BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (374 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SM... 443 e-123 UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacte... 418 e-115 UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacte... 416 e-115 UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium ... 404 e-111 UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y... 398 e-109 UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 ... 397 e-109 UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium ... 392 e-107 UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Al... 387 e-106 UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=De... 387 e-106 UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaer... 386 e-106 UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacter... 385 e-105 UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromon... 384 e-105 UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotener... 383 e-105 UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf pos... 381 e-104 UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Provide... 381 e-104 UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes R... 381 e-104 UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Mo... 380 e-104 UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobac... 380 e-104 UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia ... 380 e-104 UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=He... 378 e-103 UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcu... 377 e-103 UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas au... 377 e-103 UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding prote... 377 e-103 UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas Re... 376 e-103 UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Ric... 376 e-103 UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Ca... 376 e-103 UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=De... 376 e-103 UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Ta... 375 e-102 UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria Rep... 375 e-102 UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces mari... 374 e-102 UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi ... 372 e-102 UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculu... 372 e-101 UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium... 372 e-101 UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermac... 371 e-101 UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=... 370 e-101 UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteob... 370 e-101 UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter... 370 e-101 UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involve... 370 e-101 UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7... 369 e-100 UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella ko... 369 e-100 UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobac... 368 e-100 UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus... 367 e-100 UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella ... 367 e-100 UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6F... 367 e-100 UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicro... 367 e-100 UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS ... 367 e-100 UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alt... 366 e-100 UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacter... 366 e-100 UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcace... 366 e-100 UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomac... 366 1e-99 UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Per... 365 1e-99 UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteo... 365 1e-99 UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella ... 365 2e-99 UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Col... 364 2e-99 UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus naso... 364 2e-99 UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerof... 364 3e-99 UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostri... 364 4e-99 UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3... 363 5e-99 UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteob... 363 5e-99 UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2... 363 7e-99 UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia R... 363 7e-99 UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevi... 362 1e-98 UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces... 362 1e-98 UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicro... 362 1e-98 UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula st... 362 1e-98 UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. ... 362 1e-98 UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding prote... 362 2e-98 UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatro... 361 2e-98 UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes R... 360 6e-98 UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium elige... 359 1e-97 UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 358 1e-97 UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister in... 358 2e-97 UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula m... 358 2e-97 UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia ... 357 3e-97 UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria Rep... 357 3e-97 UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1... 357 3e-97 UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria Rep... 357 4e-97 UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candida... 356 7e-97 UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia Re... 355 1e-96 UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivi... 355 2e-96 UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7M... 354 2e-96 UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium ... 353 7e-96 UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 352 8e-96 UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacter... 352 1e-95 UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomacu... 352 1e-95 UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibr... 352 1e-95 UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Ta... 351 2e-95 UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacter... 351 2e-95 UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_H... 351 3e-95 UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostri... 350 6e-95 UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiacea... 350 6e-95 UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostri... 349 7e-95 UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involve... 349 7e-95 UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium ... 349 8e-95 UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteri... 349 9e-95 UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibactera... 349 1e-94 UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostri... 349 1e-94 UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobac... 348 2e-94 UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpet... 348 2e-94 UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium p... 348 2e-94 UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillu... 348 2e-94 UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter R... 348 2e-94 UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex de... 348 2e-94 UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_4... 347 3e-94 UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Sy... 347 3e-94 UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellac... 347 4e-94 UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga... 347 5e-94 UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bac... 347 5e-94 UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas ... 347 5e-94 UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis ... 346 7e-94 UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacte... 346 7e-94 UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostri... 346 8e-94 UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=... 346 1e-93 UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacteri... 346 1e-93 UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C... 345 1e-93 UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula ba... 345 2e-93 UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogace... 344 3e-93 UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalob... 344 4e-93 UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2T... 343 6e-93 UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium... 343 7e-93 UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus S... 343 7e-93 UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella f... 343 7e-93 UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiob... 342 8e-93 UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coproco... 342 9e-93 UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacter... 342 1e-92 UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 ... 342 1e-92 UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding prote... 342 2e-92 UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium... 341 2e-92 UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Ca... 341 2e-92 UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteri... 341 3e-92 UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas ... 341 3e-92 UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteoba... 341 4e-92 UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular org... 341 4e-92 UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotro... 340 4e-92 UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=... 340 5e-92 UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=De... 340 5e-92 UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcu... 340 5e-92 UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geoba... 340 7e-92 UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales ... 339 1e-91 UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteob... 339 1e-91 UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 337 3e-91 UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae... 337 4e-91 UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacte... 337 4e-91 UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimo... 337 4e-91 UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus... 337 4e-91 UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus... 337 4e-91 UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicro... 337 4e-91 UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchin... 337 5e-91 UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium ros... 336 1e-90 UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium ... 335 2e-90 UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Ca... 334 3e-90 UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillu... 334 4e-90 UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Po... 334 4e-90 UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rh... 334 4e-90 UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Ri... 333 5e-90 UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydro... 333 5e-90 UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultu... 332 1e-89 UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding prot... 332 2e-89 UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteri... 331 2e-89 UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandens... 331 2e-89 UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=A... 331 3e-89 UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacte... 331 3e-89 UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga l... 331 3e-89 UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bactero... 330 6e-89 UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Co... 330 7e-89 UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaeros... 329 1e-88 UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibri... 329 1e-88 UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Rumin... 329 1e-88 UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobuty... 329 1e-88 UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacte... 328 2e-88 UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 ... 327 4e-88 UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finego... 327 4e-88 UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algor... 327 5e-88 UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobaci... 326 6e-88 UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus... 326 7e-88 UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderia... 326 8e-88 UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium ... 326 8e-88 UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecali... 325 1e-87 UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding prote... 325 1e-87 UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding prote... 325 2e-87 UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidet... 324 3e-87 UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiacea... 324 3e-87 UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria Re... 324 3e-87 UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibri... 324 3e-87 UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular or... 324 3e-87 UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 512... 324 3e-87 UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacte... 324 3e-87 UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococ... 324 5e-87 UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas ... 323 5e-87 UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma... 323 6e-87 UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizob... 323 8e-87 UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepI... 323 8e-87 UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coproco... 322 9e-87 UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelag... 322 9e-87 UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Ch... 322 1e-86 UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacte... 322 2e-86 UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=... 322 2e-86 UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacte... 321 3e-86 UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminoc... 321 3e-86 UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostri... 321 3e-86 UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfo... 320 3e-86 UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=... 320 3e-86 UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacte... 320 4e-86 UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bact... 320 4e-86 UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobact... 320 4e-86 UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphing... 320 5e-86 UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Bra... 320 7e-86 UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexac... 319 1e-85 UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerot... 319 2e-85 UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacte... 318 2e-85 UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ... 318 2e-85 UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobi... 318 2e-85 UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia bal... 318 2e-85 UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacte... 317 3e-85 UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttle... 317 4e-85 UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella R... 316 9e-85 UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostri... 316 1e-84 UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundu... 315 1e-84 UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter... 315 1e-84 UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteob... 315 2e-84 UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms Rep... 314 3e-84 UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Seleno... 314 4e-84 UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira ... 314 4e-84 UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus... 314 5e-84 UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=De... 313 6e-84 UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. ... 312 1e-83 UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium ... 312 2e-83 UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribac... 311 3e-83 UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Micro... 311 3e-83 UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostri... 310 4e-83 UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Ca... 310 5e-83 UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Ro... 310 5e-83 UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mo... 309 1e-82 UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacter... 309 2e-82 UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella ... 308 2e-82 UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia... 307 3e-82 UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus ... 307 4e-82 UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacter... 307 4e-82 UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_... 307 4e-82 UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranu... 306 1e-81 UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacte... 306 1e-81 UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus ... 305 1e-81 UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilu... 305 2e-81 UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella R... 305 2e-81 UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria Rep... 305 2e-81 UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia Rep... 304 3e-81 UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobi... 304 4e-81 UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melani... 304 4e-81 UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Ta... 302 1e-80 UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibri... 302 1e-80 UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 302 2e-80 UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminoc... 301 3e-80 UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium ... 301 3e-80 UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistip... 300 4e-80 UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus Re... 300 4e-80 UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding prote... 300 5e-80 UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevote... 299 1e-79 UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5... 299 2e-79 UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis... 298 3e-79 UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxy... 298 3e-79 UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 ... 297 3e-79 UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=B... 297 3e-79 UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=... 297 5e-79 UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella ... 297 5e-79 UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding prote... 297 6e-79 UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Ca... 296 7e-79 UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacil... 296 9e-79 UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID... 295 1e-78 UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobactera... 295 2e-78 UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porph... 294 3e-78 UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales ... 294 4e-78 UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces ... 294 4e-78 UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga ol... 293 7e-78 UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisel... 293 8e-78 UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involve... 293 8e-78 UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfov... 293 9e-78 UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E... 292 1e-77 UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium... 292 1e-77 UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacill... 292 1e-77 UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobac... 292 2e-77 UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus Re... 291 2e-77 UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia... 291 2e-77 UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_D... 291 3e-77 UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibri... 291 3e-77 UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula berm... 291 3e-77 UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Ru... 290 5e-77 UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus ... 290 6e-77 UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria Re... 290 6e-77 UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=... 290 8e-77 UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillu... 289 9e-77 UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alp... 289 1e-76 UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cel... 289 2e-76 UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteo... 288 3e-76 UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella ... 288 3e-76 UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bactero... 287 5e-76 UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus ... 287 6e-76 UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium l... 286 8e-76 UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding prote... 286 9e-76 UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobact... 285 2e-75 UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemma... 285 2e-75 UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacteri... 284 3e-75 UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus Re... 284 3e-75 UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus cu... 284 4e-75 UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Baci... 284 4e-75 UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 355... 284 4e-75 UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho ... 283 6e-75 UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella Re... 282 1e-74 UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding prote... 282 2e-74 UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter... 281 2e-74 UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepI... 280 5e-74 UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces ... 280 5e-74 UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyc... 280 5e-74 UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium j... 280 6e-74 UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella pa... 280 7e-74 UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacte... 280 8e-74 UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerov... 279 8e-74 UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus pla... 279 1e-73 UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella fl... 279 1e-73 UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispor... 279 1e-73 UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibri... 278 2e-73 UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomyceta... 277 4e-73 UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus sal... 277 4e-73 UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachl... 277 5e-73 UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Coryneba... 276 7e-73 UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU 276 8e-73 UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho ... 275 1e-72 UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC 275 2e-72 UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacil... 275 3e-72 UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding prote... 274 3e-72 UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genit... 273 5e-72 UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA... 273 6e-72 UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermoph... 272 1e-71 UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mu... 272 1e-71 UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacter... 272 1e-71 UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax... 272 2e-71 UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conex... 272 2e-71 UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclass... 272 2e-71 UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Ato... 270 4e-71 UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella... 270 5e-71 UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Ac... 270 5e-71 UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria Rep... 270 8e-71 UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax... 269 9e-71 UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiacea... 269 9e-71 UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Ocea... 268 2e-70 UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinom... 268 2e-70 UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidi... 268 3e-70 UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyce... 267 4e-70 UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Coryneba... 267 5e-70 UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatim... 267 6e-70 UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcace... 267 6e-70 UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides... 267 6e-70 UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA... 266 9e-70 UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus rum... 266 1e-69 UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=... 266 1e-69 UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella ... 265 2e-69 UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia deni... 264 3e-69 UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oc... 264 3e-69 UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collins... 264 3e-69 UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella ... 264 4e-69 UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides... 262 1e-68 UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidob... 262 1e-68 UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomyceta... 262 1e-68 UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propioni... 262 2e-68 UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidob... 262 2e-68 UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillu... 262 2e-68 UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding prote... 262 2e-68 UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA... 261 2e-68 UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter... 261 2e-68 UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. ... 261 3e-68 UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS 260 6e-68 UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevi... 260 8e-68 UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter... 259 1e-67 UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcine... 258 2e-67 UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococ... 258 2e-67 UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomyceta... 258 3e-67 UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostri... 257 3e-67 UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas... 257 5e-67 UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteri... 257 7e-67 UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardner... 255 2e-66 UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces c... 255 2e-66 UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pes... 255 2e-66 UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heli... 255 3e-66 UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID... 254 4e-66 UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydroge... 254 5e-66 UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ... 251 4e-65 UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma wh... 250 4e-65 UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavo... 250 6e-65 UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacte... 248 2e-64 UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacter... 248 3e-64 UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli sub... 248 3e-64 UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haem... 247 5e-64 UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9... 246 9e-64 UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family... 245 3e-63 UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus Rep... 245 3e-63 UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=St... 244 4e-63 UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus Re... 244 5e-63 UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacte... 242 1e-62 UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxoba... 242 1e-62 UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longu... 241 4e-62 UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clav... 240 5e-62 UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostri... 239 1e-61 UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bact... 239 2e-61 UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacte... 238 2e-61 UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothr... 238 3e-61 UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonel... 237 5e-61 UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1... 237 6e-61 UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdema... 237 7e-61 UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacter... 235 2e-60 UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacter... 235 3e-60 UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=... 234 3e-60 UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum... 234 4e-60 UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex... 234 4e-60 UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Lep... 234 4e-60 UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID... 233 7e-60 UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacteriu... 230 5e-59 UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum ... 230 8e-59 UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=... 229 1e-58 UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding prote... 229 1e-58 UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacter... 228 3e-58 UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinoge... 228 4e-58 UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax... 227 5e-58 UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipe... 226 1e-57 UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia ex... 226 1e-57 UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escheri... 226 1e-57 UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR 226 1e-57 UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio ... 226 1e-57 UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding prote... 224 5e-57 UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyroc... 221 2e-56 UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 Re... 221 3e-56 UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:... 221 4e-56 UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding prote... 221 4e-56 UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacter... 221 4e-56 UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 ... 217 4e-55 UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirill... 217 6e-55 UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 T... 216 7e-55 UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivor... 216 8e-55 UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinal... 214 4e-54 UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrific... 214 6e-54 UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepI... 213 1e-53 UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_... 212 1e-53 UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira bifl... 212 2e-53 UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding prote... 212 2e-53 UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis... 212 2e-53 UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_R... 211 2e-53 UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1... 210 8e-53 UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU 209 1e-52 UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protei... 209 1e-52 UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter... 209 2e-52 UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii A... 207 6e-52 UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=... 206 8e-52 UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetal... 206 9e-52 UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacil... 206 1e-51 UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium... 205 2e-51 UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococca... 202 1e-50 UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longu... 201 3e-50 UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae Re... 201 3e-50 UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bac... 201 3e-50 UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacter... 200 6e-50 UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteoba... 198 2e-49 UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium Re... 198 3e-49 UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter ... 197 6e-49 UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulo... 195 2e-48 UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter Rep... 195 3e-48 UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepI... 194 4e-48 UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinoge... 194 6e-48 UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A... 193 1e-47 UniRef50_UPI000169347A DNA processing protein DprA, putative n=1... 192 2e-47 UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisn... 192 2e-47 UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidob... 190 7e-47 UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagi... 190 9e-47 UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH 189 2e-46 UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vanniel... 187 7e-46 UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding prot... 186 9e-46 UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative D... 184 5e-45 UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfi... 184 6e-45 UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=ca... 183 1e-44 UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesie... 181 3e-44 UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-... 181 4e-44 UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosu... 180 7e-44 UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammapr... 178 2e-43 UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanoba... 177 7e-43 UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus ... 176 8e-43 UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfo... 175 2e-42 UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding prot... 174 3e-42 UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter ... 174 5e-42 UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteri... 174 6e-42 UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bac... 171 4e-41 UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candi... 170 8e-41 UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammapr... 169 1e-40 UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfo... 169 2e-40 UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YR... 168 4e-40 UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavoba... 166 1e-39 UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID... 165 2e-39 UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acineto... 163 8e-39 UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis... 163 1e-38 UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bili... 162 2e-38 UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=... 161 4e-38 UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microco... 160 7e-38 UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Vei... 160 9e-38 UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involve... 159 1e-37 UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein ... 157 6e-37 UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinel... 157 6e-37 UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 156 1e-36 UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma Re... 156 1e-36 UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involve... 151 4e-35 UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesioc... 147 6e-34 UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involve... 146 9e-34 UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfo... 146 1e-33 UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobact... 144 3e-33 UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycopla... 144 5e-33 UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pu... 143 1e-32 UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter p... 136 2e-30 UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID... 135 2e-30 UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mo... 130 6e-29 UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involve... 130 1e-28 UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplas... 129 2e-28 UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma... 128 3e-28 UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bactero... 125 2e-27 UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 124 6e-27 UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involve... 123 8e-27 UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax... 122 1e-26 UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 T... 121 5e-26 UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma ho... 109 2e-22 UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax... 108 4e-22 UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involve... 107 9e-22 UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseifl... 94 6e-18 UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 ... 91 5e-17 UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=... 86 2e-15 UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium El... 86 3e-15 UniRef50_Q14PF7 Hypothetical dna processing protein smf n-termin... 78 4e-13 UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding prote... 73 2e-11 UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-f... 72 3e-11 UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobac... 72 3e-11 UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermop... 72 3e-11 UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Strepto... 71 9e-11 UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Bur... 69 2e-10 UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1... 69 3e-10 UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquific... 69 4e-10 UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea l... 68 5e-10 UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Strepto... 68 7e-10 UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermom... 66 3e-09 UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfo... 64 9e-09 UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostri... 64 1e-08 UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protei... 63 2e-08 UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rick... 62 3e-08 UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobiu... 62 5e-08 UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfu... 61 7e-08 UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methano... 61 9e-08 UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root Re... 60 1e-07 UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus pl... 60 2e-07 UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycopla... 59 2e-07 UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota ... 59 2e-07 UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduli... 59 3e-07 UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like pr... 57 1e-06 UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiob... 55 4e-06 UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding prote... 55 6e-06 UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobact... 54 6e-06 UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protei... 54 1e-05 UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanoth... 53 2e-05 UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellula... 53 2e-05 UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteri... 52 2e-05 UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteri... 52 2e-05 UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bactero... 52 4e-05 UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bactero... 51 6e-05 UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bactero... 51 8e-05 UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteri... 50 1e-04 UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like pr... 50 1e-04 UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfuri... 50 2e-04 UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrh... 49 2e-04 UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacteri... 49 2e-04 UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobaci... 49 2e-04 UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular orga... 49 2e-04 UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax... 49 3e-04 UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleoti... 49 4e-04 UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax... 48 6e-04 UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacter... 48 7e-04 UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammapr... 47 7e-04 UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=p... 47 7e-04 UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D... 47 8e-04 UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinoco... 47 0.001 UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta pr... 47 0.001 UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=... 47 0.001 UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermoc... 47 0.001 UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candida... 46 0.002 UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax... 46 0.002 UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oc... 46 0.002 UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 ... 46 0.002 UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteri... 45 0.004 UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.004 UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria Re... 45 0.004 UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding prote... 45 0.005 UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma p... 45 0.005 UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bactero... 45 0.005 UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellul... 45 0.005 UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevote... 44 0.006 UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victiva... 44 0.006 UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocar... 44 0.008 UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylo... 44 0.008 UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chloro... 44 0.008 UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfo... 44 0.008 UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protei... 44 0.010 UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorob... 44 0.010 UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=T... 44 0.010 UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacter... 44 0.012 UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding prote... 44 0.012 UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms R... 44 0.013 UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protei... 44 0.013 UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma p... 43 0.014 UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 T... 43 0.016 UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaero... 43 0.016 UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibaci... 43 0.016 UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A... 43 0.019 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 42 0.023 UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardi... 42 0.023 UniRef50_D2NQ58 Predicted transcriptional regulator n=1 Tax=Roth... 42 0.024 UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococ... 42 0.024 UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Lari... 42 0.026 UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermopr... 42 0.027 UniRef50_A2SSU9 Transcriptional regulator, ArsR family n=1 Tax=M... 42 0.028 UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautili... 42 0.031 UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteri... 42 0.033 UniRef50_Q7CRC7 Transcriptional regulator, ArsR family n=4 Tax=A... 42 0.035 UniRef50_C8WHR8 Selenocysteine-specific translation elongation f... 42 0.041 UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=O... 42 0.041 UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congreg... 42 0.046 UniRef50_UPI0001976C16 transcription regulator ArsR n=1 Tax=Bifi... 42 0.048 UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonprot... 42 0.049 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 42 0.050 UniRef50_B1L3F8 Transcriptional regulator, ArsR family n=1 Tax=C... 41 0.050 UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEX... 41 0.052 UniRef50_UPI000050FE02 transcriptional regulator, IclR family pr... 41 0.054 UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=F... 41 0.054 UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=L... 41 0.055 UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator ... 41 0.057 UniRef50_A6WH50 Putative uncharacterized protein n=1 Tax=Kineoco... 41 0.062 UniRef50_Q47Q00 Putative uncharacterized protein n=2 Tax=Nocardi... 41 0.063 UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclass... 41 0.063 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 41 0.064 UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkho... 41 0.068 UniRef50_C7QG65 Putative uncharacterized protein n=1 Tax=Catenul... 41 0.071 UniRef50_A8U8H9 Transcription regulator n=1 Tax=Carnobacterium s... 41 0.074 UniRef50_B1YCR8 Putative uncharacterized protein n=2 Tax=Thermop... 41 0.075 UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglob... 41 0.077 UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga ol... 41 0.078 UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organi... 41 0.078 UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=A... 41 0.080 UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimi... 41 0.082 UniRef50_D2RWW7 Transcriptional regulator, ArsR family n=2 Tax=H... 41 0.085 UniRef50_B8FG12 Transcriptional regulator, ArsR family n=1 Tax=D... 41 0.093 UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteob... 41 0.093 UniRef50_Q1AS97 Putative transcriptional regulator n=1 Tax=Rubro... 41 0.095 UniRef50_D2RR88 Phenylalanyl-tRNA synthetase, alpha subunit n=1 ... 41 0.097 UniRef50_B8GXP7 Transcriptional regulator, ArsR family n=2 Tax=C... 41 0.099 >UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SMF_ECOLI Length = 374 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 374/374 (100%), Positives = 374/374 (100%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI Sbjct: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW Sbjct: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA Sbjct: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA Sbjct: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS Sbjct: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR Sbjct: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRACHVRRTNVFV Sbjct: 361 LRRACHVRRTNVFV 374 >UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacteriaceae RepID=C6C8N1_DICDC Length = 377 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 216/377 (57%), Positives = 272/377 (72%), Gaps = 3/377 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M DTEIWLR+ SI L +V + + ++ L+ +GL RQ RF++F R+ Sbjct: 1 MTDTEIWLRVASIKGLSAHKVVGLVKRIMRERDSAVDFLRASGLDDRQTARFIAFDRRQS 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + WLE + H + SE YPP L + + P +FV G+ L S Q+AVVGSR +S Sbjct: 61 DDVERWLEDSHCHFVTYGSESYPPLLASISSPPPFIFVRGDDCTLSSAQIAVVGSRDNSN 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA + ITSGLA GIDG+AH+AAL G +IAVLG+GL I+P++HA Sbjct: 121 YGEQWGRFFSRELAANRLIITSGLAVGIDGIAHQAALDAGGKTIAVLGSGLRQIYPKKHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +++E GGA+VSEF L PP+A NFPRRNRIISGL GVLV+EA++RSGSLVTAR A Sbjct: 181 ALADAIVENGGAIVSEFLLKTPPIAANFPRRNRIISGLCLGVLVIEASMRSGSLVTARYA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQ R++FALPGP+GNP +EG HWLI+QGA LVT P+++LE L GL WLPD + Sbjct: 241 LEQNRDIFALPGPVGNPMTEGTHWLIQQGAYLVTHPKDVLEQLHNGLQWLPDISSENDEE 300 Query: 301 ---PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + ++ LPF ++LANVGDEVTPVDVVAERAGQPVPEVV++LL+LELAGWIAAVPGG Sbjct: 301 IICSPEAELELPFADVLANVGDEVTPVDVVAERAGQPVPEVVSKLLDLELAGWIAAVPGG 360 Query: 358 YVRLRRACHVRRTNVFV 374 YVR+RRACHVRRT+V V Sbjct: 361 YVRIRRACHVRRTHVLV 377 >UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacteriaceae RepID=B5FJI1_SALDC Length = 374 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 271/374 (72%), Positives = 309/374 (82%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM + LYG+ M+ +A+ + +Q I+ LQ+ GLT RQA+RFL P + Sbjct: 1 MARTEIWLRLMYVGDLYGEAMLNMANSLIRQPQINRTHLQEAGLTARQAERFLQLPAGVL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L WLE P +H + ADSE YPPQL A DYPGA+F++G+ LH+ QLAVVGSR+HSW Sbjct: 61 DETLRWLELPQYHFLCADSEIYPPQLRAIDDYPGAIFIDGDPACLHTCQLAVVGSRSHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRL CE+LA G+TITSGLARGIDGVAH AA+ + G S+AVLGNGL I+PRRHA Sbjct: 121 YGERWGRLLCESLAKSGLTITSGLARGIDGVAHNAAMSMGGKSVAVLGNGLAKIYPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +L+ GGA+VSEFPL PPL +FPRRNRIISGLSKGVLV+EAALRSGSLVTARCA Sbjct: 181 VLAENLIATGGAVVSEFPLSTPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPGPIG+PGSEG HWLIKQGA LVT PE+ILENLQ+GLHWLP ENS YS Sbjct: 241 LEQGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +Q + ALPFPELLANVGDEVTPVDVVAERAGQPVP VV QLLELELAGWIAAVPGGYVR Sbjct: 301 LNQDEAALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRA HVRRTNVFV Sbjct: 361 LRRASHVRRTNVFV 374 >UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium thermocellum RepID=A3DCL8_CLOTH Length = 370 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 191/371 (51%), Gaps = 11/371 (2%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS- 54 M + + W+ L SI + ++ ++ + + L + + Sbjct: 1 MESNLKEWVWLSSIPGIGAVKSRKLLEHFGDIHNVWSATAAELAVLPFLNRKDILNLTNV 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ +E L + + + +I + E YP L D P L+++G + LAVVG Sbjct: 61 KFKQDVERHLENIHKNDIKVITLEDELYPAYLKNIYDPPLVLYMKGTIQE-EEKYLAVVG 119 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + LA G+T+ SG+ARG+D AH AL+V G +IAVLG GL+ + Sbjct: 120 SRRATSYGLDMAKKISRELAECGITVVSGMARGVDSFAHMGALEVKGRTIAVLGCGLDIV 179 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +++E GA +SE+ P+ NFP RNRIISG+S GV+V+EA RSGSL Sbjct: 180 YPYENKKLMENIIES-GACLSEYLPGTTPVPGNFPARNRIISGISLGVVVIEAGERSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA- 293 +TA ALEQGREVFALPG + + S G + LIK+GA +VT ++ILE L Sbjct: 239 ITANFALEQGREVFALPGNVNSIKSTGTNKLIKEGAKIVTGIDDILEELNIYFIEENTKV 298 Query: 294 --PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 +N + + +++ + E +D +A + G + V + L+ LEL G + Sbjct: 299 SFNKNLQDERILRGLDNDEKKVVECLKLESMHIDNIARKTGFGIQLVNSILVMLELKGVV 358 Query: 352 AAVPGGYVRLR 362 +PG +L+ Sbjct: 359 EQLPGKIFKLK 369 >UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y1Y8_CROTZ Length = 381 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 240/374 (64%), Positives = 281/374 (75%), Gaps = 4/374 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM++ SL G+ MVR + A L+ GL ++Q F +P+ + Sbjct: 12 MSPTEIWLRLMAVYSLSGEIMVRAFQRLQNMPGDPAEALRLAGLNIKQRALFFGYPQAKL 71 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E++L WLE P HHL+ A S YP L A +PGAL V G+ AL QLAVVGSR HSW Sbjct: 72 EAALRWLEMPGHHLLTARSAHYPVSLRAIEWFPGALLVAGDPRALTRPQLAVVGSRHHSW 131 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WG FC LA G+T+TSGLA GID +AH++AL+ G +IAVLGNGL ++P RH Sbjct: 132 YGEQWGSKFCYALAESGLTLTSGLALGIDAIAHRSALKAQGKTIAVLGNGLAQVYPARHR 191 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +LA ++EQGGA+VSEFP + P +FPRRNRIISGLS GVLVVEAALRSGSLVTARCA Sbjct: 192 KLAEEIIEQGGAVVSEFPFEAQPRPAHFPRRNRIISGLSVGVLVVEAALRSGSLVTARCA 251 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQGREVFALPGP+GNPG EGPHWLI+QGAI VT P++I++ LQ L WL YS Sbjct: 252 VEQGREVFALPGPVGNPGCEGPHWLIQQGAIAVTHPQDIIDYLQNELPWLKTVN----YS 307 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQ++ ALPFPELLANVGDEVTPVDVVAERAGQPVP V QLLELELAGWIAAVPGGYVR Sbjct: 308 PDQEEGALPFPELLANVGDEVTPVDVVAERAGQPVPLTVAQLLELELAGWIAAVPGGYVR 367 Query: 361 LRRACHVRRTNVFV 374 +RRA HVRRTNVFV Sbjct: 368 VRRAGHVRRTNVFV 381 >UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVQ1_9BACT Length = 367 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 191/365 (52%), Gaps = 7/365 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M + E LRL + + + + + + G+ + A L Sbjct: 1 MTEFEAILRLHMTKGIGARTYQTLVERFGSIAGVFQAVKPELEKLPGIGGKIANAILEES 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ I + E+ N +IP S YP L D P L+V+G L LA+VGS Sbjct: 61 QRVDIHQEIDLAEKNNIKIIPYTSADYPQHLKNLYDPPLVLYVKGNLLETDLIALAIVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++YG F LA +G I SG+ARGID AHK A+ NG +IAVLG GL T++ Sbjct: 121 RRCTYYGLSQAERFARQLAQKGFCIISGMARGIDTAAHKGAISSNGRTIAVLGCGLGTVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L+ +++ Q GAL+SEFP++ PP NFP RNRIISGLS GVLV+E+ L+SGSL+ Sbjct: 181 PKENTVLSENII-QHGALISEFPINTPPDYRNFPPRNRIISGLSLGVLVIESTLKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ ALEQG+EVFALPG + + S+G + LIK+GA L + +I++ L L A E Sbjct: 240 TAQWALEQGKEVFALPGNVDSLYSQGTNKLIKEGAKLTEDITDIIQELGHVADSLCPAGE 299 Query: 296 NSFYSPDQQ-DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ + + + ++ + + +D + + P V + L+ LE+ + + Sbjct: 300 DAALNDPRDLLLNSHEKKIFSLLSSAPIYIDEIIQSTKLPSSIVSSTLMILEIKKLVKQL 359 Query: 355 PGGYV 359 G Sbjct: 360 SGKRF 364 >UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium RepID=B8I3R0_CLOCE Length = 374 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 194/373 (52%), Gaps = 13/373 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E W+ L S+ L + + I + + GLT + + L+ Sbjct: 1 MREIEYWIWLTSLEGLSSKKALNLLETYRNPEVIYGLSESELQNTRGLTEKNVKELLNSN 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R+ + S L + N ++ E YP +L D P AL+ G L + SF +AVVGS Sbjct: 61 KRERVGSIYQMLVRYNIKMVNIFEENYPQKLKNIYDPPIALYYRGNLDS-DSFSIAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R LA RGVTI SGLARGID +AHK L G +IAVLG+GL+ I+ Sbjct: 120 RRTTGYGANTARKLSYDLAMRGVTIVSGLARGIDSIAHKGCLDAGGKTIAVLGSGLDNIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L +++ GG +SE+P +PPL +NFP RNRIISG+S GV+V+EAA RSGSL+ Sbjct: 180 PPENAGLFKDIIDSGGLALSEYPPGMPPLQHNFPARNRIISGISGGVVVIEAAKRSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA CALEQGREVFA+PG I S G + LIK+GA LV ++LE ++ + Sbjct: 240 TAGCALEQGREVFAVPGNIDCAYSMGTNQLIKEGAKLVLNATDVLEEFEYNGIQNFTPVQ 299 Query: 296 NSFYSPDQQD-------VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + ++ ++L + + +D + ER+ + + L LE+ Sbjct: 300 GDIDEKISKKYLNLFKGLSAGEIKILKVIFNGANNIDEILERSNFSAKDASSILFMLEMK 359 Query: 349 GWIAAVPGGYVRL 361 G I PG + Sbjct: 360 GVIKQNPGKLFEV 372 >UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Alteromonadales RepID=Q21PU2_SACD2 Length = 399 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 137/376 (36%), Positives = 208/376 (55%), Gaps = 17/376 (4%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----------LTLRQAQRFL 53 E + + + ++ + L L ++Q+ Sbjct: 24 IEELILFTRLPGVGAATYWQLLDRFPSIHSALQASPEALKPFLSQEALDTLALVRSQKSA 83 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 S + ++ + WL++ + L+ D YP L P L+V+G +L+ Q+A+V Sbjct: 84 SMAVQQVQRDMDWLQKNDITLVDTDHTAYPELLREIKRTPPLLYVKGCPASLNFPQVAIV 143 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + G + F LA G TITSGLA GID AH+ A++V G +IAV+G G+++ Sbjct: 144 GSRKPTPAGRDTAQAFGSDLAKSGFTITSGLAMGIDAAAHEGAVKVKGRTIAVIGTGIDS 203 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+R++ LA+ ++ GGA+VSEFPL P NFP+RNRI+SGLS GV+VVEAA++SGS Sbjct: 204 VYPQRNSALASEIIANGGAIVSEFPLGTDPQPQNFPQRNRIVSGLSFGVVVVEAAVKSGS 263 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL--- 290 L++AR AL+Q RE+FA+PG I NP S G H LIK+GA LV ++I++ L L Sbjct: 264 LISARYALQQNRELFAVPGSIHNPLSRGCHALIKEGAKLVETSQDIVDELGGFLSRQRDL 323 Query: 291 ----PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 ENS D+ ++LA + TP+D +AER +P+ EV++ LL +E Sbjct: 324 LDIYKQPAENSLPKHDELIANDLEDDVLAKLDYSPTPIDALAERTKKPIGEVMSCLLTME 383 Query: 347 LAGWIAAVPGGYVRLR 362 L G +A + GY+RLR Sbjct: 384 LKGLVANLGAGYMRLR 399 >UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K219_DESAC Length = 363 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 130/364 (35%), Positives = 190/364 (52%), Gaps = 12/364 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M E WLRL + L ++++ H AV Q + + L P ++ Sbjct: 1 MTPQEIFWLRLHLTAGLGRQRLIQLIHHYGSAEAALAVSPQHWAEHAQVKSKSLGTPPEA 60 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L+Q N L + YP L +D P L++ G+ LA+VGS Sbjct: 61 QDPTFQKAVTRLDQLNVRLTSLWDDDYPQALRHISDPPALLYLRGQWPE--KRTLALVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S G+RW TL+ +TI SGLARGID AH+ AL+ G +IAVLG G++ I+ Sbjct: 119 RRCSPAGQRWTEKLAHTLSQHNLTIVSGLARGIDSAAHRGALKGPGSTIAVLGCGIDLIY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L + E+ G +VSE+P P NFP RNRIISGLS+GV+++EAAL+SGSL+ Sbjct: 179 PKENRHLFEQIGEK-GIIVSEYPPGTAPKPGNFPGRNRIISGLSEGVVIIEAALQSGSLI 237 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+VFA+PGP + G LI GA LV +P++IL++ H + Sbjct: 238 TADFALEQGRDVFAVPGPPYDSQVAGCLKLIHDGATLVCQPQDILDHFGLTEHNIA---- 293 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 P ++ +L +G +D +A +G EV +L LEL G ++P Sbjct: 294 VEENEPTVPPLSNSQDMVLRKLGKTPRHLDKLATESGLTPMEVSAIVLHLELLGLAQSLP 353 Query: 356 GGYV 359 GG+ Sbjct: 354 GGHY 357 >UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaerobacterales RepID=B0K1T9_THEPX Length = 362 Score = 386 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 11/356 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRKSIESS 63 + L ++ + V++ + + + + G + Q + + + Sbjct: 9 IWLSTVKGIGYKSFVQLMEFFKTAEEVYKAKEIDIFKAIG-NRKLVQNIIEAQKLNPFDY 67 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + L+ + D E YP +L D P L+++G ++ + +A+VGSR ++YG+ Sbjct: 68 IERLQNLKISVYTLDEEEYPKELKNIYDPPPVLYLKGNINLKDNLCIAMVGSRNATFYGK 127 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + L+ RG+T+ SG+ARGID +H AL+ G +IAVLGNG+N ++PR + +L Sbjct: 128 QVAQKLAYELSERGITVVSGMARGIDSFSHIGALKERGKTIAVLGNGINIVYPRENKKLM 187 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + E+ G LVSEFPLD PPL NFP RNRIISGLS GV+VVEA ++SGSL+TA+ ALEQ Sbjct: 188 EQISEK-GLLVSEFPLDAPPLPQNFPLRNRIISGLSLGVVVVEAGIKSGSLLTAQFALEQ 246 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I + S G + LIKQGA +V E+ILE EN + Sbjct: 247 GREVFAVPGNITSAYSRGTNELIKQGAKIVIGVEDILEEFNLREDVQQKIEENLIF---- 302 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + E+ + + ++ +A + +V L L L G I +PG Sbjct: 303 -PLTEEEKEVYDFICEAPRDIEEIAGYVKIKISKVNAILSSLMLKGMIEKLPGNKY 357 >UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacteria RepID=A5EWL6_DICNV Length = 382 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 198/379 (52%), Gaps = 19/379 (5%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQRFL 53 M D E+ W L + + + A ++ + + Q + Sbjct: 1 MKDDELAAWCALWRAPGVGSKTFHNVLATFGSPTLFFASSDREVQQRFSNIAPEKWQPWH 60 Query: 54 SFPRK-SIESSLCWLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 ++ + L W PN H++ + YP L TD P LFV+G++ L + QLA Sbjct: 61 RAQKETDWQQDLTWCAADPNRHILTLEDARYPALLREITDPPPLLFVQGDVDLLSAPQLA 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVGSR + G + + L G+ ITSG+A GIDG AH+AAL V+G ++AV+G GL Sbjct: 121 VVGSRQPTAAGIQNCTQIAQKLVENGLLITSGMALGIDGAAHQAALAVHGKTLAVVGTGL 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + ++P RH LA + GA+VSEFP+ A++FPRRNRIISGLS GVLVVEA+++S Sbjct: 181 DRVYPARHRELAHQIAA-NGAIVSEFPVGTGVRAHHFPRRNRIISGLSLGVLVVEASIQS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TAR A EQGREVFALPG I NP + G H LI++GA LV E+I+E L Sbjct: 240 GSLITARLAAEQGREVFALPGSIHNPLARGCHQLIREGAKLVESYEDIVEELLPLAKANV 299 Query: 292 D---------APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 + P+N + + LL +G + VD + E+ E+ L Sbjct: 300 ELQQQFQPHHLPQNEPQTHQEYPANSLENRLLNIMGYDPWRVDDLVEKTHLTAAEISAML 359 Query: 343 LELELAGWIAAVPGGYVRL 361 L LEL G +A++ GG + Sbjct: 360 LMLELDGAVASLSGGRYQR 378 >UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromonadales RepID=A1ALE0_PELPD Length = 371 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 125/362 (34%), Positives = 179/362 (49%), Gaps = 9/362 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-----TLRQAQRFLSFPR 57 + W+ L S++ + R+ ++ A + + Sbjct: 9 EELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQ 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E LE+ L+ S YP L +D P L+V+G++ + H +A+VGSR Sbjct: 69 RQAEEECRRLEKSGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRS-HEPAIAMVGSRR 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + E LA GV + SG+ARG+D AH+ AL +G +I VLG G++ I+P Sbjct: 128 ATRYGVQATARLAEELARHGVAVISGMARGVDTAAHRGALAGDGRTIGVLGCGIDRIYPP 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + E+ G LVSEFPL PL NFPRRNRIISGL+ GVLVVEAA +SGSL+TA Sbjct: 188 ENRDLFDEMAER-GCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKSGSLITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + ALEQGR+VFA+PG IG G + LIKQGA LV E++LE L Sbjct: 247 QYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAVSPP- 305 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 P + + + +D + + EV + LL LEL G + +PG Sbjct: 306 -PEPRVFALTPREAGVYELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGA 364 Query: 358 YV 359 + Sbjct: 365 HY 366 >UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT27_METML Length = 370 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 6/361 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSI 60 + +W+ L SIS + ++ +I A L Q ++ A + + Sbjct: 10 EKSLWVSLGSISGIGPQTFCQLLRAFGSPYNIYAASLSQLKEVVSATIANAISNGANQEP 69 Query: 61 ESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + WL N+HLI YP LL +D P L+ +G L L+ +A+VGSR S Sbjct: 70 AAEFTQWLAGANNHLITLADHEYPRALLEISDPPPYLYAKGNLALLNQPSIAIVGSRNAS 129 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE+ F L G+ I SGLA GIDG AH+ AL+ G +IAV+G GL+ ++P +H Sbjct: 130 VQGEKNAEAFAYDLCQHGLCIVSGLALGIDGAAHRGALKAGGATIAVVGTGLDIVYPAKH 189 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + E G L+SEF L P NFP+RNRIISGLS G LVVEA ++SGS +TAR Sbjct: 190 RELAHQIAEH-GLLLSEFALGTPSKPQNFPKRNRIISGLSLGCLVVEANIQSGSQITARM 248 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A EQGRE+FA+PG I +P S+G H LIKQGA LV ++I E L+ L + + Sbjct: 249 AAEQGREIFAIPGSIHSPMSKGCHQLIKQGAKLVDCIQDITEELK--LQPRSNTLISKAS 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + +++A LL +G + P++ + G V EV + L+ LEL G +A++ GG Sbjct: 307 ASQDREIASSEQLLLDTMGFDPAPLERLVTLTGLTVAEVSSMLMLLELDGKVASLTGGQY 366 Query: 360 R 360 + Sbjct: 367 Q 367 >UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=15 Tax=Vibrionaceae RepID=A7K4Z8_VIBSE Length = 369 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 171/365 (46%), Positives = 219/365 (60%), Gaps = 6/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPRKS 59 D WL+L + + G M ++ ++ + LQQ GLT +Q Q + S ++ Sbjct: 7 DDLAAWLKLSCLPGIGGVKMNKLLARDTPRNIVNFSPEQLQQLGLTTKQIQAWASTDKE- 65 Query: 60 IESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 +++ L WLE NHH++ YPPQL P LFV+G L Q+A+VGSR Sbjct: 66 VDACLSWLEASTNHHILTLTDPLYPPQLKQIVAPPPLLFVQGNSTCLSQPQIAMVGSRNA 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G + R F +TSGLA GIDG AH ALQ G +IAVLG+GL I+P R Sbjct: 126 SIDGLQHARHFAAEFVQHDFIVTSGLALGIDGHAHDGALQAKGKTIAVLGSGLENIYPAR 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++E GALVSEF + P NFPRRNRIISGLS GVLVVEAA RSGSL+TAR Sbjct: 186 HRGLAQRVIEH-GALVSEFRPNAKPRPENFPRRNRIISGLSLGVLVVEAAERSGSLITAR 244 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFALP I P + G + LI+ GA LV + +++L+ +Q L W + Sbjct: 245 YALEQGREVFALPASINAPNASGGNQLIRHGACLVEKTKDVLDEIQSLLDWSINQS-TDL 303 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +S + LPFP+LLANVG E TPVD++A R PV EV+ QLLELEL+G + AV GGY Sbjct: 304 FSTLNDEEELPFPQLLANVGSEATPVDILANRTNIPVQEVMMQLLELELSGHVVAVSGGY 363 Query: 359 VRLRR 363 +R R Sbjct: 364 IRKGR 368 >UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6X9Q0_9ENTR Length = 369 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 155/361 (42%), Positives = 223/361 (61%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIWLRL+ ++ + + + + + I+ VL+ GL Q +FL+ I Sbjct: 11 MNELEIWLRLLQVNRISIKTIQTTISLLKQSNKINHTVLKACGLNEIQRLQFLNVSLTRI 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WLE + +I E YP L + P ALF+ G L QLAV+GSR + Sbjct: 71 ERTFRWLESKENQIITFLDEQYPFLLKQIYNPPLALFISGNSELLSERQLAVIGSRQVTE 130 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG++W LF G+TITSGLA GIDG+ H+ AL+ G ++AVLG+GL I+P++HA Sbjct: 131 YGKKWAELFVRKFIGHGLTITSGLALGIDGIGHRVALENQGKTVAVLGSGLAHIYPKQHA 190 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 191 DLAERI-RHEGVLVSEYFPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 249 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ REVF LP P+GNP G HWLI+QGA L+TEP++IL +L+ L+W+ PE + Sbjct: 250 IEQNREVFTLPAPLGNPAFSGNHWLIQQGACLLTEPDDILMHLECSLNWI--QPELEVDA 307 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ L +L VG + TPVD++A + P+ ++++ L ELE+ G I++ GGY++ Sbjct: 308 STATELNLTESRILGMVGYQSTPVDIIAAQLQLPITQIISVLTELEINGVISSAAGGYIK 367 Query: 361 L 361 + Sbjct: 368 V 368 >UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B8CW40_HALOH Length = 409 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 193/370 (52%), Gaps = 14/370 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + L L I+ L + + ++ S I ++ G+ + A++ + Sbjct: 31 MPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGIN-KLAEKIVKQR 89 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +K +IE+ L L + N + YP +L + P ++ +G+ + +A+VGS Sbjct: 90 KKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGKYD-NNERIIAIVGS 148 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R +LA RG I SG ARGID AHK AL+V G +IAVLG GLN I+ Sbjct: 149 RRATRYGCNIARNLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIY 208 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L L+ G L+SE + PLA NFPRRNRIISGL++GV+VVEA+ RSGSL+ Sbjct: 209 PPENKKL-TGLVTDSGYLLSELTPETGPLASNFPRRNRIISGLAEGVIVVEASNRSGSLI 267 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL----- 290 TA A +QG+ +F++PG I P S+G + LIK+GA ++T +++L L L Sbjct: 268 TANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEKPLIKSYN 327 Query: 291 -PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + S + D ++ ++++ + E ++ + G +V LL LEL G Sbjct: 328 RKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKG 387 Query: 350 WIAAVPGGYV 359 I+ G Sbjct: 388 LISPKQGKKY 397 >UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJQ0_MOOTA Length = 361 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 124/363 (34%), Positives = 183/363 (50%), Gaps = 9/363 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + W+ L L ++++ + + GL Sbjct: 1 MEEKPFWVALQQTPGLGARRVLQLVKYFGGARAAWEAPEGELLTLEGLGKGAVSLLNWRR 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + E + L +I + E YPP+L D P L+ G F++A+VG+R Sbjct: 61 QVHPEKIMVSLAAAGIGVITIEEEVYPPELKRIYDPPPVLYWRGSRLPGEGFKIAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + LA GV + SGLARGID AH+ A++ G++ +LG G++ ++P Sbjct: 121 RATAYGLKVAEELAAGLAEAGVGVVSGLARGIDAAAHRGAIKGGGLTWGILGCGVDIVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H L ++E GA++SEFP PP A +FP RNRIISGL+ G +VVEAA RSG+L+T Sbjct: 181 REHRELYRQVMEH-GAIISEFPPGTPPDAGHFPARNRIISGLTAGTVVVEAAARSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFA+PGPI + S+GPH LIKQGA LV+ +ILE + W E Sbjct: 240 ADLALEQNRDVFAVPGPITSRYSQGPHDLIKQGAKLVSGVADILEEYEPRSLWSLPREET 299 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++LA + + +DV+ G P E+ T L+ LE+ I +PG Sbjct: 300 RASVT----LNAIEEKVLAVLEATPSHLDVIMAATGLPAGELNTALIMLEMKQLIRRLPG 355 Query: 357 GYV 359 G+ Sbjct: 356 GFY 358 >UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LER1_SYNFM Length = 386 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 135/363 (37%), Positives = 182/363 (50%), Gaps = 7/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 D WL L + L ++R+ + + ++ GL + Sbjct: 13 DRIAWLALRLVPDLGNRSVLRLINRFGSPRAVLDAEPKELATVEGLRGKAISALQRKEFL 72 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E+ L++ L+ + YP L A D P LFV GEL +AVVGSRA Sbjct: 73 RHPETEWETLQRKGVKLLALNDPEYPSNLSAIPDPPAVLFVRGELQPRDLVAVAVVGSRA 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G + LA GVTI SG A GID AH+ A++ G +IAVLG GL+ +P Sbjct: 133 ASPMGMIFTEKLSGELALNGVTIVSGFAVGIDSAAHRGAIKAGGRTIAVLGCGLDIDYPY 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L + GALV+EFPL PP+A +FP+RNRIISGLS GV+VVEAA RSGSL+TA Sbjct: 193 GQGGLRDEIAAS-GALVTEFPLGTPPVAGHFPQRNRIISGLSLGVVVVEAAHRSGSLITA 251 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-EN 296 R ALEQGREVFA+PG + S GPH L+++GA LV E++LE L+ + P E Sbjct: 252 RLALEQGREVFAVPGMAHHYRSVGPHRLLREGAKLVEGAEDVLEELRPLIRRSAAPPGEP 311 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + L + +D +A PV +V+ L LEL G +PG Sbjct: 312 DERETPVSGLEPDELQALRELDGNPRHIDEIARSTQWPVGKVMAVLSNLELKGVARQLPG 371 Query: 357 GYV 359 Y Sbjct: 372 KYF 374 >UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia RepID=D1P7V1_9ENTR Length = 373 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 152/361 (42%), Positives = 229/361 (63%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIW+RL ++ + + ++ I ++ +++ + +L++ GL Q +F P++ I Sbjct: 15 MNEQEIWIRLSLVNKVALEKVIEIISYLKQRNKVTHSILKECGLNEMQRLQFFHVPQQRI 74 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WL+ + +I + YP L T + P LFV G L Q+A+VGSR + Sbjct: 75 EITTRWLQNKENQMITVSAPQYPFLLKQTYNPPLLLFVIGNSELLSDRQIAIVGSRQMTE 134 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ W + F + + G+TITSGLA GIDG +HK AL+ G ++AVLG+GL ++P++H Sbjct: 135 YGKTWTKNFVKKFISYGLTITSGLALGIDGASHKTALEHGGKTVAVLGSGLANVYPKQHY 194 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 195 NLADEIKE-NGLLVSEYLPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 253 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ R++F LP P+GNP G HWL++QGA L++EP++IL +L+ L+W+ PE S S Sbjct: 254 IEQNRDLFTLPAPLGNPAFSGNHWLVQQGAYLLSEPDDILLHLECSLNWI--QPELSIES 311 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + L +L VG +VTPVDV+A + P+ V++ L ELE++G I + GGY+R Sbjct: 312 TPNSEFNLTENRILGMVGYQVTPVDVIAGQLQLPISRVISILTELEISGDILSTAGGYIR 371 Query: 361 L 361 + Sbjct: 372 V 372 >UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH91_HELMI Length = 378 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 135/371 (36%), Positives = 192/371 (51%), Gaps = 13/371 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 + + W+ L ++ + + + ++ GL+ + +R L R+ Sbjct: 9 ERDSWIALSALPGIGPRRFYALLGHFGTARNAWLAADERWDGVAGLSRQGWERTLQARRR 68 Query: 59 --SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L L Q + + E YP L + D P L+V G+L A A+VG+R Sbjct: 69 ADRVTVLLRRLTQGDIAAVLLIDEQYPALLRSIPDPPPVLYVRGKLTAEDESAFAIVGTR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + LA G T+ SG+ARGIDG+AH++AL+ G +IAVL G++ I+P Sbjct: 129 KPSAYGVKACAAIARDLAQHGRTVVSGMARGIDGIAHQSALEAGGRTIAVLAGGVDVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +LA+ ++EQ GALVSE+P P FP RNRIISGLS GV+VVEA +SG+L+T Sbjct: 189 PEHGKLASRIVEQ-GALVSEYPPGKRPEPGTFPVRNRIISGLSNGVIVVEAGEKSGALIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-- 294 A ALEQGR+VFA+PGPI P S G + LI+QGA LV E+IL+ +Q L AP Sbjct: 248 ADQALEQGRDVFAVPGPITLPQSIGTNRLIQQGAKLVITVEDILDEVQRQLTLPLSAPAH 307 Query: 295 ---ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E + D + +L + E D +A R G EV L LEL G + Sbjct: 308 SSDEQLSENRLSSDQSEAERRILEILDWEPRSADELAARLGLSGSEVAAALTLLELKGRV 367 Query: 352 A-AVPGGYVRL 361 GG+V + Sbjct: 368 QMERGGGFVAV 378 >UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcus RepID=Q2JHL8_SYNJB Length = 385 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 11/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FP 56 + WL I + + R+A + G+ AQ +S P Sbjct: 25 RERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIVSARP 84 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E L + + YPP L D P L+ GE +A+VG+R Sbjct: 85 GLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTR 144 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 A + YG +W + LA G + SGLA GIDG+AH+A L G ++AV+G G++ ++P Sbjct: 145 APTAYGRQWTQKVSAALAEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYP 204 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L +L Q GA++SE+P PP +FP+RNRII+GL + LV+EA SG+L+T Sbjct: 205 AHHQALYRRILAQ-GAILSEYPPGTPPAKEHFPQRNRIIAGLCRATLVMEAPETSGALIT 263 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A A GREV+ALPG I + G LI+ GA ++ EE+L++L + Sbjct: 264 AHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLKQPS 323 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S D Q L G+ + +D +A+ + + + + LL +EL GW+ +PG Sbjct: 324 STGPSDPQQQLLWQLL-----GEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPG 378 Query: 357 GYVRLRR 363 + R Sbjct: 379 MRYQRAR 385 >UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7Y6_TOLAT Length = 374 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 154/364 (42%), Positives = 211/364 (57%), Gaps = 3/364 (0%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WL L +I + ++ + + L G +Q +R+ F ++ + Sbjct: 13 NELALWLHLTNIPGIGPVKGAKLLQQF-PITALSQSQLSDCGWNQQQIERWFDFSPETYK 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + W ++ + +++ D YP L P LFV G+L L+ QLAVVGSR + Sbjct: 72 PIIDWADETSRYILHFDHPSYPALLRNVVGAPLVLFVAGDLAVLNQQQLAVVGSRRPTQD 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + F L +G ITSGLA GID V+H+ ALQ G +IAV G GL ++P +H R Sbjct: 132 GRDAAQSFTSELVRQGFAITSGLASGIDAVSHQTALQQGGRTIAVQGCGLRHVYPAKHKR 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA+ +LEQGGAL+SEF + P A FPRRNRIISGL+ G LV+EAA +SGSL+TARCAL Sbjct: 192 LASQILEQGGALISEFFPETLPRAEYFPRRNRIISGLTVGTLVIEAAEKSGSLITARCAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQ REVFA+PG N + G H LI+QGA LV + +I+E + + E + Sbjct: 252 EQNREVFAVPGRSNNLNARGCHRLIQQGAKLVCDVADIIEEIGIFPRMVEHYGETGPIAE 311 Query: 302 DQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + LPF LL NV DEVT +DV+A + PV EV+T+L+ LEL G I +VPGGYVR Sbjct: 312 EPLS-DLPFYRLLDNVRSDEVTSIDVIAATSRLPVQEVMTELITLELEGLILSVPGGYVR 370 Query: 361 LRRA 364 R A Sbjct: 371 TRSA 374 >UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7H6_PELCD Length = 366 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 184/371 (49%), Gaps = 11/371 (2%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSF 55 M E WLRL L ++R+ ++ + A+ + Sbjct: 1 MTPKEQAWLRLHLTPGLGRAGIIRLMEAFGSPEAALIASPREWQKRARIRAAVAEALPAE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSE-FYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +L L Q ++ E YP L D P L++ G L LAVVG Sbjct: 61 NSPLYLQTLEELTQLEVGILSLWDEKRYPALLRTIYDPPALLYIRGTLTE--QPGLAVVG 118 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + + C LA +G+ I SGLARGID AH+ AL G ++AVLG G++ I Sbjct: 119 ARKATVAARQNTHHLCRQLAAQGIAIVSGLARGIDRSAHEGALAAGGHTVAVLGCGIDRI 178 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +L+QGGA++SE+P PPLA +FP RNRIISG+ + VLVVEAA RSGSL Sbjct: 179 YPAENKQLFNDILDQGGAILSEYPPGAPPLARHFPGRNRIISGICRAVLVVEAAQRSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREVFALPGPI NP S G + L+K GA LVTE +IL+ G P Sbjct: 239 ITAEFALEQGREVFALPGPICNPASHGTNQLLKDGAHLVTEAADILQIFMPGRSAPECVP 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + ++ ++ + D VD +A + G EV LL LEL + Sbjct: 299 ADDGMVK---KLSGTALKVYQALQDTPLHVDELARKCGLTPMEVSAILLHLELEDGAIQL 355 Query: 355 PGGYVRLRRAC 365 PG +R+ Sbjct: 356 PGMRFVRKRST 366 >UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas RepID=A0KEX2_AERHH Length = 371 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 162/368 (44%), Positives = 216/368 (58%), Gaps = 8/368 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVA----KQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 +WL L +++ + R+ D L+ GL Q Q+ + +P+ Sbjct: 8 LALWLTLDAVTGIGPVTAARLLAHFGGDIVTLFDTDDGALRALGLQSVQVQQ-MRWPQPV 66 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +E +L W +P +HL+ D YP L P L+ G L AL QLA+VG+R + Sbjct: 67 VEQALSWAAEPGNHLLCPDDPAYPALLKEIPAAPLLLYCRGNLAALSVPQLAMVGTRHPT 126 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G+ C L G+ ITSGLA GIDGV H+ AL G ++AVLG+GL+ ++P+RH Sbjct: 127 YAGKDNAARLCSELVACGLAITSGLALGIDGVCHQQALAAGGTTLAVLGSGLDCLYPKRH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA +L +GG L+SE D PLA +FPRRNRIISGLS G LVVEAA +SGSL+TAR Sbjct: 187 QGLAMEILVRGGLLISELAPDKGPLAEHFPRRNRIISGLSLGTLVVEAAEQSGSLITARY 246 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREVFA+PG N + G + LI+QGA LV +I+E L + L + S + Sbjct: 247 ALEQGREVFAVPGAPQNVQALGCNKLIQQGAKLVLSAADIVEELPGFVGLLQQVADLSEH 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 S + LP+ +LL NV E T VD VAER+ PV V+ +L+ELELAG + AV GGYV Sbjct: 307 SNNS---ELPYADLLDNVDYETTSVDTVAERSQLPVEVVLGRLVELELAGAVMAVAGGYV 363 Query: 360 RLRRACHV 367 R RRA HV Sbjct: 364 RARRANHV 371 >UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Rickettsiella grylli RepID=A8PP37_9COXI Length = 384 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 142/378 (37%), Positives = 196/378 (51%), Gaps = 19/378 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRK 58 + WL L +I + + I + L Q G+ A + + Sbjct: 6 DEIGYWLALYTIPQCGIHTALLLLKKFKTPKEILSASYDELIQAGIRPTLASHLKNPDWE 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 +E L WLEQP + + + YP L D P LF++GE+ L LA+VG+R+ Sbjct: 66 RVELGLHWLEQPQNSIFHWGHDAYPSLLNEIADPPLILFMKGEVSILQRQMLAIVGARSP 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + G L +G I SGLA+GIDG AH+ AL +IAVLG+G+ I+P Sbjct: 126 TPTGREIAYQLANELTEQGFVIISGLAKGIDGAAHQGALFDKAATIAVLGSGIECIYPSC 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++E+GG L+SEF + P A FPRRNRIISGLS GV+VVEA+LRSGSL+TAR Sbjct: 186 HRALANEIVEKGGLLISEFFPNTSPKANYFPRRNRIISGLSLGVIVVEASLRSGSLITAR 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF------------- 285 AL QGREVFA+PG I + S+G H L+K GA LV E+I+++L F Sbjct: 246 YALNQGREVFAIPGSIRSLLSQGCHALLKDGATLVENCEDIIQSLSFLPQCVLSSDKDNV 305 Query: 286 ---GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 G H + + + +L+ +G E T +D V R P+ V+ +L Sbjct: 306 GVKGGHNKIPRSPLTPQKNQRSSLDSQDKKLVECLGFETTSIDSVLARTKLPITTVLDRL 365 Query: 343 LELELAGWIAAVPGGYVR 360 L+L G+I VPGGYVR Sbjct: 366 SILQLQGYIDKVPGGYVR 383 >UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILA8_ACIBL Length = 385 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 136/367 (37%), Positives = 183/367 (49%), Gaps = 14/367 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LSFPRKSIES 62 WL L L R+ I L + GL AQ L + E Sbjct: 15 WLALSLTPQLGPTRGRRLVEHFGDVERIFRASLTELEASGLPAASAQSIALGKSYELAED 74 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + Q ++ YPP+L+ D P AL V G++ L +AVVG+R + YG Sbjct: 75 EMVKTAQAGAKIVAIGDPEYPPRLMEIYDPPLALRVRGDVSILSKPGMAVVGTRHPTPYG 134 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 LA RGV I SGLARG+D AH+ + G ++AV G G++ I+PR + +L Sbjct: 135 LGMAERLSCDLAARGVIILSGLARGVDTAAHRGTINARGKTVAVFGTGVDEIYPRANKKL 194 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A ++E GGAL+SEFP P NFP RNRIISGLS GVLV+EA SG+ +TARCALE Sbjct: 195 AEQIVEFGGALISEFPTGTFPAPQNFPIRNRIISGLSVGVLVIEAGEYSGTRITARCALE 254 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP- 301 Q REVFA+PG + N S GP+ LIKQGA LV E++ E L + PE Sbjct: 255 QCREVFAVPGNVTNKLSWGPNTLIKQGAKLVATWEDVWEELGSDIRLQIPPPEALATETP 314 Query: 302 ------DQQDVALPFPELLANVG-DEVTPVDVVAERAG--QPVPEVVTQLLELELAGWIA 352 DQ ++ ++ A + DE +D + E+ E+ + L ELE+A I Sbjct: 315 QAASLFDQHEMPAQERKVYALLRADESMHIDELIEKLDGRLSSAEIFSALFELEMASKIR 374 Query: 353 AVPGGYV 359 +PG Y Sbjct: 375 QMPGKYY 381 >UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=Dehalococcoides RepID=Q3Z8J0_DEHE1 Length = 406 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 126/374 (33%), Positives = 189/374 (50%), Gaps = 14/374 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LS 54 M + + + I+ + + + + + GL A+ S Sbjct: 34 MQNQDCKYAIGFSYINGVGRVRLNLLESYFGNLESAWHAGKEALVSAGLDNSLAENIVAS 93 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 P+ + +L L++ + + YP +L DYP +FV+G+L L +VG Sbjct: 94 RPKIDLPKTLETLKRHDIQVFTHTDSDYPARLKQIHDYPPLIFVKGQLLGNDELCLGIVG 153 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG+ E+LA G+TI SGLARGID VAH AAL+ G SIAV G GL+ I Sbjct: 154 TRQPTVYGKLTTEELAESLARSGLTIVSGLARGIDTVAHTAALKAGGRSIAVFGCGLDII 213 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P ++ LA + E GALVSE P + P FPRRNRI+SGL +G+LV EA SG++ Sbjct: 214 YPSENSCLARQIAE-NGALVSEHPPGIRPRPEFFPRRNRILSGLCRGILVTEAGENSGAV 272 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQ RE+FA+PG I + S G + LI++GA LV +++LE L GL +PD Sbjct: 273 ITANFALEQNREIFAVPGSILSAASVGTNRLIQEGAKLVCSAKDVLEELNIGLLSVPDNT 332 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + +L +G E +D + G + V + L +EL G + + Sbjct: 333 TKAVPENQTESL------ILDKLGYEPIHIDQLCRECGLGIALVSSTLAIMELRGQVRSA 386 Query: 355 PG-GYVRLRRACHV 367 G YVR R + Sbjct: 387 GGMNYVRTREKKEI 400 >UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT39_SYNAS Length = 394 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 135/395 (34%), Positives = 198/395 (50%), Gaps = 30/395 (7%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 M + E W+ L S++ + + + Q G+ + A R + Sbjct: 1 MENDELIYWMALRSVNGIGNLGFRSLMDAFKFPHDVFHASYQDLMSVPGIGPKTASRIKA 60 Query: 55 FP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 F + +E L L+Q N H+I YP L DYP L+V+G L +A+V Sbjct: 61 FHEWRRLEYDLKKLQQLNIHVITFHDRHYPSLLKTIYDYPPILYVKGMLK-NDDLNIALV 119 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR S YG LA G+T+ SG+ARGID AH+ AL G +IAVLG GL+ Sbjct: 120 GSRTASTYGVFTTERLARELALNGITVVSGMARGIDSAAHRGALAGRGRTIAVLGCGLDI 179 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P + L + GA++SE L PP A NFP RNRIISGLS GV++VEA RSGS Sbjct: 180 VYPPENKNLYEKIAA-DGAVISELALGTPPNAPNFPLRNRIISGLSLGVVIVEANERSGS 238 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-----H 288 L+TAR ALEQGREVFA+PG I + GS G H LIK+GA L+ +ILE + + + Sbjct: 239 LITARIALEQGREVFAVPGNIDSHGSRGSHKLIKEGAKLIENVGDILEEIIPQIERRREN 298 Query: 289 WLPDAPENSFYSPDQ---------------QDVALPFPELLANVGDEVTPVDVVAERAGQ 333 L + E + + ++ + + + D+ +D++ E++G Sbjct: 299 NLLNEQEKNTETSEKKVSCETRSCSAASIFPSFSENEALIFNLLTDKPVDIDLIIEKSGL 358 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLR-RACHV 367 + E + LL LEL I +PG + + ++C + Sbjct: 359 NINETLNCLLNLELYEAILQLPGKLYKRKEQSCRI 393 >UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria RepID=B5YKX6_THEYD Length = 368 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 133/365 (36%), Positives = 194/365 (53%), Gaps = 6/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 + L L I + + R+ I + + G+ + +A+R +F + Sbjct: 4 EEIRYCLALNEIKDIGPVLLKRLFSRFGLAKQIFNATIDELAYVEGIGIEKAKRIKNFDK 63 Query: 58 KS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + IE + E + + E YP L D P LF GEL + + L++VGSR Sbjct: 64 WNVIEKLIKLCENRDIAIYSFSDEKYPKLLREIYDPPVVLFCRGELISENDAALSIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R LA G+TI SGLARGID VAH + L G +IA+LG+G++ I+P Sbjct: 124 RLSEYGRRITERLAYDLACLGITIVSGLARGIDSVAHNSTLSAGGRTIAILGSGVSCIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + LA ++ + GA++SEF D P NFPRRNRIISGLS G LV EA + SG+L+T Sbjct: 184 PENKMLAEKII-KNGAIISEFYPDEGPRKENFPRRNRIISGLSFGTLVTEATINSGALIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGREVFA+PG I + SEG ++LI++GA LVT+ E+ILE ++ + L Sbjct: 243 ASFALEQGREVFAVPGNITSKNSEGTNYLIQKGAKLVTKVEDILEEIEQFIPLLKKITTE 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + D +++ N+ +E +D + + G +V+ LL LE+ G I + G Sbjct: 303 LSNETTKTDRLDNDEKIVFNILNEPLYLDEIILKTGMNTAKVLEILLSLEIDGLINKIEG 362 Query: 357 GYVRL 361 YVR Sbjct: 363 KYVRR 367 >UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3Y5_9PLAN Length = 376 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 120/362 (33%), Positives = 184/362 (50%), Gaps = 6/362 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFP 56 ++L I + + + I Q+ G+ + A + Sbjct: 10 QSLLELIQLNLIRGVGPRIRRTLLDQFGSPAQILNAPRQELLNVQGIGTKLADAIIYREA 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + E L + ++ +S YP L D P L+ +G L +A+VGSR Sbjct: 70 KSTAEDELRRCRASGYQILFEESAEYPSLLREMPDPPSLLYCKGSLLPQDELAVAIVGSR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + LA G+T+ SGLARGID AH AL+ G +IAV+ GL I+P Sbjct: 130 KCTHYGLQQAEKIAAALARAGITVVSGLARGIDQAAHTGALKAGGRTIAVMATGLAHIYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L+ ++ Q GA+V+EFPLD P+A FP+RNRIISG S GV+++EA +SG+L T Sbjct: 190 PEHRELSEAVALQ-GAIVTEFPLDQAPVAGLFPQRNRIISGFSMGVVLIEAGRKSGALHT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A EQGREVFA+PG I +P S G H LI+ GA+LV + E+ILE L + A Sbjct: 249 ARHAYEQGREVFAVPGRIDHPASAGCHDLIRDGAMLVRDVEDILEGLGPAKTPVMTAKNR 308 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 ++P + ++ ++L V E ++ + + + +++ L LE+ + +PG Sbjct: 309 EVHTPRELSLSEFERDILNLVTLEPQHLNEIVQSSNLDSSRILSTLTILEMRKVVKRLPG 368 Query: 357 GY 358 GY Sbjct: 369 GY 370 >UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi RepID=A9B0F9_HERA2 Length = 369 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPR 57 M + ++ + + + + + + GL R Q + Sbjct: 1 MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +E+ L + + N ++ +P L P L++ G L + +A+VG+R Sbjct: 61 HLDLEAELRTIAEQNIKVVLQTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG F LA G+T+ SGLA GID +AH+ AL NG ++AVLG+GL I+P Sbjct: 121 NPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTALDNNGRTLAVLGSGLQQIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H +LAA + Q GAL+SE+ PL+ NFP RNR+ISGLS +VVEA RSG+L+T Sbjct: 181 SQHRQLAAD-VSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQGR+VFA+PG I + S+GP+ LI GA + E++LE L + Sbjct: 240 ARFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLH------QAQA 293 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 LL ++ + T +D + G ++ L +EL G + V G Sbjct: 294 QQTVSTIVPETPAEALLLPHLSGQPTHIDELGRSCGLAAHDLAATLGLMELKGMVRHVGG 353 Query: 357 GYVRLRRAC 365 + L R Sbjct: 354 MHYVLARET 362 >UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDL9_THET1 Length = 365 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 121/363 (33%), Positives = 183/363 (50%), Gaps = 12/363 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVA---KQSHIDAVVLQQTGLTLRQAQRFLSFPRK- 58 D W+ I S+ + ++ + +A+ L+ + + L + Sbjct: 9 DLPYWIAFSRIPSIGPARIRKLLAHFGGLQRAWEANALELKAAEMDDKSIGIILKARKSI 68 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + L LE DS YP L + P ++V+G++ +AVVG+R Sbjct: 69 NPHLELEKLESRGIKPYAYDSPGYPRLLSYVPNPPVVIYVQGDIVQEDECSVAVVGTRKA 128 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG L GVT+ SGLARGID AH+AAL+ G +IAVLG+GL+ ++P Sbjct: 129 TAYGREVVSRIVTGLVMNGVTVVSGLARGIDSYAHRAALEAGGRTIAVLGSGLDQVYPWE 188 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +LA ++ + GALVSE+PL P A NFP RNRII+GLS V+V+EA ++SG+L++A Sbjct: 189 NKKLADDIV-RSGALVSEYPLGTRPEARNFPPRNRIITGLSLAVVVIEADMKSGALISAG 247 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A +QGREV A+PG I +P S G ++LI+QGA LV+ E+ILE L L + Sbjct: 248 FAAQQGREVMAVPGSILSPTSAGTNYLIQQGAKLVSRVEDILEELDIDRVSLESNSRSIV 307 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 LL +G E +D +A + P+ V L +E+ G + G + Sbjct: 308 TD------DPTEQALLDVLGTEPKHIDDIAFESNMPIAVVSATLTMMEIKGIV-RSNGMF 360 Query: 359 VRL 361 L Sbjct: 361 YSL 363 >UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9A2_9GAMM Length = 368 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 137/367 (37%), Positives = 192/367 (52%), Gaps = 8/367 (2%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR- 57 M D E WL L I L + R+ + I + + A+ Sbjct: 1 MKDDETRAWLALSRIPHLPRRVLHRLILATSSAEEIFQLSAFELTAAKVGAEAQKMLREG 60 Query: 58 ---KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + +E ++ + L+P S YP L D P L++ G+L L LA+VG Sbjct: 61 VDLRQVEQDFKTVQLQHIKLLPVSSTLYPALLKEINDPPPLLYIRGDLSVLDLPSLAMVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G F LA G +I SG+A G+D H+ AL G ++AVLG G++ + Sbjct: 121 SRRSSQAGGANAFRFARELAGAGFSIVSGMALGVDTQCHRGALAAGGSTVAVLGTGIDIV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PRR+ L S++ Q GA++SEFP+ P FPRRNRIISG+S GVLVVEAAL+SGSL Sbjct: 181 YPRRNKELFESIVCQ-GAVISEFPMGTDPHPARFPRRNRIISGMSLGVLVVEAALQSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDA 293 +TARCA+EQGREVFA+PG I N GS+G H LIKQGA LV +++E L + P Sbjct: 240 ITARCAMEQGREVFAIPGSIHNSGSKGCHQLIKQGAKLVESVSDVMEELKGWCADAPPVL 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E + +D+ LL +G + +D + +R P+ ++V + LEL G + Sbjct: 300 EEKGAQNKVSKDLHERERLLLDIIGYDPVSIDSLQQRTDWPMHDLVALVTALELRGLLDC 359 Query: 354 VPGGYVR 360 V G Y R Sbjct: 360 VAGSYQR 366 >UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermaceae RepID=Q2S3B9_SALRD Length = 388 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 121/370 (32%), Positives = 180/370 (48%), Gaps = 12/370 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFPRK 58 D + L +S + + + + I Q G+ + A+ L+F + Sbjct: 19 DQRALIGLSLVSGVGPQRLRALLAAFETPTAIFRASRSTLTQVDGVGDQTAEAILTFDDR 78 Query: 59 SI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + L+ +P +L D P L++ G L + VVG+R Sbjct: 79 AAVRREMERADDLGASLVSPWDARFPDRLREIYDPPAFLWMRGTLPEDARPMVTVVGTRR 138 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F LA RG T+ SGLA GID AHK AL G ++AVLG+G+ I+P+ Sbjct: 139 CTDYGRTQAHHFGAELARRGFTVVSGLAYGIDAAAHKGALDAGGRTVAVLGSGVGHIYPK 198 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + E GA++SE+ LD P A +FP RNRI+SGL+ G LVVE+ G+L+TA Sbjct: 199 KHTALAERIAEH-GAVLSEYGLDAEPDAPHFPERNRILSGLALGTLVVESYAEGGALITA 257 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPEN 296 R ALEQ REVFA+PG I S G + LI+ G A LV E +++LE L + PD + Sbjct: 258 RLALEQNREVFAVPGAITKDSSRGTNRLIQNGHAKLVMEVDDLLEELPAVVVDDPDTVDA 317 Query: 297 SFYS-----PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S ++++ L + + +D + E G E + LLELE GW+ Sbjct: 318 ETVSSGAGRDPTEELSGEAERLYDALSETPVHIDALCEETGLSPSEALPTLLELEFQGWV 377 Query: 352 AAVPGGYVRL 361 + G R Sbjct: 378 RQLAGKQFRR 387 >UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=Legionella RepID=A5IAY0_LEGPC Length = 361 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 147/368 (39%), Positives = 209/368 (56%), Gaps = 12/368 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 M + + L L + + ++++ + + +V L++ GL AQ +F Sbjct: 1 MNNLQPLLALNRMKKIGPRTVLKLQKRWPDLNLMFQLSSVDLEEAGLPSWLAQTIKNFDP 60 Query: 58 KSIESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I++ L WL NHH++ DS +YP L D P L+ +GEL AL LA+VGSR Sbjct: 61 DFIKTDLDWLSSSENHHILTWDSPYYPALLKEIADPPFILYAKGELSALTQPNLAIVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R F ++ GV+I SGLA GID AH L+ G +IAVLG G++ I+P Sbjct: 121 NASVTGNENARAFSREISRHGVSIVSGLALGIDAHAHLGCLEGGGKTIAVLGTGIDCIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RRH +LA + E G L+SEFPL PP+A +FP RNRIISGLS +LV+EAA++SGSL+T Sbjct: 181 RRHLKLAEQITE-NGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ R+V A+PG I NP + G H+L++QGA LVT ++L+ L+ H Sbjct: 240 ARMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLDELKIEHHQFAS---- 295 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + +A L+ +G E T +D + R+G + +V + L ELEL G + AVPG Sbjct: 296 ---NKPIFSLASGKENLVKFIGFETTTIDQIIGRSGYSMEQVTSGLAELELKGAVMAVPG 352 Query: 357 GYVRLRRA 364 GY+R Sbjct: 353 GYIRCEYE 360 >UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteobacteria RepID=A8ZW14_DESOH Length = 389 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 184/376 (48%), Gaps = 15/376 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-F 55 M + W L S+ + R+ + + G++ A + Sbjct: 1 MENLTPWFTLKSVPGVGNLLFKRLIDRFGSPEKVLSAARSDLLGVQGISDTLASAIRAHK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +IE L + ++P YP L D P L+V G+L + +++VGS Sbjct: 61 TPDNIEKVLETCARKAISIVPLTDPGYPALLREIHDPPPYLYVWGKLVP-DAGCISIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G+ + SG+ARGID AH AL NG++ AVLG+GL I+ Sbjct: 120 RSPTRYGLSMATQLSGELAAMGLCVASGMARGIDTAAHTGALDNNGLTYAVLGSGLCRIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + Q GA++SEFPL P A++FP RNR+ISGLS G +VVEAA RSGSL+ Sbjct: 180 PPENMELARRIAGQ-GAVISEFPLFAEPDAHHFPLRNRLISGLSLGTIVVEAAARSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD--- 292 TAR A+EQGREVFA+PG I + S G H L+KQGAILV + +++ + L P Sbjct: 239 TARLAMEQGREVFAVPGSITSFKSTGAHGLLKQGAILVEKASDVIAEISPRLAAGPATAP 298 Query: 293 -----APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 A EN + +L + +D +A++A + LL+LEL Sbjct: 299 AASDRADENKHAGKPTPGLDTDEVRVLQTLEPYPVHIDEIAQKAAMAPGKTAGILLQLEL 358 Query: 348 AGWIAAVPGGYVRLRR 363 G++ PG + Sbjct: 359 KGFVTQEPGKRFLINP 374 >UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIT4_9FIRM Length = 357 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 119/363 (32%), Positives = 179/363 (49%), Gaps = 13/363 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M D W+ L +S+L ++R+ + L GL ++ A+ Sbjct: 1 MRDLPFWVALSKVSTLGARRILRLIAYFGTAEKAFLASMDDLLAAGLPVKAARALCDERE 60 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + ++ YP L D P L+ G++ L + +A+VGSR Sbjct: 61 GLDPHRVAEEVHGSGFGVLTLACAGYPLLLAEIYDPPAVLYYRGDIDVLSTPCVAMVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G+T+ SG+ARGID AH AL G +IAVLG G + +P Sbjct: 121 KATEYGKNAALKLAGQLAAAGITVVSGMARGIDTWAHAGALGAGGPTIAVLGCGPDVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +L ++ GG ++SEFP P +FP RNRIISGLS+ +VVEAA +SG+L+T Sbjct: 181 PENLKLREKIV-SGGIILSEFPPGTQPKPGHFPLRNRIISGLSRATVVVEAAEKSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A CALE GREVFA+PG + +P S G H L+K+GA + + +IL L E Sbjct: 240 ADCALEHGREVFAVPGNVNSPYSRGCHRLLKEGAAMAEKAADILAALGMS--------EQ 291 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ +L + E D +A+R G P P++ L+ELELAG + +PG Sbjct: 292 ETAATKAVQLSDTQASVLETLQYEPAHFDEIADRCGLPAPQLAATLVELELAGLLRKLPG 351 Query: 357 GYV 359 + Sbjct: 352 NFF 354 >UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUF8_METI4 Length = 380 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 187/362 (51%), Gaps = 9/362 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFPRK-SI 60 ++LRL+ +S+ +++ + ++ + + GL + ++ K I Sbjct: 17 LYLRLLQAASIGSKTALKMIKALGNIENVFQSSPRNISERCGLPTKMIEKIFKPEEKTWI 76 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + + + ++ + EFYPP L P LF++G++ +A+VG+R + Sbjct: 77 DQQINLCLKQQIDIVCYEEEFYPPLLREIDSPPLLLFIKGKIPKHWQNAIALVGTRNPTP 136 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG + R +A G + SG A GID AH AL NG + AVLG+G++ +P ++ Sbjct: 137 YGIQTARKLAYQIAYAGFPVISGFALGIDTQAHLGALAANGTTWAVLGSGIDHCYPAQNY 196 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L+ + Q G L+SEFP+ P + FP RNRIISGLS GV++VEAA SG+L+TA+ A Sbjct: 197 ELSERISAQ-GLLISEFPMGTAPTRFTFPLRNRIISGLSVGVVIVEAAQGSGALLTAQLA 255 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR VFA+PG I NP S GP+ LIKQGA LV + ++ILE + + + + Sbjct: 256 LEQGRLVFAVPGRIDNPCSFGPNQLIKQGAKLVDQLQDILEEIHYLHPKVKVDSKKMNRK 315 Query: 301 PDQQ---DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +++ + + D+ +D +AE+ V + L+ LE+ + +PG Sbjct: 316 DQTPIAIELSKDERLVYEALNDQEMSLDELAEKTDLAVSVLCPLLIRLEMKKIVQQLPGN 375 Query: 358 YV 359 Sbjct: 376 RY 377 >UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7_FUSMR Length = 356 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 120/368 (32%), Positives = 187/368 (50%), Gaps = 17/368 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M E W RL + L R+ K I + + + L ++ S Sbjct: 1 MGALE-WYRLA-VKKLKDSSFRRVLEKFEKYEDIFKLDKIYLKKYCNLDEEDLEKIYSSK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +I L LE+ L+ + YP +L T P L+ G++ L ++ VVG+R Sbjct: 59 DVNILDELKKLEKNKISLLFIKDKEYPEELKNITKPPIFLYYRGDISLLSGKRIGVVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L GVT SGLA GIDG+ HK L+ G +IAV+G+GL+ I+P Sbjct: 119 RATSYGKIACEKLVRELVENGVTTVSGLANGIDGICHKKTLEFQGKTIAVVGSGLDIIYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ + E+ G L+SE+P+ P AYNFP RNRII G+S+G++V+E+ + GSL+T Sbjct: 179 YENRKIWEEIGEK-GLLLSEYPMGTEPFAYNFPMRNRIIVGISQGIVVIESKAKGGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A ALE+GREVFA+PG I +P SEG + LIK GA LVT+ ++IL + Sbjct: 238 AELALEEGREVFAVPGEIFSPASEGCNTLIKNSGAKLVTDVDDILVEFGW--------NR 289 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ D+ ++ + E +D + E EV++ L++LE+ I ++ Sbjct: 290 EKKLKEEKLDLTDYEKKIYNTLVKE-KNLDEIIEETSMKASEVLSILMDLEVKKIIVSIA 348 Query: 356 GGYVRLRR 363 GG R + Sbjct: 349 GGKYRRKY 356 >UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA05_KANKD Length = 363 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 151/367 (41%), Positives = 206/367 (56%), Gaps = 9/367 (2%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M E+ WL L I ++ + ++ + + + LQ+ G A++ S Sbjct: 1 MEQVELRHWLALSHI-NIGANKLLAFLEAGYAIGQLFELSEQALQEHGFRAGLAKKLSSV 59 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I+ L W + N L+P S YP L D P LFV+G+ L+ Q+A+VGS Sbjct: 60 TDDIIDQDLEWFDSENKSLVPITSRDYPALLREIPDPPKLLFVQGDKSLLNRHQIAIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + G+ F +TLA G +TSG+A G+DG+AH+AAL V +IAV+G GL+ ++ Sbjct: 120 RNPTAQGKDNTCEFAKTLAAAGAVVTSGMALGVDGIAHQAALDVGQPTIAVVGTGLDRVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P RH +A + Q GALVSEF L P A NFP RNRII G+S G LVVEAA+RSGSL+ Sbjct: 180 PARHKEMAIQI-SQQGALVSEFALGTPVNASNFPVRNRIICGMSLGTLVVEAAIRSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+EQGREVFA+PG I N + G H +IKQGA LV EEI+E L W + E Sbjct: 239 TARLAMEQGREVFAIPGSIHNTLARGCHSIIKQGAKLVETAEEIIEELGALATWQTEHNE 298 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + + E+L V D T D + +R+G + V LL LEL +IA+VP Sbjct: 299 QA--EAQDLVLEKEYQEILQYVDDSTTSADTIIQRSGLEIEVVSHMLLLLELNNYIASVP 356 Query: 356 GGYVRLR 362 GGY R+R Sbjct: 357 GGYQRVR 363 >UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobacterium hafniense RepID=B8FRH4_DESHD Length = 389 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 125/366 (34%), Positives = 186/366 (50%), Gaps = 12/366 (3%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE--SSLCWLE 68 +I + + + + Q+ ++ + I L L+ Sbjct: 25 HTIRGVGNSRLRHLIARYGSAVNALQPSKGSQHSPEEHWQQLIAQKCQEINPGEVLEALQ 84 Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 LI + E YP L D P L+ +G L LA+VG+R + YG Sbjct: 85 SQGIKLIIPEEEGYPDLLRQLPDAPPLLYYKGALPVRQE-CLAIVGARKATPYGRAAAEA 143 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 + +A +G+ + SGLARGID AH+ AL G++ AV+G GLN ++P + +LA +L Sbjct: 144 LAKDIAGQGIVVVSGLARGIDAAAHRGALAGKGITWAVMGCGLNHMYPPENQKLAEEILA 203 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 +GGAL SEFP +PP FP RNR+ISG+S+GV+VVEAAL+SG+L+T ALEQGREVF Sbjct: 204 KGGALWSEFPPGMPPEPQFFPARNRLISGMSRGVVVVEAALKSGALITVDFALEQGREVF 263 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEI---------LENLQFGLHWLPDAPENSFY 299 A+PGPI + S+GPH LI+QGA LV E+I +++L S Sbjct: 264 AVPGPIFSQMSKGPHHLIRQGAKLVESFEDIWVEIPAFAGVDHLSPPSPDRGTESVESGK 323 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ ++ ++L + D T +D + + P ++ LLEL+LAG I +PG Sbjct: 324 QEGKRGISSEQQQILNQLSDVPTHIDQITMNSEVPPEQIPLALLELQLAGRIEQLPGQLY 383 Query: 360 RLRRAC 365 L C Sbjct: 384 VLAYKC 389 >UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus RepID=A8MHD0_ALKOO Length = 365 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 101/365 (27%), Positives = 187/365 (51%), Gaps = 10/365 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFL-SFP 56 + I + L I + D+ ++ + + ++ G ++ + + Sbjct: 4 KERNILIWLSHIEGISNKDIEKLIKYFNTLDELWTADVRHIKNALGNRGIIIEKIIKNRN 63 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R+ +++ + E YP +L D P ++++G L+ +A+VG+R Sbjct: 64 REFFSKVFKNIDKYVIECLTIYDENYPEKLRNIYDPPYVIYMKGNKEYLNIPLIAIVGAR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ F + LA G+ SGLA GID +HK AL G ++ VLG GL+ +P Sbjct: 124 KCTAYGKWAAYQFSKELAQWGIGTISGLALGIDTNSHKGALDGTGNTVGVLGCGLDQCYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + RL ++++E G ++SE+PL +PPL ++FP RNRIIS LS GV+V+EA+ +SG+L+T Sbjct: 184 ASNERLMSTMIE-NGCVLSEYPLGMPPLKHHFPARNRIISALSDGVIVIEASEKSGALIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AL+QG++++ALPG I + S+G + LI+ GA ++ + E+++E+L++ E Sbjct: 243 VEYALDQGKDIYALPGNINSLQSKGTNRLIRDGAKILLDIEDVIESLKYRYSISKKQIEK 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S Q++++ + + +D++ E+ L LE+ G+I + G Sbjct: 303 ST----QEELSPLEKRVYEIIRRNPIHIDLLYNETRLHPWELNPILTILEIKGYIIQISG 358 Query: 357 GYVRL 361 + Sbjct: 359 KTFTV 363 >UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella RepID=A8FP77_SHESH Length = 368 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 149/361 (41%), Positives = 217/361 (60%), Gaps = 4/361 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLSFPRKSIESSL 64 WL + ++S L + ++ +++ + + + L +R L+ ++S+L Sbjct: 9 WLVVSAVSGLGPARIQQLLNYMDVEELRQRLEHEKDALPLPESLLKRELAPDFSLVDSAL 68 Query: 65 CWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 WL+ +HH++ D YP L +D P LF++GE L +AVVGSRA + G Sbjct: 69 DWLQSSSHHHIVTLDDPHYPNLLKQISDPPSILFIKGEPDTLLLPSIAVVGSRAATSAGL 128 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + L + G +++SG+A G+DG AH+A + + +IAVLG G+ I+PRRH +L Sbjct: 129 QSAYQLAGELGSIGFSVSSGMAAGVDGAAHQACIDNSAKTIAVLGTGVEVIYPRRHKKLY 188 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + + GA++SEF DV P A NFP+RNRIISGLS G LVVEA RSGSL+TAR ALEQ Sbjct: 189 EKI-QCHGAVISEFWPDVKPYAGNFPKRNRIISGLSLGTLVVEACRRSGSLITARLALEQ 247 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I S+G H L++ GA LV +I+E + + + ++ + + Sbjct: 248 GREVFAVPGNILGGQSQGCHDLLRDGAKLVENAADIIEEVSVLCDFHLEELKSRHHIGGE 307 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 LPF LLA+VG E TP+DVV E +G+ + V+ Q+LELEL GW+A VPGGYVRLRR Sbjct: 308 NASDLPFTSLLASVGYETTPIDVVVEHSGKAIELVLEQMLELELQGWVAVVPGGYVRLRR 367 Query: 364 A 364 + Sbjct: 368 S 368 >UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6FE49_9GAMM Length = 368 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 158/364 (43%), Positives = 223/364 (61%), Gaps = 7/364 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSI 60 + WL L + + G +++ + + + L GL Q Q L+ +SI Sbjct: 6 DKYWLALYDVPKIGGSRALKLLQK-TSLTKLFSGSTRYLHSLGLDTAQQQAVLNPDWQSI 64 Query: 61 ESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + +L WL ++ LIP + YP L P L+VEG + L Q+A+VG+RA S Sbjct: 65 DRNLQWLAAEDNRYLIPITASDYPITLKNIAAPPLLLYVEGNVELLSKPQIAMVGTRAPS 124 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 +YG+R F L +G+ ITSGLA G+D H++ L G +IAVLG GL ++P+RH Sbjct: 125 YYGKRHAHSFAAELVQQGLVITSGLAIGVDSECHRSVLAAKGETIAVLGTGLANVYPKRH 184 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +LA + E+ GALVSEF +FPRRNRI+SGLS GV+VVEAAL SGSL++AR Sbjct: 185 LKLAQQIREK-GALVSEFSPFTQARPEHFPRRNRIVSGLSLGVVVVEAALNSGSLISARY 243 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREVFALPG I NP + G H+LI+QGA L+T+ +I + L + ++ + + + Sbjct: 244 ALEQGREVFALPGAIDNPAAAGCHYLIQQGAKLITQTSDITDELTY-INVRTNFEQTDLF 302 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + D + V+LP +L NVG EVT D++AER+ QPV +V+T L+ELEL W+ AVPGGYV Sbjct: 303 NSDLETVSLPNQTILDNVGYEVTTADLIAERSQQPVSQVLTSLMELELDNWVNAVPGGYV 362 Query: 360 RLRR 363 R +R Sbjct: 363 RSQR 366 >UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWA7_DESBD