BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (66 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID... 135 3e-31 UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio ... 54 2e-06 UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptosp... 51 1e-05 UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteur... 47 2e-04 UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkhol... 46 3e-04 UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella... 44 0.001 UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax... 44 0.001 UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptosp... 43 0.003 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 42 0.006 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 41 0.014 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 40 0.030 >UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID=YMFT_ECOLI Length = 66 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/66 (100%), Positives = 66/66 (100%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP Sbjct: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 Query: 61 DIYPKD 66 DIYPKD Sbjct: 61 DIYPKD 66 >UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0N7_9VIBR Length = 64 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 35/62 (56%) Query: 2 KAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD 61 K YW L ++ E+A K+ ++ YLRLV G+K LAK L T G + K LRPD Sbjct: 3 KKYWRQLPDVKKAEMAVKLKTSTEYLRLVITGHKVPGAALAKNLHDLTHGEVDKHKLRPD 62 Query: 62 IY 63 I+ Sbjct: 63 IF 64 >UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AS87_9BACT Length = 72 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y LT+ Q+ +LAG+VG++ YL + + +A ++E T G +T+ +LRP Sbjct: 3 LNEYMRELTRSQKEDLAGRVGTSLNYLFQLSGEFSVPGPKIALRIEHATGGQVTRHELRP 62 Query: 61 DIYPKD 66 DIYP++ Sbjct: 63 DIYPEE 68 >UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=A7JSL2_PASHA Length = 66 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 33/51 (64%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 + + A K+G + YLR V GY LAKK+E+ T+G + KS+LRPD++ Sbjct: 15 KADFAKKLGISKSYLRQVETGYSPMPAYLAKKIEEVTNGEVAKSELRPDLW 65 >UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMH8_BURVG Length = 94 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K+++ + + + A + G+T +LR V G +KA L +E+ + G +T+ DLRP Sbjct: 17 LKSFFAGIPRSDRDHFAARCGTTAAFLRNVIYGQRKAGEKLCVAIERESGGVVTRRDLRP 76 Query: 61 D----IYPK 65 D I+P+ Sbjct: 77 DDWHLIWPE 85 >UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M12 RepID=B0U2N7_XYLFM Length = 81 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y +L +Q A K +T GYLR ++ LA++L++ + G +++ DLRP Sbjct: 4 LRTYLATLIPAEQAHYARKANTTIGYLRKALCKGQRFDGALARRLDEASGGRVSRYDLRP 63 Query: 61 DIY 63 D++ Sbjct: 64 DVF 66 >UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873AE2 Length = 89 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Query: 10 KEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 K E+ + G+T GYLR + G K+AS +A LE+ T G +T+ LRP+ I+P+ Sbjct: 25 KNTPDEVISRTGTTRGYLRQIAYGNKQASATVASVLERETEGLLTRKSLRPNDWHVIWPE 84 >UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum RepID=A3ETJ5_9BACT Length = 70 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 31/51 (60%) Query: 16 LAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD 66 +A + +T YL + G+ K + + ++E T G +T+ +LRPDIYP++ Sbjct: 18 MAEEAKTTVAYLYKLAGGHGKPGWRICSRIEHATEGQVTRHELRPDIYPEE 68 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +KAY+ + Q + A K+G P +L + +G KA +A +E+ T + KS++ P Sbjct: 3 LKAYFSDKPRGFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKKSEILP 62 Query: 61 DIY 63 D+Y Sbjct: 63 DVY 65 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 31/51 (60%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 Q LA K+G TPG + G + A ++E T+GA+T+++LRPDI+ Sbjct: 12 QTLLARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDIF 62 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y ++ KE A G++ G L+ V G ++AS LA L++ T G I ++RP Sbjct: 3 LSEYLKTMDKEGLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRP 62 Query: 61 DI 62 DI Sbjct: 63 DI 64 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID... 95 6e-19 UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkhol... 94 9e-19 UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptosp... 93 2e-18 UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio ... 87 1e-16 UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella... 82 5e-15 UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteur... 78 9e-14 UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax... 73 2e-12 Sequences not found previously or not previously below threshold: UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia ... 72 4e-12 UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID... 71 1e-11 UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptosp... 69 6e-11 UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS ... 62 6e-09 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 62 6e-09 UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteob... 62 7e-09 UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemoph... 62 8e-09 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 60 2e-08 UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax... 59 5e-08 UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Esch... 58 8e-08 UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acineto... 57 2e-07 UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acineto... 57 2e-07 UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteob... 57 2e-07 UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acineto... 56 4e-07 UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkhol... 55 8e-07 UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=... 54 1e-06 UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella... 50 2e-05 UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkhol... 50 3e-05 UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa Re... 49 5e-05 UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX 48 9e-05 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 48 9e-05 UniRef50_Q1YW30 Putative uncharacterized protein n=1 Tax=Photoba... 48 1e-04 UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovo... 47 2e-04 UniRef50_Q6LJU5 Putative uncharacterized protein n=2 Tax=Photoba... 45 7e-04 UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovo... 44 0.001 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 44 0.002 UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobac... 43 0.002 UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptosp... 42 0.005 UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylo... 42 0.006 UniRef50_Q3JDF9 Putative uncharacterized protein n=2 Tax=Gammapr... 42 0.007 UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovo... 41 0.011 UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeri... 41 0.011 UniRef50_Q6MB81 Putative uncharacterized protein n=1 Tax=Candida... 40 0.026 UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopse... 39 0.068 UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsie... 39 0.073 >UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID=YMFT_ECOLI Length = 66 Score = 95.1 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 66/66 (100%), Positives = 66/66 (100%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP Sbjct: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 Query: 61 DIYPKD 66 DIYPKD Sbjct: 61 DIYPKD 66 >UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMH8_BURVG Length = 94 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K+++ + + + A + G+T +LR V G +KA L +E+ + G +T+ DLRP Sbjct: 17 LKSFFAGIPRSDRDHFAARCGTTAAFLRNVIYGQRKAGEKLCVAIERESGGVVTRRDLRP 76 Query: 61 D----IYPK 65 D I+P+ Sbjct: 77 DDWHLIWPE 85 >UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AS87_9BACT Length = 72 Score = 93.2 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y LT+ Q+ +LAG+VG++ YL + + +A ++E T G +T+ +LRP Sbjct: 3 LNEYMRELTRSQKEDLAGRVGTSLNYLFQLSGEFSVPGPKIALRIEHATGGQVTRHELRP 62 Query: 61 DIYPKD 66 DIYP++ Sbjct: 63 DIYPEE 68 >UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0N7_9VIBR Length = 64 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 35/62 (56%) Query: 2 KAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD 61 K YW L ++ E+A K+ ++ YLRLV G+K LAK L T G + K LRPD Sbjct: 3 KKYWRQLPDVKKAEMAVKLKTSTEYLRLVITGHKVPGAALAKNLHDLTHGEVDKHKLRPD 62 Query: 62 IY 63 I+ Sbjct: 63 IF 64 >UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M12 RepID=B0U2N7_XYLFM Length = 81 Score = 82.0 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y +L +Q A K +T GYLR ++ LA++L++ + G +++ DLRP Sbjct: 4 LRTYLATLIPAEQAHYARKANTTIGYLRKALCKGQRFDGALARRLDEASGGRVSRYDLRP 63 Query: 61 DIY 63 D++ Sbjct: 64 DVF 66 >UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=A7JSL2_PASHA Length = 66 Score = 77.8 bits (190), Expect = 9e-14, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + +Y + + + A K+G + YLR V GY LAKK+E+ T+G + KS+LRP Sbjct: 3 LTSYLSDRPRGFKADFAKKLGISKSYLRQVETGYSPMPAYLAKKIEEVTNGEVAKSELRP 62 Query: 61 DIY 63 D++ Sbjct: 63 DLW 65 >UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873AE2 Length = 89 Score = 73.2 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Query: 10 KEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 K E+ + G+T GYLR + G K+AS +A LE+ T G +T+ LRP+ I+P+ Sbjct: 25 KNTPDEVISRTGTTRGYLRQIAYGNKQASATVASVLERETEGLLTRKSLRPNDWHVIWPE 84 >UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EFR1_BURCJ Length = 84 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K+ +T+E+Q + G+T GY+R + L +E+ + G +T+ DL P Sbjct: 6 LKSLLRQMTREEQAQFCFACGTTLGYMRKALSVGAIFGPALCVSIERESKGLVTRRDLHP 65 Query: 61 ----DIYPK 65 DI+P+ Sbjct: 66 NDWQDIWPE 74 >UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID=B7UQF7_ECO27 Length = 93 Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ + +SL+ ++Q A + G++ GYLR + + L +E+ ++G +T+ LRP Sbjct: 4 LRIFLNSLSSDEQRMFACECGTSIGYLRKALSKGQVLGASLCVLIERASNGEVTRQQLRP 63 Query: 61 ----DIYPK 65 +I+P+ Sbjct: 64 FDWMNIWPE 72 >UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum RepID=A3ETJ5_9BACT Length = 70 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 38/66 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + + ++ ++ ++A + +T YL + G+ K + + ++E T G +T+ +LRP Sbjct: 3 LLEWLRQNSQPERLKMAEEAKTTVAYLYKLAGGHGKPGWRICSRIEHATEGQVTRHELRP 62 Query: 61 DIYPKD 66 DIYP++ Sbjct: 63 DIYPEE 68 >UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7N1J7_PHOLL Length = 94 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y +L + + LA K+G + YL + +GY +E T+G +T+ DLRP Sbjct: 22 LNDYISNLKRGEAKLLAEKLGVSSSYLSQMAHGYAPVPPARCFDIENATNGKVTRQDLRP 81 Query: 61 ----DIYPK 65 I+P+ Sbjct: 82 HDWQKIWPE 90 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y ++ KE A G++ G L+ V G ++AS LA L++ T G I ++RP Sbjct: 3 LSEYLKTMDKEGLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRP 62 Query: 61 DI 62 DI Sbjct: 63 DI 64 >UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0AG04_NITEC Length = 83 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y L+ + + A ++ +LR + GY++A +L +E+ + G + LRP Sbjct: 3 LIEYIKKLSISDRNDFAVCCETSFAHLRNIAYGYRRAGELLCINIERESGGLVKCETLRP 62 Query: 61 DI 62 D+ Sbjct: 63 DV 64 >UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QXI3_HAEPR Length = 74 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K + +SL+ ++Q + A + G+T GYLR + + +E+ + G +T+ L P Sbjct: 4 LKHFLNSLSLKEQRDFAERCGTTLGYLRKSISKKSILGAEICVAIERESKGEVTRKHLVP 63 Query: 61 DI---YPK 65 +P+ Sbjct: 64 HWEFRWPE 71 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +KAY+ + Q + A K+G P +L + +G KA +A +E+ T + KS++ P Sbjct: 3 LKAYFSDKPRGFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKKSEILP 62 Query: 61 DIY 63 D+Y Sbjct: 63 DVY 65 >UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME19_VIBVY Length = 84 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFN-GYKKASFVLAKKLEQYTSGAITKSDLR 59 +KAY SLT ++ A + G+T YLR + + LE+ +SG +++ DLR Sbjct: 4 LKAYLSSLTMPEKESYAIRAGTTLRYLRKIVSIKRTTIHPKTCALLERESSGKVSRKDLR 63 Query: 60 PD----IYPK 65 PD I+P+ Sbjct: 64 PDDWFEIWPE 73 >UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Escherichia coli RepID=C8UNK0_ECO1A Length = 100 Score = 58.1 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K + SL + A ++G + YL + +G S A +E T G +++++LRP Sbjct: 3 LKEFIKSLRVGDAKKFAARLGVSSSYLSQMASGRTAISPTRALMIESATEGQVSRAELRP 62 Query: 61 D----IYPK 65 I+P+ Sbjct: 63 HDWELIWPE 71 >UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=C6RL40_ACIRA Length = 82 Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +KA+ +L+ + + + A + ++ GYL + G K S LA K+++ + GA++ L P Sbjct: 9 LKAFLANLSLDDRKDFAKRCQTSLGYLNQIMYGNSKCSASLAIKIDKESDGAVSCDLLCP 68 Query: 61 D 61 + Sbjct: 69 E 69 >UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2HWL5_ACIBC Length = 82 Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 MKAYWDSL-TKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLR 59 + AY L + + A K G+T G L + G S +L+KK+ + G + SDLR Sbjct: 17 LLAYMKKLGSDSEVQAFAEKCGTTKGNLLQIAYGGSV-SPILSKKISNQSGGEVLLSDLR 75 Query: 60 PDIYPK 65 PDI+ + Sbjct: 76 PDIFSE 81 >UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q141U8_BURXL Length = 88 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + A+ +SL+ ++ A +T GYLR + ++ L ++E+Y + + DLRP Sbjct: 4 LLAFINSLSPSEREHFASTCRTTIGYLRKAISAGQELRPDLCVRIERYPGCPVGRIDLRP 63 Query: 61 DIYPKD 66 + ++ Sbjct: 64 RDWFEN 69 >UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii AYE RepID=B0V853_ACIBY Length = 86 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + +Y S +KE A G+T L + G S L+K + + + G I+ SDLRP Sbjct: 24 LLSYIKSKSKEDLEVFAKSCGTTVNNLFQIAYGGSV-SATLSKTINKESEGKISLSDLRP 82 Query: 61 DIY 63 D++ Sbjct: 83 DVF 85 >UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A1VPJ4_POLNA Length = 187 