Phyre 2 alignment of P77598 with d1j3ea_

Return to main results | Retrieve Phyre Job Id

Job Description | P77598
Confidence | 7.59% | Date | Thu Jan 5 12:30:54 GMT 2012
Rank | 76 | Aligned Residues | 25
% Identity | 24% | Template | d1j3ea_
SCOP info | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | 130 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | I | H | E | H | K | R | Y | Y | Y | T | F | D | N | S | L | L | F | . | . | . | . | . | . | . | T | E | S | I | Q | N | T | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | H | G | R | T | R | V | Y | F | A | A | D | E | Q | T | L | L | K | N | G | N | Q | T | K | P | K | H | V | P | G | T | P
Template Known Secondary structure |  |  | B |  | S | S | S | B |  |  |  | S | S | S |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  | T | T | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions