-37 UniRef50_C9LL80 Putative uncharacterized protein n=1 Tax=Dialist... 159 2e-37 UniRef50_A9L496 ATP-dependent endonuclease of the OLD family-lik... 159 2e-37 UniRef50_B9MK32 ATP-dependent OLD family endonuclease n=2 Tax=Cl... 159 2e-37 UniRef50_A9C2Y9 ATP-dependent endonuclease family protein n=3 Ta... 159 3e-37 UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Ta... 159 3e-37 UniRef50_C8SCF2 SMC domain protein n=1 Tax=Ferroglobus placidus ... 159 3e-37 UniRef50_Q5JHA7 Predicted ATP-dependent endonuclease, OLD family... 158 4e-37 UniRef50_B2GJX2 Putative uncharacterized protein n=1 Tax=Kocuria... 158 4e-37 UniRef50_B8FV59 ATP-dependent endonuclease of the OLD family-lik... 158 4e-37 UniRef50_C4FPP4 Putative uncharacterized protein n=1 Tax=Veillon... 158 6e-37 UniRef50_A5FDQ0 ATP-dependent endonuclease of the OLD family-lik... 156 2e-36 UniRef50_Q2BBA4 Predicted ATP-dependent endonuclease of the OLD ... 156 2e-36 UniRef50_A7JZX6 Pathogenesis related protein n=4 Tax=cellular or... 156 2e-36 UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Strepto... 156 2e-36 UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanoc... 156 3e-36 UniRef50_D2RJW4 ATP-dependent endonuclease of the OLD family-lik... 155 5e-36 UniRef50_A8FWW1 ATP-dependent endonuclease of the OLD family n=3... 154 8e-36 UniRef50_Q3B1R7 ATP-dependent endonuclease of the OLD family-lik... 154 1e-35 UniRef50_B0QUR6 Predicted ATP-dependent endonuclease of the OLD ... 154 1e-35 UniRef50_A4AD51 Predicted ATP-dependent endonuclease, OLD family... 153 1e-35 UniRef50_C7PFH0 ATP-dependent endonuclease, OLD family n=1 Tax=C... 153 1e-35 UniRef50_B4S792 ATP-dependent endonuclease of the OLD family-lik... 153 2e-35 UniRef50_A3Y2D0 Predicted ATP-dependent endonuclease, OLD family... 153 2e-35 UniRef50_Q11KX7 ATP-dependent endonuclease of the OLD family-lik... 152 3e-35 UniRef50_Q1WRW0 Putative uncharacterized protein n=1 Tax=Lactoba... 151 8e-35 UniRef50_A9G4V7 Putative old protein n=1 Tax=Sorangium cellulosu... 151 1e-34 UniRef50_B0P4C0 Putative uncharacterized protein n=1 Tax=Clostri... 150 2e-34 UniRef50_UPI0001BC7DE3 hypothetical protein BacD2_01103 n=1 Tax=... 149 2e-34 UniRef50_Q0HJ47 ATP-dependent endonuclease of the OLD family-lik... 149 3e-34 UniRef50_C9RMQ8 Putative uncharacterized protein n=1 Tax=Fibroba... 149 3e-34 UniRef50_A6Y4R5 Putative uncharacterized protein n=1 Tax=Vibrio ... 149 3e-34 UniRef50_C0XXA7 ATP-dependent endonuclease, OLD family n=2 Tax=B... 149 4e-34 UniRef50_Q64X74 Putative uncharacterized protein n=1 Tax=Bactero... 148 5e-34 UniRef50_Q3IKC8 Putative orphan protein n=3 Tax=Bacteria RepID=Q... 148 6e-34 UniRef50_Q8PTL3 Putative uncharacterized protein n=1 Tax=Methano... 148 7e-34 UniRef50_B7H4E2 Overcoming lysogenization defect protein n=1 Tax... 148 8e-34 UniRef50_B2KB28 ATP-dependent endonuclease of the OLD family n=1... 146 2e-33 UniRef50_A6BKR5 Putative uncharacterized protein n=2 Tax=Bacteri... 146 3e-33 UniRef50_Q138G7 ATP-dependent endonuclease of the OLD family-lik... 145 3e-33 UniRef50_B5EKT6 ATP-dependent endonuclease, OLD family n=1 Tax=A... 144 1e-32 UniRef50_B4B934 ATP-dependent endonuclease of the OLD family-lik... 144 1e-32 UniRef50_A3ELC8 Putative uncharacterized protein n=1 Tax=Vibrio ... 143 1e-32 UniRef50_C7NQX8 SMC domain protein n=1 Tax=Halorhabdus utahensis... 143 1e-32 UniRef50_A4J2V4 ATP-dependent endonuclease of the OLD family-lik... 142 5e-32 UniRef50_A5VKD5 AAA ATPase n=4 Tax=Lactobacillus reuteri RepID=A... 141 5e-32 UniRef50_C5T1P1 Putative uncharacterized protein n=1 Tax=Acidovo... 141 7e-32 UniRef50_C7RGV9 Overcoming lysogenization defect protein n=6 Tax... 140 1e-31 UniRef50_C1DUM9 ATP/GTP-binding protein n=1 Tax=Sulfurihydrogeni... 140 1e-31 UniRef50_A6X3P4 ATP-dependent endonuclease, OLD family protein n... 140 1e-31 UniRef50_B2VB80 Predicted ATP-dependent endonuclease of the OLD ... 140 1e-31 UniRef50_Q19NH8 ATP/GTP-binding protein n=6 Tax=Enterobacteriace... 139 2e-31 UniRef50_A1SC11 SMC domain protein n=2 Tax=Actinomycetales RepID... 139 2e-31 UniRef50_A9HWQ9 Putative uncharacterized protein n=3 Tax=Proteob... 139 3e-31 UniRef50_B7GJZ0 Predicted ATP-dependent endonuclease of the OLD ... 139 3e-31 UniRef50_C6BF20 ATP-dependent OLD family endonuclease n=1 Tax=Ra... 138 5e-31 UniRef50_D1RHV6 Putative uncharacterized protein n=1 Tax=Legione... 138 5e-31 UniRef50_D1B1K9 Putative uncharacterized protein n=2 Tax=Proteob... 138 6e-31 UniRef50_A9BIN7 ATP-dependent endonuclease of the OLD family n=3... 138 6e-31 UniRef50_Q935U7 Putative ATP/GTP-binding protein n=1 Tax=Strepto... 137 9e-31 UniRef50_A9AVV6 ATP-dependent endonuclease of the OLD family-lik... 135 4e-30 UniRef50_A6WMH3 Putative uncharacterized protein n=5 Tax=Gammapr... 135 4e-30 UniRef50_UPI0001B42A75 SMC domain protein n=1 Tax=Listeria monoc... 135 4e-30 UniRef50_Q0SWM6 Putative uncharacterized protein n=1 Tax=Clostri... 133 2e-29 UniRef50_UPI0001694BEA putative old protein n=1 Tax=Paenibacillu... 133 2e-29 UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family... 133 2e-29 UniRef50_B2DN28 RecF/RecN/SMC N domain protein n=2 Tax=Streptoco... 133 2e-29 UniRef50_UPI0001BC2E28 plasmid-related protein n=1 Tax=Brevibact... 132 2e-29 UniRef50_D2UFF3 Putative uncharacterized protein n=1 Tax=Xanthom... 132 3e-29 UniRef50_B4SKF9 OLD family ATP-dependent endonuclease-like prote... 132 3e-29 UniRef50_C7NT09 ATP-dependent endonuclease of the OLD family-lik... 132 3e-29 UniRef50_B0SBA1 ATP-dependent endonuclease n=2 Tax=Leptospira bi... 131 1e-28 UniRef50_B1KR76 Putative uncharacterized protein n=3 Tax=Gammapr... 130 1e-28 UniRef50_A5TT00 Possible ATP-dependent endonuclease n=12 Tax=Fus... 129 2e-28 UniRef50_Q7N8W7 Similar to unknown protein n=10 Tax=Bacteria Rep... 129 2e-28 UniRef50_B0S1X8 Putative uncharacterized protein n=3 Tax=Firmicu... 129 2e-28 UniRef50_D1SMA1 ATP-dependent endonuclease of the OLD family-lik... 129 3e-28 UniRef50_C0E1U9 Putative uncharacterized protein n=1 Tax=Coryneb... 128 7e-28 UniRef50_Q3EQP6 Putative uncharacterized protein n=3 Tax=Bacillu... 127 7e-28 UniRef50_A8T0E4 Putative uncharacterized protein n=1 Tax=Vibrio ... 127 8e-28 UniRef50_C1QGC1 RecF/RecN/SMC N-terminal domain-containing prote... 127 1e-27 UniRef50_Q7WY48 Pathogenesis-related protein n=5 Tax=Proteobacte... 127 1e-27 UniRef50_Q1D0Z7 Putative uncharacterized protein n=1 Tax=Myxococ... 126 2e-27 UniRef50_B3Z268 Putative uncharacterized protein n=2 Tax=Bacillu... 126 2e-27 UniRef50_Q8DF42 Predicted ATP-dependent endonuclease of the OLD ... 126 2e-27 UniRef50_UPI000197320E hypothetical protein ClM62_07685 n=1 Tax=... 126 3e-27 UniRef50_D0TBU9 Putative uncharacterized protein (Fragment) n=1 ... 126 3e-27 UniRef50_C0BU00 Putative uncharacterized protein n=1 Tax=Bifidob... 124 6e-27 UniRef50_D0GPM5 Putative uncharacterized protein n=1 Tax=Leptotr... 124 7e-27 UniRef50_A9KJX6 ATP-dependent endonuclease of the OLD family-lik... 124 8e-27 UniRef50_C6X564 Putative uncharacterized protein n=1 Tax=Flavoba... 124 1e-26 UniRef50_A2SK58 ATP-dependent endonuclease of the OLD family-lik... 124 1e-26 UniRef50_Q4JUU2 Putative uncharacterized protein n=2 Tax=Coryneb... 123 2e-26 UniRef50_D2LK58 Putative uncharacterized protein n=1 Tax=Rhodomi... 123 2e-26 UniRef50_C7VQS3 Putative uncharacterized protein n=1 Tax=Enteroc... 123 2e-26 UniRef50_UPI0001C33FD4 hypothetical protein CATC2_18455 n=1 Tax=... 123 2e-26 UniRef50_B2SJS5 Putative uncharacterized protein n=2 Tax=Xanthom... 122 3e-26 UniRef50_A6LLZ6 ATP-dependent endonuclease of the OLD family-lik... 122 3e-26 UniRef50_UPI0001C41A1B RecF/RecN/SMC N terminal domain-containin... 122 3e-26 UniRef50_UPI0001B4CEC2 SMC domain-containing protein n=1 Tax=Str... 122 4e-26 UniRef50_Q2SV15 Putative uncharacterized protein n=1 Tax=Burkhol... 122 5e-26 UniRef50_B1R423 Putative uncharacterized protein n=1 Tax=Clostri... 121 7e-26 UniRef50_UPI0001BC8A63 hypothetical protein PsyrptA_24648 n=2 Ta... 121 8e-26 UniRef50_B7BHI3 Putative uncharacterized protein (Fragment) n=1 ... 121 8e-26 UniRef50_C7P8D3 SMC domain protein n=1 Tax=Methanocaldococcus fe... 120 1e-25 UniRef50_Q1RFS3 Putative uncharacterized protein n=2 Tax=Bacteri... 120 2e-25 UniRef50_UPI0001873D90 hypothetical protein PSPTOT1_4227 n=1 Tax... 119 2e-25 UniRef50_Q65SR3 Putative uncharacterized protein n=1 Tax=Mannhei... 119 3e-25 UniRef50_C3I020 Putative uncharacterized protein n=1 Tax=Bacillu... 118 5e-25 UniRef50_A1VWE3 Putative uncharacterized protein n=3 Tax=Burkhol... 118 5e-25 UniRef50_C4XSY5 Putative uncharacterized protein n=1 Tax=Desulfo... 118 7e-25 UniRef50_C0N1Y3 Putative uncharacterized protein n=1 Tax=Methylo... 117 9e-25 UniRef50_C4TV98 Putative uncharacterized protein n=2 Tax=Gammapr... 117 1e-24 UniRef50_UPI0001C42FF5 hypothetical protein BpOF4_21974 n=1 Tax=... 117 1e-24 UniRef50_Q8E4Q9 Putative uncharacterized protein gbs1342 n=2 Tax... 116 2e-24 >UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobacteriaceae RepID=YBJD_ECOLI Length = 552 Score = 715 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF Sbjct: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE Sbjct: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE Sbjct: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE Sbjct: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH Sbjct: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 Query: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED Sbjct: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK Sbjct: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 Query: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ Sbjct: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 Query: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF Sbjct: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 Query: 541 SRVLWLARGRAD 552 SRVLWLARGRAD Sbjct: 541 SRVLWLARGRAD 552 >UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate hydrolase domain n=8 Tax=Vibrionaceae RepID=Q5E0I1_VIBF1 Length = 544 Score = 577 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 232/558 (41%), Positives = 341/558 (61%), Gaps = 21/558 (3%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 1 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFTLKDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT-DGYHRIFYRLEGESA 119 ++ H+ II+T++ + H+ RYR L + W RI+YR+ + Sbjct: 61 HQDHSISYTQDQHIQIIITWQTTEKNEHKAGRYRKLSSLWQHDANSNTQRIYYRVSA-TN 119 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + + SFLDKDG+ + I L++L PV+R+RD+R R+ G + Sbjct: 120 NDGKITSSSSFLDKDGNVLRYHRIECLVYELIKLHPVIRIRDSR---RLSPGPFTDHVPD 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + R+++ R L + P +S G+I+ L +M L++HYFS +R RR + Sbjct: 177 DRIERRINNTCRRLLTAPGQVSSGEIKSALQSMQSLVDHYFS--------FRNHRRHGQH 228 Query: 240 EQRSWRYLD------IINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 + R + +N+ +++ + +++LLGL T L+AKG L + ARP++++E Sbjct: 229 KVRDDLFFGQKAEGVSLNQFVNQNQSKQTKLLLLGLLNTYLRAKGPNTLKQSARPVMIVE 288 Query: 294 DPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 DPE RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES +++ L P Sbjct: 289 DPEGRLHPTQLIQAWTLLNHIPMQKILTTNSSELLSAVPLSSIRRLVRESDSTSSYALTP 348 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 + LS +D RRI+FHIRF R ++LFARCWLLVEGETE W+ NE+AR G++ AEG+++IE Sbjct: 349 TSLSRDDLRRITFHIRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGVQIIE 408 Query: 414 FAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 FAQSGLK L+K A+ + IEWHV+ DGD AGKKYA V++ L N E ER LT LP D+ Sbjct: 409 FAQSGLKSLIKMAKALHIEWHVVTDGDPAGKKYAFAVKNQLEN--EHERHRLTELPHKDI 466 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVP 533 EH++Y GF ++F ++ I + P+ +KII K + + +KPD+A+ + G +S+P Sbjct: 467 EHYLYHHGFEELFRTLSNISADQPVPPKKIIVKTLKKYAKPDVALAIVEHCEEMGPESIP 526 Query: 534 TLLKKMFSRVLWLARGRA 551 LL+ R + +A+G+ Sbjct: 527 LLLRWTLKRTVTMAKGQG 544 >UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadaceae RepID=A0KKW1_AERHH Length = 545 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 248/552 (44%), Positives = 346/552 (62%), Gaps = 8/552 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+ GFRGINRLSL L+ VLIGENAWGKSSLL AL LL +++ Y F DDF Sbjct: 1 MFLERIEVKGFRGINRLSLGLDNTTVLIGENAWGKSSLLRALWCLLGQDAEPYQFSSDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRH-RVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 P HL ++LTF E P RR L A W D +HRI YR E Sbjct: 61 HQPEDPELEPARHLQLVLTFSEHRPQMCLHSRRLARLGAAWVKHKDKFHRIHYRASAELQ 120 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG+V T FLD G + ++D ++ L+ + PV RLRDAR R V + Sbjct: 121 SDGTVTTTHDFLDGIGKSLPIDDAHELVCLLITMNPVFRLRDARTARNG----VETLQWG 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 +++ +L LA +L PQ + + ++++ L A+ QL++HYF+ + + R +R N Sbjct: 177 DLSEHRLSELADKLIDEPQRIGEPELKEALQAVRQLMDHYFNALAPIKNKPRS-QREIVN 235 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + R + ++ R+ ++ + G+ ATLLQA+G L++ ARP++++EDPE+RL Sbjct: 236 RPMTLRNPGNLQALLRNADNRALQLAMAGMAATLLQARGNRELEQGARPIMILEDPESRL 295 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP ML++AW LL LP Q++ TTNSG+LLS P+ + RLVR + +LG S++ Sbjct: 296 HPTMLALAWGLLEQLPGQKLLTTNSGDLLSSLPLNQIRRLVRRQQDIVCHQLGGERYSSD 355 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D R+I+FH+R NRP S+FARCWLLVEGETE W+++ELA+ CG+ AEG+++IEFAQ G Sbjct: 356 DLRKIAFHVRINRPMSMFARCWLLVEGETEIWLLSELAQICGYSLRAEGVRIIEFAQCGQ 415 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 PL+K AR GIEWH+L DGDEAG KYA + RSLL +R ER+ LT LPA D+EH++Y Sbjct: 416 SPLIKVARDFGIEWHLLTDGDEAGVKYATSARSLLKGER--ERDRLTQLPAADIEHYLYH 473 Query: 480 QGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 GF VF R A + +N +II+KAIH SKP +A+ V EA R G + +P +L++M Sbjct: 474 NGFEAVFRREAGVGGRSTLNAGRIINKAIHHRSKPGMALAVVEEAERLGGEHIPPVLRQM 533 Query: 540 FSRVLWLARGRA 551 F+RV+ LARG+ Sbjct: 534 FARVVALARGQG 545 >UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=B6ER73_ALISL Length = 554 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 236/554 (42%), Positives = 339/554 (61%), Gaps = 13/554 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 11 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFSLTDF 70 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG-YHRIFYRLEGESA 119 ++ H+ II+TF+ + +R RYR L + W P + RI+YR+ + Sbjct: 71 HQDHSISYTQDQHIQIIITFQTTEKNEYRAGRYRKLASLWQPDENSHAQRIYYRISA-TN 129 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + SFLD G + I+ L+RL PV+R+RDAR R +G +P+ Sbjct: 130 NDGKITASHSFLDNKGRILRYHKIHMLVYELIRLHPVIRIRDAR--RLHPDGDTAPLPDD 187 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + R+++ R L + P +S G+I+ L +M L+EHYF A + R + R + Sbjct: 188 RI-ERRINNTCRRLLTSPGQVSSGEIKSALHSMQALVEHYF----AFKNHNRHTQHRIHD 242 Query: 240 EQRSWRYLDIIN--RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + + + I+ + I++ + +++LLGL T L+AKG L ARPL+++EDPE Sbjct: 243 DLFFGQKTEGISLTQFINQNKSKQTKLLLLGLLNTYLRAKGPNVLKPSARPLMIVEDPEG 302 Query: 298 RLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES + + + P+ LS Sbjct: 303 RLHPTQLIQAWTLLNHIPMQKILTTNSSELLSTVPLCSIRRLVRESDSTSCYSVSPTCLS 362 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 +D RRI+FH+RF R ++LFARCWLLVEGETE W+ NE+AR G++ AEGI++IEFAQS Sbjct: 363 KDDLRRITFHVRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGIQIIEFAQS 422 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GLK L+K A+ + IEWHV+ DGD AGKKYA V+S L+N E +R LT LP D+EH++ Sbjct: 423 GLKSLIKIAKTLHIEWHVVTDGDPAGKKYAFAVKSQLDN--EHQRHRLTELPHKDIEHYL 480 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 Y GF +F ++ + P+ +KII K + + +KPDLA+ + G +S+P LL+ Sbjct: 481 YHHGFEPLFRELSNTSVDQPVPPKKIIIKTLKKYAKPDLALAIVQYCEDNGPESIPLLLR 540 Query: 538 KMFSRVLWLARGRA 551 R L +A+G+ Sbjct: 541 WTLKRTLTMAKGQG 554 >UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Gammaproteobacteria RepID=B7VSG7_VIBSL Length = 590 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 233/593 (39%), Positives = 334/593 (56%), Gaps = 49/593 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI R+SL ++ LIGEN WGKSSLLDAL+++L + YHFE DF Sbjct: 1 MQLERIEISGFRGIKRMSLAFDELTTLIGENTWGKSSLLDALSVVLPSDGVPYHFEMTDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + HL I+L + + RYR L+ W G RI+YR+ + E Sbjct: 61 HVDYSVSHPQSQHLQIVLALKANDKSELNAGRYRKLKPVWVQDEFGVFRIYYRISA-TLE 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN----- 175 T +FL DG+P+ + ++ L+ L PV+RLRDAR R NG N Sbjct: 120 QYETTTHYAFLGLDGNPLKLHHSEKLSQELMTLHPVIRLRDARHFDRPFNGNSLNHNAHL 179 Query: 176 ---------------------------------------VPNVEVTARQLDFLARELSSH 196 +++D R L + Sbjct: 180 PGNVHTNTVHASNGHANNVSGNGNGQSQTTNGNGSNGNGNGRQARIEKRIDNTCRRLMAI 239 Query: 197 PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR 256 P +++ G++R L +M L+EHYFS + + R R + I+++++ Sbjct: 240 PGHVNKGEMRSSLESMQSLIEHYFSFKSVSRKNPRKPRD--GLLYSAGANDKSIHQLVEE 297 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL 316 + R++ +GL LQAKG L + ARPLL++EDPE RLHP L+ AW L+ LP+ Sbjct: 298 TKNKQTRLLFMGLLNAYLQAKGPNDLRRCARPLLILEDPEGRLHPTHLARAWSLMQKLPM 357 Query: 317 QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSL 376 Q+I TTNSG+LL+ P++ + RLVR+S + A +L + S ++ RRI FHIRF+R +L Sbjct: 358 QKILTTNSGDLLAAVPLQSIRRLVRQSDKTIANQLNVNHFSKDELRRIGFHIRFHRSGAL 417 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVL 436 +ARCWLLVEGETE W+ NELA QCG++ AEG+++IEFAQSGLK L+K A+ GI+WHV+ Sbjct: 418 YARCWLLVEGETEVWLFNELANQCGYNLAAEGVQIIEFAQSGLKALIKVAQEFGIDWHVV 477 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 DGD AGKKYAATV S L ND+ ER LT LP D+EH++Y GF + F M +IP + Sbjct: 478 TDGDAAGKKYAATVLSKLGNDQ--ERHRLTELPDRDIEHYLYMNGFENFFRDMVKIPYDH 535 Query: 497 PMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 P+ +K+++K + + +KPDLA+ + +G D +P LL+ RV+ +A G Sbjct: 536 PIPAKKVVAKVLKKHAKPDLALAIVSHCENQGQDCIPLLLRWTLKRVITMANG 588 >UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the OLD family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F9_LISDA Length = 566 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 229/571 (40%), Positives = 348/571 (60%), Gaps = 29/571 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ +VLIGENAWGKSSLLDAL++ LSP++ Y+F+ DF Sbjct: 1 MHLERIEISGFRGIKRLSLTFDELSVLIGENAWGKSSLLDALSIALSPDAQFYNFKFSDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 N + L IIL ++E G H RRY+ E W + H ++Y++E E Sbjct: 61 HVDYTLGNKKMTQLQIILHWKEDAEGEHIARRYKGFERFWVLKHNIRH-LYYQIES-VIE 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP------ 174 + V+T R FL+ G I ++ + + + L PV+RLRDAR +R + P Sbjct: 119 NDKVITYRRFLNHHGREIHCDENDRMIKRWMVLHPVVRLRDARRLRYYDDENKPLHDSND 178 Query: 175 ----------------NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 N ++LD R L + P +++ G+++ + A+ L++H Sbjct: 179 HEQLQTNGHSDNHVNGNAQQEARIQKRLDNTCRRLMTQPGHVNSGELKSSIKALHSLVDH 238 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 YF+ A R R RA + ++I + + +++LLGL ++A+G Sbjct: 239 YFA--FAPHQRQRNFN-RAHFPSFAQYAEHPFEQLIPKNLSKQNQLVLLGLLNAFIRARG 295 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 + L + +RP+L++EDPE RLHP +L AW ++ +P+Q+I TTNS ELLS P++ + + Sbjct: 296 PVSLKRLSRPILIVEDPEGRLHPTILQQAWSFISSMPMQKILTTNSPELLSSVPLQSIKK 355 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L+R++ R + +G L +++RR+SFH+R +RPS+LFAR WLLVEGETE W+ NELAR Sbjct: 356 LIRQADRTQVFEVGKRTLGKDETRRVSFHVRLHRPSALFARAWLLVEGETEVWLFNELAR 415 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDR 458 CG++ AEG+++IEFAQSGL+PLVK AR +GIEWH++ DGD AG+KYA TVR++L D Sbjct: 416 YCGYNLAAEGVQIIEFAQSGLRPLVKIARSLGIEWHLISDGDMAGRKYAETVRNMLGTD- 474 Query: 459 EAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAI 518 AER LT LP D+EH++Y QG+ +F +++ I + P+N KII +A+ R +KPD+A+ Sbjct: 475 -AERHRLTVLPDRDIEHYLYNQGYEALFKQLSGIQGDAPINAHKIIQRALKRHAKPDVAL 533 Query: 519 EVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 + VD VP L++ + R++ ++RG Sbjct: 534 AIVEYTHEGKVDEVPLLIRWLLKRIVAMSRG 564 >UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family protein n=2 Tax=Psychromonas RepID=A1SRF4_PSYIN Length = 558 Score = 522 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 213/566 (37%), Positives = 324/566 (57%), Gaps = 24/566 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+L+++E+VGFRGINRLS+ ++ + +GEN+WGKSSL DAL+L LS Y F DDF Sbjct: 1 MLLDQIEVVGFRGINRLSINVKSLSAFLGENSWGKSSLFDALSLFLSGTKKAYKFTGDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P +H++ TF+E G R+Y+ + A W I+Y+++G E Sbjct: 61 HRPSISDVSCNKLIHLVFTFKEQANGESLQRQYKSISAAWNLPKGECSYIYYQVDGSITE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDI--NDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 G+++T R FLD G + + + +P LR+ R + T + + Sbjct: 121 SGNIITQRYFLDNHGQKKSFKKDVLANLVNEFISFVPALRMGSERSLMV----TAEDTGD 176 Query: 179 VEVTARQLDFLAR------ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 VE +++ AR L+ Q LS+ +++ G A+V L +HY + R Sbjct: 177 VEYCSKRASCEARIKRIFKRLNKSSQQLSESEMKMGYQALVYLFDHYLLKH---YGRSHF 233 Query: 233 MRRRASNEQ-----RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 R A N+ S++ L N ++ + G +S R +LL + L+ +G L + A Sbjct: 234 HRGDAQNDTKGQMPFSFQALTHFNDLL-KTGHKSDRAMLLLVLGEFLEVRGEHLLRRGAT 292 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 P+LL+E+PE LHP+ L++ W +LLP+Q++ +TNS +LLS P+ V RLVR + Sbjct: 293 PILLLEEPENNLHPVNLAITWRFFSLLPMQKLVSTNSSQLLSFLPLSCVQRLVRCTGLTQ 352 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 ++ L S D RR++FHIR RP SLFAR WLLVEGETETW++ EL+R CG++ E Sbjct: 353 SYSLNLKHFSQNDLRRVAFHIRMTRPQSLFARSWLLVEGETETWLLTELSRLCGYNLVVE 412 Query: 408 GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 G++++EFAQ G+ PL+K A+ + IEW VL DGD AG+KYAA V +L +++ L Sbjct: 413 GVQILEFAQCGVAPLIKLAQDLHIEWFVLTDGDAAGQKYAARVAEML-LVKDSLVNRLVV 471 Query: 468 LPALDMEHFMYRQGFSDVFHRMAQIPENV--PMNLRKIISKAIHRSSKPDLAIEVAMEAG 525 LPALD+EH + GF++V+ A E + KII KA+H+ SKP+L + +A Sbjct: 472 LPALDIEHLFFDHGFANVYLEAAHYTEKDLARITTHKIIDKAVHKYSKPELGLAIANAVE 531 Query: 526 RRGVDSVPTLLKKMFSRVLWLARGRA 551 RG DS+P LLK++FSR++ LAR ++ Sbjct: 532 ERGTDSIPPLLKRLFSRLVGLARSQS 557 >UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ67_ACIBL Length = 566 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 175/550 (31%), Positives = 272/550 (49%), Gaps = 12/550 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L V + FRGI R + ++ VLIGEN GKS +++AL L+L+ S + FE F Sbjct: 1 MQLHSVLVENFRGIRRAEVSFSRDTVLIGENDSGKSRVIEALCLVLNSSSGIIPFEPCHF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P + N + I +TF E G Y+P+++ P + + + SA+ Sbjct: 61 CVPVEEANQFSVPIRITITFAERHKGEWSSATYQPIQSLLAPESSRQRELRLEVHAASAD 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + +R F G + + + + P++RL + RNG V N ++ Sbjct: 121 --AKPRIRFF--SSGGALAGSESPELLAWVRANNPIIRLEQGLLNQGGRNGPVRN-KEIQ 175 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL--LEHYFSEQGAGQARYRLMRRRAS 238 + +D L + + G A L L + A + + L S Sbjct: 176 SYSDLVDRHYAALVGGASTNATLDLEAGFKAAQTLVALSSQHLDANARRTNWLLEEIAGS 235 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + S R+ + + P G SY++ LL LL+A DA P+++ EDPE Sbjct: 236 TLKLSSRFAN--DSTSAPPSGNSYKIGLLLFVGALLRAHSQ-PFGPDAEPIVIFEDPEAH 292 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 LHP+ L+ W L+ + Q I +T+SG LL+ P+ + RL+R + + R+ L+ Sbjct: 293 LHPLTLASVWSLIERMRWQTIVSTHSGVLLTEAPLHSIRRLIRVNDEIIVHRVRDRALTK 352 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 D R+ +H+R R +++FARCWLLVEGETE W++ ELAR G++FDAEGI +EFAQ G Sbjct: 353 TDMRKFRYHVRSRRGAAMFARCWLLVEGETEFWLLPELARLLGYNFDAEGISCVEFAQCG 412 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 + PLVK AR +GIEWH+L DGD +G Y+AT + R +T L D+EH + Sbjct: 413 IPPLVKAARELGIEWHLLTDGDNSGAIYSATAGRFCGPNELPTR--ITRLREPDIEHCFW 470 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 G+++ ++A + N R II AI +SSKP LA+++ G VP LK+ Sbjct: 471 HSGYANAILKLAGRTSSSRPNPRWIIRAAIDKSSKPYLALQLLEAVASSGSAGVPPALKR 530 Query: 539 MFSRVLWLAR 548 + + +AR Sbjct: 531 VIESCVRMAR 540 >UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillus minor RepID=C5S1H4_9PAST Length = 519 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 206/550 (37%), Positives = 292/550 (53%), Gaps = 36/550 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ VEI GFRGIN L L L N VLIGEN WGKSSLL AL+ + S +LY F +DF Sbjct: 1 MYLKFVEIHGFRGINSLFLKLRPNMVLIGENTWGKSSLLGALSTIFSSSDELYQFTENDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 G + + + TF E HR +P + G H + + GE Sbjct: 61 HVEFGSQPKKHPQIRLRFTFCEERENEHREAELKPCRGLFINDDKGLHYLHLEVFGER-N 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 +G V T F ++ I E+ + R+L++ PV RLRDAR + I Sbjct: 120 NGEVTTHYRFTNERHRVISCENEQEVIRYLIQRHPVYRLRDARLNKSIN----------- 168 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 +L+ P N SD Q L A+ L+++YF Q+R + N Sbjct: 169 ---------QVQLTPMPINASDQAFAQELDALALLMKYYFL---TAQSRKNALEAMQDNA 216 Query: 241 QRSWRYLDIINRMIDRPG-GRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + R+ P R L F +L P++L ED +T+L Sbjct: 217 FLWEKAKALCIRLQKEPHLAEKVREYLSAFFVR------DKKLANIGTPIILFEDLDTQL 270 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP M+++ W L++ L +QRI TTNS ELLS P++ +CRLVR A+++ L E Sbjct: 271 HPRMIAILWALISQLQIQRITTTNSMELLSHIPLKEICRLVRSPDHTHAYQIEGGMLGKE 330 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 + R+++FHI NR +LFA+ W+LVEGETE W++ E+A+ D EGI+++EFAQ GL Sbjct: 331 NLRKLTFHIHHNRGLALFAKTWILVEGETEVWILEEMAKLLNIDLDIEGIRIVEFAQCGL 390 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 +PL+K+A+ MGIEW+VL DGD+AG +YA TV+SL +N LT LP D+EHF Y Sbjct: 391 RPLIKYAKSMGIEWYVLTDGDDAGLRYADTVQSLEDNF----ANRLTILPYRDIEHFFYH 446 Query: 480 QGFSDVFHRMAQI-PENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 GF VF ++A+ P +II +A+H +SKPDLAI ++ E RG D +P L K+ Sbjct: 447 SGFKAVFLKLARWQPNGKFYPTSQIIKRAVHFTSKPDLAIALSKEMELRGEDKIPVLFKQ 506 Query: 539 MFSRVLWLAR 548 +F VL L + Sbjct: 507 LFENVLLLTQ 516 >UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8 Tax=Pasteurellaceae RepID=A6VPB5_ACTSZ Length = 519 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 223/553 (40%), Positives = 324/553 (58%), Gaps = 37/553 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + ++VGFRGINRLS+ L + VLIGENAWGKSSLL AL+L+L+ ++ LY F ++DF Sbjct: 1 MYLRQCDLVGFRGINRLSIHLRPHMVLIGENAWGKSSLLAALSLILNNKNRLYRFTQEDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + ++ TF E + + +A + P DGY RI+ R+EGE + Sbjct: 61 HHEES-----TPAIMLLFTFSERDIKEDMDDKNQSFQAVFVPHDDGYDRIYLRVEGEMRQ 115 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + V+T SFLD+ G PI +E+ + A L+ P+ R RDAR Sbjct: 116 N-DVITTYSFLDELGEPICLENTEEVALSLICRHPIYRFRDAR----------------- 157 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF--SEQGAGQARYRLMRRRAS 238 L+ L+ + A+ +L+HYF S + A+ L+ A Sbjct: 158 -----LNSEQDLLNPQNMRAKYKSEDRQFQAVGLVLQHYFMSSRRNDVLAQKMLLEPTA- 211 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 W L ++ + + + R R L+ TL + +R K RP+LL EDPE R Sbjct: 212 ----LWDELKLLCQRLKQDETRELRTRLVEFLQTLFISDAPVRTSKYHRPVLLFEDPEAR 267 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 LHP M+++ W L+ LP+QRI TTNS EL+S ++ +CRLVR + R +++L L Sbjct: 268 LHPRMIAILWELMQYLPIQRITTTNSVELVSQAELKDICRLVRYTDRTLSYQLFRRELGK 327 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 ED RR++FHI NR +LF+R W+LVEGETE W++ ELA+ + EGI+++EFAQSG Sbjct: 328 EDLRRLTFHIHHNRSLALFSRTWILVEGETEVWILAELAKLLDINLSMEGIRIVEFAQSG 387 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 L+PL+K+A+ MGIEW+VL DGDEAG+KY+ T +LL + E + +T LP LD+EHF Y Sbjct: 388 LRPLIKYAKAMGIEWYVLTDGDEAGRKYSETAHNLLE-EHEMSSQRITTLPKLDIEHFFY 446 Query: 479 RQGFSDVFHRMAQIP-ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 +GF +VF R+A+ + + +RKII +AI R+SKPDLAI ++ E RRG S+P L K Sbjct: 447 TEGFENVFIRLARWERQGRYLPMRKIIQRAIQRTSKPDLAIALSAEMERRGTQSIPLLFK 506 Query: 538 KMFSRVLWLARGR 550 ++FS+VL L R + Sbjct: 507 RLFSKVLNLTRTQ 519 >UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS5_9SYNE Length = 568 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 167/587 (28%), Positives = 259/587 (44%), Gaps = 59/587 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L ++ I FRGI L + L VLIGEN GK+S+L+A+ LS + F Sbjct: 1 MQLTKIAIKNFRGIEELEIDLAPCTVLIGENNTGKTSILEAIYTCLSRNLARKVVPFGDY 60 Query: 59 DFWFPPG-DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF + + TF ES G + + + D I +R+ Sbjct: 61 DFHLTAAMPDPSSSPPIELNFTFVESEEGEWPDAIVQAFDKAYQARADNRLEIRFRVVAA 120 Query: 118 SAEDGSVMTL-RSFLDKDGHPIDVEDINDQARHLVRLMPVLRL---RDARFMRRIRN--- 170 L +F D + + R L +L PV L RDA + R+ Sbjct: 121 YDPASKDFFLDWTFRDLADNELTGAKSPQLVRELQQLNPVFFLAAVRDAGHHFQGRSQFW 180 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFS--------E 222 G+ P ++ R ++ + + A+ Q++ + Sbjct: 181 GSFTKNPQIDDATR------------------AELEEQIEAINQIILDSHTPFDEVKTQV 222 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRM-------------IDRPGGRSYRVILLGL 269 G+ S E R D++N+ I + G + + +L L Sbjct: 223 AKTGRLVPLASTDLVSVEAIPARIFDMLNKTQVKLAARGGAKLPITQHGAGTQSLSVLFL 282 Query: 270 FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLS 329 F L ++ D D+ PLL +E+PE+ LHP + W +L+ + Q+I T+SGEL++ Sbjct: 283 FEAFLNSRLAEAYDPDSEPLLTLEEPESHLHPSAVRSLWQVLSGIRGQKIIATHSGELIA 342 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 P+ + RL R++ +V +++ LS +D R+I++H+R R + LFA+ WLLVEGE+E Sbjct: 343 AVPLHSIRRLARKAGKVEVFQVNEGTLSPDDERKINYHVRAKRGNLLFAKSWLLVEGESE 402 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 W + E AR + EG+ +EFAQ GL PL+K A +GIEWHV DGD AG++YA Sbjct: 403 FWFLPEAARLLDLDLELEGVCCVEFAQCGLAPLIKLATELGIEWHVFADGDPAGQRYATV 462 Query: 450 VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPE--------NVPMNLR 501 R LL E + LT L D+EH M+ G+S V+ P+ P Sbjct: 463 ARGLLGAT--PEAQRLTLLAEKDIEHAMWSHGYSAVYDSAVGAPQRANITAIPGTPDYTE 520 Query: 502 KIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 + I AI +SKP LAIE A + G +P ++ + + AR Sbjct: 521 QTIRMAISSTSKPHLAIEAVEAARQAGSPGLPAAIETAITTAVNNAR 567 >UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q554_9BACT Length = 574 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 148/586 (25%), Positives = 254/586 (43%), Gaps = 49/586 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY---HFER 57 M L ++I FRG+ L L L+ VLIGEN GKS++L+A+ L+L+ + F Sbjct: 1 MKLIEIKIENFRGVRSLHLPLDGLTVLIGENNTGKSTVLEAIRLVLTRGFGVRRGGQFTE 60 Query: 58 DDFWFPPGDINGRE-HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DF + + + I L F E + + T G + I+ + +G Sbjct: 61 YDFHLKDANATPQTADQISITLHFAEEQENEWPDAVIQQMSEVIQLGTTGLNHIWLQAKG 120 Query: 117 E-SAEDGSVMTLRSFLDKDGHPIDVEDIN--DQARHLVRLMPVLRLRDARFMRRIR---- 169 AE GS T +FL+ G + +++ + V L + LRDA R Sbjct: 121 GYQAESGSFETKWAFLNSSGAELVLKNATPLNLISRFVPLFFLSALRDASQEFGQRGQFW 180 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 +G + ++ + +++ + RE+ N S GL+ + + + AG+ Sbjct: 181 SGFLKSIQLPDDQRERIEEMLREV-----NTSVIGANAGLTEVTKKIAD------AGRLV 229 Query: 230 YRLMRRRASNEQRSWRYLDIINRM-------------IDRPGGRSYRVILLGLFATLLQA 276 + E R D++ ++ + R G + + +L LF A Sbjct: 230 PLDLADPVVLEAIPTRVFDMVGKIQVHLKSSYGVKLPLHRHGEGTQSLAVLMLFQAFTSA 289 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHV 336 T ++ P+L +E+PE LHP + L + Q + +++SG+L+S PV + Sbjct: 290 NLTEAYYPESTPILALEEPEAHLHPSAIRSLGSFLEKMTGQILVSSHSGDLVSRVPVMAL 349 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 RL + + R+ + + + I + IR + LF+RCWLLVEGE++ ++ L Sbjct: 350 RRLYKHNGETKIGRMESGAFTGRELQAIDYSIRLAKGHYLFSRCWLLVEGESDYHLMPLL 409 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLK--PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 GH D V+E +Q K P +KFA+ +GI+W ++ DGD G+ Y + L Sbjct: 410 FEVMGHSQDQVSFSVLEISQVIDKGEPFIKFAKALGIQWFMMADGDSEGRGYNKRAKKYL 469 Query: 455 NNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMA----------QIPENVPMNLRKII 504 N + L D+EH + G+SD M Q + + +I Sbjct: 470 ENGESL-ADRARTLTCADIEHEFWHSGYSDFMMNMVLPQTQSLIDTQAANDTAKKTKLLI 528 Query: 505 SKAIHRSS-KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 AI ++ KP A +A E +RG ++P +K + +RV+ LA G Sbjct: 529 KAAIKKAGEKPAFAQALAAEVRQRGAGTIPQTIKDIITRVVQLAGG 574 >UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VB67_ACIBY Length = 597 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 109/456 (23%), Positives = 185/456 (40%), Gaps = 25/456 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L+ ++I FR + + L N VL+GEN GKS+L+ A+ L++ + Sbjct: 1 MHLKNLKIRNFRNFESIDIPLSDNIVLLGENRTGKSNLIFAMRLVIDQNLSDSARQLKLS 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DFW + +H+ T E+ P P T IF R + E Sbjct: 61 DFWDGCDLFTKPQIEVHLDFTDFENDPD--LTALLTDYRLASDPHTVRLSYIF-RCKAEC 117 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRIRNGTVPNVP 177 + FL G ++ + IN+Q R + L + LRDA + RN + P Sbjct: 118 TGLPTSSEDFEFL-IYGGDVEEKPINNQVRRRISLDLLDALRDAENQLGSWRNSPLR--P 174 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ-----GAGQARYRL 232 +E R +D + L++ +L + +++L+ S+Q G G Sbjct: 175 LIENAMRAID--STTLTTISADLEAANKKIVEQPQIKVLDSSLSKQILSLSGKGHDLKPS 232 Query: 233 MRRRASNEQRSWR----YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 +R ++ R +R Y+D R I+ S VIL+ L + + Sbjct: 233 LRFSNADPLRLFRSLGMYIDEGKRSINEASLGSANVILMALKLEEFSWRKEKNERNYS-- 290 Query: 289 LLLIEDPETRLHPIMLSVAWHLL---NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 LL IE+PE LHP + + + I T++S L ++ P+ + L + ++ Sbjct: 291 LLCIEEPEAHLHPQLQRSVFKNIFNEKDSAQALIITSHSPTLAAVVPLRSIVNLRQINNS 350 Query: 346 VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 A+ L + ++ I ++ R LF++ + VEG+ E +I A G+ D Sbjct: 351 TKAFSLANLPIDEDEKDDIERYLIATRSEILFSKGIIFVEGDAEEALIPSFAELLGYDLD 410 Query: 406 AEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 GI V KP VK A +GI + ++ D D Sbjct: 411 GFGITVCNIGGVNFKPYVKLASSLGIPFTIITDWDP 446 >UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escherichia coli E24377A RepID=A7ZRD6_ECO24 Length = 607 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 211/530 (39%), Gaps = 31/530 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 +++++V I GFRGI+ + + L + VL+G+N GK+S++ A+ L + S + +DF Sbjct: 3 ILIDKVRISGFRGISNIEITLPRVTVLLGQNNAGKTSVIKAMQLAMGDYS--RYLSDEDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRY-----RPLEACWTPCTDGYHRIFYRLE 115 G+ R+ + + L F ++ G R++ + + DG + R Sbjct: 61 HI--GEDEKRQEAITVDLRFI-AVDGETRIKEFSENWQQVFGEKIQSEPDGSQFVCIRTT 117 Query: 116 GESAE-DGSVMTLRSFLDKDGHPIDVED--INDQAR-----HLVRLMPVLRLRDARFMRR 167 + G + R LD ++ +D +N++ R V +P+ RD + Sbjct: 118 AKPDRVKGGYVVERFHLDIWPERMNWQDARVNNKNRLGKRLEFVPFIPIDAQRDIHSELK 177 Query: 168 IRNGTVPNV-PNVEVTARQLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYFSEQG- 224 ++ V V +VE + + L R ++ + + + + + L + L F G Sbjct: 178 EKSSFVGRVLSSVEYDDKDVAELERMVAEINKEAIEKSEPLKRLKNHLDNLNQSFEGSGQ 237 Query: 225 ----AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + R + +R S + G RS+ +L T L K Sbjct: 238 TELTPFPKKIRDLSKRFS-VNFGESDKSSFSMEYHGMGTRSWASMLTVKAFTELLVKNHE 296 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLV 340 + P++ E+PE LHP + L P Q I +T+S + L + + L Sbjct: 297 EEAEPFFPIMAAEEPEAHLHPNAQRTLYRQLVDAPGQVIISTHSPYIAGLAELHEIRFLS 356 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ- 399 ++ + V ++L +D R++ + +R LF++ +L EGETE + EL Sbjct: 357 KQENSVCVYQLR-DKFDGDDLRKLRREVVHSRGELLFSKAIVLSEGETEEQALPELFEAY 415 Query: 400 CGHHFDAEGIKVIEFAQSG--LKPLVKFARRMGIEWHVLVDGDEAGKKYAATV-RSLLNN 456 G H + GI + SG +P + A+ I + DG+E K + Sbjct: 416 TGKHPFSLGINFVGVNGSGAKYRPFLILAKDFNIPVFIFSDGEEQTVKDLKKNYEKVFGV 475 Query: 457 DREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISK 506 ++T L D E ++ QGF + + + + I K Sbjct: 476 TDIMNAANITILEGTDFEGYLLSQGFDQLIEKTIHEIDGDDAIDKWIEKK 525 >UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=B0RTN2_XANCB Length = 595 Score = 317 bits (812), Expect = 8e-85, Method: Composition-based stats. Identities = 120/616 (19%), Positives = 214/616 (34%), Gaps = 99/616 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERD 58 M + R+ ++ F + + + ++ V++GEN GKS+ + L L+L P + Sbjct: 1 MRISRIRLINFANFSDIDIETGESIVIVGENKVGKSNFIRGLQLILDPGLSERDRQLRLE 60 Query: 59 DFWFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEG 116 FW G+ G + + LT P R L C P R+ YR + Sbjct: 61 HFWDGLGEDKVGETVEVSVDLTDFTDDP-----RLMAHLNDCVIDPGPPMVARLTYRFQP 115 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQ--ARHLVRLMPV---LRLRDAR-FMRRIRN 170 ++ + +L+ + + I D D L R++P+ + LRDA + RN Sbjct: 116 KTGLGHAPESLKDY----EYVIFGGDDPDMRIGGALRRMLPIDVQVALRDAEKDLASWRN 171 Query: 171 GTVPNVPNV----------EVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHY 219 + + E Q+D REL+ H + ++ + I + L A+ Sbjct: 172 SPLRPLIEDLAASLNDDTREEIQNQVDQAQRELAGHEEVVATAERISERLIAIA------ 225 Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 EQ A L R RS R ++ G R LG + A + Sbjct: 226 -GEQHAVPMSLGLAPTRVDALLRSLR-------LLIDNGVRGVGDASLGTANLIFLALKS 277 Query: 280 LRLDKDA------RPLLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTNS 324 L LD+ ++E+PE LHP + + + PL I TT+S Sbjct: 278 LELDRLVSDGERDHTFFVVEEPEAHLHPHVQRLIYRYFLGTGAEDGDEQPPLTTILTTHS 337 Query: 325 GELLSLTPVEHVCRLVRE--SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 + S+ P+ + L + + A + + D + +I R F+R + Sbjct: 338 PHIASVAPIRSIVLLRHDAAEGKTVAVSTANAPFTQRDEEDLQRYIDVTRGEIFFSRGVI 397 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGD 440 LVEG+ E +++ A D GI V + P VK + I +L D D Sbjct: 398 LVEGDAERFIVPAFAEVLNIPLDMLGITVCSVGGTNFTPYVKLLGPEGLNIPHVILTDRD 457 Query: 441 EAGKKYAATVRSLLN---------NDREAEREHLTALP--------ALDMEHFMYRQGFS 483 + R L+N + E + + + L +E ++ G + Sbjct: 458 PTNGNHPLVRRRLINVLDVIEGGVDHEELDADEVIKLAEQYGYFVNENTLEPELFAGGLA 517 Query: 484 DVFHR----------------MAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRR 527 + + Q ++ ++ + I R K A +A Sbjct: 518 EDMQEVIREELPRLRRETLNALQQWVDDPAQIDEDLLLRLIERIGKGRFAQALAPSVSE- 576 Query: 528 GVDSVPTLLKKMFSRV 543 D P ++ + Sbjct: 577 --DVCPAYIRSALEHI 590 >UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0KM73_PECWW Length = 596 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 107/511 (20%), Positives = 188/511 (36%), Gaps = 51/511 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERD 58 M + RV ++ F + + + ++ V++GEN GKS+ + L L+L P + Sbjct: 1 MRISRVRLINFANFSNVDVETGESIVIVGENKVGKSNFIRGLQLILDPGLSERDRQLGFE 60 Query: 59 DFWFPPGDIN-GREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEG 116 FW G+ G + + LT P R L C P R+ YR + Sbjct: 61 HFWDGLGEEKLGETIEISVDLTDFTDDP-----RLMAHLNDCVVNPGPPMVARLTYRFQP 115 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQ--ARHLVRLMPVL---RLRDAR-FMRRIRN 170 ++ + + +L+ + + I D L R++P+ LRDA + RN Sbjct: 116 KTELNRAPESLKDY----EYVIFGGTDPDMHIGGALRRMLPIDVQGALRDAEKDLSSWRN 171 Query: 171 GTVPNVPNV----------EVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHY 219 + + E Q+D REL+ H ++ + I + L A+ Sbjct: 172 SPLRPLIEELTASLDDDAREEIQTQIDEAQRELAGHDDVVATAERISERLVAIAG----- 226 Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 + + R + + LD R I + +I L L + L+ Sbjct: 227 -DQHAVPVSLGLAPARVDALLRSLRLLLDNGIRGIGDASLGTANLIFLALKS--LELDRL 283 Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTNSGELLSL 330 + + ++E+PE LHP + + + PL I TT+S + S+ Sbjct: 284 VDDGERDHTFFVVEEPEAHLHPHVQRLVYRYFLGTDGDNRDESTPLTTILTTHSPHIASV 343 Query: 331 TPVEHVCRLVR--ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 TP+ + L E A + + D + +I R F+R +LVEG+ Sbjct: 344 TPIRSIVLLRHDPEEEETIAVSTVNAPFTQRDEDDLQRYIDVTRGEIFFSRGVVLVEGDA 403 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDEAGKKY 446 E +++ A G D GI V + P VK + + I +L D D ++ Sbjct: 404 ERFLVPAFADALGIPLDMLGITVCSVGGTNFTPYVKLLGPQGLDIPHVILTDRDPVNGRH 463 Query: 447 AATVRSLLNNDREAEREHLTALPALDMEHFM 477 R ++ E EH +D E + Sbjct: 464 PLVRRRFISLLELVEYEHYRDYENMDAEDVI 494 >UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GF29_GEOUR Length = 640 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 99/522 (18%), Positives = 190/522 (36%), Gaps = 32/522 (6%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWF 62 + V I FR + + + L+ VLIG N GK+S LDA+ + L +DD Sbjct: 34 VTDVRIANFRSLMDIEVSLDSLTVLIGANNAGKTSFLDAIYAAIGAGRKL--LGQDDIRV 91 Query: 63 PPGD-INGREHHLHIILTFRESLPGRHRVRRYRPLEACWT---------PCTDGYHRI-- 110 P + I ++ ++ I + R + + P + WT TD H Sbjct: 92 APEEAIPPKDRNVVIDIKIR-PITDDGKFADEFPEGSFWTSLWGSGITPAETDDSHEFMA 150 Query: 111 FYRLEGESAEDGSVMTLRSFLDKD-------GHPIDVEDINDQARHLVRLMPVLRLRD-A 162 F + S G + R FL + P+ + + + L + RD Sbjct: 151 FRTILSWSFAKGDYVLERKFLKEWRPYAEWLPTPMQEKRLQSSDIEPIALHYIDAKRDLD 210 Query: 163 RFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEHYFS 221 +R+ + ++ ++ + FL L+ Q++ D +I + L + ++ + Sbjct: 211 DDLRKQGSFWRKLTDDLGLSPADIIFLEEALTGINQHIVDKSEILKHLKHNLADMQSVVA 270 Query: 222 EQGAG---QARYRLMRRRASNEQRSWRYLDIINRMIDRPG--GRSYRVILLGLFATLLQA 276 +GAG R +R + S+ + + R G RS +L+ ++ Sbjct: 271 AEGAGIDISPVARRLRDLSKGIDVSFSTTAAQSFPLTRHGMGTRSLASLLVFRAFASWRS 330 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHV 336 L +E+PE+ LHP + + +P QRI +T+S + + Sbjct: 331 SQAQMEGDQIHTFLALEEPESHLHPQAQRSLFSHIKTIPGQRIVSTHSPYFAGQAQLSDL 390 Query: 337 CRLVRESSRVAAWRLGPSGL-STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 ++ +L S L + ED R++ + R LF+R + EG+TE + Sbjct: 391 RLFLKRGGNTIVTQLDISQLGTKEDLRKLQQTVVDTRGDLLFSRAVIFFEGQTEEQALPI 450 Query: 396 LARQCGH-HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 A + + G + + P + A+ + I W+VL DG+ + Sbjct: 451 WAEKYWNASIHELGFSFVRVNGTDYFPFISLAQHLEIPWYVLADGEPRPLGELNKALKKI 510 Query: 455 NNDREAEREHLTALP-ALDMEHFMYRQGFSDVFHRMAQIPEN 495 + ++ P + E +G+ + N Sbjct: 511 GQVVASACPNIVVFPNGNNFESQFLAEGYLPEIEKALNETHN 552 >UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKF9_DESAA Length = 671 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 107/548 (19%), Positives = 194/548 (35%), Gaps = 67/548 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-----NNVLIGENAWGKSSLLDALTLLL-SPESDLYH 54 M L ++ I FR E L+GEN GKS+++DA+ +L + + + Sbjct: 1 MYLSKITIENFRCFGERDKKFEMSLKPGLTTLVGENDAGKSAIIDAIRYVLCTTDQEWLR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + +DF + I+ F + L H+ R T G + L Sbjct: 61 IKENDFHVG-----ANPKEIRIVCKF-DDLEAHHQ----RAFIEYLTHDASGAKPPVFFL 110 Query: 115 EGESAEDGSVMTLRSFLDKD---GHPIDVEDINDQARHLVRLMPVLRLRDAR-------- 163 + E G +M R + + G + I+ + R L+ + + LRDA Sbjct: 111 HWTAKETGEIMKGRPYRRIELHSGEKGEGPSIDPKVRELLSVTYLRPLRDAERALSAGRG 170 Query: 164 --------FMRRIRNGTVP---NVPNVEVTARQLDFLARELSSHPQNLSDG--QIRQGLS 210 +++ P V N E++ + LA L + + + QI L Sbjct: 171 SRLSQVLYHTEEVKSSGKPYGEGVANEELSVTGIGELADALIKNQPGIVETRKQIDNHLE 230 Query: 211 AMVQLLEHYFSE-QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGL 269 + L S+ + +G A +R R E+ LD+ I +PG S ++ + Sbjct: 231 KLTLLGNPICSKVEVSGAAASPDVRLRQLLEK-----LDLSLDEIGKPGLGSNNLLFMAC 285 Query: 270 FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIML----SVAWHLLNLLPLQRIATTNSG 325 LL + + +LLIE+PE LHP +Q I TT+S Sbjct: 286 ELLLLAQ------ENEGNRMLLIEEPEAHLHPQRQLQVMKTLQEEAEEKKIQIIVTTHSP 339 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 L S ++ + + ++ + G + L D + + + + + FAR ++VE Sbjct: 340 NLASAIKLKGLTLI--HENKAFSMAEGETKLEKSDYQFLERFLDVTKANLFFARGVMIVE 397 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR--------MGIEWHVLV 437 G+ E +I LA+ G F G+ ++ GL+ + +R + I + Sbjct: 398 GDAENILIPTLAKLIGRDFTENGVSIVNVGGVGLRRYARIFQRVHIEKDGLLKIPVACVT 457 Query: 438 DGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM-EHFMYRQGFSDVFHRMAQIPENV 496 D D A + L E + D E Q + + Sbjct: 458 DLDVMPNCAPAIIDKLDKEGHVPEIKKRQWRMKHDYNEEKPLEQKYFSTEQKATGQCVRT 517 Query: 497 PMNLRKII 504 ++ + Sbjct: 518 FVSDEWTM 525 >UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD family n=3 Tax=Proteobacteria RepID=Q13ZS1_BURXL Length = 613 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 109/488 (22%), Positives = 179/488 (36%), Gaps = 69/488 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L R+ I FR + L ++ V++GEN GK++LL AL L+L P D Sbjct: 1 MRLSRIVIKNFRNFKHFDVRLGEHAVVLGENKVGKTNLLFALRLILDPALPDSSRRLRID 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVR------------------RYRPLEACW 100 DFW E + + + FR+ + + RY+P++ Sbjct: 61 DFWDGLARPLKAEDVIEVSVEFRDFENNENLLAVLADHLVRPDPMVARVTYRYQPVQGLE 120 Query: 101 TPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR 160 F G E+ LR ++ D L P LR Sbjct: 121 GAPRSEADYEFILFGGGRIENAIGYELRRWMPMD------------------LFPALRDA 162 Query: 161 DARFMRRIRNGTVPNVPNV--EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 ++ R R+ P + V A+ L +A E+ + ++ LS +V + Sbjct: 163 ESDLARWSRSPLRPLLDRAAKTVDAKALSAIAGEVHATTSKIAA---LPELSDVVSQVND 219 Query: 219 YFSE-QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + G A + + +R R L +M+ G R LG L A Sbjct: 220 QLTVMVGDKHAVKTALGFAPTEPERLLRAL----QMMIDSGKRGVAEASLGSANVLYLAL 275 Query: 278 GTLRL------DKDARPLLLIEDPETRLHPIMLSVAWH---------LLNLLPLQRIATT 322 L + L IE+PE LHP + + + + P + TT Sbjct: 276 KHLEHQYLVDEGERQHTFLAIEEPEAHLHPHLQRLIYRNYLQTRDEVQADTEPRSILLTT 335 Query: 323 NSGELLSLTPVEHVCRL--VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARC 380 +S + S+ P+ +V L V ++ L L+T D + +I R F++ Sbjct: 336 HSPNVASVAPLANVVVLRHVVDAGHTVGRSLKGVKLNTSDREDLERYIDVTRGELFFSKG 395 Query: 381 WLLVEGETETWVINELARQCGH--HFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVL 436 +LVEG+ E +++ LA+ FDA GI V A + P V+ + + I + VL Sbjct: 396 VILVEGDAEKFLLPTLAKLNDKALDFDAMGISVCSIAGTNFAPYVQLLGQKGLDIPFVVL 455 Query: 437 VDGDEAGK 444 D D + Sbjct: 456 TDFDPKNQ 463 >UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepID=Q1LBX9_RALME Length = 598 Score = 299 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 108/474 (22%), Positives = 183/474 (38%), Gaps = 32/474 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L+R+ I FR ++ + L+ + V++GEN GKS+LL AL L+L P + Sbjct: 1 MKLKRIYISNFRNFEQIDVALDGSVVVVGENRVGKSNLLFALRLILDPSLPDSARQLGQG 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE--- 115 DFW G+ E I F E + + + L R+ Y Sbjct: 61 DFWDGLGEPLEDER----ITVFVELIEFANDMDLLAVLTDYRLDDDPDTVRLTYEFRPIA 116 Query: 116 --GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV 173 + F + + D+ + + L+P LR + R+ Sbjct: 117 GLAGFPQADEDYEFICFGGESENKRFGHDVRRRVA--MDLLPALRDAEGDLAVWRRSPLR 174 Query: 174 PNVPNV--EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 P + EV ++ L + + Q L++ Q L +L + + S G Q Sbjct: 175 PLLERAFAEVPSQDLGQVRDVVQQATQQLAEFPTVQALQ--QRLRDLFVSMSGPKQDIQP 232 Query: 232 LMRRRASNEQRSWRYLDIIN----RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + ++ R R L ++ R I S V L L A LQ + ++ Sbjct: 233 ALGFGTTDVTRLIRNLKLLIDGGLRTIGDASLGSANVAFLTLKALELQQ--LMSENRRDH 290 Query: 288 PLLLIEDPETRLHPIMLSVAWH-LLNLLPL------QRIATTNSGELLSLTPVEHVCRLV 340 +L IE+PE LHP + + L L + TT+S + S+ P+ + L Sbjct: 291 TVLAIEEPEAHLHPHLQRSVYRHLFEDLAGAQGEQLSLMLTTHSPHIASVAPLRSLVLLR 350 Query: 341 RES-SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 + L+ ++ ++ ++ R LFAR +LVEG+ E +++ +A Sbjct: 351 ESPQNGTVGTSSAEISLTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVMAAS 410 Query: 400 CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE-AGKKYAATVRS 452 GH D GI + + + P KF +GI + ++ D D GKK RS Sbjct: 411 MGHDLDHLGITICSVSGTNFTPYAKFLTALGIPFSIITDWDPRVGKKPLGFNRS 464 >UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms RepID=B0KSV7_PSEPG Length = 574 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 107/465 (23%), Positives = 184/465 (39%), Gaps = 56/465 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS---PESDLYHFER 57 M++ RV + GFR ++ LE+N ++IG N GK++L+ AL LLL ++++ E Sbjct: 1 MLITRVVLKGFRNFADATVGLERNTLIIGANNVGKTNLVYALRLLLDKSLSDAEIEPME- 59 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF HL I + F E + L+G Sbjct: 60 SDFHI--SSAGKISDHLSITIYFSEVSE----------------------DAVLASLKGN 95 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR--DARFMRRIRNGTVPN 175 +D S L+ D+ ++ I LV + L+ + R+++ R+ + Sbjct: 96 ITDD-SCFVLQYTADRRSLTYQIK-IGATKPSLVEIPSRYYLKHINLRYVKSRRD--LEK 151 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSD----GQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 N E RQL L+ E S ++ SD +I + L A+ + + +GA + Sbjct: 152 YINSE--KRQLLKLSLENRSDDESKSDHRQMARIGKALEAINGRIRNLHYVKGATDSVNE 209 Query: 232 LMRRRASNEQRSWRYLDI----INRMIDRPGGR---SYRVILLG-------LFATLLQAK 277 +++ A + LD + + ID S ++LG + L +AK Sbjct: 210 ELQKLAHDFSEYEVKLDSGAIQVQQFIDSLRLGASTSGASVMLGGDGRNNQILMALWKAK 269 Query: 278 GTLRLDKDARPLL-LIEDPETRLHPIMLSVAW-HLLNLLPLQRIATTNSGELLSLTPVEH 335 D D+ + +E+PE LHP +L+N LP Q T++S ++ + Sbjct: 270 SQREHDPDSEVVFYCVEEPEAHLHPHQQRKLADYLINDLPGQTFITSHSPQITARYTPSS 329 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + L R A G S ++ + + + + FA+C LLVEG +E +E Sbjct: 330 IVHLKVTGGRTKAASNGCSNCISKAWDHLGYRMSILPAEAFFAKCVLLVEGPSEILFYSE 389 Query: 396 LARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 LA++ D I ++ VK M I W + D D Sbjct: 390 LAKKLSIDLDFYNISILSVDGIQFSVYVKILDAMEIPWVMRTDND 434 >UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T041_ACIDE Length = 599 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 105/474 (22%), Positives = 175/474 (36%), Gaps = 32/474 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L R+ I FR L + L+ + V++GEN GKS+LL AL L+ P + Sbjct: 1 MKLTRIYINNFRNFLELDVALDGSAVIVGENRVGKSNLLYALRLIFDPSLPDSARQLGQG 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF G+ E I F E + L R+ Y Sbjct: 61 DFCDGLGEPLEGEK----ITVFVELTDFEDDLDLLALLTDFRLDDAANTVRLTYEFRPIP 116 Query: 119 AEDG-----SVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV 173 DG F + D+ + + L+P LR + R+ Sbjct: 117 GLDGFPQADEDYEFICFGGEAETKKFGHDVRRRIA--MDLLPALRDAEGDLAAWRRSPLR 174 Query: 174 PNVPNVE--VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 P + V+ +L + + + + L++ Q L ++ L + S G Q Sbjct: 175 PLLERAFAGVSGEELRGVRDAVHAATEQLAEFPAVQTLEKDLRAL--FTSMSGPKQDIEP 232 Query: 232 LMRRRASNEQRSWRYLDIIN----RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + ++ R +R L ++ R I S V L L A L+ + + ++ Sbjct: 233 SLGFGTTDVTRLFRNLKLLIDGGLRTIGEASLGSANVAFLTLKA--LELRQLMSENRRDH 290 Query: 288 PLLLIEDPETRLHPIMLSVAWH-LLNLL-------PLQRIATTNSGELLSLTPVEHVCRL 339 LL IE+PE LHP + + L L L + TT+S + S+ P+ + L Sbjct: 291 TLLAIEEPEAHLHPHLQRSVYRHLFEDLAAAPAGEQLSLLLTTHSPHIASVAPLRSLVLL 350 Query: 340 VRESSR-VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L+ ++ ++ ++ R LFAR +LVEG+ E +++ A Sbjct: 351 RESKDESTVGTSAATIELTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVFAA 410 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 GH D GI V + + P KF +GI + ++ D D + A Sbjct: 411 SLGHDLDHLGITVCSVSGTNFTPYAKFLTALGIPFSIVTDWDPRIDRQALGFNR 464 >UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q7WXG6_RALEH Length = 656 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 112/491 (22%), Positives = 172/491 (35%), Gaps = 64/491 (13%) Query: 1 MILERVEIVGFRGI--NRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E V I GFR N ++ Q ++G NA GK+++L AL L Sbjct: 1 MHIESVTIAGFRCFGPNPTAIPFSQGLTAIVGPNASGKTAVLQALMRLFGVTRAQRTIVP 60 Query: 58 DDFWFPPGD---INGREHHLHIILTFRESLPGRHRVRRYRP-LEACWTPCTDGYHRIFYR 113 DF P + + R + + L+ E + G P G R Sbjct: 61 SDFHVTPTETERLKSRTLTIDVRLSLPELVDGSATAATVAPVFRHVRIERPGGTPLCRLR 120 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDI---NDQA-------RHLVRLMPVLRLRDA- 162 L +DG T + +D + I+ D +DQA R L++L RDA Sbjct: 121 LRARWDDDG---TAEGAVSQDLNWINTADDVVRDDQASPVAPGDRGLIQLFYTPASRDAG 177 Query: 163 ------------RFMR--RIRNGTVPNVP-------NVEVTARQLDFLARELSSHPQNLS 201 R +R GT V N + + ++ LS + L Sbjct: 178 TQIRATTGALAARLLRAIEWSAGTQATVHAATEQLLNAFGSENAIQAISESLSKRWEKLH 237 Query: 202 DGQI--RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA----SNEQRSWRYLDIINRMID 255 DG I LS M + E + G R R S+ Q+S Y + + D Sbjct: 238 DGDIDCNPELSLMSRRFEEVVARIGVMFKRGPAGEDRGLDALSDGQQSLFYFALAAAVFD 297 Query: 256 RPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL- 314 + A +Q T L+ A L +E+PE L P LS + L Sbjct: 298 ---------VERAAVAGRIQGFRTEELNVPALTLFAVEEPENHLAPYYLSRILQQIRTLV 348 Query: 315 ---PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRIS--FHIR 369 Q I +++S +L P + R R + + P + T D I + Sbjct: 349 ETGAGQAIVSSHSPSVLGRVPPDD-VRYCRRNQATGVSTVLPIPMPTSDVEAIKFVRNAF 407 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRM 429 P FAR LLVEG++E V+ LA D + ++ + + + Sbjct: 408 LAFPELYFARFVLLVEGDSERIVLPRLAEALNLLVDPSFVAIVPLGGRHVNHFWRLLHGL 467 Query: 430 GIEWHVLVDGD 440 GI + L+D D Sbjct: 468 GIPYATLLDLD 478 >UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea RepID=Q12XW2_METBU Length = 594 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 100/551 (18%), Positives = 199/551 (36%), Gaps = 83/551 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH---FER 57 ++++ V I GFRG+ + + LEQ +L G N GK+S L AL L L + F + Sbjct: 3 ILIKTVRIAGFRGLENIEVELEQTTILTGMNNTGKTSFLKALQLALGNRQFVSQDDFFIK 62 Query: 58 DDF-----------------------------------WFPPGDINGREHHLHIILTFRE 82 DF D L ++TF E Sbjct: 63 GDFVSKEIIVDLLIVPINGDGDERDDFSPDWETLFTIERVRNDDAGRSFVPLRTVITFDE 122 Query: 83 ---SLPGRHRVRRYRP--LEACWTPCTDGYHRIFYRLE--GESAEDGSVMTLRSFLDKDG 135 + + + ++ P ++ P ++ +Y ++ G+S++ F D Sbjct: 123 VNNNYKTQQFILKFWPELIKKFDVPGSEQKDINWYEVKDIGDSSKSNFHFDEIPFFYMDA 182 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARF------MRRIRNGTVPNVPNVEVTARQLDFL 189 +EDI + +L +++ ++ D ++ + V + P + + L L Sbjct: 183 QRDILEDIKLRFSNLGKMLSKIKYSDDDINEIESQIKTLNEKAVSSSPILSILKTNLKEL 242 Query: 190 ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 + SH + + + + + + L Y+++Q Sbjct: 243 DTAMDSHGEGIEITPFTKKIRDLNKGLTIYYNDQNESFPMENHGM--------------- 287 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 G RS+ +L L + + P+L IE+PE LHP + Sbjct: 288 --------GTRSWSSLLALKAFVFLLSNNAMEKGTKFFPILTIEEPEAHLHPNAQKKLYE 339 Query: 310 LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIR 369 ++ + Q+I +T+S + S + + + +V ++ L ED R+I+ + Sbjct: 340 QIDSIVGQKIISTHSPSITSAARLSQIRNFYKNE-KVTCGKIETDKLEPEDIRQINRQVT 398 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKV-IEFAQSG----LKPLVK 424 R F++ + VEGETE + A + +F +++ ++F G P ++ Sbjct: 399 NTRGEIFFSKVLVFVEGETEEQALPIFAEK---YFKKSPVEIGLDFIGVGGHPKYLPFLR 455 Query: 425 FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSD 484 FA + I W +L D + + K+ + S ++ + + D E + FS Sbjct: 456 FAEALNIPWLILSDAELSTKESVLSQFSKCSSKKSDINCVVFLDDGNDFEKQLIADNFSV 515 Query: 485 VFHRMAQIPEN 495 N Sbjct: 516 EIKSAISSSCN 526 >UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BEA6_EDWI9 Length = 296 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 139/268 (51%), Positives = 175/268 (65%), Gaps = 4/268 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+VGFRGINR+SL L+ N VLIGENAWGKSSLLDALTL LSPE DLY F+ DF Sbjct: 1 MYLERIEVVGFRGINRISLSLDDNTVLIGENAWGKSSLLDALTLCLSPERDLYRFQPHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 +FPPGD REHHL I+ TF E G R RRY L W D RI++R EGE ++ Sbjct: 61 YFPPGDETAREHHLQIVFTFCEIERGHARARRYYRLSPLWQESGDRLQRIYFRQEGELSD 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP--NVPN 178 D +V T RSFL++ G + + ++ AR L+RL PVLRLRDARF+RR+ + ++P+ Sbjct: 121 DNTVCTWRSFLNEQGESLSLHHVDLLARELIRLHPVLRLRDARFIRRLHPSVLAARHLPD 180 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR--YRLMRRR 236 A+QLD L REL +PQ LS+G++R GL AM QLLEHYFS G A R R Sbjct: 181 QAQVAQQLDDLTRELVCNPQKLSNGELRAGLGAMQQLLEHYFSTNGDETAVGARRRHRNE 240 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRV 264 + +++WR L+ IN+MI G Y Sbjct: 241 IIHGRQAWRSLENINQMIAASGSPQYAS 268 >UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q1T7_RHIE6 Length = 648 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 120/497 (24%), Positives = 192/497 (38%), Gaps = 55/497 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M L V I FR + L L N+++GEN GK++L+DAL LS S + +D Sbjct: 1 MYLSEVSIKDFRVLTDFRLRLNPGINLIVGENNSGKTALVDALRYALSVNSGEWTRVQDR 60 Query: 59 DFWFP---------PGDINGREHHLHIILTFRESLPGRHRVRR--YRPLEACWTPC-TDG 106 DF DI R+ + E++PG + R Y +A T G Sbjct: 61 DFRRGARSFSIQLKFEDITARQAAAFVEHLTHETIPGTNNRRSVLYLNYQAEQTTHLVRG 120 Query: 107 YHRIFYRL-EGESAEDGSVMTL-RSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDAR 163 +I L G +AE SV R FL P+ D RL +L + Sbjct: 121 ARQIRTELRSGANAEGPSVEREARDFLATTYLRPLRDADAELMGGRGSRLAQILGSSE-- 178 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIR-----QGLSAMVQLLEH 218 R V N+ VTA +S+ + + + R + LS ++ ++ Sbjct: 179 --RFGEADVVENLLTTIVTANAAIVENDGVSATRERIEEQLRRLDFRTKPLSPLISIMGG 236 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 EQ R ++ R L+ + +ID R LG L A Sbjct: 237 TDLEQLDASERKQMFRA----------ILERLQLLIDS----QERYQGLGYSNLLFMATE 282 Query: 279 TLRLDKDAR--PLLLIEDPETRLHPIMLSVAWHLLNL------LPLQRIATTNSGELLSL 330 L L+++ PLLLIE+PE LHP + L LQ I TT+S L S Sbjct: 283 LLLLEQEQHDFPLLLIEEPEAHLHPQLQMKFLRALREGFGGQNSSLQSILTTHSPNLASK 342 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 P+E+V + + + R + L ++ + + + + FA+ ++VEG+ E Sbjct: 343 APLENVILMA--EGKAFSLRKDETRLDAQNYVHLEKFLDVTKSNLFFAKSVMIVEGDGEN 400 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV 450 +++ A G F+ G+ V+ P + +R G++ D ++GK V Sbjct: 401 ILLSTFADLLGTPFEDFGVSVVNVGSIAFAPFARIFQRAGMD-----DPADSGKWLRTRV 455 Query: 451 RSLLNNDREAEREHLTA 467 L + D E + Sbjct: 456 VCLRDLDLWPEPARIAD 472 >UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CCC7_9BACE Length = 588 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 115/585 (19%), Positives = 226/585 (38%), Gaps = 50/585 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++++++ I GFRG++ + L VL G N GK+++L AL L L S DD Sbjct: 4 ILIDKIRISGFRGLDDFEMSLTPITVLTGTNNTGKTTILKALQLSLGSRS---FLSIDDL 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF------YRL 114 + + I + F + ++ E +D I +R Sbjct: 61 YISKE---KNATEIIIDIRFV-PINDEGKILNDFSEEWEEVFTSDNIRFIEDFSCVPFRT 116 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVR-------LMPVLRLRDARFMRR 167 S + + D +P + E + R + RD + Sbjct: 117 IISYNSLKSSFDIEQKILVDWYPSEGEKWQNIIAKNSRIDFSKTPFFYIEAQRDVVDDMK 176 Query: 168 IRNGTVPNVPNV---EVTARQLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 ++ + + + + L+ L + +S+ + Q + I + ++ + + Sbjct: 177 LKTSYLGKMLSDVAKAYNKKDLEELEKLISTLNQQAVEKSDILSTIQDSLEGINSAMDKS 236 Query: 224 GAGQARYRLMRR-RASNEQRSWRYLDIINRM-IDRPGGRSYRVILLGLFATLLQAKGTLR 281 G G ++ R N+ S Y D N +D G + L F ++ L Sbjct: 237 GTGVTISPFTKKIRDLNKGVSIHYGDSDNSFTMDYHGMGTRSWSSLLTFKAFIKHNAELA 296 Query: 282 LDKDA--RPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRL 339 ++ P++ IE+PE+ LHP + + +P Q+I +T+S + +E++ L Sbjct: 297 QKENEPFFPIIAIEEPESHLHPNAQKKLYRQMYEMPGQKIISTHSPYVACSANIENLRGL 356 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 + + V+ L + + +D R++ + R LF++ +L EGETE + +A + Sbjct: 357 YKNLNNVSCGILNLNEMDDDDKRKLRQKVINTRGEILFSKAIVLFEGETEEQALPIMAEK 416 Query: 400 -CGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDG-DEAGKKYAATVRSL--- 453 G GI I +G P ++FA+ I W++ DG D+ K A V+ + Sbjct: 417 YFGCPASELGINFIGVGGAGSYFPFLQFAQSFNIPWYIFSDGEDDPVSKMTAAVKKIRKE 476 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGF-SDVFHRMAQIPENVPMNLRKIISKAI---- 508 L E E+ D E ++ R + +D+ + QI + +N + SKA Sbjct: 477 LFTTIENEKNIFIIDHKEDFEKYIIRLDYLNDIKSYLKQIELSKCVNEQHKESKAKGIDF 536 Query: 509 ----------HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 + +K A+ + A + +P L+ +F ++ Sbjct: 537 FCTNSYVLSESKKNKTKWAL-IYAHAIYNSLKPIPLLVSNLFDKI 580 >UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM55_ANOFW Length = 669 Score = 265 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 86/496 (17%), Positives = 173/496 (34%), Gaps = 61/496 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERDD 59 + RV+I FR + + L V+IGEN GK++ L A+ L+L P + + D Sbjct: 13 YISRVKIKNFRNFRDIDISLSHKQVIIGENNVGKTNFLRAIQLILDPTLSDEDRYLTESD 72 Query: 60 FWFPPG------------------DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT 101 F+ + N + T + P RY P+E Sbjct: 73 FFDGLENPMENGEDIEIIIEIRGYEHNKNILSVLSDATISDDPPTLRLTYRYYPIEK--- 129 Query: 102 PCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDG-HPIDVEDINDQARHLVRLMPVLR-- 158 + +G + ++ + R +L+ + I + + + +L+ Sbjct: 130 -EDGTKDYEYIIFQGINPDNLFKHSHRKYLNMRVINAIRDVESELRNSRRSPINQLLKQY 188 Query: 159 ------LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSS-HPQNLSDGQ------- 204 L++ + R+ V + ++ ++++ +++ P +L + Sbjct: 189 EIDKTELKEIAEKLKQRSDEVLTLDEIKDLTQKINERFKKVIGVQPDSLVSLETIDIDPN 248 Query: 205 -IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYR 263 I L M+ + SE G + + + + +S Sbjct: 249 RILNTLKLMMGDKKRPTSETSLGLNNLLYIALILLLLEDRTIPTFLKKEKFEELLQKSGS 308 Query: 264 VILLGLF------ATLLQAKGTLRLDK-------------DARPLLLIEDPETRLHPIML 304 IL + L+ + K + +L IE+PE LHP + Sbjct: 309 NILTSSYEKNDNDNYFLKGDLSKNELKQLYSFMDMHNPINEGFTILAIEEPEAHLHPTLQ 368 Query: 305 SVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRI 364 + + + + + TT+S + S+ P+ + + ++ L+ + R + Sbjct: 369 RIIYRDVMVGNSSVLMTTHSPHITSVAPINSIVHMRWTNNGTQVHTTSNLSLTPTEKRDL 428 Query: 365 SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK 424 ++ R F + +LVEG E ++I A D +GI V + P VK Sbjct: 429 ERYLDVKRGEIYFGKGVILVEGIAEEYLIPRFAELLDKPLDQKGIVVCNINSTNFAPYVK 488 Query: 425 FARRMGIEWHVLVDGD 440 F +GI + V+ DGD Sbjct: 489 FLDALGIPYVVITDGD 504 >UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R657_KANKD Length = 661 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 101/515 (19%), Positives = 194/515 (37%), Gaps = 64/515 (12%) Query: 1 MILERVEIVGFRGINRLS---LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E++ I FR + M +G N GKS+L+ AL + + R Sbjct: 1 MEIEKISISNFRCFSEAEAVIFMESDITCFVGNNGTGKSALILALKRIFGSTREERTVIR 60 Query: 58 DDFWFPPGD----INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 +DF+ G+ I+GRE ++ II +F E R P + R+ R Sbjct: 61 EDFYVGSGEDYKEISGRELYIEIIFSFPELQTAVDESREVCPAFSSVIYADQDDKRLKAR 120 Query: 114 LEGESAED-----GSVMTLRSFLDKDGHPIDVEDINDQA------RHLVRLMPVLRLRDA 162 + ES D V + ++ +D ++ R ++L + RD+ Sbjct: 121 MRLESKWDENEYEDEVQSQLYWITTSNKVDFGDDAENKFPVSVYDRKHIKLRYIPAFRDS 180 Query: 163 RFMRRIRNGTVPNVPNV-----EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL-- 215 + + ++ N+ + + +++ ++R+LS+ Q+L I+ S + Q+ Sbjct: 181 KSTLKNEVKSLTNLLDGYTDLNISSQEKIEAISRDLSNEIQSLES--IKTATSLLKQVWN 238 Query: 216 ------LEHY------FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYR 263 L+HY + G+ + + + +E R ++ ++ G S Sbjct: 239 NTHDKTLKHYQEPKLEAASTEIGELLRTMTVKLSPSEDGGSRDINELSD-----GQISLL 293 Query: 264 VILLGLFATLLQAK---------GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL--- 311 L + +L+ K +L D + E+PE L P L +L Sbjct: 294 YFTLSVVLYILEQKHHSGELRGFKSLDRDIPVFTIFAFEEPENHLSPFYLGRVIEVLSTQ 353 Query: 312 -NLLPLQRIATTNSGELLSLTP-VEHVCRLVRESSRVAAWR-----LGPSGLSTEDSRRI 364 N L I T++S ++ VE + +E + + L PS + +D + I Sbjct: 354 TNSLKATGIITSHSTSVVRRMQRVEQIRHFRQEVNSTDRYSIVNQVLLPSEKAEDDYKYI 413 Query: 365 SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK 424 + I P FA+ +L EG++E VI +LA G D + ++ + + + Sbjct: 414 NQAI-LAHPELYFAKLVILGEGDSEEIVIPKLAEALGFDLDPSFVSFVKLGGRHVNHMWR 472 Query: 425 FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 + I + LVD D + ++ E Sbjct: 473 LLSDLNIPFLTLVDMDLGRSGAGPLRIKYIIDELE 507 >UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clostridium kluyveri RepID=A5N298_CLOK5 Length = 539 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 99/575 (17%), Positives = 190/575 (33%), Gaps = 71/575 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQN--NVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M LE + I +R I R++L L N VL G N GKS++L A+ +L Y + Sbjct: 1 MRLEAIVIKHYRSIERVALKLPPNKPLVLFGPNNAGKSNILSAINRILGERYPTYIEMLE 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 +F H+ T +PL + +GY I Sbjct: 61 SDYFKRNQNEYPTAHITAKFT--------------KPL--YYDNKGNGYDVIAVSYGYNG 104 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 + +++ D G+ I N+Q + + R+ + + Sbjct: 105 QANNNLLH-----DGSGNKI--YPTNEQRSACQSYL-IDAERNIQSAFNYSSSYSLLSKF 156 Query: 179 VEVTARQLD-FLARELSSHPQNLSDG-QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + L ELS ++ + S G + Sbjct: 157 SKKIHEALSTEHKDELSQAFNQITASFEQTDEFSGFFNRFSEALKGAVKGFVHSLAVDFS 216 Query: 237 ASNEQRSWRYLDIINRM------IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 A + + L I + + G +V+L+ ++ +L Sbjct: 217 AYDPNNYAKSLRIYAKEGDNIRGFEEFGTGEQQVLLMAFVKAYMEVFT------GENFVL 270 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 +IE+PE LHP+ + + +Q I +T+S E + ++ + R+ +E Sbjct: 271 IIEEPEAHLHPLAQRWLKEYVVDMCSCGIQVIISTHSAEFIDAEYLDGLVRVHKEGGVTK 330 Query: 348 AWRLGPSGLST------------EDSRRISFH---IRFNRPSSLFARCWLLVEGETETWV 392 A +L L I F+ + ++ +FA +LVEG TE + Sbjct: 331 AIQLSAQQLCDFCIGSGVPENCVSPENIIDFYSTKLFSDQLKGMFAETIILVEGATEYFA 390 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 + ++ G+ G +++ P + + G + + D D K Sbjct: 391 LPVYLKRSGYSLAEHGTEIVNCRGKEAIPLYWRLFKAYGYNCYAIFDCDRNASKTRDVFN 450 Query: 452 SLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS 511 + + E + E + D + F F + + ++ + IS+ H S Sbjct: 451 GIF-CEEEWDTETENCIVRADYAY------FGKDFESYLRTAIDDYTSMEQTISEKYHIS 503 Query: 512 SKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 SKP A +A +P +K + ++L + Sbjct: 504 SKPGKAKAIAQHIEE-----IPHFIKDIADKLLII 533 >UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T068_ACIDE Length = 674 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 110/619 (17%), Positives = 190/619 (30%), Gaps = 110/619 (17%) Query: 1 MILERVEIVGFRGINR----LSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPES-DLYH 54 M L ++ I FR S+ + L+GEN GK++++DA+ L+ + Sbjct: 1 MFLSQLTIKNFRQFGAADPLFSIEFREGVTALVGENDAGKTAVIDAIRHALTTRDMEFMR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGR-HRVRRYRPLEACWTPCTDGYHRIFYR 113 + +DF + + I G Y E Sbjct: 61 VQPEDFHIRT--DGQQATEITIRARLSGLTDGEKGAFAEYLTYEGAEVA---------LY 109 Query: 114 LEGESAEDGSVMTLRSFLD---KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI-- 168 + + R ++D + G + + R L+ + LRDA Sbjct: 110 VHWFARRLSETPGSRRWVDITVRSGPAGEGPPFDATVRQLLATAYLRPLRDAEREMSPGR 169 Query: 169 ----------------------RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIR 206 + ++ L R L + + Q Sbjct: 170 GSRLSQILNNFPEIKKGQPFDPTSPPADAAQAANLSLSGLSDYLRHLVDQHEGIGGAQ-- 227 Query: 207 QGLSAMVQL-LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVI 265 A+ L H A R + + ++ P GRS Sbjct: 228 ---KAINTDYLAHLSLAGEALHGRISFAEGGTDTARLRQILERLELDLLAGPDGRSRGTY 284 Query: 266 LLGLFATLLQAKGTLRL--DKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--------- 314 LG L A L L + D PLLLIE+PE LHP L Sbjct: 285 GLGSNNLLFMACELLLLGKEPDGLPLLLIEEPEAHLHPQRQLRLMEFLEAAAEPLAEGTR 344 Query: 315 -PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRP 373 +Q I T++S L S P++++ L R + A G + LS D R + + + Sbjct: 345 RQVQVIVTSHSPNLTSKIPLQNLVLLHRRGAYSMAE--GHTHLSKSDYRFLQRFLDVTKA 402 Query: 374 SSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR----- 428 + FAR ++VEG+ E ++ LAR G G+ ++ +GL+ + +R Sbjct: 403 NLFFARGLIVVEGDGEALLVPTLARLIGRDLTQHGVSIVNVGGTGLRRYARILQRQDPAK 462 Query: 429 --MGIEWHVLVDGD-------------------------------------EAGKKYAAT 449 I L D D A ++ Sbjct: 463 GVFAIPTACLADMDVMPDCAPRILELVTDDADPKWTSPRRKWRIKREFGATPADRQAGLQ 522 Query: 450 VRSLLNNDREAEREHLTALPALDMEHFMYRQGF-SDVFHRMAQIPENVPMNLRKIISKAI 508 + + ++ + + +E+ + G +V+ + P+N K + Sbjct: 523 AKRVRLSEGDGQNVRTFVADEWTLEYDLAFAGLAEEVYIAAVLAANDDPLNDDKKTHADV 582 Query: 509 HRSSKPDLAIEVAMEAGRR 527 ++K D A V AG R Sbjct: 583 KAAAKLDYAALVVQAAGDR 601 >UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E55 Length = 479 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 84/469 (17%), Positives = 171/469 (36%), Gaps = 27/469 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 + ++ + I FR + L N VLIG N GK++LL A+ + + DD Sbjct: 3 IRIKELRIRNFRSYKSADIDLSDNCVLIGANNVGKTTLLQAIQVAFVRGT---RVGSDDI 59 Query: 61 WFPPGDINGREHHLHIILTFRESLPG-----RHRVRRYRPLEACWTPCTDGYHRIFYR-- 113 + G+ ++ I L + + + + + F Sbjct: 60 YINNGESLPKDRKAIIDLLIVPTDEQNNEVMEFEDKWFEHFGDLRSENPTDLGQFFAMRT 119 Query: 114 ------LEGESAEDGSVMTLRSFLDK--DGHPIDVEDINDQARHLVRLMPVLRLRD-ARF 164 ++GE + + ++ + I D+ + + + RD A Sbjct: 120 VIAFDIVKGEYQVEKKALIEWPKTEEVESYSKYNRNRITDRVLQSIPIFYMDAKRDIASE 179 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQ 223 M+ + V +V + +++ + L + + L+ + + + + Sbjct: 180 MKDRYSYWGKLVKDVGLDEGEIEKIEGVLDEINDTIIERSSVLNHLTKYLSKISKTVNTK 239 Query: 224 GAG---QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 R +R +++ D + I G + I + K Sbjct: 240 EESIKINPVSRKIRDLNRGIDITFKDQDSESFPISNHGMGTRSWITFLTLVAYIAWKNKQ 299 Query: 281 RLDKDA--RPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 D++ PL+L+E+PE LHP ++ +N + Q+I +T+S ++ ++ + Sbjct: 300 MKDEEIPYHPLILLEEPEAHLHPQAQRKIFNQINGIAGQKIVSTHSPMIVGQVDIDDIRH 359 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + +E + + L E+ R+I I R LFA +L EGETE + + Sbjct: 360 ISKEEGMSKINYVDTTELDYEEIRKIRQEIFKTRGDLLFANAIILCEGETEEQALPVFFK 419 Query: 399 Q-CGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKK 445 + GI VI G KP ++ A+ I +++L DG++ K Sbjct: 420 EYFECETFEAGINVISVGGKGKYKPFLRIAKDFNINFYLLSDGEKETIK 468 >UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepID=D2LS06_BACS4 Length = 669 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 84/497 (16%), Positives = 158/497 (31%), Gaps = 62/497 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERDD 59 + RV+I FR + ++L V+IGEN GK++ L A+ ++L P + + D Sbjct: 8 YISRVKIKNFRNYKDVDVVLSHKQVIIGENNVGKTNFLRAIQIILDPKLSDEDRYLNESD 67 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ D + II E H L ++ R+ Y + Sbjct: 68 FFDGLVDPMKNGDEIEII---IEIKGFEHNKSLLSMLADATIRASEPVIRLTYHYFPVTN 124 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 +G + + + + + +L + +R +A R+ + Sbjct: 125 INGKYEYEYTIFQGEKTEVAFNHSHRKYLNLKVIN-AIRDVEAELKNIRRSPINQLLKQY 183 Query: 180 EVTARQLDFLARELSSHPQNLSD--------GQIRQGLSAM------------------V 213 ++ +L ++ +L ++ QI + S + Sbjct: 184 KIDKDELVEISNKLKQQSNDILTIDELVDLQTQINKRFSNVLGNQPYSKIALETVDVDPN 243 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQR---------------SWRYLDIINRMIDRPG 258 ++L G + R N S D + +I Sbjct: 244 RILNTLKLMIGIEKQRPTSETSLGLNNILYISLILLSLEDKTIPSLIKKDTYDELILENE 303 Query: 259 GRSYRVILLGLFATLLQAKGTLRLDK---------------DARPLLLIEDPETRLHPIM 303 + K L + + IE+PE LHP Sbjct: 304 SDILTLCYEKTEKENYSLKQDLNEQNLIDLYSFMDTNHSSTEGFTIPAIEEPEAHLHPTF 363 Query: 304 LSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRR 363 + + + + TT+S + S+ P++ + L + L+ + R Sbjct: 364 QRIIYKDVMKKNTSVLMTTHSPYITSVAPLDSIVHLRATNQGTVVHSTATIELTDGERRD 423 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 + +I + F + +LVEG E ++I A D +GI + KP V Sbjct: 424 LERYIDVKKGEIYFGKGVILVEGIAEEYLIPAFADLLEKPLDLKGIICCNINSTNFKPFV 483 Query: 424 KFARRMGIEWHVLVDGD 440 KF +GI + L DGD Sbjct: 484 KFLDLLGIPYVALTDGD 500 >UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=Q74JQ3_LACJO Length = 578 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 82/465 (17%), Positives = 160/465 (34%), Gaps = 35/465 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M++ RV I GFR + + L ++++IG N GK++ + AL LL + +D Sbjct: 1 MLIYRVNIKGFRNYEDVDVYLNSSSLIIGSNNVGKTNFIYALRLLFD-----RNLSENDL 55 Query: 61 WFPPGDINGREHHLHIILT-FRESLPGRHRVRRYR---PLEACWTPCTDGYHRIFYRLEG 116 D N H + +T + + + + ++ T ++ + G Sbjct: 56 DLLDSDFNAYSHSDKVEITAYLKDINEECLLSEFKGNINEGKLILKYTKEKNQDYILQAG 115 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV 176 S + + RS+L + + N LR R + + + + Sbjct: 116 FSEDTMQELKSRSYLRRLSMQYVDTNRNLYK----------YLRKERQNLLLNSQELLSE 165 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARY----R 231 + + + L+S + +S I+ L + + L E ++ Sbjct: 166 EQKNDDKTKTIEIQKNLNSINEKISSLNYIKNALENVNKELSSLSVENEDQNIQFVAGHN 225 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL 291 + S+ S+ + + ++ +A+ L+ D Sbjct: 226 DAEKMLSDVALSYSSEEGPLTLGGDGRNNQ-------IYLATWRARQELKAGPDHVTFYA 278 Query: 292 IEDPETRLHPIMLSVAWHLL-NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR 350 IE+PE LHP L L Q I T++S ++ + E++ RL + A Sbjct: 279 IEEPEAHLHPHQQRKLAQYLTKSLKGQVIVTSHSPQIAEIFKAENIVRLYFHNKYTEAAS 338 Query: 351 LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIK 410 ++ + F+ LVEG +E LA++ G D I Sbjct: 339 GPNDAQIKNSFNAFNYRLNTLSAEVFFSYGVFLVEGVSEVIFYKALAKENGIDLDRLNIS 398 Query: 411 VIEFAQSGLKPLVKFARRMGIEWHVLVDGD---EAGKKYAATVRS 452 ++ G KP + + I W + D D +KY A ++ Sbjct: 399 ILAVEGIGFKPYINICNALSIPWVLRTDNDIFKNREEKYYAGIKR 443 >UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R009_CLOBU Length = 662 Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 88/523 (16%), Positives = 177/523 (33%), Gaps = 60/523 (11%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERDD 59 + +V + +R ++ L V+IGEN GK++ + AL L+L P + ++D Sbjct: 5 YISKVILKNYRNFKDCTVNLSHKGVIIGENNVGKTNFIKALQLILDPSLSEETRCLSKED 64 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ D + I + + + V + +A + +I Y+ + Sbjct: 65 FFDGLEDPFENNLEIIIEVFLSDYEENGNIVAQLD--DATVNDDGEKKLKITYKYYPIES 122 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 ++G++ + D + + + ++++ +R + + + N Sbjct: 123 DNGNIDYGYTIFKGDNEEYKFTYEDRKYLN-IKVIKAIRDVEREINNSRNSPLNRLIKNY 181 Query: 180 EVTARQLDFLARELSSHPQNL----SDGQIRQGLSAMVQLLEHYFSEQGAG--------- 226 + +L +A LS + ++ I + L+ + ++ Sbjct: 182 CIEKNELKQIADNLSENSADILQLDEILDISKNLNNSFSNIIGLDNDLEVSLKTMNIDPN 241 Query: 227 ----QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG-------------- 268 + L R A + L I+ M+ + L Sbjct: 242 KILNSMKIMLANREAEDVSLGLNNLLYISLMLLSIKDNTIPTFLKKDRYEKLLQCDGSDI 301 Query: 269 -------------LFATLLQAKGTLRLDK---------DARPLLLIEDPETRLHPIMLSV 306 L +G L K +L+IE+PE LHPI + Sbjct: 302 LSKSYEKNKKENYFLKDNLLEEGEKELYKFMDENDPSDGGVTILVIEEPEAHLHPIYQRL 361 Query: 307 AWH-LLNLLPLQRIATTNSGELLSLTPVEHVCRLV-RESSRVAAWRLGPSGLSTEDSRRI 364 + ++ I TT+S + ++ ++ + L R S LS + + Sbjct: 362 IYKDVIKKNDNSVILTTHSTHITAIADIKSIVHLHKRNSGETEINTTASLDLSGPELLDL 421 Query: 365 SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK 424 ++ R + +LVEG E ++I + A G D GI V + KP VK Sbjct: 422 ERYVDIKRGEIYLGKGVILVEGIAEEFLIPKFAEIMGKSLDEIGIIVCNINCTNFKPYVK 481 Query: 425 FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 ++ I + V+ DGD K + D +E E+ Sbjct: 482 LLMQLDIPFTVITDGDFYIIKEGEDKKQFHVLDSISEDEYEKC 524 >UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1_RHILO Length = 608 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 93/478 (19%), Positives = 160/478 (33%), Gaps = 47/478 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNN-VLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++ I FR L + + +N +IGEN GK++LL AL L L S Sbjct: 1 MHISKITIRNFRSFAHLDVRIAENTTCIIGENNTGKTNLLQALRLCLDVNLASSYRSLLP 60 Query: 58 DDFWFPPGDINGREHHLHIIL-TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR--- 113 D + + + I + + + V W D I+ Sbjct: 61 SDIHSAVDLSHPSQVVIAIEIDQWAGKVNEEALVGG-------WQVAPDRARLIYRFRPK 113 Query: 114 ------LEGESAEDGSVMTLRSFLDKDGHPIDVEDIN---------------DQARHLVR 152 L E+ E G + + G D+ D LV Sbjct: 114 LKVRDDLADETIEPGDLTIDDYQWEITGGGDPRHDVATVDWDQDIGVGIRFSDLQSFLVV 173 Query: 153 LMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGL-SA 211 +P LR ++ + + + E+ + D L + L Q +++ + L A Sbjct: 174 HLPALRDVESDLRQTRSSPLTRLIAASEIDHAEKDALVQALRDANQTIAESPTIEALAEA 233 Query: 212 MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID----RPGGRSYRVILL 267 + L ++ R L + D + G ++ + Sbjct: 234 IDASFTKVSGPAFDMGVGLGLAEPSFQAIVKALRILLTNAAVTDFDPAQNGLGLNNILYV 293 Query: 268 GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGEL 327 ++ + L +K A ++L E+PE LHP + + L LP Q I TT+S + Sbjct: 294 SIWIEYFNKR--LAQEKSAGQIILFEEPEAHLHPQLQLALFGALKALPFQSILTTHSTHI 351 Query: 328 LSLTPVEHVCRL--VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 S + L V + + L D + + + + LFAR +LVE Sbjct: 352 TSQADLSSFVVLTNVGVAGTASGVPAENKDLEQNDIADLERFLDATKSNMLFARKVILVE 411 Query: 386 GETETWVINELARQ-CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE--WHVLVDGD 440 G E ++I L ++ D EGI VI K + ++ DGD Sbjct: 412 GPAELFLIPPLVKEVMEIDLDREGIAVIPIYGVHFDVYAKLFTEGSLPKRCAIVADGD 469 >UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepID=Q210V4_RHOPB Length = 695 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 111/518 (21%), Positives = 179/518 (34%), Gaps = 75/518 (14%) Query: 1 MILERVEIVGFR----GINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSP-ESDLYH 54 M + + I FR G + L L+ L+GEN GK++++DAL L+L + +L Sbjct: 1 MYISEIRIENFRLFGVGNDTFVLRLKPGLTALVGENDGGKTAVIDALRLVLGTRDQELIR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG-YHRIFYR 113 E DF PG + + I LTF+ V T G Sbjct: 61 VEATDFHQAPG--GAQAEQICIRLTFKAL-----TVHDRAAFAEYLTYLPGGDVTETALI 113 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQ---ARHLVRLMPVLRLRDARFMRRIRN 170 + + + R L + D AR L+ + LRDA R + Sbjct: 114 ITWNARRNTKEGVSRRTLPSEIRTGAAGDGPVLEGAARALLTATYLRPLRDAE--RAMSA 171 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 G + + +++ +D L + Y S G A Sbjct: 172 GRGSRLSQILQHTKEIKETGVAFDPKASPPADPAKLSVL-----GVGDYASFLFDGSAGI 226 Query: 231 RLMRRRASNEQRS--WRYLDIINRMIDRPGGRSYRVIL---------------------- 266 + R++ ++E D++N I G R V L Sbjct: 227 KEARKKLNDEFLKPLSFANDLLNARIAVSGSRDDAVRLRQLLEKLELALSASDDTDASYT 286 Query: 267 --LGLFATLLQAKGTLRL--DKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-------- 314 LG L A L L + D PLLLIE+PE LHP L Sbjct: 287 RGLGSNNLLFMACELLLLAAESDGFPLLLIEEPEAHLHPQRQLRLMSFLQEQADGVRADG 346 Query: 315 -PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP--SGLSTEDSRRISFHIRFN 371 +Q + TT+S L S +E++ + A+ +GP + LS D R + + Sbjct: 347 QQIQILVTTHSPNLASDIRLENLVMI----EGRKAFPMGPEHTQLSASDYRFLERFLDVT 402 Query: 372 RPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR--- 428 + + FAR ++VEG++ET ++ +AR F G+ ++ GL + R Sbjct: 403 KANLFFARAVMIVEGDSETILLPVIARLLDRDFHRYGVSLVNVGGVGLGRFARIFMRKRP 462 Query: 429 -----MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 + + + D D V L + + E Sbjct: 463 EESGVISVPVACVTDLDVMPDDAPWIVGKLKDGEDVPE 500 >UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methanosarcina RepID=Q469F9_METBF Length = 650 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 113/635 (17%), Positives = 221/635 (34%), Gaps = 105/635 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLL--SPESDLYHFER 57 M L+++ + FR IN ++L L NV+IG N GK+SLLD+L L L S + Sbjct: 28 MYLKKIHVKNFRCINDINLELNSGLNVIIGANNSGKTSLLDSLRLALSIGNYSRSIYVSS 87 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 +DF+ + + + I LTF E P DG H + + + Sbjct: 88 EDFFVD--EFGKKSQTIEIDLTFSELTPED-----MGVFIEMLKVNDDGNHELELHVRYK 140 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG------ 171 + +R + G + I + L ++ + LRD+ + G Sbjct: 141 RERKNGIEKIR--VRYWGGEKEANTIPIEVMELFYIVYLEALRDSENYLKPNRGNKLGQL 198 Query: 172 TVPNVPNVEVTARQLDFLARELSSH---PQNLSDGQ--IRQGLSAMVQ------------ 214 + VP+ + + ++S+ + ++D + I + L Sbjct: 199 FLKLVPDETAQEKHAQQIYESITSNEDWNELITDARKKINEHLENTTLEHDTLRIDIDFA 258 Query: 215 ------------------------LLEHYFSEQG----------AGQARYRLMRRRASNE 240 L+E+ F E+G ++ NE Sbjct: 259 PVDFTKIAERLKIYIPILKKIKRELIENIFEEEGWEKYFEYPHSDKLILKTDIKELLKNE 318 Query: 241 QRSWRYLDI-------INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 S I I + G +I + L + + + LLIE Sbjct: 319 VNSELKFKISKLEKFIQKFEIYQNGLGYNNLIYIATIIGDLIERVNRKSENYIA--LLIE 376 Query: 294 DPETRLHPIMLSVAWHL---LNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR 350 +PE LHP + ++ ++ + +Q T++S + + T ++ V L+ S +V Sbjct: 377 EPEAHLHPQLQNILFNYFKNIESKNIQIFLTSHSPTITAKTDIDTVI-LMENSFKVDILP 435 Query: 351 LGPSGLSTE-DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 L E D + + + + FA + VEG +E +++ ++ G + GI Sbjct: 436 LKDIEFEDETDKKYLQRFLDVTKSQLFFANGVIFVEGISEAMLLHIFSKILGIDLEKNGI 495 Query: 410 KVIEFAQSGLKPLVKFARR------MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAERE 463 +V+ KP K + + +L D DE+ K + +L + E + Sbjct: 496 EVVNIGGVAFKPFAKLFNSEHMDKKIKVRAAILSDDDESDGKISRRASNLNKLNSENLKV 555 Query: 464 HLTALPALDMEHFMY---RQGFSDVFHRM------AQIPENVPMNLRKIISKAIHRSSKP 514 L E+ ++ ++++ ++ + EN N ++ + K Sbjct: 556 F---LGTKTFEYELFLLNGDLLTNLYKKLHPNFPQSNPQENTEKNADYLVKRLKSNKDKG 612 Query: 515 DLAI----EVAMEAGRRGVDSVPTLLKKMFSRVLW 545 + + E+ R VP ++K V+ Sbjct: 613 EFSQLLMMELIENEDTRNKFKVPRYIEKCVKWVVG 647 >UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=C5VAS3_9CORY Length = 679 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 106/511 (20%), Positives = 191/511 (37%), Gaps = 55/511 (10%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNV-LIGENAWGKSSLLDALTLLLSPESDLYH-F 55 M L ++ + FR + L + + V L G N GK++++D + LL Y F Sbjct: 1 MYLSKLTLKNFRQFSEEDPLEVDFQPGVVALAGPNDSGKTAIIDGIRYLLRTRDQDYQLF 60 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRY----RPLEACWTPCTDGYHRIF 111 + DD++ P + + +I E L R R P+++ T TD + Sbjct: 61 QDDDYYISPNNEQANYFTISVIF---EDLSCEDRARYLEYLTYPIDSSGTRKTDEDVILQ 117 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR-IRN 170 L E ++G+ + L + + ++ + R+L+ + LRDA RN Sbjct: 118 LTLRVEKKKNGNRFWNDAKLYCGSEALVGKIVDSETRNLLACTYLRPLRDAEHEMSSGRN 177 Query: 171 GTV-------PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 + P++ + E + + + L ++ E Sbjct: 178 SRLSQVLKQFPSINDGEKIINGYIPTSDNELRELSLSGLSDLLKILINDNNSIKEATDEL 237 Query: 224 GAGQARYRLMRRR-----------ASNEQRSWRYLDIINRMIDRPGGRSYR-VILLGLFA 271 ++R A+++ + + L+ ++ + G+S R LG Sbjct: 238 NQKHLTNLILRNESITGEFTFTTGATDDAKLQQVLEQLDLTLKGSEGQSDRGRFGLGSNN 297 Query: 272 TLLQAKGTLRLDKD--ARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNS 324 L A L + K PLLL+E+PE LHP L +Q I +T+S Sbjct: 298 LLFIACELLLIAKGDIGFPLLLVEEPEAHLHPQRQLQLLEYLLEQAEGTSKIQVIISTHS 357 Query: 325 GELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 L S VE++ + + + G + LS D +S + + + FA ++V Sbjct: 358 PILTSKVKVENIILV--NHGKAHSLAKGKTQLSNNDYSFLSRFLDVTKSNLFFAENLIIV 415 Query: 385 EGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 EG+ E +I +A+ G+ GI +I GL+ + +R DE + Sbjct: 416 EGDAEELLIPVIAKLIGYDLTKHGISIINVGGVGLRRYSRIFQRK----------DENAQ 465 Query: 445 KYAATVRSLLNNDREAEREHLTALPALDMEH 475 V ++ + D E ALP L EH Sbjct: 466 PVGIRVSNITDRDLIPE----AALPILGYEH 492 >UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio cholerae 623-39 RepID=A6AH64_VIBCH Length = 283 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 4/235 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ LIGEN WGKSSLLDAL+++L + LY F DF Sbjct: 1 MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + +L IIL F S + RYR L+ W G +I YR+ + Sbjct: 61 HVDYSIADAQTQNLQIILVFAASDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + T +FLD +G+ + + A+ L+ L PV+RL+D+R R ++ N N Sbjct: 121 -YDISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSR--RFEKSLANGNGKNAR 177 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 V +++ R L + P +++ G+IR LSAM L+EHYFS + + R R Sbjct: 178 V-EKRISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFSFKSQSRKNPRRERD 231 >UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEM8_ANADE Length = 758 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 102/533 (19%), Positives = 179/533 (33%), Gaps = 101/533 (18%) Query: 1 MILERVEIVGFRGINRLSLMLE---QNNVLIGENAWGKSSLLDALTLL--LSPESDLYHF 55 M L + I FR + +E NV++GEN GK++++DAL LL L P + Sbjct: 96 MHLATLRIENFRCFGSSGITIEFQAGMNVILGENNVGKTAIVDALRLLFSLGPGRRDVYV 155 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 + DF+ G H + + F V P ++ R Sbjct: 156 QPQDFYCAAG--GEPAHEIRLDAIFEGLSNAEQGV-----FYELLVPGPPVSAQVHLRFR 208 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT--- 172 E+ S + G ++ + + LV M + LRDA R + G Sbjct: 209 LETVGGQSRVRQ----TVWGGEVEGQPVPPAVWELVSHMYLGALRDAESDLRPQRGGRVG 264 Query: 173 -------------------VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLS--- 210 V + + A ++ H L+ ++RQ + Sbjct: 265 HLVKRVISDPVDRARVEAHVRQANRFILAEGGIQRTAEMINDHLSELAGNELRQSVRISL 324 Query: 211 --------------AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMI-- 254 + Q E F ++ L +R +N R + +R++ Sbjct: 325 GAPAFERVADTLRLLLPQAGESEFVAVYDVESWKELRQRAGANANLLDRVSEDGDRVLIR 384 Query: 255 ----------------------------DRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 D+ G +I +G+ L + L + Sbjct: 385 LGHLGKPEQEKLGELYAELLDHVEPFGVDQNGMGYNNLIYMGVVLGDLVERRKAGLQNYS 444 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLL--------PLQRIATTNSGELLSLTPVEHVCR 338 LLIE+PE +HP + + + L+ +Q T++S L S ++ + Sbjct: 445 A--LLIEEPEAHIHPQLQVLVYDFLSRTSVIDDAGNQVQVFVTSHSPTLTSRASLDSLIV 502 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + R RV A L L + ++ R LF+R +LVEG +E + LA+ Sbjct: 503 MHRAEGRVTATALRRCPLDENQKADLRRYLDVTRSQLLFSRAVVLVEGISEALLFPVLAK 562 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFA------RRMGIEWHVLVDGDEAGKK 445 + G+ FD ++V+ A P RR+ I ++ D D + Sbjct: 563 RAGYRFDHSAVEVVAVAGVSFAPFAALFNSDEPARRLHIPCALVTDDDRCAGE 615 >UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteobacteria RepID=A6SWS1_JANMA Length = 605 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 87/454 (19%), Positives = 157/454 (34%), Gaps = 30/454 (6%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M L + I FR + L + NVL+G N GKS+++DAL LL+ + + Y + Sbjct: 1 MHLAELNITNFRKLRDAKLRFQAGLNVLVGANNVGKSAVVDALRALLAGQEEPYPRLDVA 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG-E 117 D P + H + + A DG I + + Sbjct: 61 DRHRPAEGEPEGDIDFHYVFRGLDRDD-------EADFLAALKAGGDGQMEIHIHVRYFD 113 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR-FMRRIRNGTVPNV 176 + + G R D + P+ + + + ++ LRDA +R RN + + Sbjct: 114 ADKTGRFRVKRWCGDHEDVPLLSDMMENLRGVYLQ-----PLRDASQSLRPSRNSQLSRL 168 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 ++ D + L + L + + + QA + Sbjct: 169 LHLLTDDAGRDGINAALQKLDEELKQHAPMISTQSAIATRHGDMLGEQLKQALTVGLSAS 228 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 S L + I++ G +I + + + L AK T + L++E+PE Sbjct: 229 DFQRLSSRLSLSVDQFEIEQNGLGFNNLIFMAVVLSEL-AKNTDATYRG----LIVEEPE 283 Query: 297 TRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW 349 LHP + +V L L P+Q T++S S ++ + LV V + Sbjct: 284 AHLHPQLQAVLLRYLASLQAVAGEKPVQLFVTSHSPNFASNANLDCLACLVESEGHVETF 343 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 ++ ++ R FAR + VEG E +I+ LA G+ G+ Sbjct: 344 FPRDVTFEKGKREKLERYLDVTRAEIFFARRVIFVEGAAELMLIDALATLAGYDLRGHGV 403 Query: 410 KVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDE 441 +I + + I ++ D D Sbjct: 404 SLISVEGLNFDSFLPLFGENALKIPVALITDADP 437 >UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLY5_9FIRM Length = 663 Score = 228 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 91/534 (17%), Positives = 188/534 (35%), Gaps = 68/534 (12%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHF 55 M L+++ I FR + + + L + N +IGEN GKSS++DAL ++ S F Sbjct: 1 MYLKKLIIKNFRIFDEMGIELIFNKGVNAIIGENNSGKSSVIDALRIVYSTVTYRKDIFF 60 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGR-HRVRRYR--------PLEACWTPCTDG 106 + DF + L + E P Sbjct: 61 SKSDFHVCEDGTVVDYTQFDVYLEDVPRRMTEIWNPQSESGMGGDFHIKFEKYIAPNGTE 120 Query: 107 YHRIFY--------RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 R Y +L ++ E V+ L + D + + + A+ L L+P Sbjct: 121 KVRSVYWGFGTEGNQLSSDTFEATDVVFLGALRDSESE-MKPSRNSKLAQLLRNLVPEEA 179 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQ------LDFLARELSSHPQNLSDGQ-----IRQ 207 +R+ ++ + N + ++ + L + +E + ++ + I Sbjct: 180 VRE-ELVQILNNANNDLLKKEQLKKTRNTINQNLARIEQEFLNQQIDIGLVEPRFDSIAS 238 Query: 208 GLSA-------MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN--------- 251 L A ++ + + +++ + + + + I++ Sbjct: 239 SLRAWVKPKWILINKEDAVYETAHTYFQSNMDLKKIQDDAKGIYFEISILDSETELDKKV 298 Query: 252 -RMIDRPGGRSYRVIL--LGLFATLLQAK--GTLRLDKDA--RPLLLIEDPETRLHPIML 304 I +S+ + LG L + G + +++ + LLL+E+PE LHP + Sbjct: 299 ADRISEIANKSFELYQNGLGYNNLLFMSAVLGDMAIERGGVYQNLLLVEEPEAHLHPQLQ 358 Query: 305 SVAWHLL-----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 + L N +Q I T++S L S ++++ L + + L+ E Sbjct: 359 ELVHDFLSDANKNDGNIQIIYTSHSPTLASKIDIDNINLLYEYGHKKYCLPFSQTNLTEE 418 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 + + + ++ + FAR L VEG +E ++ +A+ G F+ ++++ Sbjct: 419 NKKYLQRYLDVTKSQMFFARGILFVEGISEAILLPAMAKALGRPFEKYAVELVNVDSVAF 478 Query: 420 KPLVKFARRMGI-----EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTAL 468 P V + + V+ D D KK + + E T L Sbjct: 479 TPFVNLLSSDKVKTCFSKVSVITDDDRCAKKNEKDYIDKNYDYDDVSSEVATNL 532 >UniRef50_B8GG54 SMC domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GG54_METPE Length = 623 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 94/496 (18%), Positives = 166/496 (33%), Gaps = 67/496 (13%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYH-FER 57 M LE++ I G++ N + NVL+GEN GKSS++DA+ L+LS + Sbjct: 1 MFLEKISISGYKNFNENFEICFSSGLNVLVGENGVGKSSIIDAIRLILSEDEYGRSGISE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF P + + + I+ F E + P + + L + Sbjct: 61 KDFHRPFVKDSVASNKIKIVAHFDELSDFEEIA---------FLPWREDKNEARLSLVID 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA----------RFMRR 167 ++ R G + L+ + + LRDA R R Sbjct: 112 DTQNN---RGRYNRKIWGGVSQSNPYEKELVELINCIYLPPLRDAEAKLREGRGSRLARL 168 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 I N + + L + +++S ++ + + A + + G Sbjct: 169 ILNLNKEEFLKAKRDGKSL-KIEEKVNSFYNDIVNDKNEPIFKANELIKNSLKNAIGTVF 227 Query: 228 ARYRLMRRRASN-----EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA------ 276 + ++ +N E + IN+ RS LG + A Sbjct: 228 GQDTRIQFSETNINRIIENLRLFFFPEINQNGQEFNYRSLEENSLGYNNLIYLATVLAEL 287 Query: 277 ---KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLS 329 K + + +LLIE+PE LHP + L +Q I TT+S L S Sbjct: 288 RPIKEVESDEPEFLKILLIEEPEAHLHPQLQIKLLKYLQKETENSNIQIIITTHSPVLAS 347 Query: 330 LTPVEHVCRLVRESS-RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 ++ + L + A + GL + ++ + + + FA+ +LVEG Sbjct: 348 AVSIDAIIHLSFSKDRKTIATPIRKCGLPSPSKAFLTRWLDATKSTIFFAKGVILVEGIA 407 Query: 389 ETWVINELAR------------QCGHHFDAEGIKVIEFAQSGLKPLVKFA--------RR 428 E +I ELA+ + + +GI VI K ++ Sbjct: 408 EAMLIPELAKRVIKKYNSEYKTKLPGTLEEQGISVININGINFKHFMQLFCNINEDSQPA 467 Query: 429 MGIE--WHVLVDGDEA 442 I + D D Sbjct: 468 FSIPLRCVGITDNDPP 483 >UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IU32_9BACE Length = 602 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 98/596 (16%), Positives = 203/596 (34%), Gaps = 66/596 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M L R+ I FR + ++L + N+LIGEN GK++++DAL + L + + + Sbjct: 10 MYLSRLHISKFRVFDDITLYFKNGINILIGENNSGKTAIIDALRICLGCGKPDNFIYVQD 69 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D P + + + L F G + R + D + +L + Sbjct: 70 GDLHVNPENPSEINTVIQFDLIF---EFGDASIEREC-FYDFISQDKDNPDKQTIQLHLK 125 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRN------- 170 ++ + G + + + ++ + + LRDA R + Sbjct: 126 FIQENNGKKKYFKRIIWGGDNEGQQVPYESLQEIFYTYLSPLRDAVSCLRPYSYDNKTSQ 185 Query: 171 ---------GTVPNVPNVEVTARQLDFLARELSSHPQ-------NLSDGQIRQGLSAMVQ 214 ++P E + L ++ + ++ + L Sbjct: 186 LFNQLTKYDKGNESIPLNEEKKKSLAKNLYQIFENDAYDWKHILTTGKSKVNEHLEGTGI 245 Query: 215 LLEH------YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG 268 L+H Y + + R ++ + + + + G +I Sbjct: 246 TLKHPDIEMRYVGREFSDVVRGIELKCPVYKTVEAGQEQKYF--TLSQNGLGENNLIFTS 303 Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP---LQRIATTNSG 325 + L + + LL+E+PE LHP + + LN L LQ T++S Sbjct: 304 VVLGDLINRCE-DHALEIYNALLVEEPEAHLHPQYQNTFFEYLNELQSKGLQVFVTSHSP 362 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWR---LGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 + + + V ++ L R+ S + ++ L E R + + + FA L Sbjct: 363 TITAKSDVNNISILQRKQSIIQSFSFDELSEDDYPKESKRHLRKFLDTTKAQLFFANGVL 422 Query: 383 LVEGETETWVINELARQC---GHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEW 433 LVEG E +I LA++ GI+++ R+ + Sbjct: 423 LVEGVAEAIIIPILAKKFLTEKIDLCKSGIELVNIGGVAFNHFGLLFNNDDERKRLLSKC 482 Query: 434 HVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD-MEHFMYRQG------FSDVF 486 ++ D D K + ++ E+ +L A +EH ++ Q DV+ Sbjct: 483 AIITDSDP---KDNGDISDRAQKAKDLEKHNLKVCLATHTLEHDLFEQSERNKAIMRDVY 539 Query: 487 HRMAQIPENVP--MNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 ++ +++ N+ ++ K K + A+++ VP +K Sbjct: 540 RKIHAQTDDLSGDFNVSTLMKKLKSNKDKAEFALQLCDRLETEVAFDVPDYIKDAI 595 >UniRef50_B4BQS2 SMC domain protein n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BQS2_9BACI Length = 629 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 88/481 (18%), Positives = 170/481 (35%), Gaps = 49/481 (10%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L ++ I GFR N + L + V++GEN GKS+++DA+ L+L+ + + Sbjct: 1 MHLSKLVIEGFRCFNEKAEIPLNKGLTVILGENGSGKSAIVDAIRLILNDDEFGKSMVSE 60 Query: 59 -DFWFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DFW G+ N I + F + P + +++ Sbjct: 61 RDFWHSFGESKNESSTSFRIDIEFSKLKPVEQVA-----YLPWLKTEDLSTASLHLKVQN 115 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRIRNGTVPN 175 ++ ++ + G ++ + LRDA +R +R + Sbjct: 116 KTNQN-----KHYKKELWGGNSSSSSFEWDTYKSIQCTYLPPLRDAEHRLRDVRGSRLAR 170 Query: 176 VPN-VEVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARY--- 230 + +E + L + + Q L + I + + + L E+ A Sbjct: 171 LITKIEPENSAKERLVETVKQNNQQLLKDELIVKAKTNIKSRLVETLGEKLAQDISISFS 230 Query: 231 -RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL---LGLFATLLQAKGTLRLDKDA 286 R N + + + ID S + L AT+L + + + Sbjct: 231 DTRFERIIENLKLLFYPFLDDSTSIDEFRELSENSLGYNNLIYLATVLAELEDVNEQEIS 290 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSLTPVEHVCRLVRE 342 +LLIE+PE LHP + + + +Q I TT+S + + ++++ + + Sbjct: 291 CKILLIEEPEAHLHPQLQTKLLEYIEKQAKLKGVQVIVTTHSPTIAASIDLDNILVVNKT 350 Query: 343 --SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 + L GL+ + + + + + LFAR +LVEG E VI ELA++ Sbjct: 351 ELNRSPVIVPLTNVGLTPKQKFFLQRWMDITKSTLLFARGIILVEGIAEALVIPELAKRV 410 Query: 401 ------------GHHFDAEGIKVIEFAQSGLKPLVKFA-----RRMGIE--WHVLVDGDE 441 + + + +I + + R GI + D D Sbjct: 411 LHKHLASKDRISEYSLEEYSVSIINMGGIYFESFFQLFINAEKRGEGIPIRCAGITDCDP 470 Query: 442 A 442 Sbjct: 471 D 471 >UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillus cereus MM3 RepID=C2PGZ2_BACCE Length = 592 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 84/539 (15%), Positives = 178/539 (33%), Gaps = 56/539 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E ++I GFR + ++ + ++IG N GK++L+ AL LL D Sbjct: 1 MKIEWIKIKGFRNFDNETINFAEQTLIIGANDIGKTNLIYALRLLFDRSLSDRDL---DL 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 ++ + + I + + + +G I Y ++++ Sbjct: 58 LSSDYNVYTKADSIEITVKLVDVKED-------CLITVFKGDLNEGTVYIQY----KNSK 106 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 +G L +++++ + L + V R+ + +E Sbjct: 107 NGEYSILSG---PSEEAVEIKNSRFYIKRL-NMEYVNTNRNLESFMK-----REKNQILE 157 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA-SN 239 +L ++ S +I++GL + + ++ Q + + A N Sbjct: 158 DAKLKLTEQQTQMDEQ----SIFKIKRGLEVVNKRVDRLNYIQQSLSKVNEELGSLAIHN 213 Query: 240 EQRSWRYLD---IINRMIDRPG---GRSYRVILLG-------LFATLLQAKGTLRLDKDA 286 E + + + RM+D + LG +F +K + Sbjct: 214 ESQELSFKNANSDAARMLDNLELTYSTQEGALTLGGDGRNNQIFLATWISKQKNIKSLEK 273 Query: 287 RPLLLIEDPETRLHPIMLSVAW-HLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 IE+PE LHP +LL Q TT+S + S + + +L + Sbjct: 274 VTFYAIEEPEAHLHPQQQRKLSSYLLEKFDEQVFITTHSPHIASEFKPDRIVKLYSKKKC 333 Query: 346 VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 + G S D + + F L+EG +E LA+Q D Sbjct: 334 TKVAKGGCSEEIKLDFDDFGYRLDAITSDVFFVNAVFLIEGPSEKLFYTALAKQLDIDLD 393 Query: 406 AEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 + +I G KP +K + I + + D D + + ++ E + + Sbjct: 394 RLNVSIISVNGIGFKPYIKICLALDIPFVLRTDND------------IFSKTKKIEEKDV 441 Query: 466 TALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEA 524 + M ++++ A ++ ++ + ++P A +A Sbjct: 442 EFSFQGGISRVM--GIYTELLQTEANQSLITYWGEHEVENEWLKNETRPQAASNLAEYI 498 >UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fischeri MJ11 RepID=B5FD69_VIBFM Length = 648 Score = 220 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 107/519 (20%), Positives = 183/519 (35%), Gaps = 55/519 (10%) Query: 1 MILERVEIVGFRGINR-LSLML-EQNNVLIGENAWGKSSLLDALTLLL-SPESDLYHFER 57 M L +++ GFR ++ S+ L ++ NV++GEN GK++++ A+ L ES Y Sbjct: 1 MYLSKLKAEGFRCFDKGFSVKLTDELNVIVGENGAGKTAVISAIRQLFQDSESGRYSVTS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF+ P I F + + P L+ E Sbjct: 61 DDFFNPFVAGGKAATSFSICAEFDGLDVKD---------KVAFLPWVGSSDTALLNLQAE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA----------RFMRR 167 + E + R G + + LV+ + + LRDA R + Sbjct: 112 NKE----IRGRFKKVIWGGKSKSSQFDPELLDLVQCIYLPPLRDAESKLSNGRQSRLSKL 167 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 ++ + + L L L S ++L+ A + E+ G Sbjct: 168 LKALNRKQLKQCRKDDK-LHPLEASLKSFNESLATDDKLSIKDANKLITENLTKAIGHHF 226 Query: 228 ARYRLMRRRASNEQRSWRYLDII---------NRMIDRPGGRSYRVILLGLFATLLQAKG 278 + ++ S+ + L ++ + S L L+ + A+ Sbjct: 227 GQKTSIQFAESDFTKISESLTLMFFPDLSAEDQELFRDLSQNSLGYNNL-LYIASIMAEL 285 Query: 279 TLRLDKDARPL---LLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNSGELLSL 330 TL D + +P+ LLIE+PE LHP + L + +Q I TT+S L S Sbjct: 286 TLDEDDEEQPIFKLLLIEEPEAHLHPQLQIRLLTHLKSVAEKNKNVQVIVTTHSTVLASS 345 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 +E + L R V A L GL T S+ I+ + + + LFA +LVEG E Sbjct: 346 VELESIIHLSRSPEPV-ATPLRTCGLPTASSQFINRWLDVTKSNLLFANGVILVEGIAEQ 404 Query: 391 WVINELARQC------GHH-FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAG 443 +I LA+ G + + GI I K ++ + + + G Sbjct: 405 MIIPTLAKIVLKEQMDGRNSLEDLGISTINLNGIYFKHFMQLY--CNVSTSDDTEEETVG 462 Query: 444 KKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGF 482 + + + D + P D E Q F Sbjct: 463 ESIPVRCAGITDLDPPKTIKKQVPNPQKDGETVEVTQDF 501 >UniRef50_A6AAK9 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio cholerae 623-39 RepID=A6AAK9_VIBCH Length = 617 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 85/463 (18%), Positives = 181/463 (39%), Gaps = 42/463 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYHFERD 58 M L +++ FR +L + N+L+GEN GK++++D++ +L+ +S + + Sbjct: 1 MYLHCLKLENFRRYKQLEVEFNSGLNLLVGENDSGKTAIIDSIKYVLNTQSYEYLRPCIE 60 Query: 59 DFWFPPG-DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF+ P D + R I F+ + + + + + Sbjct: 61 DFYLDPTQDESHRSSEFRIECVFKGFDKEEA-----KHFIDWIGTDDEKNYFLKIWMCAS 115 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN-- 175 D +R+ D +G ++ + AR L+R + LRDA + G+ + Sbjct: 116 RKNDRVFYDVRAGSDDEGSQVNGD-----ARDLLRATYLKPLRDAESELTPKKGSRLSQI 170 Query: 176 VPNVEVTARQLDF-LARELSSHPQNLSD----GQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + N EV A + D L R +S + + ++ L+ + LE++ E +R+ Sbjct: 171 LYNHEVFANEEDNRLLRIMSLTNKAIEKFFTHYDGKELLTDVNTYLENFSLENNKLNSRF 230 Query: 231 R--LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 ++ E+ S + + + G S+ ++ + LL+ L Sbjct: 231 NVSDSSLKSVLEKLSLKLFNQSVSENNNQGLGSHNLLYIAAELLLLKKSNYQGLKLG--- 287 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESS 344 LIE+ E LHP + + +Q I TT+S L S ++++ L ++ Sbjct: 288 --LIEEIEAHLHPQTQIRLIEAIQKISEENKIQLILTTHSTSLASKVKLQNLV-LCKDG- 343 Query: 345 RVAAWRLGP--SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 + +G + L D + + + + FA +LVEG+ E ++ A++ G Sbjct: 344 --CLYPMGKEYTKLREGDYLFLERFLDSTKSNLFFANGVILVEGDAENILLPSFAKKLGF 401 Query: 403 HFDAEGIKVIEFAQSGLKPLVKFA-----RRMGIEWHVLVDGD 440 G+ ++ + +++ ++ ++ D D Sbjct: 402 DLSQYGVSIVNVGSTAFLRYANIFLRKDNKKLNLDISLITDVD 444 >UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BE02_RALP1 Length = 553 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 95/540 (17%), Positives = 182/540 (33%), Gaps = 54/540 (10%) Query: 24 NNVLIGENAWGKSSLLDALTLLLSPESD-LYHFERDDFWFPPGDINGREHHLHIILTFRE 82 NVL+G N GK++++DAL +LLS + D D + F Sbjct: 4 LNVLVGPNNAGKTAVVDALRVLLSAGDEGALRVSSYDLHVT--DAGAQSAQATFSYVFAG 61 Query: 83 SLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFL-DKDGHPIDVE 141 L+ + + + + +D + +R + D + +PI E Sbjct: 62 LSKSE-EADFLTALKPTTNAKGETEYEAHLTVRYSNPDDSGRLRVRRWCGDHEDNPIASE 120 Query: 142 DINDQARHLVRLMPVLRLRD-ARFMRRIRNGTVPN-VPNVEVTARQLDFLARELSSHPQN 199 + D R + + LRD A+ +R R+ + V + A + + + + Sbjct: 121 MLEDL-----RAVYLPPLRDPAQGLRPSRSSQLARLVQRLSDDASRQEVVETLTKLDTEL 175 Query: 200 LSDGQIRQGLSAMVQL----LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID 255 + I +A+ + L S++ A +R A+ + D ++ Sbjct: 176 RAKKPITDTQAAITKRHTDMLGKVLSQKLAVGLSPSDFQRVAARLALAVADFD-----VE 230 Query: 256 RPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL---- 311 + G +I + + + L L++E+PE LHP + +V L Sbjct: 231 QNGLGFNNLIYMAVVLSELSLNKEAAYR-----ALIVEEPEAHLHPQLQAVLLQYLKSVE 285 Query: 312 ----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFH 367 N P+Q T++S +L ++ + + S V ++ + Sbjct: 286 TPAVNENPVQVFVTSHSPNFAALADIDSISCIYEASEAVGCLAPREIAFEKRKKEKLQRY 345 Query: 368 IRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA- 426 + R FAR +LVEG E +++ +A + G + VI + Sbjct: 346 LNVTRAEIFFARRIILVEGTAELFLVEAMAHKLGIDLRKHSVSVISTDGLNFDAFLPLFG 405 Query: 427 -RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDV 485 + + V+ DGD G E + D F Sbjct: 406 ETALKVPVAVVTDGDPTGIYP------QPGEHHEPSATAKSIQAQSD--------TFVRP 451 Query: 486 FHRMAQIPENVPMNL--RKIISKAIHRSSKPDLAIEVAMEAGRRG-VDSVPTLLKKMFSR 542 F + ++ M R + +A+ + P +A ++A + D L K MF R Sbjct: 452 FLAAKTLEYDLAMTATNRATMLEAL-KDLHPGIAKDLAADVEAAKDEDKAKVLFKGMFER 510 >UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1TJY9_ACIAC Length = 712 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 97/507 (19%), Positives = 171/507 (33%), Gaps = 69/507 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++ +V +R L+ ++ N +IGEN GK++L A+ LLL Y E Sbjct: 1 MHISKLSLVNYRNFANTKLLFQKGINTIIGENGSGKTNLFRAIRLLLDDNMIRSAYRLES 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY---------- 107 DF G G H + I L F E +R G Sbjct: 61 TDFHRGLGRWQG--HWIIISLEFEEISADEAVQALFRHGTGGIDDEAIGKATYNLIFRPK 118 Query: 108 HRIFYRLE---------------------------GESAEDGSVMTLR----------SF 130 I RL G S D + F Sbjct: 119 KEIRLRLSQLDDGDHAGLAAILNPVTLDDYETIFTGRSDADFNDEAFYKEVVGDFEKARF 178 Query: 131 LDKDGHPIDVEDINDQ--ARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDF 188 ++ P I + V LRD N T P + ++ + +D Sbjct: 179 NEEIEFPAIGAKIPSVLSVSKEISFTFVQALRDV-VSEFHNNRTNPLLSLLKGKSGDIDP 237 Query: 189 LARELSSHP-QNLSDG-QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 +A +L + + L+D + + + + + + ++ + + Sbjct: 238 VAFQLITDGVKALNDSIEALPDVQVVRSDISDTIKDAAGEAYSPSSLSIKSDLPDEADKL 297 Query: 247 LDIINRMIDRPGGR--------SYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + + G S L L + + LLIE+PE Sbjct: 298 FQSLKLFVGESGEGHEGPIHELSLGGANLIFLTLKLLEFKYQKAKQSIANFLLIEEPEAH 357 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 +H + + L Q I +T+S + ++ V++V L RE R A++ +GL Sbjct: 358 IHTHIQKTLFDRLQYDDTQIIYSTHSTHISEVSNVQNVNILGRERDRCEAYQ-PSTGLGP 416 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ-CGHHFDAEGIKVIEFAQS 417 E+ I ++ R + LFA+ +LVEG+ E +I L ++ G D GI +I + Sbjct: 417 EEIGNIQRYLDAVRSNLLFAKSVILVEGDAEEILIPILVKKVLGISLDELGISLINIRST 476 Query: 418 GLKPLVKFARRMGI--EWHVLVDGDEA 442 G + + I ++ D D++ Sbjct: 477 GFQNVAVLFHDDRIRKRCSIVTDLDKS 503 >UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaproteobacteria RepID=C4LF54_TOLAT Length = 650 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 100/518 (19%), Positives = 179/518 (34%), Gaps = 72/518 (13%) Query: 1 MILERVEIVGFRGI-NRLSLML-EQNNVLIGENAWGKSSLLDALTLLL-SPESDLYHFER 57 M L ++I GFR ++ L NV++GEN GK++++ A+ L ES Y Sbjct: 1 MYLSNLKIQGFRCFDKDFNVQLTNGLNVIVGENGAGKTAIISAIRQLFHDSESGRYSITS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF+ P I F + P + ++ E Sbjct: 61 DDFYSPFIAGGLAATSFSIGAEFDGLDVMD---------KVALLPWVGASNTALLNIQAE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA----------RFMRR 167 + E + + G + + L++ + + LRDA R + Sbjct: 112 NRE----IRGQFKRVIWGGKSKSSQFDPELLDLIQCIYLPPLRDAESKLSNGRQSRLSKL 167 Query: 168 IRNGTVPNVPNVEV------TARQLDFLARELSSHPQNLSDGQIRQGL-SAMVQLLEHYF 220 ++ + + + L++ LS + + + + + H+F Sbjct: 168 LKALNRKKLKQCRIKGELHPLEESVKEFNESLAADD-KLSIKDANKLITENLTKAIGHHF 226 Query: 221 SEQGAGQARYRLMRRRASN------EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 +Q + Q + A + S + + G + + + + A L Sbjct: 227 GQQTSIQFAESDFTKIAESLTLMFFPDLSVEGVVSFRELSQNSLGYNNLLYIASILAELT 286 Query: 275 QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNSGELLS 329 D+ LLLIE+PE LHP + + L + +Q + TT+S L S Sbjct: 287 LDDEDEYEDQPLFKLLLIEEPEAHLHPQLQIRLLNHLKKVAEENKNVQVVVTTHSTVLAS 346 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 +E + L + S A L GL+ + S+ I+ + + + LFA +LVEG E Sbjct: 347 SVEIEAIIHLSK-SPVPVATPLRTCGLTPDSSKFINRWLDVTKSNLLFASGVILVEGIAE 405 Query: 390 TWVINELARQC-------GHHFDAEGIKVIEFAQSGLKPLVKFA---------------R 427 +I LA+ G + GI VI K ++ Sbjct: 406 QMLIPILAKIVLEDQKEGGKSLEDLGISVINLNGIYFKHFMQLYCDIESADDSEGKTITE 465 Query: 428 RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 + I L D D K R + ++D+E E + Sbjct: 466 NLPIRCAGLTDLDPPKK----VTRQVPDSDKEGETREI 499 >UniRef50_C3B2Y6 Putative uncharacterized protein n=2 Tax=Bacillus cereus group RepID=C3B2Y6_BACMY Length = 707 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 97/574 (16%), Positives = 198/574 (34%), Gaps = 62/574 (10%) Query: 1 MILERVEIVGFR--GINR-----LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSP-ESD 51 M L+ + + FR GIN +++ L NVL+GEN GK++++D + LL D Sbjct: 1 MYLKSISLYNFRQFGINDDGSPGITVHLNPKFNVLVGENDSGKTAIIDGIKYLLGSVSDD 60 Query: 52 LYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG--YHR 109 ++DF+ D+ + + I T R + R Sbjct: 61 YEKISQEDFFSLSKDVYSDQFFIEGIFT-------ELSDREAGAFLEWLSFDAQNNYTLR 113 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA--RFMRR 167 I R+E E+G+ R L G ++ +AR++++ + LRDA Sbjct: 114 IILRVEKRKNENGTEFIDRKLLA--GEKDFESRLDSKARNVLKTTYLKPLRDAGSELKPG 171 Query: 168 IRNGTV------PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL--LEHY 219 R+ V P +E +L + + + + + + G S + + L Sbjct: 172 FRSRLVHILKAHPTFKGIEEQNHRLVEVMKAANEEIEKYFENEYTDGHSLINDIENLLSD 231 Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 F + ++ R L + ++ G + + L Sbjct: 232 FYDNLDQSKSKAKFAVTQTDLTSILRKLSLNTEDVNLGLGNLNLLFIATELLLLNNYMAG 291 Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLN------LLPLQRIATTNSGELLSLTPV 333 L + LIE+ E LH L Q I T++S L++ Sbjct: 292 NEL--IGPKITLIEEIEAHLHTQAQIRLIKFLESELEGEENKSQFILTSHSSNLVASVDP 349 Query: 334 EHVCRLVRESSRVAAWRLGP--SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETW 391 +++ L + A+ L + L D + + + + + FA+ +LVEGE+E Sbjct: 350 KNIILLHNQ----KAYPLNEQYTMLDENDYKFLERFLDSTKSNLFFAKGIILVEGESEML 405 Query: 392 VINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR------------RMGIEWHVLVDG 439 ++ LA+ G+ G+ ++ + + +K + I ++ D Sbjct: 406 LLPALAKLIGYPLHKSGVSIVNVRGTSFERYIKLFSRSVLWKTQMQLPALDIPISIITDI 465 Query: 440 DEAGKKYA---ATVRSLLNNDREAEREHLTAL---PALDMEHFMYRQGFSDVFHRMAQIP 493 D Y +S+ N + E + + + P +++ +S + Sbjct: 466 DIKPYIYYEVEERDKSIFNIESEIQLDTILHCISEPKEELKLDYIGNDYSTLKKLAKDFG 525 Query: 494 ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRR 527 V ++ I + D +++ + + Sbjct: 526 FKVTDENEVELTSLIKKDITRDYLSQISEDKRKN 559 >UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria RepID=C0YH13_9FLAO Length = 703 Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 98/571 (17%), Positives = 184/571 (32%), Gaps = 80/571 (14%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M + + I FR E N +IGEN GK++L AL +L+ Y +F + Sbjct: 1 MYISGLSIRNFRNFKSAHFKFTEGINTIIGENGSGKTNLFYALRILIDDSLPRYINFNSN 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE--- 115 DF G+ G H + I + F C + G + +++R + Sbjct: 61 DFNRGIGNWAG--HWIVITVFFEGLDASEEAQALAVQSSGCMDTPSKGSYSVYFRPKYQF 118 Query: 116 ---------------------------------------GESAEDGSVMTLRSFLDKDGH 136 G+ ++D + DK Sbjct: 119 RKELYDYSILAEKDSEGLELLLDKITIADYEVVYLSRGSGDFSDDVTYEKYVGNFDKIEF 178 Query: 137 PIDVEDINDQARHLVRL----------MPVLRLRDAR-FMRRIRNGTVPNV-----PNVE 180 P E + + LRD +R N + N+ VE Sbjct: 179 PDPDEKEELVIGTYLPREISIHNEVSCTFIKALRDVEADLRSYSNNPLINLLKGKEKTVE 238 Query: 181 VTARQ-----LDFLARELSSHPQNLS-DGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 +T + +D L ++SS + + I + + + Y M Sbjct: 239 ITKQDEIITSIDNLNEKISSLDEIIEIKNGIDKSIK--NAVGTTYAPSIDIKSELPNKME 296 Query: 235 RRASNEQRS-WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 + + + D + +I L L + T R+ LLIE Sbjct: 297 KLFQSLKLWVGDPEDDYKGRVWELSLGGANLIYLSLKLLEYERVKTDRIAN----FLLIE 352 Query: 294 DPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 +PE +H + ++ L+ Q I +T+S + S + + V + R + ++ Sbjct: 353 EPEAHIHTHIQKTLFNNLSKSNTQIIISTHSTHISSASKISSVNVICRGKNEALVFQ-PS 411 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVI 412 + L RR+ ++ R + LFA+ +LVEG+ E +I + G D G+ +I Sbjct: 412 NNLLPNQIRRLERYLDAVRSNLLFAKGVILVEGDAEQILIPAMFEVVFGLSLDEIGVSLI 471 Query: 413 EFAQSGLKPLVKFARRMGIE--WHVLVDGDEAGKKYAAT-VRSLLNNDREAEREHLTALP 469 +G + + I+ +L D D + K + N + Sbjct: 472 NIGSTGFENVANIFHEERIKKYCAILTDQDISVVKLPDSPENDTPNQKHFRASQKSGEER 531 Query: 470 ALDMEHFMYRQGFSDVFHRMAQIPENVPMNL 500 + + + + F+ ++ MN Sbjct: 532 RVIITELCKDNEYLEAFYATHTFEVDLLMNE 562 >UniRef50_C2TVV6 Putative uncharacterized protein n=1 Tax=Bacillus cereus Rock1-3 RepID=C2TVV6_BACCE Length = 697 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 103/593 (17%), Positives = 200/593 (33%), Gaps = 68/593 (11%) Query: 1 MILERVEIVGFRGINR-------LSLMLEQN-NVLIGENAWGKSSLLDALTLLLSP-ESD 51 M L+ ++I FR L L +N N+LIGEN GKS+++DA+ L S+ Sbjct: 1 MFLKEIKIWNFRKFGEGEANSPGLQLEFHKNFNLLIGENDSGKSAIIDAIHFTLGTVSSE 60 Query: 52 LYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 DF+ + E + I T + + + Sbjct: 61 NLKITEGDFYVDEQGNSSSEMKIECIFTDLTETEA-GIFLEWLSFNEV------NEYELI 113 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG 171 RL + ++ V K G + A+ L++ + LRDA+ +R G Sbjct: 114 IRLTAKKIKNEIVGEKIEKFVKAGPANADVRLEGSAKELIKATYLKPLRDAK--NELRPG 171 Query: 172 TVPNVPNV----------EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFS 221 + + + +L+ + E + + I ++ + +Y Sbjct: 172 FKSRLAQILKSYSAFKTPSEGSHELENIVGETNQQIEGYFTKPIED--KTIIGEISNYLD 229 Query: 222 EQGAGQARYRLMRRR--ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 E + + + L ++ +D + LL + A LL Sbjct: 230 EFFNLPTTGKETYKPKFEVAPAKLSDILKKLSLDLDDQVSGLGSLNLLFIAAELLLLNDG 289 Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTP 332 + + + L LIE+ E LHP L Q I +T+S L + T Sbjct: 290 IEMGSN---LTLIEEIEAHLHPQAQLRLIKYLQKSLEGSSEYKGQFILSTHSTTLTASTS 346 Query: 333 VEHVCRLVRESSRVAAWRLGPSG--LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 +EH+ + A+ +GPS L ED + + + + FA+ + VEG+ E Sbjct: 347 LEHIILIHDN----KAYPMGPSNTSLEEEDYEFLQRFLDATKANLFFAKGVIFVEGDAEN 402 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR-----------MGIEWHVLVDG 439 ++ LA G+ ++ + K K R + + ++ D Sbjct: 403 LLLPALAELIDRPLHRYGVSIVNIGNTAFKRYAKIFSRSKKWINDGYSTLKMPVSIITDV 462 Query: 440 DEA------GKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP 493 D K+ + V+S + L + +E + + F M ++ Sbjct: 463 DVRPVEFYKDKEKSKNVKSDKKVLIIVDEFDLRKIVGEKIESNDFNELIGQTFTSMTKLK 522 Query: 494 ---ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 E + L K + S D+ ++ M+ + + +++ + V Sbjct: 523 GEMERYSITLGKEQESMLKESLSKDINQDIVMKLRENKKSHIESDFEELEANV 575 >UniRef50_B2PZ40 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PZ40_PROST Length = 649 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 89/479 (18%), Positives = 171/479 (35%), Gaps = 43/479 (8%) Query: 1 MILERVEIVGFRGINR--LSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +ER+ + FR S+ ++ N L+G N GK+ L+ AL + ++ R Sbjct: 1 MHIERINLQNFRSFGPGGQSIAVDPNLTTLVGANGAGKTVLMQALQRMFGISNEQRTIRR 60 Query: 58 DDFWFPPGDIN---GREHHLHIILTFRESLPGRHRVRRYRP--LEACWTPCTDGYHRIFY 112 DF P D R L I+ F E P G + Sbjct: 61 QDFHIPSLDEEIPCKRTLMLEAIVAFPELDD-EDGDHSVIPDFFHHMSVTDEGGKLKCRL 119 Query: 113 RLEGESAEDGSV----MTLRSFLDKDGHPID--VEDINDQARHLVRLMPVLRLRDA--RF 164 RL+ E +DGS+ + + G P++ ++ R ++L+ V R A + Sbjct: 120 RLDAEWEDDGSIDGYITSQFRAVTTWGEPVEADFHNVRPADRSRIQLIYVPATRCAVSQV 179 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 +++ + E A EL+ + + I + + + S Sbjct: 180 SAFLKSRLWKAINWSEQVRSSFTQKATELNESFEG--ENAISTVTGKLTERWQELHSAGT 237 Query: 225 AGQARYRLMRRRASNEQRSWRYL-----DIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 ++RL+ +R R L +R +D + + + + L + Sbjct: 238 DSTPKFRLVDQRFEEFVRKVEVLLHPDESRRDRSVDELSDGQSSLFHIAMTSATLDVETE 297 Query: 280 LRLDKDAR------------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 + ++ +L +E+PE L P LS ++ L Q I +++ Sbjct: 298 ILAQPESEDFLGADLPLPSLTILALEEPENNLAPYYLSRIISQISSLVHGLRAQAILSSH 357 Query: 324 SGELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCW 381 S +L+ V RL ES+ +L E ++ I +R P FA+ Sbjct: 358 SPSILARIQPTQVRHFRLATESNTTVVRQLTLPDEENEAAKYIQQAVRA-YPELYFAKVV 416 Query: 382 LLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 +L EG +E ++ ++ G D + ++ + + + + I + L+D D Sbjct: 417 VLGEGASEEIILPAISEAMGIPIDKSFVAMVPLGGRHVNHMWRLLTDLQIPFLTLLDLD 475 >UniRef50_D1NL89 SMC domain protein n=7 Tax=Bacteria RepID=D1NL89_CLOTM Length = 696 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 91/510 (17%), Positives = 166/510 (32%), Gaps = 62/510 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + +++I FR + NV+IG N GKS+L+ AL L+ + H E DD Sbjct: 4 MYISKIQIKNFRNFKQFEAHFNNGINVIIGHNNSGKSNLIKALALIFDSNTK-KHLEIDD 62 Query: 60 F--WFPPGDINGREHHLHIILTFRESLP-----------GRHRVRRYRPLEACWTPC--T 104 F + D+ + I +T + + P EA T Sbjct: 63 FNKYISLEDLKNEPPKISIAITITQQEDENLMSDDLVTISNWLTKLEEPYEALLTYEFML 122 Query: 105 DGYHRIFYRLEGESAEDGSVMTL---RSFLDKDGHPIDVED------INDQARHLVRLMP 155 Y+ + + E + R FL + I D + ++ Sbjct: 123 PVKEHERYKKKVNNLEKEEEIWEVINRDFLRLYTYKIWGGDPINKTVADSESLQKFDFQF 182 Query: 156 VLRLRD-ARFMRRIRNGTVPNVPN--------------VEVTARQLDFLARELSSHPQNL 200 + +RD R M RN + +V + + ++ + R+ S NL Sbjct: 183 LNAIRDVERDMFTGRNTLLKSVLDFFIDYDIKSDKEKTEDEKLSEISEIKRKFSIDANNL 242 Query: 201 SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW------RYLDIINRMI 254 ++ ++L + ++ + Y S+ Q Y I + Sbjct: 243 IKSLQKRMEKGKKEILSYAYNIGASFDNSYPNFDGNISDVQLYSALSLIVEYKTGIKIPV 302 Query: 255 DRPGGRSYRVILLGLFATLLQAKGT---LRLDKDARPLLLIEDPETRLHPIMLSVAWHLL 311 G +I + L +Q L + P+L+IE+PE LHP M L Sbjct: 303 SHNGLGYNNLIFMALLLAKMQINSDGTYLGSNAKVFPILVIEEPEAHLHPSMQYQLLKFL 362 Query: 312 NL-----LPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF 366 N Q TT+S + + ++ + L + + G + + + Sbjct: 363 NTNIKQNKVRQIFVTTHSTHIAASVSLDQMLCLYKYKNDTQIAYPGKVFPYEKSKKYVQR 422 Query: 367 HIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA 426 + + LF+ +LVEG E +I AR + + VI + Sbjct: 423 FLDATKSDMLFSEKVILVEGIAEQLLIPIFARYLECPLEEKHATVINVGGRYFNHFLYLF 482 Query: 427 RRMGIEWHV------LVDGDEAGKKYAATV 450 + + L D D K+ + + Sbjct: 483 DENN-PFAIKRKVACLTDRDPERKEKSQSR 511 >UniRef50_A1VKY5 ATP-dependent endonuclease of the OLD family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VKY5_POLNA Length = 637 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 91/478 (19%), Positives = 172/478 (35%), Gaps = 58/478 (12%) Query: 1 MILERVEIVGFRGINR----------LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE 49 M L ++++ FR L L NVLIGEN GKS+++DA+ L++ Sbjct: 56 MHLSKIKLWNFRKYGDNSTFILEKPNLYLDFNSGLNVLIGENDSGKSAIIDAIRLVMKTH 115 Query: 50 S-DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHR-VRRYRPLEACWTPCTDGY 107 S D + DDF ++ L I LT + P + + E Sbjct: 116 SYDWLRIDDDDFHVG-------QNRLRIELTLADIKPEEGKNFTEFLSWEILDGITVPSL 168 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMR 166 I + S +R+ D DG + +A+ +++ + LRDA + Sbjct: 169 RLILDVKKNLLTNQVSPYEVRAGADADGRQLS-----PEAKEYLKVTYLKPLRDAKEELV 223 Query: 167 RIRNGTVPNVPNVEVTARQLDF---LARELSSHPQNLSD---------GQIRQGL-SAMV 213 +N + + + L +L++ +++ + +I ++ Sbjct: 224 ARKNSRLSQILVGHEAFKNRGTDHLLMGQLANFNESIENYFNGTDLMGVEITDQFGKSLK 283 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL 273 ++ Y + L + L++ + RPG LG L Sbjct: 284 DQIDTYVQALYEPDKKTELAVTERGQLKNLLEKLELSIQGETRPG--------LGTLNRL 335 Query: 274 LQAKGTLRLDKDARPLL---LIEDPETRLHPIMLSVAWHLLNL-LPLQRIATTNSGELLS 329 A L L+K+ + L+E+ E LHP A +Q I TT+S + S Sbjct: 336 FMASELLHLNKNNWTGIRLGLVEELEAHLHPQAQMQAIETFQKHDEVQLILTTHSPNIGS 395 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 ++++ + + + L+T+D + + + + F++ +LVEG E Sbjct: 396 KLELKNLI--ICSGGNAFSMNAENTELNTDDYVFLQRFLDVTKANLFFSKGTILVEGWAE 453 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGI-----EWHVLVDGDEA 442 ++ E A+ + +G+ VI A +R I ++ D D A Sbjct: 454 ELILPEFAKLINFNLTEKGVSVINVASIAFIHYANIFKRKKIPHLILPVAIITDVDIA 511 >UniRef50_C3HBD5 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3HBD5_BACTU Length = 596 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 97/594 (16%), Positives = 199/594 (33%), Gaps = 81/594 (13%) Query: 22 EQNNVLIGENAWGKSSLLDALTLLLSPESDLY--HFERDDFWFPP-GDINGREHHLHIIL 78 E +++IGEN GKS+ L+AL L+ + + E++DFW E + +I+ Sbjct: 3 EGLSIIIGENNGGKSNFLEALNLIFNNNYSIRKRTLEQEDFWNGLVIKDTWPEIVIEVII 62 Query: 79 TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGS-------------VM 125 + + + + W T ++ Y+ + + Sbjct: 63 K---GINNEDELA----ITSRWLTRTPSEAKLTYKFRPKMGIKTVAPSKPTSISKICLPI 115 Query: 126 TLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN-VPNVEVTAR 184 ++ G ++ + + + V LRDA + +G + + + ++ + Sbjct: 116 EEYEWVIYGGEQETLDAFDFNMLNKFGVEYVGALRDATTDLKKSSGQLHRILKHYDIAEK 175 Query: 185 QLDFLARELSSHPQNLSDG-QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRS 243 L+ +A +L + + G +I +++ LE + + Sbjct: 176 DLEAIADKLDKLNEQIEKGKEINTVQTSINTYLEKITGVTKQQVKIKMGESNYDTLLKDL 235 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA-----RPLLLIEDPETR 298 + + L + LL T++ K + PLL++E+PE Sbjct: 236 KLSIGSNEDELHSVEKNGLGYNNLLYISLLLSQYTTVKEKKASKHDYLFPLLIVEEPEAH 295 Query: 299 LHPIMLSVAWHLL--NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP--- 353 LH + + Q I TT+S + S ++++ + + R+G Sbjct: 296 LHSHLQKFLADYFFKQKVIGQVIMTTHSSHVSSHGELDNLILFYKNKGNTLSKRIGTIFD 355 Query: 354 --SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAEGI 409 E R + + + + F R LLVEG E +I + + G + E I Sbjct: 356 ERKKEQREHKRYLERWLDATKSNIFFGRKVLLVEGIAERLLIPKFFQMLYEGKTLEGENI 415 Query: 410 KVIEFAQSGLKPLVKFAR--RMGIEWHVLVDGDEAGKKY-AATVRSLLNNDREAEREHLT 466 +I +P + + ++ VL D D A ++ + + + + + +E + Sbjct: 416 SIISVDGVAFRPFLHLFNPLALDMKCSVLTDSDPAKVPVLNSSNQEVKDKNGDVIKEAVY 475 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQI---------------PENVPMNLRKII------- 504 + D QG D F+ ++ I N II Sbjct: 476 PVKKEDCAVCDRTQGLIDDFNSLSNIQIFNNLKTFEYDLMLENNTGFFEELIIKHNVGTK 535 Query: 505 ---------------SKAIHRSS--KPDLAIEVAMEAGRRGVDSVPTLLKKMFS 541 KA S K D + + E G+ ++P+ +K F Sbjct: 536 ADRESIAELEGAVFAKKAYEVISNEKGDFSQLILDELNEGGILNIPSYIKCAFE 589 >UniRef50_A8RV16 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RV16_9CLOT Length = 685 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 108/564 (19%), Positives = 194/564 (34%), Gaps = 65/564 (11%) Query: 1 MILERVEIVGFR--GINRLSLM-------LEQNNVLIGENAWGKSSLLDALTLLLSPES- 50 M L V I FR G L NVLIGEN GK++++DA+ +L S Sbjct: 1 MYLSCVRIWNFRKYGYANLDATPALEVYLKGGLNVLIGENDTGKTAIIDAIKFVLGTRSH 60 Query: 51 DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRI 110 D + DF+ R L I F+E W + Sbjct: 61 DTLQIKECDFYEDL--KGERSELLKIECVFQELSDDEAGN------FLEWLTFDGDKAEL 112 Query: 111 FYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI-- 168 R+ ++ ++ + D A L+R+ + LRDA + Sbjct: 113 SVRMIARRRDN-------RIMNSITAGMPELDTRFDAIELLRVTYLKPLRDAENELKHGY 165 Query: 169 --RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 R + + + L L R Q + + ++ L ++ E+GA Sbjct: 166 HSRLAQILLNHPLFTKEKDLHVLERYFGIANQKIEEYFKKEKLEK-DEIFGIEDGEKGAK 224 Query: 227 QARYRL---MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL--------LGLFATLLQ 275 + +L +R N S Y II+ + R+ L LG L Sbjct: 225 EITGKLEATLREFMGNNYDSHGYEPIISASRNELTSILRRLSLIIAQNQVGLGSLNQLFI 284 Query: 276 AKGTLRLDKDAR-PLLLIEDPETRLHPIMLSVAWHLLNLLP--------LQRIATTNSGE 326 A L D + R + LIE+ E LHP L LQ I TT+S Sbjct: 285 ALELLLFDIENRFNIALIEEIEAHLHPQAQLRLIAYLQNKNDNDNSNKKLQCIITTHSIT 344 Query: 327 LLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 L S + ++ ++++ + L + D + + + + + FA+ + VEG Sbjct: 345 LASKIKISNLI--YCKNNKAYMLDSAHTALESGDYKYLERFLDSTKANLFFAKGVIFVEG 402 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG-----IEWHVLVDGDE 441 + E ++ +A+ G + G+ ++ +R I ++ D D Sbjct: 403 DAENILMPVIAKIIGMPLEKYGVSIVNVGSLAFLRYANIFKRKNGECIDIPIAIVTDLDV 462 Query: 442 AGKKYAATVRS-----LLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 Y + + + + E + L D+E Y + D++ ++ +N Sbjct: 463 RPDYYYEIKKEENKNIVYSIEDLKGAEEICELKCSDIEGKYYIKK-EDIYEKIK--EQNK 519 Query: 497 PMNLRKIISKAIHRSSKPDLAIEV 520 L K + +I K +++ E+ Sbjct: 520 VKKLSKKVKDSIEIYIKKEVSTEL 543 >UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNB5_EGGLE Length = 564 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 91/497 (18%), Positives = 170/497 (34%), Gaps = 64/497 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M ++++ I +R + L L L NV IG N GKS++L A+ LL P ER Sbjct: 1 MKIDKLTIKNYRSVRDLELSLSPRINVFIGANNVGKSNILSAMEYLLGPSYPTANRLERW 60 Query: 59 DFWFPPGDINGREH-------HLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 DF+ ++ + HL T+ + G R + + I Sbjct: 61 DFYQGDEELPLKIALDFDDGAHLSFDSTWHD---GYGREKHGLNYNGSYISDEVRSRYIS 117 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG 171 + + R LD + + RL + I + Sbjct: 118 ASIGPD----------RRVLDNPASS-QWSLLGRMLKEFNE-----RLSE----ETISSA 157 Query: 172 TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 V E + + + ++ +++D + + ++++ + Q Sbjct: 158 DGHTVTKAEAFKQSMQEIRDQILF---SITDQDGTNLMGELSRIMQQETANQLNCSPNDL 214 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG----LFATLLQAKGTLRLDKDAR 287 + A + ++ L I + + +G L +L+A L+L K+ Sbjct: 215 TVDLNAYDPWNLYKTLQIFVTEQETGVQMRASDMGMGVQASLTIAILRAYSKLKL-KNQT 273 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRESS 344 PL I++PE LHP + ++ L Q TT+S E + L + + + + + Sbjct: 274 PLF-IDEPELYLHPQARRKFYRVIEELADSGTQIFLTTHSTEFIDLGNFDQIYLVRKNAE 332 Query: 345 R-VAAWRLGPSGLSTEDSRRISFHIRFNR------------------PSSLFARCWLLVE 385 R + P + R++ NR LFA LLVE Sbjct: 333 RGTYVRKADPQSFVDDLQNRLNIRTDANRLMLEYRNAFENTGDSQKAAEGLFASKVLLVE 392 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGK 444 GE+E+ ++ + G +D +GI ++ L + GI +L DGD Sbjct: 393 GESESLILPFCFDRIGFDYDGKGISIVRCGGKNELDRFYRLYSEFGIPCFILFDGDFQNF 452 Query: 445 KYAATVRSLLNNDREAE 461 + ++ N Sbjct: 453 QTEDQAHTIKANKSILS 469 >UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptococcus RepID=B5E5B1_STRP4 Length = 689 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 91/482 (18%), Positives = 166/482 (34%), Gaps = 40/482 (8%) Query: 1 MILERVEIVGFRGINRLSL-MLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +V I FR + L VLIG N+ GK+++L AL+ L S + + ++ D Sbjct: 1 MKLTKVIINNFRSFGESQIIELNNQTVLIGNNSSGKTTVLQALSKLFSDKQNDRIIKKSD 60 Query: 60 FWFPPGD---INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 F P G N R + I F E + E + RLE Sbjct: 61 FHLPKGSRPGENTRNLFIETIFEFDELDGTPYSQAIPSFFEHFTVSKDGAKPFLRIRLES 120 Query: 117 ESAEDGSVM----TLRSFLDKDGHPIDVED---INDQARHLVRLMPVLRLRDARFMRRIR 169 +DG+V T ++ D I ED + +R++ V R Sbjct: 121 SWEDDGTVEGSIDTQFYYISSDEDTIRDEDKHRAPRKDLDKIRVLYVPASRTPEKELGNA 180 Query: 170 NGT-----VPNVPNVEVTARQLDFLARELSSH--PQNLSDGQIRQGLSAMVQLL--EHYF 220 +G+ V ++ E ++ EL++ +N + QI + +L ++ F Sbjct: 181 SGSMLSRLVNSINWTEDEINEITDKIDELNNTFLSENGALTQINNEIQKSWELYHEDNRF 240 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 S+ + + + G + L ++L + + Sbjct: 241 SQAELIINSSEMAAALRQIALKFSPTTTEEAFTVSDLGDGLRSIFYFSLVDSILDIELEI 300 Query: 281 RLDKDARP-------------LLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 D++ P +L IE+PE + P + L Q I T++ Sbjct: 301 