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + AY +SL+ +Q A + G+T GYLR + ++ L +E+ + ++ LRP Sbjct: 4 LLAYLNSLSPAEQKAFALRCGTTVGYLRKAGSTGQRIGAELCINIERESLKSVVCEVLRP 63 Query: 61 DI 62 DI Sbjct: 64 DI 65 >UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=Neisseria gonorrhoeae FA19 RepID=UPI0001AF7BFA Length = 76 Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y + Q +LA K G +P ++ + G K A +E+ T+G +T+ ++ P Sbjct: 3 LRDYCA--IRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFP 60 Query: 61 D----IYPK 65 D I+P+ Sbjct: 61 DTWHLIWPE 69 >UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M23 RepID=B2I5H4_XYLF2 Length = 86 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 31/49 (63%) Query: 15 ELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 +LA + + L ++ G+K+A L K LE+ T+GA+++ LRPDI+ Sbjct: 23 QLATRAVCSHKTLYMIALGHKRAGHQLVKSLERVTNGAVSRYQLRPDIF 71 >UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB3_9BURK Length = 97 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K Y+ S + +LA +G + +L + +G S +EQ T+GA+ + DL+P Sbjct: 3 LKTYFGSSERGTAKKLASSIGVSQSFLSQMASGLSPISQERCFLIEQATAGAVARWDLKP 62 Query: 61 ----DIYPK 65 ++P+ Sbjct: 63 HNWHKLWPE 71 >UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P4Q9_POPTR Length = 77 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Query: 8 LTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP----DIY 63 LT + ELA + G+TP YL V G + A+ LA+++ I SDLRP +I+ Sbjct: 6 LTPQDARELAVRAGTTPAYLYQVLTGRRAANPALARRI-NAADPRILLSDLRPGDWHEIW 64 Query: 64 PK 65 P+ Sbjct: 65 PE 66 >UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX Length = 91 Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y Q + G + ++ V GY++ S A ++ + T+ +T +LRP Sbjct: 3 LRDYLKE-KHITQLQFGKLTGLSQVHVSRVLGGYERFSPEKALRVAEVTNFEVTPHELRP 61 Query: 61 DIYP 64 DIYP Sbjct: 62 DIYP 65 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 30/48 (62%) Query: 16 LAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 LA K+G TPG + G + A ++E T+GA+T+++LRPDI+ Sbjct: 15 LARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDIF 62 >UniRef50_Q1YW30 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YW30_PHOPR Length = 70 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 4 YWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 YW SLT EQ+ +A G + +LR + K+AS LA K+E K LRPDI+ Sbjct: 8 YWRSLTLEQRNIIADLSGCSIWHLRNIGFDGKRASPTLAIKIELACG--YPKEMLRPDIF 65 Query: 64 PK 65 + Sbjct: 66 GE 67 >UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1S9_ACIDE Length = 81 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 Q LA + P + +G + +E+ T+GA+++ DLRPD I+P+ Sbjct: 17 QAGLAKAIDVAPAIVHQWRSGVRPVPVQHCLAIERATNGAVSRRDLRPDDWHLIWPE 73 >UniRef50_Q6LJU5 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q6LJU5_PHOPR Length = 97 Score = 45.1 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 4 YWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 +W + ++ LA +VG+ YLR V + V+A+K+E K LRPDI+ Sbjct: 37 FWREFSVVERKLLAEEVGAAVLYLRNVGKQDVQVGPVMARKIEAACG--YPKELLRPDIF 94 Query: 64 PKD 66 +D Sbjct: 95 GED 97 >UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TN00_ACIAC Length = 80 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 14 GELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 G+LA +G + +E+ TSGA+++ DLRPD I+P+ Sbjct: 15 GKLAEAIGVGQSAVSNWRARGTTPDAAYCVAIERATSGAVSRRDLRPDDWHLIWPE 70 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q E+A ++G +P + NG +K ++E+ TSG + +LRPD+ Sbjct: 20 QSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEELRPDV 69 >UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobacteria RepID=B4EWP1_PROMH Length = 83 Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPK 65 Q LA + S + N + +EQ T G +T+S LRPDIYP+ Sbjct: 21 QSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRSQLRPDIYPE 73 >UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVZ4_9BACT Length = 85 Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%) Query: 38 SFVLAKKLEQYTSGAITKSDLRPDIYPKD 66 S K+EQ T G +T+ +LRPD+YPK+ Sbjct: 41 SAEYVLKVEQATGGRVTRHELRPDLYPKE 69 >UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IT79_METNO Length = 83 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY-PKD 66 Q +LA G + + + + ++ S +A +E+ T+G I + LRPD + P D Sbjct: 17 QPKLARAAGISQQQVSKLLHCQRQISAGVAIAIEKATAGKIGRWQLRPDYWDPPD 71 >UniRef50_Q3JDF9 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q3JDF9_NITOC Length = 107 Score = 42.0 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K + TK ++ ++A + YL + ++ AS +A ++E+ T SD R Sbjct: 13 LKEFLKVATKRERADVAVACSDSVSYLYQIAGEHRYASPWMATQIERQTRVVADLSDGRL 72 Query: 61 DIYPK 65 + P+ Sbjct: 73 EPVPR 77 >UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TVQ0_ACIAC Length = 84 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 23 TPGYLRLVFNGY--KKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 + +R +GY + S + +EQ T G +T+ DLRP I+P+ Sbjct: 31 SDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPHDWAAIWPE 79 >UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QPX1_9RHOB Length = 74 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKS 56 + +Y + +Q + A +VG + G + + NG K LA ++E+ T+G+++ S Sbjct: 4 LSSYLKE-KRIRQADFAEQVGVSQGVISRLANGASKPGLDLAVRIERATAGSVSAS 58 >UniRef50_Q6MB81 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB81_PARUW Length = 87 Score = 40.0 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 +K Y + + E A K+G L+ + G +K LA ++E+ G ++ DL Sbjct: 10 LKEYLEEY-QITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGKVSPRDL 66 >UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MG99_RHOPA Length = 89 Score = 38.5 bits (88), Expect = 0.068, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 5 WDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 + G+LA ++G+T L + G + S L K+ T I +LRPD+ Sbjct: 15 LRQTPPLKLGDLARRIGTTTANLSRIETGKQALSDALLPKIVAETG--IPARELRPDL 70 >UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T869_KLEPR Length = 77 Score = 38.5 bits (88), Expect = 0.073, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K Y + + +Q + A VG T GY+ V +G A K T +T DL P Sbjct: 3 LKNYLKT-SGVRQQDFAQLVGETQGYVSRVASGKCMLGAATALKWAAATGYQVTPHDLLP 61 Query: 61 DIYPK 65 +IY K Sbjct: 62 NIYRK 66 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkhol... 93 3e-18 UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptosp... 91 1e-17 UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID... 90 2e-17 UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS ... 90 2e-17 UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia ... 89 4e-17 UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID... 89 5e-17 UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptosp... 85 5e-16 UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Esch... 83 2e-15 UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteur... 83 3e-15 UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemoph... 