54 c3nhaA_ Probab=98.98   E-value=3.4e-08  Score=70.20  Aligned_columns=194  Identities=22%

Q ss_pred             EEEEEEEECC--EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHH
Q ss_conf             1567997088--38998269888666999999984475455434511131445455566423999999815544421023
Q batch____        14 INRLSLMLEQ--NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVR   91 (552)
Q Consensus        14 i~~~~i~l~~--~tvlvG~NgsGKStiL~Al~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~   91 (552)
                      ++++++.+.+  ++.|+|+|||||||++.+|.-+..+..+...+...+............    +.+...+.........
T Consensus        56 L~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~~~----i~~i~q~~~~~~~tv~  131 (278)
T c3nhaA_          56 LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSH----IGVVPQDTVLFNDTIA  131 (278)
T ss_dssp             EEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHT----EEEECSSCCCCSEEHH
T ss_pred             EECCEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC----CEEEEEECCCCCHHHH
T ss_conf             653534661795899985766675326899985065111222221012443210123442----1156420344300188


Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             32001111024677712799996123335565310233114456433322104677876642002432001233101101
Q batch____        92 RYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNG  171 (552)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (552)
                      ..-.+..                                                                         
T Consensus       132 eni~~~~-------------------------------------------------------------------------  138 (278)
T c3nhaA_         132 DNIRYGR-------------------------------------------------------------------------  138 (278)
T ss_dssp             HHHHTTS-------------------------------------------------------------------------
T ss_pred             HHHHHHC-------------------------------------------------------------------------
T ss_conf             8754112-------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf             45555322444678888887666545421013468999999999999986642223223332101223301232037755
Q batch____       172 TVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIIN  251 (552)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (552)
                                                                         ..........................+..
T Consensus       139 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  167 (278)
T c3nhaA_         139 ---------------------------------------------------VTAGNDEVEAAAQAAGIHDAIMAFPEGYR  167 (278)
T ss_dssp             ---------------------------------------------------TTCCHHHHHHHHHHHTCHHHHHTSTTGGG
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             ---------------------------------------------------11102358999997413445541755554


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCCHHH
Q ss_conf             42223674--3057899999999999755641135657548830531257889999999999856--9829994189899
Q batch____       252 RMIDRPGG--RSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLL--PLQRIATTNSGEL  327 (552)
Q Consensus       252 ~~~~~~~~--g~~~~~~l~~~~~~~~~~~~~~~~~~~~~illIDEPE~hLHP~~q~~l~~~l~~~--~~QviiTTHSp~l  327 (552)
                      ..+...+.  ..+....+.++.+++          ..+.++++|||-++|.|...+.+.+.+++.  +.-+|++||.+..
T Consensus       168 ~~~~~~g~~lS~G~~qrl~laral~----------~~~~ililDEpts~lD~~~~~~i~~~i~~~~~~~tvi~itH~~~~  237 (278)
T c3nhaA_         168 TQVGERGLKLSGGEKQRVAIARTIL----------KAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLST  237 (278)
T ss_dssp             CEESTTSBCCCHHHHHHHHHHHHHH----------HCCSEEEEECCSSCCCHHHHHHHHHHHHHHHTTSEEEEECCSHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCC----------CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf             3202466643321000001221012----------211003320732357889999999998543289879998099899


Q ss_pred             HHCCCHHHEEEEEECCCCEEEE
Q ss_conf             7407910279999738967999
Q batch____       328 LSLTPVEHVCRLVRESSRVAAW  349 (552)
Q Consensus       328 i~~~~~~~i~~l~~~~~~~~~~  349 (552)
                      +..  .+.|..+.  +|+....
T Consensus       238 i~~--~DrV~vl~--~G~iv~~  255 (278)
T c3nhaA_         238 VVN--ADQILVIK--DGCIVER  255 (278)
T ss_dssp             HHT--CSEEEEEE--TTEEEEE
T ss_pred             HHH--CCEEEEEE--CCEEEEE
T ss_conf             985--99799997--8889996