TKDREENPDNPRFKLIPPVLTILAIEEPENHIAPHHIGKLIKRFKQLGNNDNSQVILTSH 360 Query: 324 SGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGLST--EDSRRISFHIRFNRPSSLFARC 380 S ++ E + L + + RV + L ++S + P FA+ Sbjct: 361 SPAIVKRIDPEDLKYLRIENNDRVLQTIVSDIQLPPAIDESYKYIKGAIQAYPELYFAKL 420 Query: 381 WLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 +L EG++E ++ + G D+ I ++ + K + I L+D D Sbjct: 421 VVLGEGDSEELLLPKFFDLLGKEVDSSQISIVPLGGRHVNYFWKLLNALRIPHITLLDFD 480 Query: 441 EA 442 Sbjct: 481 NE 482 >UniRef50_B4ACT9 Possible ATP-binding nuclease n=1 Tax=Enterococcus faecalis OG1RF RepID=B4ACT9_ENTFA Length = 690 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 82/488 (16%), Positives = 178/488 (36%), Gaps = 49/488 (10%) Query: 1 MILERVEIVGFRGINRLS--LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L+++ + +R I + E +LIG N+ GK++ L AL L S + +R Sbjct: 1 MKLKKMILKNYRSIGDDEQVIDFENLTMLIGNNSVGKTAALSALNKLFSDVPNERVLKRS 60 Query: 59 DFWFP----PGDINGREHHLHIILTFRESLPGRHRVRRYRPL--EACWTPCTDGYHRIFY 112 DF P P + +E + I F E L + P E+ D ++ Sbjct: 61 DFHLPKGIQPENFKKQELVIEAIFEFDELLDDQAESSPAIPFFFESFIVEGPDSLPKLRV 120 Query: 113 RLEGESAE----DGSVMTLRSFLDKDGHPIDVEDINDQARHL----VRLMPVLRLRDARF 164 RLE + DG++ + F+ +D A +RL+ V +RD Sbjct: 121 RLEASWEDGSTVDGTIESNIYFITCPETSEVTDDNKKNASRHDLNKIRLIYVPAVRDP-- 178 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL-SDGQIRQGLSAM-VQLLEHYFSE 222 ++++N + + V + D + H + D + G++ + + + ++ Sbjct: 179 GKQLKNVSGSMIHQVMNSINWKDETRENVKEHIDKINEDFSVESGVNILKNAIQKEWYEY 238 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDII--------NRMIDRPGGRSYRVILLGLFATLL 274 Q + ++ A+ + + +++ ID G + + + ++L Sbjct: 239 QSDTRYTKADLKFNATTIDAAVKNTEVLFSPTETGREYSIDEMGDGMKSLFYMSIVDSIL 298 Query: 275 QAKGTLRLD------------KDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQR 318 + + + ++ +E+PE + P +L + L + Q Sbjct: 299 DVEAKINEEMVNGEDLSFTKEPPVLTIVAVEEPENHISPHILGKLVNKLRDISKKGNAQT 358 Query: 319 IATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGL----STEDSRRISFHIRFNRPS 374 I T++S ++ E + R + + + L + D + P Sbjct: 359 IITSHSPAIVKRMNPEEIRH-FRMNYGTLSTSIKKLTLPDNETNSDQYKYVKEAVKAYPE 417 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWH 434 FA+ + EG++E ++ + G D+ G+ ++ + + +GI + Sbjct: 418 IYFAKLVIFGEGDSEEILLPKFFEADGSGLDSSGVSIVPLGGRHVNHFWRLVADLGIPYI 477 Query: 435 VLVDGDEA 442 L+D D Sbjct: 478 TLLDLDRE 485 >UniRef50_Q73M88 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73M88_TREDE Length = 596 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 99/511 (19%), Positives = 173/511 (33%), Gaps = 77/511 (15%) Query: 1 MILERVEIVGFR--GINRLSLMLEQN--------NVLIGENAWGKSSLLDALTLLLSPES 50 M L +++ FR G N + + NVL+GEN GK++++DA+ L+L +S Sbjct: 1 MYLSEIKLWNFRKYGRNDFDINVPHLVVPFHQGMNVLVGENDSGKTAIIDAVKLVLKTQS 60 Query: 51 -DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + DDF+ L I L F + + C+ + Sbjct: 61 YEWLRVTDDDFY-------NESDRLRIELLFEDLTDDEAKNFIEW---LCYKKQGNQPAV 110 Query: 110 IFYRL--EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR 167 I+ R+ E +T +G + + AR +++ + LRDA Sbjct: 111 IYLRVVFEARRNPKTKKITTTDIRAGEGSALYLLTSE--AREYLKVTYLKPLRDAE--NE 166 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFS------ 221 + G + N+ LA E+ + + L ++++FS Sbjct: 167 LMPGKYSRLSNI--------LLAHEVFTKEETHE--NFINHLQEFNLFVDNFFSGNDEMQ 216 Query: 222 ----------EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFA 271 EQ + + S L I + + + LG Sbjct: 217 ISDTEGAAIKEQLDEYLQSFCFNDEKARFSMSETTLKSILGKL-QLSLEKTQNPGLGTLN 275 Query: 272 TLLQAKGTLRLDK---DARPLLLIEDPETRLHPIMLSVAWHLLNLL-PLQRIATTNSGEL 327 L A L L + D L LIED E LHP L L +Q I TT+S L Sbjct: 276 RLYMAAELLNLQRKNWDGVKLGLIEDLEAHLHPQAQLKVIEKLQRLKDVQLILTTHSPNL 335 Query: 328 LSLTPVEHVCRLVRESSRVAAWRLGP--SGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 S ++++ + + +G + LS ++ + + + + FA+ + VE Sbjct: 336 ASKINLKNIILCANNT----CYPMGHEFTKLSDDNYCFLQTFLDVTKANLFFAKGLIFVE 391 Query: 386 GETETWVINELARQC------GHHFDAEGIKVIEFAQSGLKPLVKFARRMG------IEW 433 G +E + A+ G+ +I G +R I Sbjct: 392 GWSEQVFLPSFAKLLKKLGMIKKDITQAGVSIINIQSIGFFNYTHIFQRKNNNESIPIPI 451 Query: 434 HVLVDGD-EAGKKYAATVRSLLNNDREAERE 463 V+ D D + +K T + D E E+ Sbjct: 452 AVITDSDVKYYEKDKDTAEIRIKTDIEIEQA 482 >UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) family protein n=2 Tax=Gammaproteobacteria RepID=B1JGZ0_YERPY Length = 682 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 104/481 (21%), Positives = 168/481 (34%), Gaps = 53/481 (11%) Query: 1 MILERVEIVGFRGINR------LSLMLEQ-NNVLIGENAWGKSSLLDALT-LLLSPESDL 52 M L+ + +R L L N+L+GEN GK+ ++DA+ +LL+ + Sbjct: 1 MYLKHISARNYRAFGDSTSTPALDWELNPGLNILVGENDAGKTCIVDAIRQVLLTTSYEN 60 Query: 53 YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 DF R + L I T + + T DG + Sbjct: 61 IRLFEQDFHIHGAI---RSNTLCIEATLCGLSTDQ-----EASVLEWLTLGEDGTCSLIL 112 Query: 113 RLEGESAEDGSVMTLR-SFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR----FMRR 167 LE + R + + G ++ R LVR + LRDA R+ Sbjct: 113 HLEARFHPPQATKRSRVETIVRTGVNGSGPEVGYAVRELVRATYLRPLRDAEAELSSGRQ 172 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLS------------DGQIRQGLSAMVQL 215 R + N+ DF ++ P L I+ + Sbjct: 173 SRLSQILGAHNLIAGQEVNDFDQTMPANIPTQLVGLMAFTQHHLGQHQVIKSVEKDINDN 232 Query: 216 LEHYFSEQGAG-QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 F+ G Q+R R+ A L ++ P R R LG L Sbjct: 233 YLSQFAFSGDAIQSRIRIAPNLALTPILEKFELSLLPGAHIDPDARCAR--GLGYNNALF 290 Query: 275 QAKGTLRL-DKDARPLLLIEDPETRLHPIMLSVAWHLLNL--------LPLQRIATTNSG 325 A + L D + LLL+E+PE LHP + LL +Q I TT+S Sbjct: 291 MATELVLLRDGEELGLLLVEEPEAHLHPQLQERVMDLLKEHSNDDQAHKRVQVIMTTHSP 350 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 L+S +E + + + ++ +G + L D + I + + FAR ++VE Sbjct: 351 SLVSTARIEDLTLVHK--AQTFPLAVGKTKLKRTDYSFLRRFIDATKANLFFARGVMMVE 408 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG------IEWHVLVDG 439 G E ++ +A CG F G+ ++ +GL + +R G I L D Sbjct: 409 GPAEAILLPAIAEMCGRSFSKHGVSLVNVGNTGLYHYARILQREGTGPDIPIPVVCLTDR 468 Query: 440 D 440 D Sbjct: 469 D 469 >UniRef50_B4EWQ2 Putative plasmid-related protein n=2 Tax=Gammaproteobacteria RepID=B4EWQ2_PROMH Length = 654 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 86/482 (17%), Positives = 169/482 (35%), Gaps = 49/482 (10%) Query: 1 MILERVEIVGFRGINR--LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +ER+ + FR S+ ++ L+G N GK+ L+ AL + ++ R Sbjct: 1 MHIERINLQNFRSFGPEGQSIAVDPDLTTLVGANGAGKTVLMQALQRMFGISNEQRTIRR 60 Query: 58 DDFWFPP---GDINGREHHLHIILTFRESLPGRHRVRRYRP--LEACWTPCTDGYHRIFY 112 DF P + R L I+ F E P G + Sbjct: 61 QDFHIPSLEEEIPSKRTLTLEAIVAFPELDD-EDGDHSVIPDFFHHMSVTDEGGKLKCRL 119 Query: 113 RLEGESAEDGSV----MTLRSFLDKDGHP--IDVEDINDQARHLVRLMPVLRLRDA--RF 164 RL+ E +DGS+ + + G P D +++ R ++L+ V R A + Sbjct: 120 RLDAEWEDDGSIDGYITSQFRAVTTWGEPEVADFQNVRPADRSRIQLIYVPATRCAVSQV 179 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQN-----LSDGQIRQGLSAMVQLLEHY 219 +++ + E A EL+ + + G++ + + Sbjct: 180 SAFLKSRLWKAINWSEQVRSSFTQKATELNESFEGEKAISIVTGKLTERWHELHSAGTDS 239 Query: 220 FSEQGAGQARYRLMRRRAS---NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 + R+ R+ + S R +R ID + + + + L Sbjct: 240 TPKFRPVDLRFEEFVRKVEVLLHPDESGR-----DRSIDELSDGQSSLFHIAMTSATLDV 294 Query: 277 KGTLRLDKDAR------------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIA 320 + + ++ +L +E+PE L P LS ++ L Q + Sbjct: 295 ETEILAQPESEDFLGADLFLPSLTILALEEPENNLAPYYLSRIISQISSLVHGLRAQAVL 354 Query: 321 TTNSGELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFA 378 +++S +L+ V RL ES+ +L E ++ I +R P FA Sbjct: 355 SSHSPSILARIQPTQVRHFRLATESNTTVVRQLTLPYEENEAAKYIQQAVRA-YPELYFA 413 Query: 379 RCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVD 438 + +L EG +E ++ ++ G D + ++ + + + + I + L+D Sbjct: 414 KVVVLGEGASEEVILPAISEAMGIPIDKSFVAMVPLGGRHVNHMWRLLTDLQIPFLTLLD 473 Query: 439 GD 440 D Sbjct: 474 LD 475 >UniRef50_A1VV80 Transcriptional regulator, Fis family n=15 Tax=Proteobacteria RepID=A1VV80_POLNA Length = 645 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 89/476 (18%), Positives = 155/476 (32%), Gaps = 39/476 (8%) Query: 1 MILERVEIVGFRGINRLS--LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L R+ I F+ + + E L+G N GK+ +L AL L + L R Sbjct: 1 MKLTRLRISNFQSFGPVPTPIDFEAMTFLLGPNGAGKTVVLQALARLFGFDPSLRRVRRS 60 Query: 59 DFWFPP-----GDINGREHHLHIILTFRESLPGRHRVRRYR-PLEACWTPCTDGYHRIFY 112 DF P G+ + F E L + DG R+ + Sbjct: 61 DFHISPATLAAGNAGTLNLWIEAQFEFPELLDANGQHATIPGHFSHMQLDSADGVPRVRF 120 Query: 113 RLEGESAEDGSVMTLRSFL---DKDGHPIDVEDINDQARHLVRLMPVLRLRD-------- 161 RL EDG + ++ D + P++ + R+ +++ + RD Sbjct: 121 RLTAILDEDGDIEEKMHYVIHVDANDEPVNPMVVPKHDRNSIQVHYLPARRDPTDHISYT 180 Query: 162 -----ARFMRRIR--------NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQG 208 R +R G + + + + +++ H L G Sbjct: 181 ASSLLGRTLRAANWHAERATVAGLTQGISAALASNAGVQGIGEQMAGHWLKLHKGSYYAS 240 Query: 209 LSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG 268 S EH + ++ R D ++ S + I Sbjct: 241 PSV---SFEHNEIDNLLRHLTIGFTPGHEASMVDFSRLSDGQQSLLYVSLVLSIQGIGRR 297 Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNS 324 + A L A RL L+ +E+PE L P L L Q + T++ Sbjct: 298 VLAGQLDAFDIDRLRPAVFTLMAMEEPENSLSPHYLGRVIKALTDFAGHHDAQAVVATHA 357 Query: 325 GELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 LL P E + L +++R + T+++ + P F+R +L Sbjct: 358 PSLLRRVPPESIRYLRLDAARCTTVKTIVMPAKTDEAHKFVREAVQAFPELYFSRLVILG 417 Query: 385 EGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 EG++E V+ L R G D I + + + + I + L+D D Sbjct: 418 EGDSEEIVLPRLFRAMGLADDDTSIVIAPLGGRHVNHFWRLLSGLQIPYVTLLDLD 473 >UniRef50_B5XVI7 OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XVI7_KLEP3 Length = 583 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 116/606 (19%), Positives = 198/606 (32%), Gaps = 95/606 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++I FR + +++ L VL+GEN GKS+++DA+ LL P S +D Sbjct: 1 MYLGSLKISRFRSCDDVTVSLRPDLTVLVGENNGGKSNVVDAIRLLTLPLSGRRERYPED 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF---YRLEG 116 + R + +F+ + + L P + Y Sbjct: 61 ------EDVRRY---STVPSFQIEGAFQGLSDTLKGLLISAVPDPTKSEATYGYRYESRS 111 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV--P 174 E A G D +G + L+R + + LRDA + +GT Sbjct: 112 EHAPRGKTTVWAGRFDTNGPELGSS-------ELIRHVYLPPLRDAHQVLGTSSGTRVMA 164 Query: 175 NVPNVEVTARQLDFLA--RELSSHPQNLSD--GQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + N R+ DFLA R + P+ L+ I L + + + G Sbjct: 165 LLRNFLPKEREQDFLAGVRRADNRPEILTTINTDISAALGLLTNGVRPQIAALDFGSE-- 222 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 + A + + +I I G ++ + L L + Sbjct: 223 -TLLDVARDLRFRMADTGLIPEDIRSSGLGYSNLLYMATVVVELTKAKEADL-----TIF 276 Query: 291 LIEDPETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVE 334 L+E+PE LHP + + L +Q + TT+S L + Sbjct: 277 LVEEPEAHLHPQLQVLVLEFLLDQARQSASRIVEPGKPEGRIQIVVTTHSPNLTAWVSPR 336 Query: 335 HVCRLVRES--------SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 H+ + S + + GL + +IS ++ R + LF +LVEG Sbjct: 337 HLVVMRSRHREQDGIAISESVSVPIAEIGLKPKTLDKISRYLDVTRSALLFGNRAILVEG 396 Query: 387 ETETWVINELARQ--CGHHFDA----EGIKVIEFAQSGLKPLV----------KFARRMG 430 E ++ LA++ D +G ++ +P V + A R+ Sbjct: 397 IAEALLLPVLAQKLVLADDLDGWLRFKGAVIVPIEGVDFRPYVEVLLRPYGDARIADRL- 455 Query: 431 IEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQG----FSDVF 486 V+ D D L A + +EH ++ G VF Sbjct: 456 ---IVITDADPTVLGNRKVDLENLAATHGASDALIVLTNQHTLEHEIFGAGNESFLKSVF 512 Query: 487 HRMAQ------------IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPT 534 R+ + IPE N + +A ++ K DLA +A VP Sbjct: 513 LRLHRNSRRDWEAQIEGIPEQDRPNAFLKLIEA-KKTRKGDLAQAMASRIEAGEPFVVPP 571 Query: 535 LLKKMF 540 L Sbjct: 572 YLIDAI 577 >UniRef50_B9MK40 Putative uncharacterized protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MK40_ANATD Length = 685 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 85/479 (17%), Positives = 169/479 (35%), Gaps = 42/479 (8%) Query: 1 MILERVEIVGFRGI--NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M +++++I FR + ++ LIG N+ GK+++L AL + ++ +R Sbjct: 1 MYIDKIKIRNFRCFGPEETVIEFDKLTALIGANSCGKTAVLHALMKIFGSDNK--EIKRS 58 Query: 59 DFWFP----PGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG---YHRIF 111 DF P P +I + ++ + L+F E + G Y RI Sbjct: 59 DFHVPKSMDPQEIENNDLYIEVKLSFPELRQENTELNSIPSFWNYMVIREPGVLPYVRIC 118 Query: 112 YRLEG--ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARH---LVRLMPVLRLRD-ARFM 165 + + DG + T F+ D R + + V +RD + + Sbjct: 119 LKSSWQKSNTPDGDIETEILFIKAPEGREKDSDYEKAKREHLSRILFVYVPAIRDVSPQL 178 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGL--SAMVQLLEHYFSEQ 223 R + N + + N RE + L L + + Y + Sbjct: 179 RNVSNSILWKILNSIEWEEDFKSKIREKTEEIDKLFAKNPGVSLVKEIISNTWKKYHRDY 238 Query: 224 GAGQARYRLMRRRASN-----EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ--- 275 +A R R E + + + ++ G + L L +LL+ Sbjct: 239 RYKEAHMRFSRGDLDTVLKKVEIEFYPTSEPKSYTVNELGDGLRSLFYLTLVNSLLEFEN 298 Query: 276 --------AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 +K + LL IE+PE + P +L L + Q I T++ Sbjct: 299 RILQSKHSSKSPFNKEPSTLVLLAIEEPENHVCPHLLGRIMDNLKDISSKQNAQVILTSH 358 Query: 324 SGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST--EDSRRISFHIRFNRPSSLFARCW 381 S ++S + L ++ ++ L +++ + P F+R Sbjct: 359 SASIISRIEPTEIRHLRIKNED-LCTKVSRIILPEQIDEAFKYVKEAVKAYPEIYFSRLV 417 Query: 382 LLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 +L EG++E +I ++ + G D+ I ++ + + + +GI + L+D D Sbjct: 418 ILGEGDSEELIIKKMIEKSGLSADSCAISIVPLGGRFVNHFWRLLQDIGINYITLLDMD 476 >UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRV7_9ACTO Length = 531 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 93/542 (17%), Positives = 179/542 (33%), Gaps = 54/542 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESD--LYHFERD 58 M + + I + L + N +L+G N GKSSL+ L LLL Y Sbjct: 1 MKISSITIKNHSRLPDCVLDVRNNLILVGPNGSGKSSLIRCLDLLLGKSMQQLYYSISNS 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF E L I ++ E + P + E+ Sbjct: 61 DFRDA-------EQPLFI----------EAKLTNLNSDELSFFPDEVDVQDNSLTIRLEA 103 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 +G +T+ F + + + + + R V + Sbjct: 104 NLNGEDLTISRFFPYGVGNAPLSSAQLKITGWNMVPSDF---STKTLAPGRRNIVDDYLK 160 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 + L + + ++D LS++ L + + Sbjct: 161 EIDASGDQVKLGEAIDALGSAINDSNAFTGALSSLASKLNPALEGGVTTENLRFVPGAAI 220 Query: 238 SNEQRSWRYLDIIN-----RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 S L++ + R + + +I +F + ++ ++ I Sbjct: 221 EGNLLSDVRLEMKDKSGSMREVTEQSDGTKALISFAIFGLI-----------NSNGIIAI 269 Query: 293 EDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG 352 ++PET LHP +L Q I T+SG + S +++ + RES A + G Sbjct: 270 DEPETHLHPSAQRNLMQVLQSSDRQLIIATHSGVVASEFSPDNIAAM-RESMPPAQPKSG 328 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVI 412 ED + ++ +R L AR + VEG+++ V+ +A G+H +GI+++ Sbjct: 329 FLE-GQEDQKMLARWWISSRIELLTARNIIAVEGQSDRMVVERVAELVGNHLKRDGIEIL 387 Query: 413 EFAQSGLKPLVK---FARRMGIEWHVLVDGDEAGKKYAA--------TVRSLLNNDREAE 461 E P V A G + +L+D D K +A +S+ + + E Sbjct: 388 EAGSCNEMPYVMDIFGANGFGKQVSILIDEDAENKTASALSIALKDLASKSVFVSRVDLE 447 Query: 462 REHLTALPALDM-EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 E++ A+ + + E F + +I + R + +A + Sbjct: 448 DEYVAAIGSSSLWEALGKSNLFPPNRLKCCRIARGASL-PSATELATFCRRKRNKIACAI 506 Query: 521 AM 522 Sbjct: 507 VA 508 >UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXK2_9SPHI Length = 631 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 83/498 (16%), Positives = 166/498 (33%), Gaps = 63/498 (12%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLL--LSPESDLYHFER 57 M L +V I F+GI + + N++IGEN K++L+DA+ LL + Y+ Sbjct: 1 MYLSKVHIQNFKGIKSQEFSFDSKLNIIIGENGSHKTALIDAIRLLYNMGNPKKDYYISN 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF--YRLE 115 DDF F + + + I F G + E T Y +I Y L Sbjct: 61 DDFHFDKT-TSAQATKIEIRYIF----DGLSSSEKGALYEYLVIEPTIEYAQITLIYELR 115 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF---------MR 166 + S T S + + + + + LRD+ + Sbjct: 116 ANNYPKFSYFTGAS---------AEQKADSGTFEIFQHYYLGALRDSTNDLLNTKTNMLG 166 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLL--EHYFSEQ 223 + V + + + EL + L+ + + L + ++ Sbjct: 167 SVIKRIVERAKTEDEFKKIIQTANTELLKRDEVLNTRTGVNEHLDDIFKISKDNQIGMRI 226 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 ++ LD + + +I + + ++ + + Sbjct: 227 EESSKIESILNVIKPYLPHDKTKLDNDGFNLWQNSLGFNNLIYIAIILGDIKQRTVD--N 284 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELLSLTPVEHVCRL 339 + +LLIE+PE LHP + + L Q T++S L S ++++ + Sbjct: 285 PNQHFVLLIEEPEAHLHPQLQLNLYDFLKTAGSPNNCQLFITSHSPTLTSKANLDNLILV 344 Query: 340 V------------RESSRVAAWRLGPSGLSTED----SRRISFHIRFNRPSSLFARCWLL 383 RES + L+ ED +++ ++ + FAR L Sbjct: 345 SQNAINIGGCYEDRESENIIEISTKKITLTDEDFSSRKKQLERYLDVTKSQLFFARGILF 404 Query: 384 VEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEWHVLV 437 VEG +E ++ +R + + +++ P + R+ + ++ Sbjct: 405 VEGISEKLLLKTFSRILKSNLEDYRCEIVNIEGVSFYPFIHLFNSKDSSKRISQKASIIT 464 Query: 438 DGDEAGKKYAATVRSLLN 455 D D +Y+ S N Sbjct: 465 DDD----RYSKAKNSFKN 478 >UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropheryma whipplei RepID=Q83GY6_TROWT Length = 545 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 94/488 (19%), Positives = 177/488 (36%), Gaps = 53/488 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L++V I + I+ ++L + ++ VL+G N GK+S+L L LLLS + F Sbjct: 23 MQLKQVTITNYTPISDITLEVRRHLVLVGANDSGKTSILTCLDLLLSATT---PMLYSHF 79 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + + + + ++ + + I L E Sbjct: 80 QAWHFRDATKPIIISVDINNLDD-----------KIQIAFGINNNRISEIKLTLSAFLDE 128 Query: 121 DGSVMTLRSFL-DKDGHPIDVEDINDQARHLVRLMPVLRLRD-----ARFMRRIRNGTVP 174 + R L + P+ + L V + N Sbjct: 129 SQMLTIKREVLYNNTTKPVADSQLTGIGWELFDAGEVPCTASQYKTVLSGVMESTNLRQH 188 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 + ++ + R+ + L + + L++ I+ + + H + G +R Sbjct: 189 GLSSLTQSFREQIEASPFLENLRERLAEKLIKTMPGNLNKDAVHLVPKDDIGTQVLGNIR 248 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 + + +S +D ++ M + + ++ L +DA ++ I++ Sbjct: 249 VQVKRQNKSPHMIDCLDGM--------RSLYAVAIYDVL---------SRDAS-VVGIDE 290 Query: 295 PETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 PET LHP + +L Q+I T+S +++ EHV + V R Sbjct: 291 PETHLHPTIQRSLARVLQEESNQKIIATHSADIVGAFSPEHVAVVQPNGQVVQPAR---- 346 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF 414 G ED R I+ R L AR + VEG ++ ++ A G + D GI +IE Sbjct: 347 GFLGEDERIIARWWVHGRLEPLTARRIVAVEGISDRIILESAAEVTGRNLDRLGIALIEA 406 Query: 415 AQSG-LKPLVKFA--RRMGIEWHVLVDGDEAG--------KKYAATVRSLLNNDREAERE 463 SG + P+ K + I +L+D D K T S+ + R+ E E Sbjct: 407 NGSGDMWPIYKLFGPKGFRIPISLLIDSDAVQHTSVRLGIPKNEFTQNSIYVSKRDLEDE 466 Query: 464 HLTALPAL 471 + A+ A Sbjct: 467 YTRAIGAN 474 >UniRef50_D1PF96 Putative uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PF96_9BACT Length = 585 Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 86/479 (17%), Positives = 165/479 (34%), Gaps = 67/479 (13%) Query: 1 MILERVEIVGFR--GINRLSLMLEQNNV--------LIGENAWGKSSLLDALTLLLSPES 50 M + +++ FR G + L V LIGEN GK++++DA+ +L + Sbjct: 1 MYISELKLWNFRKYGADDFDLTNPHLTVPFKSGMNVLIGENDSGKTAIIDAIKYVLKTNA 60 Query: 51 -DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + +DDF+ + HL I L + + P +G Sbjct: 61 YESIRILQDDFYND-------KDHLRIELLIDDVTDDEA-----KNFTEISAPKENGGMA 108 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRI 168 + +DG + +++ + G D + + +R+ + LRDA + Sbjct: 109 SIKLVLDVVRKDGHI---QAYEVRGGFDADGHSLTPLMKDNLRITYLKPLRDAENELTAK 165 Query: 169 RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE-QGAGQ 227 +N + + EL N + + + +E++F + G Sbjct: 166 KNSRLSQILQSH-----------ELLKQNSNGEKHDLIKIIEEANAKIENWFDDDTGGET 214 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSY------------RVILLGLFATLLQ 275 + R ++ + + D ++ + + + LG L Sbjct: 215 SHKRQIKGVIDQFVKLFISDDAESQFLLADPTMKNILERLAISVVNSKNLGLGTLNRLFM 274 Query: 276 AKGTLRLDKDARPL--LLIEDPETRLHPIMLSVAWHLLN-LLPLQRIATTNSGELLSLTP 332 A L L K L LIE+ E +HP L +Q I TT+S + S Sbjct: 275 ATELLHLKKKGDNLKVCLIEELEAHIHPQAQMKVISALQQEESVQFILTTHSPNITSKVK 334 Query: 333 V------EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 + + L+ S V G + L +D + + + + + FA+ +LVEG Sbjct: 335 LGKDTDVNSI--LMCNSDNVFPMGAGYTKLEKKDYKFLDTFLDVTKSNLFFAKGVILVEG 392 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR-----MGIEWHVLVDGD 440 E +I +A + G I V+ + + R M ++ ++ D D Sbjct: 393 WAEEILIPVIASKMGFDLTQHEISVVNVGSTAYLHFARVFMRRSEPEMKVKCAIVTDLD 451 >UniRef50_Q5WI68 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q5WI68_BACSK Length = 670 Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 87/475 (18%), Positives = 172/475 (36%), Gaps = 34/475 (7%) Query: 1 MILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 MI+ ++ + FR ++ L + + +GEN+ GK++L+ L L S E+ Sbjct: 1 MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKS 60 Query: 59 DFWFP----PGDINGREHHLHIILTFRESLPG--RHRVRRYRP--LEACWTPCTDGYHRI 110 DF P I + + + F E L + R P + + Sbjct: 61 DFHIPKQAKVETIKELQLSIEARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYL 120 Query: 111 FYRLEGESAED----GSVMTLRSFL----DKDGHPIDVEDINDQARHLVRLMPVLRLRDA 162 RL + D G + F+ D D D+ + R ++++ V +R+ Sbjct: 121 RVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVPVTPHQRSSIQVLYVPAVREP 180 Query: 163 RFMRRIRNGT-----VPNVPNVEVTARQLDFLAR---ELSSHPQNLSDGQIRQGLSAMVQ 214 R +GT + N+ + + EL + +S + G Sbjct: 181 SSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY 240 Query: 215 LLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 + + + + L E D+ +++ G + L L ++LL Sbjct: 241 HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLL 300 Query: 275 QAKGTLRLDKDAR-PLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELLS 329 +A+ + +A +L +E+PE + P +L L + Q + T++S ++ Sbjct: 301 EAEIKITGKSNASLTVLAVEEPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIK 360 Query: 330 LTPVEHVCRLV--RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 +++ L + S ++ ++E I +R P F+R +L EG+ Sbjct: 361 RIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEAVRA-FPEIYFSRLVILGEGD 419 Query: 388 TETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 +E VI + G H D GI ++ + + K + I L+D D Sbjct: 420 SEEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRE 474 >UniRef50_C7X4G8 SMC domain-containing protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4G8_9PORP Length = 693 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 88/575 (15%), Positives = 165/575 (28%), Gaps = 78/575 (13%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ ++I FR S+ E NV+IG N GKS+LL A+ L+L D Sbjct: 13 MYIKEIKISNFRNFRDASVPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYSDGRRLGTCDL 72 Query: 60 FWFPPGDINGREHH-LHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEGE 117 F+ ++ + I L F S T P ++ Y + Sbjct: 73 FYETDVVTLQQQSPRIKITLIFHRSQGEALDSAEMGLFSGMMTDPALSEEAKLRYEFKLA 132 Query: 118 SAEDGSVM----------TLRSFLDKDGHPI-DVEDINDQARHLVRLMPVLRLRDARFMR 166 ++ + + +D+D + + + L D +F+ Sbjct: 133 DDQEDNYKADVAGVTTAKEIWKIIDRDYIRLYRSSRSGGNQAAGISVNDALGQMDFQFLD 192 Query: 167 RIRNGTVPNVPNVEVTARQ-LDFLARELSSHPQNLSDGQIRQGLSA------------MV 213 IR+ + R L+F + ++ +I++ L A M Sbjct: 193 AIRDVSHDLYAGYNPLLRDVLNFFIDYSVKNDATKTEDEIKEQLKALRNDFVQQSSPLMQ 252 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID-----------------R 256 L + + + + + N M Sbjct: 253 TLQDRLHNGKNVFLKYALDTGATFNGAVPDFDGEVTENEMFAVLRMIIKYTVGIEVPATY 312 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDK---DARPLLLIEDPETRLHPIMLSVAWHLLNL 313 G +I + L +QA ++ K L +E+ E LHP M L Sbjct: 313 NGLGYNNLIYMSLLLAKMQADSSITYMKRNAKVISFLAVEECEAHLHPAMQYKFLQFLQD 372 Query: 314 LPL-----QRIATTNSGELLSLTPVEHVCRLVR------ESSRVAAWRLGPSGLSTEDSR 362 Q T++S ++ S ++ + L + + Sbjct: 373 NKANGHVRQIFMTSHSTQIASAVKLDDLICLTSPVLGQINVGYPRVIYKEDNDDDVVSKQ 432 Query: 363 RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL 422 + I + FA + VEG E ++ AR + E + V+ Sbjct: 433 YVQRFIDATKADMFFANKLIFVEGVAEELLLPVFARYLNKNLTDEHVLVVNMGGRYFNHF 492 Query: 423 VKFAR-----RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALP---ALDME 474 +K + + L D D KK E + ++ P +D Sbjct: 493 LKLFDTNNPYTINKKIVCLTDIDPCRKKN------------EPDEDYEACYPYEYNIDTA 540 Query: 475 HFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIH 509 ++ Y+ + A P K + Sbjct: 541 NYNYKHHADTEVAQYAAHPNIRFYRQDVTYGKTLE 575 >UniRef50_C2MCD2 RecF/RecN/SMC N domain protein n=2 Tax=Bacteroidales RepID=C2MCD2_9PORP Length = 680 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 92/512 (17%), Positives = 157/512 (30%), Gaps = 66/512 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ ++I+ FR + E NV+IG N GKS+LL A+ L+L D Sbjct: 1 MYIKEIKILNFRNFKEALIPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYNYGHRLGVSDL 60 Query: 60 FW-FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT--DGYHRIFYRLEG 116 F+ + + + I L R S G L + + Y + Sbjct: 61 FYETDLAVLQQQSPRIQITLLLRRSA-GEALDSAEMGLFSNMMTDPELSEEAELRYEFKL 119 Query: 117 ESAE---------------------DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP 155 AE D + L G+ IN+ + Sbjct: 120 TDAEEDNYKSDVANATTAKEIWKIIDHDYIRLYRTSRLGGNQAAGISINETLMQ-IDFQF 178 Query: 156 VLRLRD-ARFMRRIRNGTVPNVPNVEVT---ARQLDFLARELSSHPQNLSDG-------- 203 + +RD + + N + +V N + E+ + L DG Sbjct: 179 LDAIRDVSHDLYAGYNPLLRDVLNFFIDYSVKNDSTKTEDEIKGQLKTLRDGFVQQSSPL 238 Query: 204 --QIRQGLSAMVQLLEHYFSEQGAGQ--ARYRLMRRRASNEQRS-----WRYLDIINRMI 254 ++ L + Y + GA A NE + +Y D I Sbjct: 239 MQTLQDRLQNGKNVFLKYALDTGATFNGAVPDFDGTVTENEMFAVLRMIIKYADGIEVPA 298 Query: 255 DRPGGRSYRVILLGLFATLLQAKGTLRLDK---DARPLLLIEDPETRLHPIMLSVAWHLL 311 G +I + L +QA ++ K L +E+ E LHP M L Sbjct: 299 TYNGLGYNNLIYMSLLLARMQADSSITYMKRNAKILSFLAVEECEAHLHPAMQYKFLQFL 358 Query: 312 NLLPL-----QRIATTNSGELLSLTPVEHVCRLVR--ESSRVAAWRLGPSGLSTED---S 361 Q T++S ++ S ++ + L + +D Sbjct: 359 QDNNANGHVRQIFITSHSTQIASAVKLDDLICLTSPALGQINVGYPRDIYKEDNDDVESK 418 Query: 362 RRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP 421 R + + + FA + VEG E ++ AR + E + VI K Sbjct: 419 RYVQRFLDATKADMFFANKLIFVEGIAEELLLPVFARYLDKNLTDEHVLVINMGGRYFKH 478 Query: 422 LVKFAR-----RMGIEWHVLVDGDEAGKKYAA 448 +K + + L D D KK+ + Sbjct: 479 FLKLFDTNNPHTINKKIVCLTDIDPCRKKHGS 510 >UniRef50_C1EJU5 RecF/RecN/SMC N domain protein n=2 Tax=Bacilli RepID=C1EJU5_BACC3 Length = 688 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 93/549 (16%), Positives = 169/549 (30%), Gaps = 81/549 (14%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNN-VLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + R+ + FR N ++ + V++G N GK++++ AL LL D Sbjct: 1 MYISRLTLKNFRTFKNETTVQFHEGTNVIVGHNNAGKTTIIKALELLFDANKSKR-LSID 59 Query: 59 DFW--FPPGDINGREHHLHIILTFRESLPGR-----------HRVRRYRPLEACWTPC-- 103 DF + + I T ES + +P EA T Sbjct: 60 DFNKNTTCDQLKESAPKITISATLVESEKEEIYSDDLVTVSTWLTKLEKPYEAKLTYEFF 119 Query: 104 -TDGYHRIFY----RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPV-- 156 + +Y ++EG + D ++L K H I V +I + ++L+ + Sbjct: 120 LPEKELEDYYNDIRKIEGTNINDYWNEIKNNYLRKYVHKIYVGNIEN--KNLIDTDSINK 177 Query: 157 ------LRLRD-ARFMRRIRNGTVPNVPN--VEVTARQLDFLARELSSHPQNLSDGQIRQ 207 +RD R + N + V + ++ + + E + Sbjct: 178 FAFQFLTAIRDVERDLFTGSNTLLKEVIDFFIDYEIKTDISITDEEKKIKIREKKELFSK 237 Query: 208 GLSAMVQLLE-----------HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR 256 G +++Q L+ Y GA + + + + L +I Sbjct: 238 GAQSLIQSLQDRMREGKKHMLQYVENTGAAFDKMQPSFEGGILDTELYSALKLIVENETG 297 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDKDARP-----------LLLIEDPETRLHPIMLS 305 + LG + + ++ KDA +L IE+PE LHP M Sbjct: 298 IKLPAVNN-GLGYNNLIYISLLLAKMQKDASGEYLGTNAKVYSILAIEEPEAHLHPNMQY 356 Query: 306 VAWHLLNLLP----LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR----LGPSGLS 357 L Q T++S + + ++ + L + S Sbjct: 357 KFLKFLKQNRETEVRQIFITSHSPSITAAVDLDDIIVLYKNKEETKVAYPGKVFNESPDD 416 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 + + + I + FAR + VEG E VI E A G+ VI Sbjct: 417 IKSKKYVKRFIDVTKADIFFARNLIFVEGLAEQLVIPEFATALGYDLTDTHTSVINIGGR 476 Query: 418 GLKPLVKFA------RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 + +K + + D D K+ + A Sbjct: 477 YFEHFLKLFDTSKNPNAIEKRIACITDLDPVRKEKGRKGAKWVTCSVLALNN-------- 528 Query: 472 DMEHFMYRQ 480 D+E + Y Sbjct: 529 DIEKYDYNS 537 >UniRef50_A3VYF2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VYF2_9RHOB Length = 674 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 89/537 (16%), Positives = 168/537 (31%), Gaps = 72/537 (13%) Query: 1 MILERVEIVGFRGINRLS--LMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + + + FR + L+ IG+N GK+++L AL L S+ R Sbjct: 1 MYIRELRLKNFRCFGDHEEVISLDPEMTAFIGDNGSGKTTVLKALQRLFGSTSNERSLRR 60 Query: 58 DDFWFPPGDING----------------REHHLHIILTFRE--------SLPGRHRVRRY 93 DD F G++ G RE H+ IL F E S G Sbjct: 61 DDVHFGAGEVPGPANQGDDTEAMPVVSSREIHIEAILDFPELTDATEVRSDTGLDVSVET 120 Query: 94 RPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLR-SFLDKDGHPIDVEDINDQA----- 147 +C P T RI E D + R ++ ED + Sbjct: 121 FHAMSCAGPGTPLQARIRLEANWEYGIDEDDIVQRIYWVTTTEEVPFGEDDIAKIPMSTA 180 Query: 148 -RHLVRLMPVLRLR-----------DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSS 195 R ++L + R + +E+ +L + +L + Sbjct: 181 QRRRIQLKYLPATRNNSAVVKSAMKELLVWLERFGDLTSGKQQLEIQRTELQKVFDDLPA 240 Query: 196 HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM-I 254 +++ +L + + + + + + I Sbjct: 241 VNGVVNEL-----TKNWGKLFKGELYSEAKLNILATEIHKALRDLTLKLSPSESGAEYAI 295 Query: 255 DRPGGRSYRVILLGLFATLLQ-----------AKGTLRLDKDARPLLLIEDPETRLHPIM 303 + ++ + + A+++Q + K ++ +E+PE L P Sbjct: 296 EDLSEGQASLLYISIVASIIQLNERHIGKSVTGYRDVPELKPWLTIIALEEPENHLSPFY 355 Query: 304 LSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW--RLGPSGLS 357 LS L++ L I TT+S + E + + + ++ + + Sbjct: 356 LSRMIALMSSLCTGDSAMGILTTHSAGAIRRVKPEQIRYMRHDEQNRVSYSKSINLPPKT 415 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAEGIKVIEFA 415 E + I +R N P FA+ +L EG +E V+ LA+ D + + Sbjct: 416 DEKYKYIYEAVRSN-PELYFAKLVVLGEGRSEEIVVPRLAKAFHPDLDLDPAFVAFVPLG 474 Query: 416 QSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 + K + I L+D D G+ A +R D+ + + L Sbjct: 475 GRHVNHFWKLLNDLNIPHVTLLDYD-LGRYNAGCLRLKYAVDQLSSFGIMPDLEKPK 530 >UniRef50_C2FX67 SMC domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FX67_9SPHI Length = 656 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 83/485 (17%), Positives = 173/485 (35%), Gaps = 52/485 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFE--R 57 M L +++ ++GI + + N++IGEN GKS+++DA+ LL + + Sbjct: 15 MYLAYIKVENYKGIEAIETEFDPKLNIIIGENGCGKSAIIDAIRLLYNIGEPIREISVSS 74 Query: 58 DDFWFPPGDING-----REHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 DDF + +G + + I F+ + + + Sbjct: 75 DDFHQKTVENDGIKTIQKSSLITITYIFKGLSTAQKGA-----FYEYMVIDPNKIEEDYA 129 Query: 113 RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNG 171 ++ E +F G+ ID + + + L + + LRD+ + + RN Sbjct: 130 KVSISYEEKDG--KYPNFSYNTGN-IDGQKADYKTFELFQHYYLGALRDSTKDLLSTRNN 186 Query: 172 TVPNVPNVEVTARQLDFLARELSS--HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 + V V + + ++ + Q LS +++ + LE F + + Sbjct: 187 ILGKVIRRFVKREKSESEIEQIIKDANSQLLSRDEVKNTRDGVNTNLESIFKKVIDNKIG 246 Query: 230 YRLMRRRASNEQRSWR--YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 R+ + + + + + D + L + G ++ + Sbjct: 247 VRIEEAKTEYIVNAIKPYLPHDRSTLKDEGFHLWQNSLGLNNLIYIAVVLGDIKEQIEDN 306 Query: 288 PL----LLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVEHVCRL 339 L LLIE+PE+ LHP + ++ LN Q TT+S L S P++++ L Sbjct: 307 GLPHFALLIEEPESHLHPQLQLSLYNFLNNANATENSQLFITTHSPTLTSKVPLKNLILL 366 Query: 340 -------------VRESSRVAAWRLGPSGLSTED----SRRISFHIRFNRPSSLFARCWL 382 RES ++ L D +++ +I + LFA+ L Sbjct: 367 DCGKATKLDKQFQNRESEKLIEDTTKNKELLDPDLENRMKKLQRYIDVTKSQLLFAKSIL 426 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV------KFARRMGIEWHVL 436 +EG +E +I+ + + +++ + P + R+ ++ Sbjct: 427 FIEGISEELLISAFTLLEDYKLEDYRTEIVNVKGTSFYPFLYLFNNSNLLERINKPISII 486 Query: 437 VDGDE 441 D D Sbjct: 487 TDDDR 491 >UniRef50_Q24NG6 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=Q24NG6_DESHY Length = 708 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 96/519 (18%), Positives = 180/519 (34%), Gaps = 72/519 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + R++I +R + + + NV+IGEN GK+++L AL + DD Sbjct: 39 MYISRLKIQNYRCFQDVEIEFSEGLNVIIGENNCGKTTILKALQCFFKGSNTGSAMGIDD 98 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC---TDGYHRIFYRLEG 116 F I + + +LT +H + + + A W + Sbjct: 99 FNKGIT-IGEKPPEITFVLTI---QSSKHEKAQDKAVVASWLTKLVSPWEATLTYKFFLP 154 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL------------------- 157 E+ + V +R D D + + RHL + P + Sbjct: 155 EADQKRYVADIRCIQDDDDR--NSKKWAVLERHLKKYTPRIYGGNYESKNRADQEYLDKF 212 Query: 158 ------RLRDARF-MRRIRNGTVPNVPNVEVTARQLDFLARELSSHP-------QNLSDG 203 LRD M RN + V N V + ++ E + ++ S Sbjct: 213 HCEVLDALRDVESKMFTGRNALLKQVLNFFVDSDLIEKEETERETLQVQRNQTFESTSSS 272 Query: 204 QIRQGLS--AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM-----IDR 256 + + ++ ++ E A + L + ++ S L I I Sbjct: 273 LVANMIERVSVSKIFELTEKTGAAVGGQPTLGGQLDESDVLSVLKLMIKKETGIEVPIVN 332 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDKDA--RPLLLIEDPETRLHPIMLSVAWHLLN-- 312 G +I + L + + + + ++A P+LLIE+PE LHP + L Sbjct: 333 NGMGYNNLIYISLLLSKFKMLVSSEMGENAKVFPMLLIEEPEAHLHPALQYSFLRFLKDE 392 Query: 313 ----LLPLQRIATTNSGELLSLTPVEHVCRLVRE--SSRVAAWRLGPSGLSTEDS---RR 363 + Q TT+S + + ++ + + + V A+ + +D + Sbjct: 393 MDKQEISRQIFITTHSTHITAAVGLDPIICMNINALGNVVPAYPGKVFSDTADDQASKKY 452 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 I+ ++ + + LF++ L EG E ++ LA G D + ++ K + Sbjct: 453 IARYLDATKSTMLFSKAVLFGEGLAEQILLPILAEYDGRSLDRSHVSMVRVDALTFKHFI 512 Query: 424 KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAER 462 K GI+ E KKYA + R D + R Sbjct: 513 KIFGS-GIQ--------EDRKKYAVSRRVACIIDSDPSR 542 >UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBW9_DICDC Length = 659 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 90/494 (18%), Positives = 170/494 (34%), Gaps = 72/494 (14%) Query: 1 MILERVEIVGFRGINRL--SLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + ++EI GF+ + + ++ + LIG N GK+++L ALT + +S + D Sbjct: 1 MKITQMEIKGFKSFDNVGQTININSFTSLIGGNGTGKTAVLLALTRMFGVKSSDRIIQVD 60 Query: 59 DFWFPPGDI----NGREHHLHIILTFRESLPGRHR-VRRYRPLEACWTPCTDGYHRIFYR 113 DF+ PPGD + RE + + F + G V + + + + Sbjct: 61 DFYVPPGDEIDTQDERELSVRVKFEFADLEDGEDNTVADF--FKHLVSSEAAEIPYCTAK 118 Query: 114 LEGESAEDG--SVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD---------- 161 L+ + + + + G ++I R + + V RD Sbjct: 119 LKAKWTKTNLAEGDIESDLVWEIGE--YEKNITAYERSKIHVHYVPAYRDPAQQLKQTAG 176 Query: 162 ------------ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL------SDG 203 + M + ++ N + + L + + L Sbjct: 177 TIMHRLINAVEWSDQMASTVDEVAVSIGNQFQEEVGVQTITSSLGRNWKTLFTGGYFEKL 236 Query: 204 QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID------RP 257 QI+ ++ + +L+H + L R S+ +S YL ++ D Sbjct: 237 QIKPVVNGIEDVLKHIDTVFLPSPDTQPLPTERLSDGMKSLFYLSLVKSAFDIEDEIINS 296 Query: 258 GGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP-- 315 G+ + + L ++LIE+PE L P L L + Sbjct: 297 DGKQLSISV-------------EALAPPNLTIILIEEPENHLSPQYLGRIVKLCEEISEN 343 Query: 316 --LQRIATTNSGELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFN 371 Q + TT++ LL+ E++ RL + + L P +D+ + Sbjct: 344 DRAQVVLTTHAPSLLNRVEPENIRYFRLHDNKNTIVKEILLPRE-DKDDAENVDTFTYVK 402 Query: 372 R-----PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA 426 P FA+ +L EG++E VI ++A+ G D I + K Sbjct: 403 EAVKAYPEIYFAKVVILGEGDSEEIVIPKIAQVNGIEIDTSLITFAPLGGRYVNHFWKLL 462 Query: 427 RRMGIEWHVLVDGD 440 + I L+D D Sbjct: 463 NELSIPHVTLLDYD 476 >UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Veillonella parvula RepID=D1BNK3_VEIPT Length = 555 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 91/501 (18%), Positives = 169/501 (33%), Gaps = 80/501 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ + I +R + ++L N +GEN+ GKS+ LD L +++ F D Sbjct: 1 MYIKWMHIENYRNLADVTLSFHNDINYFVGENSVGKSNFLDLLEIIMECHG----FIESD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + I E G ++ +T YRL E Sbjct: 57 F-------TDVNKPIRIDF---EISLGE------LNYKSMYTADEG----PTYRLRLEQV 96 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 L D P+ P+ +R A ++ Sbjct: 97 VQEVYPRLYRVTDAGIEPM----------------PLSMIRHALYVCHRDTSEQELFSIP 140 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 +L L + S + ++ +++ + ++ + L+ Y L+ +++ Sbjct: 141 SAVYVELGHLLQAYVSRLE-MATDDLQREIVSLRKDLDPYC-----MLNIQHLIEVLSTS 194 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI----EDP 295 +Y R+I + I + + + + L D R L I ++P Sbjct: 195 SAIERKYSADNVRLIMAVALKILAQIYMKVSSATTNLEALLVYDGKGRKFLPIFISVDEP 254 Query: 296 ETRLHPIMLSVAWHL---------------------LNLLPLQRIATTNSGELLSLTPVE 334 E L P + + ++ L Q T+S + + Sbjct: 255 ELHLSPYLQRAVLNYYRQIATNENEEFLALLRDIFKIDGLLGQLFVVTHSTD-ALVDDYR 313 Query: 335 HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS---LFARCWLLVEGETETW 391 H+ RL R+ + + G++ + + H+ + P + L+ARC ++VEGETE Sbjct: 314 HIIRLYRDENNMVC---AACGVTFNFPKEVEKHLIMHFPEAKEALYARCIIIVEGETEYG 370 Query: 392 VINELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV 450 ++ G FD GI +I S + L K R I L D D GK A Sbjct: 371 SFTGFGKKLGVDFDYFGICLINARGESSISKLQKLFNRFSIPTVALYDRDVEGKYAKAHS 430 Query: 451 RSLLNNDREAEREHLTALPAL 471 + E + ++ L A+ Sbjct: 431 NIFYTQEICFEMDFVSYLLAM 451 >UniRef50_B5V0C9 ATP-dependent endonuclease of the OLD family n=1 Tax=Bacillus cereus H3081.97 RepID=B5V0C9_BACCE Length = 696 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 75/525 (14%), Positives = 169/525 (32%), Gaps = 51/525 (9%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +V+I FR ++ LE +IG N+ GK+S AL L S R D Sbjct: 1 MKLTKVKICNFRSFHKERTIDLEDFTSIIGSNSSGKTSFFQALLKLFGETSREREILRSD 60 Query: 60 FWFP----PGDINGREHHLHIILTFRESLPGRHRVRRYRP--LEACWTPCTDGYHRIFYR 113 F P P + + + + F E + + P I R Sbjct: 61 FHVPSHIDPNALTENHFFIDVTIEFPEVISEDSIAKSTVPPFFGNFIIEEGGKAPYIRIR 120 Query: 114 LEGESAEDG---SVMTLRSFLDKDGHPIDVEDINDQA-----RHLVRLMPVLRLRDARFM 165 E + ++ F GH ++ D++ + L++++ + LR+ Sbjct: 121 QEATWQKSNQPEGIIESNVFFVTIGHGNEILDVHKKMISKAYLSLIKMIYIPALRNPNDQ 180 Query: 166 RRIRNGTV--PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 ++ +GT+ + + + + ++ ++ S + + + L +++ + Sbjct: 181 LKMVSGTLLWRLINRINFEDQFKEDISDQIGSIHEIIDKQKGLSKLKEIIR--TEWKKYH 238 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDI--------INRMIDRPGGRSYRVILLGLFATLLQ 275 + + +N + + +D N +D G + L +LL+ Sbjct: 239 NESRYVNVDLNFNTNNIEDILKKIDANFSPTEVGKNYTVDALGDGLRSLFYFSLVGSLLK 298 Query: 276 AKGTLRLDKDARP-----------------LLLIEDPETRLHPIMLSVAWHLLNLL---- 314 + ++ P L+ +E+PE + P +L L + Sbjct: 299 TEEVTLMEISDNPSLDINDRTFSNTPPLLTLIAVEEPENHVAPHLLGKIVSNLRGISEGG 358 Query: 315 PLQRIATTNSGELLSLTPVEHVCRLVRESS--RVAAWRLGPSGLSTEDSRRISFHIRFNR 372 Q I +++S ++ + ++ ++ + + + Sbjct: 359 NSQVILSSHSASIIKRVDPVEIRHFRNSKEDLGTVINKILLPSKEADEYKYV-KEAVKSY 417 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 P F+ +L EG++E +I + C I ++ + K ++ I Sbjct: 418 PEIYFSSLVILGEGDSEEIIIPRILEDCDLDIHTHEISIVPLGGRHVNHFWKLLTQLKIP 477 Query: 433 WHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 + L+D D + + L L + Sbjct: 478 YITLLDLDIERHGGGWGRIKYVIDQMLLNGTSTEELFHLKEDQTF 522 >UniRef50_D2U0I2 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U0I2_9ENTR Length = 190 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 2/165 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L++VEI GFRGINRLSL L+ N VLIGEN WGKSSLLDALT+LLSP LY F + DF Sbjct: 1 MYLQQVEISGFRGINRLSLTLDHNTVLIGENTWGKSSLLDALTILLSPRQPLYQFNQHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + ++L IIL F E+ P H+V R++ L W D Y RI+YR+ E + Sbjct: 61 HHLVATD-EQINNLQIILVFCENQPNNHKVSRFKHLLPLWIKGDDEYKRIYYRVSAEQ-Q 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 + V T R FLDK G+ + + D N + ++RL PVLRLRDARF+ Sbjct: 119 NNIVATERCFLDKQGNKLVLNDNNKYIQQIIRLYPVLRLRDARFL 163 >UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C0_9THEO Length = 376 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 125/326 (38%), Gaps = 48/326 (14%) Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + ++ M AS+ ++ R +D +D G + +ILL L + A Sbjct: 2 SIDFKPFTPSNYFKTMHILASDPNQNRRDID-----LDELGEGTRNLILLALLRSY--AV 54 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLTPVE 334 + ++ R +L +E+PE LHP + +L + LQ I +T+S + + Sbjct: 55 NLRQYGEEIRGILALEEPEIYLHPQAQRNLFRILREIVSTGLQVIISTHSNNFVDTEFFD 114 Query: 335 HVCR------------------LVRESSRVA-AWRLG-PSGLST----EDSRRISFHIRF 370 + LV ++ V +R G P G +T + + + + R Sbjct: 115 SIGLVRKVDDPENKGCQHTTLTLVSKAELVEHCYRTGVPEGKATIENITEYYKSTSNYRL 174 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRM 429 N + FAR +LVEGETE + E G + D +G+ VI P + + Sbjct: 175 N--EAFFARFLILVEGETEELALPEYLAAVGLNCDQKGVSVIAVQGKNQIPKYWRLFGKF 232 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 I V D D+ G + +N + ++L + L +E ++ + + V Sbjct: 233 KIPMLVFFDNDDDGVDAKGS-----DNQKRKSNKNLASCFGLQLEQILHGKAWDVV---- 283 Query: 490 AQIPENVPMNLRKIISKAIHRSSKPD 515 EN P I+ K + K D Sbjct: 284 --TSENEPATPIVILGKEFETAVKQD 307 >UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax=Enterobacteria phage P2 RepID=VOLD_BPP2 Length = 586 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 92/475 (19%), Positives = 176/475 (37%), Gaps = 25/475 (5%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 L V I FR S +L L+G N GKS+++ A+ LL D + Sbjct: 4 RLASVSISNFRSCKSTSAILRPFTALVGYNNAGKSNIILAIKWLLDGS----LISESDVY 59 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 P E + I SL ++ P T + F + G++ + Sbjct: 60 DP-THPVSVEGVIQGITDDTLSLLTEENQQKIAPFI-IDGTLTFARRQEFNKETGKAKKS 117 Query: 122 GSVMTLRSFLDKDGH-PIDVEDINDQARHLVRLMPVLRL----RDARFMRRIRNGTVPNV 176 V ++ G + +I + H+ + + ++ + +I + V + Sbjct: 118 LDVYDGTTWKKNPGGIDGAISNIFPEPIHIPAMSDAVEDSTKCKNTTTIGKILSAIVSEI 177 Query: 177 PNVEVTA--RQLDFLARELSSHPQNLSDG--QIRQGL-SAMVQLLEHYFSEQGAGQARYR 231 + + + + LS + +N + +I G+ + Q + Sbjct: 178 KQEHEEKFSKNISEIGKYLSHNGENRLESLNKIDSGVNKKVNQFFPDVSVKLHFPTPTLD 237 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL 291 + + + + R + + R I R G + R I + L L + K K + L+ Sbjct: 238 EIFKSGTLKVFESREDEPVMRDISRFGHGTQRSIQMALIQYLAEIKKENSESKKSNTLIF 297 Query: 292 IEDPETRLHPIMLSVAWH---LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 I++PE LHP ++ L+ Q I +T+S +LS + ++ ++S+ A Sbjct: 298 IDEPELYLHPSAINSVRESLVTLSESGYQVIISTHSASMLSAKHAANAIQVCKDSNGTIA 357 Query: 349 WRLGPSGLST-EDSRRISFHIRFNRPS---SLFARCWLLVEGETETWVINELARQC-GHH 403 + + S H F + LF+ LLVEG+TET V+ L ++ GH Sbjct: 358 RKTISEKIEELYKSSSPQLHSAFTLSNSSYLLFSEEVLLVEGKTETNVLYALYKKINGHE 417 Query: 404 FDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNND 457 + I ++ G L + + +GI+ +L D D + LL+ + Sbjct: 418 LNPSKICIVAVDGKGSLFKMSQIINAIGIKTRILADCDFLSNILLTEHKDLLSTE 472 >UniRef50_C7T9Q2 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus GG RepID=C7T9Q2_LACRG Length = 696 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 96/575 (16%), Positives = 192/575 (33%), Gaps = 69/575 (12%) Query: 1 MILERVEIVGFRGINR-------LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDL 52 M L+ V++ FR L + N+++GEN GK++++DA+ +LL SD Sbjct: 1 MFLKTVKLYDFRKFVSQVNGEPGLIVKFHPGLNIIVGENDSGKTAVIDAIKVLLGTVSDD 60 Query: 53 YH-FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 + +DF+F D + I F + + H + Sbjct: 61 RTSIQDEDFYF---DGTEFSNDFKIEAVFCSLNKYE--AGTFLEWLSFDDNNEYELH-VK 114 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG 171 +E +++E G R+ + G + AR +R+ + LR+A + G Sbjct: 115 LTVERKTSEAGRQYLDRNLVA--GDEGAESSLASGARVYLRVTYLKALRNATD--ELTPG 170 Query: 172 TVPNVPNV-----------EVTARQLDFLARELSSHPQNLSDG--------QIRQGLSAM 212 ++P + E + + L + LSDG + LS Sbjct: 171 FRSHLPQLLAAHSEFRNHPEHKLKLVQALEEANAIIEGYLSDGFPSESNPPKDNDHLSDN 230 Query: 213 VQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 + E + + + + ++ R ++++ + S V L Sbjct: 231 NLEKQSINKELHSVLRQLFDSQDQDKSDTRFQLTQVTLDQIFKQLSLSSESVNLGLGNLN 290 Query: 273 LLQAKGTLRLDKDARP-------LLLIEDPETRLHPIMLSVAWHLLNL--------LPLQ 317 LL L L KD ++LIE+ E LH + Q Sbjct: 291 LLYISTELALLKDHSSSVVYGPNIMLIEELEAHLHVQAQIRLIKYIERYILSTEDNSSQQ 350 Query: 318 RIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLF 377 I T++S L + + + +++ + + L D ++ + + + F Sbjct: 351 FILTSHSVALTASIDQRSLIYM--NANKAYSMAPEDTMLEEADYDFLNRFLDATKSNLFF 408 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR------MGI 431 A+ +LVEG E ++ LA GI ++ + +K + +GI Sbjct: 409 AKGIILVEGYAENILLPALADLINLPLHRSGISIVNVGGTSFNQYIKLFSQKEKSEKIGI 468 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 ++ D D Y + AE+ D+ ++ + ++ +A Sbjct: 469 PISIITDSDINPTVYGI-------DSESAEKIQELISGPSDLNVDLFGEEYATFAELVAA 521 Query: 492 IPEN-VPMNLRKIISKAIHRSSKPDLAIEVAMEAG 525 ++ +I + S D A + A Sbjct: 522 FKLRFENTKIKNLIIQVKKFRSDSDWASKTAERQE 556 >UniRef50_Q84GD0 Yga2G n=1 Tax=Corynebacterium glutamicum RepID=Q84GD0_CORGL Length = 645 Score = 188 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 84/487 (17%), Positives = 158/487 (32%), Gaps = 57/487 (11%) Query: 1 MILERVEIVGFRGIN--RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + + + F+ SL L ++G N GK+++L+AL+ L SP + Sbjct: 1 MKITVLRLSNFQSFGQGPTSLNLTDITYVLGPNGAGKTAVLEALSRLFSPVAAQRTIRIS 60 Query: 59 DFWFPPGDING------REHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 DF P + + + F E+ + + +DG ++ Sbjct: 61 DFHIPATSGTSGIQNEEPTLWIEVDIEFPEAASEDYHASVPPNFDHMMIESSDGVPKVRI 120 Query: 113 RLEGESAEDGSVMTLRSFL---DKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 RL + A DG V ++ D+ G P +++ R + + + RD Sbjct: 121 RLTAKLAVDGVVEEKIEYIRQADELGEPTVRAEMSRYDRGHIEVHYLPARRD-------- 172 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGL-------SAMVQLLEHYFSE 222 P+ T + R + + + + + L SA+ L H +E Sbjct: 173 ----PSDHIAYTTTSLIGRTLRAVDWSQERTTLADLAEQLTSALTSNSAVSSLGLHLATE 228 Query: 223 -----QGAGQARYRLMRRRASNEQRSWRYL-------DIINRMIDRPGGRSYRVILLGLF 270 QG + R E + D DR ++ + L Sbjct: 229 WRGLHQGGFFTDPTIAFGRGELEGVLRQLTINFSPSHDEAAVPFDRLSDGQKSLLYISLV 288 Query: 271 ATLLQ-----------AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL----NLLP 315 + +L ++ +E+PE L P L L + Sbjct: 289 LAWQSLVRRVLRNEETSLDPNKLRPPVHTIIALEEPENSLSPQYLGRIIRQLHNACDQGD 348 Query: 316 LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS 375 +Q + T++ LL E +C L ++R + + + + P Sbjct: 349 VQALIATHASTLLRRVEPESICFLRLNTARETTVHRISLPENNDTAAKYVREAIHAYPEL 408 Query: 376 LFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHV 435 F+R +L EG++E V+ + G D I V+ + + + I Sbjct: 409 YFSRLIVLCEGDSEQVVLPRVLAAAGIAEDDASISVVPLGGRHVNYFWQLLNELKIPHVT 468 Query: 436 LVDGDEA 442 L+D D A Sbjct: 469 LLDLDSA 475 >UniRef50_C2NJX4 Putative uncharacterized protein n=1 Tax=Bacillus cereus BGSC 6E1 RepID=C2NJX4_BACCE Length = 664 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 78/494 (15%), Positives = 181/494 (36%), Gaps = 35/494 (7%) Query: 1 MILERVEIVGFR--GINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M++ + + FR G + E LIG N+ GK+SL+ AL L ++ + Sbjct: 1 MLISELHVSNFRSFGYESQMIETENLTALIGANSSGKTSLIMALLRLFGQKNTDRTLIKT 60 Query: 59 DFWFPPGDINGREHHLHIILT----FRESLPGRHRVRRYRP--LEACWTPCTDGYHRIFY 112 DF P G + + +++ F E + P ++ + Sbjct: 61 DFHIPEGADVSKIKEIDLMIEAKIIFPELKLQSPVDVKTIPEYIKHLIIEKAGEEPYLRI 120 Query: 113 RLEGESAED----GSVMTLRSFL----DKDGHPIDVEDINDQARHLVRLMPVLRLRD-AR 163 RL+G+ + G++ ++ + D+ + + L+++M + +RD A+ Sbjct: 121 RLKGKWIQGSTPEGNIEQELVYVKIPYGHEEKEEDLTKVPIHHQKLIQMMYIPAMRDPAK 180 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE- 222 ++ + + + L+ + L+S + L +I + + +L +S+ Sbjct: 181 QLKNASGTLLWRIFDGIDWPENLNEDIKSLTSPIETLFK-EI-PSIKGIQGILNTQWSKY 238 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDII--------NRMIDRPGGRSYRVILLGLFATLL 274 G+ + ++ + ++I+ + +D G + + L +TLL Sbjct: 239 HNDGRYSNSQFKFNGNSLDEFLKNVEILFNPTIDGNSVKVDSLGDGLKSLFYITLVSTLL 298 Query: 275 QAK-GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLS 329 + + + DK + IE+PE + +L L + Q + ++++ ++ Sbjct: 299 EIENKQEKDDKPLLNIFAIEEPENHISQHLLGRIVRNLKEIAAKDNAQVVLSSHNSSIVG 358 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 E++ L + + + I P F++ +L EG++E Sbjct: 359 KIEPEYIRHLQIQDIGSIVNNISLPEKIDDAHTYI-KEAVKAYPDLYFSKLVILGEGDSE 417 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA-GKKYAA 448 V+ +L + D I ++ + + K + I L+D D G Sbjct: 418 EIVLPKLLLADDIYLDDFNISIVPLGGRHVNHMWKLLNDLSIPHITLLDLDRERGGGDWT 477 Query: 449 TVRSLLNNDREAER 462 ++ +L + R Sbjct: 478 RIKYVLKQLNKNNR 491 >UniRef50_C0QF29 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QF29_DESAH Length = 658 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 110/652 (16%), Positives = 200/652 (30%), Gaps = 115/652 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ V I +R + + ++ L+G N GKSS++ AL LL +P + + + F Sbjct: 1 MKLKWVYIKNYRSCKDVRINIDSMQALVGANNAGKSSIIRALDLLFNPSTT--KVDEETF 58 Query: 61 WFPPG------------------DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 W + + L TF + ++ P E +P Sbjct: 59 WNGDSELQIWIEAVFNELSDAEKEDEKLKPFLRPDDTFHIARSATWKIEE--PEEEGASP 116 Query: 103 CTD-----------GYHRIFYR---------LEGESAEDGSVMTLRSFLDKDG------- 135 ++ + E +D + FL G Sbjct: 117 GDGKPVISQHFCKPMPKYVWLQEGQINGKNITEWWKNKDDLKVGDADFLGYTGTSKPAVG 176 Query: 136 ------------------HPIDVEDIND-----QARHLVRLMPVLRLRD----ARFMRRI 168 D L + V +RD A+ + Sbjct: 177 VWKEKVKEFIEAHLTDDDFEDVWNDNPQGYAGVLKGTLPHFIFVPAVRDITDEAKVTKTN 236 Query: 169 RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA-------MVQLLEHYFS 221 G + VTA+Q L L + L+ + L + + +L+ Y S Sbjct: 237 PFGKLLYAVLESVTAQQKAELETTLEGLQKRLNRIGGAERLESIVETEKKLNDVLKEYMS 296 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 + + + + Q D M+ G R I+ + + Sbjct: 297 CDLEIEFQSPSVETLLTTPQLFAD--DGFRNMVTNKGHGLQRAIIFSILRCYSELVTGAG 354 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLN---LLPLQRIATTNSGELLSLTPVEHVCR 338 K + +E+PE +HP + Q + +T+S LL + + V R Sbjct: 355 EQKKKPMIFAVEEPELYMHPQAQRNIRKVFRGIADKDDQVLFSTHSSLLLDVAYFDEVIR 414 Query: 339 LVRESSRVAAWRLGPSGL--------------------STEDSRRISFH-IRFNRPSSLF 377 + + + S + + E R + H NR F Sbjct: 415 VESTQEEIDGKKTVKSKVWQLPMWVMIEDLKARHGKDATAESMRELYSHAYHPNRSEGFF 474 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVL 436 A+ +LVEG TE + + A GH DA I V++ G + L + +GI +L Sbjct: 475 AKSIILVEGATEQYSLPIYAEASGHQLDALNISVVDSGGKGSMDRLYRIFNELGIPCFIL 534 Query: 437 VDGDEAGKKYAATVRSLLNNDREAE-REHLTALPALDMEHFMYRQGFSDVFHRMAQIPEN 495 D D +S+ E + A+ D + +D+ +IP Sbjct: 535 FDYDRGNGDKNIVDKSVELLGLIGEPTDPPDAIMIRDNVACFPHKWETDL---APEIPGV 591 Query: 496 VPMNLRKIISKAIHRSS-KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 + +H S KP +A +A + + VP + + + + + Sbjct: 592 EKLTADARKDMGLHGYSGKPLVARYIARKLTSQDPPVVPPSIHSILEKAVAV 643 >UniRef50_Q21PB9 ATP-dependent endonuclease of the OLD family n=3 Tax=Proteobacteria RepID=Q21PB9_SACD2 Length = 666 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 94/542 (17%), Positives = 175/542 (32%), Gaps = 57/542 (10%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E++ I FR R + + + V IG N GK++ + AL+ L S + Sbjct: 1 MKVEQISITNFRCFGRETTTFTLQDNSTVFIGSNGSGKTAAIQALSRLFGVTSKQRQVRK 60 Query: 58 DDFWFPPGDI---NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 DF +G + +IL+F + G + L Sbjct: 61 TDFHIEHDKDELASGSTLSIDVILSFPGHDEPDGADTIPEFFQQMAVETPGGDLKARIIL 120 Query: 115 EGESAEDG----SVMTLRSFLDKDGHPIDVEDINDQA----RHLVRLMPVLRLRDARFMR 166 + + +DG SV + + + D E + R ++L+ + R+ Sbjct: 121 KAKWIDDGTPLGSVEEDIRWAPRLTNNFDWEKDCTRVQASERSRIQLIYIPAHRN--ISE 178 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQN--LSDGQIRQGLSAMVQLLEHYFSEQG 224 ++ N + + LS + Q ++ + L + + Sbjct: 179 QVTNLIKSRFWQAAKWSDEFRNHVEALSKNIQASYANEAPAKLLLEKLSSRWKQVHDADT 238 Query: 225 AGQARYRLMRRRA------------SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 R +L+ R NE R L ++ + L Sbjct: 239 DTDPRLKLIDSRFERIIQNAGFTFFPNEFGQERDLADLSDGQKSLFHIALTAATLEAELA 298 Query: 273 LLQAKGTL------RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATT 322 ++ ++ + LL IE+PE L P LS + Q + ++ Sbjct: 299 AIEMNYEDSPFDHDKMRRVCLTLLAIEEPENSLSPFFLSRIIEQALEIGSLDAAQVLISS 358 Query: 323 NSGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCW 381 +S ++S E+V + S+R ++ + E++ + P FARC Sbjct: 359 HSASIISRLEPENVRYFRLDRSNRTSSVQKILLPEDDEEASKFIRLAVKAYPEIYFARCV 418 Query: 382 LLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 +L EG +E VI LA G D + V+ K + I + L+D D Sbjct: 419 ILGEGASEEIVIPRLAEAMGFPLDPSFVPVVPLGGRYCVHFWKLLSDLKIPFVTLLDLDA 478 Query: 442 ----AGKKYAATVRSLLN------------NDREAEREHLTALPALDMEHFMYRQGFSDV 485 G K L+ DR + + + L D+ + + +V Sbjct: 479 GRSHGGAKLVQGTADRLDEMGIDWNSNSVVEDRLLDPDKIDTLEDADIWYDFDDNDWLNV 538 Query: 486 FH 487 F Sbjct: 539 FE 540 >UniRef50_A7N6N8 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=A7N6N8_VIBHB Length = 669 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 87/488 (17%), Positives = 154/488 (31%), Gaps = 50/488 (10%) Query: 1 MILERVEIVGFRGINRL-SLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L +V I F+ +L + E+ LIG N GK+S L AL+ + D Sbjct: 1 MKLSKVRISNFQCFGKLTEIEFEEDLTALIGLNGSGKTSTLHALSRMFGVTESSRKVLVD 60 Query: 59 DFWFPPGDINGREHH-LHIILTFRESLPGRHRVRRYRPL-EACWTPCTDGYHR------I 110 DF P + E + F E G + C++ +G + Sbjct: 61 DFHCPSSNTFRAEKLFIEAWFEFPELQGGDDLTAVASTFNQMCFSSEGNGKTEGGVKTLL 120 Query: 111 FYRLEGESAED-----GSVMTLRSFLDKDGHPIDVEDINDQARH---LVRLMPVLRLRDA 162 RLE E D G V F+ D D + R +++ + R+ Sbjct: 121 RVRLEAELTVDDVSPEGIVNETVYFILSDKDDFDASEKRVLRRSDRNNIQVHYIPASRNP 180 Query: 163 RFMRRIRNGTV----PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + I + T + ++ + L + + + + +S + LE+ Sbjct: 181 --FKEISSSTKILLGRLLDAIQWSKGPEGELQKAVEYTEKASDEISKNAAVSLIQGHLEN 238 Query: 219 YFSEQGAGQA--------RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLF 270 + + AG S+ ++R ++ + + Sbjct: 239 SWDQMYAGDLFSKAKLNFLPLQSEDLLKTISLSFESASGAVASMERLSDGQRSLLHISII 298 Query: 271 ATLLQAKG-------------TLRLDKDARPLLLIEDPETRLHPIML----SVAWHLLNL 313 + + + RL + +L +E+PE L P L L Sbjct: 299 QAVHEMESKTLQDMENRRHFDQKRLKRPIYTMLALEEPENHLAPHYLGRIVKSMVKLAKK 358 Query: 314 LPLQRIATTNSGELLSLTPVEHVCRLVRE-SSRVAAWRLGPSGLSTEDSRRISFHIRFNR 372 Q TT+S L+ + + +E S ++ + Sbjct: 359 TNAQVAVTTHSPSLVGRIEPKQIRHFRQEKQSHTTIVSKIDLPSPEDEQYKFVSGAVKAY 418 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 P FAR +L EGE+E VI +L CG D I V + + + I Sbjct: 419 PEIYFARLVVLGEGESEQIVIPKLLSHCGVDIDDSFISVAPLGGRHVNHFWRLLEGLNIP 478 Query: 433 WHVLVDGD 440 + L+D D Sbjct: 479 YVTLLDLD 486 >UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHR4_9ACTN Length = 668 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 100/571 (17%), Positives = 176/571 (30%), Gaps = 110/571 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDL------YH 54 M + + + +R + R+ L + L+G N GKSS+L AL + YH Sbjct: 1 MKVSHIVVENYRSLRRVELSVTDYTALVGANGSGKSSVLYALQWFYEGGALEGEDICGYH 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRE-SLPGRHRVRRYRP-----LEACWTPCT---- 104 D + + +TF + + R R+R Y W Sbjct: 61 RPADGEVLDESSDAIAARTVSVTVTFSDLTSQDRSRLREYGRGDTAVFRKSWVLGDAKPK 120 Query: 105 -------------------------------------------DGYHRIFYRLEGESAED 121 ++ L A+ Sbjct: 121 VVGNAKQGPGFAELRTMKLVGDFRPAYASLRHSQEGLPDLGGSPSRDQVSDALVAWEADP 180 Query: 122 GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEV 181 + +L D D + + D + RL+ + + + Sbjct: 181 ANGASLVDIADNDANHMFGIDGPNIILRCSRLVLIPAAAEISNQVGSSGKGSALGDLIGA 240 Query: 182 TARQLDFLAR---------ELSSHPQNLSDG-QIRQGLSA---MVQLLEHYFSEQGAGQA 228 AR EL+ ++ + GL A +L+E + + Sbjct: 241 FMSNAGATARAKWQSTYADELAELNSSVKRSVEASTGLQASRINSKLVELVPNAAVSFVP 300 Query: 229 RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL-------------- 274 + + +D + + G R I++ +F +LL Sbjct: 301 AVPDWTPKGEASVTTDVTIDGTTNDVSKQGHGIQRAIMIAMFQSLLPDAALLAGSHNAHA 360 Query: 275 -------QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTN 323 QA+ L ++ IE+PE HP+ +L L Q + T+ Sbjct: 361 DETVDEAQARLQEELANLPTLVVCIEEPEIYQHPVRARAFARVLAALASQQGGQVLLATH 420 Query: 324 SGELLSLTPVEHVCR--LVRESSRVAAWRL-GPSGLSTEDS----RRISFHIRFNRPSSL 376 S + V R LV S+V L G + LS ++ + + + + Sbjct: 421 SPYFVRPDQFSSVRRFRLVSGVSKVRRTSLAGVAALSGDEEVKVQKILEKRLPTSFSEGF 480 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIEWHV 435 FA +LVEGET+ V+ +A G D+ G+ V+E A+ LK + I +V Sbjct: 481 FADAVVLVEGETDKAVLEAIAEVLGQPLDSIGVCVLEVSAKDSLKIPYSLFSALEIPTYV 540 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 + DGD G R+ + EA H + Sbjct: 541 IADGDALG-----AARTYPDKQNEAANAHAS 566 >UniRef50_C0WFY9 ATP-dependent OLD family endonuclease n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WFY9_9CORY Length = 607 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 119/570 (20%), Positives = 198/570 (34%), Gaps = 70/570 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FER 57 M LE I GFR + + +L+GEN GKS+++DAL L +P S FE Sbjct: 11 MWLESARIKGFRSCEKTEVEFCPDLTLLVGENNAGKSNIIDALRLATAPLSGRRTRFFEI 70 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DD F G + ++ T + + + A +H + Y + Sbjct: 71 DDPSFGAGVNPD----IELVYT----EGDEFQQALF--IGALDLQSKKIHHHVRYFSPTD 120 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT-VPNV 176 G L + D + R + + + LRDA+ NG + +V Sbjct: 121 RYPRGRTERL-------AGLVASPDPESEVRSKINHVYLEPLRDAKRELDSANGRRLGSV 173 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + ++ + + + + LS QG+S +Q ++ GQ + Sbjct: 174 LRYLLDEKEREEFLQSAHTATEQLSGSGAIQGVSKKIQEHLSSLTDAVRGQQVALGFEKP 233 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL---DKDARPLLLIE 293 + + L + + ID LG L + L L ++ LLL+E Sbjct: 234 SLDHLARGLRLKMAEKGIDVTN---LASSGLGYANLLFMSTILLELQEANQSELTLLLVE 290 Query: 294 DPETRLHPIMLSVAWHLLNLLP---------------LQRIATTNSGELLSLTPVEH--V 336 +PE LHP + V L +Q I TT+S L S +E V Sbjct: 291 EPEAHLHPQLQGVLLDFLLEQAEESVKSAKEGRPAGRIQVITTTHSPNLASSVGIERTVV 350 Query: 337 CRLVRESSRVAAWRLGPSGLS---TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 R + + ++ L + D R+I ++ R LF + +LVEG +E ++ Sbjct: 351 IRSAKRDNLRSSVALALKQIEFANDNDRRKIDQYLDVTRSDLLFTQRVILVEGISEAVLL 410 Query: 394 NELARQCGHH---------FDAEGIK-VIEFAQSGLKPLVKFA-----RRMGI--EWHVL 436 LAR C ++ +P + M I + VL Sbjct: 411 PALARHCVFDRSDPEQLKRLRRFNATPIVNLGSVDFRPYLTLLLYDFGEGMHIADKVVVL 470 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 D D + A N E E T L A D+ + ++ + EN Sbjct: 471 TDEDPTLEGSEAKS---FNRAEELES-IATKLKAEDI-LTVKTTEYTLEATLLTGASENA 525 Query: 497 PMNLRKIISKAIHRSSKPDLAIEVAMEAGR 526 + + + + K D AI+ A E GR Sbjct: 526 QLLRKAFLQQHPKSHCKWD-AIQDAQEPGR 554 >UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGE8_9BACT Length = 629 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 105/537 (19%), Positives = 195/537 (36%), Gaps = 55/537 (10%) Query: 1 MILERVEIVGFRGINR--LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYHFE 56 M L +++I FR L ++ Q NVLIGEN GKS+++DA+ +L+ +S + + Sbjct: 1 MYLLKLKITNFRKYGDPGLEVIFNQGLNVLIGENESGKSTIIDAVRYILNTQSYEYIRVQ 60 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPG----RHRVRRYRP--LEACWTPCTDGYHRI 110 DF E + T + W RI Sbjct: 61 ETDFHCNQAGNRAEELKIECEFTGFTDQEAGNFLEWLGFDENNNFVLRVWLSAIIKTDRI 120 Query: 111 FYRLEGESAEDGSVMT--LRSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDARFMRR 167 + G+V R L P+ +I + R +L+ A + Sbjct: 121 IVNTRAGMDDTGTVFESGARDLLRVTYLKPLRDAEIEMSSGRRSRFAQLLKSHPAFQKKP 180 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 + T+ + Q F + + + + + + + Q L Y SE + Sbjct: 181 NESHTLEEIVEEADKKIQQYFGQQTGLTIGTKPIEPEGKIIIDEIEQALNSYTSE--DIK 238 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + + + W L ++ ID+ + LG+ L A L L +D Sbjct: 239 NKP----FVSLSGVELWAILQRLSLQIDK------NLPSLGMMNLLYIAAEFLLLKRDGY 288 Query: 288 P---LLLIEDPETRLHPIMLSVAWHLL---NLLPLQRIATTNSGELLSLTPVEHVCRLVR 341 L+L+E+ E LHP L Q I TT+S L S P+E++ V Sbjct: 289 TGLKLVLLEELEAHLHPHYQLNVLQYLIDNYNSIGQTILTTHSVILGSSIPLENMI--VC 346 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 + +RV + L D + + + + FA+ ++VEG+ E ++ +A G Sbjct: 347 KGNRVYPMGHDYTMLDQIDYLFLERFLDATKANLFFAKGIIIVEGDAENLLVPAIADVIG 406 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARR-----MGIEWHVLVDGDEAGK----KYAATVRS 452 + GI +++ K +R +G+ ++ DGD + KY V + Sbjct: 407 FPLNKYGISLVKVGSKAWKRYANIFQRTDGSGLGMRVAIIADGDVPCREHLTKYPPKVYT 466 Query: 453 LLNND------------REAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVP 497 L +N+ ++ ++ +AL D +H + + + D + + + P Sbjct: 467 LEDNNVRYIGTDLVGFTQQMKKHSQSALITKDGKHPL-TEDWIDDYLQFVSSSQEKP 522 >UniRef50_Q2IEH8 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEH8_ANADE Length = 615 Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 98/513 (19%), Positives = 176/513 (34%), Gaps = 87/513 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +++ FR ++ ++ VL GEN GK+++L+AL LL P R Sbjct: 1 MYLSSLQLTRFRSFRDGTVYFDETLTVLAGENNSGKTNVLEALRLLTPPSDG--RVVR-- 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 W P DI I T+ + + T + + + G+ Sbjct: 57 -WPEPRDITRGFESFSIRGTYSALDDRQ--RGSFLTCLRGPTSDSASLGLQYAEVPGKR- 112 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTVPNVPN 178 R + P+D +I +AR LVR + + LRDA R + G + ++ Sbjct: 113 --------RGERSRVVGPLDAPEIEPKARELVRHVHLPALRDASRELASSAPGRIEHLLR 164 Query: 179 VEVTARQLDFL------ARELSSHPQNL--SDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 T Q + L A EL + ++ Q+++G+ A+ + + + G Sbjct: 165 RTATDEQREALVAKARQALELLKADPVIGAAEAQVQEGVRALTAGVHPHEAHLGFAD--- 221 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 + A + + + + G V+ L L L L L Sbjct: 222 PTLTDLARDLRLRLGLAGMPAADLYESGLGYANVLFLALVVVELANTADADL-----TLF 276 Query: 291 LIEDPETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVE 334 L+E+PE LHP + +V L +Q I +T+S L S + Sbjct: 277 LVEEPEAHLHPQLQAVMLEYLRDKAEESQRRARSPGEYAGRIQVIVSTHSPHLTSAVGSK 336 Query: 335 HVCRLVRESSRVAAWRLGPS------------------------GLSTEDSRRISFHIRF 370 V L ++ + + P+ L ++ +I ++ Sbjct: 337 KVVILRTQAGPDVSPEVAPAGAAGRGGEAASASSFSAAVSLAQIRLREDEREKIDRYLDV 396 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQC----GHHFDAEGIK-VIEFAQSGLKPLVKF 425 R + LF+R LLVEG +E +I + ++ + +P V+ Sbjct: 397 TRSAMLFSRRVLLVEGISEALLIPAFGKVLYRGKSTELARLTASTIVPISGVDFEPYVRL 456 Query: 426 A--------RRMGIEWHVLVDGDEAGKKYAATV 450 +R+ VL D D A + + Sbjct: 457 LLTPDPGSGKRVADLVVVLTDEDPASETAKQEI 489 >UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWN1_ACICJ Length = 647 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 77/394 (19%), Positives = 136/394 (34%), Gaps = 18/394 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + R+ I FR + L + L + VLIG N GK+++LDA+ ++L+ F + Sbjct: 9 MRITRLHIENFRSVRNLDIELGETTVLIGPNNAGKTAILDAVRIVLTRRWGQRGTGFTEN 68 Query: 59 DFWFPPGDINGREHH-LHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLE- 115 D P D + R + I++ ES G LE T + + ++ Sbjct: 69 DVHRPEPDGDPRTLPPVRIVIAMEESRSGEWDPDMVAALEDIITVTADRMRNLLTVQVTC 128 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL---RLRDARFMRRIRNGT 172 S E + FLD G P+ MP+ LRDA R+G Sbjct: 129 AWSEEKEAFDPAWQFLDSAGVPLRERRRAINLTGFFSYMPLFWLGALRDATNEFTPRSGH 188 Query: 173 VPNVPNVEVTARQLDFLA-RELSSHPQNLSDGQIR-QGLSAMVQLLEHYFSEQGAGQARY 230 + +L+ A R L+ ++ R ++ M+ +G G AR Sbjct: 189 WGRLLRSVRIPDELEAEALRILAELDARIAAADPRLAEIAEMIGQATRVAIGEGPGGARL 248 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDR------PGGRSYRVILLGLFATLLQAKGTLRLDK 284 + E + + N + G + ++ LF + + Sbjct: 249 ATL-PLGIEEMLQRTGIVLRNEELRPWLPLGHHGQGLQSLAVIFLFQAAVLQQLAEAERP 307 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 + IE+PE LHP W + L Q++ +T+S L P+ + + Sbjct: 308 GVEAVFAIEEPEAHLHPQAARTLWEHVQALAGQKLMSTHSPYFLQHVPLRDIRLVCLRGG 367 Query: 345 RVAAWRLGPSGLSTEDSRR-ISFHIRFNRPSSLF 377 L +S ++ + + F Sbjct: 368 CTEIATLPRYVVSDLPWNDAVNGFLNGSAGRIFF 401 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%) Query: 357 STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ 416 + ED + FH R R FAR W++VEG TE +++ L + G D G+ VI+F Q Sbjct: 452 TAEDEEELGFHGRRVRGEIFFARRWIMVEGVTEYLLLHALGKALGWPLDDHGVAVIDFQQ 511 Query: 417 SGLK-PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEH 475 SG A GI W+++VDGD G+K+ + +D E E +T P D+E Sbjct: 512 SGNAGIYPALAEAFGIPWNMIVDGDHEGEKFRRQIIDRGFDDEELEGRFVTLTPQNDLED 571 Query: 476 FMYRQGFSDVFHRMA 490 + G + + Sbjct: 572 QLLADGHEQMLREIL 586 >UniRef50_C6D7P9 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7P9_PAESJ Length = 695 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 78/548 (14%), Positives = 171/548 (31%), Gaps = 98/548 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER-- 57 M +E+V+I FR ++ + L++ V++G N GK+S + LLS + + E Sbjct: 1 MRIEKVKIKNFRLLHDAEITLDEKTTVIVGRNNSGKTSFTEVFRRLLSDTTAKFKLEDFS 60 Query: 58 ----DDFWFPPGDINGREH---------HLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 +DFW + + ++ + L+ + + + + P+ Sbjct: 61 IPVHEDFWRAFLLMKEGQEDQQIREVLPYIQVTLSLKYDIETDN----FGPMGEFVIDLD 116 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVR-LMPVLRL---- 159 L DG + +L ++ G P E +++ +P+L Sbjct: 117 PDSTHCVTLLR-YQLSDGKISSLYGDIEYTGEPDKTEIEKMNFYRVIKERVPLLYSTSVY 175 Query: 160 ----RDA------------RFMRRIRNGTVPNVPNVEVTARQL--DFLARELSSHPQNLS 201 +D+ ++ + + R + + R L + S Sbjct: 176 AIDPQDSSNQKKLDLTLFRELLQTGFIQAQRGLDDTTYKDRDILGGIVERMLDIAKSDNS 235 Query: 202 DGQ-------IRQGLSAMVQLLEHYFSEQGAG--QARYRLMRRRASNEQRSWRYLDIINR 252 + + + ++ F++ A S + R Sbjct: 236 KSADNTTVSLLESAVKEIQLKIDSDFNQHVNKLLPALSLFGYPGLSTLPLLTETTLDVKR 295 Query: 253 MIDRP--------------------GGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 +++ G R+ IL LF K L+ I Sbjct: 296 LLENHTKVNYPGINGVNLPEAYNGLGSRNLIYILFHLFEFFKMYKARKTAANFH--LIFI 353 Query: 293 EDPETRLHPIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCR 338 E+PE LHP M V L + P+Q + TT+S + + + + Sbjct: 354 EEPEAHLHPQMQEVFIRKLTEIADEFSRQFNSGQPWPVQFVITTHSTHIANEASFDSIRY 413 Query: 339 LVRESSRVAAWRLG---PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + + L + D + ++ + FA +L+EG TE ++ + Sbjct: 414 FLNKEMNTHVKDLNLGFNNDSQNGDKEFLHKYLTLTKCDLFFADKAILIEGPTERILMPK 473 Query: 396 LARQCGHH------FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 + + + ++ + +IE + + + I ++ D D + Sbjct: 474 MIEKVENESSHVRQLSSKYLSIIEVGGAYAHHFIYMLNFLEIRTLIITDIDSVESTNQSR 533 Query: 450 VRSLLNND 457 + L + Sbjct: 534 RKKCLVSQ 541 >UniRef50_C7VU27 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU27_ENTFA Length = 674 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 74/484 (15%), Positives = 166/484 (34%), Gaps = 53/484 (10%) Query: 1 MILERVEIVGFRGINRL--SLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L R+EI FR ++ ++ +IG N+ GK+++L+A+ + + Sbjct: 1 MKLTRLEICNFRSFGSEAETIYFDEFTGIIGHNSAGKTTILNAINAMFGN----LKLRKS 56 Query: 59 DFWFPPGDINGREHHLHII--LTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DF+ + L I F ++ T E Sbjct: 57 DFYADNNESENEPLSLWIKAKFEFFNVDNDPQSYSVPSFFQSFTISETGEAPYTEILFEA 116 Query: 117 ESAE----DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT 172 E + +G + T ++L G + R + ++ + +R+ +GT Sbjct: 117 EWQQGNTPNGVIETSLNYL-LVGEEEKKFPMPLLDRSKIDVIYIPAIRNPYDQLSNASGT 175 Query: 173 -----VPNVPNVEVTARQLDFLARELSS-----------------------HPQNLSDGQ 204 + + E Q+ L ++ Sbjct: 176 ILWRLLKQLNWKEGDKEQISEKIAALDEAISAQEGISLLEKTISSQWKTYHTDSRFAEAS 235 Query: 205 IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRV 264 ++ G + + ++L+ E + +S Y +I+ + + + + Sbjct: 236 LKFGSTDLEKILKKLEVEFSPSPFEQTYRVGDLGDGLQSLFYFSLIDAFL-KLEEKGLKE 294 Query: 265 ILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIA 320 + G+ ++ TL ++ A LLL+E+PE ++P +L A L + Q I Sbjct: 295 VSTGV----MEESRTLNVNPPAITLLLVEEPENHINPQLLGNALSNLKSISNNANSQVIF 350 Query: 321 TTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE--DSRRISFHIRFNRPSSLFA 378 T++S ++ E++ + R + + L + ++ + P F+ Sbjct: 351 TSHSPSVIKRMDPENIRHI-RMDKLKKSTVVNEITLPDDNGEAYKFVKGAIQVYPELYFS 409 Query: 379 RCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVD 438 + EG++E +I ++ + D EGI ++ + + + I + L+D Sbjct: 410 SLVIFGEGDSEELLIPYFLKKKFPNLDTEGISIVPLGGRHVNHFWRLLSMLKIPYITLLD 469 Query: 439 GDEA 442 D+ Sbjct: 470 FDQE 473 >UniRef50_C2I056 Putative uncharacterized protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2I056_VIBCH Length = 663 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 83/524 (15%), Positives = 156/524 (29%), Gaps = 83/524 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLI-GENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ V I +R + +S +++ LI G N GK+S +A L+P + +D Sbjct: 1 MKIKNVRIKNYRLLKDVSFSIDEKTTLIVGRNNTGKTSFAEAFRSFLNPAGPKVRY--ED 58 Query: 60 FWF---------------PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 F D R I L + + Y L Sbjct: 59 FNQSCLTGFEDALNALQGGAEDDVVRSMLPTIELEL--LINYQDNADEYGVLGDFIIDFD 116 Query: 105 DGYHRIFYRLEGESAED---------GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP 155 D + + + SV + F D + N A L Sbjct: 117 DQLFETIILISYQLKDGKISEFLGGLDSVNRKQYFADLRSRIGLHYEANVYAVEPTNLNN 176 Query: 156 VLRLRDARFMRRIRNGTV---PNVPNVEVTARQL------------------------DF 188 RL + F + + +G + + + R + Sbjct: 177 KARLEFSSFKKLLLSGLINAQRGLDDETHNERDVLGKSLGHIFKSASSVGAPEAFKAQSA 236 Query: 189 LARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRS----- 243 + Q + D +Q + A++ L + + S Sbjct: 237 EINTVVEELQEIVDTDFQQKVQALLPTLNIFGYPGLHDPNLSAATELNVKSLLESHTRVF 296 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 ++ D G +I + + ++ IE+PE LHP M Sbjct: 297 YQRDDHFTLPETYNGLGMRNLIFILFRIYEYFREFQSHQTPPKGHVIFIEEPEAHLHPQM 356 Query: 304 LSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCR-LVRESSRVAA 348 V L + P+Q I +T+S + + V L + + Sbjct: 357 QEVFIRQLEQIVEQFQRELNDQQVWPVQFIVSTHSSHIANEADFSKVRYFLSKNGNETKV 416 Query: 349 WRLGPSGLSTE---DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ----CG 401 LG + S E D + ++ + FA +LVEG TE ++ ++ ++ G Sbjct: 417 KDLGVAFQSEEAAGDREFLHKYLTLTKCDLYFADRAILVEGATERILLPQMIKKVDVALG 476 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 + + + V+E + KF + ++ + D D K Sbjct: 477 TNLRQKYLSVVEIGGAYAHHFYKFIDFLELKTLFITDLDAVNSK 520 >UniRef50_Q07JA2 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07JA2_RHOP5 Length = 582 Score = 181 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 109/598 (18%), Positives = 188/598 (31%), Gaps = 79/598 (13%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLL---LSPESDLYHFE 56 M ++ + + FR +++ + VL+GEN GKS+++DAL LL LS D Y E Sbjct: 1 MHIDCLRLQRFRSCADVTVRFHRELTVLVGENNGGKSNIVDALRLLTLPLSGRRDRYP-E 59 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DD + H + F + L P +F G Sbjct: 60 DDDLRRGSTET-----HYALEGRFA------GLGDTMKGLLISAVPDPTADLAVF----G 104 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV--P 174 + ++ TLR + + + L+R + + LRDA+ + T Sbjct: 105 MRYQTRTLGTLRGRASSWAGKFETAEPESGSTDLIRHVYLPPLRDAKQALGTGSATRIAA 164 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA-RYRLM 233 + + T + FL + + I + + L Q A A + Sbjct: 165 LLQHFLQTGEEEGFLTHVQRTGAPHRVLTAINTDIETALGDLTRGARPQTASLAFTAEAL 224 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 A + + L + I G ++ + L L L L+E Sbjct: 225 TDVARDLRFRLADLGLPPEDIKSSGLGYANLLYMATVVVELAKAREADL-----TLFLVE 279 Query: 294 DPETRLHPIMLSVAWHLL----------------NLLPLQRIATTNSGELLSLTPVEHVC 337 +PE LHP + + L +Q I TT+S L + EH+ Sbjct: 280 EPEAHLHPQLQMLVLDFLLAQAKKSVTQEITPGQPEGRIQVIVTTHSPNLTAWISPEHLV 339 Query: 338 RLVRESS--------RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 + + + + GL +++S ++ R + LF LLVEG E Sbjct: 340 VIRSAQDSGTTPATMKTVSIPINGLGLDPRMIQKVSRYLDVTRSALLFGSRALLVEGIAE 399 Query: 390 TWVINELARQCGHHFDAE------GIKVIEFAQSGLKPLVKFA----RRMGI--EWHVLV 437 ++ +AR C + D G V P V I V+ Sbjct: 400 ALLMPVIARHCIFNTDPHALQRFRGAVVAAIDGVDFAPYVHILLHPCEGATIADRVVVVT 459 Query: 438 DGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQG----FSDVFHRMAQIP 493 D D + A+ +EH ++ G +VF + Sbjct: 460 DTDPHSPGNRKADLDKRAAEWGVADRLNVLTNAVTLEHELFSAGNGALLGEVFLLLHPQS 519 Query: 494 ENVPMNLRKIISKA---------IHRSS--KPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 ++ A + +S K D A ++A +VP L+ Sbjct: 520 AQRWTTDVDSVAVADRPAAFVQLLKTTSTRKGDFAQQLAERIVAGSPFTVPAYLRDAI 577 >UniRef50_C9M1X4 Putative uncharacterized protein n=1 Tax=Lactobacillus helveticus DSM 20075 RepID=C9M1X4_LACHE Length = 689 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 86/535 (16%), Positives = 171/535 (31%), Gaps = 66/535 (12%) Query: 2 ILERVEIVGFRGINRLSLM--LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 + VEI FR ++ E N+L+G N GK++++ A+ L+ + + +D Sbjct: 7 FISSVEITNFRTFKEKQIIRFTEGINILVGPNNIGKTTIISAIRLIFDKNK--FGLDIND 64 Query: 60 FWFPP--GDINGREHHLHIILTFRESLPG--------------RHRVRRYRPLEACWTPC 103 F ++ + + + ++S Y+ Sbjct: 65 FSKTETKEELKNCSPKITVSVNLQKSNKEGSDSDDLLAIRNWLTDIDNPYKAKITMQFQL 124 Query: 104 TDGYHRIFYRLEGESAEDGSV--MTLRSFLDKDGHPIDVEDI--NDQARHLVRLM--PVL 157 Y + + + + GSV FL K V + L R + Sbjct: 125 PTKYEKAYLDAVKDLDDIGSVWLELEDEFLPKYQRKYFVGESAQPLMDNSLSRFNCQYLP 184 Query: 158 RLRDARFMRRIRNGTVPNV-----------PNVEVTARQLDFLARELSSHPQNLSD---G 203 +RDA N + N N E+ ++ ++ +L+ Sbjct: 185 AIRDAEKRMNSGNKYLLNKLLNFFIDYDLKSNEELKKSDIEKKMQKRHKDFHDLAVKLLN 244 Query: 204 QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDII------NRMIDRP 257 + + + Y S+ GA A N+ + ++ N I+ Sbjct: 245 NLSPRFKEGKKEMLKYSSQTGATFDGEEPEFNSALNDHDILKEFSLVVKNGESNVPINLN 304 Query: 258 GGRSYRVILLGLFATLLQAKGTLRL---DKDARPLLLIEDPETRLHPIMLSVAWHLLN-- 312 G +I + L LQ + P LLIE+PE LHP M L Sbjct: 305 GLGYNNLIYISLVLAELQQSRDNSYFGDNSSVFPFLLIEEPEAHLHPDMQYDFLKFLQNN 364 Query: 313 -------LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS-TEDSRRI 364 Q I TT+S + + ++ + L + S V G + + +D + + Sbjct: 365 IKDGTTSETAKQVIITTHSPNITAAASLDDLIVLSKYKSGVKIGYPGETFIDNPKDKKFV 424 Query: 365 SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK 424 + R + F + +EG E +I + + + I +I + P ++ Sbjct: 425 ERFLDVTRSNLFFTNQLIFIEGLAEQMLIPQFMKADTSNIQNRHISIINLSGRYFIPFLR 484 Query: 425 FAR-------RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 + + L D D K + + + + + ++ ++ AL Sbjct: 485 MFDTNKNPNTAIYKQIACLTDLDPVQGKQNKSCPPIFQAEPDNKNPNIESIKALK 539 >UniRef50_Q6A9G0 Putative uncharacterized protein n=1 Tax=Propionibacterium acnes RepID=Q6A9G0_PROAC Length = 535 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 96/484 (19%), Positives = 172/484 (35%), Gaps = 43/484 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS-PESDLY-HFERD 58 M L R ++ R + L + + + VL+G N GKSSLL L LLL + LY D Sbjct: 1 MRLTRFKVENHRRLADLDIEVRDHLVLVGANDVGKSSLLRCLDLLLGASTAQLYSRISAD 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF P + + L + R+ RL Sbjct: 61 DFRAP-----DQPFVIEGTLADFTDVDKALFPDEIH------VDPNTNPSRLVIRLTATV 109 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 E+ +V+ RS + G + L + RD R R+ + + Sbjct: 110 DENETVVISRS-APEGGTGRQLSRDQVLGLGWKFLSATAQTRDLREDRKSALDDILQAVD 168 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLS-AMVQLLEHYFSEQGAGQARYRLMRRRA 237 + + +A+ L++ L ++ +GL ++ L ++ A + A Sbjct: 169 LGEEEAAFEAIAKSLTTT---LGSSKVLEGLRGSLADQLSKALPDKVAQDDLAFVPGAAA 225 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSY--RVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 N+ S L + + + L + L + G ++ I++P Sbjct: 226 DNDVLSDVRLQVSKQGVAPDLSEQSDGTRALYAIALYDLMSVGAN--------MVGIDEP 277 Query: 296 ETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSG 355 E LHP LL Q++ T+S +++ + + +VR + +G Sbjct: 278 EIHLHPSSQRSLARLLRSNANQKVIATHSADIVGAFDPDSIV-VVRGGGEAVQPK---AG 333 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFA 415 ++D R +R L AR ++VEG ++ ++ LA + D G+ +IE Sbjct: 334 FLSDDERMAVRLWVRDRLEPLTARRVVVVEGISDRIILEHLADLTDRNLDRLGVSLIEAG 393 Query: 416 QSG-LKPLVKFARRMGIEWHV--LVDGDEAGKKYAA--------TVRSLLNNDREAEREH 464 G + PL K G + L+D D RS+ + + E E+ Sbjct: 394 GCGDMGPLDKLFGANGFRVSMSQLIDADAEEALAKKLGVEVADLAGRSVWVSRSDLEDEY 453 Query: 465 LTAL 468 + AL Sbjct: 454 VRAL 457 >UniRef50_C7PQN7 Plasmid-related protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQN7_CHIPD Length = 674 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 85/515 (16%), Positives = 161/515 (31%), Gaps = 52/515 (10%) Query: 1 MILERVEIVGFR--GINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + + I GF+ G + L +N IG N+ GK+S L+AL L R Sbjct: 1 MKISTLTIKGFKSFGPQETRITLRKNLAAFIGLNSAGKTSALEALKRLFGSSLAEREIYR 60 Query: 58 DDFWFP----PGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 +DF +I RE + + + F E + D I R Sbjct: 61 EDFHIGKDENSDEITERELSIEVRIDFTE----EEQEAVPHFFSNMVVDDMDMDLYIRIR 116 Query: 114 LEGESAED-----GSVMTLRSFL----DKDGHPIDVEDINDQARHLVRLMPVLRLRDARF 164 LE + G + F+ P + + R L++++ V +R Sbjct: 117 LEATWKKSDMTPQGEIEIKNYFIKVPEGSTEQPDSKQPFPNHFRSLIQILYVPAIRRPAE 176 Query: 165 MRRIRNGT-----VPNVPNVEVTARQ----LDFLARELSSHPQ----NLSDGQIRQGLSA 211 + +GT + + + + ++ + P+ S Q Sbjct: 177 QLKYASGTILYRVLRKINWKDDFKEEFDAKIEEINEAFKGLPEFATVQTSITGFWQQFHK 236 Query: 212 MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFA 271 + + G+ + N + + ID G + L L Sbjct: 237 DERYRDTQIGFSGSDFETVLKRLEVSFNPTGTHKSFG-----IDELGEGYRSMFYLTLVC 291 Query: 272 TLLQAKGTLRLDKDAR---------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQR 318 +LL + + +D +L IE+PE + P +L +L + Q Sbjct: 292 SLLDVEEKMADTEDEESIGVNRPLLTILAIEEPENHIAPQLLGRVIKILKTIAEKENSQV 351 Query: 319 IATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFA 378 + ++++ ++ E + + + ++ + N P FA Sbjct: 352 VLSSHTPAIIKRLDPESILHFRITENYETEVNKIKLPVKKSEAYKYVKEAVHNYPEIYFA 411 Query: 379 RCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVD 438 R ++ EG++E + N L FD I + + K + I L+D Sbjct: 412 RLVVIGEGDSEAVIFNRLMEVMNVDFDDNIITFAPLGHRFVNHIWKLLDALKIPHITLLD 471 Query: 439 GDEAGKKYA-ATVRSLLNNDREAEREHLTALPALD 472 D + V+ + E E L D Sbjct: 472 LDREREGGGWGRVKYAIEQLLEVNVEKKDLLELKD 506 >UniRef50_UPI0001746ACF ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746ACF Length = 665 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 87/527 (16%), Positives = 169/527 (32%), Gaps = 84/527 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQ---NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M LE +E+ FR + RLS+ L + +L+G N GK+S++DAL L SD Sbjct: 1 MRLETIEVRNFRLLRRLSIDLTKEKTTTILVGPNNSGKTSVMDALRLFAGVGSDALRITF 60 Query: 58 DDFWF---------------------PPGDINGREHHLHIILTFRESLPGRHRVRRYRPL 96 D + + + LTF V R L Sbjct: 61 HDLSQLRHRNLRWIETKLSRSKDAEEKIAVLKRFSPRMRLDLTFTYDESPADLVAATRLL 120 Query: 97 EACWTPCTDGYHRIFYRLEGESA--------------------EDGSVMTLRSFL--DKD 134 RI Y L+ + R+F + Sbjct: 121 MDLNPSTNKVRLRIEYALDNAKKLLDDFDNRQRKAQTLCEFLRDSFREYFKRTFFKISLN 180 Query: 135 GHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEV-------TARQLD 187 G +++ + + L+R+ V R R+ + + + A Sbjct: 181 GQEVELLEESGLLNTLLRIDIVPAQRHVDDDDNSRSAKLSKLLHDHYERYYKVDNAAGYQ 240 Query: 188 FLARELSSHPQNLSD------GQIRQGLSAMVQ---------LLEHYFSEQGAGQARYRL 232 L ++ +L+ G++ + L + + S + + R+ Sbjct: 241 ALENAVTESASDLTVKYSLAFGRLTKRLKSFGYPSGQTAPDLRVRAELSTETIYRDNARI 300 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 ++ + + + G ++ I+L L + A L +K ++ + Sbjct: 301 FYASEHAGKQGLKEKFELPEKYNGLGFKNLIYIVLQL-ESFRAAIDALTGEKPRVHIIAV 359 Query: 293 EDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 E+PE LHP M +V ++ + Q + +T+S +++ + E + R Sbjct: 360 EEPEAHLHPQMQTVFISEISKVLENDGGSTAQVLLSTHSSHMIAHSGFEPIRYFRRIGRE 419 Query: 346 VAAWRLGPSGLSTEDSR---RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 V L L +DS + +IR FA + VEG+ E ++ + + Sbjct: 420 VVIRDLSKLPLDHDDSDLLGFLRRYIRLTHCDLFFADKAIFVEGQVERLLLPMMIEELAK 479 Query: 403 -----HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 + ++ I + E +GI ++ D D Sbjct: 480 EEGCENLASQYISISEVGGGHAHKFKPIIDFLGIPTLIITDLDSVDG 526 >UniRef50_Q1ZEF5 NADH-ubiquinone oxidoreductase (Fragment) n=2 Tax=Gammaproteobacteria RepID=Q1ZEF5_9GAMM Length = 377 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 14/249 (5%) Query: 260 RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRI 319 +I L L +A L+IE+PE +H + + N Q Sbjct: 5 GGANLIFLALKLYEYEAIRDNEAHITH--FLMIEEPEAHIHNHIQKTLFENFNFKNTQVF 62 Query: 320 ATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFAR 379 +T+S ++ S + + + L R+ S+ + SGL +++ I ++ R LFA+ Sbjct: 63 VSTHSTQISSASKISSMNILARKESKTEVY-FPASGLDEPNAQCIERYLDAVRSDILFAK 121 Query: 380 CWLLVEGETETWVINELARQ-CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE--WHVL 436 +LVEG+ E +I L R+ G D GI +++ + + + I+ +L Sbjct: 122 SVILVEGDAELILIPALVRETLGVSLDEMGISLVKMDGTVFIHISDLFHKTRIKNYCSIL 181 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFH-------RM 489 D D + + + E AL M ++ + + F+ + Sbjct: 182 TDLDASFITDEDFASDKYVKSQI-DAEKSGALRKAKMNEYIKDNEYVEAFYAENTFETEL 240 Query: 490 AQIPENVPM 498 + PENV + Sbjct: 241 VRYPENVQL 249 >UniRef50_B9JNX5 Putative uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JNX5_AGRRK Length = 598 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 88/489 (17%), Positives = 167/489 (34%), Gaps = 51/489 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + RV I FRGI + + VL+G+N GKS++ +A+ L + + + Sbjct: 1 MRIVRVHIENFRGIKLADIYFDGTTVLLGDNNTGKSTVFEAIELAIGADRLARTQAIDEH 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY----------- 107 DF+ + I++ + ++R W Sbjct: 61 DFYGGDYRAGENQVPKIIVVEVVIADLDEQHCTKFRNNLEFWRTAARSLLGAGVAGGAAQ 120 Query: 108 ----HRIFYRLEGESAEDGSVMTLRSFLD----KDGHPIDVEDINDQARHLVRLMPVLRL 159 + R EG + T +++ +DG PI D+ R L + L Sbjct: 121 AGTEPAVRVRFEGAYDSENDEFTAKTWFAVPRQEDGTPISECRSGDK-REFGFLH-LRAL 178 Query: 160 RDARFMRRIRNGTVPNV--PNVEVTARQLDFLARELSSHP-QNLSDGQIRQGLSAMVQLL 216 R + G++ +V EV R + L L D + + L+A+ + Sbjct: 179 RTGNRALSMERGSLLDVILKTYEVRTRMWEGLLGRLRGLDVVGAEDAEFGRILTAIRDAM 238 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQRSWRYL-----DIINRMIDRPGGRSYRVILLGLFA 271 + A R+ + +R + G + ++L + Sbjct: 239 REIVPGEWADAPHLRVSELTREDLRRVLKSFLATGVPGYAAPFQHQGSGTINALVLAMLG 298 Query: 272 TLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLT 331 + Q ++ R + +E+PE L P + + L Q + T++S ++ Sbjct: 299 LIAQ-------RRNGRVIFAMEEPELSLPPHVQKRVVDKVRELAAQALFTSHSPYVIEQF 351 Query: 332 PVEHVCRLVRESSR--VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 E + L R+++ A + P L + R +L AR ++VEG+TE Sbjct: 352 TPEQMAVLTRDNAGLLTAMSVVLPDSL---KLKIFRDGFRTRFCEALLARRVVVVEGKTE 408 Query: 390 TWVINELARQCG-------HHFDAEG-IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 + +AR+ DA G + Q+ + P F R +G + D + Sbjct: 409 LVAYSAVARRAAELAPAQYKRLDALGWVPFDAGGQTAVAPFASFFRGLGKTVATIFDQQQ 468 Query: 442 AGKKYAATV 450 + A Sbjct: 469 PDARAAIVA 477 >UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J729_9BACL Length = 699 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 102/609 (16%), Positives = 189/609 (31%), Gaps = 95/609 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++I FR + + + ++ N +IG N GK++ L A+ L++ + Sbjct: 1 MHISSLKIRNFRNFQKANFVFKEGVNTIIGANGSGKTNALFAIRLIIDDSLPRSSTNLLD 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF N R H + I L F + T G +++R + E Sbjct: 61 TDFNRSLT--NWRGHWIVISLHFDNLSNDDSSQALV--FQGTHTTDNRGSLNLYFRPKYE 116 Query: 118 SAE-----DGSVMTLRSFLD-KDGHPIDVEDINDQARHLVRL-----------------M 154 + + F+D I+ + R L Sbjct: 117 VRKRLFELSQELAEEEQFVDYLSSLKINQYESVLYGRGLADFSKDEVYKTLVGDFNNYTF 176 Query: 155 PVLRLRDARFMRRIRNGTVPNVPNVEVTARQL------------DFLARELSSHPQNLSD 202 P D+ + N V A+ L L R LS+ N S Sbjct: 177 PNPDEEDSSLLGTPANQYVFKNDFACTYAKALRDVIGDLKNPRTSPLLRLLSNLNINESS 236 Query: 203 GQ-IRQGLSAMVQLLE------------HYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 + I + + + G + ++ L Sbjct: 237 TETISSTIKDLNWHITNLPEIRELAAGVSQSLHNTVGHTYAPRIEINSNLSDDFRHTLKA 296 Query: 250 IN----RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK------DARPLLLIEDPETRL 299 +N + + LG L A ++ A LLIE+PE L Sbjct: 297 LNIKAGELSGEDYIGDLYEMSLGGANLLYLALKLEEYNRLDHEQNKAAHFLLIEEPEAHL 356 Query: 300 HPIMLSVAWH-LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 H + + N Q + TT+S + S ++ V + E++ + SGL Sbjct: 357 HNHIQKTLFQKYHNHENTQILLTTHSSHISSSCSLDSVNIVYLENNCCEVSQPN-SGLDE 415 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIEFAQS 417 D RRI ++ R + LFA+ +LVEG+ E +I E+ + G D G+ +I + Sbjct: 416 NDVRRIERYLDATRSTLLFAKSVILVEGDAELILIPEMVKMAFGITLDEIGVSLINVGST 475 Query: 418 GLKPLVKFARRMGI--EWHVLVDGD--------------------EAGKKYAATVRSLLN 455 + + I ++ D D + ++ + R L+ Sbjct: 476 QFENIAVLFSEERIRRRCAIVTDNDISIIPLGDEMYPDKEFQKKCKQSEESGKSRRQKLD 535 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ-----IPENVPMNLRKIISKAIHR 510 + E + +QG ++ + + + ++ KI + I Sbjct: 536 DFSRDNSYISVYYGTNTFEVELIKQGNKNILENVIRKDIYKRQSDQNSSVEKINNSDISI 595 Query: 511 SSKPDLAIE 519 K L + Sbjct: 596 YGKEILRLA 604 >UniRef50_B4BS89 SMC protein-like protein n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BS89_9BACI Length = 508 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 94/511 (18%), Positives = 180/511 (35%), Gaps = 79/511 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYH-FERD 58 M + + I FR I + + ++ N+LIG+N GKS+++ AL LLL + + Sbjct: 1 MFVSDLYIKNFRSIKDIHVSFKEGKNILIGKNNAGKSNIIKALDLLLGEKLPSKSSLDIK 60 Query: 59 DFWFPPGDINGREH-----HLHIILTFRESLPGRHRVRRYRPLE------ACWTPCTDGY 107 DF+ +I G + + I + +P + + + + W + Sbjct: 61 DFYAVEREIKGNKKIDYANEMFIAVKLSGKVPDSNTFQEIKIIRQERFGIEYWAKFENDK 120 Query: 108 HRIFYRLEGESAEDGSVMTLRSF----------------LDKDGHPIDVEDINDQARHLV 151 I +L+ + E L F + +D + Q H + Sbjct: 121 VIIHDQLKMDYDEFDPKRDLDKFEGTDLCYWIRDKEEVIFYIYANRYGSDDEDMQFIHGM 180 Query: 152 -----------RLMPVL--RLRDARFMRRIRNGTVPNVPNVEVTA-RQLDFLARELSSHP 197 R P + +LRDA I +++T L + L + Sbjct: 181 LVKDKKNEKYFRCFPTISKKLRDAFITSSILPAFRDPSNQLKITNWTWYGKLLKSLWDNK 240 Query: 198 QNLSDGQIRQGLSAMVQLLEHYFSEQ------------GAGQARYRLMRRRASN--EQRS 243 D +I++ + +L + F + +R++ + + S Sbjct: 241 NKEVDEEIKKQSEMIKKLTDKVFEDTANDIKSKLKELINYSYISFRMLPNEKDDIYKNVS 300 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 D I + G +++GLF+ LL +E+PE LHP Sbjct: 301 IYINDGIESQLSEKGSGLQSALIIGLFSYYCSKLHK------CNSLLAVEEPELFLHPHA 354 Query: 304 LSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESS--RVAAWRLGPS 354 + + L+ Q I TT+S E + T +E++ + + + L + Sbjct: 355 RRMLSNKLDEFVSLDDNYKNQVIITTHSQEFIRNTEIENIIVVRKPEGTSETKTFSLTNN 414 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA----RQCGHHFDAEGIK 410 + ++ ++I + FA +LVEG E ++I +A Q G D I Sbjct: 415 ERTIQEIQKIKQLLWSKNSELFFADKVILVEG-GEEYIIPLIADFIFEQTGI-LDKRNIS 472 Query: 411 VIEFAQSG-LKPLVKFARRMGIEWHVLVDGD 440 V++ + R +GI++ V+ D D Sbjct: 473 VVKVGGKSQFGIYMALLRDLGIDYFVIADFD 503 >UniRef50_A3XJ07 Putative uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XJ07_9FLAO Length = 626 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 81/507 (15%), Positives = 167/507 (32%), Gaps = 69/507 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER--- 57 M + ++EI+ +R ++ L+ +IGEN GKS+LLD+L L+ S E + Sbjct: 1 MYVSQLEILNYRNFKNFTVQLKPVTQIIGENNIGKSNLLDSLGLIFSQEVSFFKRRMLDI 60 Query: 58 DDF---------------WFPPGDINGREHHLHIILTF----RESLPGRHRVR------- 91 DF P +I+ + + L +E++ Sbjct: 61 SDFNYETILELKKAILDTSIEPKNISYPKIVIKATLKDWDLKQEAVITDWMSNSDFTEAT 120 Query: 92 ---RYRPLEACWTPCTDGYHRIFYR--------LEGESAEDGSVMTLRSF-LDKDGHPID 139 + P+ + R F + E + ++ L +F + K + I Sbjct: 121 LTYTFAPISSFDKIEEITLQRQFLQDYEKEIGPEEFKKIPQSEILILINFPISKYHYRIH 180 Query: 140 VEDIND-------QARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARE 192 + N+ + L+ LR + NG + V N D R Sbjct: 181 GGNQNESLANAYHLNQLKFELLDALRDAKSELSASRNNGLLFRVLNANEETDYQDLKKRL 240 Query: 193 L---SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 + + QN++ I+ +S + + + + ++ + Sbjct: 241 VGLQRAIEQNVAISGIKNRISEQLDKISLSTETSNNVVDLIFSLPNVSDLLRKLSLIYND 300 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 I+R G ++ + L + ++ R ++ +E+PE LH + + Sbjct: 301 NPIKIERNGTGRNNLLFISLILSFIE--DPERAQSTFFRIVGLEEPEAHLHANLQNHLAS 358 Query: 310 LLNLL----------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL----GPSG 355 L L +Q I T++S + + ++ L ++ V A + G + Sbjct: 359 NLEGLIKKEDGTYRKDIQLILTSHSNHITTKIDFDNTVVLHYKNGNVQAHYILDGFGTTA 418 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ-CGHHFDAEGIKVIEF 414 + ++ + ++R LVEG +E + + G D V+ Sbjct: 419 EEKRQVNYLKKYLDSENVNLFYSRRLALVEGISEKLLFPLFYKIQTGETIDQSATAVVNV 478 Query: 415 AQSGLKPLVKFA-RRMGIEWHVLVDGD 440 K ++ + VL D D Sbjct: 479 NGLAFKNFLQIIVNGFHTKCLVLTDSD 505 >UniRef50_C3WB54 ATP-dependent OLD family endonuclease n=3 Tax=Fusobacterium RepID=C3WB54_FUSMR Length = 448 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 106/281 (37%), Gaps = 21/281 (7%) Query: 245 RYLDIINRMIDRPGGRS-YRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 R +D N + R YR ++ +F +L Q L+L E+PE LHP Sbjct: 164 RIIDTFNELQSEYTSRGLYRNLIFEIFCSLAQYSKKNEHSILENTLILFEEPELYLHPQK 223 Query: 304 LSVAWH---LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESS-RVAAWRLGPSGLSTE 359 + +L L Q +T+S ++L + +C + +E A++ S + Sbjct: 224 QKELFSNICILTKLGNQIYVSTHSNNFINLHMYKSICIVRKEEKIGTKAFQFKGYLFSGD 283 Query: 360 DSRRISFHIRFN--RPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 + + + + N R FA+ +LVEG+T+ V+ L+++ G + ++E Sbjct: 284 EIKNFNMNYWINPDRSEIFFAKKVILVEGQTDKIVLGYLSKRLGIY--KYDYSILECGSK 341 Query: 418 GLKP-LVKFARRMGIEWHVLVDGD-----------EAGKKYAATVRSLLNNDREAEREHL 465 L P +K I + + D D + +K S+ + Sbjct: 342 SLIPQFIKLLNVFKIPYVAVYDRDNHLWRTPEEIENSNQKNKIIQNSVKKDIGNWLEFEN 401 Query: 466 TALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISK 506 + E+ + + F+ + + + + +K+ K Sbjct: 402 DIEEEIYEENRERKNYKNKPFYALKTVTNSEYIIPKKLEKK 442 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ ++I ++ + + E + IG++ GKSS++ A+ L +F D Sbjct: 1 MYLKELKIKNWQCVENTEVKFENLMLFIGQSNSGKSSIMSAIMFFLG----YRNFRVRD 55 >UniRef50_A7WYC4 Putative uncharacterized protein n=6 Tax=Bacilli RepID=A7WYC4_STAA1 Length = 729 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 100/618 (16%), Positives = 203/618 (32%), Gaps = 101/618 (16%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPES--DLYHFER 57 M + ++I FR + + N +IGEN GK++ L AL +LL + Sbjct: 1 MFISTLQIRNFRNYESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLKE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRP-----------LEACWTPCTDG 106 DF+ G NG + H II E + LE + G Sbjct: 61 SDFF--HGIQNGWQGHWIIISATFEGISEEEFDNEICASISLNSESQTILEELISNADKG 118 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDG-----HPIDVEDIN----------------- 144 I + A + + + LD + I + D Sbjct: 119 VGSISLFIRPNKAIRKQLFDISTELDSHQFNEFRNSIRLSDYEFYYTSKSNLNFCINENY 178 Query: 145 -DQARHL----------------------------VRLMPVLRLRD-ARFMRRIRNGTVP 174 L + ++ V LRD R M+ RN Sbjct: 179 DKLVGRLNDNIASNPEEDDEALLGSRIDMSDIFKHISVVYVDALRDVLREMKNNRNPVKR 238 Query: 175 NVPNVE--VTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 + +E +++ ++ L + + + S +IR+ + + L G+ + Sbjct: 239 IMETIESKISSDNVESLKTIIQQLNETITSVPEIRKIGENINRQLNSI---IGSVYSPNL 295 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL 291 L+ S++ S + + L ++ L + ++ ++L Sbjct: 296 LLSSTMSDDMGSLAKFLSMKPEQNIDLDLLGLGHLNMIYLALKIVEFEACRSRELLNIML 355 Query: 292 IEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW 349 IE+PE +H + + LNL Q + TT+S L ++ + + L + + Sbjct: 356 IEEPEAHIHHHIQKTLFEGLNLQKNYTQILMTTHSVHLAEVSEISRMNVLKSFNGKSIVM 415 Query: 350 --RLGPSGLSTEDSRR--------ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 + + E ++ + ++ R LF++ +LVEG+ E +I ++ ++ Sbjct: 416 NPANNLNSFAKEKLKKNNLNLINAVERYLDVKRNGLLFSKGVILVEGDAEEILIPQIVKK 475 Query: 400 C-GHHFDAEGIKVIEFAQSGLKPLVKFARRMGI--EWHVLVDGDEAGKK-----YAATVR 451 G + D GI +I + + + I + ++ D DE Y +T + Sbjct: 476 LFGINLDELGIGLINVGSTSFEYIASLFDDDRIQRKCAIVTDLDEQAIPSEHRLYKSTAQ 535 Query: 452 SLLNNDRE------AEREHLTA-LPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 +E E + E ++ ++ I ++ + + I Sbjct: 536 EKGQARKEKLSSLFNENNWVNCFYANTTFEIEFLDVNKENILTYVSPIIDDAFKDKKTIT 595 Query: 505 SKAIHRSSKPDLAIEVAM 522 + S+ L +AM Sbjct: 596 AYKEEIQSEQYLERNLAM 613 >UniRef50_Q5NYH6 Putative uncharacterized protein n=3 Tax=Betaproteobacteria RepID=Q5NYH6_AZOSE Length = 608 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 85/477 (17%), Positives = 157/477 (32%), Gaps = 48/477 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY--HFERD 58 M + R+ I FRGI L + +LIG N GKS++ +AL L+L P+ E Sbjct: 1 MRVSRLSIENFRGIANAVLHFSGHTLLIGGNNVGKSTICEALDLVLGPDRLNRTPPVEEF 60 Query: 59 DFW-------FPPGDINGREHHLHIILTF-----RESLPGRHRVRRYRPLEACWTPCTDG 106 DF + R + + LT + R L D Sbjct: 61 DFRNANYLADDGETIVPLRIEAILVDLTDDIKTLCAANLEFWHTSEKRLLTEGEIAAADD 120 Query: 107 YH-RIFYRL----EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD 161 + RL + ED V + + + I + + + + + +R Sbjct: 121 PQVELCLRLVTVGRYDIDEDQFVARTIYGRTNEEPDEEPKSIPTRVKRAIGFLYLRTIRT 180 Query: 162 ARFMRRIRNGT-VPNVPNVEVTARQLDFLAR---ELSSHPQNLSDGQIRQGLSAMVQLLE 217 + GT + N+ ++ + + R + + P + ++ L + L Sbjct: 181 GSRALSLERGTLLDNILRMKEARKGMWESIRKRLAVLNPPIDADATELGPVLDEIEARLA 240 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYL------DIINRMIDRPGGRSYRVILLGLFA 271 Y + G G++ + + R + G + ++L L Sbjct: 241 EYIAPSGEGRSTRLFVSQLTREHLRKTIAFFLTMGQGEAAVPFQQSGTGTLNTLVLALLT 300 Query: 272 TLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLT 331 + K + +E+PE L P + L Q T++S ++ Sbjct: 301 FIADLKKDNV-------IFAMEEPEIALPPHTQRRIANYLLEETSQCFVTSHSPYVIERF 353 Query: 332 PVEHVCRLVRE--SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 E + +L R P+G+ ++ R + R ++ R ++ EG TE Sbjct: 354 EPEGIVKLDRNDQGELSGVVIKLPAGMKAKNYR---QNFRRAIAEAMLGRGVIVGEGITE 410 Query: 390 TWVINELARQCG------HHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDG 439 + +A + D GI VI G L+ L F + +GI D Sbjct: 411 QDALLLVAHKLEEHNLDLFPLDVAGISVINADGDGNLEKLGAFFKEIGIPAFAFFDR 467 >UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Gammaproteobacteria RepID=A4WDI6_ENT38 Length = 582 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 87/496 (17%), Positives = 170/496 (34%), Gaps = 71/496 (14%) Query: 1 MILERVEIVGFR----GINRLSLMLEQNNVLI--GENAWGKSSLLDALTLLLSPESDLYH 54 M + + FR GI+ ++ + N L G N GKS+ L A S E Sbjct: 1 MKISFFGVNNFRTISGGIDNNKIIFKDTNTLFIYGANNAGKSTFLKAYMFFYSNEK---P 57 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 D F + E + + +E + + ++ + + R+ Sbjct: 58 MIDDFFKRDGNNSIEFELEVQLDELDKERIEAKAPKQKE-SYKKYLNND-------YIRI 109 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL-----------RLRDAR 163 + +DG+ + +++ D D + ++ V L V + Sbjct: 110 KKVWRKDGAKIEDKNYTY-DYSKGDNGEYDEVGYATVGLHTVFQSCLPKPVFIKAMPTEE 168 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ---NLSDGQIRQGLSAMVQLLEHYF 220 ++I N + + + L+ L + + D ++ + + YF Sbjct: 169 EAKKILNEILKMMAESTLKTSDLEELKAAQDKIKELQDKMYDPEL---IETYQSSVNGYF 225 Query: 221 SEQG----------------AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRV 264 ++ R + + + I G + R Sbjct: 226 NKIFGDTAICFKDQKDRVIWTENKLGRDFEIEFMKKNSQGDFDENIPSSYSSVGHGTIRT 285 Query: 265 ILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL-----NLLPLQRI 319 + L A+ R ++L E+PE L+P M+ L+ LP Q + Sbjct: 286 AIFTLLLMRDVAERFERRQGRKDYMVLFEEPELFLYPRMVKELRELIYQVSTEDLPYQVL 345 Query: 320 ATTNSGELLSLT-PVEHVCRLVRESSRVAAWRLG------PSGLSTEDSRRISFH--IRF 370 ++S ++ L+ P + RLV SS ++++ G++T D + + +RF Sbjct: 346 CASHSSSMIDLSKPKSSIIRLVNNSSGTKSYQINDQFLKDAKGIATNDELKQEMYEVLRF 405 Query: 371 NR--PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV-KFAR 427 N S +A LL+EG TE + ++ + + I V+ P K Sbjct: 406 NPYICESFYADEVLLIEGPTEEIISRAFLQEVPSN---KTIFVLNCGTVNNIPFYQKIFS 462 Query: 428 RMGIEWHVLVDGDEAG 443 R I++HV+ D D+AG Sbjct: 463 RFNIKYHVICDTDKAG 478 >UniRef50_B0A6Q1 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0A6Q1_9CLOT Length = 581 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 80/471 (16%), Positives = 183/471 (38%), Gaps = 28/471 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 MIL++++I FR N +S+ L+ NV+ G N GK++ L AL LL + F D+ Sbjct: 1 MILKKLDINNFRNFNSISIELDNKNVVFGMNDVGKTNFLYALRFLLDKDIRKNGFMPTDY 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + + + + + +D + R+EGE E Sbjct: 61 HR---HNTKEKIQITLTVDLSDFYESEDTKKFVSETRDGGVRTSDRGDIFYIRVEGEYNE 117 Query: 121 D---GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR--FMRRIRNGTVPN 175 + G + +D + + ++ +L+ + L D + F + R N Sbjct: 118 EEVFGEPIMKWGDNLEDLKDMPFRGTSYSIDNIFKLVYINPLVDLQKVFEKNRRYIFDEN 177 Query: 176 VPNVEVTA--RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + E +++ L +E++ N+S I + + +E+ + + + + Sbjct: 178 SSDKEDKKLIDKINNLTKEVNDQIGNMSI--INNFQKDITDEYKKLNNEELSIEIKSEMA 235 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 ++ + + + G +++ LF + + K ++ + L+E Sbjct: 236 INGFFSDLMPYIKRENDDNYYPTSGDGRRKILSYSLFNYINKKKYDNKI-----VIYLLE 290 Query: 294 DPETRLHPIMLSVAWHLLNLLPLQR--IATTNSGELLSLTPVEHVCRLVRESS---RVAA 348 +PE LH M L + +T+S ++L + R+ + Sbjct: 291 EPENNLHRSMQISLSKQLFDDDTYKYLFVSTHSSQILYEMDKAMLIRIHSKEKIECNSYL 350 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 +++ P+ + D ++++ ++LF LL+EG +E + ++ + ++ +G Sbjct: 351 YKIEPNYKT--DKKKLNR----EFSNALFYENVLLIEGPSERILFEKILDEVNPDYEQQG 404 Query: 409 IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 +++ + + K ++ + + I+ V D D GKK LL +R Sbjct: 405 GYILQVSGTYFKTYIRALKGLDIKVIVKTDNDLRGKKGNIQEYELLGINRC 455 >UniRef50_B1I298 ATP-dependent endonuclease, OLD family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I298_DESAP Length = 663 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 114/669 (17%), Positives = 207/669 (30%), Gaps = 130/669 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M++ V + FR I SL ++ L+G N GKSSLL AL L P + + +DF Sbjct: 1 MLISAVHVKNFRSILDDSLPCDRLTALVGRNGAGKSSLLRALELFYDPSAKV---TTEDF 57 Query: 61 WFPPGDINGREHHLHIILT--------FRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 + + ++ + + F + + R + YH + Sbjct: 58 Y---AEDTSQDIEIAVTFAELSTEEQDFFSAYIDNGTLTVVRVFSLAPGRKSGTYHGMRL 114 Query: 113 --------RLEGESAE-DGSVMTLRSFLDKDGHPIDVEDINDQ--ARHLVRLMP--VLRL 159 R G E LRS P + P +R+ Sbjct: 115 QNPDFAEVRTAGGRREITNKYNELRSTEKYSSLPTVRSADEALSKLQEWESANPNACVRM 174 Query: 160 RD---------------ARFMRRIRNGTVPNVPNVEVTARQ------LDFLARELSSHPQ 198 RD R R IR V + + R +D + R + + Sbjct: 175 RDDGQFFGFTEVGQGYLGRHTRFIRIPAVRDASEDAMERRGSCVTEIMDLVVRSALARRK 234 Query: 199 NL----SDGQIR-------------QGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 ++ + Q + GL A + ++ + R+ Sbjct: 235 DIATFKEETQAKYRDILDPAKLSELTGLQAQLSKTLKQYAPEADVSLRWAEFADINIPMP 294 Query: 242 RSWRYL--DIINRMIDRPGGRSYRVILLGLFATLLQAKG--------------TLRLDKD 285 + L D + R G R +L + L+ A+ + ++ Sbjct: 295 EAQVKLVEDGYESSVLRTGHGLQRAFILTMLQHLVAAREMKKTMEEGFDSKEQSSEAEEP 354 Query: 286 ARP--LLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELLSLTPV 333 P +L IE+PE HP +L L Q I +T+S + L Sbjct: 355 YLPGLVLAIEEPELYQHPSRQRHLASVLVKLATGTIPGVAKKTQVIYSTHSPLFVGLDRF 414 Query: 334 EHVCRLVRE------SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPS------------- 374 + + L ++ + ++ E Sbjct: 415 DQIRLLRKKDVGAGKPKVTEVVKANLEAVAEELWDACGRQGVKYTSETLRPRLQAIMTPW 474 Query: 375 ---SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARRMG 430 FA +LVEGE + I +AR G+ FD+ I VI L + RR+ Sbjct: 475 VNEGFFADVVVLVEGEDDRAAILGVARAMGYDFDSANISVIPCMGKPNLDRPLVIFRRLR 534 Query: 431 IEWHVLVDGDEAGKKYAATVRSLL-----NNDREAER--EHLTALPALDMEHFMYRQGFS 483 I +V+ D D + L + + E A + +E + + Sbjct: 535 IPVYVIWDSDYGERDPKPESNRYLLRLLGQAEEDWPNIVEDWYACFEVKLEATIAEEIGQ 594 Query: 484 DVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 ++F+++ +N I K H P + ++ +A G +S+ LK + ++ Sbjct: 595 ELFNQLLSQAQN-----ELGIPKKEHALKNPVVLQQIVEKAAAEGKESI--SLKGIVQKI 647 Query: 544 LWLARGRAD 552 + L + + Sbjct: 648 IALKSRQEE 656 >UniRef50_A1S4L2 ATP-dependent endonuclease of the OLD family n=1 Tax=Shewanella amazonensis SB2B RepID=A1S4L2_SHEAM Length = 603 Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 81/561 (14%), Positives = 176/561 (31%), Gaps = 83/561 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L +++I FR I+R+ L LIG N GKS++L A+ L+ R+ Sbjct: 3 MELSKIKISNFRSIDRIEFTLRNYTSLIGPNNAGKSTVLSAIDCFLNQIKPQLSDWRNHN 62 Query: 61 WFPPGDIN-------------------GREHHLHIILTFRESLPGRHRVRRYRPLEAC-- 99 + P I + + +H+ L + Y Sbjct: 63 YDEPVIIECLFTNLQPWESTCPGVAGIVQNNEIHLRLVASADVANSSVNVEYEAYIREEQ 122 Query: 100 ---WTPCTDGYHRIFYRLEGESAEDG-------SVMTLRSFLDKDGHPIDVEDINDQARH 149 W+ + + E +G + ++ L ++ + Sbjct: 123 IEGWSSGWRDLSQTIKEIASERGFNGTSWKTVSNREVIKQHLRENHPELIAAGDYIWTSE 182 Query: 150 LVRLMPVLRLR---------------------DARFMRRIRNGTVPNVPNVEV---TARQ 185 + + P L+ + F + + + +P V E Sbjct: 183 GISIKPALQQALPKCVVIPAVSKIGDDLKTTGKSPFNQLLSSVVMPAVARSEEFRGLQSA 242 Query: 186 LDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWR 245 + L ++ ++ +IR+ + + L + + ++ Sbjct: 243 IQLLTDKMRGQSED-EFEEIRRITDLLTERLSSILDAEVIMSLNSPDFEKFINSGATLLV 301 Query: 246 YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLS 305 D G + R + L T+ + + ++ LLL E+PE +HP ++ Sbjct: 302 NDGHTTSP-DNQGSGAQRALTFALLETITKMEIAQEGEQVKSTLLLFEEPELYIHPHLMR 360 Query: 306 VAWHLLNLLP----LQRIATTNSGELLSLT-PVEHVCRLVRE--SSRVAAWRLGPSGLS- 357 +L + Q I+TT+S L+ + + + R S +L S Sbjct: 361 KLKSILETIGASNHWQVISTTHSPFLIDVASDPMSLVLVSRNGRGSPTELKQLQSDPFSN 420 Query: 358 ----TEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINELARQCG-HHFDAEGIK 410 + + + + F+ + FA +LVEG+TE + D ++ Sbjct: 421 VENGDRERQALRATLDFHPTVCEAFFASRVVLVEGDTEVAIFKRAYEILDALEMDTSNVE 480 Query: 411 ---VIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 ++ P + + + + ++ D D G+ + + A + + Sbjct: 481 NTTIVSCGGKWTIPAIARLLANFEVPFRIVHDLDRKGRTDDELQVATGIDPYRANAKIDS 540 Query: 467 ALPALD-------MEHFMYRQ 480 A P +D +E ++ Sbjct: 541 AAPNVDKFLVEDTLEDLLWPN 561 >UniRef50_C6PLM4 SMC domain protein n=2 Tax=Thermoanaerobacter RepID=C6PLM4_9THEO Length = 658 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 92/532 (17%), Positives = 169/532 (31%), Gaps = 101/532 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLY----HF 55 M L RV I FR I + + + N+++G+N GKS+++ A+ L+L + Y + Sbjct: 1 MYLHRVVIKNFRSIEYVDITFAKGKNIIVGKNNCGKSNIIKAIDLVLGESNPAYVKNENI 60 Query: 56 ERDDFWFPPGDINGREHHLHI--ILTFRESLPGRHRVRRYRPLEAC-------------- 99 DF+ +E + I + E Y + C Sbjct: 61 TEKDFFTYKIKDETKEEIVVTNDIFIYCELRRDEGEDIPYDMMLECSGFYKYSRSIDKDA 120 Query: 100 -------------------------------WTPCTDGYHRIF-YRLEGESAEDGSVMTL 127 IF + L+ EDG V Sbjct: 121 IKNCFENEFLINPDELRYEEKQYINPKKNIDQVVEEFENKYIFAFALKAYRNEDGDVKKE 180 Query: 128 RSFLDKDGHPIDV--EDINDQARHLVRLMPVLRLRD----------ARFMRRIRNGTVPN 175 F ++ + ++ + RD + + + +R+ T + Sbjct: 181 LRFFYREDENSNWTMAFSAPIRNEFLQSAIIPSFRDPMVQLRINQWSWYGKLLRHLTKNH 240 Query: 176 VPNVEVTAR--QLDFLARELSSH-PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 + E+ ++ +A E+ S Q +S+G L + E+ Sbjct: 241 NKDDELKKAFLRVKEIADEVFSDVKQKISNGSFNVAFPGTEILFQFSADEKPDIYKN--- 297 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 D +I G ++GLF+ + ++ + LL + Sbjct: 298 ---------VVIYIDDGYKSLITDKGSGIQSATIIGLFSYYINY-----VNTKSSALLCL 343 Query: 293 EDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLSLTPVE-HVCRLVRESSRVA 347 E+PE LHP LN Q I TT+S E L ++ + R A Sbjct: 344 EEPELYLHPHACRTINYKLDEFLNDGKNQVIITTHSPEFLKTIEPNMNIILARKNEGRTA 403 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDA 406 +L + N+ FA ++ EG + ++I +A + G+ + Sbjct: 404 IHQLNVKKFK-------DVLVDNNQNEVFFADKVIVCEGY-DNYIIKWIAEELYGNKLNE 455 Query: 407 EGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGD-EAGKKYAATVRSLLNN 456 E I VI + V ++GI+ +++ D D K VR + Sbjct: 456 ENISVISVGGKDNISKFVDLTLKLGIDTYIVADFDYFLRDKDEEKVRKYKDK 507 >UniRef50_A0K383 ATP-dependent endonuclease of the OLD family-like protein n=7 Tax=cellular organisms RepID=A0K383_BURCH Length = 689 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 87/539 (16%), Positives = 160/539 (29%), Gaps = 102/539 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQNN-VLIGENAWGKSSLLDALTLLLSPESDLYHFE--- 56 M L V+I FR ++ + L LE V++G N GK+SL + + LL+ S + E Sbjct: 1 MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFS 60 Query: 57 --------------RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 +D L + + + P + PL Sbjct: 61 SACYEGFRLAWEARSNDEHDDIVRALIPYIELRLTFQYDPNQP------QLGPLSPFVID 114 Query: 103 CTDGYHR----IFYRLEGESAED----------------GSVMTLRSFLDKDGHPIDVED 142 + Y L+ TLR + + + Sbjct: 115 LDPDCTEALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLRDRIPGNYATRIWAE 174 Query: 143 INDQARHLVRLMP-----------VLRLRDARFMRRIRNGTVPNVPNV-----------E 180 + A + +L+P + R + + + + Sbjct: 175 DPNDAGNQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADA 234 Query: 181 VTARQLDFLARELSSHPQNLSD---GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 + D L + + GQ++ + A+ Q +R+ Sbjct: 235 ADKQIADSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLL 294 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT--LLQAKGTLRLDKDARPLLLIEDP 295 SN + + + G R ++ L +A L+ IE+P Sbjct: 295 SNFTKVRYAGYSGVALPESYNGLGARNLIFILLQLAGFYKAYRAEATAPGIH-LIFIEEP 353 Query: 296 ETRLHPIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCR-LV 340 E LHP M V L P+Q + +T+S + + E + L Sbjct: 354 EAHLHPQMQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVANEAGFESIRYFLG 413 Query: 341 RESSR---------VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETW 391 R+ S + R G G+S D + + ++ R FA +LVEG +E Sbjct: 414 RDVSGAQPGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERL 473 Query: 392 VINEL------ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 ++ L A ++ + IE + K + + ++ D D K Sbjct: 474 LLPVLVGKLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEK 532 >UniRef50_Q2N9H1 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N9H1_ERYLH Length = 654 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 90/545 (16%), Positives = 157/545 (28%), Gaps = 113/545 (20%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LE V I FR I+ L + ++ LIG N GKS +L A+ S S + +DF Sbjct: 1 MRLETVYIKNFRAISELEINIDDVTTLIGSNGVGKSCVLKAIDKFFSKSSAV---TLEDF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGR--------------------------------H 88 + I L+F E Sbjct: 58 HDGNV-----SDPIEIGLSFTELQADELERYAARVHGGTLRIVRVFRSSSLGRENGRYFG 112 Query: 89 RVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDG---SVMTLRSFLDKDGHPIDVEDIND 145 R++ + T + Y E+ + + L + N Sbjct: 113 FAYRHQAFDEVRNLPTANDQKSAYNALTETGDFPGLTKCTRIADALTAMSEWEENNSDNC 172 Query: 146 QA------------------RHLVRLMPVLRLRDARFMRRIRNGTVPN------VPNVEV 181 + V + + +RDA V V + Sbjct: 173 VLAMDDGQFEGFANVARGGLQRFVSFVFIPAVRDASIDAVDSKKAVIGQLLELYVRTILQ 232 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHY---FSEQGAGQARYRLMRRRAS 238 +++ E+ ++L + L + LL F + + ++ + Sbjct: 233 AKKEIKEFQTEMDERYKDLVSPENIGELDELSGLLTSTLTNFYGESEVELNWKEVEPLPL 292 Query: 239 NEQRSWRYLDI--INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP-------- 288 + L ++ G R + + L A D Sbjct: 293 PLPSAETLLTEQGYKGPVEGKGHGLQRAFIFTILQHLALALHDTEQDSGEEESEDGPTSH 352 Query: 289 --LLLIEDPETRLHPIMLSVAWHLLNLLP----------LQRIATTNSGELLSLTPVEHV 336 +L IE+PE HP +L L +Q I ++S L+ E + Sbjct: 353 SIILAIEEPELYQHPTKQRHFAEVLRNLSDLDAHKGAQSVQLILCSHSPHFLATDRFEEI 412 Query: 337 CRLVR----ESSRVAAWRLGP--------SGLSTEDSRRISFHIRFNR--------PSSL 376 + R + + +G+S + + ++ R Sbjct: 413 RVIHRSLDEDEKSTSTVSQVSYQHVVDQLAGVSEDPEKHLNPEALKVRLHTLTPLVAEGF 472 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHV 435 FA +LVEG ++ + AR F+A GI +IE + L + R +GI V Sbjct: 473 FASKVVLVEGTSDVAALRAAARMSDKSFEASGIALIEVGGKTNLDKPLIIFRSLGIPIFV 532 Query: 436 LVDGD 440 L D D Sbjct: 533 LFDSD 537 >UniRef50_D0SCV0 ATP-dependent OLD family endonuclease n=2 Tax=Acinetobacter RepID=D0SCV0_ACIJO Length = 693 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 77/530 (14%), Positives = 157/530 (29%), Gaps = 90/530 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M +E+V + G+R + + ++LE+N V++G N GK+S F +D Sbjct: 1 MRIEKVRVEGYRLLEDIEIVLEKNSTVIVGRNNSGKTSFTSIFDCFCGESGA--RFRLED 58 Query: 60 FWF-----------------PPGDINGREHHLHIILTFRESLPGRHRVR----------- 91 F P I + + LTFR Sbjct: 59 FSSLSREKFLNARKLKEEGASPEQIYNTLPIITLSLTFRYDSDAPTLGPLSPFIIDLDMD 118 Query: 92 --------RYRP-------LEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLD-KDG 135 YRP L P +I + + S +D D Sbjct: 119 STTAIACIEYRPVLAKMHLLFDLPQPPVGMEPQIHFFKCLRNNLSKIYEVHVSAIDPTDK 178 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV----------PNVEVTARQ 185 + L++ V R + + + P + ++ Sbjct: 179 SNKRNFEGTSAFAALLQCNFVQAQRTLDKTKLGEADVIGKLLSELFKTAAAPTATESDQE 238 Query: 186 LDFLARELSSHPQNLSDGQIRQGLSAMVQLLE-----HYFSEQGAGQARYRLMRRRASNE 240 L ++ + + L ++ ++ + + + + + Sbjct: 239 LAAKLKKSVEDIELNVQSDFDKMLKKLLPVMGVMGFPSLNDTELRPETSLNVEALLSGHT 298 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 + + D ++ G + +I + L ++ + + L+ IE+PE LH Sbjct: 299 KVVYSGTDGVHLPEGYNGLGTRNLIYMLLQLESYHKIYRSQITRPSAHLIFIEEPEAHLH 358 Query: 301 PIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 P M V + LN +Q I TT+S + + + V + V Sbjct: 359 PQMQEVFINQLNAAIQKLSSAYPAEDVWNVQFIITTHSSHVANAACFDAVRYFYNQKDSV 418 Query: 347 AA--------WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + ++ G +S+ D + ++ + FA ++VEG TE ++ L Sbjct: 419 KSIRNTKVKDFKKGMQTISSADKEFLHKYMTLTKCDLYFADKVIMVEGTTERLLMPRLRE 478 Query: 399 QCGHHFDAEG------IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 + IE + + ++ V+ D D Sbjct: 479 LVDISLPEHQKLASQYVTCIEAGGAHAHVFYPLLDFLELKTLVITDLDST 528 >UniRef50_B8DW92 Predicted ATP-dependent endonuclease, OLD family protein n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DW92_BIFA0 Length = 515 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 97/506 (19%), Positives = 171/506 (33%), Gaps = 55/506 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + I + + + ++ VL+G N GKSS+L L L+L + D Sbjct: 1 MRLTSLSIANHSRVTDFRIDVRRHLVLVGTNESGKSSILRCLDLVLGKSTA-------DL 53 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + RE L P DG H R E Sbjct: 54 YATVTAADIREPQL--------------------PFTIAVELENDGMHTC-MRFEAALDA 92 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQA-RHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + + + DGH + D+ +L P R + + TV Sbjct: 93 DGETVHISRTMGDDGHVVTAADLARIGWVYLSDSFPSNRETQHEIVDELLE-TVQLEQEE 151 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 V D AR L S P L A+ + + + + + + Sbjct: 152 AVFEAVADQYARLLHSSP----------ALLALRKRIADALTSALPMRCNPNNLMFVPGS 201 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + D+ ++ R GL + A L + ++ +++PET L Sbjct: 202 KLNRNPFSDVHLQLRMHGKQRGLWEQSGGLRSIYTVALYDLL--DEHVHIVGVDEPETHL 259 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP LL Q+I T+S +++ + + +VR + V + LS + Sbjct: 260 HPTSQRNLARLLKEGASQKILATHSPDIIGEFEPDQIV-VVRANGGVV--QPRRDFLSED 316 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D + +R +R L A ++VEG T+ ++ A G + DA G+ ++E Sbjct: 317 DKLLLHMWVR-DRLEPLTAEHVIVVEGVTDRALVEHCANVTGRNLDAHGVVLLEAGGCRE 375 Query: 420 KPLVK---FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDME-H 475 P + + LVD D G E E + L + +D+E Sbjct: 376 MPAWQRVFGEHGFRVPLTQLVDEDAQGD----LAHQYHVRAGELESK-LVFVSHVDLEAE 430 Query: 476 FMYRQGFSDVFHRMAQIPENVPMNLR 501 ++ G + ++Q P + Sbjct: 431 YIRALGVDLAYEALSQSNLFRPAETK 456 >UniRef50_A8SH00 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH00_9FIRM Length = 577 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 89/528 (16%), Positives = 180/528 (34%), Gaps = 70/528 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ VE+ FR I + S+ + L+GEN GK+++L AL + + Y +E +DF Sbjct: 1 MRLKSVEVENFRAIKKCSIRFNELTALVGENNSGKTAILRALNSVFN-----YEYEENDF 55 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 R I + F + P E + + H + R ++ Sbjct: 56 INGAHRYAPRTVT-KIKVHFCDL-----------PAEDFYREISGEDHELHLRFIYNYSK 103 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV--PN 178 L ++ + ++ + + + + + + R +R + + + Sbjct: 104 SSGGRKLYVEVNGEKKNLEPDKLGKIKQD-IDFIYIPANRSSRDIEWDEHTVFSRLVMHY 162 Query: 179 VEVTARQLDFLARELSSHPQNLSD---GQIRQGLSAMV---QLLEHYFSEQGAGQAR--- 229 ++ R D L+ ++ + D Q+ + L+A+ + ++ F+ + + R Sbjct: 163 LDDYTRNSDRLSPKVIEAGDKIIDRVLPQLARDLTALNMCEDVGKYQFNFKQSIDYRIFL 222 Query: 230 -YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 + E +S + G + ++ L L Q T Sbjct: 223 DKLGLEIINPEETQSL--------PVSEYGSGIKSLTVIALHRMLAQLGNTSI------- 267 Query: 289 LLLIEDPETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRLVR--- 341 +L IE+PET LHP + + L Q I T+S ++ + + + + Sbjct: 268 VLGIEEPETNLHPQAQRMLINSLKTGRQTCETQAIFATHSTVIVDALDHDDIVLVRKVRD 327 Query: 342 --ESSRVAAWRLGPSGLSTEDSRRISFH--IRFNRPSSLFARCWLLVEGETETWVINELA 397 S A +L + D + + + R+ FAR +L E T+ VI +L Sbjct: 328 ENRGSHSEAKQLPTTFWEDHDIQELKHYNFFRYRNSDFFFARYVILTESTTDAQVIEKLL 387 Query: 398 RQCGHHFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGD-EAGKKYAATVRSLLN 455 Q G+ + ++ +GI + +VD D K+ + S Sbjct: 388 NQ-GNTNKLYYVSIVNLDGVKNIRYPFFLLHDLGIPFCAVVDKDFFTTYKHGSLDASRNG 446 Query: 456 NDREAERE-----------HLTALPALDMEHFMYRQGFSDVFHRMAQI 492 N+ E D + +S F + + Sbjct: 447 NNYLPEYSGEVSNNKVIQFLFDTDEKKDELKNYLGKSYSQFFEYVKRY 494 >UniRef50_B9JB64 Chromosome partition protein n=3 Tax=Alphaproteobacteria RepID=B9JB64_AGRRK Length = 604 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 99/487 (20%), Positives = 163/487 (33%), Gaps = 44/487 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++EI FRGI + + VL+G N GK+++++AL LL + + DF Sbjct: 1 MQIAKLEIENFRGIREGVVRFAPHTVLVGSNNCGKTTVVEALALLFGRDRMVRQLTEHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRV--RRYRPLEACWTPCTDGYHRIFYRLEGES 118 + R + ++ F +H R R + W P + Sbjct: 61 YGSNPQPADRIRLVATVIDFDGDDSAQHMDWFRDDRGIVKWWNPVDGTVMPARTDPSWKL 120 Query: 119 A-----------EDGSVMTLRSFLDKD--GHPIDVEDINDQARHLVR-----LMPVLRLR 160 A V TLR F D D G E+ + L+R +P R Sbjct: 121 ACQVAFAARFHRPSLEVETLRYFHDDDAVGDVFADENATAFSARLIRDIGFFFVPATRTW 180 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQ-LDFLARELSSHPQNLSDGQIRQGLSA-MVQLLEH 218 D R + V E + + L + L + + + Q L Sbjct: 181 D-RTVSFGSELFRRVVAAGEGQPSESVLSERDRLRAPDARLEQDERLAPIVNRLNQELRG 239 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM---IDRPGGRSYRVILLGLFATLLQ 275 +F R + E Y + R G + L L Sbjct: 240 FFRTSPTLHLRVTATDSDSLLESVVSHYAHEGADLPLPARRHGSGLLSLQHLLLLLQF-- 297 Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEH 335 G +R + + + +E+PE + P + H + L Q +T+S + +L + Sbjct: 298 --GRMRAEANEGFWMALEEPELHVPPALQRRLVHRIQALSRQTFVSTHSPMVAALADPKG 355 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFA---RCWLLVEGETETWV 392 V L + + A L S L + + + NR ++ A L+ EG T+ Sbjct: 356 VAVLRNDGGLLTAVPLLTSTLPADTPNSVRKLFQVNRVETIAAVMHEFVLVPEGRTDYEW 415 Query: 393 INELARQCGHH----------FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 + L R H FDA + VI + V+ + +VDGD Sbjct: 416 LGLLVRAVDLHQGWAAADECRFDAF-VGVIPTHDGAVVRTVEAMAPLHPRVAAMVDGDVE 474 Query: 443 GKKYAAT 449 G YAAT Sbjct: 475 GVGYAAT 481 >UniRef50_A3DGM5 SMC protein-like protein n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DGM5_CLOTH Length = 688 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 89/518 (17%), Positives = 178/518 (34%), Gaps = 94/518 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M + ++ I FR I + S+ NVL+G+N GKS+++ AL L+L ++ +Y Sbjct: 1 MFVSKLLIRNFRSIEKESIDFRPGKNVLVGKNNSGKSNIVKALDLVLGEKNPVYLDINEK 60 Query: 59 DFWFPPGDINGR-EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF+ D N + + I + + ++ + W + I Sbjct: 61 DFFTYYEDGNEKVKKAFFIAVKLEGNDINEEL---FKSISGAWLATVGDKNLIEDFF--- 114 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQ------ARHLVRLMPVL-------------- 157 + L D + +D + A+ L V+ Sbjct: 115 -NTSKNPELLIKNFDTLSNRKYCKDTEELFDIFRNAQELYIYFSVMKNAEIENIDYDMDN 173 Query: 158 ------------------RLRDARFMRRIRNGTVPNVP-------NVEVTARQLDFLARE 192 R ++F ++N + + N E+ + R Sbjct: 174 QQGNYSKTYSIFLKHGNQYYRCSKFSNDLKNSLITSAILSAVRDINKELRINTWSWYGRL 233 Query: 193 LSSHPQNLSDG---QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYL-- 247 + +N + +I + LS + ++ + F A +++ + S++ L Sbjct: 234 IRDIWENCNPSQKREIDKKLSEIKEITDDIF--TNAASDIEEKIKKAIYHNSISFQLLQN 291 Query: 248 --------------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 D + +++ G +++ LF+ LL++E Sbjct: 292 TKDDIYKGINIFVNDGVEGLLEDKGTGIQSAVVISLFSYYCSKFHKNS------SLLVVE 345 Query: 294 DPETRLHPIMLSVAWHLLNL-------LPLQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 +PE LHP V + + Q I TT+S E + T + ++ + + S + Sbjct: 346 EPEIYLHPQARRVVSNKFDEFVNLNSTNRNQVIITTHSSEFIRNTDIGNIIVVKKVSGKT 405 Query: 347 AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH--- 403 R+ ++ ++ I FA +LVEG E ++I +A Sbjct: 406 KTRRIQMETGKHKELAKLQNIISTKNAEIFFADKVILVEG-GEEYLIPLIAEHYYQEKGF 464 Query: 404 FDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGD 440 D I V + KP ++ +GIE++V+ D D Sbjct: 465 LDYNNISVAKVGGKSFFKPYMEVLSCLGIEYYVIADFD 502 >UniRef50_C7XKH1 DNA helicase associated protein n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XKH1_9LACO Length = 641 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 76/501 (15%), Positives = 167/501 (33%), Gaps = 33/501 (6%) Query: 2 ILERVEIVGFRGINR-LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 L+ + I GF+ N + + IG N GK++ L AL L S + DF Sbjct: 7 RLKTLLIKGFKSFNEETKIDFSKETAFIGTNGSGKTACLLALNKLFSYNASDRIIHESDF 66 Query: 61 WFPPG--DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 + D R+ ++ + ++ + + + RLE Sbjct: 67 YINSANQDSQSRDLYIEAVFELDKANKDEDKKCEAQYWNRLIIKNGQDKPLLRIRLESTW 126 Query: 119 AE----DGSVMTLRSFLDKDGHPIDVEDINDQARHL--VRLMPVLRLRDARFMRRIRNGT 172 DG+V T F+ + I + L ++ + V +R+ + Sbjct: 127 TNSGIADGTVDTNIYFMTSLEDNNEENKIVARRSELSSIQFIYVPAVRNPERQLSNTSDG 186 Query: 173 -----VPNVPNVEVTARQLDFLARELSSH-----PQNLSDGQIRQGLSAM--VQLLEHYF 220 + V + +++ ++ +L+ L + Q ++ + Sbjct: 187 MISQLIKRVNWDDEIKQKIVSISSQLNDTFWDEKGSKLIQDTLNQEWKSLEPNSRFSNVK 246 Query: 221 SEQGAGQARYRLMRRR---ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + + + R R SN + +D ++ I S +L + T+ + Sbjct: 247 ASVSSIDINKIMSRIRFEFNSNVTNNVFSVDEMSDGIKSLFYISNIASVLAIENTV--QE 304 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPV 333 ++++ + +E+PE + P +L + + Q I T++S ++ Sbjct: 305 DDIKIEYPVVTIFALEEPENHISPHLLGKVMDKVKSITKLDNTQTIITSHSPAIIKRVLP 364 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 E+V V + + + P F++ +L EGE+E V+ Sbjct: 365 ENVRYFHLTKDAVTEVKKIKLPDDKGEKYKFIKRAVQTYPELYFSKLVILGEGESEEIVL 424 Query: 394 NELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 +++ D I ++ A + L + I L+D D +Y + + Sbjct: 425 SKIISSY-TGLDEANISIVPLAGRMVNYLWDLLESLNIAHITLLDLDY--GRYLGGKKRI 481 Query: 454 LNNDREAEREHLTALPALDME 474 + E +R + +E Sbjct: 482 KDIIDELKRFNPNDDELEKIE 502 >UniRef50_A9VNT7 Putative uncharacterized protein n=2 Tax=Bacillus cereus group RepID=A9VNT7_BACWK Length = 728 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 92/642 (14%), Positives = 201/642 (31%), Gaps = 116/642 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++++++ +R + + +E+N +++IG+N GK+SLL A + + F DD Sbjct: 1 MKIKKIKVSNYRLLKNMIFDMEENLSLIIGKNNCGKTSLLSAFEKFIGVKVGGNEFCYDD 60 Query: 60 FWFPPGDINGREHHL------------------------------------------HII 77 F + L II Sbjct: 61 FNMDFQEELYSIVKLNSIPTGLRFPMGIKLQLFITYDEFDNLINMSQLMMDLDPENNTII 120 Query: 78 LTFR--------ESLPGRHRVRRYRPLEACWTPCTDGYHRIF--------------YRLE 115 L+F E+L + + + LE IF +R Sbjct: 121 LSFEYTLSNTSLENLINEFKEYKDKKLEKVEEDRESLEQNIFNDFMKKNHKKYFKIWRKS 180 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN 175 + F+D I + I + R + + R + + + + Sbjct: 181 VAYDWEKQKKNEVEFVDLTKRNIALNKIINFKTIGARRN-ISNSNNDRTLSALSSKYYES 239 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 + E +++ LS L D +Q ++ ++ F G + R++ Sbjct: 240 KTDSEKGIEEVEVFKETLSKTDNEL-DSVYKQLFKTVIGKVKQ-FGGIKEGDSNIRIVST 297 Query: 236 RASNEQRSWRYLDIINRMIDR------PGGRSYRVILLGLFATLLQAKGTLRLDKDARP- 288 E + + G ++ + L+ + K+ P Sbjct: 298 LQHKELLKGNTTVMYEHFEKQTLPESYNGLGYLNLLSMIFEIELIISNFRKEHKKNEMPA 357 Query: 289 ---LLLIEDPETRLHPIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLT 331 +L IE+PE HP M + + + + LQ + TT+S + + + Sbjct: 358 DINILFIEEPEAHTHPQMQYIFINNIKKILEEASIGEDGKTKFNLQTLITTHSAHITNAS 417 Query: 332 PVEHVCRLVRESSRVAAWRLGPSGLSTE--------DSRRISFHIRFNRPSSLFARCWLL 383 + +E+ L E + + + ++ +R FA + Sbjct: 418 NYNDIKYFYKENKN-EVISKNLKDLEKEYEKDGEEQNYKFLKQYLTIHRSELFFADKAIF 476 Query: 384 VEGETETWVINELARQCGHH--------FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHV 435 +EG+TE ++ + ++ ++ ++ I ++E KF +GI+ + Sbjct: 477 IEGDTERILLPAMMKKIDNNSEYKSSPPLHSQNISILEVGAYSHI-FEKFINFIGIKSLI 535 Query: 436 LVDGDE-----AGKKYAATVRSLLNNDREA-EREHLTALPALDMEHFMYRQGFSDVFHRM 489 + D D +K +L++D E L +E + + Sbjct: 536 ITDIDSGKNVIVKEKEKIEKCRVLDSDAELTTNSSLKFFYKNGLEENKRSVIYKNELDYF 595 Query: 490 AQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDS 531 ++ N + + +K +S K ++AI + Sbjct: 596 KKLSFNQKILQKIKETKNWEKSEKGNIAIIYQTSEENSKGEK 637 >UniRef50_C6WN28 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WN28_ACTMD Length = 648 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 98/593 (16%), Positives = 178/593 (30%), Gaps = 82/593 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES---------- 50 M + +V I FR + + + +Q LIG N GKS++L AL + Sbjct: 1 MRISKVRIKNFRCLADVEVRFDQVTTLIGPNGVGKSTVLRALDWFFNGTKPGALLDEDRT 60 Query: 51 -----------DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEAC 99 + D G + +I R + R + Sbjct: 61 GGAEGDVVVEVEFDQLTDAD-REELGKHVPAQSERCVIWKIRRADGTELMSANARAFQGF 119 Query: 100 -WTPCTDGYHRIFYRLEGESAEDGS----------VMTLRSFLDKDGHPIDVEDINDQAR 148 W G + R + + + + +P ++D Sbjct: 120 AWIREVAGAAEMRVRYQQVRTDLPDLGLPAVRSKPEVEAALKAWELANPDRLDDAEVAVT 179 Query: 149 HLVRLM----------PVLRLRDARFMRRIRNG-------TVPNVPNVEVTARQLDFLAR 191 +L V D R ++G + + + LA Sbjct: 180 NLFGFNGQAKMSGLFDYVFVSADMRVEEEAKDGRSALVGRILERTVDRTAADADIKALAA 239 Query: 192 ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN 251 ++ S + + LS + L + G+A ++ R+ L + + Sbjct: 240 DVESRQDGIFAKNFAKQLSTLSASLSEAVGQYTVGRAVKVQATKQKIEPPRTQFSLSVTD 299 Query: 252 RMIDRPGGRSYRVILL--GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 +D P + + A L AK L IE+PE HP+ Sbjct: 300 SSVDTPVEKQGHGFQRTLLIAALQLLAKHGNAERGSGAICLAIEEPELFQHPVQARTFAS 359 Query: 310 LLNLL------PLQRIATTNSGELLSLTPVEHVCRLVR--ESSRVAAWRLGPSGLSTED- 360 +L L +Q T+S + + E V R+ R + + A + S E Sbjct: 360 VLRTLAEDDAQNIQVAYATHSPHFIDPSRFEQVRRVTRDPKPEKGCAPTVTVRSASVESV 419 Query: 361 SRRISFHIRFNR-----------PSSLFARCWLLVEGETETWVINELARQCGH-HFDAEG 408 +R+ + R +LF+ +L EG ++ VI LA + G Sbjct: 420 EKRLVGYFDNVRNRLPAIAETALAEALFSSGAILAEGSSDKAVITGLAEKSSKTSLLNCG 479 Query: 409 IKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAER-EHLT 466 + V++ S L +G+ +V+ DGD R LN + E E Sbjct: 480 VTVVDMNGKSNLFIGHAVLAELGVPCYVVFDGDL-----GLEGRKRLNAQPDKEDPETWA 534 Query: 467 ALPALDMEHFMYRQGFS--DVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLA 517 D+ + + ++ + P + P A + +P LA Sbjct: 535 KKFEADLAAALAKNTKDNRNLLQYLGTTPSDYPETCAHASYAAFVDTIEPLLA 587 >UniRef50_Q6M0D9 Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis RepID=Q6M0D9_METMP Length = 626 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 90/536 (16%), Positives = 171/536 (31%), Gaps = 86/536 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPE----SDLYHF 55 M L +V I +R I L L +Q NV++G+N GKS+++ A+ ++L + + Sbjct: 1 MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENI 60 Query: 56 ERDDFW--------------------------------FPPGDINGREHHL----HIILT 79 + DF+ F N ++H+ I Sbjct: 61 SKSDFFNADTSEDILIVCELSKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRI 120 Query: 80 FRESLPGRHRVRRYRPLEACWTPCTD-------------GYHRIFYRLEGESAEDGSVMT 126 F + W + + + +R E + Sbjct: 121 FYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVDRYALVFRARFEENVIKKDLV 180 Query: 127 LRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQL 186 L D + + N +L++ + RD + RI N T E T + Sbjct: 181 LLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN 240 Query: 187 DFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 +E + Q+ + L V + + + + +S Sbjct: 241 GEGIKEALKNLAT-ESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALI 299 Query: 247 L--DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIML 304 D + G + +GLF ++ + ++ LL IE+PE LHP Sbjct: 300 YVDDGFKSELKDKGSGIQSAMTIGLFNFYIK-----HIAHNSGSLLAIEEPELYLHPHGR 354 Query: 305 SV----AWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 + + Q I TT+S E + E++ +V + + + L D Sbjct: 355 RIISDRLSEFIGEDENQVILTTHSPEFICCAN-ENINLIVVKKDKSES---KAYNLQFND 410 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH--------------FDA 406 + I+ FA LLVEG + +++ E +++ G + Sbjct: 411 IKTRQILIKKQNSEMFFADAVLLVEG-ADKYILEEFSKEYGETKQVKSESELLGKNWLNN 469 Query: 407 EGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 + +I + L+ V + I + L D D + ++ L ND + E Sbjct: 470 YNVSIINCGGKTELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNE 525 >UniRef50_C4B7R0 Putative endonuclease n=1 Tax=Desulfotignum balticum RepID=C4B7R0_9DELT Length = 552 Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 91/530 (17%), Positives = 176/530 (33%), Gaps = 69/530 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + I FR I ++ L +L+G N GK++++DA+ + DF Sbjct: 1 MKAVEISIHNFRSICDTTISLSDCGMLVGANNAGKTTVIDAIRAFYGKGIKFE--KGRDF 58 Query: 61 WFPPGDINGREHHLHIILT--------FRESLPGRHRVRRYRPLEACWTPCTDGYHR--I 110 P E + I ++ R R R + R Sbjct: 59 --PHRGAIDNESWVEIEFKPNQAEFVNLKDDYKTDRRTFRVRNYLFSDQKDAENKARSGP 116 Query: 111 FYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR---FMRR 167 + + G +++ K G I + ++ + +L LRD + Sbjct: 117 YAYIGGNLSDERFYGFKNVGQGKFGEIIYIPAVS-KVDEHTKLTGPSALRDLLNTVLSKV 175 Query: 168 IRNGTVPNVPNVEVTA-RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + N + H + I + LS + + G Sbjct: 176 MEQSVAYQALNASFSQFEGAIKTEATAEGHSIQTIETDISEELSNWGAGFKLNINPVGID 235 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGL--FATLLQAKGTLRLDK 284 + L+ +E + I G R ++ GL A K K Sbjct: 236 EIIKGLVSHEIVDEDLGTS------QPISSYGQGFQRSLIYGLIRIAAKYSTKKPSAKKK 289 Query: 285 DARPLL---LIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELL--SLTPVEH 335 D P L L E+PE LHP +SV L L Q + ++++ S+ + Sbjct: 290 DFVPELTWILFEEPEAFLHPTQISVLSADLRALGKSGSSQVLLSSHNPLFATHSIREISS 349 Query: 336 VCRLVRESSRVAAWRLGPSG---------------------------LSTEDSRRISFHI 368 +CRL R++ + +++++ L+ ++ + + + Sbjct: 350 ICRLQRDNCQTSSYQISNQQLDAVLVSNQQDTQTWQTAGMTIDTDDLLTDMEAVKYALWL 409 Query: 369 RFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFAR 427 R ++ F+ LLVEG TET + + + R G + G+ +++ + ++ Sbjct: 410 DSKRSAAFFSEKVLLVEGPTETALFSYM-RDQGKLPNCNGVVIMDTIGKFNIHRFMRLFE 468 Query: 428 RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GI+ +VL D D ++ A ++ + T D+E F+ Sbjct: 469 CFGIKHYVLYDAD--NGRHPAIDVTIQAATNPLTKGVDT--FQKDLEDFL 514 >UniRef50_C7Q3I3 ATP-dependent OLD family endonuclease n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q3I3_CATAD Length = 669 Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 85/567 (14%), Positives = 163/567 (28%), Gaps = 98/567 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++I FR + + + +++ +++G N GK+SL++ E F +D Sbjct: 1 MRLTSIKIKNFRLLEDIEVGIDEIATLIVGRNNSGKTSLVNVFDKFFGDEDC--TFVLED 58 Query: 60 F-------------------WFPPGDINGR-------------EHHLHIILTFRE----- 82 F P D + L + +T+ E Sbjct: 59 FPAARIADIKQAHEWWAKAEHEEPADGIDPESDLHAAAVGLLPQMTLQLTVTYDEKENLA 118 Query: 83 -------SLPGRHRVRRYRPLEACWTPC--------TDGYHRIFYRLEGESAEDGSVMTL 127 L R + P + +F + Sbjct: 119 ALSGMILDLDEECRDVVIEAVLEADQPENFLAEYHTAASHQELFVEHRWLRSNFLKFFKT 178 Query: 128 RSF-LDKDGHPIDVEDIND-QARHLVRLMPVLR---LRDARFMRRIR-NGTVPNVPNVEV 181 + + G+P I +++ + + L D+ R + + + Sbjct: 179 SFYAVSVRGNPPARRPIKKSVIDNVLSVQFIYAQNKLDDSGTDRTRNLSKSFEDFHRAHS 238 Query: 182 TA----RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR------ 231 +D + L + Q + + + L + + Sbjct: 239 EDAERNHNIDGIDAALLTASQRVDKS-FAALFTPIFDDLNRFGVGNIEPVRVPKVVTKFD 297 Query: 232 -LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 R S + G ++I + + + A LL Sbjct: 298 ATSVFRGSTRIEYPAETGDMALPEGHHGLGYSKLIFTIVRIVDFYETHRRAVPRPAIQLL 357 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRES 343 IE+PE LHP M + +Q I TT+S ++ + E V R Sbjct: 358 FIEEPEAHLHPQMQEAFIANIRDFLRTKDGWNVQVIVTTHSPHIMMKSGFECVRYFDRWD 417 Query: 344 SRVAAWRL-------GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 L G + + R + ++ FA +LVEG E ++ E+ Sbjct: 418 PGARVRDLQTFQQLAGATTDGQDALRFLQQYMELRPCDMFFADKIILVEGTVERLLLPEM 477 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD-----------EAGKK 445 ++C + + VIE + + + ++ V+ D D E Sbjct: 478 IKRCAPTLAHKYLSVIEVGGAYALKFRELLSFLSVQTLVITDLDSGTLEGHHKACEPSTA 537 Query: 446 YAATVRSLLNNDREAEREHLTALPALD 472 A T + L + AER+ T L D Sbjct: 538 GAVTTNATLKSWLPAERDIATLLEIDD 564 >UniRef50_Q1LEC3 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Burkholderiaceae RepID=Q1LEC3_RALME Length = 626 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 93/544 (17%), Positives = 173/544 (31%), Gaps = 93/544 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ V I FR + +++ + IG N GKS++L AL + +D Sbjct: 1 MKIQTVRIRNFRTLKDVTIPFDSVTTFIGPNGAGKSTVLRALDWFFN--GKPGSLTEEDC 58 Query: 61 WFPPGDINGREHHLHIILTFRE-SLPGRHRVRRYRP-----LEACWTPCTDGYHRIFYRL 114 F D + + + +TF + + R + +Y P A DG + Sbjct: 59 SFGATDED-----IEVQITFADLTEKDREALGKYAPEGVGTFTAWKRRSPDGADVLSANA 113 Query: 115 EGESAEDGSVM--------TLRSFLDKDGHPIDVE------------------------- 141 +G +G L + L +D +D+ Sbjct: 114 KGFPDFNGIKAAGGATAKRELYASLRRDRPELDLPAANTGPAVEQSMTTWEAAHTDQLLD 173 Query: 142 ------------DINDQARHLVRLMPVLR-LRDARFMRRIRNGTVPNVPNVEVTARQLDF 188 + + L + V LR + + + + + D Sbjct: 174 APEALQTNFFGFNSGGKMSGLFDFVLVTADLRASEESIDGKASIIGRILERSIDRTAADE 233 Query: 189 LARELSSHP----QNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW 244 E+ + Q + + + ++ L A+ L + G+A R+ Sbjct: 234 AIAEIVAESRAKQQQVYEEKFKEQLGAITTQLNEVVTTYAPGRAITVSPAEVELKAPRTT 293 Query: 245 RYLDIINRM----IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 + +++ ++R G R +L+ L Q+ + L IE+PE H Sbjct: 294 FDVAVLDGTTETAVERQGHGFQRTLLISALQLLAQSG---AASAEGIICLAIEEPELFQH 350 Query: 301 PIMLSVAWHLLNLLP------LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 PI +L L +Q T+S L + RL R + V + + Sbjct: 351 PIQAQAFAKVLRSLAEDASKRIQVTYATHSPYFLEARHFHQIRRLTRSADEVPVVTVHCA 410 Query: 355 GLS--------TEDSRRISFHIRFNRPS----SLFARCWLLVEGETETWVINELARQC-G 401 + T D + + N +LFA LVEG TE+ V + + Sbjct: 411 TVEIVKAKLNGTVDGDVVDRRLDHNVADQLAIALFANRAFLVEGTTESAVFYGIGDRTSP 470 Query: 402 HHFDAEGIKVIEFAQSGLKPLV-KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREA 460 +A GI ++ PL +G+ + L D D + ++ E Sbjct: 471 GALEAAGISIVPVGSKTSIPLAHAILESIGVPVYALFDAD---GGFETRAKAKNKKQEEI 527 Query: 461 EREH 464 +RE Sbjct: 528 DRER 531 >UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A5EBD7_BRASB Length = 610 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 85/489 (17%), Positives = 165/489 (33%), Gaps = 40/489 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + R++I GFRG ++L ++ VL+G N GK+++++AL LL + + DF Sbjct: 1 MHIIRLKISGFRGARSADILLGRHAVLVGSNNSGKTTIIEALALLFGRDRLVRRLTEHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA- 119 D R + + F + P H + P + + + Sbjct: 61 HGSAPDETARIFCIATVTGFTPNDP-HHHASWFSPERGVEKWFDPNAMTLTATADAQHTD 119 Query: 120 -------------EDGSVMTLRSFLDKD-------GHPIDVEDINDQARHLVRLMPVLRL 159 E+ T+R F+D + + I + + V Sbjct: 120 LAVQIGFAARFDLEELEAETIRFFVDDEATLGDPFAEDAHLRTIYTKTLQELGFFLVPAS 179 Query: 160 RDARFMRRIRNGTVPNV--PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLE 217 R + V ++ A+ + + L + P+ + + + GLS +V Sbjct: 180 RTWDRWISFSSELFRRVVATRGDMPAQAVRAERQRLWAPPEG-ARLEDQPGLSEIVGAAN 238 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR--PGGRSYRVILLGLFATLLQ 275 A + +L ++ + + P R ++ LL Sbjct: 239 DELRALMASAPKLQLRLTATDSDSVLESVMPHFVQGTGPTLPSQRQGTGLVSLQSLLLLM 298 Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEH 335 G R + +L +E+PE + P + LN L Q I TT+S + +L P + Sbjct: 299 QFGKARAETGQSFVLAVEEPELHIQPSQQKRLVNRLNALCDQTIVTTHSPIVAALFPAPN 358 Query: 336 VCRLVRESSRVAAWRLGPS--GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 + + A L + T + + + R ++L C L+ EG ++ + Sbjct: 359 TLFIETREGVLKAKPLMSAVPAQPTNHQQHLLYAWRQKLVAALMHECVLIPEGVSDVAWL 418 Query: 394 NELARQC-----------GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 L G + + ++ + + + +LVDGD Sbjct: 419 EALQTALELHQSWQDAGDGASLLSTFVGIVPTIDAKIADTFTLVSAVHARPCILVDGDND 478 Query: 443 GKKYAATVR 451 G+ Y VR Sbjct: 479 GRGYFDVVR 487 >UniRef50_B8FVQ2 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Clostridiales RepID=B8FVQ2_DESHD Length = 564 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 87/549 (15%), Positives = 179/549 (32%), Gaps = 62/549 (11%) Query: 1 MILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L + I F I+ + + ++ VLIG N GK+++L A L + + E Sbjct: 1 MRLCELLIKNFYCIDSVGIRVKIDNIIVLIGPNNVGKTTVLKA-YELFTKSGEPQPIES- 58 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY-HRIFYRLEGE 117 F+ N E+ + I F + + + W Y I Y+ Sbjct: 59 -FYQ-----NKEENAIEITGIFSDISDEDK-----KQIGEKWLYTDSEYGDVIKYKWRWN 107 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD--ARFMRRIRNGTVPN 175 + + + +K + + + + + D A ++I + Sbjct: 108 KVNEKAKKQSWNEAEKKWESGGMGGWDSKIASCLPTPLKINPFDDAASLEKQIVDILTTA 167 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 V + + + N +I + LS L+ + + + Sbjct: 168 VKESIKSDNSKLSGMIDQMNTLANEVKSEINEELSKTTSKLQDNIGDIFPEHKIDLMPQA 227 Query: 236 ---------RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ----AKGTLRL 282 + R L +I++ G R L L G L Sbjct: 228 GKIDVDKILASGTHIRVADSLGTFYPLINQ-GSGLQRAFLWSAIEALADTGNYKSGKKVL 286 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVE-HVC 337 + +LL+E+PE+ LHP + A L + Q + TT+S + ++ + Sbjct: 287 SSNEPRILLVEEPESFLHPPAIRAAREALYKIADLENWQVMITTHSPIFIDVSKPHTTIV 346 Query: 338 RLVRE-SSRVAAWRLGPSGLSTEDSRRIS--FHIRFNRPSSLFARCWLLVEGETETWVIN 394 R+ ++ S + + ++ R+ + F+ +LVEG+TE ++ Sbjct: 347 RVEKQCDSSTKIFSTDKADFDEDERERLQMIRNCHPTINEFFFSDKIILVEGDTEQSTLS 406 Query: 395 ELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAA----- 448 EL I ++ P K G+ + V+ D D K Sbjct: 407 ELKGNTD-------ITIVNCRGKANIPMFQKILNHFGLSYTVVHDLDSPRVKRKEKWITN 459 Query: 449 ---TVRSLLNNDREAEREHLTALPALDMEHFMY------RQGFSDVFHRMAQIPENVPMN 499 ++ + + ++ + +L + D E + + ++ V Q E V Sbjct: 460 AMWSINNKIVDEANKKDGNLVIVNVPDFEGQFFGYLQKGDKPYNAVKELAKQEKEEVRAE 519 Query: 500 LRKIISKAI 508 L +I++ + Sbjct: 520 LNEILTNTL 528 >UniRef50_C9LL80 Putative uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL80_9FIRM Length = 543 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 81/496 (16%), Positives = 155/496 (31%), Gaps = 88/496 (17%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + V I +R ++ + + N ++G+N GKS+ L L + Y F D Sbjct: 1 MYISDVRIENYRTFQDVTFHFDSRANYIVGDNNIGKSNFLSFLKTVTHG----YGFREAD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + + T + G ++ + Sbjct: 57 F-------LDENNPIRVFFTLSSADMGTGEFAHI------------ELRQLVSEVVPTLI 97 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR--LRDARFMRRIRNGTVPNVP 177 + G + +E + L V R + D ++ Sbjct: 98 NSDT-----------GERLPLEYMRCLFYIDYALDDVPRNMVTDEELLQ-----ISSLYK 141 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 + + A EL + L A+V++L+ F+ +R Sbjct: 142 DYLSAGEETIREAEELLAKKGLPVSLPSDPNL-AVVKILKVIFTSDKDAAPSGFTIR--- 197 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 ++ +++++ ++ + ++ + L +L I++PE Sbjct: 198 ---LMFAIASHLLVQLVEKRNSKAIPFENIIVYNKWGKRFFPL--------VLSIDEPEL 246 Query: 298 RLHPIMLSVAWHLLNL---------------------LPLQRIATTNSGELLSLTPVEHV 336 LHP + L L Q T+S + L + + Sbjct: 247 HLHPYLQRAVLAFLQSILNNEEPFFKKLIQRTLGVDGLDGQLFVVTHSTDSL-VNDYRQI 305 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRP---SSLFARCWLLVEGETETWVI 393 RL + G + +R I H+ + P +L++RC +LVEGETE Sbjct: 306 IRLYWNEEKKVQVSCGT---TFHFNREIEKHLIMHFPEVKEALYSRCTILVEGETEYGSF 362 Query: 394 NELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 A+ G +FD GI +I S + + + RR I L D D + V Sbjct: 363 PYFAKTLGINFDYYGICLINARGESSITKISQLIRRFHIPTVCLYDKDVMVENPKPYV-- 420 Query: 453 LLNNDREAEREHLTAL 468 + E + + A Sbjct: 421 FYTDYICYEMDVVQAC 436 >UniRef50_A9L496 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Shewanella baltica OS195 RepID=A9L496_SHEB9 Length = 613 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 95/584 (16%), Positives = 188/584 (32%), Gaps = 78/584 (13%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHF---E 56 + L+++ I GF+GI+ R+ + + NV++G+N GKS++L AL L ++ + Sbjct: 2 IKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNNT 61 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRR--YRPLEACWTPCTDGYHRIFYRL 114 D F + + I + V Y L W G Y + Sbjct: 62 TDQFSVIELYFSPNNTPIVIDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYFV 121 Query: 115 EGESAEDGSVMTL----------------RSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 E S D +L L + + + ++ L Sbjct: 122 ERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDTGEEHNNAEKRNRLREFFVERG 181 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQ-LDFLARELSSHPQNLSDGQIRQGLSAMV-QLL 216 + ++ + E + L L+ P + SD I++ M Q++ Sbjct: 182 DESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQVI 241 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQ------------------RSWRYL---------DI 249 + + + + ++ S W L Sbjct: 242 QDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNGN 301 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 + + G R+ ++ F L + K + + E+PET LHP + Sbjct: 302 GSVPLSARGDGFRRITMMAYFEYLAEQKS----GEIQNIIFAFEEPETFLHPSAQENLFE 357 Query: 310 LLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF 366 LN + Q TT+S ++S T + R+ +E+ ++ + + Sbjct: 358 KLNDISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCDSKVNDH--SDIANDLGI 415 Query: 367 HIRFNRPSSL-FARCWLLVEGETETWVINELA------RQCGHHFDAEGIKVIEFAQSGL 419 I S +C+LLVEG + N LA +F G+ I G Sbjct: 416 TIDNQFISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGS 475 Query: 420 KPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHF 476 + + + + +D D+ + + L E ++ ++E++ Sbjct: 476 IKHWVTLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENY 535 Query: 477 MYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 M +G + +P + KA+ +S+ LA + Sbjct: 536 MSLEGIERL------VPGANLIFTDWCDVKALSKSN--GLAGAL 571 >UniRef50_B9MK32 ATP-dependent OLD family endonuclease n=2 Tax=Clostridia RepID=B9MK32_ANATD Length = 652 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 85/527 (16%), Positives = 179/527 (33%), Gaps = 61/527 (11%) Query: 1 MILERVEIVGFRGINRL-SLMLEQNN-VLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + ++ I ++ +ML++ IG+N GKS++LDA+ + ++ Sbjct: 1 MYISKMRIRNYKSFLDSGEIMLDEKIFAFIGQNNTGKSTILDAVKVFFPNYKK--QVDKK 58 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 D D E L + +F E+ R+ L + D I L + Sbjct: 59 DIHRGINDSIIIEMWLGGVESFFENTRTDEVDRQVEKLLS---KADDNSLYIKLVL---N 112 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 EDG+ +R + DKDG I + LV ++P +R + ++ + Sbjct: 113 IEDGTNKNIRKYFDKDGEEIKEATLKKLLPELV-VIPAIRDPEKESTADRKSYLRSLIDI 171 Query: 179 VE------VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 ++ + + R S ++ + R+ ++ Q + Y++ Sbjct: 172 LDSEYKTDILIKDEGVEKRVNYSQLNDILTKEARKRCESLSQKITEYYNSTLGNNNFRIN 231 Query: 233 MRRRASNEQRSWRYL--------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 + + + I I G V++L + T ++ ++ Sbjct: 232 LEPTVDIYSATKYNTSIVEIIGNEKIENDILNFGTGYQSVLILSILQTYVEIARSV---- 287 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRE 342 + + +IE+PE LHP + L + Q I T++S +S P ++V ++RE Sbjct: 288 -GKYIFVIEEPEIYLHPNLQRKMIETLINISERNQVIFTSHSPITISNLPKKNVKLVLRE 346 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 + + P + E + L ++ + VEG+ + V+ EL + Sbjct: 347 REKSIVKEINPKEVINE--------LGIKADDFLGSKGIIFVEGKDDFEVVRELICKLDD 398 Query: 403 HFDAEGIKVIEFAQSGLKPLVK-----FARRMGIEWHVLVDGDEAGK------------- 444 + I VI + I ++ D D Sbjct: 399 NLLNM-INVIPVNSCCNLKFFANAELFLNKYFEIPVVIIRDADTNDPEKLKSDFLKEMFE 457 Query: 445 --KYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 K S + ++ ++ L +E++ + F ++ Sbjct: 458 FIKQYEFADSEIVEKKKKLVQNTNILQHYSIEYYFLNELFLKDYYDY 504 >UniRef50_A9C2Y9 ATP-dependent endonuclease family protein n=3 Tax=Bacteria RepID=A9C2Y9_DELAS Length = 600 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 107/590 (18%), Positives = 189/590 (32%), Gaps = 77/590 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + +V++ FRGI + L ++V +G+N GKS+LL+A+ L+L PE + Sbjct: 1 MQIAKVKVEKFRGIESGIVTLSGHSVFLGDNNVGKSTLLEAIDLVLGPERLSRRPVIDEH 60 Query: 59 DFWFP-PGDINGREHHLHIIL-----------TFRESLPGRHRVRRYRPLEACWTPCTDG 106 DF D G + I + FR+ + + L P +G Sbjct: 61 DFHAGRYLDEEGDPVLIRIEVIVSDLSAEQQRHFRDHI--EWWSATEKTL--LVGPPPEG 116 Query: 107 YH------RIFYRLEGESAEDGSVMTLRSFLDK----DGHPIDVEDINDQARHLVRLMPV 156 + EG ++ T +F +G + + + + + Sbjct: 117 TDASDVSAALRVFFEGRYDKEEDDFTGNTFFATPVLAEGTHPTFKTTDKRKCGFL---YL 173 Query: 157 LRLRDARFMRRIRNGTVPNVPNVEVTAR-----QLDFLAREL-SSHPQNLSDGQIRQGLS 210 LR + G++ +V R L R+L + L + + + Sbjct: 174 RTLRTGARALSLERGSLLDVILRLQDKRVTMWEDLLNELRKLPVADKPELGIAPLLKDVQ 233 Query: 211 AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLF 270 V+ + R + R A + + R Y G Sbjct: 234 DAVRRFVPSDWAEEP-HMRVSDLTREALRKDLTVFMGTGAKRPDGSTYCAPYHHQGTGTI 292 Query: 271 ATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSL 330 TL+ A ++ + +E+PE L P + + Q + T++S +L Sbjct: 293 NTLVLALLSIIAGLKQNVIFAMEEPEIALPPHTQKRIVNSVRETSAQALFTSHSPYVLEE 352 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 + L R+ +++A + + F RF +L AR L+VEG TE Sbjct: 353 FAPSEMHVLRRDGGKLSAMLATYPPAVKPKAYKAEFRARF--CEALLARYVLVVEGRTEF 410 Query: 391 WVINELARQCG-------HHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEA 442 I AR+ +A G+ VI+ + + PL KF R +G + D E Sbjct: 411 DAIPAAARRLNDLNPTEYKTLEALGVAVIDAQTDAQVAPLGKFFRDLGKTVFAVFDKQEP 470 Query: 443 GKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRK 502 A A H E+ + R A Sbjct: 471 AASAAIK----------AAVHHSFESAEKGFENVVLHHTAEAALRRYALSLVAENAWPNH 520 Query: 503 IISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD 552 +I+K P+ A V ++ + A+G D Sbjct: 521 LIAKT------PNAAQTVEQ-------------IRDALRQFFGWAKGSGD 551 >UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Tax=Proteobacteria RepID=A1TS10_ACIAC Length = 641 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 104/643 (16%), Positives = 204/643 (31%), Gaps = 139/643 (21%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY--HFERD 58 M + R+EI FRGI +L L Q+ VL+G+N GK+++L+A+ L+L P+ + Sbjct: 1 MQVARIEIHNFRGIREATLDLVQHAVLLGDNNTGKTTVLEAMDLVLGPDRLNRTPPVDEH 60 Query: 59 DFWF----------------------------------------------------PPGD 66 DF+ P G+ Sbjct: 61 DFFLGRYLPESSVGAEEDKADEEVVDHPGDIQQVAEGQVPEQGIPVAGEQTEGAGAPAGE 120 Query: 67 INGREHHLHIILTFRE-SLPGRHRVRRYRPL------EACWTPCTDGYHR------IFYR 113 + I +T S + R Y + P +G + Sbjct: 121 PEVPAPQIRIGVTIANLSEEQQGRFGDYIEFWDSKEKKLYQDPAPEGVDAATVSPALRVT 180 Query: 114 LEGESAEDGSVMTLRSFLD---KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRN 170 G+ + ++F DG P+ + Q L L LR R R + Sbjct: 181 FIGQYDPEEDDFEGKTFYTVTLSDGAPVPFTKKDKQVCGL------LYLRSVRTGSRTLS 234 Query: 171 GTVPNVPNVEVTARQLD-FLARELSSHPQNLSDGQ-----IRQGLSAMVQLLEHYFSEQG 224 ++ ++ + +++ + + +S + I L ++ L+ Y ++ Sbjct: 235 LERGSLLDIILRLKEVRPQMWEDAIGRISAISVAEDPSLGISGVLESINTALKKYVPKEW 294 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 + ++ + + + D + G L+ A + + Sbjct: 295 GIE---PHLKVSNLTREHLRKVITAFIATGDGTHAAPFYRQGTGTINMLVLAMLSQIAED 351 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 + +E+PET + P H + L Q + T++S +L + L R+ S Sbjct: 352 KQNVIFAMEEPETAIPPYAQKRIIHEVRKLASQTLFTSHSPYVLEEFSLPETIILSRDGS 411 Query: 345 RVAAWRLGPSGLSTEDSRRISFH---IRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 L SG++ DS ++ + R L AR L+ EG TE R+ Sbjct: 412 G----SLKQSGVTLPDSVKLKRYRQEFRTRFCEGLLARRILIAEGATEASAFPAACRRLA 467 Query: 402 H-------HFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 ++ G+ V++ G P + K R +G L D Sbjct: 468 ELNPAVYASLESLGVCVVDAGGEGSIPDMAKMYRSIGKRTFALCD--------------- 512 Query: 454 LNNDREAEREHLTALPALDMEHFMYR--QGFSDV------------FHRMAQIPEN---V 496 + AL +EH +G ++ F + P++ Sbjct: 513 ------LQSPEAQALIKAQVEHMFMHGEKGIENLVLKNTSKAALDRFSDLLDWPQDLLEK 566 Query: 497 PMNLRKIISKAIHRS-SKPDLAIEVAMEAGRRGVDSVPTLLKK 538 + + + A+ +K + +A + VP +++ Sbjct: 567 FKDPKADVVNALMAYFAKKKGDMGIAEFIAQCDEAEVPQWIRE 609 >UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Clostridiales RepID=D1VTS9_9FIRM Length = 656 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 84/524 (16%), Positives = 169/524 (32%), Gaps = 88/524 (16%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPES---DLYHFE 56 M L +++I +R + L ++ + +++G N K+S + + +L + Y Sbjct: 1 MRLSKIKIKNYRLLIDAELDIDAKTTLIVGRNNTAKTSCSNCINTVLQGNDFSYNDYPIS 60 Query: 57 RDD-----FWFPPGDINGREHHLH----IILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 + + F+ E I + F + + L Sbjct: 61 KRENLYNLFFQFMEKKLSYEDLCRGIEPISIEFVVDYSLDDQDTKLGALSPFIIDVDVDT 120 Query: 108 --HRIFYRLEGESAED-------GSVMTLRSFLDKDG---------------------HP 137 I + + E S + F K +P Sbjct: 121 TTALIRAEYQLKIDESKLRELFKDSCYSNDKFAPKAEEMHAKLASNFSRLFGLIIYAVNP 180 Query: 138 IDVED----INDQARHLVRLMPVLRLR----DARFMRRIRNGTVPNV---------PNVE 180 ++ED + + + L P+ R D + + + P++ Sbjct: 181 KNLEDWQVKSHRELKDLFPYYPIPAERILGEDGTQKNESLSSLIADYFSLNEEDLTPDIA 240 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 ++L + + + Q SD + +S V E G + + N+ Sbjct: 241 EKVKELRAVVDGANKNVQKESDRILSDLVSKAVGFGYPNVEELQLGVTTELKIDDQIKNQ 300 Query: 241 QRSWRYLDIINRMIDRPGGR-SYRVI-----LLGLFATLLQAKGTLRLDKDARPLLLIED 294 R + + Y+ + LL FA ++ KG + PLL IE+ Sbjct: 301 TRLSYSSGASDESLPSSHNGLGYKNLIKMEFLLAAFARDVEKKGDACI-----PLLFIEE 355 Query: 295 PETRLHPIMLSVAWHLLNL-------LPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 PE+ +HP M L + +Q TT+S + + + + S V Sbjct: 356 PESHMHPQMQHAFAEHLEKFLDKITTVHIQTFLTTHSAHIANTMDFSKIRYAKKSKSGVV 415 Query: 348 AWRLGP-SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH--F 404 L + + ++ I ++ +R FA + VEG +E ++ ++ +C F Sbjct: 416 YKNLDIFARENADNMDFIKKYLTLSRCDLFFADKIIFVEGASERLLLPDMIEKCEKEKLF 475 Query: 405 DAEG-------IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 D+E +IE + + FA +G+ +L D D Sbjct: 476 DSEKYKLPAQYYALIEIGGAYAYKFIPFADFLGLPCLILTDIDS 519 >UniRef50_C8SCF2 SMC domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCF2_FERPL Length = 637 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 90/542 (16%), Positives = 177/542 (32%), Gaps = 65/542 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +ER+E+ FR I LS+ + VLIG N+ GK+S+L+A+ ++ + + D Sbjct: 1 MKIERLEVKNFRSIYDLSVEFGRITVLIGRNSSGKTSILNAIRVIFENLDTISTEKNLD- 59 Query: 61 WFPPGDINGREHHLHII-LTFRESLPGRHRVRRYRPLEACWTP-------CTDGYHRIFY 112 I + I L F ++ + G + + Sbjct: 60 ---VNTITEQGLRDQIRGLWFYTHQNKPIKLAVSLNFDKEEGDTLKDICGLESGVEKAYI 116 Query: 113 RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT 172 + E ++ L++ + V+ + + + + R+ N Sbjct: 117 EVSIEKNDNQITWKLQNIVVYGHVTETVKIAKEALEGMKEIHSKVTKRNVDLKAERFNPL 176 Query: 173 V-------PNVPNVEVTARQLDFLARELS-----SHPQNLSDGQIR-------QGLSAMV 213 V N EV LD + ++ S ++D I+ L M Sbjct: 177 TQCVIVENGTVKNEEVLKSFLDIIKDKVYYIDTFSGVSKMADIPIKGLFTQSITPLELMN 236 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL 273 + A + R+ + D + G S L G + Sbjct: 237 AIRN--VIRTFALRKMLYDYLRQIRGNIYEYEQPDRAETLTKSYEGTSLSYELFGSGDQI 294 Query: 274 LQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL----NLLPLQRIATTNSGELLS 329 + + K + LIE+PE LHP + +L N L +Q I T+S + ++ Sbjct: 295 TEGILASIISKGKHHVFLIEEPEVHLHPAYVRSLAKVLEILANSLDVQLIIVTHSPDFIA 354 Query: 330 LTPVEHVCRLVRES--------------SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS 375 + VR+ + + + LS ++ + Sbjct: 355 GLKDKRFVIGVRKELIETELEGYLTILPATIVFYPFRGGRLSES----LARELGVVPGYF 410 Query: 376 LFARCWLLVEGETETWVINELA-----RQCGHHFDAEGIKVIEFAQSGLKPLVKFAR-RM 429 LF+ +LVEG ++ ++ +Q + ++ F + LK L+K R Sbjct: 411 LFSDAVILVEGNSDRILLQRYIDILIEKQLLENLPKLSYTIVPFGRRNLKELIKVFRDDY 470 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 G+ V+ D D+ G+K + + E + D+ ++ + F Sbjct: 471 GLRVFVIADNDQQGRKAVNDAKEM----ELRENYEVFTTNRKDILCYIKSEDFVKALDES 526 Query: 490 AQ 491 + Sbjct: 527 LR 528 >UniRef50_Q5JHA7 Predicted ATP-dependent endonuclease, OLD family n=1 Tax=Thermococcus kodakarensis RepID=Q5JHA7_PYRKO Length = 648 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 84/561 (14%), Positives = 196/561 (34%), Gaps = 65/561 (11%) Query: 1 MILERV---EIVGFRGINRLSLMLEQNNV-----LIGENAWGKSSLLDALTLLLSPESDL 52 M L ++ +I +R I L L E V +IG+N GKS++L+A+ ++L + Sbjct: 1 MRLLKLIGLKIRNYRSIKELPLNDEYLMVENFVTIIGKNDAGKSNILNAIRIVL----EE 56 Query: 53 YHFERDDFWFPPGD--------INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 +DDF + + I+ + + + + T Sbjct: 57 DKVTKDDFHKGTNENIEISLIFDATENTEIMHIINHDSNETAKGLGAFFSRYNNKSSTNT 116 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGH-PIDVED---INDQARHLVRLMPVLRLR 160 + + + ++ + T+ + D+D + + ++D IN L ++ + +R Sbjct: 117 KIKIKKIFEKDKLNSRNYKGDTIVEYFDEDKNKWVKIKDKKLINTILNDLPEVIYIPAIR 176 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMV------- 213 DA ++G + + + + +Q + E + + S ++++ L ++ Sbjct: 177 DAIAETTQKSGFLMSKLLLPLLEKQNKSNSNEENGKEKQRSITELKKELQNLISRESKKL 236 Query: 214 --QLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDII---NRMIDRPGGRSYRVILLG 268 ++L+ + + + N + D + +++ G LL Sbjct: 237 TKKILKELTVFNSSIEEIKIEPNKVQINFSPKIQIKDKYLPDSVPLEQRGAGLRSEFLLA 296 Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGE 326 +F + +LL E+PE LHP + L + Q + TT+S Sbjct: 297 MFRIWAEV------GAGKGYILLFEEPELYLHPEAQKKMFSALKRISNEAQVLITTHSTI 350 Query: 327 LLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 + + ++ + + RE+ + +E I + + VEG Sbjct: 351 FVDRSDLKSIWLIRRENGETKITTFEKPKVLSEILEEIG----ATPSDLFLSNGVIYVEG 406 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-----LVKFARRMGIEWHVLVDGD- 440 +TE V +++A+ ++ I ++ ++ L + V++D D Sbjct: 407 KTEIKVFSKIAKAICPKWEEYNISIVSLGGGNIRDLSETLLFNGLASLNPNGVVVIDSDG 466 Query: 441 EAGKKYAATVRSLLNNDREAER-----EHLTALPALDMEHFMYRQGFSDVF------HRM 489 E K + + + E + L ++E+++ F + Sbjct: 467 EQEDKKSGGCKPKPEKLKIKENFEQYGLTVHILQRREIENYIPLNILEKYFIEGYIKSKY 526 Query: 490 AQIPENVPMNLRKIISKAIHR 510 + + + KI SK + Sbjct: 527 ITKIGDQQLKVNKIKSKEYFK 547 >UniRef50_B2GJX2 Putative uncharacterized protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJX2_KOCRD Length = 692 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 103/534 (19%), Positives = 166/534 (31%), Gaps = 93/534 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L V I FR + L L Q LIGEN GKSS+L A+ +L + +DF Sbjct: 1 MRLTNVRIKNFRAHSNTELPLPQLGCLIGENNAGKSSVLHAIQYVL----EDRKLSAEDF 56 Query: 61 WFPPGDINGREHHLHIILTFRESLP--GRHRVRRYRPLEA------CWTPCTDGYHRIFY 112 P L I E L R R + T DG Y Sbjct: 57 RNP---ELPASVELSIEGIDEEDLRRVNETHRDRVREMLKDGVLTIVRTQEIDGKAESRY 113 Query: 113 RLEGESAEDGSVMTLRSFL-DKDGHPIDVEDINDQ------------------------- 146 G S +L S + K G + + Sbjct: 114 LKPGPRDPSWSQESLASTIKGKKGAQLRQAAVELLPPMEDALPPAPSQQQVKDAWTKLVE 173 Query: 147 ----------------------ARHLVRLMPVLRLRDARFM-RRIRNGTVPNVPNV--EV 181 L ++ + ++DA + + + + + Sbjct: 174 QLPPEELEERPTAYPTGIAQSVKPLLPSVIYIEAVKDASVEAKSTGSSAFSKLLELLFDE 233 Query: 182 TARQLDFLARELSSHPQNLSDG------QIRQGLSAMVQL---LEHYFSEQGAGQARYRL 232 A Q + + S Q L+ ++ L A+ ++ +E + G + Sbjct: 234 VADQFSDINDQFRSVYQKLNRSLNDDGLEVDARLEAVQRIESTIEEFVRASFPGVSLRMD 293 Query: 233 MRRRASNEQRS---WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT------LRLD 283 + + S R D I G R +L L + T Sbjct: 294 VPAPTLSMLLSGAELRIDDGHEGSISSKGDGLKRTVLFALLRAYASIRSTGLSDDTRSES 353 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVR 341 +LL E+PE LHP L Q + TT+S E RL + Sbjct: 354 PRPSYVLLFEEPELYLHPRAQRQLMAALGTFSNEHQVLVTTHSPGFFRPG-TEGFARLQK 412 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 V A + + + D+ +I H N ++ FA+ +LVEG+++T+ LAR Sbjct: 413 TDDGVTAHPVDLT-IGHRDAYQIVQH--ENNEAAFFAQRVVLVEGDSDTFTYPHLARLIN 469 Query: 402 HHFD--AEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 +D + I ++ G + +F I HV+ D D + + R Sbjct: 470 QDWDDIDKNIMFVKIDGKGNINRYREFFSSFKIPIHVITDLDALVRGFEQLTRD 523 >UniRef50_B8FV59 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Bacteria RepID=B8FV59_DESHD Length = 601 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 101/560 (18%), Positives = 192/560 (34%), Gaps = 87/560 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + V++ +R I+ ++++ N +IGEN GKS+ L + + + + F+ D Sbjct: 1 MRIFCVKVSNYRNIDGITVIFHPDCNYIIGENNLGKSNFLSLIGTVCAGKG----FDEKD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F P + + + + ++ G ++P +I YR ++ Sbjct: 57 FADP-----DKAIEVELDIKLLQNEQGF--------FGDNFSPEDASLLKIRYR---QTI 100 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 ++ + ++ + IN + R+ R + G + N Sbjct: 101 KEAYPTIVSVDSNESIQARLLRKINFLKYE----TTAVPSRELRLDSQKGAGLLINGIIE 156 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 A P L+D QI + + + L S + + + Sbjct: 157 RFIAD----------GEPAFLNDEQIGGLMKFINEHLGKIRSFH--DYSIKATIAPNPTE 204 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK-----------GTLRLDKDAR- 287 S YL R ID G + + + L Q L D D R Sbjct: 205 MLTSLFYLSDGYRKIDTTGSG-VQYMAMASINILCQIMELYKSKSSPFGEQLYTDDDGRK 263 Query: 288 --PLLL-IEDPETRLHPIMLSVAWHLLNL---------------------LPLQRIATTN 323 PL+L I++PE LHP + L Q + T+ Sbjct: 264 LLPLVLSIDEPEVHLHPYLQRSLIGYYKKILCNEDVKFVELLKSCFGVDGLDGQLVIVTH 323 Query: 324 SGELLSLTPVEHVCRLVRESSRVAA---WRLGPSGLSTEDSR---RISFHIRFNRPSS-- 375 S + + ++ R + R A + L P + + R H+ + P Sbjct: 324 STD-ALVGDYRNLIRFHKNGDRTAVISGYALRPIEGANNEGRIKSENEKHLIMHFPEIKE 382 Query: 376 -LFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIEW 433 +++C +L+EGETE I+ A + G D GI VI + +KPL + I Sbjct: 383 AFYSKCAVLIEGETEYGCIHAFADKIGVALDDCGICVINAKGEKSIKPLRQLLTLFAIPS 442 Query: 434 HVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP 493 + DGD + + A N+ E E + +L + + + + + ++ + A +P Sbjct: 443 IAIYDGDVR-EGHTAAADEFFTNESCYEIEIVKSLYSQNKQDIVKQIA-KELDSQYATVP 500 Query: 494 ENVPMNLRKIISKAIHRSSK 513 + + I S+ Sbjct: 501 LDFDFVSKHFKKMGIELYSQ 520 >UniRef50_C4FPP4 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPP4_9FIRM Length = 576 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 75/509 (14%), Positives = 168/509 (33%), Gaps = 66/509 (12%) Query: 1 MILERV-EIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M ++ + I +R ++ S++ + N +IGEN GK+++L+ L ++LS F+ Sbjct: 5 MYIKEIKTISNYRNLSGQSMVFDKDLNYIIGENNIGKTNILELLNIILSEG----KFKEA 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF + + T + + E Sbjct: 61 DF-------ADLSSPIEVKYTISYDDSSIGFFEDNFDINE----------DNCITIIAEQ 103 Query: 119 AE-DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 DG + +K + + + + +P + NG+ + Sbjct: 104 DLIDGRISYYHDTPNKTSISFSIIKKINSLYYFAQRLP-----SKELDFKGSNGSSKTLN 158 Query: 178 NVEVTARQLDFLARELSSHPQNLSD--GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 + + ++ L + ++D G++ + ++ + + + L R Sbjct: 159 YLIKKSLEIVKLEESDLINSPKINDVIGEVNKSINYINDITGDSVNASLDSSHEKLLARL 218 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVI------LLGLFATLLQAKGTLRLDKDARP- 288 + ++ R L + I ++I +LG + + +K P Sbjct: 219 LILGD-QNGRELTSLGEGIQYAFNIILQIIDAIYRSMLGKTPEEFRERLICSSEKYYFPL 277 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLL---------------------PLQRIATTNSGEL 327 +LL+++PE HP +N L Q T+S + Sbjct: 278 ILLLDEPEIHQHPYRQRSLMKKINDLLNNKNESFIKLIKGLFNIDGLKGQIFIATHSPNI 337 Query: 328 LSLTPVEHVCRLVRES--SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 L L + R+ +++ + L + + + H + F++ + VE Sbjct: 338 L-LNDYKQFLRIYKDNATQTIKVASGNSFDLDVKLYKHL-LHNFLYLKEATFSKKIIFVE 395 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK-FARRMGIEWHVLVDGDEAGK 444 G+TE I A + D G+ VI+ + + GIE + ++D D+ + Sbjct: 396 GDTENGAIPIFAEKKKFDLDENGVGVIKLDGADSVKYCMELYKLFGIETYAIIDADKK-E 454 Query: 445 KYAATVRSLLNNDREAEREHLTALPALDM 473 +Y +++ E + + D Sbjct: 455 RYHNNANIFFTTEKDYEEDVFASFELKDY 483 >UniRef50_A5FDQ0 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FDQ0_FLAJ1 Length = 793 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 80/532 (15%), Positives = 165/532 (31%), Gaps = 94/532 (17%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + + FR + + + LE +++ +G N GK+S L L E F D Sbjct: 1 MHLKSITVKNFRRLKKTQIDLEKDDSIFVGANNSGKTSATYLLYRFL--EDQKAKFSLHD 58 Query: 60 F----WFPPGDINGRE--------HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 F W D+ E + + L F+ HRV P W G Sbjct: 59 FSSHCWKIFDDLGNSETLLKASEFPSISLDLWFQIQSSDLHRVLDLLP-SLEWQNAPVGA 117 Query: 108 HRI-------------------------------------FYRLEGESAEDGSVMTLR-- 128 + R + L Sbjct: 118 RVEFSVKDVSTLMENYKQAKSKAVANKKEQYHPWPKNLSDYLRKNLNQEFNFKFYVLDFE 177 Query: 129 ----SFLDKDG-HPIDVEDIND-----QARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 F ++G P+ + + D + ++++ + R R+ + N Sbjct: 178 KFDNDFNQEEGYEPLTLGNDTDRSGSKIIKSIIKVDILNAQRHLTDNNSARSEDLSKRMN 237 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAM-VQLLEHYFSEQGAGQARYRLMRRRA 237 + + S+ ++ LS + L+ + G +L+ + A Sbjct: 238 RFYERNLRKKENDYEAMRALDNSEKELTAHLSEVFAPTLQSLNNLGYRGFNDPKLLIKAA 297 Query: 238 SNEQRSWRYLDIINRMIDRP----------GGRSYRVILLGLFATLLQAK-GTLRLDKDA 286 N + + + D P G +I + + A+ ++ Sbjct: 298 LNSEMIASQTKLHYALSDDPELMALPDQYNGLGFKNLIYMVIEILDFHARWMDDEENRAP 357 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELL---SLTPV 333 L++IE+PE LH + V + + Q + +T+S ++ P+ Sbjct: 358 LHLVIIEEPEVHLHAQLQQVFIREIRKVIQKAETSEFFATQVVISTHSPHIIYESGFKPI 417 Query: 334 EHVCRLVRESSRVAAWRLGPSGL----STEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 + R + + + L S + + + +++ FA +LVEG E Sbjct: 418 RYFQREIDDDGHQKSNVLNLSTFYDGSRPKTIKFLQQYMKLTHCDLFFADGTILVEGNVE 477 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 ++ + + +A I +IE + K +G++ ++ D D Sbjct: 478 RLLLPMMINKSASELNASYITIIEVGGAFAHLFKKLINFLGLKCLIITDIDS 529 >UniRef50_Q2BBA4 Predicted ATP-dependent endonuclease of the OLD family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBA4_9BACI Length = 603 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 86/484 (17%), Positives = 162/484 (33%), Gaps = 42/484 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L ++ I F+GI L+L +E +++IG N KS++L+AL S + + Sbjct: 1 MKLTKLTIRNFKGIKELALDVENISIIIGPNNCSKSTVLEALCKFGSSD----TMLEKNL 56 Query: 61 WFPPGDINGREHHLHI-ILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + N H LT E R + P R YRL + Sbjct: 57 YHRHNTSNPVSFHATFSDLTDEEINLHGIRASLHEPTGKFIV-------RAVYRLGEKVE 109 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP----VLRLRDA-RFMRRIRNGTVP 174 + + H + P + +++A ++ Sbjct: 110 RASKLSGNEEHDLGNEGWNGKMGGGKNGTHFLSAFPEVIYIPAVKNANDDIKDSSPYMKT 169 Query: 175 NVPNVEVTARQLDF-----LARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQA 228 + R LD +L N D + I+ + L+ S Sbjct: 170 LYALYKDVIRGLDEYKEAKEKTQLLQDKINSHDNEKIKYFEEEVQGFLKEVTSTTIRFSV 229 Query: 229 RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 + S + + + M+ G R +L + + + Sbjct: 230 DVNPLDEIVSTSLKPNFDFNGLETMLAHQGNGVQRTFMLSILKGFKMYMKKYQGEDKGVN 289 Query: 289 ---LLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLT-PVEHVCRLV 340 ++ IE+PE LHP + V L L Q +AT++S + L+ P + +L Sbjct: 290 RPLIIAIEEPELYLHPHLARVFKETLYSLADEGFFQVLATSHSPNFIDLSKPHRTLAKLS 349 Query: 341 RESSR-VAAWRLGPS--GLSTEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINE 395 + V ++ GL + + + +RFN FA+ +LVEG+TE + Sbjct: 350 LNEDKNVIVSQVNSDIYGLPSHEKDKFQALLRFNPYVNEIFFAKNVILVEGDTEVVALKL 409 Query: 396 LARQC--GHHFDAE---GIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 + + D+E V+ A G + ++ GI++ + D D Sbjct: 410 IGEKLVSSGDLDSEIYNRTSVVNCAGKGTMYVVLNVLNNFGIQYTCIHDFDMTEHNKKGE 469 Query: 450 VRSL 453 ++++ Sbjct: 470 IKTV 473 >UniRef50_A7JZX6 Pathogenesis related protein n=4 Tax=cellular organisms RepID=A7JZX6_VIBSE Length = 714 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 90/594 (15%), Positives = 190/594 (31%), Gaps = 92/594 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + R+EI FR + +L L ++ +++IG+N GK+S+L L L+ +SD +D Sbjct: 1 MKVARIEISNFRLLKSFTLDLEDELSLVIGKNNTGKTSVLACLDK-LAVQSDKKAISYED 59 Query: 60 FWFPP-----------------GDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 F + + L + + + ES L+ Sbjct: 60 FNVDLMSSIEAVLLGEQTIGNEEEYSPLGIQLKLFIKYSESDDLSKISSLIMSLDPVDDN 119 Query: 103 CTDGYHRIFYR-----LEGESAEDGSVMTL--RSFLDKDGHPIDVEDINDQA-----RHL 150 + L+ D R FL ++ + Sbjct: 120 VVLSFEYKIAFDKIVDLKAAYENDAEKFENSPRLFLKENLSDYFGPVVKKSLLKGDESQF 179 Query: 151 VRLMPV-LRLRDARFMRRIRNG-TVPNVPNVEVTARQLDFLARELSSHPQNLSDG-QIRQ 207 + L + L+D ++ I +V N N + + Q L +++ + + + ++ Sbjct: 180 IDLNKENINLKDILSIQFINAKRSVTNKQNDKTLSNQTSSLYKQVDESDEQVDASNEFKK 239 Query: 208 GLSAMVQLLEHYF-----------------SEQGAGQARYRLMRRRASNEQRSWRYLDII 250 L L + S ++ R E + Sbjct: 240 ELRKTDTKLSGIYQNMFKDVIEKVNRFGGISPTDTTIKVASTLQHRELLEGNTTVMYQHQ 299 Query: 251 NRMIDRP--GGRSYRVILLGLFATLLQA--KGTLRLDKDARPLLLIEDPETRLHPIMLSV 306 + + G +I + +L + + +L+ LL IE+PE HP M V Sbjct: 300 SHDLPEHYNGLGYMNLISMIFEIEMLMSRLRKSLKEQPATINLLFIEEPEAHTHPQMQYV 359 Query: 307 AWHLLNLL-------------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 + L LQ I TT+S ++S + + + L +E Sbjct: 360 FIKNIKKLLKENRIREDGIEIHLQSIITTHSSHIVSESSFDDIKYLKKEPQSHQVQAKNL 419 Query: 354 SGLS---------------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L + R + ++ NR FA + +EG+TE ++ + + Sbjct: 420 KDLELEYSSKEDPEKDAELKQSYRFLKQYLTLNRAELFFADKAIFIEGDTERVILPAMMK 479 Query: 399 QCG--------HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV 450 + ++ I +IE + + KF +G++ ++ D D + Sbjct: 480 KIDQENEVDNMQPLLSQNISMIEV-GAHSQTFEKFIDFIGLKSLIITDIDSNKEVPKDDD 538 Query: 451 RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + ++ E + + F + D + ++ +++ K + Sbjct: 539 PTKTKREKCRPNETGASQTSNSSLEFFFGTKELDFYKTLSFSGKSLSKCPEKKL 592 >UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Streptococcus pneumoniae SP6-BS73 RepID=A5LKV6_STRPN Length = 585 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 96/494 (19%), Positives = 178/494 (36%), Gaps = 42/494 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +++ I FR + + + L NV+ G N GK++LL A+ LL F + D+ Sbjct: 1 MEFKKLVIENFRNFSSIEVALSNKNVIFGMNDSGKTNLLFAIRYLLDRTIRNKGFIKSDY 60 Query: 61 WFPPGDINGREHHLHIILTFR------ESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + L + L+ R ESL H + + I Sbjct: 61 HR-HDTSRPIKIQLELDLSDRKMEGDEESLKSSHSRLLISTVAGARNNSSLDTFFISLEA 119 Query: 115 EGESAE--DGSVMTLRSFLDKDGHPIDV---EDINDQARHLVRLMPVLRLRDARFMRRIR 169 E V++ S LD DI+ + +V + P + L F +R R Sbjct: 120 VYNEKELFGNPVLSWGSTLDNLVEVPQYGTRSDIDKIFQ-IVYVNPAIEL--DSFFKRNR 176 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 + + + + + + +N+S+ + + + QL E Y S R Sbjct: 177 RILFSDDSKTDEDVKLEEEIENNIEKLNENISNLHLITSVQS--QLTEAYKSY------R 228 Query: 230 YRLMRRRASNEQRSWRYLDIINRMID-------RPGGRSYRVILLGLFATLLQAKGTLRL 282 + + +E YLD + I+ P R LL L ++ Sbjct: 229 KENLEIKIQSEISISGYLDNLTPYINWNDDTHNYPTSGDGRKKLLSYAINHLISEKQYNK 288 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLL--NLLPLQRIATTNSGELLSLTPVEHVCRLV 340 + LIE+PE LH + L + TT+S E+L + ++ Sbjct: 289 KVI---IYLIEEPENSLHRSVQISLSKQLFVQNIYEYFFLTTHSAEVLYEMDNTQLIKIT 345 Query: 341 RESSRVA--AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + + P+ S + + + S+F LLVEG +E ++ + + Sbjct: 346 NQQDATGQSVYYTVPNEFS-----NLKKKLNKSLAQSIFYDRILLVEGPSEYYLFSAIFE 400 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDR 458 +F+A+G +++ KP + + +GI++ + D D + V S + +R Sbjct: 401 YVSPNFEADGKYLLQVDGINFKPYSELYKALGIDFWIKTDNDLKASRGDKHVFSPIGLNR 460 Query: 459 EAEREHLTALPALD 472 + +A P LD Sbjct: 461 CIDLLDHSATPILD 474 >UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanocaldococcus jannaschii RepID=Y3535_METJA Length = 630 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 82/533 (15%), Positives = 186/533 (34%), Gaps = 51/533 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E+V+I FR I L++ + VLIG+N+ GK+S+L+ + ++ E++ Sbjct: 1 MKIEQVKIENFRSIYDLTVEFGKVTVLIGKNSSGKTSILNVIRIIFENLDTNST-EKNLN 59 Query: 61 WFPPGDINGREHHLHIILTFRESLP---------GRHRVRRYRPLEACWTPCTDGYHRIF 111 + N ++ + ++ P + R + + + Sbjct: 60 ITTITEQNLKDQIRRLWFYTYQNYPIKLAVWLNFDEGEGDKLREVCGL----ESNVKKAY 115 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR---- 167 + ES + + L++ + + + + + + + + Sbjct: 116 IEVSIESNNNQIIWKLQNVIIFGYVSETSKIAKEALKKMKEIHSKVTGHNIESKTGDSLV 175 Query: 168 ----IRNGTVPNVPNVEVTARQLDFLARELSSHPQ--NLSDGQIRQGLSA--MVQLLEHY 219 + +GT+ N + + +++ P+ + + I+ + + L + Sbjct: 176 PCVIVESGTIKNKDVFNIFIDLIKNKICYVNTFPEIYKMVNIPIKGLFAHPMVSSELINV 235 Query: 220 FSEQGAGQARYRLMR---RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 AR R++ R ++ D + G S L G ++ Sbjct: 236 IKNTIKDFARLRMLYDCLREIKGSVDTYEQPDRTEILTKSYEGMSLNYELFGSGDQIIDG 295 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSLTP 332 + K + LIE+PE LHP + +L L +Q I T+S + ++ Sbjct: 296 ILASIISKGKHHIFLIEEPEIHLHPAYIRRLARVLEDLANNLNVQLIIVTHSPDFIATLK 355 Query: 333 VEHVCRLVRESSRVAAWRLGPSGL----------STEDSRRISFHIRFNRPSSLFARCWL 382 + VR+ S + P+ L + S ++ + LF+ + Sbjct: 356 DKRFVIGVRKDSIKINFEGYPTELLATRIFYPFRGSRLSESLARDLGVVPGYFLFSDVAI 415 Query: 383 LVEGETETWVINELARQC---GHHFDAEGIKVIEFAQSGLKPLVKFAR-RMGIEWHVLVD 438 LVEG ++ ++ + +I +AQ LK ++K + GI+ ++ D Sbjct: 416 LVEGNSDRIILQGYIDLLIEQLKNLPKFSYIIIPYAQRSLKEMIKVFKEDYGIKVFLIAD 475 Query: 439 GDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 DE G K + + E + + D+ ++ + F + + Sbjct: 476 NDEEGLKNVKIAKDMG----LRENFEVFIIEKKDILGYIKPEDFILALDELLR 524 >UniRef50_D2RJW4 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJW4_ACIFE Length = 552 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 95/538 (17%), Positives = 172/538 (31%), Gaps = 87/538 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L + I +R +++ N L+GEN GKS L L+ + + + +D Sbjct: 1 MYLSSMRIQNYRNFKDITMTFHPLANYLVGENDIGKSGFLRLLSYMANA----WTLPEND 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + D + + + L +S P + T H R+ E Sbjct: 57 Y-----DDPKQPIRITLDLHLLQS-PNEYFA------------DTPQDHPEKIRVRLEMK 98 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 L + G + +E I + + + A + R Sbjct: 99 VTDICPHLYD--GETGQEMPLETIRRL--RYISYSAISQEDQAVRPQVYRALEKCLAQWE 154 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 L R+ H N+ + + E +R R Sbjct: 155 ASHCGPLPEEERQFIQHEVNV-------------GYFDSSYYECIFYLSRILCRSNRHRA 201 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL-IEDPETR 298 + + L + R+I + ++ + + ++ ++G L PL++ I++PE Sbjct: 202 DNLKFISLAAL-RIITQVYQMAHSLSVPLEHTIIVDSQGKRYL-----PLIISIDEPEIH 255 Query: 299 LHPIMLSVAWHL---------------------LNLLPLQRIATTNSGELLSLTPVEHVC 337 LHP M L+ L Q T+S + L + ++ Sbjct: 256 LHPYMQRSILQYYQQLLNNEDPQFCALLKDLFGLDGLRGQLFVVTHSTDSL-IDDYRNIL 314 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPS---SLFARCWLLVEGETETWVIN 394 RL + + G S +R I H+ + P +L+AR +LVEGETE Sbjct: 315 RLYHDRRGLV---KAACGASFHVNREIEKHLIMHFPEVKEALYARSVILVEGETEYGCFQ 371 Query: 395 ELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 R G FD GI +I S + + K + L D D K+ + + Sbjct: 372 LFGRTVGVPFDYYGICLINARGESSIAKIKKLLEYFRLPVVALYDADV--KEAHKREKGV 429 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP-ENVPMNLRKIISKAIHR 510 D +D+ M ++G R+ + ++ KA H+ Sbjct: 430 YFTD--------GVCFEMDLSQTMLQRGKRQALDRIIDVACGGTGRTSYDMVKKACHK 479 >UniRef50_A8FWW1 ATP-dependent endonuclease of the OLD family n=3 Tax=Gammaproteobacteria RepID=A8FWW1_SHESH Length = 607 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 99/569 (17%), Positives = 196/569 (34%), Gaps = 99/569 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+++ I FRGI + LE L+G N GKS++L+A+ L+L + + +D+ Sbjct: 1 MKLKKLIINNFRGIGFAEIDLENFTTLVGPNNIGKSTILNAIHLVLDNKKP----KLEDW 56 Query: 61 WFPPGDINGREHHLHIILTFRESLPGR----------HRVRRYRPLEACWTPCTDGYHRI 110 E + II F + H + ACW Y Sbjct: 57 ----PAQQASEEVMDIICEFGDLEDWEKRKSAISTLLHEDYLKVKMSACWNAEQTDYSYE 112 Query: 111 F------------------------------------------YRLEGESAEDGSVMTLR 128 + ++E ES ++ L Sbjct: 113 YSVYCVETQYPWSELNFTKAKADEVCKPIFKELGITKAAEFNERQVELESYIAENLPELV 172 Query: 129 SFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD-------ARFMRRIRNGTVPNVPNVEV 181 S + + H++ + ++ D + F N P V E Sbjct: 173 SSVKDWHVKKFANSLQQAVPHVMYVPASFKIEDELKATNNSPFSFLFTNKLFPKVKGDES 232 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 + ++ DG +GL + + ++ ++ +L E Sbjct: 233 YSAYIEKATELQDKLKGKAEDGSEIEGLGDALGEVSKTLNQILDFDSKVKLAVGDIDVEP 292 Query: 242 RSWRYL-----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 + D I + G R + + + + +++ D+ ++L E+PE Sbjct: 293 LFMKAATFLIDDEIETSLQYQGSGVQRALAFAMLEANAEVESSVQGDQRTV-VVLYEEPE 351 Query: 297 TRLHPIMLSVAWHLL----NLLPLQRIATTNSGELLSLTPVEHVCRLVRES--SRVAAWR 350 +HP ++ + L Q I +T+S L+++ +L++++ + A + Sbjct: 352 LYIHPHLMRRLKNTLQTRSESPKWQVICSTHSPFLINIADKPESLKLIKKNAGNARAVHQ 411 Query: 351 LGPSGLST----EDSRRISFHIRFNR--PSSLFARCWLLVEGETETWV---INELARQCG 401 + + T + + + F+ SLFA+ ++VEG+TE V I+ELA + Sbjct: 412 VSSTIFETTEDYNERDILRAALDFHPTVCESLFAKRVVIVEGDTEVAVFSMISELANKLD 471 Query: 402 H--HFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYA-----ATVRSL 453 D + VI + L+K + I++ V+ D D A A + Sbjct: 472 VQDSLDKD-TTVISAGGKWTITALIKVLNALKIDYRVIHDTDRKNLSDAELLEKAAIHPF 530 Query: 454 LNNDREAEREHLTALPALD--MEHFMYRQ 480 N + A + ++ +D EH ++ Q Sbjct: 531 KANAKIASVANAGSVFLVDDTFEHVLWDQ 559 >UniRef50_Q3B1R7 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B1R7_PELLD Length = 595 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 93/477 (19%), Positives = 164/477 (34%), Gaps = 40/477 (8%) Query: 1 MI-LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L R+ I FR ++ L +G N GKS+LL A+ ++P + E D Sbjct: 1 MYTLSRISISNFRSCQQVDFALAAFTPFVGYNNAGKSNLLAAIRWFIAP----FALEAAD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + I + + L +HR R +E G R L A Sbjct: 57 FNQLSLPVVVEGEINGITASLLDRLDVKHRSR----IEPLLM--DGGLLRFRRELSSPGA 110 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP----VLRLRD-ARFMRRIRNGTVP 174 +V+++ + D + A L L P + + D A ++++ Sbjct: 111 ASTAVLSIWNVSAGDSGEWVINPTG-IAAALKALFPEPVVIGAMEDAAEDSSKVKSSNTI 169 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDG----------QIRQGLSAMVQLLEHYFSEQG 224 E + D + +L++ +L +++ +L YF Sbjct: 170 GKLLAEFSVALEDAHSGQLATVLADLRSSFNANGGSRSVTLQRFDEEATSVLRDYFPGVA 229 Query: 225 AGQARY-RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL--R 281 M R G + R I + + L + + Sbjct: 230 LHLEIPVPEMGALLKGATVKVSEAGGEARDFSCLGHGAQRSIQMSMIQYLAEVRERAVGS 289 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEHVCR 338 + + LL+I++PE LHP + L L Q + TT+S ++ V + R Sbjct: 290 GSEPGQRLLIIDEPELFLHPQAIEQVREALKRLSRNGCQVLFTTHSPLMIDRESVPN-TR 348 Query: 339 LVRESSRVAAWRLGPSGLS---TEDSRRISFHIRF-NRPSSLFARCWLLVEGETETWVIN 394 LVR+ S + L +D R+ + N LFA LLVEG TET V+ Sbjct: 349 LVRKGSSTTVASTLETVLQRYVNDDGSRLQTLLDLKNAKEWLFADRALLVEGITETRVLP 408 Query: 395 ELARQC-GHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 L + G + + +++ + + + MG+ + D D K ++ Sbjct: 409 VLVQAVTGKSLGSRSVALVQVDGGAAVSDCMNVLGAMGMTCFAIADLDYVLDKAPSS 465 >UniRef50_B0QUR6 Predicted ATP-dependent endonuclease of the OLD family protein n=2 Tax=Haemophilus parasuis RepID=B0QUR6_HAEPR Length = 582 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 81/533 (15%), Positives = 157/533 (29%), Gaps = 86/533 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L ++ I FR I+ + + + +L+G N GKS+++ AL E + + + Sbjct: 1 MKLRKIHIKNFRSIHDVEIEVHNYTMLVGANNAGKSNIMAALRAFY--EDVAWTKDDEPK 58 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + N E + L F E + + + + + Sbjct: 59 FNSSVLENEIEVESWVELKF-ELTDNEWN-ALADKYKGTKEKHLTVRKYFISKEKVKPRQ 116 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL-------------RLRDARFMRR 167 + +D+ ++I + +P LRD + Sbjct: 117 SNIYGIVDGVIDESLF-YGAKNIGSAKLGQIIYIPAFISASEQMKTSGASPLRDMLNLML 175 Query: 168 IRNG-TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + P V + + + A+ + +++ I +S+ + Sbjct: 176 KKALVNSPAYQKVITSFDEFNDEAKNKNGFLDQIAN-PINSAISSWGIKFDMSIGAISPE 234 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 L+R + L +DR G R L L + + ++ Sbjct: 235 DITKNLIRHSFVDSMLGDYALS-----LDRYGHGFQRSFLYELIKLVPEISNENNTTQEK 289 Query: 287 R------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLT--PVE 334 L+L E+PE LHP + L L Q I T++S + + Sbjct: 290 NDFNPDFTLILFEEPEAFLHPTQQENMAYHLRRLGEGNEQQVIITSHSPIFVGKATDSLC 349 Query: 335 HVCRLVRESSRVAAWRLGPSGLS------------------------------------- 357 + R+ ++ + ++ L Sbjct: 350 QIGRVHKKDGLTSLGQIKLEELGNIFSSGLDFKICLQNFVNNANIPDDRKKTAKELLKNS 409 Query: 358 --------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAE 407 + R + R S FA LLVEG TE + N L H F Sbjct: 410 EQNNEIEIQNEKFRYQLWLDSERSSMFFADKVLLVEGPTEKALFNWLLANNHDWHTFTKH 469 Query: 408 GIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 I V++ + GI + +++D D+ K + + +L N Sbjct: 470 RIAVVDVIGKFNFHRYMTLLDIFGIPYGLILD-DDLNKNHHQAINDMLKNYDC 521 >UniRef50_A4AD51 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AD51_9GAMM Length = 617 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 81/450 (18%), Positives = 154/450 (34%), Gaps = 38/450 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++I +R I L+ L+ +L G N GKS++L A+TL S S Sbjct: 1 MRITNLKIKNYRSIESLNTRLDSLTMLCGPNGSGKSNILKAITLAFSDISLDKRVVGQFV 60 Query: 61 WFPPGDINGREHH-LHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + L F + P+ I Y+ + Sbjct: 61 RDNITKSKLNSSASIQVELWFSD-----------APISVLAIAQETKVKPIVYKFK--LT 107 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + G+V K G ++ + ++ + +RD + Sbjct: 108 KSGNVT------RKLGRIELDDESFKKLSEKFSIVYIPTIRD--LENDGLRPFLELFKKT 159 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 TAR L R L+ LS A + L E Q AR + Sbjct: 160 IQTARGGRELTRHLTDIKTTLSK-------KAALILGEQKAVVQNILNARAIELSTAEIE 212 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + L + + R + A ++ + + L E+P+ L Sbjct: 213 LDDLYDNLKLQIKDSSRNTLPMEYLGTGHQSAVIINLYKQFGENSPGQTTYLFEEPDAHL 272 Query: 300 HPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGL 356 HP + L+ + + Q + +T+S LLS +E L + ++ SGL Sbjct: 273 HPPTIRAIGSQLDQISISSQVVVSTHSPILLSQLGLEKALHLKIDNNTGTKVADSNLSGL 332 Query: 357 STEDSRR--ISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIE 413 S + + +R +LF++ ++VEG T+ V+ L + G D + ++ Sbjct: 333 SQTQLNHRLLKYGLRVT--EALFSKLVVIVEGGTDAIVVGRLIEIRSGKSSDQMDLLLVP 390 Query: 414 FAQS-GLKPLVKFARRMGIEWHVLVDGDEA 442 + + + +++G++W + D D A Sbjct: 391 ATGKENIVDIAEILQKLGVKWIAIFDFDAA 420 >UniRef50_C7PFH0 ATP-dependent endonuclease, OLD family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFH0_CHIPD Length = 780 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 81/536 (15%), Positives = 159/536 (29%), Gaps = 94/536 (17%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + I +R + + + + + + +G N GK+S LS ++D F D Sbjct: 1 MYLKTICIKNYRRLKDVKINIQKDTTIFVGANNSGKTSATHIFQSFLSGKAD---FSLHD 57 Query: 60 FWFPP-------------GDINGREHHLHIILTF--RESLPG------------------ 86 F + + + + L F E Sbjct: 58 FSVDCWKLIKDISQSTNIVEDIYKLPTISLDLWFEVSEDDLNYIIDLLPNLDWASQPVGI 117 Query: 87 ---------RHRVRRYRPLEACWTP---------CTDGYHRIFYRLEGESAEDGSVMTLR 128 + + Y+ +A D + RL E + V+ Sbjct: 118 RLMYAPKGHDNLLLEYQTAKADAQKKGKDMFQPWPKDLSDYLTKRLNQEYEINYFVLDAT 177 Query: 129 SF------LDKDGHPIDVEDIND-------QARHLVRLMPVLRLRD-ARFMRRIRNGTVP 174 F +D P + + D R L+++ + R + + R+ + Sbjct: 178 QFDRNYNIIDPSYTPHALHEDKDNKKTGAAIIRSLIKVDFLNAQRHLSDNISTGRSEDLS 237 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 N S+ + Q L + Q ++ G + Sbjct: 238 KRFNRFYDRNLEKRENDPEIYKALFDSESLLTQHLEKVFQPTLDSLNKLGYPGFTNPKLV 297 Query: 235 RRASNEQRSWRYLDIINRMIDR-------PGGRSYRVILLGLFATLLQAKGTLRLDKDA- 286 +A+ Q S ++ I G +I + + + D A Sbjct: 298 IKAAYSQESVSQYAQLHYSIGDLDLPDKYNGLGFKNLIYMVIEILDFHERWKEDTDTKAP 357 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELL---SLTPV 333 L+LIE+PE LH + V + + Q I +T+S ++ P+ Sbjct: 358 LHLILIEEPEAHLHAQLQQVFIRQILNIINPSGQNDGFNTQLIVSTHSPHIIYESGFLPI 417 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRR----ISFHIRFNRPSSLFARCWLLVEGETE 389 + R S + L S E + + +++ FA +LVEG E Sbjct: 418 RYFRRTSEVSKSPVSEVLNLSTFYNESEKDSREFLEKYMKLTHCDLFFADAAILVEGNVE 477 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 ++ + +C + + VIE + + +G+ V+ D D Sbjct: 478 RLLLPLMIEKCQKSLQSNYLSVIEVGGAFAYRFEQLISFLGLTTLVITDLDSVFPP 533 >UniRef50_B4S792 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S792_PROA2 Length = 579 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 99/565 (17%), Positives = 201/565 (35%), Gaps = 75/565 (13%) Query: 2 ILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 L + + FR I+ + + L+ VL+G N GKSS+L A +++ S DD Sbjct: 24 RLHKFIVKNFRAISSQPVEIELDDIVVLVGPNNAGKSSILRAYEIVMQHGSKDGRLTIDD 83 Query: 60 FWFPPGD-INGREHHLHIILTFRESLPG--RHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 F D N E LH I+ + + W + + Sbjct: 84 FPEGVVDPDNLPEVELHTIIYDKAPGDRWIHKTADSEWLIREQWVWDSPNKDPKRRGFDV 143 Query: 117 ES-AEDGSVMTLRSFLDKDGHPID-----VEDINDQARHLVRLMPVLRLRDARFMRRIRN 170 E D V + P+ + QA + +L+ +L+D + I++ Sbjct: 144 EKDDWDDQVPWGAPNVANARRPLPHRIDAFASPDTQATEIAKLV-TSKLKDK--ITTIKS 200 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + ++ ++ L ++ + + + + + + Y + Sbjct: 201 DPEQEESDYDLVLAKIKALQTKVVEATE--------EEIEVIEKDISGYLEKIFPNHKVK 252 Query: 231 RLMRRRASNEQRSWRYLDIINRM----------IDRPGGRSYRVILLGLFATLLQAKGTL 280 + E+ + + + I G + R +L L +A Sbjct: 253 FDAKPETDIEKTYTPFKSNADVLLGPEGGYFSEIAHQGSGARRTLLWATLKYLSEAND-- 310 Query: 281 RLDKDARP-LLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVE- 334 + ARP +LL+++PE LHP + A +L LP Q + T++S + L+ Sbjct: 311 --GEGARPHVLLLDEPEICLHPSAIREARSVLYELPSAGNWQVMITSHSPIFIDLSHDNT 368 Query: 335 HVCRLVRESS----RVAAWRLGPSGLSTEDSRRISF------HIRFNRPSSLFARCWLLV 384 V R+ R+ S +R + LS +D + + ++ F ++V Sbjct: 369 TVIRVSRDESAKVRSTTLFRPSRAKLSDDDKKNMKLLNICDPYVH----EFFFGGKQVIV 424 Query: 385 EGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGD--- 440 EG+TE + L H D + +++I G+ P + + + + +L D D Sbjct: 425 EGDTEYTAFSLLRSL--HPEDYKDVQIIRARGKGVIPSVARVLLQFSKSFSILHDTDTEL 482 Query: 441 -EAGKKYAA-----TVRSLLNNDREAEREHLTAL-----PALDMEHFMYRQGFSDVFHRM 489 GK A +++ +L + E HL A A+ E + +S + Sbjct: 483 TATGKANPAWGMNNSIKDILGWENAGEAVHLVACKTCFETAMFGEEVKTEKPYSALSR-- 540 Query: 490 AQIPENVPMNLRKIISKAIHRSSKP 514 + + N+++++ + + P Sbjct: 541 VRTDGDARKNVKQLLDSLLDPTLDP 565 >UniRef50_A3Y2D0 Predicted ATP-dependent endonuclease, OLD family protein n=3 Tax=Bacteria RepID=A3Y2D0_9VIBR Length = 651 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 98/636 (15%), Positives = 200/636 (31%), Gaps = 122/636 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLL----SPESDLYHFE 56 M +E + + FR +++L+ + +G N GKS++++AL + ++DL Sbjct: 1 MKIESIRVKNFRSFKDETILLDDYSCFVGSNGAGKSTVMNALNVFFRQFRDSKTDLSKLS 60 Query: 57 RDDFWFPPGDINGREHHLHIILTFRE-SLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 ++DF + + I +TF S + + Y Y R + Sbjct: 61 KEDFHHKNT-----QLPIEITVTFNSLSAEAKSDLADYVRQGKLIVTAKAEYDPATERAD 115 Query: 116 GESAEDGSVMTL-RSFLDKDGHP------------------------------IDVEDIN 144 + + V++ ++ D + + + D Sbjct: 116 VKQYGNRMVISGFSAWFDANKQKAKVPELKAIYQNLKNTFSGLADVKTKGDMEVALHDYE 175 Query: 145 DQARHLVRLMPVLRLRDARF--MRRIRNGTVPNVPNVEVTAR-------------QLDFL 189 + L L+P + +F + N P + V V+A LD L Sbjct: 176 AKNPQLCTLVP----SEDQFYGASKGANKIAPYLEWVFVSASKDFSEEAEQTKGSALDQL 231 Query: 190 ARELSSH--------PQNLSDGQI--RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS- 238 + Q + +I ++ L L+ G ++ A Sbjct: 232 LNRVLGTKVTFKDKVSQLKEEYRISYKKMLEEEQPALQEISDSLGIKLKKWSNPDASAQI 291 Query: 239 ----NEQRSWRYLDI----------INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 + ++S + + + R G R LL + L A K Sbjct: 292 VWNEDPEKSVKIEEPKALVVISEKGFEGELSRFGHGMQRSYLLSVLQELSDAN----TAK 347 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLL-PLQRIATTNSGELLSLTPVEHVCRLVRES 343 ++ +E+PE HP LL L Q + T+S + + E + R+VRE Sbjct: 348 SPTLVIAVEEPELYQHPPQARYLAQLLQELDDSQVMVCTHSPYFIPVERFEDL-RVVREE 406 Query: 344 S-------RVAAWRLGPSGLST------EDSRRISFHIRFNRPSS---LFARCWLLVEGE 387 + ++ L ++ ++ +P F + +LVEG Sbjct: 407 GVPCESKVKSVTYKKLSDTLHGSGQVLLRETGMLAKLYPNLKPEINEMFFCKKLILVEGI 466 Query: 388 TETWVINELARQCGH--HFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGK 444 + I G F G +I L + + +GI+ +V+ D D Sbjct: 467 EDVAYIRTYIELMGKTDEFRLGGFHIIPVGGKSELLKPIALTKHLGIDVYVVCDAD---- 522 Query: 445 KYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 T +++ + ++++ + L L + ++ + F + N+ + I Sbjct: 523 ----TNKTVEGEVVKHKKDNASILHLLGHDKALHWSEETHRFSNLTMWTHNITVT----I 574 Query: 505 SKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 K A +G+ P + K Sbjct: 575 GPEFGPKWKGFEDKAAAHYGNAKGLKKNPLAVSKAL 610 >UniRef50_Q11KX7 ATP-dependent endonuclease of the OLD family-like n=6 Tax=Bacteria RepID=Q11KX7_MESSB Length = 615 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 88/603 (14%), Positives = 180/603 (29%), Gaps = 72/603 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + R++I FRG+++ + + +L+G N GKS++ +AL L+L PE + Sbjct: 1 MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEH 60 Query: 59 DFWFP-PGDINGREHHLHIILTFRESLP------GRHRVRRYRPLEACWTPCTDGYHR-- 109 DF +G + I + G H R +G + Sbjct: 61 DFHCGRYLTEDGAPVEIRIEAILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQAD 120 Query: 110 -------IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR---- 158 + G D +F D +D D + + +P R Sbjct: 121 APGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALDEETEIKLGQGRVPFTRVHKR 180 Query: 159 ---------LRDARFMRRIRNGTVPNVPNVEVTARQLD---FLARELSSHPQNLSDGQIR 206 LR ++ G++ + + ++ L + + + + Sbjct: 181 LCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL 240 Query: 207 QGLSA-----MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID--RPGG 259 + + A M + + + L R R + ++ R G Sbjct: 241 KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGT 300 Query: 260 RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRI 319 S +++ L + + K + + +E+PE L P + Q I Sbjct: 301 GSINLLVFALLTFIAELKDKQSV------IFAMEEPEIALPPHTQRRVTRFVLAEMGQSI 354 Query: 320 ATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFAR 379 T++S ++ + L R+ + + + R ++ +R Sbjct: 355 VTSHSPYVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTERR---QFAEAILSR 411 Query: 380 CWLLVEGETETWVINELARQCG--------HHFDAEGIKVIEFAQSGLKP-LVKFARRMG 430 L+VEG TE + + HFD G+ V + P +G Sbjct: 412 AVLVVEGSTEASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALG 471 Query: 431 IEWHVLVDGDEA--GKKYAATVRSLLNNDREAEREHLTALPA--------LDMEHFMYRQ 480 D A G+ ++S E+ L + R Sbjct: 472 KLAFGFYDKPNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRS 531 Query: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 + V + L + KA + A+ +A + +P ++++ Sbjct: 532 DYPAVGAYDPAAGDADAAALATKVLKARKGEAYGYAAMLIAQ---CQTAAELPATIREIL 588 Query: 541 SRV 543 + Sbjct: 589 EAI 591 >UniRef50_Q1WRW0 Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WRW0_LACS1 Length = 679 Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 74/517 (14%), Positives = 168/517 (32%), Gaps = 74/517 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQ------NNVLIGENAWGKSSLLDALTLLLSPESDL-- 52 M L V++ +R + + L+L++ +++IG+N GK+S L + +++ + L Sbjct: 1 MYLNEVKVKNYRSLKDVKLVLDKEKGTPNLSLIIGKNNSGKTSFLKIMKKMIAEDRKLSW 60 Query: 53 ------YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRY-----RPLEACWT 101 Y E + + N + I+ + E +E Sbjct: 61 DDFNIQYRREIHNILVSKEEGNEEDIEGIILDLYMEYDDNDDLNNILPLMLDLNMENNIV 120 Query: 102 PCTDGYHRIFYRLEG--ESAEDGSVMTLRSFLD---------------KDGHPIDVEDIN 144 I +++E D + R F D G+ + ++ Sbjct: 121 VLEFKCQPIIHKIEELRNLVNDTELKEYRKFSDFMQENLNKYFETNVYARGYDYESHELT 180 Query: 145 D--------QARHLVRLMPVLRLRDARFMRRIRNGTV---PNVPNVEVTARQLDFLAREL 193 D + ++ + + RD + R + N ++ L E+ Sbjct: 181 DAIEKLDSSIVKKIINITGISAKRDTSNNEKDRTLSQIAAKYYENFSDEEDKIRSLREEV 240 Query: 194 SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR----YRLMRRRASNEQRSWRYLDI 249 S L+ + + ++ ++ + + + + D Sbjct: 241 SKTDGILNK-EYNKLFKDVIDDFRNFGNFPNGEEDVNIHSKMDVSKLLKGNTVFSYQYDK 299 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 + + G ++ + K ++ +L IE+PE HP + V Sbjct: 300 EDLPENYNGLGYMNLLGIIFEVKACFQKFRQDSNRSKINILYIEEPEAHTHPQLQYVFIK 359 Query: 310 LL--------NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDS 361 + + L +Q I TT+S ++S E ++E ++ Sbjct: 360 NIGKLIENEKDNLNVQTIITTHSSHIVSQCKFEDTNFFIKEKDNAQIKSYADLENLYKNE 419 Query: 362 RRI----SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH---------FDAEG 408 + + +I +R FA +L+EG+TE ++ + + ++ ++ Sbjct: 420 KEVFEFVKKYITLSRAEIFFADKLILIEGDTERILLPTMMERVDNNKNNGKDVPPLLSQN 479 Query: 409 IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 I V+ + L K + ++ V+ D D G K Sbjct: 480 ISVL-VIGNHAHVLSKLISFLNLKTLVITDIDAKGIK 515 >UniRef50_A9G4V7 Putative old protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G4V7_SORC5 Length = 824 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 91/581 (15%), Positives = 175/581 (30%), Gaps = 108/581 (18%) Query: 1 MILERVEIVGFRGINRLSLMLE----------QNNVLIGENAWGKSSLLDALTLLLSPES 50 M L +V I F+ I LSL + ++GEN GKSS+L+A+ L Sbjct: 1 MRLSQVVIRRFKSIKELSLTIPARDERRQGSADFVSIVGENNVGKSSILEAIRLACPGSG 60 Query: 51 DLY--HFERDDFWFPPGD---------INGREHHLHIILTFRE------SLPGRHRVRRY 93 F D P + +E H + F + + R Sbjct: 61 KPTIDQFRNLDPSIGPIEVELEFDRLTDADKEKHAVRVHLFVDHGVEKYRIKKVWRAPGV 120 Query: 94 RPLEACWTPCTDGYH-RIFYRLEGESAEDGSVMTLRSFLDKD----GHPIDVEDINDQAR 148 P ++P T Y R + L+ ++ ++ +D + ++ R Sbjct: 121 IPESFAYSPDTRQYRFREWPDLKSKAEFANLGAEWKAIVDSADAAGSKKLSKPSKDNYLR 180 Query: 149 HLVRLM-------------------------------PVLRLRDARFMRRIRNGTVPNVP 177 V++ P LR A + V + Sbjct: 181 AAVQMNSPLIEETEPWSPNPGGNLSNLDSVLPTVIWVPALRETGAEADVSEKQSAVRKIV 240 Query: 178 NVEVTA------------RQLDFLARELSSHPQNLSDGQIRQGL-SAMVQLLEHYFSEQG 224 N R + L + +S ++ + + S + +L++ + Sbjct: 241 NALFEQQLSKHDKVIRFRRAAEELEQLFASDGKHKIVASVEAHITSKLKELIDICADLRF 300 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRP-GGRSYRVILLGLFATLLQAKGTLRLD 283 + + +R LD G + R I+L L + + Sbjct: 301 TAPDVTADLAS-----KTEFRVLDGNISTRPEHQGHGAQRSIVLALLQMWAEQLRIIGSS 355 Query: 284 KDARPLLLIEDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLSLTPVEH-VCR 338 +R L LIE+PE LHP M + Q + TT+S L L + Sbjct: 356 DASRTLFLIEEPEIYLHPEMCRRMRDALLRIAQSGIGQVVCTTHSPVFLDLADRHDGIVI 415 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISF-------HIRFNRPSSLFARCWLLVEGETETW 391 + + +S A + ++ + + F +VEG+ E Sbjct: 416 VKKNNSNPVAIQRTRDIFGQDEGDKERRSRLRMLLNFDSAANEVFFTSRVTMVEGDCEIA 475 Query: 392 VINELARQC---------GHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDE 441 ++ +AR+ + + VI P GI++ V+ D D+ Sbjct: 476 ALDAIARRLCHLGEIHWPTYLAARRSVAVINCRGKWTIPAFQVVLNEFGIKYRVVHDEDD 535 Query: 442 AGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGF 482 A + A + ++ + + E ++ + + Sbjct: 536 ADE--ATRANDQIGA--LLPSQNCRLVHRPNFEEQIFGKNW 572 >UniRef50_B0P4C0 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4C0_9CLOT Length = 576 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 75/523 (14%), Positives = 169/523 (32%), Gaps = 65/523 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E V+I FR I + + + ++GEN GK+++L A+ +L+ + F+ Sbjct: 3 MRIEEVKIKNFRSIKSATFRMNKITAVVGENNAGKTAVLRAINAVLNYMDEEMSFKNKTH 62 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + +I ++F E ++ + + ++ Sbjct: 63 QYAVRSNT------YITISFVEVPD------------KVIYKDKIDIDKLVIKFVYKYSK 104 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHL-VRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 D + KDG V+D + ++ + + R + + N V + Sbjct: 105 D----KEQYMYVKDGEEKSVDDEFMKNLSKDIKYVYIPAGRTNKDVSWEENSIFKEVVSN 160 Query: 180 EVTA--RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 + + D ++ ++ + + D + + L Q + + Sbjct: 161 YMYKHTKNRDRISGDVRKVAKKIHDSALTTLEKDINTLY---------MQNQTMDFKFDF 211 Query: 238 SNEQRSWRYLDIINRMIDRPGG----RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 +++ L I ++ G + + A + + L++++ +L IE Sbjct: 212 ADDLDYSVLLKKIKFSLNECGTDYLLKEWGS-GTKSLAVIAMYRANALLEEESI-VLGIE 269 Query: 294 DPETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW 349 +PET LHP H L Q I TT+S L+ E + + R+ + Sbjct: 270 EPETNLHPQAQKRFIHSLRNELHDNETQTIFTTHSTVLVDELQHEDIILIRRKKDSKRGF 329 Query: 350 RLGPSGLSTEDSRRIS-------FHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 + S L + + F++ ++ E + + VI +L Sbjct: 330 KSVLSQLQKNFWEKYGLEEFKHYQFFNYKNSDFFFSKYVVIGESKNDIQVIKKLIESKIQ 389 Query: 403 HFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN------ 455 + A+ + +E + + I + ++VD D V + Sbjct: 390 NVIAD-VSFLELGGIEFLKYPYFLLKELEIPYMMVVDKDVFFDYKNGKVDESRDVKSGLP 448 Query: 456 --NDREAEREHLTALPALDME----HFMYRQGFSDVFHRMAQI 492 + L + D E + QG+ + + Sbjct: 449 KYKYEMKDNIVLKDIFKTDQEMRKIERLNSQGYKKFVDEIKKY 491 >UniRef50_UPI0001BC7DE3 hypothetical protein BacD2_01103 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC7DE3 Length = 589 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 80/592 (13%), Positives = 177/592 (29%), Gaps = 127/592 (21%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDL--YHFER 57 M + V I FR + + ++N + +G N GK+S + A+ L + F Sbjct: 1 MRINHVHIRNFRKLRNCRIDFDENQTIFVGANNSGKTSAMSAIIWFLKGKDRFTTREFTL 60 Query: 58 D-----------------------------------DFWFPPGDINGREHHLHI-ILTFR 81 D W + + + I LT++ Sbjct: 61 TNWIKINELADKWLVFDEVDPLLLTPNQWDDIVPSLDIWIDVSESEAYQVYKIIPSLTWK 120 Query: 82 ESLPGRHRVRRYRPLEACWTPCTDGYHRIF-YRLEGESAEDGSVMTL----RSFLDKDGH 136 + G + +++ + ++ + E E ++ FL+ + + Sbjct: 121 KDSVGVRLRFEPKDIKSLYADYKKEVMKVRNLQASPEYKETRNLKLYPQNMWDFLNHNHN 180 Query: 137 PIDVEDI---------------------NDQARHLVRLMPVLRLRDARFMRRIRNGTVPN 175 + +I D + L+ ++R+ R + N Sbjct: 181 LLAYFNIKYYVLDSEKINHELESEVQVTPDDSLEENPLVDLIRIDSIEAFREFSDPMGKN 240 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY----- 230 +++ ++QL R+ + + G ++ + + + Y + + Sbjct: 241 ESDIDTLSKQLQAYYRQNYTDETIIETGDLKL-MEELSRANTSYDLKLQKSFSMPIGELS 299 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVI------------------LLGLFAT 272 + N S R I I + + L+ ++ Sbjct: 300 NINYPGFQNPSISIRSNVNIVDSISHDSSVQFSIQGKPELSLPEKYNGLGLRNLISIYLK 359 Query: 273 LLQ--------AKGTLRLDKDARPL--LLIEDPETRLHPIMLSVAWH------------- 309 L+Q +K + K P+ + IE+PE LH V Sbjct: 360 LIQFREQWTRNSKNEEDVKKSIEPIHLVFIEEPEAHLHAQAQQVFIRKALEALTNAAENN 419 Query: 310 LLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG-----PSGLSTED- 360 L P Q I +T+S +++ + + R + + + Sbjct: 420 ALKENPNLTTQLIVSTHSNHIVNEVDMNCLRYFRRVLDEIIGIPVSKVVNMSRTFGENEN 479 Query: 361 --SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 + ++ +I+ FA +LVEG E ++ ++ G D I V+E S Sbjct: 480 DTKKFVTRYIKLTHCDIFFADAAILVEGAAERILMPHFIKREG--MDNYYISVMEINGSH 537 Query: 419 LKPLVKFARRMGIEWHVLVDGDE--AGKKYAATVRSLLNNDREAEREHLTAL 468 +++ I ++ D D ++ ++L + +T L Sbjct: 538 AHRFSSLLKKLNILTVIVTDIDAQQEVEEDGKKKKNLAFPKEGKVKRPITIL 589 >UniRef50_Q0HJ47 ATP-dependent endonuclease of the OLD family-like protein n=4 Tax=Proteobacteria RepID=Q0HJ47_SHESM Length = 589 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 88/591 (14%), Positives = 175/591 (29%), Gaps = 86/591 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E + I +R + L + V+IG+N GKS+LL ++ + DF Sbjct: 1 MKIESIWIKNWRSVKEEKLRAQDLMVIIGQNNHGKSNLLSSVLFFFGEVKQ----QDLDF 56 Query: 61 WFPPGDINGREHHLHII----LTFRESLPGRHRVR-----------RYRPL----EACWT 101 + ++ + TF++ L ++ YR W Sbjct: 57 YHGSTELFVEIEFGDLDESDKTTFKKYLTSEGKIVVRKTAFLGGSFEYRGYIENPSEDWL 116 Query: 102 PCTDGYHRIFYRLEGE-----SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPV 156 + L D +T ++ +D I N Q + Sbjct: 117 QEANASAYTNRELASSLPFHPYIPDSGRITKQNIIDAQNEYIQTNMGNIQFSFELETTNF 176 Query: 157 LRLRDARFMRRIRNGTVPNVPNVEVTARQLDFL------ARELSSHPQNLSD-GQIRQGL 209 L L+ +P V D A ++ ++ ++ + ++ L Sbjct: 177 LGLKSVAKGIFGEVYFIPAVKEASDDFSSKDSSVFGKMYADVVALMSEHNNEWKETKEKL 236 Query: 210 SAMVQLLEHYF---SEQGAGQARYRLMRRRASNEQRSWRYL------------------- 247 + L +E + + ++E +W Sbjct: 237 GKLFSTLNKKDREGNENNDRPKQLTDFEKELTDELIAWGAKVDIEVSNPDIESVFKANTQ 296 Query: 248 ----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP--------LLLIEDP 295 D + I R G R + + L + + + + + E+P Sbjct: 297 VWVDDGVRTDIKRKGHGLQRALTVALIQVVAKKAFAEAELAEEQGNRKASNSRYFIFEEP 356 Query: 296 ETRLHPIMLSVAWH---LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRES--SRVAAWR 350 E LHP + L+ Q I T+S L+ + + + + + + Sbjct: 357 ELYLHPQAQRSLFDSFVALSESGSQVILCTHSSGLIDVERYKSIYIATKNDELNGTKVKQ 416 Query: 351 LGPSGLSTEDSRR--ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 + + +S+ I +R FA +L+EG TE V LA++ G Sbjct: 417 CTEDLFEGDSKKDFNLSYWINPDRGELFFASKVVLLEGATEKTVFPLLAKELGV--FKYE 474 Query: 409 IKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKK-----YAATVRSLLNNDREAER 462 +I+ P VK + I + + D D K +A + D Sbjct: 475 YTLIDCGSKDNIPLYVKLMNKFSIPYVAVYDRDHQAHKGVDAIASADRSTQKIVDEIDVN 534 Query: 463 EHLTALPALDMEHF--MYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS 511 + + D+E + G S + ++ I ++ K Sbjct: 535 IGSSVVLENDIEEELGLPNGGSSKPYVALSHITAEGFTVTPQMEQKIRKIY 585 >UniRef50_C9RMQ8 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMQ8_FIBSS Length = 592 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 90/467 (19%), Positives = 148/467 (31%), Gaps = 34/467 (7%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 L R+ I R I R + L LIG N GK+++L + LL+ S + D Sbjct: 7 RLSRITISNLRSIQRETFPLSDFTALIGYNNAGKTNILMGIRWLLANFSLDISYFDDPNH 66 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 + ++ + G + P + T RI L G Sbjct: 67 PVEAEGLFEGITEQVL-----NRLGEEKAAEVEPFLSGTTLRVKKVQRIPGELPGN---- 117 Query: 122 GSVMTLRSFLDKDGHPIDVED----INDQARHLVRLMP-VLRLRDAR----FMRRIRNGT 172 + +F +G +D + R+ P + + D + + + Sbjct: 118 ---IEFWAFCPPNGKR-KGKDWVRVNDKFTAAFNRMFPESIAIWDFEGNQAYTKLMHEIF 173 Query: 173 VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ--ARY 230 P Q+ EL S + +I+ + L F Sbjct: 174 KPLERKFGGELSQVIEQFTELLSPGSDCQAEEIKAFDKEVNSALRPLFPSVRVELDIPVP 233 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 L S + D R I R G S R I + L L + K +R LL Sbjct: 234 TLETFLKSATIKVVDEDDGFERDISRMGAGSQRAIQMALIRYLAEIKKHHNNHYLSRKLL 293 Query: 291 LIEDPETRLHPIM---LSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSR-- 345 LI+ PE LHP + VA L+ Q I T+S ++++ V + + R Sbjct: 294 LIDSPELFLHPQAVELVRVALKNLSNEGYQVIFATHSAQMVTSEDVSTSLLIRKNRERGT 353 Query: 346 --VAAWRLGPSGLSTEDSRRISFHIRFNRP-SSLFARCWLLVEGETETWVINELARQC-G 401 + + ++ + LFA LL EG+TE V+ L + G Sbjct: 354 FMRKRMEDAVRQVVKDAPSQLQMLFSLSNSNELLFADYVLLTEGKTEWRVLPALFERITG 413 Query: 402 HHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYA 447 F ++ + ++ M I +VD D A Sbjct: 414 QSFALIKCALVRQGGVSNTRKSMQVLSAMDIPVRAIVDLDYAFTTAT 460 >UniRef50_A6Y4R5 Putative uncharacterized protein n=1 Tax=Vibrio cholerae RC385 RepID=A6Y4R5_VIBCH Length = 548 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 87/517 (16%), Positives = 173/517 (33%), Gaps = 60/517 (11%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L + I F+GI + ++++ +LIG N KS++LDA S S+ D Sbjct: 1 MKLSALLIENFKGIKSEVKVLIDNVVILIGPNNCRKSTVLDAYEAYFSVGSE---LSVDF 57 Query: 60 FWFPPGDINGREHHLHIILTFRESL--------PGRHRVRRYRPLEACWTPCTDGYHRIF 111 F + + ++ + + W+ + + Sbjct: 58 FHNQNDSLPISITGIFTDISSDDLDSIGQEWLITADPEFGDCAKFKFVWSKADEKAKKFS 117 Query: 112 YRLEGESAEDG------SVMTLRSFLDKDGHP-IDVEDINDQARHLVRLMPVLRLRDARF 164 + + + + G ++++ R + +P + E + + L+ +++ Sbjct: 118 FSNKINAFKPGGGGGWNTILSSRLPMPIRINPTDNTEALEQVVKELISKNAAAKVKQD-- 175 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 ++ + ++ A++++ S ++ + M E + Sbjct: 176 ----KSKVAKIMAEIDALAKEVEAELSSEISSISTSIQTEVDKMFKGMKVTFEAGVGKFD 231 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL----LQAKGTL 280 +A R N + + + G R L TL L KG Sbjct: 232 PEKAIKEGSRFIFEN--------NGSSAPLANQGSGVQRSFLWAAIKTLSSQGLLKKGRT 283 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLT-PVEH 335 + D +LLI++PE +HP ++ A + L Q I TT+S + LT Sbjct: 284 AIAADKPKVLLIDEPEINMHPAVIRSACEAIYALAELDGWQVICTTHSPVFIDLTKDHTT 343 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRP-----SSLFARCWLLVEGETET 390 + ++ + V ++ S S ++ + F NR F LLVEG+TE Sbjct: 344 LIKVSNLVNDVLYYQTDKSAFSPDEKDNLKF---LNRCCPTVNEFFFYDTSLLVEGDTEY 400 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGD----EAGKK 445 + ++ VI P +K + G + + D D GKK Sbjct: 401 LAYQDQIKRHNLGMTH---CVINCRGKANIPTFIKIFDQFGAKAVAIHDLDTKLNSDGKK 457 Query: 446 YAA-TVRSLLNNDREAEREHLTALPA-LDMEHFMYRQ 480 A T+ + +A + L D E + Sbjct: 458 NAMWTINEKIRIAADATNGRVQTLVHVPDFEGDYLDE 494 >UniRef50_C0XXA7 ATP-dependent endonuclease, OLD family n=2 Tax=Burkholderia RepID=C0XXA7_BURPS Length = 616 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 104/633 (16%), Positives = 192/633 (30%), Gaps = 125/633 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES----DLYHFE 56 M L R E+ F+ + SL E VLIGEN GKS++L A+ LS + L+ Sbjct: 1 MRLCRFEVRNFKCVEYASLEWEDLLVLIGENNAGKSTILSAIAAFLSGSAIKDPSLFRRH 60 Query: 57 RDD---------FWFPPGDINGREHHLHIIL----------TFRES----LPGRHRVRRY 93 D + D + + + + E+ G + Y Sbjct: 61 LTDVANAIELIGHFDGLSDEETTQVAVRGRMNGDRWVLKKRYWFEAGEDGESGGWKEALY 120 Query: 94 R-----------PLEACWTPCTDGYHRIFYRL--EGESAEDGSVMTLRSFLDKD------ 134 +A W + Y + L G + + TLR + + Sbjct: 121 SFSGAERFEGWPEADATWNAFPEEYQPLIAALPNRGVRPTNAARETLREAVRRQRPDLVA 180 Query: 135 -------GHPIDVEDINDQARHLVRLMPVLRL----------RDARFMRRIRNGTVPNVP 177 +P + A ++ ++R +DA ++ N V Sbjct: 181 FGAPNWVPNPGGGGNWKSNANSILPRPILVRAVQEASDETNAKDASTYGKLVNLIVERSL 240 Query: 178 NVEVTARQLDFLARELSS--HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 +L E+ + P + + Q + + + +E GQA R Sbjct: 241 AQRPEMVRLQEALDEVLALFRPDEANPQRQAQEVRDLQDRINRSLNEVVGGQALIRTEAP 300 Query: 236 RASNEQRSWRYL------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTL----RLDKD 285 + L I+ + G R +++ L +L A+ + L Sbjct: 301 EIRSMVLPSTSLVIRDVEAGIDTDVGHQGHGLQRTLVITLLQSLADAQAQVVPGAALAPV 360 Query: 286 ARPLLLIEDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLSLT-PVEHVCRLV 340 +LLIE+PE LHP M + + L Q T+S L + + R+ Sbjct: 361 RANILLIEEPELYLHPQMERLMRDVLYRLAEQASTQVACCTHSPVFLDIATKYRAIIRMF 420 Query: 341 RES-SRVAAWRLGPSGLSTEDSRRISFHI------RFNRPSSLFARCWLLVEGETETWVI 393 + AA ++ + + + FA+ +L+E + Sbjct: 421 KTPQGDAAAHQVTQDLFPGQPLQADRQRLNTVARFDPTVNELFFAKRVVLMEEFSAIAAF 480 Query: 394 NELARQCGHHFDAE-----GIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYA 447 A G F+ + +++ P + I + VL D D Sbjct: 481 ERGAELMGL-FERHLRLRREVSLVDCNGKSNIPAFQRVLNAFNIPYRVLHDEDPGNPAEQ 539 Query: 448 ATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKA 507 A +++L + L A D+E + G+ Sbjct: 540 ANNQNILA--LLVAGANQRHLVAPDLEGLL---GYQA----------------------- 571 Query: 508 IHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 R +KP LA+ + +G +P ++ Sbjct: 572 -PRKNKPFLAVSTVEDLHAQGQ--LPAAFREAV 601 >UniRef50_Q64X74 Putative uncharacterized protein n=1 Tax=Bacteroides fragilis RepID=Q64X74_BACFR Length = 529 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 89/567 (15%), Positives = 194/567 (34%), Gaps = 57/567 (10%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++ERV I F+GI + + ++ N+++G N GKS+L++A+ L L + + F Sbjct: 1 MIERVIIENFKGIKKADISFNDKINIIVGNNGIGKSTLIEAMALALGYGINQLEITQYLF 60 Query: 61 WF---PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG------YHRIF 111 D + + I L F + Y T T G + Sbjct: 61 HASTWKEFDDSKVLPEIIIELYF-----NKALSAEYSGKNNSLTLLTSGIRLRIACDNAY 115 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG 171 L E E + ++ D H + + LV P + + N Sbjct: 116 LSLFQEQKEQYRHIPCEFYI-IDRHWFSGDTVKQL---LVPFNPWIIDSSSSTFNNKANQ 171 Query: 172 TVPNVPNVEVTARQLDFLARELSSHPQNLS----DGQIRQGLSAMVQLLEHYFSEQGAGQ 227 + + +++ + + L + ++ +I L+ ++ + F Sbjct: 172 LATRLISHKLSDTERVQVKGCLRALREHFEGDNKVNEINTSLNDKIKDVSPDF------- 224 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + + + I+ ++ + + TLL + ++++ + Sbjct: 225 -------KLTVDLTTKTAWNTILCPVLKEIPFSQIGLGDQCIVNTLLSLDSSNKIERKEK 277 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 LL++E+PE+ L + + L Q TT+S + + + ++ L E ++ Sbjct: 278 -LLIVEEPESHLSHTKMYELLNCLGNFEGQMFITTHSSYVANKLSLSNLLVLGNEEGKIR 336 Query: 348 AWRLGPSGLSTEDSRRISFHIRF-NRPSSLFA--RCWLLVEGETETW-VINELARQCGHH 403 ++ D +F R N P+ A + +LVEG T+ ++ ++ H Sbjct: 337 NQKI-------TDLADYNFFARVPNYPTLRIALCKKAILVEGPTDEMVLLYHFMKEYQCH 389 Query: 404 FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL-LNNDREAER 462 A I++I K + + + ++ D D R + N+ + Sbjct: 390 PFAMDIELISIGGVVFKHFAQLGATLNKQIAIITDNDSLSFDDLIKKRGVDQGNNIKLFS 449 Query: 463 EHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAM 522 E+ ++L +E ++ I V + + + K + A ++ Sbjct: 450 ENDSSLHT--LEPAFVHANAGNIQKLSLLIRGKVQVGETEKQLSDYMKKHKTEWAQKLLE 507 Query: 523 EAGRRGVDSVPTLLKKMFSRVLWLARG 549 VP +K + WL G Sbjct: 508 A--DAYDYDVPQYVKDAVN---WLTNG 529 >UniRef50_Q3IKC8 Putative orphan protein n=3 Tax=Bacteria RepID=Q3IKC8_PSEHT Length = 693 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 79/530 (14%), Positives = 157/530 (29%), Gaps = 90/530 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSP------ESDLY 53 M L + I FR + + + E++ V +G N GK+S LS + + Sbjct: 1 MKLAKAFIRNFRRLEEVEVDFEKSETVFVGPNNSGKTSATSIFRCFLSSRDFKIHDFSIQ 60 Query: 54 HFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT----------PC 103 D + P GDI + + L F R + L + Sbjct: 61 RISEIDHYSPEGDITLPS--IELDLWFDFDPENISFGRAFALLSSVSIETYEVGIRCKYA 118 Query: 104 TDGYHRIFYR---LEGESAEDGSVMTLRSFLDKDGH-----------------------P 137 D +++ + + +L FL DG+ Sbjct: 119 VDDISKLWAEYDTIFPIDDDGKRKRSLSHFLGLDGNFKNHFSVQYSSLSRLDNDEIEETI 178 Query: 138 IDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHP 197 + + D LVR V R+ + + LD + ++ Sbjct: 179 LKLSDGKRILNSLVRADFVDAQRNMNDDEEASRSSKLSTAFASFYRNNLDQVDINDAAIQ 238 Query: 198 QNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYRLMRR----------RASNEQRSWRY 246 + + + + L + G A R ++ R S + Sbjct: 239 IIDENNEKLTEHYDEHFGSLMGVLNNLGVPAAHERRLKIISSISADVALRGSTDLIYIDA 298 Query: 247 LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD-KDARPLLLIEDPETRLHPIMLS 305 G ++L+ + Q + L+ + L+ IE+PE LH + Sbjct: 299 ETAHELPEAYNGLGFKNLVLMAIQIRDFQLQWLQTLENRPLCHLIFIEEPEVHLHAQVQQ 358 Query: 306 V----AWHLLNLLPL------QRIATTNSGELLSLTPVEHVCRLVR----ESSRVAAWRL 351 W++LN L Q + TT+S +L+ E V R E + L Sbjct: 359 TFIGNIWNILNNLDEDGIGSPQLVITTHSSHVLNSVDFEKVRYFRRCHRSEEDPTVSQIL 418 Query: 352 GPSGL-------------------STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 S + + + ++ F+ +L+EG E + Sbjct: 419 RVSEIHNLRDFQASAVSTDGGEVDADAALDFLKRYLALIHCDLFFSDAAILIEGTVERLL 478 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 + ++ + + + + + +E + + + I + V+ D D Sbjct: 479 LPQMITKTSPNLNTKYLATLEVGGAYAHRFAELMTFLHIPYLVITDIDSV 528 >UniRef50_Q8PTL3 Putative uncharacterized protein n=1 Tax=Methanosarcina mazei RepID=Q8PTL3_METMA Length = 782 Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 82/538 (15%), Positives = 176/538 (32%), Gaps = 109/538 (20%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+L V I +RG+ + L L + ++GEN GKSS L AL+L ++ ++D+ Sbjct: 22 MLLNSVRIENYRGLRDICLPLSRFVCIVGENNSGKSSTLLALSLFITGS----KVNKNDY 77 Query: 61 WFPPGDINGREHHLHIILTFRESL----PGRHRVRRY-----RPLEACWTPCTDGYHRIF 111 + + + + + L ES H+ + + + L TD + Sbjct: 78 YD-----STKPVRIEVELNICESDLAKVKDEHKDKIFEIITDKKLTLVRRYETDDSVNLC 132 Query: 112 Y----------------RLEGESAEDGSVMTLRSFLDKD----GHPIDVEDINDQARHLV 151 Y + + + L + + + ++ Sbjct: 133 YKKLMPVDKRFDDSKIAEILSGKKGNEIKTAIMDHLPEYEEFFDEVKTQKGAKEIVDSII 192 Query: 152 RLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSS---------------- 195 + MP+ +L + I + + + + + ++ + Sbjct: 193 KDMPISQLEEKDVKLPIPEAIIKTLMPEPYYIQAVKDINDDVKTKESATFGKIISLFHKE 252 Query: 196 ---------------------HPQNLSDGQIRQGLS---AMVQLLEHYFSEQGAGQARYR 231 + + + + + L + +L+ Y E + Sbjct: 253 IEGSKPVKDIVESFGKITTLFNRPDNRESRPDKRLKEVKDIEKLVNAYLKENFPSSSLEF 312 Query: 232 LMRRRASNEQRSWRYL---DIINRMIDRPGGRSYRVILLGLFATLLQAKG---------- 278 + + S + D +ID G R + L + ++ K Sbjct: 313 YIPPIELKDILSTTQIYIDDGTRGLIDSKGDGLKRAVTFSLLRSYVEMKRRSKLLDSLDS 372 Query: 279 -----TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLT 331 + L L E+PE LHP V + L+++ Q + TT+S S T Sbjct: 373 EEADPQNEENPSQPYLFLFEEPELYLHPAAQKVLFDALSIISESNQVVVTTHSPIFFSST 432 Query: 332 PVEHVCRLVR-ESSRVAAWRLGPS-----GLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 ++ + + + + D ++ + N ++ FA +LVE Sbjct: 433 STNTFIKMKKVYEKDIKPYSASICIDLHNNTTNRDLFQLICY--ENNCAAFFASRVVLVE 490 Query: 386 GETETWVINELARQC--GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGD 440 G+++ + N +A+ F+ + I +I+ G ++ KF IE H ++D D Sbjct: 491 GDSDVYFFNHVAKTLNSDWDFNRKNIPLIKINGKGSVQRYRKFFNAFEIEVHAILDLD 548 >UniRef50_B7H4E2 Overcoming lysogenization defect protein n=1 Tax=Acinetobacter baumannii AB307-0294 RepID=B7H4E2_ACIB3 Length = 568 Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 74/511 (14%), Positives = 157/511 (30%), Gaps = 68/511 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-----NVLIGENAWGKSSLLDALTLLLSPESDLYHF 55 M + +++ FR I L L+ N +++G+N GK+S + E +F Sbjct: 1 MHISSIKVKNFRAIKDAELKLDPNQKQDLTLIVGKNNSGKTSFIMVFDKFFKKED---NF 57 Query: 56 ERDDFWFPPGD----INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 DF + I+ II F E + Y + +++ Sbjct: 58 NFHDFSTHLREKIYKIDSETIEEAIIGLFLEISYSKDDNLEYLSEFIIDLNSKNNTVKLY 117 Query: 112 YR--LEGESAEDG------------------SVMTLRSFLDKDGHPIDVEDINDQARHLV 151 + ++ E + S + ++ + I+ + + Sbjct: 118 FECLIDEERLRNDLINIDKKYKKKFIEKNITSYLIKNLYIYEKDEDIENNKQKLIKKEVS 177 Query: 152 RLMPVL------RLRDARFMRRIRNGTVPNVPNVEV--------TARQLDFLARELSSHP 197 + ++ R+ ++P + + + + Sbjct: 178 AINSLINYQVIHAKRNLASSETKEKSSLPLSKLSTEYFNKENMFSEKDFIKINNAILEMD 237 Query: 198 QNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRP 257 +NL++ + + + R+ SN + + N + + Sbjct: 238 ENLNNL-YDTHFEGFFENVRDFLGSTALKVLSNLESRQIMSNSSKVVQIDSEENFLPESL 296 Query: 258 GGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVA-----WHLLN 312 G IL L L+ + ++ D+ LL IE+PE HP M + + N Sbjct: 297 NGLGNLNILYLLLQIDLKKRFFIQEDRSIN-LLFIEEPEAHTHPQMQYIFSKKIKKIIEN 355 Query: 313 LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL-----GPSGLSTEDSRRISFH 367 + LQ +T+S ++S E + + V L TE + + + Sbjct: 356 IPNLQTFISTHSSHIVSQCNFEDIRYFHNHNGNVKIKNFYLELEEKYKLQTELFKFLKQY 415 Query: 368 IRFNRPSSLFARCWLLVEGETETWVINELARQCG---------HHFDAEGIKVIEFAQSG 418 I FA + +EG +E ++ + ++ I IE A + Sbjct: 416 ITLYSAELFFAEKVIFIEGVSEKILLPYFIKNFDEKNKGKQDYIPISSQNITYIE-AGAN 474 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 K ++ +L D D G + + Sbjct: 475 SKAFQHLLNFFEVKSLILTDIDSVGGENRSA 505 >UniRef50_B2KB28 ATP-dependent endonuclease of the OLD family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB28_ELUMP Length = 578 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 93/549 (16%), Positives = 174/549 (31%), Gaps = 84/549 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLL-----LSPESDLYHF 55 M ++ V I FR I LE ++L GEN GK++ ++AL + + D Sbjct: 1 MKIKNVHIHNFRSILDADFPLESYSILAGENNSGKTTFINALRVFYEDIKFNKAEDFPKM 60 Query: 56 ERDD--FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 E D W I +E L E +R + L + I+ Sbjct: 61 ETSDVESWIEVEFITVQEEQ---DLLKEEYRSADKILRVRKYLASSSIEIKSTQSNIY-- 115 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRIRNGT 172 E+G + T + K+ + +I L R V+ L A ++ I Sbjct: 116 ----GYENGVLSTTLFYGAKNISQAKLGNI-LYIPELSRTEEVMNLSKAASPLKSIVEYV 170 Query: 173 VPNVPNVEVTARQLDFLARELSSHPQNLSDGQ---IRQGLSAMVQLLEHYFSEQGAGQAR 229 + + + +L+ + Q S + I + + L+ + G Sbjct: 171 LGKILKASSSFSELNKAFEVFNKEFQAESSPEGLSINKMKEDINSELKDWGVSLGININA 230 Query: 230 YRLMRRRASNEQRSWRYLDIINRMIDRPGGRS--YRVILLGLFATLLQAKGTLRLDK--- 284 + + + + I+ R I+ L + + + K Sbjct: 231 VSPEVITKNLLSHYLQDSKLGEQEINTSSVGQGLQRHIIYSLIKIASKYQDPKEIKKKDF 290 Query: 285 -DARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLS--LTPVEHVC 337 L+L E+PE LHP + L + Q IATT+S +S + + + Sbjct: 291 SPDFTLILFEEPEAFLHPSQQQILNIDLESIAKGDNEQVIATTHSPIFVSKNINNLPSLI 350 Query: 338 RLVRESS---RVAAWRLGPSGL-------------------------------------- 356 RL RE ++ + L Sbjct: 351 RLSREERNKWETKSFNISKEKLELLLSDNAGLEACFKSTVALPACQEELKKALAKSLASG 410 Query: 357 -------STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 S ++ I + R ++ F++ ++ EG TE ++ L F + I Sbjct: 411 TLEGFSGSDKEIMNICMWLDTERANAFFSKHVIICEGATEKVLLEYLFATHWKDFAKKHI 470 Query: 410 KVI-EFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTAL 468 + + + + +GI V+ D D + V + + + A ++L AL Sbjct: 471 YCLDSLGKFNIHRFINLFDSLGIYHSVVYDSDN-NRGVHEIVNKFIQSKKSAYTQNLLAL 529 Query: 469 PALDMEHFM 477 D+E Sbjct: 530 SG-DVESEF 537 >UniRef50_A6BKR5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6BKR5_9FIRM Length = 716 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 87/644 (13%), Positives = 188/644 (29%), Gaps = 118/644 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++ + +R + S+ ++ +++IG+N GK+SL+ + S DD Sbjct: 1 MEIVKIRVKNYRALKDFSMDWQKTLSLIIGKNNCGKTSLISIMQTFFSEGKGP-GIRYDD 59 Query: 60 FWFPP---------------GDINGREHHLHIILTFRESL-------------PGRHRV- 90 F + + + L + + + ES P H V Sbjct: 60 FNLEFKLRLTDCIACKKSEWDNTDIQGIELFLYIEYNESDNIANISPLLMDLDPDNHMVV 119 Query: 91 -----------------RRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTL----RS 129 +Y + ++F R + +++ Sbjct: 120 LKIEYVLNDINQLKMDYDKYFEKLSSGKKNARNKQQLFERFMRDKSKNYFKTVYKAIKYD 179 Query: 130 FLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFL 189 + + +P ++ HL R++ + + R N T + + + R Sbjct: 180 YTIHECNPDIFTILDKNILHLSRIVSIKSIGAKRETDNKENDTSLSSLSNQYYERVKGEA 239 Query: 190 ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM---------------R 234 + + Q+ + + L F E R+ + Sbjct: 240 GDPVLEEFE----AQLLKTDHELTGLYSKVFEEIVGKVKRFGGTKENETIIQINSTLGRQ 295 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP----LL 290 + G +I + + + A+ DK+ P +L Sbjct: 296 ELIKDNTVMTYKSGDQELPESYNGLGYLNLISIIIQIETIMAEFRCDSDKEKMPADINIL 355 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL-------------PLQRIATTNSGELLSLTPVEHVC 337 IE+PE HP + + + L +Q + TT+S +++ + + Sbjct: 356 FIEEPEAHTHPQLQYIFIKNIKELLREGKKCKDGSDIVVQTLITTHSSHIVAECDFDDIK 415 Query: 338 RLVRESSRVAAW----RLGPSGLSTED-----SRRISFHIRFNRPSSLFARCWLLVEGET 388 R S L D + + ++ N FA +L EG+T Sbjct: 416 YFCRVSPYAVISKNLCSLEAEYKDETDPNNKRYKFLKQYLTLNYAEVFFADKVILYEGDT 475 Query: 389 ETWVINELARQC-------GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 E ++ + R+ G ++ I +I A + + + I+ ++ D D Sbjct: 476 ERILLPAMMRKIDQEEEASGMPLLSQNISIIA-AGANSQLFSPLLAFLDIKTLIITDIDA 534 Query: 442 AGKKYAATVRSLL-----NNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 KK + + L +E+ + + F + +N Sbjct: 535 VKKKEIKGKGTYYVACEVEKGEKTSNHALNYYFKEALEN--WGRNDLTFFKK-----QNA 587 Query: 497 PMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 + I K ++ L I G + P + F Sbjct: 588 RQKVLSYIQKNWQQNEDGKLMIAY-QTKEENGKEYYPRSFEDAF 630 >UniRef50_Q138G7 ATP-dependent endonuclease of the OLD family-like n=2 Tax=Rhizobiales RepID=Q138G7_RHOPS Length = 669 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 81/506 (16%), Positives = 151/506 (29%), Gaps = 104/506 (20%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ +++ FR ++ + L + V +GEN GKS+ +DA+ LL +P + Sbjct: 1 MYLKNMKLNSFRSFDQGEIELQKDLTVFVGENNGGKSNAIDAVRLLTTPLGGRREIYCE- 59 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + F E G+ + + R Sbjct: 60 --STDVRFQSTTTYFELEGCFAELSTGQ---------QGRFISAATDASLTQARFGLRFD 108 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTVPNVPN 178 S + + K+G+ +VR + + LRDA R + + + N Sbjct: 109 GARSGIKPVLWAGKEGNS-----AEPGCHEMVRHVYLPPLRDAKRSLASGNPTRIMALLN 163 Query: 179 VEVTARQLDFLARELSSHPQN----LSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 + LA+EL + DG + +GLSA+ + + G + Sbjct: 164 HFLEGTTPAQLAKELGRTHSHDVLVKVDGAVEKGLSALTSGVRRQTASLGFSTD--EALV 221 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 A + + + + G ++ + + A L+ + L L L+E+ Sbjct: 222 DIARDLRFKLADHGVDPEDLRYSGHGYANLLFMAIIAVELEKVRSADL-----TLFLVEE 276 Query: 295 PETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVEHVCR 338 PE LHP + + L LQ I T+S L + + + Sbjct: 277 PEAHLHPQLQAAVLAFLRDQAEQSRKDAPTDHAPSGELQVIVATHSPNLSAWVNSDRLVV 336 Query: 339 LVRESSRVAAWRLG--------------PSGLSTE------------------------- 359 + G SGL T+ Sbjct: 337 FKSVVASAEQAPAGEPTIEPTVADAAVIGSGLGTDHTEADVTGTDALTATMTAAALRRST 396 Query: 360 -------------DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR--QCGHHF 404 + R++ ++ + + LF LLVEG E ++ +A+ H Sbjct: 397 RCIPLSLMQLDALERRKVDRYLDVTKAALLFGGRVLLVEGIAEALLLPAIAKHHTLKEHP 456 Query: 405 DAE----GIKVIEFAQSGLKPLVKFA 426 D + P Sbjct: 457 DQLRLFRSTVFVPIDGVDFSPYATLL 482 >UniRef50_B5EKT6 ATP-dependent endonuclease, OLD family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5EKT6_ACIF5 Length = 773 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 83/550 (15%), Positives = 159/550 (28%), Gaps = 115/550 (20%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + + FR + + + + +G N GK+S A+ L LS D F D Sbjct: 1 MYVHSLAFKNFRRLKDARVDFADDLTIFVGANNSGKTSATHAIELFLSGGKD--KFTVHD 58 Query: 60 FWFPP---GDINGREHHLHIILTFRESLPGRHRVRRYRPL--------EACWTPCTDGYH 108 F+ + E + + F L A W G Sbjct: 59 FYAGCWADFENFPAEGAIDAKVEFPAISLDAWISVDADNLYRVVELLPRAAWEGSLVGLR 118 Query: 109 RIF-----------YRLEGE---------------------------SAEDGSVMTLRSF 130 F +R + S E + +LR F Sbjct: 119 IEFAAKDAAQTLANFRAKATKVAKFAKTKEKDGQDYKPWPRNMRDYLSRELKNEYSLRYF 178 Query: 131 -LDKDGHPIDVEDINDQARHLV------------RLMPVLRLRDARFMRRIRNGTVPNVP 177 LD+ + D + ++ L+ V L R + Sbjct: 179 ILDEAQLKEETADAAYTPKEIIGDAERSGHTVINSLIKVDFLSAQRHLSDGNAQART--- 235 Query: 178 NVEVTARQLDFLARELSSHPQN---------LSDGQIRQGLSAMVQLLEHYFSEQGAGQA 228 E +++L + ++ LS+ Q+ + + + G Sbjct: 236 --EDLSKRLSRVYTRNQKQREDDHNALRALALSEDQLTNHFAEVFSDTFKSLRKLGYPGL 293 Query: 229 RYRLMRRRASN--EQRSWRYLDIINRMIDRPGGRSYRVIL------LGLFATLLQA---- 276 + RA+ E+ ++ +++ + L LG + Sbjct: 294 ANPTLEIRAALKLERLMGDQQAKVHYLLEEATAEVEALALPDSYNGLGFKNLIYMGVELL 353 Query: 277 ------KGTLRLDKDARP---LLLIEDPETRLHPIMLSVAWHLLNLL---------PLQR 318 T ++D R L+ IE+PE +H + L L Q Sbjct: 354 DIHSAWSSTEEGEEDKRQPIHLIFIEEPEAHMHAQLQQAFVRKLTDLISPTGDDGYATQF 413 Query: 319 IATTNSGELL---SLTPVEHVCRLVRESSRVAAWRLGPSGL---STEDSRRISFHIRFNR 372 + TT+S +L P+ + R ++ ++ S + D + +++ Sbjct: 414 VITTHSPHILYERGFQPIRYFRRSPETGAKQSSAVFNLSVFYDQNEPDRDFLQRYMKLTH 473 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 FA +LVEG E V+ + Q A + ++E + K +G+ Sbjct: 474 CDLFFADAAILVEGNVERLVLPLMITQGAKKLSAAYLSILEVGGAFAYRFRKLIEFLGLT 533 Query: 433 WHVLVDGDEA 442 ++ D D Sbjct: 534 TLIVTDLDSV 543 >UniRef50_B4B934 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B934_9CHRO Length = 576 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 80/540 (14%), Positives = 171/540 (31%), Gaps = 76/540 (14%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++I +R ++ + L+ N +IGEN GKS+LL L +L + + F+ DD Sbjct: 1 MKIINLKIQNYRNLDGVELIFHPDINFIIGENNLGKSNLLKLLNILFNQQR----FKEDD 56 Query: 60 FWFPPGDINGREHHLHIILTFRE----SLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 F+ E + L E + + A D Sbjct: 57 FY---NSDRAIEVEFSLELETLEIGMFNDLFDPENSHILNIVAVQESVDDNLEFKHKESG 113 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN 175 D +P + L ++ + + N + Sbjct: 114 SFIPRADLKCINYIDYDSLRNPSSELKFDKIKGAGKFLNYIV-------FKYLENSQTQD 166 Query: 176 VPNVEVTARQLDFLARELSSHPQNLS---DGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 + + +++ L E++ + Q + D I L + L Q R Sbjct: 167 LD--FIDKSKINELLLEVTGNLQKIKPFKDFFIEAILENNQENLLTKLIILADDQ--KRR 222 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL- 291 + + Q + + + + P+L+ Sbjct: 223 LENLSYGVQFYSLIPLALLEKLLSLNNKK---------NFKKCIFEDESTAEKCLPILIG 273 Query: 292 IEDPETRLHPIMLSVAWHLLNL---------------------LPLQRIATTNSGELLSL 330 +++PE LHP L L Q I ++S +L L Sbjct: 274 LDEPEIHLHPYAQRALVKYLKKIVINEDKDFSELLRTLFSIDRLLGQIIIVSHSPSIL-L 332 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSG--LSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 + + R + + L + +++ ++ + + + F++ +LVEG++ Sbjct: 333 DDYKKIIRFYVDINDKKLTVKSGKEIVLEKKTEKQLLRNLPYIK-EAFFSKVVILVEGDS 391 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYA 447 E ++ + D GI +I+ + PL+ ++ GI ++D D+ + Sbjct: 392 ELGAFPVFVQKMNINLDELGISIIKAGSPHSIVPLMNLLKKFGILSVGIMDSDQKKIYES 451 Query: 448 ATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKA 507 + +L + E D E ++ D+ + + P L+ ++ KA Sbjct: 452 KKIENLFFTELE------------DFEDEIFNS--LDLLDYILYVESETPKKLKFMVQKA 497 >UniRef50_A3ELC8 Putative uncharacterized protein n=1 Tax=Vibrio cholerae V51 RepID=A3ELC8_VIBCH Length = 584 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 95/586 (16%), Positives = 191/586 (32%), Gaps = 70/586 (11%) Query: 1 MILERVEIVGFRGIN--RLSLMLEQNNV--LIGENAWGKSSLLDALTLLLSPESDLYHFE 56 M L +I FR IN ++ + NN+ L G+N GKSS+L A +P + E Sbjct: 1 MKLVSFKISNFRAINGDNNNIYFKDNNIVFLFGKNNIGKSSVLHAYRYFATPNQKV---E 57 Query: 57 RDDFWFPPGDINGREHHLHIILTF-RESLPGRHRVRR----------YRPLEACWTPCTD 105 DF+ + + I TF +E + + + W+ Sbjct: 58 LTDFYDQTTK-----NEIVIEATFLKEESDNENFADKGLNKWVDDEGLVKFKKTWSEVDK 112 Query: 106 GYHRIFYRLE-GESAEDGSVMTLRSFLDKDGHPIDVEDIND---------------QARH 149 + + +E G+ ++G + + + I +E + + + Sbjct: 113 AAKKQTFSIEVGDYVDNGFGGLEQILTNATPNIIYIEAMPNVKTLTDWLEKEIKNKLLKQ 172 Query: 150 LVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQG- 208 L + ++ +++ + +++ + + + N+ ++ Sbjct: 173 LKEDHYEEYSKALNAVKSLQDKVESSGYLGDISEAANKYFCKTFPNLQLNIQSTPHKEAD 232 Query: 209 -LSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL 267 A + + + + E +R D G R ++ Sbjct: 233 LSKAFEKDFSVTIGDARKAEEAKLAEVVEIAEELVDEIDTTSSDRKFDLHGHGLIRQAII 292 Query: 268 GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLS----VAWHLLNLLPLQRIATTN 323 + A K + ++L E+PE LHP + + Q I ++ Sbjct: 293 NILALFKDTKDGEKH------IILFEEPELYLHPSNKRKFRDTLYQIAEQDDYQIICVSH 346 Query: 324 SGELLSLTPVE-HVCRLVRE-SSRVAAWRLGPSGLSTEDSRRISFHIRFNR-----PSSL 376 +L+ ++ + R V++ + ++ G S ++ + + NR + Sbjct: 347 DPQLIDMSRKHTSLARFVKKPNGETEIYQAGDDIFSRDEETK-DRILMLNRFNPHICETF 405 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHV 435 F+ +LVEG+TE ++ + H+ D E I V+ P ++ I HV Sbjct: 406 FSDEVVLVEGDTEAIILRGM--LSDHYPDKE-IFVLNTGTKNNIPFFIEVLSHFKITQHV 462 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPEN 495 + D DE V L D + L + + V R I Sbjct: 463 IHDSDERYLYVDGKVS--LKKDESPKVNSAWTLNQNIWDELVKACEQGVVVKRYVSIRNF 520 Query: 496 VPMNLRKIISKAIHRSSKPDLAIEVAMEAG-RRGVDSVPTLLKKMF 540 + K SK KP A E A S+ + LK++ Sbjct: 521 EHSHDYKHDSKK----GKPLSAYEFAKTLDINDNSKSIVSFLKQIV 562 >UniRef50_C7NQX8 SMC domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NQX8_HALUD Length = 584 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 94/603 (15%), Positives = 195/603 (32%), Gaps = 75/603 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++I FR I S+ L N+LIG+N GKS+++ A+ + + + DF Sbjct: 1 MQVTEIDIENFRSIPETSIGLGDFNLLIGKNNAGKSNIVKAIYRYRDLVAG--NVDISDF 58 Query: 61 WFPPGDINGREHHLHIILTF------RESLPGRHRVRRYRPLEACWTPCTDGY-----HR 109 + + + +++ RE+L T H Sbjct: 59 YESAVTRGKQPEPIKFSISYQIEEGTRENLIESLSENHEVSASVYDTLMDSESFQKYNHE 118 Query: 110 IFYRLEGESAE------DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR 163 I R G S +GS + L LD +++ D+++ L + + Sbjct: 119 ISIRETGVSHNTINTCLNGSKVEL-GTLDVSDESVELLDLDELMDKNRSRHQ-LSDKPSN 176 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE- 222 + + ++ E + ++ R +D + + L+ + Sbjct: 177 QINDVIPSSIQGGILGEFSEWKIIAPFRRTEERGVFGADPDLDPTGENLTTFLQSIREDG 236 Query: 223 ---------------QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL 267 +G + R N + R + + I S +L Sbjct: 237 TGRYSKICKQYEDIMEGVDEVRIETREDGDGNAVPTIRIDEQQSDDIGLDELSSGAKEIL 296 Query: 268 GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 L ++ ++ L IE+PE LHP + ++ + Q I TT+ Sbjct: 297 ILVTQIIVSRSDNSP-------LYIEEPELHLHPAAEREIYSMITRVAQDYNTQVIVTTH 349 Query: 324 SGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLL 383 S + VE + V+ + L I I + L A + Sbjct: 350 SDVFVDEVNVEDIFS-VKRGDYTYIDTVNQGELGE-----ILTDIGYPTSEFLQADRIVF 403 Query: 384 VEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL----KPLVK----FARRMGIEWHV 435 VEG ++ V++ A++ F G++ ++F + P +MGI + Sbjct: 404 VEGRSDRVVLSNWAKKLDLSFSINGVEPVKFGGDEIFEDGNPYTNEIPDLLGQMGIPYKY 463 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY---RQGFSDVFHRMAQI 492 + D D S + ++ + + +E ++ R + +I Sbjct: 464 VFDSDGEDPDKKE---SEIASELGLSAAKICVIDGYCIESYLAKPPRALAETLVVEQEEI 520 Query: 493 PENVPMNLRKI-ISKAIHRSSKPDLAIEVAME------AGRRGVDSVPTLLKKMFSRVLW 545 E++P + + + K L + E A + + + +K M ++ Sbjct: 521 EEDLPDDPYGVNMKSKFDSLFKKHLGTGYSEEKHGAAVAKKMQPNEISEEMKAMIEDIVT 580 Query: 546 LAR 548 + R Sbjct: 581 MER 583 >UniRef50_A4J2V4 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2V4_DESRM Length = 591 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 87/553 (15%), Positives = 180/553 (32%), Gaps = 84/553 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L +VEI FR + + L + +IG N +GKSS+L A+ LLS + D+ + DDF Sbjct: 1 MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDV--IKPDDF 58 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRP------------------------- 95 P R + I F + P R ++ Sbjct: 59 RLLP--DGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIET 116 Query: 96 -LEACWTPCTDGYHRIFYRLEG--------------ESAEDGSVMTLRSFL-------DK 133 L + + L G + E+ + F D Sbjct: 117 FLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDM 176 Query: 134 DGHPIDVEDIN----DQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFL 189 + P ++ + L RL+ + ++ + + + + + Sbjct: 177 EAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILAD 236 Query: 190 ARELSSHPQNLSDGQIRQG-------LSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQR 242 + +NL++ Q + + + + + + + + E Sbjct: 237 NQLAKDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEIL 296 Query: 243 SWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP---LLLIEDPETRL 299 +Y + ++ R ++ ++L+ L+ K+ R ++ E+PE L Sbjct: 297 KPKYSVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYL 356 Query: 300 HPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPV-EHVCRLV-RESSRVAAWRLGPSG 355 HP ++ + L Q I+TT+S ++ L+ + + ++ ++ ++ G S Sbjct: 357 HPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVSE 416 Query: 356 LSTEDSRRISFHI------RFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE-- 407 H+ FA L+VEG++E I E Sbjct: 417 ALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIK 476 Query: 408 -GIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 ++ + + LVK+ + + I V+ D D + A + + A + Sbjct: 477 STFQITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHI----EAAVGDTS 532 Query: 466 TALPALD-MEHFM 477 P D +E + Sbjct: 533 RVFPLQDCLEDCL 545 >UniRef50_A5VKD5 AAA ATPase n=4 Tax=Lactobacillus reuteri RepID=A5VKD5_LACRD Length = 537 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 91/541 (16%), Positives = 177/541 (32%), Gaps = 74/541 (13%) Query: 1 MILERVEIVGFRGINRLS-LMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYH---- 54 M L + + F+ L + +N N+L+G N GK++++ AL L+L S Y+ Sbjct: 1 MYLNELYLYNFKSFKGLQKITFNRNKNILVGNNGVGKTTVIQALRLILKGSSFEYNGVSY 60 Query: 55 ------FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT---D 105 E + + LTF E+ + R E + Sbjct: 61 LAKLINAEIQKNYDIGTQSVDELPSFQLALTF-ETESDDELIPSLRKFEGETIIGGKKLE 119 Query: 106 GYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLV-------RLMPV-- 156 G I + E S + + + D + D+ +L R+ P+ Sbjct: 120 GKMGISFSYEFNSDYEDEFTLYQKTKNNDEKLLIPYDLYHVKHNLFGGGTYTARMDPMKS 179 Query: 157 LRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL 216 + + + RF N + QL + S + Q + Sbjct: 180 VFIDNDRFNGDPYNMFARQMYYTLDKKEQLLAKFTFRDKN---------NDLFSEINQKI 230 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 Y E R+ + +++Q + I+ G +I Sbjct: 231 NGYNLEVNTDGLRFESLLGIKNDKQVA----------IEEEGSGKENLI----------- 269 Query: 277 KGTLRLDKDARP-LLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPV 333 K + LDK L++IE+PE L + +Q I TT+ ++S V Sbjct: 270 KTKIALDKSIETKLVVIEEPENHLTASSTREQLANIEKNSDDVQIIMTTHDSHIVSRLSV 329 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 ++ L +R + ++ L + + L A+ +LVEG E ++ Sbjct: 330 RNLLWLKDFENRKSIYKF--QDLDESTLEYFNKRDDLDFLRILTAKKVILVEGAAEYILM 387 Query: 394 NELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 ++ D I+V+ +P VK + +G + V D D ++ Sbjct: 388 PMFLKKLNVKND---IEVLSMNGRYYQPFVKLGKEVGNKILVFTDNDGEIER-------- 436 Query: 454 LNNDREAEREHLTALPALD-MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 L +E E++ L+ + + + + + P + N+ ++ H Sbjct: 437 LQEIKEFNGENVRVYTDLNLLNYTFEVSEYEKNKTLICEEPFSTKANVENKVNG--HTYD 494 Query: 513 K 513 K Sbjct: 495 K 495 >UniRef50_C5T1P1 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1P1_ACIDE Length = 703 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 99/612 (16%), Positives = 185/612 (30%), Gaps = 103/612 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ + I F+GI +L E L+GEN GKSS++ A+ L+ ++ D Sbjct: 1 MKLKHIAISNFKGIQADNLSPESFTCLVGENNAGKSSVMQAIVFALNRPKNIPSAHFYDS 60 Query: 61 WFPPG---DINGREHHLHIILTFRE--------SLPGRHRVRRYRPLEACWTP-CTDGYH 108 P +++G L+ Y P E+ Sbjct: 61 SQPVSFDFELSGVTEAHLARLSDEAKGKIAGLIVDEELALRVAYAPGESVSIQVKAQQPK 120 Query: 109 RIFYR-------LEGESAEDGSVMTLRS----FLDKDGHPIDVEDIND--QARHLVRLMP 155 YR L G+ + L S F P+ + + +L P Sbjct: 121 EERYRSDAIDAALSGKKGQAAIEEALWSAYPEFKAAYSEPLKLLGTAKAFVKEQVAKLPP 180 Query: 156 VLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQI---------- 205 + + ++ + + + L +L Q+ S G++ Sbjct: 181 EQFTSGYTALPSGISASISPLLPEPIYIPAVKNLNDDL-KTSQSTSFGRLLGLLLEDMAE 239 Query: 206 -----RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYL------------- 247 L + L E R+ +R S + Sbjct: 240 DLVHVNTALEKVNSLFNRVTIEGKVVDGRHAKVRDLESEVEGLLSANFPNVRVQLEIPPP 299 Query: 248 --------------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP----- 288 D + +ID G R + L + + ++ DA Sbjct: 300 ELKTILNAAQIFIDDGSHDLIDNKGDGIKRSLTFALLQAYVNRQDKQKVQVDAGGKAPRP 359 Query: 289 -LLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 + L E+PE LHP V ++ L + Q + TT+S + R+ ++++ Sbjct: 360 LIFLFEEPELYLHPRSQRVLFNTLARISENYQVLVTTHSPLFFAPGVTASFVRVAKQAAA 419 Query: 346 VA-AWRLGPSGLSTEDSRRISFHI-RFNRPS-SLFARCWLLVEGETETWVINELARQC-- 400 +L P + + +F + RF + F++ +L EGE++ +A+ Sbjct: 420 PKPIAKLFPVNFALNKADAETFRLARFEHADAAFFSQSVVLFEGESDDAYCKHVAQLFKD 479 Query: 401 GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 F+ + ++ + G F GI ++ D D + L D++ Sbjct: 480 EWDFERRNVALVRVSGKGNFLKFRNFFESFGISVRLVADLDAIFDGF-----KHLGTDKK 534 Query: 460 AEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKP--DLA 517 + L LD R+A + R+I +A S K + A Sbjct: 535 SSDLRDKLLQTLD--------------GRIAALGTKAEPKPRQIQRRANQDSWKDRYEAA 580 Query: 518 IEVAMEAGRRGV 529 Sbjct: 581 KAALQAVQAGAP 592 >UniRef50_C7RGV9 Overcoming lysogenization defect protein n=6 Tax=Bacteria RepID=C7RGV9_ANAPD Length = 696 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 76/585 (12%), Positives = 181/585 (30%), Gaps = 96/585 (16%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFE--- 56 MIL+++++ FR + L ++ +++IG+N GK+S + L +L+ + Sbjct: 1 MILKKMKVKNFRLLKNFELNFKDELSLVIGKNNCGKTSSIIVLDKMLNSSKLFWEDINLE 60 Query: 57 -RDDFWFPP-GDINGREHHLHIILTFRESLPGRHRVRR-YRPLEACWTPCTDGYHRIFYR 113 + D + G + + ++ T L + Y ++ + I Sbjct: 61 CQKDLYKKIIGFDITKLDEVQLLETINMQLFIEYNDNDSYENIQKFMMDLNPDNNIIVLE 120 Query: 114 LEG-------------------ESAEDGSVMTLRSF------------LDKDGHPIDVED 142 E + S ++F D + + + Sbjct: 121 FISVIAAKKIIELKNIISEKNIEDFKSFSKFMSKNFANFFETKKYSRGFDVEANKTTQDR 180 Query: 143 INDQ----ARHLVRLMPVLRLR----DAR------FMRRIRNGTVPNVPNVEVTARQLDF 188 + + ++++ + R D R + + E +L+ Sbjct: 181 SEEIDNKDIQKVIKVAGIRADRAVSNDDRNHVLSGLTGKYFSSYKAAKDESESVFTRLEE 240 Query: 189 LARELSSHPQNLSDGQIRQG-------LSAMVQLLEHYFSEQG--AGQARYRLMRRRASN 239 E + +G+ +G S ++ +++ Y + + + + Sbjct: 241 KLEEADKELYKIYNGEKSEGEEPIDGIFSDVIDVIKTYGGAENGIDIAIESSISEKNLLS 300 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + Y + + + L+G+ + L LL IE+PE Sbjct: 301 DNTNLSYRQGGDYSLPETYNGLGYLNLIGILFEIETNIQELFEQPADINLLYIEEPEAHT 360 Query: 300 HPIMLSVAWHLLNL--------------LPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 HP + + + LQ + T++S ++S + + L + + Sbjct: 361 HPQLQYIFIRNIKSHIKAHRNKLLKEKNKQLQILITSHSSHIVSECNFDDIIYLKKNGNT 420 Query: 346 VAAWRLGP--SGLSTEDSR---RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 V A ++ + + ++ NR FA + +EG+TE ++ + + Sbjct: 421 VIAKSFNSLKEEYGGDEQKGFKFVKQYLTMNRSELFFADKAICIEGDTERILMPVMMHKI 480 Query: 401 G---------HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD--EAGKKYAAT 449 ++ I +IE + + +G + + D D +A KK Sbjct: 481 DNKEKPRADIIPLLSQNISIIEV-GAHSHIFMPLFSFLGTKVLFVTDIDSVKAEKKIDKN 539 Query: 450 VRSLLNNDREAEREHLTALPALDMEHFMYRQGFS---DVFHRMAQ 491 + E T ++ F G + F + Sbjct: 540 GKERTVYTSCHPDEG-THTSNASIKEFFKDTGIDTSNNQFKELVG 583 >UniRef50_C1DUM9 ATP/GTP-binding protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUM9_SULAA Length = 484 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 83/513 (16%), Positives = 176/513 (34%), Gaps = 65/513 (12%) Query: 1 MILERVEIVGFRGINR-LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++ I FR + +E V +G N GKSS+L+AL + + F DD Sbjct: 1 MKLRKINIENFRCYKDETEVEIEDLTVFVGANDSGKSSILEALDIFFNEGRAEIRFTEDD 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + + E +P + R Sbjct: 61 INIHARMEGKHDVKITCVF---EDIPEQFLRRLEENNIP--------------------I 97 Query: 120 EDGSVMTLRSFLDKDGHPIDVED-INDQARHLVRLMPVLRLRDARFMRRIRNG------- 171 D S+ ++F + ++ E+ + +P+ L N Sbjct: 98 NDSSITISKTFGKNNKTFLNGEELSKKLIGEIKDYLPIYGLFKVDRTNTDDNPEIKDPLM 157 Query: 172 -TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 V + +L +A ++ +++++G + + + +L + +E Sbjct: 158 FAVEKSLKEQEIKYKLQEVAEKIKKAIEDVANGTLDK----LKKLNGNIATELNVYIPDI 213 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL--DKDARP 288 ++ R ++ I ++++ G R+ILL F + K R + + Sbjct: 214 EELKWRDVFKRIGIYSDKGI--LLNKRGSGVRRLILLSFFLFEAERKRYERHTDEIEIST 271 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESS 344 + IE+PET LHP + L L +Q + TT+S + L PV + + + Sbjct: 272 IYAIEEPETSLHPDQQKQFINSLIELSSNEKVQVLLTTHSPYIAKLIPVNSLRFIDQGYQ 331 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-------NELA 397 ++ I+ + + ++ + + VEG T+ + EL Sbjct: 332 YT-LPKVSSYKEDNNILLNIAKRLGIHPINT---KVVIFVEGNTDKKFLININENIKELK 387 Query: 398 RQCGHHFDAEG--IKVIEFAQSGLKPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSL 453 + + E I +I S L + + + G+ L D D +K + Sbjct: 388 DLIHLNSEIENNTITIIPLNGSNLIDWINAHYLKGSGLLEFHLYDND---RKDYQEIIEK 444 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVF 486 +N+ + T++ +E++++ + F Sbjct: 445 VNDRNDGSIGLTTSMRE--IENYIHWDLIEEEF 475 >UniRef50_A6X3P4 ATP-dependent endonuclease, OLD family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X3P4_OCHA4 Length = 681 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 97/671 (14%), Positives = 189/671 (28%), Gaps = 146/671 (21%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE----------- 49 M LER I FR + + ++ + LIG N GKSS+L A+ S Sbjct: 1 MQLERARIRNFRSLRDVEVVFGAHTALIGGNGAGKSSILKAIEKFYSTTKNCDADDFFGR 60 Query: 50 --SDLYHFERDDFWFPPGDINGREHHLH----IILTFRESLPGRHR-------VRRYRPL 96 E + E + ++ + P R + + + Sbjct: 61 DQGQPIEIELTFHQLSEQEAAAFEDRVRDGRLVVTRIFDGGPSSGRYHGVVPQIPDFVAV 120 Query: 97 EACWTPCTDGYHRIFYRL------------------EGESAEDGSVMTLRSFLDKDGHPI 138 A R + + L DG Sbjct: 121 RAHSAATPKRAAYNALRENNPLYADLPTAGSAAAVDQAMLTWEAEHPDQLVLLPDDGQFF 180 Query: 139 DVEDIND-QARHLVRLMPVLRLRDAR-FMRRIRNGTVPNVPNVEVTAR-----QLDFLAR 191 ++ + + + + + +RDA + + + + V ++ + Sbjct: 181 GFQNNSRGKLQQHTSFVFIPAVRDASADAADGKTSVIGKLLELLVRSQILQRPDVQAFKA 240 Query: 192 ELSSHPQNLSDGQIRQGLSAMVQLLEHYF---SEQGAGQARYRLMRRRASNEQRSWRYL- 247 +L+ Q L + L A+ L + +R + + +L Sbjct: 241 QLTEAYQALVSAENMPELGALAGTLTADLRGLYQDAEVSLAWREVGEMPVPLPMADVFLK 300 Query: 248 -DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP------------------ 288 + +DR G R + L L A+ + +A P Sbjct: 301 DEGFGGPVDRQGHGLQRAFIFTLLQHL--ARTAVPEGDEAPPDSDVDGSDDAPAAAAAAV 358 Query: 289 -------LLLIEDPETRLHPIMLSVAWHLLNLLP----------LQRIATTNSGELLSLT 331 +L IE+PE HP +L L Q I ++S +S+ Sbjct: 359 MAQAPTLILAIEEPELYQHPTKQRHFAEVLRGLSSGTLPGAQGHTQVIFGSHSPMFISMG 418 Query: 332 PVEHVCRLVRES-SRVAAWRLGPSGLS-TEDSRRISF-------------------HIRF 370 + + R + L ++++ + Sbjct: 419 KADEIRLTRRSHCDDSEFKQCSLQALDLGTVAQKLERGWNKPAGTFSAQTLMPRLHILGA 478 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL--KPLVKFARR 428 FA +LVEG ++ + AR G +F+A GI ++ +P V R Sbjct: 479 ELAEGFFATGVILVEGRSDKAALTATARMLGVNFEAAGIAILSTEGKANLDRPYV-IFRE 537 Query: 429 MGIEWHVLVDGDEAGKKYAAT-VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFH 487 +GI +L D D+ + T L + + + A P D+ Sbjct: 538 LGIPTFMLWDCDQQLPEAKRTPATDLALSKLAKPNDQIDAAPTSDL-------------- 583 Query: 488 RMAQIPENVPMNLRKIISKAIHRSSKPDLAIE-VAMEAGRRGV------DSVPTLLKKMF 540 + + K + + P++ +A GV +P ++ + Sbjct: 584 -----ISDCYAHFEKTLEHKLKEDLTPEVHTACLAAACEPFGVHPSNDAQKIPEIVYQTL 638 Query: 541 SRVLWLARGRA 551 R A+ + Sbjct: 639 LR----AKEQG 645 >UniRef50_B2VB80 Predicted ATP-dependent endonuclease of the OLD family n=4 Tax=Gammaproteobacteria RepID=B2VB80_ERWT9 Length = 608 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 95/589 (16%), Positives = 187/589 (31%), Gaps = 98/589 (16%) Query: 1 MILERVEIVGFRGINR-LSLMLEQNNV-LIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L+++++ FRG + + +++ ++G N +GKS++L+AL + + + D Sbjct: 1 MRLKKIKLTNFRGYRNTIEIPVDEAMTGIVGRNDFGKSTILEALAIFFEIDG----IKAD 56 Query: 59 DFWFPPGDINGREHHLHIILTF------------------RESLPGRHRVRRYRPLEACW 100 + + H I F E L H Sbjct: 57 KNDMNCFSMANGDTHFEISCEFDDLPPVILIDERVSTTLASEHLLNSHECFEIVKTFKAT 116 Query: 101 TPCTDGYHRIFYR------------------------LEGESAEDGSVMTLRSFLDKDGH 136 T I + +E + + + R + Sbjct: 117 TTGKPDKTYIRCQHPVNEPLNNLLGMKISELKAIGKDVEQKVEDKRTASLWRQAIRDAAM 176 Query: 137 PIDVEDI------------NDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTAR 184 P + +I ++ +P L A + N P + Sbjct: 177 PYECAEILLDVDKGLGTETKSIWGRILEQLPTFALFKADRESSDGDSEAKN-PLQQAVKD 235 Query: 185 QLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW 244 L ++S+ Q + D + + +L E + + A + R + + Sbjct: 236 AQAALQGKISALEQEIQDSVLDVAGRTLDKLRE--MAPELANELTPRFKEKPKWTFNFTL 293 Query: 245 RYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP---LLLIEDPETRLHP 301 + I I++ G R+ILL F + P + IE+PET HP Sbjct: 294 DGENGI--PINKRGSGVRRLILLNFF------RAEAEKAVSGTPRNVIYAIEEPETSQHP 345 Query: 302 IMLSVAWHLL----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 + L N Q I TT+ L L PVE + + ++ ++ + + Sbjct: 346 NYQIMLMKALLLLSNKPNRQIIVTTHVPALAGLIPVEGIRYVTKDEDGQPVVKMPDNAVL 405 Query: 358 TEDSRRISF--HIRFNRPSSLFARCWLLVEGETETWVI---NELARQCG---HHFDAEGI 409 E + + R A+ +LVEG+++ + ++ G + + I Sbjct: 406 REATESLGVLPETGMER-----AKGIVLVEGKSDVTFLRHAGICLKKSGDIPVNLEDVNI 460 Query: 410 KVIEFAQSGLKPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 I G A +G+ W V +D D G + E + Sbjct: 461 VPILIGGCGSVKHWVTLNLANDLGLPWCVFLDSDIGGDPAQVLSIEKRKKEVEEAGKMFF 520 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPD 515 + ++E+++ D Q+ + +KII KA ++KP+ Sbjct: 521 STRKREVENYLCPDLIRD--ETGVQVVFTDTCDAKKIIGKA--TNTKPN 565 >UniRef50_Q19NH8 ATP/GTP-binding protein n=6 Tax=Enterobacteriaceae RepID=Q19NH8_ECOK1 Length = 608 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 99/584 (16%), Positives = 189/584 (32%), Gaps = 88/584 (15%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNV-LIGENAWGKSSLLDALTLLLSPE--------- 49 M L ++++ FRG N ++++++ ++G N +GKS+LL+AL + E Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKNDM 60 Query: 50 ------------------SDLYHFERDDFWFPPGDING----REHHLHIILTFRESLPGR 87 DL F D + + + I+ TF+ + G+ Sbjct: 61 NCFSLREGDGRFEIACEFDDLPDFIMIDDRVQTTLASEHLLNEDGNFEIVKTFKATTSGK 120 Query: 88 HRVRRYR-------PLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDV 140 R PL + +E A+ + R + + P Sbjct: 121 PEQTCIRCIHPDEEPLRNLLGMKISELKAVGKEVEKNVADKRTASLWRQAIREAAAPYTC 180 Query: 141 E------------DINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDF 188 D ++ L+P + A + N P + Sbjct: 181 SEIMLDVDKEFGTDTKSLWGKILDLLPTYAIFKADRESSDGDSEAKN-PLQQAVKDAQAA 239 Query: 189 LARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLD 248 L ++++ + D + + +L E + + A + R + + + Sbjct: 240 LQDKITALENEIQDSVLDVAQRTLDKLRE--MAPELASELTPRFKEKPKWTFNFTLDGEN 297 Query: 249 IINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAW 308 I I++ G R+ILL F + + IE+PET HP + Sbjct: 298 GI--PINKRGSGIRRLILLNFFRAEAE---KNVAGTPRNVIYAIEEPETSQHPNYQMMLM 352 Query: 309 HLLNLLPL----QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRI 364 L L Q I TT+ L L PVE V + R + ++ + E + + Sbjct: 353 KALLALAGQPHRQIIVTTHVPALAGLIPVEGVRYVTRNEAGEPVVKMPDDAVLKEATESL 412 Query: 365 SF--HIRFNRPSSLFARCWLLVEGETETWVINELAR------QCGHHFDAEGIKVIEFAQ 416 R A+ +LVEG+++ + A + I + Sbjct: 413 GVLPETGMER-----AQGIVLVEGKSDVTFLRHAASSLKQSGALPASLEDVKIVPVLIGG 467 Query: 417 SGLKPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 G A+ +G+ W V +D D G + E + A ++ Sbjct: 468 CGSVKHWVTLNLAKDLGLPWCVFLDSDIGGDPAQVLSIQKRKKEVEEAGKVFFATRKREI 527 Query: 474 EHFMYRQGFSDVFHRMAQIPE--NVPMNLRKIISKAIHRSSKPD 515 E+++ D+ + + + +KII +A+ KPD Sbjct: 528 ENYLC----PDLIEEITGVAVTFTDTCDAKKIIGRAV--GMKPD 565 >UniRef50_A1SC11 SMC domain protein n=2 Tax=Actinomycetales RepID=A1SC11_NOCSJ Length = 533 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 86/471 (18%), Positives = 154/471 (32%), Gaps = 57/471 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERD 58 +L+++ I +R L N+++G+N GKS+LL+A+ + L+ E Sbjct: 1 MLKKIAIRNYRTFKSFELEFAPDLNIVVGDNDAGKSTLLEAIGIALTLRLGGRSLQSELS 60 Query: 59 DFWFPPGD-----------INGREHHLHII-LTFRESLPG-----RHRVRRYRPLEACWT 101 F F + I S P + P Sbjct: 61 PFLFNLETTEEYIAALTAGATPDPPEILIELFLDSASAPAILRGSNNLDGTDDPGVRVRI 120 Query: 102 PCTDGYHRIFYRLEGESAEDGSVMTLRS---FLDKDGHPIDVEDINDQARHLVRLMPVLR 158 YH + + ++ V T +L G+ I I A Sbjct: 121 ALNPDYHGEYTEFVKDPSQVRLVPTEYYNVQWLGFSGNAITFRSIPAVAS---------- 170 Query: 159 LRDARFMR--RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL 216 L DA +R + + + N +T + L R S + S + A+ + L Sbjct: 171 LIDATTIRLASGADYHLQGIINNHLTDGERVELTRAYRSLREEFSS---NPSIEAINKSL 227 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 E + G R + S L + L + L Sbjct: 228 E---GQPGDVSDRTLSLSIDVSQRSSWESNLVPHLDDLPFGFVGKGEQSSLKVLLAL--- 281 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVE 334 R +DA ++L+E+PE L L+ ++ Q TT+S +L+ ++ Sbjct: 282 ---NRKVQDAH-IVLVEEPENHLSFTNLNQLVAKISEKCKDKQVFITTHSSYVLNKLGLD 337 Query: 335 HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI- 393 + L + L + L ++ + A+ +LVEG ++ V+ Sbjct: 338 SLFLLTPRTG------LRLTDLPASTLDYFKKLSGYDTLRLVLAKKVILVEGPSDELVVQ 391 Query: 394 NELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 + G+ +G+ VI K + A+ +GIE HV+ D D A Sbjct: 392 RAYQDKHGNLPIHDGVDVINVRGLSFKRFLDIAKPLGIEVHVVTDNDGADP 442 >UniRef50_A9HWQ9 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=A9HWQ9_BORPD Length = 605 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 100/511 (19%), Positives = 171/511 (33%), Gaps = 50/511 (9%) Query: 1 MI-LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++IVG R + +S+ LE L+G+N GKS++L AL +L P + E D Sbjct: 1 MHKIGFIDIVGLRACHHVSIPLESFTPLVGQNNAGKSTILFALAWVLKPSA----LEASD 56 Query: 60 FWF--PPGDINGREHHLHI-ILTFRESLPGRHRVRRYRPLEACWT------PCTDGYHRI 110 F P + R + IL + + + + + W P G+ Sbjct: 57 FAKEGEPIVVTARIDGITAEILEYVPEPKHQAAIAPFCNTGSMWIRVVCTAPGPKGFTCE 116 Query: 111 FYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD-ARFMRRIR 169 + ++ + E + K + L + + + D A + + + Sbjct: 117 VFDVDQYAGEG---------IPKSWRSYPTGLSQAVSALLPEPLQIDAMEDLAEDLGKAK 167 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSD------GQIRQGLSAMVQLLEHYFSEQ 223 G+ +++ + EL S Q D + L + Sbjct: 168 AGS-TLKSLLDLIMGPIIETHDELVSALQTFKDILSTDGASRSEHLKTFDDGATKALGDF 226 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIIN------RMIDRPGGRSYRVILLGLFATLLQAK 277 G A M+ E L + + R D+ G R I + L L K Sbjct: 227 FPGLAIELGMQTIEVKEFFKAGNLHVTDLETGDRRTFDKLGTGCQRAIQMALIRHLADLK 286 Query: 278 -GTLRLDKDARPLLLIEDPETRLHPI---MLSVAWHLLNLLPLQRIATTNSGELLSLTPV 333 G+ L AR LLLI++PE LHP L A L+ Q + T+S +LS Sbjct: 287 IGSKPLA--ARRLLLIDEPELYLHPQGVKRLRQALAALSQKGFQVVYATHSPLMLSRENA 344 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRF-----NRPSSLFARCWLLVEGET 388 + + + RL R N F +L EG+T Sbjct: 345 ADAVIIRKTKTDGTLARLPLRHAVASALHEAQAQSRTLFELGNLAEIYFCDLVVLCEGKT 404 Query: 389 ETWVINELARQC-GHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKY 446 E ++ L + G H + + + + P + MGI+ + D D A + Sbjct: 405 EKRLLPLLYERLRGRHPELDQVAFVAVGACSDIPKALPVLAAMGIQACGIADLDFAFTEA 464 Query: 447 AATVRSLLNNDREAEREHLTALPALDMEHFM 477 + +L E L L ++H Sbjct: 465 RKGQQPMLPKHDETLVRSKDVLKKLKLQHEF 495 >UniRef50_B7GJZ0 Predicted ATP-dependent endonuclease of the OLD family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJZ0_ANOFW Length = 569 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 73/477 (15%), Positives = 162/477 (33%), Gaps = 37/477 (7%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M L + + ++ + + + +L G N GKS++L+A+ ES Sbjct: 1 MRLIKFSVTNYKVFEKTFTIEFSKDSIVILTGRNNTGKSTILEAINCFFQKESKAKTIPS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D F + R+ + + F +++ + + TP + I + E Sbjct: 61 DCF-------SKRDKEIVLEAVF--ESDDENKITIVKKYKDGATPRFFDENDIEIKNNHE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + TL LD I + D L++ + +++ N Sbjct: 112 LKD-----TLSKILDNKPFYITPYMLPDDINELIQNIYSEIIKNDLEKLEELNEDNELEK 166 Query: 178 NVEVTARQLDFLAR-------ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + A + + + + +L S+ + + + + L + Sbjct: 167 EMRELASEYNKIKKSYPEFLKKLKSNTDKILEQVSMDVTNHLQTLFGNDHLSLKVIGGET 226 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR-LDKDARPL 289 + + R D P + L+Q + L ++ L Sbjct: 227 EGFSVNDILKSTNSRINVSSKNKPDMPLSNQGTGLQRMSLIYLIQNMIEKKMLGQNENKL 286 Query: 290 LLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVR--ESSR 345 LLI++PE LHP + L + + + +T+S L+ L+ ++ R E Sbjct: 287 LLIDEPEAFLHPEAVRALSQSLYKIGQRMPLMISTHSPILIDLSERHTSIQVFRVNEEEA 346 Query: 346 VAAWRLGPSGLSTEDSRRISF--HIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH 403 + ++ +D + + ++ F ++VEG+TE A++ + Sbjct: 347 IQLYKSTSDQFDEDDIKNMKILNYVDSYVNEFFFTDKIIIVEGDTEYIAFKHFAKRKNVN 406 Query: 404 FDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 +I ++ L+K + ++ VL D D K+ ++ ++ L N +E Sbjct: 407 LH-----IIRARGKSTIRTLMKILNQFNADYDVLHDIDNDPKRSSSDLKKQLTNCKE 458 >UniRef50_C6BF20 ATP-dependent OLD family endonuclease n=1 Tax=Ralstonia pickettii 12D RepID=C6BF20_RALP1 Length = 677 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 76/542 (14%), Positives = 158/542 (29%), Gaps = 106/542 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQN---NVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M L + I+ FR + + L+ +L+G N GK+S ++A+ L + + Sbjct: 1 MKLSEIAIMNFRLLQYARMRLDTTGITTILVGPNNSGKTSAIEAMLTFL--QRPIKQLSI 58 Query: 58 DDFWFPPGDINGR-EHHL----------------------------HIILTFRESLPGRH 88 +DF D + E H+ + L F G Sbjct: 59 NDFSLGCRDALKKFEQHVLAPPAAAAPAGGEAAVAAPPPLPDLPVLSLRLKFDYDDTGPD 118 Query: 89 RVRRYRPLEACWTPCTDGYHRIFY-------RLEGESAEDGSVMTLRSFLD---KDGHPI 138 L I + + + +L +L D + + Sbjct: 119 LAIAGELLMDLEDASASVMVEIRFAPANPEQLAQAYLKDRDDDQSLFDYLAATLHDHYKL 178 Query: 139 DVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ 198 D ++ RL L+ R +R ++ + E ++ L+ L +H + Sbjct: 179 DQFKLSPDGSEAERLPDRGILQ--RLIRIDVVSAQRHIDDREEGSKA-TRLSTLLHTHYE 235 Query: 199 NLSDGQ-------IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN 251 + + L +L + + G + + + + R + Sbjct: 236 RRYKVDAPNDFKALEKTLRDQSTILGPQYVKAFDGLMKGLAKFGHPESPKLTVRAELSAD 295 Query: 252 RM-------------------------IDRPGGRSYRVILLGLFATLLQA------KGTL 280 + +D+ R LG + + + Sbjct: 296 GLFKDTTRVYYSAASATTPPAEGPAAALDQAFELPERYNGLGFKNLIYIVLCLKSFREDV 355 Query: 281 RLDKDARP---LLLIEDPETRLHPIMLSVAWHLLN--------LLPLQRIATTNSGELLS 329 D + RP L+++E+PE +HP M +V ++ +Q + TT+S + + Sbjct: 356 ESDLEHRPRVHLVVVEEPEVHMHPQMQAVFVQKVSEFLTPAAGETGVQLLLTTHSSHMAA 415 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTE------DSRRISFHIRFNRPSSLFARCWLL 383 + R V L S + ++ R FA + Sbjct: 416 NCGFAPIRYFRRNKGTVEIKDLLSFECSATTDPEKAAMEFLRKYLTTTRCDMFFADKLVF 475 Query: 384 VEGETETWVINELARQCGHHFDAE----GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDG 439 +EG+ E ++ L + + +E + K + + V+ D Sbjct: 476 IEGQVERMLLPRLIAALDIALRDKLTSTYVCTVEVGGAYAHLFRKLIEFLQLPALVITDL 535 Query: 440 DE 441 D Sbjct: 536 DS 537 >UniRef50_D1RHV6 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHV6_LEGLO Length = 638 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 93/574 (16%), Positives = 183/574 (31%), Gaps = 80/574 (13%) Query: 3 LERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLL-----LSPESDLYHF 55 L + I + L + L++ L+G+N GKS++L A L E D Y Sbjct: 9 LVSMTIRNIGCVGNDGLEIKLDKIVCLVGKNNSGKSTILRAYELAKGSVQFDKERDRYQL 68 Query: 56 ERDDFWFPPGDINGREHHL-HIILTFRESLPG--------RHRVRRYRPLEACWTPCTDG 106 ++ ++ ++ ++ G + ++ + W P + Sbjct: 69 ATEEQSSEIILEVHIPKNIGNVDERWKTEQDGLLIVKSIWQWEAPDFQRIRKTWDPESQN 128 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRL------- 159 + +G++ V + R ++ D + + L P++ L Sbjct: 129 WAD-----DGKAGGADPVFSSRLPRPLRIGSLEDADKTQEILLNLALTPLVDLLKKEQNN 183 Query: 160 RDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQN----------LSDGQIRQGL 209 ++ + I N T + +A ++S QN ++ + + Sbjct: 184 NESELAKAIANVTAQISTLSTSHQDHFNSIAERITSGFQNVFPSLDVTLNIATAPLTPNV 243 Query: 210 SAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGL 269 S +++ + G + + W L + N + R ++ L Sbjct: 244 SDLIKKGSGLRIKDG-RANTSLNQQGTGTRRALFWAMLQVYNELTREKESREKQIKELNT 302 Query: 270 FATLLQAKGT-----------------------LRLDKDARP--LLLIEDPETRLHPIM- 303 T Q K D A P LLLI++PE LHP+ Sbjct: 303 QLTKAQKKSPHGSDEILELQKKLSSLENNDPLPNDADDPALPGYLLLIDEPENALHPMAA 362 Query: 304 ---LSVAWHLLNLLPLQRIATTNSGELLS-LTPVEHVCRLVRESSR------VAAWRLGP 353 + L Q + TT+S ++ + RL R + +R Sbjct: 363 RAAQQHLYKLAENPDWQVMITTHSPYFINPFEDHTTIVRLDRTNYERELPWQPKIYRSDT 422 Query: 354 SGLSTEDSRRIS--FHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKV 411 ++ +R+ HI + F +LVEG+TE + H E + + Sbjct: 423 ITFEEDEKQRLQALQHIDPSFAEIFFGSYPILVEGDTEHAAFIAAIIEKKHEL-MEQVTI 481 Query: 412 IEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPA 470 I L PL+K + I++ +L D D K N++ Sbjct: 482 IRSRGKAILAPLIKVMKHFKIDFGLLHDCDPPYTKSGNKNGMWTENEKIRNSILSARNDG 541 Query: 471 LDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + + H + F F + ++ P+N + I Sbjct: 542 ITIRHRVSFPDFER-FLGCDEESKDKPLNAYRNI 574 >UniRef50_D1B1K9 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=D1B1K9_SULD5 Length = 603 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 92/554 (16%), Positives = 187/554 (33%), Gaps = 93/554 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + I GFR ++ + LIGEN GKSS+L + LLLS E +DF Sbjct: 1 MKLHSLRIEGFRRFVDTTIYFDDATFLIGENNIGKSSVLKTIELLLSLEQK---ICPEDF 57 Query: 61 WFPPGDINGREHHLHIILT--FRE--SLPGRHR--VRRYRPLEACWTPCTDGYHRIFYR- 113 + + + ++LT FR+ + R R G I+ + Sbjct: 58 YSLFHEDENQRQVDSVVLTAEFRDVPTEANSWRGFRGRIFNYTVPENSIETGLSVIYKKT 117 Query: 114 ---------------LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQAR---------- 148 ++ +E S + F+ + I E I + + Sbjct: 118 FSLATLKPVIEFKQSVKTLKSEYASAQKWQDFIVASNNEITEEMITEIFQVTSFNIKAKP 177 Query: 149 HLVRLMPVLRLRD------------------ARFMRRIRNGTVPNVPNVEVTARQLDFLA 190 + L+ + D ++ R + + + T+ L Sbjct: 178 EQLDLLDEIWDIDTTAEEWFINPGGFPSNVASKLPRYLFIPAQDRMEELSTTSGVLHKTL 237 Query: 191 RELSSHPQNLSDG--QIRQGLSAMVQLLEHYFSE----------QGAGQARYRLMRRRAS 238 EL +N+S + ++ L+ + Q L+ + G + + A Sbjct: 238 NELFEDVRNVSPNYLEAQRHLNLLAQELDPSNTASDFYTLMQNLNGVLRGVFPDSEIHAK 297 Query: 239 NEQ-------RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP--- 288 + ++ + + + ++ + + +F LL+ + KD Sbjct: 298 ADLSNPDKNIKATFDIQMKSNILTPISHQGTGTVRAAVFG-LLRYRKIWEAAKDPTQRRS 356 Query: 289 -LLLIEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEHVCRL---VR 341 ++ E+PE LHP + L Q + TT+S ++ L+ ++ + Sbjct: 357 LIIGFEEPEIYLHPNAAEQMRRKIYELAGEESQIVCTTHSTYMIDLSKDKNQVLNRFSIT 416 Query: 342 ESSRVAAWRLGPSG----LSTEDSRRISFHIRFN--RPSSLFARCWLLVEGETETWVINE 395 E+ S L +D + I+F+ FA +++EG+TE V+ E Sbjct: 417 EAEGTICNPFSVSERFRDLLDDDKNHVKMLIKFDDYMSRVFFANKIIIIEGDTEEIVLKE 476 Query: 396 LARQCGHHFDA---EGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 + +++++ + LVK+ MG+++ V+ D D + Sbjct: 477 TIKLMPEEIQHKILSNVQIVKARGKAAIISLVKYLNSMGLDYFVIHDRDRGTDRAENYNI 536 Query: 452 SLLNNDREAEREHL 465 +L E + + Sbjct: 537 HILTAMNNQESKRI 550 >UniRef50_A9BIN7 ATP-dependent endonuclease of the OLD family n=3 Tax=Bacteria RepID=A9BIN7_PETMO Length = 573 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 89/542 (16%), Positives = 159/542 (29%), Gaps = 76/542 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ + I FR + L NVL+G N GKS++L AL + E F DF Sbjct: 1 MKIKSITIHNFRSLKDAMFDLYDYNVLVGANNVGKSNVLTALRIFYENEKYNEKF---DF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 D N + L E ++ + + + ++ + Sbjct: 58 PKFQTDDNESWIEIEYSLEDDEFPNLKNEYKSLNNILKVRKYLKSEDKN-----KVKNNQ 112 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 L ++ + ++ +P L D + + V Sbjct: 113 SNIYGYENGHLSENLFYGAKNISEAKLGSVI-YIPELSTTDETLKLTGPSPLRDVITFVM 171 Query: 181 VTARQLDFLARELSSHPQ------NLSDGQIRQGLSAMVQLLEHYFSEQGAGQA---RYR 231 + +L++ + + L M++ + E Sbjct: 172 KKVVKTSESFDKLNTAFEEFNSKFKEESSKDGFSLGKMMEEINDSLKEWEVEFNFNINPI 231 Query: 232 LMRRRASNEQRSWRYLDIINRMIDR--PGGRSYRVILLGLFATLLQAKGTLRLDKDAR-- 287 N + + ID G R ++ L Q +K Sbjct: 232 RHEDIIKNLVSHYVVDKNLEERIDVKCLGQGLQRHLIYTLLKLSSQYTEKKTYEKKEFLP 291 Query: 288 --PLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELLS--LTPVEHVCRL 339 L+L ++PE LHP L L Q I T+S +S + + + +L Sbjct: 292 ELNLILFDEPEAFLHPAQQEFLNTSLKSLSSEEGQQVIIATHSPIFISKNIEDIPALIKL 351 Query: 340 VRESSRVAAWRLGPSGL------------------------------------STEDSRR 363 R+ +++ STED R Sbjct: 352 KRDKGITQIFQVSKDKQRKIIEQNNELVQMLKNKLVEKSIDQAMENSIKNIMGSTEDDER 411 Query: 364 ISF-------HIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ 416 + + R S+ FA L+ EG TE I+ L + + + I V++ Sbjct: 412 MEQEAIRYLLWLDSERCSAFFADIVLICEGATEKTFIDYLIKNKWNDIRKKRIYVLDAMG 471 Query: 417 S-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEH 475 + + R +GI VL D DE K A + ++ E D+E Sbjct: 472 KFNIHRYMNLFRELGIYHSVLADKDEN--KNAHEFINQFIEKQKNEFTKSIDFFDKDIES 529 Query: 476 FM 477 F+ Sbjct: 530 FL 531 >UniRef50_Q935U7 Putative ATP/GTP-binding protein n=1 Tax=Streptococcus thermophilus RepID=Q935U7_STRTR Length = 573 Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 93/568 (16%), Positives = 208/568 (36%), Gaps = 57/568 (10%) Query: 2 ILERVEIVGFRGINRLSLMLEQN---NVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 L+ ++I ++ I + E+ N+L+G+N GKS+LL ++ LL+S + + Sbjct: 3 YLKSLKIKNYKHIGDSYVGFEKIDNFNILVGQNNIGKSTLLQSIELLISGNDSNRYITEN 62 Query: 59 D---FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 F F P + + I L FR+++ G H + + Y ++ Sbjct: 63 TKVRFSFCPEEDD-------IKLVFRDNMYGGHISGNHWDFGKKYIDKCMSYDFQPWKTI 115 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHL----VRLMPVLRLRDARFMRRIRNG 171 GE+ S ++ +F + + + +E D A ++ + +++L R + Sbjct: 116 GETQMVLSDISSITFEELNRNK-TIEAFTDLANRFKSNKLKRLKIIKLSADRNLIPEVQN 174 Query: 172 TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 V A L ++S P + +G I L A+ ++++ E + + Sbjct: 175 GKKTVSEDGAGATNLLRQYLNVASLPNEIVEGDI---LEALNEIMKP---ENNFTRIMCQ 228 Query: 232 LMRRRASNEQRSWRYLDIINRMI----DRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + ++ L N I G ++ ++L+ LF + Sbjct: 229 EIETTDTSNSMWEILLVNENGKIPISSSGSGLKTVLLVLIKLFLETREYTNNNFELSICN 288 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRL--VR 341 + + E+ E LHP + + L Q TT+S +++ + L ++ Sbjct: 289 SIFIFEELENNLHPTIQRNLFEFLYQWAIKYNTQMFLTTHSTIPINMFSGKENVTLTHIK 348 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG 401 + + S LS ++ I ++ L + + VEG ++ IN Sbjct: 349 KENGTIVT---NSALSFIENEGILMNLGVRASDILQSNAVIWVEGPSDRIYINRWIELYS 405 Query: 402 HHFDAEGI--KVIEFAQS----------GLKPLVKFARRMGIEWHVLVDGDEAG-KKYAA 448 + E + +++ + L L++ R I +++D D+ G K Sbjct: 406 NGSLKENVHYQILFYGGRLLSHLTGEVNELNELIQLFRA-NIHSIIVIDSDKTGPGKRIN 464 Query: 449 TVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPM------NLRK 502 + + + + ++E+++ + F V+ QI + + N R+ Sbjct: 465 KTKQRIKGEFNKNNAIVWITEGKEIENYLSKNIFKKVYKVDKQIGKFEKIDDFLNENSRR 524 Query: 503 IISKAIHRSSKPDLAIEVAMEAGRRGVD 530 + + +K +I +A E ++ Sbjct: 525 KNQGSYYVKNKVSESIVIAKEMDLEDIE 552 >UniRef50_A9AVV6 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVV6_HERA2 Length = 708 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 95/608 (15%), Positives = 191/608 (31%), Gaps = 83/608 (13%) Query: 1 MILERVEIVGFRGINRLSLM-LEQNNVLIGENAWGKSSLLDALTLLLS--PESDLYHFER 57 M + V I FR I L NVLIG+N GKS++L A+T L+ F Sbjct: 1 MKITDVIIKNFRSIEHAQLNGCGDINVLIGKNNAGKSNILLAITTFFEFMERGKLFTFIE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D N + + I + F S ++ Y+P T I L+ + Sbjct: 61 DSKDTINFFNNSEDSIIEISIKFNISQSDIDNLKIYKPENNTKNTYTKLSITIVNLLDKK 120 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM------------ 165 S + ++ + + ++ IN+ +LV+ +L + + Sbjct: 121 SKVNAKILKNITLEGDKSNHELLDIINNNLSNLVQYHIILNYISSETLILNEIKEKNKSG 180 Query: 166 ----------------RRIRNGTVPNVPNVEVTARQLDFL-----ARELSSHPQNLSDG- 203 R N N E+ ++ ELS L+ Sbjct: 181 FEQAISMLNNIIKSNNREHFNDIKKGAKNQELLDNLIEERIKSNNNDELSVIEGILNTTK 240 Query: 204 ----QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGG 259 + + + ++ ++++ + + R + +N + + R Sbjct: 241 HSNIDLEKLILSLKEIVQRISNHFHHIKERRPELDINDANVFLELKKKKASKATLQRIQT 300 Query: 260 RSYRVILLGLFATLLQAKGTLRLDKD-----------------------ARP-LLLIEDP 295 + V+ + + A + LD D RP ++LIE+P Sbjct: 301 IANMVLGITIDAFVEDDNSDPVLDVDNFLIQVNGYGVKEALRIIFDYEIHRPKVVLIEEP 360 Query: 296 ETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 E LHP + L + Q TT+S + V++ LV ++ L Sbjct: 361 ELHLHPSLEMNLMRYLKEISAECQIFMTTHSTNFIDTGDVKN-VYLVSKNESTTVRALN- 418 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 + E + I + S + VEG+ + ++ G + I + Sbjct: 419 ---TEEAASLIPQELGLRLSSLFMYDKLIFVEGKLDEEILRTWTATLGVNLSQHNIGFVT 475 Query: 414 FAQSGLKPLVK------FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 + F + I+ L+D DE ++ ++ + + ++ Sbjct: 476 MEGVFNQTYYAAEATLDFLSKKQIQTWFLIDRDERDQQQIDRIK-----QPLSGKSNVRV 530 Query: 468 LPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRR 527 L ++E++++ F R + I + I + + +R Sbjct: 531 LNKREIENYLFVPRAIAQFLRDKGQISGLQATTEGITEEMIQQQITTCVETCKQQVIEKR 590 Query: 528 GVDSVPTL 535 +P L Sbjct: 591 IAARLPAL 598 >UniRef50_A6WMH3 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=A6WMH3_SHEB8 Length = 569 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 93/570 (16%), Positives = 189/570 (33%), Gaps = 76/570 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES---------- 50 M + VEI +R + L +++IGEN GK++L DAL L L+ Sbjct: 1 MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSV 60 Query: 51 -DLYHFERDDFWFPPGDING--------REHHLHIILTFRESLPGRHRVRRYRPLEACWT 101 D+ DF+ + G + + + T ++ + ++ Sbjct: 61 SDINREAIKDFYQAIINGKGDDEIKALIPKVRVEVEFTDPKNFIEEGVIGKW-----IIG 115 Query: 102 PCTDGYHRIFYRLEGESAEDGSVMTLRSFLD-----------KDGHPIDVEDINDQARHL 150 D ++I Y + D V + + LD + D+ L Sbjct: 116 EEADESYKIRYDFRPK-DADHFVKSAKELLDGIEDIKETRWFNLPIELYDYDVTQSNNGL 174 Query: 151 VRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLS 210 LRL + R+ N T + + L + L S ++ +I + Sbjct: 175 KVSYSDLRLIAINSINAERDDFAEN-----NTQKSNNILTKMLISALEDSDKAKINSAYT 229 Query: 211 AMVQLLEH--YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL-- 266 + +E F + + ++ L + ++ +S L Sbjct: 230 SFFDEIESTETFKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQ 289 Query: 267 --LGL--FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL------LPL 316 LG + + +K+A L IE+PE L L A + L Sbjct: 290 RGLGYRNLVFIYLLFEFFKGNKNALNLCCIEEPEAHLSVNNLRFATDFIYKSTQKGGSSL 349 Query: 317 QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSL 376 Q + +++S ++++ + +V L + L+ +R +F I L Sbjct: 350 QTLISSHSPQVINKLELTNVIVL--SGNEAIHLTDSKKHLTNYLRKRPNFDI----LKLL 403 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG-----I 431 + +LVEG TE +IN + + + ++VI Q+G + ++ Sbjct: 404 LSNKTVLVEGTTEEMLINAILYRNNKNL--SSLEVISIEQTGFITFMDVWLQVNKGKPKK 461 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 + ++ D D+ + + ND R D+ G + HR+ Sbjct: 462 KLSIIRDYDDNNATKDKHQKYDIENDNIRVRTTTQYTLEDDLA------GTAGNLHRLNT 515 Query: 492 IPENVPMNLRKIISKAIHRSSKPDLAIEVA 521 + ++ ++SK + +++A Sbjct: 516 LFNKKCKTPEEM--AKFLKNSKAERMLKIA 543 >UniRef50_UPI0001B42A75 SMC domain protein n=1 Tax=Listeria monocytogenes FSL J1-208 RepID=UPI0001B42A75 Length = 305 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 88/268 (32%), Gaps = 27/268 (10%) Query: 280 LRLDKDARPLLLIEDPETRLHPIML----SVAWHLLNLLPLQRIATTNSGELLSLTPVEH 335 R ++A LLLIE+PE +H Q I TT+S L S +E+ Sbjct: 7 RRSSQEACQLLLIEEPEAHIHAQRQMKLVKSLQREAEANSQQIILTTHSPLLASAVKLEN 66 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + + ++ + L D + ++ + + FAR ++VEG E ++ Sbjct: 67 IILI--KNGNAYPLSKSETSLDENDYIFLERYLDATKANLFFARNVMIVEGPGEALLLPT 124 Query: 396 LARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR------------MGIEWHVLVDGD--- 440 L+R F G+ +++ +GL+ K +R + I+ + D D Sbjct: 125 LSRLLNRDFVDFGVSLVDVRSTGLRRYSKIFQRKNKDNSQYSDDWLNIKVACITDRDIXP 184 Query: 441 EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNL 500 + +N E D + +D+ + ++ Sbjct: 185 NCAPRICLKKEYNDDNTSWPETNDRRWSAESDFSDTQKKVHLNDIKAKADGQNVKTFVSD 244 Query: 501 RKIISKAIHRSS------KPDLAIEVAM 522 R + + K L + Sbjct: 245 RWTLEYDLAYYGLSSEDMKSSLIKAIVK 272 >UniRef50_B6R3J1 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R3J1_9RHOB Length = 612 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 105/308 (34%), Gaps = 16/308 (5%) Query: 163 RFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE 222 RF+ R G + + R S+ + Q R + + Sbjct: 60 RFLSAGRMGIMEQYRSDYDGQRGGSPNYE--SAAFGGKGNTQRRTNFETLTGDFHTLAAR 117 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 Q +R+ + + G + L Sbjct: 118 QDILIKVSERLRKLFRRDISIIWDSGSLKVEFRHEGNNQKYSSAREASGLIHLVGLLAAL 177 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLNLL---PLQ------RIATTNSGELLSLTPV 333 D+ LLI++PE LHP + + + P Q + +T+S E + LT + Sbjct: 178 YDDSVGALLIDEPEVSLHPQLQAFLLKEIKKCSGVPTQDTYKKLIVISTHSTEFIDLTSI 237 Query: 334 EHVCRLVR-ESSRVAAWRLGPSG--LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 + V + ++ P+ L+ + I +LFA+ LLVEG +++ Sbjct: 238 SDLPNFVFCQELGEEPRQISPAENILANRKMSELVTRIGQEHKLALFAKVPLLVEGPSDS 297 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAAT 449 + LA + H +A G +++ G P +VK R +G + VL D D A A Sbjct: 298 IICGGLANKLDLHIEASGAQLLPVIGKGEFPTVVKLMRLLGKDPIVLADAD-AFTDDNAL 356 Query: 450 VRSLLNND 457 + LN D Sbjct: 357 SNTFLNCD 364 >UniRef50_Q0SWM6 Putative uncharacterized protein n=1 Tax=Clostridium perfringens SM101 RepID=Q0SWM6_CLOPS Length = 666 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 70/479 (14%), Positives = 150/479 (31%), Gaps = 54/479 (11%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSP------ESD 51 M L ++ I ++ + + LIG+N GKS+++DA+ + + Sbjct: 1 MKLSKLRIKNYKSFKDSGTIEIK-GNIFALIGQNNAGKSAIMDAIQVFFPNCKKSANSEN 59 Query: 52 LYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 + F ++D +L L F++ + ++ V + + I Sbjct: 60 FHKFTKEDISIELWFSKVNSDYLENKL-FQDKIKKQNEVIKKCIETEKYDKELKKLDEIR 118 Query: 112 YRLEGESAEDGSVMTLR-------------SFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 + + + ++ K+ I D+ L +++P +R Sbjct: 119 EKELNKCILKYGIENEELYVKKIIPKESKAFYILKNNDKISEADLKKILPEL-KIIPAIR 177 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLS--DGQIRQGLSAMVQLL 216 + + ++ A+ + + ++ + + + + + Sbjct: 178 DPKNESTAGTNSYLKDLIQMLDEEAQTEIMMEDKKLTYKELNEVLSEETSKRSKELSSKI 237 Query: 217 EHYFSEQ--GAGQARYRLMRRRASNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLF 270 +Y+S+ + S L I I G +++L L Sbjct: 238 TNYYSKAIGSSDFEVKVNSSVNISKGTNYSTELIDNTTNIKADILDCGTGYQSMVILALL 297 Query: 271 ATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELL 328 T ++ T +L+IE+PE LHP + L + Q I TT+S + Sbjct: 298 ETYVEIAHTNN-----NYILIIEEPEVYLHPRLQRKMIDTLLRVSEHNQVIFTTHSPITI 352 Query: 329 SLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 S V + RE + E + L ++ + VEG+ Sbjct: 353 SKLNSLDVKLVEREYGEAKIKNSSVKEIIDE--------LGVRADDFLHSKGIIFVEGKD 404 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK-----FARRMGIEWHVLVDGDEA 442 + VI EL ++ + I +I+ + I +L D D Sbjct: 405 DEIVIRELLKKLDK-CIIDKINIIQAVGCSNFKWYANAEILINKNFDIPTLILRDSDVE 462 >UniRef50_UPI0001694BEA putative old protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694BEA Length = 626 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 87/589 (14%), Positives = 176/589 (29%), Gaps = 113/589 (19%) Query: 1 MILERVEIVGFRGIN-----RLSLMLEQ---NNVLIGENAWGKSSLLDALTLLLS----- 47 M + + I F+ I ++ +E +IGEN GKSS+L+AL L + Sbjct: 1 MRINELIIKNFKNIGTEKPCKIVFPVEDDSDLISIIGENNIGKSSVLEALRLFMPGYVST 60 Query: 48 PESDLYHFERDD--------FWFPPGDINGREHH------------LHIILTFRES---- 83 P+ +++ F R+ G + ++ + L + T+ + Sbjct: 61 PDLNMFPFRREPQSADHYMEICVTFGGLTEQDLNHKYIKPYVYDGVLRVKRTWSGTGLKD 120 Query: 84 ------------------LPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVM 125 + + L Y R + E + Sbjct: 121 SEVPFEVFIPNRYIEELSDKKTWNAKTFASLSR---DLNRQYELYCTRKGLSAGETITKA 177 Query: 126 TLRSFLD----------KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN 175 F++ + P + N A +MP + A + N Sbjct: 178 NQEDFVEFVYENNAGLIMESEPKWQPNPNGFASKFRSIMPKVIYVPAVKLAEEEASAQKN 237 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDG---------------QIRQGLSAMVQLLEHYF 220 + L S Q +IR+ + Q L+ Sbjct: 238 KSAANLIVSALFDRYLNTSGEIQQFQSAIQAIRNLFSGETAHDEIRRIQDRITQKLKRVI 297 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + + + + G + R+++L L + + Sbjct: 298 EADVEFDFTPPEVMDKLHLNSNILIKYNDFRTAPEHQGNGAQRLLILSLLEMMAEYIKES 357 Query: 281 RLDKDAR----PLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTP 332 + ++ L LIE+PE LHP + + L + Q + T++S + ++L Sbjct: 358 SQETESEWQRSFLFLIEEPEIYLHPQLQRKMRNALVSISKSSHAQVVCTSHSEQFINLAD 417 Query: 333 VEHVCRLVRE--SSRVAAWRL------GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 L ++ + ++ G + D R+ + + + FA +LV Sbjct: 418 RHQGIVLFKKQANGTAKCIQVTGNIYEGETKKDQRDRMRMLLNFTSSTLEAFFAERVVLV 477 Query: 385 EGETETWVINELARQC---------GHHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWH 434 EG+ E I ++ + + I ++ K R GI+ + Sbjct: 478 EGDCEVASIYAISNKLKEIYPDKIEDINQLLHSICIVPCNGKLTQLAFFKVLRHFGIDSY 537 Query: 435 VLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFS 483 ++ D D G ++ N +E T P E ++ Q +S Sbjct: 538 LIHDLD--GHLPNEGNNKIILNGIGSEEYRYTHDPN--FEGDIFDQYWS 582 >UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family n=1 Tax=Thermococcus kodakarensis RepID=Q5JGZ5_PYRKO Length = 653 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 88/604 (14%), Positives = 183/604 (30%), Gaps = 117/604 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + +E+ FR + + + L++ VLIG N GKSSLL AL L +P + + +DF Sbjct: 1 MRIVEIEVNNFRSLRAVKMPLDELTVLIGRNGAGKSSLLQALDLFFNPNAK---YSEEDF 57 Query: 61 WFPPGDINGR--------------------------EHHLHI--ILTFRESLPGRHRVRR 92 + R ++ + I+ F S + Sbjct: 58 YNRDTSKPIRIAIKFRLENDKEREEFQKYVINEDNDHDYIKVVKIMKFPASKSNQSYHGV 117 Query: 93 YRPLEACWTPCTDGYHRI-FYR-----------LEGESAEDGSVMTLRSFLDKDGHPIDV 140 + + + I Y+ L + + + L + + + Sbjct: 118 VKSIPQFSNLPSRKEDLIERYKGLQKEFPDLPHLGSKPTKKKILEALEEYKNSHPEKWEE 177 Query: 141 EDINDQ-----------ARHLVRLMPVLRLRDARFMRRIRNGTV-------------PNV 176 DQ ++ + V ++ + G++ ++ Sbjct: 178 TLQEDQFFGYKEVGHGKIDKFIKFLLVPAVKSVSEETEYKKGSIITELTQLIIEEHIRSI 237 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 P ++ L + L +H + D + + + Q+LE + A + L + Sbjct: 238 PEFNRLEKRYKHLLKSLEAHRKTGKDKLFSELSNELTQILEKFAPNTQANISWGNLDDFK 297 Query: 237 ASNEQRS-WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL-----------RLDK 284 + D +R G + R +L L + + L D+ Sbjct: 298 IPLPVPTVLVTEDGFETSAERVGHGTQRALLFSLLQYMTAKRHELNKMKNVGRDSDEKDQ 357 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--------QRIATTNSGELLSLTPVEHV 336 LL+IE+ E HP L L Q + +T+S L+S + + Sbjct: 358 KLTLLLVIEELELYQHPQRQKHLHKLFKDLAGNTFGGFNIQVMYSTHSPFLISTDTFDSL 417 Query: 337 CRLVRESSRVAAWRLGPSGL----STEDSRRISFHIRFNRP---------------SSLF 377 R+ ++ + +L + + E + + + + F Sbjct: 418 -RVFKKIKTQKSRKLRETKIYWYPQQELQKDLKRYGIDSPSKHVKKFTTTVNPVMSEGFF 476 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK-PLVKFARRMGIEWHVL 436 A +LVEGE++ + +A G + I +I G I + + Sbjct: 477 ADKVVLVEGESDRAALEVVAEHNGVDLNGNNISIIPVGGKGNILTAYLMFNGFNIPTYPI 536 Query: 437 VDGD--EAGKKYAATVRSLLNNDREAEREHLT---ALPALDMEHFMYRQ----GFSDVFH 487 D D R + A+ ++E + + +F Sbjct: 537 WDLDLYPDEMNKKLFSAVQYKTKRTPTSPIVRKNFAVFNKNLEDVIKNDLGEKNWGVLFS 596 Query: 488 RMAQ 491 ++ + Sbjct: 597 KLKR 600 >UniRef50_B2DN28 RecF/RecN/SMC N domain protein n=2 Tax=Streptococcus pneumoniae RepID=B2DN28_STRPN Length = 529 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 87/573 (15%), Positives = 185/573 (32%), Gaps = 76/573 (13%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++ R+ + F+ + + N+ +GEN GKS+LL + L+LS Sbjct: 1 MISRIILQNFKRYQNVDFTCNSEVNIFVGENGAGKSTLLYGIGLVLSGSHSQIERSSLSS 60 Query: 61 WFPPGDING--------REHHLHIILTFRE---------SLPGRHRVRRYRPLE-ACWTP 102 I + + I + F E ++ G+H ++ + + Sbjct: 61 IINQEAILEFMGTRDINQLPEVFIEIYFDELSTEISSNFNIEGKHNSQKIKAFGLSLKII 120 Query: 103 CTDGYHRIFYRLEGESAEDGSVMTLRS--FLDKDGHPIDVEDINDQARHLVRLMPVLRLR 160 Y + +S FL G + + H + ++ Sbjct: 121 PNQDYIAEITSVLNDSKWTVFPFEFYRVEFLTFSGKTYSSYNKPYKFLHSMINTSLI-DT 179 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF 220 +RI EV + R +H ++ + L L E+ Sbjct: 180 QQEIQKRIH----------EVYLDNISAENRAKVNHQYRINSFNFLKTLRKDELLKEN-- 227 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + ++L + N R+ I G +LLG+ K T+ Sbjct: 228 ------ASEFQLHFDESENSFRNSVSAVKNGVDIKNLGQGEK--VLLGVENAYSHLKETV 279 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL-QRIATTNSGELLSLTPVEHVCRL 339 + +LLIE+PE L L +L+ Q T+S + S V+++ L Sbjct: 280 K-------ILLIEEPENHLSFQNLQKLVRMLSSNTGVQVFIGTHSNMIASRLGVDNLLFL 332 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 ++ +++ + GL + R N + + +LVEG E ++ + Sbjct: 333 --DNGQISKLK----GLKKDTVRFFKKSTNQNLLNFSLGKKIILVEGNAEYILVEKFFEI 386 Query: 400 C-GHHFDAEGIKVIEFAQSGLKPLVKFARRM-GIEWHVLVDGDEAGKKYAATVRSLLNND 457 + + +I + ++ A + V+ D D Y + V+S ++ Sbjct: 387 LHSKKPEEFNVSIISVDGLSFERYLEIATNFTDKKVVVITDND---GDYESKVQSKYSSY 443 Query: 458 REAEREHLTALPALD---MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKP 514 ++ + +++ D E +Y SD+ N + K Sbjct: 444 QQFQNIKVSSDLDNDNRTFEICIYNCN-SDLLESSGLTKSNDLL--------EYMLREKA 494 Query: 515 DLAIEVAMEAGRRGVDS---VPTLLKKMFSRVL 544 + A+ + + + +P +K+ ++ Sbjct: 495 EFALRLLEQMETDNIREKFIIPNYIKEAIEWII 527 >UniRef50_UPI0001BC2E28 plasmid-related protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2E28 Length = 537 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 103/341 (30%), Gaps = 41/341 (12%) Query: 131 LDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQL-DFL 189 L V + R V+ + V RD V + + Sbjct: 31 LYDSYSEDRVHTLPAAERSRVQFVYVPASRDG-------AKQVSGFLRGRLWKAAIWSKG 83 Query: 190 ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE-----QGAGQARYRLMRRRASNEQRSW 244 R+L GQ + + +E F + QGAG + + + Sbjct: 84 LRDLVGKVAADVSGQFHK--EVATKTVEDAFGKRWQQLQGAGTHSQPRFQPLEPDIDQFL 141 Query: 245 RYLDII--------NRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK-----------D 285 R ++ R ++ L L L + ++ D Sbjct: 142 RGAELTFEPDPSSPARPARLLSDGQRSLLHLALTTATLDLERSITTDPTSGFDPEAVYIP 201 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVR 341 A +L IE+PE L P LS L+ L +Q + +++S L V R Sbjct: 202 ALTILAIEEPENSLSPYYLSRIICQLHDLAATTQVQALLSSHSASALGRIDPRSVRH-FR 260 Query: 342 ESSRVAAWRLGPSGLSTEDSRRIS--FHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 + + P L D + P FAR +L EG++E VI LAR Sbjct: 261 QHPVTGESNVRPITLPEHDIAAATYVREAVRAHPELYFARFVVLGEGDSEHIVIPALARA 320 Query: 400 CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 G D + ++ + + I L+D D Sbjct: 321 LGIELDPSFVAMVPLGGRHTNHFWRLLTDLQIPHATLLDLD 361 >UniRef50_D2UFF3 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UFF3_XANAL Length = 616 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 90/575 (15%), Positives = 185/575 (32%), Gaps = 83/575 (14%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLS------------ 47 M L V + FRG + R + ++ IG+N GKS++L+AL + + Sbjct: 1 MKLSAVILENFRGYSQRTRIEIDDLTAFIGKNDAGKSTILEALDIFFNDGKPERGDACVH 60 Query: 48 PESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEA--------C 99 + P + H + + G + + A Sbjct: 61 STDTMIRIGCAFASLPTEIVLDAAAHTSLAAEHLLNEKGELEIIKEWDSSAKTPKESVFA 120 Query: 100 WTPCTDGYHR----------IFYRLEGESAEDGSVMTLRS--------------FLDKDG 135 + R++ ++ +V + L++ Sbjct: 121 IAMHPTNADATDLLTLKNSDLKARVKKLGIDESTVSLAINGSMRQAIREACHPLTLERKS 180 Query: 136 HPIDVEDINDQARHLVRLMPVLRL-RDARFMRRIRNGTVPNVPNVEVTARQLDFLARELS 194 P+D ED L +P+ L R R + P + L LA +L Sbjct: 181 LPLDKEDAKKVWEQLRPQLPMYALFRSDRPSQDGDEEVQS--PLKFAITQALKELADDLK 238 Query: 195 SHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMI 254 + ++R A L + + + + + + + I Sbjct: 239 KIEDAV---RLRAEDVAKRTLAKLNEMDGRLASELKPFFKADPKWDVFKFGLVGDNDIPI 295 Query: 255 DRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL 314 ++ G R+ILL F + + T + + IE+PET HP + L L Sbjct: 296 NKRGSGVRRLILLNFFRAEAERRRTEKGALSV--IYAIEEPETSQHPDNQRLLVQALKEL 353 Query: 315 PL----QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRF 370 + Q + T+++ L L P + + + +++ AA S S +D I+ + Sbjct: 354 AIDENTQVLVTSHTPGLAGLLPSDSLRCVRKQADGTAA----VSHCSDDDLVVIANELGV 409 Query: 371 ---NRPSSLFARCWLLVEGETETWVI--------NELARQCGHHFDAEGIKVIEFAQSGL 419 R L + VEG + + +A D+ + ++ + L Sbjct: 410 LPDRRVQVL-----VFVEGTNDIEFLEGISAMLKPSMADVVDFTSDSR-VALVPLGGASL 463 Query: 420 KPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 K V + + +G+ + D D+A +N ++E+++ Sbjct: 464 KQWVAKHYLKNLGLPEVHIYDRDDANPPKYQPECDAVNA--RTNGSWAVITTKRELENYL 521 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 + S+ + + + I++KA+H +S Sbjct: 522 HADAISEGMNGIGITFTDTCDVP-LIVAKAVHEAS 555 >UniRef50_B4SKF9 OLD family ATP-dependent endonuclease-like protein n=4 Tax=Proteobacteria RepID=B4SKF9_STRM5 Length = 604 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 84/486 (17%), Positives = 162/486 (33%), Gaps = 54/486 (11%) Query: 2 ILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 + ++ I FR I R + + L+ VL+G N GKSS+L A L++ + +D Sbjct: 24 RMHKLVIRNFRAIGRQAVEIELDDIVVLVGANNTGKSSILRAYQLVMESGAKG-DLLAED 82 Query: 60 F---WFPPGDINGREHH-LHI-ILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR- 113 F + ++ + + + + F +S P P + +G + R Sbjct: 83 FPGGYVTGAELKDEDMPSIELETVLFADSKP---------PADKWIDVRPNGDRHVRERW 133 Query: 114 ---LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRL-MPVLRLRDARFMRRIR 169 G+ + G + L ++ G + R+ + A + + Sbjct: 134 TWCCPGKPKKRGFNVELNAWDANHGPWGTASVAQSNRPEMHRIEAFDDPKKQADSIISLL 193 Query: 170 NGTVPNVPNVEVTARQLDFLAREL---SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + + +L + Q + + + + L ++ G Sbjct: 194 EEATKQRVKALIEEEGKEGAYAKLLAGVAELQKAVATEAMEAIDEVRLELVRAMADVFPG 253 Query: 227 QARYRLMRRRASNEQRSWRYL-----------DIINRMIDRPGGRSYRVILLGLFATLLQ 275 + R + RS + D ++R G + R L A + Sbjct: 254 YSITLDARPE-DDLSRSISFFKAPPVLRMGPADGHQSDLERQGSGARRT--LMWNALRII 310 Query: 276 AKGTLRLDKDARP-LLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELLSL 330 A RP +LL+++PE LHP + A ++L LP Q + TT+S + L Sbjct: 311 ADHKAGAKGTERPHVLLLDEPELCLHPAAVRDACNVLYSLPGGKTWQVMVTTHSPAFIDL 370 Query: 331 T-PVEHVCRLVRESSRVAA----WRLGPSGLSTEDSRRISF--HIRFNRPSSLFARCWLL 383 + + R+ R + + +R + L ED R+ F ++ Sbjct: 371 SRNNTSIVRVERSQAGTVSGTTIFRPDRARLGDEDKERLKLLNMYDPYVAEFFFGGRTVI 430 Query: 384 VEGETETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEA 442 VEG+TE E+ + ++ + L K + + VL D D Sbjct: 431 VEGDTEYAAFREV--IADDPAKFHDVHIVRARGKYTIVALCKILNQFKCSYSVLHDADLQ 488 Query: 443 GKKYAA 448 K Sbjct: 489 RSKNRK 494 >UniRef50_C7NT09 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NT09_HALUD Length = 529 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 94/538 (17%), Positives = 182/538 (33%), Gaps = 34/538 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + + ++ I +L + N++IG+N GKSS+L+A+ LLL ++ ++ DF Sbjct: 1 MRISSFSVRNYKAIKEQTLEFGEYNIIIGKNDVGKSSVLEAIDLLLKFDTP----DKSDF 56 Query: 61 W--FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 I I T +E L + + A +T + Y + GE Sbjct: 57 HMLDESNTIILCCEFEEISDTLKEMLTDDYLDGDNLSITARYTSSSGRTPDGLY-INGEE 115 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARH-LVRLMPVLRLRDARFMRRIRNGTVPNVP 177 E G++ D + D + + L + VL RD + G+ Sbjct: 116 IESGAI-------QIDEEELSKSDSREYIKEQLSETVTVLAERDHESETSLTQGSWLTRV 168 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 V + + L+ Q + ++ L + L S+Q + ++ Sbjct: 169 MSPVFS------SDNLNEQKQKI-RSELEDELEEIKASLNEVLSDQHSHINDVQIELGDI 221 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + +++ + +D S R +G L K + D +L E+PE Sbjct: 222 DLSKAVSPKIEVRDDNVDEWMPLSERGSGVGNQFILSMMKSYADSELDDGYYVLYEEPEN 281 Query: 298 RLHPIMLS---VAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 LHP + A + Q I TT+S L+ + + + Sbjct: 282 SLHPSAVREMDQALREIASQGNQVIITTHSQSLIDTHENGSLIVASNDDGEAEFKHVKDD 341 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF 414 G ++ I L + L EG ++ VI + + +D + V Sbjct: 342 GFEAIEA------IGAKNSDILQSDYVLYTEGASDAAVIEVICQHEFDDWDGINVTVQPA 395 Query: 415 AQSGLKPLVKFARRMGIEWHVLVDGDE--AGKKYAATVRSLLNNDREAEREHLTALPALD 472 L+ ++ + + +L+D D G + L++ + + L + Sbjct: 396 GGGNLRHQLENMKHINRNSGILIDSDRTSEGGELGDQSALLVDEADRIDLDRW-VLERRE 454 Query: 473 MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVD 530 +E++ + DV I I+ + K A ++A GVD Sbjct: 455 IENYFHADAIEDVLEVSESINIGHYDEAEDILEDYNYDDGKVQNARDIAQVMYEIGVD 512 >UniRef50_B0SBA1 ATP-dependent endonuclease n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBA1_LEPBA Length = 458 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 80/465 (17%), Positives = 159/465 (34%), Gaps = 27/465 (5%) Query: 1 MILERVEIVGFRGINRLSLMLE--QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 + +E +EI+ FR I S+ + NV++G N GKS++L AL L + D + + Sbjct: 2 IKIEHIEILNFRSIVSESIKFGCKEYNVIVGANNSGKSNILRALELFFNGTIDRKKYSFE 61 Query: 59 -DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF + + + I ++ + + + + + + Sbjct: 62 LDFPKATSILAKQTTQISIEFSYDPNKEKKIDLALTDIEKNTKQKRLSNNRLLLRLRLNK 121 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM--RRIRNGTVPN 175 S E R+ + ++ I D + VR + RD R I V Sbjct: 122 SGEPQWNFIGRAGNLNIKQEL-IDKIVDVVLNSVRFKYIPIGRDILHTIQREISEELVRT 180 Query: 176 V--PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + + + + LS+ +L Q+ ++ L+ FSE + + Sbjct: 181 IFSGWSGSSVKYRQKINTSLSNLIDDL-KPQLSASSQSITNSLQQVFSEIKELELKLPFD 239 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 + D +D G LL L R + + IE Sbjct: 240 SVESMLTFLIPDLTDHYKTSLDSKGAGIQTSSLLFFLKYLAD-NHPQRHNAVTTFIWAIE 298 Query: 294 DPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 +PE+ LHP+ +L +Q +T+SG ++ + LV E A + Sbjct: 299 EPESFLHPLKQRGVSQILKEFSREVQTFISTHSGNFVNQEQETQL--LVVEKDSSAPYST 356 Query: 352 GPSGLSTEDSRRISFHIRFNRPSSLFARCW-LLVEGETETWVINE----LARQCGHHFDA 406 + + + + S+F + +++EG ++ + L + + Sbjct: 357 I---IKSNKYDDARESLGVSLIDSMFLKKTNIILEGPSDEILFQGSLLKLHEGKKINLNP 413 Query: 407 EGIKV-----IEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKY 446 E +K A + + + +++DGD+AGKK Sbjct: 414 EDVKFFTGNNCNSACLLFEAYYPLTKTGEVRNILIIDGDDAGKKA 458 >UniRef50_B1KR76 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=B1KR76_SHEWM Length = 773 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 80/568 (14%), Positives = 174/568 (30%), Gaps = 110/568 (19%) Query: 1 MILERVEIVGFRGINR--------------LSLMLEQ---------NNVLIGENAWGKSS 37 M LE + I +R +S+ +Q ++IG+N GK++ Sbjct: 1 MYLESLTIKNYRKFRDTDNTVCFVKPEVVDMSVEEDQPESSVIAPSTTLIIGKNNAGKTT 60 Query: 38 LLDALTLLLSPES------------DLYHFERDDFWFPPGDING--REHHLHIILTFRES 83 +++AL +L + E +L++ + DF +L L + Sbjct: 61 VVNALKMLCNNEQPSASDFNLSYLNELFNQYKQDFEADQLTKFKSLATPNLEFGLRVKVD 120 Query: 84 LPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFL----DKDGHPID 139 + P ++ ++ AE+ + S + +G ++ Sbjct: 121 FNDEDLMTHLAPFIPISEEGNGKPVSVYIVVKVALAEESAFKEEASKIFKATGSEGQELE 180 Query: 140 VEDINDQARHLVR-----------------------------LMPVLRLRDARFMRRIRN 170 ++ L+ L ++ +++ + R ++ Sbjct: 181 SNQRFEKFYALLSKESSVIQTEGNLYQIVFMDLLGDATEKFSLKKLINIKEIKANRHLKE 240 Query: 171 GTVPNVPNVEVTARQLDFLARE--LSSHPQNLSDG---QIRQGLSAMVQLLEHYFSEQGA 225 G + +V N V + + ++ L + ++++ + + + Q+L S Sbjct: 241 GVLSDVFNKIVAFQFANDVSSRSSLEASIESINKKISDNVGAKSTDISQVLGKVESTNKV 300 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMI--DRPGGRSYRVI-LLGLFATLLQAKGTLRL 282 + A + I D+ G ++ ++G + + Sbjct: 301 NLNLSGNVTYEAIMKGLIKYNFMDDADFIPEDQFGLGYINLLNIIGEIIHFVDSYEENSH 360 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLL------------------NLLPLQRIATTNS 324 LL IE+PE +HP M + L Q TT+S Sbjct: 361 LSRIN-LLFIEEPEAFMHPQMQEFFIKRIDNAVKKAVEIANASSQDPKTLQCQIAITTHS 419 Query: 325 GELL-----SLTPVEHVCRLVRESSRVAAWRLGPSGLSTED-------SRRISFHIRFNR 372 ++ S + L + A L + + D I HI++ Sbjct: 420 SHIVNSKIHSSNTFNSINYLTSINKCTKAINLTDEAVVSSDDSDANKKLNFIKKHIKYKV 479 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 F+ + VEG TE ++N I V + K + A+++ + Sbjct: 480 SELFFSDAVIFVEGITEETLLNYYLE-NHQSLSEYYISVFNINGAHGKLYLPLAKKLSVP 538 Query: 433 WHVLVDGDEAGKKYAATVRSLLNNDREA 460 ++ D D +K + + EA Sbjct: 539 SLIVTDLDIKREKCEKGEKHKKDESCEA 566 >UniRef50_A5TT00 Possible ATP-dependent endonuclease n=12 Tax=Fusobacterium RepID=A5TT00_FUSNP Length = 438 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 127/329 (38%), Gaps = 23/329 (6%) Query: 196 HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID 255 + + + + ++ +S + F++ + ++ + + Y N + Sbjct: 106 NWEEIEEKDYKKYVSEISIFYVPAFTKISYLNYLVERLFQKENLRKYYKYYKKFKNAINS 165 Query: 256 RPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL---N 312 + YR I + +++ + + ++ +LL E+PE L+P + L Sbjct: 166 KMSFGYYRHIFIEFLHEIVEKEKSHTFWENC--ILLWEEPEFYLNPQQERACYDALLQNT 223 Query: 313 LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDS--RRISFHIRF 370 L L I +TNS + L + +C R V ++ + S ++ +++ I Sbjct: 224 KLGLMAIVSTNSSRFIELENYQSLCIFRRVKEDVEIYQYSGNLFSGDEVTVFNMNYWINP 283 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQCGH-HFDAEGIKVIEFAQSGLKP-LVKFARR 428 +R FA+ +LVEG+T+ V++ LA+ G ++D ++E P ++ Sbjct: 284 DRSEIFFAKKVILVEGQTDKIVLSYLAKNLGIFNYDY---SIVECGSKSSIPQFIRLLNA 340 Query: 429 MGIEWHVLVDGD-----EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFS 483 I + + D D + +T+++ + ++ D+E +Y + Sbjct: 341 FHIPYVAVYDKDNHYWRNETELENSTLKNKMIQKLVWKKLGEWVEFENDIEEEIYNESRD 400 Query: 484 DV------FHRMAQIPENVPMNLRKIISK 506 F+ + + + + +++ K Sbjct: 401 KKNYKNKPFYALETVINSNYIVPKRLEEK 429 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 29/168 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L +V+I ++ + ++L + V IG ++ GKSS + AL LY F+ + Sbjct: 1 MQLLKVQIKNWQTFSNVNLECKDFLVFIGASSTGKSSFMKAL---------LYFFQARNL 51 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 DI L II T + G R + Y Y ++ Sbjct: 52 HDR--DIRNPNLPLEIIGTLK-GEKGHIFQLRILN---------NPYQSTRYFIK----- 94 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI 168 + ++ +++ I+ +D + + V ++ + Sbjct: 95 --NHISKHEKDNRNWEEIEEKDYKKYVSE-ISIFYVPAFTKISYLNYL 139 >UniRef50_Q7N8W7 Similar to unknown protein n=10 Tax=Bacteria RepID=Q7N8W7_PHOLL Length = 522 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 92/537 (17%), Positives = 169/537 (31%), Gaps = 86/537 (16%) Query: 3 LERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESD---------L 52 + R+ + F+ L L + N+L+G N GKSS+L A+ + L+ L Sbjct: 4 IRRLVLKNFKRFKNLELEFDPELNILVGGNEAGKSSVLQAIDIALNASRSKVESLGLETL 63 Query: 53 YHFE-RDDFWFPPGDING-REHHLHIILTFRE---SLPGRHRVRRYRPLE-ACWTPCTDG 106 ++ E +F I E + + L E L GR+ + L D Sbjct: 64 FNMECISEFLKGERKIVELPELLIEVYLDGIEGHHELDGRNNSKSIDHLGIKLVCKPVDK 123 Query: 107 YHRIFYRLEGESAEDG--SVMTLRS--FLDKDGHPIDVEDINDQARHLVRLMPVLRLRD- 161 Y + + E ++ ++R F D+ P + ++ R+ Sbjct: 124 YTQEIQTILAERHDNFPFEYYSIRFLTFTDETILPYKKPLQHLLIDS-SQINSEYATREY 182 Query: 162 ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFS 221 R M V + + R + M L+ Y Sbjct: 183 TRTMYTTHASVVERNHHSFEYRKAKSEFKRVV---------------FKTMNDALDIY-- 225 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 +R + + + ID G ++ + LR Sbjct: 226 --------KFDVRTSPKASVETDIIITEGDIPIDSKGKGR---------QCFIKTEFALR 268 Query: 282 LDKDARPLLLIEDPETRL-HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLV 340 + +LL+E+PE L H M + + + Q T+S + + ++ V L Sbjct: 269 NREHVLDILLLEEPENHLSHVHMHKLIDRIRGSVKKQLFIATHSSLIATRLNLKKVLILS 328 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 E+ + LS + N + +LVEG+ E +++ L + C Sbjct: 329 EEN---LSQPTSLKDLSQSTANFFMKAPDNNVLELALCKKAILVEGDAEFILMDALYKNC 385 Query: 401 --GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDG------------------- 439 G D +GI VI + K ++ A+ +GI+ + D Sbjct: 386 TGGASTDTDGIYVISVDGTSFKRYLELAKLLGIKVAAIRDNDGDYKSNCVTNYADLISDS 445 Query: 440 -----DEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 D +Y V +N E + L +E +M + F + Q Sbjct: 446 VQIFADADDARYTFEVCIYQDNTTICEGQFAAGRKKLTVEEYMLKNKTEAAFELLEQ 502 >UniRef50_B0S1X8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0S1X8_FINM2 Length = 542 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 83/566 (14%), Positives = 176/566 (31%), Gaps = 49/566 (8%) Query: 2 ILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLL---------SPES 50 ++++V I F+ L L N+L+G N GKS++L+A+ L L + E Sbjct: 1 MIKKVRIKNFKCFKDWFELDLNGGINILVGNNEEGKSTILEAIHLALTGFYRGNYINREL 60 Query: 51 DLYHFERDDFWFPPGDINGREH----HLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 Y F R+ +IN + I + F E Sbjct: 61 SQYLFNREVVEEYLTNINSNSPCALPEIIIEIYFSELDDANLEGS---------GNDLGL 111 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 I + + L + + I + R+ R Sbjct: 112 KEEIGFAFKVLFDNSYEDE---YKLFMEKGELSSLPIEYYKSEWLGFN-----RENITTR 163 Query: 167 RIRNGTV----PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE 222 I + + + + + + + + R + +S + + E + Sbjct: 164 GIPSKSFLIDNSSYKYKDGSDQYISNMIRGTLDNEDLISISKAFRETKDDFSKNESVKNI 223 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + ++ S + + MI Y GL L + Sbjct: 224 NEKLSESKSNLGKKVSLGVNLGSNFNWESSMITEFDSIPYSNAGRGLQCLLKTELALNNI 283 Query: 283 DKDARPLLLIEDPETRLH----PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 + + ++LIE+PE L ++++ N Q I +T+S +L+ +E++ Sbjct: 284 NTNKDKIILIEEPENHLSYSNMNNLINILQENSNKESNQIIISTHSSLVLNKLGLENLIL 343 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L + S + LS++ + ++ L +LVEG ++ +I + Sbjct: 344 LSNKKSS------KITNLSSDTEKYFKAVSGYDTLRVLLCDKAILVEGPSDELIIQRAYK 397 Query: 399 -QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNND 457 + G GI +I + ++ ++ + +V+ D D + + +++ Sbjct: 398 DRYGKLPIFNGIDIISV-GTSFLRFLELGDKLDLNLYVVTDNDGDVEALIRKYKDYESSE 456 Query: 458 REAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLA 517 + DM+ F Y + N N K S +I + K + Sbjct: 457 KIKIYYDEKTYSG-DMDKFNYNTLEPCILRANDLKTLNSIFNTNKKDSDSILKYMKKNKT 515 Query: 518 IEVAMEAGRRGVDSVPTLLKKMFSRV 543 P + ++ V Sbjct: 516 NCAVSIFESESKIKYPEYINRVIEDV 541 >UniRef50_D1SMA1 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SMA1_9EURY Length = 345 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 19/258 (7%) Query: 289 LLLIEDPETRLHPIMLSVAWH-LLNLLP----LQRIATTNSGELLSLTPVEHVCRLVRES 343 ++L+++P LHP+ + L Q I T+S + L +++ R +E+ Sbjct: 23 VILLDEPALHLHPVYQKKLLKDVFEKLNENGNNQIIIITHSPYFIDLKTLKNTFRFYKEN 82 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH 403 S+ + + + + + R LFA +LVEG +E I L R+ + Sbjct: 83 SKTKVINVEELLNGIINLKDFTKNDALIRS--LFANGVILVEGVSEFLSIPILLRKLNYA 140 Query: 404 FDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAER 462 + +++I +G + V+ + I V+ DGD A Y N Sbjct: 141 LEDYNLEIINVESKTGFEKYVRLMNSLKIPCAVVCDGDTAYNLYNKDGGKWKLNKNLP-- 198 Query: 463 EHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAM 522 + + + + ++ + EN + + + I + K + Sbjct: 199 HIINIYKKIK---PFWVKDKDIDIDKILEDIENKIATKKSSLEEEIDKDDK------LEE 249 Query: 523 EAGRRGVDSVPTLLKKMF 540 E RG+ + +K + Sbjct: 250 ELVERGIKPIYEEIKDIL 267 >UniRef50_C0E1U9 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E1U9_9CORY Length = 538 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 89/562 (15%), Positives = 176/562 (31%), Gaps = 65/562 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLL------------- 46 M++ ++ I G+R + N+++G N GKS+LL+A++L L Sbjct: 1 MMITKIHIQGYRKLKEFLFEPNNGMNIIVGGNDAGKSTLLEAISLCLTGRINGQRASDVL 60 Query: 47 SPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGR--------HRVRRYRPLEA 98 +P + F + + I L E G + R + Sbjct: 61 NPYWFNTELVAEFFAARKNNQTVPPPEIRIELHL-EVSKGELENMRGVNNMKREDAAGLS 119 Query: 99 CWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 W Y + + ++ + + + + Sbjct: 120 MWIHPDPEYLEELDEYFSQVDCPPIIPIEYYLVEWKNFAGTIIFNRPKGLGVAVINSRT- 178 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 +R R M + + + + ++ R+L ++ + I L Sbjct: 179 IRSDRGMDFYTKQLLESKLDPK-DRNKVSVKHRQLRNNLGSELIEDINTSLH-------- 229 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR-PGGRSYRVILLGLFATLLQAK 277 E + R + ++ RS + + IDR P S + + + +A Sbjct: 230 ---ENLSPSESGRWLVGLQIDQSRSTSWESTLIPEIDRIPFSMSGQGAQV-----IAKAS 281 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL--NLLPLQRIATTNSGELLSLTPVEH 335 L +D+ LLIE+PE L L ++ N + Q TT+S +L+ + Sbjct: 282 LALSQSEDSTSFLLIEEPENHLTHTRLRELLSIIERNSMGRQVFITTHSSYVLNRLGLNQ 341 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + L S + SGLS E + F+ + A ++VEG ++ + N Sbjct: 342 LVLLHGGSHKSF------SGLSKETTEYFQLISGFDTLRLVLADKMVIVEGPSDEIIFNH 395 Query: 396 LAR-QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKY-------- 446 + + G A GI V+ + + A + + L D D ++ Sbjct: 396 FFKDKYGREPMAFGIDVMSIRGTSFLRSFELASLLDRQLIALRDNDGQEPEHWIKRLEPF 455 Query: 447 --AATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + + N + L A H G D ++ ++ +N I Sbjct: 456 LLEGKRQMFIGNPEDGRTLEPQILTAN--PHLCETNG--DYEKKLKKMQDNKTATALNIA 511 Query: 505 SKAIHRSSKPDLAIEVAMEAGR 526 + P +A Sbjct: 512 QSDEKLTPPPYFKEAIAALMKN 533 >UniRef50_Q3EQP6 Putative uncharacterized protein n=3 Tax=Bacillus thuringiensis RepID=Q3EQP6_BACTI Length = 675 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 74/536 (13%), Positives = 172/536 (32%), Gaps = 98/536 (18%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLY-----H 54 M+L+ + I +R S + + +L G N GK+S+++ + ++ + Sbjct: 1 MLLKEIIIKNYRKFKNESFSMADDITLLAGANNSGKTSMINLMGSIMQSGKTPFCISDIP 60 Query: 55 FERDDFWFP---------PGDINGREHHLHI--------------------ILTFRESLP 85 + W + + + ++ F+ Sbjct: 61 VKLSKKWVDEVYEIFVRCFDEDVLSTVEMIVHELFGDELSSLKGDLIIPATLIRFKIEYT 120 Query: 86 GRHRVRRYRPL---------------------EACWTPCTDGYHRIFYRLEGESAEDGSV 124 +R++ ++ D Y++++ R + + +GS Sbjct: 121 ETDDIRKFADFIMDLDPDNKNFYFEYLFQPTRKSFREALEDNYNKLYARYKKIKSLEGSS 180 Query: 125 MTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL----------RLRDARFMRRIRNGTVP 174 ++ F + + I + + RL + +++ R Sbjct: 181 SKVQQFKEIILSIYEASIIEK--CYFSDRNYIDKVEIDVSIFRRLFNYKYINAGRPLDDQ 238 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDG--QIRQGLSAM--------VQLLEHYFSEQG 224 + N + ++ + LA S+ L + QI + + + + Sbjct: 239 SNGNFKSLSKNMIELATHNSNLNTLLEELPDQILSPIQDARIIEEVRSASVRNLSNTVKT 298 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL------LGLFATLLQAKG 278 +A + + + + I + IL LG + Sbjct: 299 ISKASGGNTGSMILDIDINEETITSLLNQITNTKYQYEGYILDEASQGLGYSNMIYILLQ 358 Query: 279 TLRLDKDARP----LLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSL 330 + P L +IE+PE+ +HP M + L +Q + TT+SGE++ L Sbjct: 359 LETYQRKIDPLVVNLFVIEEPESHMHPQMQRIFGKHLKKYYLQKKIQGLITTHSGEMVRL 418 Query: 331 TPVEHVCR---LVRESSRVAAWRLGPSGLSTEDSRRI--SFHIRFNRPSSLFARCWLLVE 385 T ++++ L S++ + + LS + + + +FA +L E Sbjct: 419 TEMKNLRVSRPLNHLESKIYDFSIFKESLSGDITLDTFYDWFYEIGFSEIVFADRVILYE 478 Query: 386 GETETWVINELARQCGH-HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 G+TE +I +L + + + I ++ + K + I+ +L D D Sbjct: 479 GDTERLLIRKLLTLDAYEELNQKYIAYVQVGGAYAHKYSKVIDFLKIKTLILTDLD 534 >UniRef50_A8T0E4 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0E4_9VIBR Length = 553 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 81/488 (16%), Positives = 172/488 (35%), Gaps = 56/488 (11%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPE---------- 49 M +E++ I F+ I E+ N+L+G+N GK+++L+AL L+ S Sbjct: 5 MYIEKLTIKNFKKIESGEYEFNEKVNILVGDNDSGKTTILEALELVSSSNYRGKSINSSL 64 Query: 50 -------SDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 + + D + E + L+ G++ + Sbjct: 65 SPQLFNNKAVRTYLEGD----LSKGSLPEILIEAYLSGCPEYRGKNNSQNKEYEGVFIKI 120 Query: 103 CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA 162 C D Y +SA+ S+ T F + E I +R + L + R Sbjct: 121 CFDEDLTSTYEEFCKSAKVESIPTE--FYKVEWFSFSWEPIKFLSRKVKGLF-IDPTR-- 175 Query: 163 RFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE 222 + + N+ N +T Q L ++ Q + + +Q + + L+ SE Sbjct: 176 LHPTYGKTQYLSNIINSSLTKEQQALLH---LNYRQLKNSFEEQQQIQDLNNDLD---SE 229 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + ++ S + L + + G I + L L Sbjct: 230 NQVTEQNLSIIADTNSGTVEAGLQLAVDEVSFNHIGKGEQNKIQVKLAL----------L 279 Query: 283 DKDAR-PLLLIEDPETRL-HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLV 340 +K + +E+PE L H + + + Q TT+S +L+ + H+C + Sbjct: 280 NKGGNVNFVTVEEPENHLSHTNLSRLVKFISENTNNQIFITTHSSYVLNKLSLNHLCLIS 339 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE-LARQ 399 + L + + ++ + ++ + ++ +LVEG ++ ++ + + Sbjct: 340 DD-------YLRLKEIDSGTAKTLQRLPGYDTLRIVLSKKVILVEGPSDELILKKKYLQD 392 Query: 400 CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 + +GI +I G K ++ A+ +G + +V+ D D Y + NN Sbjct: 393 NKRLPEEDGIDIIVVRGIGFKHYLQIAKLIGTKVNVVKDND---GSYQTNIVDYANNFNF 449 Query: 460 AEREHLTA 467 + + Sbjct: 450 KNIKFFSE 457 >UniRef50_C1QGC1 RecF/RecN/SMC N-terminal domain-containing protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGC1_9SPIR Length = 628 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 79/503 (15%), Positives = 166/503 (33%), Gaps = 83/503 (16%) Query: 1 MILERVEIVGFRGINRLSLMLE---QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + + I ++ I + + L+ L GEN GKS+++D + L + + +L FE+ Sbjct: 1 MYIRELIITNYKNIKNVKIDLQHEYSMIYLTGENGIGKSNIIDIIFKLFTYKKNL--FEK 58 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPG---RHRVRRYRPLEACWTPCTDGYHRIFYRL 114 +DF+ I E + + L E R + + + D Y + L Sbjct: 59 EDFYKNEEKI---EIEIKLELETNEIFKDYLYRDNNKYFMKIVYKQYSSNDEYEWFYKNL 115 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP 174 E +++T D + +++ + + + + + + N Sbjct: 116 TEEYKLLNNILTNFICYKYSPREFDNNFMFNKSNRIGKFLSKIIENQIKKYQNDDNKLQK 175 Query: 175 NVP-NVEVTARQLDFLARELSSHP--QNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 + N E +L+ + + + + P + + +I + +++L E + Sbjct: 176 LLKENYENCKNELNEIFKPIFNKPNQELKLNIEIDDEIKFLLKLFELVHYHNDDNKLYLN 235 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP--L 289 + R GR Y + F L K + + Sbjct: 236 QLGR-----------------------GRGYYLYPFIDFLAFLYDKINNTKSQGFNTNII 272 Query: 290 LLIEDPETRLHPIMLSVAWHLLNLL--PLQR---------------------------IA 320 +L ++PE L P + + Q Sbjct: 273 ILFDEPEVFLSPFLQRQFMDHWLSIFNNNQDYEIINNIINIITDNNNDEINYNITPIFFV 332 Query: 321 TTNSGELLSLTPVE------HVCRL-VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNR- 372 +T+S ++ + + RL + + V L ++ + F+R Sbjct: 333 STHSAHIIPHLELNEKKNILSIQRLYYDKENNVKVASLDKYE------AKLKQFMIFDRN 386 Query: 373 -PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGI 431 LFA+ +LVEG+TE + G + E I +I+ A + L K ++ I Sbjct: 387 ILEGLFAKKIILVEGDTEIGFLPSCLNANGINIHQEHIYIIKAAPNNFPSLAKIFSKLQI 446 Query: 432 EWHVLVDGDEAGKKYAATVRSLL 454 + ++L D D K + + Sbjct: 447 KTYILTDRDCKNKDIKEQRNNKI 469 >UniRef50_Q7WY48 Pathogenesis-related protein n=5 Tax=Proteobacteria RepID=Q7WY48_PSEAE Length = 807 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 116/387 (29%), Gaps = 47/387 (12%) Query: 103 CTDGYHRIFYRLEGESAEDGSVMTLRSFL-----DKDGHPIDVEDINDQARHLVRLMPVL 157 + L E V+ R+F+ + D P+ + A L L+ V Sbjct: 182 PESLTKYLTKELSKEYTFRYYVLDERAFVGYQAREADYEPLPLGKEPGGAAILKSLVRVD 241 Query: 158 RLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQN---------LSDGQIRQG 208 LR R + G+ E +R+L + S+ ++ Sbjct: 242 FLRAQRHLDDPDAGSSDR---AESLSRRLSRFYHRNLEKRGDDHAALKALDTSEKELNFH 298 Query: 209 LSAM-VQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVI-- 265 L + L G ++ R A + ++ +I Sbjct: 299 LKEVFNDTLTRLAKLGYPGVNNPEIVIRAALDPTTVLGQDAKVHYVIPGVASAQLPDSYN 358 Query: 266 ------LLGLFATLLQAKGTLRLDKDARP---LLLIEDPETRLHPIML----SVAWHLLN 312 L+ + LL + + D R L+ IE+PE LH + LL Sbjct: 359 GLGFKNLVYMVVELLDLHEQWKAEDDKRAPLHLVFIEEPEAHLHAQIQQVFIRNVLRLLE 418 Query: 313 LLP-------LQRIATTNSGELL---SLTPVEHVCRLVRE-SSRVAAWRLGPSGLSTED- 360 Q + TT+S +L +P+ + R+ + L D Sbjct: 419 DANDHATLFHTQLVITTHSPHILYERGFSPIRYFRRVNDQLGHHTDVRNLSLFKTGASDA 478 Query: 361 --SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 + +++ F+ +LVEG E ++ + + + ++E + Sbjct: 479 PAREFLQRYLKLTHCDLFFSDAVILVEGNVERLLLPAMIELVAKRLRSSALTILEVGGAF 538 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKK 445 + +G+ V+ D D K Sbjct: 539 AHRFQELIAFVGLTTLVITDLDSVTVK 565 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 17/110 (15%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + +R + + + L+ + ++ +G N GK+S + L +L ++ FE D Sbjct: 1 MKLQAYRLQNYRRLRDVVIELDDEISIFVGANNSGKTSAVQGLYSML--RGEVKKFELFD 58 Query: 60 FWF--------------PPGDINGREHHLHIILTFRESLPGRHRVRRYRP 95 F D R + + L FR P Sbjct: 59 FSAALWAEIDAVGRTPPGDEDAPKRLPSILLDLWFRVGEDDLATAMSLLP 108 >UniRef50_Q1D0Z7 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D0Z7_MYXXD Length = 646 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 106/644 (16%), Positives = 200/644 (31%), Gaps = 118/644 (18%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES----DLYHFER 57 +L +V + FRG + + ++ NVL+G N GK++L+ A+ + S + E Sbjct: 1 MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREF 60 Query: 58 DDFWFPPGDINGREHHLHII-LTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 +F ++ ++ I L F D RI Sbjct: 61 REFQSQC-----KDDYIRIDPLVFLGLKTLLWISVEELSELYF---DPDDSFRIELHFSE 112 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG----- 171 ES ++ +D G+ + L R R + +R Sbjct: 113 ESLIGHFILN----VDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELLRENEPVAV 168 Query: 172 TVPNVPNVEVTA--RQLDFLARELSSHPQ-----NLSDGQIRQGLSAMVQLLEHYFSEQG 224 +P P R + R + Q NL R GL+ + +LL Sbjct: 169 FIPIFPGAGPNEEYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATI 228 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 + R N + +R ++ + L+ +F+ L + + ++ + Sbjct: 229 SSFTSKSDF-DRVENLKVYFR---DQEGELELASAGAGFSSLIAIFSALWRYRKSIVERR 284 Query: 285 DARPLLLIEDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLS-LTPVEHVCRL 339 LL+++PE LHP + V L L Q T+S E ++ L L Sbjct: 285 PV--FLLLDEPEAHLHPRLQGVVAMYLAELSRELGAQLFIATHSVEAINRLARRSDTSLL 342 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFN-RPSSLF--ARCWLLVEGETETWVINEL 396 V + +A L G+ ++ + + S F +R L EG ++ ++ + Sbjct: 343 VVDKKATSANILASEGVLLDE---LGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQC 399 Query: 397 ARQC--GHH--FDAEGI-KVIEFAQSG-----------LKPLVKFARRMGIEWHV--LVD 438 A G G + +G L+PL+ R G H+ ++D Sbjct: 400 AEVYFRGQPKLLARFGAWTFVPLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLD 459 Query: 439 GDEAGKKYAATVR-----------------------------------------SLLNND 457 D + R + Sbjct: 460 RDYSRSPALGPFREESGFRLLDVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSS 519 Query: 458 REAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDL- 516 RE + +L D + + + + +A+ + + + ++PD+ Sbjct: 520 RELTDIVVASLGCADRDEQLLMEATGQLMIALARTKRDDSTLVNALEQAKSEVGARPDVW 579 Query: 517 ------AIEVAMEAGRRGVDSVPTLLKKMFSR-VLWL-ARGRAD 552 A V E R +P +L+ R V+ + A G D Sbjct: 580 QRGRSRAKVVLSEIRSR----LPLMLQNCIRRDVVQMVAHGWGD 619 >UniRef50_B3Z268 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=B3Z268_BACCE Length = 569 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 102/580 (17%), Positives = 198/580 (34%), Gaps = 59/580 (10%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--------E 49 M + +EI FR I L L + VL G N GK+S L A L L+ + Sbjct: 1 MYINSIEISNFRSIGSNPPLKLDISDITVLSGINDTGKTSALLASFLGLNSCINVGKEMD 60 Query: 50 SDLYHFERDDFWFP--PGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 DL D + + L + T + V E D Sbjct: 61 KDLSKLLDGSTHRKGFSEDNSKQCIRLSLKCTKEDLEKIEDYVDENPHFEKSLKDLNDKG 120 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKD--GHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 I R + + +V+ L L + G+ D+ H + D Sbjct: 121 IDIE-REKIKQFFSDAVVLLIPPLRPELFGNFQSYVDLESWNNHAQKF---FGYDDITNF 176 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLA-RELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 + V + +E++ L+ L ++ + + + + S +V + SE+G Sbjct: 177 SIMLYRLVSKLAELEISMEYLNCLYVPGVTRSNEQILIKEEDKK-SQLVTFFKDVCSERG 235 Query: 225 AGQAR------------YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL---GL 269 + L+R ++ Q RY DI + ++ G + + G+ Sbjct: 236 KTSGKHKKFMEYFKILLPELVRIEINSTQGDERYEDIFL-IWNQNGNEKEQPLSRSGDGI 294 Query: 270 FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSG 325 + T+ L + ++ I++PE LHP++ L+ + +Q + T+S Sbjct: 295 YNTMFLVAKVLN-NFSTMNIVFIDEPEIGLHPMLQQRFIKLIRKISREFSIQWVLATHSP 353 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 +L L++ + + + + + P +L A + VE Sbjct: 354 FILQSLKNNEKLYLIKHDGN----QTNCQDIDIANKEVVFSTLGAYLPLALSATGVIFVE 409 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGD---- 440 G+TE V+ L + G + + E I +I L + K +++ + V++D D Sbjct: 410 GQTEVAVLTILLDKVGLNIEKERILIIPLGGENLFQIAAKDLKKLHEKSMVIIDSDLLKP 469 Query: 441 -EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMN 499 E G T + E E L +E+ ++ + I E Sbjct: 470 EEEGGSIKKTKLEYKDACAENNVEFLMIKEYRTLENMYP----KNILASILGIEETTLDY 525 Query: 500 LRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 + ++K + VA + + + P L+K++ Sbjct: 526 GN--FGEVPGITNKIKIGEAVANKMSKEEAECFP-LIKEI 562 >UniRef50_Q8DF42 Predicted ATP-dependent endonuclease of the OLD family n=2 Tax=Gammaproteobacteria RepID=Q8DF42_VIBVU Length = 530 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 98/292 (33%), Gaps = 44/292 (15%) Query: 190 ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 E+S + +I L + S L++ + R Sbjct: 160 QEEISGFSIDGVKSEINSELKQWGVGFDIEVSPINTDDLVKSLLKPHIEDSNLGERV--- 216 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAK-GTLRLDKDARP---LLLIEDPETRLHPIMLS 305 I G R ++ L + T KD P L+L E+PE LHP Sbjct: 217 ---DISSFGQGLQRHLIYTLIKLSAKYSAKTKSTKKDFNPDFSLILFEEPEAFLHPAQQD 273 Query: 306 VAWHLLNLL----PLQRIATTNSGELLSLT--PVEHVCRLVRESSRVAAWRLGPSGL--- 356 V + LN L Q + +T+S +S + + + RL +E+ A+++ L Sbjct: 274 VLYRSLNKLVSDEQQQVLVSTHSSVFVSKSIDSINSISRLFKETDSTTAYQITERSLKEI 333 Query: 357 ------------------------STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + +++ + + R + FAR LL EG +E + Sbjct: 334 LSNNLVAARVHGEDKSPEFDEEVRAADEAIKYFLWLDTERSNLFFARHVLLCEGPSEKVL 393 Query: 393 INELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAG 443 ++ LA + +++ L + +GI+ VL DGD Sbjct: 394 LDCLADSDWEFLREHRVYILDCVGKFNLHRFMHLLNVIGIKHSVLFDGDNDA 445 >UniRef50_UPI000197320E hypothetical protein ClM62_07685 n=1 Tax=Clostridium sp. M62/1 RepID=UPI000197320E Length = 668 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 83/478 (17%), Positives = 155/478 (32%), Gaps = 40/478 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + I ++ I+ L L+GEN GKS++L A+ +L D Sbjct: 1 MSLVEISIKNYKSISSCVFRLNGVTALLGENGTGKSNILSAVRYF---YDNLISRSESDE 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 F + + + R+++Y + Y + ++ G SAE Sbjct: 58 IFDHNNRLNNRVEIALTY-------DLGRLKQYARVN--LRNEETRYASYYEKILGISAE 108 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 D + + D D L L V R + V ++ Sbjct: 109 DMMTVRMIKIRDMPVRWSHDADTRKLIAGLFPLYFVDA-RQIDLVNW--EVLWKLVGDLV 165 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 ++ R+ + GQ++ L + LE + + +R + Sbjct: 166 KPENTVEKELRQELVNAIGEVSGQMKSRLDQIQGGLER-KNIKIEPYSRKEFAVALSKLY 224 Query: 241 QRSWRY-LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 RY D + G ++ L L A+ ++ PL+++++PE L Sbjct: 225 LSGERYQFDESSLAEFSNGTNAFNFTNLLFHILRLMAETKMK-----EPLVILDEPEISL 279 Query: 300 HPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVE-----HVCRLVRESSRVAAWRLG 352 H M+ + + ++ + T+S L+ V+ + ++ R R Sbjct: 280 HSHMIDELAEIFSQCRYDVRVLLATHSARLIRNILVQEGGENQLYQVYRRGEETKISRF- 338 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE-----TWVINELARQCGHHFDAE 407 + R + I S+ FAR LVEGETE + + EL G + Sbjct: 339 -QMFRQDSEMRERYFITDQHASAYFARALFLVEGETELEVFQSRFLKELYPLLGQAELIK 397 Query: 408 GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 G+ + + R I +L+D D+ + + R E Sbjct: 398 GMS----DDVVYRIVSPKKRGYRIPVTILMDLDKVYTYPEKLKKKYFHMCRTGENYFF 451 >UniRef50_D0TBU9 Putative uncharacterized protein (Fragment) n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBU9_9BACE Length = 444 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 71/428 (16%), Positives = 150/428 (35%), Gaps = 49/428 (11%) Query: 93 YRPLEACWTPCTDGYHRIFYR-LEGESAEDGSVMTLRSFLDKDGHPIDV------EDIND 145 + + W + R Y E E+G PI + + + Sbjct: 6 FVKVRKTWNKPNSTFARETYSPREASWIENGFGGLHTKLTKYTPTPIAINAMEDQASLEE 65 Query: 146 QARHLVRLMPVLRLRDARFMRRIRN--GTVPNVPNVEVTARQLDFLARELSSHPQNLSDG 203 + L++ + ++R + +N V + + ++ L EL+ H Q Sbjct: 66 KVNKLIQDDFIKKVR-TEYPEEFKNLIDGVRKLQERITGSEAVEKLNLELNKHFQ----- 119 Query: 204 QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYR 263 ++ L+ +Q + + + + + +R +L + +I + Sbjct: 120 EVFAELTLKIQPSKEENIKLEDAFKKNHSISVERAGTERKETFLQNGHGVIRQ------- 172 Query: 264 VILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPI----MLSVAWHLLNLLPLQRI 319 LF L K +K + ++L E+PE LHP + + L P Q + Sbjct: 173 ----ALFNFLTFLKRENEGNKK-QYIILFEEPELFLHPKIAFKLRQSLYELSKNSPYQIL 227 Query: 320 ATTNSGELLSLTPVEH--VCRLVRESSRVAAWRLGPSGLSTEDSRR--ISFHIRFNR--P 373 T+S ++ ++ + + +++G + ++ + + RFN Sbjct: 228 CATHSPLMIDISQPHSSLIRVIKNTDEETQTYQVGETLFGRDEEAKKWVQMVNRFNPHIC 287 Query: 374 SSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK-FARRMGIE 432 + +A LLVEG+TET V +L + F E I V+ P + IE Sbjct: 288 EAFYADKVLLVEGDTETIVYRDLLNRF---FPDEEIFVLNTGSKMNIPFFQEILTAFHIE 344 Query: 433 WHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQI 492 +++ D D+ KK A T+ + + + +A +++ F D + Sbjct: 345 HYIIHDSDDKEKKAAWTINTKIWENVQASNNLSKR--------YVHIHNFEDAHGITVKS 396 Query: 493 PENVPMNL 500 + P+ Sbjct: 397 DDGKPLTA 404 >UniRef50_C0BU00 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU00_9BIFI Length = 566 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 97/581 (16%), Positives = 202/581 (34%), Gaps = 62/581 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSP----ESDLYHF 55 M ++ + + GF+ ++L + L N+++G+N GKS+LL+ +T +L S + Sbjct: 1 MYIKEMRVFGFKRFSKLQVELSPGINIVVGDNDAGKSTLLEVITAVLDGQYRGTSLARNL 60 Query: 56 ERDDF-------WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 D F + + I++ E++ G + L + G Sbjct: 61 SEDLFNAENVATYIKNIRSGTQCEPPEILI---EAVFGGNDQEELLALYEG-DANSKGAK 116 Query: 109 RIFYRLEGESAEDGSVMTLRSFLDKD---GHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 L D + F+D G PI+ + + PV +A + Sbjct: 117 ESGISLRITLDTDSFANEYQEFVDSRECFGIPIEYYSCSWTTFARKSIRPVGIKFNASLI 176 Query: 166 RRIRNGTVPNVPNV-EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL--LEHYFSE 222 N V AR + + ++ + Q+R SA ++ + SE Sbjct: 177 GGGHAFAWANAKAVVSRIARNVLEPSDQIVISQAH---RQMRSNFSANEKVQQINDKISE 233 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + R + ++ SW N ++ + + + G +++ A+ L Sbjct: 234 KVESLTRKTVTLGFEADTVSSWE-----NGIVTKLENIPFSNVGDGTK-SIITAELALSK 287 Query: 283 DKDARP-LLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCRL 339 KD + ++L+E+PE L LS+ + +Q I TT+S + + ++++ L Sbjct: 288 SKDGQKDVILLEEPENHLSHTRLSMFLDDVKNRCKDIQLIVTTHSSFVANKLDLKNLILL 347 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELAR 398 + + L + SR ++ L + +LVEG+ + V+ Sbjct: 348 NGDE------STSFADLQKDTSRFFMKAPGYSTLRVLLCKASILVEGDADELVVQRAYLD 401 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN-ND 457 G +GI VI ++ AR++ + V+ D D + + R N Sbjct: 402 SYGRLPIQDGIDVISVRGVTFLRFLEIARKIEKDTVVITDNDGNVEALRSKYRDYPFINS 461 Query: 458 REAEREHLTALPALDM--------------EHFMYRQGFSDVFHRMAQIPENVPMNLRKI 503 EA H E +Y ++ ++ N Sbjct: 462 PEATNAHQVISYDESYLTEGKAKKVNYNTLESEIYESAGAEKLAKILGRSNNNRDETLDY 521 Query: 504 ISKAIHRSSKPDLAIEVAMEAGRRG-VDSVPTLLKKMFSRV 543 + K K ++A+++ + + + ++ S+V Sbjct: 522 MEK-----HKTEVALKIFDATEKITYPNYIVKAIEWAASKV 557 >UniRef50_D0GPM5 Putative uncharacterized protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPM5_9FUSO Length = 667 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 71/543 (13%), Positives = 165/543 (30%), Gaps = 83/543 (15%) Query: 1 MILERVEIVGFRGINR--------------LSLMLEQNNVLI-GENAWGKSSLLDALTLL 45 M L+ ++I FR + ++ + N LI G+N GK+++++AL L Sbjct: 1 MFLKSIKINNFRKFRKEGNKVEFTNSKNYQTNVNVASNTTLIVGKNNSGKTTIINALEKL 60 Query: 46 LSPESDLYHFERDDFWFPPGDINGREHHL-HIILTFRESLPGRHRVRRYRPLEACWTPCT 104 ++ ++ F F + + + + I L + + + Sbjct: 61 INKNINVSDFN---FHYLKEILEKGKIEIPSIEFNIIIGLEEETENKEIKNNDNLNNLLP 117 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF 164 + L+ + E + ++ I ++ ++ + +L RF Sbjct: 118 FMTLK---DLKDKEIEITIKYEIEEEEIFKEEIKKIKKIRNKESRFLKFLKILEEARYRF 174 Query: 165 MRRIRNGT------VPNVPNVEVTARQLDFLARELSSHPQNLSD---------------- 202 + T + + ++ + L + Sbjct: 175 KYYREDKTEVENFDLGKLIEIKTIKANNIEGEKSLQVAFSKIIKYRYKELIENNEEKENI 234 Query: 203 ----GQIRQGLSA---------MVQLLEHYFSEQGAGQARYRLMRR--RASNEQRSWRYL 247 +I L+ + + L FS++ + + + + Sbjct: 235 EKKFQEINNNLTEQINEKHGKILNKALNKIFSKKNLEVSLKADLSFDNLINYLLKYEYVD 294 Query: 248 DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVA 307 + + ++ G ++++ K L+ IE+PET +HP M + Sbjct: 295 EDLFIPENQFGLGYTNLMMIVANLIDYMEKYPETSFNSKINLICIEEPETYMHPQMQEMF 354 Query: 308 WHLLNL------------LPLQRIATTNSGELLSLT-----PVEHVCRLVRESSRVAAWR 350 +N + Q I +T+S +L+ + + ++ ++ Sbjct: 355 IKYINDVISELLKSHKKNINSQLIISTHSSHILNSKIQFGGSFDSINYIISLDKKIEVIP 414 Query: 351 LGPSGLS------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 L +S ED + I HI+F F+ +LVEG TE ++ + + Sbjct: 415 LKDELISFSGRREDEDFKFIKKHIKFKVSDLFFSDAVILVEGITEYNLLPYYVDK-DENL 473 Query: 405 DAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREH 464 I + K + + I + D D + S + + + Sbjct: 474 KKYYISLFNINGDYALVYKKLLKLLKIPVLIFTDLDIERIEDEKKSFSQIESLENKTTTN 533 Query: 465 LTA 467 T Sbjct: 534 PTL 536 >UniRef50_A9KJX6 ATP-dependent endonuclease of the OLD family-like protein n=16 Tax=Bacteria RepID=A9KJX6_CLOPH Length = 642 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 85/535 (15%), Positives = 192/535 (35%), Gaps = 83/535 (15%) Query: 1 MILERVEIVGFRGINRLSL-MLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ + I F+ I +L + +E+ +++G+N+ GK+ +LDA+ + S +Y + D Sbjct: 1 MQIKEISIKNFKSIRKLQMTNIEKAFIIVGKNSTGKTVILDAILAV----SGIYQIKPSD 56 Query: 60 FWFPPGDINGREHHLHIILTF---RESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 F G ++ I +++ +E L H + + D ++ Sbjct: 57 FIVSDG-------NIRIDISYVVTKEDLKSFHDRGLISKYKRYDSWYNDFCKKVPSFQPL 109 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVED-INDQARHLVRLMPVLRLRDARFMRRI--RNGTV 173 E + + SF G + D I+ HL++++P + D + R+ + Sbjct: 110 EEEDSFRLFV--SFTANKGGIVRYGDGISKHNPHLIKILPKIHYIDHKRNIEGIQRDILL 167 Query: 174 PNVPNVEVTARQLDFL---ARELSSHPQNLSDGQIRQGLS----AMVQLLEH--YFSEQG 224 + V+ R + A++ + Q + + ++ + +LLE+ Y Sbjct: 168 AQGQDAIVSLRDNVCMFDSAKKCVNCFQCIGIIEKKKPEELSIFEVAKLLEYKLYHRNLD 227 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIIN-------------------RMIDRPGGRSYRVI 265 + + RR + +S RY N + + + Sbjct: 228 SFVEKVNDCFRRNNERAQSIRYDMNFNIDEIFQMNTVVLNHERNTVGPLSTMSEGTKSIY 287 Query: 266 LLGLFATLLQAKGTLRLDKDARP-LLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATT 322 +L L + ++++ P ++++EDPE LHP + A +L L Q I +T Sbjct: 288 ILSLLEAYI-------AEQNSIPSIIMMEDPEAYLHPQLQKSASEILYRLSKKNQVIFST 340 Query: 323 NSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 +S LL + +++ + + + D I + ++ + Sbjct: 341 HSPNLLFTFNSRQIKQVILDENY------DTTVKEDTDIDEILNDLGYSANDLMNVSFVF 394 Query: 383 LVEGETETWVINELARQCGHH-FDAEG----IKVIEFAQSGLKPLVKFARRMGI-----E 432 +VEG+ ++ + L + FD G + +I + + + Sbjct: 395 IVEGKQDSSRLPLLLNKYYSEIFDENGLPKRVAIIATNSCTNIKTYANLKYINKLYLKDQ 454 Query: 433 WHVLVDGDEAGKK---------YAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 + ++ DGD K Y + R ++ ++ L E++ Sbjct: 455 FMMIRDGDGLNPKELKAQLCNYYRSRGREDIDILPRVRERNVLILKYYSFENYFL 509 >UniRef50_C6X564 Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X564_FLAB3 Length = 550 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 65/499 (13%), Positives = 159/499 (31%), Gaps = 40/499 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ ++I FR I + N+ +G+N GK++ +A+ + S E F Sbjct: 1 MKIKAIKIDNFRSIQQTEFTTTDFNIFVGQNNCGKTNFFEAVEFFFNGISKSTKLEDLKF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 E + + +TF ++ G +++ F R + Sbjct: 61 ------KRETEREIIVEITFTGAIDGVAQMQNVANRTKIENALDGSDIVTFKRSSLLPTK 114 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVR---LMPVLRLRDARFMRRIRNGTVPNVP 177 + G + D + ++ V + + + +G + + Sbjct: 115 RKMFINGTEVNPGTGFDAALNDFLPKFEYINTKQYYDSVAKYGKTTPIGIMLSGVLTAIL 174 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 +Q REL + +I+ + ++ + +Q + + Sbjct: 175 QENEQYQQFQAKFRELFEDD----NSEIKAEFDNVGNNVKIHLEKQFPDCTKVKFEVSAP 230 Query: 238 SNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 + + D I + + G R ++L + + D L I+ Sbjct: 231 VFDDLLKNFETTVDDGIETLAEEKGDGMQRALMLAIIQAYADFRKANE-DVGKSFLFFID 289 Query: 294 DPETRLHPIMLSVA---WHLLNLLPLQRIATTNSGEL-LSLTPVEHVCRLVRESSRVAAW 349 + E LHP H+L+ Q T+S + + ++ + S + Sbjct: 290 EAELHLHPTAQRNLKNVLHILSQTRDQVFINTHSSVFVADNYTSQTIFKVEKNSGETSIT 349 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 + E + + + L + +L+VEG +E ++ + ++ + + I Sbjct: 350 SVT----DLEKPYVVFELLGGSPADLLLPKNFLIVEGLSEFELLTRVIKR--FYSEKPVI 403 Query: 410 KVIEFAQ------SGLKPLVKFARRMGIEWH-----VLVDGDEAGKKYAATVRSLLNNDR 458 ++++ + + K + + +L+D + +K A + L+ + Sbjct: 404 QIVKANGDIDQAERSINAIEKLFAPLDTSIYKNRAIILIDQ-PSAQKQAGVAQFLVTYNH 462 Query: 459 EAEREHLTALPALDMEHFM 477 L D+E Sbjct: 463 LNINNQFFRLVERDIEQCY 481 >UniRef50_A2SK58 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Proteobacteria RepID=A2SK58_METPP Length = 608 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 81/558 (14%), Positives = 170/558 (30%), Gaps = 99/558 (17%) Query: 1 MILERVEIVGFRGINR-LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE---------- 49 M L+ V I FR ++ L++ +G+N GKSS+L+AL + + + Sbjct: 1 MRLKSVAIKNFRCYREEATVQLDELTTFVGKNDIGKSSVLEALEIFFNNDVVKIEAGDAN 60 Query: 50 ---SDLYHFERDDFWFPPGDIN----------------------------GREHHLHIIL 78 D +F P + + + + Sbjct: 61 VYSGDSRLSITCEFSDLPASLTLDAGAVTTLADEHLLTADGTLKIQKIYDCKTKTPSVEV 120 Query: 79 TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPI 138 P V L+ + +L+G ++ + L + Sbjct: 121 FLVAHHPTADGVAGLLDLKEKELQALIKAKGLAVQLKGNPGMRKALWDAEADLKIAEVTL 180 Query: 139 DV----EDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN------VPNVEVTARQLDF 188 + ED L +P+ L + R +G V + ++D Sbjct: 181 ALTKPKEDSKRIWEQLESHLPMFALFQSDRSSRDSDGEVQTPMKAAVAAAIAEVQDEIDL 240 Query: 189 LARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLD 248 + + + + +I Q ++ ++ +++ Q + + D Sbjct: 241 IQKRVKEKAE-----EIAQSTHKALKAIDPNLAKELTPQFTPPTTAKWTGLFSVNMDTDD 295 Query: 249 IINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP---LLLIEDPETRLHPIMLS 305 I +++ G R++L+ F +A R+ + IE+PET HP Sbjct: 296 GI--PLNKRGSGVRRLVLVSFF----KAAAERRMASGGNTRSIIYAIEEPETAQHPNNQK 349 Query: 306 VAWHLLNLLPL----QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDS 361 + L Q + TT+S + P + + + R+++ G + Sbjct: 350 ILIESFKALAGESGYQVLLTTHSPGFAAELPTDSIRFVTRDANDNPKIEAGVDVFAE--- 406 Query: 362 RRISFHIRFNRPSSLFAR---CWLL-VEGETETWVINELARQCGH------HFDAEG-IK 410 + + A LL VEG T+ L+R +G + Sbjct: 407 --------VAQALGVVADSKVKVLLCVEGPTDVTAFKCLSRALHLADATIPDLGNDGRVA 458 Query: 411 VIEFAQSGLKPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTAL 468 I S L+ V + + +G + D D A + +L + Sbjct: 459 FIVLGGSTLQHWVAGHYLKALGRPEVHIYDSDVATYGASVAAVNL-----RTDGSWALQT 513 Query: 469 PALDMEHFMYRQGFSDVF 486 ++E++++ + F Sbjct: 514 LKYEIENYLHADAIQEAF 531 >UniRef50_Q4JUU2 Putative uncharacterized protein n=2 Tax=Corynebacterium jeikeium RepID=Q4JUU2_CORJK Length = 543 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 73/465 (15%), Positives = 144/465 (30%), Gaps = 47/465 (10%) Query: 2 ILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLS-------PESDLY 53 ++ +V I F+G+ NV++G N GKS+LL+A+ L + P L Sbjct: 1 MISKVRIRNFKGLQNYEATFSPQYNVIVGANGAGKSTLLEAIGLAIGGRINGQWPSDALS 60 Query: 54 HF------ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEA--------- 98 + ++ F + I + S R + + Sbjct: 61 PYWFHTQTTKEFFDAYSAGQRPEVPKIVIEVILDNSSKNPDLARLQGKMNSKNANETGLA 120 Query: 99 CWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 D Y + F+ E+G L + + + R L L Sbjct: 121 FEVSLNDDYTKEFWDYMAAWEENGVSAKLFPTEYFETYWHSFGSPDRLTRKPRGLNFALI 180 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + + R + + + L+ L S + L ++ + +++ Sbjct: 181 GPQSNSLNRGVDRYTRQLLEDHIPDEVAANLSVTLRSA----FTSSTQTALESVNEKIKN 236 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 + + S + +S I + G + + + K Sbjct: 237 --DPAKPLKQLGIQIDPAVSGQWQSGITPAINSLPFSHAGFGEQAIAKVEVSLLKSATKA 294 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHV 336 L+LIE+PE L L + L Q I TT+S +L+ ++ + Sbjct: 295 D---------LILIEEPENHLSHTKLRQLLDRIKALGADQQIIVTTHSSFVLNRLGLDGL 345 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 + R S L + D + F+ + A +LVEG ++ ++ E Sbjct: 346 MLVERGVGA------RLSDLQSSDIKFFQKLPNFDTLRLILADHVVLVEGISDLLIVEEA 399 Query: 397 ARQ-CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 + G A G+ +I + + A + + D D Sbjct: 400 FERNYGMGSSALGVDIISVEGVKHERWFRLAALLDKRVIGIRDND 444 >UniRef50_D2LK58 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK58_RHOVA Length = 543 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 81/470 (17%), Positives = 152/470 (32%), Gaps = 61/470 (12%) Query: 1 MILERVEIVGFRGINR-LSLMLEQN-NVLIGENAWGKSSLLDALTLL------------- 45 M +E+V+I F+ + +Q N+++G N GKS+LL+A+ L Sbjct: 1 MYIEKVKIKNFKCFEGWFEVDFDQGVNIIVGNNEAGKSTLLEAIHLCLTGMLNGKYLRNE 60 Query: 46 LSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTD 105 LSP + ER + + I L +R E D Sbjct: 61 LSPYLFNRNIERAYLDSLATKAPLQPPEIQIELFLDGEDDALEELRGNGNSEK-----ND 115 Query: 106 GYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 + + +E + DG+ L + ++IN ++ R Sbjct: 116 KARGLLFSIEFDKKYDGAYTEL----------LKGKEINSIPLEFYQVQWSEFSRQPAMA 165 Query: 166 RR--IRNGTVPNVPNVEVTARQ--LDFLARELSSHPQNLSDGQIRQGLSA------MVQL 215 R I++ + + + + + RE + ++ Q + L V Sbjct: 166 RTIPIKSALIDSTSTRVQSGSDMYISRIVREFLDDKERVAISQAHRKLKDAFKADGNVGA 225 Query: 216 LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ 275 + +E + + S+ L + ++ L Sbjct: 226 INERLAEAAKISRKKVSISVDMSSHNAWESSLMTYIEDVPFHYIGKGEQCIVKTRLALSS 285 Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPV 333 K + +LLIE+PE L L+ ++ Q I TT+S + + + Sbjct: 286 KKNSEA------TVLLIEEPENHLSHSKLNQLISDISTDNSGKQVIITTHSSFVANKLGL 339 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 +H+ L+RE+ L S + + + ++ S +LVEG+ + V+ Sbjct: 340 DHLI-LLREAKVTRIKDLDASDFFHKLPGYDTLRLVLSQKS-------ILVEGDADELVV 391 Query: 394 -NELARQCG--HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 G D E I VI ++ A + I V D D Sbjct: 392 QRAYMDANGGKLPIDDE-IDVISV-GLSFLRFLELATALKIPVVVATDND 439 >UniRef50_C7VQS3 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VQS3_ENTFA Length = 620 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 63/438 (14%), Positives = 140/438 (31%), Gaps = 53/438 (12%) Query: 123 SVMTLRSF---LDKDGHPIDVEDINDQ----ARHLVRLMPVLRLRDA--RFMRRIRNGTV 173 L + D + + + + L+ + + R+A + +G Sbjct: 106 KYFELHRYSREFDIKLNKVTSNTSEEIKFSTIKKLINIKTIKANREASNKINDSSLSGLS 165 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ---GAGQARY 230 N +++ + DF + + + + S + G + F G+G Sbjct: 166 QKYYNTQISEEEFDFSELQKAINEADNSLSKAYNGTGDNSGIFTEIFKSVERFGSGTTET 225 Query: 231 RLM-------RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL--GLFATLLQAKGTLR 281 L N + D G +I + + ++ + G Sbjct: 226 TLTIQSSISEVDLLKNNTTLYYKSDDCQLPESYNGLGYLNLIGMIFEIETSIAEFCGKQN 285 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELLSLT 331 +L IE+PE HP + + + L LQ + TT+S ++S Sbjct: 286 ESPADINILFIEEPEAHTHPQLQYIFIKNIKELLGERKIKNKIDLQTVITTHSSHIVSEC 345 Query: 332 PVEHVCRLVRESSR--VAAWRLGPSGLSTED--SRRISFHIRFNRPSSLFARCWLLVEGE 387 + V L R + ++ +++ + ++ NR F + +EG+ Sbjct: 346 DFDDVRYLKRTENSLISKNFQELKERYASDSHAFNFVKQYLSLNRSELFFTDKAIFIEGD 405 Query: 388 TETWVINELARQCG---------HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVD 438 TE ++ + ++ ++ I +IE A + +GI+ ++ D Sbjct: 406 TERILLPTMMKKIDSTHITDKKYIPLLSQNISIIE-AGAYAHIFKPLIDFLGIKVLIITD 464 Query: 439 GD---EAGKKYAATVRSLLNNDREAEREHLTALPALDME-HFMYRQGFSDVFHRMAQIPE 494 D + G K A+ + +++ L LP D + + + + + ++ Sbjct: 465 IDGVEKNGGKSCASTEAKYTSNQSL--RKLFELPNDDTQFEVLINKSYEN--KTISDQMY 520 Query: 495 NVPMNLRKIISKAIHRSS 512 KA H S Sbjct: 521 IAYQTEITTGDKAYHPRS 538 >UniRef50_UPI0001C33FD4 hypothetical protein CATC2_18455 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33FD4 Length = 776 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 80/553 (14%), Positives = 159/553 (28%), Gaps = 111/553 (20%) Query: 1 MILERVEIVGFRGINRLS----------------------LMLEQNNVLIGENAWGKSSL 38 M LE + I +R ++ ++IG+N GK+++ Sbjct: 1 MHLEFLTIKNYRKFRSTDNKVCFVKPEVIDMTTEGEQSKSVIAPSTTLIIGKNNAGKTTV 60 Query: 39 LDALTLLLSPESDL-------------------YHFERD-DFWFPPGDINGREHHLHIIL 78 ++AL +L E L Y+ ++D F + + Sbjct: 61 INALKMLCGNEQPLASDFNLSYLNELFSLYKRSYNIDQDTKFEQLETPTLEFTLAIKVDF 120 Query: 79 -------------TFRESLPGRHRVRR--YRPLEACWTPCTDGYHRIF-YRLEGESAEDG 122 + E G R + + + T + RIF + + D Sbjct: 121 NDNDLMTNLSPFISISEGESGTSVSIRIVVKIVYSEETAFKEEVKRIFNLKNSEGNTLDH 180 Query: 123 SVMTLRSFLDKDGHPIDVEDINDQAR-----------HLVRLMPVLRLRDARFMRRIRNG 171 +L ++ + + L ++ +++ + R ++ G Sbjct: 181 KQQFEMFYLMLSKDTNCFKNEGNLYQTNFIDILGEPAEKFSLKKLINIKEIKANRHLKEG 240 Query: 172 TVPNVPNVEVTARQLDFL-ARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + +V N V+ + + +R +L + QI + A + E Sbjct: 241 VLSDVFNKIVSFQFTNDTKSRTGLESSIHLINQQISLSVGAKSTDISQVLCEIEHSNKVD 300 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL--------LQAKGTLRL 282 + S + + ID LG L + Sbjct: 301 LNLSGNVSYDAIMKGLIKY--NFIDGEDYIPEDQFGLGYINLLNIIGEIIHFVDSYENKS 358 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLL------------------NLLPLQRIATTNS 324 LL IE+PE +HP M + L Q TT+S Sbjct: 359 HFSKVNLLFIEEPEAFMHPHMQEFFIKRIDNAVKKALEIANNSSVIKKTLQCQIAITTHS 418 Query: 325 GELL-----SLTPVEHVCRLVRESSRVAAWRLGPSGL-------STEDSRRISFHIRFNR 372 ++ S ++ L A L + + E + I HI++ Sbjct: 419 SHIVNSKIHSSNTFNNLNYLTSIKKCTKAINLTDECVVSSEDNDANEKLKFIKKHIKYKV 478 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 F+ + VEG TE +++ + I V + K A+++ + Sbjct: 479 SELFFSDAIIFVEGITEETLLHYYLEKHPI-LSNYYISVFNINGAHGKLYFPLAKQLCVP 537 Query: 433 WHVLVDGDEAGKK 445 ++ D D +K Sbjct: 538 SLIVTDIDIKREK 550 >UniRef50_B2SJS5 Putative uncharacterized protein n=2 Tax=Xanthomonadaceae RepID=B2SJS5_XANOP Length = 535 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 80/460 (17%), Positives = 148/460 (32%), Gaps = 42/460 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLL----LSPESDLYHF 55 M +ER+ I F+ L L L + N+++G+N GKS+LL+A+ + L + Y Sbjct: 10 MPIERIVIDNFKSFRHLDLPLNSHMNLVVGDNEVGKSTLLEAIHAVVTGQLHGRNLAYEL 69 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTD-GYHRIFYRL 114 F P + + + + L + G+ RL Sbjct: 70 TPYLFHQPTVNEYLAALQAGTPAS-PPRIAIEAYLGSDAALASLRGTNNSLGFDTAGIRL 128 Query: 115 EGESAEDGSVMTLRSFLDKDG-----------HPIDVEDINDQARHLVRLMPVLRLRDAR 163 E +D G AR + + Sbjct: 129 LVELNDDYREEFNAYLQQHQGVVSLPVEYYTVRWYSFAHNGVTARS-IPFDSTIIDTHGI 187 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 + + + +T Q L+ Q+ S+ ++A L EH Sbjct: 188 KTLSGADRYIAGIIEQALTPAQRVSLSLSFRRMRQSFSEEADVAAINA--YLTEHTGDIS 245 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 R++ E YLD + G +S + L + A Sbjct: 246 HRTLTVGVDTSPRSTWETSLSPYLDELPFTQAGKGEQSAVKMKLAMHAA----------- 294 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVR 341 A +LLIE+PE L ++ + L Q + T+S +L+ V++V Sbjct: 295 -GAAHVLLIEEPENHLSFSSMTQLIDKIAALSSTQQVVIATHSSFVLNKLGVDNVILFSA 353 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELARQC 400 + ++ L ++ + + A+ +LVEG ++ ++ Sbjct: 354 QG------QMKLDQLPSDTHDYFMKLPGHDTLRLILAKQAILVEGPSDELIVQRAYRDHH 407 Query: 401 GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 G A G+ +I K ++ A R+ I+ V+ D D Sbjct: 408 GVAPLARGVDIISVKSLAFKRFLQIAERLHIQAKVITDND 447 >UniRef50_A6LLZ6 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LLZ6_THEM4 Length = 616 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 81/555 (14%), Positives = 190/555 (34%), Gaps = 100/555 (18%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + +V + FR R + +E V IG N GKS++L+A+ + ++ + E +D Sbjct: 1 MKIAKVILENFRAFYGRNEIPIEDFTVFIGRNDQGKSTILEAIDIFINDGKGVTKIEEND 60 Query: 60 FWFPPGDINGR-----------EHHLHIILTFRESLPGRHRVRR--YRPLEACWTPCTDG 106 + ++ I T +L + + + + + + Sbjct: 61 LNIKAKNEGNEIFKIGVCFKDLPENIVIDATNTTTLQNEYLLSKEGFLEIYKVFKNGKLQ 120 Query: 107 YHRIFYRLEGESAEDG-------SVMTLRSFLDKDG------------------------ 135 + R + + + L++F+ + G Sbjct: 121 NKETYIRCMHPANDSFLEGLLKKKITELQNFVREKGPDCLDLRKSAELRKCIRDYYKSKD 180 Query: 136 HPIDVEDINDQARH---------LVRLMPVLRLRDARFMRRIRNGT--------VPNVPN 178 + +++I+ + L + +P+ L + ++ V + Sbjct: 181 GDLVLKEIDLKINEEGMKDIWLQLEKCLPIFSLFHSDRPNTEQDSEIQDPLKTKVDEIFK 240 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 E +L+ +A+E+ + +++ + + Q E + G+ R++ + + Sbjct: 241 REDIQNKLEEIAKEIDEELKKIANATVEKFRELSQQDTEIKPNIPEVGKLRWKDVYKGIG 300 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + + +++ G R++L+ F + K + + + IE+PET Sbjct: 301 YNTDN-------DIPLNKRGSGLRRLVLVSSFLA--EIKAQNESEDNLNVIYAIEEPETG 351 Query: 299 LHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 LHP M + L L Q + TT+S L+ + V + +E+ + + L Sbjct: 352 LHPEMQKTLINNLIKLSKNGKHQILITTHSPALIRFFETDSVRYVEQENGKAKVY-LFDE 410 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-------NELARQCGHHFDAE 407 + + + + P+ + + VEG + + EL E Sbjct: 411 NIGGKIVKELGL-----LPNI--GKVVICVEGTNDKNFLMNINQNIPELMEIIDLKEKIE 463 Query: 408 G--IKVIEFAQSGLKPLVKFARRMG---IEWHVLVDGDEAGKKYAATVRSLLNNDREAER 462 I +I S L + +E+H L D D +KY V + ++ + Sbjct: 464 SGLISIIPMQGSNLNEWIDCYALKNTNVVEFH-LYDRD-CDEKYKKAVEEV---NQRKDG 518 Query: 463 EHLTALPALDMEHFM 477 + ++E+++ Sbjct: 519 SYGVLTTKREIENYI 533 >UniRef50_UPI0001C41A1B RecF/RecN/SMC N terminal domain-containing protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A1B Length = 566 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 90/578 (15%), Positives = 193/578 (33%), Gaps = 71/578 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYH------ 54 +L ++I FR + + NV+IGEN GK+SL+D+L +L + + Sbjct: 1 MLINIKIKNFRSLKDFEMNFNPGLNVIIGENDAGKTSLIDSLKILFGLKKIDINDYNEVG 60 Query: 55 ------FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 + +F + + ++ R ++ Sbjct: 61 CPITIALDESNFHYCLESRIVEDTVVNTFYLKPTEDKINEMKTRLNGMDELKEAEARKML 120 Query: 109 RIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR-------D 161 + + + S S+M + ++ + ++ + P+ L D Sbjct: 121 KEYCSIFDISYRSNSIME-----NLKSKILESMESDEYTKVKSFSYPISFLGSREFENID 175 Query: 162 ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSH--PQNLSDGQIRQGLSAMVQLLEHY 219 + F + N+ + + L+ + + LS+ Q + L+A ++ Sbjct: 176 SFFENTFFKELKEEIWNIHIGDKTLNQHIDDYIEEFKNEQLSN-QDAEELNAQLKEFMPD 234 Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 F E + E + MI++ G + R + +F Sbjct: 235 FKEINPIVNPSAKLSLDVDVEILNSS---GQRIMIEKMGDGTNRRTTMAIF--------- 282 Query: 280 LRLDKDARPLL-LIEDPETRLHPIMLSVAWHLL---NLLPLQRIATTNSGELLSLTPVEH 335 + KD + L+ + ++ ET LH LL Q I TT+S L++ + Sbjct: 283 -KHKKDKKDLVYVFDEIETHLHIKAQLDILKLLKDLTKENKQIIITTHSPFLINQVNLNE 341 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISF-HIRFNRPSSLFARCWLLVEGETETWVIN 394 + L+ + S L++ + +++ ++ N F L+VEGE+E I Sbjct: 342 I-HLMSIDKETGS---KVSTLNSSEESQVALSNLGINNIDLFFTNKLLIVEGESEQNFIP 397 Query: 395 ELARQC-GHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 + + G+ IK+++ P ++ ++ + + V D + Sbjct: 398 IMYEKIYGYPISQNFIKIVKADGIRDIPNFIRVIKKSFSKTDIFVLMDNDADELTEERIE 457 Query: 453 LLNNDREAEREHLTALPALDMEHFM----YRQGFSDVFHRMAQIPENVPM---------- 498 + R+++ + ++ E RQ S M Sbjct: 458 KMVEGDLIHRDNIFEIGDVEFEDTFSDDILRQALSQYMSDTLGYAVEASMRDIQNARHSD 517 Query: 499 NLRKIISKAIHRSS-----KPDLAIEVAMEAGRRGVDS 531 K++ +A +R + KP A +AM A + +D Sbjct: 518 KFSKVLGEAFNRRTYKNFKKPLFAQYLAMFAEKEDIDE 555 >UniRef50_UPI0001B4CEC2 SMC domain-containing protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CEC2 Length = 536 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 183/568 (32%), Gaps = 59/568 (10%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD-- 58 +L ++ I +R L + N+L+G+N GKS++L+A+ L L+ + +D Sbjct: 1 MLSKIVIHNYRTFREFELDFDPEMNILVGDNDAGKSTILEAIELGLTGKLRGRPLYQDLS 60 Query: 59 --DFWFPPGDI---------NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 F + I L F +S P +R L P Sbjct: 61 PYLFHQDAVSEWIADLREGRAVPPPEIIIDL-FLDSTPEAATLRGNNNLLKADEPGVRIR 119 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR--FM 165 + E E E + + + +D + + L DA + Sbjct: 120 VALNPDYEAEYKEFIKKPDEVRLIPTEYYKVDWLAFDGNGVTFRSIPASASLIDAANIHL 179 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 + + + ++ + + A + L R S + + + ++V++ Sbjct: 180 QSGVDYYMKHIIDSRLKADERVKLTRAYRSLRETFAQDE------SIVKINGDLRGTSND 233 Query: 226 GQARYRLMRRRASNEQRSWR----YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 R + S + +LD + G +S ILL L + A Sbjct: 234 VSDRELTLNIDVSQKSSWESGIVPHLDDLPFQFVGKGEQSTLKILLALNKKVDDAH---- 289 Query: 282 LDKDARPLLLIEDPETRLH-PIMLSVAWHLLNLL-PLQRIATTNSGELLSLTPVEHVCRL 339 ++L+E+PE L P + + + Q TT+S +L+ ++ + L Sbjct: 290 -------IVLVEEPENHLSFPNLGKLVKKISKKCEDQQVFITTHSSFVLNKLGLDKLVLL 342 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 +R+ ST++ + R + A+ +LVEG ++ V+ Sbjct: 343 SPGGG----FRIDRLPTSTQEYFKKLSGYDTLR--LVLAKRSILVEGPSDELVVQRAYMD 396 Query: 400 C--GHHFDAEGIKVIEFAQSGLKPLVKFARRM-GIEWHVLVDGDEAGKKYAATVRSLLNN 456 G GI VI K + A + G V+ D D K A VR N Sbjct: 397 THDGTLPAENGIDVINVRGLSFKRFLDIAMLLPGNRVAVITDND---GKEARDVRQRYAN 453 Query: 457 DREAEREHLTALPALDME-HFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPD 515 ++T D M Q F + + + + K D Sbjct: 454 Y--TASANITVHVGKDANFKTMEPQLFKANGRVTMNAVLGQNFTTDQDLLDHMKKH-KTD 510 Query: 516 LAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 A+ + ++P +K+ V Sbjct: 511 CALAIFESDQLI---NMPEYIKEAVDAV 535 >UniRef50_Q2SV15 Putative uncharacterized protein n=1 Tax=Burkholderia thailandensis E264 RepID=Q2SV15_BURTA Length = 784 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 22/219 (10%) Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIML----SVAWHLLNLLP---------LQRIATT 322 +K + + L+L+E+PE LH + A+ +L P Q I +T Sbjct: 402 SKSSEAASIEPLHLVLVEEPEAHLHAQVQQVFIKKAYEVLRRRPELGESDALRTQLIVST 461 Query: 323 NSGELLSLTPVEHVCRLVRESSRVAA-----WRLGPSGL---STEDSRRISFHIRFNRPS 374 +S + TP + R + + A + S + TE R ++ ++R Sbjct: 462 HSSHVAHETPFASLRYFRRLPAGMVAKVPVSTVVNLSQVFGEGTETERFVTRYLRAQHAD 521 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWH 434 FA +LVEG E +I R + ++E S L +G+ Sbjct: 522 LFFADAAILVEGPAERMLIPNFIRAHYKVLHQSYVTLLEIGGSHAHRLRPLIDHLGLLTL 581 Query: 435 VLVDGDEAGKKYAATVRSLLNNDREAEREHL-TALPALD 472 ++ D D ++V+ L ++ L T +PALD Sbjct: 582 IVTDLDSLTATGGSSVQPALGAGQKTNNATLKTWVPALD 620 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M +E VEI FR + + L + + +G N GK+S + AL L+P F+ D Sbjct: 1 MHIEFVEIANFRKLLSARVDLSLKTTLFVGANNSGKTSAMLALRRFLTPRRC--PFDIHD 58 Query: 60 F---WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACW-TPCTDGYHRIF 111 F P G L L + + P W D HR+ Sbjct: 59 FTLCHLPALVDIGETW-LQANLEGVATDLTLDPWVQALPALDLWLQVKEDEVHRVR 113 >UniRef50_B1R423 Putative uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R423_CLOPE Length = 675 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 72/546 (13%), Positives = 161/546 (29%), Gaps = 90/546 (16%) Query: 1 MILERVEIVGFRGINRL-SLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + + + ++ + +++ LIG+N GKS+++DA+ + Sbjct: 1 MNIVGIRVKNYKSFLDSGKIPVDKKLFSLIGQNNTGKSAIMDAVQCVFPSSKKSVSVL-- 58 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRY-----------RPLEACWTPCTDGY 107 DF D + I + F + Y R ++A Sbjct: 59 DFHKGTDD------EISIEIWFDGVNETYLEEKIYGDKILKQLEKVRNIQAGLGENPTQS 112 Query: 108 HRIFYRLEGE-----SAEDGSVMTLRS----------------------FLDKDGHPIDV 140 E E +E+ T + F + I Sbjct: 113 KIKKLDAEKEKIEKIRSENYDAYTAKYNIKDEKFYVRLVSKKGKNVYKKFYIDNEIEITE 172 Query: 141 EDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ-- 198 D+ L +++P +R + + ++ + + ++ + Sbjct: 173 GDLKALLPQL-KVIPAIRDPKNESTAGSNSYLKELIQMLDDEIQTSIKIEGNNITYKELN 231 Query: 199 NLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM----- 253 + + + ++ + + F Q G Y ++ N + Y I + Sbjct: 232 KVIAEETKARCKSIGESVTQ-FYNQAIGTEEYIVIIDSDVNISKGTTYTTKIRDINTGIE 290 Query: 254 --IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL 311 I G +I+L + T ++ K++ +LLIE+PE LHP + L Sbjct: 291 SDILNCGTGYQSMIILSILETYVKISQ-----KNSDYILLIEEPEVYLHPKLQRKMIDTL 345 Query: 312 NLL--PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIR 369 + Q I T++S +S + + + + + + P + E + Sbjct: 346 VTISNKNQIIFTSHSPITVSKLSKDQIRLVKKVNGVAKVENIIPKIVINE--------LG 397 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK----- 424 L + + VEG+ + +I L + + + I +I+ Sbjct: 398 IKSDDILTNKGIIFVEGKDDKNIIELLLNKIEYGISDK-INIIDAGNCENLKFYANAEIL 456 Query: 425 FARRMGIEWHVLVDGDEAGKKYAA----------TVRSLLNNDREAEREHLTALPALDME 474 I ++ D D L + + + L +E Sbjct: 457 INNNFDIPTLIIRDTDTKEPSKRKEELIKEITSHRNNGLPSEVERKINKSIVILERYSLE 516 Query: 475 HFMYRQ 480 + + Sbjct: 517 GYFIDE 522 >UniRef50_UPI0001BC8A63 hypothetical protein PsyrptA_24648 n=2 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC8A63 Length = 572 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 90/472 (19%), Positives = 157/472 (33%), Gaps = 69/472 (14%) Query: 1 MILERVEIVGFRGINRLSLML--EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M +E++ + FRGI L L + LIG K+++LDA+ LSP F Sbjct: 1 MRVEQLTVKNFRGIKHLEWKLMGQSICCLIGVGDSAKTTVLDAVEAALSP--RWMTFNEA 58 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF + + + +T E R+ +P + Sbjct: 59 DFHHANTAED-----IEVEVTIGELSRALLSDGRFGLYLRGLSPKGELNDEP-------E 106 Query: 119 AEDGSVMTLRSFLDKDGHPI-----DVEDIND-QARHLVRLMPVLRLR--DARFMRRIRN 170 D V+T+R +D P+ D I + + ++RL +AR + + Sbjct: 107 DADTPVLTVRLSVDATMEPVWSLVCDRYPIPRVLSNRDRAMFCLVRLAGDEARHLTWAQG 166 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 + + Q+ A + NL S ++ Q ++ + QA Sbjct: 167 SVLSKMTEANDETSQMLAHAYRSARQSANLGSIPELAQAAASAETAARSLGAYIN--QAY 224 Query: 230 YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPL 289 + S L + + G + R+ L + R + Sbjct: 225 CPDLELGRGGFNSSSIALHDGSVPLRLAGLGTRRLATLAV----------QRSAISEGAI 274 Query: 290 LLIEDPETRLHPIMLSVAWHLLNL----------LPLQRIATTNSGELLSLTPVEHVCRL 339 +L+++ E L P + A L Q + TT+S +L+ P + + Sbjct: 275 VLVDELEQGLEPHRVLGAMAQLKKWQQEAEKAHLAKGQILMTTHSDVVLAELPPPSLFIV 334 Query: 340 VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNR-----PSSLFARCWLLVEGETETWVIN 394 R VA D + + +R P +LFAR LL EG TE ++ Sbjct: 335 SRSPEAVA------------DIKHAQANGDISRVIKGAPRALFARKILLCEGATELGMML 382 Query: 395 ELARQC-----GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 L + G + G +++ S PL R +G E + D D Sbjct: 383 GLRERYPDRHDGVPIEQLGAAIVDGGGSAGPPLALALRALGYEVGLFRDSDR 434 >UniRef50_B7BHI3 Putative uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BHI3_9PORP Length = 331 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 25/176 (14%) Query: 289 LLLIEDPETRLHPIMLSVAWHLL----------------NLLPLQRIATTNSGELLSLTP 332 L+ IE+PE LH V L Q + +T+S +++ Sbjct: 155 LVFIEEPEAHLHAQAQQVFIRKAMDALTNDSTNEILRNNKDLTTQLVVSTHSNHIVNEVD 214 Query: 333 VEHVCRLVRESSRVAAWRLG-----PSGLSTED--SRRISFHIRFNRPSSLFARCWLLVE 385 + H+ R + ++ R ++ +IR FA +LVE Sbjct: 215 MCHLRYFKRIIDDNIKIPVSEVVNLSRTFGDDNDTKRFVTRYIRLTHCDIFFADAIILVE 274 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 G E ++ + R + D I VIE S +++GI ++ D D Sbjct: 275 GAAERILMPKFIR--DENMDNFYISVIEINGSHAHRFDSLTQKLGIPTLIITDIDA 328 >UniRef50_C7P8D3 SMC domain protein n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P8D3_METFA Length = 642 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 69/465 (14%), Positives = 155/465 (33%), Gaps = 54/465 (11%) Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVR---LMPVLR-LRDARFMRRIR 169 +E +D + LR F+ DG I +I + + + + +++ F +I Sbjct: 195 IEVNKLKDKVLEELRKFVYNDGRIIVEGNIPKYHVYFLDGKHFEDISKFIKEMFFKEKIE 254 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 N + + + +E S + + ++++G +V L+ Y + + Sbjct: 255 NIWKEKISEEKTIEEFILEKLKEYSENIER----ELKEG--DVVNKLKKYLPKLEDIKIE 308 Query: 230 YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPL 289 + + + + + I + G + R I + LL+ K + + ++ L Sbjct: 309 PIFTSDKINADIKPKLLENCGEIPIHKKGDGTKRRITM----ALLECKKSKQEEQP--TL 362 Query: 290 LLIEDPETRLHPIMLSVAWHLLNL---LPLQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 + ++P+T LH ++ Q I TT+S +++ + L ++ Sbjct: 363 YVFDEPDTHLHVRAQRDLLRVIEDFYKSGNQVIITTHSPFIMNSVEARKIRLLSLKNGET 422 Query: 347 AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFD 405 ++ + + + + FAR L+VEGETE I ++ + G Sbjct: 423 KIKKISHDKVVEKILKDLG----IENIYLFFARKILIVEGETEEVFIPKIYEKFHGTALR 478 Query: 406 AEGIKVIEFAQSGLKP-LVKFARRMGIE--WHVLVDGDEA-------GKKYAATVRSLLN 455 ++ IK+I P + +LVD D K Sbjct: 479 SDLIKLINRKSVDNIPKFAEVLHEFIKPEDIIILVDNDIDENAEEIINKLNIPKENIFKI 538 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP---------ENVPMNLRKIISK 506 +E E + + ++ ++ + + SK Sbjct: 539 GYKEFEDAFEPEVIYESWKQYVIKKKGEKLNKEWLTTKWTIENISKIREECIKNSMKFSK 598 Query: 507 AIH--------RSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 + + +KP LA +A + +P L+ + R+ Sbjct: 599 KLKSLNAESGAKMTKPKLAEALAEYCEW---EHLPKELQNLLERL 640 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 +++++ + FR + + + + VL+GEN GK+S++DAL ++ + E DDF Sbjct: 1 MIKKLMVENFRSLKNVEISFEDDITVLVGENDSGKTSIVDALKIMFDNK----TVEEDDF 56 Query: 61 WFPPGDI 67 ++ I Sbjct: 57 YYGTNKI 63 >UniRef50_Q1RFS3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1RFS3_ECOUT Length = 715 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 123/378 (32%), Gaps = 55/378 (14%) Query: 95 PLEACWTPCTDGYHRIFYRLEGESAEDGSVMT-LRSFLDKDGHPIDVEDINDQARHLVRL 153 PL+ R F E+ + T LR + K +PI+ +++D + Sbjct: 182 PLKDLIRIDEINAQRGFGSPSAADKENSKLNTQLRDYYSKHLNPIESPELSD-----IEA 236 Query: 154 MPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMV 213 + +R F R++N + VE + ++D +++ + Sbjct: 237 LQAIRDAQDTFDERLKNCFSQAIKEVEGL-------------NYPGVTDPKLK-----IS 278 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL 273 +E +Y L ++ R + N + + S L+G + Sbjct: 279 TKIEPIDGLNHDSAVQYELTNALSNVSLDYLRLPESYNGLGYQN-LISIAFRLMGFRDSW 337 Query: 274 LQA-----KGTLRLDKDARP----LLLIEDPETRLHPIMLSVAWH-------------LL 311 ++ K +++ P L+LIE+PE LH + + Sbjct: 338 MKVGKATNKKLADDNQEDFPAPLHLVLIEEPEAHLHAQVQQIFIRKAYDILRNHNNLGDK 397 Query: 312 NLLPLQRIATTNSGELLSLTPVEHVCRLVRESS--------RVAAWRLGPSGLSTEDSRR 363 L Q I +T+S + + R + G++ + + Sbjct: 398 EELHTQLIISTHSSHIAHECKFSSLRYFRRIPACKEHEIPVSTVINLSNVFGVNDDTEKF 457 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 + +++ FA +LVEG E ++ L R+ + I ++E S L Sbjct: 458 VIRYLKATHCDLFFADAVILVEGPAERILVPHLIRRHYPFLNQSYITLLEIGGSHAHRLK 517 Query: 424 KFARRMGIEWHVLVDGDE 441 + + ++ D D Sbjct: 518 NLIVSLNLLTLIITDLDP 535 >UniRef50_UPI0001873D90 hypothetical protein PSPTOT1_4227 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873D90 Length = 724 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 68/466 (14%), Positives = 137/466 (29%), Gaps = 67/466 (14%) Query: 53 YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC------TDG 106 + E +D D + + I+ T + L + PL Sbjct: 86 FRLEPEDMEDLYVDYRKQRERVEILKTEIQRLAAEGEDPPHLPLWPQSLHDYLNRRLGKM 145 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR------ 160 + +YRL+ +D T + + N +L+R+ + R Sbjct: 146 FKVRWYRLDPAQLQDPDPRTRSANRQSLSATSVALERNPLI-NLIRVHEINAQRGFGDSA 204 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQ---------LDFL-ARELSSHPQNLSDGQIRQGLS 210 D ++G + + + L A Q D ++ Sbjct: 205 DEGHDDGKQSGGRKLSEQLRAYYNRHLDPGDSPDISDLGALRAIEAAQVAFDTRLSTSFE 264 Query: 211 AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY-LDIINRMIDRPGGRSYRV----- 264 ++ + + + R ++ L ++ + PG R+ Sbjct: 265 PALKEVAGLGYPNNSDPSIRVATRLAPTDGMNHEAAVLFELDSIGGAPGAPPLRLPETSN 324 Query: 265 -----------ILLGLFATLLQAKGTLRLDKDARP-----LLLIEDPETRLHPIMLSV-- 306 L F K ++ A L+LIE+PE LH + V Sbjct: 325 GLGYQNLISMIFRLMAFRDEWLKKFRTADEQSAAGVEPIHLMLIEEPEAHLHVQVQQVFV 384 Query: 307 -----------AWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSG 355 L Q + +T+S + +++ R + + ++ S Sbjct: 385 KHAYHVLCRDPLLERFPNLKSQLMVSTHSSHVAHEVEYQNLRYFRRLPAGMDGVQVPVST 444 Query: 356 LS---------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDA 406 +S + ++ ++R FA +LVEG E ++ R+ D Sbjct: 445 VSNLSTVFGKKPQTKDFVTRYLRAQHADLFFADAVILVEGAAERMMLPHFLRKHFPFLDQ 504 Query: 407 EGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 I +++ S L+ +GI V+ D D + A V+ Sbjct: 505 CYITILDIGGSHAHRLLPLIDALGIVTLVITDLDAGSLRSAQPVQR 550 >UniRef50_Q65SR3 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65SR3_MANSM Length = 610 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 107/333 (32%), Gaps = 18/333 (5%) Query: 146 QARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQI 205 + L + RF+ R G + Q D ++ N ++ + Sbjct: 42 LLKGLKESFSGFTEKKVRFLSAGRLGPLEQY---RSNYDQFDRSNESDNARHGNKNEREY 98 Query: 206 RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS-NEQRSWRYLDIINRMIDRPGGRSYRV 264 R + + L + +++ N W + +Y Sbjct: 99 RHKIENINGDLHTLSARPDILIKVRERLQKLFKRNIDVDWDAGSLKISFSRLGATNTYYS 158 Query: 265 ILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL-------- 316 L L D +LLI++PE LHP + + + Sbjct: 159 SGREASGLLHLVGILSALYDDEVGVLLIDEPEVSLHPQLQAFLLKEIQRAAGIPNDDDYK 218 Query: 317 -QRIATTNSGELLSLTPVEHVCRLVRESS---RVAAWRLGPSGLSTEDSRRISFHIRFNR 372 I T+S E+L ++ + + + L+ + + + + Sbjct: 219 KLIIMATHSTEMLKISNSNSLLNFIFCNDLKENPIQIAQNAGELNNKKVKGLIARLGQEH 278 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGI 431 +LF++ LLVEG ++ + N L+ + + +A G +++ P VK R MG Sbjct: 279 KLALFSKTPLLVEGPSDVIICNALSDKLYLNLEAAGSQILPINGKEAMPETVKLLRLMGK 338 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREH 464 VLVD D V + NN E+ + Sbjct: 339 NPTVLVDADAFADGLNL-VNAYFNNTEIKEKAN 370 >UniRef50_C3I020 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I020_BACTU Length = 798 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 102/334 (30%), Gaps = 48/334 (14%) Query: 157 LRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL 216 + L + R + ++ + N + D+ ++ + + + + + + + Sbjct: 255 INLNNTRKLSKLFSSYYSEYLNPINQYSEKDYTILNAVTNSKKAFKQHLEESIKPIQKKM 314 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQRSWRYL------DIINRMI-----DRPGGRSYRVI 265 + + S+ + L D IN G +I Sbjct: 315 GDLGYPGFGSPSITVRPQINLSDSIKGEASLLLNTHKDGINDEQYFLPEHNNGLGYQNLI 374 Query: 266 LLGLFATLLQAK-----GTLRLDKDARPLLLIEDPETRLHPIMLSVA----WHLLN---- 312 + + + + G + L+LIE+PE LH V + L+ Sbjct: 375 AMFFKLNIFKQERLAYGGENEKIIEPLHLMLIEEPEAHLHAQAQKVFIDKAYELIKVSLE 434 Query: 313 ------LLPLQRIATTNSGELLSLTPVEHVCRLVRESS----RVAAWRLGPSGLSTE--- 359 Q + +T+S + ++ + R+ L L Sbjct: 435 ETGINASFTTQLLISTHSSHITYKADIDELIYFNRKLQDDVFSSEVINLKDVPLDPNAIF 494 Query: 360 -----------DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 + + + +++ FA +L+EG +E ++ EL R+ + Sbjct: 495 NDEDEQLKGLSNKKFVQKYLQLYEHDLFFADAVILIEGVSERILLPELIRKHVTSLTSRY 554 Query: 409 IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 I ++E + + F + + ++ D D Sbjct: 555 ITILEIGGAYANRFIPFLKAINRPTLIITDIDSV 588 Score = 42.8 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDL 52 M +E++ I ++ + + + L Q N+ IG N GK+S ++ L L+ + Sbjct: 1 MFIEKLNIKNYKKLKDVKVCLSQKQNLFIGPNNSGKTSAIEILVKFLTDKKSF 53 >UniRef50_A1VWE3 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A1VWE3_POLNA Length = 769 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 84/247 (34%), Gaps = 29/247 (11%) Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 G A M++ + E + + + + +S L+ A L + Sbjct: 351 GTAVQYSMQKDSLEELLPEYSIGLGYQNL-----QSLSYQLVSFKAARL---KPEKGSPA 402 Query: 286 ARPLLLIEDPETRLHPIMLSVA-----------WHLLNLLPLQRIATTNSGELLSLTPVE 334 L++IE+PE LH + + + L Q + +T+S L + Sbjct: 403 PVHLVMIEEPEAHLHVQVQRIFPDKAHKLISPTEKEASALKSQLLISTHSSHLAHAENFD 462 Query: 335 HVCRLVRESSRVAAWRLGPSGL---------STEDSRRISFHIRFNRPSSLFARCWLLVE 385 + R VR ++ AA + + + + + + R LFA + VE Sbjct: 463 RL-RYVRRIAKSAANPMPTTEVVNLGKVFGEDKKTRQFAERYFRVQHTDLLFANAAIFVE 521 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 G E ++ + ++ + ++ S L ++ I ++ D D +K Sbjct: 522 GLAERMLVPLFIERDFKTLNSRYVSFLDIGGSHAHRLKPLVEKLRIPTVIITDIDPTEEK 581 Query: 446 YAATVRS 452 ++ Sbjct: 582 AGKPKKN 588 >UniRef50_C4XSY5 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSY5_DESMR Length = 539 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 90/520 (17%), Positives = 166/520 (31%), Gaps = 87/520 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFE-RDD 59 M L + + FR I + +++ LIG N GKS++L A+ LLS L F+ + Sbjct: 11 MRLHSLCLRNFRRIKQATILFGDTTFLIGPNNVGKSTVLAAIGCLLSVSESLSEFDYNCE 70 Query: 60 FWFPPGDINGREHHLHIILTFRES--LPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG- 116 +I + I FR R + R + D + +R Sbjct: 71 GEVCAEEIVDKCTECSIEAEFRNLPVEANSWRGFKGRLIRYETKNENDSGLSVVFRKSFS 130 Query: 117 -------------ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR--- 160 + + D ID E + + L + + +L Sbjct: 131 KSSKSCIREMKCYSRVKKSEFENIVKARDLIDRGIDSELVEELFPELDKKLSKAQLEKLE 190 Query: 161 ---------DARFMRRIRNG------TVPNVPN-----VEVTARQLDFLARELSS----- 195 D+ + N + +P E +A LD + EL++ Sbjct: 191 EINDIWIVDDSGVSEWVNNPGGIHSVVISKLPLYIKIPAEHSAAALDQKSGELATFMNEL 250 Query: 196 --------------------HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 + L+ S M+ L + + Sbjct: 251 FREIREASDNYGKAVKYLALLAEELNPEDQESEFSRMMDDLNGVINSVFPESKLHATASL 310 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD--ARPLLL-I 292 +++ + ++ + P ++ LL+ + + +RPL++ Sbjct: 311 NDADKSLVPVFTINMSSNVKTPVAYQGTGMIRSAIFALLKFRHEWIHKRKGLSRPLIIGF 370 Query: 293 EDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELL--SLTPVEHVCRLVRESSRVA 347 E+PE LHP + + L + Q I T++S ++ S P + + R+ V Sbjct: 371 EEPEIYLHPNAANQMRDTIYDLSIGSSQIICTSHSPYMIDLSRKPCQVLNRMSVVDGAVC 430 Query: 348 AWRLGPSG----LSTEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINELARQCG 401 S L +D + I+ + FA+ ++VEG+TE V+ E + Sbjct: 431 VVPFNVSDAYLNLVDKDRTYVKMLIKMDDYISRVFFAKKVIIVEGDTEDIVLRETFSRLP 490 Query: 402 HHFDAE---GIKVIE----FAQSGLKPLVKFARRMGIEWH 434 A ++V+ A SG P A M I H Sbjct: 491 ADVKARVYADVQVVNRPLQKAVSGYSPPQMMAMGM-IPQH 529 >UniRef50_C0N1Y3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1Y3_9GAMM Length = 595 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 88/597 (14%), Positives = 188/597 (31%), Gaps = 87/597 (14%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS--------PESD 51 M L+++++ FR + LIG N GK+S+LDAL + + Sbjct: 1 MKLKKLKVQNFRAYQTETEISFSNMTGLIGRNDVGKTSILDALGIFFGHKLCKYEAGDKC 60 Query: 52 LYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRR------------------- 92 +Y E +D + + + T SL + + Sbjct: 61 VYAGENEDVIITC-EFEELPQEIVLDATSVTSLDREYLLTDGGTLSLSKVFKKGKGSGAY 119 Query: 93 --------YRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRS---------FLDKDG 135 R + D I L + ++ S ++LR L + Sbjct: 120 MANCVHPSARNAKGILLKKNDELKSIAQSLGIAAEDNRSNVSLREAIYDAVGDLKLKEQS 179 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSS 195 + ED + +P L R R T + + ++S Sbjct: 180 VALSKEDGKAILEQIQNHLPHFAL-----FRADRPSTDEEAEVQDPMKVAISQAIEDISP 234 Query: 196 HPQNLSDGQIRQGLSAMVQLLEHY--FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM 253 +++ D ++ L+ L H + A + Sbjct: 235 QLEDIKDQVKQRALTVANSTLSHLADLDPELAMSLTPDFKADPKWEGIFKLSLAGDDDIP 294 Query: 254 IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL 313 I++ G R++L+ F +A+ R +D + IE+PE HP + + Sbjct: 295 INKRGSGVRRLVLISFFKA--EAERIKREYQDRGVIYAIEEPENSQHPDKQKLLVEAFSE 352 Query: 314 LPL----QRIATTNSGELLSLTPVEHVCRLVRESS---RVAAWRLGPSGLSTEDSRRISF 366 + Q + TT+ L P++ + + + V + + L +D + Sbjct: 353 MADKDGCQIVITTHVPALAEQLPIKSIRHIFKNQDGEIEVNSNQDDVFKLIAKDLGVLP- 411 Query: 367 HIRFNRPSSLFARCWLLVEGETETWVINELARQC---GH---HFDAEG-IKVIEFAQSGL 419 +R A+ + VEG + L+ GH F+ + I ++ L Sbjct: 412 ---DSR-----AQVIVCVEGPNDIAFFKNLSALLLDEGHMAPDFENDPRIVLLPLGGDTL 463 Query: 420 KPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 + V + + +G + D D+ +N + +T+ + E+++ Sbjct: 464 RDWVNGHYLKNIGKPEVHIYDRDDQNPPKYQETCDAVNARGDGSIAFITS--KREAENYL 521 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAI---HRSSKPDLAIEVAMEAGRRGVDS 531 + + + ++ + ++ A+ R++K L A + + +D Sbjct: 522 HPDAIQEALNISVTYTDDCDVPS--LVGAALGVNDRTAKRRLNRVAAKKMTKERLDG 576 >UniRef50_C4TV98 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C4TV98_YERKR Length = 808 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 61/421 (14%), Positives = 133/421 (31%), Gaps = 56/421 (13%) Query: 83 SLPGRHRVRRYRPLE--ACWTPCTDGYHRIF-YRLEGESAE-DGSVMTLRSFLDKDGHPI 138 + + P++ W ++ Y+L+ ++ DG + LD D PI Sbjct: 212 PVKDMGKDSLAWPIDLLDFWLREPSQLGQVRAYKLDADNNPLDGIKTYVSQVLDADSSPI 271 Query: 139 DVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARE--LSSH 196 D + + L+++ V R + + + + + QL AR+ + Sbjct: 272 DRKHLQK----LIKVDFVAAQR-GLGSEEADSRSASGPHRIGLFSNQLLKFARQHLNVAA 326 Query: 197 PQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY--------- 246 + I+ A +L + G + + ++ + R+ Sbjct: 327 TGHGHRADLIKAVAEAQQELDKKIHEAIGPSVEEVKELGYPGLHDPQEIRFRTRIQTADL 386 Query: 247 ------------LDIINRMIDRP--GGRSYRVILLGLFATLLQAKGTLRLDKDARP--LL 290 D + ++ G + L +A P L+ Sbjct: 387 LDHGTAVQYSMQKDSLEELLPEYSIGLGYQNLQSLSYQLVSFKAARLNPEKGAPVPVHLV 446 Query: 291 LIEDPETRLHPIMLSVA----WHLLN-------LLPLQRIATTNSGELLSLTP---VEHV 336 +IE+PE LH + + L++ L Q I +T+S L + +V Sbjct: 447 MIEEPEAHLHVQVQRIFPGKAHKLISPNGSDELGLKSQLIISTHSSHLAHAENFDRLRYV 506 Query: 337 CRLVRESSRVAAWR--LGPSGLSTEDS---RRISFHIRFNRPSSLFARCWLLVEGETETW 391 R+ + + + + +D + + R LFA + VEG E Sbjct: 507 RRIAKSDEQTMPTTEVVNLGQVFGDDKTTRQFAERYFRVQHTDLLFANAAIFVEGVAERM 566 Query: 392 VINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 ++ + ++ + ++ S L R+ I ++ D D +K + Sbjct: 567 LLPLFIERDFAILNSRYLSFLDIGGSHAHRLRSLVERLRIPTVIITDIDPVEEKLGKPKK 626 Query: 452 S 452 + Sbjct: 627 N 627 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 3 LERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHF 55 L VE+ FR + ++ L ++ +L+G N GK+S+L AL L+ S F Sbjct: 55 LRFVELCQFRRLGKVQLEIDPKTTILVGANNSGKTSILAALRHFLADGSSFGAF 108 >UniRef50_UPI0001C42FF5 hypothetical protein BpOF4_21974 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42FF5 Length = 486 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 115/323 (35%), Gaps = 34/323 (10%) Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 ++++ N LD LA+EL+ + + LS + +++ F E G Sbjct: 92 LKQLFEDVRNESDNFRQAQHYLDQLAKELNPDDD---ESEFASLLSDLNRVVGDVFPETG 148 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT--LLQAKGTLRL 282 + + I+ +D G R + + + + R Sbjct: 149 FLAKANLSNADKVITPNFDVKLGSNIHTTVDYQGAGVIRSAVFAMLRYRSIRENNKKKRS 208 Query: 283 DKDARPLLL-IEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLT----PV 333 + RPLL+ E+PE LHP + L Q I TT+S ++ L+ + Sbjct: 209 SEYIRPLLIAFEEPEIYLHPQAAKQMRDTIYDLSLEDNNQIICTTHSPYMIDLSRKANQI 268 Query: 334 EHVCRL----------VRESSRVAAWRLGPSG----LSTEDSRRISF--HIRFNRPSSLF 377 + L R V S L +D I I + F Sbjct: 269 LNSFHLEDHEIDHDGTKRNVDIVVCNPFNVSKAFINLLDDDKSYIKMLLKIDDDISKVFF 328 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAE---GIKVIEFAQSG-LKPLVKFARRMGIEW 433 +R L++EG+TE VI E + + E +V+ + LVK+ R +GI Sbjct: 329 SRNVLIIEGDTEEVVIRETLSRMPNELYKEFSYNWEVVRARGKATIISLVKYLRALGITP 388 Query: 434 HVLVDGDEAGKKYAATVRSLLNN 456 V+ D D+ +K + + +L+ Sbjct: 389 FVIHDRDKDTEKAYSFNQPILDA 411 >UniRef50_Q8E4Q9 Putative uncharacterized protein gbs1342 n=2 Tax=Bacilli RepID=Q8E4Q9_STRA3 Length = 746 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 87/582 (14%), Positives = 175/582 (30%), Gaps = 113/582 (19%) Query: 1 MILERVEIVGFRG---------------------------INRLSLMLEQNNVLI-GENA 32 M L+ + I +R INR + +++ LI G+N Sbjct: 1 MYLKSLSIKNYRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIVGKNN 60 Query: 33 WGKSSLLDALTLLLSPESDLYH-FERDDF-------WFPPGDINGREHHLHII------- 77 GKS+++ L L + +S + F+ DF W+ N + + I Sbjct: 61 SGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPK 120 Query: 78 LTFRESLPGRHRVRRYRPLEACWTPC---TDGYHRIFYRLEGESAEDGSVMTLRSFLDK- 133 L F+ L E T G H E V ++SFL++ Sbjct: 121 LEFQLILGIDDENDLISSFEDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEEL 180 Query: 134 ----------DGHPIDVEDINDQARHLVRLM----------PVLRLRDARF--------M 165 + R + L P+ R A+ + Sbjct: 181 VKIKSSPREKIEQYDQGYQKELRYRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKV 240 Query: 166 RRIRNGTVPNVPNVEVTAR-------------QLDFLARELSSHPQNLSDGQIRQGLSAM 212 I TV N + ++D L +++ +++ D I+ L + Sbjct: 241 ATIEANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSA 300 Query: 213 VQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 V +E + + + + +N N + G ++++ Sbjct: 301 VSSIESTKNLKMNLHPDVT-LEKIFANSIIYEYQEGNNNIPESQFGMGYTNLMVIIAKIV 359 Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL------------PLQRIA 320 + + + +L IE+PE+ +HP M + ++ Q I Sbjct: 360 DYIELYSEKDINGSVNILCIEEPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQIII 419 Query: 321 TTNSGELLSLT-----PVEHVCRL--VRESSRVAAWR----LGPSGLSTEDSRRISFHIR 369 TT+S +L+ + ++ L V ++ + + + I ++R Sbjct: 420 TTHSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYEYIKKYLR 479 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRM 429 FA +LVEG +E + + +KV + + + Sbjct: 480 LEITDIFFADAVVLVEGVSEETYLRYEIDRHSI-LKNHHVKVYRIDGAYAHQFISLLDLL 538 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 G+ + D D + V N + + ++ L Sbjct: 539 GVRTVIFTDLDLKRSESEKKVDIKDNAEPDVIPSNIPDLEEK 580 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobac... 504 e-141 UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadacea... 432 e-119 UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate h... 424 e-117 UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrion... 407 e-112 UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the O... 406 e-111 UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Ga... 403 e-110 UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family pro... 370 e-101 UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candida... 370 e-101 UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1... 369 e-100 UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synecho... 369 e-100 UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillu... 341 5e-92 UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8... 325 3e-87 UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escheri... 277 7e-73 UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acineto... 267 1e-69 UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterob... 266 1e-69 UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteob... 265 3e-69 UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD ... 264 4e-69 UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-lik... 263 1e-68 UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafiel... 262 3e-68 UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteob... 260 7e-68 UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alk... 260 7e-68 UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepI... 257 7e-67 UniRef50_A1VV80 Transcriptional regulator, Fis family n=15 Tax=P... 248 5e-64 UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldi... 242 3e-62 UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms Re... 239 2e-61 UniRef50_Q84GD0 Yga2G n=1 Tax=Corynebacterium glutamicum RepID=Q... 237 7e-61 UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteo... 237 9e-61 UniRef50_B2PZ40 Putative uncharacterized protein n=1 Tax=Provide... 235 5e-60 UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobi... 232 2e-59 UniRef50_B5XVI7 OLD family TOPRIM nucleotidyl transferase/hydrol... 232 3e-59 UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepI... 231 6e-59 UniRef50_B4EWQ2 Putative plasmid-related protein n=2 Tax=Gammapr... 230 7e-59 UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1... 229 2e-58 UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptoc... 226 2e-57 UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralston... 225 4e-57 UniRef50_B4ACT9 Possible ATP-binding nuclease n=1 Tax=Enterococc... 224 5e-57 UniRef50_A7N6N8 Putative uncharacterized protein n=2 Tax=Vibrion... 222 4e-56 UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bactero... 222 4e-56 UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiel... 221 5e-56 UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1... 220 1e-55 UniRef50_Q5WI68 Putative uncharacterized protein n=3 Tax=Bacillu... 220 1e-55 UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1... 220 1e-55 UniRef50_C2TVV6 Putative uncharacterized protein n=1 Tax=Bacillu... 219 2e-55 UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clo... 219 2e-55 UniRef50_B4BQS2 SMC domain protein n=1 Tax=Geobacillus sp. G11MC... 218 4e-55 UniRef50_A3VYF2 Putative uncharacterized protein n=1 Tax=Roseova... 217 6e-55 UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) fami... 217 1e-54 UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 T... 217 1e-54 UniRef50_Q21PB9 ATP-dependent endonuclease of the OLD family n=3... 216 2e-54 UniRef50_Q07JA2 ATP-dependent endonuclease of the OLD family-lik... 216 2e-54 UniRef50_C7PQN7 Plasmid-related protein n=1 Tax=Chitinophaga pin... 215 3e-54 UniRef50_C7X4G8 SMC domain-containing protein n=1 Tax=Parabacter... 215 4e-54 UniRef50_B8GG54 SMC domain protein n=1 Tax=Methanosphaerula palu... 215 4e-54 UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM... 215 4e-54 UniRef50_C7VU27 Putative uncharacterized protein n=1 Tax=Enteroc... 214 5e-54 UniRef50_B9MK40 Putative uncharacterized protein n=1 Tax=Anaeroc... 214 6e-54 UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwards... 213 1e-53 UniRef50_A1VKY5 ATP-dependent endonuclease of the OLD family n=1... 213 1e-53 UniRef50_C0QF29 Putative uncharacterized protein n=1 Tax=Desulfo... 213 1e-53 UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaprot... 213 1e-53 UniRef50_C2NJX4 Putative uncharacterized protein n=1 Tax=Bacillu... 212 3e-53 UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ec... 212 3e-53 UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fi... 212 3e-53 UniRef50_Q24NG6 Putative uncharacterized protein n=4 Tax=cellula... 210 8e-53 UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea... 210 8e-53 UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methano... 210 1e-52 UniRef50_D1NL89 SMC domain protein n=7 Tax=Bacteria RepID=D1NL89... 210 1e-52 UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicu... 209 2e-52 UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepI... 208 6e-52 UniRef50_B5V0C9 ATP-dependent endonuclease of the OLD family n=1... 208 6e-52 UniRef50_C7NT09 ATP-dependent endonuclease of the OLD family-lik... 207 7e-52 UniRef50_B1I298 ATP-dependent endonuclease, OLD family protein n... 207 7e-52 UniRef50_C2I056 Putative uncharacterized protein n=1 Tax=Vibrio ... 207 9e-52 UniRef50_A6AAK9 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio ch... 207 1e-51 UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacte... 206 2e-51 UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostri... 206 2e-51 UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillu... 205 3e-51 UniRef50_C3B2Y6 Putative uncharacterized protein n=2 Tax=Bacillu... 205 4e-51 UniRef50_C2MCD2 RecF/RecN/SMC N domain protein n=2 Tax=Bacteroid... 205 5e-51 UniRef50_C3HBD5 Putative uncharacterized protein n=1 Tax=Bacillu... 204 7e-51 UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteri... 204 8e-51 UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryante... 203 1e-50 UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobilun... 202 2e-50 UniRef50_B9JNX5 Putative uncharacterized protein n=2 Tax=Rhizobi... 202 3e-50 UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bactero... 202 3e-50 UniRef50_Q2N9H1 Predicted ATP-dependent endonuclease, OLD family... 201 7e-50 UniRef50_A1SC11 SMC domain protein n=2 Tax=Actinomycetales RepID... 200 1e-49 UniRef50_UPI0001746ACF ATP-dependent endonuclease of the OLD fam... 199 2e-49 UniRef50_A0K383 ATP-dependent endonuclease of the OLD family-lik... 199 2e-49 UniRef50_C6D7P9 Putative uncharacterized protein n=1 Tax=Paeniba... 199 3e-49 UniRef50_Q2IEH8 ATP-dependent endonuclease of the OLD family-lik... 198 5e-49 UniRef50_C7Q3I3 ATP-dependent OLD family endonuclease n=1 Tax=Ca... 198 5e-49 UniRef50_Q64X74 Putative uncharacterized protein n=1 Tax=Bactero... 198 6e-49 UniRef50_C0WFY9 ATP-dependent OLD family endonuclease n=1 Tax=Co... 198 6e-49 UniRef50_A9C2Y9 ATP-dependent endonuclease family protein n=3 Ta... 197 8e-49 UniRef50_Q1LEC3 ATP-dependent endonuclease of the OLD family-lik... 197 1e-48 UniRef50_Q5NYH6 Putative uncharacterized protein n=3 Tax=Betapro... 195 4e-48 UniRef50_C6WN28 ATP-dependent endonuclease of the OLD family-lik... 195 5e-48 UniRef50_A8RV16 Putative uncharacterized protein n=1 Tax=Clostri... 194 6e-48 UniRef50_C1EJU5 RecF/RecN/SMC N domain protein n=2 Tax=Bacilli R... 194 6e-48 UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropher... 194 7e-48 UniRef50_C0XXA7 ATP-dependent endonuclease, OLD family n=2 Tax=B... 194 9e-48 UniRef50_Q6A9G0 Putative uncharacterized protein n=1 Tax=Propion... 193 1e-47 UniRef50_Q73M88 Putative uncharacterized protein n=1 Tax=Trepone... 193 1e-47 UniRef50_A1S4L2 ATP-dependent endonuclease of the OLD family n=1... 193 1e-47 UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algorip... 192 2e-47 UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria ... 192 2e-47 UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-lik... 192 2e-47 UniRef50_D1PF96 Putative uncharacterized protein n=1 Tax=Prevote... 192 3e-47 UniRef50_D0SCV0 ATP-dependent OLD family endonuclease n=2 Tax=Ac... 192 3e-47 UniRef50_Q11KX7 ATP-dependent endonuclease of the OLD family-lik... 192 4e-47 UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Ta... 191 5e-47 UniRef50_B2GJX2 Putative uncharacterized protein n=1 Tax=Kocuria... 191 6e-47 UniRef50_A8SH00 Putative uncharacterized protein n=1 Tax=Faecali... 191 6e-47 UniRef50_B9JB64 Chromosome partition protein n=3 Tax=Alphaproteo... 191 8e-47 UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family... 188 3e-46 UniRef50_C7NQX8 SMC domain protein n=1 Tax=Halorhabdus utahensis... 187 8e-46 UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candida... 187 1e-45 UniRef50_C7T9Q2 Putative uncharacterized protein n=1 Tax=Lactoba... 187 1e-45 UniRef50_C7XKH1 DNA helicase associated protein n=1 Tax=Lactobac... 186 2e-45 UniRef50_B5EKT6 ATP-dependent endonuclease, OLD family n=1 Tax=A... 186 3e-45 UniRef50_Q5JHA7 Predicted ATP-dependent endonuclease, OLD family... 184 7e-45 UniRef50_B8DW92 Predicted ATP-dependent endonuclease, OLD family... 184 8e-45 UniRef50_UPI0001B4CEC2 SMC domain-containing protein n=1 Tax=Str... 184 9e-45 UniRef50_A3Y2D0 Predicted ATP-dependent endonuclease, OLD family... 184 9e-45 UniRef50_B2VB80 Predicted ATP-dependent endonuclease of the OLD ... 183 1e-44 UniRef50_Q935U7 Putative ATP/GTP-binding protein n=1 Tax=Strepto... 182 3e-44 UniRef50_C0E1U9 Putative uncharacterized protein n=1 Tax=Coryneb... 182 3e-44 UniRef50_C2FX67 SMC domain protein n=1 Tax=Sphingobacterium spir... 182 3e-44 UniRef50_C7PFH0 ATP-dependent endonuclease, OLD family n=1 Tax=C... 182 3e-44 UniRef50_Q19NH8 ATP/GTP-binding protein n=6 Tax=Enterobacteriace... 182 4e-44 UniRef50_Q3B1R7 ATP-dependent endonuclease of the OLD family-lik... 182 4e-44 UniRef50_B8FVQ2 ATP-dependent endonuclease of the OLD family-lik... 182 4e-44 UniRef50_A8SQN9 Putative uncharacterized protein n=1 Tax=Coproco... 182 4e-44 UniRef50_Q2BBA4 Predicted ATP-dependent endonuclease of the OLD ... 180 8e-44 UniRef50_C9M1X4 Putative uncharacterized protein n=1 Tax=Lactoba... 180 1e-43 UniRef50_A4AD51 Predicted ATP-dependent endonuclease, OLD family... 180 1e-43 UniRef50_A9G4V7 Putative old protein n=1 Tax=Sorangium cellulosu... 180 1e-43 UniRef50_C0N1Y3 Putative uncharacterized protein n=1 Tax=Methylo... 180 1e-43 UniRef50_C4B7R0 Putative endonuclease n=1 Tax=Desulfotignum balt... 180 2e-43 UniRef50_D2UFF3 Putative uncharacterized protein n=1 Tax=Xanthom... 180 2e-43 UniRef50_A6X3P4 ATP-dependent endonuclease, OLD family protein n... 179 2e-43 UniRef50_Q138G7 ATP-dependent endonuclease of the OLD family-lik... 179 3e-43 UniRef50_C9RMQ8 Putative uncharacterized protein n=1 Tax=Fibroba... 179 3e-43 UniRef50_Q4JUU2 Putative uncharacterized protein n=2 Tax=Coryneb... 179 3e-43 UniRef50_C8SCF2 SMC domain protein n=1 Tax=Ferroglobus placidus ... 178 4e-43 UniRef50_Q3IKC8 Putative orphan protein n=3 Tax=Bacteria RepID=Q... 178 4e-43 UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paeniba... 178 4e-43 UniRef50_A8FWW1 ATP-dependent endonuclease of the OLD family n=3... 177 9e-43 UniRef50_Q5LP69 Putative uncharacterized protein n=1 Tax=Ruegeri... 177 9e-43 UniRef50_C6W937 SMC domain protein n=1 Tax=Actinosynnema mirum D... 177 9e-43 UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Cl... 177 1e-42 UniRef50_B4S792 ATP-dependent endonuclease of the OLD family-lik... 177 1e-42 UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax... 176 1e-42 UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-lik... 176 2e-42 UniRef50_A6BKR5 Putative uncharacterized protein n=2 Tax=Bacteri... 176 2e-42 UniRef50_B4SKF9 OLD family ATP-dependent endonuclease-like prote... 176 2e-42 UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphapr... 175 3e-42 UniRef50_A9AVV6 ATP-dependent endonuclease of the OLD family-lik... 175 3e-42 UniRef50_A5FDQ0 ATP-dependent endonuclease of the OLD family-lik... 175 4e-42 UniRef50_B0S1X8 Putative uncharacterized protein n=3 Tax=Firmicu... 175 4e-42 UniRef50_B2SJS5 Putative uncharacterized protein n=2 Tax=Xanthom... 174 7e-42 UniRef50_C0BU00 Putative uncharacterized protein n=1 Tax=Bifidob... 174 7e-42 UniRef50_Q13XN0 Predicted ATP-dependent endonuclease, OLD family... 174 8e-42 UniRef50_A2SK58 ATP-dependent endonuclease of the OLD family-lik... 173 2e-41 UniRef50_B1LUG1 Putative uncharacterized protein n=1 Tax=Methylo... 172 3e-41 UniRef50_A3EUF6 Putative uncharacterized protein n=3 Tax=Bacteri... 172 3e-41 UniRef50_A9L496 ATP-dependent endonuclease of the OLD family-lik... 171 4e-41 UniRef50_C6X564 Putative uncharacterized protein n=1 Tax=Flavoba... 171 7e-41 UniRef50_C6BF20 ATP-dependent OLD family endonuclease n=1 Tax=Ra... 171 7e-41 UniRef50_A9HWQ9 Putative uncharacterized protein n=3 Tax=Proteob... 170 1e-40 UniRef50_B0P4C0 Putative uncharacterized protein n=1 Tax=Clostri... 170 1e-40 UniRef50_Q6M0D9 Putative uncharacterized protein n=1 Tax=Methano... 170 2e-40 UniRef50_B0QUR6 Predicted ATP-dependent endonuclease of the OLD ... 169 2e-40 UniRef50_B0A6Q1 Putative uncharacterized protein n=2 Tax=Clostri... 169 3e-40 UniRef50_C4Z3V4 Putative ATP-dependent endonuclease of the OLD f... 168 4e-40 UniRef50_Q0HJ47 ATP-dependent endonuclease of the OLD family-lik... 168 4e-40 UniRef50_A6Y4R5 Putative uncharacterized protein n=1 Tax=Vibrio ... 168 6e-40 UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio ... 168 6e-40 UniRef50_A4J2V4 ATP-dependent endonuclease of the OLD family-lik... 167 1e-39 UniRef50_D2LK58 Putative uncharacterized protein n=1 Tax=Rhodomi... 167 1e-39 UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanoc... 167 1e-39 UniRef50_B6B531 RecF/RecN/SMC N terminal domain protein n=1 Tax=... 166 1e-39 UniRef50_C1M6V5 SMC domain-containing protein n=1 Tax=Citrobacte... 166 1e-39 UniRef50_Q7N8W7 Similar to unknown protein n=10 Tax=Bacteria Rep... 166 2e-39 UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Strepto... 165 3e-39 UniRef50_A3XJ07 Putative uncharacterized protein n=1 Tax=Leeuwen... 165 4e-39 UniRef50_B2KB28 ATP-dependent endonuclease of the OLD family n=1... 165 4e-39 UniRef50_A7JZX6 Pathogenesis related protein n=4 Tax=cellular or... 165 4e-39 UniRef50_A1B1Z6 Putative uncharacterized protein n=2 Tax=Rhodoba... 165 4e-39 UniRef50_Q1D0Z7 Putative uncharacterized protein n=1 Tax=Myxococ... 165 4e-39 UniRef50_A7WYC4 Putative uncharacterized protein n=6 Tax=Bacilli... 165 5e-39 UniRef50_C1MEQ6 Putative uncharacterized protein n=2 Tax=Enterob... 165 6e-39 UniRef50_B3Z268 Putative uncharacterized protein n=2 Tax=Bacillu... 164 7e-39 UniRef50_D2RJW4 ATP-dependent endonuclease of the OLD family-lik... 164 1e-38 UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family... 163 1e-38 UniRef50_B9MK32 ATP-dependent OLD family endonuclease n=2 Tax=Cl... 163 1e-38 UniRef50_B0P1G3 Putative uncharacterized protein n=1 Tax=Clostri... 163 1e-38 UniRef50_D1B1K9 Putative uncharacterized protein n=2 Tax=Proteob... 163 1e-38 UniRef50_A9VQW9 Putative uncharacterized protein n=1 Tax=Bacillu... 163 2e-38 UniRef50_C6PLM4 SMC domain protein n=2 Tax=Thermoanaerobacter Re... 162 2e-38 UniRef50_Q1WRW0 Putative uncharacterized protein n=1 Tax=Lactoba... 162 3e-38 UniRef50_C1DUM9 ATP/GTP-binding protein n=1 Tax=Sulfurihydrogeni... 161 4e-38 UniRef50_B4BS89 SMC protein-like protein n=1 Tax=Geobacillus sp.... 161 5e-38 UniRef50_B2JTM2 Initiation factor 2 associated domain protein n=... 161 6e-38 UniRef50_UPI0001BC7DE3 hypothetical protein BacD2_01103 n=1 Tax=... 161 7e-38 UniRef50_A9VNT7 Putative uncharacterized protein n=2 Tax=Bacillu... 160 2e-37 UniRef50_A3DGM5 SMC protein-like protein n=1 Tax=Clostridium the... 159 2e-37 UniRef50_A9BIN7 ATP-dependent endonuclease of the OLD family n=3... 159 3e-37 UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-lik... 158 5e-37 UniRef50_B7GJZ0 Predicted ATP-dependent endonuclease of the OLD ... 158 5e-37 UniRef50_A8T0E4 Putative uncharacterized protein n=1 Tax=Vibrio ... 158 7e-37 UniRef50_A3ELC8 Putative uncharacterized protein n=1 Tax=Vibrio ... 156 1e-36 UniRef50_B8FD16 SMC domain protein n=3 Tax=Proteobacteria RepID=... 156 2e-36 UniRef50_Q3ID90 Putative uncharacterized protein n=1 Tax=Pseudoa... 156 2e-36 UniRef50_B8FV59 ATP-dependent endonuclease of the OLD family-lik... 155 3e-36 UniRef50_A5VKD5 AAA ATPase n=4 Tax=Lactobacillus reuteri RepID=A... 155 3e-36 UniRef50_C5T1P1 Putative uncharacterized protein n=1 Tax=Acidovo... 155 6e-36 UniRef50_Q7WY48 Pathogenesis-related protein n=5 Tax=Proteobacte... 154 8e-36 UniRef50_B2FTZ5 Putative uncharacterized protein n=1 Tax=Stenotr... 153 1e-35 UniRef50_B3Q3S3 Hypothetical conserved protein n=1 Tax=Rhizobium... 153 1e-35 UniRef50_B0SBA1 ATP-dependent endonuclease n=2 Tax=Leptospira bi... 153 2e-35 UniRef50_Q8PTL3 Putative uncharacterized protein n=1 Tax=Methano... 153 2e-35 UniRef50_Q5Z006 Putative uncharacterized protein n=1 Tax=Nocardi... 153 2e-35 UniRef50_C8X700 Putative uncharacterized protein n=2 Tax=Bacteri... 152 2e-35 UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxy... 152 3e-35 UniRef50_Q3IVS1 Putative uncharacterized protein n=2 Tax=Rhodoba... 152 3e-35 UniRef50_UPI0001694BEA putative old protein n=1 Tax=Paenibacillu... 152 3e-35 UniRef50_C9LL80 Putative uncharacterized protein n=1 Tax=Dialist... 151 4e-35 UniRef50_UPI0001C41A1B RecF/RecN/SMC N terminal domain-containin... 151 5e-35 UniRef50_D1RHV6 Putative uncharacterized protein n=1 Tax=Legione... 151 6e-35 UniRef50_A6LLZ6 ATP-dependent endonuclease of the OLD family-lik... 151 7e-35 UniRef50_B2DN28 RecF/RecN/SMC N domain protein n=2 Tax=Streptoco... 150 1e-34 UniRef50_C7RGV9 Overcoming lysogenization defect protein n=6 Tax... 150 1e-34 UniRef50_B7H4E2 Overcoming lysogenization defect protein n=1 Tax... 150 2e-34 UniRef50_C9NKQ7 Putative uncharacterized protein n=1 Tax=Strepto... 149 2e-34 UniRef50_A1SXR8 Putative uncharacterized protein n=1 Tax=Psychro... 148 4e-34 UniRef50_B1KR76 Putative uncharacterized protein n=3 Tax=Gammapr... 148 5e-34 UniRef50_Q1IBB5 Putative uncharacterized protein n=1 Tax=Pseudom... 148 5e-34 UniRef50_UPI0001873D90 hypothetical protein PSPTOT1_4227 n=1 Tax... 148 5e-34 UniRef50_C4FPP4 Putative uncharacterized protein n=1 Tax=Veillon... 148 6e-34 UniRef50_Q0SWM6 Putative uncharacterized protein n=1 Tax=Clostri... 147 8e-34 UniRef50_UPI0001C37B2B hypothetical protein RflaF_15454 n=1 Tax=... 147 1e-33 UniRef50_A6C2C4 Putative uncharacterized protein n=2 Tax=Plancto... 147 1e-33 UniRef50_A6WMH3 Putative uncharacterized protein n=5 Tax=Gammapr... 146 2e-33 UniRef50_UPI000197320E hypothetical protein ClM62_07685 n=1 Tax=... 146 3e-33 UniRef50_A6GL94 Putative uncharacterized protein n=1 Tax=Limnoba... 146 3e-33 UniRef50_Q47H18 Putative uncharacterized protein n=3 Tax=Proteob... 145 5e-33 UniRef50_C5DA37 ATP-dependent OLD family endonuclease n=1 Tax=Ge... 145 6e-33 UniRef50_UPI0001C3721E hypothetical protein RflaF_16820 n=1 Tax=... 