83 4e-15 UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkhol... 82 6e-15 UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteob... 81 9e-15 UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteob... 81 1e-14 UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acineto... 80 3e-14 UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella... 78 7e-14 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 77 2e-13 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 77 2e-13 UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio ... 76 2e-13 UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acineto... 76 4e-13 UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax... 75 5e-13 UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkhol... 75 6e-13 UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acineto... 74 1e-12 UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=... 73 3e-12 UniRef50_Q1YW30 Putative uncharacterized protein n=1 Tax=Photoba... 73 4e-12 UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX 72 7e-12 UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovo... 70 2e-11 UniRef50_Q6LJU5 Putative uncharacterized protein n=2 Tax=Photoba... 68 6e-11 UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax... 68 1e-10 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 66 2e-10 UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella... 64 1e-09 UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovo... 63 3e-09 UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa Re... 60 3e-08 Sequences not found previously or not previously below threshold: UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=... 61 1e-08 UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli ... 60 3e-08 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 58 6e-08 UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella... 58 1e-07 UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingell... 57 2e-07 UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator ... 56 3e-07 UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica... 56 5e-07 UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisser... 55 5e-07 UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylo... 55 6e-07 UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobac... 54 1e-06 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 54 2e-06 UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovo... 53 4e-06 UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoa... 53 4e-06 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 52 6e-06 UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeri... 51 1e-05 UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptosp... 50 3e-05 UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella... 50 3e-05 UniRef50_Q3JDF9 Putative uncharacterized protein n=2 Tax=Gammapr... 49 4e-05 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 49 6e-05 UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Provide... 49 6e-05 UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepI... 48 6e-05 UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella Re... 48 6e-05 UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsie... 48 8e-05 UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylo... 48 1e-04 UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax... 47 1e-04 UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root Re... 47 2e-04 UniRef50_C8U7L5 Predicted transcriptional regulator n=3 Tax=Ente... 46 3e-04 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 46 4e-04 UniRef50_D2U4K7 Phage transcriptional regulator n=1 Tax=Arsenoph... 46 4e-04 UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophili... 46 4e-04 UniRef50_O48419 Cro protein n=3 Tax=root RepID=O48419_BPH19 45 7e-04 UniRef50_Q6MB81 Putative uncharacterized protein n=1 Tax=Candida... 45 7e-04 UniRef50_D2U934 Putative uncharacterized protein n=1 Tax=Xanthom... 45 0.001 UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote pr... 44 0.002 UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychro... 44 0.002 UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovo... 43 0.002 UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Ars... 43 0.002 UniRef50_A9EPP3 Putative uncharacterized protein n=1 Tax=Phaeoba... 43 0.003 UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q... 43 0.003 UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemoph... 43 0.004 UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp... 43 0.004 UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickett... 43 0.004 UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopse... 43 0.004 UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax... 42 0.005 UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 42 0.005 UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Esch... 42 0.005 UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_E... 42 0.005 UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus na... 42 0.005 UniRef50_C4SVT1 Putative uncharacterized protein n=2 Tax=Enterob... 42 0.006 UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteob... 42 0.007 UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escheri... 41 0.009 UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti C... 41 0.009 UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chlo... 41 0.010 UniRef50_Q46YP0 Putative uncharacterized protein n=1 Tax=Ralston... 40 0.017 UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovo... 40 0.034 UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Me... 40 0.037 UniRef50_C9Z9U9 Putative DNA-binding protein n=1 Tax=Streptomyce... 39 0.040 UniRef50_Q0AG03 Putative phage repressor n=1 Tax=Nitrosomonas eu... 39 0.042 UniRef50_Q5WH75 Transcriptional regulator n=2 Tax=Bacillus RepID... 38 0.069 >UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMH8_BURVG Length = 94 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K+++ + + + A + G+T +LR V G +KA L +E+ + G +T+ DLRP Sbjct: 17 LKSFFAGIPRSDRDHFAARCGTTAAFLRNVIYGQRKAGEKLCVAIERESGGVVTRRDLRP 76 Query: 61 D----IYPK 65 D I+P+ Sbjct: 77 DDWHLIWPE 85 >UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AS87_9BACT Length = 72 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y LT+ Q+ +LAG+VG++ YL + + +A ++E T G +T+ +LRP Sbjct: 3 LNEYMRELTRSQKEDLAGRVGTSLNYLFQLSGEFSVPGPKIALRIEHATGGQVTRHELRP 62 Query: 61 DIYPKD 66 DIYP++ Sbjct: 63 DIYPEE 68 >UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID=B7UQF7_ECO27 Length = 93 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ + +SL+ ++Q A + G++ GYLR + + L +E+ ++G +T+ LRP Sbjct: 4 LRIFLNSLSSDEQRMFACECGTSIGYLRKALSKGQVLGASLCVLIERASNGEVTRQQLRP 63 Query: 61 ----DIYPK 65 +I+P+ Sbjct: 64 FDWMNIWPE 72 >UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7N1J7_PHOLL Length = 94 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y +L + + LA K+G + YL + +GY +E T+G +T+ DLRP Sbjct: 22 LNDYISNLKRGEAKLLAEKLGVSSSYLSQMAHGYAPVPPARCFDIENATNGKVTRQDLRP 81 Query: 61 D----IYPK 65 I+P+ Sbjct: 82 HDWQKIWPE 90 >UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EFR1_BURCJ Length = 84 Score = 88.8 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K+ +T+E+Q + G+T GY+R + L +E+ + G +T+ DL P Sbjct: 6 LKSLLRQMTREEQAQFCFACGTTLGYMRKALSVGAIFGPALCVSIERESKGLVTRRDLHP 65 Query: 61 ----DIYPK 65 DI+P+ Sbjct: 66 NDWQDIWPE 74 >UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID=YMFT_ECOLI Length = 66 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 66/66 (100%), Positives = 66/66 (100%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP Sbjct: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 Query: 61 DIYPKD 66 DIYPKD Sbjct: 61 DIYPKD 66 >UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum RepID=A3ETJ5_9BACT Length = 70 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 38/66 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + + ++ ++ ++A + +T YL + G+ K + + ++E T G +T+ +LRP Sbjct: 3 LLEWLRQNSQPERLKMAEEAKTTVAYLYKLAGGHGKPGWRICSRIEHATEGQVTRHELRP 62 Query: 61 DIYPKD 66 DIYP++ Sbjct: 63 DIYPEE 68 >UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Escherichia coli RepID=C8UNK0_ECO1A Length = 100 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K + SL + A ++G + YL + +G S A +E T G +++++LRP Sbjct: 3 LKEFIKSLRVGDAKKFAARLGVSSSYLSQMASGRTAISPTRALMIESATEGQVSRAELRP 62 Query: 61 D----IYPK 65 I+P+ Sbjct: 63 HDWELIWPE 71 >UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=A7JSL2_PASHA Length = 66 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + +Y + + + A K+G + YLR V GY LAKK+E+ T+G + KS+LRP Sbjct: 3 LTSYLSDRPRGFKADFAKKLGISKSYLRQVETGYSPMPAYLAKKIEEVTNGEVAKSELRP 62 Query: 61 DIY 63 D++ Sbjct: 63 DLW 65 >UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QXI3_HAEPR Length = 74 Score = 82.7 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K + +SL+ ++Q + A + G+T GYLR + + +E+ + G +T+ L P Sbjct: 4 LKHFLNSLSLKEQRDFAERCGTTLGYLRKSISKKSILGAEICVAIERESKGEVTRKHLVP 63 Query: 61 DI---YPK 65 +P+ Sbjct: 64 HWEFRWPE 71 >UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A1VPJ4_POLNA Length = 187 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + AY +SL+ +Q A + G+T GYLR + ++ L +E+ + ++ LRP Sbjct: 4 LLAYLNSLSPAEQKAFALRCGTTVGYLRKAGSTGQRIGAELCINIERESLKSVVCEVLRP 63 Query: 61 DI 62 DI Sbjct: 64 DI 65 >UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q141U8_BURXL Length = 88 Score = 81.1 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + A+ +SL+ ++ A +T GYLR + ++ L ++E+Y + + DLRP Sbjct: 4 LLAFINSLSPSEREHFASTCRTTIGYLRKAISAGQELRPDLCVRIERYPGCPVGRIDLRP 63 Query: 61 DIYPKD 66 + ++ Sbjct: 64 RDWFEN 69 >UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0AG04_NITEC Length = 83 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y L+ + + A ++ +LR + GY++A +L +E+ + G + LRP Sbjct: 3 LIEYIKKLSISDRNDFAVCCETSFAHLRNIAYGYRRAGELLCINIERESGGLVKCETLRP 62 Query: 61 DI 62 D+ Sbjct: 63 DV 64 >UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=C6RL40_ACIRA Length = 82 Score = 80.0 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +KA+ +L+ + + + A + ++ GYL + G K S LA K+++ + GA++ L P Sbjct: 9 LKAFLANLSLDDRKDFAKRCQTSLGYLNQIMYGNSKCSASLAIKIDKESDGAVSCDLLCP 68 Query: 61 D 61 + Sbjct: 69 E 69 >UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M12 RepID=B0U2N7_XYLFM Length = 81 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 36/64 (56%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y +L +Q A K +T GYLR ++ LA++L++ + G +++ DLRP Sbjct: 4 LRTYLATLIPAEQAHYARKANTTIGYLRKALCKGQRFDGALARRLDEASGGRVSRYDLRP 63 Query: 61 DIYP 64 D++ Sbjct: 64 DVFG 67 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 77.3 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y ++ KE A G++ G L+ V G ++AS LA L++ T G I ++RP Sbjct: 3 LSEYLKTMDKEGLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRP 62 Query: 61 DI 62 DI Sbjct: 63 DI 64 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 76.9 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 35/64 (54%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +KAY+ + Q + A K+G P +L + +G KA +A +E+ T + KS++ P Sbjct: 3 LKAYFSDKPRGFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKKSEILP 62 Query: 61 DIYP 64 D+Y Sbjct: 63 DVYG 66 >UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0N7_9VIBR Length = 64 Score = 76.5 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 35/62 (56%) Query: 2 KAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD 61 K YW L ++ E+A K+ ++ YLRLV G+K LAK L T G + K LRPD Sbjct: 3 KKYWRQLPDVKKAEMAVKLKTSTEYLRLVITGHKVPGAALAKNLHDLTHGEVDKHKLRPD 62 Query: 62 IY 63 I+ Sbjct: 63 IF 64 >UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2HWL5_ACIBC Length = 82 Score = 75.7 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 MKAYWDSL-TKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLR 59 + AY L + + A K G+T G L + G S +L+KK+ + G + SDLR Sbjct: 17 LLAYMKKLGSDSEVQAFAEKCGTTKGNLLQIAYGGS-VSPILSKKISNQSGGEVLLSDLR 75 Query: 60 PDIYPK 65 PDI+ + Sbjct: 76 PDIFSE 81 >UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME19_VIBVY Length = 84 Score = 75.3 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFN-GYKKASFVLAKKLEQYTSGAITKSDLR 59 +KAY SLT ++ A + G+T YLR + + LE+ +SG +++ DLR Sbjct: 4 LKAYLSSLTMPEKESYAIRAGTTLRYLRKIVSIKRTTIHPKTCALLERESSGKVSRKDLR 63 Query: 60 PDIYPK 65 PD + + Sbjct: 64 PDDWFE 69 >UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB3_9BURK Length = 97 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K Y+ S + +LA +G + +L + +G S +EQ T+GA+ + DL+P Sbjct: 3 LKTYFGSSERGTAKKLASSIGVSQSFLSQMASGLSPISQERCFLIEQATAGAVARWDLKP 62 Query: 61 D----IYPK 65 ++P+ Sbjct: 63 HNWHKLWPE 71 >UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii AYE RepID=B0V853_ACIBY Length = 86 Score = 74.2 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + +Y S +KE A G+T L + G S L+K + + + G I+ SDLRP Sbjct: 24 LLSYIKSKSKEDLEVFAKSCGTTVNNLFQIAYGGS-VSATLSKTINKESEGKISLSDLRP 82 Query: 61 DIY 63 D++ Sbjct: 83 DVF 85 >UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=Neisseria gonorrhoeae FA19 RepID=UPI0001AF7BFA Length = 76 Score = 73.0 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y + Q +LA K G +P ++ + G K A +E+ T+G +T+ ++ P Sbjct: 3 LRDYCA--IRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFP 60 Query: 61 D----IYPK 65 D I+P+ Sbjct: 61 DTWHLIWPE 69 >UniRef50_Q1YW30 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YW30_PHOPR Length = 70 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 4 YWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 YW SLT EQ+ +A G + +LR + K+AS LA K+E K LRPDI+ Sbjct: 8 YWRSLTLEQRNIIADLSGCSIWHLRNIGFDGKRASPTLAIKIELACG--YPKEMLRPDIF 65 Query: 64 PK 65 + Sbjct: 66 GE 67 >UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX Length = 91 Score = 71.9 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y Q + G + ++ V GY++ S A ++ + T+ +T +LRP Sbjct: 3 