19/01/2012 11:50:58 : INFO  : Run start: Thu Jan 19 11:50:57 GMT 2012
19/01/2012 11:51:03 : INFO  : Initialised job
19/01/2012 11:51:04 : INFO  : Renaming log file 'phyre2_20120119_115056.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/144310f1db1fb91e/phyre_20120119_115056.log'
19/01/2012 11:51:06 : INFO  : Initialised job:
Sequence
>batch____
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK
KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNS
LLFTESIQNTTQIFPR

19/01/2012 11:51:07 : INFO  : Checked sequence
19/01/2012 11:51:11 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 11:51:13 : INFO  : PSI-BLAST 3 iterations
19/01/2012 11:52:04 : INFO  : PSI-BLAST 5 iterations
19/01/2012 11:52:52 : INFO  : Finished PSI-BLAST
19/01/2012 11:52:54 : INFO  : Running Buildali to generate a3m file
19/01/2012 11:55:33 : INFO  : Converting to HMM
19/01/2012 11:55:35 : INFO  : Calibrating HMM
19/01/2012 11:55:45 : INFO  : Searching HMM database
19/01/2012 11:59:04 : INFO  : Finished buildali
19/01/2012 11:59:06 : INFO  : Predicting secondary structure
19/01/2012 11:59:13 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 11:59:14 : INFO  : Predicting Disordered regions
19/01/2012 11:59:18 : INFO  : Predicted Disorder (Disopred)
19/01/2012 11:59:19 : INFO  : Running memsat_svm check
19/01/2012 12:01:16 : INFO  : Globular protein
19/01/2012 12:01:17 : INFO  : Predicted Transmembrane (memsat_svm) ID '144310f1db1fb91e'
19/01/2012 12:01:19 : INFO  : Initialising fold library search
19/01/2012 12:01:22 : INFO  : Initialised search input
19/01/2012 12:01:24 : INFO  : Building Ensemble models
19/01/2012 12:01:27 : INFO  : Building hh.d2hh8a1.model.1.pdb
19/01/2012 12:01:41 : INFO  : Building d2hh8a1.1.pdb
19/01/2012 12:01:55 : INFO  : Building d3elga1.2.pdb
19/01/2012 12:02:09 : INFO  : Building c2qlxA_.3.pdb
19/01/2012 12:02:21 : INFO  : Building c2qlwA_.4.pdb
19/01/2012 12:02:34 : INFO  : Building d3duea1.5.pdb
19/01/2012 12:02:47 : INFO  : Building c1f8aB_.6.pdb
19/01/2012 12:03:02 : INFO  : Building c2ph7B_.7.pdb
19/01/2012 12:03:17 : INFO  : Building c1irjG_.8.pdb
19/01/2012 12:03:29 : INFO  : Building c2w3nA_.9.pdb
19/01/2012 12:03:42 : INFO  : Building d1x8da1.10.pdb
19/01/2012 12:03:56 : INFO  : Building d1avsa_.11.pdb
19/01/2012 12:04:10 : INFO  : Building c2k7bA_.12.pdb
19/01/2012 12:04:22 : INFO  : Building c3l23A_.13.pdb
19/01/2012 12:04:33 : INFO  : Building c3ec8A_.14.pdb
19/01/2012 12:04:46 : INFO  : Building c3obeB_.15.pdb
19/01/2012 12:04:59 : INFO  : Building d1xk4a1.16.pdb
19/01/2012 12:05:10 : INFO  : Building d1ekja_.17.pdb
19/01/2012 12:05:23 : INFO  : Building d1m39a_.18.pdb
19/01/2012 12:05:37 : INFO  : Building d1g5ca_.19.pdb
19/01/2012 12:05:50 : INFO  : Building c2i18A_.20.pdb
19/01/2012 12:06:18 : INFO  : Finished HH model building
19/01/2012 12:06:20 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 12:07:07 : INFO  : html domain output complete ID '144310f1db1fb91e'
19/01/2012 12:12:11 : INFO  : Run end  : Thu Jan 19 12:12:10 GMT 2012