144 9e-33 Sequences not found previously or not previously below threshold: >UniRef50_P75828 Uncharacterized protein ybjD n=176 Tax=Enterobacteriaceae RepID=YBJD_ECOLI Length = 552 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF Sbjct: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE Sbjct: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE Sbjct: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE Sbjct: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH Sbjct: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 Query: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED Sbjct: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK Sbjct: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 Query: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ Sbjct: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 Query: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF Sbjct: 481 GFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 Query: 541 SRVLWLARGRAD 552 SRVLWLARGRAD Sbjct: 541 SRVLWLARGRAD 552 >UniRef50_A0KKW1 Homology with RecF protein n=3 Tax=Aeromonadaceae RepID=A0KKW1_AERHH Length = 545 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 248/552 (44%), Positives = 346/552 (62%), Gaps = 8/552 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+ GFRGINRLSL L+ VLIGENAWGKSSLL AL LL +++ Y F DDF Sbjct: 1 MFLERIEVKGFRGINRLSLGLDNTTVLIGENAWGKSSLLRALWCLLGQDAEPYQFSSDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRH-RVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 P HL ++LTF E P RR L A W D +HRI YR E Sbjct: 61 HQPEDPELEPARHLQLVLTFSEHRPQMCLHSRRLARLGAAWVKHKDKFHRIHYRASAELQ 120 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG+V T FLD G + ++D ++ L+ + PV RLRDAR R V + Sbjct: 121 SDGTVTTTHDFLDGIGKSLPIDDAHELVCLLITMNPVFRLRDARTARNG----VETLQWG 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 +++ +L LA +L PQ + + ++++ L A+ QL++HYF+ + + R +R N Sbjct: 177 DLSEHRLSELADKLIDEPQRIGEPELKEALQAVRQLMDHYFNALAPIKNKPRS-QREIVN 235 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + R + ++ R+ ++ + G+ ATLLQA+G L++ ARP++++EDPE+RL Sbjct: 236 RPMTLRNPGNLQALLRNADNRALQLAMAGMAATLLQARGNRELEQGARPIMILEDPESRL 295 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP ML++AW LL LP Q++ TTNSG+LLS P+ + RLVR + +LG S++ Sbjct: 296 HPTMLALAWGLLEQLPGQKLLTTNSGDLLSSLPLNQIRRLVRRQQDIVCHQLGGERYSSD 355 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D R+I+FH+R NRP S+FARCWLLVEGETE W+++ELA+ CG+ AEG+++IEFAQ G Sbjct: 356 DLRKIAFHVRINRPMSMFARCWLLVEGETEIWLLSELAQICGYSLRAEGVRIIEFAQCGQ 415 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 PL+K AR GIEWH+L DGDEAG KYA + RSLL +R ER+ LT LPA D+EH++Y Sbjct: 416 SPLIKVARDFGIEWHLLTDGDEAGVKYATSARSLLKGER--ERDRLTQLPAADIEHYLYH 473 Query: 480 QGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 GF VF R A + +N +II+KAIH SKP +A+ V EA R G + +P +L++M Sbjct: 474 NGFEAVFRREAGVGGRSTLNAGRIINKAIHHRSKPGMALAVVEEAERLGGEHIPPVLRQM 533 Query: 540 FSRVLWLARGRA 551 F+RV+ LARG+ Sbjct: 534 FARVVALARGQG 545 >UniRef50_Q5E0I1 Conserved protein with nucleoside triphosphate hydrolase domain n=8 Tax=Vibrionaceae RepID=Q5E0I1_VIBF1 Length = 544 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 228/554 (41%), Positives = 341/554 (61%), Gaps = 13/554 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 1 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFTLKDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC-TDGYHRIFYRLEGESA 119 ++ H+ II+T++ + H+ RYR L + W RI+YR+ + Sbjct: 61 HQDHSISYTQDQHIQIIITWQTTEKNEHKAGRYRKLSSLWQHDANSNTQRIYYRVSA-TN 119 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + + SFLDKDG+ + I L++L PV+R+RD+R R+ G + Sbjct: 120 NDGKITSSSSFLDKDGNVLRYHRIECLVYELIKLHPVIRIRDSR---RLSPGPFTDHVPD 176 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + R+++ R L + P +S G+I+ L +M L++HYFS + R + + + Sbjct: 177 DRIERRINNTCRRLLTAPGQVSSGEIKSALQSMQSLVDHYFS----FRNHRRHGQHKVRD 232 Query: 240 EQRSWRYLDI--INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + + + +N+ +++ + +++LLGL T L+AKG L + ARP++++EDPE Sbjct: 233 DLFFGQKAEGVSLNQFVNQNQSKQTKLLLLGLLNTYLRAKGPNTLKQSARPVMIVEDPEG 292 Query: 298 RLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES +++ L P+ LS Sbjct: 293 RLHPTQLIQAWTLLNHIPMQKILTTNSSELLSAVPLSSIRRLVRESDSTSSYALTPTSLS 352 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 +D RRI+FHIRF R ++LFARCWLLVEGETE W+ NE+AR G++ AEG+++IEFAQS Sbjct: 353 RDDLRRITFHIRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGVQIIEFAQS 412 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GLK L+K A+ + IEWHV+ DGD AGKKYA V++ L N+ ER LT LP D+EH++ Sbjct: 413 GLKSLIKMAKALHIEWHVVTDGDPAGKKYAFAVKNQLENEH--ERHRLTELPHKDIEHYL 470 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 Y GF ++F ++ I + P+ +KII K + + +KPD+A+ + G +S+P LL+ Sbjct: 471 YHHGFEELFRTLSNISADQPVPPKKIIVKTLKKYAKPDVALAIVEHCEEMGPESIPLLLR 530 Query: 538 KMFSRVLWLARGRA 551 R + +A+G+ Sbjct: 531 WTLKRTVTMAKGQG 544 >UniRef50_B6ER73 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=B6ER73_ALISL Length = 554 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 235/554 (42%), Positives = 339/554 (61%), Gaps = 13/554 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+LER+E+ GFRGI RLSL EQ LIGEN WGKSSLLDAL++ L +L+ F DF Sbjct: 11 MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISGELHQFSLTDF 70 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG-YHRIFYRLEGESA 119 ++ H+ II+TF+ + +R RYR L + W P + RI+YR+ + Sbjct: 71 HQDHSISYTQDQHIQIIITFQTTEKNEYRAGRYRKLASLWQPDENSHAQRIYYRISA-TN 129 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + SFLD G + I+ L+RL PV+R+RDAR R +G +P+ Sbjct: 130 NDGKITASHSFLDNKGRILRYHKIHMLVYELIRLHPVIRIRDAR--RLHPDGDTAPLPDD 187 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + R+++ R L + P +S G+I+ L +M L+EHYF A + R + R + Sbjct: 188 RI-ERRINNTCRRLLTSPGQVSSGEIKSALHSMQALVEHYF----AFKNHNRHTQHRIHD 242 Query: 240 EQRSWRYLDIIN--RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + + + I+ + I++ + +++LLGL T L+AKG L ARPL+++EDPE Sbjct: 243 DLFFGQKTEGISLTQFINQNKSKQTKLLLLGLLNTYLRAKGPNVLKPSARPLMIVEDPEG 302 Query: 298 RLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 RLHP L AW LLN +P+Q+I TTNS ELLS P+ + RLVRES + + + P+ LS Sbjct: 303 RLHPTQLIQAWTLLNHIPMQKILTTNSSELLSTVPLCSIRRLVRESDSTSCYSVSPTCLS 362 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 +D RRI+FH+RF R ++LFARCWLLVEGETE W+ NE+AR G++ AEGI++IEFAQS Sbjct: 363 KDDLRRITFHVRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLAAEGIQIIEFAQS 422 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GLK L+K A+ + IEWHV+ DGD AGKKYA V+S L+N+ +R LT LP D+EH++ Sbjct: 423 GLKSLIKIAKTLHIEWHVVTDGDPAGKKYAFAVKSQLDNEH--QRHRLTELPHKDIEHYL 480 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 Y GF +F ++ + P+ +KII K + + +KPDLA+ + G +S+P LL+ Sbjct: 481 YHHGFEPLFRELSNTSVDQPVPPKKIIIKTLKKYAKPDLALAIVQYCEDNGPESIPLLLR 540 Query: 538 KMFSRVLWLARGRA 551 R L +A+G+ Sbjct: 541 WTLKRTLTMAKGQG 554 >UniRef50_D0Z2F9 Hypothetical ATP-dependent endonuclease of the OLD family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F9_LISDA Length = 566 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 226/571 (39%), Positives = 345/571 (60%), Gaps = 29/571 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ +VLIGENAWGKSSLLDAL++ LSP++ Y+F+ DF Sbjct: 1 MHLERIEISGFRGIKRLSLTFDELSVLIGENAWGKSSLLDALSIALSPDAQFYNFKFSDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 N + L IIL ++E G H RRY+ E W ++Y++E E Sbjct: 61 HVDYTLGNKKMTQLQIILHWKEDAEGEHIARRYKGFERFWVLKH-NIRHLYYQIES-VIE 118 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP------ 174 + V+T R FL+ G I ++ + + + L PV+RLRDAR +R + P Sbjct: 119 NDKVITYRRFLNHHGREIHCDENDRMIKRWMVLHPVVRLRDARRLRYYDDENKPLHDSND 178 Query: 175 ----------------NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 N ++LD R L + P +++ G+++ + A+ L++H Sbjct: 179 HEQLQTNGHSDNHVNGNAQQEARIQKRLDNTCRRLMTQPGHVNSGELKSSIKALHSLVDH 238 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 YF+ + R RA + ++I + + +++LLGL ++A+G Sbjct: 239 YFAFAPHQRQRNFN---RAHFPSFAQYAEHPFEQLIPKNLSKQNQLVLLGLLNAFIRARG 295 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 + L + +RP+L++EDPE RLHP +L AW ++ +P+Q+I TTNS ELLS P++ + + Sbjct: 296 PVSLKRLSRPILIVEDPEGRLHPTILQQAWSFISSMPMQKILTTNSPELLSSVPLQSIKK 355 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L+R++ R + +G L +++RR+SFH+R +RPS+LFAR WLLVEGETE W+ NELAR Sbjct: 356 LIRQADRTQVFEVGKRTLGKDETRRVSFHVRLHRPSALFARAWLLVEGETEVWLFNELAR 415 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDR 458 CG++ AEG+++IEFAQSGL+PLVK AR +GIEWH++ DGD AG+KYA TVR++L D Sbjct: 416 YCGYNLAAEGVQIIEFAQSGLRPLVKIARSLGIEWHLISDGDMAGRKYAETVRNMLGTD- 474 Query: 459 EAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAI 518 AER LT LP D+EH++Y QG+ +F +++ I + P+N KII +A+ R +KPD+A+ Sbjct: 475 -AERHRLTVLPDRDIEHYLYNQGYEALFKQLSGIQGDAPINAHKIIQRALKRHAKPDVAL 533 Query: 519 EVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 + VD VP L++ + R++ ++RG Sbjct: 534 AIVEYTHEGKVDEVPLLIRWLLKRIVAMSRG 564 >UniRef50_B7VSG7 Predicted ATP-dependent endonuclease n=54 Tax=Gammaproteobacteria RepID=B7VSG7_VIBSL Length = 590 Score = 403 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 233/593 (39%), Positives = 333/593 (56%), Gaps = 49/593 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI R+SL ++ LIGEN WGKSSLLDAL+++L + YHFE DF Sbjct: 1 MQLERIEISGFRGIKRMSLAFDELTTLIGENTWGKSSLLDALSVVLPSDGVPYHFEMTDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + HL I+L + + RYR L+ W G RI+YR+ E Sbjct: 61 HVDYSVSHPQSQHLQIVLALKANDKSELNAGRYRKLKPVWVQDEFGVFRIYYRISATL-E 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN----- 175 T +FL DG+P+ + ++ L+ L PV+RLRDAR R NG N Sbjct: 120 QYETTTHYAFLGLDGNPLKLHHSEKLSQELMTLHPVIRLRDARHFDRPFNGNSLNHNAHL 179 Query: 176 ---------------------------------------VPNVEVTARQLDFLARELSSH 196 +++D R L + Sbjct: 180 PGNVHTNTVHASNGHANNVSGNGNGQSQTTNGNGSNGNGNGRQARIEKRIDNTCRRLMAI 239 Query: 197 PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR 256 P +++ G++R L +M L+EHYFS + + R R + I+++++ Sbjct: 240 PGHVNKGEMRSSLESMQSLIEHYFSFKSVSRKNPRKPRD--GLLYSAGANDKSIHQLVEE 297 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL 316 + R++ +GL LQAKG L + ARPLL++EDPE RLHP L+ AW L+ LP+ Sbjct: 298 TKNKQTRLLFMGLLNAYLQAKGPNDLRRCARPLLILEDPEGRLHPTHLARAWSLMQKLPM 357 Query: 317 QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSL 376 Q+I TTNSG+LL+ P++ + RLVR+S + A +L + S ++ RRI FHIRF+R +L Sbjct: 358 QKILTTNSGDLLAAVPLQSIRRLVRQSDKTIANQLNVNHFSKDELRRIGFHIRFHRSGAL 417 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVL 436 +ARCWLLVEGETE W+ NELA QCG++ AEG+++IEFAQSGLK L+K A+ GI+WHV+ Sbjct: 418 YARCWLLVEGETEVWLFNELANQCGYNLAAEGVQIIEFAQSGLKALIKVAQEFGIDWHVV 477 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 DGD AGKKYAATV S L ND+ ER LT LP D+EH++Y GF + F M +IP + Sbjct: 478 TDGDAAGKKYAATVLSKLGNDQ--ERHRLTELPDRDIEHYLYMNGFENFFRDMVKIPYDH 535 Query: 497 PMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 P+ +K+++K + + +KPDLA+ + +G D +P LL+ RV+ +A G Sbjct: 536 PIPAKKVVAKVLKKHAKPDLALAIVSHCENQGQDCIPLLLRWTLKRVITMANG 588 >UniRef50_A1SRF4 ATP-dependent endonuclease of the OLD family protein n=2 Tax=Psychromonas RepID=A1SRF4_PSYIN Length = 558 Score = 370 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 206/559 (36%), Positives = 314/559 (56%), Gaps = 10/559 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M+L+++E+VGFRGINRLS+ ++ + +GEN+WGKSSL DAL+L LS Y F DDF Sbjct: 1 MLLDQIEVVGFRGINRLSINVKSLSAFLGENSWGKSSLFDALSLFLSGTKKAYKFTGDDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P +H++ TF+E G R+Y+ + A W I+Y+++G E Sbjct: 61 HRPSISDVSCNKLIHLVFTFKEQANGESLQRQYKSISAAWNLPKGECSYIYYQVDGSITE 120 Query: 121 DGSVMTLRSFLDKDGHPIDVED--INDQARHLVRLMPVLRLRDARFMR--RIRNGTVPNV 176 G+++T R FLD G + + + + +P LR+ R + G V Sbjct: 121 SGNIITQRYFLDNHGQKKSFKKDVLANLVNEFISFVPALRMGSERSLMVTAEDTGDVEYC 180 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG--AGQARYRLMR 234 ++ + + L+ Q LS+ +++ G A+V L +HY + + R Sbjct: 181 SKRASCEARIKRIFKRLNKSSQQLSESEMKMGYQALVYLFDHYLLKHYGRSHFHRGDAQN 240 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 S++ L N ++ G +S R +LL + L+ +G L + A P+LL+E+ Sbjct: 241 DTKGQMPFSFQALTHFNDLLKT-GHKSDRAMLLLVLGEFLEVRGEHLLRRGATPILLLEE 299 Query: 295 PETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 PE LHP+ L++ W +LLP+Q++ +TNS +LLS P+ V RLVR + ++ L Sbjct: 300 PENNLHPVNLAITWRFFSLLPMQKLVSTNSSQLLSFLPLSCVQRLVRCTGLTQSYSLNLK 359 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF 414 S D RR++FHIR RP SLFAR WLLVEGETETW++ EL+R CG++ EG++++EF Sbjct: 360 HFSQNDLRRVAFHIRMTRPQSLFARSWLLVEGETETWLLTELSRLCGYNLVVEGVQILEF 419 Query: 415 AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDME 474 AQ G+ PL+K A+ + IEW VL DGD AG+KYAA V +L + LPALD+E Sbjct: 420 AQCGVAPLIKLAQDLHIEWFVLTDGDAAGQKYAARVAEMLLVKDSLVNRLV-VLPALDIE 478 Query: 475 HFMYRQGFSDVFHRMAQIPENV--PMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSV 532 H + GF++V+ A E + KII KA+H+ SKP+L + +A RG DS+ Sbjct: 479 HLFFDHGFANVYLEAAHYTEKDLARITTHKIIDKAVHKYSKPELGLAIANAVEERGTDSI 538 Query: 533 PTLLKKMFSRVLWLARGRA 551 P LLK++FSR++ LAR ++ Sbjct: 539 PPLLKRLFSRLVGLARSQS 557 >UniRef50_Q1Q554 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q554_9BACT Length = 574 Score = 370 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 142/575 (24%), Positives = 253/575 (44%), Gaps = 27/575 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY---HFER 57 M L ++I FRG+ L L L+ VLIGEN GKS++L+A+ L+L+ + F Sbjct: 1 MKLIEIKIENFRGVRSLHLPLDGLTVLIGENNTGKSTVLEAIRLVLTRGFGVRRGGQFTE 60 Query: 58 DDFWFPPGDINGRE-HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DF + + + I L F E + + T G + I+ + +G Sbjct: 61 YDFHLKDANATPQTADQISITLHFAEEQENEWPDAVIQQMSEVIQLGTTGLNHIWLQAKG 120 Query: 117 ESA-EDGSVMTLRSFLDKDGHPIDVEDIN--DQARHLVRLMPVLRLRDARFMRRIR---- 169 E GS T +FL+ G + +++ + V L + LRDA R Sbjct: 121 GYQAESGSFETKWAFLNSSGAELVLKNATPLNLISRFVPLFFLSALRDASQEFGQRGQFW 180 Query: 170 NGTVPNVPNVEVTARQLDFLARELSS--HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 +G + ++ + +++ + RE+++ N ++ + ++ +L+ ++ + Sbjct: 181 SGFLKSIQLPDDQRERIEEMLREVNTSVIGANAGLTEVTKKIADAGRLVPLDLADPVVLE 240 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 A + Q + + + R G + + +L LF A T ++ Sbjct: 241 AIPTRVFDMVGKIQVHLKSSYGVKLPLHRHGEGTQSLAVLMLFQAFTSANLTEAYYPEST 300 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 P+L +E+PE LHP + L + Q + +++SG+L+S PV + RL + + Sbjct: 301 PILALEEPEAHLHPSAIRSLGSFLEKMTGQILVSSHSGDLVSRVPVMALRRLYKHNGETK 360 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 R+ + + + I + IR + LF+RCWLLVEGE++ ++ L GH D Sbjct: 361 IGRMESGAFTGRELQAIDYSIRLAKGHYLFSRCWLLVEGESDYHLMPLLFEVMGHSQDQV 420 Query: 408 GIKVIEFAQSGLK--PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 V+E +Q K P +KFA+ +GI+W ++ DGD G+ Y + L N + Sbjct: 421 SFSVLEISQVIDKGEPFIKFAKALGIQWFMMADGDSEGRGYNKRAKKYLENGESL-ADRA 479 Query: 466 TALPALDMEHFMYRQGFSDVFHRMA----------QIPENVPMNLRKIISKAIHRSS-KP 514 L D+EH + G+SD M Q + + +I AI ++ KP Sbjct: 480 RTLTCADIEHEFWHSGYSDFMMNMVLPQTQSLIDTQAANDTAKKTKLLIKAAIKKAGEKP 539 Query: 515 DLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 A +A E +RG ++P +K + +RV+ LA G Sbjct: 540 AFAQALAAEVRQRGAGTIPQTIKDIITRVVQLAGG 574 >UniRef50_Q1IJ67 ATP-dependent endonuclease of the OLD family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ67_ACIBL Length = 566 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 173/554 (31%), Positives = 268/554 (48%), Gaps = 12/554 (2%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L V + FRGI R + ++ VLIGEN GKS +++AL L+L+ S + FE F Sbjct: 1 MQLHSVLVENFRGIRRAEVSFSRDTVLIGENDSGKSRVIEALCLVLNSSSGIIPFEPCHF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 P + N + I +TF E G Y+P+++ P + + + SA+ Sbjct: 61 CVPVEEANQFSVPIRITITFAERHKGEWSSATYQPIQSLLAPESSRQRELRLEVHAASAD 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + +R F G + + + + P++RL + RNG V N ++ Sbjct: 121 --AKPRIRFF--SSGGALAGSESPELLAWVRANNPIIRLEQGLLNQGGRNGPVRN-KEIQ 175 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQL--LEHYFSEQGAGQARYRLMRRRAS 238 + +D L + + G A L L + A + + L S Sbjct: 176 SYSDLVDRHYAALVGGASTNATLDLEAGFKAAQTLVALSSQHLDANARRTNWLLEEIAGS 235 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + S R+ N P + I L LF L + DA P+++ EDPE Sbjct: 236 TLKLSSRFA---NDSTSAPPSGNSYKIGLLLFVGALLRAHSQPFGPDAEPIVIFEDPEAH 292 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 LHP+ L+ W L+ + Q I +T+SG LL+ P+ + RL+R + + R+ L+ Sbjct: 293 LHPLTLASVWSLIERMRWQTIVSTHSGVLLTEAPLHSIRRLIRVNDEIIVHRVRDRALTK 352 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 D R+ +H+R R +++FARCWLLVEGETE W++ ELAR G++FDAEGI +EFAQ G Sbjct: 353 TDMRKFRYHVRSRRGAAMFARCWLLVEGETEFWLLPELARLLGYNFDAEGISCVEFAQCG 412 Query: 419 LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 + PLVK AR +GIEWH+L DGD +G Y+AT + R +T L D+EH + Sbjct: 413 IPPLVKAARELGIEWHLLTDGDNSGAIYSATAGRFCGPNELPTR--ITRLREPDIEHCFW 470 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 G+++ ++A + N R II AI +SSKP LA+++ G VP LK+ Sbjct: 471 HSGYANAILKLAGRTSSSRPNPRWIIRAAIDKSSKPYLALQLLEAVASSGSAGVPPALKR 530 Query: 539 MFSRVLWLARGRAD 552 + + +AR + Sbjct: 531 VIESCVRMARRTNE 544 >UniRef50_A3YTS5 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS5_9SYNE Length = 568 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 162/569 (28%), Positives = 259/569 (45%), Gaps = 23/569 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L ++ I FRGI L + L VLIGEN GK+S+L+A+ LS + F Sbjct: 1 MQLTKIAIKNFRGIEELEIDLAPCTVLIGENNTGKTSILEAIYTCLSRNLARKVVPFGDY 60 Query: 59 DFWFPP-GDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF + + TF ES G + + + D I +R+ Sbjct: 61 DFHLTAAMPDPSSSPPIELNFTFVESEEGEWPDAIVQAFDKAYQARADNRLEIRFRVVAA 120 Query: 118 SAE-DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRL---RDARFMRRIRNGTV 173 +F D + + R L +L PV L RDA + R+ Sbjct: 121 YDPASKDFFLDWTFRDLADNELTGAKSPQLVRELQQLNPVFFLAAVRDAGHHFQGRSQFW 180 Query: 174 PNV-PNVEVTARQLDFLARELSSHPQNLSDG-----QIRQGLSAMVQLLEHYFSEQGAGQ 227 + N ++ L ++ + Q + D +++ ++ +L+ ++ + + Sbjct: 181 GSFTKNPQIDDATRAELEEQIEAINQIILDSHTPFDEVKTQVAKTGRLVPLASTDLVSVE 240 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 A + + Q I + G + + +L LF L ++ D D+ Sbjct: 241 AIPARIFDMLNKTQVKLAARGGAKLPITQHGAGTQSLSVLFLFEAFLNSRLAEAYDPDSE 300 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 PLL +E+PE+ LHP + W +L+ + Q+I T+SGEL++ P+ + RL R++ +V Sbjct: 301 PLLTLEEPESHLHPSAVRSLWQVLSGIRGQKIIATHSGELIAAVPLHSIRRLARKAGKVE 360 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 +++ LS +D R+I++H+R R + LFA+ WLLVEGE+E W + E AR + E Sbjct: 361 VFQVNEGTLSPDDERKINYHVRAKRGNLLFAKSWLLVEGESEFWFLPEAARLLDLDLELE 420 Query: 408 GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 G+ +EFAQ GL PL+K A +GIEWHV DGD AG++YA R LL E + LT Sbjct: 421 GVCCVEFAQCGLAPLIKLATELGIEWHVFADGDPAGQRYATVARGLLGAT--PEAQRLTL 478 Query: 468 LPALDMEHFMYRQGFSDVFHRMAQIPE--------NVPMNLRKIISKAIHRSSKPDLAIE 519 L D+EH M+ G+S V+ P+ P + I AI +SKP LAIE Sbjct: 479 LAEKDIEHAMWSHGYSAVYDSAVGAPQRANITAIPGTPDYTEQTIRMAISSTSKPHLAIE 538 Query: 520 VAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 A + G +P ++ + + AR Sbjct: 539 AVEAARQAGSPGLPAAIETAITTAVNNAR 567 >UniRef50_C5S1H4 ATP-dependent endonuclease n=2 Tax=Actinobacillus minor RepID=C5S1H4_9PAST Length = 519 Score = 341 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 205/549 (37%), Positives = 291/549 (53%), Gaps = 34/549 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ VEI GFRGIN L L L N VLIGEN WGKSSLL AL+ + S +LY F +DF Sbjct: 1 MYLKFVEIHGFRGINSLFLKLRPNMVLIGENTWGKSSLLGALSTIFSSSDELYQFTENDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 G + + + TF E HR +P + G H + + GE Sbjct: 61 HVEFGSQPKKHPQIRLRFTFCEERENEHREAELKPCRGLFINDDKGLHYLHLEVFGER-N 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 +G V T F ++ I E+ + R+L++ PV RLRDAR + I Sbjct: 120 NGEVTTHYRFTNERHRVISCENEQEVIRYLIQRHPVYRLRDARLNKSIN----------- 168 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 +L+ P N SD Q L A+ L+++YF Q+R + N Sbjct: 169 ---------QVQLTPMPINASDQAFAQELDALALLMKYYF---LTAQSRKNALEAMQDNA 216 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 + + R+ P L F +L P++L ED +T+LH Sbjct: 217 FLWEKAKALCIRLQKEPHLAEKVREYLSAFFVR-----DKKLANIGTPIILFEDLDTQLH 271 Query: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 P M+++ W L++ L +QRI TTNS ELLS P++ +CRLVR A+++ L E+ Sbjct: 272 PRMIAILWALISQLQIQRITTTNSMELLSHIPLKEICRLVRSPDHTHAYQIEGGMLGKEN 331 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 R+++FHI NR +LFA+ W+LVEGETE W++ E+A+ D EGI+++EFAQ GL+ Sbjct: 332 LRKLTFHIHHNRGLALFAKTWILVEGETEVWILEEMAKLLNIDLDIEGIRIVEFAQCGLR 391 Query: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 PL+K+A+ MGIEW+VL DGD+AG +YA TV+SL +N LT LP D+EHF Y Sbjct: 392 PLIKYAKSMGIEWYVLTDGDDAGLRYADTVQSLEDNF----ANRLTILPYRDIEHFFYHS 447 Query: 481 GFSDVFHRMAQI-PENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 GF VF ++A+ P +II +A+H +SKPDLAI ++ E RG D +P L K++ Sbjct: 448 GFKAVFLKLARWQPNGKFYPTSQIIKRAVHFTSKPDLAIALSKEMELRGEDKIPVLFKQL 507 Query: 540 FSRVLWLAR 548 F VL L + Sbjct: 508 FENVLLLTQ 516 >UniRef50_A6VPB5 ATP-dependent endonuclease of the OLD family n=8 Tax=Pasteurellaceae RepID=A6VPB5_ACTSZ Length = 519 Score = 325 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 220/551 (39%), Positives = 322/551 (58%), Gaps = 33/551 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + ++VGFRGINRLS+ L + VLIGENAWGKSSLL AL+L+L+ ++ LY F ++DF Sbjct: 1 MYLRQCDLVGFRGINRLSIHLRPHMVLIGENAWGKSSLLAALSLILNNKNRLYRFTQEDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + ++ TF E + + +A + P DGY RI+ R+EGE + Sbjct: 61 HHE-----ESTPAIMLLFTFSERDIKEDMDDKNQSFQAVFVPHDDGYDRIYLRVEGEMRQ 115 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + V+T SFLD+ G PI +E+ + A L+ P+ R RDAR Sbjct: 116 ND-VITTYSFLDELGEPICLENTEEVALSLICRHPIYRFRDAR----------------- 157 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 L+ L+ + A+ +L+HYF + + L ++ Sbjct: 158 -----LNSEQDLLNPQNMRAKYKSEDRQFQAVGLVLQHYF---MSSRRNDVLAQKMLLEP 209 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 W L ++ + + + R R L+ TL + +R K RP+LL EDPE RLH Sbjct: 210 TALWDELKLLCQRLKQDETRELRTRLVEFLQTLFISDAPVRTSKYHRPVLLFEDPEARLH 269 Query: 301 PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 P M+++ W L+ LP+QRI TTNS EL+S ++ +CRLVR + R +++L L ED Sbjct: 270 PRMIAILWELMQYLPIQRITTTNSVELVSQAELKDICRLVRYTDRTLSYQLFRRELGKED 329 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 RR++FHI NR +LF+R W+LVEGETE W++ ELA+ + EGI+++EFAQSGL+ Sbjct: 330 LRRLTFHIHHNRSLALFSRTWILVEGETEVWILAELAKLLDINLSMEGIRIVEFAQSGLR 389 Query: 421 PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 PL+K+A+ MGIEW+VL DGDEAG+KY+ T +LL + E + +T LP LD+EHF Y + Sbjct: 390 PLIKYAKAMGIEWYVLTDGDEAGRKYSETAHNLLE-EHEMSSQRITTLPKLDIEHFFYTE 448 Query: 481 GFSDVFHRMAQIP-ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 GF +VF R+A+ + + +RKII +AI R+SKPDLAI ++ E RRG S+P L K++ Sbjct: 449 GFENVFIRLARWERQGRYLPMRKIIQRAIQRTSKPDLAIALSAEMERRGTQSIPLLFKRL 508 Query: 540 FSRVLWLARGR 550 FS+VL L R + Sbjct: 509 FSKVLNLTRTQ 519 >UniRef50_A7ZRD6 Putative uncharacterized protein n=1 Tax=Escherichia coli E24377A RepID=A7ZRD6_ECO24 Length = 607 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 104/526 (19%), Positives = 199/526 (37%), Gaps = 27/526 (5%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWF 62 +++V I GFRGI+ + + L + VL+G+N GK+S++ A+ L + S + +DF Sbjct: 5 IDKVRISGFRGISNIEITLPRVTVLLGQNNAGKTSVIKAMQLAMGDYS--RYLSDEDFHI 62 Query: 63 PPGDINGREHHLHIILTF----RESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 + R+ + + L F E+ + DG + R + Sbjct: 63 G--EDEKRQEAITVDLRFIAVDGETRIKEFSENWQQVFGEKIQSEPDGSQFVCIRTTAKP 120 Query: 119 AE-DGSVMTLRSFLDKDGHPIDVEDINDQAR-------HLVRLMPVLRLRDARFMRRIRN 170 G + R LD ++ +D + V +P+ RD + ++ Sbjct: 121 DRVKGGYVVERFHLDIWPERMNWQDARVNNKNRLGKRLEFVPFIPIDAQRDIHSELKEKS 180 Query: 171 GTVPN-VPNVEVTARQLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYF--SEQGAG 226 V + +VE + + L R ++ + + + + + L + L F S Q Sbjct: 181 SFVGRVLSSVEYDDKDVAELERMVAEINKEAIEKSEPLKRLKNHLDNLNQSFEGSGQTEL 240 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL--LQAKGTLRLDK 284 + +R + ++ D + ++ G + + L K + Sbjct: 241 TPFPKKIRDLSKRFSVNFGESDKSSFSMEYHGMGTRSWASMLTVKAFTELLVKNHEEEAE 300 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 P++ E+PE LHP + L P Q I +T+S + L + + L ++ + Sbjct: 301 PFFPIMAAEEPEAHLHPNAQRTLYRQLVDAPGQVIISTHSPYIAGLAELHEIRFLSKQEN 360 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHH 403 V ++L +D R++ + +R LF++ +L EGETE + EL G H Sbjct: 361 SVCVYQLR-DKFDGDDLRKLRREVVHSRGELLFSKAIVLSEGETEEQALPELFEAYTGKH 419 Query: 404 FDAEGIKVIEFAQSGLK--PLVKFARRMGIEWHVLVDGDEAGKKY-AATVRSLLNNDREA 460 + GI + SG K P + A+ I + DG+E K + Sbjct: 420 PFSLGINFVGVNGSGAKYRPFLILAKDFNIPVFIFSDGEEQTVKDLKKNYEKVFGVTDIM 479 Query: 461 EREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISK 506 ++T L D E ++ QGF + + + + I K Sbjct: 480 NAANITILEGTDFEGYLLSQGFDQLIEKTIHEIDGDDAIDKWIEKK 525 >UniRef50_B0VB67 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VB67_ACIBY Length = 597 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 110/496 (22%), Positives = 192/496 (38%), Gaps = 21/496 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLL--SPESDLYHFERD 58 M L+ ++I FR + + L N VL+GEN GKS+L+ A+ L++ + + Sbjct: 1 MHLKNLKIRNFRNFESIDIPLSDNIVLLGENRTGKSNLIFAMRLVIDQNLSDSARQLKLS 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DFW + +H+ T E+ P P T I +R + E Sbjct: 61 DFWDGCDLFTKPQIEVHLDFTDFENDPD--LTALLTDYRLASDPHTVRLSYI-FRCKAEC 117 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR-RIRNGTVPNVP 177 + FL G ++ + IN+Q R + L + LRDA RN + + Sbjct: 118 TGLPTSSEDFEFL-IYGGDVEEKPINNQVRRRISLDLLDALRDAENQLGSWRNSPLRPLI 176 Query: 178 N---VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 + + L ++ +L + + + + + L + L + S G G +R Sbjct: 177 ENAMRAIDSTTLTTISADLEAANKKIVEQPQIKVLDS--SLSKQILSLSGKGHDLKPSLR 234 Query: 235 RRASNEQRSWR----YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 ++ R +R Y+D R I+ S VIL+ L + + LL Sbjct: 235 FSNADPLRLFRSLGMYIDEGKRSINEASLGSANVILMALKLEEFSWRKEKNERNYS--LL 292 Query: 291 LIEDPETRLHPIMLSVAWHLL--NLLPLQ-RIATTNSGELLSLTPVEHVCRLVRESSRVA 347 IE+PE LHP + + + Q I T++S L ++ P+ + L + ++ Sbjct: 293 CIEEPEAHLHPQLQRSVFKNIFNEKDSAQALIITSHSPTLAAVVPLRSIVNLRQINNSTK 352 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 A+ L + ++ I ++ R LF++ + VEG+ E +I A G+ D Sbjct: 353 AFSLANLPIDEDEKDDIERYLIATRSEILFSKGIIFVEGDAEEALIPSFAELLGYDLDGF 412 Query: 408 GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 GI V KP VK A +GI + ++ D D + +A E + Sbjct: 413 GITVCNIGGVNFKPYVKLASSLGIPFTIITDWDPLDGTKQPLGKKRTVEIWDAAGEVNLS 472 Query: 468 LPALDMEHFMYRQGFS 483 L E + S Sbjct: 473 TFRLTQEQREWCDNAS 488 >UniRef50_D0KM73 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0KM73_PECWW Length = 596 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 113/608 (18%), Positives = 206/608 (33%), Gaps = 80/608 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERD 58 M + RV ++ F + + + ++ V++GEN GKS+ + L L+L P + Sbjct: 1 MRISRVRLINFANFSNVDVETGESIVIVGENKVGKSNFIRGLQLILDPGLSERDRQLGFE 60 Query: 59 DFWFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEG 116 FW G+ G + + LT P R L C P R+ YR + Sbjct: 61 HFWDGLGEEKLGETIEISVDLTDFTDDP-----RLMAHLNDCVVNPGPPMVARLTYRFQP 115 Query: 117 ESAEDGSVMTLRSFLD-KDGHPIDVEDINDQARHLVRLMPVLRLRDAR-FMRRIRNGTVP 174 ++ + + +L+ + G I R ++ + LRDA + RN + Sbjct: 116 KTELNRAPESLKDYEYVIFGGTDPDMHIGGALRRMLPIDVQGALRDAEKDLSSWRNSPLR 175 Query: 175 NVPNV----------EVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQ 223 + E Q+D REL+ H ++ + I + L A+ + Sbjct: 176 PLIEELTASLDDDAREEIQTQIDEAQRELAGHDDVVATAERISERLVAIAG------DQH 229 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + R + + LD R I + +I L L + L + Sbjct: 230 AVPVSLGLAPARVDALLRSLRLLLDNGIRGIGDASLGTANLIFLALKSLELD--RLVDDG 287 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTNSGELLSLTPVE 334 + ++E+PE LHP + + + PL I TT+S + S+TP+ Sbjct: 288 ERDHTFFVVEEPEAHLHPHVQRLVYRYFLGTDGDNRDESTPLTTILTTHSPHIASVTPIR 347 Query: 335 HVCRLVRE--SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + L + A + + D + +I R F+R +LVEG+ E ++ Sbjct: 348 SIVLLRHDPEEEETIAVSTVNAPFTQRDEDDLQRYIDVTRGEIFFSRGVVLVEGDAERFL 407 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDEAGKKYAATV 450 + A G D GI V + P VK + + I +L D D ++ Sbjct: 408 VPAFADALGIPLDMLGITVCSVGGTNFTPYVKLLGPQGLDIPHVILTDRDPVNGRHPLVR 467 Query: 451 RSLLNNDREAEREHLTALPALDMEH-------------------FMYRQGFSDVFHRMAQ 491 R ++ E EH +D E ++ G ++ + + Sbjct: 468 RRFISLLELVEYEHYRDYENMDAEDVIGLANDYGYFVNENTLETELFESGLAEEMIDVIR 527 Query: 492 IP---------------ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLL 536 + + + K I R K A +A D P + Sbjct: 528 QELPQLRQEALNTLQQWLDDGEVDQGRLLKLIERIGKGRFAQALASSVSE---DVCPDYI 584 Query: 537 KKMFSRVL 544 ++ + Sbjct: 585 REALEHIR 592 >UniRef50_B0RTN2 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=B0RTN2_XANCB Length = 595 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 113/607 (18%), Positives = 207/607 (34%), Gaps = 79/607 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERD 58 M + R+ ++ F + + + ++ V++GEN GKS+ + L L+L P + Sbjct: 1 MRISRIRLINFANFSDIDIETGESIVIVGENKVGKSNFIRGLQLILDPGLSERDRQLRLE 60 Query: 59 DFWFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWT-PCTDGYHRIFYRLEG 116 FW G+ G + + LT P R L C P R+ YR + Sbjct: 61 HFWDGLGEDKVGETVEVSVDLTDFTDDP-----RLMAHLNDCVIDPGPPMVARLTYRFQP 115 Query: 117 ESAEDGSVMTLRSFLD-KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR-RIRNGTVP 174 ++ + +L+ + G I R ++ + + LRDA RN + Sbjct: 116 KTGLGHAPESLKDYEYVIFGGDDPDMRIGGALRRMLPIDVQVALRDAEKDLASWRNSPLR 175 Query: 175 NVPNV----------EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 + E Q+D REL+ H + ++ + + + L EQ Sbjct: 176 PLIEDLAASLNDDTREEIQNQVDQAQRELAGHEEVVATAE------RISERLIAIAGEQH 229 Query: 225 AGQARYRLMRRRASNEQRSWRYL-DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 A L R RS R L D R + + +I L L + L + Sbjct: 230 AVPMSLGLAPTRVDALLRSLRLLIDNGVRGVGDASLGTANLIFLALKSLELD--RLVSDG 287 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLL---------NLLPLQRIATTNSGELLSLTPVE 334 + ++E+PE LHP + + + PL I TT+S + S+ P+ Sbjct: 288 ERDHTFFVVEEPEAHLHPHVQRLIYRYFLGTGAEDGDEQPPLTTILTTHSPHIASVAPIR 347 Query: 335 HVCRLVRE--SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + L + + A + + D + +I R F+R +LVEG+ E ++ Sbjct: 348 SIVLLRHDAAEGKTVAVSTANAPFTQRDEEDLQRYIDVTRGEIFFSRGVILVEGDAERFI 407 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDEAGKKYAATV 450 + A D GI V + P VK + I +L D D + Sbjct: 408 VPAFAEVLNIPLDMLGITVCSVGGTNFTPYVKLLGPEGLNIPHVILTDRDPTNGNHPLVR 467 Query: 451 RSLLN---------NDREAEREHLTAL--------PALDMEHFMYRQGFSDVFHRMAQ-- 491 R L+N + E + + + L +E ++ G ++ + + Sbjct: 468 RRLINVLDVIEGGVDHEELDADEVIKLAEQYGYFVNENTLEPELFAGGLAEDMQEVIREE 527 Query: 492 --------------IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 ++ ++ + I R K A +A D P ++ Sbjct: 528 LPRLRRETLNALQQWVDDPAQIDEDLLLRLIERIGKGRFAQALAPSVSE---DVCPAYIR 584 Query: 538 KMFSRVL 544 + Sbjct: 585 SALEHIR 591 >UniRef50_Q13ZS1 Predicted ATP-dependent endonuclease of the OLD family n=3 Tax=Proteobacteria RepID=Q13ZS1_BURXL Length = 613 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 126/608 (20%), Positives = 213/608 (35%), Gaps = 79/608 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L R+ I FR + L ++ V++GEN GK++LL AL L+L P D Sbjct: 1 MRLSRIVIKNFRNFKHFDVRLGEHAVVLGENKVGKTNLLFALRLILDPALPDSSRRLRID 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DFW E + + + FR+ + + L R+ YR + Sbjct: 61 DFWDGLARPLKAEDVIEVSVEFRDFENNENLLA---VLADHLVRPDPMVARVTYRYQPVQ 117 Query: 119 AEDGSVMTLRSF-LDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM--RRIRNGTVPN 175 +G+ + + G I + R + + LRDA R R+ P Sbjct: 118 GLEGAPRSEADYEFILFGGGRIENAIGYELRRWMPMDLFPALRDAESDLARWSRSPLRPL 177 Query: 176 VPNV--EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + V A+ L +A E+ + ++ + + + Q+ + G A + Sbjct: 178 LDRAAKTVDAKALSAIAGEVHATTSKIAA--LPELSDVVSQVNDQLTVMVGDKHAVKTAL 235 Query: 234 RRRASNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPL 289 + +R R L D R + S V+ L L L+ + + + Sbjct: 236 GFAPTEPERLLRALQMMIDSGKRGVAEASLGSANVLYLALK--HLEHQYLVDEGERQHTF 293 Query: 290 LLIEDPETRLHPIMLSVAWH--LLNLLPLQ-------RIATTNSGELLSLTPVEHVCRLV 340 L IE+PE LHP + + + L +Q + TT+S + S+ P+ +V L Sbjct: 294 LAIEEPEAHLHPHLQRLIYRNYLQTRDEVQADTEPRSILLTTHSPNVASVAPLANVVVLR 353 Query: 341 R--ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 ++ L L+T D + +I R F++ +LVEG+ E +++ LA+ Sbjct: 354 HVVDAGHTVGRSLKGVKLNTSDREDLERYIDVTRGELFFSKGVILVEGDAEKFLLPTLAK 413 Query: 399 QCGH--HFDAEGIKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDEAGKKYAAT----- 449 FDA GI V A + P V+ + + I + VL D D + + Sbjct: 414 LNDKALDFDAMGISVCSIAGTNFAPYVQLLGQKGLDIPFVVLTDFDPKNQAVSQEDADPD 473 Query: 450 ---------------------------VRSLLNNDREAEREHLTALPALDMEHFMYRQGF 482 +S E +H L E +++ G Sbjct: 474 DNGVGNSYGKNRVVNQIMRHLLDEEVWDKSSYGEVLELAPKHGIFLNEFTFEIDLFKAGA 533 Query: 483 SDVFHRMAQ-IPENVPMNLRKI-------------ISKAIHRSSKPDLAIEVAMEAGRRG 528 D FH + N M+ R K I K +A +A Sbjct: 534 EDYFHTAIGSLTTNKKMHARFKGMSADPDSLDPSQFLKDIDSIGKGRVAQRLAAVLVEES 593 Query: 529 VDSVPTLL 536 VD PT + Sbjct: 594 VDVCPTYI 601 >UniRef50_A5GF29 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GF29_GEOUR Length = 640 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 101/543 (18%), Positives = 195/543 (35%), Gaps = 32/543 (5%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 + V I FR + + + L+ VLIG N GK+S LDA+ + L +DD Sbjct: 33 KVTDVRIANFRSLMDIEVSLDSLTVLIGANNAGKTSFLDAIYAAIGAGRKL--LGQDDIR 90 Query: 62 FPPGD-INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP---------CTDGYHRI- 110 P + I ++ ++ I + R + + P + WT TD H Sbjct: 91 VAPEEAIPPKDRNVVIDIKIR-PITDDGKFADEFPEGSFWTSLWGSGITPAETDDSHEFM 149 Query: 111 -FYRLEGESAEDGSVMTLRSFLDKD-------GHPIDVEDINDQARHLVRLMPVLRLRDA 162 F + S G + R FL + P+ + + + L + RD Sbjct: 150 AFRTILSWSFAKGDYVLERKFLKEWRPYAEWLPTPMQEKRLQSSDIEPIALHYIDAKRDL 209 Query: 163 RFMRRIRNGTVPNV-PNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEHYF 220 R + + ++ ++ + FL L+ Q++ D +I + L + ++ Sbjct: 210 DDDLRKQGSFWRKLTDDLGLSPADIIFLEEALTGINQHIVDKSEILKHLKHNLADMQSVV 269 Query: 221 SEQGAGQARY---RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + +GAG R +R + S+ + + R G + + L +F + Sbjct: 270 AAEGAGIDISPVARRLRDLSKGIDVSFSTTAAQSFPLTRHGMGTRSLASLLVFRAFASWR 329 Query: 278 GTLR--LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEH 335 + L +E+PE+ LHP + + +P QRI +T+S + Sbjct: 330 SSQAQMEGDQIHTFLALEEPESHLHPQAQRSLFSHIKTIPGQRIVSTHSPYFAGQAQLSD 389 Query: 336 VCRLVRESSRVAAWRLGPSGL-STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN 394 + ++ +L S L + ED R++ + R LF+R + EG+TE + Sbjct: 390 LRLFLKRGGNTIVTQLDISQLGTKEDLRKLQQTVVDTRGDLLFSRAVIFFEGQTEEQALP 449 Query: 395 ELARQCGH-HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 A + + G + + P + A+ + I W+VL DG+ Sbjct: 450 IWAEKYWNASIHELGFSFVRVNGTDYFPFISLAQHLEIPWYVLADGEPRPLGELNKALKK 509 Query: 454 LNNDREAEREHLTALP-ALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 + + ++ P + E +G+ + N L I++ + Sbjct: 510 IGQVVASACPNIVVFPNGNNFESQFLAEGYLPEIEKALNETHNCTDFLGDYINELQGQKR 569 Query: 513 KPD 515 K Sbjct: 570 KGG 572 >UniRef50_C5T041 Putative exonuclease n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T041_ACIDE Length = 599 Score = 262 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 117/608 (19%), Positives = 197/608 (32%), Gaps = 74/608 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L R+ I FR L + L+ + V++GEN GKS+LL AL L+ P + Sbjct: 1 MKLTRIYINNFRNFLELDVALDGSAVIVGENRVGKSNLLYALRLIFDPSLPDSARQLGQG 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF G+ E I F E + L R+ Y Sbjct: 61 DFCDGLGEPLEGEK----ITVFVELTDFEDDLDLLALLTDFRLDDAANTVRLTYEFRPIP 116 Query: 119 AEDGSVMTLRSF-LDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR--FMRRIRNGTVPN 175 DG + G + + R + + + LRDA R+ P Sbjct: 117 GLDGFPQADEDYEFICFGGEAETKKFGHDVRRRIAMDLLPALRDAEGDLAAWRRSPLRPL 176 Query: 176 VPNVE--VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + V+ +L + + + + L++ Q L ++ L + S G Q + Sbjct: 177 LERAFAGVSGEELRGVRDAVHAATEQLAEFPAVQTLEKDLRAL--FTSMSGPKQDIEPSL 234 Query: 234 RRRASNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPL 289 ++ R +R L D R I S V L L A L+ + + ++ L Sbjct: 235 GFGTTDVTRLFRNLKLLIDGGLRTIGEASLGSANVAFLTLKA--LELRQLMSENRRDHTL 292 Query: 290 LLIEDPETRLHPIMLSVAWHLLNL------LPLQR--IATTNSGELLSLTPVEHVCRLVR 341 L IE+PE LHP + + L Q + TT+S + S+ P+ + L Sbjct: 293 LAIEEPEAHLHPHLQRSVYRHLFEDLAAAPAGEQLSLLLTTHSPHIASVAPLRSLVLLRE 352 Query: 342 -ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 + L+ ++ ++ ++ R LFAR +LVEG+ E +++ A Sbjct: 353 SKDESTVGTSAATIELTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVFAASL 412 Query: 401 GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE------------------- 441 GH D GI V + + P KF +GI + ++ D D Sbjct: 413 GHDLDHLGITVCSVSGTNFTPYAKFLTALGIPFSIVTDWDPRIDRQALGFNRSWKLVQTI 472 Query: 442 ---AGKKYAATVRSLLNNDREAE------REHLTALPALDME-HFMYRQGFSDVFHRMAQ 491 K + L + + EH +E F+ + Sbjct: 473 ESARTGKEPTRLIRELKSIEDVNVFAERCEEHGVFTNVETLEVDLFRDDDFTTAILAALR 532 Query: 492 --------------IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 + + K I K A +A P + Sbjct: 533 EQPWAAPRMAWLDEWEADPSTLNVENYLKMIEAIGKGRFAQRLASRVEGVAP---PAYIA 589 Query: 538 KMFSRVLW 545 + V+ Sbjct: 590 NAIAYVVG 597 >UniRef50_Q7WXG6 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q7WXG6_RALEH Length = 656 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 100/516 (19%), Positives = 162/516 (31%), Gaps = 49/516 (9%) Query: 1 MILERVEIVGFRGINR--LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E V I GFR ++ Q ++G NA GK+++L AL L Sbjct: 1 MHIESVTIAGFRCFGPNPTAIPFSQGLTAIVGPNASGKTAVLQALMRLFGVTRAQRTIVP 60 Query: 58 DDFWFPPGDIN---GREHHLHIILTFRESLPGRHRVRRYRP-LEACWTPCTDGYHRIFYR 113 DF P + R + + L+ E + G P G R Sbjct: 61 SDFHVTPTETERLKSRTLTIDVRLSLPELVDGSATAATVAPVFRHVRIERPGGTPLCRLR 120 Query: 114 LEGESAEDGSVM-------TLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 L +DG+ + D + R L++L RDA Sbjct: 121 LRARWDDDGTAEGAVSQDLNWINTADDVVRDDQASPVAPGDRGLIQLFYTPASRDAGTQI 180 Query: 167 RIRNGTV----------------------PNVPNVEVTARQLDFLARELSSHPQNLSDGQ 204 R G + + N + + ++ LS + L DG Sbjct: 181 RATTGALAARLLRAIEWSAGTQATVHAATEQLLNAFGSENAIQAISESLSKRWEKLHDGD 240 Query: 205 I--RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSY 262 I LS M + E + G R R + D + + Sbjct: 241 IDCNPELSLMSRRFEEVVARIGVMFKRGPAGEDRGLDA-----LSDGQQSLFYFALAAAV 295 Query: 263 RVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQR 318 + A +Q T L+ A L +E+PE L P LS + L Q Sbjct: 296 FDVERAAVAGRIQGFRTEELNVPALTLFAVEEPENHLAPYYLSRILQQIRTLVETGAGQA 355 Query: 319 IATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG-PSGLSTEDSRRISFHIRFNRPSSLF 377 I +++S +L P + V R + + L P S ++ + + P F Sbjct: 356 IVSSHSPSVLGRVPPDDVRYCRRNQATGVSTVLPIPMPTSDVEAIKFVRNAFLAFPELYF 415 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLV 437 AR LLVEG++E V+ LA D + ++ + + +GI + L+ Sbjct: 416 ARFVLLVEGDSERIVLPRLAEALNLLVDPSFVAIVPLGGRHVNHFWRLLHGLGIPYATLL 475 Query: 438 DGD-EAGKKYAATVRSLLNNDREAEREHLTALPALD 472 D D +++ L L D Sbjct: 476 DLDLGRDGGGYGRLKNALQQMLALGVPREKILELSD 511 >UniRef50_B8FKF9 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKF9_DESAA Length = 671 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 101/551 (18%), Positives = 187/551 (33%), Gaps = 65/551 (11%) Query: 1 MILERVEIVGFRGI----NRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLL-SPESDLYH 54 M L ++ I FR + + L+ L+GEN GKS+++DA+ +L + + + Sbjct: 1 MYLSKITIENFRCFGERDKKFEMSLKPGLTTLVGENDAGKSAIIDAIRYVLCTTDQEWLR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + +DF + I+ F + R T G + L Sbjct: 61 IKENDFHVGAN-----PKEIRIVCKFDDLEAHHQRA-----FIEYLTHDASGAKPPVFFL 110 Query: 115 EGESAEDGSVMTLRSFLDKD---GHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG 171 + E G +M R + + G + I+ + R L+ + + LRDA G Sbjct: 111 HWTAKETGEIMKGRPYRRIELHSGEKGEGPSIDPKVRELLSVTYLRPLRDAERALSAGRG 170 Query: 172 TV-------------------PNVPNVEVTARQLDFLARELSSHPQNLSDG--QIRQGLS 210 + V N E++ + LA L + + + QI L Sbjct: 171 SRLSQVLYHTEEVKSSGKPYGEGVANEELSVTGIGELADALIKNQPGIVETRKQIDNHLE 230 Query: 211 AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLF 270 + L S+ ++ LD+ I +PG S ++ + Sbjct: 231 KLTLLGNPICSKV----EVSGAAASPDVRLRQLLEKLDLSLDEIGKPGLGSNNLLFMACE 286 Query: 271 ATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGE 326 LL + + +LLIE+PE LHP L +Q I TT+S Sbjct: 287 LLLLAQ------ENEGNRMLLIEEPEAHLHPQRQLQVMKTLQEEAEEKKIQIIVTTHSPN 340 Query: 327 LLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 L S ++ + + ++ + G + L D + + + + + FAR ++VEG Sbjct: 341 LASAIKLKGLTLI--HENKAFSMAEGETKLEKSDYQFLERFLDVTKANLFFARGVMIVEG 398 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR--------MGIEWHVLVD 438 + E +I LA+ G F G+ ++ GL+ + +R + I + D Sbjct: 399 DAENILIPTLAKLIGRDFTENGVSIVNVGGVGLRRYARIFQRVHIEKDGLLKIPVACVTD 458 Query: 439 GDEAGKKYAATVRSLLNNDREAEREHLTALPALDM-EHFMYRQGFSDVFHRMAQIPENVP 497 D A + L E + D E Q + + Sbjct: 459 LDVMPNCAPAIIDKLDKEGHVPEIKKRQWRMKHDYNEEKPLEQKYFSTEQKATGQCVRTF 518 Query: 498 MNLRKIISKAI 508 ++ + + Sbjct: 519 VSDEWTMEYNL 529 >UniRef50_Q1LBX9 Putative exonuclease n=2 Tax=Proteobacteria RepID=Q1LBX9_RALME Length = 598 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 121/608 (19%), Positives = 203/608 (33%), Gaps = 75/608 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERD 58 M L+R+ I FR ++ + L+ + V++GEN GKS+LL AL L+L P + Sbjct: 1 MKLKRIYISNFRNFEQIDVALDGSVVVVGENRVGKSNLLFALRLILDPSLPDSARQLGQG 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DFW G+ + + + F E + + + L R+ Y + Sbjct: 61 DFWDGLGEPL-EDERITV---FVELIEFANDMDLLAVLTDYRLDDDPDTVRLTYEFRPIA 116 Query: 119 AEDGSVMTLRSF-LDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR--RIRNGTVPN 175 G + G + + R V + + LRDA R+ P Sbjct: 117 GLAGFPQADEDYEFICFGGESENKRFGHDVRRRVAMDLLPALRDAEGDLAVWRRSPLRPL 176 Query: 176 VPNV--EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF-SEQGAGQARYRL 232 + EV ++ L + + Q L++ + A+ Q L F S G Q Sbjct: 177 LERAFAEVPSQDLGQVRDVVQQATQQLAEF---PTVQALQQRLRDLFVSMSGPKQDIQPA 233 Query: 233 MRRRASNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 + ++ R R L D R I S V L L A LQ + ++ Sbjct: 234 LGFGTTDVTRLIRNLKLLIDGGLRTIGDASLGSANVAFLTLKALELQQ--LMSENRRDHT 291 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNL--LPLQ-----RIATTNSGELLSLTPVEHVCRLVR 341 +L IE+PE LHP + + L Q + TT+S + S+ P+ + L Sbjct: 292 VLAIEEPEAHLHPHLQRSVYRHLFEDLAGAQGEQLSLMLTTHSPHIASVAPLRSLVLLRE 351 Query: 342 E-SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 + L+ ++ ++ ++ R LFAR +LVEG+ E +++ +A Sbjct: 352 SPQNGTVGTSSAEISLTEDEEDDLARYLDVTRAEMLFARGIILVEGDAEKFLLPVMAASM 411 Query: 401 GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREA 460 GH D GI + + + P KF +GI + ++ D D K Sbjct: 412 GHDLDHLGITICSVSGTNFTPYAKFLTALGIPFSIITDWDPRVGKKPLGFNRSWRLVESI 471 Query: 461 E-------------------REHLTALPALDM---------E-HFMYRQGFSDVFHRMAQ 491 E L D E Q F+ + Sbjct: 472 EQTLTGVAQPKLVQELVAIADYDDFCLRCEDFGIFSNFVTLEVDLFDDQDFTGEIIATLR 531 Query: 492 --------------IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLK 537 ++ + K I K A +A + P + Sbjct: 532 ESNWSEERRAWIDAWEDDPDKLNAENYLKLIDGVGKGRFAQRLASKIVGAIP---PEYIS 588 Query: 538 KMFSRVLW 545 K S V+ Sbjct: 589 KAISYVVN 596 >UniRef50_A1VV80 Transcriptional regulator, Fis family n=15 Tax=Proteobacteria RepID=A1VV80_POLNA Length = 645 Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 90/524 (17%), Positives = 161/524 (30%), Gaps = 39/524 (7%) Query: 1 MILERVEIVGFRGINRLS--LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L R+ I F+ + + E L+G N GK+ +L AL L + L R Sbjct: 1 MKLTRLRISNFQSFGPVPTPIDFEAMTFLLGPNGAGKTVVLQALARLFGFDPSLRRVRRS 60 Query: 59 DFWFPP-----GDINGREHHLHIILTFRESLPGRHRVRRYR-PLEACWTPCTDGYHRIFY 112 DF P G+ + F E L + DG R+ + Sbjct: 61 DFHISPATLAAGNAGTLNLWIEAQFEFPELLDANGQHATIPGHFSHMQLDSADGVPRVRF 120 Query: 113 RLEGESAEDGSVMTLRSFL---DKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 RL EDG + ++ D + P++ + R+ +++ + RD Sbjct: 121 RLTAILDEDGDIEEKMHYVIHVDANDEPVNPMVVPKHDRNSIQVHYLPARRDPTDHISYT 180 Query: 170 NGTV---------------------PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQG 208 ++ + + + + +++ H L G Sbjct: 181 ASSLLGRTLRAANWHAERATVAGLTQGISAALASNAGVQGIGEQMAGHWLKLHKGSYYAS 240 Query: 209 LSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG 268 S EH + ++ R D ++ S + I Sbjct: 241 PSV---SFEHNEIDNLLRHLTIGFTPGHEASMVDFSRLSDGQQSLLYVSLVLSIQGIGRR 297 Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNS 324 + A L A RL L+ +E+PE L P L L Q + T++ Sbjct: 298 VLAGQLDAFDIDRLRPAVFTLMAMEEPENSLSPHYLGRVIKALTDFAGHHDAQAVVATHA 357 Query: 325 GELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 LL P E + L +++R + T+++ + P F+R +L Sbjct: 358 PSLLRRVPPESIRYLRLDAARCTTVKTIVMPAKTDEAHKFVREAVQAFPELYFSRLVILG 417 Query: 385 EGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 EG++E V+ L R G D I + + + + I + L+D D Sbjct: 418 EGDSEEIVLPRLFRAMGLADDDTSIVIAPLGGRHVNHFWRLLSGLQIPYVTLLDLDVGRH 477 Query: 445 KYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHR 488 + A + L +E G + Sbjct: 478 QAGWGRIRYAAKQILALWQSTPNLTLEAIEALPAWNGPDQILSS 521 >UniRef50_C5T068 SMC domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T068_ACIDE Length = 674 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 110/612 (17%), Positives = 191/612 (31%), Gaps = 92/612 (15%) Query: 1 MILERVEIVGFRGINRLS----LMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYH 54 M L ++ I FR + + L+GEN GK++++DA+ L+ + Sbjct: 1 MFLSQLTIKNFRQFGAADPLFSIEFREGVTALVGENDAGKTAVIDAIRHALTTRDMEFMR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + +DF + + I G T + Sbjct: 61 VQPEDFHIR--TDGQQATEITIRARLSGLTDGEKGA-----FAEYLTYEGAEVALYVHWF 113 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTV 173 +E + G + + R L+ + LRDA R M R + Sbjct: 114 ARRLSETPGSRRWVDITVRSGPAGEGPPFDATVRQLLATAYLRPLRDAEREMSPGRGSRL 173 Query: 174 PNVPNVEVTARQLDFLAR----ELSSHPQNLSDGQIRQGLSAM---------------VQ 214 + N ++ ++ NLS + L + Sbjct: 174 SQILNNFPEIKKGQPFDPTSPPADAAQAANLSLSGLSDYLRHLVDQHEGIGGAQKAINTD 233 Query: 215 LLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 L H A R + + ++ P GRS LG L Sbjct: 234 YLAHLSLAGEALHGRISFAEGGTDTARLRQILERLELDLLAGPDGRSRGTYGLGSNNLLF 293 Query: 275 QAKGTLRL--DKDARPLLLIEDPETRLHPIMLSVAWHLLN----------LLPLQRIATT 322 A L L + D PLLLIE+PE LHP L +Q I T+ Sbjct: 294 MACELLLLGKEPDGLPLLLIEEPEAHLHPQRQLRLMEFLEAAAEPLAEGTRRQVQVIVTS 353 Query: 323 NSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 +S L S P++++ L R + A G + LS D R + + + + FAR + Sbjct: 354 HSPNLTSKIPLQNLVLLHRRGAYSMAE--GHTHLSKSDYRFLQRFLDVTKANLFFARGLI 411 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR-------MGIEWHV 435 +VEG+ E ++ LAR G G+ ++ +GL+ + +R I Sbjct: 412 VVEGDGEALLVPTLARLIGRDLTQHGVSIVNVGGTGLRRYARILQRQDPAKGVFAIPTAC 471 Query: 436 LVDGD-------------------------------------EAGKKYAATVRSLLNNDR 458 L D D A ++ + + ++ Sbjct: 472 LADMDVMPDCAPRILELVTDDADPKWTSPRRKWRIKREFGATPADRQAGLQAKRVRLSEG 531 Query: 459 EAEREHLTALPALDMEHFM-YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLA 517 + + +E+ + + +V+ + P+N K + ++K D A Sbjct: 532 DGQNVRTFVADEWTLEYDLAFAGLAEEVYIAAVLAANDDPLNDDKKTHADVKAAAKLDYA 591 Query: 518 IEVAMEAGRRGV 529 V AG R V Sbjct: 592 ALVVQAAGDREV 603 >UniRef50_B0KSV7 SMC domain protein n=4 Tax=cellular organisms RepID=B0KSV7_PSEPG Length = 574 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 105/474 (22%), Positives = 174/474 (36%), Gaps = 50/474 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFE--RD 58 M++ RV + GFR ++ LE+N ++IG N GK++L+ AL LLL E Sbjct: 1 MLITRVVLKGFRNFADATVGLERNTLIIGANNVGKTNLVYALRLLLDKSLSDAEIEPMES 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF HL I + F E + L+G Sbjct: 61 DFHISS--AGKISDHLSITIYFSEVSED----------------------AVLASLKGNI 96 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 +D S L+ D+ ++ I LV + L+ + N Sbjct: 97 TDD-SCFVLQYTADRRSLTYQIK-IGATKPSLVEIPSRYYLKHINLRYVKSRRDLEKYIN 154 Query: 179 VEVTARQLDFLARELSSHPQNLSD----GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 E RQL L+ E S ++ SD +I + L A+ + + +GA + ++ Sbjct: 155 SE--KRQLLKLSLENRSDDESKSDHRQMARIGKALEAINGRIRNLHYVKGATDSVNEELQ 212 Query: 235 RRASNEQRSWRYLDI----INRMIDRPGGR---SYRVILLG-------LFATLLQAKGTL 280 + A + LD + + ID S ++LG + L +AK Sbjct: 213 KLAHDFSEYEVKLDSGAIQVQQFIDSLRLGASTSGASVMLGGDGRNNQILMALWKAKSQR 272 Query: 281 RLDKDARPLL-LIEDPETRLHPIMLSVAWHLL-NLLPLQRIATTNSGELLSLTPVEHVCR 338 D D+ + +E+PE LHP L N LP Q T++S ++ + + Sbjct: 273 EHDPDSEVVFYCVEEPEAHLHPHQQRKLADYLINDLPGQTFITSHSPQITARYTPSSIVH 332 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L R A G S ++ + + + + FA+C LLVEG +E +ELA+ Sbjct: 333 LKVTGGRTKAASNGCSNCISKAWDHLGYRMSILPAEAFFAKCVLLVEGPSEILFYSELAK 392 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 + D I ++ VK M I W + D D + ++ Sbjct: 393 KLSIDLDFYNISILSVDGIQFSVYVKILDAMEIPWVMRTDNDVSDITVKKVLQR 446 >UniRef50_Q84GD0 Yga2G n=1 Tax=Corynebacterium glutamicum RepID=Q84GD0_CORGL Length = 645 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 82/475 (17%), Positives = 158/475 (33%), Gaps = 33/475 (6%) Query: 1 MILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + + + F+ + SL L ++G N GK+++L+AL+ L SP + Sbjct: 1 MKITVLRLSNFQSFGQGPTSLNLTDITYVLGPNGAGKTAVLEALSRLFSPVAAQRTIRIS 60 Query: 59 DFWFPPGDIN------GREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 DF P + + + F E+ + + +DG ++ Sbjct: 61 DFHIPATSGTSGIQNEEPTLWIEVDIEFPEAASEDYHASVPPNFDHMMIESSDGVPKVRI 120 Query: 113 RLEGESAEDGSVMTLRSFL---DKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 RL + A DG V ++ D+ G P +++ R + + + RD Sbjct: 121 RLTAKLAVDGVVEEKIEYIRQADELGEPTVRAEMSRYDRGHIEVHYLPARRDPSDHIAYT 180 Query: 170 NGTV----PNVPNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEH--YFSE 222 ++ + L LA +L+S + S + L+ + L +F++ Sbjct: 181 TTSLIGRTLRAVDWSQERTTLADLAEQLTSALTSNSAVSSLGLHLATEWRGLHQGGFFTD 240 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ------- 275 R L D DR ++ + L Sbjct: 241 PTIAFGRGELEGVLRQLTINFSPSHDEAAVPFDRLSDGQKSLLYISLVLAWQSLVRRVLR 300 Query: 276 ----AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL----NLLPLQRIATTNSGEL 327 + +L ++ +E+PE L P L L + +Q + T++ L Sbjct: 301 NEETSLDPNKLRPPVHTIIALEEPENSLSPQYLGRIIRQLHNACDQGDVQALIATHASTL 360 Query: 328 LSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 L E +C L ++R + + + + P F+R +L EG+ Sbjct: 361 LRRVEPESICFLRLNTARETTVHRISLPENNDTAAKYVREAIHAYPELYFSRLIVLCEGD 420 Query: 388 TETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 +E V+ + G D I V+ + + + I L+D D A Sbjct: 421 SEQVVLPRVLAAAGIAEDDASISVVPLGGRHVNYFWQLLNELKIPHVTLLDLDSA 475 >UniRef50_A6SWS1 Uncharacterized conserved protein n=5 Tax=Proteobacteria RepID=A6SWS1_JANMA Length = 605 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 100/617 (16%), Positives = 178/617 (28%), Gaps = 92/617 (14%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M L + I FR + L + NVL+G N GKS+++DAL LL+ + + Y + Sbjct: 1 MHLAELNITNFRKLRDAKLRFQAGLNVLVGANNVGKSAVVDALRALLAGQEEPYPRLDVA 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG-E 117 D P + F G R A DG I + + Sbjct: 61 DRHRPAEGEP------EGDIDFHYVFRGLDRDDE-ADFLAALKAGGDGQMEIHIHVRYFD 113 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI-RNGTVPNV 176 + + G R D + P+ + + + + + LRDA R RN + + Sbjct: 114 ADKTGRFRVKRWCGDHEDVPLLSDMMENLRG-----VYLQPLRDASQSLRPSRNSQLSRL 168 Query: 177 PNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 ++ D + L + L + SA+ EQ L Sbjct: 169 LHLLTDDAGRDGINAALQKLDEELKQHAPMISTQSAIATRHGDMLGEQLKQALTVGLSAS 228 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 I++ G +I + + + L L++E+P Sbjct: 229 DFQRLSSRLSLSVD-QFEIEQNGLGFNNLIFMAVVLSELAKNTDATYRG-----LIVEEP 282 Query: 296 ETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 E LHP + +V L L P+Q T++S S ++ + LV V Sbjct: 283 EAHLHPQLQAVLLRYLASLQAVAGEKPVQLFVTSHSPNFASNANLDCLACLVESEGHVET 342 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 + ++ ++ R FAR + VEG E +I+ LA G+ G Sbjct: 343 FFPRDVTFEKGKREKLERYLDVTRAEIFFARRVIFVEGAAELMLIDALATLAGYDLRGHG 402 Query: 409 IKVIEFAQSGLKPLVKFA--RRMGIEWHVLVDGDEAGK---------------------- 444 + +I + + I ++ D D + Sbjct: 403 VSLISVEGLNFDSFLPLFGENALKIPVALITDADPQRELEEGENDDDNDDDDAEDVAIEE 462 Query: 445 -----------------KYAATVRSLLNNDREAEREHLTALPA-LDMEHFM--------- 477 V + + E ++ +E+ + Sbjct: 463 DGVQPKRKRAKAVYPALGEEIKVSANTAKMKALEDRYVKVFHGVKTLEYDLALHANAREA 522 Query: 478 -------YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS----SKPDLAIEVAMEAGR 526 + ++ + R + RS K +A Sbjct: 523 MLTALADPHPKIAKSLRKIVDAENDNTDKARVLFRGMFERSQNNVQKGRFGQALAQVISE 582 Query: 527 RGVDSVPTLLKKMFSRV 543 V VP +K V Sbjct: 583 GVVCDVPAYIKSAVEHV 599 >UniRef50_B2PZ40 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PZ40_PROST Length = 649 Score = 235 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 87/478 (18%), Positives = 169/478 (35%), Gaps = 41/478 (8%) Query: 1 MILERVEIVGFRGINR--LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +ER+ + FR S+ ++ L+G N GK+ L+ AL + ++ R Sbjct: 1 MHIERINLQNFRSFGPGGQSIAVDPNLTTLVGANGAGKTVLMQALQRMFGISNEQRTIRR 60 Query: 58 DDFWFPPGDIN---GREHHLHIILTFRESLPGR-HRVRRYRPLEACWTPCTDGYHRIFYR 113 DF P D R L I+ F E G + R Sbjct: 61 QDFHIPSLDEEIPCKRTLMLEAIVAFPELDDEDGDHSVIPDFFHHMSVTDEGGKLKCRLR 120 Query: 114 LEGESAEDGSV----MTLRSFLDKDGHPID--VEDINDQARHLVRLMPVLRLRDA--RFM 165 L+ E +DGS+ + + G P++ ++ R ++L+ V R A + Sbjct: 121 LDAEWEDDGSIDGYITSQFRAVTTWGEPVEADFHNVRPADRSRIQLIYVPATRCAVSQVS 180 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 +++ + E A EL+ + + I + + + S Sbjct: 181 AFLKSRLWKAINWSEQVRSSFTQKATELNESFE--GENAISTVTGKLTERWQELHSAGTD 238 Query: 226 GQARYRLMRRRASNEQRSWRYL-----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 ++RL+ +R R L +R +D + + + + L + + Sbjct: 239 STPKFRLVDQRFEEFVRKVEVLLHPDESRRDRSVDELSDGQSSLFHIAMTSATLDVETEI 298 Query: 281 RLDKDAR------------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNS 324 ++ +L +E+PE L P LS ++ L Q I +++S Sbjct: 299 LAQPESEDFLGADLPLPSLTILALEEPENNLAPYYLSRIISQISSLVHGLRAQAILSSHS 358 Query: 325 GELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 +L+ V RL ES+ +L E ++ I +R P FA+ + Sbjct: 359 PSILARIQPTQVRHFRLATESNTTVVRQLTLPDEENEAAKYIQQAVRA-YPELYFAKVVV 417 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 L EG +E ++ ++ G D + ++ + + + + I + L+D D Sbjct: 418 LGEGASEEIILPAISEAMGIPIDKSFVAMVPLGGRHVNHMWRLLTDLQIPFLTLLDLD 475 >UniRef50_B3Q1T7 Putative uncharacterized protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q1T7_RHIE6 Length = 648 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 112/558 (20%), Positives = 194/558 (34%), Gaps = 69/558 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M L V I FR + L L N+++GEN GK++L+DAL LS S + +D Sbjct: 1 MYLSEVSIKDFRVLTDFRLRLNPGINLIVGENNSGKTALVDALRYALSVNSGEWTRVQDR 60 Query: 59 DFWFP---------PGDINGREHHLHIILTFRESLPGRHRVRRYRPLE---ACWTPCTDG 106 DF DI R+ + E++PG + R L T G Sbjct: 61 DFRRGARSFSIQLKFEDITARQAAAFVEHLTHETIPGTNNRRSVLYLNYQAEQTTHLVRG 120 Query: 107 YHRIFYRL-EGESAEDGSVMTL-RSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDAR 163 +I L G +AE SV R FL P+ D RL +L + Sbjct: 121 ARQIRTELRSGANAEGPSVEREARDFLATTYLRPLRDADAELMGGRGSRLAQILGSSE-- 178 Query: 164 FMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIR-----QGLSAMVQLLEH 218 R V N+ VTA +S+ + + + R + LS ++ ++ Sbjct: 179 --RFGEADVVENLLTTIVTANAAIVENDGVSATRERIEEQLRRLDFRTKPLSPLISIMGG 236 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 EQ R ++ R R +I+ G ++ + LL+ Sbjct: 237 TDLEQLDASERKQMFR------AILERLQLLIDSQERYQGLGYSNLLFMATELLLLEQ-- 288 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL------LPLQRIATTNSGELLSLTP 332 ++ PLLLIE+PE LHP + L LQ I TT+S L S P Sbjct: 289 ----EQHDFPLLLIEEPEAHLHPQLQMKFLRALREGFGGQNSSLQSILTTHSPNLASKAP 344 Query: 333 VEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 +E+V + + + R + L ++ + + + + FA+ ++VEG+ E + Sbjct: 345 LENVILMA--EGKAFSLRKDETRLDAQNYVHLEKFLDVTKSNLFFAKSVMIVEGDGENIL 402 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE------------WHVLVDGD 440 ++ A G F+ G+ V+ P + +R G++ L D D Sbjct: 403 LSTFADLLGTPFEDFGVSVVNVGSIAFAPFARIFQRAGMDDPADSGKWLRTRVVCLRDLD 462 Query: 441 EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNL 500 + ++ + +++ N + Sbjct: 463 LWPEPARIADGNIYGFQETKPGN-----------QQYWESHYAENAQGRLNWIANRKLLA 511 Query: 501 RKIISKAIHRSSKPDLAI 518 + + + + A+ Sbjct: 512 GQNVRVEVADHWTFEYAL 529 >UniRef50_B5XVI7 OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XVI7_KLEP3 Length = 583 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 112/600 (18%), Positives = 193/600 (32%), Gaps = 81/600 (13%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++I FR + +++ L VL+GEN GKS+++DA+ LL P S +D Sbjct: 1 MYLGSLKISRFRSCDDVTVSLRPDLTVLVGENNGGKSNVVDAIRLLTLPLSGRRERYPED 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF---YRLEG 116 I F + + L P + Y Sbjct: 61 ---EDVRRYSTVPSFQIEGAF------QGLSDTLKGLLISAVPDPTKSEATYGYRYESRS 111 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT--VP 174 E A G D +G + + L+R + + LRDA + +GT + Sbjct: 112 EHAPRGKTTVWAGRFDTNGPEL-------GSSELIRHVYLPPLRDAHQVLGTSSGTRVMA 164 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH-YFSEQGAGQARYRLM 233 + N R+ DFLA + + I +SA + LL + + A + Sbjct: 165 LLRNFLPKEREQDFLAGVRRADNRPEILTTINTDISAALGLLTNGVRPQIAALDFGSETL 224 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 A + + +I I G ++ + L L + L+E Sbjct: 225 LDVARDLRFRMADTGLIPEDIRSSGLGYSNLLYMATVVVELTKAKEADL-----TIFLVE 279 Query: 294 DPETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVEHVC 337 +PE LHP + + L +Q + TT+S L + H+ Sbjct: 280 EPEAHLHPQLQVLVLEFLLDQARQSASRIVEPGKPEGRIQIVVTTHSPNLTAWVSPRHLV 339 Query: 338 RLV---RESSRV-----AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 + RE + + + GL + +IS ++ R + LF +LVEG E Sbjct: 340 VMRSRHREQDGIAISESVSVPIAEIGLKPKTLDKISRYLDVTRSALLFGNRAILVEGIAE 399 Query: 390 TWVINELARQ------CGHHFDAEGIKVIEFAQSGLKPLVKFA------RRMGIEWHVLV 437 ++ LA++ +G ++ +P V+ R+ V+ Sbjct: 400 ALLLPVLAQKLVLADDLDGWLRFKGAVIVPIEGVDFRPYVEVLLRPYGDARIADRLIVIT 459 Query: 438 DGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFH---------- 487 D D L A + +EH ++ G Sbjct: 460 DADPTVLGNRKVDLENLAATHGASDALIVLTNQHTLEHEIFGAGNESFLKSVFLRLHRNS 519 Query: 488 ------RMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFS 541 ++ IPE N + +A ++ K DLA +A VP L Sbjct: 520 RRDWEAQIEGIPEQDRPNAFLKLIEA-KKTRKGDLAQAMASRIEAGEPFVVPPYLIDAIR 578 >UniRef50_Q210V4 SMC protein-like n=3 Tax=cellular organisms RepID=Q210V4_RHOPB Length = 695 Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 107/607 (17%), Positives = 190/607 (31%), Gaps = 70/607 (11%) Query: 1 MILERVEIVGFRGIN----RLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYH 54 M + + I FR L L+ L+GEN GK++++DAL L+L +L Sbjct: 1 MYISEIRIENFRLFGVGNDTFVLRLKPGLTALVGENDGGKTAVIDALRLVLGTRDQELIR 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 E DF PG + + I LTF R E + Sbjct: 61 VEATDFHQAPG--GAQAEQICIRLTF----KALTVHDRAAFAEYLTYLPGGDVTETALII 114 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVED---INDQARHLVRLMPVLRLRDARFMRRIRNG 171 + + R L + D + AR L+ + LRDA R + G Sbjct: 115 TWNARRNTKEGVSRRTLPSEIRTGAAGDGPVLEGAARALLTATYLRPLRDAE--RAMSAG 172 Query: 172 TVPNVPNVEVTARQLDFLARELS------SHPQNLS--------------DGQIRQGLSA 211 + + +++ + P LS I++ Sbjct: 173 RGSRLSQILQHTKEIKETGVAFDPKASPPADPAKLSVLGVGDYASFLFDGSAGIKEARKK 232 Query: 212 MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRV-ILLGLF 270 + S + + R + L+ + + LG Sbjct: 233 LNDEFLKPLSFANDLLNARIAVSGSRDDAVRLRQLLEKLELALSASDDTDASYTRGLGSN 292 Query: 271 ATLLQA--KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP---------LQRI 319 L A L + D PLLLIE+PE LHP L +Q + Sbjct: 293 NLLFMACELLLLAAESDGFPLLLIEEPEAHLHPQRQLRLMSFLQEQADGVRADGQQIQIL 352 Query: 320 ATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP--SGLSTEDSRRISFHIRFNRPSSLF 377 TT+S L S +E++ + A+ +GP + LS D R + + + + F Sbjct: 353 VTTHSPNLASDIRLENLVMI----EGRKAFPMGPEHTQLSASDYRFLERFLDVTKANLFF 408 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR--------M 429 AR ++VEG++ET ++ +AR F G+ ++ GL + R + Sbjct: 409 ARAVMIVEGDSETILLPVIARLLDRDFHRYGVSLVNVGGVGLGRFARIFMRKRPEESGVI 468 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL--TALPALDMEHFMYRQGFSDVFH 487 + + D D V L + + E + D + + Sbjct: 469 SVPVACVTDLDVMPDDAPWIVGKLKDGEDVPEIKKGGRQWRRKADFPGAKLDERRKERRD 528 Query: 488 RMAQIPENVPMNLRKIISKAIHRSS-KPDLAIEVAMEAGR----RGVDSVPTLLKKMFSR 542 + + + + + +P + + M G + ++++ Sbjct: 529 KASGQKVKTFVAGDWTLEFDLALHGMRPQVWLAAHMAFADDELVNGKTTKKAVIEESVPA 588 Query: 543 VLWLARG 549 L RG Sbjct: 589 FKELIRG 595 >UniRef50_B4EWQ2 Putative plasmid-related protein n=2 Tax=Gammaproteobacteria RepID=B4EWQ2_PROMH Length = 654 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 84/478 (17%), Positives = 168/478 (35%), Gaps = 41/478 (8%) Query: 1 MILERVEIVGFRGINRL--SLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +ER+ + FR S+ ++ L+G N GK+ L+ AL + ++ R Sbjct: 1 MHIERINLQNFRSFGPEGQSIAVDPDLTTLVGANGAGKTVLMQALQRMFGISNEQRTIRR 60 Query: 58 DDFWFPPGDI---NGREHHLHIILTFRESLPGR-HRVRRYRPLEACWTPCTDGYHRIFYR 113 DF P + + R L I+ F E G + R Sbjct: 61 QDFHIPSLEEEIPSKRTLTLEAIVAFPELDDEDGDHSVIPDFFHHMSVTDEGGKLKCRLR 120 Query: 114 LEGESAEDGSV----MTLRSFLDKDGHPI--DVEDINDQARHLVRLMPVLRLRDA--RFM 165 L+ E +DGS+ + + G P D +++ R ++L+ V R A + Sbjct: 121 LDAEWEDDGSIDGYITSQFRAVTTWGEPEVADFQNVRPADRSRIQLIYVPATRCAVSQVS 180 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ-----NLSDGQIRQGLSAMVQLLEHYF 220 +++ + E A EL+ + ++ G++ + + Sbjct: 181 AFLKSRLWKAINWSEQVRSSFTQKATELNESFEGEKAISIVTGKLTERWHELHSAGTDST 240 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + R+ R+ E +R ID + + + + L + + Sbjct: 241 PKFRPVDLRFEEFVRKV--EVLLHPDESGRDRSIDELSDGQSSLFHIAMTSATLDVETEI 298 Query: 281 RLDKDAR------------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNS 324 ++ +L +E+PE L P LS ++ L Q + +++S Sbjct: 299 LAQPESEDFLGADLFLPSLTILALEEPENNLAPYYLSRIISQISSLVHGLRAQAVLSSHS 358 Query: 325 GELLSLTPVEHVC--RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 +L+ V RL ES+ +L E ++ I +R P FA+ + Sbjct: 359 PSILARIQPTQVRHFRLATESNTTVVRQLTLPYEENEAAKYIQQAVRA-YPELYFAKVVV 417 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 L EG +E ++ ++ G D + ++ + + + + I + L+D D Sbjct: 418 LGEGASEEVILPAISEAMGIPIDKSFVAMVPLGGRHVNHMWRLLTDLQIPFLTLLDLD 475 >UniRef50_Q983V1 Mlr8165 protein n=3 Tax=Rhizobiales RepID=Q983V1_RHILO Length = 608 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 104/606 (17%), Positives = 181/606 (29%), Gaps = 66/606 (10%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++ I FR L + + E +IGEN GK++LL AL L L S Sbjct: 1 MHISKITIRNFRSFAHLDVRIAENTTCIIGENNTGKTNLLQALRLCLDVNLASSYRSLLP 60 Query: 58 DDFWFPPGDINGREHHLHIILT------FRESLPGRH-----RVRRYRPLEACWTPCTDG 106 D + + + I + E+L G R R D Sbjct: 61 SDIHSAVDLSHPSQVVIAIEIDQWAGKVNEEALVGGWQVAPDRARLIYRFRPKLKVRDDL 120 Query: 107 YHRIFY-------RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRL 159 + E G + +D D +D LV +P LR Sbjct: 121 ADETIEPGDLTIDDYQWEITGGGDPRHDVATVDWDQDIGVGIRFSDLQSFLVVHLPALRD 180 Query: 160 RDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGL-SAMVQLLEH 218 ++ + + + E+ + D L + L Q +++ + L A+ Sbjct: 181 VESDLRQTRSSPLTRLIAASEIDHAEKDALVQALRDANQTIAESPTIEALAEAIDASFTK 240 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLL 274 L ++ R L + + + G ++ + ++ Sbjct: 241 VSGPAFDMGVGLGLAEPSFQAIVKALRILLTNAAVTDFDPAQNGLGLNNILYVSIWIEYF 300 Query: 275 QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE 334 L +K A ++L E+PE LHP + + L LP Q I TT+S + S + Sbjct: 301 --NKRLAQEKSAGQIILFEEPEAHLHPQLQLALFGALKALPFQSILTTHSTHITSQADLS 358 Query: 335 HVCRLVRES--SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 L + L D + + + + LFAR +LVEG E ++ Sbjct: 359 SFVVLTNVGVAGTASGVPAENKDLEQNDIADLERFLDATKSNMLFARKVILVEGPAELFL 418 Query: 393 INELAR-QCGHHFDAEGIKVIEFAQSGLKPLVKFARR--MGIEWHVLVDGDEAGKKYAAT 449 I L + D EGI VI K + ++ DGD Sbjct: 419 IPPLVKEVMEIDLDREGIAVIPIYGVHFDVYAKLFTEGSLPKRCAIVADGDLKPSDAIEE 478 Query: 450 VRSLLNND----REAEREHLTALPAL-DMEHFMYRQGFSDVFHRMA-------------- 490 D E +++ E + G ++F + A Sbjct: 479 DGDDELPDPPDLDALENDYVKVFRCPTTFERAITISGTLEMFAKAADEIGAPRVATRLRR 538 Query: 491 --------QIPENVPMNLRKIISKAI----HRSSKPDLAIEVAMEAGRRGVDSVPTLLKK 538 + + L + A+ R K A + +P +K Sbjct: 539 GVRALEQEGLTADQRRELLDPLRAAVLSTAKRFGKARFAQLASSYVSDATA--LPPYIKN 596 Query: 539 MFSRVL 544 + Sbjct: 597 AVKWLR 602 >UniRef50_B5E5B1 DNA helicase associated protein n=7 Tax=Streptococcus RepID=B5E5B1_STRP4 Length = 689 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 95/518 (18%), Positives = 173/518 (33%), Gaps = 43/518 (8%) Query: 1 MILERVEIVGFRGINRLSL-MLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +V I FR + L VLIG N+ GK+++L AL+ L S + + ++ D Sbjct: 1 MKLTKVIINNFRSFGESQIIELNNQTVLIGNNSSGKTTVLQALSKLFSDKQNDRIIKKSD 60 Query: 60 FWFPPGD---INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 F P G N R + I F E + E + RLE Sbjct: 61 FHLPKGSRPGENTRNLFIETIFEFDELDGTPYSQAIPSFFEHFTVSKDGAKPFLRIRLES 120 Query: 117 ESAEDGSVM----TLRSFLDKDGHPIDVEDINDQARH---LVRLMPVLRLRDARFMRRIR 169 +DG+V T ++ D I ED + R +R++ V R Sbjct: 121 SWEDDGTVEGSIDTQFYYISSDEDTIRDEDKHRAPRKDLDKIRVLYVPASRTPEKELGNA 180 Query: 170 NG-----TVPNVPNVEVTARQLDFLARELSSHP--QNLSDGQIRQGLSAMVQLL--EHYF 220 +G V ++ E ++ EL++ +N + QI + +L ++ F Sbjct: 181 SGSMLSRLVNSINWTEDEINEITDKIDELNNTFLSENGALTQINNEIQKSWELYHEDNRF 240 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 S+ + + + G + L ++L + + Sbjct: 241 SQAELIINSSEMAAALRQIALKFSPTTTEEAFTVSDLGDGLRSIFYFSLVDSILDIELEI 300 Query: 281 RLDKDARP-------------LLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 D++ P +L IE+PE + P + L Q I T++ Sbjct: 301 TKDREENPDNPRFKLIPPVLTILAIEEPENHIAPHHIGKLIKRFKQLGNNDNSQVILTSH 360 Query: 324 SGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGLST--EDSRRISFHIRFNRPSSLFARC 380 S ++ E + L + + RV + L ++S + P FA+ Sbjct: 361 SPAIVKRIDPEDLKYLRIENNDRVLQTIVSDIQLPPAIDESYKYIKGAIQAYPELYFAKL 420 Query: 381 WLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD 440 +L EG++E ++ + G D+ I ++ + K + I L+D D Sbjct: 421 VVLGEGDSEELLLPKFFDLLGKEVDSSQISIVPLGGRHVNYFWKLLNALRIPHITLLDFD 480 Query: 441 EAGKKYAATVRSLLNN---DREAEREHLTALPALDMEH 475 ++ + E + LD Sbjct: 481 NERYGGGWGRIKYISQHLYELNTEFQEWFHTQRLDFNE 518 >UniRef50_C6BE02 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BE02_RALP1 Length = 553 Score = 225 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 91/544 (16%), Positives = 182/544 (33%), Gaps = 46/544 (8%) Query: 24 NNVLIGENAWGKSSLLDALTLLLSPESD-LYHFERDDFWFPPGDINGREHHLHIILTFRE 82 NVL+G N GK++++DAL +LLS + D D + F Sbjct: 4 LNVLVGPNNAGKTAVVDALRVLLSAGDEGALRVSSYDLHV--TDAGAQSAQATFSYVFAG 61 Query: 83 SLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFL-DKDGHPIDVE 141 L+ + + + + +D + +R + D + +PI E Sbjct: 62 LSKSE-EADFLTALKPTTNAKGETEYEAHLTVRYSNPDDSGRLRVRRWCGDHEDNPIASE 120 Query: 142 DINDQARHLVRLMPVLRLRD-ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL 200 + D +R + + LRD A+ +R R+ + + + L+ L Sbjct: 121 MLED-----LRAVYLPPLRDPAQGLRPSRSSQLARLVQRLSDDASRQEVVETLTKLDTEL 175 Query: 201 -SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGG 259 + I +A+ + + + Q + + L + + +++ G Sbjct: 176 RAKKPITDTQAAITKRHTDMLGKVLS-QKLAVGLSPSDFQRVAARLALAVADFDVEQNGL 234 Query: 260 RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----- 314 +I + + + L L++E+PE LHP + +V L + Sbjct: 235 GFNNLIYMAVVLSELSLNKEAAYR-----ALIVEEPEAHLHPQLQAVLLQYLKSVETPAV 289 Query: 315 ---PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFN 371 P+Q T++S +L ++ + + S V ++ ++ Sbjct: 290 NENPVQVFVTSHSPNFAALADIDSISCIYEASEAVGCLAPREIAFEKRKKEKLQRYLNVT 349 Query: 372 RPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA--RRM 429 R FAR +LVEG E +++ +A + G + VI + + Sbjct: 350 RAEIFFARRIILVEGTAELFLVEAMAHKLGIDLRKHSVSVISTDGLNFDAFLPLFGETAL 409 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 + V+ DGD G + E + D F F Sbjct: 410 KVPVAVVTDGDPTG------IYPQPGEHHEPSATAKSIQAQSD--------TFVRPFLAA 455 Query: 490 AQIPENVPMNL--RKIISKAIHRSSKPDLAIEVAMEAG-RRGVDSVPTLLKKMFSRVLWL 546 + ++ M R + +A+ + P +A ++A + + D L K MF R Sbjct: 456 KTLEYDLAMTATNRATMLEAL-KDLHPGIAKDLAADVEAAKDEDKAKVLFKGMFERGEGK 514 Query: 547 ARGR 550 A + Sbjct: 515 ANVQ 518 >UniRef50_B4ACT9 Possible ATP-binding nuclease n=1 Tax=Enterococcus faecalis OG1RF RepID=B4ACT9_ENTFA Length = 690 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 82/503 (16%), Positives = 171/503 (33%), Gaps = 49/503 (9%) Query: 1 MILERVEIVGFRGINRLS--LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L+++ + +R I + E +LIG N+ GK++ L AL L S + +R Sbjct: 1 MKLKKMILKNYRSIGDDEQVIDFENLTMLIGNNSVGKTAALSALNKLFSDVPNERVLKRS 60 Query: 59 DFWFP----PGDINGREHHLHIILTFRESLPGRHRV--RRYRPLEACWTPCTDGYHRIFY 112 DF P P + +E + I F E L + E+ D ++ Sbjct: 61 DFHLPKGIQPENFKKQELVIEAIFEFDELLDDQAESSPAIPFFFESFIVEGPDSLPKLRV 120 Query: 113 RLEGESAE----DGSVMTLRSFLDKDGHPIDVEDINDQARHL----VRLMPVLRLRDARF 164 RLE + DG++ + F+ +D A +RL+ V +RD Sbjct: 121 RLEASWEDGSTVDGTIESNIYFITCPETSEVTDDNKKNASRHDLNKIRLIYVPAVRDPGK 180 Query: 165 MRRIRNGTV-----PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHY 219 + +G++ ++ + T + +++ S I + +A+ + Y Sbjct: 181 QLKNVSGSMIHQVMNSINWKDETRENVKEHIDKINEDFSVESGVNILK--NAIQKEWYEY 238 Query: 220 FSEQGAGQARYRLMRRRAS-----NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 S+ +A + E ID G + + + ++L Sbjct: 239 QSDTRYTKADLKFNATTIDAAVKNTEVLFSPTETGREYSIDEMGDGMKSLFYMSIVDSIL 298 Query: 275 QAKGTLRLD------------KDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQR 318 + + + ++ +E+PE + P +L + L + Q Sbjct: 299 DVEAKINEEMVNGEDLSFTKEPPVLTIVAVEEPENHISPHILGKLVNKLRDISKKGNAQT 358 Query: 319 IATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE----DSRRISFHIRFNRPS 374 I T++S ++ E + R + + + L D + P Sbjct: 359 IITSHSPAIVKRMNPEEIRHF-RMNYGTLSTSIKKLTLPDNETNSDQYKYVKEAVKAYPE 417 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWH 434 FA+ + EG++E ++ + G D+ G+ ++ + + +GI + Sbjct: 418 IYFAKLVIFGEGDSEEILLPKFFEADGSGLDSSGVSIVPLGGRHVNHFWRLVADLGIPYI 477 Query: 435 VLVDGDEAGKKYAATVRSLLNND 457 L+D D + + Sbjct: 478 TLLDLDREREGGGWGRIKYVIKQ 500 >UniRef50_A7N6N8 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=A7N6N8_VIBHB Length = 669 Score = 222 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 83/526 (15%), Positives = 153/526 (29%), Gaps = 46/526 (8%) Query: 1 MILERVEIVGFRGINRL-SLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L +V I F+ +L + E LIG N GK+S L AL+ + D Sbjct: 1 MKLSKVRISNFQCFGKLTEIEFEEDLTALIGLNGSGKTSTLHALSRMFGVTESSRKVLVD 60 Query: 59 DFWFPPGD-INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR-------I 110 DF P + + + F E G + Sbjct: 61 DFHCPSSNTFRAEKLFIEAWFEFPELQGGDDLTAVASTFNQMCFSSEGNGKTEGGVKTLL 120 Query: 111 FYRLEGESAED-----GSVMTLRSFLDKDGHPIDVED---INDQARHLVRLMPVLRLRDA 162 RLE E D G V F+ D D + + R+ +++ + R+ Sbjct: 121 RVRLEAELTVDDVSPEGIVNETVYFILSDKDDFDASEKRVLRRSDRNNIQVHYIPASRNP 180 Query: 163 RFMRRIRNGTV--PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF 220 + + ++ + L + + + + +S + LE+ + Sbjct: 181 FKEISSSTKILLGRLLDAIQWSKGPEGELQKAVEYTEKASDEISKNAAVSLIQGHLENSW 240 Query: 221 SEQGAGQA--------RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 + AG S+ ++R ++ + + Sbjct: 241 DQMYAGDLFSKAKLNFLPLQSEDLLKTISLSFESASGAVASMERLSDGQRSLLHISIIQA 300 Query: 273 LLQAKG-------------TLRLDKDARPLLLIEDPETRLHPIML----SVAWHLLNLLP 315 + + + RL + +L +E+PE L P L L Sbjct: 301 VHEMESKTLQDMENRRHFDQKRLKRPIYTMLALEEPENHLAPHYLGRIVKSMVKLAKKTN 360 Query: 316 LQRIATTNSGELLSLTPVEHVCRLVRESS-RVAAWRLGPSGLSTEDSRRISFHIRFNRPS 374 Q TT+S L+ + + +E ++ + P Sbjct: 361 AQVAVTTHSPSLVGRIEPKQIRHFRQEKQSHTTIVSKIDLPSPEDEQYKFVSGAVKAYPE 420 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWH 434 FAR +L EGE+E VI +L CG D I V + + + I + Sbjct: 421 IYFARLVVLGEGESEQIVIPKLLSHCGVDIDDSFISVAPLGGRHVNHFWRLLEGLNIPYV 480 Query: 435 VLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ 480 L+D D + +E + P + + + Sbjct: 481 TLLDLDYGRHGGGWGRVKYVLEQQELLGKEPEIRPHNNFDDPLCNP 526 >UniRef50_C6IU32 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IU32_9BACE Length = 602 Score = 222 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 97/594 (16%), Positives = 198/594 (33%), Gaps = 62/594 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M L R+ I FR + ++L + N+LIGEN GK++++DAL + L + + + Sbjct: 10 MYLSRLHISKFRVFDDITLYFKNGINILIGENNSGKTAIIDALRICLGCGKPDNFIYVQD 69 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D P + + + L F + D + +L + Sbjct: 70 GDLHVNPENPSEINTVIQFDLIF----EFGDASIERECFYDFISQDKDNPDKQTIQLHLK 125 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 ++ + G + + + ++ + + LRDA R + Sbjct: 126 FIQENNGKKKYFKRIIWGGDNEGQQVPYESLQEIFYTYLSPLRDAVSCLRPYSYDNKTSQ 185 Query: 178 NVEVTARQ---------LDFLARELSSHPQNLSDGQ-------IRQGLSAMVQLLEHYFS 221 + + + L+ + + + + G S + + LE Sbjct: 186 LFNQLTKYDKGNESIPLNEEKKKSLAKNLYQIFENDAYDWKHILTTGKSKVNEHLEGTGI 245 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYL-----------DIINRMIDRPGGRSYRVILLGLF 270 R + R S+ R + + + G +I + Sbjct: 246 TLKHPDIEMRYVGREFSDVVRGIELKCPVYKTVEAGQEQKYFTLSQNGLGENNLIFTSVV 305 Query: 271 ATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGEL 327 L + + LL+E+PE LHP + + LN L LQ T++S + Sbjct: 306 LGDLINRC-EDHALEIYNALLVEEPEAHLHPQYQNTFFEYLNELQSKGLQVFVTSHSPTI 364 Query: 328 LSLTPVEHVCRLVRESSRVAAWR---LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLV 384 + + V ++ L R+ S + ++ L E R + + + FA LLV Sbjct: 365 TAKSDVNNISILQRKQSIIQSFSFDELSEDDYPKESKRHLRKFLDTTKAQLFFANGVLLV 424 Query: 385 EGETETWVINELARQC---GHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEWHV 435 EG E +I LA++ GI+++ R+ + + Sbjct: 425 EGVAEAIIIPILAKKFLTEKIDLCKSGIELVNIGGVAFNHFGLLFNNDDERKRLLSKCAI 484 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL-DMEHFMYRQG------FSDVFHR 488 + D D K + ++ E+ +L A +EH ++ Q DV+ + Sbjct: 485 ITDSDP---KDNGDISDRAQKAKDLEKHNLKVCLATHTLEHDLFEQSERNKAIMRDVYRK 541 Query: 489 MAQIPENVP--MNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 + +++ N+ ++ K K + A+++ VP +K Sbjct: 542 IHAQTDDLSGDFNVSTLMKKLKSNKDKAEFALQLCDRLETEVAFDVPDYIKDAI 595 >UniRef50_C7R657 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R657_KANKD Length = 661 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 95/511 (18%), Positives = 186/511 (36%), Gaps = 54/511 (10%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E++ I FR + ++ +G N GKS+L+ AL + + R Sbjct: 1 MEIEKISISNFRCFSEAEAVIFMESDITCFVGNNGTGKSALILALKRIFGSTREERTVIR 60 Query: 58 DDFWFPPGD----INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 +DF+ G+ I+GRE ++ II +F E R P + R+ R Sbjct: 61 EDFYVGSGEDYKEISGRELYIEIIFSFPELQTAVDESREVCPAFSSVIYADQDDKRLKAR 120 Query: 114 LEGESAED-----GSVMTLRSFLDKDGHPIDVEDINDQA------RHLVRLMPVLRLRDA 162 + ES D V + ++ +D ++ R ++L + RD+ Sbjct: 121 MRLESKWDENEYEDEVQSQLYWITTSNKVDFGDDAENKFPVSVYDRKHIKLRYIPAFRDS 180 Query: 163 RFMRRIRNGTVPNVPNV-----EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLE 217 + + ++ N+ + + +++ ++R+LS+ Q+L I+ S + Q+ Sbjct: 181 KSTLKNEVKSLTNLLDGYTDLNISSQEKIEAISRDLSNEIQSLES--IKTATSLLKQVWN 238 Query: 218 HYFSEQGAGQARYRLM-------RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLF 270 + + +L + + D +R I+ ++ L Sbjct: 239 NTHDKTLKHYQEPKLEAASTEIGELLRTMTVKLSPSEDGGSRDINELSDGQISLLYFTLS 298 Query: 271 ATLLQAK-----------GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL----NLLP 315 L + +L D + E+PE L P L +L N L Sbjct: 299 VVLYILEQKHHSGELRGFKSLDRDIPVFTIFAFEEPENHLSPFYLGRVIEVLSTQTNSLK 358 Query: 316 LQRIATTNSGELLSLT-PVEHVCRLVRESSRVAAWR-----LGPSGLSTEDSRRISFHIR 369 I T++S ++ VE + +E + + L PS + +D + I+ I Sbjct: 359 ATGIITSHSTSVVRRMQRVEQIRHFRQEVNSTDRYSIVNQVLLPSEKAEDDYKYINQAI- 417 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRM 429 P FA+ +L EG++E VI +LA G D + ++ + + + + Sbjct: 418 LAHPELYFAKLVILGEGDSEEIVIPKLAEALGFDLDPSFVSFVKLGGRHVNHMWRLLSDL 477 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNNDREA 460 I + LVD D + ++ E Sbjct: 478 NIPFLTLVDMDLGRSGAGPLRIKYIIDELEK 508 >UniRef50_B7GM55 ATP-dependent endonuclease of the OLD family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM55_ANOFW Length = 669 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 89/571 (15%), Positives = 175/571 (30%), Gaps = 77/571 (13%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERDD 59 + RV+I FR + + L V+IGEN GK++ L A+ L+L P + + D Sbjct: 13 YISRVKIKNFRNFRDIDISLSHKQVIIGENNVGKTNFLRAIQLILDPTLSDEDRYLTESD 72 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ + I E H L R+ YR Sbjct: 73 FFDGLENPMENGED---IEIIIEIRGYEHNKNILSVLSDATISDDPPTLRLTYRYYPIEK 129 Query: 120 EDGSV-MTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 EDG+ F + + +R++ +R ++ R+ + Sbjct: 130 EDGTKDYEYIIFQGINPDNLFKHSHRKYLN--MRVINAIRDVESELRNSRRSPINQLLKQ 187 Query: 179 VEVTARQLDFLARELSSHPQ------------------------------------NLSD 202 E+ +L +A +L ++ Sbjct: 188 YEIDKTELKEIAEKLKQRSDEVLTLDEIKDLTQKINERFKKVIGVQPDSLVSLETIDIDP 247 Query: 203 GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSY 262 +I L M+ + SE G + + + + +S Sbjct: 248 NRILNTLKLMMGDKKRPTSETSLGLNNLLYIALILLLLEDRTIPTFLKKEKFEELLQKSG 307 Query: 263 RVILLGL-------------------FATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 IL L + +L IE+PE LHP + Sbjct: 308 SNILTSSYEKNDNDNYFLKGDLSKNELKQLYSFMDMHNPINEGFTILAIEEPEAHLHPTL 367 Query: 304 LSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRR 363 + + + + + TT+S + S+ P+ + + ++ L+ + R Sbjct: 368 QRIIYRDVMVGNSSVLMTTHSPHITSVAPINSIVHMRWTNNGTQVHTTSNLSLTPTEKRD 427 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 + ++ R F + +LVEG E ++I A D +GI V + P V Sbjct: 428 LERYLDVKRGEIYFGKGVILVEGIAEEYLIPRFAELLDKPLDQKGIVVCNINSTNFAPYV 487 Query: 424 KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHF--MYRQG 481 KF +GI + V+ DGD + + + + L E++ + + Sbjct: 488 KFLDALGIPYVVITDGD------------YYILEEDGKTKIFHVLYDQSHENYGFLGHEI 535 Query: 482 FSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 S + + ++ + + ++ Sbjct: 536 ISTLLTDLQKVKRSQIPTDFQKQEDLFNKHG 566 >UniRef50_Q5WI68 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q5WI68_BACSK Length = 670 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 77/502 (15%), Positives = 165/502 (32%), Gaps = 36/502 (7%) Query: 1 MILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 MI+ ++ + FR ++ L + + +GEN+ GK++L+ L L S E+ Sbjct: 1 MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKS 60 Query: 59 DFWFPPGDINGREHHLHIILT--------FRESLPGRHRVRRYRPLEACWTPCTDGYHRI 110 DF P L + + R + + Sbjct: 61 DFHIPKQAKVETIKELQLSIEARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYL 120 Query: 111 FYRLEGESAED----GSVMTLRSFL----DKDGHPIDVEDINDQARHLVRLMPVLRLRDA 162 RL + D G + F+ D D D+ + R ++++ V +R+ Sbjct: 121 RVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVPVTPHQRSSIQVLYVPAVREP 180 Query: 163 RFMRRIRNGT-----VPNVPNVEVTARQLDFLARELSSHPQNLS-----DGQIRQGLSAM 212 R +GT + N+ + + ++ ++ I + Sbjct: 181 SSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY 240 Query: 213 VQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 + + + + + L E D+ +++ G + L L ++ Sbjct: 241 HK--DARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSS 298 Query: 273 LLQAKGTLRLDKD-ARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGEL 327 LL+A+ + + + +L +E+PE + P +L L + Q + T++S + Sbjct: 299 LLEAEIKITGKSNASLTVLAVEEPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSI 358 Query: 328 LSLTPVEHVCRLVRESSR-VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 + +++ L + + + T ++ P F+R +L EG Sbjct: 359 IKRIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEAVRAFPEIYFSRLVILGEG 418 Query: 387 ETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKY 446 ++E VI + G H D GI ++ + + K + I L+D D Sbjct: 419 DSEEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGG 478 Query: 447 AATVRSLLNNDREAEREHLTAL 468 + + L Sbjct: 479 GWSRIQYAIKQLLLYGRNREEL 500 >UniRef50_UPI0001850E55 ATP-dependent OLD family endonuclease n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E55 Length = 479 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 84/478 (17%), Positives = 169/478 (35%), Gaps = 29/478 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 + ++ + I FR + L N VLIG N GK++LL A+ + + DD Sbjct: 3 IRIKELRIRNFRSYKSADIDLSDNCVLIGANNVGKTTLLQAIQVAFVRGT---RVGSDDI 59 Query: 61 WFPPGDINGREHHLHIILTFRESLPG-----RHRVRRYRPLEACWTPCTDGYHRIFYR-- 113 + G+ ++ I L + + + + + F Sbjct: 60 YINNGESLPKDRKAIIDLLIVPTDEQNNEVMEFEDKWFEHFGDLRSENPTDLGQFFAMRT 119 Query: 114 ------LEGESAEDGSVMTLRSFLDK--DGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 ++GE + + ++ + I D+ + + + RD Sbjct: 120 VIAFDIVKGEYQVEKKALIEWPKTEEVESYSKYNRNRITDRVLQSIPIFYMDAKRDIASE 179 Query: 166 RRIRNGTV-PNVPNVEVTARQLDFLARELSSHPQNLSD-----GQIRQGLSAMVQLLEHY 219 + R V +V + +++ + L + + + + LS + + + Sbjct: 180 MKDRYSYWGKLVKDVGLDEGEIEKIEGVLDEINDTIIERSSVLNHLTKYLSKISKTVN-T 238 Query: 220 FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 E R +R +++ D + I G + I + K Sbjct: 239 KEESIKINPVSRKIRDLNRGIDITFKDQDSESFPISNHGMGTRSWITFLTLVAYIAWKNK 298 Query: 280 L--RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVC 337 + PL+L+E+PE LHP ++ +N + Q+I +T+S ++ ++ + Sbjct: 299 QMKDEEIPYHPLILLEEPEAHLHPQAQRKIFNQINGIAGQKIVSTHSPMIVGQVDIDDIR 358 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 + +E + + L E+ R+I I R LFA +L EGETE + Sbjct: 359 HISKEEGMSKINYVDTTELDYEEIRKIRQEIFKTRGDLLFANAIILCEGETEEQALPVFF 418 Query: 398 RQC-GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 ++ GI VI G KP ++ A+ I +++L DG++ K Sbjct: 419 KEYFECETFEAGINVISVGGKGKYKPFLRIAKDFNINFYLLSDGEKETIKKVQKGYKK 476 >UniRef50_C2TVV6 Putative uncharacterized protein n=1 Tax=Bacillus cereus Rock1-3 RepID=C2TVV6_BACCE Length = 697 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 94/589 (15%), Positives = 191/589 (32%), Gaps = 60/589 (10%) Query: 1 MILERVEIVGFRGINR-------LSLML-EQNNVLIGENAWGKSSLLDALTLLLSP-ESD 51 M L+ ++I FR L L + N+LIGEN GKS+++DA+ L S+ Sbjct: 1 MFLKEIKIWNFRKFGEGEANSPGLQLEFHKNFNLLIGENDSGKSAIIDAIHFTLGTVSSE 60 Query: 52 LYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 DF+ + E + I T + + + Sbjct: 61 NLKITEGDFYVDEQGNSSSEMKIECIFTDLTETEA-------GIFLEWLSFNEVNEYELI 113 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-----MR 166 RL + ++ V K G + A+ L++ + LRDA+ + Sbjct: 114 IRLTAKKIKNEIVGEKIEKFVKAGPANADVRLEGSAKELIKATYLKPLRDAKNELRPGFK 173 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSD-----GQIRQGLSAMVQLLEHYFS 221 + + + + L + Q + + + + + L+ +F+ Sbjct: 174 SRLAQILKSYSAFKTPSEGSHELENIVGETNQQIEGYFTKPIEDKTIIGEISNYLDEFFN 233 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 G+ Y+ A + ++ G S ++ + LL Sbjct: 234 LPTTGKETYKPKFEVAPAKLSDILKKLSLDLDDQVSGLGSLNLLFIAAELLLL-----ND 288 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVE 334 + L LIE+ E LHP L Q I +T+S L + T +E Sbjct: 289 GIEMGSNLTLIEEIEAHLHPQAQLRLIKYLQKSLEGSSEYKGQFILSTHSTTLTASTSLE 348 Query: 335 HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN 394 H+ + ++ + L ED + + + + FA+ + VEG+ E ++ Sbjct: 349 HIILI--HDNKAYPMGPSNTSLEEEDYEFLQRFLDATKANLFFAKGVIFVEGDAENLLLP 406 Query: 395 ELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR-----------MGIEWHVLVDGD--- 440 LA G+ ++ + K K R + + ++ D D Sbjct: 407 ALAELIDRPLHRYGVSIVNIGNTAFKRYAKIFSRSKKWINDGYSTLKMPVSIITDVDVRP 466 Query: 441 ---EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVF---HRMAQIPE 494 K+ + V+S + L + +E + + F ++ E Sbjct: 467 VEFYKDKEKSKNVKSDKKVLIIVDEFDLRKIVGEKIESNDFNELIGQTFTSMTKLKGEME 526 Query: 495 NVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 + L K + S D+ ++ M+ + + +++ + V Sbjct: 527 RYSITLGKEQESMLKESLSKDINQDIVMKLRENKKSHIESDFEELEANV 575 >UniRef50_A5N298 Predicted ATP-dependent endonuclease n=2 Tax=Clostridium kluyveri RepID=A5N298_CLOK5 Length = 539 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 95/575 (16%), Positives = 180/575 (31%), Gaps = 71/575 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQN--NVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M LE + I +R I R++L L N VL G N GKS++L A+ +L Y + Sbjct: 1 MRLEAIVIKHYRSIERVALKLPPNKPLVLFGPNNAGKSNILSAINRILGERYPTYIEMLE 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 +F H+ T + GY I Sbjct: 61 SDYFKRNQNEYPTAHITAKFTKPLYYDNKGN----------------GYDVIAVSYGYNG 104 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 + +++ D G+ I + A + R+ + + Sbjct: 105 QANNNLLH-----DGSGNKIYPTNEQRSACQS---YLIDAERNIQSAFNYSSSYSLLSKF 156 Query: 179 VEVTARQLD-FLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + L ELS + + + S G + Sbjct: 157 SKKIHEALSTEHKDELSQAFNQITASFEQTDEFSGFFNRFSEALKGAVKGFVHSLAVDFS 216 Query: 237 ASNEQRSWRYL------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 A + + L R + G +V+L+ ++ +L Sbjct: 217 AYDPNNYAKSLRIYAKEGDNIRGFEEFGTGEQQVLLMAFVKAYMEVFT------GENFVL 270 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLTPVEHVCRLVRESSRVA 347 +IE+PE LHP+ + + +Q I +T+S E + ++ + R+ +E Sbjct: 271 IIEEPEAHLHPLAQRWLKEYVVDMCSCGIQVIISTHSAEFIDAEYLDGLVRVHKEGGVTK 330 Query: 348 AWRLGPSGLST---------------EDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 A +L L S + ++ +FA +LVEG TE + Sbjct: 331 AIQLSAQQLCDFCIGSGVPENCVSPENIIDFYSTKLFSDQLKGMFAETIILVEGATEYFA 390 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 + ++ G+ G +++ P + + G + + D D K Sbjct: 391 LPVYLKRSGYSLAEHGTEIVNCRGKEAIPLYWRLFKAYGYNCYAIFDCDRNASKTRDVFN 450 Query: 452 SLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS 511 + + E + E + D F F + + ++ + IS+ H S Sbjct: 451 GIF-CEEEWDTETENCIVRADY------AYFGKDFESYLRTAIDDYTSMEQTISEKYHIS 503 Query: 512 SKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 SKP A +A +P +K + ++L + Sbjct: 504 SKPGKAKAIAQHIEE-----IPHFIKDIADKLLII 533 >UniRef50_B4BQS2 SMC domain protein n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BQS2_9BACI Length = 629 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 99/626 (15%), Positives = 205/626 (32%), Gaps = 84/626 (13%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHF-ER 57 M L ++ I GFR N + L + V++GEN GKS+++DA+ L+L+ + Sbjct: 1 MHLSKLVIEGFRCFNEKAEIPLNKGLTVILGENGSGKSAIVDAIRLILNDDEFGKSMVSE 60 Query: 58 DDFWFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DFW G+ N I + F + P + +++ Sbjct: 61 RDFWHSFGESKNESSTSFRIDIEFSKLKPVEQVA-----YLPWLKTEDLSTASLHLKVQN 115 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR--IRNGTVP 174 ++ ++ + G ++ + LRDA R + Sbjct: 116 KTNQN-----KHYKKELWGGNSSSSSFEWDTYKSIQCTYLPPLRDAEHRLRDVRGSRLAR 170 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQI----RQGLSA--MVQLLEHYFSEQGAGQA 228 + +E + L + + Q L ++ + + + + L E + + Sbjct: 171 LITKIEPENSAKERLVETVKQNNQQLLKDELIVKAKTNIKSRLVETLGEKLAQDISISFS 230 Query: 229 RYRLMRRRASNEQRSWRYLDII--NRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 R R + + + +LD S L AT+L + + + Sbjct: 231 DTRFERIIENLKLLFYPFLDDSTSIDEFRELSENSLGYNNLIYLATVLAELEDVNEQEIS 290 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSLTPVEHVCRLVRE 342 +LLIE+PE LHP + + + +Q I TT+S + + ++++ + + Sbjct: 291 CKILLIEEPEAHLHPQLQTKLLEYIEKQAKLKGVQVIVTTHSPTIAASIDLDNILVVNKT 350 Query: 343 --SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 + L GL+ + + + + + LFAR +LVEG E VI ELA++ Sbjct: 351 ELNRSPVIVPLTNVGLTPKQKFFLQRWMDITKSTLLFARGIILVEGIAEALVIPELAKRV 410 Query: 401 ------------GHHFDAEGIKVIEFAQSGLKPLVKFA-------RRMGIEWHVLVDGDE 441 + + + +I + + + I + D D Sbjct: 411 LHKHLASKDRISEYSLEEYSVSIINMGGIYFESFFQLFINAEKRGEGIPIRCAGITDCDP 470 Query: 442 AG------------KKYAATVRSLLNN---------------DREAEREHLTALPALDME 474 K A +++ +NN D + + +E Sbjct: 471 DKDSTPYNGKECDCKNPALKLKTKINNSKYCRLYSNLKTFEYDLALAEGNFPIMANTLLE 530 Query: 475 HFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS-------SKPDLAIEVA-MEAGR 526 ++ + P++ + ++K + K + ++A A + Sbjct: 531 IIETDGPTKKQIKEYIRLFPDAPVSEKAKMAKYLLDKIDDSNICGKGVFSQQLAYKLANK 590 Query: 527 RGVDSVPTLLKKMFSRVLWLARGRAD 552 SVP ++K L + Sbjct: 591 EIEFSVPEYIEKAILWACKLEGDGGN 616 >UniRef50_A3VYF2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VYF2_9RHOB Length = 674 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 86/530 (16%), Positives = 170/530 (32%), Gaps = 60/530 (11%) Query: 1 MILERVEIVGFRGINRLS--LMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + + + FR + L+ IG+N GK+++L AL L S+ R Sbjct: 1 MYIRELRLKNFRCFGDHEEVISLDPEMTAFIGDNGSGKTTVLKALQRLFGSTSNERSLRR 60 Query: 58 DDFWFPPGDING----------------REHHLHIILTFRESLP--------GRHRVRRY 93 DD F G++ G RE H+ IL F E G Sbjct: 61 DDVHFGAGEVPGPANQGDDTEAMPVVSSREIHIEAILDFPELTDATEVRSDTGLDVSVET 120 Query: 94 RPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDIN-------DQ 146 +C P T RI E D + R + + + + Sbjct: 121 FHAMSCAGPGTPLQARIRLEANWEYGIDEDDIVQRIYWVTTTEEVPFGEDDIAKIPMSTA 180 Query: 147 ARHLVRLMPVLRLRD----ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL-- 200 R ++L + R+ + + + ++ +QL+ EL +L Sbjct: 181 QRRRIQLKYLPATRNNSAVVKSAMKELLVWLERFGDLTSGKQQLEIQRTELQKVFDDLPA 240 Query: 201 SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM-IDRPGG 259 +G + + +L + + + + + + I+ Sbjct: 241 VNGVVNELTKNWGKLFKGELYSEAKLNILATEIHKALRDLTLKLSPSESGAEYAIEDLSE 300 Query: 260 RSYRVILLGLFATLLQAKG-----------TLRLDKDARPLLLIEDPETRLHPIMLSVAW 308 ++ + + A+++Q + K ++ +E+PE L P LS Sbjct: 301 GQASLLYISIVASIIQLNERHIGKSVTGYRDVPELKPWLTIIALEEPENHLSPFYLSRMI 360 Query: 309 HLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS-GLSTEDSRR 363 L++ L I TT+S + E + + + ++ + T++ + Sbjct: 361 ALMSSLCTGDSAMGILTTHSAGAIRRVKPEQIRYMRHDEQNRVSYSKSINLPPKTDEKYK 420 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAEGIKVIEFAQSGLKP 421 + + P FA+ +L EG +E V+ LA+ D + + + Sbjct: 421 YIYEAVRSNPELYFAKLVVLGEGRSEEIVVPRLAKAFHPDLDLDPAFVAFVPLGGRHVNH 480 Query: 422 LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 K + I L+D D G+ A +R D+ + + L Sbjct: 481 FWKLLNDLNIPHVTLLDYD-LGRYNAGCLRLKYAVDQLSSFGIMPDLEKP 529 >UniRef50_B1JGZ0 SMC (Structural maintenance of chromosomes) family protein n=2 Tax=Gammaproteobacteria RepID=B1JGZ0_YERPY Length = 682 Score = 217 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 116/604 (19%), Positives = 200/604 (33%), Gaps = 78/604 (12%) Query: 1 MILERVEIVGFRGINR------LSLMLEQ-NNVLIGENAWGKSSLLDALT-LLLSPESDL 52 M L+ + +R L L N+L+GEN GK+ ++DA+ +LL+ + Sbjct: 1 MYLKHISARNYRAFGDSTSTPALDWELNPGLNILVGENDAGKTCIVDAIRQVLLTTSYEN 60 Query: 53 YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 DF R + L I T + + T DG + Sbjct: 61 IRLFEQDFHI---HGAIRSNTLCIEATLCGLSTDQ-----EASVLEWLTLGEDGTCSLIL 112 Query: 113 RLEGESAEDGSVMTLR-SFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR----FMRR 167 LE + R + + G ++ R LVR + LRDA R+ Sbjct: 113 HLEARFHPPQATKRSRVETIVRTGVNGSGPEVGYAVRELVRATYLRPLRDAEAELSSGRQ 172 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLS------------DGQIRQGLSAMVQL 215 R + N+ DF ++ P L I+ + Sbjct: 173 SRLSQILGAHNLIAGQEVNDFDQTMPANIPTQLVGLMAFTQHHLGQHQVIKSVEKDINDN 232 Query: 216 LEHYFSEQGA-GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 F+ G Q+R R+ A L ++ P R R LG L Sbjct: 233 YLSQFAFSGDAIQSRIRIAPNLALTPILEKFELSLLPGAHIDPDARCAR--GLGYNNALF 290 Query: 275 QAKGT-LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL--------LPLQRIATTNSG 325 A L D + LLL+E+PE LHP + LL +Q I TT+S Sbjct: 291 MATELVLLRDGEELGLLLVEEPEAHLHPQLQERVMDLLKEHSNDDQAHKRVQVIMTTHSP 350 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 L+S +E + + + ++ +G + L D + I + + FAR ++VE Sbjct: 351 SLVSTARIEDLTLVHK--AQTFPLAVGKTKLKRTDYSFLRRFIDATKANLFFARGVMMVE 408 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG------IEWHVLVDG 439 G E ++ +A CG F G+ ++ +GL + +R G I L D Sbjct: 409 GPAEAILLPAIAEMCGRSFSKHGVSLVNVGNTGLYHYARILQREGTGPDIPIPVVCLTDR 468 Query: 440 DEAGKKYAATVR-----SLLNNDREAEREHLTALPALD----------------MEHFMY 478 D + V ++D +A+ D +E+ + Sbjct: 469 DIVPDVAKSYVSKPAQGKRFDSDYDADEMKQVVQNKKDRAEGGKTIVCVSDRWTLEYDLA 528 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKIIS----KAIHRSSKPDLAIEVAMEAGRRGVDSVPT 534 G + + + + ++ + + K LA+E A + + Sbjct: 529 HYGCAKLMYLAISLAVKAKSRDERLEESDEIETLAAEEKNWLALEAAGHSDEALAAIIYQ 588 Query: 535 LLKK 538 L++ Sbjct: 589 PLQE 592 >UniRef50_Q2IEM8 OLD family-like ATP-dependent endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEM8_ANADE Length = 758 Score = 217 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 98/533 (18%), Positives = 176/533 (33%), Gaps = 101/533 (18%) Query: 1 MILERVEIVGFRGINR--LSLMLE-QNNVLIGENAWGKSSLLDALTLLL--SPESDLYHF 55 M L + I FR +++ + NV++GEN GK++++DAL LL P + Sbjct: 96 MHLATLRIENFRCFGSSGITIEFQAGMNVILGENNVGKTAIVDALRLLFSLGPGRRDVYV 155 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 + DF+ G H + + F P ++ R Sbjct: 156 QPQDFYCAAG--GEPAHEIRLDAIFEGLSNAEQ-----GVFYELLVPGPPVSAQVHLRFR 208 Query: 116 GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT--- 172 E+ S + G ++ + + LV M + LRDA R + G Sbjct: 209 LETVGGQSRVRQ----TVWGGEVEGQPVPPAVWELVSHMYLGALRDAESDLRPQRGGRVG 264 Query: 173 -------------------VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQ------ 207 V + + A ++ H L+ ++RQ Sbjct: 265 HLVKRVISDPVDRARVEAHVRQANRFILAEGGIQRTAEMINDHLSELAGNELRQSVRISL 324 Query: 208 ---GLSAMVQLL--------EHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMI-- 254 + L E F ++ L +R +N R + +R++ Sbjct: 325 GAPAFERVADTLRLLLPQAGESEFVAVYDVESWKELRQRAGANANLLDRVSEDGDRVLIR 384 Query: 255 ----------------------------DRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 D+ G +I +G+ L + L + Sbjct: 385 LGHLGKPEQEKLGELYAELLDHVEPFGVDQNGMGYNNLIYMGVVLGDLVERRKAGLQNYS 444 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLPL--------QRIATTNSGELLSLTPVEHVCR 338 LLIE+PE +HP + + + L+ + Q T++S L S ++ + Sbjct: 445 --ALLIEEPEAHIHPQLQVLVYDFLSRTSVIDDAGNQVQVFVTSHSPTLTSRASLDSLIV 502 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + R RV A L L + ++ R LF+R +LVEG +E + LA+ Sbjct: 503 MHRAEGRVTATALRRCPLDENQKADLRRYLDVTRSQLLFSRAVVLVEGISEALLFPVLAK 562 Query: 399 QCGHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEWHVLVDGDEAGKK 445 + G+ FD ++V+ A P R+ I ++ D D + Sbjct: 563 RAGYRFDHSAVEVVAVAGVSFAPFAALFNSDEPARRLHIPCALVTDDDRCAGE 615 >UniRef50_Q21PB9 ATP-dependent endonuclease of the OLD family n=3 Tax=Proteobacteria RepID=Q21PB9_SACD2 Length = 666 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 90/542 (16%), Positives = 171/542 (31%), Gaps = 57/542 (10%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M +E++ I FR R + + + V IG N GK++ + AL+ L S + Sbjct: 1 MKVEQISITNFRCFGRETTTFTLQDNSTVFIGSNGSGKTAAIQALSRLFGVTSKQRQVRK 60 Query: 58 DDFWFPPGDI---NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 DF +G + +IL+F + G + L Sbjct: 61 TDFHIEHDKDELASGSTLSIDVILSFPGHDEPDGADTIPEFFQQMAVETPGGDLKARIIL 120 Query: 115 EGESAEDG----SVMTLRSFLDKDGHPIDVEDINDQA----RHLVRLMPVLRLRDARFM- 165 + + +DG SV + + + D E + R ++L+ + R+ Sbjct: 121 KAKWIDDGTPLGSVEEDIRWAPRLTNNFDWEKDCTRVQASERSRIQLIYIPAHRNISEQV 180 Query: 166 -RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 I++ + ++ L++ + + N + + L + + Sbjct: 181 TNLIKSRFWQAAKWSDEFRNHVEALSKNIQASYAN--EAPAKLLLEKLSSRWKQVHDADT 238 Query: 225 AGQAR-----YRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLF--------- 270 R R R + + R + + + L Sbjct: 239 DTDPRLKLIDSRFERIIQNAGFTFFPNEFGQERDLADLSDGQKSLFHIALTAATLEAELA 298 Query: 271 ----ATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATT 322 ++ + LL IE+PE L P LS + Q + ++ Sbjct: 299 AIEMNYEDSPFDHDKMRRVCLTLLAIEEPENSLSPFFLSRIIEQALEIGSLDAAQVLISS 358 Query: 323 NSGELLSLTPVEHVCRLV-RESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCW 381 +S ++S E+V S+R ++ + E++ + P FARC Sbjct: 359 HSASIISRLEPENVRYFRLDRSNRTSSVQKILLPEDDEEASKFIRLAVKAYPEIYFARCV 418 Query: 382 LLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 +L EG +E VI LA G D + V+ K + I + L+D D Sbjct: 419 ILGEGASEEIVIPRLAEAMGFPLDPSFVPVVPLGGRYCVHFWKLLSDLKIPFVTLLDLDA 478 Query: 442 ----AGKKYAATVRSLLN------------NDREAEREHLTALPALDMEHFMYRQGFSDV 485 G K L+ DR + + + L D+ + + +V Sbjct: 479 GRSHGGAKLVQGTADRLDEMGIDWNSNSVVEDRLLDPDKIDTLEDADIWYDFDDNDWLNV 538 Query: 486 FH 487 F Sbjct: 539 FE 540 >UniRef50_Q07JA2 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07JA2_RHOP5 Length = 582 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 103/600 (17%), Positives = 185/600 (30%), Gaps = 73/600 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ + + FR +++ + VL+GEN GKS+++DAL LL P S +D Sbjct: 1 MHIDCLRLQRFRSCADVTVRFHRELTVLVGENNGGKSNIVDALRLLTLPLSGRRDRYPED 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 E H + F + L P +F G Sbjct: 61 ---DDLRRGSTETHYALEGRFA------GLGDTMKGLLISAVPDPTADLAVF----GMRY 107 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV--PNVP 177 + ++ TLR + + + L+R + + LRDA+ + T + Sbjct: 108 QTRTLGTLRGRASSWAGKFETAEPESGSTDLIRHVYLPPLRDAKQALGTGSATRIAALLQ 167 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLS-AMVQLLEHYFSEQGAGQARYRLMRRR 236 + T + FL + + I + A+ L + + + Sbjct: 168 HFLQTGEEEGFLTHVQRTGAPHRVLTAINTDIETALGDLTRGARPQTASLAFTAEALTDV 227 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 A + + L + I G ++ + L L L L+E+PE Sbjct: 228 ARDLRFRLADLGLPPEDIKSSGLGYANLLYMATVVVELAKAREADL-----TLFLVEEPE 282 Query: 297 TRLHPIMLSVAWHLLN----------------LLPLQRIATTNSGELLSLTPVEHVCRLV 340 LHP + + L +Q I TT+S L + EH+ + Sbjct: 283 AHLHPQLQMLVLDFLLAQAKKSVTQEITPGQPEGRIQVIVTTHSPNLTAWISPEHLVVIR 342 Query: 341 RESS--------RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + + + GL +++S ++ R + LF LLVEG E + Sbjct: 343 SAQDSGTTPATMKTVSIPINGLGLDPRMIQKVSRYLDVTRSALLFGSRALLVEGIAEALL 402 Query: 393 INELARQCGHHFDAE------GIKVIEFAQSGLKPLVKFA------RRMGIEWHVLVDGD 440 + +AR C + D G V P V + V+ D D Sbjct: 403 MPVIARHCIFNTDPHALQRFRGAVVAAIDGVDFAPYVHILLHPCEGATIADRVVVVTDTD 462 Query: 441 EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQG----FSDVFHRMAQIPENV 496 + A+ +EH ++ G +VF + Sbjct: 463 PHSPGNRKADLDKRAAEWGVADRLNVLTNAVTLEHELFSAGNGALLGEVFLLLHPQSAQR 522 Query: 497 PMNLRKIISKAIHRSS-----------KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLW 545 ++ A ++ K D A ++A +VP L+ V Sbjct: 523 WTTDVDSVAVADRPAAFVQLLKTTSTRKGDFAQQLAERIVAGSPFTVPAYLRDAIVAVAG 582 >UniRef50_C7PQN7 Plasmid-related protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQN7_CHIPD Length = 674 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 81/539 (15%), Positives = 166/539 (30%), Gaps = 43/539 (7%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + + I GF+ + + IG N+ GK+S L+AL L R Sbjct: 1 MKISTLTIKGFKSFGPQETRITLRKNLAAFIGLNSAGKTSALEALKRLFGSSLAEREIYR 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 +DF + + + + R + D I RLE Sbjct: 61 EDFHIGKDENSDEITERELSIEVRIDFTEEEQEAVPHFFSNMVVDDMDMDLYIRIRLEAT 120 Query: 118 SAED-----GSVMTLRSFLD----KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI 168 + G + F+ P + + R L++++ V +R + Sbjct: 121 WKKSDMTPQGEIEIKNYFIKVPEGSTEQPDSKQPFPNHFRSLIQILYVPAIRRPAEQLKY 180 Query: 169 RNGT-----VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 +GT + + + + D E++ + L + +++ + + ++ Sbjct: 181 ASGTILYRVLRKINWKDDFKEEFDAKIEEINEAFKGL--PEFATVQTSITGFWQQFHKDE 238 Query: 224 -----GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 G + E + ID G + L L +LL + Sbjct: 239 RYRDTQIGFSGSDFETVLKRLEVSFNPTGTHKSFGIDELGEGYRSMFYLTLVCSLLDVEE 298 Query: 279 TLRLDKDAR---------PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSG 325 + +D +L IE+PE + P +L +L + Q + ++++ Sbjct: 299 KMADTEDEESIGVNRPLLTILAIEEPENHIAPQLLGRVIKILKTIAEKENSQVVLSSHTP 358 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVE 385 ++ E + + + ++ + N P FAR ++ E Sbjct: 359 AIIKRLDPESILHFRITENYETEVNKIKLPVKKSEAYKYVKEAVHNYPEIYFARLVVIGE 418 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 G++E + N L FD I + + K + I L+D D + Sbjct: 419 GDSEAVIFNRLMEVMNVDFDDNIITFAPLGHRFVNHIWKLLDALKIPHITLLDLDREREG 478 Query: 446 YA-ATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKI 503 V+ + E E L D + F +M +++K+ Sbjct: 479 GGWGRVKYAIEQLLEVNVEKKDLLELKD-----GSVLPDEDFRKMHTWSIKDKDDIKKL 532 >UniRef50_C7X4G8 SMC domain-containing protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4G8_9PORP Length = 693 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 80/539 (14%), Positives = 153/539 (28%), Gaps = 65/539 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ ++I FR S+ E NV+IG N GKS+LL A+ L+L D Sbjct: 13 MYIKEIKISNFRNFRDASVPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYSDGRRLGTCDL 72 Query: 60 FWF-PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT-DGYHRIFYRLEGE 117 F+ + + + I L F S T ++ Y + Sbjct: 73 FYETDVVTLQQQSPRIKITLIFHRSQGEALDSAEMGLFSGMMTDPALSEEAKLRYEFKLA 132 Query: 118 SAEDGSVM----------TLRSFLDKDGHPI-DVEDINDQARHLVRLMPVLRLRDARFMR 166 ++ + + +D+D + + + L D +F+ Sbjct: 133 DDQEDNYKADVAGVTTAKEIWKIIDRDYIRLYRSSRSGGNQAAGISVNDALGQMDFQFLD 192 Query: 167 RIRNGTVPNVPNVE-VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL--------- 216 IR+ + + L+F + ++ +I++ L A+ Sbjct: 193 AIRDVSHDLYAGYNPLLRDVLNFFIDYSVKNDATKTEDEIKEQLKALRNDFVQQSSPLMQ 252 Query: 217 --------------------EHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR 256 F+ + + +Y I Sbjct: 253 TLQDRLHNGKNVFLKYALDTGATFNGAVPDFDGEVTENEMFAVLRMIIKYTVGIEVPATY 312 Query: 257 PGGRSYRVILLGLFATLLQAKGTLRLDK---DARPLLLIEDPETRLHPIMLSVAWHLLNL 313 G +I + L +QA ++ K L +E+ E LHP M L Sbjct: 313 NGLGYNNLIYMSLLLAKMQADSSITYMKRNAKVISFLAVEECEAHLHPAMQYKFLQFLQD 372 Query: 314 LP-----LQRIATTNSGELLSLTPVEHVCRLV------RESSRVAAWRLGPSGLSTEDSR 362 Q T++S ++ S ++ + L + + Sbjct: 373 NKANGHVRQIFMTSHSTQIASAVKLDDLICLTSPVLGQINVGYPRVIYKEDNDDDVVSKQ 432 Query: 363 RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL 422 + I + FA + VEG E ++ AR + E + V+ Sbjct: 433 YVQRFIDATKADMFFANKLIFVEGVAEELLLPVFARYLNKNLTDEHVLVVNMGGRYFNHF 492 Query: 423 VKFAR-----RMGIEWHVLVDGDEAGKKYA--ATVRSLLNNDREAEREHLTALPALDME 474 +K + + L D D KK + + + + D E Sbjct: 493 LKLFDTNNPYTINKKIVCLTDIDPCRKKNEPDEDYEACYPYEYNIDTANYNYKHHADTE 551 >UniRef50_B8GG54 SMC domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GG54_METPE Length = 623 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 103/634 (16%), Positives = 198/634 (31%), Gaps = 98/634 (15%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYH-FER 57 M LE++ I G++ + NVL+GEN GKSS++DA+ L+LS + Sbjct: 1 MFLEKISISGYKNFNENFEICFSSGLNVLVGENGVGKSSIIDAIRLILSEDEYGRSGISE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF P + + + I+ F E E + P + + L + Sbjct: 61 KDFHRPFVKDSVASNKIKIVAHFDELSDFE---------EIAFLPWREDKNEARLSLVID 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 ++ R G + L+ + + LRDA R G+ Sbjct: 112 DTQNN---RGRYNRKIWGGVSQSNPYEKELVELINCIYLPPLRDAEAKLREGRGSRLARL 168 Query: 178 NVEVTARQLDF---------LARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA 228 + + + + +++S ++ + + A + + G Sbjct: 169 ILNLNKEEFLKAKRDGKSLKIEEKVNSFYNDIVNDKNEPIFKANELIKNSLKNAIGTVFG 228 Query: 229 RYRLMRRRASNEQRSWRYLDII-------------NRMIDRPGGRSYRVILLGLFATLLQ 275 + ++ +N R L + R ++ +I L L+ Sbjct: 229 QDTRIQFSETNINRIIENLRLFFFPEINQNGQEFNYRSLEENSLGYNNLIYLATVLAELR 288 Query: 276 AKGTLRLDKDA-RPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSL 330 + D+ +LLIE+PE LHP + L +Q I TT+S L S Sbjct: 289 PIKEVESDEPEFLKILLIEEPEAHLHPQLQIKLLKYLQKETENSNIQIIITTHSPVLASA 348 Query: 331 TPVEHVCRLVRESS-RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 ++ + L + A + GL + ++ + + + FA+ +LVEG E Sbjct: 349 VSIDAIIHLSFSKDRKTIATPIRKCGLPSPSKAFLTRWLDATKSTIFFAKGVILVEGIAE 408 Query: 390 TWVINELAR------------QCGHHFDAEGIKVIEFAQSGLKPLVKFA--------RRM 429 +I ELA+ + + +GI VI K ++ Sbjct: 409 AMLIPELAKRVIKKYNSEYKTKLPGTLEEQGISVININGINFKHFMQLFCNINEDSQPAF 468 Query: 430 GIE--WHVLVDGDEAGKKYAATVRS------LLNNDREAEREHLTALPALDMEHFMYRQG 481 I + D D L N E+ + +G Sbjct: 469 SIPLRCVGITDNDPPSNSTHLEPIEGNNPILQLVNRINKSENSRIFSNLKTFEYDLALEG 528 Query: 482 -------------------FSDVFHRMAQIP-ENVPMNLRKIISKAI------HRSSKPD 515 F ++ E+ + ++I+++ + + K Sbjct: 529 GNLTPMIQIFLKCLDTNGPIRKEFTDYLEVKWEDASRDTKEIVAQKLLLRIDSSKIGKGR 588 Query: 516 LAIEVAM-EAGRRGVDSVPTLLKKMFSRVLWLAR 548 A E+A +P +K + V + Sbjct: 589 YAQELADLLLKDCTSFEIPKYIKDAINWVCEIKN 622 >UniRef50_C8WNB5 SMC domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNB5_EGGLE Length = 564 Score = 215 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 190/573 (33%), Gaps = 60/573 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESD-LYHFERD 58 M ++++ I +R + L L L NV IG N GKS++L A+ LL P ER Sbjct: 1 MKIDKLTIKNYRSVRDLELSLSPRINVFIGANNVGKSNILSAMEYLLGPSYPTANRLERW 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF+ E L I L F + + ++ W G + G Sbjct: 61 DFYQG-----DEELPLKIALDFDD--------GAHLSFDSTW-HDGYGREKHGLNYNGSY 106 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 D S + + Q L R++ R + I + V Sbjct: 107 ISDEVRSRYISASIGPDRRVLDNPASSQWSLLGRMLKEFNERLSE--ETISSADGHTVTK 164 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 E + + + ++ +++D + + ++++ + Q + A Sbjct: 165 AEAFKQSMQEIRDQIL---FSITDQDGTNLMGELSRIMQQETANQLNCSPNDLTVDLNAY 221 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGL--FATLLQAKGTLRLDKDARPLLLIEDPE 296 + ++ L I + + +G+ T+ + +L + L I++PE Sbjct: 222 DPWNLYKTLQIFVTEQETGVQMRASDMGMGVQASLTIAILRAYSKLKLKNQTPLFIDEPE 281 Query: 297 TRLHPIMLSVAWHLLNLLP---LQRIATTNSGELLSLTPVEHVCRLVRE-SSRVAAWRLG 352 LHP + ++ L Q TT+S E + L + + + + + Sbjct: 282 LYLHPQARRKFYRVIEELADSGTQIFLTTHSTEFIDLGNFDQIYLVRKNAERGTYVRKAD 341 Query: 353 PSGLSTEDSRRISFHIRFNR------------------PSSLFARCWLLVEGETETWVIN 394 P + R++ NR LFA LLVEGE+E+ ++ Sbjct: 342 PQSFVDDLQNRLNIRTDANRLMLEYRNAFENTGDSQKAAEGLFASKVLLVEGESESLILP 401 Query: 395 ELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 + G +D +GI ++ L + GI +L DGD + ++ Sbjct: 402 FCFDRIGFDYDGKGISIVRCGGKNELDRFYRLYSEFGIPCFILFDGDFQNFQTEDQAHTI 461 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSK 513 N ++ F F + +N+ +N I +K Sbjct: 462 KANKSILSLFGC-------LDDFPDGNVHESYFGFRTLLEDNLGLN-------GIGSKTK 507 Query: 514 PDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 A R +VP +K++ ++ L Sbjct: 508 GLRLFVRFKNAVSREEAAVPFWVKEIADKLDGL 540 >UniRef50_C7VU27 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU27_ENTFA Length = 674 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 72/526 (13%), Positives = 164/526 (31%), Gaps = 45/526 (8%) Query: 1 MILERVEIVGFRGINRL--SLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L R+EI FR ++ ++ +IG N+ GK+++L+A+ + + Sbjct: 1 MKLTRLEICNFRSFGSEAETIYFDEFTGIIGHNSAGKTTILNAINAMFGN----LKLRKS 56 Query: 59 DFWFPPGDINGR--EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 DF+ + + F ++ T E Sbjct: 57 DFYADNNESENEPLSLWIKAKFEFFNVDNDPQSYSVPSFFQSFTISETGEAPYTEILFEA 116 Query: 117 ESAE----DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG- 171 E + +G + T ++L G + R + ++ + +R+ +G Sbjct: 117 EWQQGNTPNGVIETSLNYL-LVGEEEKKFPMPLLDRSKIDVIYIPAIRNPYDQLSNASGT 175 Query: 172 -TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQ------LLEHYFSEQG 224 + + + ++ ++++ + +S + L + + F+E Sbjct: 176 ILWRLLKQLNWKEGDKEQISEKIAALDEAISAQEGISLLEKTISSQWKTYHTDSRFAEAS 235 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT----- 279 L + E + G + L L+ + Sbjct: 236 LKFGSTDLEKILKKLEVEFSPSPFEQTYRVGDLGDGLQSLFYFSLIDAFLKLEEKGLKEV 295 Query: 280 ----------LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSG 325 L ++ A LLL+E+PE ++P +L A L + Q I T++S Sbjct: 296 STGVMEESRTLNVNPPAITLLLVEEPENHINPQLLGNALSNLKSISNNANSQVIFTSHSP 355 Query: 326 ELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE--DSRRISFHIRFNRPSSLFARCWLL 383 ++ E++ + R + + L + ++ + P F+ + Sbjct: 356 SVIKRMDPENIRHI-RMDKLKKSTVVNEITLPDDNGEAYKFVKGAIQVYPELYFSSLVIF 414 Query: 384 VEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAG 443 EG++E +I ++ + D EGI ++ + + + I + L+D D+ Sbjct: 415 GEGDSEELLIPYFLKKKFPNLDTEGISIVPLGGRHVNHFWRLLSMLKIPYITLLDFDQER 474 Query: 444 KKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 + E+ + F D Sbjct: 475 YGGGWCRIQYALREMIKLEPGFGETTKS--ENGIKLNDFIDDISSW 518 >UniRef50_B9MK40 Putative uncharacterized protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MK40_ANATD Length = 685 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 87/539 (16%), Positives = 175/539 (32%), Gaps = 49/539 (9%) Query: 1 MILERVEIVGFRGI--NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M +++++I FR + ++ LIG N+ GK+++L AL + ++ +R Sbjct: 1 MYIDKIKIRNFRCFGPEETVIEFDKLTALIGANSCGKTAVLHALMKIFGSDNK--EIKRS 58 Query: 59 DFWF----PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG---YHRIF 111 DF P +I + ++ + L+F E + G Y RI Sbjct: 59 DFHVPKSMDPQEIENNDLYIEVKLSFPELRQENTELNSIPSFWNYMVIREPGVLPYVRIC 118 Query: 112 YRLEGESAE--DGSVMTLRSFLDKDGHPIDVEDINDQARHLVR---LMPVLRLRD-ARFM 165 + + + DG + T F+ D R + + V +RD + + Sbjct: 119 LKSSWQKSNTPDGDIETEILFIKAPEGREKDSDYEKAKREHLSRILFVYVPAIRDVSPQL 178 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGL--SAMVQLLEHYFSEQ 223 R + N + + N RE + L L + + Y + Sbjct: 179 RNVSNSILWKILNSIEWEEDFKSKIREKTEEIDKLFAKNPGVSLVKEIISNTWKKYHRDY 238 Query: 224 GAGQARYRLMRRRASN-----EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ--- 275 +A R R E + + + ++ G + L L +LL+ Sbjct: 239 RYKEAHMRFSRGDLDTVLKKVEIEFYPTSEPKSYTVNELGDGLRSLFYLTLVNSLLEFEN 298 Query: 276 --------AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTN 323 +K + LL IE+PE + P +L L + Q I T++ Sbjct: 299 RILQSKHSSKSPFNKEPSTLVLLAIEEPENHVCPHLLGRIMDNLKDISSKQNAQVILTSH 358 Query: 324 SGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWL 382 S ++S + L ++ +++ + P F+R + Sbjct: 359 SASIISRIEPTEIRHLRIKNEDLCTKVSRIILPEQIDEAFKYVKEAVKAYPEIYFSRLVI 418 Query: 383 LVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEA 442 L EG++E +I ++ + G D+ I ++ + + + +GI + L+D D Sbjct: 419 LGEGDSEELIIKKMIEKSGLSADSCAISIVPLGGRFVNHFWRLLQDIGINYITLLDMDIE 478 Query: 443 GKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLR 501 + N E + + F M + + Sbjct: 479 RNTGGWEKLHYIMNQLIQSGYD---------EKSVLADLSKEEFDNMPNWSYDEYSREK 528 >UniRef50_C5BEA6 Putative uncharacterized protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BEA6_EDWI9 Length = 296 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 139/266 (52%), Positives = 175/266 (65%), Gaps = 4/266 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+E+VGFRGINR+SL L+ N VLIGENAWGKSSLLDALTL LSPE DLY F+ DF Sbjct: 1 MYLERIEVVGFRGINRISLSLDDNTVLIGENAWGKSSLLDALTLCLSPERDLYRFQPHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 +FPPGD REHHL I+ TF E G R RRY L W D RI++R EGE ++ Sbjct: 61 YFPPGDETAREHHLQIVFTFCEIERGHARARRYYRLSPLWQESGDRLQRIYFRQEGELSD 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV--PNVPN 178 D +V T RSFL++ G + + ++ AR L+RL PVLRLRDARF+RR+ + ++P+ Sbjct: 121 DNTVCTWRSFLNEQGESLSLHHVDLLARELIRLHPVLRLRDARFIRRLHPSVLAARHLPD 180 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR--YRLMRRR 236 A+QLD L REL +PQ LS+G++R GL AM QLLEHYFS G A R R Sbjct: 181 QAQVAQQLDDLTRELVCNPQKLSNGELRAGLGAMQQLLEHYFSTNGDETAVGARRRHRNE 240 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSY 262 + +++WR L+ IN+MI G Y Sbjct: 241 IIHGRQAWRSLENINQMIAASGSPQY 266 >UniRef50_A1VKY5 ATP-dependent endonuclease of the OLD family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VKY5_POLNA Length = 637 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 100/574 (17%), Positives = 194/574 (33%), Gaps = 57/574 (9%) Query: 1 MILERVEIVGFRGINR----------LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE 49 M L ++++ FR L L NVLIGEN GKS+++DA+ L++ Sbjct: 56 MHLSKIKLWNFRKYGDNSTFILEKPNLYLDFNSGLNVLIGENDSGKSAIIDAIRLVMKTH 115 Query: 50 S-DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 S D + DDF L I LT + P + T Sbjct: 116 SYDWLRIDDDDFHVGQNR-------LRIELTLADIKPEEGKNFTEFLSWEILDGITVPSL 168 Query: 109 RIFYRLEGES-AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR- 166 R+ ++ S +R+ D DG + E A+ +++ + LRDA+ Sbjct: 169 RLILDVKKNLLTNQVSPYEVRAGADADGRQLSPE-----AKEYLKVTYLKPLRDAKEELV 223 Query: 167 RIRNGTVPNVPNVEVTARQLD---FLARELSSHPQNLSDGQIRQGL--SAMVQLLEHYFS 221 +N + + + L +L++ +++ + L + Sbjct: 224 ARKNSRLSQILVGHEAFKNRGTDHLLMGQLANFNESIENYFNGTDLMGVEITDQFGKSLK 283 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR 281 +Q + + + + R + LG L A L Sbjct: 284 DQIDTYVQALYEPDKKTELAVTERGQLKNLLEKLELSIQGETRPGLGTLNRLFMASELLH 343 Query: 282 LDKDARP---LLLIEDPETRLHPIMLSVAWHLLNLLP-LQRIATTNSGELLSLTPVEHVC 337 L+K+ L L+E+ E LHP A +Q I TT+S + S ++++ Sbjct: 344 LNKNNWTGIRLGLVEELEAHLHPQAQMQAIETFQKHDEVQLILTTHSPNIGSKLELKNLI 403 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 + + L+T+D + + + + F++ +LVEG E ++ E A Sbjct: 404 ICS--GGNAFSMNAENTELNTDDYVFLQRFLDVTKANLFFSKGTILVEGWAEELILPEFA 461 Query: 398 RQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGI-----EWHVLVDGDEA---------- 442 + + +G+ VI A +R I ++ D D A Sbjct: 462 KLINFNLTEKGVSVINVASIAFIHYANIFKRKKIPHLILPVAIITDVDIAPNDEDGPIPG 521 Query: 443 GKKYAATVRSLLNNDREAEREHLTALPALDMEHFM-YRQGFSDVFHRMAQIPENVPM--N 499 K+ L + + P +E+ + F + F + + + + Sbjct: 522 DKQKLTEACRLKKEKYDGQCVKSFIAPQWTLEYCLSKSSTFREKFAEITKTVHSKTDWTD 581 Query: 500 LRKIISKAIHRSS--KPDLAIEVAMEAGRRGVDS 531 +++ + S K ++A +A + +D Sbjct: 582 FDAKLAEKLKNKSLKKTEIASRLAQAISKGEIDK 615 >UniRef50_C0QF29 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QF29_DESAH Length = 658 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 99/650 (15%), Positives = 191/650 (29%), Gaps = 111/650 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ V I +R + + ++ L+G N GKSS++ AL LL +P + + + F Sbjct: 1 MKLKWVYIKNYRSCKDVRINIDSMQALVGANNAGKSSIIRALDLLFNPSTT--KVDEETF 58 Query: 61 WFPPGD------------------INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 W + + L TF + ++ A Sbjct: 59 WNGDSELQIWIEAVFNELSDAEKEDEKLKPFLRPDDTFHIARSATWKIEEPEEEGASPGD 118 Query: 103 CTD---------GYHRIFYR---------LEGESAEDGSVMTLRSFLDKDG--------- 135 ++ + E +D + FL G Sbjct: 119 GKPVISQHFCKPMPKYVWLQEGQINGKNITEWWKNKDDLKVGDADFLGYTGTSKPAVGVW 178 Query: 136 ----------------HPIDVEDINDQARHLVR-----LMPVLRLRDARFMRRIR--NGT 172 D +++ + V +RD ++ N Sbjct: 179 KEKVKEFIEAHLTDDDFEDVWNDNPQGYAGVLKGTLPHFIFVPAVRDITDEAKVTKTNPF 238 Query: 173 VPNV---------PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQ 223 + L+ L + L+ I + + +L+ Y S Sbjct: 239 GKLLYAVLESVTAQQKAELETTLEGLQKRLNRIGGAERLESIVETEKKLNDVLKEYMSCD 298 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + + + + Q D M+ G R I+ + + Sbjct: 299 LEIEFQSPSVETLLTTPQL--FADDGFRNMVTNKGHGLQRAIIFSILRCYSELVTGAGEQ 356 Query: 284 KDARPLLLIEDPETRLHPIMLS---VAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLV 340 K + +E+PE +HP + + Q + +T+S LL + + V R+ Sbjct: 357 KKKPMIFAVEEPELYMHPQAQRNIRKVFRGIADKDDQVLFSTHSSLLLDVAYFDEVIRVE 416 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISFHI---------------------RFNRPSSLFAR 379 + + S + + + NR FA+ Sbjct: 417 STQEEIDGKKTVKSKVWQLPMWVMIEDLKARHGKDATAESMRELYSHAYHPNRSEGFFAK 476 Query: 380 CWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVD 438 +LVEG TE + + A GH DA I V++ G + L + +GI +L D Sbjct: 477 SIILVEGATEQYSLPIYAEASGHQLDALNISVVDSGGKGSMDRLYRIFNELGIPCFILFD 536 Query: 439 GDEAGKKYAATVRSLLNNDREAE-REHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVP 497 D +S+ E + A+ D + +D+ +IP Sbjct: 537 YDRGNGDKNIVDKSVELLGLIGEPTDPPDAIMIRDNVACFPHKWETDL---APEIPGVEK 593 Query: 498 MNLRKIISKAIHRSS-KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 + +H S KP +A +A + + VP + + + + + Sbjct: 594 LTADARKDMGLHGYSGKPLVARYIARKLTSQDPPVVPPSIHSILEKAVAV 643 >UniRef50_C4LF54 RecF/RecN/SMC N domain protein n=4 Tax=Gammaproteobacteria RepID=C4LF54_TOLAT Length = 650 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 100/533 (18%), Positives = 180/533 (33%), Gaps = 77/533 (14%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLL-SPESDLYHFER 57 M L ++I GFR ++ L NV++GEN GK++++ A+ L ES Y Sbjct: 1 MYLSNLKIQGFRCFDKDFNVQLTNGLNVIVGENGAGKTAIISAIRQLFHDSESGRYSITS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF+ P I F + P + ++ E Sbjct: 61 DDFYSPFIAGGLAATSFSIGAEFDGLD---------VMDKVALLPWVGASNTALLNIQAE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + E + + G + + L++ + + LRDA + + Sbjct: 112 NRE----IRGQFKRVIWGGKSKSSQFDPELLDLIQCIYLPPLRDAESKLSNGRQSRLSKL 167 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGL----------------SAMVQLLEHYFS 221 + ++L + HP S + + L + + + H+F Sbjct: 168 LKALNRKKLKQCRIKGELHPLEESVKEFNESLAADDKLSIKDANKLITENLTKAIGHHFG 227 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIIN-----RMIDRPGGRSYRVILLGLFATLLQA 276 +Q + Q + A + + + R + + ++ + L Sbjct: 228 QQTSIQFAESDFTKIAESLTLMFFPDLSVEGVVSFRELSQNSLGYNNLLYIASILAELTL 287 Query: 277 KGTLR-LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNSGELLSL 330 D+ LLLIE+PE LHP + + L + +Q + TT+S L S Sbjct: 288 DDEDEYEDQPLFKLLLIEEPEAHLHPQLQIRLLNHLKKVAEENKNVQVVVTTHSTVLASS 347 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 +E + L + S A L GL+ + S+ I+ + + + LFA +LVEG E Sbjct: 348 VEIEAIIHLSK-SPVPVATPLRTCGLTPDSSKFINRWLDVTKSNLLFASGVILVEGIAEQ 406 Query: 391 WVINELARQC-------GHHFDAEGIKVIEFAQSGLKPLVKFA---------------RR 428 +I LA+ G + GI VI K ++ Sbjct: 407 MLIPILAKIVLEDQKEGGKSLEDLGISVINLNGIYFKHFMQLYCDIESADDSEGKTITEN 466 Query: 429 MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQG 481 + I L D D R + ++D+E E + +E + G Sbjct: 467 LPIRCAGLTDLDPP----KKVTRQVPDSDKEGETREI-------IEDLIPYDG 508 >UniRef50_C2NJX4 Putative uncharacterized protein n=1 Tax=Bacillus cereus BGSC 6E1 RepID=C2NJX4_BACCE Length = 664 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 71/492 (14%), Positives = 161/492 (32%), Gaps = 30/492 (6%) Query: 1 MILERVEIVGFRGI--NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M++ + + FR + E LIG N+ GK+SL+ AL L ++ + Sbjct: 1 MLISELHVSNFRSFGYESQMIETENLTALIGANSSGKTSLIMALLRLFGQKNTDRTLIKT 60 Query: 59 DFWFPPGDINGREHHLHI----ILTFRESLPGRHRVRR--YRPLEACWTPCTDGYHRIFY 112 DF P G + + + + F E + ++ + Sbjct: 61 DFHIPEGADVSKIKEIDLMIEAKIIFPELKLQSPVDVKTIPEYIKHLIIEKAGEEPYLRI 120 Query: 113 RLEGESAEDGSVMTLRSF--------LDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF 164 RL+G+ + + + D+ + + L+++M + +RD Sbjct: 121 RLKGKWIQGSTPEGNIEQELVYVKIPYGHEEKEEDLTKVPIHHQKLIQMMYIPAMRDPAK 180 Query: 165 MRRIRNG-TVPNVPNVEVTARQLDFLARELSSHPQNL--SDGQIRQGLSAMVQLLEHYFS 221 + +G + + + L+ + L+S + L I+ + Y + Sbjct: 181 QLKNASGTLLWRIFDGIDWPENLNEDIKSLTSPIETLFKEIPSIKGIQGILNTQWSKYHN 240 Query: 222 EQGAGQARYRLMRRRASN-----EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 + ++++ E +D + +D G + + L +TLL+ Sbjct: 241 DGRYSNSQFKFNGNSLDEFLKNVEILFNPTIDGNSVKVDSLGDGLKSLFYITLVSTLLEI 300 Query: 277 KGTLRLDKDAR-PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLT 331 + D + IE+PE + +L L + Q + ++++ ++ Sbjct: 301 ENKQEKDDKPLLNIFAIEEPENHISQHLLGRIVRNLKEIAAKDNAQVVLSSHNSSIVGKI 360 Query: 332 PVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETW 391 E++ L + + +D+ P F++ +L EG++E Sbjct: 361 EPEYIRHLQIQDIGSIVNNISLPEKI-DDAHTYIKEAVKAYPDLYFSKLVILGEGDSEEI 419 Query: 392 VINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 V+ +L + D I ++ + + K + I L+D D T Sbjct: 420 VLPKLLLADDIYLDDFNISIVPLGGRHVNHMWKLLNDLSIPHITLLDLDRERGGGDWTRI 479 Query: 452 SLLNNDREAERE 463 + Sbjct: 480 KYVLKQLNKNNR 491 >UniRef50_C6CBW9 Putative exonuclease n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBW9_DICDC Length = 659 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 84/508 (16%), Positives = 155/508 (30%), Gaps = 38/508 (7%) Query: 1 MILERVEIVGFRGINRL--SLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + ++EI GF+ + + ++ + LIG N GK+++L ALT + +S + D Sbjct: 1 MKITQMEIKGFKSFDNVGQTININSFTSLIGGNGTGKTAVLLALTRMFGVKSSDRIIQVD 60 Query: 59 DFWFPPGDIN----GREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 DF+ PPGD RE + + F + G + + +L Sbjct: 61 DFYVPPGDEIDTQDERELSVRVKFEFADLEDGEDN-TVADFFKHLVSSEAAEIPYCTAKL 119 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV- 173 + + + ++I R + + V RD + GT+ Sbjct: 120 KAKWTKTNLAEGDIESDLVWEIGEYEKNITAYERSKIHVHYVPAYRDPAQQLKQTAGTIM 179 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQ-----IRQGLSAMVQLL--EHYFSEQGAG 226 + N + Q+ E++ N + I L + L YF + Sbjct: 180 HRLINAVEWSDQMASTVDEVAVSIGNQFQEEVGVQTITSSLGRNWKTLFTGGYFEKLQIK 239 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT------- 279 + + D +R + L L + + Sbjct: 240 PVVNGIEDVLKHIDTVFLPSPDTQPLPTERLSDGMKSLFYLSLVKSAFDIEDEIINSDGK 299 Query: 280 ------LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLS 329 L ++LIE+PE L P L L + Q + TT++ LL+ Sbjct: 300 QLSISVEALAPPNLTIILIEEPENHLSPQYLGRIVKLCEEISENDRAQVVLTTHAPSLLN 359 Query: 330 LTPVEHVCRLVRESSRVAAWRL------GPSGLSTEDSRRISFHIRFNRPSSLFARCWLL 383 E++ ++ + D+ P FA+ +L Sbjct: 360 RVEPENIRYFRLHDNKNTIVKEILLPREDKDDAENVDTFTYVKEAVKAYPEIYFAKVVIL 419 Query: 384 VEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAG 443 EG++E VI ++A+ G D I + K + I L+D D Sbjct: 420 GEGDSEEIVIPKIAQVNGIEIDTSLITFAPLGGRYVNHFWKLLNELSIPHVTLLDYDFRR 479 Query: 444 KKYAATVRSLLNNDREAEREHLTALPAL 471 + L + Sbjct: 480 GGGGWGRIKYAVKQLISIGVDKNILLKM 507 >UniRef50_B5FD69 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio fischeri MJ11 RepID=B5FD69_VIBFM Length = 648 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 167/508 (32%), Gaps = 66/508 (12%) Query: 1 MILERVEIVGFRGINR-LSLML-EQNNVLIGENAWGKSSLLDALTLLL-SPESDLYHFER 57 M L +++ GFR ++ S+ L ++ NV++GEN GK++++ A+ L ES Y Sbjct: 1 MYLSKLKAEGFRCFDKGFSVKLTDELNVIVGENGAGKTAVISAIRQLFQDSESGRYSVTS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF+ P I F + + P L+ E Sbjct: 61 DDFFNPFVAGGKAATSFSICAEFDGLDVKD---------KVAFLPWVGSSDTALLNLQAE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + E + R G + + LV+ + + LRDA + + Sbjct: 112 NKE----IRGRFKKVIWGGKSKSSQFDPELLDLVQCIYLPPLRDAESKLSNGRQSRLSKL 167 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGL----------------SAMVQLLEHYFS 221 + +QL ++ HP S + L + + + H+F Sbjct: 168 LKALNRKQLKQCRKDDKLHPLEASLKSFNESLATDDKLSIKDANKLITENLTKAIGHHFG 227 Query: 222 EQGAGQARYRLMRRRASNEQRSWR-----YLDIINRMIDRPGGRSYRVILLGLFATLLQA 276 ++ + Q + + + + + R + + ++ + L Sbjct: 228 QKTSIQFAESDFTKISESLTLMFFPDLSAEDQELFRDLSQNSLGYNNLLYIASIMAELTL 287 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNSGELLSLT 331 LLLIE+PE LHP + L + +Q I TT+S L S Sbjct: 288 DEDDEEQP-IFKLLLIEEPEAHLHPQLQIRLLTHLKSVAEKNKNVQVIVTTHSTVLASSV 346 Query: 332 PVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETW 391 +E + L R S A L GL T S+ I+ + + + LFA +LVEG E Sbjct: 347 ELESIIHLSR-SPEPVATPLRTCGLPTASSQFINRWLDVTKSNLLFANGVILVEGIAEQM 405 Query: 392 VINELARQCGHH-------FDAEGIKVIEFAQSGLKPLVKFA---------------RRM 429 +I LA+ + GI I K ++ + Sbjct: 406 IIPTLAKIVLKEQMDGRNSLEDLGISTINLNGIYFKHFMQLYCNVSTSDDTEEETVGESI 465 Query: 430 GIEWHVLVDGDEAGKKYAATVRSLLNND 457 + + D D + + Sbjct: 466 PVRCAGITDLDPPKTIKKQVPNPQKDGE 493 >UniRef50_Q24NG6 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=Q24NG6_DESHY Length = 708 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 88/541 (16%), Positives = 178/541 (32%), Gaps = 70/541 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + R++I +R + + + NV+IGEN GK+++L AL + DD Sbjct: 39 MYISRLKIQNYRCFQDVEIEFSEGLNVIIGENNCGKTTILKALQCFFKGSNTGSAMGIDD 98 Query: 60 FWFPPGDINGREHHLHIILTF--RESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 F I + + +LT + + + L +P F+ E + Sbjct: 99 FNKGIT-IGEKPPEITFVLTIQSSKHEKAQDKAVVASWLTKLVSPWEATLTYKFFLPEAD 157 Query: 118 SA---------------EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP------V 156 L L K I + + R + + Sbjct: 158 QKRYVADIRCIQDDDDRNSKKWAVLERHLKKYTPRIYGGNYESKNRADQEYLDKFHCEVL 217 Query: 157 LRLRDARF-MRRIRNGTVPNVPNVEVTARQLDFLAREL-------SSHPQNLSDGQIRQG 208 LRD M RN + V N V + ++ E + ++ S + Sbjct: 218 DALRDVESKMFTGRNALLKQVLNFFVDSDLIEKEETERETLQVQRNQTFESTSSSLVANM 277 Query: 209 LS--AMVQLLEHYFSEQGAGQARYRLMRRRASNEQRS-----WRYLDIINRMIDRPGGRS 261 + ++ ++ E A + L + ++ S + I I G Sbjct: 278 IERVSVSKIFELTEKTGAAVGGQPTLGGQLDESDVLSVLKLMIKKETGIEVPIVNNGMGY 337 Query: 262 YRVILLGLFATLLQAKGTLRLDKDAR--PLLLIEDPETRLHPIMLSVAWHLLN------L 313 +I + L + + + + ++A+ P+LLIE+PE LHP + L Sbjct: 338 NNLIYISLLLSKFKMLVSSEMGENAKVFPMLLIEEPEAHLHPALQYSFLRFLKDEMDKQE 397 Query: 314 LPLQRIATTNSGELLSLTPVEHVCRLVRE--SSRVAAWRLGPSGLSTED---SRRISFHI 368 + Q TT+S + + ++ + + + V A+ + +D + I+ ++ Sbjct: 398 ISRQIFITTHSTHITAAVGLDPIICMNINALGNVVPAYPGKVFSDTADDQASKKYIARYL 457 Query: 369 RFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR- 427 + + LF++ L EG E ++ LA G D + ++ K +K Sbjct: 458 DATKSTMLFSKAVLFGEGLAEQILLPILAEYDGRSLDRSHVSMVRVDALTFKHFIKIFGS 517 Query: 428 ---------RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 + ++D D + + A + LD+E ++ Sbjct: 518 GIQEDRKKYAVSRRVACIIDSDPSRILHEAPAGKQRRWKKCYP-------FELDVEPELF 570 Query: 479 R 479 Sbjct: 571 E 571 >UniRef50_Q12XW2 Putative uncharacterized protein n=2 Tax=Archaea RepID=Q12XW2_METBU Length = 594 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 102/591 (17%), Positives = 199/591 (33%), Gaps = 44/591 (7%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH---FERDD 59 ++ V I GFRG+ + + LEQ +L G N GK+S L AL L L + F + D Sbjct: 5 IKTVRIAGFRGLENIEVELEQTTILTGMNNTGKTSFLKALQLALGNRQFVSQDDFFIKGD 64 Query: 60 FWFPPGDINGREHHLHII-------------LTFRESLPGRHRVRRYRPLEACWTPCTDG 106 F ++ ++ L E + R + PL T Sbjct: 65 FVSKEIIVDLLIVPINGDGDERDDFSPDWETLFTIERVRNDDAGRSFVPLRTVITFDEVN 124 Query: 107 YHR----IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHL--VRLMPVLRLR 160 + + E + V D+ D + H + + R Sbjct: 125 NNYKTQQFILKFWPELIKKFDVPGSEQKDINWYEVKDIGDSSKSNFHFDEIPFFYMDAQR 184 Query: 161 DARFMRRIRNGTVPN-VPNVEVTARQLDFLARELSSHPQN-LSDGQIRQGLSAMVQLLEH 218 D ++R + + ++ + ++ + ++ + + +S I L ++ L+ Sbjct: 185 DILEDIKLRFSNLGKMLSKIKYSDDDINEIESQIKTLNEKAVSSSPILSILKTNLKELDT 244 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRP----GGRSYRVILLGLFATLL 274 G G ++ + Y + N G RS+ +L L Sbjct: 245 AMDSHGEGIEITPFTKKIRDLNKGLTIYYNDQNESFPMENHGMGTRSWSSLLALKAFVFL 304 Query: 275 QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE 334 + + P+L IE+PE LHP + ++ + Q+I +T+S + S + Sbjct: 305 LSNNAMEKGTKFFPILTIEEPEAHLHPNAQKKLYEQIDSIVGQKIISTHSPSITSAARLS 364 Query: 335 HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN 394 + + +V ++ L ED R+I+ + R F++ + VEGETE + Sbjct: 365 QIRNFYKNE-KVTCGKIETDKLEPEDIRQINRQVTNTRGEIFFSKVLVFVEGETEEQALP 423 Query: 395 ELARQC-GHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 A + G+ I P ++FA + I W +L D + + K+ + S Sbjct: 424 IFAEKYFKKSPVEIGLDFIGVGGHPKYLPFLRFAEALNIPWLILSDAELSTKESVLSQFS 483 Query: 453 LLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPEN------------VPMNL 500 ++ + + D E + FS N Sbjct: 484 KCSSKKSDINCVVFLDDGNDFEKQLIADNFSVEIKSAISSSCNYMNGQHKKAKEKEIEKY 543 Query: 501 RKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRA 551 I SK +A + + D +P + +F ++ + + + Sbjct: 544 DDKKLYTIIMGSKTQYGPVIAEKIIQTDKD-LPPKVINLFRKIDAILKRKE 593 >UniRef50_Q469F9 Putative uncharacterized protein n=2 Tax=Methanosarcina RepID=Q469F9_METBF Length = 650 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 103/629 (16%), Positives = 206/629 (32%), Gaps = 93/629 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+++ + FR IN ++L L NV+IG N GK+SLLD+L L LS + Sbjct: 28 MYLKKIHVKNFRCINDINLELNSGLNVIIGANNSGKTSLLDSLRLALSIGNYSRSIYVSS 87 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + + I LTF E P DG H + + + Sbjct: 88 EDFFVDEFGKKSQTIEIDLTFSELTPED-----MGVFIEMLKVNDDGNHELELHVRYKRE 142 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG------TV 173 + +R + G + I + L ++ + LRD+ + G + Sbjct: 143 RKNGIEKIR--VRYWGGEKEANTIPIEVMELFYIVYLEALRDSENYLKPNRGNKLGQLFL 200 Query: 174 PNVPNVEVTARQLDFLARELSSHPQ-----NLSDGQIRQGLSAM---------------- 212 VP+ + + ++S+ + +I + L Sbjct: 201 KLVPDETAQEKHAQQIYESITSNEDWNELITDARKKINEHLENTTLEHDTLRIDIDFAPV 260 Query: 213 --------------------VQLLEHYFSEQG-----------------AGQARYRLMRR 235 +L+E+ F E+G + + Sbjct: 261 DFTKIAERLKIYIPILKKIKRELIENIFEEEGWEKYFEYPHSDKLILKTDIKELLKNEVN 320 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 + S I I + G +I + L + + + LLIE+P Sbjct: 321 SELKFKISKLEKFIQKFEIYQNGLGYNNLIYIATIIGDLIERVNRKSENYI--ALLIEEP 378 Query: 296 ETRLHPIMLSVAW---HLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG 352 E LHP + ++ + + +Q T++S + + T ++ V + Sbjct: 379 EAHLHPQLQNILFNYFKNIESKNIQIFLTSHSPTITAKTDIDTVILMENSFKVDILPLKD 438 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVI 412 D + + + + FA + VEG +E +++ ++ G + GI+V+ Sbjct: 439 IEFEDETDKKYLQRFLDVTKSQLFFANGVIFVEGISEAMLLHIFSKILGIDLEKNGIEVV 498 Query: 413 EFAQSGLKPLVKFAR------RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 KP K ++ + +L D DE+ K + +L + E + L Sbjct: 499 NIGGVAFKPFAKLFNSEHMDKKIKVRAAILSDDDESDGKISRRASNLNKLNSENLKVFLG 558 Query: 467 ALPALDMEHFMYRQGFSDVFHRM------AQIPENVPMNLRKIISKAIHRSSKPDL---- 516 + ++++ ++ + EN N ++ + K + Sbjct: 559 TKTFEYELFLLNGDLLTNLYKKLHPNFPQSNPQENTEKNADYLVKRLKSNKDKGEFSQLL 618 Query: 517 AIEVAMEAGRRGVDSVPTLLKKMFSRVLW 545 +E+ R VP ++K V+ Sbjct: 619 MMELIENEDTRNKFKVPRYIEKCVKWVVG 647 >UniRef50_D1NL89 SMC domain protein n=7 Tax=Bacteria RepID=D1NL89_CLOTM Length = 696 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 85/512 (16%), Positives = 163/512 (31%), Gaps = 60/512 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + +++I FR + NV+IG N GKS+L+ AL L+ + H E DD Sbjct: 4 MYISKIQIKNFRNFKQFEAHFNNGINVIIGHNNSGKSNLIKALALIFDSNTK-KHLEIDD 62 Query: 60 F--WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTD------------ 105 F + D+ + I +T + + T + Sbjct: 63 FNKYISLEDLKNEPPKISIAITITQQEDENLMSDDLVTISNWLTKLEEPYEALLTYEFML 122 Query: 106 ----------GYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP 155 + + E + + L ++ G PI+ + ++ Sbjct: 123 PVKEHERYKKKVNNLEKEEEIWEVINRDFLRLYTYKIWGGDPINKTVADSESLQKFDFQF 182 Query: 156 VLRLRD-ARFMRRIRNGTVPNVPNVEVTA--------------RQLDFLARELSSHPQNL 200 + +RD R M RN + +V + + ++ + R+ S NL Sbjct: 183 LNAIRDVERDMFTGRNTLLKSVLDFFIDYDIKSDKEKTEDEKLSEISEIKRKFSIDANNL 242 Query: 201 SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW------RYLDIINRMI 254 ++ ++L + ++ + Y S+ Q Y I + Sbjct: 243 IKSLQKRMEKGKKEILSYAYNIGASFDNSYPNFDGNISDVQLYSALSLIVEYKTGIKIPV 302 Query: 255 DRPGGRSYRVILLGLFATLLQAKGT---LRLDKDARPLLLIEDPETRLHPIMLSVAWHLL 311 G +I + L +Q L + P+L+IE+PE LHP M L Sbjct: 303 SHNGLGYNNLIFMALLLAKMQINSDGTYLGSNAKVFPILVIEEPEAHLHPSMQYQLLKFL 362 Query: 312 -----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF 366 Q TT+S + + ++ + L + + G + + + Sbjct: 363 NTNIKQNKVRQIFVTTHSTHIAASVSLDQMLCLYKYKNDTQIAYPGKVFPYEKSKKYVQR 422 Query: 367 HIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFA 426 + + LF+ +LVEG E +I AR + + VI + Sbjct: 423 FLDATKSDMLFSEKVILVEGIAEQLLIPIFARYLECPLEEKHATVINVGGRYFNHFLYLF 482 Query: 427 R-----RMGIEWHVLVDGDEAGKKYAATVRSL 453 + + L D D K+ + + Sbjct: 483 DENNPFAIKRKVACLTDRDPERKEKSQSRYKK 514 >UniRef50_Q74JQ3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=Q74JQ3_LACJO Length = 578 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 87/516 (16%), Positives = 163/516 (31%), Gaps = 30/516 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M++ RV I GFR + + L ++++IG N GK++ + AL LL + D Sbjct: 1 MLIYRVNIKGFRNYEDVDVYLNSSSLIIGSNNVGKTNFIYALRLLFDRNLSENDLDLLDS 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 F + + + L + T ++ + G S + Sbjct: 61 DFNAYSHSDK-VEITAYLKDINEECLLSEFKGNINEGKLILKYTKEKNQDYILQAGFSED 119 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + RS+L + + N LR R + + + + Sbjct: 120 TMQELKSRSYLRRLSMQYVDTNRNLYK----------YLRKERQNLLLNSQELLSEEQKN 169 Query: 181 VTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYRL-MRRRAS 238 + + + L+S + +S I+ L + + L E ++ Sbjct: 170 DDKTKTIEIQKNLNSINEKISSLNYIKNALENVNKELSSLSVENEDQNIQFVAGHNDAEK 229 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + G I L +A+ L+ D IE+PE Sbjct: 230 MLSDVALSYSSEEGPLTLGGDGRNNQIYLAT----WRARQELKAGPDHVTFYAIEEPEAH 285 Query: 299 LHPIMLSVAWHLL-NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 LHP L L Q I T++S ++ + E++ RL + A Sbjct: 286 LHPHQQRKLAQYLTKSLKGQVIVTSHSPQIAEIFKAENIVRLYFHNKYTEAASGPNDAQI 345 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 ++ + F+ LVEG +E LA++ G D I ++ Sbjct: 346 KNSFNAFNYRLNTLSAEVFFSYGVFLVEGVSEVIFYKALAKENGIDLDRLNISILAVEGI 405 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 G KP + + I W + D D + N E + + E + Sbjct: 406 GFKPYINICNALSIPWVLRTDND------------IFKNREEKYYAGIKRAVGIIKECKL 453 Query: 478 YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSK 513 + S+ + + N K ++A+ +S K Sbjct: 454 DYKKPSECDKACEKWHCDTIPNDIKNNNEAMRKSLK 489 >UniRef50_D2LS06 ATP-dependent endonuclease n=2 Tax=Bacillus RepID=D2LS06_BACS4 Length = 669 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 83/497 (16%), Positives = 158/497 (31%), Gaps = 62/497 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHFERDD 59 + RV+I FR + ++L V+IGEN GK++ L A+ ++L P + + D Sbjct: 8 YISRVKIKNFRNYKDVDVVLSHKQVIIGENNVGKTNFLRAIQIILDPKLSDEDRYLNESD 67 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ D I E H L ++ R+ Y + Sbjct: 68 FFDGLVDPMKNGDE---IEIIIEIKGFEHNKSLLSMLADATIRASEPVIRLTYHYFPVTN 124 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 +G + + + + + +L +++ +R +A R+ + Sbjct: 125 INGKYEYEYTIFQGEKTEVAFNHSHRKYLNL-KVINAIRDVEAELKNIRRSPINQLLKQY 183 Query: 180 EVTARQLDFLARELSSHPQNLSD--------GQIRQGLSAM------------------V 213 ++ +L ++ +L ++ QI + S + Sbjct: 184 KIDKDELVEISNKLKQQSNDILTIDELVDLQTQINKRFSNVLGNQPYSKIALETVDVDPN 243 Query: 214 QLLEHYFSEQGAGQARYRLMRRRASNEQR---------------SWRYLDIINRMIDRPG 258 ++L G + R N S D + +I Sbjct: 244 RILNTLKLMIGIEKQRPTSETSLGLNNILYISLILLSLEDKTIPSLIKKDTYDELILENE 303 Query: 259 GRSYRVILLGLFATLLQAKGTLRLDK---------------DARPLLLIEDPETRLHPIM 303 + K L + + IE+PE LHP Sbjct: 304 SDILTLCYEKTEKENYSLKQDLNEQNLIDLYSFMDTNHSSTEGFTIPAIEEPEAHLHPTF 363 Query: 304 LSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRR 363 + + + + TT+S + S+ P++ + L + L+ + R Sbjct: 364 QRIIYKDVMKKNTSVLMTTHSPYITSVAPLDSIVHLRATNQGTVVHSTATIELTDGERRD 423 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 + +I + F + +LVEG E ++I A D +GI + KP V Sbjct: 424 LERYIDVKKGEIYFGKGVILVEGIAEEYLIPAFADLLEKPLDLKGIICCNINSTNFKPFV 483 Query: 424 KFARRMGIEWHVLVDGD 440 KF +GI + L DGD Sbjct: 484 KFLDLLGIPYVALTDGD 500 >UniRef50_B5V0C9 ATP-dependent endonuclease of the OLD family n=1 Tax=Bacillus cereus H3081.97 RepID=B5V0C9_BACCE Length = 696 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/532 (14%), Positives = 157/532 (29%), Gaps = 45/532 (8%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +V+I FR ++ LE +IG N+ GK+S AL L S R D Sbjct: 1 MKLTKVKICNFRSFHKERTIDLEDFTSIIGSNSSGKTSFFQALLKLFGETSREREILRSD 60 Query: 60 FWFPPGDI----NGREHHLHIILTFRE--SLPGRHRVRRYRPLEACWTPCTDGYHRIFYR 113 F P + + + F E S + I R Sbjct: 61 FHVPSHIDPNALTENHFFIDVTIEFPEVISEDSIAKSTVPPFFGNFIIEEGGKAPYIRIR 120 Query: 114 LEGESAED----GSVMTLRSFLDK-DGHPI---DVEDINDQARHLVRLMPVLRLRDARFM 165 E + G + + F+ G+ I + I+ L++++ + LR+ Sbjct: 121 QEATWQKSNQPEGIIESNVFFVTIGHGNEILDVHKKMISKAYLSLIKMIYIPALRNPNDQ 180 Query: 166 RRIRNG--TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAM-VQLLEHYFSE 222 ++ +G + + + + ++ ++ S + + + L + + Y +E Sbjct: 181 LKMVSGTLLWRLINRINFEDQFKEDISDQIGSIHEIIDKQKGLSKLKEIIRTEWKKYHNE 240 Query: 223 -----QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + + N +D G + L +LL+ + Sbjct: 241 SRYVNVDLNFNTNNIEDILKKIDANFSPTEVGKNYTVDALGDGLRSLFYFSLVGSLLKTE 300 Query: 278 G-----------------TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PL 316 T L+ +E+PE + P +L L + Sbjct: 301 EVTLMEISDNPSLDINDRTFSNTPPLLTLIAVEEPENHVAPHLLGKIVSNLRGISEGGNS 360 Query: 317 QRIATTNSGELLSLTPVEHVCRLVR-ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSS 375 Q I +++S ++ + + D + + P Sbjct: 361 QVILSSHSASIIKRVDPVEIRHFRNSKEDLGTVINKILLPSKEADEYKYVKEAVKSYPEI 420 Query: 376 LFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHV 435 F+ +L EG++E +I + C I ++ + K ++ I + Sbjct: 421 YFSSLVILGEGDSEEIIIPRILEDCDLDIHTHEISIVPLGGRHVNHFWKLLTQLKIPYIT 480 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFH 487 L+D D + + L L + +++ Sbjct: 481 LLDLDIERHGGGWGRIKYVIDQMLLNGTSTEELFHLKEDQTFDLNTIKGMYN 532 >UniRef50_C7NT09 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NT09_HALUD Length = 529 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 96/551 (17%), Positives = 184/551 (33%), Gaps = 32/551 (5%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + + ++ I +L + N++IG+N GKSS+L+A+ LLL ++ + DF Sbjct: 1 MRISSFSVRNYKAIKEQTLEFGEYNIIIGKNDVGKSSVLEAIDLLLKFDTPD----KSDF 56 Query: 61 W--FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 I I T +E L + + A +T + Y + GE Sbjct: 57 HMLDESNTIILCCEFEEISDTLKEMLTDDYLDGDNLSITARYTSSSGRTPDGLY-INGEE 115 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARH-LVRLMPVLRLRDARFMRRIRNGTVPNVP 177 E G++ D + D + + L + VL RD + G+ Sbjct: 116 IESGAIQ-------IDEEELSKSDSREYIKEQLSETVTVLAERDHESETSLTQGSWLTRV 168 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 V + L+ Q + ++ L + L S+Q + ++ Sbjct: 169 MSPVFSS------DNLNEQKQKI-RSELEDELEEIKASLNEVLSDQHSHINDVQIELGDI 221 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + +++ + +D S R +G L K + D +L E+PE Sbjct: 222 DLSKAVSPKIEVRDDNVDEWMPLSERGSGVGNQFILSMMKSYADSELDDGYYVLYEEPEN 281 Query: 298 RLHPIMLSVA---WHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 LHP + + Q I TT+S L+ + + + Sbjct: 282 SLHPSAVREMDQALREIASQGNQVIITTHSQSLIDTHENGSLIVASNDDGEAEFKHVKDD 341 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF 414 G ++ I L + L EG ++ VI + + +D + V Sbjct: 342 GFEAIEA------IGAKNSDILQSDYVLYTEGASDAAVIEVICQHEFDDWDGINVTVQPA 395 Query: 415 AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS-LLNNDREAEREHLTALPALDM 473 L+ ++ + + +L+D D + +S LL ++ + L ++ Sbjct: 396 GGGNLRHQLENMKHINRNSGILIDSDRTSEGGELGDQSALLVDEADRIDLDRWVLERREI 455 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVP 533 E++ + DV I I+ + K A ++A GVD Sbjct: 456 ENYFHADAIEDVLEVSESINIGHYDEAEDILEDYNYDDGKVQNARDIAQVMYEIGVDDEF 515 Query: 534 TLLKKMFSRVL 544 + LK + Sbjct: 516 SDLKSIVEEAF 526 >UniRef50_B1I298 ATP-dependent endonuclease, OLD family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I298_DESAP Length = 663 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 101/669 (15%), Positives = 192/669 (28%), Gaps = 130/669 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M++ V + FR I SL ++ L+G N GKSSLL AL L P + +DF Sbjct: 1 MLISAVHVKNFRSILDDSLPCDRLTALVGRNGAGKSSLLRALELFYDPSAK---VTTEDF 57 Query: 61 WFPPGDINGREHHLHIIL--------TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 + + ++ + + F + + R + YH + Sbjct: 58 Y---AEDTSQDIEIAVTFAELSTEEQDFFSAYIDNGTLTVVRVFSLAPGRKSGTYHGMRL 114 Query: 113 ---------------RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQ----------- 146 + + E S S + + + Sbjct: 115 QNPDFAEVRTAGGRREITNKYNELRSTEKYSSLPTVRSADEALSKLQEWESANPNACVRM 174 Query: 147 ----------------ARHLVRLMPVLRLRDARFMRRIRNGT----------VPNVPNVE 180 R + + +RDA R G+ + + Sbjct: 175 RDDGQFFGFTEVGQGYLGRHTRFIRIPAVRDASEDAMERRGSCVTEIMDLVVRSALARRK 234 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 A + + ++ + + + L+ Y E Sbjct: 235 DIATFKEETQAKYRDILDPAKLSELTGLQAQLSKTLKQYAPEADVSLRWAEFADINIPMP 294 Query: 241 QRSWRY-LDIINRMIDRPGGRSYRVILLGLFATLLQAKG----------------TLRLD 283 + + D + R G R +L + L+ A+ Sbjct: 295 EAQVKLVEDGYESSVLRTGHGLQRAFILTMLQHLVAAREMKKTMEEGFDSKEQSSEAEEP 354 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELLSLTPV 333 +L IE+PE HP +L L Q I +T+S + L Sbjct: 355 YLPGLVLAIEEPELYQHPSRQRHLASVLVKLATGTIPGVAKKTQVIYSTHSPLFVGLDRF 414 Query: 334 EHVCRLVRES------SRVAAWRLGPSGLSTEDSRRISFHIRFNRPS------------- 374 + + L ++ + ++ E Sbjct: 415 DQIRLLRKKDVGAGKPKVTEVVKANLEAVAEELWDACGRQGVKYTSETLRPRLQAIMTPW 474 Query: 375 ---SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARRMG 430 FA +LVEGE + I +AR G+ FD+ I VI L + RR+ Sbjct: 475 VNEGFFADVVVLVEGEDDRAAILGVARAMGYDFDSANISVIPCMGKPNLDRPLVIFRRLR 534 Query: 431 IEWHVLVDGDEAGKKYAATVRSLL-----NNDREAER--EHLTALPALDMEHFMYRQGFS 483 I +V+ D D + L + + E A + +E + + Sbjct: 535 IPVYVIWDSDYGERDPKPESNRYLLRLLGQAEEDWPNIVEDWYACFEVKLEATIAEEIGQ 594 Query: 484 DVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 ++F+++ +N I K H P + ++ +A G +S+ LK + ++ Sbjct: 595 ELFNQLLSQAQN-----ELGIPKKEHALKNPVVLQQIVEKAAAEGKESI--SLKGIVQKI 647 Query: 544 LWLARGRAD 552 + L + + Sbjct: 648 IALKSRQEE 656 >UniRef50_C2I056 Putative uncharacterized protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2I056_VIBCH Length = 663 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 82/549 (14%), Positives = 163/549 (29%), Gaps = 83/549 (15%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ V I +R + +S ++ + +++G N GK+S +A L+P + +D Sbjct: 1 MKIKNVRIKNYRLLKDVSFSIDEKTTLIVGRNNTGKTSFAEAFRSFLNPAGPKVRY--ED 58 Query: 60 FWF---------------PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 F D R I L + + Y L Sbjct: 59 FNQSCLTGFEDALNALQGGAEDDVVRSMLPTIELELLINY--QDNADEYGVLGDFIIDFD 116 Query: 105 DGYHRIFYRLEGESAED---------GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP 155 D + + + SV + F D + N A L Sbjct: 117 DQLFETIILISYQLKDGKISEFLGGLDSVNRKQYFADLRSRIGLHYEANVYAVEPTNLNN 176 Query: 156 VLRLRDARFMRRIRNGTV---PNVPNVEVTARQL------------------------DF 188 RL + F + + +G + + + R + Sbjct: 177 KARLEFSSFKKLLLSGLINAQRGLDDETHNERDVLGKSLGHIFKSASSVGAPEAFKAQSA 236 Query: 189 LARELSSHPQNLSDGQIRQGLSAMVQLLEHY-----FSEQGAGQARYRLMRRRASNEQRS 243 + Q + D +Q + A++ L + + + S+ + Sbjct: 237 EINTVVEELQEIVDTDFQQKVQALLPTLNIFGYPGLHDPNLSAATELNVKSLLESHTRVF 296 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 ++ D G +I + + ++ IE+PE LHP M Sbjct: 297 YQRDDHFTLPETYNGLGMRNLIFILFRIYEYFREFQSHQTPPKGHVIFIEEPEAHLHPQM 356 Query: 304 LSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVC-RLVRESSRVAA 348 V L + P+Q I +T+S + + V L + + Sbjct: 357 QEVFIRQLEQIVEQFQRELNDQQVWPVQFIVSTHSSHIANEADFSKVRYFLSKNGNETKV 416 Query: 349 WRLGP---SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ----CG 401 LG S + D + ++ + FA +LVEG TE ++ ++ ++ G Sbjct: 417 KDLGVAFQSEEAAGDREFLHKYLTLTKCDLYFADRAILVEGATERILLPQMIKKVDVALG 476 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 + + + V+E + KF + ++ + D D K + DR + Sbjct: 477 TNLRQKYLSVVEIGGAYAHHFYKFIDFLELKTLFITDLDAVNSKQHHAAVMVSQGDRSSN 536 Query: 462 REHLTALPA 470 Sbjct: 537 VGISKWYGE 545 >UniRef50_A6AAK9 RecF/RecN/SMC N domain protein n=1 Tax=Vibrio cholerae 623-39 RepID=A6AAK9_VIBCH Length = 617 Score = 207 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 78/483 (16%), Positives = 175/483 (36%), Gaps = 38/483 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYHFERD 58 M L +++ FR +L + N+L+GEN GK++++D++ +L+ +S + + Sbjct: 1 MYLHCLKLENFRRYKQLEVEFNSGLNLLVGENDSGKTAIIDSIKYVLNTQSYEYLRPCIE 60 Query: 59 DFWFPPG-DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF+ P D + R I F+ + + + + + Sbjct: 61 DFYLDPTQDESHRSSEFRIECVFKGFDKEEAK-----HFIDWIGTDDEKNYFLKIWMCAS 115 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 D +R+ D +G ++ + AR L+R + LRDA + G+ + Sbjct: 116 RKNDRVFYDVRAGSDDEGSQVNGD-----ARDLLRATYLKPLRDAESELTPKKGSRLSQI 170 Query: 178 ------NVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEHYFSEQGAGQARY 230 +L + + + ++ L+ + LE++ E +R+ Sbjct: 171 LYNHEVFANEEDNRLLRIMSLTNKAIEKFFTHYDGKELLTDVNTYLENFSLENNKLNSRF 230 Query: 231 R--LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 ++ E+ S + + + G S+ ++ + LL+ + + Sbjct: 231 NVSDSSLKSVLEKLSLKLFNQSVSENNNQGLGSHNLLYIAAELLLLK-----KSNYQGLK 285 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESS 344 L LIE+ E LHP + + +Q I TT+S L S ++++ + Sbjct: 286 LGLIEEIEAHLHPQTQIRLIEAIQKISEENKIQLILTTHSTSLASKVKLQNLVLC--KDG 343 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 + + L D + + + + FA +LVEG+ E ++ A++ G Sbjct: 344 CLYPMGKEYTKLREGDYLFLERFLDSTKSNLFFANGVILVEGDAENILLPSFAKKLGFDL 403 Query: 405 DAEGIKVIEFAQSGLKPLVKFA-----RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 G+ ++ + +++ ++ ++ D D Y + E Sbjct: 404 SQYGVSIVNVGSTAFLRYANIFLRKDNKKLNLDISLITDVDVKPFIYEPKQTKEKTIEGE 463 Query: 460 AER 462 + Sbjct: 464 KTK 466 >UniRef50_C5VAS3 RecF/RecN/SMC domain protein n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=C5VAS3_9CORY Length = 679 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 92/480 (19%), Positives = 170/480 (35%), Gaps = 42/480 (8%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNV-LIGENAWGKSSLLDALTLLLSPESDLYH-F 55 M L ++ + FR + L + + V L G N GK++++D + LL Y F Sbjct: 1 MYLSKLTLKNFRQFSEEDPLEVDFQPGVVALAGPNDSGKTAIIDGIRYLLRTRDQDYQLF 60 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLP-GRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + DD++ P + + +I R+ P+++ T TD + L Sbjct: 61 QDDDYYISPNNEQANYFTISVIFEDLSCEDRARYLEYLTYPIDSSGTRKTDEDVILQLTL 120 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF-MRRIRNGTV 173 E ++G+ + L + + ++ + R+L+ + LRDA M RN + Sbjct: 121 RVEKKKNGNRFWNDAKLYCGSEALVGKIVDSETRNLLACTYLRPLRDAEHEMSSGRNSRL 180 Query: 174 PNVPNVEVTARQLDFLARELSSHPQN------------------LSDGQIRQGLSAMV-Q 214 V + + + N + I++ + + Sbjct: 181 SQVLKQFPSINDGEKIINGYIPTSDNELRELSLSGLSDLLKILINDNNSIKEATDELNQK 240 Query: 215 LLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL 274 L + + + + + + + G LG L Sbjct: 241 HLTNLILRNESITGEFTFTTGATDDAKLQQVLEQLDLTLKGSEGQSDRGRFGLGSNNLLF 300 Query: 275 QAKGTLRLDKD--ARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PLQRIATTNSGEL 327 A L + K PLLL+E+PE LHP L +Q I +T+S L Sbjct: 301 IACELLLIAKGDIGFPLLLVEEPEAHLHPQRQLQLLEYLLEQAEGTSKIQVIISTHSPIL 360 Query: 328 LSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 S VE++ + + + G + LS D +S + + + FA ++VEG+ Sbjct: 361 TSKVKVENIILV--NHGKAHSLAKGKTQLSNNDYSFLSRFLDVTKSNLFFAENLIIVEGD 418 Query: 388 TETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRM-------GIEWHVLVDGD 440 E +I +A+ G+ GI +I GL+ + +R GI + D D Sbjct: 419 AEELLIPVIAKLIGYDLTKHGISIINVGGVGLRRYSRIFQRKDENAQPVGIRVSNITDRD 478 >UniRef50_B1R009 Putative uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R009_CLOBU Length = 662 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 84/562 (14%), Positives = 185/562 (32%), Gaps = 69/562 (12%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFERDD 59 + +V + +R ++ L V+IGEN GK++ + AL L+L P + ++D Sbjct: 5 YISKVILKNYRNFKDCTVNLSHKGVIIGENNVGKTNFIKALQLILDPSLSEETRCLSKED 64 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ D + I + + + V + +A + +I Y+ + Sbjct: 65 FFDGLEDPFENNLEIIIEVFLSDYEENGNIVAQLD--DATVNDDGEKKLKITYKYYPIES 122 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 ++G++ + D + + + ++++ +R + + + N Sbjct: 123 DNGNIDYGYTIFKGDNEEYKFTYEDRKYLN-IKVIKAIRDVEREINNSRNSPLNRLIKNY 181 Query: 180 EVTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 + +L +A LS + ++ +I + + + + M Sbjct: 182 CIEKNELKQIADNLSENSADILQLDEILDISKNLNNSFSNIIGLDNDLEVSLKTMNIDP- 240 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT-------------------------- 272 N+ + + + NR + ++ + L Sbjct: 241 NKILNSMKIMLANREAEDVSLGLNNLLYISLMLLSIKDNTIPTFLKKDRYEKLLQCDGSD 300 Query: 273 ---------------------------LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLS 305 L + +L+IE+PE LHPI Sbjct: 301 ILSKSYEKNKKENYFLKDNLLEEGEKELYKFMDENDPSDGGVTILVIEEPEAHLHPIYQR 360 Query: 306 VAWH-LLNLLPLQRIATTNSGELLSLTPVEHVCRL-VRESSRVAAWRLGPSGLSTEDSRR 363 + + ++ I TT+S + ++ ++ + L R S LS + Sbjct: 361 LIYKDVIKKNDNSVILTTHSTHITAIADIKSIVHLHKRNSGETEINTTASLDLSGPELLD 420 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV 423 + ++ R + +LVEG E ++I + A G D GI V + KP V Sbjct: 421 LERYVDIKRGEIYLGKGVILVEGIAEEFLIPKFAEIMGKSLDEIGIIVCNINCTNFKPYV 480 Query: 424 KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFS 483 K ++ I + V+ DGD K + D +E E+ ++ + Sbjct: 481 KLLMQLDIPFTVITDGDFYIIKEGEDKKQFHVLDSISEDEYEKC-------GYLGIENIE 533 Query: 484 DVFHRMAQIPENVPMNLRKIIS 505 + + + +P ++ K Sbjct: 534 TLVKDLRLTSKQIPADISKKDE 555 >UniRef50_C2PGZ2 Putative uncharacterized protein n=1 Tax=Bacillus cereus MM3 RepID=C2PGZ2_BACCE Length = 592 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/545 (13%), Positives = 159/545 (29%), Gaps = 56/545 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E ++I GFR + ++ + ++IG N GK++L+ AL LL D Sbjct: 1 MKIEWIKIKGFRNFDNETINFAEQTLIIGANDIGKTNLIYALRLLFDRSLSDRDL---DL 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 ++ + + I + + + Sbjct: 58 LSSDYNVYTKADSIEITVKLVDVKED-----------------------CLITVFKGDLN 94 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 +G+V + I + + RL + + Sbjct: 95 EGTVYIQYKNSKNGEYSILSGPSEEAVEIKNSRFYIKRLNMEYVNTNRNLESFMKREKNQ 154 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 + L + + + S +I++GL + + ++ Q + + A + Sbjct: 155 ILEDAKLKLTEQQTQMDEQ-SIFKIKRGLEVVNKRVDRLNYIQQSLSKVNEELGSLAIHN 213 Query: 241 QRSWRYLDIINRM-------IDRPGGRSYRVILLG-------LFATLLQAKGTLRLDKDA 286 + N ++ + LG +F +K + Sbjct: 214 ESQELSFKNANSDAARMLDNLELTYSTQEGALTLGGDGRNNQIFLATWISKQKNIKSLEK 273 Query: 287 RPLLLIEDPETRLHPIMLSVAWH-LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 IE+PE LHP LL Q TT+S + S + + +L + Sbjct: 274 VTFYAIEEPEAHLHPQQQRKLSSYLLEKFDEQVFITTHSPHIASEFKPDRIVKLYSKKKC 333 Query: 346 VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 + G S D + + F L+EG +E LA+Q D Sbjct: 334 TKVAKGGCSEEIKLDFDDFGYRLDAITSDVFFVNAVFLIEGPSEKLFYTALAKQLDIDLD 393 Query: 406 AEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 + +I G KP +K + I + + D D K + + + + + Sbjct: 394 RLNVSIISVNGIGFKPYIKICLALDIPFVLRTDNDIFSKTKKIEEKDVEFSFQGGISRVM 453 Query: 466 TALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAG 525 ++++ A ++ ++ + ++P A +A Sbjct: 454 GI--------------YTELLQTEANQSLITYWGEHEVENEWLKNETRPQAASNLAEYII 499 Query: 526 RRGVD 530 R Sbjct: 500 RETEK 504 >UniRef50_C3B2Y6 Putative uncharacterized protein n=2 Tax=Bacillus cereus group RepID=C3B2Y6_BACMY Length = 707 Score = 205 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 85/577 (14%), Positives = 199/577 (34%), Gaps = 52/577 (9%) Query: 1 MILERVEIVGFRGIN-------RLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDL 52 M L+ + + FR +++ L NVL+GEN GK++++D + LL SD Sbjct: 1 MYLKSISLYNFRQFGINDDGSPGITVHLNPKFNVLVGENDSGKTAIIDGIKYLLGSVSDD 60 Query: 53 Y-HFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 Y ++DF+ D+ + + I T R + + + Sbjct: 61 YEKISQEDFFSLSKDVYSDQFFIEGIFT-------ELSDREAGAFLEWLSFDAQNNYTLR 113 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR-IRN 170 L E ++ + G ++ +AR++++ + LRDA + Sbjct: 114 IILRVEKRKNENGTEFIDRKLLAGEKDFESRLDSKARNVLKTTYLKPLRDAGSELKPGFR 173 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA-------MVQLLEHYFSEQ 223 + ++ T + ++ L ++ +I + ++ +E+ S+ Sbjct: 174 SRLVHILKAHPTFKGIEEQNHRLVE-VMKAANEEIEKYFENEYTDGHSLINDIENLLSDF 232 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + + + A + L ++ + + LL + LL + + Sbjct: 233 YDNLDQSKSKAKFAVTQTDLTSILRKLSLNTEDVNLGLGNLNLLFIATELLLLNNYMAGN 292 Query: 284 KDARP-LLLIEDPETRLHPIMLSVAWHLLN------LLPLQRIATTNSGELLSLTPVEHV 336 + P + LIE+ E LH L Q I T++S L++ +++ Sbjct: 293 ELIGPKITLIEEIEAHLHTQAQIRLIKFLESELEGEENKSQFILTSHSSNLVASVDPKNI 352 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 L + + + + L D + + + + + FA+ +LVEGE+E ++ L Sbjct: 353 ILLHNQKAYPLNEQY--TMLDENDYKFLERFLDSTKSNLFFAKGIILVEGESEMLLLPAL 410 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR------------RMGIEWHVLVDGDEA-- 442 A+ G+ G+ ++ + + +K + I ++ D D Sbjct: 411 AKLIGYPLHKSGVSIVNVRGTSFERYIKLFSRSVLWKTQMQLPALDIPISIITDIDIKPY 470 Query: 443 -GKKYAATVRSLLNNDREAEREHLTAL---PALDMEHFMYRQGFSDVFHRMAQIPENVPM 498 + +S+ N + E + + + P +++ +S + V Sbjct: 471 IYYEVEERDKSIFNIESEIQLDTILHCISEPKEELKLDYIGNDYSTLKKLAKDFGFKVTD 530 Query: 499 NLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTL 535 ++ I + D +++ + + Sbjct: 531 ENEVELTSLIKKDITRDYLSQISEDKRKNFKQQYSIY 567 >UniRef50_C2MCD2 RecF/RecN/SMC N domain protein n=2 Tax=Bacteroidales RepID=C2MCD2_9PORP Length = 680 Score = 205 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 87/539 (16%), Positives = 158/539 (29%), Gaps = 66/539 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ ++I+ FR + E NV+IG N GKS+LL A+ L+L D Sbjct: 1 MYIKEIKILNFRNFKEALIPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYNYGHRLGVSDL 60 Query: 60 FWF-PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT-DGYHRIFYRLEGE 117 F+ + + + I L R S T + Y + Sbjct: 61 FYETDLAVLQQQSPRIQITLLLRRSAGEALDSAEMGLFSNMMTDPELSEEAELRYEFKLT 120 Query: 118 SAE---------------------DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPV 156 AE D + L G+ IN+ + + Sbjct: 121 DAEEDNYKSDVANATTAKEIWKIIDHDYIRLYRTSRLGGNQAAGISINETLMQ-IDFQFL 179 Query: 157 LRLRD-ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL---------SDGQIR 206 +RD + + N + +V N + + + L + Sbjct: 180 DAIRDVSHDLYAGYNPLLRDVLNFFIDYSVKNDSTKTEDEIKGQLKTLRDGFVQQSSPLM 239 Query: 207 QGLSAMVQLLEHYF-----------SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMID 255 Q L +Q ++ F + + + +Y D I Sbjct: 240 QTLQDRLQNGKNVFLKYALDTGATFNGAVPDFDGTVTENEMFAVLRMIIKYADGIEVPAT 299 Query: 256 RPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL---LIEDPETRLHPIMLSVAWHLLN 312 G +I + L +QA ++ K +L +E+ E LHP M L Sbjct: 300 YNGLGYNNLIYMSLLLARMQADSSITYMKRNAKILSFLAVEECEAHLHPAMQYKFLQFLQ 359 Query: 313 LLP-----LQRIATTNSGELLSLTPVEHVCRLVRE--SSRVAAWRLGPSGLSTED---SR 362 Q T++S ++ S ++ + L + +D R Sbjct: 360 DNNANGHVRQIFITSHSTQIASAVKLDDLICLTSPALGQINVGYPRDIYKEDNDDVESKR 419 Query: 363 RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL 422 + + + FA + VEG E ++ AR + E + VI K Sbjct: 420 YVQRFLDATKADMFFANKLIFVEGIAEELLLPVFARYLDKNLTDEHVLVINMGGRYFKHF 479 Query: 423 VKFAR-----RMGIEWHVLVDGDEAGKKY--AATVRSLLNNDREAEREHLTALPALDME 474 +K + + L D D KK+ + + + ++ D E Sbjct: 480 LKLFDTNNPHTINKKIVCLTDIDPCRKKHGSDEAYEACYPYEYNIDADNYDYKHHADTE 538 >UniRef50_C3HBD5 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3HBD5_BACTU Length = 596 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 93/594 (15%), Positives = 197/594 (33%), Gaps = 81/594 (13%) Query: 22 EQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERDDFWFPP-GDINGREHHLHIIL 78 E +++IGEN GKS+ L+AL L+ + + E++DFW E + +I+ Sbjct: 3 EGLSIIIGENNGGKSNFLEALNLIFNNNYSIRKRTLEQEDFWNGLVIKDTWPEIVIEVII 62 Query: 79 TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGS-------------VM 125 + R W T ++ Y+ + + Sbjct: 63 KGINNEDELAITSR-------WLTRTPSEAKLTYKFRPKMGIKTVAPSKPTSISKICLPI 115 Query: 126 TLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV-PNVEVTAR 184 ++ G ++ + + + V LRDA + +G + + + ++ + Sbjct: 116 EEYEWVIYGGEQETLDAFDFNMLNKFGVEYVGALRDATTDLKKSSGQLHRILKHYDIAEK 175 Query: 185 QLDFLARELSSHPQNLSDG-QIRQGLSAMVQLLEHYFSEQGAGQARYR---LMRRRASNE 240 L+ +A +L + + G +I +++ LE + Sbjct: 176 DLEAIADKLDKLNEQIEKGKEINTVQTSINTYLEKITGVTKQQVKIKMGESNYDTLLKDL 235 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA--RPLLLIEDPETR 298 + S + +++ G ++ + L + + K PLL++E+PE Sbjct: 236 KLSIGSNEDELHSVEKNGLGYNNLLYISLLLSQYTTVKEKKASKHDYLFPLLIVEEPEAH 295 Query: 299 LHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP--- 353 LH + Q I TT+S + S ++++ + + R+G Sbjct: 296 LHSHLQKFLADYFFKQKVIGQVIMTTHSSHVSSHGELDNLILFYKNKGNTLSKRIGTIFD 355 Query: 354 --SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAEGI 409 E R + + + + F R LLVEG E +I + + G + E I Sbjct: 356 ERKKEQREHKRYLERWLDATKSNIFFGRKVLLVEGIAERLLIPKFFQMLYEGKTLEGENI 415 Query: 410 KVIEFAQSGLKPLVKFAR--RMGIEWHVLVDGDEAGKK-YAATVRSLLNNDREAEREHLT 466 +I +P + + ++ VL D D A ++ + + + + + +E + Sbjct: 416 SIISVDGVAFRPFLHLFNPLALDMKCSVLTDSDPAKVPVLNSSNQEVKDKNGDVIKEAVY 475 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII---------------------- 504 + D QG D F+ ++ I + + Sbjct: 476 PVKKEDCAVCDRTQGLIDDFNSLSNIQIFNNLKTFEYDLMLENNTGFFEELIIKHNVGTK 535 Query: 505 ---------------SKAIH--RSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFS 541 KA + K D + + E G+ ++P+ +K F Sbjct: 536 ADRESIAELEGAVFAKKAYEVISNEKGDFSQLILDELNEGGILNIPSYIKCAFE 589 >UniRef50_A1TJY9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1TJY9_ACIAC Length = 712 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 94/507 (18%), Positives = 167/507 (32%), Gaps = 69/507 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++ +V +R L+ ++ N +IGEN GK++L A+ LLL Y E Sbjct: 1 MHISKLSLVNYRNFANTKLLFQKGINTIIGENGSGKTNLFRAIRLLLDDNMIRSAYRLES 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG----------Y 107 DF G + H + I L F E +R G Sbjct: 61 TDFHRGLGRW--QGHWIIISLEFEEISADEAVQALFRHGTGGIDDEAIGKATYNLIFRPK 118 Query: 108 HRIFYRL-------------------------------------EGESAEDGSVMTLRSF 130 I RL E E F Sbjct: 119 KEIRLRLSQLDDGDHAGLAAILNPVTLDDYETIFTGRSDADFNDEAFYKEVVGDFEKARF 178 Query: 131 LDKDGHPIDVEDIND--QARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDF 188 ++ P I + V LRD N T P + ++ + +D Sbjct: 179 NEEIEFPAIGAKIPSVLSVSKEISFTFVQALRDV-VSEFHNNRTNPLLSLLKGKSGDIDP 237 Query: 189 LARELSSHPQNLSDGQIRQ--GLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 +A +L + + I + + + + + ++ + + Sbjct: 238 VAFQLITDGVKALNDSIEALPDVQVVRSDISDTIKDAAGEAYSPSSLSIKSDLPDEADKL 297 Query: 247 LDIINRMIDRPGGR--------SYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + + G S L L + + LLIE+PE Sbjct: 298 FQSLKLFVGESGEGHEGPIHELSLGGANLIFLTLKLLEFKYQKAKQSIANFLLIEEPEAH 357 Query: 299 LHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST 358 +H + + L Q I +T+S + ++ V++V L RE R A++ +GL Sbjct: 358 IHTHIQKTLFDRLQYDDTQIIYSTHSTHISEVSNVQNVNILGRERDRCEAYQ-PSTGLGP 416 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ-CGHHFDAEGIKVIEFAQS 417 E+ I ++ R + LFA+ +LVEG+ E +I L ++ G D GI +I + Sbjct: 417 EEIGNIQRYLDAVRSNLLFAKSVILVEGDAEEILIPILVKKVLGISLDELGISLINIRST 476 Query: 418 GLKPLVKFA--RRMGIEWHVLVDGDEA 442 G + + R+ ++ D D++ Sbjct: 477 GFQNVAVLFHDDRIRKRCSIVTDLDKS 503 >UniRef50_C6LLY5 Putative uncharacterized protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLY5_9FIRM Length = 663 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 87/539 (16%), Positives = 174/539 (32%), Gaps = 74/539 (13%) Query: 1 MILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSP--ESDLYHF 55 M L+++ I FR + + + L + N +IGEN GKSS++DAL ++ S F Sbjct: 1 MYLKKLIIKNFRIFDEMGIELIFNKGVNAIIGENNSGKSSVIDALRIVYSTVTYRKDIFF 60 Query: 56 ERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRR---------YRPLEACWTPCTDG 106 + DF + L + + E P Sbjct: 61 SKSDFHVCEDGTVVDYTQFDVYLEDVPRRMTEIWNPQSESGMGGDFHIKFEKYIAPNGTE 120 Query: 107 YHRIFY--------RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 R Y +L ++ E V+ L + D + + + A+ L L+P Sbjct: 121 KVRSVYWGFGTEGNQLSSDTFEATDVVFLGALRDSESE-MKPSRNSKLAQLLRNLVPEEA 179 Query: 159 LRDARFM-RRIRNGTVPNVPNVEVTARQLDFLARELSSHP--QNLSDGQIRQGLSAMVQL 215 +R+ N + ++ T ++ + Q + G + ++ Sbjct: 180 VREELVQILNNANNDLLKKEQLKKTRNTINQNLARIEQEFLNQQIDIGLVEPRFDSIASS 239 Query: 216 LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRM---------------------- 253 L + + + + A +S L I Sbjct: 240 LRAWVKPKWILINKEDAVYETAHTYFQSNMDLKKIQDDAKGIYFEISILDSETELDKKVA 299 Query: 254 ------------IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHP 301 + + G ++ + + + + LLL+E+PE LHP Sbjct: 300 DRISEIANKSFELYQNGLGYNNLLFMSAVLGDMA----IERGGVYQNLLLVEEPEAHLHP 355 Query: 302 IMLSVAWHLLNLLP-----LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGL 356 + + L+ +Q I T++S L S ++++ L + + L Sbjct: 356 QLQELVHDFLSDANKNDGNIQIIYTSHSPTLASKIDIDNINLLYEYGHKKYCLPFSQTNL 415 Query: 357 STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ 416 + E+ + + ++ + FAR L VEG +E ++ +A+ G F+ ++++ Sbjct: 416 TEENKKYLQRYLDVTKSQMFFARGILFVEGISEAILLPAMAKALGRPFEKYAVELVNVDS 475 Query: 417 SGLKPLVKFARRMGIEWH-----VLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPA 470 P V ++ V+ D D KK + + E T L Sbjct: 476 VAFTPFVNLLSSDKVKTCFSKVSVITDDDRCAKKNEKDYIDKNYDYDDVSSEVATNLQN 534 >UniRef50_C2BRV7 Putative uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRV7_9ACTO Length = 531 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 87/541 (16%), Positives = 170/541 (31%), Gaps = 54/541 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDL--YHFERD 58 M + + I + L + N +L+G N GKSSL+ L LLL Y Sbjct: 1 MKISSITIKNHSRLPDCVLDVRNNLILVGPNGSGKSSLIRCLDLLLGKSMQQLYYSISNS 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF E L I + P + E+ Sbjct: 61 DFRD-------AEQPLFIEAKLTNLNSDEL----------SFFPDEVDVQDNSLTIRLEA 103 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 +G +T+ F + + V + + R V + Sbjct: 104 NLNGEDLTISRFFPYGVGNAPLSSAQLKITGWNM---VPSDFSTKTLAPGRRNIVDDYLK 160 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYR-----L 232 + L + + ++D LS++ L + + Sbjct: 161 EIDASGDQVKLGEAIDALGSAINDSNAFTGALSSLASKLNPALEGGVTTENLRFVPGAAI 220 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 S+ + + R + + +I +F + ++ ++ I Sbjct: 221 EGNLLSDVRLEMKDKSGSMREVTEQSDGTKALISFAIFGLI-----------NSNGIIAI 269 Query: 293 EDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG 352 ++PET LHP +L Q I T+SG + S +++ + S A Sbjct: 270 DEPETHLHPSAQRNLMQVLQSSDRQLIIATHSGVVASEFSPDNIAAMR--ESMPPAQPKS 327 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVI 412 ED + ++ +R L AR + VEG+++ V+ +A G+H +GI+++ Sbjct: 328 GFLEGQEDQKMLARWWISSRIELLTARNIIAVEGQSDRMVVERVAELVGNHLKRDGIEIL 387 Query: 413 EFAQSGLKPLV-KFA--RRMGIEWHVLVDGDEAGKKYAA--------TVRSLLNNDREAE 461 E P V G + +L+D D K +A +S+ + + E Sbjct: 388 EAGSCNEMPYVMDIFGANGFGKQVSILIDEDAENKTASALSIALKDLASKSVFVSRVDLE 447 Query: 462 REHLTALPALDMEHFM-YRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 E++ A+ + + + F + +I + R + +A + Sbjct: 448 DEYVAAIGSSSLWEALGKSNLFPPNRLKCCRIARGASL-PSATELATFCRRKRNKIACAI 506 Query: 521 A 521 Sbjct: 507 V 507 >UniRef50_B9JNX5 Putative uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JNX5_AGRRK Length = 598 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 83/477 (17%), Positives = 162/477 (33%), Gaps = 51/477 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + RV I FRGI + + VL+G+N GKS++ +A+ L + + + Sbjct: 1 MRIVRVHIENFRGIKLADIYFDGTTVLLGDNNTGKSTVFEAIELAIGADRLARTQAIDEH 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY----------- 107 DF+ + I++ + ++R W Sbjct: 61 DFYGGDYRAGENQVPKIIVVEVVIADLDEQHCTKFRNNLEFWRTAARSLLGAGVAGGAAQ 120 Query: 108 ----HRIFYRLEGESAEDGSVMTLRSFLD----KDGHPIDVEDINDQARHLVRLMPVLRL 159 + R EG + T +++ +DG PI D + + + L Sbjct: 121 AGTEPAVRVRFEGAYDSENDEFTAKTWFAVPRQEDGTPISECRSGD--KREFGFLHLRAL 178 Query: 160 RDARFMRRIRNGTVPN--VPNVEVTARQLDFLARELSSHP-QNLSDGQIRQGLSAMVQLL 216 R + G++ + + EV R + L L D + + L+A+ + Sbjct: 179 RTGNRALSMERGSLLDVILKTYEVRTRMWEGLLGRLRGLDVVGAEDAEFGRILTAIRDAM 238 Query: 217 EHYFSEQGAGQARYRLMRRRASNEQRSWRYL-----DIINRMIDRPGGRSYRVILLGLFA 271 + A R+ + +R + G + ++L + Sbjct: 239 REIVPGEWADAPHLRVSELTREDLRRVLKSFLATGVPGYAAPFQHQGSGTINALVLAMLG 298 Query: 272 TLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLT 331 + Q ++ R + +E+PE L P + + L Q + T++S ++ Sbjct: 299 LIAQ-------RRNGRVIFAMEEPELSLPPHVQKRVVDKVRELAAQALFTSHSPYVIEQF 351 Query: 332 PVEHVCRLVRESSR--VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 E + L R+++ A + P L + R +L AR ++VEG+TE Sbjct: 352 TPEQMAVLTRDNAGLLTAMSVVLPDSL---KLKIFRDGFRTRFCEALLARRVVVVEGKTE 408 Query: 390 TWVINELARQC-------GHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVD 438 + +AR+ DA G + + + P F R +G + D Sbjct: 409 LVAYSAVARRAAELAPAQYKRLDALGWVPFDAGGQTAVAPFASFFRGLGKTVATIFD 465 >UniRef50_B3CCC7 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CCC7_9BACE Length = 588 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 104/583 (17%), Positives = 215/583 (36%), Gaps = 48/583 (8%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWF 62 ++++ I GFRG++ + L VL G N GK+++L AL L L S DD + Sbjct: 6 IDKIRISGFRGLDDFEMSLTPITVLTGTNNTGKTTILKALQLSLGSRSF---LSIDDLYI 62 Query: 63 PPGDINGREHHLHIILTFRESLPGRHRVRRYRP-----LEACWTPCTDGYHRIFYRLEGE 117 + I + F + + + + + + +R Sbjct: 63 S---KEKNATEIIIDIRFVPINDEGKILNDFSEEWEEVFTSDNIRFIEDFSCVPFRTIIS 119 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVR-------LMPVLRLRDARFMRRIRN 170 S + + D +P + E + R + RD +++ Sbjct: 120 YNSLKSSFDIEQKILVDWYPSEGEKWQNIIAKNSRIDFSKTPFFYIEAQRDVVDDMKLKT 179 Query: 171 GTVPNVPN---VEVTARQLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + + + + L+ L + +S+ + Q + I + ++ + + G G Sbjct: 180 SYLGKMLSDVAKAYNKKDLEELEKLISTLNQQAVEKSDILSTIQDSLEGINSAMDKSGTG 239 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMI--DRPGGRSYRVILLGLFATLLQ--AKGTLRL 282 ++ + + + D G + L F ++ A+ + Sbjct: 240 VTISPFTKKIRDLNKGVSIHYGDSDNSFTMDYHGMGTRSWSSLLTFKAFIKHNAELAQKE 299 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRE 342 ++ P++ IE+PE+ LHP + + +P Q+I +T+S + +E++ L + Sbjct: 300 NEPFFPIIAIEEPESHLHPNAQKKLYRQMYEMPGQKIISTHSPYVACSANIENLRGLYKN 359 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-G 401 + V+ L + + +D R++ + R LF++ +L EGETE + +A + G Sbjct: 360 LNNVSCGILNLNEMDDDDKRKLRQKVINTRGEILFSKAIVLFEGETEEQALPIMAEKYFG 419 Query: 402 HHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDG-DEAGKK---YAATVRSLLNN 456 GI I +G P ++FA+ I W++ DG D+ K +R L Sbjct: 420 CPASELGINFIGVGGAGSYFPFLQFAQSFNIPWYIFSDGEDDPVSKMTAAVKKIRKELFT 479 Query: 457 DREAEREHLTALPALDMEHFMYRQGFSDVFH-RMAQIPENVPMNLRKIISKAI------- 508 E E+ D E ++ R + + + QI + +N + SKA Sbjct: 480 TIENEKNIFIIDHKEDFEKYIIRLDYLNDIKSYLKQIELSKCVNEQHKESKAKGIDFFCT 539 Query: 509 -------HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVL 544 + +K A+ A + +P L+ +F ++ Sbjct: 540 NSYVLSESKKNKTKWALIYAHAIYN-SLKPIPLLVSNLFDKIK 581 >UniRef50_Q2N9H1 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N9H1_ERYLH Length = 654 Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 98/640 (15%), Positives = 171/640 (26%), Gaps = 122/640 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LE V I FR I+ L + ++ LIG N GKS +L A+ S S +DF Sbjct: 1 MRLETVYIKNFRAISELEINIDDVTTLIGSNGVGKSCVLKAIDKFFSKSSA---VTLEDF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGR--------------------------------H 88 + I L+F E Sbjct: 58 HDG-----NVSDPIEIGLSFTELQADELERYAARVHGGTLRIVRVFRSSSLGRENGRYFG 112 Query: 89 RVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQA- 147 R++ + T + Y E+ + + D + E+ N Sbjct: 113 FAYRHQAFDEVRNLPTANDQKSAYNALTETGDFPGLTKCTRIADALTAMSEWEENNSDNC 172 Query: 148 --------------------RHLVRLMPVLRLRDARFMRRIRNGTV------PNVPNVEV 181 + V + + +RDA V V + Sbjct: 173 VLAMDDGQFEGFANVARGGLQRFVSFVFIPAVRDASIDAVDSKKAVIGQLLELYVRTILQ 232 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 +++ E+ ++L + L + LL + + Sbjct: 233 AKKEIKEFQTEMDERYKDLVSPENIGELDELSGLLTSTLTNFYGESEVELNWKEVEPLPL 292 Query: 242 -----RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP-------- 288 + ++ G R + + L A D Sbjct: 293 PLPSAETLLTEQGYKGPVEGKGHGLQRAFIFTILQHLALALHDTEQDSGEEESEDGPTSH 352 Query: 289 --LLLIEDPETRLHPIMLSVAWHLLNLLP----------LQRIATTNSGELLSLTPVEHV 336 +L IE+PE HP +L L +Q I ++S L+ E + Sbjct: 353 SIILAIEEPELYQHPTKQRHFAEVLRNLSDLDAHKGAQSVQLILCSHSPHFLATDRFEEI 412 Query: 337 CRLVR----ESSRVAAWRL----------------GPSGLSTEDSRRISFHIRFNRPSSL 376 + R + + L+ E + + Sbjct: 413 RVIHRSLDEDEKSTSTVSQVSYQHVVDQLAGVSEDPEKHLNPEALKVRLHTLTPLVAEGF 472 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHV 435 FA +LVEG ++ + AR F+A GI +IE L + R +GI V Sbjct: 473 FASKVVLVEGTSDVAALRAAARMSDKSFEASGIALIEVGGKTNLDKPLIIFRSLGIPIFV 532 Query: 436 LVDGDEAGKKYAAT-------VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHR 488 L D D K ++ L+ E E + R +++ Sbjct: 533 LFDSDGHKTKDHEKKAHVNVQIQKLMGESNPEEVRTYVCPQFASFETELGRHLKAEIGAN 592 Query: 489 MAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRG 528 + + S+ + + P +V M G Sbjct: 593 LFDEAVGKAGYDYGLESRQVRKV--PAAMTQVLMTCNLAG 630 >UniRef50_A1SC11 SMC domain protein n=2 Tax=Actinomycetales RepID=A1SC11_NOCSJ Length = 533 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 89/559 (15%), Positives = 180/559 (32%), Gaps = 45/559 (8%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 +L+++ I +R L N+++G+N GKS+LL+A+ + L+ + + Sbjct: 1 MLKKIAIRNYRTFKSFELEFAPDLNIVVGDNDAGKSTLLEAIGIALTLRLGGRSLQSELS 60 Query: 61 WFPPGDINGRE-------------HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 F E + I L F +S +R L+ P Sbjct: 61 PFLFNLETTEEYIAALTAGATPDPPEILIEL-FLDSASAPAILRGSNNLDGTDDPGVRVR 119 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR- 166 + GE E + + + + + + A + V L DA +R Sbjct: 120 IALNPDYHGEYTEFVKDPSQVRLVPTEYYNVQWLGFSGNAITFRSIPAVASLIDATTIRL 179 Query: 167 -RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 + + + N +T + L R S + S + A+ + LE + G Sbjct: 180 ASGADYHLQGIINNHLTDGERVELTRAYRSLREEFSS---NPSIEAINKSLE---GQPGD 233 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 R + S L + L + L + Sbjct: 234 VSDRTLSLSIDVSQRSSWESNLVPHLDDLPFGFVGKGEQSSLKVLLALNRKVQDA----- 288 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVRES 343 ++L+E+PE L L+ ++ Q TT+S +L+ ++ + L + Sbjct: 289 --HIVLVEEPENHLSFTNLNQLVAKISEKCKDKQVFITTHSSYVLNKLGLDSLFLLTPRT 346 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELARQCGH 402 L + L ++ + A+ +LVEG ++ V+ + G+ Sbjct: 347 G------LRLTDLPASTLDYFKKLSGYDTLRLVLAKKVILVEGPSDELVVQRAYQDKHGN 400 Query: 403 HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAER 462 +G+ VI K + A+ +GIE HV+ D D A S Sbjct: 401 LPIHDGVDVINVRGLSFKRFLDIAKPLGIEVHVVTDNDGADPAVVEAGYSDYTAVPHIHV 460 Query: 463 EHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAM 522 +E + D + + ++L K ++ ++K A+++ Sbjct: 461 HVGQDPTRKTLEPQLVGANGRDTINAILGTRYTTDVDLLKHMTA---SANKTTCALKIFE 517 Query: 523 EAGRRGVDSVPTLLKKMFS 541 ++P + + Sbjct: 518 HLDTI---TMPGYIADAVA 533 >UniRef50_UPI0001746ACF ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746ACF Length = 665 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 103/667 (15%), Positives = 193/667 (28%), Gaps = 126/667 (18%) Query: 1 MILERVEIVGFRGINRLSLMLEQ---NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M LE +E+ FR + RLS+ L + +L+G N GK+S++DAL L SD Sbjct: 1 MRLETIEVRNFRLLRRLSIDLTKEKTTTILVGPNNSGKTSVMDALRLFAGVGSDALRITF 60 Query: 58 DDF----WFPPGDINGR-----------------EHHLHIILTFRESLPGRHRVRRYRPL 96 D I + + + LTF V R L Sbjct: 61 HDLSQLRHRNLRWIETKLSRSKDAEEKIAVLKRFSPRMRLDLTFTYDESPADLVAATRLL 120 Query: 97 EACWTPCTDGYHRIFYRLEGESA--------------------EDGSVMTLRSFLDK--D 134 RI Y L+ + R+F + Sbjct: 121 MDLNPSTNKVRLRIEYALDNAKKLLDDFDNRQRKAQTLCEFLRDSFREYFKRTFFKISLN 180 Query: 135 GHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQ-------LD 187 G +++ + + L+R+ V R R+ + + + Sbjct: 181 GQEVELLEESGLLNTLLRIDIVPAQRHVDDDDNSRSAKLSKLLHDHYERYYKVDNAAGYQ 240 Query: 188 FLARELSSH------PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 L ++ +L+ G++ + L + + R + Sbjct: 241 ALENAVTESASDLTVKYSLAFGRLTKRLKSFGYPSGQTAPDLRVRAELSTETIYRDNARI 300 Query: 242 RSWRY-------LDIINRMIDRPGGRSYRVILLGL-FATLLQAKGTLRLDKDARPLLLIE 293 + G +I + L + A L +K ++ +E Sbjct: 301 FYASEHAGKQGLKEKFELPEKYNGLGFKNLIYIVLQLESFRAAIDALTGEKPRVHIIAVE 360 Query: 294 DPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 +PE LHP M +V ++ + Q + +T+S +++ + E + R V Sbjct: 361 EPEAHLHPQMQTVFISEISKVLENDGGSTAQVLLSTHSSHMIAHSGFEPIRYFRRIGREV 420 Query: 347 AAWRLGPSGLSTED---SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH- 402 L L +D + +IR FA + VEG+ E ++ + + Sbjct: 421 VIRDLSKLPLDHDDSDLLGFLRRYIRLTHCDLFFADKAIFVEGQVERLLLPMMIEELAKE 480 Query: 403 ----HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK------------- 445 + ++ I + E +GI ++ D D Sbjct: 481 EGCENLASQYISISEVGGGHAHKFKPIIDFLGIPTLIITDLDSVDGNGEKCPVADGEGTS 540 Query: 446 ---------YAATVRSLLNN-DREAEREHLTALPALDMEHFMYRQGFSDVFHRM----AQ 491 TV L D E R + + E + + F + F Sbjct: 541 NACLREWIPAKKTVGELRACVDHEKTRGSIRVAYQVTQERY-CGRSFEEAFIYANIPWLT 599 Query: 492 IPENVPMNLRKIISKAIH------------RSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 + I KA+ + K D A+++ E G P +K+ Sbjct: 600 ANFGKLSTTKAAIKKALKNGLATQAWDLSGKLGKVDFALDLISEPGWST----PLYIKQG 655 Query: 540 FSRVLWL 546 + + Sbjct: 656 LTWLAQF 662 >UniRef50_A0K383 ATP-dependent endonuclease of the OLD family-like protein n=7 Tax=cellular organisms RepID=A0K383_BURCH Length = 689 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 84/534 (15%), Positives = 161/534 (30%), Gaps = 92/534 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNN-VLIGENAWGKSSLLDALTLLLSPESDLYHFER-- 57 M L V+I FR ++ + L LE V++G N GK+SL + + LL+ S + E Sbjct: 1 MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFS 60 Query: 58 ---------------DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP 102 +D ++ + LTF+ + Sbjct: 61 SACYEGFRLAWEARSNDEHDDIVRAL--IPYIELRLTFQYDPNQPQLGPLSPFVIDLDPD 118 Query: 103 CTDGYHRIFYRLEGESAED----------------GSVMTLRSFLDKDGHPIDVEDINDQ 146 CT+ + Y L+ TLR + + + + Sbjct: 119 CTEALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLRDRIPGNYATRIWAEDPND 178 Query: 147 ARHLVRLMP-----------VLRLRDARFMRRIRNGTVPNVPNV----------EVTARQ 185 A + +L+P + R + + + + + +Q Sbjct: 179 AGNQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQ 238 Query: 186 LDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHY----FSEQGAGQARYRLMRRRASNEQ 241 + + Q+ D L ++ L+ + Q +R+ SN Sbjct: 239 IADSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFT 298 Query: 242 RSWRY-LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 + + G + +I + L L+ IE+PE LH Sbjct: 299 KVRYAGYSGVALPESYNGLGARNLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLH 358 Query: 301 PIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCRLVRES--- 343 P M V L P+Q + +T+S + + E + + Sbjct: 359 PQMQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVANEAGFESIRYFLGRDVSG 418 Query: 344 -------SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 + + R G G+S D + + ++ R FA +LVEG +E ++ L Sbjct: 419 AQPGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVL 478 Query: 397 ------ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 A ++ + IE + K + + ++ D D K Sbjct: 479 VGKLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEK 532 >UniRef50_C6D7P9 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7P9_PAESJ Length = 695 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 85/619 (13%), Positives = 191/619 (30%), Gaps = 90/619 (14%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER-- 57 M +E+V+I FR ++ + L+ + V++G N GK+S + LLS + + E Sbjct: 1 MRIEKVKIKNFRLLHDAEITLDEKTTVIVGRNNSGKTSFTEVFRRLLSDTTAKFKLEDFS 60 Query: 58 ----DDFW---------FPPGDINGREHHLHIILTFR------------ESLPGRHRVRR 92 +DFW I ++ + L+ + E + Sbjct: 61 IPVHEDFWRAFLLMKEGQEDQQIREVLPYIQVTLSLKYDIETDNFGPMGEFVIDLDPDST 120 Query: 93 YRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQ------ 146 + + ++ +E D + + +F + + Sbjct: 121 HCVTLLRYQLSDGKISSLYGDIEYTGEPDKTEIEKMNFYRVIKERVPLLYSTSVYAIDPQ 180 Query: 147 ------------ARHLVRLMPVLRLRDARF----MRRIRNGTVPNVPNVEVTARQLDFLA 190 R L++ + R R I G V + ++ + Sbjct: 181 DSSNQKKLDLTLFRELLQTGFIQAQRGLDDTTYKDRDILGGIVERMLDIAKSDNSKSADN 240 Query: 191 RELSSHPQNLSDGQIR---QGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY- 246 +S + + Q++ + +LL G + L+ + +R Sbjct: 241 TTVSLLESAVKEIQLKIDSDFNQHVNKLLPALSLFGYPGLSTLPLLTETTLDVKRLLENH 300 Query: 247 -------LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 ++ +N G S +I + R L+ IE+PE L Sbjct: 301 TKVNYPGINGVNLPEAYNGLGSRNLIYILFHLFEFFKMYKARKTAANFHLIFIEEPEAHL 360 Query: 300 HPIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 HP M V L + P+Q + TT+S + + + + + + Sbjct: 361 HPQMQEVFIRKLTEIADEFSRQFNSGQPWPVQFVITTHSTHIANEASFDSIRYFLNKEMN 420 Query: 346 VAAWRLG---PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 L + D + ++ + FA +L+EG TE ++ ++ + + Sbjct: 421 THVKDLNLGFNNDSQNGDKEFLHKYLTLTKCDLFFADKAILIEGPTERILMPKMIEKVEN 480 Query: 403 H------FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 ++ + +IE + + + I ++ D D + + L + Sbjct: 481 ESSHVRQLSSKYLSIIEVGGAYAHHFIYMLNFLEIRTLIITDIDSVESTNQSRRKKCLVS 540 Query: 457 DREAERE--HLTALPALDMEHF-MYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSK 513 D+ + + ++ + +I VP + + + I++ K Sbjct: 541 QGTFTSNACIKYWFNNNDISPIALLSKNETEKTKGLVRIAYQVPDEIEHGMIE-INKMLK 599 Query: 514 PDLAIEVAMEAGRRGVDSV 532 A ++G D + Sbjct: 600 ETAAS--VESIAKKGKDKM 616 >UniRef50_Q2IEH8 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEH8_ANADE Length = 615 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 96/510 (18%), Positives = 173/510 (33%), Gaps = 81/510 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L +++ FR ++ ++ VL GEN GK+++L+AL LL P Sbjct: 1 MYLSSLQLTRFRSFRDGTVYFDETLTVLAGENNSGKTNVLEALRLLTPPSDGRVVR---- 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 W P DI I T+ + + T + + + G+ Sbjct: 57 -WPEPRDITRGFESFSIRGTYSALDDRQ--RGSFLTCLRGPTSDSASLGLQYAEVPGKRR 113 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTVPNVPN 178 + S + P+D +I +AR LVR + + LRDA R + G + ++ Sbjct: 114 GERSRVV---------GPLDAPEIEPKARELVRHVHLPALRDASRELASSAPGRIEHLLR 164 Query: 179 VEVTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQARY----RLM 233 T Q + L + + L +D I + + + + + +A + Sbjct: 165 RTATDEQREALVAKARQALELLKADPVIGAAEAQVQEGVRALTAGVHPHEAHLGFADPTL 224 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 A + + + + G V+ L L L L L L+E Sbjct: 225 TDLARDLRLRLGLAGMPAADLYESGLGYANVLFLALVVVELANTADADL-----TLFLVE 279 Query: 294 DPETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVEHVC 337 +PE LHP + +V L +Q I +T+S L S + V Sbjct: 280 EPEAHLHPQLQAVMLEYLRDKAEESQRRARSPGEYAGRIQVIVSTHSPHLTSAVGSKKVV 339 Query: 338 RLVRESSRVAAWRLGPSG------------------------LSTEDSRRISFHIRFNRP 373 L ++ + + P+G L ++ +I ++ R Sbjct: 340 ILRTQAGPDVSPEVAPAGAAGRGGEAASASSFSAAVSLAQIRLREDEREKIDRYLDVTRS 399 Query: 374 SSLFARCWLLVEGETETWVINELARQC--GHHFDAEGI---KVIEFAQSGLKPLVKFA-- 426 + LF+R LLVEG +E +I + G + + ++ + +P V+ Sbjct: 400 AMLFSRRVLLVEGISEALLIPAFGKVLYRGKSTELARLTASTIVPISGVDFEPYVRLLLT 459 Query: 427 --RRMGIE----WHVLVDGDEAGKKYAATV 450 G VL D D A + + Sbjct: 460 PDPGSGKRVADLVVVLTDEDPASETAKQEI 489 >UniRef50_C7Q3I3 ATP-dependent OLD family endonuclease n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q3I3_CATAD Length = 669 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 74/570 (12%), Positives = 156/570 (27%), Gaps = 89/570 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++I FR + + + +++ +++G N GK+SL++ + F +D Sbjct: 1 MRLTSIKIKNFRLLEDIEVGIDEIATLIVGRNNSGKTSLVNVFDKFFG--DEDCTFVLED 58 Query: 60 F-------------------WFPPGDINGRE-------------HHLHIILTFRESL--- 84 F P D E L + +T+ E Sbjct: 59 FPAARIADIKQAHEWWAKAEHEEPADGIDPESDLHAAAVGLLPQMTLQLTVTYDEKENLA 118 Query: 85 ---------PGRHRVRRYRPLEACWTPCTD--------GYHRIFYRLEGESAEDGSVMTL 127 R + P + +F + Sbjct: 119 ALSGMILDLDEECRDVVIEAVLEADQPENFLAEYHTAASHQELFVEHRWLRSNFLKFFKT 178 Query: 128 RSF-LDKDGHPIDVEDINDQ-ARHLVRLMPVLRLRDARFMRRIR----NGTVPNVPNVEV 181 + + G+P I +++ + + R + + + Sbjct: 179 SFYAVSVRGNPPARRPIKKSVIDNVLSVQFIYAQNKLDDSGTDRTRNLSKSFEDFHRAHS 238 Query: 182 TA----RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR-- 235 +D + L + Q + + + L + +++ + Sbjct: 239 EDAERNHNIDGIDAALLTASQRVDKS-FAALFTPIFDDLNRFGVGNIEPVRVPKVVTKFD 297 Query: 236 -----RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 R S + G ++I + + + A LL Sbjct: 298 ATSVFRGSTRIEYPAETGDMALPEGHHGLGYSKLIFTIVRIVDFYETHRRAVPRPAIQLL 357 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRES 343 IE+PE LHP M + +Q I TT+S ++ + E V R Sbjct: 358 FIEEPEAHLHPQMQEAFIANIRDFLRTKDGWNVQVIVTTHSPHIMMKSGFECVRYFDRWD 417 Query: 344 SRVAAWRL-------GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 L G + + R + ++ FA +LVEG E ++ E+ Sbjct: 418 PGARVRDLQTFQQLAGATTDGQDALRFLQQYMELRPCDMFFADKIILVEGTVERLLLPEM 477 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 ++C + + VIE + + + ++ V+ D D + Sbjct: 478 IKRCAPTLAHKYLSVIEVGGAYALKFRELLSFLSVQTLVITDLDSGTLEGHHKACEPSTA 537 Query: 457 DREAEREHLTAL--PALDMEHFMYRQGFSD 484 L + D+ + + Sbjct: 538 GAVTTNATLKSWLPAERDIATLLEIDDAAK 567 >UniRef50_Q64X74 Putative uncharacterized protein n=1 Tax=Bacteroides fragilis RepID=Q64X74_BACFR Length = 529 Score = 198 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 77/551 (13%), Positives = 178/551 (32%), Gaps = 30/551 (5%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++ERV I F+GI + + ++ N+++G N GKS+L++A+ L L + + F Sbjct: 1 MIERVIIENFKGIKKADISFNDKINIIVGNNGIGKSTLIEAMALALGYGINQLEITQYLF 60 Query: 61 WFPPG---DINGREHHLHIILTFRESLPGRHRVRRYR-PLEACWTPCTDGYHRIFYRLEG 116 D + + I L F ++L + + L + L Sbjct: 61 HASTWKEFDDSKVLPEIIIELYFNKALSAEYSGKNNSLTLLTSGIRLRIACDNAYLSLFQ 120 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV 176 E E + ++ + + LV P + + N + Sbjct: 121 EQKEQYRHIPCEFYIIDRH----WFSGDTVKQLLVPFNPWIIDSSSSTFNNKANQLATRL 176 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + +++ + + L + ++ + ++ + L + + + Sbjct: 177 ISHKLSDTERVQVKGCLRALREHF---EGDNKVNEINTSLNDKIKDVSPDFKLTVDLTTK 233 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 + L I G + LL L + + LL++E+PE Sbjct: 234 TAWNTILCPVLKEIPFSQIGLGDQCIVNTLLSL--------DSSNKIERKEKLLIVEEPE 285 Query: 297 TRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGL 356 + L + + L Q TT+S + + + ++ L E ++ ++ Sbjct: 286 SHLSHTKMYELLNCLGNFEGQMFITTHSSYVANKLSLSNLLVLGNEEGKIRNQKITDLA- 344 Query: 357 STEDSRRISFHIRFNRPSSLFARCWLLVEGETETW-VINELARQCGHHFDAEGIKVIEFA 415 D + + + +LVEG T+ ++ ++ H A I++I Sbjct: 345 ---DYNFFARVPNYPTLRIALCKKAILVEGPTDEMVLLYHFMKEYQCHPFAMDIELISIG 401 Query: 416 QSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL-LNNDREAEREHLTALPALDME 474 K + + + ++ D D R + N+ + E+ ++L +E Sbjct: 402 GVVFKHFAQLGATLNKQIAIITDNDSLSFDDLIKKRGVDQGNNIKLFSENDSSLH--TLE 459 Query: 475 HFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPT 534 ++ I V + + + K + A ++ VP Sbjct: 460 PAFVHANAGNIQKLSLLIRGKVQVGETEKQLSDYMKKHKTEWAQKLLEA--DAYDYDVPQ 517 Query: 535 LLKKMFSRVLW 545 +K + + Sbjct: 518 YVKDAVNWLTN 528 >UniRef50_C0WFY9 ATP-dependent OLD family endonuclease n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WFY9_9CORY Length = 607 Score = 198 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 106/616 (17%), Positives = 191/616 (31%), Gaps = 91/616 (14%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M LE I GFR + + +L+GEN GKS+++DAL L +P S Sbjct: 11 MWLESARIKGFRSCEKTEVEFCPDLTLLVGENNAGKSNIIDALRLATAPLSGRRTR---- 66 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F+ G + I L + E + + + A +H + Y + Sbjct: 67 FFEIDDPSFGAGVNPDIELVYTEGDEFQ----QALFIGALDLQSKKIHHHVRYFSPTDRY 122 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG-----TVP 174 G L + D + R + + + LRDA+ NG + Sbjct: 123 PRGRTERL-------AGLVASPDPESEVRSKINHVYLEPLRDAKRELDSANGRRLGSVLR 175 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA-MVQLLEHYFSEQGAGQARYRLM 233 + + + L + + + + + + L + +Q A + Sbjct: 176 YLLDEKEREEFLQSAHTATEQLSGSGAIQGVSKKIQEHLSSLTDAVRGQQVALGFEKPSL 235 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 A + I + G ++ + LQ ++ LLL+E Sbjct: 236 DHLARGLRLKMAEKGIDVTNLASSGLGYANLLFMSTILLELQ-----EANQSELTLLLVE 290 Query: 294 DPETRLHPIMLSVAWHLLNLLP---------------LQRIATTNSGELLSLTPVEH--V 336 +PE LHP + V L +Q I TT+S L S +E V Sbjct: 291 EPEAHLHPQLQGVLLDFLLEQAEESVKSAKEGRPAGRIQVITTTHSPNLASSVGIERTVV 350 Query: 337 CRLVRESSRVAAWRLGPSGL---STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 R + + ++ L + + D R+I ++ R LF + +LVEG +E ++ Sbjct: 351 IRSAKRDNLRSSVALALKQIEFANDNDRRKIDQYLDVTRSDLLFTQRVILVEGISEAVLL 410 Query: 394 NELARQCGHH---------FDAEGIK-VIEFAQSGLKPLVKFA-----RRMGI--EWHVL 436 LAR C ++ +P + M I + VL Sbjct: 411 PALARHCVFDRSDPEQLKRLRRFNATPIVNLGSVDFRPYLTLLLYDFGEGMHIADKVVVL 470 Query: 437 VDGDEAGKKYAATVRSL------LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMA 490 D D + A + + +AE +E + + Sbjct: 471 TDEDPTLEGSEAKSFNRAEELESIATKLKAEDILTVKTTEYTLEATLLTGASENAQLLRK 530 Query: 491 -------------QIPENVPMNLRKIISKAIHRS-------SKPDLAIEVAMEAGRRG-V 529 ++ R++ + + SK A ++A+ G V Sbjct: 531 AFLQQHPKSHCKWDAIQDAQEPGREMYRRLQSKKGADGLDISKGQFAHDIALAIAEPGVV 590 Query: 530 DSVPTLLKKMFSRVLW 545 PT LK+ Sbjct: 591 FKCPTQLKETIEAAAE 606 >UniRef50_A9C2Y9 ATP-dependent endonuclease family protein n=3 Tax=Bacteria RepID=A9C2Y9_DELAS Length = 600 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 99/583 (16%), Positives = 183/583 (31%), Gaps = 63/583 (10%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + +V++ FRGI + L ++V +G+N GKS+LL+A+ L+L PE + Sbjct: 1 MQIAKVKVEKFRGIESGIVTLSGHSVFLGDNNVGKSTLLEAIDLVLGPERLSRRPVIDEH 60 Query: 59 DFWFPPGDINGREH---HLHIILTFRESLPGRHRVRRYRPLEACW-----------TPCT 104 DF + + +I++ + RH A T + Sbjct: 61 DFHAGRYLDEEGDPVLIRIEVIVSDLSAEQQRHFRDHIEWWSATEKTLLVGPPPEGTDAS 120 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDAR 163 D + EG ++ T +F + + + LR Sbjct: 121 DVSAALRVFFEGRYDKEEDDFTGNTFFATPVLAEGTHPTFKTTDKRKCGFLYLRTLRTGA 180 Query: 164 FMRRIRNGTVPNV------PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLE 217 + G++ +V V + L+ L + + L + + + V+ Sbjct: 181 RALSLERGSLLDVILRLQDKRVTMWEDLLNELRKLPVADKPELGIAPLLKDVQDAVRRFV 240 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + R + R A + + R Y G TL+ A Sbjct: 241 PSDWAEEP-HMRVSDLTREALRKDLTVFMGTGAKRPDGSTYCAPYHHQGTGTINTLVLAL 299 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVC 337 ++ + +E+PE L P + + Q + T++S +L + Sbjct: 300 LSIIAGLKQNVIFAMEEPEIALPPHTQKRIVNSVRETSAQALFTSHSPYVLEEFAPSEMH 359 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 L R+ +++A + + R +L AR L+VEG TE I A Sbjct: 360 VLRRDGGKLSAMLATYPPAVKPKAYKAE--FRARFCEALLARYVLVVEGRTEFDAIPAAA 417 Query: 398 RQCG-------HHFDAEGIKVIEFA-QSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAAT 449 R+ +A G+ VI+ + + PL KF R +G + D Sbjct: 418 RRLNDLNPTEYKTLEALGVAVIDAQTDAQVAPLGKFFRDLGKTVFAVFD----------K 467 Query: 450 VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIH 509 + +A H E+ + R A +I+K Sbjct: 468 QEPAASAAIKAAVHHSFESAEKGFENVVLHHTAEAALRRYALSLVAENAWPNHLIAKT-- 525 Query: 510 RSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD 552 P+ A V ++ + A+G D Sbjct: 526 ----PNAAQTVEQ-------------IRDALRQFFGWAKGSGD 551 >UniRef50_Q1LEC3 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Burkholderiaceae RepID=Q1LEC3_RALME Length = 626 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 105/635 (16%), Positives = 189/635 (29%), Gaps = 104/635 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ V I FR + +++ + IG N GKS++L AL + + E F Sbjct: 1 MKIQTVRIRNFRTLKDVTIPFDSVTTFIGPNGAGKSTVLRALDWFFNGKPGSLTEEDCSF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRR----YRPLEACWTPCTDGYHRIFYRLEG 116 + + I + A DG + +G Sbjct: 61 -----GATDEDIEVQITFADLTEKDREALGKYAPEGVGTFTAWKRRSPDGADVLSANAKG 115 Query: 117 ESAEDGSV--------MTLRSFLDKDGHPIDVE--------------------------- 141 +G L + L +D +D+ Sbjct: 116 FPDFNGIKAAGGATAKRELYASLRRDRPELDLPAANTGPAVEQSMTTWEAAHTDQLLDAP 175 Query: 142 ----------DINDQARHLVRLMPVLR-LRDARFMRRIRNGTVPNVPNVEVTARQLDFLA 190 + + L + V LR + + + + + D Sbjct: 176 EALQTNFFGFNSGGKMSGLFDFVLVTADLRASEESIDGKASIIGRILERSIDRTAADEAI 235 Query: 191 RELSSH----PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 E+ + Q + + + ++ L A+ L + G+A R+ Sbjct: 236 AEIVAESRAKQQQVYEEKFKEQLGAITTQLNEVVTTYAPGRAITVSPAEVELKAPRTTFD 295 Query: 247 LDIINRM----IDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPI 302 + +++ ++R G R +L+ L Q+ + L IE+PE HPI Sbjct: 296 VAVLDGTTETAVERQGHGFQRTLLISALQLLAQSG---AASAEGIICLAIEEPELFQHPI 352 Query: 303 MLSVAWHLLNLLP------LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGL 356 +L L +Q T+S L + RL R + V + + + Sbjct: 353 QAQAFAKVLRSLAEDASKRIQVTYATHSPYFLEARHFHQIRRLTRSADEVPVVTVHCATV 412 Query: 357 S--------TEDSRRISFHIRFNRPS----SLFARCWLLVEGETETWVINELARQCGHH- 403 T D + + N +LFA LVEG TE+ V + + Sbjct: 413 EIVKAKLNGTVDGDVVDRRLDHNVADQLAIALFANRAFLVEGTTESAVFYGIGDRTSPGA 472 Query: 404 FDAEGIKVIEFAQSGLKPLV-KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAER 462 +A GI ++ PL +G+ + L D D G + A ++ + + ER Sbjct: 473 LEAAGISIVPVGSKTSIPLAHAILESIGVPVYALFDADG-GFETRAKAKNKKQEEIDRER 531 Query: 463 EHLTALPALDM------EHFMYRQGFSDV-------FHRMAQIPENVPMNL-RKIISKAI 508 + M E SDV + + + A Sbjct: 532 NNHALENRRLMRYFGLPEEDFPPTTISDVAAILDDHLESFLSANWSEWITTCNSVEQDAG 591 Query: 509 HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 SK LA A R VP +L ++ +V Sbjct: 592 INLSKNQLAYRTA---TLRSGGVVPVMLTQILVKV 623 >UniRef50_Q5NYH6 Putative uncharacterized protein n=3 Tax=Betaproteobacteria RepID=Q5NYH6_AZOSE Length = 608 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 82/508 (16%), Positives = 160/508 (31%), Gaps = 44/508 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + R+ I FRGI L + +LIG N GKS++ +AL L+L P+ ++F Sbjct: 1 MRVSRLSIENFRGIANAVLHFSGHTLLIGGNNVGKSTICEALDLVLGPDRLNRTPPVEEF 60 Query: 61 WFP----PGDINGREHHLHIILTFRESLPGR----------HRVRRYRPLEACWTPCTDG 106 F D L I + R L D Sbjct: 61 DFRNANYLADDGETIVPLRIEAILVDLTDDIKTLCAANLEFWHTSEKRLLTEGEIAAADD 120 Query: 107 YH-RIFYRL----EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD 161 + RL + ED V + + + I + + + + + +R Sbjct: 121 PQVELCLRLVTVGRYDIDEDQFVARTIYGRTNEEPDEEPKSIPTRVKRAIGFLYLRTIRT 180 Query: 162 ARFMRRIRNG-TVPNVPNVEVTARQLDFLAR---ELSSHPQNLSDGQIRQGLSAMVQLLE 217 + G + N+ ++ + + R + + P + ++ L + L Sbjct: 181 GSRALSLERGTLLDNILRMKEARKGMWESIRKRLAVLNPPIDADATELGPVLDEIEARLA 240 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYL------DIINRMIDRPGGRSYRVILLGLFA 271 Y + G G++ + + R + G + ++L L Sbjct: 241 EYIAPSGEGRSTRLFVSQLTREHLRKTIAFFLTMGQGEAAVPFQQSGTGTLNTLVLALLT 300 Query: 272 TLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLT 331 + K + +E+PE L P + L Q T++S ++ Sbjct: 301 FIADLKKD-------NVIFAMEEPEIALPPHTQRRIANYLLEETSQCFVTSHSPYVIERF 353 Query: 332 PVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETW 391 E + +L R + + + + R ++ R ++ EG TE Sbjct: 354 EPEGIVKLDRNDQGELSGVVIKLPAGMKAKNY-RQNFRRAIAEAMLGRGVIVGEGITEQD 412 Query: 392 VINELARQCG------HHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGK 444 + +A + D GI VI L+ L F + +GI D + Sbjct: 413 ALLLVAHKLEEHNLDLFPLDVAGISVINADGDGNLEKLGAFFKEIGIPAFAFFDRKKRTD 472 Query: 445 KYAATVRSLLNNDREAEREHLTALPALD 472 + ++ +E ++ L A + Sbjct: 473 QEIIALQGTYAITKEITQKGAEMLMAEE 500 >UniRef50_C6WN28 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WN28_ACTMD Length = 648 Score = 195 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 90/593 (15%), Positives = 176/593 (29%), Gaps = 82/593 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES---------- 50 M + +V I FR + + + +Q LIG N GKS++L AL + Sbjct: 1 MRISKVRIKNFRCLADVEVRFDQVTTLIGPNGVGKSTVLRALDWFFNGTKPGALLDEDRT 60 Query: 51 -----------DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEAC 99 + D G + +I R + R + Sbjct: 61 GGAEGDVVVEVEFDQLTDAD-REELGKHVPAQSERCVIWKIRRADGTELMSANARAFQGF 119 Query: 100 -WTPCTDGYHRIFYRLEGESAEDGSV----------MTLRSFLDKDGHPIDVEDINDQAR 148 W G + R + + + + + +P ++D Sbjct: 120 AWIREVAGAAEMRVRYQQVRTDLPDLGLPAVRSKPEVEAALKAWELANPDRLDDAEVAVT 179 Query: 149 HLVRLM----------PVLRLRDARFMRRIRNG-------TVPNVPNVEVTARQLDFLAR 191 +L V D R ++G + + + LA Sbjct: 180 NLFGFNGQAKMSGLFDYVFVSADMRVEEEAKDGRSALVGRILERTVDRTAADADIKALAA 239 Query: 192 ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN 251 ++ S + + LS + L + G+A ++ R+ L + + Sbjct: 240 DVESRQDGIFAKNFAKQLSTLSASLSEAVGQYTVGRAVKVQATKQKIEPPRTQFSLSVTD 299 Query: 252 RMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL--IEDPETRLHPIMLSVAWH 309 +D P + L LQ + + IE+PE HP+ Sbjct: 300 SSVDTPVEKQGHGFQRTLLIAALQLLAKHGNAERGSGAICLAIEEPELFQHPVQARTFAS 359 Query: 310 LLNLL------PLQRIATTNSGELLSLTPVEHVCRLVRE--------------SSRVAAW 349 +L L +Q T+S + + E V R+ R+ S+ V + Sbjct: 360 VLRTLAEDDAQNIQVAYATHSPHFIDPSRFEQVRRVTRDPKPEKGCAPTVTVRSASVESV 419 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH-HFDAEG 408 G R+ +LF+ +L EG ++ VI LA + G Sbjct: 420 EKRLVGYFDNVRNRLPAIAETALAEALFSSGAILAEGSSDKAVITGLAEKSSKTSLLNCG 479 Query: 409 IKVIEFAQSGLKPLV--KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 + V++ + +G+ +V+ DGD G + + + + + + E Sbjct: 480 VTVVDMNGKSNL-FIGHAVLAELGVPCYVVFDGD-LGLEGRKRLNAQPDKE---DPETWA 534 Query: 467 ALPALDMEHFMYRQGFS--DVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLA 517 D+ + + ++ + P + P A + +P LA Sbjct: 535 KKFEADLAAALAKNTKDNRNLLQYLGTTPSDYPETCAHASYAAFVDTIEPLLA 587 >UniRef50_A8RV16 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RV16_9CLOT Length = 685 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 95/571 (16%), Positives = 184/571 (32%), Gaps = 79/571 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQ---------NNVLIGENAWGKSSLLDALTLLLSPES- 50 M L V I FR +L NVLIGEN GK++++DA+ +L S Sbjct: 1 MYLSCVRIWNFRKYGYANLDATPALEVYLKGGLNVLIGENDTGKTAIIDAIKFVLGTRSH 60 Query: 51 DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRI 110 D + DF+ R L I F+E W + Sbjct: 61 DTLQIKECDFYEDL--KGERSELLKIECVFQELSDDEAGN------FLEWLTFDGDKAEL 112 Query: 111 FYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI-- 168 R+ ++ ++ + D A L+R+ + LRDA + Sbjct: 113 SVRMIARRRDN-------RIMNSITAGMPELDTRFDAIELLRVTYLKPLRDAENELKHGY 165 Query: 169 --RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA--------------- 211 R + + + L L R Q + + ++ L Sbjct: 166 HSRLAQILLNHPLFTKEKDLHVLERYFGIANQKIEEYFKKEKLEKDEIFGIEDGEKGAKE 225 Query: 212 ----MVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL 267 + L + ++ + R L +I ++ G S + + Sbjct: 226 ITGKLEATLREFMGNNYDSHGYEPIISASRNELTSILRRLSLIIA-QNQVGLGSLNQLFI 284 Query: 268 GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--------QRI 319 L L ++ + LIE+ E LHP L Q I Sbjct: 285 ALELLLFDI-------ENRFNIALIEEIEAHLHPQAQLRLIAYLQNKNDNDNSNKKLQCI 337 Query: 320 ATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFAR 379 TT+S L S + ++ ++++ + L + D + + + + + FA+ Sbjct: 338 ITTHSITLASKIKISNLIYC--KNNKAYMLDSAHTALESGDYKYLERFLDSTKANLFFAK 395 Query: 380 CWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG-----IEWH 434 + VEG+ E ++ +A+ G + G+ ++ +R I Sbjct: 396 GVIFVEGDAENILMPVIAKIIGMPLEKYGVSIVNVGSLAFLRYANIFKRKNGECIDIPIA 455 Query: 435 VLVDGDEAGKKYAATVRS-----LLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 ++ D D Y + + + + E + L D+E Y + D++ ++ Sbjct: 456 IVTDLDVRPDYYYEIKKEENKNIVYSIEDLKGAEEICELKCSDIEGKYYIKK-EDIYEKI 514 Query: 490 AQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 +N L K + +I K +++ E+ Sbjct: 515 K--EQNKVKKLSKKVKDSIEIYIKKEVSTEL 543 >UniRef50_C1EJU5 RecF/RecN/SMC N domain protein n=2 Tax=Bacilli RepID=C1EJU5_BACC3 Length = 688 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 85/563 (15%), Positives = 157/563 (27%), Gaps = 67/563 (11%) Query: 1 MILERVEIVGFRGINR-LSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + R+ + FR ++ E NV++G N GK++++ AL LL D Sbjct: 1 MYISRLTLKNFRTFKNETTVQFHEGTNVIVGHNNAGKTTIIKALELLFDANKSKR-LSID 59 Query: 59 DFWFPPGDINGRE--HHLHIILTFRESLPGR----HRVRRYRPLEACWTPCTDGYHRIFY 112 DF +E + I T ES V L P F+ Sbjct: 60 DFNKNTTCDQLKESAPKITISATLVESEKEEIYSDDLVTVSTWLTKLEKPYEAKLTYEFF 119 Query: 113 --------------RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQAR------HLVR 152 ++EG + D ++L K H I V +I ++ + Sbjct: 120 LPEKELEDYYNDIRKIEGTNINDYWNEIKNNYLRKYVHKIYVGNIENKNLIDTDSINKFA 179 Query: 153 LMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQL-------DFLARELSSHPQNLSDGQI 205 + +RD + T+ ++ D + + L Sbjct: 180 FQFLTAIRDVERDLFTGSNTLLKEVIDFFIDYEIKTDISITDEEKKIKIREKKELFSKGA 239 Query: 206 RQGLSAMVQLLEH--------------YFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN 251 + + ++ + F + L S + I Sbjct: 240 QSLIQSLQDRMREGKKHMLQYVENTGAAFDKMQPSFEGGILDTELYSALKLIVENETGIK 299 Query: 252 RMIDRPGGRSYRVILLGLFATLLQAKGTLRL---DKDARPLLLIEDPETRLHPIMLSVAW 308 G +I + L +Q + + +L IE+PE LHP M Sbjct: 300 LPAVNNGLGYNNLIYISLLLAKMQKDASGEYLGTNAKVYSILAIEEPEAHLHPNMQYKFL 359 Query: 309 HLLNLLP----LQRIATTNSGELLSLTPVEHVCRLVRESSRVAA----WRLGPSGLSTED 360 L Q T++S + + ++ + L + S + Sbjct: 360 KFLKQNRETEVRQIFITSHSPSITAAVDLDDIIVLYKNKEETKVAYPGKVFNESPDDIKS 419 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK 420 + + I + FAR + VEG E VI E A G+ VI + Sbjct: 420 KKYVKRFIDVTKADIFFARNLIFVEGLAEQLVIPEFATALGYDLTDTHTSVINIGGRYFE 479 Query: 421 PLVKFA------RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDME 474 +K + + D D K+ + A + Sbjct: 480 HFLKLFDTSKNPNAIEKRIACITDLDPVRKEKGRKGAKWVTCSVLALNNDIEKYDYNSCS 539 Query: 475 HFMYRQGFSDVFHRMAQIPENVP 497 + + S+ + + + Sbjct: 540 NLFVNKSKSNSSNHIKTFTQKEN 562 >UniRef50_Q83GY6 Putative uncharacterized protein n=2 Tax=Tropheryma whipplei RepID=Q83GY6_TROWT Length = 545 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 92/547 (16%), Positives = 189/547 (34%), Gaps = 63/547 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L++V I + I+ ++L + ++ VL+G N GK+S+L L LLLS + + + F Sbjct: 23 MQLKQVTITNYTPISDITLEVRRHLVLVGANDSGKTSILTCLDLLLSATTPMLY---SHF 79 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + + + + ++ + + I L E Sbjct: 80 QAWHFRDATKPIIISVDINNLDDK-----------IQIAFGINNNRISEIKLTLSAFLDE 128 Query: 121 DGSVMTLRSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN---- 175 + R L + P+ + L V A + + +G + + Sbjct: 129 SQMLTIKREVLYNNTTKPVADSQLTGIGWELFDAGEVPCT--ASQYKTVLSGVMESTNLR 186 Query: 176 ---VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 + ++ + R+ + L + + L++ I+ + + H + G Sbjct: 187 QHGLSSLTQSFREQIEASPFLENLRERLAEKLIKTMPGNLNKDAVHLVPKDDIGTQVLGN 246 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 +R + + +S +D ++ + + ++ L + ++ I Sbjct: 247 IRVQVKRQNKSPHMIDCLD--------GMRSLYAVAIYDVLSR----------DASVVGI 288 Query: 293 EDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLG 352 ++PET LHP + +L Q+I T+S +++ EHV + V Sbjct: 289 DEPETHLHPTIQRSLARVLQEESNQKIIATHSADIVGAFSPEHVAVVQPNGQVVQ----P 344 Query: 353 PSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVI 412 G ED R I+ R L AR + VEG ++ ++ A G + D GI +I Sbjct: 345 ARGFLGEDERIIARWWVHGRLEPLTARRIVAVEGISDRIILESAAEVTGRNLDRLGIALI 404 Query: 413 EFAQSG-LKPLVKFA--RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALP 469 E SG + P+ K + I +L+D D L + ++ + Sbjct: 405 EANGSGDMWPIYKLFGPKGFRIPISLLIDSDAV-----QHTSVRLGIPKNEFTQNSIYVS 459 Query: 470 ALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGV 529 D+E R ++ + + + K + VA + Sbjct: 460 KRDLEDEYTRAIGANTLWNALR-------ESKLFAHSELRGGGKTE--QAVAAFCRKNSS 510 Query: 530 DSVPTLL 536 + V L Sbjct: 511 NKVRAAL 517 >UniRef50_C0XXA7 ATP-dependent endonuclease, OLD family n=2 Tax=Burkholderia RepID=C0XXA7_BURPS Length = 616 Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 97/638 (15%), Positives = 178/638 (27%), Gaps = 135/638 (21%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L R E+ F+ + SL E VLIGEN GKS++L A+ LS + + F Sbjct: 1 MRLCRFEVRNFKCVEYASLEWEDLLVLIGENNAGKSTILSAIAAFLSGSAIK---DPSLF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGR--------------HRVRRYRPLEACWTPCTDG 106 D+ + +I F +++ EA + G Sbjct: 58 RRHLTDVANA---IELIGHFDGLSDEETTQVAVRGRMNGDRWVLKKRYWFEAGEDGESGG 114 Query: 107 YHRIFYRLEGESAEDGSVMT--LRSFLDKDGHPIDVEDIN-------------------- 144 + Y G +G + ++ P+ N Sbjct: 115 WKEALYSFSGAERFEGWPEADATWNAFPEEYQPLIAALPNRGVRPTNAARETLREAVRRQ 174 Query: 145 --------------------DQARHLVRLMPVLRL-------------RDARFMRRIRNG 171 + + ++P L +DA ++ N Sbjct: 175 RPDLVAFGAPNWVPNPGGGGNWKSNANSILPRPILVRAVQEASDETNAKDASTYGKLVNL 234 Query: 172 TVPNVPNVEVTARQLDFLAREL------SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 V +L E+ ++R + + L Q Sbjct: 235 IVERSLAQRPEMVRLQEALDEVLALFRPDEANPQRQAQEVRDLQDRINRSLNEVVGGQAL 294 Query: 226 GQARYRLMRR--RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT---- 279 + +R S I+ + G R +++ L +L A+ Sbjct: 295 IRTEAPEIRSMVLPSTSLVIRDVEAGIDTDVGHQGHGLQRTLVITLLQSLADAQAQVVPG 354 Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLSLT-PVE 334 L +LLIE+PE LHP M + + L Q T+S L + Sbjct: 355 AALAPVRANILLIEEPELYLHPQMERLMRDVLYRLAEQASTQVACCTHSPVFLDIATKYR 414 Query: 335 HVCRLVRESSR-VAAWRLGPSGLSTEDSRRISFHI------RFNRPSSLFARCWLLVEGE 387 + R+ + AA ++ + + + FA+ +L+E Sbjct: 415 AIIRMFKTPQGDAAAHQVTQDLFPGQPLQADRQRLNTVARFDPTVNELFFAKRVVLMEEF 474 Query: 388 TETWVINELARQCGHHFD----AEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEA 442 + A G + +++ P + I + VL D D Sbjct: 475 SAIAAFERGAELMGLFERHLRLRREVSLVDCNGKSNIPAFQRVLNAFNIPYRVLHDEDPG 534 Query: 443 GKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRK 502 A +++L + L A D+E + G+ Sbjct: 535 NPAEQANNQNILA--LLVAGANQRHLVAPDLEGLL---GYQAP----------------- 572 Query: 503 IISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 R +KP LA+ + +G +P ++ Sbjct: 573 -------RKNKPFLAVSTVEDLHAQGQ--LPAAFREAV 601 >UniRef50_Q6A9G0 Putative uncharacterized protein n=1 Tax=Propionibacterium acnes RepID=Q6A9G0_PROAC Length = 535 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 90/496 (18%), Positives = 166/496 (33%), Gaps = 44/496 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY--HFERD 58 M L R ++ R + L + + + VL+G N GKSSLL L LLL + D Sbjct: 1 MRLTRFKVENHRRLADLDIEVRDHLVLVGANDVGKSSLLRCLDLLLGASTAQLYSRISAD 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF + I T + V + + R+ RL Sbjct: 61 DFR-------APDQPFVIEGTLADFTD----VDKALFPDEIHVDPNTNPSRLVIRLTATV 109 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 E+ +V+ RS +G + + + R +R R + ++ Sbjct: 110 DENETVVISRSAP--EGGTGRQLSRDQVLGLGWKFLSATA--QTRDLREDRKSALDDILQ 165 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLS-AMVQLLEHYFSEQGAGQARYRLMRRRA 237 + S L ++ +GL ++ L ++ A + A Sbjct: 166 AVDLGEEEAAFEAIAKSLTTTLGSSKVLEGLRGSLADQLSKALPDKVAQDDLAFVPGAAA 225 Query: 238 SNEQRSWRYLDIINR----MIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 N+ S L + + + + + + L+ L ++ I+ Sbjct: 226 DNDVLSDVRLQVSKQGVAPDLSEQSDGTRALYAIALY----------DLMSVGANMVGID 275 Query: 294 DPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 +PE LHP LL Q++ T+S +++ + + + A + Sbjct: 276 EPEIHLHPSSQRSLARLLRSNANQKVIATHSADIVGAFDPDSIVVVR---GGGEAVQPKA 332 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 LS ++ + +R +R L AR ++VEG ++ ++ LA + D G+ +IE Sbjct: 333 GFLSDDERMAVRLWVR-DRLEPLTARRVVVVEGISDRIILEHLADLTDRNLDRLGVSLIE 391 Query: 414 FAQSG-LKPLVKFARRMGIEWHV--LVDGDEAGKKYAATVRSLLNNDREAEREHLTALPA 470 G + PL K G + L+D D + L + + Sbjct: 392 AGGCGDMGPLDKLFGANGFRVSMSQLIDADAE-----EALAKKLGVEVADLAGRSVWVSR 446 Query: 471 LDMEHFMYRQGFSDVF 486 D+E R SD Sbjct: 447 SDLEDEYVRALGSDAV 462 >UniRef50_Q73M88 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73M88_TREDE Length = 596 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 93/587 (15%), Positives = 181/587 (30%), Gaps = 78/587 (13%) Query: 1 MILERVEIVGFRGINRLSLMLE----------QNNVLIGENAWGKSSLLDALTLLLSPES 50 M L +++ FR R + NVL+GEN GK++++DA+ L+L +S Sbjct: 1 MYLSEIKLWNFRKYGRNDFDINVPHLVVPFHQGMNVLVGENDSGKTAIIDAVKLVLKTQS 60 Query: 51 -DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + DDF+ L I L F + + C+ + Sbjct: 61 YEWLRVTDDDFY-------NESDRLRIELLFEDLTDDEAKNFIEWL---CYKKQGNQPAV 110 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR-RI 168 I+ R+ E+ + + + + G + + +AR +++ + LRDA Sbjct: 111 IYLRVVFEARRNPKTKKITTTDIRAGEGSALYLLTSEAREYLKVTYLKPLRDAENELMPG 170 Query: 169 RNGTVPNVPNV----------EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + + N+ E L + + + QI A ++ Sbjct: 171 KYSRLSNILLAHEVFTKEETHENFINHLQEFNLFVDNFFSGNDEMQISDTEGAAIKEQLD 230 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 + + + + L + PG + + + + Sbjct: 231 EYLQSFCFNDEKARFSMSETTLKSILGKLQLSLEKTQNPGLGTLNRLYMA-----AELLN 285 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP-LQRIATTNSGELLSLTPVEHVC 337 R + D L LIED E LHP L L +Q I TT+S L S ++++ Sbjct: 286 LQRKNWDGVKLGLIEDLEAHLHPQAQLKVIEKLQRLKDVQLILTTHSPNLASKINLKNII 345 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 ++ + LS ++ + + + + FA+ + VEG +E + A Sbjct: 346 LCA--NNTCYPMGHEFTKLSDDNYCFLQTFLDVTKANLFFAKGLIFVEGWSEQVFLPSFA 403 Query: 398 RQC------GHHFDAEGIKVIEFAQSGLKPLVKFARRMG------IEWHVLVDGDEAGKK 445 + G+ +I G +R I V+ D D + Sbjct: 404 KLLKKLGMIKKDITQAGVSIINIQSIGFFNYTHIFQRKNNNESIPIPIAVITDSDVKYYE 463 Query: 446 YAATVRSL-------------------LNNDREAEREHLTALPALDMEHFMYRQG-FSDV 485 + L E+ +Y+ F ++ Sbjct: 464 KDKDTAEIRIKTDIEIEQALSEKMTKLTKKYDTNNNIRLFVTKEWTFEYALYKSTVFGNL 523 Query: 486 FHRMA-----QIPENVPMNLRKIISKAIHRS-SKPDLAIEVAMEAGR 526 F +I + + K + S +K +A +A Sbjct: 524 FEETVKKVHPRITSDSSSFEEALAQKLLSDSLNKRKIAYLLASGLDN 570 >UniRef50_A1S4L2 ATP-dependent endonuclease of the OLD family n=1 Tax=Shewanella amazonensis SB2B RepID=A1S4L2_SHEAM Length = 603 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 80/560 (14%), Positives = 169/560 (30%), Gaps = 81/560 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L +++I FR I+R+ L LIG N GKS++L A+ L+ R+ Sbjct: 3 MELSKIKISNFRSIDRIEFTLRNYTSLIGPNNAGKSTVLSAIDCFLNQIKPQLSDWRNHN 62 Query: 61 WFPPGDIN-------------------GREHHLHIILTFRESLPGRHRVRRYRPLE---- 97 + P I + + +H+ L + Y Sbjct: 63 YDEPVIIECLFTNLQPWESTCPGVAGIVQNNEIHLRLVASADVANSSVNVEYEAYIREEQ 122 Query: 98 -ACWTPCTDGYHRIFYRLEGESAEDG-------SVMTLRSFLDKDGHPIDVEDINDQARH 149 W+ + + E +G + ++ L ++ + Sbjct: 123 IEGWSSGWRDLSQTIKEIASERGFNGTSWKTVSNREVIKQHLRENHPELIAAGDYIWTSE 182 Query: 150 LVRLMPVLRL---------------------RDARFMRRIRNGTVPNVPNVEVTARQLDF 188 + + P L+ + F + + + +P V E Sbjct: 183 GISIKPALQQALPKCVVIPAVSKIGDDLKTTGKSPFNQLLSSVVMPAVARSEEFRGLQSA 242 Query: 189 LARELSSHPQNLSDG--QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 + D +IR+ + + L + + N + Sbjct: 243 IQLLTDKMRGQSEDEFEEIRRITDLLTERLSSILDAEVIMSLNSPDFEK-FINSGATLLV 301 Query: 247 LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSV 306 D D G + R + L T+ + + ++ LLL E+PE +HP ++ Sbjct: 302 NDGHTTSPDNQGSGAQRALTFALLETITKMEIAQEGEQVKSTLLLFEEPELYIHPHLMRK 361 Query: 307 AWHLLNLLP----LQRIATTNSGELLSLT-PVEHVCRLVRESSRV-------AAWRLGPS 354 +L + Q I+TT+S L+ + + + R + Sbjct: 362 LKSILETIGASNHWQVISTTHSPFLIDVASDPMSLVLVSRNGRGSPTELKQLQSDPFSNV 421 Query: 355 GLSTEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINELARQCG-HHFDAEGI-- 409 + + + + F+ + FA +LVEG+TE + D + Sbjct: 422 ENGDRERQALRATLDFHPTVCEAFFASRVVLVEGDTEVAIFKRAYEILDALEMDTSNVEN 481 Query: 410 -KVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 ++ P + + + + ++ D D G+ + + A + +A Sbjct: 482 TTIVSCGGKWTIPAIARLLANFEVPFRIVHDLDRKGRTDDELQVATGIDPYRANAKIDSA 541 Query: 468 LPALD-------MEHFMYRQ 480 P +D +E ++ Sbjct: 542 APNVDKFLVEDTLEDLLWPN 561 >UniRef50_A3HXK2 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXK2_9SPHI Length = 631 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 84/584 (14%), Positives = 185/584 (31%), Gaps = 56/584 (9%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLL--LSPESDLYHFER 57 M L +V I F+GI + + N++IGEN K++L+DA+ LL + Y+ Sbjct: 1 MYLSKVHIQNFKGIKSQEFSFDSKLNIIIGENGSHKTALIDAIRLLYNMGNPKKDYYISN 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF F + + + I F + + Y L Sbjct: 61 DDFHFDKT-TSAQATKIEIRYIFDGLSSSEKGALYEYLVIEPTIEYAQIT--LIYELRAN 117 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR---------RI 168 + S T + + + + + LRD+ + Sbjct: 118 NYPKFSYFT---------GASAEQKADSGTFEIFQHYYLGALRDSTNDLLNTKTNMLGSV 168 Query: 169 RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLL--EHYFSEQGA 225 V + + + EL + L+ + + L + ++ Sbjct: 169 IKRIVERAKTEDEFKKIIQTANTELLKRDEVLNTRTGVNEHLDDIFKISKDNQIGMRIEE 228 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 ++ LD + + +I + + ++ + + + Sbjct: 229 SSKIESILNVIKPYLPHDKTKLDNDGFNLWQNSLGFNNLIYIAIILGDIKQRT--VDNPN 286 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLV- 340 +LLIE+PE LHP + + L Q T++S L S ++++ + Sbjct: 287 QHFVLLIEEPEAHLHPQLQLNLYDFLKTAGSPNNCQLFITSHSPTLTSKANLDNLILVSQ 346 Query: 341 -----------RESSRVAAWRLGPSGLSTED----SRRISFHIRFNRPSSLFARCWLLVE 385 RES + L+ ED +++ ++ + FAR L VE Sbjct: 347 NAINIGGCYEDRESENIIEISTKKITLTDEDFSSRKKQLERYLDVTKSQLFFARGILFVE 406 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEWHVLVDG 439 G +E ++ +R + + +++ P + R+ + ++ D Sbjct: 407 GISEKLLLKTFSRILKSNLEDYRCEIVNIEGVSFYPFIHLFNSKDSSKRISQKASIITD- 465 Query: 440 DEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMN 499 D+ K + ++L + L + + + + + + Sbjct: 466 DDRYSKAKNSFKNLTSKTFSRLDAFHKGLYSAKINNRISNLKSTIASRKHKVELFTAFKT 525 Query: 500 LRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 L I+ + ++K D + + +S L++K + Sbjct: 526 LEFEIAYSNIANNKTDFKKNFLITYLNKIDNSKYLLIQKYVDNL 569 >UniRef50_C0YH13 RecF/RecN/SMC N domain protein n=2 Tax=Bacteria RepID=C0YH13_9FLAO Length = 703 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 95/613 (15%), Positives = 189/613 (30%), Gaps = 78/613 (12%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M + + I FR E N +IGEN GK++L AL +L+ Y +F + Sbjct: 1 MYISGLSIRNFRNFKSAHFKFTEGINTIIGENGSGKTNLFYALRILIDDSLPRYINFNSN 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE--- 115 DF G+ G H + I + F C + G + +++R + Sbjct: 61 DFNRGIGNWAG--HWIVITVFFEGLDASEEAQALAVQSSGCMDTPSKGSYSVYFRPKYQF 118 Query: 116 ---------------------------------------GESAEDGSVMTLRSFLDKDGH 136 G+ ++D + DK Sbjct: 119 RKELYDYSILAEKDSEGLELLLDKITIADYEVVYLSRGSGDFSDDVTYEKYVGNFDKIEF 178 Query: 137 PIDVEDINDQARHLVRL----------MPVLRLRDARFMRRIRNGT----VPNVPNVEVT 182 P E + + LRD R + + V Sbjct: 179 PDPDEKEELVIGTYLPREISIHNEVSCTFIKALRDVEADLRSYSNNPLINLLKGKEKTVE 238 Query: 183 ARQLDFLARELSSHPQNLSD----GQIRQGLSAMVQL--LEHYFSEQGAGQARYRLMRRR 236 + D + + + + +S +I+ G+ ++ Y M + Sbjct: 239 ITKQDEIITSIDNLNEKISSLDEIIEIKNGIDKSIKNAVGTTYAPSIDIKSELPNKMEKL 298 Query: 237 ASNEQRSWRY-LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 + + D + +I L L + T R+ LLIE+P Sbjct: 299 FQSLKLWVGDPEDDYKGRVWELSLGGANLIYLSLKLLEYERVKTDRIA----NFLLIEEP 354 Query: 296 ETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSG 355 E +H + ++ L+ Q I +T+S + S + + V + R + ++ + Sbjct: 355 EAHIHTHIQKTLFNNLSKSNTQIIISTHSTHISSASKISSVNVICRGKNEALVFQ-PSNN 413 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIEF 414 L RR+ ++ R + LFA+ +LVEG+ E +I + G D G+ +I Sbjct: 414 LLPNQIRRLERYLDAVRSNLLFAKGVILVEGDAEQILIPAMFEVVFGLSLDEIGVSLINI 473 Query: 415 AQSGLKPLVKFARRMGIE--WHVLVDGDEAGKKYAAT-VRSLLNNDREAEREHLTALPAL 471 +G + + I+ +L D D + K + N + + Sbjct: 474 GSTGFENVANIFHEERIKKYCAILTDQDISVVKLPDSPENDTPNQKHFRASQKSGEERRV 533 Query: 472 DMEHFMYRQGFSDVFHRMAQIPENVPMNLR--KIISKAIHRSSKPDLAIEVAMEAGRRGV 529 + + + F+ ++ MN + +S K + + Sbjct: 534 IITELCKDNEYLEAFYATHTFEVDLLMNENSPEFVSALDKIYRKESNIKLITKRLENPNI 593 Query: 530 DSVPTLLKKMFSR 542 + ++ + Sbjct: 594 QVAGLEVLRLAKK 606 >UniRef50_A5FWN1 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWN1_ACICJ Length = 647 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 73/393 (18%), Positives = 134/393 (34%), Gaps = 16/393 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + R+ I FR + L + L + VLIG N GK+++LDA+ ++L+ F + Sbjct: 9 MRITRLHIENFRSVRNLDIELGETTVLIGPNNAGKTAILDAVRIVLTRRWGQRGTGFTEN 68 Query: 59 DFWFPPGDINGRE-HHLHIILTFRESLPGRHRVRRYRPLEACW-TPCTDGYHRIFYRLEG 116 D P D + R + I++ ES G LE + + ++ Sbjct: 69 DVHRPEPDGDPRTLPPVRIVIAMEESRSGEWDPDMVAALEDIITVTADRMRNLLTVQVTC 128 Query: 117 ESAEDGSVMT-LRSFLDKDGHPIDVEDINDQARHLVRLMPVL---RLRDARFMRRIRNGT 172 +E+ FLD G P+ MP+ LRDA R+G Sbjct: 129 AWSEEKEAFDPAWQFLDSAGVPLRERRRAINLTGFFSYMPLFWLGALRDATNEFTPRSGH 188 Query: 173 VPNVPNVEVTARQLDFLA-RELSSHPQNLSDGQIR-QGLSAMVQLLEHYFSEQGAGQARY 230 + +L+ A R L+ ++ R ++ M+ +G G AR Sbjct: 189 WGRLLRSVRIPDELEAEALRILAELDARIAAADPRLAEIAEMIGQATRVAIGEGPGGARL 248 Query: 231 RLMRRRASNEQRSWRYLDIINR-----MIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 + + + + G + ++ LF + + Sbjct: 249 ATLPLGIEEMLQRTGIVLRNEELRPWLPLGHHGQGLQSLAVIFLFQAAVLQQLAEAERPG 308 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 + IE+PE LHP W + L Q++ +T+S L P+ + + Sbjct: 309 VEAVFAIEEPEAHLHPQAARTLWEHVQALAGQKLMSTHSPYFLQHVPLRDIRLVCLRGGC 368 Query: 346 VAAWRLGPSGLST-EDSRRISFHIRFNRPSSLF 377 L +S + ++ + + F Sbjct: 369 TEIATLPRYVVSDLPWNDAVNGFLNGSAGRIFF 401 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 4/190 (2%) Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSG 418 ED + FH R R FAR W++VEG TE +++ L + G D G+ VI+F QSG Sbjct: 454 EDEEELGFHGRRVRGEIFFARRWIMVEGVTEYLLLHALGKALGWPLDDHGVAVIDFQQSG 513 Query: 419 LKPLV-KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 + A GI W+++VDGD G+K+ + +D E E +T P D+E + Sbjct: 514 NAGIYPALAEAFGIPWNMIVDGDHEGEKFRRQIIDRGFDDEELEGRFVTLTPQNDLEDQL 573 Query: 478 YRQGFSDVFHR-MAQIPENVPMNLRKIISKAIHRSSKPDLAIEVA--MEAGRRGVDSVPT 534 G + +A I ++ +A ++ K ++ + A +P Sbjct: 574 LADGHEQMLREILADIGGRSALDCPPDEFRARLKNRKTGYMGVLSLRVAADEALARRMPA 633 Query: 535 LLKKMFSRVL 544 + + + Sbjct: 634 RFVDLVTALR 643 >UniRef50_D1PF96 Putative uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PF96_9BACT Length = 585 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 99/610 (16%), Positives = 194/610 (31%), Gaps = 92/610 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQ----------NNVLIGENAWGKSSLLDALTLLLSPES 50 M + +++ FR L NVLIGEN GK++++DA+ +L + Sbjct: 1 MYISELKLWNFRKYGADDFDLTNPHLTVPFKSGMNVLIGENDSGKTAIIDAIKYVLKTNA 60 Query: 51 -DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + +DDF+ + HL I L + + P +G Sbjct: 61 YESIRILQDDFYND-------KDHLRIELLIDDVTDDEAK-----NFTEISAPKENGGMA 108 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR-I 168 + +DG + +++ + G D + + +R+ + LRDA Sbjct: 109 SIKLVLDVVRKDGHI---QAYEVRGGFDADGHSLTPLMKDNLRITYLKPLRDAENELTAK 165 Query: 169 RNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA 228 +N + + + EL N + + + +E++F + G+ Sbjct: 166 KNSRLSQILQ-----------SHELLKQNSNGEKHDLIKIIEEANAKIENWFDDDTGGET 214 Query: 229 RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVI-------------LLGLFATLLQ 275 ++ + ++ D ++ LG L Sbjct: 215 SHKRQIKGVIDQFVKLFISDDAESQFLLADPTMKNILERLAISVVNSKNLGLGTLNRLFM 274 Query: 276 AKGTLRLDKDARPL--LLIEDPETRLHPIMLSVAWHLLN-LLPLQRIATTNSGELLSLTP 332 A L L K L LIE+ E +HP L +Q I TT+S + S Sbjct: 275 ATELLHLKKKGDNLKVCLIEELEAHIHPQAQMKVISALQQEESVQFILTTHSPNITSKVK 334 Query: 333 V----EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGET 388 + + L+ S V G + L +D + + + + + FA+ +LVEG Sbjct: 335 LGKDTDVNSILMCNSDNVFPMGAGYTKLEKKDYKFLDTFLDVTKSNLFFAKGVILVEGWA 394 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR-----RMGIEWHVLVDGDEAG 443 E +I +A + G I V+ + + M ++ ++ D D Sbjct: 395 EEILIPVIASKMGFDLTQHEISVVNVGSTAYLHFARVFMRRSEPEMKVKCAIVTDLDVRP 454 Query: 444 KKYAATVRSLLNNDRE-----------------AEREHLTALPALDMEHFMYRQGFSDVF 486 + + E L + +++ ++V Sbjct: 455 DTEDKAQKEREKKESVEHNLGMPLPTNVKLNLAKEWTLEWCLFKSPILSDLFKDSVAEVH 514 Query: 487 HRMAQIPEN------VPMNLRKIISKAIHRS-SKPDLAIEVAMEAGRRG-----VDSVPT 534 R + ++ K+ +K I RS K D+A+ ++ + D Sbjct: 515 SRTEEFKKDAVTHQYTESFEAKLKAKLIDRSLEKTDIALVLSEKIITNDLNFAQQDEYIK 574 Query: 535 LLKKMFSRVL 544 L V+ Sbjct: 575 YLLDAIRFVV 584 >UniRef50_D0SCV0 ATP-dependent OLD family endonuclease n=2 Tax=Acinetobacter RepID=D0SCV0_ACIJO Length = 693 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 74/529 (13%), Positives = 155/529 (29%), Gaps = 90/529 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M +E+V + G+R + + ++LE+N V++G N GK+S F +D Sbjct: 1 MRIEKVRVEGYRLLEDIEIVLEKNSTVIVGRNNSGKTSFTSIFDCFCGESGA--RFRLED 58 Query: 60 FWF-----------------PPGDINGREHHLHIILTFRESLPGRHR------------- 89 F P I + + LTFR Sbjct: 59 FSSLSREKFLNARKLKEEGASPEQIYNTLPIITLSLTFRYDSDAPTLGPLSPFIIDLDMD 118 Query: 90 -------------VRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLD-KDG 135 + + L P +I + + S +D D Sbjct: 119 STTAIACIEYRPVLAKMHLLFDLPQPPVGMEPQIHFFKCLRNNLSKIYEVHVSAIDPTDK 178 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV----------PNVEVTARQ 185 + L++ V R + + + P + ++ Sbjct: 179 SNKRNFEGTSAFAALLQCNFVQAQRTLDKTKLGEADVIGKLLSELFKTAAAPTATESDQE 238 Query: 186 LDFLARELSSHPQNLSDGQIRQGLSAMVQL-----LEHYFSEQGAGQARYRLMRRRASNE 240 L ++ + + L ++ + + + + + + Sbjct: 239 LAAKLKKSVEDIELNVQSDFDKMLKKLLPVMGVMGFPSLNDTELRPETSLNVEALLSGHT 298 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 + + D ++ G + +I + L ++ + + L+ IE+PE LH Sbjct: 299 KVVYSGTDGVHLPEGYNGLGTRNLIYMLLQLESYHKIYRSQITRPSAHLIFIEEPEAHLH 358 Query: 301 PIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 P M V + LN +Q I TT+S + + + V + V Sbjct: 359 PQMQEVFINQLNAAIQKLSSAYPAEDVWNVQFIITTHSSHVANAACFDAVRYFYNQKDSV 418 Query: 347 AA--------WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 + ++ G +S+ D + ++ + FA ++VEG TE ++ L Sbjct: 419 KSIRNTKVKDFKKGMQTISSADKEFLHKYMTLTKCDLYFADKVIMVEGTTERLLMPRLRE 478 Query: 399 QCGHHFDAE------GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDE 441 + IE + + ++ V+ D D Sbjct: 479 LVDISLPEHQKLASQYVTCIEAGGAHAHVFYPLLDFLELKTLVITDLDS 527 >UniRef50_Q11KX7 ATP-dependent endonuclease of the OLD family-like n=6 Tax=Bacteria RepID=Q11KX7_MESSB Length = 615 Score = 192 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 91/610 (14%), Positives = 179/610 (29%), Gaps = 86/610 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + R++I FRG+++ + + +L+G N GKS++ +AL L+L PE + Sbjct: 1 MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEH 60 Query: 59 DFWFP-PGDINGREHHLHIILTFRESLP------GRHRVRRYRPLEACWTPCTDGYHR-- 109 DF +G + I + G H R +G + Sbjct: 61 DFHCGRYLTEDGAPVEIRIEAILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQAD 120 Query: 110 -------IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQA-------------RH 149 + G D +F D +D D + + Sbjct: 121 APGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALDEETEIKLGQGRVPFTRVHKR 180 Query: 150 LVRLMPVLRLRDARFMRRIRNGTVPNVPN-------VEVTARQLDFLARELSSHPQNLSD 202 L + + LR ++ G++ + VE+ L L + + Sbjct: 181 LCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL 240 Query: 203 GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY---LDIINRMIDRPGG 259 QIR + + + + + + R E R G Sbjct: 241 KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGT 300 Query: 260 RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRI 319 S +++ L + L + +E+PE L P + Q I Sbjct: 301 GSINLLVFALLTFIA------ELKDKQSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSI 354 Query: 320 ATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFAR 379 T++S ++ + L R+ + + + R ++ +R Sbjct: 355 VTSHSPYVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTERR---QFAEAILSR 411 Query: 380 CWLLVEGETETWVINELARQCG--------HHFDAEGIKVIEFAQSGLKP-LVKFARRMG 430 L+VEG TE + + HFD G+ V + P +G Sbjct: 412 AVLVVEGSTEASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALG 471 Query: 431 IEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMA 490 D K AA + L ++ + P +E+ + +Q V R Sbjct: 472 KLAFGFYD-----KPNAAFGQDSL--EKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFL 524 Query: 491 QIPENVPMNL-----------------RKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVP 533 ++ + KA + A+ +A + +P Sbjct: 525 NEVKDRSDYPAVGAYDPAAGDADAAALATKVLKARKGEAYGYAAMLIAQ---CQTAAELP 581 Query: 534 TLLKKMFSRV 543 ++++ + Sbjct: 582 ATIREILEAI 591 >UniRef50_A1TS10 ATP-dependent endonuclease family protein n=5 Tax=Proteobacteria RepID=A1TS10_ACIAC Length = 641 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 97/641 (15%), Positives = 200/641 (31%), Gaps = 115/641 (17%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH--FERD 58 M + R+EI FRGI +L L Q+ VL+G+N GK+++L+A+ L+L P+ + Sbjct: 1 MQVARIEIHNFRGIREATLDLVQHAVLLGDNNTGKTTVLEAMDLVLGPDRLNRTPPVDEH 60 Query: 59 DFWFP----------------------------------------------------PGD 66 DF+ G+ Sbjct: 61 DFFLGRYLPESSVGAEEDKADEEVVDHPGDIQQVAEGQVPEQGIPVAGEQTEGAGAPAGE 120 Query: 67 INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR---------------IF 111 + I +T + R+ W ++ + Sbjct: 121 PEVPAPQIRIGVTIANLSEEQ--QGRFGDYIEFWDSKEKKLYQDPAPEGVDAATVSPALR 178 Query: 112 YRLEGESAEDGSVMTLRSFLD---KDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRI 168 G+ + ++F DG P+ + Q L L LR R R Sbjct: 179 VTFIGQYDPEEDDFEGKTFYTVTLSDGAPVPFTKKDKQVCGL------LYLRSVRTGSRT 232 Query: 169 RNGTVPNVPNVEVTARQLD-FLARELSSHPQNLSDGQ-----IRQGLSAMVQLLEHYFSE 222 + ++ ++ + +++ + + +S + I L ++ L+ Y + Sbjct: 233 LSLERGSLLDIILRLKEVRPQMWEDAIGRISAISVAEDPSLGISGVLESINTALKKYVPK 292 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + ++ + + + D + G L+ A + Sbjct: 293 EW---GIEPHLKVSNLTREHLRKVITAFIATGDGTHAAPFYRQGTGTINMLVLAMLSQIA 349 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRE 342 + + +E+PET + P H + L Q + T++S +L + L R+ Sbjct: 350 EDKQNVIFAMEEPETAIPPYAQKRIIHEVRKLASQTLFTSHSPYVLEEFSLPETIILSRD 409 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 S + G + + +R R L AR L+ EG TE R+ Sbjct: 410 GSGS-LKQSGVTLPDSVKLKRYRQEFRTRFCEGLLARRILIAEGATEASAFPAACRRLAE 468 Query: 403 -------HFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 ++ G+ V++ G P + K R +G L D + + Sbjct: 469 LNPAVYASLESLGVCVVDAGGEGSIPDMAKMYRSIGKRTFALCDLQSPEAQALIKAQ--- 525 Query: 455 NNDREAEREHLTALPALDMEHFMYRQ---GFSDVFHRMAQIPEN---VPMNLRKIISKAI 508 EH+ +E+ + + D F + P++ + + + A+ Sbjct: 526 -------VEHMFMHGEKGIENLVLKNTSKAALDRFSDLLDWPQDLLEKFKDPKADVVNAL 578 Query: 509 HRS-SKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 +K + +A + VP +++ + L + Sbjct: 579 MAYFAKKKGDMGIAEFIAQCDEAEVPQWIREACVHLKALCQ 619 >UniRef50_B2GJX2 Putative uncharacterized protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJX2_KOCRD Length = 692 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 96/531 (18%), Positives = 159/531 (29%), Gaps = 87/531 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L V I FR + L L Q LIGEN GKSS+L A+ +L + +DF Sbjct: 1 MRLTNVRIKNFRAHSNTELPLPQLGCLIGENNAGKSSVLHAIQYVL----EDRKLSAEDF 56 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEA-----CWTPCTDGYHRIFYRLE 115 P + I + HR R L+ T DG Y Sbjct: 57 RNPELPASVELSIEGIDEEDLRRVNETHRDRVREMLKDGVLTIVRTQEIDGKAESRYLKP 116 Query: 116 GESAEDGSVMTLRSFLDKDGHP-------------------------------------- 137 G S +L S + Sbjct: 117 GPRDPSWSQESLASTIKGKKGAQLRQAAVELLPPMEDALPPAPSQQQVKDAWTKLVEQLP 176 Query: 138 ----------IDVEDINDQARHLVRLMPVLRLRDARFM-RRIRNGTVPNVPNV--EVTAR 184 L ++ + ++DA + + + + + A Sbjct: 177 PEELEERPTAYPTGIAQSVKPLLPSVIYIEAVKDASVEAKSTGSSAFSKLLELLFDEVAD 236 Query: 185 QLDFLARELSSHPQNLSDG------QIRQGLSAMVQL---LEHYFSEQGAGQARYRLMRR 235 Q + + S Q L+ ++ L A+ ++ +E + G + + Sbjct: 237 QFSDINDQFRSVYQKLNRSLNDDGLEVDARLEAVQRIESTIEEFVRASFPGVSLRMDVPA 296 Query: 236 RASNEQRS---WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGT------LRLDKDA 286 + S R D I G R +L L + T Sbjct: 297 PTLSMLLSGAELRIDDGHEGSISSKGDGLKRTVLFALLRAYASIRSTGLSDDTRSESPRP 356 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVRESS 344 +LL E+PE LHP L Q + TT+S E RL + Sbjct: 357 SYVLLFEEPELYLHPRAQRQLMAALGTFSNEHQVLVTTHSPGFFRP-GTEGFARLQKTDD 415 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 V A + + + + + N ++ FA+ +LVEG+++T+ LAR + Sbjct: 416 GVTAHPVDLTIGHRDAYQIVQHE---NNEAAFFAQRVVLVEGDSDTFTYPHLARLINQDW 472 Query: 405 D--AEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 D + I ++ + +F I HV+ D D + + R Sbjct: 473 DDIDKNIMFVKIDGKGNINRYREFFSSFKIPIHVITDLDALVRGFEQLTRD 523 >UniRef50_A8SH00 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH00_9FIRM Length = 577 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 79/516 (15%), Positives = 167/516 (32%), Gaps = 44/516 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+ VE+ FR I + S+ + L+GEN GK+++L AL + + Y +E +DF Sbjct: 1 MRLKSVEVENFRAIKKCSIRFNELTALVGENNSGKTAILRALNSVFN-----YEYEENDF 55 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 R I + F + P E + + H + R ++ Sbjct: 56 INGAHRYAPRTVT-KIKVHFCDL-----------PAEDFYREISGEDHELHLRFIYNYSK 103 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV--PN 178 L ++ + ++ + + + + + + R +R + + + Sbjct: 104 SSGGRKLYVEVNGEKKNLEPDKLGK-IKQDIDFIYIPANRSSRDIEWDEHTVFSRLVMHY 162 Query: 179 VEVTARQLDFLARELSSHPQNLSD---GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 ++ R D L+ ++ + D Q+ + L+A+ + E Q + Sbjct: 163 LDDYTRNSDRLSPKVIEAGDKIIDRVLPQLARDLTALN-MCEDVGKYQFNFKQSIDYRIF 221 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 + + + G + ++ L L Q + +L IE+P Sbjct: 222 LDKLGLEIINPEETQSLPVSEYGSGIKSLTVIALHRMLAQL-------GNTSIVLGIEEP 274 Query: 296 ETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRLVRESSR-----V 346 ET LHP + + L Q I T+S ++ + + + + Sbjct: 275 ETNLHPQAQRMLINSLKTGRQTCETQAIFATHSTVIVDALDHDDIVLVRKVRDENRGSHS 334 Query: 347 AAWRLGPSGLSTEDSRRISFH--IRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 A +L + D + + + R+ FAR +L E T+ VI +L Q + Sbjct: 335 EAKQLPTTFWEDHDIQELKHYNFFRYRNSDFFFARYVILTESTTDAQVIEKLLNQGNTN- 393 Query: 405 DAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAERE 463 + ++ +GI + +VD D ++ + N + Sbjct: 394 KLYYVSIVNLDGVKNIRYPFFLLHDLGIPFCAVVDKDFFTTYKHGSLDASRNGNNYLPEY 453 Query: 464 HLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMN 499 ++ D + Sbjct: 454 SGEVSNNKVIQFLFDTDEKKDELKNYLGKSYSQFFE 489 >UniRef50_B9JB64 Chromosome partition protein n=3 Tax=Alphaproteobacteria RepID=B9JB64_AGRRK Length = 604 Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 96/511 (18%), Positives = 167/511 (32%), Gaps = 39/511 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++EI FRGI + + VL+G N GK+++++AL LL + + DF Sbjct: 1 MQIAKLEIENFRGIREGVVRFAPHTVLVGSNNCGKTTVVEALALLFGRDRMVRQLTEHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRV--RRYRPLEACWTPCTDGYHRIFYRLEGES 118 + R + ++ F +H R R + W P + Sbjct: 61 YGSNPQPADRIRLVATVIDFDGDDSAQHMDWFRDDRGIVKWWNPVDGTVMPARTDPSWKL 120 Query: 119 -----------AEDGSVMTLRSFLDKD--GHPIDVEDINDQARHLVR---LMPVLRLRDA 162 V TLR F D D G E+ + L+R V R Sbjct: 121 ACQVAFAARFHRPSLEVETLRYFHDDDAVGDVFADENATAFSARLIRDIGFFFVPATRTW 180 Query: 163 RFMRRIRNGTVPNVP---NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHY 219 + V + + L R + + D ++ ++ + Q L + Sbjct: 181 DRTVSFGSELFRRVVAAGEGQPSESVLSERDRLRAPDARLEQDERLAPIVNRLNQELRGF 240 Query: 220 FSEQGAGQARYRLMRRRASNEQ-RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 F R + E S + + + S + L LL G Sbjct: 241 FRTSPTLHLRVTATDSDSLLESVVSHYAHEGADLPLPARRHGSGLLSL--QHLLLLLQFG 298 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCR 338 +R + + + +E+PE + P + H + L Q +T+S + +L + V Sbjct: 299 RMRAEANEGFWMALEEPELHVPPALQRRLVHRIQALSRQTFVSTHSPMVAALADPKGVAV 358 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFA---RCWLLVEGETETWVINE 395 L + + A L S L + + + NR ++ A L+ EG T+ + Sbjct: 359 LRNDGGLLTAVPLLTSTLPADTPNSVRKLFQVNRVETIAAVMHEFVLVPEGRTDYEWLGL 418 Query: 396 LARQCGHHF---------DAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKY 446 L R H + VI + V+ + +VDGD G Y Sbjct: 419 LVRAVDLHQGWAAADECRFDAFVGVIPTHDGAVVRTVEAMAPLHPRVAAMVDGDVEGVGY 478 Query: 447 AATVRSLLNNDREAEREHLTALPALDMEHFM 477 AAT L+ L +E + Sbjct: 479 AAT---LVAAGSPNSGVILRWADGQMLEDTI 506 >UniRef50_A4AHR4 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHR4_9ACTN Length = 668 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 86/571 (15%), Positives = 160/571 (28%), Gaps = 110/571 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDL------YH 54 M + + + +R + R+ L + L+G N GKSS+L AL + YH Sbjct: 1 MKVSHIVVENYRSLRRVELSVTDYTALVGANGSGKSSVLYALQWFYEGGALEGEDICGYH 60 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRE------SLPGRHRVRRYRPLEACWTPCT---- 104 D + + +TF + S + W Sbjct: 61 RPADGEVLDESSDAIAARTVSVTVTFSDLTSQDRSRLREYGRGDTAVFRKSWVLGDAKPK 120 Query: 105 -------------------------------------------DGYHRIFYRLEGESAED 121 ++ L A+ Sbjct: 121 VVGNAKQGPGFAELRTMKLVGDFRPAYASLRHSQEGLPDLGGSPSRDQVSDALVAWEADP 180 Query: 122 GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEV 181 + +L D D + + D + RL+ + + + Sbjct: 181 ANGASLVDIADNDANHMFGIDGPNIILRCSRLVLIPAAAEISNQVGSSGKGSALGDLIGA 240 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSA-------------MVQLLEHYFSEQGAGQA 228 AR ++ + +L+E + + Sbjct: 241 FMSNAGATARAKWQSTYADELAELNSSVKRSVEASTGLQASRINSKLVELVPNAAVSFVP 300 Query: 229 RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL-------------- 274 + + +D + + G R I++ +F +LL Sbjct: 301 AVPDWTPKGEASVTTDVTIDGTTNDVSKQGHGIQRAIMIAMFQSLLPDAALLAGSHNAHA 360 Query: 275 -------QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTN 323 QA+ L ++ IE+PE HP+ +L L Q + T+ Sbjct: 361 DETVDEAQARLQEELANLPTLVVCIEEPEIYQHPVRARAFARVLAALASQQGGQVLLATH 420 Query: 324 SGELLSLTPVEHVCRLVRESSRVAAWRL---GPSGLSTEDSRR----ISFHIRFNRPSSL 376 S + V R S R G + LS ++ + + + + Sbjct: 421 SPYFVRPDQFSSVRRFRLVSGVSKVRRTSLAGVAALSGDEEVKVQKILEKRLPTSFSEGF 480 Query: 377 FARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHV 435 FA +LVEGET+ V+ +A G D+ G+ V+E + + + I +V Sbjct: 481 FADAVVLVEGETDKAVLEAIAEVLGQPLDSIGVCVLEVSAKDSLKIPYSLFSALEIPTYV 540 Query: 436 LVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 + DGD G R+ + EA H + Sbjct: 541 IADGDALG-----AARTYPDKQNEAANAHAS 566 >UniRef50_C7NQX8 SMC domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NQX8_HALUD Length = 584 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 88/595 (14%), Positives = 192/595 (32%), Gaps = 57/595 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++I FR I S+ L N+LIG+N GKS+++ A+ + + + DF Sbjct: 1 MQVTEIDIENFRSIPETSIGLGDFNLLIGKNNAGKSNIVKAIYRYRDLVAG--NVDISDF 58 Query: 61 WFPPGDINGREHHLHIILTFRESLPG-----RHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 + + + ++++ + + + D Y E Sbjct: 59 YESAVTRGKQPEPIKFSISYQIEEGTRENLIESLSENHEVSASVYDTLMDSESFQKYNHE 118 Query: 116 GESAEDG-SVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR----- 169 E G S T+ + L+ + D++D++ L+ L ++ +R + Sbjct: 119 ISIRETGVSHNTINTCLNGSKVELGTLDVSDESVELLDLDELMDKNRSRHQLSDKPSNQI 178 Query: 170 ----NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 ++ E + ++ R +D + + L+ + Sbjct: 179 NDVIPSSIQGGILGEFSEWKIIAPFRRTEERGVFGADPDLDPTGENLTTFLQSIREDGTG 238 Query: 226 GQARYRLMRRRASNEQRSWRYL-----DIINRMIDRPGGRSYRVILLGLFAT----LLQA 276 ++ R D R + I L ++ +L Sbjct: 239 RYSKICKQYEDIMEGVDEVRIETREDGDGNAVPTIRIDEQQSDDIGLDELSSGAKEILIL 298 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL----NLLPLQRIATTNSGELLSLTP 332 + + + L IE+PE LHP + ++ Q I TT+S + Sbjct: 299 VTQIIVSRSDNSPLYIEEPELHLHPAAEREIYSMITRVAQDYNTQVIVTTHSDVFVDEVN 358 Query: 333 VEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 VE + + R + L I I + L A + VEG ++ V Sbjct: 359 VEDIFSVKR-GDYTYIDTVNQGELGE-----ILTDIGYPTSEFLQADRIVFVEGRSDRVV 412 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGL----KPLVK----FARRMGIEWHVLVDGDEAGK 444 ++ A++ F G++ ++F + P +MGI + + D D Sbjct: 413 LSNWAKKLDLSFSINGVEPVKFGGDEIFEDGNPYTNEIPDLLGQMGIPYKYVFDSDGEDP 472 Query: 445 KYAATVRSLLNNDREAEREHLTALPALDMEHFM---YRQGFSDVFHRMAQIPENVPMNLR 501 + + ++ + + +E ++ R + +I E++P + Sbjct: 473 DKKESE---IASELGLSAAKICVIDGYCIESYLAKPPRALAETLVVEQEEIEEDLPDDPY 529 Query: 502 KI-ISKAIHRSSKPDLAIEVAME------AGRRGVDSVPTLLKKMFSRVLWLARG 549 + + K L + E A + + + +K M ++ + R Sbjct: 530 GVNMKSKFDSLFKKHLGTGYSEEKHGAAVAKKMQPNEISEEMKAMIEDIVTMERR 584 >UniRef50_B0VGE8 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGE8_9BACT Length = 629 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 82/486 (16%), Positives = 165/486 (33%), Gaps = 32/486 (6%) Query: 1 MILERVEIVGFRGINR--LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPES-DLYHFE 56 M L +++I FR L ++ Q NVLIGEN GKS+++DA+ +L+ +S + + Sbjct: 1 MYLLKLKITNFRKYGDPGLEVIFNQGLNVLIGENESGKSTIIDAVRYILNTQSYEYIRVQ 60 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHR------VRRYRPLEACWTPCTDGYHRI 110 DF E + T + + W RI Sbjct: 61 ETDFHCNQAGNRAEELKIECEFTGFTDQEAGNFLEWLGFDENNNFVLRVWLSAIIKTDRI 120 Query: 111 FYRLEGESAEDGSVMTL--RSFLDKDG-HPIDVEDINDQARHLVRLMPVLRLRDARFMRR 167 + G+V R L P+ +I + R +L+ A + Sbjct: 121 IVNTRAGMDDTGTVFESGARDLLRVTYLKPLRDAEIEMSSGRRSRFAQLLKSHPAFQKKP 180 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 + T+ + VE +++ + + + I ++ +E + + Sbjct: 181 NESHTLEEI--VEEADKKIQQYFGQQTGL--TIGTKPIEPEGKIIIDEIEQALNSYTSED 236 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 + + + E + + + P ++ + LL+ G L Sbjct: 237 IKNKPFVSLSGVELWAILQRLSLQIDKNLPSLGMMNLLYIAAEFLLLKRDGYTGLKLVLL 296 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEHVCRLVRESS 344 L LHP L Q I TT+S L S P+E++ V + + Sbjct: 297 EELE-----AHLHPHYQLNVLQYLIDNYNSIGQTILTTHSVILGSSIPLENMI--VCKGN 349 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 RV + L D + + + + FA+ ++VEG+ E ++ +A G Sbjct: 350 RVYPMGHDYTMLDQIDYLFLERFLDATKANLFFAKGIIIVEGDAENLLVPAIADVIGFPL 409 Query: 405 DAEGIKVIEFAQSGLKPLVKFAR-----RMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 + GI +++ K + +G+ ++ DGD +++ + + Sbjct: 410 NKYGISLVKVGSKAWKRYANIFQRTDGSGLGMRVAIIADGDVPCREHLTKYPPKVYTLED 469 Query: 460 AEREHL 465 ++ Sbjct: 470 NNVRYI 475 >UniRef50_C7T9Q2 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus GG RepID=C7T9Q2_LACRG Length = 696 Score = 187 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 84/581 (14%), Positives = 174/581 (29%), Gaps = 69/581 (11%) Query: 1 MILERVEIVGFRGINR-------LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDL 52 M L+ V++ FR L + N+++GEN GK++++DA+ +LL SD Sbjct: 1 MFLKTVKLYDFRKFVSQVNGEPGLIVKFHPGLNIIVGENDSGKTAVIDAIKVLLGTVSDD 60 Query: 53 YH-FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF 111 + +DF+F D + I F + + + + Sbjct: 61 RTSIQDEDFYF---DGTEFSNDFKIEAVFCSLNKYEA-----GTFLEWLSFDDNNEYELH 112 Query: 112 YRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR-IRN 170 +L E + G + AR +R+ + LR+A Sbjct: 113 VKLTVERKTSEAGRQYLDRNLVAGDEGAESSLASGARVYLRVTYLKALRNATDELTPGFR 172 Query: 171 GTVPNVPNVEVTARQLDFLARELS-------------------------SHPQNLSDGQI 205 +P + R +L +LSD + Sbjct: 173 SHLPQLLAAHSEFRNHPEHKLKLVQALEEANAIIEGYLSDGFPSESNPPKDNDHLSDNNL 232 Query: 206 RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVI 265 + ++ + L + Q + + R + + ++ + + Sbjct: 233 EK--QSINKELHSVLRQLFDSQDQDKSDTRFQLTQVTLDQIFKQLSLSSESVNLGLGNLN 290 Query: 266 LLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL--------LPLQ 317 LL + L K ++LIE+ E LH + Q Sbjct: 291 LLYISTELALLKDHSSSVVYGPNIMLIEELEAHLHVQAQIRLIKYIERYILSTEDNSSQQ 350 Query: 318 RIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLF 377 I T++S L + + + +++ + + L D ++ + + + F Sbjct: 351 FILTSHSVALTASIDQRSLIYM--NANKAYSMAPEDTMLEEADYDFLNRFLDATKSNLFF 408 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARR------MGI 431 A+ +LVEG E ++ LA GI ++ + +K + +GI Sbjct: 409 AKGIILVEGYAENILLPALADLINLPLHRSGISIVNVGGTSFNQYIKLFSQKEKSEKIGI 468 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 ++ D D Y S D+ ++ + ++ +A Sbjct: 469 PISIITDSDINPTVYGIDSESAEKIQELISGP-------SDLNVDLFGEEYATFAELVAA 521 Query: 492 IPEN-VPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDS 531 ++ +I + S D A + A Sbjct: 522 FKLRFENTKIKNLIIQVKKFRSDSDWASKTAERQECLNQKY 562 >UniRef50_C7XKH1 DNA helicase associated protein n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XKH1_9LACO Length = 641 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 74/502 (14%), Positives = 163/502 (32%), Gaps = 33/502 (6%) Query: 2 ILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 L+ + I GF+ + + IG N GK++ L AL L S + DF Sbjct: 7 RLKTLLIKGFKSFNEETKIDFSKETAFIGTNGSGKTACLLALNKLFSYNASDRIIHESDF 66 Query: 61 WFPP--GDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 + D R+ ++ + ++ + + + RLE Sbjct: 67 YINSANQDSQSRDLYIEAVFELDKANKDEDKKCEAQYWNRLIIKNGQDKPLLRIRLESTW 126 Query: 119 AE----DGSVMTLRSFLDKDGHPIDVEDINDQARHL--VRLMPVLRLRDARFMRRIRN-- 170 DG+V T F+ + I + L ++ + V +R+ + Sbjct: 127 TNSGIADGTVDTNIYFMTSLEDNNEENKIVARRSELSSIQFIYVPAVRNPERQLSNTSDG 186 Query: 171 ---GTVPNVPNVEVTARQLDFLARELSSHP-----QNLSDGQIRQGLSAMVQLLEHYFSE 222 + V + +++ ++ +L+ L + Q ++ FS Sbjct: 187 MISQLIKRVNWDDEIKQKIVSISSQLNDTFWDEKGSKLIQDTLNQEWKSLEP--NSRFSN 244 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 A + + + + + +D + + A++L + T++ Sbjct: 245 VKASVSSIDINKIMSRIRFEFNSNVTNNVFSVDEMSDGIKSLFYISNIASVLAIENTVQE 304 Query: 283 DK-----DARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPV 333 D + +E+PE + P +L + + Q I T++S ++ Sbjct: 305 DDIKIEYPVVTIFALEEPENHISPHLLGKVMDKVKSITKLDNTQTIITSHSPAIIKRVLP 364 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 E+V V + + + P F++ +L EGE+E V+ Sbjct: 365 ENVRYFHLTKDAVTEVKKIKLPDDKGEKYKFIKRAVQTYPELYFSKLVILGEGESEEIVL 424 Query: 394 NELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 +++ D I ++ A + L + I L+D D +Y + + Sbjct: 425 SKIISSY-TGLDEANISIVPLAGRMVNYLWDLLESLNIAHITLLDLD--YGRYLGGKKRI 481 Query: 454 LNNDREAEREHLTALPALDMEH 475 + E +R + +E+ Sbjct: 482 KDIIDELKRFNPNDDELEKIEN 503 >UniRef50_B5EKT6 ATP-dependent endonuclease, OLD family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5EKT6_ACIF5 Length = 773 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 69/552 (12%), Positives = 143/552 (25%), Gaps = 105/552 (19%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + + FR + + + + +G N GK+S A+ L LS D F D Sbjct: 1 MYVHSLAFKNFRRLKDARVDFADDLTIFVGANNSGKTSATHAIELFLSGGKD--KFTVHD 58 Query: 60 FWFPPG---DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTD---GYHRIFYR 113 F+ + E + + F L + R Sbjct: 59 FYAGCWADFENFPAEGAIDAKVEFPAISLDAWISVDADNLYRVVELLPRAAWEGSLVGLR 118 Query: 114 LEGESAE--------------------------------------------DGSVMTLRS 129 +E + + Sbjct: 119 IEFAAKDAAQTLANFRAKATKVAKFAKTKEKDGQDYKPWPRNMRDYLSRELKNEYSLRYF 178 Query: 130 FLDKDGHPIDVEDINDQARH---------------LVRLMPVLRLRD-ARFMRRIRNGTV 173 LD+ + D + L+++ + R + + R + Sbjct: 179 ILDEAQLKEETADAAYTPKEIIGDAERSGHTVINSLIKVDFLSAQRHLSDGNAQARTEDL 238 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + T Q + LS+ Q+ + + + G + Sbjct: 239 SKRLSRVYTRNQKQREDDHNALRALALSEDQLTNHFAEVFSDTFKSLRKLGYPGLANPTL 298 Query: 234 RRRASNEQRSW----------------RYLDIINRMIDRPGGRSYRVILLGLFA-----T 272 RA+ + ++ + G +I +G+ Sbjct: 299 EIRAALKLERLMGDQQAKVHYLLEEATAEVEALALPDSYNGLGFKNLIYMGVELLDIHSA 358 Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL---------PLQRIATTN 323 + + L+ IE+PE +H + L L Q + TT+ Sbjct: 359 WSSTEEGEEDKRQPIHLIFIEEPEAHMHAQLQQAFVRKLTDLISPTGDDGYATQFVITTH 418 Query: 324 SGELLSLTPVEHVCRLVR---ESSRVAAWRLGPSGLSTE---DSRRISFHIRFNRPSSLF 377 S +L + + R ++ ++ S + D + +++ F Sbjct: 419 SPHILYERGFQPIRYFRRSPETGAKQSSAVFNLSVFYDQNEPDRDFLQRYMKLTHCDLFF 478 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLV 437 A +LVEG E V+ + Q A + ++E + K +G+ ++ Sbjct: 479 ADAAILVEGNVERLVLPLMITQGAKKLSAAYLSILEVGGAFAYRFRKLIEFLGLTTLIVT 538 Query: 438 DGDEAGKKYAAT 449 D D Sbjct: 539 DLDSVHPASPKK 550 >UniRef50_Q5JHA7 Predicted ATP-dependent endonuclease, OLD family n=1 Tax=Thermococcus kodakarensis RepID=Q5JHA7_PYRKO Length = 648 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 77/558 (13%), Positives = 188/558 (33%), Gaps = 62/558 (11%) Query: 2 ILERVEIVGFRGINRLSLM-----LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFE 56 L ++I +R I L L +E +IG+N GKS++L+A+ ++L + Sbjct: 5 KLIGLKIRNYRSIKELPLNDEYLMVENFVTIIGKNDAGKSNILNAIRIVL----EEDKVT 60 Query: 57 RDDFWFPPGDING--------REHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 +DDF + + I+ + + + + T Sbjct: 61 KDDFHKGTNENIEISLIFDATENTEIMHIINHDSNETAKGLGAFFSRYNNKSSTNTKIKI 120 Query: 109 RIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLV----RLMPVLRLRDARF 164 + + + ++ + T+ + D+D + ++ ++ + +RDA Sbjct: 121 KKIFEKDKLNSRNYKGDTIVEYFDEDKNKWVKIKDKKLINTILNDLPEVIYIPAIRDAIA 180 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAM---------VQL 215 ++G + + + + +Q + E + + S ++++ L + ++ Sbjct: 181 ETTQKSGFLMSKLLLPLLEKQNKSNSNEENGKEKQRSITELKKELQNLISRESKKLTKKI 240 Query: 216 LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDII---NRMIDRPGGRSYRVILLGLFAT 272 L+ + + + N + D + +++ G LL +F Sbjct: 241 LKELTVFNSSIEEIKIEPNKVQINFSPKIQIKDKYLPDSVPLEQRGAGLRSEFLLAMFRI 300 Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSL 330 + +LL E+PE LHP + L + Q + TT+S + Sbjct: 301 WAEV------GAGKGYILLFEEPELYLHPEAQKKMFSALKRISNEAQVLITTHSTIFVDR 354 Query: 331 TPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 + ++ + + RE+ + +E I I + + VEG+TE Sbjct: 355 SDLKSIWLIRRENGETKITTFEKPKVLSE----ILEEIGATPSDLFLSNGVIYVEGKTEI 410 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKP-----LVKFARRMGIEWHVLVDGDEAGKK 445 V +++A+ ++ I ++ ++ L + V++D D + Sbjct: 411 KVFSKIAKAICPKWEEYNISIVSLGGGNIRDLSETLLFNGLASLNPNGVVVIDSDGEQED 470 Query: 446 YA------ATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVF------HRMAQIP 493 + + + E + L ++E+++ F + Sbjct: 471 KKSGGCKPKPEKLKIKENFEQYGLTVHILQRREIENYIPLNILEKYFIEGYIKSKYITKI 530 Query: 494 ENVPMNLRKIISKAIHRS 511 + + + KI SK + Sbjct: 531 GDQQLKVNKIKSKEYFKK 548 >UniRef50_B8DW92 Predicted ATP-dependent endonuclease, OLD family protein n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DW92_BIFA0 Length = 515 Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 95/566 (16%), Positives = 183/566 (32%), Gaps = 70/566 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + I + + + ++ VL+G N GKSS+L L L+L + D Sbjct: 1 MRLTSLSIANHSRVTDFRIDVRRHLVLVGTNESGKSSILRCLDLVLGKSTA-------DL 53 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + RE L + + R E Sbjct: 54 YATVTAADIREPQLPFTI---------------------AVELENDGMHTCMRFEAALDA 92 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQAR-HLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 DG + + + DGH + D+ +L P R + + TV Sbjct: 93 DGETVHISRTMGDDGHVVTAADLARIGWVYLSDSFPSNRETQHEIVDELLE-TVQLEQEE 151 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 V D AR L S P L A+ + + + + + + Sbjct: 152 AVFEAVADQYARLLHSSP----------ALLALRKRIADALTSALPMRCNPNNLMFVPGS 201 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + D+ ++ R GL + A L + ++ +++PET L Sbjct: 202 KLNRNPFSDVHLQLRMHGKQRGLWEQSGGLRSIYTVALYDLL--DEHVHIVGVDEPETHL 259 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 HP LL Q+I T+S +++ + + + + LS + Sbjct: 260 HPTSQRNLARLLKEGASQKILATHSPDIIGEFEPDQIVVVRANGG---VVQPRRDFLSED 316 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 D + +R +R L A ++VEG T+ ++ A G + DA G+ ++E Sbjct: 317 DKLLLHMWVR-DRLEPLTAEHVIVVEGVTDRALVEHCANVTGRNLDAHGVVLLEAGGCRE 375 Query: 420 KP-LVKFA--RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDME-H 475 P + + LVD D G E E + + +D+E Sbjct: 376 MPAWQRVFGEHGFRVPLTQLVDEDAQGD----LAHQYHVRAGELESKLVFV-SHVDLEAE 430 Query: 476 FMYRQGFSDVFHRMAQIPENVPMNLRKI------------ISKAI--HRSSKPDLAIEVA 521 ++ G + ++Q P + + + R++K + V Sbjct: 431 YIRALGVDLAYEALSQSNLFRPAETKSLRTARQQGTLNESMLADFCRMRANKTRAVLAVL 490 Query: 522 MEAGRRGVDSVPTLLKKMFSRVLWLA 547 + + ++++ + V+ LA Sbjct: 491 PRISAKRARRI-DSVQRLLTSVIGLA 515 >UniRef50_UPI0001B4CEC2 SMC domain-containing protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CEC2 Length = 536 Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 83/563 (14%), Positives = 167/563 (29%), Gaps = 49/563 (8%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD-- 58 +L ++ I +R L + N+L+G+N GKS++L+A+ L L+ + +D Sbjct: 1 MLSKIVIHNYRTFREFELDFDPEMNILVGDNDAGKSTILEAIELGLTGKLRGRPLYQDLS 60 Query: 59 --DFWFPPGDI---------NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 F + I L F +S P +R L P Sbjct: 61 PYLFHQDAVSEWIADLREGRAVPPPEIIIDL-FLDSTPEAATLRGNNNLLKADEPGVRIR 119 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA--RFM 165 + E E E + + + +D + + L DA + Sbjct: 120 VALNPDYEAEYKEFIKKPDEVRLIPTEYYKVDWLAFDGNGVTFRSIPASASLIDAANIHL 179 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 + + + ++ + + A + L R S + + + ++V++ Sbjct: 180 QSGVDYYMKHIIDSRLKADERVKLTRAYRSLRETFAQDE------SIVKINGDLRGTSND 233 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 R + S + + + L + L D Sbjct: 234 VSDRELTLNIDVSQKSSWESGIVPHLDDLPFQFVGKGEQSTLKILLAL-------NKKVD 286 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVRES 343 ++L+E+PE L L ++ Q TT+S +L+ ++ + L Sbjct: 287 DAHIVLVEEPENHLSFPNLGKLVKKISKKCEDQQVFITTHSSFVLNKLGLDKLVLLSPGG 346 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE--LARQCG 401 L T ++ + A+ +LVEG ++ V+ + G Sbjct: 347 G------FRIDRLPTSTQEYFKKLSGYDTLRLVLAKRSILVEGPSDELVVQRAYMDTHDG 400 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRM-GIEWHVLVDGDEAGKKYAATVRSLLNNDREA 460 GI VI K + A + G V+ D D + + Sbjct: 401 TLPAENGIDVINVRGLSFKRFLDIAMLLPGNRVAVITDNDGKEARDVRQRYANYTASANI 460 Query: 461 EREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 ME +++ + + +L + K K D A+ + Sbjct: 461 TVHVGKDANFKTMEPQLFKANGRVTMNAVLGQNFTTDQDLLDHMKK-----HKTDCALAI 515 Query: 521 AMEAGRRGVDSVPTLLKKMFSRV 543 +P +K+ V Sbjct: 516 FESDQLIN---MPEYIKEAVDAV 535 >UniRef50_A3Y2D0 Predicted ATP-dependent endonuclease, OLD family protein n=3 Tax=Bacteria RepID=A3Y2D0_9VIBR Length = 651 Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 85/627 (13%), Positives = 184/627 (29%), Gaps = 104/627 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLL----SPESDLYHFE 56 M +E + + FR +++L+ + +G N GKS++++AL + ++DL Sbjct: 1 MKIESIRVKNFRSFKDETILLDDYSCFVGSNGAGKSTVMNALNVFFRQFRDSKTDLSKLS 60 Query: 57 RDDFWFPPGDINGREHHLHIILTF-RESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE 115 ++DF + + I +TF S + + Y Y R + Sbjct: 61 KEDFHHKNT-----QLPIEITVTFNSLSAEAKSDLADYVRQGKLIVTAKAEYDPATERAD 115 Query: 116 GESAEDGSVMT-LRSFLDKDGHPIDVEDINDQARHLVRLMP------------------- 155 + + V++ ++ D + V ++ ++L Sbjct: 116 VKQYGNRMVISGFSAWFDANKQKAKVPELKAIYQNLKNTFSGLADVKTKGDMEVALHDYE 175 Query: 156 ---------VLRLRDARFMRRIRNGTVPNVPNVEVTA-------------RQLDFLAREL 193 V + N P + V V+A LD L + Sbjct: 176 AKNPQLCTLVPSEDQFYGASKGANKIAPYLEWVFVSASKDFSEEAEQTKGSALDQLLNRV 235 Query: 194 SSHPQNLSDG----------QIRQGLSAMVQLLEHYFSEQGAGQARYRLM----RRRASN 239 D ++ L L+ G ++ + + Sbjct: 236 LGTKVTFKDKVSQLKEEYRISYKKMLEEEQPALQEISDSLGIKLKKWSNPDASAQIVWNE 295 Query: 240 EQRSWRYLDIINRMIDRPGGR-------SYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 + ++ ++ + ++LQ K ++ + Sbjct: 296 DPEKSVKIEEPKALVVISEKGFEGELSRFGHGMQRSYLLSVLQELSDANTAKSPTLVIAV 355 Query: 293 EDPETRLHPIMLSVAWHLLNLL-PLQRIATTNSGELLSLTPVEHVCRLVRES--SRVAAW 349 E+PE HP LL L Q + T+S + + E + + E Sbjct: 356 EEPELYQHPPQARYLAQLLQELDDSQVMVCTHSPYFIPVERFEDLRVVREEGVPCESKVK 415 Query: 350 RLGPSGLSTE-------------DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 + LS ++ +++ F + +LVEG + I Sbjct: 416 SVTYKKLSDTLHGSGQVLLRETGMLAKLYPNLKPEINEMFFCKKLILVEGIEDVAYIRTY 475 Query: 397 ARQCGH--HFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 G F G +I L + + +GI+ +V+ D D T +++ Sbjct: 476 IELMGKTDEFRLGGFHIIPVGGKSELLKPIALTKHLGIDVYVVCDAD--------TNKTV 527 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSK 513 + ++++ + L L + ++ + F + N+ + I K Sbjct: 528 EGEVVKHKKDNASILHLLGHDKALHWSEETHRFSNLTMWTHNITVT----IGPEFGPKWK 583 Query: 514 PDLAIEVAMEAGRRGVDSVPTLLKKMF 540 A +G+ P + K Sbjct: 584 GFEDKAAAHYGNAKGLKKNPLAVSKAL 610 >UniRef50_B2VB80 Predicted ATP-dependent endonuclease of the OLD family n=4 Tax=Gammaproteobacteria RepID=B2VB80_ERWT9 Length = 608 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 90/587 (15%), Positives = 184/587 (31%), Gaps = 94/587 (16%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L+++++ FRG + + +++ ++G N +GKS++L+AL + + + D Sbjct: 1 MRLKKIKLTNFRGYRNTIEIPVDEAMTGIVGRNDFGKSTILEALAIFFEIDG----IKAD 56 Query: 59 DFWFPPGDINGREHHLHIILTFRESLP-------------GRHRVRRYRPLE-----ACW 100 + + H I F + P H + + E Sbjct: 57 KNDMNCFSMANGDTHFEISCEFDDLPPVILIDERVSTTLASEHLLNSHECFEIVKTFKAT 116 Query: 101 TPCTDGYHRIFYR------------------------LEGESAEDGSVMTLRSFLDKDGH 136 T I + +E + + + R + Sbjct: 117 TTGKPDKTYIRCQHPVNEPLNNLLGMKISELKAIGKDVEQKVEDKRTASLWRQAIRDAAM 176 Query: 137 PIDVEDI------------NDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTAR 184 P + +I ++ +P L A + N P + Sbjct: 177 PYECAEILLDVDKGLGTETKSIWGRILEQLPTFALFKADRESSDGDSEAKN-PLQQAVKD 235 Query: 185 QLDFLARELSSHPQNLSDGQIR---QGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 L ++S+ Q + D + + L + ++ +E + + Sbjct: 236 AQAALQGKISALEQEIQDSVLDVAGRTLDKLREMAPELANELTPRFKEKPKWTFNFTLD- 294 Query: 242 RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHP 301 I++ G R+ILL F + + IE+PET HP Sbjct: 295 ------GENGIPINKRGSGVRRLILLNFFRAEAE---KAVSGTPRNVIYAIEEPETSQHP 345 Query: 302 IMLSVAWHLL----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 + L N Q I TT+ L L PVE + + ++ ++ + + Sbjct: 346 NYQIMLMKALLLLSNKPNRQIIVTTHVPALAGLIPVEGIRYVTKDEDGQPVVKMPDNAVL 405 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE---LARQCG---HHFDAEGIKV 411 E + + A+ +LVEG+++ + ++ G + + I Sbjct: 406 REATESLGVLPETGMER---AKGIVLVEGKSDVTFLRHAGICLKKSGDIPVNLEDVNIVP 462 Query: 412 IEFAQSGLKPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTAL 468 I G A +G+ W V +D D G + E + + Sbjct: 463 ILIGGCGSVKHWVTLNLANDLGLPWCVFLDSDIGGDPAQVLSIEKRKKEVEEAGKMFFST 522 Query: 469 PALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPD 515 ++E+++ D Q+ + +KII KA ++KP+ Sbjct: 523 RKREVENYLCPDLIRD--ETGVQVVFTDTCDAKKIIGKA--TNTKPN 565 >UniRef50_Q935U7 Putative ATP/GTP-binding protein n=1 Tax=Streptococcus thermophilus RepID=Q935U7_STRTR Length = 573 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 85/581 (14%), Positives = 203/581 (34%), Gaps = 45/581 (7%) Query: 2 ILERVEIVGFRGINRLSLML---EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 L+ ++I ++ I + + N+L+G+N GKS+LL ++ LL+S + + Sbjct: 3 YLKSLKIKNYKHIGDSYVGFEKIDNFNILVGQNNIGKSTLLQSIELLISGNDSNRYITEN 62 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 + I L FR+++ G H + + Y ++ GE+ Sbjct: 63 ----TKVRFSFCPEEDDIKLVFRDNMYGGHISGNHWDFGKKYIDKCMSYDFQPWKTIGET 118 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQAR---HLVRLMPVLRLRDARFMRRIRNGTVPN 175 S ++ +F + + + + R + ++ + +++L R + Sbjct: 119 QMVLSDISSITFEELNRNKTIEAFTDLANRFKSNKLKRLKIIKLSADRNLIPEVQNGKKT 178 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 V A L ++S P + +G I L A+ ++++ + Sbjct: 179 VSEDGAGATNLLRQYLNVASLPNEIVEGDI---LEALNEIMKPENNFTRIMCQEIETTDT 235 Query: 236 RAS-NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 S E I G ++ ++L+ LF + + + E+ Sbjct: 236 SNSMWEILLVNENGKIPISSSGSGLKTVLLVLIKLFLETREYTNNNFELSICNSIFIFEE 295 Query: 295 PETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRL--VRESSRVAA 348 E LHP + + L Q TT+S +++ + L +++ + Sbjct: 296 LENNLHPTIQRNLFEFLYQWAIKYNTQMFLTTHSTIPINMFSGKENVTLTHIKKENGTIV 355 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 S LS ++ I ++ L + + VEG ++ IN + E Sbjct: 356 TN---SALSFIENEGILMNLGVRASDILQSNAVIWVEGPSDRIYINRWIELYSNGSLKEN 412 Query: 409 I--KVIEFAQSGLKP----------LVKFARRMGIEWHVLVDGDEAGKKYAA-TVRSLLN 455 + +++ + L L++ R I +++D D+ G + + Sbjct: 413 VHYQILFYGGRLLSHLTGEVNELNELIQLFRA-NIHSIIVIDSDKTGPGKRINKTKQRIK 471 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFH------RMAQIPENVPMNLRKIISKAIH 509 + + ++E+++ + F V+ + +I + + N R+ + + Sbjct: 472 GEFNKNNAIVWITEGKEIENYLSKNIFKKVYKVDKQIGKFEKIDDFLNENSRRKNQGSYY 531 Query: 510 RSSKPDLAIEVAMEAGRRGVD--SVPTLLKKMFSRVLWLAR 548 +K +I +A E ++ + + + S++ Sbjct: 532 VKNKVSESIVIAKEMDLEDIEILDLEKQISNIVSKIKLWNG 572 >UniRef50_C0E1U9 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E1U9_9CORY Length = 538 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 85/568 (14%), Positives = 175/568 (30%), Gaps = 63/568 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTL-------------LL 46 M++ ++ I G+R + N+++G N GKS+LL+A++L +L Sbjct: 1 MMITKIHIQGYRKLKEFLFEPNNGMNIIVGGNDAGKSTLLEAISLCLTGRINGQRASDVL 60 Query: 47 SPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGR--------HRVRRYRPLEA 98 +P + F + + I L E G + R + Sbjct: 61 NPYWFNTELVAEFFAARKNNQTVPPPEIRIELHL-EVSKGELENMRGVNNMKREDAAGLS 119 Query: 99 CWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 W Y + + +L + + N V ++ Sbjct: 120 MWIHPDPEYLEELDEYFSQVDCPPIIPIE-YYLVEWKNFAGTIIFNRPKGLGVAVINSRT 178 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 +R R M + + + + ++ R+L ++ + I L + E Sbjct: 179 IRSDRGMDFYTKQLLESKLDPKD-RNKVSVKHRQLRNNLGSELIEDINTSLHENLSPSES 237 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 G + R ++ R G + +A Sbjct: 238 GRWLVGLQIDQSRSTSWESTLIPEIDRI------PFSMSGQG---------AQVIAKASL 282 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLN--LLPLQRIATTNSGELLSLTPVEHV 336 L +D+ LLIE+PE L L ++ + Q TT+S +L+ + + Sbjct: 283 ALSQSEDSTSFLLIEEPENHLTHTRLRELLSIIERNSMGRQVFITTHSSYVLNRLGLNQL 342 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 L S + SGLS E + F+ + A ++VEG ++ + N Sbjct: 343 VLLHGGSHKS------FSGLSKETTEYFQLISGFDTLRLVLADKMVIVEGPSDEIIFNHF 396 Query: 397 AR-QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455 + + G A GI V+ + + A + + L D D ++ Sbjct: 397 FKDKYGREPMAFGIDVMSIRGTSFLRSFELASLLDRQLIALRDNDGQEPEHWIKRLEPFL 456 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPD 515 + + + +E + + + + L+K + +K Sbjct: 457 LEGKRQMFIGNPEDGRTLEPQILTAN-----PHLCETNGDYEKKLKK------MQDNKTA 505 Query: 516 LAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 A+ +A + P K+ + + Sbjct: 506 TALNIAQSDEKLTP---PPYFKEAIAAL 530 >UniRef50_C2FX67 SMC domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FX67_9SPHI Length = 656 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 80/490 (16%), Positives = 169/490 (34%), Gaps = 46/490 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFE--R 57 M L +++ ++GI + + N++IGEN GKS+++DA+ LL + + Sbjct: 15 MYLAYIKVENYKGIEAIETEFDPKLNIIIGENGCGKSAIIDAIRLLYNIGEPIREISVSS 74 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DDF + +G + L + + + + ++ Sbjct: 75 DDFHQKTVENDGIKTIQKSSLITITYIFKGLSTAQKGAFYEYMVIDPNKIEEDYAKVSIS 134 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA-RFMRRIRNGTVPNV 176 E S+ + ID + + + L + + LRD+ + + RN + V Sbjct: 135 YEEKDGKYPNFSY---NTGNIDGQKADYKTFELFQHYYLGALRDSTKDLLSTRNNILGKV 191 Query: 177 PNVEVTARQLDFLARELSS--HPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 V + + ++ + Q LS +++ + LE F + + R+ Sbjct: 192 IRRFVKREKSESEIEQIIKDANSQLLSRDEVKNTRDGVNTNLESIFKKVIDNKIGVRIEE 251 Query: 235 RRASNEQRSWR--------YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 + + + L + + +I + + K + + Sbjct: 252 AKTEYIVNAIKPYLPHDRSTLKDEGFHLWQNSLGLNNLIYIAVVLG--DIKEQIEDNGLP 309 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVEHVCRL--- 339 LLIE+PE+ LHP + ++ LN Q TT+S L S P++++ L Sbjct: 310 HFALLIEEPESHLHPQLQLSLYNFLNNANATENSQLFITTHSPTLTSKVPLKNLILLDCG 369 Query: 340 ----------VRESSRVAAWRLGPSGLSTEDSR----RISFHIRFNRPSSLFARCWLLVE 385 RES ++ L D ++ +I + LFA+ L +E Sbjct: 370 KATKLDKQFQNRESEKLIEDTTKNKELLDPDLENRMKKLQRYIDVTKSQLLFAKSILFIE 429 Query: 386 GETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFAR------RMGIEWHVLVDG 439 G +E +I+ + + +++ + P + R+ ++ D Sbjct: 430 GISEELLISAFTLLEDYKLEDYRTEIVNVKGTSFYPFLYLFNNSNLLERINKPISIITDD 489 Query: 440 DEAGKKYAAT 449 D + Sbjct: 490 DRFTDSKKSE 499 >UniRef50_C7PFH0 ATP-dependent endonuclease, OLD family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFH0_CHIPD Length = 780 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 75/535 (14%), Positives = 155/535 (28%), Gaps = 94/535 (17%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + I +R + + + + + + +G N GK+S LS ++D F D Sbjct: 1 MYLKTICIKNYRRLKDVKINIQKDTTIFVGANNSGKTSATHIFQSFLSGKAD---FSLHD 57 Query: 60 FWFPPGDING-------------REHHLHIILTFRESLPG-------------------- 86 F + + + + L F S Sbjct: 58 FSVDCWKLIKDISQSTNIVEDIYKLPTISLDLWFEVSEDDLNYIIDLLPNLDWASQPVGI 117 Query: 87 ---------RHRVRRYRPLEACWTPCTDG---------YHRIFYRLEGESAEDGSVM--- 125 + + Y+ +A + RL E + V+ Sbjct: 118 RLMYAPKGHDNLLLEYQTAKADAQKKGKDMFQPWPKDLSDYLTKRLNQEYEINYFVLDAT 177 Query: 126 ---TLRSFLDKDGHPIDVEDINDQ-------ARHLVRLMPVLRLRD-ARFMRRIRNGTVP 174 + +D P + + D R L+++ + R + + R+ + Sbjct: 178 QFDRNYNIIDPSYTPHALHEDKDNKKTGAAIIRSLIKVDFLNAQRHLSDNISTGRSEDLS 237 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 N S+ + Q L + Q ++ G + Sbjct: 238 KRFNRFYDRNLEKRENDPEIYKALFDSESLLTQHLEKVFQPTLDSLNKLGYPGFTNPKLV 297 Query: 235 RRASNEQRSW-------RYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 +A+ Q S + ++ G +I + + + D A Sbjct: 298 IKAAYSQESVSQYAQLHYSIGDLDLPDKYNGLGFKNLIYMVIEILDFHERWKEDTDTKAP 357 Query: 288 -PLLLIEDPETRLHPIMLSVAWHLLNLL----------PLQRIATTNSGELLSLTPVEHV 336 L+LIE+PE LH + V + + Q I +T+S ++ + + Sbjct: 358 LHLILIEEPEAHLHAQLQQVFIRQILNIINPSGQNDGFNTQLIVSTHSPHIIYESGFLPI 417 Query: 337 CRLVRESSRVAAWRLGPSGL-------STEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 R S + L + + +++ FA +LVEG E Sbjct: 418 RYFRRTSEVSKSPVSEVLNLSTFYNESEKDSREFLEKYMKLTHCDLFFADAAILVEGNVE 477 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 ++ + +C + + VIE + + +G+ V+ D D Sbjct: 478 RLLLPLMIEKCQKSLQSNYLSVIEVGGAFAYRFEQLISFLGLTTLVITDLDSVFP 532 >UniRef50_Q19NH8 ATP/GTP-binding protein n=6 Tax=Enterobacteriaceae RepID=Q19NH8_ECOK1 Length = 608 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 91/582 (15%), Positives = 178/582 (30%), Gaps = 84/582 (14%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDL------ 52 M L ++++ FRG +++++ ++G N +GKS+LL+AL + E Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKNDM 60 Query: 53 --YHFERDDFWFPP-----------------------GDINGREHHLHIILTFRESLPGR 87 + D F + + + I+ TF+ + G+ Sbjct: 61 NCFSLREGDGRFEIACEFDDLPDFIMIDDRVQTTLASEHLLNEDGNFEIVKTFKATTSGK 120 Query: 88 HRVRRYRPL-------EACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDV 140 R + + +E A+ + R + + P Sbjct: 121 PEQTCIRCIHPDEEPLRNLLGMKISELKAVGKEVEKNVADKRTASLWRQAIREAAAPYTC 180 Query: 141 EDI------------NDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN--VEVTARQL 186 +I ++ L+P + A + N V+ L Sbjct: 181 SEIMLDVDKEFGTDTKSLWGKILDLLPTYAIFKADRESSDGDSEAKNPLQQAVKDAQAAL 240 Query: 187 DFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRY 246 L + Q+ ++ L + ++ SE + + Sbjct: 241 QDKITALENEIQDSVLDVAQRTLDKLREMAPELASELTPRFKEKPKWTFNFTLD------ 294 Query: 247 LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSV 306 I++ G R+ILL F + + IE+PET HP + Sbjct: 295 -GENGIPINKRGSGIRRLILLNFFRAEAE---KNVAGTPRNVIYAIEEPETSQHPNYQMM 350 Query: 307 AWHLLNLLPLQ----RIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSR 362 L L Q I TT+ L L PVE V + R + ++ + E + Sbjct: 351 LMKALLALAGQPHRQIIVTTHVPALAGLIPVEGVRYVTRNEAGEPVVKMPDDAVLKEATE 410 Query: 363 RISFHIRFNRPSSLFARCWLLVEGETETWVINELAR------QCGHHFDAEGIKVIEFAQ 416 + A+ +LVEG+++ + A + I + Sbjct: 411 SLGVLPETGMER---AQGIVLVEGKSDVTFLRHAASSLKQSGALPASLEDVKIVPVLIGG 467 Query: 417 SGLKPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 G A+ +G+ W V +D D G + E + A ++ Sbjct: 468 CGSVKHWVTLNLAKDLGLPWCVFLDSDIGGDPAQVLSIQKRKKEVEEAGKVFFATRKREI 527 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPD 515 E+++ ++ + + +KII +A+ KPD Sbjct: 528 ENYLCPDLIEEI--TGVAVTFTDTCDAKKIIGRAV--GMKPD 565 >UniRef50_Q3B1R7 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B1R7_PELLD Length = 595 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 88/473 (18%), Positives = 148/473 (31%), Gaps = 38/473 (8%) Query: 1 MI-LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L R+ I FR ++ L +G N GKS+LL A+ ++P + E D Sbjct: 1 MYTLSRISISNFRSCQQVDFALAAFTPFVGYNNAGKSNLLAAIRWFIAPFA----LEAAD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + I + + L +HR R L G R L A Sbjct: 57 FNQLSLPVVVEGEINGITASLLDRLDVKHRSRIEPLLM------DGGLLRFRRELSSPGA 110 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 +V+++ + D + A L L P + A + V + + Sbjct: 111 ASTAVLSIWNVSAGDSGEWVINPTG-IAAALKALFPEPVVIGAMEDAAEDSSKVKSSNTI 169 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGL---------------SAMVQLLEHYFSEQG 224 + + S +R +L YF Sbjct: 170 GKLLAEFSVALEDAHSGQLATVLADLRSSFNANGGSRSVTLQRFDEEATSVLRDYFPGVA 229 Query: 225 AGQARY-RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL--R 281 M R G + R I + + L + + Sbjct: 230 LHLEIPVPEMGALLKGATVKVSEAGGEARDFSCLGHGAQRSIQMSMIQYLAEVRERAVGS 289 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEHVCR 338 + + LL+I++PE LHP + L L Q + TT+S ++ V + Sbjct: 290 GSEPGQRLLIIDEPELFLHPQAIEQVREALKRLSRNGCQVLFTTHSPLMIDRESVPNTRL 349 Query: 339 LVRESSRVAAWRLGP--SGLSTEDSRRISFHIRFNRP-SSLFARCWLLVEGETETWVINE 395 + + SS A L +D R+ + LFA LLVEG TET V+ Sbjct: 350 VRKGSSTTVASTLETVLQRYVNDDGSRLQTLLDLKNAKEWLFADRALLVEGITETRVLPV 409 Query: 396 LARQC-GHHFDAEGIKVIEF-AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKY 446 L + G + + +++ + + + MG+ + D D K Sbjct: 410 LVQAVTGKSLGSRSVALVQVDGGAAVSDCMNVLGAMGMTCFAIADLDYVLDKA 462 >UniRef50_B8FVQ2 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Clostridiales RepID=B8FVQ2_DESHD Length = 564 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 79/555 (14%), Positives = 175/555 (31%), Gaps = 54/555 (9%) Query: 1 MILERVEIVGFRGINRLSLM--LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L + I F I+ + + ++ VLIG N GK+++L A L + Sbjct: 1 MRLCELLIKNFYCIDSVGIRVKIDNIIVLIGPNNVGKTTVLKAYELFTKSGEPQ---PIE 57 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 F+ N E+ + I F + + + L ++ I Y+ Sbjct: 58 SFYQ-----NKEENAIEITGIFSDISDEDKKQIGEKWLY----TDSEYGDVIKYKWRWNK 108 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 + + + +K + + + + + D + + Sbjct: 109 VNEKAKKQSWNEAEKKWESGGMGGWDSKIASCLPTPLKINPFDDAASLEKQIVDILTTAV 168 Query: 179 VEVTARQLDFLARELSSHP--QNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 E L+ + N +I + LS L+ + + + Sbjct: 169 KESIKSDNSKLSGMIDQMNTLANEVKSEINEELSKTTSKLQDNIGDIFPEHKIDLMPQAG 228 Query: 237 ASNEQRSWRYLDIIN--------RMIDRPGGRSYRVILLGLFATLLQ----AKGTLRLDK 284 + + I + G R L L G L Sbjct: 229 KIDVDKILASGTHIRVADSLGTFYPLINQGSGLQRAFLWSAIEALADTGNYKSGKKVLSS 288 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVE-HVCRL 339 + +LL+E+PE+ LHP + A L + Q + TT+S + ++ + R+ Sbjct: 289 NEPRILLVEEPESFLHPPAIRAAREALYKIADLENWQVMITTHSPIFIDVSKPHTTIVRV 348 Query: 340 VRE-SSRVAAWRLGPSGLSTEDSRRIS--FHIRFNRPSSLFARCWLLVEGETETWVINEL 396 ++ S + + ++ R+ + F+ +LVEG+TE ++EL Sbjct: 349 EKQCDSSTKIFSTDKADFDEDERERLQMIRNCHPTINEFFFSDKIILVEGDTEQSTLSEL 408 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAAT------ 449 I ++ P K G+ + V+ D D K Sbjct: 409 K-------GNTDITIVNCRGKANIPMFQKILNHFGLSYTVVHDLDSPRVKRKEKWITNAM 461 Query: 450 --VRSLLNNDREAEREHLTALPALDMEHFMYR--QGFSDVFHRMAQIPENVPMNLRKIIS 505 + + + ++ + +L + D E + Q ++ + ++ + +R ++ Sbjct: 462 WSINNKIVDEANKKDGNLVIVNVPDFEGQFFGYLQKGDKPYNAVKELAKQEKEEVRAELN 521 Query: 506 KAIHRSSKPDLAIEV 520 + + + D + + Sbjct: 522 EILTNTLAGDFSRII 536 >UniRef50_A8SQN9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SQN9_9FIRM Length = 559 Score = 182 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 71/578 (12%), Positives = 164/578 (28%), Gaps = 47/578 (8%) Query: 1 MILERVEIVGFRGI---NRLSLM-LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFE 56 M + + G++ L L + +V+IG+N GKSS++D + ++ + Sbjct: 1 MY-KGIRFKGYKAFAADTYTELDNLPRVSVIIGKNNSGKSSVIDVMGMMYDRMYAMR--- 56 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 E I +T + + I YR+E Sbjct: 57 ------EEITSCAEEIAAEIPITRDMCDRLLSGYTSIQGYTSGTLWIKSKGRSIGYRVEP 110 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV 176 E G ++ L +D +R + + + + Sbjct: 111 E-DSGGHIVEWNDRLPLWNSSDANRVESDISRERDTYVFRHVAAERNIVPEEEEKIGGTL 169 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 ++ T R + R + L A+ +++ + ++ + Sbjct: 170 EDLSSTGRGASNIIRAFLNDSSYDETIIEDTLLKAVNEIM----GPEAVFESIRVQQVQD 225 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 R +L + + L L L K+ + + E+ E Sbjct: 226 GYGNVRWEVFLKEEGMSRCPLSRMGSGLKTIILVLLNLLVIPELDEYKNKKMVYGFEELE 285 Query: 297 TRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEH---VCRLVRESSRVAAW 349 LHP M + + +Q TT+S ++ + + + ++ R Sbjct: 286 NNLHPAMQRKLFEYIYEFAEMHDVQVFITTHSHVAINAFYDKDDAGIFHVYKQDGRAFVK 345 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGI 409 R+ D RI + L + + VEG ++ I EG+ Sbjct: 346 RIESY----LDKTRILDDLDVKASDLLQSNGIIWVEGPSDRVYIKHWLDLYFPDRFVEGV 401 Query: 410 --KVIEFAQSGLKPL--------VKFARRMGIEWHVLVDGDEAGKKYAAT-VRSLLNNDR 458 + + + L + + +++D D+ + + + + Sbjct: 402 HYQFLYYGGRLLSQYSAEEVTELISVIKT-NRNAVIVMDSDKRNRNAQLNDTKKRIIAEF 460 Query: 459 EAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIH--RSSKPDL 516 +A ++E+++ + + + I K K Sbjct: 461 DALGMMSWVTKGKEIENYIPKTAIEEALEVSLKAQCGQYELFPGYIEKYYRGFTGKKVRF 520 Query: 517 AIEVAMEAGRRGVDSVPTLLKKMFS---RVLWLARGRA 551 A V + + + K++ R+ G++ Sbjct: 521 ARCVVDHMTEENMAGMMDVKKRVTELGGRIAEWNGGQS 558 >UniRef50_Q2BBA4 Predicted ATP-dependent endonuclease of the OLD family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBA4_9BACI Length = 603 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 84/563 (14%), Positives = 173/563 (30%), Gaps = 38/563 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L ++ I F+GI L+L +E +++IG N KS++L+AL S E++ + Sbjct: 1 MKLTKLTIRNFKGIKELALDVENISIIIGPNNCSKSTVLEALCKF---GSSDTMLEKNLY 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 H LT E R + P R S Sbjct: 58 HRHNTSNPVSFHATFSDLTDEEINLHGIRASLHEPTGKFIVRAVYRLGEKVERASKLSGN 117 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPV----LRLRDARFMRRIRNGTVPNV 176 + + + K G + ++ + V ++D+ + +V Sbjct: 118 EEHDLGNEGWNGKMGGGKNGTHFLSAFPEVIYIPAVKNANDDIKDSSPYMKTLYALYKDV 177 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 ++ + L + + +I+ + L+ S + Sbjct: 178 IRGLDEYKEAKEKTQLLQDKINSHDNEKIKYFEEEVQGFLKEVTSTTIRFSVDVNPLDEI 237 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP---LLLIE 293 S + + + M+ G R +L + + + ++ IE Sbjct: 238 VSTSLKPNFDFNGLETMLAHQGNGVQRTFMLSILKGFKMYMKKYQGEDKGVNRPLIIAIE 297 Query: 294 DPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVE----HVCRLVRESSR 345 +PE LHP + V L L Q +AT++S + L+ + ++ Sbjct: 298 EPELYLHPHLARVFKETLYSLADEGFFQVLATSHSPNFIDLSKPHRTLAKLSLNEDKNVI 357 Query: 346 VAAWRLGPSGLSTEDSRRISFHIRFNR--PSSLFARCWLLVEGETETWVINELARQC--- 400 V+ GL + + + +RFN FA+ +LVEG+TE + + + Sbjct: 358 VSQVNSDIYGLPSHEKDKFQALLRFNPYVNEIFFAKNVILVEGDTEVVALKLIGEKLVSS 417 Query: 401 -GHHFDAEG-IKVIEFAQSGLKPLV-KFARRMGIEWHVLVDGDEAGKKYAATVRSL---- 453 + V+ A G +V GI++ + D D ++++ Sbjct: 418 GDLDSEIYNRTSVVNCAGKGTMYVVLNVLNNFGIQYTCIHDFDMTEHNKKGEIKTVAALK 477 Query: 454 -------LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISK 506 + + + E M A ++ + Sbjct: 478 KVLTLNHKIERLCNVKGNKKFVFQYTFEEEMPPDYEKGSSKSFAAYEYLQGKETIEMPLR 537 Query: 507 AIHRSSKPDLAIEVAMEAGRRGV 529 ++ K I++ E + Sbjct: 538 LLNI-VKSAYGIQLQQELDHKNS 559 >UniRef50_C9M1X4 Putative uncharacterized protein n=1 Tax=Lactobacillus helveticus DSM 20075 RepID=C9M1X4_LACHE Length = 689 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 86/533 (16%), Positives = 166/533 (31%), Gaps = 66/533 (12%) Query: 2 ILERVEIVGFRGINRLSLM--LEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 + VEI FR ++ E N+L+G N GK++++ A+ L+ + + +D Sbjct: 7 FISSVEITNFRTFKEKQIIRFTEGINILVGPNNIGKTTIISAIRLIFDKNK--FGLDIND 64 Query: 60 FWFPPGDINGREHHLHIILTF------RESLPGRHRVRRYRPLEACWTP----------C 103 F + I ++ +E + L P Sbjct: 65 FSKTETKEELKNCSPKITVSVNLQKSNKEGSDSDDLLAIRNWLTDIDNPYKAKITMQFQL 124 Query: 104 TDGYHRIFYRLEGESAEDGSV--MTLRSFLDKDGHPIDVEDI--NDQARHLVRLM--PVL 157 Y + + + + GSV FL K V + L R + Sbjct: 125 PTKYEKAYLDAVKDLDDIGSVWLELEDEFLPKYQRKYFVGESAQPLMDNSLSRFNCQYLP 184 Query: 158 RLRDARFMRRIRNGTV-----------PNVPNVEVTARQLDFLARELSSHPQNLS---DG 203 +RDA N + N E+ ++ ++ +L+ Sbjct: 185 AIRDAEKRMNSGNKYLLNKLLNFFIDYDLKSNEELKKSDIEKKMQKRHKDFHDLAVKLLN 244 Query: 204 QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYL------DIINRMIDRP 257 + + + Y S+ GA A N+ + N I+ Sbjct: 245 NLSPRFKEGKKEMLKYSSQTGATFDGEEPEFNSALNDHDILKEFSLVVKNGESNVPINLN 304 Query: 258 GGRSYRVILLGLFATLLQAKGTLRL---DKDARPLLLIEDPETRLHPIMLSVAWHLLN-- 312 G +I + L LQ + P LLIE+PE LHP M L Sbjct: 305 GLGYNNLIYISLVLAELQQSRDNSYFGDNSSVFPFLLIEEPEAHLHPDMQYDFLKFLQNN 364 Query: 313 -------LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLST-EDSRRI 364 Q I TT+S + + ++ + L + S V G + + +D + + Sbjct: 365 IKDGTTSETAKQVIITTHSPNITAAASLDDLIVLSKYKSGVKIGYPGETFIDNPKDKKFV 424 Query: 365 SFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK 424 + R + F + +EG E +I + + + I +I + P ++ Sbjct: 425 ERFLDVTRSNLFFTNQLIFIEGLAEQMLIPQFMKADTSNIQNRHISIINLSGRYFIPFLR 484 Query: 425 FAR-------RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPA 470 + + L D D K + + + + + ++ ++ A Sbjct: 485 MFDTNKNPNTAIYKQIACLTDLDPVQGKQNKSCPPIFQAEPDNKNPNIESIKA 537 >UniRef50_A4AD51 Predicted ATP-dependent endonuclease, OLD family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AD51_9GAMM Length = 617 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 154/449 (34%), Gaps = 36/449 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + ++I +R I L+ L+ +L G N GKS++L A+TL S S Sbjct: 1 MRITNLKIKNYRSIESLNTRLDSLTMLCGPNGSGKSNILKAITLAFSDISLDKRVVGQFV 60 Query: 61 WFPPGDI-NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + L F ++ P+ I Y+ + + Sbjct: 61 RDNITKSKLNSSASIQVELWFSDA-----------PISVLAIAQETKVKPIVYKFKLTKS 109 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + + R LD ++ + ++ + +RD + Sbjct: 110 GNVTRKLGRIELD--------DESFKKLSEKFSIVYIPTIRDLE--NDGLRPFLELFKKT 159 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR-LMRRRAS 238 TAR L R L+ LS L ++++ + + + + Sbjct: 160 IQTARGGRELTRHLTDIKTTLSKKAAL-ILGEQKAVVQNILNARAIELSTAEIELDDLYD 218 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 N + + ++ G +++ L+ + + L E+P+ Sbjct: 219 NLKLQIKDSSRNTLPMEYLGTGHQSAVIINLY-------KQFGENSPGQTTYLFEEPDAH 271 Query: 299 LHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVRESS-RVAAWRLGPSG 355 LHP + L+ + + Q + +T+S LLS +E L +++ SG Sbjct: 272 LHPPTIRAIGSQLDQISISSQVVVSTHSPILLSQLGLEKALHLKIDNNTGTKVADSNLSG 331 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIEF 414 LS +LF++ ++VEG T+ V+ L + G D + ++ Sbjct: 332 LSQTQLNHRLLKYGLRVTEALFSKLVVIVEGGTDAIVVGRLIEIRSGKSSDQMDLLLVPA 391 Query: 415 AQS-GLKPLVKFARRMGIEWHVLVDGDEA 442 + + + +++G++W + D D A Sbjct: 392 TGKENIVDIAEILQKLGVKWIAIFDFDAA 420 >UniRef50_A9G4V7 Putative old protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G4V7_SORC5 Length = 824 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 87/579 (15%), Positives = 168/579 (29%), Gaps = 104/579 (17%) Query: 1 MILERVEIVGFRGINRLSLMLE----------QNNVLIGENAWGKSSLLDALTLLLSPES 50 M L +V I F+ I LSL + ++GEN GKSS+L+A+ L Sbjct: 1 MRLSQVVIRRFKSIKELSLTIPARDERRQGSADFVSIVGENNVGKSSILEAIRLACPGSG 60 Query: 51 DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGR--------HRVRRYRPLEACWTP 102 D F I E L ++ W Sbjct: 61 KP---TIDQFRNLDPSIGPIEVELEFDRLTDADKEKHAVRVHLFVDHGVEKYRIKKVWRA 117 Query: 103 C---------TDGYHRIFYR----LEGESAEDGSVMTLRSFLDKDG----HPIDVEDIND 145 + + +R L+ ++ ++ +D + ++ Sbjct: 118 PGVIPESFAYSPDTRQYRFREWPDLKSKAEFANLGAEWKAIVDSADAAGSKKLSKPSKDN 177 Query: 146 QARHLVRLMP-----------------------------VLRLRDA----------RFMR 166 R V++ V LR+ +R Sbjct: 178 YLRAAVQMNSPLIEETEPWSPNPGGNLSNLDSVLPTVIWVPALRETGAEADVSEKQSAVR 237 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA-MVQLLEHYFSEQGA 225 +I N + + A EL + +I + A + L+ Sbjct: 238 KIVNALFEQQLSKHDKVIRFRRAAEELEQLFASDGKHKIVASVEAHITSKLKELIDICAD 297 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 + + +++ I+ + G + R I+L L + + Sbjct: 298 LRFTAPDVTADLASKTEFRVLDGNISTRPEHQGHGAQRSIVLALLQMWAEQLRIIGSSDA 357 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVEH-VCRLV 340 +R L LIE+PE LHP M L + Q + TT+S L L + + Sbjct: 358 SRTLFLIEEPEIYLHPEMCRRMRDALLRIAQSGIGQVVCTTHSPVFLDLADRHDGIVIVK 417 Query: 341 RESSRVAAWRLGPSGLSTEDSRRISF-------HIRFNRPSSLFARCWLLVEGETETWVI 393 + +S A + ++ + + F +VEG+ E + Sbjct: 418 KNNSNPVAIQRTRDIFGQDEGDKERRSRLRMLLNFDSAANEVFFTSRVTMVEGDCEIAAL 477 Query: 394 NELARQCGHHFD---------AEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAG 443 + +AR+ H + + VI P GI++ V+ D D+A Sbjct: 478 DAIARRLCHLGEIHWPTYLAARRSVAVINCRGKWTIPAFQVVLNEFGIKYRVVHDEDDAD 537 Query: 444 KKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGF 482 + A + ++ + + E ++ + + Sbjct: 538 E--ATRANDQIGA--LLPSQNCRLVHRPNFEEQIFGKNW 572 >UniRef50_C0N1Y3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1Y3_9GAMM Length = 595 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 79/611 (12%), Positives = 177/611 (28%), Gaps = 85/611 (13%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+++++ FR + LIG N GK+S+LDAL + + Y Sbjct: 1 MKLKKLKVQNFRAYQTETEISFSNMTGLIGRNDVGKTSILDALGIFFGHKLCKYEAGDKC 60 Query: 60 FWFPPGDI-------NGREHHLHIILTFRESLPGRHRVRR-------------------- 92 + + + + T SL + + Sbjct: 61 VYAGENEDVIITCEFEELPQEIVLDATSVTSLDREYLLTDGGTLSLSKVFKKGKGSGAYM 120 Query: 93 -------YRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRS---------FLDKDGH 136 R + D I L + ++ S ++LR L + Sbjct: 121 ANCVHPSARNAKGILLKKNDELKSIAQSLGIAAEDNRSNVSLREAIYDAVGDLKLKEQSV 180 Query: 137 PIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSH 196 + ED + +P L A R T + + ++S Sbjct: 181 ALSKEDGKAILEQIQNHLPHFALFRAD-----RPSTDEEAEVQDPMKVAISQAIEDISPQ 235 Query: 197 PQNLSDGQIRQGLSAMVQLLEHY--FSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMI 254 +++ D ++ L+ L H + A + I Sbjct: 236 LEDIKDQVKQRALTVANSTLSHLADLDPELAMSLTPDFKADPKWEGIFKLSLAGDDDIPI 295 Query: 255 DRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL 314 ++ G R++L+ F +A+ R +D + IE+PE HP + + + Sbjct: 296 NKRGSGVRRLVLISFFKA--EAERIKREYQDRGVIYAIEEPENSQHPDKQKLLVEAFSEM 353 Query: 315 P----LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRF 370 Q + TT+ L P++ + + + + ++ + Sbjct: 354 ADKDGCQIVITTHVPALAEQLPIKSIRHIFKNQDGEIEVNSNQDDVFKLIAKDLGVLPDS 413 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQCGHH-------FDAEGIKVIEFAQSGLKPLV 423 A+ + VEG + L+ + I ++ L+ V Sbjct: 414 R------AQVIVCVEGPNDIAFFKNLSALLLDEGHMAPDFENDPRIVLLPLGGDTLRDWV 467 Query: 424 K--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQG 481 + + +G + D D+ +N + + E++++ Sbjct: 468 NGHYLKNIGKPEVHIYDRDDQNPPKYQETCDAVNA--RGDGSIAFITSKREAENYLHPDA 525 Query: 482 FSDVFHRMAQIPENVPMNLRKIISKAI---HRSSKPDLAIEVAMEAGRRGVD------SV 532 + + ++ + ++ A+ R++K L A + + +D + Sbjct: 526 IQEALNISVTYTDDCDVPS--LVGAALGVNDRTAKRRLNRVAAKKMTKERLDGRDPDGEI 583 Query: 533 PTLLKKMFSRV 543 ++ R Sbjct: 584 LGWFNEILQRC 594 >UniRef50_C4B7R0 Putative endonuclease n=1 Tax=Desulfotignum balticum RepID=C4B7R0_9DELT Length = 552 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 81/529 (15%), Positives = 168/529 (31%), Gaps = 67/529 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + I FR I ++ L +L+G N GK++++DA+ DF Sbjct: 1 MKAVEISIHNFRSICDTTISLSDCGMLVGANNAGKTTVIDAIRAFYGKGIKFEKGR--DF 58 Query: 61 WFPPGDINGREHHLHII---LTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 N + F RR + + R Sbjct: 59 PHRGAIDNESWVEIEFKPNQAEFVNLKDDYKTDRRTFRVRN-YLFSDQKDAENKARSGPY 117 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + G++ R + K+ +I + ++ +L +R + N + V Sbjct: 118 AYIGGNLSDERFYGFKNVGQGKFGEI-IYIPAVSKVDEHTKLTGPSALRDLLNTVLSKVM 176 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQ----------IRQGLSAMVQLLEHYFSEQGAGQ 227 V + L+ + + + + I + LS + + G + Sbjct: 177 EQSVAYQALNASFSQFEGAIKTEATAEGHSIQTIETDISEELSNWGAGFKLNINPVGIDE 236 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK--- 284 L+ +E ++ I G R ++ GL + K Sbjct: 237 IIKGLVSHEIVDEDL------GTSQPISSYGQGFQRSLIYGLIRIAAKYSTKKPSAKKKD 290 Query: 285 --DARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLT--PVEHV 336 +L E+PE LHP +SV L L Q + ++++ + + + + Sbjct: 291 FVPELTWILFEEPEAFLHPTQISVLSADLRALGKSGSSQVLLSSHNPLFATHSIREISSI 350 Query: 337 CRLVRESSRVAAWRLGPSGLS---------------------------TEDSRRISFHIR 369 CRL R++ + +++++ L ++ + + + Sbjct: 351 CRLQRDNCQTSSYQISNQQLDAVLVSNQQDTQTWQTAGMTIDTDDLLTDMEAVKYALWLD 410 Query: 370 FNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARR 428 R ++ F+ LLVEG TET + + + Q G + G+ +++ + ++ Sbjct: 411 SKRSAAFFSEKVLLVEGPTETALFSYMRDQ-GKLPNCNGVVIMDTIGKFNIHRFMRLFEC 469 Query: 429 MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 GI+ +VL D D + D+E F+ Sbjct: 470 FGIKHYVLYDADNG----RHPAIDVTIQAATNPLTKGVDTFQKDLEDFL 514 >UniRef50_D2UFF3 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UFF3_XANAL Length = 616 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 82/617 (13%), Positives = 184/617 (29%), Gaps = 83/617 (13%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLY------ 53 M L V + FRG R + ++ IG+N GKS++L+AL + + Sbjct: 1 MKLSAVILENFRGYSQRTRIEIDDLTAFIGKNDAGKSTILEALDIFFNDGKPERGDACVH 60 Query: 54 ------HFERDDFWFPPGDINGREHHLHI----------ILTFRESLPGRHRVRRYRPLE 97 P + H + L + + + Sbjct: 61 STDTMIRIGCAFASLPTEIVLDAAAHTSLAAEHLLNEKGELEIIKEWDSSAKTPKESVFA 120 Query: 98 ACWTPCTDGY--------HRIFYRLEGESAEDGSVMTLRS--------------FLDKDG 135 P + R++ ++ +V + L++ Sbjct: 121 IAMHPTNADATDLLTLKNSDLKARVKKLGIDESTVSLAINGSMRQAIREACHPLTLERKS 180 Query: 136 HPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSS 195 P+D ED L +P+ L + + + V + + +EL+ Sbjct: 181 LPLDKEDAKKVWEQLRPQLPMYALFRSDRPSQDGDEEVQS-----PLKFAITQALKELAD 235 Query: 196 HPQNLSDGQIRQGLSAMVQLLEHYFSEQG-AGQARYRLMRRRASNEQRSWRYLDIINRMI 254 + + D + + L G + + + + + I Sbjct: 236 DLKKIEDAVRLRAEDVAKRTLAKLNEMDGRLASELKPFFKADPKWDVFKFGLVGDNDIPI 295 Query: 255 DRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL 314 ++ G R+ILL F + + T + + IE+PET HP + L L Sbjct: 296 NKRGSGVRRLILLNFFRAEAERRRTEKGALSV--IYAIEEPETSQHPDNQRLLVQALKEL 353 Query: 315 ----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRF 370 Q + T+++ L L P + + + +++ AA S +D I+ + Sbjct: 354 AIDENTQVLVTSHTPGLAGLLPSDSLRCVRKQADGTAAVS----HCSDDDLVVIANELGV 409 Query: 371 NRPSSLFARCW---LLVEGETETWVINELARQCGHHF-------DAEGIKVIEFAQSGLK 420 R + VEG + + ++ + ++ + LK Sbjct: 410 LPD-----RRVQVLVFVEGTNDIEFLEGISAMLKPSMADVVDFTSDSRVALVPLGGASLK 464 Query: 421 PLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMY 478 V + + +G+ + D D+A +N ++E++++ Sbjct: 465 QWVAKHYLKNLGLPEVHIYDRDDANPPKYQPECDAVNA--RTNGSWAVITTKRELENYLH 522 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVA---MEAGRRGVDSVPTL 535 S+ + + + + S P ++ E + + L Sbjct: 523 ADAISEGMNGIGITFTDTCDVPLIVAKAVHEASGSPRTWADILGDHKELADKVSRAKKRL 582 Query: 536 LKKMFSRVLWLARGRAD 552 + +++ ++D Sbjct: 583 NRDAVAKMTAARFSQSD 599 >UniRef50_A6X3P4 ATP-dependent endonuclease, OLD family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X3P4_OCHA4 Length = 681 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 91/668 (13%), Positives = 172/668 (25%), Gaps = 140/668 (20%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESD--------- 51 M LER I FR + + ++ + LIG N GKSS+L A+ S + Sbjct: 1 MQLERARIRNFRSLRDVEVVFGAHTALIGGNGAGKSSILKAIEKFYSTTKNCDADDFFGR 60 Query: 52 ----LYHFERDDFWFPPGDINGREHHLH----IILTFRESLPGRHR-------VRRYRPL 96 E + E + ++ + P R + + + Sbjct: 61 DQGQPIEIELTFHQLSEQEAAAFEDRVRDGRLVVTRIFDGGPSSGRYHGVVPQIPDFVAV 120 Query: 97 EACWTPCTDGYHRIFYRL------------------EGESAEDGSVMTLRSFLDKDGHPI 138 A R + + L DG Sbjct: 121 RAHSAATPKRAAYNALRENNPLYADLPTAGSAAAVDQAMLTWEAEHPDQLVLLPDDGQFF 180 Query: 139 -DVEDINDQARHLVRLMPVLRLRDAR-FMRRIRNGTVPNVPNV-----EVTARQLDFLAR 191 + + + + + +RDA + + + + + + Sbjct: 181 GFQNNSRGKLQQHTSFVFIPAVRDASADAADGKTSVIGKLLELLVRSQILQRPDVQAFKA 240 Query: 192 ELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ-----RSWRY 246 +L+ Q L + L A+ L R + Sbjct: 241 QLTEAYQALVSAENMPELGALAGTLTADLRGLYQDAEVSLAWREVGEMPVPLPMADVFLK 300 Query: 247 LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP------------------ 288 + +DR G R + L L + + Sbjct: 301 DEGFGGPVDRQGHGLQRAFIFTLLQHLARTAVPEGDEAPPDSDVDGSDDAPAAAAAAVMA 360 Query: 289 -----LLLIEDPETRLHPIMLSVAWHLLNLLP----------LQRIATTNSGELLSLTPV 333 +L IE+PE HP +L L Q I ++S +S+ Sbjct: 361 QAPTLILAIEEPELYQHPTKQRHFAEVLRGLSSGTLPGAQGHTQVIFGSHSPMFISMGKA 420 Query: 334 EHVCRLVRESS---------------RVAAWRL------GPSGLSTEDSRRISFHIRFNR 372 + + R A +L S + + Sbjct: 421 DEIRLTRRSHCDDSEFKQCSLQALDLGTVAQKLERGWNKPAGTFSAQTLMPRLHILGAEL 480 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKPLVKFARRMGI 431 FA +LVEG ++ + AR G +F+A GI ++ L R +GI Sbjct: 481 AEGFFATGVILVEGRSDKAALTATARMLGVNFEAAGIAILSTEGKANLDRPYVIFRELGI 540 Query: 432 EWHVLVDGDEAGKKYAAT-VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMA 490 +L D D+ + T L + + + A P D+ Sbjct: 541 PTFMLWDCDQQLPEAKRTPATDLALSKLAKPNDQIDAAPTSDL----------------- 583 Query: 491 QIPENVPMNLRKIISKAIHRSSKPDLAIE-VAMEAG------RRGVDSVPTLLKKMFSRV 543 + + K + + P++ +A +P ++ + R Sbjct: 584 --ISDCYAHFEKTLEHKLKEDLTPEVHTACLAAACEPFGVHPSNDAQKIPEIVYQTLLR- 640 Query: 544 LWLARGRA 551 A+ + Sbjct: 641 ---AKEQG 645 >UniRef50_Q138G7 ATP-dependent endonuclease of the OLD family-like n=2 Tax=Rhizobiales RepID=Q138G7_RHOPS Length = 669 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 95/691 (13%), Positives = 182/691 (26%), Gaps = 171/691 (24%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ +++ FR ++ + L + V +GEN GKS+ +DA+ LL +P + Sbjct: 1 MYLKNMKLNSFRSFDQGEIELQKDLTVFVGENNGGKSNAIDAVRLLTTPLGGRREIYCE- 59 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + F E G+ + + R Sbjct: 60 --STDVRFQSTTTYFELEGCFAELSTGQ---------QGRFISAATDASLTQARFGLRFD 108 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG-----TVP 174 S + + K+G+ +VR + + LRDA+ N + Sbjct: 109 GARSGIKPVLWAGKEGN-----SAEPGCHEMVRHVYLPPLRDAKRSLASGNPTRIMALLN 163 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 + A+ L R S DG + +GLSA+ + + G + + Sbjct: 164 HFLEGTTPAQLAKELGRTHSHDVLVKVDGAVEKGLSALTSGVRRQTASLG--FSTDEALV 221 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 A + + + + G ++ + + A L+ + L L L+E+ Sbjct: 222 DIARDLRFKLADHGVDPEDLRYSGHGYANLLFMAIIAVELEKVRSADL-----TLFLVEE 276 Query: 295 PETRLHPIMLSVAWHLLNLLP----------------LQRIATTNSGELLSLTPVEHVCR 338 PE LHP + + L LQ I T+S L + + + Sbjct: 277 PEAHLHPQLQAAVLAFLRDQAEQSRKDAPTDHAPSGELQVIVATHSPNLSAWVNSDRLVV 336 Query: 339 LVRESSRVAAWRLGPSGLSTE--------------------------------------- 359 + G + Sbjct: 337 FKSVVASAEQAPAGEPTIEPTVADAAVIGSGLGTDHTEADVTGTDALTATMTAAALRRST 396 Query: 360 -------------DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ--CGHHF 404 + R++ ++ + + LF LLVEG E ++ +A+ H Sbjct: 397 RCIPLSLMQLDALERRKVDRYLDVTKAALLFGGRVLLVEGIAEALLLPAIAKHHTLKEHP 456 Query: 405 DAEGI----KVIEFAQSGLKPLVKFA---------------------------------- 426 D + + P Sbjct: 457 DQLRLFRSTVFVPIDGVDFSPYATLLLTTVNGARIADRVVILTDGDKGTGDSDDDDDDEE 516 Query: 427 -------------RRMGIEWHVLVDGDEAGK--------KYAATVRSLLNNDREAEREHL 465 + + V+ D D+A + L + A Sbjct: 517 ELPSDTVEKVPANPALEQDTPVVSDADDAIDAEEPPIPGEMRKAALMSLASSLGASEHLA 576 Query: 466 TALPALDMEHFMYRQG----FSDVFHRMAQIPENVPMNL--------RKIISKAIHRSSK 513 +E + G + + + N K I + ++ K Sbjct: 577 AVTSIYSLETELLEAGNTAILRKAYLTLHPRSKKKWDNAVALSGDERAKKIHEIFKKTRK 636 Query: 514 PDLAIEVAMEAGRRGVDSVPTLLKKMFSRVL 544 D A +A VP + K V+ Sbjct: 637 GDFAQILARLIEDGDAFVVPDYIAKAIEEVV 667 >UniRef50_C9RMQ8 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMQ8_FIBSS Length = 592 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 91/461 (19%), Positives = 149/461 (32%), Gaps = 32/461 (6%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 L R+ I R I R + L LIG N GK+++L + LL+ S + D Sbjct: 7 RLSRITISNLRSIQRETFPLSDFTALIGYNNAGKTNILMGIRWLLANFSLDISYFDDPNH 66 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 + ++ + G + P + T RI L G Sbjct: 67 PVEAEGLFEGITEQVL-----NRLGEEKAAEVEPFLSGTTLRVKKVQRIPGELPGN---- 117 Query: 122 GSVMTLRSFLDKDGH---PIDVEDINDQARHLVRLMP-VLRLRDAR----FMRRIRNGTV 173 + +F +G V + R+ P + + D + + + Sbjct: 118 ---IEFWAFCPPNGKRKGKDWVRVNDKFTAAFNRMFPESIAIWDFEGNQAYTKLMHEIFK 174 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA--RYR 231 P Q+ EL S + +I+ + L F Sbjct: 175 PLERKFGGELSQVIEQFTELLSPGSDCQAEEIKAFDKEVNSALRPLFPSVRVELDIPVPT 234 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL 291 L S + D R I R G S R I + L L + K +R LLL Sbjct: 235 LETFLKSATIKVVDEDDGFERDISRMGAGSQRAIQMALIRYLAEIKKHHNNHYLSRKLLL 294 Query: 292 IEDPETRLHPI---MLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 I+ PE LHP ++ VA L+ Q I T+S ++++ V + + R Sbjct: 295 IDSPELFLHPQAVELVRVALKNLSNEGYQVIFATHSAQMVTSEDVSTSLLIRKNRERGTF 354 Query: 349 WRLGPSG----LSTEDSRRISFHIRFNRP-SSLFARCWLLVEGETETWVINELARQC-GH 402 R + + ++ + LFA LL EG+TE V+ L + G Sbjct: 355 MRKRMEDAVRQVVKDAPSQLQMLFSLSNSNELLFADYVLLTEGKTEWRVLPALFERITGQ 414 Query: 403 HFDAEGIKVIEFAQSGL-KPLVKFARRMGIEWHVLVDGDEA 442 F ++ + ++ M I +VD D A Sbjct: 415 SFALIKCALVRQGGVSNTRKSMQVLSAMDIPVRAIVDLDYA 455 >UniRef50_Q4JUU2 Putative uncharacterized protein n=2 Tax=Corynebacterium jeikeium RepID=Q4JUU2_CORJK Length = 543 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 84/571 (14%), Positives = 170/571 (29%), Gaps = 60/571 (10%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTL-------------LLS 47 ++ +V I F+G+ NV++G N GKS+LL+A+ L LS Sbjct: 1 MISKVRIRNFKGLQNYEATFSPQYNVIVGANGAGKSTLLEAIGLAIGGRINGQWPSDALS 60 Query: 48 PESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEA--------- 98 P ++ F + I + S R + + Sbjct: 61 PYWFHTQTTKEFFDAYSAGQRPEVPKIVIEVILDNSSKNPDLARLQGKMNSKNANETGLA 120 Query: 99 CWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 D Y + F+ E+G L + + + R L L Sbjct: 121 FEVSLNDDYTKEFWDYMAAWEENGVSAKLFPTEYFETYWHSFGSPDRLTRKPRGLNFALI 180 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + + R + + + L+ L S + L ++ + +++ Sbjct: 181 GPQSNSLNRGVDRYTRQLLEDHIPDEVAANLSVTLRSAF----TSSTQTALESVNEKIKN 236 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 + + S + +S I + G + + + Sbjct: 237 --DPAKPLKQLGIQIDPAVSGQWQSGITPAINSLPFSHAGFGEQ---------AIAKVEV 285 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHV 336 +L L+LIE+PE L L + L Q I TT+S +L+ ++ + Sbjct: 286 SLLKSATKADLILIEEPENHLSHTKLRQLLDRIKALGADQQIIVTTHSSFVLNRLGLDGL 345 Query: 337 CRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 + R S L + D + F+ + A +LVEG ++ ++ E Sbjct: 346 MLVERGVG------ARLSDLQSSDIKFFQKLPNFDTLRLILADHVVLVEGISDLLIVEEA 399 Query: 397 ARQ-CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455 + G A G+ +I + + A + + D D G+ + Sbjct: 400 FERNYGMGSSALGVDIISVEGVKHERWFRLAALLDKRVIGIRDND--GRDDGHWEKKYSA 457 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSD--VFHRMAQIPENVPMNLRKIISKAIHRSSK 513 + E+ +E + + IPE + K Sbjct: 458 SLGESFLVVGKKECGKTLESQLEYVNRENMPALKESLGIPEGQDFV-------EWSTAQK 510 Query: 514 PDLAIEVAMEAGRRGVDSVPTLLKKMFSRVL 544 D A+++ + +P + + + Sbjct: 511 SDAALKLVNLPDKDW--KIPDYINEAVRALF 539 >UniRef50_C8SCF2 SMC domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCF2_FERPL Length = 637 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 93/607 (15%), Positives = 199/607 (32%), Gaps = 72/607 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +ER+E+ FR I LS+ + VLIG N+ GK+S+L+A+ ++ + + D Sbjct: 1 MKIERLEVKNFRSIYDLSVEFGRITVLIGRNSSGKTSILNAIRVIFENLDTISTEKNLDV 60 Query: 61 W-----------FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + + + ++ ++ LE G + Sbjct: 61 NTITEQGLRDQIRGLWFYTHQNKPIKLAVSLNFDKEEGDTLKDICGLE-------SGVEK 113 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 + + E ++ L++ + V+ + + + + R+ Sbjct: 114 AYIEVSIEKNDNQITWKLQNIVVYGHVTETVKIAKEALEGMKEIHSKVTKRNVDLKAERF 173 Query: 170 NGTV-------PNVPNVEVTARQLDFLARELSSHP-----QNLSDGQIRQGLSAMVQLLE 217 N V N EV LD + ++ ++D I+ + + LE Sbjct: 174 NPLTQCVIVENGTVKNEEVLKSFLDIIKDKVYYIDTFSGVSKMADIPIKGLFTQSITPLE 233 Query: 218 -----HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFAT 272 A + R+ + D + G S L G Sbjct: 234 LMNAIRNVIRTFALRKMLYDYLRQIRGNIYEYEQPDRAETLTKSYEGTSLSYELFGSGDQ 293 Query: 273 LLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELL 328 + + + K + LIE+PE LHP + +L L +Q I T+S + + Sbjct: 294 ITEGILASIISKGKHHVFLIEEPEVHLHPAYVRSLAKVLEILANSLDVQLIIVTHSPDFI 353 Query: 329 SLTPVEHVCRLVRES--------------SRVAAWRLGPSGLSTEDSRRISFHIRFNRPS 374 + + VR+ + + + LS ++ + Sbjct: 354 AGLKDKRFVIGVRKELIETELEGYLTILPATIVFYPFRGGRLSES----LARELGVVPGY 409 Query: 375 SLFARCWLLVEGETETWVINELA-----RQCGHHFDAEGIKVIEFAQSGLKPLVKFAR-R 428 LF+ +LVEG ++ ++ +Q + ++ F + LK L+K R Sbjct: 410 FLFSDAVILVEGNSDRILLQRYIDILIEKQLLENLPKLSYTIVPFGRRNLKELIKVFRDD 469 Query: 429 MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHR 488 G+ V+ D D+ G+K + + E + D+ ++ + F Sbjct: 470 YGLRVFVIADNDQQGRKAVNDAKEM----ELRENYEVFTTNRKDILCYIKSEDFVKALDE 525 Query: 489 MAQ--IPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSR---V 543 + + + + ++ +++ K A + + R + +LK + + Sbjct: 526 SLRGNLEDKYDVVMQDKEIRSVIDEMKLHGACKNGEDLLHRLSGILFNVLKDVDENLLDI 585 Query: 544 LWLARGR 550 L +G Sbjct: 586 LEWHKGS 592 >UniRef50_Q3IKC8 Putative orphan protein n=3 Tax=Bacteria RepID=Q3IKC8_PSEHT Length = 693 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 80/589 (13%), Positives = 164/589 (27%), Gaps = 95/589 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPES------DLY 53 M L + I FR + + + E++ V +G N GK+S LS + Sbjct: 1 MKLAKAFIRNFRRLEEVEVDFEKSETVFVGPNNSGKTSATSIFRCFLSSRDFKIHDFSIQ 60 Query: 54 HFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP----------C 103 D + P GDI + + L F R + L + Sbjct: 61 RISEIDHYSPEGDITLPS--IELDLWFDFDPENISFGRAFALLSSVSIETYEVGIRCKYA 118 Query: 104 TDGYHRIFYR---LEGESAEDGSVMTLRSFLDKDGH-----------------------P 137 D +++ + + +L FL DG+ Sbjct: 119 VDDISKLWAEYDTIFPIDDDGKRKRSLSHFLGLDGNFKNHFSVQYSSLSRLDNDEIEETI 178 Query: 138 IDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHP 197 + + D LVR V R+ + + LD + ++ Sbjct: 179 LKLSDGKRILNSLVRADFVDAQRNMNDDEEASRSSKLSTAFASFYRNNLDQVDINDAAIQ 238 Query: 198 QNLSDGQ-IRQGLSAMVQLLEHYFSEQGAGQARYRLMRR----------RASNEQRSWRY 246 + + + + L + G A R ++ R S + Sbjct: 239 IIDENNEKLTEHYDEHFGSLMGVLNNLGVPAAHERRLKIISSISADVALRGSTDLIYIDA 298 Query: 247 LDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLR-LDKDARPLLLIEDPETRLHPIMLS 305 G ++L+ + Q + ++ L+ IE+PE LH + Sbjct: 299 ETAHELPEAYNGLGFKNLVLMAIQIRDFQLQWLQTLENRPLCHLIFIEEPEVHLHAQVQQ 358 Query: 306 ----VAWHLLNLL------PLQRIATTNSGELLSLTPVEHVCRLVR----ESSRVAAWRL 351 W++LN L Q + TT+S +L+ E V R E + L Sbjct: 359 TFIGNIWNILNNLDEDGIGSPQLVITTHSSHVLNSVDFEKVRYFRRCHRSEEDPTVSQIL 418 Query: 352 GPSGLS-------------------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 S + + ++ F+ +L+EG E + Sbjct: 419 RVSEIHNLRDFQASAVSTDGGEVDADAALDFLKRYLALIHCDLFFSDAAILIEGTVERLL 478 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 + ++ + + + + + +E + + + I + V+ D D Sbjct: 479 LPQMITKTSPNLNTKYLATLEVGGAYAHRFAELMTFLHIPYLVITDIDSVKPPEGGGRAK 538 Query: 453 LLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLR 501 + ++ + F+ + ++ R Sbjct: 539 -----ACCAVDAGAITSNASLKDMFVGKLLISDFNEIPAQDQSQADLDR 582 >UniRef50_C6J729 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J729_9BACL Length = 699 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 104/645 (16%), Positives = 202/645 (31%), Gaps = 104/645 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++I FR + + + ++ N +IG N GK++ L A+ L++ D Sbjct: 1 MHISSLKIRNFRNFQKANFVFKEGVNTIIGANGSGKTNALFAIRLIIDDSLPRSSTNLLD 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F N R H + I L F + T G +++R + E Sbjct: 61 TDFNRSLTNWRGHWIVISLHFDNLSNDDSSQALV--FQGTHTTDNRGSLNLYFRPKYEVR 118 Query: 120 E-------------------------------------DGSVMTLRSFLDKDGHPIDVED 142 + D S + L D + + Sbjct: 119 KRLFELSQELAEEEQFVDYLSSLKINQYESVLYGRGLADFSKDEVYKTLVGDFNNYTFPN 178 Query: 143 INDQARHL-------------VRLMPVLRLRD--ARFMRRIRNGTVPNVPNVEVTARQLD 187 +++ L LRD + + + N+ + + Sbjct: 179 PDEEDSSLLGTPANQYVFKNDFACTYAKALRDVIGDLKNPRTSPLLRLLSNLNINESSTE 238 Query: 188 FLARELSS-HPQNLSDGQIRQGLSAMVQLLEH-----YFSEQGAGQARYRLMRRRASNEQ 241 ++ + + + +IR+ + + Q L + Y R Sbjct: 239 TISSTIKDLNWHITNLPEIRELAAGVSQSLHNTVGHTYAPRIEINSNLSDDFRHTLKALN 298 Query: 242 RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHP 301 L + + D LL L L + A LLIE+PE LH Sbjct: 299 IKAGELSGEDYIGDLYEMSLGGANLLYLALKLEEYNRLDHEQNKAAHFLLIEEPEAHLHN 358 Query: 302 IMLSVAW-HLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED 360 + + N Q + TT+S + S ++ V + E++ + SGL D Sbjct: 359 HIQKTLFQKYHNHENTQILLTTHSSHISSSCSLDSVNIVYLENNCCEVSQPN-SGLDEND 417 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIEFAQSGL 419 RRI ++ R + LFA+ +LVEG+ E +I E+ + G D G+ +I + Sbjct: 418 VRRIERYLDATRSTLLFAKSVILVEGDAELILIPEMVKMAFGITLDEIGVSLINVGSTQF 477 Query: 420 KPLVKFARRMGI--EWHVLVDGD--------------------EAGKKYAATVRSLLNND 457 + + I ++ D D + ++ + R L++ Sbjct: 478 ENIAVLFSEERIRRRCAIVTDNDISIIPLGDEMYPDKEFQKKCKQSEESGKSRRQKLDDF 537 Query: 458 REAEREHLTALPALDMEHFMYRQGFSDVFH-----RMAQIPENVPMNLRKIISKAI---- 508 E + +QG ++ + + + ++ KI + I Sbjct: 538 SRDNSYISVYYGTNTFEVELIKQGNKNILENVIRKDIYKRQSDQNSSVEKINNSDISIYG 597 Query: 509 -------HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWL 546 + K LA+ +A + V +P + + + V L Sbjct: 598 KEILRLADKEGKGWLALSIAARLDKDVV--IPDYILEALAFVASL 640 >UniRef50_A8FWW1 ATP-dependent endonuclease of the OLD family n=3 Tax=Gammaproteobacteria RepID=A8FWW1_SHESH Length = 607 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 96/601 (15%), Positives = 189/601 (31%), Gaps = 98/601 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L+++ I FRGI + LE L+G N GKS++L+A+ L+L + Sbjct: 1 MKLKKLIINNFRGIGFAEIDLENFTTLVGPNNIGKSTILNAIHLVLDNKKPKLE------ 54 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEA----------CWTPCTDGYHRI 110 E + II F + R L CW Y Sbjct: 55 --DWPAQQASEEVMDIICEFGDLEDWEKRKSAISTLLHEDYLKVKMSACWNAEQTDYSYE 112 Query: 111 F------------------------------------------YRLEGESAEDGSVMTLR 128 + ++E ES ++ L Sbjct: 113 YSVYCVETQYPWSELNFTKAKADEVCKPIFKELGITKAAEFNERQVELESYIAENLPELV 172 Query: 129 SFLDKDGHPIDVEDINDQARHLVRLMPVLRLRD-------ARFMRRIRNGTVPNVPNVEV 181 S + + H++ + ++ D + F N P V E Sbjct: 173 SSVKDWHVKKFANSLQQAVPHVMYVPASFKIEDELKATNNSPFSFLFTNKLFPKVKGDES 232 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 + ++ DG +GL + + ++ ++ +L E Sbjct: 233 YSAYIEKATELQDKLKGKAEDGSEIEGLGDALGEVSKTLNQILDFDSKVKLAVGDIDVEP 292 Query: 242 RS-----WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 + D I + G R + + + + +++ D+ ++L E+PE Sbjct: 293 LFMKAATFLIDDEIETSLQYQGSGVQRALAFAMLEANAEVESSVQGDQRTV-VVLYEEPE 351 Query: 297 TRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTP-VEHVCRLVRESSRVAAWRL 351 +HP ++ + L Q I +T+S L+++ E + + + + A Sbjct: 352 LYIHPHLMRRLKNTLQTRSESPKWQVICSTHSPFLINIADKPESLKLIKKNAGNARAVHQ 411 Query: 352 GPSGLSTEDSRRISFHI-------RFNRPSSLFARCWLLVEGETETWVINELARQCGH-- 402 S + I SLFA+ ++VEG+TE V + ++ Sbjct: 412 VSSTIFETTEDYNERDILRAALDFHPTVCESLFAKRVVIVEGDTEVAVFSMISELANKLD 471 Query: 403 --HFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS-----LL 454 + VI + L+K + I++ V+ D D A + Sbjct: 472 VQDSLDKDTTVISAGGKWTITALIKVLNALKIDYRVIHDTDRKNLSDAELLEKAAIHPFK 531 Query: 455 NNDREAEREHLTALPALD--MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 N + A + ++ +D EH ++ Q + + P N +R I + ++ Sbjct: 532 ANAKIASVANAGSVFLVDDTFEHVLWDQVEGE-KAKSTDKPYNSWKRVRDYIDGKVELTA 590 Query: 513 K 513 + Sbjct: 591 R 591 >UniRef50_Q5LP69 Putative uncharacterized protein n=1 Tax=Ruegeria pomeroyi RepID=Q5LP69_SILPO Length = 586 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 73/589 (12%), Positives = 166/589 (28%), Gaps = 63/589 (10%) Query: 2 ILERVEIVGFRGINRLSL----MLEQNNVLIGENAWGKSSLLDALTLLLS-PESDLYHFE 56 L+ V I +RGI L N +G N GKS +L+ + L E E Sbjct: 7 FLDAVAIRFYRGIG-AELQSIGPFSAINFFVGANNAGKSIVLNFIHDRLPFCEGKSQRLE 65 Query: 57 RD--DFWFPPGDINGR------EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 + + G+ + + + V ++ + Sbjct: 66 PNSPEVHRGSGEEGEFVAAVGVPKERFLEAVWERFPQAQMHVHEFKGKVSAIFDELSVGE 125 Query: 109 RIFYRLEGESAED------GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA 162 +++R + + + F D++ + + + L+ + + D Sbjct: 126 CVWFRSGPQIGDREYHPQPDIEALSKLFPDREWNALWRSVQSSSGGGLIN-HWIPQSLDI 184 Query: 163 RFMRRIRNGTVPNVPNVEVTARQLDFLA----RELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + + + + D L L + + L E Sbjct: 185 LNRCSVLSFPTTQKIEAKRGIGRADEAFNGRGDGLIFELARLQEPGFNE--DEKRDLFEQ 242 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 + + R ++ + +D +D G + V+L+ F T+ Q Sbjct: 243 INAFLQEATGKPGARIRIPHDQSQVLVEMDGKVLPLDSLGTGIHEVVLIASFCTIHQ--- 299 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL-LPLQRIATTNSGELLSLTPVEHVC 337 ++ +E+PE LHP++ L Q T+SG + P + Sbjct: 300 --------DQIICMEEPEIHLHPLLQRKLVEYLRDHTDNQYFIATHSGAFIDT-PGAAIF 350 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA 397 + + + L +D R+ + + L A + VEG ++ +N Sbjct: 351 HVENDGQQTLVRP----ALVRQDKWRLLDDLGLHASDLLQANMVIWVEGPSDRIYLNHWI 406 Query: 398 RQCGHHF-DAEGIKVIEFAQSGLKPLVKF-----------ARRMGIEWHVLVDGDEAGKK 445 + ++ + + L RRM +++D D AG + Sbjct: 407 AAVDPDLREGIHYSILFYGGGLVSHLAAGAEEDGIQDLIDLRRMNRNMAIVMDSDRAGPR 466 Query: 446 YAAT-VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + + + + ++E+++ + + P Sbjct: 467 ARLKGTPERIKRELTDDWGMVWVTRGREIENYVDHAALQAALKTLHPRIYDRPAEGGAFD 526 Query: 505 SKAIHRSSKPDLAIEV----AMEAGRRGVDSVPTLLKKMFSRVLWLARG 549 ++ A G + + + R+ L+ Sbjct: 527 HAFYFLRRDGEVHQAANKVGAARLVCEGAAKL--DILDLQDRLSELSGR 573 >UniRef50_C6W937 SMC domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W937_ACTMD Length = 610 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 106/618 (17%), Positives = 176/618 (28%), Gaps = 78/618 (12%) Query: 1 MILERVEIVGFRGINRLS-LMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L I GFR + + + + +L G N GKSS LDA+ LL S + DD Sbjct: 1 MHLANFSIRGFRSLAEVEDIPIGSPTILAGPNDGGKSSALDAVKFLLGRYSPI----EDD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + G+ +G + + F + + ++ D Y + G Sbjct: 57 RTYLEGESDGGRADIDVSGRFLLDEWEQEKFSLPAVIKLRRIMEYDQDA--RYEVWGPIP 114 Query: 120 EDGSVMTLRSFLDKDGHPIDVE-----DINDQARHLVRLMPVLRLRDARFMRR---IRNG 171 +D + L D + + L+ + + N Sbjct: 115 DDEDLRDLSRSKVSDLRELVQKYGLRPQSPGNKPELLAAVQEYARGHSSGEGWTGAPPNL 174 Query: 172 TVPNVPNVEVTARQLDFLARELSSHPQNL----SDGQIRQGLSAMVQ------------L 215 T V T + LD A Q L + R+ + + L Sbjct: 175 TNRLPHVVTFTGKTLDPEAAVAEILGQQLKGYLQEESTRKQIEVLEGDAQDWLVAQAQPL 234 Query: 216 LEHYFSEQGAGQARY----RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFA 271 ++H M R + R +DR G S R I L ++ Sbjct: 235 VDHITRRCKDITEVAVKPDISMSPRLRSASLRLRRSTGEQVRLDRSGQGSARRISLAVWE 294 Query: 272 TLLQAKGTL--------RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRI 319 +++ ++P+T L L+ + Sbjct: 295 ASTDILVEEQQDEEMLAENGPPVPTIVVYDEPDTHLDYHYQREVMELIREQCRVPNTSVV 354 Query: 320 ATTNSGELLSLTPVEHVCRLVRES-SRVAAWRLGPSGLSTEDSRRISFH---IRFNRPSS 375 T+S L+ ++ V RL + R RLG + + + Sbjct: 355 VATHSMNLIDGVDLQDVVRLELDGTRRTRVERLGAATGHDGFDLHLQSIATAVGLRNSVL 414 Query: 376 LFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEW 433 L RC+L VEGETE I L + G + GI + SG L + G Sbjct: 415 LHERCFLAVEGETEQKAIPVLFKLSEGLQLQSAGIALWACDGNSGALDLASYLHEHGRTV 474 Query: 434 HVLVDGDEAGKKYAAT-VRSLLNNDREAEREHLTALPAL----DMEHFMYRQGF------ 482 +L+D D K RE + + L ++E + Sbjct: 475 VLLIDADCEVKDRMFREAALQRVFGREGYHKVVKFLGKRQGVMELEELFDDATWAETANA 534 Query: 483 ------------SDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVD 530 D + + S KP L + V + Sbjct: 535 QWPRVDGAPWSPDDFAAHRTGRKFSEGVVTMLKEEGETSPSGKPALVMAVVNRLK--SPE 592 Query: 531 SVPTLLKKMFSRVLWLAR 548 VP L+ F+ + LA Sbjct: 593 QVPEGLRDAFADLKELAN 610 >UniRef50_D1VTS9 ATP-dependent OLD family endonuclease n=2 Tax=Clostridiales RepID=D1VTS9_9FIRM Length = 656 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 81/651 (12%), Positives = 184/651 (28%), Gaps = 110/651 (16%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLY------ 53 M L +++I +R + L ++ + +++G N K+S + + +L Y Sbjct: 1 MRLSKIKIKNYRLLIDAELDIDAKTTLIVGRNNTAKTSCSNCINTVLQGNDFSYNDYPIS 60 Query: 54 ----------HFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC 103 F + + ++ + + Sbjct: 61 KRENLYNLFFQFMEKKLSYEDLCRGIEPISIEFVVDYSLDDQDTKLGALSPFIIDVDVDT 120 Query: 104 TDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVE---------------------- 141 T R Y+L+ + ++ + + + P E Sbjct: 121 TTALIRAEYQLKIDESKLRELFKDSCYSNDKFAPKAEEMHAKLASNFSRLFGLIIYAVNP 180 Query: 142 --------DINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV-------------PNVE 180 + + + L P+ R +N ++ ++ P++ Sbjct: 181 KNLEDWQVKSHRELKDLFPYYPIPAERILGEDGTQKNESLSSLIADYFSLNEEDLTPDIA 240 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 ++L + + + Q SD + +S V E G + + N+ Sbjct: 241 EKVKELRAVVDGANKNVQKESDRILSDLVSKAVGFGYPNVEELQLGVTTELKIDDQIKNQ 300 Query: 241 QRSWRYLD--IINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 R + G +I + A+ + PLL IE+PE+ Sbjct: 301 TRLSYSSGASDESLPSSHNGLGYKNLIKMEFLLAAF-ARDVEKKGDACIPLLFIEEPESH 359 Query: 299 LHPIMLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 +HP M L +Q TT+S + + + + S V L Sbjct: 360 MHPQMQHAFAEHLEKFLDKITTVHIQTFLTTHSAHIANTMDFSKIRYAKKSKSGVVYKNL 419 Query: 352 GPSGLST-EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH------- 403 ++ I ++ +R FA + VEG +E ++ ++ +C Sbjct: 420 DIFARENADNMDFIKKYLTLSRCDLFFADKIIFVEGASERLLLPDMIEKCEKEKLFDSEK 479 Query: 404 --FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL-------- 453 A+ +IE + + FA +G+ +L D D V S Sbjct: 480 YKLPAQYYALIEIGGAYAYKFIPFADFLGLPCLILTDIDSMIDGRTKAVVSKGKTTSNAT 539 Query: 454 ----------LNNDREAEREHLTALPALDMEHFMYRQGFS-----------DVFHRMAQI 492 + + + + A D E + + + + + Sbjct: 540 IKWWMRKIKGIPQNSKDKIYLADITAATDAEKTLRKCHIEYQTSENGICGRSLEEAIMNV 599 Query: 493 PENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 + + + + + K + + S+P +K + + Sbjct: 600 NRSHYGFTEPVAEEDLEFTEKSKTDFALNLICNNPN-YSIPQYIKNGLTWL 649 >UniRef50_B4S792 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S792_PROA2 Length = 579 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 85/556 (15%), Positives = 182/556 (32%), Gaps = 57/556 (10%) Query: 2 ILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 L + + FR I+ + + L+ VL+G N GKSS+L A +++ S DD Sbjct: 24 RLHKFIVKNFRAISSQPVEIELDDIVVLVGPNNAGKSSILRAYEIVMQHGSKDGRLTIDD 83 Query: 60 F---WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 F P ++ E H I + W + + Sbjct: 84 FPEGVVDPDNLPEVELHTIIYDKAPGDRWIHKTADSEWLIREQWVWDSPNKDPKRRGFDV 143 Query: 117 ESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNV 176 E + + +V + H + + + + + + Sbjct: 144 EKDDWDDQV--------PWGAPNVANARRPLPHRIDAFASPDTQATEIAKLVTSKLKDKI 195 Query: 177 PNVEVTARQLDFLARELSSHPQNLSDGQI---RQGLSAMVQLLEHYFSEQGAGQARYRLM 233 ++ Q + + + + L + + + + + + Y + Sbjct: 196 TTIKSDPEQEESDYDLVLAKIKALQTKVVEATEEEIEVIEKDISGYLEKIFPNHKVKFDA 255 Query: 234 RRRASNEQRSWRYLDIINRM----------IDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + E+ + + + I G + R +L L +A Sbjct: 256 KPETDIEKTYTPFKSNADVLLGPEGGYFSEIAHQGSGARRTLLWATLKYLSEANDGEGAR 315 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLT-PVEHVCR 338 +LL+++PE LHP + A +L L Q + T++S + L+ V R Sbjct: 316 P---HVLLLDEPEICLHPSAIREARSVLYELPSAGNWQVMITSHSPIFIDLSHDNTTVIR 372 Query: 339 LVRESS----RVAAWRLGPSGLSTEDS--RRISFHIRFNRPSSLFARCWLLVEGETETWV 392 + R+ S +R + LS +D ++ F ++VEG+TE Sbjct: 373 VSRDESAKVRSTTLFRPSRAKLSDDDKKNMKLLNICDPYVHEFFFGGKQVIVEGDTEYTA 432 Query: 393 INELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEA----GKKY- 446 + L H D + +++I G+ P + + + + +L D D GK Sbjct: 433 FSLLRSL--HPEDYKDVQIIRARGKGVIPSVARVLLQFSKSFSILHDTDTELTATGKANP 490 Query: 447 ----AATVRSLLNNDREAEREHLTALPALDMEHFMYRQG--FSDVFHRM--AQIPENVPM 498 +++ +L + E HL A E M+ + + + + + Sbjct: 491 AWGMNNSIKDILGWENAGEAVHLVAC-KTCFETAMFGEEVKTEKPYSALSRVRTDGDARK 549 Query: 499 NLRKIISKAIHRSSKP 514 N+++++ + + P Sbjct: 550 NVKQLLDSLLDPTLDP 565 >UniRef50_P13520 Overcoming lysogenization defect protein n=1 Tax=Enterobacteria phage P2 RepID=VOLD_BPP2 Length = 586 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 96/535 (17%), Positives = 183/535 (34%), Gaps = 42/535 (7%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 L V I FR S +L L+G N GKS+++ A+ LL D + Sbjct: 4 RLASVSISNFRSCKSTSAILRPFTALVGYNNAGKSNIILAIKWLLDGSL----ISESDVY 59 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 P H + + + + + DG R E Sbjct: 60 DP-------THPVSVEGVIQGITDDTLSLLTEENQQKIAPFIIDGTLTFARRQEFNKETG 112 Query: 122 GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDA----------RFMRRIRNG 171 + +L + + + + + DA + +I + Sbjct: 113 KAKKSLDVYDGTTWKKNPGGIDGAISNIFPEPIHIPAMSDAVEDSTKCKNTTTIGKILSA 172 Query: 172 TVPNVPNVEVTA--RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA---- 225 V + + + + + LS + +N + + + S + + + +F + Sbjct: 173 IVSEIKQEHEEKFSKNISEIGKYLSHNGENRLES-LNKIDSGVNKKVNQFFPDVSVKLHF 231 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 + + + + R + + R I R G + R I + L L + K K Sbjct: 232 PTPTLDEIFKSGTLKVFESREDEPVMRDISRFGHGTQRSIQMALIQYLAEIKKENSESKK 291 Query: 286 ARPLLLIEDPETRLHPIMLSVAWH---LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRE 342 + L+ I++PE LHP ++ L+ Q I +T+S +LS + ++ ++ Sbjct: 292 SNTLIFIDEPELYLHPSAINSVRESLVTLSESGYQVIISTHSASMLSAKHAANAIQVCKD 351 Query: 343 SSRVAAWRL---GPSGLSTEDSRRISFHIRFNRPS-SLFARCWLLVEGETETWVINELAR 398 S+ A + L S ++ + S LF+ LLVEG+TET V+ L + Sbjct: 352 SNGTIARKTISEKIEELYKSSSPQLHSAFTLSNSSYLLFSEEVLLVEGKTETNVLYALYK 411 Query: 399 QC-GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 + GH + I ++ G L + + +GI+ +L D D + LL+ Sbjct: 412 KINGHELNPSKICIVAVDGKGSLFKMSQIINAIGIKTRILADCDFLSNILLTEHKDLLST 471 Query: 457 DREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNL--RKIISKAIH 509 + + LTAL + F I + + + K IH Sbjct: 472 ECDN---LLTALIESINSGELSLNTKVTTFESFKSISSKDFIKICNHEKTQKHIH 523 >UniRef50_D1BNK3 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Veillonella parvula RepID=D1BNK3_VEIPT Length = 555 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 88/496 (17%), Positives = 161/496 (32%), Gaps = 76/496 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++ + I +R + ++L N +GEN+ GKS+ LD L +++ F D Sbjct: 1 MYIKWMHIENYRNLADVTLSFHNDINYFVGENSVGKSNFLDLLEIIMECHG----FIESD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + I ++ +T YRL E Sbjct: 57 F-------TDVNKPIRIDFEISLGELN---------YKSMYTADEG----PTYRLRLEQV 96 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 L D P+ P+ +R A ++ Sbjct: 97 VQEVYPRLYRVTDAGIEPM----------------PLSMIRHALYVCHRDTSEQELFSIP 140 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 +L L + S + ++ +++ + ++ + L+ Y L+ +++ Sbjct: 141 SAVYVELGHLLQAYVSRLE-MATDDLQREIVSLRKDLDPYC-----MLNIQHLIEVLSTS 194 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI----EDP 295 +Y R+I + I + + + + L D R L I ++P Sbjct: 195 SAIERKYSADNVRLIMAVALKILAQIYMKVSSATTNLEALLVYDGKGRKFLPIFISVDEP 254 Query: 296 ETRLHPIMLSVAWHLLNLLPL---------------------QRIATTNSGELLSLTPVE 334 E L P + + + Q T+S + L + Sbjct: 255 ELHLSPYLQRAVLNYYRQIATNENEEFLALLRDIFKIDGLLGQLFVVTHSTDAL-VDDYR 313 Query: 335 HVCRLVRESSRVAAWRLGPS-GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 H+ RL R+ + + G + E + + H +L+ARC ++VEGETE Sbjct: 314 HIIRLYRDENNMVCAACGVTFNFPKEVEKHLIMHF-PEAKEALYARCIIIVEGETEYGSF 372 Query: 394 NELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 ++ G FD GI +I S + L K R I L D D GK A Sbjct: 373 TGFGKKLGVDFDYFGICLINARGESSISKLQKLFNRFSIPTVALYDRDVEGKYAKAHSNI 432 Query: 453 LLNNDREAEREHLTAL 468 + E + ++ L Sbjct: 433 FYTQEICFEMDFVSYL 448 >UniRef50_A6BKR5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6BKR5_9FIRM Length = 716 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 76/637 (11%), Positives = 188/637 (29%), Gaps = 104/637 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++ + +R + S+ ++ +++IG+N GK+SL+ + S DD Sbjct: 1 MEIVKIRVKNYRALKDFSMDWQKTLSLIIGKNNCGKTSLISIMQTFFSEGKGP-GIRYDD 59 Query: 60 FWFPP---------------GDINGREHHLHIILTFRESLPGRHRV-------------- 90 F + + + L + + + ES + Sbjct: 60 FNLEFKLRLTDCIACKKSEWDNTDIQGIELFLYIEYNESDNIANISPLLMDLDPDNHMVV 119 Query: 91 -----------------RRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVM----TLRS 129 +Y + ++F R + +++ Sbjct: 120 LKIEYVLNDINQLKMDYDKYFEKLSSGKKNARNKQQLFERFMRDKSKNYFKTVYKAIKYD 179 Query: 130 FLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFL 189 + + +P ++ HL R++ + + R N T + + + R Sbjct: 180 YTIHECNPDIFTILDKNILHLSRIVSIKSIGAKRETDNKENDTSLSSLSNQYYERVKGEA 239 Query: 190 ARELSSHPQ-------NLSDGQIRQGLSAMVQLLEHY----FSEQGAGQARYRLMRRRAS 238 + + + G + +V ++ + +E + Sbjct: 240 GDPVLEEFEAQLLKTDHELTGLYSKVFEEIVGKVKRFGGTKENETIIQINSTLGRQELIK 299 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP----LLLIED 294 + G +I + + + A+ DK+ P +L IE+ Sbjct: 300 DNTVMTYKSGDQELPESYNGLGYLNLISIIIQIETIMAEFRCDSDKEKMPADINILFIEE 359 Query: 295 PETRLHPIMLSVAWHLLNLL-------------PLQRIATTNSGELLSLTPVEHVCRLVR 341 PE HP + + + L +Q + TT+S +++ + + R Sbjct: 360 PEAHTHPQLQYIFIKNIKELLREGKKCKDGSDIVVQTLITTHSSHIVAECDFDDIKYFCR 419 Query: 342 ESSRVAAWR---------LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV 392 S + + + + + + ++ N FA +L EG+TE + Sbjct: 420 VSPYAVISKNLCSLEAEYKDETDPNNKRYKFLKQYLTLNYAEVFFADKVILYEGDTERIL 479 Query: 393 INELARQC-------GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKK 445 + + R+ G ++ I +I + + + I+ ++ D D KK Sbjct: 480 LPAMMRKIDQEEEASGMPLLSQNISIIAA-GANSQLFSPLLAFLDIKTLIITDIDAVKKK 538 Query: 446 YAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKI-- 503 + + E + ++ +++ + + + + Sbjct: 539 EIKGKGTYYVACEVEKGEKTSNHAL----NYYFKEALENWGRNDLTFFKKQNARQKVLSY 594 Query: 504 ISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF 540 I K ++ L I G + P + F Sbjct: 595 IQKNWQQNEDGKLMIAY-QTKEENGKEYYPRSFEDAF 630 >UniRef50_B4SKF9 OLD family ATP-dependent endonuclease-like protein n=4 Tax=Proteobacteria RepID=B4SKF9_STRM5 Length = 604 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 78/481 (16%), Positives = 154/481 (32%), Gaps = 44/481 (9%) Query: 2 ILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 + ++ I FR I R + + L+ VL+G N GKSS+L A L++ + +D Sbjct: 24 RMHKLVIRNFRAIGRQAVEIELDDIVVLVGANNTGKSSILRAYQLVMESGAKG-DLLAED 82 Query: 60 FWFPP--GDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE-- 115 F G E I L + ++ + +G + R Sbjct: 83 FPGGYVTGAELKDEDMPSIELETVLFADSKPPADKWIDVR------PNGDRHVRERWTWC 136 Query: 116 --GESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLM-PVLRLRDARFMRRIRNGT 172 G+ + G + L ++ G + R+ + A + + Sbjct: 137 CPGKPKKRGFNVELNAWDANHGPWGTASVAQSNRPEMHRIEAFDDPKKQADSIISLLEEA 196 Query: 173 VPNVPNVEVTARQLDFLAREL---SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 + + +L + Q + + + + L ++ G + Sbjct: 197 TKQRVKALIEEEGKEGAYAKLLAGVAELQKAVATEAMEAIDEVRLELVRAMADVFPGYSI 256 Query: 230 YRLMRRRASNEQRSWRYL----------DIINRMIDRPGGRSYRVILLGLFATLLQAKGT 279 R + + D ++R G + R ++ + K Sbjct: 257 TLDARPEDDLSRSISFFKAPPVLRMGPADGHQSDLERQGSGARRTLMWNALRIIADHKAG 316 Query: 280 LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELLSLT-PVE 334 + + +LL+++PE LHP + A ++L LP Q + TT+S + L+ Sbjct: 317 AKGTERPH-VLLLDEPELCLHPAAVRDACNVLYSLPGGKTWQVMVTTHSPAFIDLSRNNT 375 Query: 335 HVCRLVRESSRVA----AWRLGPSGLSTEDSRRISF--HIRFNRPSSLFARCWLLVEGET 388 + R+ R + +R + L ED R+ F ++VEG+T Sbjct: 376 SIVRVERSQAGTVSGTTIFRPDRARLGDEDKERLKLLNMYDPYVAEFFFGGRTVIVEGDT 435 Query: 389 ETWVINELARQCGHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYA 447 E E+ + ++ + L K + + VL D D K Sbjct: 436 EYAAFREVIA--DDPAKFHDVHIVRARGKYTIVALCKILNQFKCSYSVLHDADLQRSKNR 493 Query: 448 A 448 Sbjct: 494 K 494 >UniRef50_A5EBD7 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A5EBD7_BRASB Length = 610 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 86/488 (17%), Positives = 160/488 (32%), Gaps = 38/488 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + R++I GFRG ++L ++ VL+G N GK+++++AL LL + + DF Sbjct: 1 MHIIRLKISGFRGARSADILLGRHAVLVGSNNSGKTTIIEALALLFGRDRLVRRLTEHDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA- 119 D R + + F + P H + P + + + Sbjct: 61 HGSAPDETARIFCIATVTGFTPNDP-HHHASWFSPERGVEKWFDPNAMTLTATADAQHTD 119 Query: 120 -------------EDGSVMTLRSFLDKDGHPIDVEDINDQARHL-------VRLMPVLRL 159 E+ T+R F+D + D + R + + V Sbjct: 120 LAVQIGFAARFDLEELEAETIRFFVDDEATLGDPFAEDAHLRTIYTKTLQELGFFLVPAS 179 Query: 160 RDARFMRRIRNGTVPNVPNVE-VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 R + V Q R+ P + + + GLS +V Sbjct: 180 RTWDRWISFSSELFRRVVATRGDMPAQAVRAERQRLWAPPEGARLEDQPGLSEIVGAAND 239 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDR--PGGRSYRVILLGLFATLLQA 276 A + +L ++ + + P R ++ LL Sbjct: 240 ELRALMASAPKLQLRLTATDSDSVLESVMPHFVQGTGPTLPSQRQGTGLVSLQSLLLLMQ 299 Query: 277 KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHV 336 G R + +L +E+PE + P + LN L Q I TT+S + +L P + Sbjct: 300 FGKARAETGQSFVLAVEEPELHIQPSQQKRLVNRLNALCDQTIVTTHSPIVAALFPAPNT 359 Query: 337 CRLVRESSRVAAWRLGPS--GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN 394 + + A L + T + + + R ++L C L+ EG ++ + Sbjct: 360 LFIETREGVLKAKPLMSAVPAQPTNHQQHLLYAWRQKLVAALMHECVLIPEGVSDVAWLE 419 Query: 395 ELARQC-----------GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAG 443 L G + + ++ + + + +LVDGD G Sbjct: 420 ALQTALELHQSWQDAGDGASLLSTFVGIVPTIDAKIADTFTLVSAVHARPCILVDGDNDG 479 Query: 444 KKYAATVR 451 + Y VR Sbjct: 480 RGYFDVVR 487 >UniRef50_A9AVV6 ATP-dependent endonuclease of the OLD family-like n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVV6_HERA2 Length = 708 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 90/608 (14%), Positives = 190/608 (31%), Gaps = 83/608 (13%) Query: 1 MILERVEIVGFRGINRLSLM-LEQNNVLIGENAWGKSSLLDALTLLLS--PESDLYHFER 57 M + V I FR I L NVLIG+N GKS++L A+T L+ F Sbjct: 1 MKITDVIIKNFRSIEHAQLNGCGDINVLIGKNNAGKSNILLAITTFFEFMERGKLFTFIE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D N + + I + F S ++ Y+P T I L+ + Sbjct: 61 DSKDTINFFNNSEDSIIEISIKFNISQSDIDNLKIYKPENNTKNTYTKLSITIVNLLDKK 120 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF------------- 164 S + ++ + + ++ IN+ +LV+ +L + Sbjct: 121 SKVNAKILKNITLEGDKSNHELLDIINNNLSNLVQYHIILNYISSETLILNEIKEKNKSG 180 Query: 165 ---------------MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL--------- 200 R N N E+ ++ + ++ ++ Sbjct: 181 FEQAISMLNNIIKSNNREHFNDIKKGAKNQELLDNLIEERIKSNNNDELSVIEGILNTTK 240 Query: 201 -SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGG 259 S+ + + + ++ ++++ + + R + +N + + R Sbjct: 241 HSNIDLEKLILSLKEIVQRISNHFHHIKERRPELDINDANVFLELKKKKASKATLQRIQT 300 Query: 260 RSYRVILLGLFATLLQAKGTLRLDKDA------------------------RPLLLIEDP 295 + V+ + + A + LD D ++LIE+P Sbjct: 301 IANMVLGITIDAFVEDDNSDPVLDVDNFLIQVNGYGVKEALRIIFDYEIHRPKVVLIEEP 360 Query: 296 ETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 E LHP + L + Q TT+S + V++V + + S Sbjct: 361 ELHLHPSLEMNLMRYLKEISAECQIFMTTHSTNFIDTGDVKNVYLVSKNESTTV-----R 415 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 + + E + I + S + VEG+ + ++ G + I + Sbjct: 416 ALNTEEAASLIPQELGLRLSSLFMYDKLIFVEGKLDEEILRTWTATLGVNLSQHNIGFVT 475 Query: 414 FAQSGLKPLVK------FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTA 467 + F + I+ L+D DE ++ ++ L+ ++ Sbjct: 476 MEGVFNQTYYAAEATLDFLSKKQIQTWFLIDRDERDQQQIDRIKQPLSGK-----SNVRV 530 Query: 468 LPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRR 527 L ++E++++ F R + I + I + + +R Sbjct: 531 LNKREIENYLFVPRAIAQFLRDKGQISGLQATTEGITEEMIQQQITTCVETCKQQVIEKR 590 Query: 528 GVDSVPTL 535 +P L Sbjct: 591 IAARLPAL 598 >UniRef50_A5FDQ0 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FDQ0_FLAJ1 Length = 793 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 71/565 (12%), Positives = 162/565 (28%), Gaps = 94/565 (16%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + + FR + + + LE +++ +G N GK+S L L + F D Sbjct: 1 MHLKSITVKNFRRLKKTQIDLEKDDSIFVGANNSGKTSATYLLYRFLEDQKA--KFSLHD 58 Query: 60 FWFPPGDI------------NGREHHLHIILTFRESLPGRHRVRR--------------- 92 F I + + L F+ HRV Sbjct: 59 FSSHCWKIFDDLGNSETLLKASEFPSISLDLWFQIQSSDLHRVLDLLPSLEWQNAPVGAR 118 Query: 93 --------------YRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPI 138 Y+ ++ + + + + Sbjct: 119 VEFSVKDVSTLMENYKQAKSKAVANKKEQYHPWPKNLSDYLRKNLNQEFNFKFYVLDFEK 178 Query: 139 DVEDIN-------------------DQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 D N + ++++ + R R+ + N Sbjct: 179 FDNDFNQEEGYEPLTLGNDTDRSGSKIIKSIIKVDILNAQRHLTDNNSARSEDLSKRMNR 238 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQ-LLEHYFSEQGAGQARYRLMRRRAS 238 + + S+ ++ LS + L+ + G +L+ + A Sbjct: 239 FYERNLRKKENDYEAMRALDNSEKELTAHLSEVFAPTLQSLNNLGYRGFNDPKLLIKAAL 298 Query: 239 NEQRSWRYLDIINRMID----------RPGGRSYRVILLGLFATLLQAK-GTLRLDKDAR 287 N + + + D G +I + + A+ ++ Sbjct: 299 NSEMIASQTKLHYALSDDPELMALPDQYNGLGFKNLIYMVIEILDFHARWMDDEENRAPL 358 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNL----------LPLQRIATTNSGELLSLTPVEHVC 337 L++IE+PE LH + V + Q + +T+S ++ + + + Sbjct: 359 HLVIIEEPEVHLHAQLQQVFIREIRKVIQKAETSEFFATQVVISTHSPHIIYESGFKPIR 418 Query: 338 RLVR---ESSRVAAWRLGPSGLST----EDSRRISFHIRFNRPSSLFARCWLLVEGETET 390 R + + L S + + + +++ FA +LVEG E Sbjct: 419 YFQREIDDDGHQKSNVLNLSTFYDGSRPKTIKFLQQYMKLTHCDLFFADGTILVEGNVER 478 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV 450 ++ + + +A I +IE + K +G++ ++ D D + Sbjct: 479 LLLPMMINKSASELNASYITIIEVGGAFAHLFKKLINFLGLKCLIITDIDSMLGRDE--T 536 Query: 451 RSLLNNDREAEREHLTALPALDMEH 475 L++ + + +E+ Sbjct: 537 SKTLSSTVCFDNKTPFKDSPDSLEN 561 >UniRef50_B0S1X8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0S1X8_FINM2 Length = 542 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 80/566 (14%), Positives = 173/566 (30%), Gaps = 49/566 (8%) Query: 2 ILERVEIVGFRGINR-LSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 ++++V I F+ L L N+L+G N GKS++L+A+ L L+ + R+ Sbjct: 1 MIKKVRIKNFKCFKDWFELDLNGGINILVGNNEEGKSTILEAIHLALTGFYRGNYINREL 60 Query: 60 FWFPPGDINGRE-------------HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 + E + I + F E D Sbjct: 61 SQYLFNREVVEEYLTNINSNSPCALPEIIIEIYFSELDDA-----------NLEGSGNDL 109 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 + + D S + G + I + R+ R Sbjct: 110 GLKEEIGFAFKVLFDNSYEDEYKLFMEKGE-LSSLPIEYYKSEWLGFN-----RENITTR 163 Query: 167 RIRNGTV----PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSE 222 I + + + + + + + + R + +S + + E + Sbjct: 164 GIPSKSFLIDNSSYKYKDGSDQYISNMIRGTLDNEDLISISKAFRETKDDFSKNESVKNI 223 Query: 223 QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + ++ S + + MI Y GL L + Sbjct: 224 NEKLSESKSNLGKKVSLGVNLGSNFNWESSMITEFDSIPYSNAGRGLQCLLKTELALNNI 283 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCR 338 + + ++LIE+PE L ++ ++L Q I +T+S +L+ +E++ Sbjct: 284 NTNKDKIILIEEPENHLSYSNMNNLINILQENSNKESNQIIISTHSSLVLNKLGLENLIL 343 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELA 397 L + + LS++ + ++ L +LVEG ++ +I Sbjct: 344 LSNK------KSSKITNLSSDTEKYFKAVSGYDTLRVLLCDKAILVEGPSDELIIQRAYK 397 Query: 398 RQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNND 457 + G GI +I + ++ ++ + +V+ D D + + +++ Sbjct: 398 DRYGKLPIFNGIDIISV-GTSFLRFLELGDKLDLNLYVVTDNDGDVEALIRKYKDYESSE 456 Query: 458 REAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLA 517 + DM+ F Y + N N K S +I + K + Sbjct: 457 KIKIYYDEKTYSG-DMDKFNYNTLEPCILRANDLKTLNSIFNTNKKDSDSILKYMKKNKT 515 Query: 518 IEVAMEAGRRGVDSVPTLLKKMFSRV 543 P + ++ V Sbjct: 516 NCAVSIFESESKIKYPEYINRVIEDV 541 >UniRef50_B2SJS5 Putative uncharacterized protein n=2 Tax=Xanthomonadaceae RepID=B2SJS5_XANOP Length = 535 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 82/560 (14%), Positives = 168/560 (30%), Gaps = 53/560 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLL----LSPESDLYHF 55 M +ER+ I F+ L L L + N+++G+N GKS+LL+A+ + L + Y Sbjct: 10 MPIERIVIDNFKSFRHLDLPLNSHMNLVVGDNEVGKSTLLEAIHAVVTGQLHGRNLAYEL 69 Query: 56 ERDDFWFPPGDI-----------NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 F P + + + L +L + Sbjct: 70 TPYLFHQPTVNEYLAALQAGTPASPPRIAIEAYLGSDAALASLRGTNNSLGFDTAGIRLL 129 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF 164 + + + + AR + + Sbjct: 130 VELNDDYREEFNAYLQQHQGVVSLPVEYYTVRWYSFAHNGVTARS-IPFDSTIIDTHGIK 188 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 + + + +T Q L+ Q+ S+ ++A + EH Sbjct: 189 TLSGADRYIAGIIEQALTPAQRVSLSLSFRRMRQSFSEEADVAAINAYLT--EHTGDISH 246 Query: 225 AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 R++ E YLD + G +S + L + A Sbjct: 247 RTLTVGVDTSPRSTWETSLSPYLDELPFTQAGKGEQSAVKMKLAMHAA------------ 294 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVRE 342 A +LLIE+PE L ++ + L Q + T+S +L+ V++V + Sbjct: 295 GAAHVLLIEEPENHLSFSSMTQLIDKIAALSSTQQVVIATHSSFVLNKLGVDNVILFSAQ 354 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELARQCG 401 ++ L ++ + + A+ +LVEG ++ ++ G Sbjct: 355 G------QMKLDQLPSDTHDYFMKLPGHDTLRLILAKQAILVEGPSDELIVQRAYRDHHG 408 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 A G+ +I K ++ A R+ I+ V+ D D N Sbjct: 409 VAPLARGVDIISVKSLAFKRFLQIAERLHIQAKVITDNDGDIAVVQERYADYPNAIYYDS 468 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVA 521 E + +E + R + + + ++ + K D A+ + Sbjct: 469 DESV-----PSLEEQLIRANSLALLNTVLGKSF-----ADEVALLKYMKGHKTDTALAIF 518 Query: 522 MEAGRRGVDSVPTLLKKMFS 541 P +++ + Sbjct: 519 NSPHSIR---FPDYVQRAIT 535 >UniRef50_C0BU00 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU00_9BIFI Length = 566 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 83/577 (14%), Positives = 185/577 (32%), Gaps = 54/577 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESD----LYHF 55 M ++ + + GF+ ++L + L N+++G+N GKS+LL+ +T +L + + Sbjct: 1 MYIKEMRVFGFKRFSKLQVELSPGINIVVGDNDAGKSTLLEVITAVLDGQYRGTSLARNL 60 Query: 56 ERDDF-------WFPPGDINGR--EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 D F + + + I F + + + Sbjct: 61 SEDLFNAENVATYIKNIRSGTQCEPPEILIEAVFGGNDQEELLALYEGDANSKGAKESGI 120 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 RI + + E + R G PI+ + + PV +A + Sbjct: 121 SLRITLDTDSFANEYQEFVDSRECF---GIPIEYYSCSWTTFARKSIRPVGIKFNASLIG 177 Query: 167 RIRNGTVPNVPNV-EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 N V AR + + ++ + + Q+ + + + Sbjct: 178 GGHAFAWANAKAVVSRIARNVLEPSDQIVISQAHRQMRSNFSANEKVQQINDKISEKVES 237 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 + + A + I ++ L ++K Sbjct: 238 LTRKTVTLGFEADTVSSWENGIVTKLENIPFSNVGDGTKSIITAELALSKSK------DG 291 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCRLVRES 343 + ++L+E+PE L LS+ + +Q I TT+S + + ++++ L + Sbjct: 292 QKDVILLEEPENHLSHTRLSMFLDDVKNRCKDIQLIVTTHSSFVANKLDLKNLILLNGDE 351 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELARQCGH 402 + L + SR ++ L + +LVEG+ + V+ G Sbjct: 352 ------STSFADLQKDTSRFFMKAPGYSTLRVLLCKASILVEGDADELVVQRAYLDSYGR 405 Query: 403 HFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL-LNNDREAE 461 +GI VI ++ AR++ + V+ D D + + R N EA Sbjct: 406 LPIQDGIDVISVRGVTFLRFLEIARKIEKDTVVITDNDGNVEALRSKYRDYPFINSPEAT 465 Query: 462 REHLTA--------------LPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKA 507 H + +E +Y ++ ++ N + K Sbjct: 466 NAHQVISYDESYLTEGKAKKVNYNTLESEIYESAGAEKLAKILGRSNNNRDETLDYMEK- 524 Query: 508 IHRSSKPDLAIEVAMEAGRRG-VDSVPTLLKKMFSRV 543 K ++A+++ + + + ++ S+V Sbjct: 525 ----HKTEVALKIFDATEKITYPNYIVKAIEWAASKV 557 >UniRef50_Q13XN0 Predicted ATP-dependent endonuclease, OLD family n=3 Tax=Proteobacteria RepID=Q13XN0_BURXL Length = 782 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 74/545 (13%), Positives = 146/545 (26%), Gaps = 107/545 (19%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+++ + FR + + + L ++ +G N GK+S+ AL L F D Sbjct: 1 MHLKKLVVRNFRRLRNVVIDLASDISIFVGANNSGKTSVGHALQLFTGGG----RFNIHD 56 Query: 60 FWFPPGDIN-------------GREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 F + I + HRV P A Sbjct: 57 FSAELWPDIVAFGEDEGEGVGESSLPQIEIDIWLEIGPDDVHRVIDLLPSLAWEGTLVGM 116 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLM------------ 154 R E+ + + R+ + + R+L + Sbjct: 117 RVAYAPRNPAETRARYAEVRQRALDAVAKNEDGAPVFDPSPRNLREFLRDRLHDEYELCH 176 Query: 155 -------------------PVLRLRDARFMRRIRNGTV--------------PNVPNVEV 181 P R R I NG + P E Sbjct: 177 FVLDPARFSANMIPEDGYAPAPLTGRDRSGREILNGLLHIDFLNAQRHLSDGPGGSRAED 236 Query: 182 TARQLDFLA-RELSSHPQNLS--------DGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 + L R L +++ + + + L + + S+ G Sbjct: 237 LSHVLSRFYGRNLEQKGEDIEALRALAASEVSLNEHLERVFEPTLKSLSKLGYPGLSNPR 296 Query: 233 MRRRASNEQRSW-----------------RYLDIINRMIDRPGGRSYRVILLGLFATLLQ 275 M R++ + D G +I + + L Sbjct: 297 MMIRSALDPVKIMNGRDGAIVHYALGGDDGNPDPPTLPDHYNGLGFKNLIFMVVELLDLH 356 Query: 276 AKGT-LRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-----------PLQRIATTN 323 A+ + + L+ +E+PE LH + + + Q + TT+ Sbjct: 357 AQWLAIEGSRPPVHLIFVEEPEAHLHAQLQQAFIRKVMDILALKDEDRTHYTSQVVVTTH 416 Query: 324 SGELLSLTPVEHVCRLVRE--SSRVAAWRLGPSGLST----EDSRRISFHIRFNRPSSLF 377 S +L + R + + L S + + +++ F Sbjct: 417 STHILYERGFRPIRYFRRSRLQNVPTSDVLNLSLFYDSTDPDIRSFLERYLKLAHCDLFF 476 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLV 437 A +LVEG E ++ ++ + + V+E + +G+ ++ Sbjct: 477 ADGAVLVEGNVERLLLPQMIANAAPRLQSTYLTVLEIGGAFGFRFKTLIEFLGLTTLIIT 536 Query: 438 DGDEA 442 D D Sbjct: 537 DLDSV 541 >UniRef50_A2SK58 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Proteobacteria RepID=A2SK58_METPP Length = 608 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 79/547 (14%), Positives = 169/547 (30%), Gaps = 77/547 (14%) Query: 1 MILERVEIVGFRGINR-LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE---------- 49 M L+ V I FR ++ L++ +G+N GKSS+L+AL + + + Sbjct: 1 MRLKSVAIKNFRCYREEATVQLDELTTFVGKNDIGKSSVLEALEIFFNNDVVKIEAGDAN 60 Query: 50 ----SDLYHFERD-------------------DFWFPPGDINGREHHL--------HIIL 78 + D D + + + + Sbjct: 61 VYSGDSRLSITCEFSDLPASLTLDAGAVTTLADEHLLTADGTLKIQKIYDCKTKTPSVEV 120 Query: 79 TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPI 138 P V L+ + +L+G ++ + L + Sbjct: 121 FLVAHHPTADGVAGLLDLKEKELQALIKAKGLAVQLKGNPGMRKALWDAEADLKIAEVTL 180 Query: 139 DV----EDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELS 194 + ED L +P+ L + R +G V P A + + E+ Sbjct: 181 ALTKPKEDSKRIWEQLESHLPMFALFQSDRSSRDSDGEVQT-PMKAAVAAAIAEVQDEID 239 Query: 195 SHPQNLSDG--QIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINR 252 + + + +I Q ++ ++ +++ Q + + D I Sbjct: 240 LIQKRVKEKAEEIAQSTHKALKAIDPNLAKELTPQFTPPTTAKWTGLFSVNMDTDDGI-- 297 Query: 253 MIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLN 312 +++ G R++L+ F + + + IE+PET HP + Sbjct: 298 PLNKRGSGVRRLVLVSFFKAAAE-RRMASGGNTRSIIYAIEEPETAQHPNNQKILIESFK 356 Query: 313 LLPL----QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHI 368 L Q + TT+S + P + + + R+++ G + E ++ + Sbjct: 357 ALAGESGYQVLLTTHSPGFAAELPTDSIRFVTRDANDNPKIEAGVDVFA-EVAQALGVVA 415 Query: 369 RFNRPSSLFARCWLLVEGETETWVINELARQCGH------HFDAEG-IKVIEFAQSGLKP 421 + L VEG T+ L+R +G + I S L+ Sbjct: 416 DSKV------KVLLCVEGPTDVTAFKCLSRALHLADATIPDLGNDGRVAFIVLGGSTLQH 469 Query: 422 LVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYR 479 V + + +G + D D A + +L + ++E++++ Sbjct: 470 WVAGHYLKALGRPEVHIYDSDVATYGASVAAVNL-----RTDGSWALQTLKYEIENYLHA 524 Query: 480 QGFSDVF 486 + F Sbjct: 525 DAIQEAF 531 >UniRef50_B1LUG1 Putative uncharacterized protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LUG1_METRJ Length = 566 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 72/585 (12%), Positives = 162/585 (27%), Gaps = 82/585 (14%) Query: 20 MLEQNNVLIGENAWGKSSLLDALT-------LLLSPESDLYHFERDDFWFP------PGD 66 + N IG N GKS++L+ L L SP++ + E D + Sbjct: 3 PFKDFNFFIGANNSGKSTILNFLKNNIPPWSLHTSPQTPKPNVEPVDIYDGGRTGRPWMA 62 Query: 67 INGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL------------ 114 I + + +H + G + L Sbjct: 63 IGIPAEQFEKRFADQLTPNVKHPIATLANERIFELMKRKGCFWLQSELPFSVDLKLDSPL 122 Query: 115 -EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRL---MPVLRLRDARFMRRIRN 170 + E S F+ + D++ + + L L + R + +R Sbjct: 123 SFEDWKEALSDQEWSHFIQTLRNASYGGDLDSKISRIFDLMERNQAPALPEVRLIPAVRE 182 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + + R L + + Q A+ + + + + Sbjct: 183 IGTEEYSQSDYS-------GRSLVMKLAQIQNPDPFQRNDAL--IFDKINNFLSDVTDKP 233 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 + + ++D + G + VI++ + TL + K ++ Sbjct: 234 GARIEIPHHRKFVMVHMDGRILPLSSLGTGIHEVIMIAAYCTLAEQK-----------IV 282 Query: 291 LIEDPETRLHPIMLSVAWHLL-NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW 349 IE+PE LHPI+ L Q T+S + P + + + + Sbjct: 283 CIEEPEIHLHPILQRKLIRYLIKNTDNQYFIATHSASFIDT-PGAAIFHVTHDGQQTYI- 340 Query: 350 RLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF-DAEG 408 + + I + + + + + VEG TE + +Q + Sbjct: 341 ---EESILAAERHNICALLGYRASDIVQSNAVIWVEGPTERIYLRHWIKQIAPELTEGIH 397 Query: 409 IKVIEFAQ----------SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAAT-VRSLLNND 457 ++ + +K + R + +++D D+ + + + N Sbjct: 398 YSIMFYGGRLLSHLSADDVDVKDFIDL-RALNRNIAIIMDSDKEHEDDTINETKMRVANG 456 Query: 458 REAEREHLTALPALDMEHFM----YRQGFSDVFHRMAQIPENVPMNLRKII---SKAIHR 510 + + ++E+++ + V+ + P + + R Sbjct: 457 IASSTGVIWITKGREIENYINFDQLQDAIKAVYPNLYDRPNGSGTFEHALFFRRKEKFSR 516 Query: 511 SSKP------DLAIEVAMEAGRRGVDSVPTL-LKKMFSRVLWLAR 548 KP L L+ V+ + R Sbjct: 517 KGKPPTYVDEGADKVKVATRVCMDPTDFSILDLRNRVEDVVAMIR 561 >UniRef50_A3EUF6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A3EUF6_9BACT Length = 657 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 84/622 (13%), Positives = 173/622 (27%), Gaps = 95/622 (15%) Query: 1 MILERVEIVGFRGINRL-SLMLEQNNVLIGENAWGKSSLLDALTLL-----------LSP 48 M L ++ + FR + L Q L+G+N GK+++L AL L L Sbjct: 1 MKLTKIHVTNFRSVEDSGEFDLGQVLCLVGKNEAGKTAILQALAGLNPHPLTPVNYDLER 60 Query: 49 ESDLYHFERDDFWFPPGD----------INGREHHLHIILTFRESLPGRHRVRRYRPLEA 98 + D D G + I+ RRYR + Sbjct: 61 DYPRRWLTEYDNRHKESDAMVVSTKWELSEGERKAIKEIIGDALLDEPVTIYRRYRDTQP 120 Query: 99 CWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVL- 157 W D I + GE + L + D +ED+ +++ RL+ L Sbjct: 121 QWKLPIDYGKAIEILISGEKLSEEERQPLSEAKNSDDLRKALEDVKERSPKQQRLLDKLN 180 Query: 158 -----------------------------------------RLRDARFMRRIRNGTVPNV 176 + + + G + Sbjct: 181 GFPGKNVIGLVTNILKGSLPQFLYSSHYDRMVGQIRLDTYNARKQGQQQPPLEPGERVFI 240 Query: 177 PNVEVTARQLDFLARELSSHPQNL----SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 +E ++ + + N + I + L + E +A Sbjct: 241 DFLEYAGTSIEEITTATTYESLNARCEAASNHITEQLQEYWTQNPNLGIEVRVTKAEQND 300 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 R + ++++ RS I F +LL+ Sbjct: 301 PPPFNQGVIARARVRNNLHKLTLPFSERSAGFIWFFSFLVKFAQVR----KTGENLVLLL 356 Query: 293 EDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLTPVEHVCRLVRE------- 342 ++P LH + ++ Q + +T+S ++ + V + + Sbjct: 357 DEPGLTLHGKAQADLLRYISEKLSPNHQVVYSTHSPFMVPPDDLPSVRIVEDKILQLRPG 416 Query: 343 SSRVAAWRLGPSGL--STEDSRRISFHIRFNRPSSLF-ARCWLLVEGETETWVINELARQ 399 ++ L + + + + +LF + LLVEG + + + Sbjct: 417 QWTSEGTKVRDDTLATDRDTLFPLQGALGYEITQTLFVGKHTLLVEGPGDILYLYAWSSA 476 Query: 400 C---GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKK--YAATVRSL 453 G + ++P V ++ L D + KK + + Sbjct: 477 LQRRGKAGLDRRWTICPAGGIDKIQPFVALFAGQKLDIAALTDYARSDKKKLESLRQNRV 536 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSK 513 L N+R + L D+E ++ + + + + + K + AI S++ Sbjct: 537 LENERLLTFATILELEEADIEDVFVPSLYASILNDAFGLDSSQRLTTDK-LDAAISSSTR 595 Query: 514 PDLAIEVAMEAGRRGVDSVPTL 535 ++ A P Sbjct: 596 ---LLKKAEACFAVLPPEAPEF 614 >UniRef50_A9L496 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Shewanella baltica OS195 RepID=A9L496_SHEB9 Length = 613 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 92/576 (15%), Positives = 182/576 (31%), Gaps = 76/576 (13%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHF---E 56 + L+++ I GF+GI R+ + + NV++G+N GKS++L AL L ++ + Sbjct: 2 IKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNNT 61 Query: 57 RDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRR--YRPLEACWTPCTDGYHRIFYRL 114 D F + + I + V Y L W G Y + Sbjct: 62 TDQFSVIELYFSPNNTPIVIDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYFV 121 Query: 115 EGESAEDGSVMTL----------------RSFLDKDGHPIDVEDINDQARHLVRLMPVLR 158 E S D +L L + + + ++ L Sbjct: 122 ERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDTGEEHNNAEKRNRLREFFVERG 181 Query: 159 LRDARFMRRIRNGTVPNVPNVEVTARQ-LDFLARELSSHPQNLSDGQIRQGLSAM----- 212 + ++ + E + L L+ P + SD I++ M Sbjct: 182 DESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQVI 241 Query: 213 -----------------VQLLEHYFSEQGAGQARYRLMRRRASNE------QRSWRYLDI 249 +L S+ A ++ + + Sbjct: 242 QDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNGN 301 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 + + G R+ ++ F L + K + + E+PET LHP + Sbjct: 302 GSVPLSARGDGFRRITMMAYFEYLAEQKS----GEIQNIIFAFEEPETFLHPSAQENLFE 357 Query: 310 LLNLLPL---QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISF 366 LN + + Q TT+S ++S T + R+ +E+ ++ + + Sbjct: 358 KLNDISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCDSKVND--HSDIANDLGI 415 Query: 367 HIRFNRPSSL-FARCWLLVEGETETWVINELA------RQCGHHFDAEGIKVIEFAQSGL 419 I S +C+LLVEG + N LA +F G+ I G Sbjct: 416 TIDNQFISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGS 475 Query: 420 KPLV---KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHF 476 + + + + +D D+ + + L E ++ ++E++ Sbjct: 476 IKHWVTLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENY 535 Query: 477 MYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSS 512 M +G + +P + KA+ +S+ Sbjct: 536 MSLEGIERL------VPGANLIFTDWCDVKALSKSN 565 >UniRef50_C6X564 Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X564_FLAB3 Length = 550 Score = 171 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 65/498 (13%), Positives = 154/498 (30%), Gaps = 32/498 (6%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ ++I FR I + N+ +G+N GK++ +A+ + S E F Sbjct: 1 MKIKAIKIDNFRSIQQTEFTTTDFNIFVGQNNCGKTNFFEAVEFFFNGISKSTKLEDLKF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 E + + +TF ++ G +++ F R + Sbjct: 61 ------KRETEREIIVEITFTGAIDGVAQMQNVANRTKIENALDGSDIVTFKRSSLLPTK 114 Query: 121 DGSVMTLRSFLDKDGHPIDVEDI---NDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + G + D + V + + + +G + + Sbjct: 115 RKMFINGTEVNPGTGFDAALNDFLPKFEYINTKQYYDSVAKYGKTTPIGIMLSGVLTAIL 174 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRA 237 +Q REL + + + + LE F + + Sbjct: 175 QENEQYQQFQAKFRELFEDDNSEIKAEFDNVGNNVKIHLEKQFPDCTKVKFEVSAPVFDD 234 Query: 238 SNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPET 297 + D I + + G R ++L + + + L I++ E Sbjct: 235 LLKNFETTVDDGIETLAEEKGDGMQRALMLAIIQAYADFRKANEDVGKSF-LFFIDEAEL 293 Query: 298 RLHPIMLSVA---WHLLNLLPLQRIATTNSGELL-SLTPVEHVCRLVRESSRVAAWRLGP 353 LHP H+L+ Q T+S + + + ++ + S + + Sbjct: 294 HLHPTAQRNLKNVLHILSQTRDQVFINTHSSVFVADNYTSQTIFKVEKNSGETSITSVTD 353 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 + + + L + +L+VEG +E ++ + ++ + + I++++ Sbjct: 354 LE----KPYVVFELLGGSPADLLLPKNFLIVEGLSEFELLTRVIKR--FYSEKPVIQIVK 407 Query: 414 FAQ------SGLKPLVKFARRMGIEWH-----VLVDGDEAGKKYAATVRSLLNNDREAER 462 + + K + + +L+D + +K A + L+ + Sbjct: 408 ANGDIDQAERSINAIEKLFAPLDTSIYKNRAIILIDQ-PSAQKQAGVAQFLVTYNHLNIN 466 Query: 463 EHLTALPALDMEHFMYRQ 480 L D+E Q Sbjct: 467 NQFFRLVERDIEQCYPNQ 484 >UniRef50_C6BF20 ATP-dependent OLD family endonuclease n=1 Tax=Ralstonia pickettii 12D RepID=C6BF20_RALP1 Length = 677 Score = 171 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 63/551 (11%), Positives = 142/551 (25%), Gaps = 106/551 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQN---NVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M L + I+ FR + + L+ +L+G N GK+S ++A+ L + + Sbjct: 1 MKLSEIAIMNFRLLQYARMRLDTTGITTILVGPNNSGKTSAIEAMLTFL--QRPIKQLSI 58 Query: 58 DDFWFPPGDINGR-------------------------------EHHLHIILTFRESLPG 86 +DF D + L + + ++ P Sbjct: 59 NDFSLGCRDALKKFEQHVLAPPAAAAPAGGEAAVAAPPPLPDLPVLSLRLKFDYDDTGPD 118 Query: 87 -----------RHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTL-------- 127 + + + + + +D S+ Sbjct: 119 LAIAGELLMDLEDASASVMVEIRFAPANPEQLAQAYLK---DRDDDQSLFDYLAATLHDH 175 Query: 128 ----RSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTA 183 + L DG + + L+R+ V R T + Sbjct: 176 YKLDQFKLSPDGSEAERLPDRGILQRLIRIDVVSAQRHIDDREEGSKATRLSTLLHTHYE 235 Query: 184 RQLD-------FLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 R+ + + Q + +++ L + + + Sbjct: 236 RRYKVDAPNDFKALEKTLRDQSTILGPQYVKAFDGLMKGLAKFGHPESPKLTVRAELSAD 295 Query: 237 ASNEQRSWRY------------------LDIINRMIDRPGGRSYRVILLGL-FATLLQAK 277 + + Y G +I + L + + Sbjct: 296 GLFKDTTRVYYSAASATTPPAEGPAAALDQAFELPERYNGLGFKNLIYIVLCLKSFREDV 355 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--------PLQRIATTNSGELLS 329 + + L+++E+PE +HP M +V ++ +Q + TT+S + + Sbjct: 356 ESDLEHRPRVHLVVVEEPEVHMHPQMQAVFVQKVSEFLTPAAGETGVQLLLTTHSSHMAA 415 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGL------STEDSRRISFHIRFNRPSSLFARCWLL 383 + R V L + ++ R FA + Sbjct: 416 NCGFAPIRYFRRNKGTVEIKDLLSFECSATTDPEKAAMEFLRKYLTTTRCDMFFADKLVF 475 Query: 384 VEGETETWVINELARQCGHHFDAE----GIKVIEFAQSGLKPLVKFARRMGIEWHVLVDG 439 +EG+ E ++ L + + +E + K + + V+ D Sbjct: 476 IEGQVERMLLPRLIAALDIALRDKLTSTYVCTVEVGGAYAHLFRKLIEFLQLPALVITDL 535 Query: 440 DEAGKKYAATV 450 D Sbjct: 536 DSIDGTTKKKA 546 >UniRef50_A9HWQ9 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=A9HWQ9_BORPD Length = 605 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 160/508 (31%), Gaps = 45/508 (8%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 + ++IVG R + +S+ LE L+G+N GKS++L AL +L P + E DF Sbjct: 3 KIGFIDIVGLRACHHVSIPLESFTPLVGQNNAGKSTILFALAWVLKPSA----LEASDFA 58 Query: 62 FPPGDI--NGREHHLHIIL-TFRESLPGRHRVRRYRPLEACWT------PCTDGYHRIFY 112 I R + + + + + + + W P G+ + Sbjct: 59 KEGEPIVVTARIDGITAEILEYVPEPKHQAAIAPFCNTGSMWIRVVCTAPGPKGFTCEVF 118 Query: 113 RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT 172 ++ + A +G + RS+ + + + + D Sbjct: 119 DVD-QYAGEGIPKSWRSYPTGLSQAVSALLPEP--------LQIDAMEDLAEDLGKAKAG 169 Query: 173 VPNVPNVEVTARQLDFLARELSSHPQNLSD------GQIRQGLSAMVQLLEHYFSEQGAG 226 +++ + EL S Q D + L + G Sbjct: 170 STLKSLLDLIMGPIIETHDELVSALQTFKDILSTDGASRSEHLKTFDDGATKALGDFFPG 229 Query: 227 QARYRLMRRRASNEQRSWRYLD------IINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 A M+ E L R D+ G R I + L L K Sbjct: 230 LAIELGMQTIEVKEFFKAGNLHVTDLETGDRRTFDKLGTGCQRAIQMALIRHLADLKIG- 288 Query: 281 RLDKDARPLLLIEDPETRLHPI---MLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVC 337 AR LLLI++PE LHP L A L+ Q + T+S +LS Sbjct: 289 SKPLAARRLLLIDEPELYLHPQGVKRLRQALAALSQKGFQVVYATHSPLMLSRENAADAV 348 Query: 338 RLVRESSRVAAWRLGPSGLSTEDSRRISFHIRF-----NRPSSLFARCWLLVEGETETWV 392 + + + RL R N F +L EG+TE + Sbjct: 349 IIRKTKTDGTLARLPLRHAVASALHEAQAQSRTLFELGNLAEIYFCDLVVLCEGKTEKRL 408 Query: 393 INELARQC-GHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATV 450 + L + G H + + + + P + MGI+ + D D A + Sbjct: 409 LPLLYERLRGRHPELDQVAFVAVGACSDIPKALPVLAAMGIQACGIADLDFAFTEARKGQ 468 Query: 451 RSLLNNDREAEREHLTALPALDMEHFMY 478 + +L E L L ++H Sbjct: 469 QPMLPKHDETLVRSKDVLKKLKLQHEFP 496 >UniRef50_B0P4C0 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4C0_9CLOT Length = 576 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/517 (12%), Positives = 159/517 (30%), Gaps = 43/517 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E V+I FR I + + + ++GEN GK+++L A+ +L+ + F+ Sbjct: 3 MRIEEVKIKNFRSIKSATFRMNKITAVVGENNAGKTAVLRAINAVLNYMDEEMSFKNKTH 62 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + +I ++F E ++ + + ++ Sbjct: 63 QYAVRSNT------YITISFVEVPD------------KVIYKDKIDIDKLVIKFVYKYSK 104 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 D ++ ++ ++ + + R + + N V + Sbjct: 105 DK---EQYMYVKDGEEKSVDDEFMKNLSKDIKYVYIPAGRTNKDVSWEENSIFKEVVSNY 161 Query: 181 VTA--RQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 + + D ++ ++ + + D + + L + L Sbjct: 162 MYKHTKNRDRISGDVRKVAKKIHDSALTTLEKDINTLYMQNQTMDFKFDFADDLDYSVLL 221 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + + + ++ G + + ++ ++ L ++ +L IE+PET Sbjct: 222 KKIKFSLNECGTDYLLKEWGSGTKSLAVIAMYRA-------NALLEEESIVLGIEEPETN 274 Query: 299 LHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 LHP H L Q I TT+S L+ E + + R+ ++ S Sbjct: 275 LHPQAQKRFIHSLRNELHDNETQTIFTTHSTVLVDELQHEDIILIRRKKDSKRGFKSVLS 334 Query: 355 GLSTEDSRRIS-------FHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 L + + F++ ++ E + + VI +L + A+ Sbjct: 335 QLQKNFWEKYGLEEFKHYQFFNYKNSDFFFSKYVVIGESKNDIQVIKKLIESKIQNVIAD 394 Query: 408 GIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 + +E + + I + ++VD D V + + Sbjct: 395 -VSFLELGGIEFLKYPYFLLKELEIPYMMVVDKDVFFDYKNGKVDESRDVKSGLPKYKYE 453 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKI 503 + ++ R+ ++ K Sbjct: 454 MKDNIVLKDIFKTDQEMRKIERLNSQGYKKFVDEIKK 490 >UniRef50_Q6M0D9 Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis RepID=Q6M0D9_METMP Length = 626 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 93/570 (16%), Positives = 177/570 (31%), Gaps = 90/570 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYH----F 55 M L +V I +R I L L +Q NV++G+N GKS+++ A+ ++L ++ Sbjct: 1 MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENI 60 Query: 56 ERDDFW--------------------------------FPPGDINGREHHL----HIILT 79 + DF+ F N ++H+ I Sbjct: 61 SKSDFFNADTSEDILIVCELSKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRI 120 Query: 80 FRESLPGRHRVRRYRPLEACWT-------------PCTDGYHRIFYRLEGESAEDGSVMT 126 F + W + + +R E + Sbjct: 121 FYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVDRYALVFRARFEENVIKKDLV 180 Query: 127 LRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQL 186 L D + + N +L++ + RD + RI N T E T + Sbjct: 181 LLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN 240 Query: 187 DFLARELSSHPQNLSDGQIRQGLSAM-VQLLEHYFSEQGAGQARYRLMRRRASNEQRSWR 245 +E + S+ + ++ ++ F + + + Sbjct: 241 GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIY 300 Query: 246 YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLS 305 D + G + +GLF ++ ++ LL IE+PE LHP Sbjct: 301 VDDGFKSELKDKGSGIQSAMTIGLFNFYIKHIAH-----NSGSLLAIEEPELYLHPHGRR 355 Query: 306 VAWHLLNLL----PLQRIATTNSGELLSLTPVE-HVCRLVRESSRVAAWRLGPSGLSTED 360 + L+ Q I TT+S E + ++ + ++ S A+ L D Sbjct: 356 IISDRLSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSESKAYN-----LQFND 410 Query: 361 SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH--------------FDA 406 + I+ FA LLVEG + +++ E +++ G + Sbjct: 411 IKTRQILIKKQNSEMFFADAVLLVEG-ADKYILEEFSKEYGETKQVKSESELLGKNWLNN 469 Query: 407 EGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE---- 461 + +I L+ V + I + L D D + ++ L ND + E Sbjct: 470 YNVSIINCGGKTELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGL 529 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQ 491 + T L + DV + + Sbjct: 530 KSKFTFLNKGKCIDDVPDDFKKDVIEYLKK 559 >UniRef50_B0QUR6 Predicted ATP-dependent endonuclease of the OLD family protein n=2 Tax=Haemophilus parasuis RepID=B0QUR6_HAEPR Length = 582 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 79/590 (13%), Positives = 167/590 (28%), Gaps = 81/590 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L ++ I FR I+ + + + +L+G N GKS+++ AL + E Sbjct: 1 MKLRKIHIKNFRSIHDVEIEVHNYTMLVGANNAGKSNIMAALRAFYEDVAWTKDDEPKFN 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + E + + ++ + Y + E + Sbjct: 61 SSVLENEIEVESWVELKFELTDNEWN-------ALADKYKGTKEKHLTVRKYFISKEKVK 113 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLR-LRDARFMRRIRNGTVPNVPNV 179 + N + L +++ + + + M+ + ++ N+ Sbjct: 114 PRQSNIYGIVDGVIDESLFYGAKNIGSAKLGQIIYIPAFISASEQMKTSGASPLRDMLNL 173 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQG---LSAMVQLLEHYFSEQGAGQAR------Y 230 + ++ A + + + + + L + + S G Sbjct: 174 MLKKALVNSPAYQKVITSFDEFNDEAKNKNGFLDQIANPINSAISSWGIKFDMSIGAISP 233 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR--- 287 + + L +DR G R L L + + ++ Sbjct: 234 EDITKNLIRHSFVDSMLGDYALSLDRYGHGFQRSFLYELIKLVPEISNENNTTQEKNDFN 293 Query: 288 ---PLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLT--PVEHVCR 338 L+L E+PE LHP + L L Q I T++S + + + R Sbjct: 294 PDFTLILFEEPEAFLHPTQQENMAYHLRRLGEGNEQQVIITSHSPIFVGKATDSLCQIGR 353 Query: 339 LVRESSRVAAWRLGPSGLST---------------------------------------- 358 + ++ + ++ L Sbjct: 354 VHKKDGLTSLGQIKLEELGNIFSSGLDFKICLQNFVNNANIPDDRKKTAKELLKNSEQNN 413 Query: 359 -----EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA--RQCGHHFDAEGIKV 411 + R + R S FA LLVEG TE + N L H F I V Sbjct: 414 EIEIQNEKFRYQLWLDSERSSMFFADKVLLVEGPTEKALFNWLLANNHDWHTFTKHRIAV 473 Query: 412 IEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPA 470 ++ + GI + +++D D+ K + + +L N + Sbjct: 474 VDVIGKFNFHRYMTLLDIFGIPYGLILD-DDLNKNHHQAINDMLKNYDCNCKIAEPVFIP 532 Query: 471 LDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEV 520 +E ++ S + +I + I+ K + + Sbjct: 533 QCIESYLGLNLPSRADLKPLEI---LKKLENNEINADKLNDLKRKFMLAL 579 >UniRef50_B0A6Q1 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0A6Q1_9CLOT Length = 581 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 79/554 (14%), Positives = 192/554 (34%), Gaps = 26/554 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 MIL++++I FR N +S+ L+ NV+ G N GK++ L AL LL + F D+ Sbjct: 1 MILKKLDINNFRNFNSISIELDNKNVVFGMNDVGKTNFLYALRFLLDKDIRKNGFMPTDY 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + + + + + +D + R+EGE E Sbjct: 61 HR---HNTKEKIQITLTVDLSDFYESEDTKKFVSETRDGGVRTSDRGDIFYIRVEGEYNE 117 Query: 121 D---GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDAR-FMRRIRNGTVPNV 176 + G + +D + + ++ +L+ + L D + + R Sbjct: 118 EEVFGEPIMKWGDNLEDLKDMPFRGTSYSIDNIFKLVYINPLVDLQKVFEKNRRYIFDEN 177 Query: 177 PNVEVTARQLDFLARELSSHPQNLSD-GQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 + + + +D + + + I + + +E+ + + + + Sbjct: 178 SSDKEDKKLIDKINNLTKEVNDQIGNMSIINNFQKDITDEYKKLNNEELSIEIKSEMAIN 237 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 ++ + + + G +++ LF + + + + L+E+P Sbjct: 238 GFFSDLMPYIKRENDDNYYPTSGDGRRKILSYSLFNYI-----NKKKYDNKIVIYLLEEP 292 Query: 296 ETRLHPIMLSVAWHLLNLLPLQ--RIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 E LH M L +T+S ++L + R+ + Sbjct: 293 ENNLHRSMQISLSKQLFDDDTYKYLFVSTHSSQILYEMDKAMLIRIHSKE---KIECNSY 349 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIE 413 + + + ++LF LL+EG +E + ++ + ++ +G +++ Sbjct: 350 LYKIEPNYKTDKKKLNREFSNALFYENVLLIEGPSERILFEKILDEVNPDYEQQGGYILQ 409 Query: 414 FAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 + + K ++ + + I+ V D D GKK LL +R + + + Sbjct: 410 VSGTYFKTYIRALKGLDIKVIVKTDNDLRGKKGNIQEYELLGINRCCD-----LINMDKI 464 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDL---AIEVAMEAGRRGVD 530 E+ + ++ L K I++ + ++ I++ + Sbjct: 465 ENIIMPFNSETKREEKLTQLKSKKKELYKEYESLINQFKQNNIYLSEIDLENDLFSIIGP 524 Query: 531 SVPTLLKKMFSRVL 544 + L+K +V+ Sbjct: 525 KMSKYLQKEEHKVV 538 >UniRef50_C4Z3V4 Putative ATP-dependent endonuclease of the OLD family n=4 Tax=Firmicutes RepID=C4Z3V4_EUBE2 Length = 568 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/577 (11%), Positives = 168/577 (29%), Gaps = 67/577 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER-- 57 M + +V+I F+ + LE+ N+++G+N GKS++L+A+ L L+ Sbjct: 24 MFIRKVKIHNFKCYRDFEITLEEGLNIVVGDNEAGKSTILEAINLALTGIISGKSIWNEI 83 Query: 58 ----------DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 D++ G ++ I + F + + Sbjct: 84 SQYIFNKEAVDEYIVSLGTAPIALPYITIEIFFGGDEN-------PLMNGDANSDRDNSA 136 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDI-------NDQARHLVRLMPVLRLR 160 +++ L + PI+ DI + + L Sbjct: 137 EGFCFKIAFNDKYADEYEALVQQRNVKSLPIEYYDITWTTFARDAITTRSIPYKSSLIDS 196 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF 220 + + + + + + +A+ + + A+ + Sbjct: 197 SEYRYKSGNDLYLSRIIKGSLEPEDITSIAQAHRKMRDTFIN---DPSIEAINNKINQ-- 251 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + + + + L I ++ L + Sbjct: 252 --DASLTDKKIALSVELVTKNAWENSLVTQLDEIPFHYVGKGEQCVVKTELALAKRTSQN 309 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCR 338 ++L+E+PE L L+ ++ Q + +T+S + + + V Sbjct: 310 A------SIILLEEPENHLSHTRLNQLIKCISEQYAEKQILISTHSSFVANKLGLRKVML 363 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L + S LS + ++ + + +L EG+++ VI + Sbjct: 364 LEN------LKIIKFSELSGDTYNFFKKVAGYDTLRMILCKKAILCEGDSDELVIQKAYM 417 Query: 399 QC--GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 Q G +GI+VI ++ A + + V+ D D + + Sbjct: 418 QLNDGRLPIEDGIEVISV-GVSFLRFLELADCIRTKIAVVTDNDGDMAAINKKYENYMGA 476 Query: 457 DR------EAEREHLTALPALDMEHFMYRQGFSDVFH-----RMAQIPENVPMNLRKIIS 505 ++ + T + + Y + ++ +I + + Sbjct: 477 NQKDYIKICVDDVVDTGTLKIGNNDYNYNTLEPKLLKANGLDKLNRIFGTDYTDEDDL-- 534 Query: 506 KAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSR 542 + + +K + +++ + +P + + Sbjct: 535 RKFMKHNKTECGLKIFESTEQI---EIPEYILEAIRW 568 >UniRef50_Q0HJ47 ATP-dependent endonuclease of the OLD family-like protein n=4 Tax=Proteobacteria RepID=Q0HJ47_SHESM Length = 589 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 80/594 (13%), Positives = 171/594 (28%), Gaps = 92/594 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E + I +R + L + V+IG+N GKS+LL ++ DF Sbjct: 1 MKIESIWIKNWRSVKEEKLRAQDLMVIIGQNNHGKSNLLSSVLFFFGEVKQQ----DLDF 56 Query: 61 WFPPGDINGREHHLHII----LTFRESLPGRHRV-------------------------- 90 + ++ + TF++ L ++ Sbjct: 57 YHGSTELFVEIEFGDLDESDKTTFKKYLTSEGKIVVRKTAFLGGSFEYRGYIENPSEDWL 116 Query: 91 -------------RRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHP 137 P + + E + SF + + Sbjct: 117 QEANASAYTNRELASSLPFHPYIPDSGRITKQNIIDAQNEYIQTNMGNIQFSFELETTNF 176 Query: 138 IDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV-------------PNVPNVEVTAR 184 + ++ + + + +++A ++ +V + + T Sbjct: 177 LGLKSVAKGI--FGEVYFIPAVKEASDDFSSKDSSVFGKMYADVVALMSEHNNEWKETKE 234 Query: 185 QLDFLARELSS-HPQNLSDGQIRQGLSAMVQLLEHYF---SEQGAGQARYRLMRRRASNE 240 +L L L+ + + + L+ + L + + + Sbjct: 235 KLGKLFSTLNKKDREGNENNDRPKQLTDFEKELTDELIAWGAKVDIEVSNPDIESVFKAN 294 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP--------LLLI 292 + W D + I R G R + + L + + + + + Sbjct: 295 TQVWVD-DGVRTDIKRKGHGLQRALTVALIQVVAKKAFAEAELAEEQGNRKASNSRYFIF 353 Query: 293 EDPETRLHPIMLSVAWH---LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRES--SRVA 347 E+PE LHP + L+ Q I T+S L+ + + + + + Sbjct: 354 EEPELYLHPQAQRSLFDSFVALSESGSQVILCTHSSGLIDVERYKSIYIATKNDELNGTK 413 Query: 348 AWRLGPSGLSTEDS--RRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 + + +S+ I +R FA +L+EG TE V LA++ G Sbjct: 414 VKQCTEDLFEGDSKKDFNLSYWINPDRGELFFASKVVLLEGATEKTVFPLLAKELGVF-- 471 Query: 406 AEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKK-----YAATVRSLLNNDRE 459 +I+ P VK + I + + D D K +A + D Sbjct: 472 KYEYTLIDCGSKDNIPLYVKLMNKFSIPYVAVYDRDHQAHKGVDAIASADRSTQKIVDEI 531 Query: 460 AEREHLTALPALDMEHF--MYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRS 511 + + D+E + G S + ++ I ++ K Sbjct: 532 DVNIGSSVVLENDIEEELGLPNGGSSKPYVALSHITAEGFTVTPQMEQKIRKIY 585 >UniRef50_A6Y4R5 Putative uncharacterized protein n=1 Tax=Vibrio cholerae RC385 RepID=A6Y4R5_VIBCH Length = 548 Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 85/565 (15%), Positives = 182/565 (32%), Gaps = 39/565 (6%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L + I F+GI + ++++ +LIG N KS++LDA S S+ D Sbjct: 1 MKLSALLIENFKGIKSEVKVLIDNVVILIGPNNCRKSTVLDAYEAYFSVGSE---LSVDF 57 Query: 60 FWFPPGDINGREHHLHIILTFRESL--------PGRHRVRRYRPLEACWTPCTDGYHRIF 111 F + + ++ + + W+ + + Sbjct: 58 FHNQNDSLPISITGIFTDISSDDLDSIGQEWLITADPEFGDCAKFKFVWSKADEKAKKFS 117 Query: 112 YRLEGESAEDGSVMTLRSFLDKD-GHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRN 170 + + + + G + L PI + ++ + ++ A +++ ++ Sbjct: 118 FSNKINAFKPGGGGGWNTILSSRLPMPIRINPTDNTEALEQVVKELISKNAAAKVKQDKS 177 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + ++ A++++ S ++ + M E + +A Sbjct: 178 KVAKIMAEIDALAKEVEAELSSEISSISTSIQTEVDKMFKGMKVTFEAGVGKFDPEKAIK 237 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATL----LQAKGTLRLDKDA 286 R N + + + G R L TL L KG + D Sbjct: 238 EGSRFIFEN--------NGSSAPLANQGSGVQRSFLWAAIKTLSSQGLLKKGRTAIAADK 289 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVE-HVCRLVR 341 +LLI++PE +HP ++ A + L Q I TT+S + LT + ++ Sbjct: 290 PKVLLIDEPEINMHPAVIRSACEAIYALAELDGWQVICTTHSPVFIDLTKDHTTLIKVSN 349 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHIR--FNRPSSLFARCWLLVEGETETWVINELARQ 399 + V ++ S S ++ + F R F LLVEG+TE + ++ Sbjct: 350 LVNDVLYYQTDKSAFSPDEKDNLKFLNRCCPTVNEFFFYDTSLLVEGDTEYLAYQDQIKR 409 Query: 400 CGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDR 458 VI P +K + G + + D D N++ Sbjct: 410 HNLGMTH---CVINCRGKANIPTFIKIFDQFGAKAVAIHDLDTKLNSDGKKNAMWTINEK 466 Query: 459 EAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAI 518 T + ++ F + + + R I + + + D Sbjct: 467 IRIAADATNGRVQTL---VHVPDFEGDYLDESPQKDKPYNLFRHITASDFESNPRYDRLR 523 Query: 519 EVAMEAGRRGVDSVPTLLKKMFSRV 543 M+ + T + ++ +++ Sbjct: 524 SSLMDIESGCHTGLYTQVAELEAKI 548 >UniRef50_A6AH64 Putative uncharacterized protein n=1 Tax=Vibrio cholerae 623-39 RepID=A6AH64_VIBCH Length = 283 Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 123/235 (52%), Gaps = 4/235 (1%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M LER+EI GFRGI RLSL ++ LIGEN WGKSSLLDAL+++L + LY F DF Sbjct: 1 MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + + +L IIL F S + RYR L+ W G +I YR+ + Sbjct: 61 HVDYSIADAQTQNLQIILVFAASDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 120 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 + T +FLD +G+ + + A+ L+ L PV+RL+D+R + VE Sbjct: 121 -YDISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSRRFEKSLANGNGKNARVE 179 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 +++ R L + P +++ G+IR LSAM L+EHYFS + + R R Sbjct: 180 ---KRISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFSFKSQSRKNPRRERD 231 >UniRef50_A4J2V4 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2V4_DESRM Length = 591 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 85/529 (16%), Positives = 165/529 (31%), Gaps = 81/529 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L +VEI FR + + L + +IG N +GKSS+L A+ LLS + D+ + DDF Sbjct: 1 MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDV--IKPDDF 58 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYR-------------------------- 94 P R + I F + P R ++ Sbjct: 59 RLLP--DGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIET 116 Query: 95 PLEACWTPCTDGYHRIFYRLEG--------------ESAEDGSVMTLRSFL-------DK 133 L + + L G + E+ + F D Sbjct: 117 FLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDM 176 Query: 134 DGHPIDVEDIN----DQARHLVRLMPVLRLRDARFMRRIRN----------GTVPNVPNV 179 + P ++ + L RL+ + ++ + + + ++ Sbjct: 177 EAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILAD 236 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGL-SAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 A+ + EL +D + + L S + ++ F G Sbjct: 237 NQLAKDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEIL 296 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 + S +N R G R + + + K ++ E+PE Sbjct: 297 KPKYSVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPL-IIAFEEPEIY 355 Query: 299 LHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLT-PVEHVCRLVRESSRV-------AA 348 LHP ++ + L Q I+TT+S ++ L+ + + ++ + + Sbjct: 356 LHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVS 415 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE- 407 L + ++ FA L+VEG++E I E Sbjct: 416 EALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEI 475 Query: 408 --GIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 ++ + + LVK+ + + I V+ D D + A + + Sbjct: 476 KSTFQITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHI 524 >UniRef50_D2LK58 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK58_RHOVA Length = 543 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 82/574 (14%), Positives = 168/574 (29%), Gaps = 63/574 (10%) Query: 1 MILERVEIVGFRGINR-LSLMLEQ-NNVLIGENAWGKSSLLDALTLL------------- 45 M +E+V+I F+ + +Q N+++G N GKS+LL+A+ L Sbjct: 1 MYIEKVKIKNFKCFEGWFEVDFDQGVNIIVGNNEAGKSTLLEAIHLCLTGMLNGKYLRNE 60 Query: 46 LSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTD 105 LSP + ER + + I L +R + D Sbjct: 61 LSPYLFNRNIERAYLDSLATKAPLQPPEIQIELFLDGEDDALEELR-----GNGNSEKND 115 Query: 106 GYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 + + +E + DG+ L + ++IN ++ R Sbjct: 116 KARGLLFSIEFDKKYDGAYTEL----------LKGKEINSIPLEFYQVQWSEFSRQPAMA 165 Query: 166 RR--IRNGTVPNVPNVEVTARQ--LDFLARELSSHPQNLSDGQIRQGLSAMVQ------L 215 R I++ + + + + + RE + ++ Q + L + Sbjct: 166 RTIPIKSALIDSTSTRVQSGSDMYISRIVREFLDDKERVAISQAHRKLKDAFKADGNVGA 225 Query: 216 LEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQ 275 + +E + + S+ L + ++ L Sbjct: 226 INERLAEAAKISRKKVSISVDMSSHNAWESSLMTYIEDVPFHYIGKGEQCIVKTRLALSS 285 Query: 276 AKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPV 333 K + +LLIE+PE L L+ ++ Q I TT+S + + + Sbjct: 286 KKNSEA------TVLLIEEPENHLSHSKLNQLISDISTDNSGKQVIITTHSSFVANKLGL 339 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393 +H+ L RE+ L S ++ + ++ +LVEG+ + V+ Sbjct: 340 DHLILL-REAKVTRIKDLDASDFFH-------KLPGYDTLRLVLSQKSILVEGDADELVV 391 Query: 394 -NELARQCGHHFD-AEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 G + I VI ++ A + I V D D Sbjct: 392 QRAYMDANGGKLPIDDEIDVISV-GLSFLRFLELATALKIPVVVATDNDGDTAALEKKYA 450 Query: 452 SLLNNDREAEREHLTALPALDME---HFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAI 508 + + D+ + + + K + Sbjct: 451 KYKDVNHITICYDPVVDKG-DLVLGGKPFNYNTLEPKLVKSNSVETFNTLFSTKHDLDNL 509 Query: 509 HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSR 542 HR K + + + P + ++ Sbjct: 510 HRYMKNNKTECALAIFSAKIKITYPKYILDAIAK 543 >UniRef50_Q60291 Uncharacterized protein MJECL35 n=1 Tax=Methanocaldococcus jannaschii RepID=Y3535_METJA Length = 630 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 82/589 (13%), Positives = 196/589 (33%), Gaps = 53/589 (8%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +E+V+I FR I L++ + VLIG+N+ GK+S+L+ + ++ + Sbjct: 1 MKIEQVKIENFRSIYDLTVEFGKVTVLIGKNSSGKTSILNVIRIIFENLDTNS--TEKNL 58 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC-------TDGYHRIFYR 113 + + L F ++ + + + + Sbjct: 59 NITTITEQNLKDQIR-RLWFYTYQNYPIKLAVWLNFDEGEGDKLREVCGLESNVKKAYIE 117 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF--------M 165 + ES + + L++ + + + + + + + + Sbjct: 118 VSIESNNNQIIWKLQNVIIFGYVSETSKIAKEALKKMKEIHSKVTGHNIESKTGDSLVPC 177 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ--NLSDGQIRQGL------SAMVQLLE 217 + +GT+ N + + +++ P+ + + I+ S ++ +++ Sbjct: 178 VIVESGTIKNKDVFNIFIDLIKNKICYVNTFPEIYKMVNIPIKGLFAHPMVSSELINVIK 237 Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + + + Y +R ++ D + G S L G ++ Sbjct: 238 NTIKDFARLRMLYDCLR-EIKGSVDTYEQPDRTEILTKSYEGMSLNYELFGSGDQIIDGI 296 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL----LPLQRIATTNSGELLSLTPV 333 + K + LIE+PE LHP + +L L +Q I T+S + ++ Sbjct: 297 LASIISKGKHHIFLIEEPEIHLHPAYIRRLARVLEDLANNLNVQLIIVTHSPDFIATLKD 356 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRR----------ISFHIRFNRPSSLFARCWLL 383 + VR+ S + P+ L ++ + LF+ +L Sbjct: 357 KRFVIGVRKDSIKINFEGYPTELLATRIFYPFRGSRLSESLARDLGVVPGYFLFSDVAIL 416 Query: 384 VEGETETWVINELARQC---GHHFDAEGIKVIEFAQSGLKPLVKFARR-MGIEWHVLVDG 439 VEG ++ ++ + +I +AQ LK ++K + GI+ ++ D Sbjct: 417 VEGNSDRIILQGYIDLLIEQLKNLPKFSYIIIPYAQRSLKEMIKVFKEDYGIKVFLIADN 476 Query: 440 DEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMN 499 DE G K + + E + + D+ ++ + F + + Sbjct: 477 DEEGLKNVKIAKDM----GLRENFEVFIIEKKDILGYIKPEDFILALDELLRECLKD-KY 531 Query: 500 LRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 + + I I++ + LL K+ ++ + + Sbjct: 532 EEVLQDEEIKSIID---EIKIFGACKNEEGKNEKDLLHKLSGKLFTVLK 577 >UniRef50_B6B531 RecF/RecN/SMC N terminal domain protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B531_9RHOB Length = 687 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 83/573 (14%), Positives = 169/573 (29%), Gaps = 68/573 (11%) Query: 3 LERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWF 62 L + + GF+ + L +L+G N GKSS+L A+ S + + + Sbjct: 127 LTGITVRGFKAAKEAKIPLGDVTILVGPNGCGKSSVLQAVHWAARAASYVLPKNQKEMIS 186 Query: 63 PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDG 122 L E G + +E + +DG +I ++ +A + Sbjct: 187 FERLDYIPSSEPLKTLHNGELKTG----AKSEAVEVYFQHGSDGEEQIQATVKIRAARNK 242 Query: 123 SVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVT 182 +T V + + + +P L + + T+ + Sbjct: 243 GGITAY-----MEGGSAVTPYKQRYQFITAYIPGLA-GLSESEAILAQPTLRRQASSGDA 296 Query: 183 ARQLDFLARELSSH-PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 L + L + + G + L + +L+ + R Sbjct: 297 GGVLRNILYNLGTDSNDDKEVGTGKARLKTLNRLVASVHP--NSSIDVSFDEREDFHISA 354 Query: 242 RSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHP 301 R ++ +V+ + + L + K L+LI++P+ LHP Sbjct: 355 SIKDIETGSVRPLETAATGILQVVQIFAYLILFKPK-----------LMLIDEPDAHLHP 403 Query: 302 IMLSVAWHLL----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS 357 L Q + TT+S ++ + V +LV Sbjct: 404 DKQERLIEALELASKEFETQIVLTTHSPNIVRAASL--VSKLVWMKDGTVQTE------D 455 Query: 358 TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS 417 E RR+ ++ F VE E + + + RQ + + V Sbjct: 456 DEAIRRLLGWGGLDKSILFF------VEDEDDKP-LRAILRQ--WPTISTQVAVCRCFGI 506 Query: 418 GLKPLVKFAR------RMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 P KF + + ++ + DGD + A + + D + Sbjct: 507 DNLPRDKFLKGLLVDGELKVKAAIHRDGDFMTDEEANKWKDNFSTDGV----YPWVTAGS 562 Query: 472 DMEHFMYRQGFSDVFHRMAQIPENV-PMNLRKIISKA----IHRSSK------PDLAIEV 520 D+E + + + ++++ I KA + K PD Sbjct: 563 DLEGYFCSAKYLAALYNVSEVEAEEWRSKAAANIGKAKDHFFEKRKKIVYALWPDGGSPS 622 Query: 521 AMEAGRRGVDSVPTLL--KKMFSRVLWLARGRA 551 A E P + KK+ + + + + Sbjct: 623 AQELWDAAGGKSPGTVKGKKLHKALKQIVKSQG 655 >UniRef50_C1M6V5 SMC domain-containing protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M6V5_9ENTR Length = 534 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 74/571 (12%), Positives = 165/571 (28%), Gaps = 65/571 (11%) Query: 2 ILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLL-------------S 47 ++++++I G+R +L L + N+++G N GKS+L++A+ L L + Sbjct: 1 MIKKIKISGYRIYKQLILEPNSKLNLIVGGNEVGKSTLMEAIALALTGRINGKGANDELN 60 Query: 48 PESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 P D N + I L F + ++ T+ Sbjct: 61 PYWFNTELVADFVERRQRGENISLPEIKIELFFDNTPELQNICGAI-----NSDHPTNAC 115 Query: 108 HRIFYRLEGESAEDGSVMTLR----SFLDKDGHPIDVED--INDQARHLVRLMPVLRLRD 161 + + + S + + L + + I+ +L + Sbjct: 116 PGVLFHVLPNSEYNEEIEQWLISPTKILPVEFYRIEWRSFADEKLLNRPRQLTTAIIDSK 175 Query: 162 ARFMRRIRNGTVPNVPNVE---VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH 218 + + + N + ++ R++ + G I + +S + L Sbjct: 176 TVRSSTSIDYHLRQIINDHLAPIERAKISLSYRQVKASMAGGVLGDINERISKLNASLHD 235 Query: 219 YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG 278 + M + + + G I + L Sbjct: 236 --------KTIILDMDQSSRTSWEGVVSPHVNEVPFSMSGQGQQAAIKISLSMGR----- 282 Query: 279 TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEH 335 + ++IE+PE L LS + L Q TT+S +L+ ++ Sbjct: 283 ----HAEKTKFVMIEEPENHLSHTSLSTLLSRIEKLSSTSQQLFITTHSTFVLNRLGLDS 338 Query: 336 VCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE 395 + + ES +GLS + ++ + A+ +LVEG ++ + Sbjct: 339 LILIGNES------VSRINGLSPDTVSYFQKLPGYDTLRMVLAKKVVLVEGPSDEIIFER 392 Query: 396 LAR-QCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 + GI VI L ++ + L D D + A Sbjct: 393 FFKDTYQLRPMEVGIDVISMRGLSLAKCLELCAALDRPVASLRDNDGISPEDLALPVQGW 452 Query: 455 NNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKP 514 E + + +E + + + I + + K Sbjct: 453 LKKNRRELFIGSVVTGTTLEPQLIHHNGEKLLREVLNIEDRADLLT-------WMSREKT 505 Query: 515 DLAIEVAMEAGRRGVDSVPTLLKKMFSRVLW 545 + A+ +++ P + + Sbjct: 506 EGALRISVSKKALTP---PKYMSDAIRFIYE 533 >UniRef50_Q7N8W7 Similar to unknown protein n=10 Tax=Bacteria RepID=Q7N8W7_PHOLL Length = 522 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 88/553 (15%), Positives = 180/553 (32%), Gaps = 44/553 (7%) Query: 3 LERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 + R+ + F+ L L + N+L+G N GKSS+L A+ + L+ + Sbjct: 4 IRRLVLKNFKRFKNLELEFDPELNILVGGNEAGKSSVLQAIDIALNASRSKVESLGLETL 63 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 F I+ I+ E L + E + + +L + + Sbjct: 64 FNMECISEFLKGERKIVELPELLIEVYLDGIEGHHELDGRNNSKSIDHLGIKLVCKPVDK 123 Query: 122 GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEV 181 + +++ L + E + + + + + + + E Sbjct: 124 YT-QEIQTILAERHDNFPFEYYSIRFLTFTDETILPYKKPLQHLLIDSSQINSEYATREY 182 Query: 182 TAR----QLDFLARELSSHPQNLSDGQIRQG-LSAMVQLLEHYFSEQGAGQARYRLMRRR 236 T + R S + + ++ M L+ Y +R Sbjct: 183 TRTMYTTHASVVERNHHSFEYRKAKSEFKRVVFKTMNDALDIY----------KFDVRTS 232 Query: 237 ASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPE 296 + + + ID G I + + LR + +LL+E+PE Sbjct: 233 PKASVETDIIITEGDIPIDSKGKGRQCFI---------KTEFALRNREHVLDILLLEEPE 283 Query: 297 TRLHPIMLSVAWHLLN-LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSG 355 L + + + + Q T+S + + ++ V L E+ + Sbjct: 284 NHLSHVHMHKLIDRIRGSVKKQLFIATHSSLIATRLNLKKVLILSEEN---LSQPTSLKD 340 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--GHHFDAEGIKVIE 413 LS + N + +LVEG+ E +++ L + C G D +GI VI Sbjct: 341 LSQSTANFFMKAPDNNVLELALCKKAILVEGDAEFILMDALYKNCTGGASTDTDGIYVIS 400 Query: 414 FAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 + K ++ A+ +GI+ + D D K T + L +D + Sbjct: 401 VDGTSFKRYLELAKLLGIKVAAIRDNDGDYKSNCVTNYADLISD-SVQIFADADDARYTF 459 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIIS-KAIHRSSKPDLAIEVAMEAGRRGVDSV 532 E +Y+ I E RK ++ + +K + A E+ + G V Sbjct: 460 EVCIYQDN--------TTICEGQFAAGRKKLTVEEYMLKNKTEAAFELLEQKGTELVA-- 509 Query: 533 PTLLKKMFSRVLW 545 P +++ + + Sbjct: 510 PNYIQQAITWIRE 522 >UniRef50_A5LKV6 Putative uncharacterized protein n=1 Tax=Streptococcus pneumoniae SP6-BS73 RepID=A5LKV6_STRPN Length = 585 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 74/484 (15%), Positives = 161/484 (33%), Gaps = 22/484 (4%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M +++ I FR + + + L NV+ G N GK++LL A+ LL F + D+ Sbjct: 1 MEFKKLVIENFRNFSSIEVALSNKNVIFGMNDSGKTNLLFAIRYLLDRTIRNKGFIKSDY 60 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP------CTDGYHRIFYRL 114 R + + L + F L Sbjct: 61 HR---HDTSRPIKIQLELDLSDRKMEGDEESLKSSHSRLLISTVAGARNNSSLDTFFISL 117 Query: 115 EGESAED---GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPV-LRLRDARFMRRIRN 170 E E G+ + + + + +++ V + F +R R Sbjct: 118 EAVYNEKELFGNPVLSWGSTLDNLVEVPQYGTRSDIDKIFQIVYVNPAIELDSFFKRNRR 177 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + + + + + + +N+S+ + + + + + ++ Sbjct: 178 ILFSDDSKTDEDVKLEEEIENNIEKLNENISNLHLITSVQSQLTEAYKSYRKENLEIKIQ 237 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 + + + Y++ + + P R LL L ++ + Sbjct: 238 SEISISGYLDNLT-PYINWNDDTHNYPTSGDGRKKLLSYAINHLISEKQ---YNKKVIIY 293 Query: 291 LIEDPETRLHPIMLSVAWHLL--NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAA 348 LIE+PE LH + L + TT+S E+L + ++ + Sbjct: 294 LIEEPENSLHRSVQISLSKQLFVQNIYEYFFLTTHSAEVLYEMDNTQLIKITNQQDATGQ 353 Query: 349 WRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEG 408 + + + + S+F LLVEG +E ++ + + +F+A+G Sbjct: 354 ---SVYYTVPNEFSNLKKKLNKSLAQSIFYDRILLVEGPSEYYLFSAIFEYVSPNFEADG 410 Query: 409 IKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTAL 468 +++ KP + + +GI++ + D D + V S + +R + +A Sbjct: 411 KYLLQVDGINFKPYSELYKALGIDFWIKTDNDLKASRGDKHVFSPIGLNRCIDLLDHSAT 470 Query: 469 PALD 472 P LD Sbjct: 471 PILD 474 >UniRef50_A3XJ07 Putative uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XJ07_9FLAO Length = 626 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 90/623 (14%), Positives = 192/623 (30%), Gaps = 85/623 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS---PESDLYHFER 57 M + ++EI+ +R ++ L+ +IGEN GKS+LLD+L L+ S + Sbjct: 1 MYVSQLEILNYRNFKNFTVQLKPVTQIIGENNIGKSNLLDSLGLIFSQEVSFFKRRMLDI 60 Query: 58 DDFWFPPG--------DINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 DF + D + ++ ++ +++ + + Sbjct: 61 SDFNYETILELKKAILDTSIEPKNISYPKIVIKATLKDWDLKQEAVITDWMSNSDFTEAT 120 Query: 110 IFYRLEGESAEDG--SVMTLRSFLDKDGHPIDVEDINDQARHLV---------------- 151 + Y S+ D + R FL I E+ + + Sbjct: 121 LTYTFAPISSFDKIEEITLQRQFLQDYEKEIGPEEFKKIPQSEILILINFPISKYHYRIH 180 Query: 152 -----------------RLMPVLRLRDARFMR--RIRNGTVPNVPNVEVTARQLDFLARE 192 + + LRDA+ NG + V N D R Sbjct: 181 GGNQNESLANAYHLNQLKFELLDALRDAKSELSASRNNGLLFRVLNANEETDYQDLKKRL 240 Query: 193 L---SSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI 249 + + QN++ I+ +S + + + + ++ + Sbjct: 241 VGLQRAIEQNVAISGIKNRISEQLDKISLSTETSNNVVDLIFSLPNVSDLLRKLSLIYND 300 Query: 250 INRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWH 309 I+R G ++ + L + ++ R ++ +E+PE LH + + Sbjct: 301 NPIKIERNGTGRNNLLFISLILSFIE--DPERAQSTFFRIVGLEEPEAHLHANLQNHLAS 358 Query: 310 LLN----------LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL----GPSG 355 L +Q I T++S + + ++ L ++ V A + G + Sbjct: 359 NLEGLIKKEDGTYRKDIQLILTSHSNHITTKIDFDNTVVLHYKNGNVQAHYILDGFGTTA 418 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR-QCGHHFDAEGIKVIEF 414 + ++ + ++R LVEG +E + + Q G D V+ Sbjct: 419 EEKRQVNYLKKYLDSENVNLFYSRRLALVEGISEKLLFPLFYKIQTGETIDQSATAVVNV 478 Query: 415 AQSGLKPLVKFA-RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 K ++ + VL D D G + + L N + Sbjct: 479 NGLAFKNFLQIIVNGFHTKCLVLTDSDI-GTQSENRAQELKNKYDGVNEIDIQISQLSTF 537 Query: 474 EHFMYRQGFSDVFHRM-------------AQIPENVPMNLRKIISK-AIHRSSKPDLAIE 519 E + S + + E + N I A+ K + A++ Sbjct: 538 EKDLINCNKSGSGKTILCKVIPIVRPNAGKKYVEELGTNDIDIEEYFALIEDYKSEFALQ 597 Query: 520 VAMEA-GRRGVDSVPTLLKKMFS 541 +++ + S+P ++ Sbjct: 598 LSLSLTEDQSGFSIPKYIEDGIK 620 >UniRef50_B2KB28 ATP-dependent endonuclease of the OLD family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB28_ELUMP Length = 578 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 84/542 (15%), Positives = 161/542 (29%), Gaps = 70/542 (12%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ V I FR I LE ++L GEN GK++ ++AL + + +DF Sbjct: 1 MKIKNVHIHNFRSILDADFPLESYSILAGENNSGKTTFINALRVFYEDIKFN---KAEDF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 + I E + R + I Sbjct: 58 PKMETSDVESWIEVEFITVQEEQDLLKEEYRSADKILRVRKYLASSSIEIKSTQSNIYGY 117 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM-RRIRNGTVPNVPNV 179 + V++ F L R V+ L A + I + + Sbjct: 118 ENGVLSTTLFYGAKNISQAKLGNILYIPELSRTEEVMNLSKAASPLKSIVEYVLGKILKA 177 Query: 180 EVTARQLDFLARELSSHPQNLSDGQ---IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + +L+ + Q S + I + + L+ + G Sbjct: 178 SSSFSELNKAFEVFNKEFQAESSPEGLSINKMKEDINSELKDWGVSLGININAVSPEVIT 237 Query: 237 ASNEQRSWRYLDIINRMIDRP--GGRSYRVILLGLFATLLQAKGTLRLDK----DARPLL 290 + + + + I+ G R I+ L + + + K L+ Sbjct: 238 KNLLSHYLQDSKLGEQEINTSSVGQGLQRHIIYSLIKIASKYQDPKEIKKKDFSPDFTLI 297 Query: 291 LIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELL--SLTPVEHVCRLVRES- 343 L E+PE LHP + L + Q IATT+S + ++ + + RL RE Sbjct: 298 LFEEPEAFLHPSQQQILNIDLESIAKGDNEQVIATTHSPIFVSKNINNLPSLIRLSREER 357 Query: 344 --SRVAAWRLGPSGLS-------------------------------------------- 357 ++ + L Sbjct: 358 NKWETKSFNISKEKLELLLSDNAGLEACFKSTVALPACQEELKKALAKSLASGTLEGFSG 417 Query: 358 -TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ 416 ++ I + R ++ F++ ++ EG TE ++ L F + I ++ Sbjct: 418 SDKEIMNICMWLDTERANAFFSKHVIICEGATEKVLLEYLFATHWKDFAKKHIYCLDSLG 477 Query: 417 S-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEH 475 + + +GI V+ D D + V + + + A ++L AL D+E Sbjct: 478 KFNIHRFINLFDSLGIYHSVVYDSDN-NRGVHEIVNKFIQSKKSAYTQNLLALSG-DVES 535 Query: 476 FM 477 Sbjct: 536 EF 537 >UniRef50_A7JZX6 Pathogenesis related protein n=4 Tax=cellular organisms RepID=A7JZX6_VIBSE Length = 714 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 94/594 (15%), Positives = 187/594 (31%), Gaps = 92/594 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + R+EI FR + +L L ++ +++IG+N GK+S+L L L+ +SD +D Sbjct: 1 MKVARIEISNFRLLKSFTLDLEDELSLVIGKNNTGKTSVLACLDK-LAVQSDKKAISYED 59 Query: 60 FWFPPGDI-------------NGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 F L I L + + L P D Sbjct: 60 FNVDLMSSIEAVLLGEQTIGNEEEYSPLGIQLKLFIKYSESDDLSKISSLIMSLDPVDDN 119 Query: 107 YHRIF---------YRLEGESAEDGSVMTL--RSFLDK------------------DGHP 137 F L+ D R FL + + Sbjct: 120 VVLSFEYKIAFDKIVDLKAAYENDAEKFENSPRLFLKENLSDYFGPVVKKSLLKGDESQF 179 Query: 138 IDVEDINDQARHLVRLMPVLRLR---DARFMRRIRNGTVPNVPNVEVTARQLD---FLAR 191 ID+ N + ++ + + R + + + + N T V+ + Q+D + Sbjct: 180 IDLNKENINLKDILSIQFINAKRSVTNKQNDKTLSNQTSSLYKQVDESDEQVDASNEFKK 239 Query: 192 ELSSHPQNLS---DGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLD 248 EL LS + + + + ++ A R Sbjct: 240 ELRKTDTKLSGIYQNMFKDVIEKVNRFGGISPTDTTIKVASTLQHRELLEGNTTVMYQHQ 299 Query: 249 IINRMIDRPGGRSYRVILLGLFATLLQA--KGTLRLDKDARPLLLIEDPETRLHPIMLSV 306 + G +I + +L + + +L+ LL IE+PE HP M V Sbjct: 300 SHDLPEHYNGLGYMNLISMIFEIEMLMSRLRKSLKEQPATINLLFIEEPEAHTHPQMQYV 359 Query: 307 AWHLLNLL-------------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 + L LQ I TT+S ++S + + + L +E Sbjct: 360 