Length = 367 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 128/367 (34%), Positives = 169/367 (46%), Gaps = 8/367 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGL--TLRQAQRFLSFP 56 M + L L S L R+ D+ GL QA+ Sbjct: 1 MDEFSASLALRHTSGLGPRTWKRLLSHYGDALSAVSDSSFWTARGLVSARVQAEFVRGGW 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R+ + + YP L D P L+ G+L L +AVVGSR Sbjct: 61 REKAADEQRRAQSFGFPAVFFGDRAYPDFLREIPDPPLFLYYLGDLTLLSRPCVAVVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG L+ G+ + SG A+GID AH+ AL+ G +IAVLG GL+ ++P Sbjct: 121 GASRYGVDMAESMSAFLSASGICVVSGFAQGIDRAAHQGALRGVGGTIAVLGTGLDLVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + G +VSEF P NFP RNRI+SGLS GVLVVE AL SGSL+T Sbjct: 181 ASNTDLWKQVAAH-GLIVSEFAPGTRPDGINFPHRNRIVSGLSLGVLVVEGALGSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL Q R+VFALPGP +G H LI+QGA LV E+IL+ LQ L L PE Sbjct: 240 ANLALAQNRDVFALPGPANVKNYQGCHQLIRQGACLVQSGEDILQELQPRLGALC-VPEA 298 Query: 297 SFYSPDQQDVALPFPELLANVGD--EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ P ++ + E VD + R G +V + LL +EL G + + Sbjct: 299 PVPEFLPREPDDPEQRVVHRLLAAGEALHVDTLTRRTGWAANKVSSTLLFMELQGLVRQL 358 Query: 355 PGGYVRL 361 PG Y L Sbjct: 359 PGMYYVL 365 >UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS RepID=A7BSD4_9GAMM Length = 420 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 136/409 (33%), Positives = 193/409 (47%), Gaps = 54/409 (13%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF----PRK 58 + E WL L+ + + VR+ + Q L+ + L + Sbjct: 7 EEEYWLALLRAPGVGPVNFVRLIKNFESPRGVFEAGYGQW-LSFNMKEPLLKYLQYPDWT 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 +IE + WL QPNH+L+ DS YP +L + P LFV G++ L S Q+A+VG+R Sbjct: 66 AIEKDMQWLIQPNHYLLTIDSPEYPSRLREINNPPPVLFVHGDIALLSSQQIAMVGTRKP 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G + + F E L+ +G TITSG+A GID ++H AL +G +IAV G GL+ ++P + Sbjct: 126 SPEGAQTAKEFAEYLSFQGFTITSGMAYGIDAISHWGALACSGKTIAVAGTGLDRVYPAK 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA + E GAL+SE PL P FP R+RI+SGLS G LV+EA +SG+L TAR Sbjct: 186 HHELAHKIAET-GALISELPLGTPVHRSQFPIRSRIVSGLSLGTLVIEAPEKSGALYTAR 244 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A Q REVFA+PG I NP +G H LIK+GA LV +I E L+ H E+ Sbjct: 245 HATNQRREVFAIPGSIYNPLVKGCHQLIKEGAKLVETVADIFEELRPIHHHSVSQTESET 304 Query: 299 YSP------------------------------------------------DQQDVALPF 310 D D+ + Sbjct: 305 KVRVSFPITSTKLTTIEQTDSSNNITIIDKIDSFAIPNEKMAPGNLIKTKNDLSDLEPDY 364 Query: 311 PELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 LL + T +D + E++G ++ + LL LEL G +A GG Sbjct: 365 IRLLGYLEAGPTSIDNLVEQSGLTAGDISSMLLILELRGLVATQSGGLY 413 >UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alteromonadales RepID=Q3IDI0_PSEHT Length = 362 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 144/357 (40%), Positives = 194/357 (54%), Gaps = 8/357 (2%) Query: 7 WLRLMSISSLYGDDMVRIA--HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 WL L ++ ++ H + + L Q GL+ QA L + I Sbjct: 11 WLAFYMCKGLGIKTLLALSKNHSLESLFGLSHQQLLQLGLSANQATNLLHTNWQQITHYE 70 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + N +I YP L P LF +G++ L S Q+A+VGSR + G Sbjct: 71 QLILHNNITVISIFDAAYPEDLKQIASAPLLLFCKGDVSFLTSPQIAIVGSRNATPTGLE 130 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 F L G+TITSG+ARGIDG AHK AL +G +IAVLG G++ +P++H L Sbjct: 131 IAAEFAYQLTLAGITITSGMARGIDGAAHKGALAGSGKTIAVLGTGVDIYYPKQHKLLTN 190 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 +LEQ G LVSEF A+NFPRRNRIISGLS GVL+VEA ++SGSL+T R ALEQ Sbjct: 191 QVLEQ-GLLVSEFLPGTAANAHNFPRRNRIISGLSLGVLIVEAEIKSGSLITVRYALEQN 249 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 +EVFA+PG I NP ++ H+LIKQGA LV +IL+ + F PE S + Sbjct: 250 KEVFAVPGSIKNPLAQASHFLIKQGAKLVENVSDILDEVSFAYQSGFLTPEQSTQTNKDS 309 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 E+L ++G EVT VD + RA P+ +V +LL+LEL I V GY+R+ Sbjct: 310 -----QCEVLNSIGFEVTSVDDIVRRAQWPIDKVQARLLDLELDDQIERVLDGYIRV 361 >UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacteria RepID=A1WZH5_HALHL Length = 388 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 127/365 (34%), Positives = 187/365 (51%), Gaps = 8/365 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 DT L L + + R+ + + L+ GL+ L+ Sbjct: 24 DDTLYALALARVPGVGPRTWSRLMAAFGGPAAVFRAGRSALRSLGLSAATESGILAPDWN 83 Query: 59 SIESSLCWLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + WL+ P HL+ YP +L D P LFV G+ LH Q+A+VGSR Sbjct: 84 AARTDADWLDGPGPRHLLRLAQPGYPRRLAEIPDPPPLLFVTGDPTTLHRPQVAIVGSRH 143 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R LA G+ TSGLA GID AH+ AL+ G ++AV+G + ++P Sbjct: 144 ATASGRDLARNLAGGLARAGIATTSGLATGIDAAAHRGALEAGGTTLAVVGTEPDQVYPA 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH RL A + GA++ E P PLA +FPRRNRI+SGLS GV+V++A SGSL+TA Sbjct: 204 RHQRLHAEITAS-GAVLGELPPGSGPLAAHFPRRNRIVSGLSLGVVVIQAGRHSGSLITA 262 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R A EQGREVFA+PG I +P + G H L++ GA L+ ++IL+ + +AP N+ Sbjct: 263 RLAAEQGREVFAVPGSIHDPLARGCHALLRDGAKLLESIDDILKEFP---GTVCEAPVNA 319 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +L +G + +D + +R+G + + + LL +EL G + AVPGG Sbjct: 320 PSESTSPAADPDEARILEALGHDPLTLDTLQQRSGLTLDRLSSILLTMELKGLLTAVPGG 379 Query: 358 YVRLR 362 + R Sbjct: 380 RYQRR 384 >UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcaceae RepID=B1I254_DESAP Length = 394 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 9/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 + WL + G ++ + V + GL A LS + Sbjct: 25 EERAYWLAWVVAWPAGGRRLLNLLEAVGSARQAWEAEKSELAASGLDSSLADELLSRRSR 84 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 + + Q +I YP L D P LF G S +A+VGSR Sbjct: 85 VDPAAEQERVRQAGIRVITWVDADYPESLRHIYDPPAVLFGLGAFSFQESGPAVAIVGSR 144 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L + G+ + SG+ARGID AH+ AL+ ++AVLG+GL+ ++P Sbjct: 145 RATPYGKATAGRLAAALGSCGLVVVSGMARGIDTAAHRGALESGAPTVAVLGSGLDVVYP 204 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R +A L + GG +++EFPL P A++FP RNRIISGL +GV+VVEA RSG+L+T Sbjct: 205 RENAGLMEKIAASGGLVLTEFPLGSKPEAWHFPVRNRIISGLCRGVVVVEAGERSGALIT 264 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+V A+PG + NP S GP+ LIKQGA LV + +++LE L + Sbjct: 265 AELALEQGRDVMAVPGNVNNPFSRGPNRLIKQGARLVEDAKDVLEELGLTALFPETE--- 321 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S + ++ +L + + + G P+ L LE+ G++ PG Sbjct: 322 SGEAEAVAQLSGEEKRVLEILQGQSLSDQALIRLTGLAAPQTAAVLAYLEIKGFVRRAPG 381 Query: 357 G-YVRL 361 G Y L Sbjct: 382 GLYYSL 387 >UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J600_DESRM Length = 364 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 10/364 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + W+ + G + I H + ++ A++ + Sbjct: 1 MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ +LE+ + ++ D E YP L D P A+FV G L +A++GS Sbjct: 61 KNIQFDNLEKYLEKISCKVLTIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA G+ I SG+ARGID +H+AAL NG+++AVLG G + ++ Sbjct: 121 RKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRAALMNNGMTMAVLGCGPDIVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + +L ++E+ GA+++EFP P ++FP RNRIISGLS V+V+EAA +SG+L+ Sbjct: 181 PRENEKLMKQIIEK-GAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGREV A+PG I NP S G + LIKQGA LVT +IL+ L + + Sbjct: 240 TADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQK 299 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 S + + ++LA + + ++ V + EV L LE+ G I ++P Sbjct: 300 KSKKVT----LEVNEKKVLAVLSEIPQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLP 355 Query: 356 GGYV 359 G Sbjct: 356 GKMY 359 >UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Persephonella marina EX-H1 RepID=C0QTM1_PERMH Length = 352 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 20/365 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPR- 57 M + ++L I + + + + +I + + + A+ L + Sbjct: 1 MSAIDY-IQLSYIKGIGNKTLKLLINTFGSPENIFQLSFSELSSVVGSSVAELILKRDKS 59 Query: 58 --KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K E E+ +I + YP L D P L+ +G L + ++VVGS Sbjct: 60 LKKKAEEEFLRAEKSGVKIIHFNDHSYPELLREIPDPPLYLYCKGRLDL--ARAVSVVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + L+ + V I SG+A GID +AH+ AL+ + ++ AVLG G++ + Sbjct: 118 RRFTSYGKTVTKQIVSYLSDQNVNIVSGMALGIDSIAHETALERSCLTTAVLGCGIDIAY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L ++E GA++SEFP+ PP YNFP RNR ++G+S +V EA+ +SG+L+ Sbjct: 178 PPENKKLYERIIE-NGAVISEFPMGTPPYKYNFPVRNRTVAGISYATIVTEASEKSGALI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GR VF++P I NP ++G + LIK GAI V + E I ENL + Sbjct: 237 TARLANDYGRVVFSVPANINNPLAKGNNILIKDGAIPVVDMESIDENLPYIKRSD----- 291 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +++ ++L + +D+++E+ V +++ L ++EL G I + Sbjct: 292 -----KEEINLSEIEKKIL-FILSSPEHIDIISEKMNISVSDLMVILFDMELKGLITSEN 345 Query: 356 GGYVR 360 G Y+R Sbjct: 346 GIYMR 350 >UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSS8_9GAMM Length = 373 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 194/371 (52%), Gaps = 10/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LSFP 56 M + WLRL +L R+ + + L++ GL+ Sbjct: 1 MDELSAWLRLWLAPNLGAATSARLVSTAGSAPAVLRMRPNQLRECGLSDEAIAFLQAEQS 60 Query: 57 RKSIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 S+ + W+E + LI YPPQL P L V G++ L QLA+VGS Sbjct: 61 PASVAQARDWVEAESARHLIYRGHPDYPPQLEDIARPPAVLAVLGDVSLLRDPQLAMVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ S G R F + LA +G+ +TSGLA GIDG H+ AL G ++AV+ G + ++ Sbjct: 121 RSASRQGAESARAFAKHLAAQGLVMTSGLALGIDGACHEGALASTGSTVAVMATGADRVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +H LA ++ +GGALV+EFPL P +FP+RNR+I+GLS GVLVVEA LRSGSL+ Sbjct: 181 PAKHRDLAHRIVAEGGALVTEFPLGSTPQKSHFPQRNRVIAGLSTGVLVVEATLRSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW-----L 290 TAR A EQGREVFA+PG I P ++G H LIKQGA LV E+ILE L L + Sbjct: 241 TARFAQEQGREVFAMPGSIHQPTAKGCHALIKQGAKLVESAEDILEELAPQLRARLAEGV 300 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + LL +G + +D + ++ E+ + LL LEL G Sbjct: 301 ETSVSASEALSADPPLDSDHEALLQAMGFDPVTLDALVQQTDFDASELASMLLILELEGR 360 Query: 351 IAAVPGGYVRL 361 ++A PGG + Sbjct: 361 VSAEPGGRYQR 371 >UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella RepID=A4IYW5_FRATW Length = 368 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 128/375 (34%), Positives = 200/375 (53%), Gaps = 20/375 (5%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVR----------IAHWVAKQSHIDAVVLQQTGLTLRQ 48 M+D I + L V+ I + + +I + L+Q + Sbjct: 1 MIDNTIKNLIILSITPYFGNTRFVKAKENNFDFNEIIN--SPSKYIKTLSLRQESIDFLN 58 Query: 49 AQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 +++L + ++ WL+ + +I YP L ++ P L+ G L+S Sbjct: 59 QRKYLEY----LDKVSKWLDSSGKNQIITYLDNRYPSDLKQISNPPLILYCSGNSDLLNS 114 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 QLA+VG+R HS YG+ C L +TI SGLA GID +AHK A+ N +IAV+ Sbjct: 115 QQLAIVGARNHSSYGKNVTAKLCADLKDSKLTIISGLAYGIDTLAHKYAIDNNLSTIAVV 174 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G G++ ++P + L ++ G ++SEFPL PL YNFP+RNRIISGLSKGV++VEA Sbjct: 175 GTGVDVVYPSSNRELYNKIINTNGLIISEFPLGTGPLRYNFPQRNRIISGLSKGVVMVEA 234 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 A +SGSL+TA ALEQ +EVFA+PG I + S+G + LIKQGA LV +ILE + Sbjct: 235 ASKSGSLITAELALEQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVCNVNDILEEIDIAS 294 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 + + ++ + + +L ++ E+T +D + ++ P +V + L ELEL Sbjct: 295 NTSQTSSTDNQVNK-IISLNKSERIILGSIDRELTTIDKIIIKSKLPYNQVTSILFELEL 353 Query: 348 AGWIAAVPGGYVRLR 362 I ++PGGY+ ++ Sbjct: 354 KSLIESIPGGYINIQ 368 >UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AU6_COLP3 Length = 383 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 146/376 (38%), Positives = 206/376 (54%), Gaps = 16/376 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVA-----KQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 + E WL L + L + + + +V+ L+++Q F Sbjct: 8 NIEYWLALKFVPRLAIHKKIALVETFGLIALFSLDNKPSVLSSANNLSVKQLHAFHQPDW 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++I + N +I D +YP L D P +F++G L++ Q+AVVGSRA Sbjct: 68 QTITHIIHASAACNSAIICYDDTYYPQLLKQIYDPPLVIFMQGNPLLLNAPQVAVVGSRA 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G C+ LA ITSGLA GID AH+ AL +IAV+ GL+ ++P Sbjct: 128 ASVGGRDTAFKICQQLAQHNFIITSGLALGIDAAAHRGALSEPASTIAVVATGLDQVYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA +++ GA++SEF A +FP+RNR+ISGLS GVLVVEA L+SGSL+TA Sbjct: 188 RHHSLAQKIIDSSGAIISEFVPGTQARAGHFPKRNRLISGLSLGVLVVEAELKSGSLITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN----------LQFGL 287 RCALEQ R+VFA+P I N ++G HWLIKQGA LV + +I++ L+ L Sbjct: 248 RCALEQNRDVFAIPSSIENKQAKGCHWLIKQGAKLVEQCADIIDEFAFADKPSLHLKSEL 307 Query: 288 HWLPDAPENSFYSPDQQDVA-LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 L A ++ D+ + L LL +VG E+TPVD V R+ PV EV+T+L LE Sbjct: 308 KPLKSATHSTHKGGDEINQKVLCNDALLDSVGFEITPVDKVVLRSELPVEEVLTRLTMLE 367 Query: 347 LAGWIAAVPGGYVRLR 362 L G ++AVPGGY+R + Sbjct: 368 LNGLVSAVPGGYIRTQ 383 >UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVJ2_9ENTR Length = 376 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 166/361 (45%), Positives = 230/361 (63%), Gaps = 5/361 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIWLR+ +S L + I + + +++ L+ GL+ Q +F K+I Sbjct: 20 MDPMEIWLRMRMVSHLSTVKITAIVEKLIEINNVKVASLRACGLSPHQCVQFTHANSKAI 79 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +++ WL+ H LI YP L P LFV G+ AL S Q+A+VGSR + + Sbjct: 80 YAAMKWLDVSEHKLITLSDPNYPYLLKQIYSPPIILFVAGKEKALSSTQIAMVGSRYNDF 139 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+W ++F + L TITSGLA GIDG++HK AL+ NG+++AVLG+GLN ++P +H Sbjct: 140 YGEKWAQIFSQELVMHKFTITSGLAIGIDGISHKTALRNNGITLAVLGSGLNKLYPTQHT 199 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSE+ D PPLA NFPRRNRIISGLSK V+V+ A L+SGSL+TA+CA Sbjct: 200 SLANKIKEK-GALVSEYLPDTPPLAKNFPRRNRIISGLSKAVIVIAAGLKSGSLITAKCA 258 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQG+++FALPG +GN EG HWLI+QGA L + P++I+E+L GL WLP+ S Sbjct: 259 LEQGKDIFALPGALGNSLYEGNHWLIQQGAYLASSPQDIIEHLNSGLKWLPENKILS--- 315 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 D + +L + E TP+D++AER+G V EV QLLE EL G + V GGY+R Sbjct: 316 -DNLHIDNSMNNILRYINFEPTPIDLIAERSGLSVIEVSAQLLEFELMGKVIFVSGGYIR 374 Query: 361 L 361 + Sbjct: 375 V 375 >UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C896_9FIRM Length = 383 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 24/379 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID-----AVVLQQTGLTLRQAQRF-LSF 55 ++ E WL LMSI ++ + + + I + +G+TL A R + Sbjct: 1 MNIEKWLWLMSIQNIGAKRAINLYDYFGSIDEIYLNDDINKYTKVSGITLDIATRLTMDK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQLAVVG 114 + + + I D ++YP L DYP LF G L + +++VG Sbjct: 61 DLNKFNRLIDKMYNEGINYITMDDKYYPYSLKEIYDYPPILFYRGKNLFVEENPMISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + R F + +G+ + SG+A GID AHK ALQ G +IAVLG+G++ I Sbjct: 121 TRKASNYGIQVARDFAREFSNKGLDVVSGMAAGIDTYAHKGALQGFGDTIAVLGSGVDKI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ +A+L ++E+ G ++SE+ PL+++FP RNRIISGLS G +V+EA+ +SGSL Sbjct: 181 YPKSNAKLYDEIIER-GMVISEYFPGTEPLSHHFPARNRIISGLSHGTIVIEASYKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQGREV+++PG I + EG + L+K GA L+ ++LE+L + L Sbjct: 240 ITARYANEQGREVYSVPGNITSALCEGSNSLLKDGAKLILSANDVLEDLYYVLDRPNMER 299 Query: 295 ENSFYSPDQQ----------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + +++ + + D D++ E G + + Sbjct: 300 ITDIIEAKEDRSFRQIKKEVNILDKYELSDDERNICQAILDGNNTADLINENLGLEINLI 359 Query: 339 VTQLLELELAGWIAAVPGG 357 + L LE+ G + + Sbjct: 360 NSVLTMLEIRGIVISTGAN 378 >UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSK6_9FIRM Length = 366 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 131/367 (35%), Positives = 192/367 (52%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + + I L + + + + Q LT + Q Sbjct: 1 MGQEKYEVWFAGIRGLGARKKYLLHEALKSCRNAYYIEETQLKKFPFLTEKDGQEIRQAQ 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 RK E +++ +IP SE YPP+LL D+P ALFV+G+L + + A++G+ Sbjct: 61 KRKDPEKICEEMKKKGIRIIPYYSEKYPPKLLQLADFPFALFVKGKLPGKDTEKAAIIGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YGE++ + LA GV + SGLARGIDG+ H+ AL G + AVLG G++ + Sbjct: 121 RNCTAYGEKYAVEYGRKLAQAGVDVISGLARGIDGMGHRGALMEKGKTFAVLGCGVDICY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L +LEQGG ++SEFP PPLA NFP RNRIISGLS +L++EA RSGSL+ Sbjct: 181 PREHIGLYMDILEQGGGILSEFPPGTPPLAVNFPLRNRIISGLSDVILIMEARERSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG+EV+ALPGP+ +P S G + LI+QGA ++ E +L L E Sbjct: 241 TADLALEQGKEVYALPGPVDSPLSTGCNRLIQQGAGVLLSAENLLNEWGIMPDNLCRKTE 300 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +++ + + + VG V+ + G + +++ L+ LEL G+I V Sbjct: 301 IK-PDKNKKTLESEDELVYSCVGLYPKNVEHLVLETGLEIRKLMRVLVSLELQGYIKEVS 359 Query: 356 GGYVRLR 362 Y R Sbjct: 360 KNYYIRR 366 >UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3PGY9_CELJU Length = 387 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 194/379 (51%), Gaps = 22/379 (5%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIESSL- 64 L ++ + ++ + L + Q + R S+L Sbjct: 9 LLILRLPETGTVTYWKLVDHFGSPEAALNQPAPYLEAFLRPQALQALEEYRRHPANSALA 68 Query: 65 --------CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 P+ H +P + E YP L + P LFV G+ L QLA+VGSR Sbjct: 69 QKVAGDLEQLDANPDIHCLPLEHELYPELLRQIPNPPPLLFVRGDPGCLGLPQLAIVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R F LA RG