LRDYLKE-KHITQLQFGKLTGLSQVHVSRVLGGYERFSPEKALRVAEVTNFEVTPHELRP 61 Query: 61 DIYP 64 DIYP Sbjct: 62 DIYP 65 >UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1S9_ACIDE Length = 81 Score = 70.3 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 Q LA + P + +G + +E+ T+GA+++ DLRPD I+P+ Sbjct: 15 GSQAGLAKAIDVAPAIVHQWRSGVRPVPVQHCLAIERATNGAVSRRDLRPDDWHLIWPE 73 >UniRef50_Q6LJU5 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q6LJU5_PHOPR Length = 97 Score = 68.4 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 4 YWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 +W + ++ LA +VG+ YLR V + V+A+K+E K LRPDI+ Sbjct: 37 FWREFSVVERKLLAEEVGAAVLYLRNVGKQDVQVGPVMARKIEAACG--YPKELLRPDIF 94 Query: 64 PKD 66 +D Sbjct: 95 GED 97 >UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873AE2 Length = 89 Score = 67.6 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 M + + E+ + G+T GYLR + G K+AS +A LE+ T G +T+ LRP Sbjct: 20 MLDWLKN----TPDEVISRTGTTRGYLRQIAYGNKQASATVASVLERETEGLLTRKSLRP 75 Query: 61 D----IYPK 65 + I+P+ Sbjct: 76 NDWHVIWPE 84 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 66.5 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 31/52 (59%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 Q LA K+G TPG + G + A ++E T+GA+T+++LRPDI+ Sbjct: 12 QTLLARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDIFG 63 >UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M23 RepID=B2I5H4_XYLF2 Length = 86 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 31/50 (62%) Query: 15 ELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 +LA + + L ++ G+K+A L K LE+ T+GA+++ LRPDI+ Sbjct: 23 QLATRAVCSHKTLYMIALGHKRAGHQLVKSLERVTNGAVSRYQLRPDIFG 72 >UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TN00_ACIAC Length = 80 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 14 GELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 G+LA +G + +E+ TSGA+++ DLRPD I+P+ Sbjct: 15 GKLAEAIGVGQSAVSNWRARGTTPDAAYCVAIERATSGAVSRRDLRPDDWHLIWPE 70 >UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=YDAS_ECOLI Length = 98 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q +A +G +P + G ++ +E+ T G + +LRPDI Sbjct: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 >UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli RepID=C8U5T9_ECO10 Length = 114 Score = 59.9 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q +A +G +P + G ++ +E+ T G + +LRPD+ Sbjct: 23 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKGGVLCEELRPDV 74 >UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P4Q9_POPTR Length = 77 Score = 59.9 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Query: 8 LTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP----DIY 63 LT + ELA + G+TP YL V G + A+ LA+++ I SDLRP +I+ Sbjct: 6 LTPQDARELAVRAGTTPAYLYQVLTGRRAANPALARRI-NAADPRILLSDLRPGDWHEIW 64 Query: 64 PK 65 P+ Sbjct: 65 PE 66 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 58.4 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q E+A ++G +P + NG +K ++E+ TSG + +LRPD+ Sbjct: 18 GGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEELRPDV 69 >UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7Y7_XYLFA Length = 101 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%) Query: 5 WDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 W S + + +LA + + + +G K +E+ T A+T +LRPD+ Sbjct: 6 WTSQERGRASQLARMLSVSSTTVANWISGKKPIPPERCPAIERATVRAVTCEELRPDV 63 >UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHG9_9NEIS Length = 66 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 5 WDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 + Q LA ++G P + G K A K+E+ T+ +T+ DLRPD++ Sbjct: 7 LAANVIGSQASLAKELGVHPTTVNSWARGRNKIPAETAIKIEKLTNSVVTRQDLRPDLF 65 >UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator n=2 Tax=Pasteurellaceae RepID=A4NID4_HAEIN Length = 75 Score = 56.1 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 ++ Y++ + LA ++G+ + L G KK +E+ T G +T +LRP Sbjct: 3 LRDYFEKQGRGSLTYLAKQMGAKTSNVCLWAKGKKKVPTNRCPDIERITEGKVTCEELRP 62 Query: 61 DI 62 D+ Sbjct: 63 DV 64 >UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica serovar Enteritidis RepID=Q93E25_SALEN Length = 118 Score = 55.7 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y + +Q LA G + + LV G + S ++ + T+ +T +LRP Sbjct: 3 LDEYLKKN-RVRQSCLATLAGCSQSMISLVTTGRSQLSPEKVLRIAEATNFEVTPHELRP 61 Query: 61 D 61 D Sbjct: 62 D 62 >UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisseria gonorrhoeae RepID=C1HWP2_NEIGO Length = 78 Score = 55.3 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 + LA +G + + ++E+ T GA+ + DLRPD I+P+ Sbjct: 13 GNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPDDWHLIWPE 71 >UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IT79_METNO Length = 83 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 Q +LA G + + + + ++ S +A +E+ T+G I + LRPD + Sbjct: 15 GSQPKLARAAGISQQQVSKLLHCQRQISAGVAIAIEKATAGKIGRWQLRPDYW 67 >UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobacteria RepID=B4EWP1_PROMH Length = 83 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPK 65 Q LA + S + N + +EQ T G +T+S LRPDIYP+ Sbjct: 19 GGQSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRSQLRPDIYPE 73 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 53.8 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 8 LTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 + +A +G T G + K A +E+ T G+IT+ +LRPDI+ Sbjct: 8 KSLGGPTAVARLIGITKGAVSQW----KAIPVDKAILIERATHGSITRQELRPDIF 59 >UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TVQ0_ACIAC Length = 84 Score = 52.6 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 23 TPGYLRLVFNGYKK--ASFVLAKKLEQYTSGAITKSDLRPD----IYPK 65 + +R +GY + S + +EQ T G +T+ DLRP I+P+ Sbjct: 31 SDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPHDWAAIWPE 79 >UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8R3_9GAMM Length = 70 Score = 52.6 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 Q LA K+G T + L A K+E T +++++LRPD++ Sbjct: 17 QKALAKKIGVTQQCISLWITKNAAVPAEHAIKIETETG--VSRAELRPDLFG 66 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 51.8 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 9 TKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 LA +G + + +E+ T+GA+ +LRPD++ Sbjct: 10 KLGSVSALAASLGVRQSAISNWRARG-RVPAERCIDIERVTNGAVICRELRPDVFG 64 >UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QPX1_9RHOB Length = 74 Score = 50.7 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAIT 54 + +Y + +Q + A +VG + G + + NG K LA ++E+ T+G+++ Sbjct: 4 LSSYLKE-KRIRQADFAEQVGVSQGVISRLANGASKPGLDLAVRIERATAGSVS 56 >UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVZ4_9BACT Length = 85 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD 66 Q +LA +G + S K+EQ T G +T+ +LRPD+YPK+ Sbjct: 15 GSQNKLAKILGKRQSVIWAWLKRGT-VSAEYVLKVEQATGGRVTRHELRPDLYPKE 69 >UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PBL8_XYLFA Length = 81 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 Q LA +G P + ++ + +E TS I++ DLRPDI+ Sbjct: 15 GSQKALADLLGIHPALVSQWVTSRRRVAPRHVLTIESATS--ISRHDLRPDIFG 66 >UniRef50_Q3JDF9 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q3JDF9_NITOC Length = 107 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 12/75 (16%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYT-------SGA- 52 +K + TK ++ ++A + YL + ++ AS +A ++E+ T G Sbjct: 13 LKEFLKVATKRERADVAVACSDSVSYLYQIAGEHRYASPWMATQIERQTRVVADLSDGRL 72 Query: 53 --ITKSDL--RPDIY 63 + ++ + P+I+ Sbjct: 73 EPVPRASMVRHPEIF 87 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 6 DSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 S Q ELA ++ + +G + A ++E T+GA+ ++DL P Sbjct: 10 ASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAVNRADLCP 64 >UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6B7_PROST Length = 75 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q +L G T + + K S + + T+G + D+RPD+ Sbjct: 13 GTQKKLGEACGITQQAVFKWLHNKAKVSPEHIPLIVKATNGQVKGKDIRPDL 64 >UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepID=Q2L2G5_BORA1 Length = 87 Score = 48.4 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y + +Q LA +G + G + +E T GA+T+ D P Sbjct: 3 LAEYLSQ-KRGRQIALAKAIGVHAPDVSRWVRGKRPIPLEYGAAIEIATGGAVTRKDEWP 61 Query: 61 D----IYPK 65 D I+P+ Sbjct: 62 DDYRRIWPE 70 >UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella RepID=C5BBP1_EDWI9 Length = 71 Score = 48.4 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 Q ELA G + G KK S + AK++E T G I ++RPD+Y Sbjct: 14 GGQQELARSCGVRQPSVSEWLRGKKKPSAISAKRIELATGGKILAINIRPDLY 66 >UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T869_KLEPR Length = 77 Score = 48.4 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +K Y + + +Q + A VG T GY+ V +G A K T +T DL P Sbjct: 3 LKNYLKT-SGVRQQDFAQLVGETQGYVSRVASGKCMLGAATALKWAAATGYQVTPHDLLP 61 Query: 61 DIY 63 +IY Sbjct: 62 NIY 64 >UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KYS5_METC4 Length = 82 Score = 48.0 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 + +L G T G + + S LA K+E+ T AI + LRPD++ Sbjct: 15 GSEAKLGAACGVTQGAIWKAKTAG-RVSGELAVKIEKATRCAIPRWRLRPDLW 66 >UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax=Haemophilus influenzae RepID=C4F662_HAEIN Length = 78 Score = 47.2 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI-YP 64 +Q LA G + + +G + Q T + ++LRPD+ +P Sbjct: 12 GKQKSLAKACGVSQQAVNKWVSGKNNMDVKYIPSIIQATKFEVNPTELRPDVDWP 66 >UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root RepID=C7BGF8_9CAUD Length = 79 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLR- 59 ++ Y + + +LA +G+ L N + +E+ T G + + DL Sbjct: 3 LRTYL-DAERGRLVKLAAAIGAHASDLSAWANKKRPVPIPFGWPIERETDGQVRRVDLFS 61 Query: 60 ----PDIYPK 65 PDI+P+ Sbjct: 62 ADVIPDIWPE 71 >UniRef50_C8U7L5 Predicted transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=C8U7L5_ECO10 Length = 79 Score = 46.4 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y + +Q + A VG + G++ V G A + + T +T +L P Sbjct: 3 LDEYLRQ-SSIRQADFAAIVGVSQGFVSGVITGRYMPQGRKAIEWAKATDWNVTPHELNP 61 Query: 61 DIYPK 65 YP Sbjct: 62 YDYPD 66 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 14 GELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 LA K+G TP +K K+E+ T G + LRPDI Sbjct: 19 SALARKIGVTPWAASKW--NPEKIPEDRCLKIEEITQGQVKAEQLRPDI 65 >UniRef50_D2U4K7 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4K7_9ENTR Length = 76 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLE--QYTSGAITKSDL 58 + Y Q A VG + G++ V G K K +E + T +T +L Sbjct: 3 LNEYLLHKKIS-QTSFATIVGVSQGFISQVIAGKYK--PKGCKAIEWSRATEWLVTPHEL 59 Query: 59 RPDIYP 64 D YP Sbjct: 60 NSDDYP 65 >UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNJ4_STRM5 Length = 143 Score = 45.7 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 16 LAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 LA +G + + + +A +E T +++ DL PDI+ Sbjct: 17 LATHLGVRQSAVSNWRSRG-RVPPAMAIPIESVTG--VSRHDLCPDIFG 62 >UniRef50_O48419 Cro protein n=3 Tax=root RepID=O48419_BPH19 Length = 77 Score = 45.3 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 25/49 (51%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYT 49 + + + E+ LA ++ GYL + G+++AS A ++E+ T Sbjct: 5 LLRWRKEASSEEWKRLAALAKTSVGYLDQIAYGFRRASPDKANRIEEAT 53 >UniRef50_Q6MB81 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB81_PARUW Length = 87 Score = 44.9 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 +K Y + + E A K+G L+ + G +K LA ++E+ G ++ DL Sbjct: 10 LKEYLEEY-QITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGKVSPRDL 66 >UniRef50_D2U934 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2U934_XANAL Length = 84 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFN--GYKKASFVLAKKLEQYTSGAITKSDL 58 + Y +T+ + LA ++P YL + ++ S LA ++E+ T+ L Sbjct: 7 LITYISDMTR--RRALADACATSPDYLWQIATRWQGRRPSPDLAARIEEATAR------L 58 Query: 59 RPDIYPKD 66 P++ PK+ Sbjct: 59 GPEMVPKE 66 >UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CUZ3_CLAM3 Length = 367 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTS 50 ++ D+L Q + A + G + ++ + G + A +E+ T Sbjct: 22 LRETLDALDMS-QVQFAQRCGLSTKHVNQILQGQSAVTPETALLIERVTG 70 >UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FUH4_PSYA2 Length = 84 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 Q ELA +G+ + N KAS K+ + T+ I +LRPDI+P Sbjct: 20 GGQTELANLIGTKQQNVWQWLNRDGKASARYVSKISEKTN--IPSYELRPDIFP 71 >UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPM4_ACIAC Length = 86 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 ++A ++ T + +G ++ LE+ GA+ DLRPD+ Sbjct: 12 GGPAKVAHELRCTVQAVCFWRDGKRQLPAEHCPVLERLNDGAVRCEDLRPDV 63 >UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U108_9ENTR Length = 72 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 19/52 (36%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q LA K G + NG K S L + T G + RPD+ Sbjct: 14 GSQKALAKKCGLAQSTICDWLNGKKPVSPKSVPDLVEVTGGTVPAYRFRPDL 65 >UniRef50_A9EPP3 Putative uncharacterized protein n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9EPP3_9RHOB Length = 85 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 14 GELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 G+ A VG+T + + +G L K++ Q T G +T +DL Sbjct: 18 GQFAKAVGTTTATVSRIADGTVVPRKALMKRINQATGGLVTPNDL 62 >UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q6JIG9_9CAUD Length = 104 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYT-SGAITKSDLRPD 61 Q + A +VG +P ++A +E+ + LRPD Sbjct: 29 QADFARRVGVSPQAASNWIKRDRRAPIEACPFVERAVDDPRVVCETLRPD 78 >UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae NT127 RepID=C9MCU9_HAEIN Length = 81 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 1 MKAYWDSLTK--EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 M Y + + Q LA G + + L NG K + Q T + ++L Sbjct: 4 MSEYVNKAIEICGSQSALARACGVSQPTVNLWLNGGK-MDVKYIPSIIQATKFEVNPTEL 62 Query: 59 RPDI-YP 64 RPD+ +P Sbjct: 63 RPDVDWP 69 >UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC1_METSD Length = 81 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 7 SLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY--- 63 SL + + LA + + + + + +E+ + IT+ ++RPDIY Sbjct: 17 SLIEGGRPALAAALDISEQAIHKWVKSG-RIPTERVRDVEELINFQITRYEMRPDIYGTQ 75 Query: 64 PKD 66 P++ Sbjct: 76 PEN 78 >UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PM33_9COXI Length = 296 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%) Query: 9 TKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + +A K+G ++ G+ K A ++E T G I DL P Sbjct: 12 SLGSVRHMAKKLGIHREHIYAWIKGFSKIPLEYALQIEYLTGGEINWKDLVP 63 >UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MG99_RHOPA Length = 89 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 2 KAY-WDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 +AY + G+LA ++G+T L + G + S L K+ T I +LRP Sbjct: 11 RAYRLRQTPPLKLGDLARRIGTTTANLSRIETGKQALSDALLPKIVAETG--IPARELRP 68 Query: 61 DI 62 D+ Sbjct: 69 DL 70 >UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UTL6_HAES2 Length = 81 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q +LA + + + G K L + T+G +T DLRPD+ Sbjct: 13 GTQTKLAKLCSVSQPSISIWLKGGK-MDVKYIPSLIKATNGEVTPEDLRPDV 63 >UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 Length = 76 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 17/52 (32%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 Q +L + + + K S + T G + +RPD+ Sbjct: 13 GSQKKLGAACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQIRPDL 64 >UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Escherichia coli O103:H2 str. 12009 RepID=C8U3E2_ECO10 Length = 90 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 2 KAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPD 61 Y T Q +A +G TP + F+ ++ + + +T LRPD Sbjct: 4 NDYDKLRTLIAQNAIARNLGVTPQAVNQWFSKNT-IPARFVLRVCEVVAWKVTPHGLRPD 62 Query: 62 IYP 64 +YP Sbjct: 63 LYP 65 >UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_ESCF3 Length = 77 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 Q LA G + +G K+ T G I +D+RPD+ P Sbjct: 16 GSQKRLADLCGVAQPTVWRWLHGGG-IDARYVMKIVSATGGKIKPADIRPDLAP 68 >UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus nasoniae RepID=D2U112_9ENTR Length = 78 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYK-KASFVLAKKLEQYTSGAITKSDLRPDIYP 64 LA +G + + N YK + + + T IT +LRPDIYP Sbjct: 12 GTATRLAAALGVSNMTVSQWKNKYKGRVPVDRVLAIYELTG--ITPHELRPDIYP 64 >UniRef50_C4SVT1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C4SVT1_YERFR Length = 86 Score = 41.8 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + Y + Q A + ++ GY+ + G ++A + T A+T +L Sbjct: 7 LSEYLNRNGIS-QKIFATSINASQGYVSHIVVGRHAPRGIMALNIAAATQWAVTPHELNA 65 Query: 61 DIYP 64 YP Sbjct: 66 IDYP 69 >UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteobacteria RepID=Q1QIT7_NITHX Length = 260 Score = 41.8 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Query: 11 EQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPK 65 Q ELA ++G + + + +E T I++ +LRPD+Y + Sbjct: 14 GGQAELARRIGISQPSVSNW----NRVPAERVIAVEAVTG--ISRLELRPDLYSE 62 >UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LJJ9_ESCF3 Length = 82 Score = 41.4 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Query: 11 EQQGELAGKVGSTPGYL------RLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 Q ELA K+ ++ G+L N K+ L+ +E+ T I+K LRPDI+ Sbjct: 16 GGQSELARKLTASSGHLVKQQHVWNWLNREKRPPAKLSIFIEKTTG--ISKEKLRPDIF 72 >UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti CCM 4915 RepID=C7LJH3_BRUMC Length = 192 Score = 41.4 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Query: 15 ELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD 66 LA +G G+KK ++E T I +LRPDIYP D Sbjct: 136 ALARGLGIKH---HQSVYGWKKIPADYVLRIEALTG--IPCCELRPDIYPPD 182 >UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KSY7_METC4 Length = 77 Score = 41.0 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 18 GKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYP 64 +G G + + + +E + +++ +LRPD+YP Sbjct: 17 KALGDAIGISSQAISQWTECPPRRVLAVEAASG--VSRHELRPDLYP 61 >UniRef50_Q46YP0 Putative uncharacterized protein n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46YP0_RALEJ Length = 80 Score = 40.3 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 26/57 (45%) Query: 2 KAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 K + + ++ +A G+ Y + +G+++ S LA +L + + ++ L Sbjct: 4 KTFIEKFGTDEATRVAVAAGTNYSYFSQIAHGHRRPSVQLADRLVEASGSRLSFEAL 60 >UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CJM5_VARPS Length = 81 Score = 39.5 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%) Query: 30 VFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIY 63 NG + LE + G IT+ +LRP + Sbjct: 36 WTNGLNPFPPYHCRTLEDHFKGQITRKELRPHDW 69 >UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8INW8_METNO Length = 79 Score = 39.5 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRP 60 + AY + + A ++G T L +G ++ + + +++ + T G +T +D Sbjct: 3 LAAYLADREIKD-SDFAARIGVTRQTLWRYKSGERRPEWDVLERISRATDGQVTPNDFLS 61 Query: 61 D 61 D Sbjct: 62 D 62 >UniRef50_C9Z9U9 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z9U9_STRSW Length = 381 Score = 39.1 bits (90), Expect = 0.040, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTS 50 +K ++L Q +LA + G + ++ + G + A LE+ T Sbjct: 23 LKEQLEALGIP-QADLARRTGLSTKHINQIVQGTAVLTPETALLLERATG 71 >UniRef50_Q0AG03 Putative phage repressor n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AG03_NITEC Length = 344 Score = 39.1 bits (90), Expect = 0.042, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 7/69 (10%) Query: 1 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFV--LAK-----KLEQYTSGAI 53 + L E ELA + G + F+G K LA +E +G + Sbjct: 97 LLEVMRELRIESPRELAKFCNVSEGLVSQWFSGQTKLGPKPLLALSKTKFSIEWLLTGKL 156 Query: 54 TKSDLRPDI 62 K R DI Sbjct: 157 PKYSPRSDI 165 >UniRef50_Q5WH75 Transcriptional regulator n=2 Tax=Bacillus RepID=Q5WH75_BACSK Length = 74 Score = 38.4 bits (88), Expect = 0.069, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 5 WDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDL 58 + E+A +VG + GYL + +G ++ S +AK + + ++ + +L Sbjct: 9 LRTKKGYSLEEVAKEVGISAGYLSQIESGKRQVSAEIAKLIAKL--FSVDREEL 60 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.149 0.424 Lambda K H 0.267 0.0456 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 346,241,722 Number of Sequences: 3077464 Number of extensions: 9005898 Number of successful extensions: 22136 Number of sequences better than 1.0e-01: 92 Number of HSP's better than 0.1 without gapping: 113 Number of HSP's successfully gapped in prelim test: 32 Number of HSP's that attempted gapping in prelim test: 22005 Number of HSP's gapped (non-prelim): 145 length of query: 66 length of database: 1,040,396,356 effective HSP length: 38 effective length of query: 28 effective length of database: 923,452,724 effective search space: 25856676272 effective search space used: 25856676272 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 87 (38.0 bits)