FIKNIKKLLKENRIREDGIEIHLQSIITTHSSHIVSESSFDDIKYLKKEPQSHQVQAKNL 419 Query: 354 SGLS---------------TEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L + R + ++ NR FA + +EG+TE ++ + + Sbjct: 420 KDLELEYSSKEDPEKDAELKQSYRFLKQYLTLNRAELFFADKAIFIEGDTERVILPAMMK 479 Query: 399 QCG--------HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV 450 + ++ I +IE + + KF +G++ ++ D D + Sbjct: 480 KIDQENEVDNMQPLLSQNISMIEV-GAHSQTFEKFIDFIGLKSLIITDIDSNKEVPKDDD 538 Query: 451 RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKII 504 + ++ E + + F + D + ++ +++ K + Sbjct: 539 PTKTKREKCRPNETGASQTSNSSLEFFFGTKELDFYKTLSFSGKSLSKCPEKKL 592 >UniRef50_A1B1Z6 Putative uncharacterized protein n=2 Tax=Rhodobacterales RepID=A1B1Z6_PARDP Length = 744 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 85/570 (14%), Positives = 156/570 (27%), Gaps = 128/570 (22%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDL--YHFER 57 M L R+E+ FR + R L + ++ +L+G N GK+S + AL L + Sbjct: 1 MKLRRIEVFNFRKLRRARLDMSDKQTLLVGANNSGKTSAMKALRKFLKDRGGIDTRDVTA 60 Query: 58 DDFWFPPGDINGREHHLHIILT-------FRESLPGRHRVRRYRPLEACW--TPCTDGYH 108 ++ + + L+ F + + T G Sbjct: 61 SNWAAIEQIAGAWTQEVEVDLSPLLAQLPFIDVWL-HADTSELHHVAHLIPTLTWTGGLL 119 Query: 109 RIFYRLEGESAEDGS--------------------------VMTLRSFLDKDGHPIDVED 142 + RLE + D R FLDK + + Sbjct: 120 GVRLRLEPKRGADIKAQYLAAREAAQTLQPGGATAKGFALWPRDFREFLDKRLRDLFELN 179 Query: 143 IN------------------DQARHLVRLMP---VLRLRDARFMRRIRNGTVPNVPNVEV 181 + + P ++ +R+ R + N + E Sbjct: 180 AHILDPMSFTTTGPVEPQALPALSEGIGSNPFAGLIHIREINAQRGFADAGDSNGDDDEP 239 Query: 182 TARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQ 241 T +A ++ + + D + + + + LE + AR + A E Sbjct: 240 TNATSRKIASQIQPYFRKHIDPEKDPTPNDV-KALEAIHDAETTFNARLKDGFADAIKEL 298 Query: 242 RSWRYLDIINR----------------------------------MIDRPGGRSYRVILL 267 S Y +N G +I + Sbjct: 299 ESLGYPGGLNNPKLFIATQIKPVDGLDHPAAVQYDISGDTSGVKLPESYNGLGFQNLISM 358 Query: 268 GLFATLL------------QAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAW----HLL 311 Q + L+LIE+PE LH + V +L Sbjct: 359 VFQLMRFRDDWMQVGKFKSQLVTPDDKGIEPLQLVLIEEPEAHLHVQVQQVFMARAHKVL 418 Query: 312 NLLP----------LQRIATTNSGELLSLTPVEHVCRLVRE--SSRVAAWR-----LGPS 354 Q + +T+SG + E + RE S V G Sbjct: 419 RNHKDLEKEGSAFTTQLVVSTHSGHIAHAAAFEELRYFKRELPSQGVVPTASVANMTGLF 478 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEF 414 G E R ++ ++ FA +++EG E ++ L + A + +E Sbjct: 479 GADNETHRFVTRYLLSTHFDLFFADAIIVIEGAAERILLPHLIQHHYPDLAAAYLSFLEL 538 Query: 415 AQSGLKPLVKFARRMGIEWHVLVDGDEAGK 444 S L + + ++ D D + Sbjct: 539 GGSHAHRLRPLIEALEVPTLIITDLDAVAE 568 >UniRef50_Q1D0Z7 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D0Z7_MYXXD Length = 646 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 91/633 (14%), Positives = 186/633 (29%), Gaps = 96/633 (15%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 +L +V + FRG + + ++ NVL+G N GK++L+ A+ + S + R + Sbjct: 1 MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREF 60 Query: 62 FPPGDINGREHHLHII-LTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 ++ ++ I L F + +R+E +E Sbjct: 61 REFQSQC-KDDYIRIDPLVFLGLKTLLWISVEELSELYFDPDDS-------FRIELHFSE 112 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRN--------GT 172 + + +D G+ + L R R + +R Sbjct: 113 ESLIGHFILNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELLRENEPVAVFIPI 172 Query: 173 VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 P E + + + + A + L E Sbjct: 173 FPGAGPNEEYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFT 232 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 + + Y ++ + L+ +F+ L + + ++ + LL+ Sbjct: 233 SKSDFDRVENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPV--FLLL 290 Query: 293 EDPETRLHPIMLSV----AWHLLNLLPLQRIATTNSGELLSL-TPVEHVCRLVRESSRVA 347 ++PE LHP + V L L Q T+S E ++ LV + + Sbjct: 291 DEPEAHLHPRLQGVVAMYLAELSRELGAQLFIATHSVEAINRLARRSDTSLLVVDKKATS 350 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC----GHH 403 A L G+ ++ R F+ L +R L EG ++ ++ + A Sbjct: 351 ANILASEGVLLDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCAEVYFRGQPKL 410 Query: 404 FDAEG-IKVIEFAQSGL-----------KPLVKFARRMGIEWHV--LVDGDEAGKKY--- 446 G + +G +PL+ R G H+ ++D D + Sbjct: 411 LARFGAWTFVPLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGP 470 Query: 447 --------------------------------------AATVRSLLNNDREAEREHLTAL 468 + RE + +L Sbjct: 471 FREESGFRLLDVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASL 530 Query: 469 PALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDL-------AIEVA 521 D + + + + +A+ + + + ++PD+ A V Sbjct: 531 GCADRDEQLLMEATGQLMIALARTKRDDSTLVNALEQAKSEVGARPDVWQRGRSRAKVVL 590 Query: 522 MEAGRRGVDSVPTLLKKMFSR-VLWL-ARGRAD 552 E R +P +L+ R V+ + A G D Sbjct: 591 SEIRSR----LPLMLQNCIRRDVVQMVAHGWGD 619 >UniRef50_A7WYC4 Putative uncharacterized protein n=6 Tax=Bacilli RepID=A7WYC4_STAA1 Length = 729 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 85/617 (13%), Positives = 183/617 (29%), Gaps = 99/617 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPE--SDLYHFER 57 M + ++I FR + N +IGEN GK++ L AL +LL + Sbjct: 1 MFISTLQIRNFRNYESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLKE 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPL----------EACWTPCTDGY 107 DF+ + + H + I TF + E + G Sbjct: 61 SDFFHGIQN-GWQGHWIIISATFEGISEEEFDNEICASISLNSESQTILEELISNADKGV 119 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHL----------------- 150 I + A + + + LD I Sbjct: 120 GSISLFIRPNKAIRKQLFDISTELDSHQFNEFRNSIRLSDYEFYYTSKSNLNFCINENYD 179 Query: 151 ----------------------------------VRLMPVLRLRDARFMRRIRNGTVPNV 176 + ++ V LRD + V + Sbjct: 180 KLVGRLNDNIASNPEEDDEALLGSRIDMSDIFKHISVVYVDALRDVLREMKNNRNPVKRI 239 Query: 177 ---PNVEVTARQLDFLARELSSHPQNL-SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 ++++ ++ L + + + S +IR+ + + L + L Sbjct: 240 METIESKISSDNVESLKTIIQQLNETITSVPEIRKIGENINRQLNSIIGSVYSP---NLL 296 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 + S++ S + + L ++ L + ++ ++LI Sbjct: 297 LSSTMSDDMGSLAKFLSMKPEQNIDLDLLGLGHLNMIYLALKIVEFEACRSRELLNIMLI 356 Query: 293 EDPETRLHPIMLSVAWH--LLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAW- 349 E+PE +H + + L Q + TT+S L ++ + + L + + Sbjct: 357 EEPEAHIHHHIQKTLFEGLNLQKNYTQILMTTHSVHLAEVSEISRMNVLKSFNGKSIVMN 416 Query: 350 ------RLGPSGLSTEDSRRI---SFHIRFNRPSSLFARCWLLVEGETETWVINELARQC 400 L + I ++ R LF++ +LVEG+ E +I ++ ++ Sbjct: 417 PANNLNSFAKEKLKKNNLNLINAVERYLDVKRNGLLFSKGVILVEGDAEEILIPQIVKKL 476 Query: 401 -GHHFDAEGIKVIEFAQSGLKPLVKFARRMGI--EWHVLVDGDEA------------GKK 445 G + D GI +I + + + I + ++ D DE ++ Sbjct: 477 FGINLDELGIGLINVGSTSFEYIASLFDDDRIQRKCAIVTDLDEQAIPSEHRLYKSTAQE 536 Query: 446 YAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIIS 505 + L++ E ++ ++ I ++ + + I + Sbjct: 537 KGQARKEKLSSLFNENNWVNCFYANTTFEIEFLDVNKENILTYVSPIIDDAFKDKKTITA 596 Query: 506 KAIHRSSKPDLAIEVAM 522 S+ L +AM Sbjct: 597 YKEEIQSEQYLERNLAM 613 >UniRef50_C1MEQ6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C1MEQ6_9ENTR Length = 575 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 92/600 (15%), Positives = 167/600 (27%), Gaps = 80/600 (13%) Query: 3 LERVEIVGFRGINRLSL-MLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 + + I FR + + N LIG GKS+++DA+ L+L + F DF Sbjct: 4 IRHISIQNFRAVRQAEWCPGPSLNCLIGPGDSGKSTIIDAIDLVLGARRS-FTFSDADFH 62 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH-----------RI 110 + I +T + G + Y + T H + Sbjct: 63 LMNT-----ATPICISITLGQLDDGLLNLEAYGRYFRGFNIETKEIHDEPLAGDETVLTL 117 Query: 111 FYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRN 170 +E + D + + R+ + + + + + L R+ Sbjct: 118 RMVVEDDLEPDWLLFSERTTAEGLEKRLQWKHREQLSPTRLGAASHHHLAW-----GNRS 172 Query: 171 GTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARY 230 + L L+R+ Q+ L+ + + G +A Sbjct: 173 VLNKLSDEDFNVSATLAELSRQTRQSFAARELPQLDAILTEVRTIANSLGVPVGELKALL 232 Query: 231 RLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLL 290 + SN S D N + G S R+++ GL + + Sbjct: 233 DVNGVSLSNSAISLHNND--NTPLRMLGTGSTRLLVSGLQKAV-----------GRPGTI 279 Query: 291 LIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVEHVCRLVRESSRV 346 LI++ E L P +S H L Q TT+S +L +C L + + Sbjct: 280 LIDEAEYGLEPYRISQLLHQLGSRDPEPTSQVFITTHSPYVLRELQATQLCVLRKVNQPA 339 Query: 347 AAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL-----ARQCG 401 LS ED + + + F++ ++ EG TE I L +R Sbjct: 340 PEPSHLFLTLSGEDQEQATLR---ACAEAFFSKAVIVGEGGTEVGFIRGLDLYRQSRGRT 396 Query: 402 HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS--------- 452 D + R+G +L D D + + Sbjct: 397 GFQDQGAFATDGAGGEKYFKRAEVFARLGYRTALLKDSDIISQAHRLKTEHCRARGVTIF 456 Query: 453 LLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPEN--------VPMNLRKII 504 N E L P + + + ++ Q +N I Sbjct: 457 EWGNGFSTEGALLAWCPVETIRDIVLLAAALNSQQQVDQHIQNCSQGAYNFEACTEEPTI 516 Query: 505 SK------------AIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD 552 K A ++A ++ K + +L A D Sbjct: 517 EMREPVARAAGEYGWFKTIGK---AEDLAENIVGPAINDFSRPFKAIIRDLLGWAADDGD 573 >UniRef50_B3Z268 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=B3Z268_BACCE Length = 569 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 88/588 (14%), Positives = 179/588 (30%), Gaps = 69/588 (11%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + +EI FR I L L + VL G N GK+S L A L L+ ++ Sbjct: 1 MYINSIEISNFRSIGSNPPLKLDISDITVLSGINDTGKTSALLASFLGLNSCINVGKEMD 60 Query: 58 DDFWF----------PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 D D + + L + T + V E D Sbjct: 61 KDLSKLLDGSTHRKGFSEDNSKQCIRLSLKCTKEDLEKIEDYVDENPHFEKSLKDLNDKG 120 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKD-GHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 I + D V+ + + G+ D+ H + D Sbjct: 121 IDIEREKIKQFFSDAVVLLIPPLRPELFGNFQSYVDLESWNNHAQKFF---GYDDITNFS 177 Query: 167 RIRNGTVPNVPNVEVTARQLDFLA-RELSSHPQNLSDGQIRQGLSAMV------------ 213 + V + +E++ L+ L ++ + + + + + Sbjct: 178 IMLYRLVSKLAELEISMEYLNCLYVPGVTRSNEQILIKEEDKKSQLVTFFKDVCSERGKT 237 Query: 214 ----QLLEHYFSEQGAGQARYRLMRRRASNE-----QRSWRYLDIINRMIDRPGGRSYRV 264 + YF R + + + + + + R G Y Sbjct: 238 SGKHKKFMEYFKILLPELVRIEINSTQGDERYEDIFLIWNQNGNEKEQPLSRSGDGIYNT 297 Query: 265 ILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIA 320 + L + + ++ I++PE LHP++ L+ + +Q + Sbjct: 298 MFL---------VAKVLNNFSTMNIVFIDEPEIGLHPMLQQRFIKLIRKISREFSIQWVL 348 Query: 321 TTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARC 380 T+S +L L++ + + + + + P +L A Sbjct: 349 ATHSPFILQSLKNNEKLYLIKHDGN----QTNCQDIDIANKEVVFSTLGAYLPLALSATG 404 Query: 381 WLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDG 439 + VEG+TE V+ L + G + + E I +I L + K +++ + V++D Sbjct: 405 VIFVEGQTEVAVLTILLDKVGLNIEKERILIIPLGGENLFQIAAKDLKKLHEKSMVIIDS 464 Query: 440 D-----EAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPE 494 D E G T + E E L +E+ + + + Sbjct: 465 DLLKPEEEGGSIKKTKLEYKDACAENNVEFLMIKEYRTLENMYPKNILASIL------GI 518 Query: 495 NVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSR 542 + ++K + VA + + + P L+K++ Sbjct: 519 EETTLDYGNFGEVPGITNKIKIGEAVANKMSKEEAECFP-LIKEIQKW 565 >UniRef50_D2RJW4 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJW4_ACIFE Length = 552 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 89/537 (16%), Positives = 167/537 (31%), Gaps = 85/537 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L + I +R +++ N L+GEN GKS L L+ + + + +D Sbjct: 1 MYLSSMRIQNYRNFKDITMTFHPLANYLVGENDIGKSGFLRLLSYMANA----WTLPEND 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + D + + + L +S + T H R+ E Sbjct: 57 Y-----DDPKQPIRITLDLHLLQSPNE-------------YFADTPQDHPEKIRVRLEMK 98 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 L + G + +E I + + + A + R Sbjct: 99 VTDICPHLYD--GETGQEMPLETIRRL--RYISYSAISQEDQAVRPQVYRALEKCLAQWE 154 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 L R+ H N+ + + E R++ R + Sbjct: 155 ASHCGPLPEEERQFIQHEVNV-------------GYFDSSYYEC--IFYLSRILCRSNRH 199 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + +++ + I + + + L T++ + + ++ I++PE L Sbjct: 200 RADNLKFISLAALRIITQVYQMAHSLSVPLEHTII---VDSQGKRYLPLIISIDEPEIHL 256 Query: 300 HPIMLSVAWHL---------------------LNLLPLQRIATTNSGELLSLTPVEHVCR 338 HP M L+ L Q T+S + L + ++ R Sbjct: 257 HPYMQRSILQYYQQLLNNEDPQFCALLKDLFGLDGLRGQLFVVTHSTDSL-IDDYRNILR 315 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPS---SLFARCWLLVEGETETWVINE 395 L + + G S + I H+ + P +L+AR +LVEGETE Sbjct: 316 LYHDRRGLVKAACGASFHVNRE---IEKHLIMHFPEVKEALYARSVILVEGETEYGCFQL 372 Query: 396 LARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 R G FD GI +I S + + K + L D D K+ + + Sbjct: 373 FGRTVGVPFDYYGICLINARGESSIAKIKKLLEYFRLPVVALYDADV--KEAHKREKGVY 430 Query: 455 NNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP-ENVPMNLRKIISKAIHR 510 D +D+ M ++G R+ + ++ KA H+ Sbjct: 431 FTDG--------VCFEMDLSQTMLQRGKRQALDRIIDVACGGTGRTSYDMVKKACHK 479 >UniRef50_Q5JGZ5 Predicted ATP-dependent endonuclease, OLD family n=1 Tax=Thermococcus kodakarensis RepID=Q5JGZ5_PYRKO Length = 653 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 86/620 (13%), Positives = 182/620 (29%), Gaps = 119/620 (19%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M + +E+ FR + + + L++ VLIG N GKSSLL AL L +P + + +DF Sbjct: 1 MRIVEIEVNNFRSLRAVKMPLDELTVLIGRNGAGKSSLLQALDLFFNPNAK---YSEEDF 57 Query: 61 WFPPGDINGREHHLHIIL---------TFRESLPGRHRVRRYRPLEAC------------ 99 + + + I F++ + Y + Sbjct: 58 Y---NRDTSKPIRIAIKFRLENDKEREEFQKYVINEDNDHDYIKVVKIMKFPASKSNQSY 114 Query: 100 ---------WTPCTDGYHRIFYRLEG------------------------ESAEDGSVMT 126 ++ + R +G E ++ Sbjct: 115 HGVVKSIPQFSNLPSRKEDLIERYKGLQKEFPDLPHLGSKPTKKKILEALEEYKNSHPEK 174 Query: 127 LRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV------------- 173 L +D E + + ++ + V ++ + G++ Sbjct: 175 WEETLQEDQFFGYKEVGHGKIDKFIKFLLVPAVKSVSEETEYKKGSIITELTQLIIEEHI 234 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 ++P ++ L + L +H + D + + + Q+LE + A + L Sbjct: 235 RSIPEFNRLEKRYKHLLKSLEAHRKTGKDKLFSELSNELTQILEKFAPNTQANISWGNLD 294 Query: 234 RRRASNEQRS-WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL-----------R 281 + + D +R G + R +L L + + L Sbjct: 295 DFKIPLPVPTVLVTEDGFETSAERVGHGTQRALLFSLLQYMTAKRHELNKMKNVGRDSDE 354 Query: 282 LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--------PLQRIATTNSGELLSLTPV 333 D+ LL+IE+ E HP L L +Q + +T+S L+S Sbjct: 355 KDQKLTLLLVIEELELYQHPQRQKHLHKLFKDLAGNTFGGFNIQVMYSTHSPFLISTDTF 414 Query: 334 EHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHI-------------------RFNRPS 374 + + ++ + +L + + + + + Sbjct: 415 DSLRVF-KKIKTQKSRKLRETKIYWYPQQELQKDLKRYGIDSPSKHVKKFTTTVNPVMSE 473 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKF-ARRMGIEW 433 FA +LVEGE++ + +A G + I +I G I Sbjct: 474 GFFADKVVLVEGESDRAALEVVAEHNGVDLNGNNISIIPVGGKGNILTAYLMFNGFNIPT 533 Query: 434 HVLVDGDEAGKKYAATVRS--LLNNDREAEREHL---TALPALDMEHFMYRQGFSDVFHR 488 + + D D + + S R + A+ ++E + + Sbjct: 534 YPIWDLDLYPDEMNKKLFSAVQYKTKRTPTSPIVRKNFAVFNKNLEDVIKNDLGEKNWGV 593 Query: 489 MAQIPENVPMNLRKIISKAI 508 + + + + K Sbjct: 594 LFSKLKRENLVISGKDLKNY 613 >UniRef50_B9MK32 ATP-dependent OLD family endonuclease n=2 Tax=Clostridia RepID=B9MK32_ANATD Length = 652 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 85/528 (16%), Positives = 178/528 (33%), Gaps = 61/528 (11%) Query: 1 MILERVEIVGFRGINRL-SLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + ++ I ++ +ML+ + IG+N GKS++LDA+ + ++ Sbjct: 1 MYISKMRIRNYKSFLDSGEIMLDEKIFAFIGQNNTGKSTILDAVKVFFPNYKK--QVDKK 58 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 D D E L + +F E+ R +E + D I L + Sbjct: 59 DIHRGINDSIIIEMWLGGVESFFENTRTDEVDR---QVEKLLSKADDNSLYIKLVL---N 112 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP- 177 EDG+ +R + DKDG I + LV ++P +R + ++ + Sbjct: 113 IEDGTNKNIRKYFDKDGEEIKEATLKKLLPELV-VIPAIRDPEKESTADRKSYLRSLIDI 171 Query: 178 -----NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 ++ + R S ++ + R+ ++ Q + Y++ Sbjct: 172 LDSEYKTDILIKDEGVEKRVNYSQLNDILTKEARKRCESLSQKITEYYNSTLGNNNFRIN 231 Query: 233 MRRRASNEQRSWRYL--------DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDK 284 + + + I I G V++L + T ++ ++ Sbjct: 232 LEPTVDIYSATKYNTSIVEIIGNEKIENDILNFGTGYQSVLILSILQTYVEIARSV---- 287 Query: 285 DARPLLLIEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRE 342 + + +IE+PE LHP + L + Q I T++S +S P ++V ++RE Sbjct: 288 -GKYIFVIEEPEIYLHPNLQRKMIETLINISERNQVIFTSHSPITISNLPKKNVKLVLRE 346 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 + + P + E + L ++ + VEG+ + V+ EL + Sbjct: 347 REKSIVKEINPKEVINE--------LGIKADDFLGSKGIIFVEGKDDFEVVRELICKLDD 398 Query: 403 HFDAEGIKVIEFAQSGLKPLVK-----FARRMGIEWHVLVDGDEAGK------------- 444 + I VI + I ++ D D Sbjct: 399 NLLNM-INVIPVNSCCNLKFFANAELFLNKYFEIPVVIIRDADTNDPEKLKSDFLKEMFE 457 Query: 445 --KYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMA 490 K S + ++ ++ L +E++ + F ++ Sbjct: 458 FIKQYEFADSEIVEKKKKLVQNTNILQHYSIEYYFLNELFLKDYYDYY 505 >UniRef50_B0P1G3 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1G3_9CLOT Length = 545 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 70/578 (12%), Positives = 175/578 (30%), Gaps = 69/578 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M +++V+I F+ ++ ++ N+++G+N GKS++L+A+ L L+ + Sbjct: 1 MFIDKVKIHNFKCYRDFEIIFDEGLNIVVGDNEAGKSTILEAINLALTGIIRGKSIWNEI 60 Query: 60 FWFPPGDINGRE------------HHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGY 107 + E ++ I + F + + Sbjct: 61 SQYIFNKDAVEEYIISLSTVPIALPYISIEIYFGGNEN-------PLMNGDGNSDRNSSA 113 Query: 108 HRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDI-------NDQARHLVRLMPVLRLR 160 +++ L S + PI+ DI + + L Sbjct: 114 EGFCFKIAFNEKYADEYEALLSQGNIKSLPIEYYDIIWTTFARDVITTRSIPYKSCLIDS 173 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF 220 + + + + + + +A+ + + + A+ + Sbjct: 174 SEYRYQSGSDVYLSRIIKGTLEIEDITSIAQAHRKMRDSFIN---DPSIEAINTKINQDT 230 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 S A + + + E LD I G VI L +K Sbjct: 231 SLTDKKIALSVELVTKNAWENSLVTQLDEI--PFYYVGKGEQCVIKTELALAKRTSKN-- 286 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCR 338 ++L+E+PE L L+ ++ Q + +T+S +++ + V Sbjct: 287 ------ASIILLEEPENHLSHTRLNQLIKCISKQYAEKQILISTHSSFVVNKLGLSKVML 340 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR 398 L S LS + ++ + + +L EG+++ VI + Sbjct: 341 LDN------LRITKFSELSEDTYNFFKKIAGYDTLRMILCKKAILCEGDSDELVIQKAYM 394 Query: 399 QC--GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 Q G +G++VI ++ A + + V+ D D + + Sbjct: 395 QVNDGRLPIEDGVEVISV-GVSFLRFLEIADCINTKIAVVTDNDGDMEAINKKYEKYIGQ 453 Query: 457 DREAEREHLTALPALDME---------HFMYRQGFSDVFHRMAQIPENVPMNLRKIIS-- 505 + + +++ D++ ++ Y + N + Sbjct: 454 N---QNDYIKICVDEDIDTGSLKIGNSNYNYNTLEPKLLKVNGLEKLNHVFGTKYKKEDD 510 Query: 506 -KAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSR 542 + + +K + +++ + +P + + Sbjct: 511 LRKFMKHNKTECGLKIFESSEEII---IPEYIMEAIRW 545 >UniRef50_D1B1K9 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=D1B1K9_SULD5 Length = 603 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 82/579 (14%), Positives = 164/579 (28%), Gaps = 85/579 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS-----PESDLYHF 55 M L + I GFR ++ + LIGEN GKSS+L + LLLS D Y Sbjct: 1 MKLHSLRIEGFRRFVDTTIYFDDATFLIGENNIGKSSVLKTIELLLSLEQKICPEDFYSL 60 Query: 56 ERDD---------------------------FWFPPGDINGREHHLHI------------ 76 +D F + E+ + Sbjct: 61 FHEDENQRQVDSVVLTAEFRDVPTEANSWRGFRGRIFNYTVPENSIETGLSVIYKKTFSL 120 Query: 77 -----ILTFRESLPG------------RHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 ++ F++S+ V + + + E Sbjct: 121 ATLKPVIEFKQSVKTLKSEYASAQKWQDFIVASNNEITEEMITEIFQVTSFNIKAKPEQL 180 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + + ++ ++ A L R + + + + + Sbjct: 181 DLLDEIWDIDTTAEEWFINPGGFPSNVASKLPRYLFIPAQDRMEELSTTSGVLHKTLNEL 240 Query: 180 EVTARQLD----FLARELSSHPQNLS----DGQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 R + R L+ Q L + + +L F + Sbjct: 241 FEDVRNVSPNYLEAQRHLNLLAQELDPSNTASDFYTLMQNLNGVLRGVFPDSEIHAKADL 300 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLL 291 + + I I G + R + GL + + ++ Sbjct: 301 SNPDKNIKATFDIQMKSNILTPISHQGTGTVRAAVFGLLRYRKIWEAAKDPTQRRSLIIG 360 Query: 292 IEDPETRLHPIMLSVAWHLLNLLPL---QRIATTNSGELLSLTPVEHVCRLVR---ESSR 345 E+PE LHP + L Q + TT+S ++ L+ ++ E+ Sbjct: 361 FEEPEIYLHPNAAEQMRRKIYELAGEESQIVCTTHSTYMIDLSKDKNQVLNRFSITEAEG 420 Query: 346 VAAWRLGPSG----LSTEDSRRISFHI--RFNRPSSLFARCWLLVEGETETWVINELARQ 399 S L +D + I FA +++EG+TE V+ E + Sbjct: 421 TICNPFSVSERFRDLLDDDKNHVKMLIKFDDYMSRVFFANKIIIIEGDTEEIVLKETIKL 480 Query: 400 CGHHFDAE---GIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455 + +++++ + LVK+ MG+++ V+ D D + +L Sbjct: 481 MPEEIQHKILSNVQIVKARGKAAIISLVKYLNSMGLDYFVIHDRDRGTDRAENYNIHILT 540 Query: 456 NDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPE 494 E + + ++ E ++ + E Sbjct: 541 AMNNQESKRIMMEECIEDELGYPAPSSEKPYNAYQKTQE 579 >UniRef50_A9VQW9 Putative uncharacterized protein n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VQW9_BACWK Length = 628 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 85/577 (14%), Positives = 172/577 (29%), Gaps = 81/577 (14%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLS------------ 47 M L +++ FR + + + LIG N GKS++L+AL + + Sbjct: 1 MKLTTIKLENFRSYHGEVVIDISNFTTLIGRNDAGKSTILEALEIFFNAEIVKPDPNDVC 60 Query: 48 --PESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT- 104 + P I + + G +++ A Sbjct: 61 KFSGGTSFSITCCFSDLPSSIIIDDSVPTSFNREYLLNNNGELEIKKVYNCSAVRIIPKV 120 Query: 105 ------------------------------DGYHRIFYRLEGESAEDGSVMTLRSFLDKD 134 D R++ + S D M LR Sbjct: 121 FLNTVVPDIQEMHELVTFNNLSLKAIARKQDINERLYTKTSNVSLRDAIRMHLRDKYPDV 180 Query: 135 GHPIDVEDINDQARHLV-------RLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLD 187 G + +I+ ++L RL+P L A R + V N P +D Sbjct: 181 GDREYLLEISGTNKNLKEIHTKIGRLLPHYALFQADRPSRDEDSEVQN-PLKLAIKSAID 239 Query: 188 FLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYL 247 +A EL + + D + + +L + A Q + + ++ ++ Sbjct: 240 QVAPELERIREKVQDEVLDVANHTLRKL--EEMDPKLAQQLIPQPKKEPEWHKIFNFTLD 297 Query: 248 DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVA 307 I++ G R+ILL F + R ++ +L +E+PET HP Sbjct: 298 GDNEIPINKRGSGVRRLILLNFFRAQAE-----RDSQEKDIILAVEEPETAQHPNNQRKL 352 Query: 308 WHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRR 363 L L Q + TT+ + + PV+ + + E+ + + + + Sbjct: 353 VETLMSLSGEQNYQVLITTHVPAIAEMLPVDSLRYITEENKESKRITNSNDEVYLQIAEQ 412 Query: 364 ISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC------GHHFDAEG-IKVIEFAQ 416 + A +L VEG+ + + ++R G D I + Sbjct: 413 LGILPDKR------ASVFLCVEGKNDVSFLKHISRVLYSEGEIGFQLDENSEIVIFPVGG 466 Query: 417 SGLKP---LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDM 473 + + + + ++D D+ + + L +M Sbjct: 467 CSSLKQFVFEHYLKEFNLPYIYIMDKDDKEADHKDFRQIREKLSGLNNNSELFVTERREM 526 Query: 474 EHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHR 510 E+++ + + E V L + + Sbjct: 527 ENYLCPELIKRFVFDRYRFAEEVSFELNIRQETNVPK 563 >UniRef50_C6PLM4 SMC domain protein n=2 Tax=Thermoanaerobacter RepID=C6PLM4_9THEO Length = 658 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 92/613 (15%), Positives = 178/613 (29%), Gaps = 80/613 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLY----HF 55 M L RV I FR I + + + N+++G+N GKS+++ A+ L+L + Y + Sbjct: 1 MYLHRVVIKNFRSIEYVDITFAKGKNIIVGKNNCGKSNIIKAIDLVLGESNPAYVKNENI 60 Query: 56 ERDDFWFPPGDINGREHHLHI--ILTFRESLPGR----------------------HRVR 91 DF+ +E + I + E + Sbjct: 61 TEKDFFTYKIKDETKEEIVVTNDIFIYCELRRDEGEDIPYDMMLECSGFYKYSRSIDKDA 120 Query: 92 RYRPLEACWTPCTDGYHRIFYR------------------------LEGESAEDGSVMTL 127 E + D + L+ EDG V Sbjct: 121 IKNCFENEFLINPDELRYEEKQYINPKKNIDQVVEEFENKYIFAFALKAYRNEDGDVKKE 180 Query: 128 RSFLDKDGHPIDVED--INDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTAR- 184 F ++ + ++ + RD RI + +T Sbjct: 181 LRFFYREDENSNWTMAFSAPIRNEFLQSAIIPSFRDPMVQLRINQWSWYGKLLRHLTKNH 240 Query: 185 QLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW 244 D ++ + ++D + + ++ + + Sbjct: 241 NKDDELKKAFLRVKEIADEVFSDVKQKISNGSFNVAFPGTEILFQFSADEKPDIYKNVVI 300 Query: 245 RYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIML 304 D +I G ++GLF+ + T + LL +E+PE LHP Sbjct: 301 YIDDGYKSLITDKGSGIQSATIIGLFSYYINYVNT-----KSSALLCLEEPELYLHPHAC 355 Query: 305 S----VAWHLLNLLPLQRIATTNSGELLSLTPVE-HVCRLVRESSRVAAWRLGPSGLSTE 359 LN Q I TT+S E L ++ + R A +L Sbjct: 356 RTINYKLDEFLNDGKNQVIITTHSPEFLKTIEPNMNIILARKNEGRTAIHQLNVKKFKD- 414 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELA-RQCGHHFDAEGIKVIEFAQS- 417 + N+ FA ++ EG + ++I +A G+ + E I VI Sbjct: 415 ------VLVDNNQNEVFFADKVIVCEGY-DNYIIKWIAEELYGNKLNEENISVISVGGKD 467 Query: 418 GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 + V ++GI+ +++ D D + + E + L Sbjct: 468 NISKFVDLTLKLGIDTYIVADFDYFLRDKDEEKVRKYKDKGAKCHESIGNLGERFFISRF 527 Query: 478 YRQGFSDV-FHRMAQIPENVPMNLRKIISKAIHRS---SKPDLAIEVAMEAGRRGVDSVP 533 +G + + +K+I K D + G+ + Sbjct: 528 GEEGKKIFGLVSKIRNIIKQNYEEKFYTAKSIEDFRGEEKFDRLEAILRTLRTNGICILS 587 Query: 534 TLLKKMFSRVLWL 546 ++ F++ L Sbjct: 588 GDIESFFNKDFQL 600 >UniRef50_Q1WRW0 Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WRW0_LACS1 Length = 679 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 67/522 (12%), Positives = 153/522 (29%), Gaps = 72/522 (13%) Query: 1 MILERVEIVGFRGINRLSLMLE------QNNVLIGENAWGKSSLLDALTLL------LSP 48 M L V++ +R + + L+L+ +++IG+N GK+S L + + LS Sbjct: 1 MYLNEVKVKNYRSLKDVKLVLDKEKGTPNLSLIIGKNNSGKTSFLKIMKKMIAEDRKLSW 60 Query: 49 ESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRV------------------ 90 + + R+ G E + I+ + Sbjct: 61 DDFNIQYRREIHNILVSKEEGNEEDIEGIILDLYMEYDDNDDLNNILPLMLDLNMENNIV 120 Query: 91 -------RRYRPLEACWTPCTDGYHRIFYRLE-------GESAEDGSVMTLRSFLDKDGH 136 +E D + + + + E + + Sbjct: 121 VLEFKCQPIIHKIEELRNLVNDTELKEYRKFSDFMQENLNKYFETNVYARGYDYESHELT 180 Query: 137 PIDVEDINDQARHLVRLMPVLRLRDARFMRRIR--NGTVPNVPNVEVTARQLDFLARELS 194 + + + ++ + + RD + R + RE Sbjct: 181 DAIEKLDSSIVKKIINITGISAKRDTSNNEKDRTLSQIAAKYYENFSDEEDKIRSLREEV 240 Query: 195 SHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR----YRLMRRRASNEQRSWRYLDII 250 S + + + + ++ ++ + + + + D Sbjct: 241 SKTDGILNKEYNKLFKDVIDDFRNFGNFPNGEEDVNIHSKMDVSKLLKGNTVFSYQYDKE 300 Query: 251 NRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHL 310 + + G ++ + K ++ +L IE+PE HP + V Sbjct: 301 DLPENYNGLGYMNLLGIIFEVKACFQKFRQDSNRSKINILYIEEPEAHTHPQLQYVFIKN 360 Query: 311 L--------NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL----GPSGLST 358 + + L +Q I TT+S ++S E ++E Sbjct: 361 IGKLIENEKDNLNVQTIITTHSSHIVSQCKFEDTNFFIKEKDNAQIKSYADLENLYKNEK 420 Query: 359 EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH---------FDAEGI 409 E + +I +R FA +L+EG+TE ++ + + ++ ++ I Sbjct: 421 EVFEFVKKYITLSRAEIFFADKLILIEGDTERILLPTMMERVDNNKNNGKDVPPLLSQNI 480 Query: 410 KVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVR 451 V+ + L K + ++ V+ D D G K Sbjct: 481 SVL-VIGNHAHVLSKLISFLNLKTLVITDIDAKGIKGGKIKN 521 >UniRef50_C1DUM9 ATP/GTP-binding protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUM9_SULAA Length = 484 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 74/507 (14%), Positives = 157/507 (30%), Gaps = 51/507 (10%) Query: 1 MILERVEIVGFRGINR-LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L ++ I FR + +E V +G N GKSS+L+AL + + F DD Sbjct: 1 MKLRKINIENFRCYKDETEVEIEDLTVFVGANDSGKSSILEALDIFFNEGRAEIRFTEDD 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 + + + + R LE P D I + Sbjct: 61 INIHARMEGKHDVKITCVFEDI-------PEQFLRRLEENNIPINDSSITISKTFGKNNK 113 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPN---- 175 + L L + +P+ L N + + Sbjct: 114 TFLNGEELSKKL---------------IGEIKDYLPIYGLFKVDRTNTDDNPEIKDPLMF 158 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRR 235 + +++ + +E++ + + L + +L + +E ++ Sbjct: 159 AVEKSLKEQEIKYKLQEVAEKIKKAIEDVANGTLDKLKKLNGNIATELNVYIPDIEELKW 218 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 R ++ I G R ++ LF + + + + IE+P Sbjct: 219 RDVFKRIGIYSDKGILLNKRGSGVRRLILLSFFLFEAERKRYERHTDEIEISTIYAIEEP 278 Query: 296 ETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 ET LHP + L L +Q + TT+S + L PV + + + ++ Sbjct: 279 ETSLHPDQQKQFINSLIELSSNEKVQVLLTTHSPYIAKLIPVNSLRFIDQGYQYT-LPKV 337 Query: 352 GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELAR---------QCGH 402 I+ + + + + + VEG T+ + + Sbjct: 338 SSYKEDNNILLNIAKRLGIHPIN---TKVVIFVEGNTDKKFLININENIKELKDLIHLNS 394 Query: 403 HFDAEGIKVIEFAQSGLKPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREA 460 + I +I S L + + + G+ L D D +K + +N+ Sbjct: 395 EIENNTITIIPLNGSNLIDWINAHYLKGSGLLEFHLYDND---RKDYQEIIEKVND--RN 449 Query: 461 EREHLTALPALDMEHFMYRQGFSDVFH 487 + ++E++++ + F+ Sbjct: 450 DGSIGLTTSMREIENYIHWDLIEEEFN 476 >UniRef50_B4BS89 SMC protein-like protein n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BS89_9BACI Length = 508 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 86/510 (16%), Positives = 171/510 (33%), Gaps = 77/510 (15%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPE-SDLYHFERD 58 M + + I FR I + + ++ N+LIG+N GKS+++ AL LLL + + Sbjct: 1 MFVSDLYIKNFRSIKDIHVSFKEGKNILIGKNNAGKSNIIKALDLLLGEKLPSKSSLDIK 60 Query: 59 DFW-----FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLE------ACWTPCTDGY 107 DF+ + + I + +P + + + + W + Sbjct: 61 DFYAVEREIKGNKKIDYANEMFIAVKLSGKVPDSNTFQEIKIIRQERFGIEYWAKFENDK 120 Query: 108 HRIFYRLEGESAE--------------------DGSVMTLRSFLDKDGHPIDVEDI---- 143 I +L+ + E D + + ++ G + Sbjct: 121 VIIHDQLKMDYDEFDPKRDLDKFEGTDLCYWIRDKEEVIFYIYANRYGSDDEDMQFIHGM 180 Query: 144 ---NDQARHLVRLMPVL--RLRDARFMRRIRNGTVPNVPNVEVTA-RQLDFLARELSSHP 197 + + R P + +LRDA I +++T L + L + Sbjct: 181 LVKDKKNEKYFRCFPTISKKLRDAFITSSILPAFRDPSNQLKITNWTWYGKLLKSLWDNK 240 Query: 198 QNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM--------------RRRASNEQRS 243 D +I++ + +L + F + + + S Sbjct: 241 NKEVDEEIKKQSEMIKKLTDKVFEDTANDIKSKLKELINYSYISFRMLPNEKDDIYKNVS 300 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 D I + G +++GLF+ LL +E+PE LHP Sbjct: 301 IYINDGIESQLSEKGSGLQSALIIGLFSYYCSKLH------KCNSLLAVEEPELFLHPHA 354 Query: 304 LSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESS--RVAAWRLGPS 354 + + L+ Q I TT+S E + T +E++ + + + L + Sbjct: 355 RRMLSNKLDEFVSLDDNYKNQVIITTHSQEFIRNTEIENIIVVRKPEGTSETKTFSLTNN 414 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH---FDAEGIKV 411 + ++ ++I + FA +LVEG E ++I +A D I V Sbjct: 415 ERTIQEIQKIKQLLWSKNSELFFADKVILVEGG-EEYIIPLIADFIFEQTGILDKRNISV 473 Query: 412 IEFAQSG-LKPLVKFARRMGIEWHVLVDGD 440 ++ + R +GI++ V+ D D Sbjct: 474 VKVGGKSQFGIYMALLRDLGIDYFVIADFD 503 >UniRef50_B2JTM2 Initiation factor 2 associated domain protein n=2 Tax=Burkholderia RepID=B2JTM2_BURP8 Length = 680 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 82/580 (14%), Positives = 155/580 (26%), Gaps = 78/580 (13%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL---LLSPESDLYHFERD 58 L VEI F+ + L + L +L+G N GKSS+L A+ S E Sbjct: 119 KLASVEITNFKAVKNLRVPLSDVTILVGPNGSGKSSVLQAIHWATRAASYIPPQSQSEVV 178 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIF-YRLEGE 117 F + + +R A + RI+ R G Sbjct: 179 SFERLDYSPSSEPLTTAHRGELSTDRSSQPTSVAFRHAGAGDETSSTATVRIWAARNRGG 238 Query: 118 S---AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVP 174 E GS ++ ++ + + + P+LR R G V Sbjct: 239 ISVHIEGGSAVSPFKQREELITTYIPGLAGLSEKETILVKPLLR----RQAAGGDAGGVL 294 Query: 175 NVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMR 234 + +RQ ++ + L + +L++ + + Sbjct: 295 RNVLFNIASRQPAETDNRMAE-----------ERLLNLNRLVQMVHPNVRVEVS-FDERE 342 Query: 235 RRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIED 294 + L + R ++ ++I + + L + K L+LI++ Sbjct: 343 DVHIQASFDDQVLSGVKRPLEAAATGVLQIIQIFAYLILFRPK-----------LILIDE 391 Query: 295 PETRLHPIMLSVAWHLLN----LLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR 350 P+ LHP L +Q + TT+S + V V Sbjct: 392 PDAHLHPDKQERLIEALEFASDEFDVQVLLTTHSPHIARAASPAASLLWVNNGQVV---- 447 Query: 351 LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIK 410 E R + +R F VE E + I + RQ I Sbjct: 448 ----EEQDEAIRSLLGWGGLDRKILFF------VEDENDH-AIRAILRQ--WPQLNRQIT 494 Query: 411 VIEFAQSGLKPLVKFARR------MGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREH 464 + P + + + D D ++ + A Sbjct: 495 ICRCFGVDNLPKNALLKGLLGEQTFDVRVVIHRDRDFMTEQESERWGERYTTTGVA---- 550 Query: 465 LTALPALDMEHFMYRQGF--------SDVFHRMAQIPENVPMNLRKII---SKAIHRSSK 513 + D E + + + + RK+ K I+R Sbjct: 551 VWVTRDSDAEAYFCTPAYLSSLYGVSEQIASDWVDTAAQSCTDGRKVFFDKRKHINRLLY 610 Query: 514 PDLAIEVAMEAGRRGVDSVPTLL--KKMFSRVLWLARGRA 551 D + +P + K + + + + Sbjct: 611 EDGGSPASERLWNVDAKDLPKNILGKTLHKSLKNIVKTNG 650 >UniRef50_UPI0001BC7DE3 hypothetical protein BacD2_01103 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC7DE3 Length = 589 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 73/574 (12%), Positives = 165/574 (28%), Gaps = 123/574 (21%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M + V I FR + + ++N + +G N GK+S + A+ L + E Sbjct: 1 MRINHVHIRNFRKLRNCRIDFDENQTIFVGANNSGKTSAMSAIIWFLKGKDRFTTREFTL 60 Query: 59 ------------------------------------DFWFPPGDINGREHHLHI-ILTFR 81 D W + + + I LT++ Sbjct: 61 TNWIKINELADKWLVFDEVDPLLLTPNQWDDIVPSLDIWIDVSESEAYQVYKIIPSLTWK 120 Query: 82 ESLPGRHRVRRYRPLEACWTPCTDGYHRIF-YRLEGESAEDGSVMTL----RSFLDKDGH 136 + G + +++ + ++ + E E ++ FL+ + + Sbjct: 121 KDSVGVRLRFEPKDIKSLYADYKKEVMKVRNLQASPEYKETRNLKLYPQNMWDFLNHNHN 180 Query: 137 PIDVEDI---------------------NDQARHLVRLMPVLRLRDARFMRRIRNGTVPN 175 + +I D + L+ ++R+ R + N Sbjct: 181 LLAYFNIKYYVLDSEKINHELESEVQVTPDDSLEENPLVDLIRIDSIEAFREFSDPMGKN 240 Query: 176 VPNVEVTARQLDFLARELSSHPQNLSDGQIR--------------QGLSAMVQLLEHYFS 221 +++ ++QL R+ + + G ++ + + + + Sbjct: 241 ESDIDTLSKQLQAYYRQNYTDETIIETGDLKLMEELSRANTSYDLKLQKSFSMPIGELSN 300 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRMID----------RPGGRSYRVILLGLFA 271 G + R N S + + I G +I + L Sbjct: 301 INYPGFQNPSISIRSNVNIVDSISHDSSVQFSIQGKPELSLPEKYNGLGLRNLISIYLKL 360 Query: 272 TLLQA--------KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL---------- 313 + + ++ + L+ IE+PE LH V Sbjct: 361 IQFREQWTRNSKNEEDVKKSIEPIHLVFIEEPEAHLHAQAQQVFIRKALEALTNAAENNA 420 Query: 314 ------LPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP--------SGLSTE 359 L Q I +T+S +++ + + R + + + Sbjct: 421 LKENPNLTTQLIVSTHSNHIVNEVDMNCLRYFRRVLDEIIGIPVSKVVNMSRTFGENEND 480 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419 + ++ +I+ FA +LVEG E ++ ++ G D I V+E S Sbjct: 481 TKKFVTRYIKLTHCDIFFADAAILVEGAAERILMPHFIKREG--MDNYYISVMEINGSHA 538 Query: 420 KPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSL 453 +++ I ++ D D + + Sbjct: 539 HRFSSLLKKLNILTVIVTDIDAQQEVEEDGKKKK 572 >UniRef50_A9VNT7 Putative uncharacterized protein n=2 Tax=Bacillus cereus group RepID=A9VNT7_BACWK Length = 728 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 79/640 (12%), Positives = 193/640 (30%), Gaps = 110/640 (17%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M ++++++ +R + + +E +++IG+N GK+SLL A + + F DD Sbjct: 1 MKIKKIKVSNYRLLKNMIFDMEENLSLIIGKNNCGKTSLLSAFEKFIGVKVGGNEFCYDD 60 Query: 60 FWFPPGDINGREHHL------------------------------------------HII 77 F + L II Sbjct: 61 FNMDFQEELYSIVKLNSIPTGLRFPMGIKLQLFITYDEFDNLINMSQLMMDLDPENNTII 120 Query: 78 LTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHP 137 L+F +L + + LE D + + Sbjct: 121 LSFEYTLSNTSLENLINEFKEYKDKKLEKVEEDRESLEQNIFNDFMKKNHKKYFKIW-RK 179 Query: 138 IDVEDINDQARHLVRLMPVLR-------------------LRDARFMRRIRNGTVPNVPN 178 D Q ++ V + + + + ++ R + + + Sbjct: 180 SVAYDWEKQKKNEVEFVDLTKRNIALNKIINFKTIGARRNISNSNNDRTLSALSSKYYES 239 Query: 179 VEVTARQLDFLA--RELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR-----YR 231 + + ++ + +E S N D +Q ++ ++ + + + Sbjct: 240 KTDSEKGIEEVEVFKETLSKTDNELDSVYKQLFKTVIGKVKQFGGIKEGDSNIRIVSTLQ 299 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP--- 288 N + + + G ++ + L+ + K+ P Sbjct: 300 HKELLKGNTTVMYEHFEKQTLPESYNGLGYLNLLSMIFEIELIISNFRKEHKKNEMPADI 359 Query: 289 -LLLIEDPETRLHPIMLSVAWHLLNLL--------------PLQRIATTNSGELLSLTPV 333 +L IE+PE HP M + + + + LQ + TT+S + + + Sbjct: 360 NILFIEEPEAHTHPQMQYIFINNIKKILEEASIGEDGKTKFNLQTLITTHSAHITNASNY 419 Query: 334 EHVCRLVRESSRVAAWRLGPS-------GLSTEDSRRISFHIRFNRPSSLFARCWLLVEG 386 + +E+ + ++ + + ++ +R FA + +EG Sbjct: 420 NDIKYFYKENKNEVISKNLKDLEKEYEKDGEEQNYKFLKQYLTIHRSELFFADKAIFIEG 479 Query: 387 ETETWVINELARQCGHH--------FDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVD 438 +TE ++ + ++ ++ ++ I ++E + KF +GI+ ++ D Sbjct: 480 DTERILLPAMMKKIDNNSEYKSSPPLHSQNISILEV-GAYSHIFEKFINFIGIKSLIITD 538 Query: 439 GDE------AGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQI 492 D K+ R L ++ L +E + + ++ Sbjct: 539 IDSGKNVIVKEKEKIEKCRVLDSDAELTTNSSLKFFYKNGLEENKRSVIYKNELDYFKKL 598 Query: 493 PENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSV 532 N + + +K +S K ++AI + Sbjct: 599 SFNQKILQKIKETKNWEKSEKGNIAIIYQTSEENSKGEKY 638 >UniRef50_A3DGM5 SMC protein-like protein n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DGM5_CLOTH Length = 688 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 91/601 (15%), Positives = 198/601 (32%), Gaps = 88/601 (14%) Query: 1 MILERVEIVGFRGINRLSLMLEQN-NVLIGENAWGKSSLLDALTLLLSPESDLY-HFERD 58 M + ++ I FR I + S+ NVL+G+N GKS+++ AL L+L ++ +Y Sbjct: 1 MFVSKLLIRNFRSIEKESIDFRPGKNVLVGKNNSGKSNIVKALDLVLGEKNPVYLDINEK 60 Query: 59 DFWFPPGDINGR-EHHLHIILTFRESLPGRHRVRRYRP---------------------- 95 DF+ D N + + I + + + Sbjct: 61 DFFTYYEDGNEKVKKAFFIAVKLEGNDINEELFKSISGAWLATVGDKNLIEDFFNTSKNP 120 Query: 96 ---LEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVR 152 ++ T Y + L + S + D+++Q + + Sbjct: 121 ELLIKNFDTLSNRKYCKDTEELFDIFRNAQELYIYFSVMKNAEIENIDYDMDNQQGNYSK 180 Query: 153 LMPVL------RLRDARFMRRIRNGTVPNV-------PNVEVTARQLDFLARELSSHPQN 199 + R ++F ++N + + N E+ + R + +N Sbjct: 181 TYSIFLKHGNQYYRCSKFSNDLKNSLITSAILSAVRDINKELRINTWSWYGRLIRDIWEN 240 Query: 200 LS---DGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQR-------------- 242 + +I + LS + ++ + F+ + ++ Sbjct: 241 CNPSQKREIDKKLSEIKEITDDIFTNAASDIEEKIKKAIYHNSISFQLLQNTKDDIYKGI 300 Query: 243 SWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPI 302 + D + +++ G +++ LF+ LL++E+PE LHP Sbjct: 301 NIFVNDGVEGLLEDKGTGIQSAVVISLFSYYCSKFHKNS------SLLVVEEPEIYLHPQ 354 Query: 303 MLSVAWHLLNLL-------PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSG 355 V + + Q I TT+S E + T + ++ + + S + R+ Sbjct: 355 ARRVVSNKFDEFVNLNSTNRNQVIITTHSSEFIRNTDIGNIIVVKKVSGKTKTRRIQMET 414 Query: 356 LSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH---FDAEGIKVI 412 ++ ++ I FA +LVEG E ++I +A D I V Sbjct: 415 GKHKELAKLQNIISTKNAEIFFADKVILVEGG-EEYLIPLIAEHYYQEKGFLDYNNISVA 473 Query: 413 EFAQSG-LKPLVKFARRMGIEWHVLVDGDEA-----------GKKYAATVRSLLNNDREA 460 + KP ++ +GIE++V+ D D + + + + E Sbjct: 474 KVGGKSFFKPYMEVLSCLGIEYYVIADFDILHNGLEDIDEFINEFSQEELNDIRKSLNEI 533 Query: 461 EREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIIS-KAIHRSSKPDLAIE 519 + + D+ + + S + + + + K I + +P + + Sbjct: 534 IPIDEPWIKSKDIREKLLKPDKSMDAKSLCTVIDEICATEEYNDKLKEIWQYVRPKVTKK 593 Query: 520 V 520 V Sbjct: 594 V 594 >UniRef50_A9BIN7 ATP-dependent endonuclease of the OLD family n=3 Tax=Bacteria RepID=A9BIN7_PETMO Length = 573 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 86/536 (16%), Positives = 163/536 (30%), Gaps = 64/536 (11%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M ++ + I FR + L NVL+G N GKS++L AL + E F DF Sbjct: 1 MKIKSITIHNFRSLKDAMFDLYDYNVLVGANNVGKSNVLTALRIFYENEKYNEKF---DF 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP-CTDGYHRIFYRLEGESA 119 D N + L E ++ + + ++ +++ Sbjct: 58 PKFQTDDNESWIEIEYSLEDDEFPNLKNEYKSLNNILKVRKYLKSEDKNKVKNNQSNIYG 117 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + ++ F L L+L +R + + V Sbjct: 118 YENGHLSENLFYGAKNISEAKLGSVIYIPELSTTDETLKLTGPSPLRDVITFVMKKVVKT 177 Query: 180 EVTARQLDFLARELSSHPQNLSDGQ---IRQGLSAMVQLLEHYFSEQGAGQARYRLMRRR 236 + +L+ E +S + S + + + + L+ + E R Sbjct: 178 SESFDKLNTAFEEFNSKFKEESSKDGFSLGKMMEEINDSLKEWEVEFNFNINPIRHEDII 237 Query: 237 ASNEQRSWRYLDIINR-MIDRPGGRSYRVILLGLFATLLQAKGTLRLDK----DARPLLL 291 + ++ R + G R ++ L Q +K L+L Sbjct: 238 KNLVSHYVVDKNLEERIDVKCLGQGLQRHLIYTLLKLSSQYTEKKTYEKKEFLPELNLIL 297 Query: 292 IEDPETRLHPIMLSVAWHLLNLLPL----QRIATTNSGELL--SLTPVEHVCRLVRESSR 345 ++PE LHP L L Q I T+S + ++ + + +L R+ Sbjct: 298 FDEPEAFLHPAQQEFLNTSLKSLSSEEGQQVIIATHSPIFISKNIEDIPALIKLKRDKGI 357 Query: 346 VAAWRLGPSGL-------------------------------------------STEDSR 362 +++ +++ Sbjct: 358 TQIFQVSKDKQRKIIEQNNELVQMLKNKLVEKSIDQAMENSIKNIMGSTEDDERMEQEAI 417 Query: 363 RISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQS-GLKP 421 R + R S+ FA L+ EG TE I+ L + + + I V++ + Sbjct: 418 RYLLWLDSERCSAFFADIVLICEGATEKTFIDYLIKNKWNDIRKKRIYVLDAMGKFNIHR 477 Query: 422 LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFM 477 + R +GI VL D DE K A + ++ E D+E F+ Sbjct: 478 YMNLFRELGIYHSVLADKDE--NKNAHEFINQFIEKQKNEFTKSIDFFDKDIESFL 531 >UniRef50_A4WDI6 ATP-dependent endonuclease of the OLD family-like protein n=3 Tax=Gammaproteobacteria RepID=A4WDI6_ENT38 Length = 582 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 79/492 (16%), Positives = 158/492 (32%), Gaps = 63/492 (12%) Query: 1 MILERVEIVGFR----GINRLSLMLEQNNVLI--GENAWGKSSLLDALTLLLSPESDLYH 54 M + + FR GI+ ++ + N L G N GKS+ L A S E + Sbjct: 1 MKISFFGVNNFRTISGGIDNNKIIFKDTNTLFIYGANNAGKSTFLKAYMFFYSNEKPMI- 59 Query: 55 FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 DDF + + E R + + E+ + + R+ Sbjct: 60 ---DDF---FKRDGNNSIEFELEVQLDELDKERIEAKAPKQKESYKKYLNND----YIRI 109 Query: 115 EGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARH----------LVRLMPVLRLRDARF 164 + +DG+ + +++ + E L + + + + Sbjct: 110 KKVWRKDGAKIEDKNYTYDYSKGDNGEYDEVGYATVGLHTVFQSCLPKPVFIKAMPTEEE 169 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFL---ARELSSHPQNLSDGQIRQGLSA-MVQLLEHYF 220 ++I N + + + L+ L ++ + D ++ + + + F Sbjct: 170 AKKILNEILKMMAESTLKTSDLEELKAAQDKIKELQDKMYDPELIETYQSSVNGYFNKIF 229 Query: 221 SE------------QGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLG 268 + R + + + I G + R + Sbjct: 230 GDTAICFKDQKDRVIWTENKLGRDFEIEFMKKNSQGDFDENIPSSYSSVGHGTIRTAIFT 289 Query: 269 LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLL-----NLLPLQRIATTN 323 L A+ R ++L E+PE L+P M+ L+ LP Q + ++ Sbjct: 290 LLLMRDVAERFERRQGRKDYMVLFEEPELFLYPRMVKELRELIYQVSTEDLPYQVLCASH 349 Query: 324 SGELLSLTPVE-HVCRLVRESSRVAAWRLGPSGLST----------EDSRRISFHIRFNR 372 S ++ L+ + + RLV SS ++++ L + Sbjct: 350 SSSMIDLSKPKSSIIRLVNNSSGTKSYQINDQFLKDAKGIATNDELKQEMYEVLRFNPYI 409 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLV-KFARRMGI 431 S +A LL+EG TE + ++ + I V+ P K R I Sbjct: 410 CESFYADEVLLIEGPTEEIISRAFLQEV---PSNKTIFVLNCGTVNNIPFYQKIFSRFNI 466 Query: 432 EWHVLVDGDEAG 443 ++HV+ D D+AG Sbjct: 467 KYHVICDTDKAG 478 >UniRef50_B7GJZ0 Predicted ATP-dependent endonuclease of the OLD family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJZ0_ANOFW Length = 569 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 79/562 (14%), Positives = 178/562 (31%), Gaps = 44/562 (7%) Query: 1 MILERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M L + + ++ + + + +L G N GKS++L+A+ ES Sbjct: 1 MRLIKFSVTNYKVFEKTFTIEFSKDSIVILTGRNNTGKSTILEAINCFFQKESKAKTIPS 60 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 D F + R+ + + F +++ + + TP + I + E Sbjct: 61 DCF-------SKRDKEIVLEAVFE--SDDENKITIVKKYKDGATPRFFDENDIEIKNNHE 111 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVP 177 + TL LD I + D L++ + +++ N Sbjct: 112 LKD-----TLSKILDNKPFYITPYMLPDDINELIQNIYSEIIKNDLEKLEELNEDNELEK 166 Query: 178 NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLL---------EHYFSEQGAGQA 228 + A + + + + + L + L + + + S + G Sbjct: 167 EMRELASEYNKIKKSYPEFLKKL-KSNTDKILEQVSMDVTNHLQTLFGNDHLSLKVIGGE 225 Query: 229 RYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP 288 S + N+ + + + L + L ++ Sbjct: 226 TEGFSVNDILKSTNSRINVSSKNKPDMPLSNQGTGLQRMSLIYLIQNMIEKKMLGQNENK 285 Query: 289 LLLIEDPETRLHPIMLSVAWHLLNLLPLQ--RIATTNSGELLSLTPVEHVCRLVRESSR- 345 LLLI++PE LHP + L + + + +T+S L+ L+ ++ R + Sbjct: 286 LLLIDEPEAFLHPEAVRALSQSLYKIGQRMPLMISTHSPILIDLSERHTSIQVFRVNEEE 345 Query: 346 -VAAWRLGPSGLSTEDS--RRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGH 402 + ++ +D +I ++ F ++VEG+TE A++ Sbjct: 346 AIQLYKSTSDQFDEDDIKNMKILNYVDSYVNEFFFTDKIIIVEGDTEYIAFKHFAKRKNV 405 Query: 403 HFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 + +I L+K + ++ VL D D K+ ++ ++ L N +E Sbjct: 406 NLH-----IIRARGKSTIRTLMKILNQFNADYDVLHDIDNDPKRSSSDLKKQLTNCKE-- 458 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVA 521 ++ F F + KI+ + A ++ Sbjct: 459 --IFKLKENRNVRIFCSIPNFEGAIGIGNISNAKKTQTIYKILHDEFDKEE-FANARKII 515 Query: 522 MEAGRRGVDSVPTLLKKMFSRV 543 + ++ L F ++ Sbjct: 516 ESLFEQIINREEAALDGGFRQI 537 >UniRef50_A8T0E4 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0E4_9VIBR Length = 553 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 81/544 (14%), Positives = 172/544 (31%), Gaps = 44/544 (8%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M +E++ I F+ I E+ N+L+G+N GK+++L+AL L+ S Sbjct: 5 MYIEKLTIKNFKKIESGEYEFNEKVNILVGDNDSGKTTILEALELVSSSNYRGKSINSSL 64 Query: 60 FWFPPGDINGR-------------EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDG 106 + R E + L+ G++ + C D Sbjct: 65 SPQLFNNKAVRTYLEGDLSKGSLPEILIEAYLSGCPEYRGKNNSQNKEYEGVFIKICFDE 124 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 Y +SA+ S+ T F + E I +R + L Sbjct: 125 DLTSTYEEFCKSAKVESIPTE--FYKVEWFSFSWEPIKFLSRKVKGLF---IDPTRLHPT 179 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + + N+ N +T Q L + + + L SE Sbjct: 180 YGKTQYLSNIINSSLTKEQQALLHLNYRQLKNSFEEQ------QQIQDLNNDLDSENQVT 233 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 + ++ S + L + + G I + L Sbjct: 234 EQNLSIIADTNSGTVEAGLQLAVDEVSFNHIGKGEQNKIQVKLALL---------NKGGN 284 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNL-LPLQRIATTNSGELLSLTPVEHVCRLVRESSR 345 + +E+PE L LS ++ Q TT+S +L+ + H+C + + Sbjct: 285 VNFVTVEEPENHLSHTNLSRLVKFISENTNNQIFITTHSSYVLNKLSLNHLCLISDD--- 341 Query: 346 VAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVI-NELARQCGHHF 404 L + + ++ + ++ + ++ +LVEG ++ ++ + + Sbjct: 342 ----YLRLKEIDSGTAKTLQRLPGYDTLRIVLSKKVILVEGPSDELILKKKYLQDNKRLP 397 Query: 405 DAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREH 464 + +GI +I G K ++ A+ +G + +V+ D D + + + N Sbjct: 398 EEDGIDIIVVRGIGFKHYLQIAKLIGTKVNVVKDNDGSYQTNIVDYANNFNFKNIKFFSE 457 Query: 465 LTALPALDMEHFMYRQGF-SDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAME 523 + G + A+I + K++ + A+ V + Sbjct: 458 PNDKLKSLEPSLIAANGKDEKTLDKFAEIALSKIAYNEYKEIKSLDEKIEYFKAVYVGEK 517 Query: 524 AGRR 527 + Sbjct: 518 GDKN 521 >UniRef50_A3ELC8 Putative uncharacterized protein n=1 Tax=Vibrio cholerae V51 RepID=A3ELC8_VIBCH Length = 584 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 88/588 (14%), Positives = 183/588 (31%), Gaps = 68/588 (11%) Query: 1 MILERVEIVGFRGI--NRLSLMLEQNNV--LIGENAWGKSSLLDALTLLLSPESDLYHFE 56 M L +I FR I + ++ + NN+ L G+N GKSS+L A +P E Sbjct: 1 MKLVSFKISNFRAINGDNNNIYFKDNNIVFLFGKNNIGKSSVLHAYRYFATPNQK---VE 57 Query: 57 RDDFWFPPGDINGREHHLHIILTF-RESLPGRHRVRR----------YRPLEACWTPCTD 105 DF+ + I TF +E + + + W+ Sbjct: 58 LTDFYDQTTKN-----EIVIEATFLKEESDNENFADKGLNKWVDDEGLVKFKKTWSEVDK 112 Query: 106 GYHRIFYRLE-GESAEDGSVMTLRSFLDKDGH---------------PIDVEDINDQARH 149 + + +E G+ ++G + + + ++ E N + Sbjct: 113 AAKKQTFSIEVGDYVDNGFGGLEQILTNATPNIIYIEAMPNVKTLTDWLEKEIKNKLLKQ 172 Query: 150 LVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQG- 208 L + ++ +++ + +++ + + + N+ ++ Sbjct: 173 LKEDHYEEYSKALNAVKSLQDKVESSGYLGDISEAANKYFCKTFPNLQLNIQSTPHKEAD 232 Query: 209 -LSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILL 267 A + + + + E +R D G R ++ Sbjct: 233 LSKAFEKDFSVTIGDARKAEEAKLAEVVEIAEELVDEIDTTSSDRKFDLHGHGLIRQAII 292 Query: 268 GLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSV----AWHLLNLLPLQRIATTN 323 + A K + ++L E+PE LHP + + Q I ++ Sbjct: 293 NILALFKDTK------DGEKHIILFEEPELYLHPSNKRKFRDTLYQIAEQDDYQIICVSH 346 Query: 324 SGELLSLTPVEH--VCRLVRESSRVAAWRLGPSGLSTEDSRRISF----HIRFNRPSSLF 377 +L+ ++ + + + ++ G S ++ + + + F Sbjct: 347 DPQLIDMSRKHTSLARFVKKPNGETEIYQAGDDIFSRDEETKDRILMLNRFNPHICETFF 406 Query: 378 ARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVL 436 + +LVEG+TE ++ + H+ + I V+ P ++ I HV+ Sbjct: 407 SDEVVLVEGDTEAIILRGM---LSDHYPDKEIFVLNTGTKNNIPFFIEVLSHFKITQHVI 463 Query: 437 VDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENV 496 D DE V L D + L + + V R I Sbjct: 464 HDSDERYLYVDGKVS--LKKDESPKVNSAWTLNQNIWDELVKACEQGVVVKRYVSIRNFE 521 Query: 497 PMNLRKIISKAIHRSSKPDLAIEVAMEAG-RRGVDSVPTLLKKMFSRV 543 + K SK KP A E A S+ + LK++ + Sbjct: 522 HSHDYKHDSKK----GKPLSAYEFAKTLDINDNSKSIVSFLKQIVGDI 565 >UniRef50_B8FD16 SMC domain protein n=3 Tax=Proteobacteria RepID=B8FD16_DESAA Length = 572 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 89/563 (15%), Positives = 175/563 (31%), Gaps = 51/563 (9%) Query: 1 MILERVEIVGFRGINRLSL-MLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + ++EI+ FR I R + N LIG GKS+++DA+ L F D Sbjct: 1 MRIRKIEILNFRCIKRFFWCPSDGLNCLIGPGDSGKSTVIDAIDYCLGARRTA-QFTDAD 59 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + I LT + + Y + T R+E E Sbjct: 60 FH-----NLDVDTPISITLTLGDLDDALKNLDAYGLYLRSFDQETG-------RVEDEPE 107 Query: 120 ED-GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 +D +V+TL ++ D P+ + L +D R G + + Sbjct: 108 KDLETVLTLNLKVESDLEPVWSLLSDRATAQNASRN--LAWKDRIRSAPSRIGALSSYNL 165 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGL---SAMVQLLEHYFSEQGAGQARYRLMRR 235 L+ L E + L+ + +E + Sbjct: 166 GWRHGSVLNKLTDEKADSAAALAYAARQARRVFGEDAETQVEETLRIVSETSKELGVDIG 225 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 ++ Q ++ + I + LG+ +T L G R + LLL+++ Sbjct: 226 DKAHAQLDAHSVNFSSGTISLHNENGVPLRGLGVGSTRLLIAGLQRKAFEKSSLLLVDEV 285 Query: 296 ETRLHPIMLSVAWHLL----NLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 E L P + L + P Q TT+S + + L + Sbjct: 286 EFGLEPHRIIRFLSSLGAKESETPFQVFMTTHSPVVFRELSGNQLYVLREREESHVVMPV 345 Query: 352 GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN----ELARQCGHHFDAE 407 G R P S A ++ EG +E +I L + A Sbjct: 346 GVKDGIQGTIRCF--------PESFLASSVMVCEGASEVGLIRGLDLYLQSKGEQSIFAA 397 Query: 408 GIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLT 466 G+ +++ + + + +G V D DE + + A + Sbjct: 398 GVSLVDASGVSKIMARAMAFQSLGYRVVVFRDDDEQ------PNLNQEQSFERAGGTVVK 451 Query: 467 ALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGR 526 +E ++ + + ++ + I + + +S+ + +++ ++ Sbjct: 452 WRQGEKLESEIFNSLSDLAIALLVDKAVD--IHDYEFIDQHLKSASQNSVTLDMIPKSNE 509 Query: 527 RGVDSVPTLLKKMFSRVLWLARG 549 + K R+L +A Sbjct: 510 SAS------ISKEHRRILGIASS 526 >UniRef50_Q3ID90 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3ID90_PSEHT Length = 573 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 68/568 (11%), Positives = 152/568 (26%), Gaps = 79/568 (13%) Query: 20 MLEQNNVLIGENAWGKSSLLDALT--------LLLSPESDLYHFERDDFWFPPGDINGRE 71 L++ N++IG+N GKS++++ L + ++ + + + F ++ Sbjct: 6 PLKKVNLIIGQNNVGKSNIVNFLNDQYAYFVEKAKNQQNFGRNQQENPFKDIDHHVSNAR 65 Query: 72 HHLHIILTFRESLPGRHRVRR----------------------YRPLEACWTPCTDGYHR 109 + E + ++ + A W G Sbjct: 66 AQHRVSFPLFEEDVDSYINQKLPDERQHAVHRQLARKVLCSECFMHDGAIWFTYKSGSPN 125 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 + LE + + + R + + +R + A Sbjct: 126 GTFELEINADDIFQELNEREWQQLWNG------LTRHTGGGLRQHWLPESLKALAYLPDS 179 Query: 170 NGTVPNVPNVEVTARQLDFLARE----LSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 TV +P + + + + Q + + Sbjct: 180 IPTVEVIPAIRKIGGAGSEADDYSGEGIIERIAKIQNPPFAQ--QKLKEKFVAINGFIKE 237 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 ++D ++ G + V++L ATLL+ Sbjct: 238 VLENDTAEIEIPYERNMVLIHMDGKTLPLESLGTGVHEVVILAAAATLLE---------- 287 Query: 286 ARPLLLIEDPETRLHPIMLSVAWHLL-NLLPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 +L +E+PE LHPI+ L Q TT+S LL E V + Sbjct: 288 -ETILCVEEPELHLHPILQRKLIKYLSEKTENQYFFTTHSAHLLDAVESE--IFHVTQVD 344 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 V+ S + + L A C + VEG ++ +N Sbjct: 345 GVSCVEAISSTKQRSIICN---DLGYKASDILQANCIIWVEGPSDRIYLNYWLEAHSPDL 401 Query: 405 -DAEGIKVIEFAQSGLKPLVKF--------------ARRMGIEWHVLVDGDEAGKKYAAT 449 + ++ + L R++ ++ D D+ + Sbjct: 402 VEGVHYSIMFYGGRLFSHLTALDQDIENEAAEDLISVRKLNRNTVIMFDSDKDRPRARIN 461 Query: 450 V-RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRK----II 504 + L ++ + ++E+++ + + N+ Sbjct: 462 ATKQRLKDEFNSGPGFAWVTRGREVENYLDFDKVEESVKAVHPSASNLVNKGDWENLLKY 521 Query: 505 SKAIHRSSKPDLAIEVAMEAGRRGVDSV 532 K K ++VA ++ Sbjct: 522 KKLRSTEEKTASKVKVARHYVDSNPANL 549 >UniRef50_B8FV59 ATP-dependent endonuclease of the OLD family-like protein n=2 Tax=Bacteria RepID=B8FV59_DESHD Length = 601 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 94/586 (16%), Positives = 185/586 (31%), Gaps = 87/586 (14%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + V++ +R I+ ++++ N +IGEN GKS+ L + + + + F+ D Sbjct: 1 MRIFCVKVSNYRNIDGITVIFHPDCNYIIGENNLGKSNFLSLIGTVCAGKG----FDEKD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + + L + + ++P +I YR Sbjct: 57 F-------ADPDKAIEVELDIKLLQNEQGF------FGDNFSPEDASLLKIRYR------ 97 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + + I D N+ + + L + L+ R + + Sbjct: 98 ---------QTIKEAYPTIVSVDSNESIQARL-LRKINFLKYETTAVPSRELRLDSQKGA 147 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + + P L+D QI + + + L S + + + Sbjct: 148 GLLINGIIERFIA-DGEPAFLNDEQIGGLMKFINEHLGKIRS--FHDYSIKATIAPNPTE 204 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP----------- 288 S YL R ID G + + + L Q + Sbjct: 205 MLTSLFYLSDGYRKIDTTGSG-VQYMAMASINILCQIMELYKSKSSPFGEQLYTDDDGRK 263 Query: 289 ----LLLIEDPETRLHPIMLSVAWHLLNL---------------------LPLQRIATTN 323 +L I++PE LHP + L Q + T+ Sbjct: 264 LLPLVLSIDEPEVHLHPYLQRSLIGYYKKILCNEDVKFVELLKSCFGVDGLDGQLVIVTH 323 Query: 324 SGELLSLTPVEHVCRLVRESSRVAAW------RLGPSGLSTEDSRRISFHIRFNRPSS-- 375 S + L + ++ R + R A + + H+ + P Sbjct: 324 STDAL-VGDYRNLIRFHKNGDRTAVISGYALRPIEGANNEGRIKSENEKHLIMHFPEIKE 382 Query: 376 -LFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEW 433 +++C +L+EGETE I+ A + G D GI VI +KPL + I Sbjct: 383 AFYSKCAVLIEGETEYGCIHAFADKIGVALDDCGICVINAKGEKSIKPLRQLLTLFAIPS 442 Query: 434 HVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIP 493 + DGD + + A N+ E E + +L + + + + +Q ++ + A +P Sbjct: 443 IAIYDGD-VREGHTAAADEFFTNESCYEIEIVKSLYSQNKQD-IVKQIAKELDSQYATVP 500 Query: 494 ENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKM 539 + + I S+ + + P L + Sbjct: 501 LDFDFVSKHFKKMGIELYSQKTCENCGHTKKVKDASGYTPRSLADV 546 >UniRef50_A5VKD5 AAA ATPase n=4 Tax=Lactobacillus reuteri RepID=A5VKD5_LACRD Length = 537 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 83/569 (14%), Positives = 175/569 (30%), Gaps = 58/569 (10%) Query: 1 MILERVEIVGFRGINRL-SLMLEQN-NVLIGENAWGKSSLLDALTLLLSPES-------- 50 M L + + F+ L + +N N+L+G N GK++++ AL L+L S Sbjct: 1 MYLNELYLYNFKSFKGLQKITFNRNKNILVGNNGVGKTTVIQALRLILKGSSFEYNGVSY 60 Query: 51 --DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT--PCTDG 106 L + E + + LTF + +G Sbjct: 61 LAKLINAEIQKNYDIGTQSVDELPSFQLALTFETESDDELIPSLRKFEGETIIGGKKLEG 120 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR 166 I + E S + + + D + D+ +L D Sbjct: 121 KMGISFSYEFNSDYEDEFTLYQKTKNNDEKLLIPYDLYHVKHNLFGGGTYTARMDPMKSV 180 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 I N P + L ++ + + S + Q + Y E Sbjct: 181 FIDNDRFNGDPYNMFARQMYYTLDKKEQLLAKFTFRDKNNDLFSEINQKINGYNLEVNTD 240 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 R+ + +++Q + I+ G +I + Sbjct: 241 GLRFESLLGIKNDKQVA----------IEEEGSGKENLIKTKIAL----------DKSIE 280 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESS 344 L++IE+PE L + +Q I TT+ ++S V ++ L + Sbjct: 281 TKLVVIEEPENHLTASSTREQLANIEKNSDDVQIIMTTHDSHIVSRLSVRNLLWLKDFEN 340 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 R + ++ L + + L A+ +LVEG E ++ ++ Sbjct: 341 RKSIYKF--QDLDESTLEYFNKRDDLDFLRILTAKKVILVEGAAEYILMPMFLKKLNV-- 396 Query: 405 DAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREH 464 I+V+ +P VK + +G + V D D L +E E+ Sbjct: 397 -KNDIEVLSMNGRYYQPFVKLGKEVGNKILVFTDNDGE--------IERLQEIKEFNGEN 447 Query: 465 LTALPALDMEHF-MYRQGFSDVFHRMAQIPENVPMNLRKIISKA-------IHRSSKPDL 516 + L++ ++ + + + P + N+ ++ + K + Sbjct: 448 VRVYTDLNLLNYTFEVSEYEKNKTLICEEPFSTKANVENKVNGHTYDKYVSYMLNHKTKV 507 Query: 517 AIEVAMEAGRRGVD-SVPTLLKKMFSRVL 544 A+++ R +P + + ++ Sbjct: 508 ALKMQERFARIDSQYKIPDYIVEGIKWLI 536 >UniRef50_C5T1P1 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1P1_ACIDE Length = 703 Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 95/633 (15%), Positives = 179/633 (28%), Gaps = 105/633 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDA----LTLLLSPESDLYHFE 56 M L+ + I F+GI +L E L+GEN GKSS++ A L + S ++ Sbjct: 1 MKLKHIAISNFKGIQADNLSPESFTCLVGENNAGKSSVMQAIVFALNRPKNIPSAHFYDS 60 Query: 57 RDDFWFPPGDINGREHHL-----HIILTFRESLPGRHRVRRYRP---LEACWTPCTDGYH 108 F E HL + R Sbjct: 61 SQPVSFDFELSGVTEAHLARLSDEAKGKIAGLIVDEELALRVAYAPGESVSIQVKAQQPK 120 Query: 109 RIFYR-------LEGESAEDGSVMTLRS----FLDKDGHPIDVEDINDQA--RHLVRLMP 155 YR L G+ + L S F P+ + + +L P Sbjct: 121 EERYRSDAIDAALSGKKGQAAIEEALWSAYPEFKAAYSEPLKLLGTAKAFVKEQVAKLPP 180 Query: 156 VLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQI---------- 205 + + ++ + + + L +L Q+ S G++ Sbjct: 181 EQFTSGYTALPSGISASISPLLPEPIYIPAVKNLNDDL-KTSQSTSFGRLLGLLLEDMAE 239 Query: 206 -----RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSW---------------- 244 L + L E R+ +R S + Sbjct: 240 DLVHVNTALEKVNSLFNRVTIEGKVVDGRHAKVRDLESEVEGLLSANFPNVRVQLEIPPP 299 Query: 245 -----------RYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARP----- 288 D + +ID G R + L + + ++ DA Sbjct: 300 ELKTILNAAQIFIDDGSHDLIDNKGDGIKRSLTFALLQAYVNRQDKQKVQVDAGGKAPRP 359 Query: 289 -LLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVRESS- 344 + L E+PE LHP V ++ L + Q + TT+S + R+ ++++ Sbjct: 360 LIFLFEEPELYLHPRSQRVLFNTLARISENYQVLVTTHSPLFFAPGVTASFVRVAKQAAA 419 Query: 345 -RVAAWRLGPSGLSTEDSRRISFHIRFNRPS-SLFARCWLLVEGETETWVINELARQC-- 400 + A + + RF + F++ +L EGE++ +A+ Sbjct: 420 PKPIAKLFPVNFALNKADAETFRLARFEHADAAFFSQSVVLFEGESDDAYCKHVAQLFKD 479 Query: 401 GHHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 F+ + ++ + F GI ++ D D + ++D Sbjct: 480 EWDFERRNVALVRVSGKGNFLKFRNFFESFGISVRLVADLDAIFDGFKHLGTDKKSSD-- 537 Query: 460 AEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKP--DLA 517 + + + R+A + R+I +A S K + A Sbjct: 538 -----------------LRDKLLQTLDGRIAALGTKAEPKPRQIQRRANQDSWKDRYEAA 580 Query: 518 IEVAMEAGRRGV--DSVPTLLKKMFSRVLWLAR 548 L+ +F +AR Sbjct: 581 KAALQAVQAGAPVDAKTYEALEGLFVWEKEIAR 613 >UniRef50_Q7WY48 Pathogenesis-related protein n=5 Tax=Proteobacteria RepID=Q7WY48_PSEAE Length = 807 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 56/380 (14%), Positives = 109/380 (28%), Gaps = 41/380 (10%) Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDK-----DGHPIDVEDINDQARHLVRLMPVLRLR- 160 + L E V+ R+F+ D P+ + A L L+ V LR Sbjct: 186 TKYLTKELSKEYTFRYYVLDERAFVGYQAREADYEPLPLGKEPGGAAILKSLVRVDFLRA 245 Query: 161 -----DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAM-VQ 214 D R ++ + + + S+ ++ L + Sbjct: 246 QRHLDDPDAGSSDRAESLSRRLSRFYHRNLEKRGDDHAALKALDTSEKELNFHLKEVFND 305 Query: 215 LLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMI----------DRPGGRSYRV 264 L G ++ R A + ++ +I G + Sbjct: 306 TLTRLAKLGYPGVNNPEIVIRAALDPTTVLGQDAKVHYVIPGVASAQLPDSYNGLGFKNL 365 Query: 265 ILLGLFATLLQAKGTLRLDKDAR-PLLLIEDPETRLHPIML----SVAWHLLNLLP---- 315 + + + L + DK A L+ IE+PE LH + LL Sbjct: 366 VYMVVELLDLHEQWKAEDDKRAPLHLVFIEEPEAHLHAQIQQVFIRNVLRLLEDANDHAT 425 Query: 316 ---LQRIATTNSGELLSLTPVEHVCRLVRESS----RVAAWRLGPSGLSTED---SRRIS 365 Q + TT+S +L + R + L D + Sbjct: 426 LFHTQLVITTHSPHILYERGFSPIRYFRRVNDQLGHHTDVRNLSLFKTGASDAPAREFLQ 485 Query: 366 FHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKF 425 +++ F+ +LVEG E ++ + + + ++E + + Sbjct: 486 RYLKLTHCDLFFSDAVILVEGNVERLLLPAMIELVAKRLRSSALTILEVGGAFAHRFQEL 545 Query: 426 ARRMGIEWHVLVDGDEAGKK 445 +G+ V+ D D K Sbjct: 546 IAFVGLTTLVITDLDSVTVK 565 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 11/143 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M L+ + +R + + + L+ ++ +G N GK+S + L +L ++ FE D Sbjct: 1 MKLQAYRLQNYRRLRDVVIELDDEISIFVGANNSGKTSAVQGLYSML--RGEVKKFELFD 58 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + R L W + L + Sbjct: 59 FSAALW------AEIDAVGRTPPGDED-APKRLPSILLDLWFRVGEDDLATAMSLLPSTE 111 Query: 120 EDGSVMTLR-SFLDKDGHPIDVE 141 DG + +R +F +D H + + Sbjct: 112 WDGKCVGIRVAFEPRDAHELVWK 134 >UniRef50_B2FTZ5 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FTZ5_STRMK Length = 575 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 78/528 (14%), Positives = 152/528 (28%), Gaps = 69/528 (13%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 + + I FR I L N LIG GKS++LDA+ L L F DF Sbjct: 3 RIRHLAIRNFRSIKALDWSPAPGINCLIGPGDSGKSTILDAIDLCLGARRS-ISFGDMDF 61 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH-----------R 109 + + I +TF E + Y + D Sbjct: 62 FD-----LDVSEPIRIAVTFGELPASLMDIDVYGDFLRGFDSVFDTLEDEPAAGLETVLT 116 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIR 169 + ++ + ++++ RS + + + L P Sbjct: 117 LLLQVGADLEPSWTLISDRSLQQGLERSLPW-------KERIVLAPARIGSFTSSNLSWS 169 Query: 170 NGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQAR 229 G+V + + +L + + Q LS + ++ G Sbjct: 170 RGSV--LNRLTDERAELGAQLALAARQARANFGAQASPHLSQTLGIVRTTAQSLGVDVGS 227 Query: 230 YRLMRRRASNEQRSWRYLDIINR---MIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 + + + + + + G S R+++ GL ++ Sbjct: 228 MPQALLDSHSVSIGEGAIALHSEAGIPLRSLGTGSSRLLVTGLQRA----------AAES 277 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRE 342 P+ L+++ E L P L L PLQ TT+S L E + + Sbjct: 278 APIALVDEVEYGLEPHRLMRLLDSLGAKETPPPLQAFLTTHSPVALRELSGEQLLVVRPR 337 Query: 343 SSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINEL-----A 397 + G + I +R + P + A+ ++ EG +E + L A Sbjct: 338 PAGHVVISAGSTD-------EIQSTLRTD-PEAFLAKSVIVCEGASEVGFVRGLDLWGVA 389 Query: 398 RQCGHHFDAEGIKVIEFAQSGLKPLVK--FARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455 + G V + + +G V +D D+ + L Sbjct: 390 SKESSFLALGGAYVNAGGGTPDNAFARATALMDLGYRVLVFIDADKPA--APGVAEAYLQ 447 Query: 456 NDREAEREHLTALPALDMEHFMY----RQGFSDVFHRMAQIPENVPMN 499 + +T + +E ++ + + + MN Sbjct: 448 SG----GSLVTWRAGMTLEDELFLCLPDTSIDALLLKAKERVGEDLMN 491 >UniRef50_B3Q3S3 Hypothetical conserved protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q3S3_RHIE6 Length = 572 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 81/543 (14%), Positives = 162/543 (29%), Gaps = 59/543 (10%) Query: 1 MILERV-EIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M + R+ EI FR I +L + N L+G GKS++LDA+ L L L F Sbjct: 1 MSVVRILEIANFRAIRKLRWLPGPGVNCLVGPGDSGKSTILDAIDLCLGARRSL-TFTDA 59 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH---------- 108 DF + + I +T + Y ++ T Sbjct: 60 DFH-----GVDFDQPIRISITLGALDDPLKNIDAYGDFLVGFSALTGTVEAEPGAGLETA 114 Query: 109 -RIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRR 167 + ++ + + ++++ R+ + D R+ P Sbjct: 115 LTLQLTVQSDLEPEWTLVSPRAQAAGRMRNLSWAD-------RTRIAPARLGGAGDSHLT 167 Query: 168 IRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQ 227 R G+V + + L+ ++ D + + L ++++ E G Sbjct: 168 WRRGSV--LSKITEGKADASSELTRLAREMRDAFDQEKLKELEGSLKIVTAAAGEMGVPV 225 Query: 228 ARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDAR 287 A + + + + G R + LG L+ A +K Sbjct: 226 GAAVQALIDAGSISFT-----GGSISLHDESGIPLRSLGLGSSRLLIAALQRKAAEK--A 278 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRES 343 LI++ E L P + L P+Q AT++S ++ + + + Sbjct: 279 TTFLIDELEYGLEPHRIIRLLGALGAKEEVPPMQVFATSHSPTTVTELSAHQLHIVRHKD 338 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC--- 400 R +G R +L A ++ EG +E ++ L + Sbjct: 339 HEHTVTRASDAGDVQGTIRA--------HAHALLATSIVVCEGGSEIGLMRGLDQHFTGT 390 Query: 401 -GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 A G ++ + +G +L D D+A A Sbjct: 391 GELSLAACGATLVNGNGDETFSRANALQSLGYRVAILRDSDKAAPAAAEAA------FLA 444 Query: 460 AEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIE 519 + +E ++ ++ ++ R +I I S ++ Sbjct: 445 GGGQVFAWAGGRALEQELFSALSDASVAQLLELAVEA--KDRALIDAHIKTISNSSTSLI 502 Query: 520 VAM 522 V Sbjct: 503 VLE 505 >UniRef50_B0SBA1 ATP-dependent endonuclease n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBA1_LEPBA Length = 458 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 77/464 (16%), Positives = 157/464 (33%), Gaps = 25/464 (5%) Query: 1 MILERVEIVGFRGINRLSLMLE--QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 + +E +EI+ FR I S+ + NV++G N GKS++L AL L + D + + Sbjct: 2 IKIEHIEILNFRSIVSESIKFGCKEYNVIVGANNSGKSNILRALELFFNGTIDRKKYSFE 61 Query: 59 -DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGE 117 DF + + + I ++ + + + + + + Sbjct: 62 LDFPKATSILAKQTTQISIEFSYDPNKEKKIDLALTDIEKNTKQKRLSNNRLLLRLRLNK 121 Query: 118 SAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF--MRRIRNGTVPN 175 S E R+ + + ++ I D + VR + RD R I V Sbjct: 122 SGEPQWNFIGRA-GNLNIKQELIDKIVDVVLNSVRFKYIPIGRDILHTIQREISEELVRT 180 Query: 176 VP--NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLM 233 + + + + LS+ +L Q+ ++ L+ FSE + + Sbjct: 181 IFSGWSGSSVKYRQKINTSLSNLIDDL-KPQLSASSQSITNSLQQVFSEIKELELKLPFD 239 Query: 234 RRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIE 293 + D +D G LL L R + + IE Sbjct: 240 SVESMLTFLIPDLTDHYKTSLDSKGAGIQTSSLLFFLKYLAD-NHPQRHNAVTTFIWAIE 298 Query: 294 DPETRLHPIMLSVAWHLLNLLPL--QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL 351 +PE+ LHP+ +L Q +T+SG ++ + + ++SS + + Sbjct: 299 EPESFLHPLKQRGVSQILKEFSREVQTFISTHSGNFVNQEQETQLLVVEKDSSAPYSTII 358 Query: 352 GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN----ELARQCGHHFDAE 407 + I S + +++EG ++ + +L + + E Sbjct: 359 KSNKYDDARESLGVSLID----SMFLKKTNIILEGPSDEILFQGSLLKLHEGKKINLNPE 414 Query: 408 GIKVIEFAQSG-----LKPLVKFARRMGIEWHVLVDGDEAGKKY 446 +K + + + +++DGD+AGKK Sbjct: 415 DVKFFTGNNCNSACLLFEAYYPLTKTGEVRNILIIDGDDAGKKA 458 >UniRef50_Q8PTL3 Putative uncharacterized protein n=1 Tax=Methanosarcina mazei RepID=Q8PTL3_METMA Length = 782 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 75/527 (14%), Positives = 148/527 (28%), Gaps = 87/527 (16%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYH------ 54 M+L V I +RG+ + L L + ++GEN GKSS L AL+L ++ + Sbjct: 22 MLLNSVRIENYRGLRDICLPLSRFVCIVGENNSGKSSTLLALSLFITGSKVNKNDYYDST 81 Query: 55 ----------FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 D + + + + Sbjct: 82 KPVRIEVELNICESDLAKVKDEHKDKIFEIITDKKLTLVRRYETDDSVNLCYKKLMPVDK 141 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRL----------- 153 + + + L + D A+ +V Sbjct: 142 RFDDSKIAEILSGKKGNEIKTAIMDHLPEYEEFFDEVKTQKGAKEIVDSIIKDMPISQLE 201 Query: 154 --------------------MPVLRLRDARFMRRIRNGT------------VPNVPNVEV 181 + ++D + + + V+ Sbjct: 202 EKDVKLPIPEAIIKTLMPEPYYIQAVKDINDDVKTKESATFGKIISLFHKEIEGSKPVKD 261 Query: 182 TARQLDFLARELSSHPQNLSDGQIR-QGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 + + S R + + + +L+ Y E + + + Sbjct: 262 IVESFGKITTLFNRPDNRESRPDKRLKEVKDIEKLVNAYLKENFPSSSLEFYIPPIELKD 321 Query: 241 QRS---WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKG---------------TLRL 282 S D +ID G R + L + ++ K Sbjct: 322 ILSTTQIYIDDGTRGLIDSKGDGLKRAVTFSLLRSYVEMKRRSKLLDSLDSEEADPQNEE 381 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLLN--LLPLQRIATTNSGELLSLTPVEHVCRLV 340 + L L E+PE LHP V + L+ Q + TT+S S T ++ Sbjct: 382 NPSQPYLFLFEEPELYLHPAAQKVLFDALSIISESNQVVVTTHSPIFFSSTSTNTFIKMK 441 Query: 341 RE-SSRVAAWRLGPSGLSTEDSRR---ISFHIRFNRPSSLFARCWLLVEGETETWVINEL 396 + + + ++ N ++ FA +LVEG+++ + N + Sbjct: 442 KVYEKDIKPYSASICIDLHNNTTNRDLFQLICYENNCAAFFASRVVLVEGDSDVYFFNHV 501 Query: 397 ARQC--GHHFDAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGD 440 A+ F+ + I +I+ G ++ KF IE H ++D D Sbjct: 502 AKTLNSDWDFNRKNIPLIKINGKGSVQRYRKFFNAFEIEVHAILDLD 548 >UniRef50_Q5Z006 Putative uncharacterized protein n=1 Tax=Nocardia farcinica RepID=Q5Z006_NOCFA Length = 605 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 95/617 (15%), Positives = 187/617 (30%), Gaps = 83/617 (13%) Query: 1 MILERVEIVGFRGINRL-SLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M LE+ + GFR + + + + ++ G N GK A L+ D + +D Sbjct: 1 MHLEKYSVRGFRSLADVTDIPIGSPTIVAGPNDGGK----SAALSALAFLLDSHQLTEED 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLE-------------ACWTPCTDG 106 + G+ GR ++ FR + R + W P D Sbjct: 57 RCYLSGESGGRCEITEVVGDFRVDGWEQERFGLPPAIRLRRCAEADLAPRYEIWGPVPDD 116 Query: 107 -------------YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVED-INDQARHLVR 152 + + +SA + L+ +L + G + LV Sbjct: 117 EELRDLNGKMVPELKALATKFGHQSAGKLTKPKLQEWLLEYGREHSSSKGWSGMPPALVD 176 Query: 153 LMPVLRLRD------ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIR 206 +P + + +R + + E ++ L + + + Sbjct: 177 RLPRIAEFEGHAADPESAIRTALSLRFKDYVAEEDVQGRIHELETS-ARERMRIEAKPLA 235 Query: 207 QGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVIL 266 + + + E + +D G S I Sbjct: 236 DHIIERCTDIANVTVEPDVSFT------GTLRSTTLRLERATGEQVRLDHSGRGSLNRIS 289 Query: 267 LGLFATLLQAKG-------TLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP---- 315 + ++ + + ++ ++P+T L ++ Sbjct: 290 MAVWEGTTELLAEPDSDTVDPEAGPQVQVIVAYDEPDTHLDYHFQREVMGIIRRQAMADH 349 Query: 316 LQRIATTNSGELLSLTPVEHVCRLVRES-SRVAAWRLGPSGLSTEDSR--RISFHIRFNR 372 + + T+S L+ + V L + R RLG + + D I+ + Sbjct: 350 VSVVVATHSMNLIDGVDIRDVVLLRLDDTRRTVMQRLGSAEHTEFDRHLGAIAAAVGLRN 409 Query: 373 PSSLFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVIEFAQ-SGLKPLVKFARRMG 430 L RC+L VEGETE V+ L G A GI + G L + + Sbjct: 410 SVLLHERCFLAVEGETEQLVMPVLFGVSEGMSLQAAGIALWACGGNDGALRLASYLHKHN 469 Query: 431 IEWHVLVDGDEAGKKYAATVRSL---LNNDREAEREHLTALPA-LDMEHFM----YRQGF 482 +L+D D + + L D E + + + ++E + + Sbjct: 470 RSVMLLIDADSENSSRIFSQKGLSGHFGQDMEKIVKMVGQMSGVRELEGLFDDVTWARTA 529 Query: 483 SDVFHRMAQIPENVP--MNLRKIISKAIHR----------SSKPDLAIEVAMEAGRRGVD 530 ++ + R + K S A+ R S KP + +EV + R D Sbjct: 530 NEAWPRDGGWTPEDFAVLRKEKKFSAAVERLLKENSDQPPSGKPAMLLEVVVRLKHR--D 587 Query: 531 SVPTLLKKMFSRVLWLA 547 +P L+ +F+ + LA Sbjct: 588 EIPRELRDVFADLRKLA 604 >UniRef50_C8X700 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C8X700_NAKMY Length = 582 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 82/566 (14%), Positives = 167/566 (29%), Gaps = 54/566 (9%) Query: 1 MILERVEIVGFRGINRLSLMLEQ---NNVLIGENAWGKSSLLDALTLLLSPESDLYHFER 57 M + RVEI F+GI R + LIG K++LL+A+ L L+ + Sbjct: 1 MRIRRVEIENFKGIKRADWRVPADKTFFCLIGPGDSSKTTLLEAIHLALT-DRWNLSIND 59 Query: 58 DDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYR----PLEACWTPCTDGYHRIFYR 113 DF+ + + ++ + +H + + + + G Sbjct: 60 TDFYDG---DTSTSIIIRVTVSDLPAEMLQHSLLGFHLSGVNSDGEYQHDPQGDFLPCVI 116 Query: 114 LEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTV 173 ++ + ++D D +G I R + D R ++R Sbjct: 117 IQLKLSKDVEPSWTIFRPDHEGE---FAPIGAGVRRRFDVFKA----DDRIDIQLRWSKA 169 Query: 174 PNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG-QARYRL 232 + + + + + L A+ ++ ++ G G A R Sbjct: 170 SALSRLTDSTHGATGTLAAAVRAAREAVFNSVTPELQALTGKIQDEVNKLGTGSFANMRP 229 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 + L N + G + R+ + T ++ + +LLI Sbjct: 230 GLDNSLTTSGGNLALFEGNVPMTNYGLGTRRLAGIA----------TQQMAVEKGAVLLI 279 Query: 293 EDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR 350 ++ E L P L L Q TT+S + + + V A Sbjct: 280 DEIEHGLEPHRLVHLLRHFAKNPLECQIFVTTHSSIAVEQLQATDLVIVRSSRGEVDAKS 339 Query: 351 LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIK 410 + + +R + AR ++ EG+TE ++ L RQ + G Sbjct: 340 VSAG------LEGVQAGLRAGPS-AFLARRIVVAEGKTEHGLLLGLTRQWDETRSSAGYA 392 Query: 411 VIEF---------AQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 + S K + +G + VD D+ A A Sbjct: 393 PLAALGSTIQDGRGGSTAPTRAKLLQGLGYSTALFVDHDDPSIDNAVQA------TARAG 446 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVA 521 + L E + + + + + V ++ +I+ + V+ Sbjct: 447 SLVVRWEAGLATEDQLVASMDASLLTDLLVLAGRVRVDEETVIADLNRVMTDSVSTTSVS 506 Query: 522 MEAGRRGV-DSVPTLLKKMFSRVLWL 546 + D+ + K + W Sbjct: 507 EWLDQGVPIDAAREGISKAAKKYKWF 532 >UniRef50_B7R7C0 Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C0_9THEO Length = 376 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 123/382 (32%), Gaps = 66/382 (17%) Query: 218 HYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAK 277 + ++ M AS+ ++ R +D +D G + +ILL L + A Sbjct: 2 SIDFKPFTPSNYFKTMHILASDPNQNRRDID-----LDELGEGTRNLILLALLRSY--AV 54 Query: 278 GTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL---PLQRIATTNSGELLSLTPVE 334 + ++ R +L +E+PE LHP + +L + LQ I +T+S + + Sbjct: 55 NLRQYGEEIRGILALEEPEIYLHPQAQRNLFRILREIVSTGLQVIISTHSNNFVDTEFFD 114 Query: 335 HVCRLVRESS-------RVAAWRLGPSGL---------------STEDSRRISFHIRFNR 372 + + + + + L + + Sbjct: 115 SIGLVRKVDDPENKGCQHTTLTLVSKAELVEHCYRTGVPEGKATIENITEYYKSTSNYRL 174 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKP-LVKFARRMGI 431 + FAR +LVEGETE + E G + D +G+ VI P + + I Sbjct: 175 NEAFFARFLILVEGETEELALPEYLAAVGLNCDQKGVSVIAVQGKNQIPKYWRLFGKFKI 234 Query: 432 EWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFS-------- 483 V D D+ G + +N + ++L + L +E ++ + + Sbjct: 235 PMLVFFDNDDDGVDAKGS-----DNQKRKSNKNLASCFGLQLEQILHGKAWDVVTSENEP 289 Query: 484 --------DVFHRMAQIPEN----VPMNLRKIISKAIHRSSKPD--------LAIEVAME 523 F + + I + H KP +A +A Sbjct: 290 ATPIVILGKEFETAVKQDYENTRTERTPTYEKIEEEAHNIIKPVSKNQAKGLIARYIARR 349 Query: 524 AGRRGVDSVPTLLKKMFSRVLW 545 D P +K++ V Sbjct: 350 IHSFMPDYAPQFVKRIAEIVKE 371 >UniRef50_Q3IVS1 Putative uncharacterized protein n=2 Tax=Rhodobacterales RepID=Q3IVS1_RHOS4 Length = 532 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 76/535 (14%), Positives = 169/535 (31%), Gaps = 44/535 (8%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M ++R I +R + + ++ ++ NV++G N GKS+LL+A+ L L+ + + + + Sbjct: 1 MFIQRAVIRNYRCLKQANVTFNDKLNVIVGNNECGKSTLLEAIHLALTGQLNGRPLQIEL 60 Query: 59 -------DFWFPPGDING-------REHHLHIILTFRESLPGRHRVRRYRPLEACWTPCT 104 D + + + L +L L+ Sbjct: 61 HPHLFNLDLVLEYIEALKAGRAPAPPSILIEVYLADDPALTKLKGNNNTLGLDLPGVALL 120 Query: 105 DGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARF 164 + + + D S + D + + ++ L L Sbjct: 121 IDLNPAYAEDFAQYVSDPSEIRTIPMEYYWIKWRDFAENDILNSRVIPLHASLIDASTIK 180 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG 224 + V ++ +T+++ LA + + A+ L + Sbjct: 181 NNAAASRYVIDIVKESLTSKEKVDLALTYRLMKDRFLE---EPKVKAINDALAAKKGKIS 237 Query: 225 A-GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + RA+ E +LD I + G ++ I L + Sbjct: 238 DKVISVSLDTSARANWEAGIMPHLDDIPLPLVGKGEQNSVKIKLAM------------ET 285 Query: 284 KDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVR 341 ++LIE+ E L L+ + Q TT+S +L+ VE V +R Sbjct: 286 SAKSHIILIEEAENHLSYASLNELIGHIAANAGSRQIFITTHSSFVLNKLGVESVLLFLR 345 Query: 342 ESSRVAAWRLGPSGLSTEDSRRISFHI-RFNRPSSLFARCWLLVEGETETWVI-NELARQ 399 + + L ++ + + + A+ +LVEG ++ ++ + Sbjct: 346 GEG------VRLTDLKDRTTQNYFMKLPGHDTLRLILAKRSILVEGPSDELIVQRAYHMK 399 Query: 400 CGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDRE 459 G +G+ VI K ++ A + ++ D D LN+D Sbjct: 400 HGKMPLEDGVDVISVNSLAFKRFLEIAVLLKKTADIVTDNDADVAALEKKYAEYLNSD-I 458 Query: 460 AEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPE-NVPMNLRKIISKAIHRSSK 513 + ++ A +E + ++ + + + + +I K Sbjct: 459 VKIQYDKDETAHTLEPQLVKKNGLATINAVLGKAFADEASAIEHMIKYKAETGLK 513 >UniRef50_UPI0001694BEA putative old protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694BEA Length = 626 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 77/586 (13%), Positives = 165/586 (28%), Gaps = 107/586 (18%) Query: 1 MILERVEIVGFRGI---NRLSLML-----EQNNVLIGENAWGKSSLLDALTLLLSPESDL 52 M + + I F+ I ++ +IGEN GKSS+L+AL L + Sbjct: 1 MRINELIIKNFKNIGTEKPCKIVFPVEDDSDLISIIGENNIGKSSVLEALRLFMPGYVST 60 Query: 53 YHF-------------------------ERDDFWFPPGDINGREHHLHIILT-------- 79 D + L + T Sbjct: 61 PDLNMFPFRREPQSADHYMEICVTFGGLTEQDLNHKYIKPYVYDGVLRVKRTWSGTGLKD 120 Query: 80 -------FRESLPGRHRVRRYRPLEACWTPCTDGYHRIF--------------YRLEGES 118 F + + + + +R + + Sbjct: 121 SEVPFEVFIPNRYIEELSDKKTWNAKTFASLSRDLNRQYELYCTRKGLSAGETITKANQE 180 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMP--------------VLRLRDARF 164 V + L + P + N A +MP ++ Sbjct: 181 DFVEFVYENNAGLIMESEPKWQPNPNGFASKFRSIMPKVIYVPAVKLAEEEASAQKNKSA 240 Query: 165 MRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQ-NLSDGQIRQGLSAMVQLLEHYFSEQ 223 I + N +Q + + + + +IR+ + Q L+ Sbjct: 241 ANLIVSALFDRYLNTSGEIQQFQSAIQAIRNLFSGETAHDEIRRIQDRITQKLKRVIEAD 300 Query: 224 GAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLD 283 + + + + G + R+++L L + + + Sbjct: 301 VEFDFTPPEVMDKLHLNSNILIKYNDFRTAPEHQGNGAQRLLILSLLEMMAEYIKESSQE 360 Query: 284 KDAR----PLLLIEDPETRLHPIMLSVAWHLLNLLP----LQRIATTNSGELLSLTPVEH 335 ++ L LIE+PE LHP + + L + Q + T++S + ++L Sbjct: 361 TESEWQRSFLFLIEEPEIYLHPQLQRKMRNALVSISKSSHAQVVCTSHSEQFINLADRHQ 420 Query: 336 -VCRLVRESSRV-AAWRL------GPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGE 387 + ++++ ++ G + D R+ + + + FA +LVEG+ Sbjct: 421 GIVLFKKQANGTAKCIQVTGNIYEGETKKDQRDRMRMLLNFTSSTLEAFFAERVVLVEGD 480 Query: 388 TETWVINELARQC---------GHHFDAEGIKVIEFAQS-GLKPLVKFARRMGIEWHVLV 437 E I ++ + + I ++ K R GI+ +++ Sbjct: 481 CEVASIYAISNKLKEIYPDKIEDINQLLHSICIVPCNGKLTQLAFFKVLRHFGIDSYLIH 540 Query: 438 DGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFS 483 D D G ++ N +E + E ++ Q +S Sbjct: 541 DLD--GHLPNEGNNKIILNGIGSEEY--RYTHDPNFEGDIFDQYWS 582 >UniRef50_C9LL80 Putative uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL80_9FIRM Length = 543 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 72/494 (14%), Positives = 136/494 (27%), Gaps = 84/494 (17%) Query: 1 MILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + V I +R ++ + + N ++G+N GKS+ L L + Y F D Sbjct: 1 MYISDVRIENYRTFQDVTFHFDSRANYIVGDNNIGKSNFLS----FLKTVTHGYGFREAD 56 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 F + + + T + G ++ + Sbjct: 57 F-------LDENNPIRVFFTLSSADMGTGEFAHI------------ELRQLVSEVVPTLI 97 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + G + +E + L V R + + + Sbjct: 98 NSDT-----------GERLPLEYMRCLFYIDYALDDVPRNMVTDEELLQISSLYKDYLSA 146 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 + P +L + + + +G + + Sbjct: 147 GEETIREAEELLAKKGLPVSLPSDPNLAVVKILKVIFTSDKDAAPSGFTIRLMFAIASHL 206 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + + + +L I++PE L Sbjct: 207 LVQLVEKRNSKAIPFEN------------------IIVYNKWGKRFFPLVLSIDEPELHL 248 Query: 300 HPIMLSVAWHLLNL---------------------LPLQRIATTNSGELLSLTPVEHVCR 338 HP + L L Q T+S + L + + R Sbjct: 249 HPYLQRAVLAFLQSILNNEEPFFKKLIQRTLGVDGLDGQLFVVTHSTDSL-VNDYRQIIR 307 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRP---SSLFARCWLLVEGETETWVINE 395 L + G + + I H+ + P +L++RC +LVEGETE Sbjct: 308 LYWNEEKKVQVSCGTTFHFNRE---IEKHLIMHFPEVKEALYSRCTILVEGETEYGSFPY 364 Query: 396 LARQCGHHFDAEGIKVIEFAQ-SGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLL 454 A+ G +FD GI +I S + + + RR I L D D + V Sbjct: 365 FAKTLGINFDYYGICLINARGESSITKISQLIRRFHIPTVCLYDKDVMVENPKPYV--FY 422 Query: 455 NNDREAEREHLTAL 468 + E + + A Sbjct: 423 TDYICYEMDVVQAC 436 >UniRef50_UPI0001C41A1B RecF/RecN/SMC N terminal domain-containing protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A1B Length = 566 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 74/569 (13%), Positives = 166/569 (29%), Gaps = 53/569 (9%) Query: 2 ILERVEIVGFRGINRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYH------ 54 +L ++I FR + + NV+IGEN GK+SL+D+L +L + + Sbjct: 1 MLINIKIKNFRSLKDFEMNFNPGLNVIIGENDAGKTSLIDSLKILFGLKKIDINDYNEVG 60 Query: 55 ------FERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 + +F + + ++ R ++ Sbjct: 61 CPITIALDESNFHYCLESRIVEDTVVNTFYLKPTEDKINEMKTRLNGMDELKEAEARKML 120 Query: 109 RIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR--DARFMR 166 + + + S S+M + D + + + D+ F Sbjct: 121 KEYCSIFDISYRSNSIMENLKSKILESMESDEYTKVKSFSYPISFLGSREFENIDSFFEN 180 Query: 167 RIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAG 226 + N+ + + L+ + +N Q + L+ + + Sbjct: 181 TFFKELKEEIWNIHIGDKTLNQHIDDYIEEFKNEQLS--NQDAEELNAQLKEFMPDFKEI 238 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 + + + MI++ G + R + +F Sbjct: 239 NPIVNPSAKLSLDVDVEILNSSGQRIMIEKMGDGTNRRTTMAIF---------KHKKDKK 289 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLL---NLLPLQRIATTNSGELLSLTPVEHVCRLVRES 343 + + ++ ET LH LL Q I TT+S L++ + + + + Sbjct: 290 DLVYVFDEIETHLHIKAQLDILKLLKDLTKENKQIIITTHSPFLINQVNLNEIHLMSIDK 349 Query: 344 SRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ-CGH 402 + S E+S+ ++ N F L+VEGE+E I + + G+ Sbjct: 350 ETGSKVSTLNSS---EESQVALSNLGINNIDLFFTNKLLIVEGESEQNFIPIMYEKIYGY 406 Query: 403 HFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAE 461 IK+++ P ++ ++ + + V D + + Sbjct: 407 PISQNFIKIVKADGIRDIPNFIRVIKKSFSKTDIFVLMDNDADELTEERIEKMVEGDLIH 466 Query: 462 REHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNL-------------------RK 502 R+++ + ++ E + + Sbjct: 467 RDNIFEIGDVEFEDTFSDDILRQALSQYMSDTLGYAVEASMRDIQNARHSDKFSKVLGEA 526 Query: 503 IISKAIHRSSKPDLAIEVAMEAGRRGVDS 531 + KP A +AM A + +D Sbjct: 527 FNRRTYKNFKKPLFAQYLAMFAEKEDIDE 555 >UniRef50_D1RHV6 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHV6_LEGLO Length = 638 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 90/634 (14%), Positives = 182/634 (28%), Gaps = 96/634 (15%) Query: 2 ILERVEIVGFRGINR--LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 L + I + L + L++ L+G+N GKS++L A L + D Sbjct: 8 KLVSMTIRNIGCVGNDGLEIKLDKIVCLVGKNNSGKSTILRAYELAKGSVQFD---KERD 64 Query: 60 FWFPPGDINGREHHLHI-----ILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + + E L + I E +++ W + RI Sbjct: 65 RYQLATEEQSSEIILEVHIPKNIGNVDERWKTEQDGLLI--VKSIWQWEAPDFQRIRKTW 122 Query: 115 EGE---SAEDGS------VMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFM 165 + E A+DG V + R ++ D + + L P++ L Sbjct: 123 DPESQNWADDGKAGGADPVFSSRLPRPLRIGSLEDADKTQEILLNLALTPLVDL----LK 178 Query: 166 RRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGA 225 + N + Q+ L+ H ++++ +I G + L+ + A Sbjct: 179 KEQNNNESELAKAIANVTAQISTLSTSHQDHFNSIAE-RITSGFQNVFPSLDVTLNIATA 237 Query: 226 GQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKD 285 + N +++ G + R + + + + Sbjct: 238 P--LTPNVSDLIKKGSGLRIKDGRANTSLNQQGTGTRRALFWAMLQVYNELTREKESREK 295 Query: 286 ------------------------------------------------ARPLLLIEDPET 297 LLLI++PE Sbjct: 296 QIKELNTQLTKAQKKSPHGSDEILELQKKLSSLENNDPLPNDADDPALPGYLLLIDEPEN 355 Query: 298 RLHP----IMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEH-VCRLVRESSR------V 346 LHP + L Q + TT+S ++ + RL R + Sbjct: 356 ALHPMAARAAQQHLYKLAENPDWQVMITTHSPYFINPFEDHTTIVRLDRTNYERELPWQP 415 Query: 347 AAWRLGPSGLSTEDSRRIS--FHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHF 404 +R ++ +R+ HI + F +LVEG+TE + H Sbjct: 416 KIYRSDTITFEEDEKQRLQALQHIDPSFAEIFFGSYPILVEGDTEHAAFIAAIIEKKHEL 475 Query: 405 DAEGIKVIEFAQSG-LKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAERE 463 E + +I L PL+K + I++ +L D D K N++ Sbjct: 476 -MEQVTIIRSRGKAILAPLIKVMKHFKIDFGLLHDCDPPYTKSGNKNGMWTENEKIRNSI 534 Query: 464 HLTALPALDMEHFMYRQGFSDVF---HRMAQIPENVP--MNLRKIISKAIHRSSKPDLAI 518 + + H + F P N + +S+++ + + + Sbjct: 535 LSARNDGITIRHRVSFPDFERFLGCDEESKDKPLNAYRNITTDNKLSESVQKLLEELINS 594 Query: 519 EVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD 552 + T + + ++ A+ + Sbjct: 595 TQYEPFPDGFLSDNKTYNEFLLEKITQWAKDNGN 628 >UniRef50_A6LLZ6 ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LLZ6_THEM4 Length = 616 Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 81/627 (12%), Positives = 199/627 (31%), Gaps = 87/627 (13%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + +V + FR R + +E V IG N GKS++L+A+ + ++ + E +D Sbjct: 1 MKIAKVILENFRAFYGRNEIPIEDFTVFIGRNDQGKSTILEAIDIFINDGKGVTKIEEND 60 Query: 60 FWFPPGDINGR-----------EHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYH 108 + ++ I T +L + + + LE Sbjct: 61 LNIKAKNEGNEIFKIGVCFKDLPENIVIDATNTTTLQNEYLLSKEGFLEIYKVFKNGKLQ 120 Query: 109 --RIFYRLEGESAED-------GSVMTLRSFLDKDGH----------------------- 136 + R + + + L++F+ + G Sbjct: 121 NKETYIRCMHPANDSFLEGLLKKKITELQNFVREKGPDCLDLRKSAELRKCIRDYYKSKD 180 Query: 137 ----------PIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQL 186 I+ E + D L + +P+ L + ++ + + +V Sbjct: 181 GDLVLKEIDLKINEEGMKDIWLQLEKCLPIFSLFHSDRPNTEQDSEIQDPLKTKVDEIFK 240 Query: 187 DFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF-SEQGAGQARYRLMRRRASNEQRSWR 245 + D ++++ +A V+ + + + R + + Sbjct: 241 REDIQNKLEEIAKEIDEELKKIANATVEKFRELSQQDTEIKPNIPEVGKLRWKDVYKGIG 300 Query: 246 YLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLS 305 Y + +++ G R++L+ F ++A + + + IE+PET LHP M Sbjct: 301 YNTDNDIPLNKRGSGLRRLVLVSSFLAEIKA--QNESEDNLNVIYAIEEPETGLHPEMQK 358 Query: 306 VAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDS 361 + L L Q + TT+S L+ + V + +E+ + + Sbjct: 359 TLINNLIKLSKNGKHQILITTHSPALIRFFETDSVRYVEQENGKAKVY-----LFDENIG 413 Query: 362 RRISFHIRFNRPSSLFARCWLLVEGETETWVI-------NELARQCGH--HFDAEGIKVI 412 +I + + + VEG + + EL ++ I +I Sbjct: 414 GKIVKELGLLPN---IGKVVICVEGTNDKNFLMNINQNIPELMEIIDLKEKIESGLISII 470 Query: 413 EFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 S L + D + ++ + + + Sbjct: 471 PMQGSNLNEWIDCYALKNTNVVEFHLYDRDCDEKYKKAVE--EVNQRKDGSYGVLTTKRE 528 Query: 473 MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAI-----HRSSKPDLAIEVAMEAGRR 527 +E+++ R+ + ++ + +++ K + + + + K L ++ + ++ Sbjct: 529 IENYIPRRLIEGSLNIKIELDDWDNIDIPKKVKEKVTRFSDEKDVKNYLCGSLSKKITKK 588 Query: 528 GVDSVPTL--LKKMFSRVLWLARGRAD 552 ++ + +K F ++ L D Sbjct: 589 DLEDLNAWDEVKSWFEKIKELCSKSFD 615 >UniRef50_B2DN28 RecF/RecN/SMC N domain protein n=2 Tax=Streptococcus pneumoniae RepID=B2DN28_STRPN Length = 529 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 72/555 (12%), Positives = 164/555 (29%), Gaps = 40/555 (7%) Query: 2 ILERVEIVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 ++ R+ + F+ + + N+ +GEN GKS+LL + L+LS Sbjct: 1 MISRIILQNFKRYQNVDFTCNSEVNIFVGENGAGKSTLLYGIGLVLSGSHSQIE------ 54 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES-A 119 I +E L + T + + Y + + ++ Sbjct: 55 RSSLSSIINQEAILEFMGTRDINQLPEVFIEIYFDELSTEISSNFNIEGKHNSQKIKAFG 114 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 ++ + ++ + ++ R+ + + ++ N Sbjct: 115 LSLKIIPNQDYIAEITSVLNDSKWTVFPFEFYRVEFLTFSGKTYSSYNKPYKFLHSMINT 174 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMV----QLLEHYFSEQGAGQARYRLMRR 235 + Q + R + N+S + L+ ++ + Sbjct: 175 SLIDTQQEIQKRIHEVYLDNISAENRAKVNHQYRINSFNFLKTLRKDELLKENASEFQLH 234 Query: 236 RASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 +E + + +D +LLG+ K T++ +LLIE+P Sbjct: 235 FDESENSFRNSVSAVKNGVDIKNLGQGEKVLLGVENAYSHLKETVK-------ILLIEEP 287 Query: 296 ETRLHPIMLSVAWHLLNL-LPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 E L L +L+ +Q T+S + S V+++ L Sbjct: 288 ENHLSFQNLQKLVRMLSSNTGVQVFIGTHSNMIASRLGVDNLLFLDNGQ------ISKLK 341 Query: 355 GLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVIE 413 GL + R N + + +LVEG E ++ + + + +I Sbjct: 342 GLKKDTVRFFKKSTNQNLLNFSLGKKIILVEGNAEYILVEKFFEILHSKKPEEFNVSIIS 401 Query: 414 FAQSGLKPLVKFARRM-GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 + ++ A + V+ D D + + S + + Sbjct: 402 VDGLSFERYLEIATNFTDKKVVVITDNDGDYESKVQSKYSSYQQFQNIKVSSDLDNDNRT 461 Query: 473 MEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDS- 531 E +Y SD+ N + K + A+ + + + Sbjct: 462 FEICIYNCN-SDLLESSGLTKSNDLL--------EYMLREKAEFALRLLEQMETDNIREK 512 Query: 532 --VPTLLKKMFSRVL 544 +P +K+ ++ Sbjct: 513 FIIPNYIKEAIEWII 527 >UniRef50_C7RGV9 Overcoming lysogenization defect protein n=6 Tax=Bacteria RepID=C7RGV9_ANAPD Length = 696 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 70/603 (11%), Positives = 177/603 (29%), Gaps = 96/603 (15%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYH----- 54 MIL+++++ FR + L ++ +++IG+N GK+S + L +L+ + Sbjct: 1 MILKKMKVKNFRLLKNFELNFKDELSLVIGKNNCGKTSSIIVLDKMLNSSKLFWEDINLE 60 Query: 55 ---------------------------------FERDDFW---FPPGDINGREHHLHIIL 78 + +D + ++++ I+L Sbjct: 61 CQKDLYKKIIGFDITKLDEVQLLETINMQLFIEYNDNDSYENIQKFMMDLNPDNNI-IVL 119 Query: 79 TFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPI 138 F + + + + + + + E Sbjct: 120 EFISVIAAKKIIELKNIISEKNIEDFKSFSKFMSKNFANFFETKKYSRGFDVEANKTTQD 179 Query: 139 DVEDIN-DQARHLVRLMPVLRLRD----------ARFMRRIRNGTVPNVPNVEVTARQLD 187 E+I+ + ++++ + R + + + E +L+ Sbjct: 180 RSEEIDNKDIQKVIKVAGIRADRAVSNDDRNHVLSGLTGKYFSSYKAAKDESESVFTRLE 239 Query: 188 FLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQG---------AGQARYRLMRRRAS 238 E + +G+ +G + + + + Sbjct: 240 EKLEEADKELYKIYNGEKSEGEEPIDGIFSDVIDVIKTYGGAENGIDIAIESSISEKNLL 299 Query: 239 NEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETR 298 ++ + Y + + + L+G+ + L LL IE+PE Sbjct: 300 SDNTNLSYRQGGDYSLPETYNGLGYLNLIGILFEIETNIQELFEQPADINLLYIEEPEAH 359 Query: 299 LHPIMLSVAWHLLNL--------------LPLQRIATTNSGELLSLTPVEHVCRLVRESS 344 HP + + + LQ + T++S ++S + + L + + Sbjct: 360 THPQLQYIFIRNIKSHIKAHRNKLLKEKNKQLQILITSHSSHIVSECNFDDIIYLKKNGN 419 Query: 345 RVAAWRLGPSGL-----STEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQ 399 V A + + + ++ NR FA + +EG+TE ++ + + Sbjct: 420 TVIAKSFNSLKEEYGGDEQKGFKFVKQYLTMNRSELFFADKAICIEGDTERILMPVMMHK 479 Query: 400 CG---------HHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGD--EAGKKYAA 448 ++ I +IE + + +G + + D D +A KK Sbjct: 480 IDNKEKPRADIIPLLSQNISIIEV-GAHSHIFMPLFSFLGTKVLFVTDIDSVKAEKKIDK 538 Query: 449 TVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQ-IPENVPMNLRKIISKA 507 + E T ++ F G ++ + + +N ++ + A Sbjct: 539 NGKERTVYTSCHPDEG-THTSNASIKEFFKDTGIDTSNNQFKELVGKNAEDKIKDNMRMA 597 Query: 508 IHR 510 Sbjct: 598 YQI 600 >UniRef50_B7H4E2 Overcoming lysogenization defect protein n=1 Tax=Acinetobacter baumannii AB307-0294 RepID=B7H4E2_ACIB3 Length = 568 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 65/507 (12%), Positives = 149/507 (29%), Gaps = 60/507 (11%) Query: 1 MILERVEIVGFRGINRLSLMLE-----QNNVLIGENAWGKSSLLDALTLLLSPESDLYHF 55 M + +++ FR I L L+ +++G+N GK+S + E + Sbjct: 1 MHISSIKVKNFRAIKDAELKLDPNQKQDLTLIVGKNNSGKTSFIMVFDKFFKKEDNFNFH 60 Query: 56 ERD-DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRL 114 + I+ II F E + Y + ++++ Sbjct: 61 DFSTHLREKIYKIDSETIEEAIIGLFLEISYSKDDNLEYLSEFIIDLNSKNNTVKLYFEC 120 Query: 115 EGES--------------------AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLM 154 + S + ++ + I+ + + + Sbjct: 121 LIDEERLRNDLINIDKKYKKKFIEKNITSYLIKNLYIYEKDEDIENNKQKLIKKEVSAIN 180 Query: 155 PVLRLRDARFMRRIRNGT---VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSA 211 ++ + R + + ++P +++ + +++ I + Sbjct: 181 SLINYQVIHAKRNLASSETKEKSSLPLSKLSTEYFNKENMFSEKDFIKINNA-ILEMDEN 239 Query: 212 MVQLLEHYFSEQG----------AGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRS 261 + L + +F A + L R+ + +D + Sbjct: 240 LNNLYDTHFEGFFENVRDFLGSTALKVLSNLESRQIMSNSSKVVQIDSEENFLPESLNGL 299 Query: 262 YRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL-----PL 316 + +L L + K + + LL IE+PE HP M + + + L Sbjct: 300 GNLNILYLLLQIDLKKRFFIQEDRSINLLFIEEPEAHTHPQMQYIFSKKIKKIIENIPNL 359 Query: 317 QRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRL-----GPSGLSTEDSRRISFHIRFN 371 Q +T+S ++S E + + V L TE + + +I Sbjct: 360 QTFISTHSSHIVSQCNFEDIRYFHNHNGNVKIKNFYLELEEKYKLQTELFKFLKQYITLY 419 Query: 372 RPSSLFARCWLLVEGETETWVINELARQCG---------HHFDAEGIKVIEFAQSGLKPL 422 FA + +EG +E ++ + ++ I IE + K Sbjct: 420 SAELFFAEKVIFIEGVSEKILLPYFIKNFDEKNKGKQDYIPISSQNITYIEA-GANSKAF 478 Query: 423 VKFARRMGIEWHVLVDGDEAGKKYAAT 449 ++ +L D D G + + Sbjct: 479 QHLLNFFEVKSLILTDIDSVGGENRSA 505 >UniRef50_C9NKQ7 Putative uncharacterized protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NKQ7_9ACTO Length = 622 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 107/626 (17%), Positives = 195/626 (31%), Gaps = 84/626 (13%) Query: 1 MILERVEIVGFRGINRL-SLMLEQNNVLIGENAWGKSSLL---------DALTLLLSPES 50 M L + GFR + + + + + +L G N GKS+LL AL + Sbjct: 1 MHLNSFNVSGFRSLTEVSDIPVRKPTILAGHNDGGKSALLDALAFLLGKHALA---EDDR 57 Query: 51 DLYHFERDDFWFPP-GDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHR 109 + D+ P + + E + +E R+R R + + Sbjct: 58 TYLTIDGDEVSAPLRCEESIVEGVFTLDAWEQEQFDLPERIRLRRCCGEDLISRLEVWQP 117 Query: 110 IFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMR-RI 168 I V L+ + + G D + L R D Sbjct: 118 IPADERLRDLSQHLVPALKELVKEFGLSPGSMRKPDLEQALRRYGRDHAGSDGWVAAPTA 177 Query: 169 RNGTVPNVPNVEVTARQLDFLARELS--SHPQNLSDGQIRQGLSAMVQLLEHYF-----S 221 + +P + + D + + ++D ++ LSA+ ++ S Sbjct: 178 LDKRMPRYLPFDGKVAKPDEAVKTVLVGRFQSYMADPDLKGRLSAIEDEVQDRLRIDAKS 237 Query: 222 EQGAGQARYRLMRRRASNEQRSWRYLDIINRM-----------IDRPGGRSYRVILLGLF 270 + R +++ + + S++ + +DR G S R I L ++ Sbjct: 238 LCEHIEMRCPDLQKVSVDPDVSFQQGFKAAPLRVARRAGEVVGLDRTGLGSNRRISLAIW 297 Query: 271 ATLLQAKGTLR-------------LDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--- 314 + + + +++ ++P+T L I L+ Sbjct: 298 EWTSELLAEEQGTAPAMSTCDEAPEPPPVQTIVVYDEPDTHLDYIHQRKIMQLIRTQSKI 357 Query: 315 -PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLS---TEDSRRISFHIRF 370 + + T+S L+ + V L E R RLG L E +I+ + Sbjct: 358 PNVSVLVATHSMNLIDGVDISDVVHLKLEDHRTVVERLGTGLLHDAIDEHLGKIAATVGL 417 Query: 371 NRPSSLFARCWLLVEGETETWVINELARQC-GHHFDAEGIKVIEF-AQSGLKPLVKFARR 428 L RC+L VEGETE L R C G A GI + G L ++ + Sbjct: 418 RNSVLLHERCFLAVEGETEQRAFPLLFRLCEGLSLQAAGIALWACFNNEGALHLARYLVK 477 Query: 429 MGIEWHVLVDGDEAG-KKYAATVRSLLNNDREAEREHLTALPALD---------MEHFMY 478 G ++VD D K L R ++T L D +E Sbjct: 478 QGRTIMLVVDADSRNVSKGIFKTPKLTQFFGTESRRYVTFLGEPDDAQQEKYNELEELFE 537 Query: 479 RQGFSDVFHRMAQIPENVPMNLRKI-----------------ISKAIHRSSKPDLAIEVA 521 ++ + +++ KPD+ E++ Sbjct: 538 DDVWARIANKVWARAGTPWQPADFTALRGQGKFSGAVQEMLQEQSESGPGGKPDMMYELS 597 Query: 522 MEAGRRGVDSVPTLLKKMFSRVLWLA 547 M D VP L+++F R+ LA Sbjct: 598 MALDD--PDDVPEQLRRVFERLRELA 621 >UniRef50_A1SXR8 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXR8_PSYIN Length = 541 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 76/569 (13%), Positives = 170/569 (29%), Gaps = 56/569 (9%) Query: 1 MILERVEIVGFRGI-NRLSLMLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M +ERV I ++ + S+ + N+L+G+N GKS++L+A L+LS + + + Sbjct: 1 MYIERVNIYNYKCYYGKFSIEFNKGVNILVGDNGSGKSTILEAANLVLSGILHGKYLKNE 60 Query: 59 DFWF---------------PPGDINGREHHLHIIL---TFRESLPGRHRVRRYRPLEACW 100 + G E + +I +F + ++ R + Sbjct: 61 LSQYLFNCKAVSEYLTQVNDGGSTTLPEICIEVIFNKDSFPKFQGTGNKGRNDACGVSFK 120 Query: 101 TPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR 160 D Y + L + ++ + D + + + VL Sbjct: 121 VEFDDSYTEEYSELIKSGGKLKTLPIEYYKV-----SWTSFDRDSVTSRSIPIKSVLIDS 175 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYF 220 + + + + + E+ ++ L++ + ++ V+ + Sbjct: 176 SSNKYQNGSDVYISRIIRNELENKEKVKLSQAYRKMKDSFTE-------EEAVKRINEQI 228 Query: 221 SEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTL 280 + Q + + S + L I ++ L K Sbjct: 229 DNKSKVQGEHLNISVDLSTQNSWESSLMTYLGDIPFHQVGKGSQCVIKTNLALGHQKTKE 288 Query: 281 RLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCR 338 LLLIE+PE L L+ + Q I +T+S + + +E++ Sbjct: 289 A------SLLLIEEPENHLSHSKLNYLLKEIINGVSDKQVIISTHSSFVANKLGLENLLL 342 Query: 339 LVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINE--L 396 L LS + + + + +LVEG+++ + + Sbjct: 343 LNDH------KVTRFKDLSKDTFDFFKKLPGYQTLRLILCKKAVLVEGDSDELIFQRAYM 396 Query: 397 ARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNN 456 G G VI + K ++ A ++ + V+ D D + Sbjct: 397 DANNGVLPIEHGFDVISV-KLTFKRFLEIADKIDKKVAVITDNDGEYANTITKKYKDYHK 455 Query: 457 DREAEREHLTALPALDMEHFMYRQGFSDV--FHRMAQIPENVPMNLRKIISKAIHRSSKP 514 +E + + ++ + K+ K ++ K Sbjct: 456 HAHISIFADNRNNLNTLEPQFADANKDALPILCKALELNVKNFDTVEKLSEKL--QTQKT 513 Query: 515 DLAIEVAMEAGRRGVDSVPTLLKKMFSRV 543 +++V S P + K Sbjct: 514 SWSLKVFESKYN---FSYPEYITKTVEWC 539 >UniRef50_B1KR76 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=B1KR76_SHEWM Length = 773 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 72/567 (12%), Positives = 160/567 (28%), Gaps = 110/567 (19%) Query: 1 MILERVEIVGFRGINRLS-----------------------LMLEQNNVLIGENAWGKSS 37 M LE + I +R ++ ++IG+N GK++ Sbjct: 1 MYLESLTIKNYRKFRDTDNTVCFVKPEVVDMSVEEDQPESSVIAPSTTLIIGKNNAGKTT 60 Query: 38 LLDALTLLLSPE------------SDLYHFERDDFWFPPGDING--REHHLHIILTFRES 83 +++AL +L + E ++L++ + DF +L L + Sbjct: 61 VVNALKMLCNNEQPSASDFNLSYLNELFNQYKQDFEADQLTKFKSLATPNLEFGLRVKVD 120 Query: 84 LPGRHRVRRYRPLEACWTPCTDGYHRIFYRLE-GESAEDGSVMTLRSFLDKDGHPIDVED 142 + P ++ ++ + E G + Sbjct: 121 FNDEDLMTHLAPFIPISEEGNGKPVSVYIVVKVALAEESAFKEEASKIFKATGSEGQELE 180 Query: 143 INDQARHLVRLMP--------------------------------VLRLRDARFMRRIRN 170 N + L+ ++ +++ + R ++ Sbjct: 181 SNQRFEKFYALLSKESSVIQTEGNLYQIVFMDLLGDATEKFSLKKLINIKEIKANRHLKE 240 Query: 171 GTVPNVPNVEVTARQLDFLARE--LSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQA 228 G + +V N V + + ++ L + ++++ I + A + + + Sbjct: 241 GVLSDVFNKIVAFQFANDVSSRSSLEASIESINKK-ISDNVGAKSTDISQVLGKVESTNK 299 Query: 229 RYRLMRRRASNE------QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRL 282 + + E + D D+ G ++ + Sbjct: 300 VNLNLSGNVTYEAIMKGLIKYNFMDDADFIPEDQFGLGYINLLNIIGEIIHFVDSYEENS 359 Query: 283 DKDARPLLLIEDPETRLHPIMLSVAWHLL------------------NLLPLQRIATTNS 324 LL IE+PE +HP M + L Q TT+S Sbjct: 360 HLSRINLLFIEEPEAFMHPQMQEFFIKRIDNAVKKAVEIANASSQDPKTLQCQIAITTHS 419 Query: 325 GELLS-----LTPVEHVCRLVRESSRVAAWRLGPSGLSTED-------SRRISFHIRFNR 372 +++ + L + A L + + D I HI++ Sbjct: 420 SHIVNSKIHSSNTFNSINYLTSINKCTKAINLTDEAVVSSDDSDANKKLNFIKKHIKYKV 479 Query: 373 PSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIE 432 F+ + VEG TE ++N I V + K + A+++ + Sbjct: 480 SELFFSDAVIFVEGITEETLLNYYLENH-QSLSEYYISVFNINGAHGKLYLPLAKKLSVP 538 Query: 433 WHVLVDGDEAGKKYAATVRSLLNNDRE 459 ++ D D +K + + E Sbjct: 539 SLIVTDLDIKREKCEKGEKHKKDESCE 565 >UniRef50_Q1IBB5 Putative uncharacterized protein n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBB5_PSEE4 Length = 568 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 84/561 (14%), Positives = 180/561 (32%), Gaps = 44/561 (7%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 M + V I FR I + + LIG N GK++ + + + + Y + DD Sbjct: 7 MKVTSVRIKNFRTITAEQVINIRDGCTLIGPNNSGKTNAMLGVYYFFTGYDNKYGY--DD 64 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 P + + ++ + + + + L+ + + Sbjct: 65 ERDIPFSHESVKTSITLVFE-ADPKKDKDVLDKIGKLKQMLKSPRTEVSGNSFSI--NVY 121 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 +G + + + + + +V ++ L + N ++ + + Sbjct: 122 FNGQLPVYQIYPGAKKADGKSAQYSTLQKSIVTMV----LDAFQCYYIPSNKSIAQLYDE 177 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 V+ +A L + + +IR+ + ++ + + G + L R + Sbjct: 178 FVSPFVKKKVAEALEPYDE-----EIRKSIQSLTDCMNSALASSGLEGVKTALEYPRNAL 232 Query: 240 EQRSWRYL----DIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDP 295 E + D I G +LL F + Q K + R L LIE+P Sbjct: 233 EHLISGFELMVQDNSRSSIFTKGMGIQSAVLLSSFKWITQQK------PEKRVLWLIEEP 286 Query: 296 ETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGP 353 ET +HP + + +L L I TT+S + V+ V + S A RL Sbjct: 287 ETYMHPSLAYQSSKILEDLASISTVIKTTHSLSFMPQ-SVDSVQGVATSS--TAGTRLQS 343 Query: 354 SGLSTEDSRRISFHIRFNRPSSL-FARCWLLVEGETETWVINELA----RQCGHH--FDA 406 + + I + + VEGET+ ++++A G + Sbjct: 344 YTTMRDATEDIRSSLGVKFSDYFGLTDLNIFVEGETDIDYLSQMAFYYQEAYGDTMIIAS 403 Query: 407 EGIKVIEFAQ-SGLKPLVKF-ARRMGIEWHVL--VDGDEAGKKYAATVRSLLNNDREAER 462 ++ +F L+ ++ + E V+ DGDEAG+K + N Sbjct: 404 LDVQFRDFGGVKELEGFIRANYMHVRKEVVVISVFDGDEAGRKSIKDLHGFYGNKGGFNG 463 Query: 463 --EHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISK-AIHRSSKPDLAIE 519 +++ +E + + + + ++ + +SK Sbjct: 464 NFDYVVIPGKTAIEALFPDEWILSAYELHPSWFVYLIPDAAGGVTDFKLSGTSKKAFKTF 523 Query: 520 VAMEAGRRGVDSVPTLLKKMF 540 V + + + Sbjct: 524 VLELCDQAVDYKFLERFEPLI 544 >UniRef50_UPI0001873D90 hypothetical protein PSPTOT1_4227 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873D90 Length = 724 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 68/467 (14%), Positives = 130/467 (27%), Gaps = 69/467 (14%) Query: 53 YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPC------TDG 106 + E +D D + + I+ T + L + PL Sbjct: 86 FRLEPEDMEDLYVDYRKQRERVEILKTEIQRLAAEGEDPPHLPLWPQSLHDYLNRRLGKM 145 Query: 107 YHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR------ 160 + +YRL+ +D T + + N L+R+ + R Sbjct: 146 FKVRWYRLDPAQLQDPDPRTRSANRQSLSATSVALERNPLIN-LIRVHEINAQRGFGDSA 204 Query: 161 DARFMRRIRNGTVPNVPNVEVTARQ---------------LDFLARELSSHPQNLSDGQI 205 D ++G + + L + + LS Sbjct: 205 DEGHDDGKQSGGRKLSEQLRAYYNRHLDPGDSPDISDLGALRAIEAAQVAFDTRLSTS-F 263 Query: 206 RQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDI---------INRMIDR 256 L + L S+ A ++E LD + Sbjct: 264 EPALKEVAGLGYPNNSDPSIRVATRLAPTDGMNHEAAVLFELDSIGGAPGAPPLRLPETS 323 Query: 257 PGGRSYRVILLG---------LFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSV- 306 G +I + A + L+LIE+PE LH + V Sbjct: 324 NGLGYQNLISMIFRLMAFRDEWLKKFRTADEQSAAGVEPIHLMLIEEPEAHLHVQVQQVF 383 Query: 307 ------------AWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPS 354 L Q + +T+S + +++ R + + ++ S Sbjct: 384 VKHAYHVLCRDPLLERFPNLKSQLMVSTHSSHVAHEVEYQNLRYFRRLPAGMDGVQVPVS 443 Query: 355 GLST---------EDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFD 405 +S + ++ ++R FA +LVEG E ++ R+ D Sbjct: 444 TVSNLSTVFGKKPQTKDFVTRYLRAQHADLFFADAVILVEGAAERMMLPHFLRKHFPFLD 503 Query: 406 AEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRS 452 I +++ S L+ +GI V+ D D + A V+ Sbjct: 504 QCYITILDIGGSHAHRLLPLIDALGIVTLVITDLDAGSLRSAQPVQR 550 >UniRef50_C4FPP4 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPP4_9FIRM Length = 576 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 78/594 (13%), Positives = 179/594 (30%), Gaps = 74/594 (12%) Query: 1 MILERVE-IVGFRGINRLSLMLE-QNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M ++ ++ I +R ++ S++ + N +IGEN GK+++L+ L ++LS F+ Sbjct: 5 MYIKEIKTISNYRNLSGQSMVFDKDLNYIIGENNIGKTNILELLNIILSEG----KFKEA 60 Query: 59 DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGES 118 DF + + T + E + D I Sbjct: 61 DF-------ADLSSPIEVKYTIS------YDDSSIGFFEDNFDINEDNCITIIAE----- 102 Query: 119 AEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPN 178 +D + + D I + L L ++ F + N Sbjct: 103 -QDLIDGRISYYHDTPNKTSISFSIIKKINSLYYFAQRLPSKELDFKGSNGSSKTLNYLI 161 Query: 179 VEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRAS 238 + + ++S N G++ + ++ + + + L R Sbjct: 162 KKSLEIVKLEESDLINSPKINDVIGEVNKSINYINDITGDSVNASLDSSHEKLLARLLIL 221 Query: 239 NEQRSWRYLDIINRMIDRPG------GRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 +Q + + YR +L + +LL+ Sbjct: 222 GDQNGRELTSLGEGIQYAFNIILQIIDAIYRSMLGKTPEEFRERLICSSEKYYFPLILLL 281 Query: 293 EDPETRLHPIMLSVAWHLLNLL---------------------PLQRIATTNSGELLSLT 331 ++PE HP +N L Q T+S +L L Sbjct: 282 DEPEIHQHPYRQRSLMKKINDLLNNKNESFIKLIKGLFNIDGLKGQIFIATHSPNIL-LN 340 Query: 332 PVEHVCRLVRESSRVAAWRLGPSGLSTE-DSRRISFHIRFNRPSSLFARCWLLVEGETET 390 + R+ ++++ + + + H + F++ + VEG+TE Sbjct: 341 DYKQFLRIYKDNATQTIKVASGNSFDLDVKLYKHLLHNFLYLKEATFSKKIIFVEGDTEN 400 Query: 391 WVINELARQCGHHFDAEGIKVIEFAQSGLKPL-VKFARRMGIEWHVLVDGDEAGKKYAAT 449 I A + D G+ VI+ + ++ + GIE + ++D D+ ++Y Sbjct: 401 GAIPIFAEKKKFDLDENGVGVIKLDGADSVKYCMELYKLFGIETYAIIDADKK-ERYHNN 459 Query: 450 VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSD----VFHRMAQIPENVPMNLRKIIS 505 +++ E + + D + + + + I Sbjct: 460 ANIFFTTEKDYEEDVFASFELKDYLTCCKELDILQSMIGIIKKYKRDLDVSKFKEDPSII 519 Query: 506 KAIHRSSKPDLAIEVAMEAGR--------------RGVDSVPTLLKKMFSRVLW 545 + ++K + + + + V +P+ ++ +V Sbjct: 520 ELDETTAKSIVGECKEAQLKKLKDSKNACKGAILAKYVTKIPSAFDELIEKVKG 573 >UniRef50_Q0SWM6 Putative uncharacterized protein n=1 Tax=Clostridium perfringens SM101 RepID=Q0SWM6_CLOPS Length = 666 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 71/545 (13%), Positives = 161/545 (29%), Gaps = 71/545 (13%) Query: 1 MILERVEIVGFRGINRL-SLML-EQNNVLIGENAWGKSSLLDALTLLL------SPESDL 52 M L ++ I ++ ++ + LIG+N GKS+++DA+ + + + Sbjct: 1 MKLSKLRIKNYKSFKDSGTIEIKGNIFALIGQNNAGKSAIMDAIQVFFPNCKKSANSENF 60 Query: 53 YHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFY 112 + F ++D +L L F++ + ++ V + + I Sbjct: 61 HKFTKEDISIELWFSKVNSDYLENKL-FQDKIKKQNEVIKKCIETEKYDKELKKLDEIRE 119 Query: 113 RLEGESAEDGSVMTLR-------------SFLDKDGHPIDVEDINDQARHLVRLMPVLRL 159 + + + ++ K+ I D+ L +++P +R Sbjct: 120 KELNKCILKYGIENEELYVKKIIPKESKAFYILKNNDKISEADLKKILPEL-KIIPAIRD 178 Query: 160 RDARFMRRIRNGTVPNVP--NVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLE 217 + + + E + + + + + + + Sbjct: 179 PKNESTAGTNSYLKDLIQMLDEEAQTEIMMEDKKLTYKELNEVLSEETSKRSKELSSKIT 238 Query: 218 HYFS------EQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFA 271 +Y+S + + + + I I G +++L L Sbjct: 239 NYYSKAIGSSDFEVKVNSSVNISKGTNYSTELIDNTTNIKADILDCGTGYQSMVILALLE 298 Query: 272 TLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLP--LQRIATTNSGELLS 329 T ++ T + +L+IE+PE LHP + L + Q I TT+S +S Sbjct: 299 TYVEIAHT-----NNNYILIIEEPEVYLHPRLQRKMIDTLLRVSEHNQVIFTTHSPITIS 353 Query: 330 LTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETE 389 V + RE + E + L ++ + VEG+ + Sbjct: 354 KLNSLDVKLVEREYGEAKIKNSSVKEIIDE--------LGVRADDFLHSKGIIFVEGKDD 405 Query: 390 TWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVK-----FARRMGIEWHVLVDGDEAGK 444 VI EL ++ + I +I+ + I +L D D Sbjct: 406 EIVIRELLKKLDKCIIDK-INIIQAVGCSNFKWYANAEILINKNFDIPTLILRDSDVERP 464 Query: 445 KYAAT-------------------VRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDV 485 + + + + + L +E++ Sbjct: 465 EKLKKDLVEDIINSFINTPQYARYNQDEKEEIKTKINDAIKVLSQHSLEYYFINPNLLVQ 524 Query: 486 FHRMA 490 F+ Sbjct: 525 FYECK 529 >UniRef50_UPI0001C37B2B hypothetical protein RflaF_15454 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37B2B Length = 559 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 73/578 (12%), Positives = 185/578 (32%), Gaps = 63/578 (10%) Query: 3 LERVEIVGFRGINR---LSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDD 59 ++ ++ + L+ NV IG N GKSS +D + +D+ + + Sbjct: 5 IKTIKFTNHKSFQNDFHSISDLKNVNVFIGRNNCGKSSCID----IFQALTDVKKYTEIN 60 Query: 60 FWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESA 119 G + F + +H +++Y + + + Y + Sbjct: 61 ASIRIGKELSYSDLERV---FSLPIYKQHNIKKYEEILQAYDNKYIEFDVSKYN-DNALD 116 Query: 120 EDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNV 179 + + + F D + + D+ D L+ +RL R + + ++ Sbjct: 117 FNTVITSENGFADNNWDSV-GRDLRDMFSGLI----CIRLNAERDITPEQEVKGVSLSEN 171 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 A L + + L + + L+ ++ L + +++ + Sbjct: 172 GTGAANLIHHILHFDKYEERLVRIDLLEALNKIMYL---------DSKFDGITVQKVSDE 222 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLL-----QAKGTLRLDKDARPLLLIED 294 + + Y + + + G +IL+ L ++ K + + + E+ Sbjct: 223 KWEIFLYENDNRYPLSKMGSGLKTIILVLLNLLVVPYISGNIKISREDVDYEKYIFAFEE 282 Query: 295 PETRLHPIMLSVAWHLL----NLLPLQRIATTNSGELLSLT---PVEHVCRLVRESSRVA 347 E LHP + + + + TT+S +++ + +V+E+ + + Sbjct: 283 LENNLHPALQRRLFDYIYEFSKEHNTMVLLTTHSHVAINMFADKEETQLYHVVKENRKSS 342 Query: 348 AWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAE 407 +G +E + L + + VEG ++ I G E Sbjct: 343 IVNVGDYITKSEILND----LDVRASDLLQSNGIIWVEGPSDKIYIKHWLEIWGDQELVE 398 Query: 408 GI--KVIEFAQSGLKPL-----------VKFARRMGIEWHVLVDGDEAGKKYAAT-VRSL 453 G+ + + + L +K +++D D+ + T ++ Sbjct: 399 GVDYQFLYYGGRILSHFTAEHDSNDDNLIKILST-NRNAAIVIDSDKRNENAEITETKTR 457 Query: 454 LNNDREAEREHLTALPALDMEHFMYRQGFSDVF--HRMAQIPENVPMNLRKIISK-AIHR 510 + + E+ + ++E+++ + + ++ E + I K I+ Sbjct: 458 IKKEFESTEKFCWITKGKEIENYVPIDAINKAYADKKIEDQCEQYQLFPDYIKKKLNINT 517 Query: 511 SSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLAR 548 K A +V + + RV+ L + Sbjct: 518 FDKVAFAHKVVKHINDENSKD----ILDLKERVVELCK 551 >UniRef50_A6C2C4 Putative uncharacterized protein n=2 Tax=Planctomycetales RepID=A6C2C4_9PLAN Length = 661 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 83/596 (13%), Positives = 180/596 (30%), Gaps = 94/596 (15%) Query: 1 MILERVEIVGFRGINRLSL-MLEQ-NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD 58 M L +I FR I + ++ L+G+N GK+++L AL + +S F Sbjct: 1 MQLISAQITNFRSITDSGIFSIDPKVTCLVGKNESGKTAILQALEKINPLDSSHREFRSL 60 Query: 59 DF----WFPPGDINGREHHLHIILTFRESLPG-----------------RHRVRRYRPLE 97 DF E +H + TF + ++ R Sbjct: 61 DFPRARLTEFRTRQDEEEDVHSVTTFWKLDDSDVKAVEEIVGEGVLKSREIKISRGYYNS 120 Query: 98 ACWTPCTDGYHRIF---------------YRLEGESAEDGSVMTLRSFLDKDGHPIDVED 142 W D RL G + + +S ++G Sbjct: 121 TYWIFNQDEKKGFENLLDESSLHAEEKDSIRLTGSIKKAKEYILSKSKTAEEGGGEIRSK 180 Query: 143 INDQARH------------LVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQ----- 185 ++ ++ VL R + + T+P ++E ++ Sbjct: 181 REEELLETINDYYGTKASSWQAIVDVLHERLPKMVYFGNYMTMPGQISIEDLNKRPGAKE 240 Query: 186 ------LDFLARELSSHPQNLSD--------GQIRQGLSAMVQLLEHYFSEQGAGQARYR 231 L ++ P++L + ++ S++ + + +Y+++ + ++R Sbjct: 241 EEPNKVFLALLSLINKTPEDLVEIGEFEMMQAELEAASSSLTREIFNYWTQNRNLRVQFR 300 Query: 232 LMRRRASNEQRSWRYLDIINRMIDRPGGRSY----RVILLGLFATLLQAKGTLRLDKDAR 287 + ++ + R+ + G + R F + L +R + Sbjct: 301 FEQGMPNDPAPFNSGYVMRTRIENLRYGVTTSFDDRSTGFVWFFSFLVWFSQVRKNYGKN 360 Query: 288 PLLLIEDPETRLHPIMLSVAWHLLNL--LPLQRIATTNSGELLSLTPVEHVCRLVR---- 341 ++L+++P LH + + Q TT+S ++ +E V + Sbjct: 361 LIILLDEPGLSLHAKAQADLLRYIEERLKEFQVTFTTHSPFMIDSEHLERVRTVEDIFVE 420 Query: 342 --------ESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLF-ARCWLLVEGETETWV 392 ES + + + ++ +LF LLVEG +E Sbjct: 421 SDDPFEEQESDLGTVVGDKVLSTDKDTLFPLQAALGYDITQTLFIGEHTLLVEGPSEILY 480 Query: 393 INELARQC---GHHFDAEGIKVIEFAQSGLKP-LVKFARRMGIEWHVLVDGDEAGKK--Y 446 + +R+ G + + P + + LVD + GKK Sbjct: 481 LPWFSRKLKAEGRTYLDPRWTLTPCGGIDKVPSFLSLFAGQKLHIATLVDFADGGKKRVR 540 Query: 447 AATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRK 502 LL + + D E + R + + + + + + +K Sbjct: 541 DLRSSELLTSGHVLSADIFAGQDEADTEDLLGRDAYIGLINDCYGLKGDERIPAKK 596 >UniRef50_A6WMH3 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=A6WMH3_SHEB8 Length = 569 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 85/595 (14%), Positives = 192/595 (32%), Gaps = 83/595 (13%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPE----------- 49 M + VEI +R + L +++IGEN GK++L DAL L L+ Sbjct: 1 MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSV 60 Query: 50 SDLYHFERDDFWF--------PPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWT 101 SD+ DF+ + + + T ++ + ++ Sbjct: 61 SDINREAIKDFYQAIINGKGDDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWI-----IG 115 Query: 102 PCTDGYHRIFYRLEGESAE-------------DGSVMTLRSFLDKDGHPIDVEDINDQAR 148 D ++I Y + A+ + T L + + DV N+ + Sbjct: 116 EEADESYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPIELYDYDVTQSNNGLK 175 Query: 149 ------HLVRLMPVLRLRD--ARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL 200 L+ + + RD A + N + + + + +S + Sbjct: 176 VSYSDLRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEI 235 Query: 201 SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGR 260 + + + E++F E + S L + + G Sbjct: 236 ESTETFKKIVTPDPDFENFFDEIVDKLECIPNL--PNLKSILSNITLKSGESYLYQRGLG 293 Query: 261 SYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNL------L 314 ++ + L + +K+A L IE+PE L L A + Sbjct: 294 YRNLVFIYLLFEFF------KGNKNALNLCCIEEPEAHLSVNNLRFATDFIYKSTQKGGS 347 Query: 315 PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPS 374 LQ + +++S ++++ + +V L + + + + + F+ Sbjct: 348 SLQTLISSHSPQVINKLELTNVIVLSGNEA------IHLTDSKKHLTNYLRKRPNFDILK 401 Query: 375 SLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMG---- 430 L + +LVEG TE +IN + + + + ++VI Q+G + ++ Sbjct: 402 LLLSNKTVLVEGTTEEMLINAILYRNNKNLSS--LEVISIEQTGFITFMDVWLQVNKGKP 459 Query: 431 -IEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRM 489 + ++ D D+ + D E + + +E + + HR+ Sbjct: 460 KKKLSIIRDYDDNNATKDKHQKY----DIENDNIRVRTTTQYTLEDDLAGTAGN--LHRL 513 Query: 490 AQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRR---GVDSVPTLLKKMFS 541 + ++ ++SK + +++A +P +++ Sbjct: 514 NTLFNKKCKTPEEM--AKFLKNSKAERMLKIADSILDEMNKDPIMLPKHIQEALD 566 >UniRef50_UPI000197320E hypothetical protein ClM62_07685 n=1 Tax=Clostridium sp. M62/1 RepID=UPI000197320E Length = 668 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 75/477 (15%), Positives = 140/477 (29%), Gaps = 38/477 (7%) Query: 1 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF 60 M L + I ++ I+ L L+GEN GKS++L A+ L D Sbjct: 1 MSLVEISIKNYKSISSCVFRLNGVTALLGENGTGKSNILSAVRYFYDN---LISRSESDE 57 Query: 61 WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE 120 F + + + R + Y + ++ G SAE Sbjct: 58 IFDHNNRLNNRVEIALTY---------DLGRLKQYARVNLRNEETRYASYYEKILGISAE 108 Query: 121 DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE 180 D + + D D L L V R + V ++ Sbjct: 109 DMMTVRMIKIRDMPVRWSHDADTRKLIAGLFPLYFVDA-RQIDLVNW--EVLWKLVGDLV 165 Query: 181 VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE 240 ++ R+ + GQ++ L + LE + + + Sbjct: 166 KPENTVEKELRQELVNAIGEVSGQMKSRLDQIQGGLERKNIKIEPYSRKEFAVALSKLYL 225 Query: 241 QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH 300 D + G ++ L L A+ ++ PL+++++PE LH Sbjct: 226 SGERYQFDESSLAEFSNGTNAFNFTNLLFHILRLMAETKMKE-----PLVILDEPEISLH 280 Query: 301 PIMLSVAWHLLNLL--PLQRIATTNSGELLSLT-----PVEHVCRLVRESSRVAAWRLGP 353 M+ + + ++ + T+S L+ + ++ R R Sbjct: 281 SHMIDELAEIFSQCRYDVRVLLATHSARLIRNILVQEGGENQLYQVYRRGEETKISRF-- 338 Query: 354 SGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVIN-ELARQCGHHFDAEGIKVI 412 + R + I S+ FAR LVEGETE V ++ + Sbjct: 339 QMFRQDSEMRERYFITDQHASAYFARALFLVEGETELEVFQSRFLKELYPLLGQAEL--- 395 Query: 413 EFAQSGLKPLVKFA----RRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 + + R I +L+D D+ + + R E Sbjct: 396 -IKGMSDDVVYRIVSPKKRGYRIPVTILMDLDKVYTYPEKLKKKYFHMCRTGENYFF 451 >UniRef50_A6GL94 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GL94_9BURK Length = 652 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 85/580 (14%), Positives = 176/580 (30%), Gaps = 91/580 (15%) Query: 3 LERVEIVGFRGINRLS-LML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD-- 58 L + ++ ++ I + + L + VL+G+N GK++ L+AL L + Y + D Sbjct: 4 LVKAQVWKYKSIEDSTPVALADDVTVLVGKNESGKTAFLEALYKALPLGAAGYDYVADYP 63 Query: 59 --DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEG 116 D + + + LTFR + + + G I Sbjct: 64 RKDLVRYRPQHEAKNYQKVVQLTFR--IEKELADTINKEVFGGAQIVAAGSTFIRDTTIA 121 Query: 117 ESAEDGSVMTLRSFLDKDGHPID-VEDINDQARHLVRLMPVLRL----------RDARFM 165 + G + ++ L P+ +E ++ L VL R A+F Sbjct: 122 NTNTIGFHIDQKAALVAQQKPLSDLEHQDEVFAGATSLADVLAKIEGLNLPTDNRLAKFA 181 Query: 166 RRIRNGTVP----NVPNVEVTARQLD-FLARELSSHPQNLSDGQI--------------- 205 + R + + + + L L + L L +G+I Sbjct: 182 AQWRARAIKANGWGLVDGHIWQTYLLPALPKFLYFDDYKLLEGKINLPALQQREAAKQLT 241 Query: 206 -----------------------------RQGLSAMVQLL----------EHYFSEQGAG 226 + L A+ + + Sbjct: 242 DADETAQGLLQLAGTTLQELMSDEGYETAKAKLEAIGLNITQKVFEFWKQNQDLDVEFDL 301 Query: 227 QARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDA 286 + + + S R + + + RS I F A + +DA Sbjct: 302 KTDSKDVAPYNSGVNLYIRIKNRRHGVTVPFDQRSKGFIWFFSFLVWFDAVQSRAATQDA 361 Query: 287 RPLLLIEDPETRLHPIMLSVAWHLLNLLPLQ--RIATTNSGELLSLTPVEHVCRLVRESS 344 +LL+++P LH + + + L Q I TT+S ++ ++ V + Sbjct: 362 L-VLLLDEPGLNLHALAQADFLAYIRELSTQHQIIYTTHSPFMVDSACLDEVRVVEDRVK 420 Query: 345 RVAAWRLGPSGLSTEDSRRISFHIRFNRP-SSLFARCWLLVEGETETWVINELARQCGHH 403 +G S E + + ++ + A+ +L+EG + ++ + Sbjct: 421 EGTKITGDLAGSSDESVFPLQAALGYSIAQNLFIAKKNVLIEGPADLILLQHMGALLEAS 480 Query: 404 FDAEGIK---VIEFAQSG-LKPLVKFARRMGIEWHVLVDG-DEAGKKYAATVRSLLNNDR 458 D +G+ ++ L V ++ VL D +K VR L + Sbjct: 481 -DKQGVGDAILVPVGGLDKLATFVALLGSNKLKLVVLHDRAASPNQKLEDLVRQKLIERK 539 Query: 459 EAEREHLTALP---ALDMEHFMYRQGFSDVFHRMAQIPEN 495 + P D+E + + + F++ N Sbjct: 540 RVLDFSMFIDPAPAEADIEDLLPTDAYIEAFNQAYGKELN 579 >UniRef50_Q47H18 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47H18_DECAR Length = 591 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 70/561 (12%), Positives = 154/561 (27%), Gaps = 76/561 (13%) Query: 2 ILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFW 61 + V ++ + + L+ NVL+G N GKS+++ A +L + Sbjct: 5 RITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERID 64 Query: 62 FPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAED 121 P G ++ + +I +RL + Sbjct: 65 VPTFSGLGYRINI--------------NELPIASENIFFDYDDSTPAQIKFRLSNGNHLR 110 Query: 122 GSVMTLRSFLDKDGHPIDVEDINDQARHLVRLM--PVLRLRDARFMRRIRNGTVPNVPNV 179 RS + + Q + V L + + + Sbjct: 111 LLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYAKEAARLALL 170 Query: 180 EVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASN 239 A R + + +G G Sbjct: 171 TSGAS------RNFRNIWYHYPEG---------FDSFRQLIKTTWPGMDIEPPELSPNHR 215 Query: 240 EQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRL 299 + + D R I G + T + LL+I++P+ L Sbjct: 216 DLAMFCPEDRHPREICWAGYGFQVWCQM----------LTHVVKASKASLLVIDEPDIYL 265 Query: 300 HPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 H + LL L + T+S E++ ++ + +++ R+ Sbjct: 266 HSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQ--RVKDISQLKL 323 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHH--FDAEGIKVIEFAQS 417 + ++ + + VEG + +I+ AR G+ + V++ Sbjct: 324 VFSALGSNLNPILTQLSKTKRVVFVEGL-DFQIISVFARVLGYQRVANRSDFAVVKIEGF 382 Query: 418 GLKPLVKFARRM------GIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAL 471 K V + I V++D D + V L Sbjct: 383 NPKRAVDLTSGIEATVGSNIARAVILDRDYRPESEIIDVTKELQKH----GFMAHIHKRK 438 Query: 472 DMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDS 531 ++E+++ + R I S+ I R+ + A + + + D+ Sbjct: 439 EIENYLL----------------DKNALERAIDSRLIERARRSGTAKQELPDVEKIIEDA 482 Query: 532 VP----TLLKKMFSRVLWLAR 548 + ++ ++ +R + +R Sbjct: 483 MKTCKHSVFGQIQARAVEFSR 503 >UniRef50_C5DA37 ATP-dependent OLD family endonuclease n=1 Tax=Geobacillus sp. WCH70 RepID=C5DA37_GEOSW Length = 634 Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 80/605 (13%), Positives = 187/605 (30%), Gaps = 86/605 (14%) Query: 1 MILERVEIVGFRGINRLSLML-EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERD- 58 M L + + FRG + E NV+IG+N GKS+L++AL + + E+ + + Sbjct: 1 MKLHSLYLKNFRGYREEVINFSENMNVIIGKNDIGKSTLMEALEIFFNGENKDALVKPEI 60 Query: 59 ------------------DFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRP----- 95 F I + + + + G +R+ Sbjct: 61 EDCNVNSTEKVMEIGACFTFEEEEITIIDSSNPTSLKEEYLLNKDGLLEIRKVWDCSKDK 120 Query: 96 -----------------LEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDG--H 136 ++ R R + +D ++ + + Sbjct: 121 ITASSLKVYLVAHYPKGIDKPLITLKQEELRKELRTIADKIDDYDLINKNKNAEMRKALY 180 Query: 137 PIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSH 196 V + + + + + + + + N + + + T D + Sbjct: 181 KHLVNEDTEFETRFIEIQKIDKDSKNIWDKIKSNLPLYFLFQSDRTNSDNDSEVQNPLKI 240 Query: 197 PQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYR-------------LMRRRASNEQRS 243 + ++ LS +V+ ++ S + ++ + S Sbjct: 241 ATKKALAEMEDQLSHIVEEVDKKVSAIAEDTINKLKDFNGEIANRLKTNLNLKSWDSLFS 300 Query: 244 WRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIM 303 ++ +++ G R+ILL F +A+ + + IE+PET HP Sbjct: 301 FQLESDDGIPLNKRGSGIRRLILLSYFRA--EAERIAEEKNNKNIIYAIEEPETSQHPNF 358 Query: 304 LSVAWHLLNLL----PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTE 359 + L + Q I TT++ E+ + ++ + + ++ R L Sbjct: 359 QRMIIDSLLKISSDDKHQVIITTHTPEIAKMVDLDSLIFISKDEYGPQIVRKEEEKLKG- 417 Query: 360 DSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCG-----HHFDAEGIKVIEF 414 I + + ++ + VEGE + + + + + I +I Sbjct: 418 ----IVRSLGILPT--IESKVVICVEGENDINFLRNINQAIDDFKDIIDLEKSNITMIGM 471 Query: 415 AQSGLKPLV--KFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALD 472 S L V + R + L D D + Y T+ + N R + Sbjct: 472 KGSNLVNWVNRNYLRNSNVIEFHLYDNDR--EDYRKTIEEIKAN--RDGRRFGELTSKRE 527 Query: 473 MEHFMYRQGFSDVF---HRMAQIPENVPMNLRKIISKAIHRSSK--PDLAIEVAMEAGRR 527 ME+++ + + F + ++ + + ++SK + + K + + Sbjct: 528 MENYIPPELIEEEFGINLDLEKMDWDNIDVPKVLVSKGVMQHIKCPKKREEAIKERLNGQ 587 Query: 528 GVDSV 532 + Sbjct: 588 LSKKI 592 >UniRef50_UPI0001C3721E hypothetical protein RflaF_16820 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3721E Length = 566 Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 72/572 (12%), Positives = 181/572 (31%), Gaps = 50/572 (8%) Query: 1 MILERVEIVGFRGIN-RLSLMLEQNNVLIGENAWGKSSLLDALTL------LLSPESDLY 53 M+L I +R I + L LIG+N GK++++ A++L + S S Sbjct: 1 MLLSYFTISNYRSIQGEYKIDLSNYTTLIGKNNEGKTNVIKAISLGMEIIRITSSGSKRK 60 Query: 54 HFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYR-PLEACWTPCTDGYHRIFY 112 + + ++++ + + R + +G ++ Sbjct: 61 ILNTSLYSWSEDFPISQQNNKRLKKKVTKLRMDFMLDAREQTKYYEQTDSHINGSLSVYI 120 Query: 113 RLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGT 172 ++ + + + KD V++I + + +R A + + Sbjct: 121 EIDEGNQFSIRIPK-QGKNTKDLSKTKVKEIASCIVDCFDVQYIPAIRSAEDAYDVISQL 179 Query: 173 VPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRL 232 + + N L + + L++ + + L + R Sbjct: 180 IDSELNSIQDPEYQQALDIIENKQRERLNNLE-NNITKPLKMFLPSIRHVRLNLLQNNRT 238 Query: 233 MRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLI 292 R + D ++ + R G + ++ L + + + L+L+ Sbjct: 239 SSYRFAKRFIDVEIDDGVSTSLSRKGDGVKSLSVIALLSQI---------TSEKNILILV 289 Query: 293 EDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR 350 ++PET LHP + +L+ L Q I +T+S ++ T + + Sbjct: 290 DEPETHLHPEAIRYIHAVLHQLSNKNQVIISTHSPIFINRTSISSNIIVD---------- 339 Query: 351 LGPSGLSTEDSRRISFHIRFNRPS-SLFARCWLLVEGETETWVINELA---RQCGHHFDA 406 + + I + +++ ++VEG + ++ + + Sbjct: 340 -NGTASPADRLETIRKTLGVICSDNLMYSDYVVVVEGPCDKKILEAYFMLDSKLKEWIEN 398 Query: 407 EGIKVIEFAQS-GLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHL 465 + V + L+ V + +++D D+AGK+ V+ Sbjct: 399 GFLTVRSIGGTRNLRNEVYSLTNYCCNFLMVLDYDQAGKEAFEAVKQDEKFFITDSNAVF 458 Query: 466 TALPAL---DMEHFMYRQGFSDVF-HRMAQIPENVPMNLRKI---------ISKAIHRSS 512 + ++E + + D + I EN N+ K + + Sbjct: 459 FKVHGKSPSELEDLFKPEVYQDYLSSKHIDITENGFKNISKKWADRIGSIYVGGDLSDEE 518 Query: 513 KPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVL 544 + ++ +++ +S+ K+ +V Sbjct: 519 ENEIKTQISEIVSEHIAESLTEEGIKVLDKVK 550 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.116 0.276 Lambda K H 0.267 0.0356 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,218,045,056 Number of Sequences: 3077464 Number of extensions: 80338036 Number of successful extensions: 460381 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2602 Number of HSP's successfully gapped in prelim test: 6143 Number of HSP's that attempted gapping in prelim test: 445004 Number of HSP's gapped (non-prelim): 13402 length of query: 552 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 418 effective length of database: 628,016,180 effective search space: 262510763240 effective search space used: 262510763240 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 95 (41.4 bits)