TITSGLA GID AH+ AL+ +G ++AV+G G++ I+P Sbjct: 129 NPTRSGTDNARHFAAYLAERGFTITSGLALGIDAAAHRGALEASGKTVAVMGTGIDRIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA ++ QGGALVSEFPL A NFP+RNR+ISGLS G L+VEAA++SGSL+T Sbjct: 189 GRHRTLAQQIIAQGGALVSEFPLGTSSHAGNFPQRNRLISGLSLGSLIVEAAVQSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q REVFA+PG I NP + G H LI+QGA LV ++I+E L L + + Sbjct: 249 ASFALQQNREVFAIPGSIHNPLARGCHQLIRQGAKLVETGDDIVEELDGLLGFHRQQLQR 308 Query: 297 SFYSPDQQ-----------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 S Q ++ +LL +G + +D + ER + QL+ L Sbjct: 309 SAVKQVQPLPTASTNMPLAELDPAATQLLEAMGYDPVNIDTLVERTSLDAGIIAAQLVSL 368 Query: 346 ELAGWIAAVPGGYVRLRRA 364 EL+G I + GGY+R+ A Sbjct: 369 ELSGAICTIAGGYLRVPNA 387 >UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteobacteria RepID=Q15ZY0_PSEA6 Length = 379 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 159/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHW----VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 + WL L + + I VA + + L G T Q Q+ + Sbjct: 16 EQRQWLILAQLPRFSVAKLATILRKNAIQVADLFNANPKQLAAYGFTDGQIQQLQHPNER 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ SL W EQ + L+ S+ YP LL T P L+ G L++ Q+A+VGSR Sbjct: 76 RLDKSLQWSEQTSSSLLNITSKHYPKVLLQTARPPILLYCLGNKDLLNTHQIAIVGSRNP 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G++ + F + L+ G T+TSGLA GIDG+AH L+V G ++AVLG GLN I+P+R Sbjct: 136 SIAGKQNAQYFAQGLSQCGWTVTSGLALGIDGLAHDGVLKVQGNTVAVLGTGLNNIYPKR 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H ++A S+LEQGGALVSEF ++P NFPRRNRIISG+S G L++EAA++SGSL+TAR Sbjct: 196 HVKMADSILEQGGALVSEFVPEMPAKPENFPRRNRIISGMSLGTLIIEAAIKSGSLITAR 255 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQ R+VFA+PG I N S+G H+LIKQGA LV +I + Q + ++ Sbjct: 256 YALEQNRDVFAVPGNINNVLSKGCHYLIKQGAKLVECVGDINDEYQHLALNFLNIQQSEL 315 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +Q +A +LL +V E TP+D+V ER G PV EV++QLLE EL G +AAVPGGY Sbjct: 316 QKSARQSLAS--DKLLDSVDFETTPLDIVVERCGMPVAEVMSQLLEYELRGLVAAVPGGY 373 Query: 359 VRL 361 ++L Sbjct: 374 LKL 376 >UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI82_DESAH Length = 372 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 112/370 (30%), Positives = 183/370 (49%), Gaps = 9/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-----FP 56 + W + SI + R+ + +I A + +Q+ ++ Sbjct: 5 DNYLPWFIVKSIPGIGNHLYKRLINRFKTPENILAAKAAELKTIRGMSQKAITGIVHCTV 64 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K E +L + + ++ + YPP L D P +GEL+A +++VGSR Sbjct: 65 KKKAEIALATVLRGKIRVVTMNDPTYPPLLREIADPPPFFTFQGELNA-DLPCISIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG LA G + SG+ARGID AH AL G ++A+LG+GLN I+P Sbjct: 124 NATAYGLESAYRLGYDLAVLGFQVVSGMARGIDTAAHHGALAAKGKTMAILGSGLNWIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF D P NFP RNR+I+G+S G +VVEAA +SGSL+T Sbjct: 184 RENQSLFQAIC-QTGVVISEFSPDTRPEPRNFPIRNRLIAGISTGTIVVEAANKSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-- 294 AR A + REVFA+PG I + S G H LI+ GA LV ++++ L +H P P Sbjct: 243 ARLAADFSREVFAVPGSINSHRSHGTHALIRAGATLVETHRDVIQELHHMVHTEPLDPLT 302 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + +++++ ++ + +D + E+ + + LL+LEL G + + Sbjct: 303 KPRGKNENKKELTRVELAIVTILEPYPLHIDKIVEKTDLDIASISAALLDLELKGMVRQL 362 Query: 355 PGGYVRLRRA 364 PG ++ Sbjct: 363 PGKLFSIKEE 372 >UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia RepID=A4XIW6_CALS8 Length = 380 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 9/362 (2%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHID--AVVLQQTGLTLRQAQRFLSFP 56 M D WL L +I + +I + G + Q Sbjct: 18 MSDERKLYWLWLYTIKGIGPKKFRQIKQEFGSLENAYLNRKEFNLEGFSSSIKQLIRDSD 77 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGS 115 K E L + + + ++I D FYP +L P +F +G ++ L + ++++VG+ Sbjct: 78 LKEAEKVLEFCIKNSINIILEDDVFYPTELKNFDHSPVIIFAKGNVNVLKAQYKISMVGT 137 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++YG+R + +A + + + SG+ARGID H AL+ NG +IAVLG G++ ++ Sbjct: 138 REPTYYGKRVAKDLAGLVAQQNIVVVSGMARGIDTFCHMGALE-NGTTIAVLGCGVDIVY 196 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + +L ++E+ G ++SEF P NFP+RNRI++ LS ++V+EAA +SG+ Sbjct: 197 PKENYKLYNQIVEK-GCVISEFLPKTLPDRMNFPQRNRIVAMLSPCLVVIEAAEKSGTFS 255 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 T ALE G+EVFA+PG I + S G + LIK+GA +V ++ LE+L+ + P Sbjct: 256 TVDFALEMGKEVFAVPGNIFSQKSSGTNRLIKEGARIVCSYQDFLEDLREIYNLFPKQIS 315 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + +LL +VG+ ++ + +V + + LE+ G + Sbjct: 316 LFDVEEELSEEEYTILKLLDSVGEA--HIENLILLTNWSAGKVASVITSLEIKGKVVRER 373 Query: 356 GG 357 G Sbjct: 374 GN 375 >UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFB1_BREBN Length = 356 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 180/357 (50%), Gaps = 7/357 (1%) Query: 12 SISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS-IESSLCWL 67 IS L + I + ++ GLT + ++ + L Sbjct: 1 MISGLGRKKIREIFEITGSFQIAIENWHELARELGLTSLITGQVDQQSNEAPAMALLEKR 60 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E+ + + YP L D+P LF G+ L + VVGSR + YG Sbjct: 61 EEEGTRFLCPFDDAYPASLRNIPDFPWTLFYRGDHTLLDKLSIGVVGSRKPTPYGRASCS 120 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L G+ I SG+A GID AH+A L+V G +I VLG G+ ++P RH L + Sbjct: 121 FFVRELVQAGLVIVSGVAYGIDAEAHQATLKVGGKTIGVLGCGMKHVYPSRHRELYRQI- 179 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 E G L+SE+P +PP++ FP RNRIISGLS GVLVVEAA +SGSL+TA CALEQG+EV Sbjct: 180 ESFGLLLSEYPPHIPPISGLFPERNRIISGLSIGVLVVEAAEKSGSLITADCALEQGKEV 239 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE-NSFYSPDQQDV 306 FA+PGPI + S GPH LIKQGA LVT +I + ++ L + + D + Sbjct: 240 FAIPGPIFSLMSAGPHNLIKQGAKLVTCSNDIWDEIKHHLPEAKQMQQVKKSNATDVIPL 299 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL-LELELAGWIAAVPGGYVRLR 362 + ++ V + +D + + +++ QL + LE G I A+PGGY R Sbjct: 300 SNEEKAIVEAVTYDGIHLDELMSCLEKDQRKMLHQLVIRLEAKGAILALPGGYFARR 356 >UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCA2_PLALI Length = 368 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 139/365 (38%), Positives = 198/365 (54%), Gaps = 7/365 (1%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LS 54 M D + L+LM I + R+ + + + L+Q GL+ A R L Sbjct: 1 MTDAALVDALQLMLIPKIGPATYERLIQHLGSPTAVLEASAAVLEQAGLSSTLASRVSLG 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R +L E N + + YP +L P LF++G + A +A+VG Sbjct: 61 RDRAEARQTLQQCEALNIRATCLNRDDYPVRLKEIDRPPPVLFIQGSVTAADQLSVAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR+ S YGE+ + F LA GVTI SGLARG+DG+AH+AAL+ G ++AVLG G+N + Sbjct: 121 SRSPSVYGEQMAKNFAGGLARAGVTIVSGLARGVDGLAHRAALEAGGRTLAVLGGGINQL 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR H LA ++EQ GAL+SE+ DVP +A FP+RNRIISGLS LV+EA+ +SGSL Sbjct: 181 YPREHIELARQVVEQ-GALISEYAPDVPAIAPQFPQRNRIISGLSLATLVIEASEKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 TAR A+EQ R+V A+PG + + S+G LI+ GAILV E++LE L + Sbjct: 240 HTARHAMEQHRDVLAVPGRVDSDASKGCLKLIRDGAILVRHVEDVLEALGHLSAPVQKPG 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 P + + +LL VG E TPVD V + G ++ L LE+ + + Sbjct: 300 GQVVQQPRELLLNDQEQKLLQLVGIEATPVDTVLTQCGLEYSRALSTLTVLEIKKLVRRL 359 Query: 355 PGGYV 359 PG +V Sbjct: 360 PGNFV 364 >UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B4D957_9BACT Length = 362 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 185/364 (50%), Gaps = 10/364 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M TE + L + + + R+ + Q G+ A + Sbjct: 1 MNSTEASIALNMVPGVGPVRLRRLLEVFETPEQVLLAREGQLRAVDGIGAEVAAGIAHWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K + + L +++ +I S YP L ++ P L++ GEL + VVGS Sbjct: 61 EKVDLTAELARIQEFGARVITQQSPEYPRMLQEISNPPIVLYIWGELTERDQQAIGVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + LA G+T+ SGLARGID AH+ AL G ++AV+G+GL ++ Sbjct: 121 RKTSHYGLECAKKLSYQLAYAGLTVVSGLARGIDTAAHQGALAAQGRTVAVIGSGLMDLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + GA+VSEFP+ PP FP RNRI++G G LVVEA L+SG+L+ Sbjct: 181 PPENQALAEKITSS-GAVVSEFPMTFPPSTQTFPYRNRIVAGWGSGTLVVEAGLKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V+A+PG I P S G + LI+QGA LVT +IL++L+ L P Sbjct: 240 TATQALEHGRSVYAVPGQIDRPTSAGSNRLIQQGAKLVTGAADILDDLRI----LAPEPR 295 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +LA+V + TP+D++ ++G P+P+V + LL LE+ + +P Sbjct: 296 KMSTPVSAIPLSTEEQSILASVDNAETPIDLIVTKSGLPMPKVASTLLALEMKRLVKQLP 355 Query: 356 GGYV 359 G Sbjct: 356 GQQF 359 >UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8D6_9PLAN Length = 401 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 30/389 (7%) Query: 3 DTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP- 56 + +W +RL + + + + + G+ + Q+ S P Sbjct: 14 ENSLWEMRLAMLDGVGPRTRFNLVDRFGSAQEVFTASQHELRMVTGVGPKVVQQIQSPPA 73 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +E L ++P E YPP L+ D PG L+ +G L A +A+VG+R Sbjct: 74 WQEVEKLLDECTSLGIEVVPLADERYPPSLVNLPDPPGVLYQQGALQASDRQAIAIVGTR 133 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + F L+ G TI SGLARGID AH+ AL G +IAVLG+GL I+P Sbjct: 134 HATPYGLAQAKHFAYALSRAGYTIVSGLARGIDAAAHRGALDAGGRTIAVLGSGLACIYP 193 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + E+ GAL+SE P PP ++FP+RNRI++GLS GV+VVEAA RSG+L++ Sbjct: 194 PEHLDLAKEIAEK-GALLSEQPPHSPPTRFSFPQRNRIVTGLSIGVVVVEAAERSGALIS 252 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE- 295 R A EQGREVFA+PG I + S+G H LI++GA L+ E +LE L+ P Sbjct: 253 GRLAAEQGREVFAIPGRIDSRMSKGCHQLIREGAALIESVEHVLEQLESLGRDDLVPPSR 312 Query: 296 ----------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 +P D++ +++ + E +D V R+ Sbjct: 313 VRGANAKQRSLPSDSSSDSAAAPPKLAPIPADLSAEERKIVELLSAEPMLIDQVTVRSKL 372 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLR 362 P+ V++ L LE+ I+ V G V R Sbjct: 373 PISRVLSTLSVLEMKRLISRVGGNQVMRR 401 >UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIS6_9BACT Length = 375 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 135/380 (35%), Positives = 191/380 (50%), Gaps = 18/380 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E WL L S+ L + + + + + ++ R + Sbjct: 1 MEVLEAWLSLRSVKGLSDGTICTLVRHFGGPKEVLSASSSELRHVAGLRASVMTSLRNAP 60 Query: 61 E--------SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + + +E+ ++ YP +L D P L+V G L +A+ Sbjct: 61 DPSVVAHVRKEMRLIEKGASSIVTILDAAYPRRLAMIPDPPPVLYVRGTLPPADDHAVAI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR + G + F ++LA G TI SGLARG+D AH+ AL +IAV+G G++ Sbjct: 121 VGSRKATPAGALMTQEFSQSLAAMGFTIVSGLARGVDAAAHRGALTAKARTIAVVGCGVD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P H +L + E GA+VSE PL PPL Y+FPRRNRIISGLS GV+V EA +SG Sbjct: 181 RTYPPEHRQLRKDI-EVNGAVVSELPLGSPPLPYHFPRRNRIISGLSLGVIVSEANQKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-WLP 291 +L+TAR ALEQ REVFA+PG + N +G H LIKQGA LV E +++E L L Sbjct: 240 ALITARYALEQNREVFAIPGAVKNGKHQGAHSLIKQGAKLVEEAGDVVEELLLQLDGPFR 299 Query: 292 DAPENSFYSPDQQDV-ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 D +N+ + V +LA V DE +D V +A EV++ LL LEL G Sbjct: 300 DRVKNAGFQETAVPVFTAKEQRVLALVHDEPVSIDEVLTQAPFDRAEVMSLLLSLELRGC 359 Query: 351 IAAVPGGYVRLRRACHVRRT 370 I VPG +C++R + Sbjct: 360 IQQVPG-------SCYIRSS 372 >UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQW9_HAHCH Length = 389 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 150/382 (39%), Positives = 200/382 (52%), Gaps = 26/382 (6%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR--------- 57 WL L +I SL + +A + S ID L + ++ + + + Sbjct: 9 WLNLTTIPSLGDSRLALLAQHFEESSQIDDFQLGVSSSLSFSSELWRAIEKVIAHGDRPV 68 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++L W EQP + L YP L D P L+ G +H Q+A+VGSR Sbjct: 69 NAQAANALRWSEQPGNRLFLLPDADYPSLLRLLPDPPAVLYARGRHELIHQPQIAMVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S +G+ R F +L G TITSGLA GIDG AH AL G +I VLG+GLN I+P Sbjct: 129 NPSVHGQETARQFARSLGESGFTITSGLAAGIDGSAHAGALGTLGATIGVLGSGLNVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H LA ++E G LVSEFP D P + +FP+RNRIISGLS G LVVEA+LRSGSL+T Sbjct: 189 AKHRDLAQKMMES-GLLVSEFPPDTQPRSQHFPKRNRIISGLSLGTLVVEASLRSGSLIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ REVFA+PG I NP + G H LIKQGA LV ++IL L + E Sbjct: 248 ARNALEQHREVFAIPGSIHNPQARGCHHLIKQGAKLVECTDDILAELPALMGLYRSLNEP 307 Query: 297 ---------------SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ +L +G + TP D + ER G + E+ + Sbjct: 308 WTTVFAAEEFPGQQSQPEPASLRPLSEQAEAVLKGMGYDCTPPDALVERTGLSIAEIRSV 367 Query: 342 LLELELAGWIAAVPGGYVRLRR 363 L+ELEL GW+ V GG++R R Sbjct: 368 LIELELEGWVQEVAGGFIRNAR 389 >UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWB1_9DELT Length = 381 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 122/373 (32%), Positives = 177/373 (47%), Gaps = 15/373 (4%) Query: 2 VDTEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--LQQTGLTLRQAQRFLS--F 55 + EIW L L SL +I + A + GL + Sbjct: 6 REDEIWACLALSKTRSLGCKTWQKILEVFRSPAQALANSSHWAEMGLVSSSQAGIFNSGQ 65 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + ++ ++ YP L P L+ G++ S LAVVGS Sbjct: 66 WKSEAQREFERIQSGQEQVLIWSDSEYPEHLRHIAGPPVLLYYLGDISLAKSPSLAVVGS 125 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG C L+ +G+TI SG A GID AH+AAL G ++AVLG G++ I+ Sbjct: 126 RNSSAYGREMTSKICRELSEKGITIVSGFAEGIDREAHRAALSAPGSTVAVLGTGIDLIY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L + + G ++SEFP P A+NFP RNRIISGLS GVLV++A ++SGS++ Sbjct: 186 PAINQDLWTHIRDH-GLILSEFPRGTRPDAHNFPYRNRIISGLSLGVLVMQAEIKSGSML 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA AL+ REVFALPG + PG G + LI+QGAILV ++ILE LQ GL Sbjct: 245 TAGYALDHNREVFALPGQVNLPGFSGCNQLIRQGAILVRTAQDILEALQLGLKNHLQQEN 304 Query: 296 NSFYSPDQQ-------DVALPFPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 ++ S D+ + + E T +D +++ + L+ LE+ Sbjct: 305 DNEMSAPVPAEPALPGDLTSEEKAVAGELINRERTHIDDLSQCLDLSPSSISRILVNLEI 364 Query: 348 AGWIAAVPGGYVR 360 G + PG Y + Sbjct: 365 RGMVRREPGMYYK 377 >UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B2A332_NATTJ Length = 349 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 120/355 (33%), Positives = 193/355 (54%), Gaps = 17/355 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFL-SFPRKSIESSL 64 L I L + + ++ W + L+ +G++ A+ + + ++ + Sbjct: 3 LKLIPGLGNNRIKKLIQWFGCGEEVWNSSIENLLEVSGISYDLAENIVVHRSKIDLQKKV 62 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + + +I E YP L D P L+ +G++ L++ +LAVVG+R + YG+ Sbjct: 63 NEIMEQGIKIILP--EEYPESLQEIYDSPVLLYAKGDVSLLNTRKLAVVGTRKITSYGDI 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + ++ +TI SGLA+G D AH LQ G +IAVLGNGL+ I+P + L Sbjct: 121 VIKNIIPSVTRADITIVSGLAKGTDAKAHYRCLQEGGKTIAVLGNGLDIIYPPENRELYK 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + E+ G L+SE+P ++ P ++FP+RNRIISGLS+GVLV+EA +SG+++TA+ AL+Q Sbjct: 181 QISEK-GLLISEYPPELGPQKFHFPQRNRIISGLSEGVLVIEAPKKSGAMITAQLALDQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G + LI QGA +VT+P++IL ++ L + +N Sbjct: 240 REVFAIPGNINNPCSQGCNALIAQGAKVVTDPDDILTEYNLTVNMLIEESKN-------- 291 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ +L + +D + ++ T LLELEL GWI GGYV Sbjct: 292 RLSSSQKAILEKIPYYEISIDELLSSTNTD-KDIYTCLLELELNGWIMRRLGGYV 345 >UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5F1_EUBE2 Length = 379 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 106/378 (28%), Positives = 172/378 (45%), Gaps = 17/378 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + W + +I+ + + + + I + G+ + + Sbjct: 1 MKEDYYWYWVNNIAGISNMKLRTLFNAFDTPEQIYKASDKLLNSVSGIKEKDVSAIIESR 60 Query: 57 RKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I LE+ YP QL+ DYP L+ +G L + +A+VG+ Sbjct: 61 NNEYIYRGYNDLERMKIKFTYPGKNDYPEQLMNIYDYPYILYYKGRLPQANVPAIAIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + + A G+ + SG+A GID A + A+ G S+AVLG G++ + Sbjct: 121 RNCTEYGRTIADMLAKCFADMGIQVISGMALGIDAAAQRGAVNKGGYSLAVLGCGVDVCY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + L L GG ++SE+P PP A FP RNRIISG++ ++VVEA +SGSL+ Sbjct: 181 PRSNIDLYTQLQNAGG-IMSEYPPGTPPRAGQFPMRNRIISGIADALIVVEARQKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQ R+V+ +PG IG+ SEG LIK+GA ++T P ++ + + + Sbjct: 240 TADQALEQNRDVYVVPGRIGDSLSEGCLKLIKEGAQMITSPMDVCATESINRYLNKNIKQ 299 Query: 296 NSFYSP-----------DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 F + + +A P + + + ++ + + + E LLE Sbjct: 300 CDFPNDLNDAGIFEGNLKKSGLASPKNMVYSQINLFPVSLETIVNNSRISLVEAEGILLE 359 Query: 345 LELAGWIAAVPGGYVRLR 362 LEL G I V Y + Sbjct: 360 LELDGLIEEVSKNYYIRK 377 >UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 Length = 371 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 163/371 (43%), Positives = 209/371 (56%), Gaps = 9/371 (2%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIA--HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M D ++ WL L L + + A+ GL Q + Sbjct: 1 MKDQDLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQWLACGLKPEQLVFLTTQA 60 Query: 57 RKSIESSLCWLEQPNHHLI-PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K E L W N+ I YP L P LF+EG A+H +A+VGS Sbjct: 61 AKQAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S G + R F LA G+ +TSGLA GIDG AH ALQ G ++AVLG+GL ++ Sbjct: 121 RNASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P++H LA ++ Q GALVSEF PP A +FPRRNRIISGLS GV+VVEAA +SGSL+ Sbjct: 181 PKQHQGLAERIIAQ-GALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP- 294 TAR A EQGREVF +PG I N S+G + LI+QGA LV ++I + L+ L W Sbjct: 240 TARYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQV 299 Query: 295 --ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + +S Q D LPFPELLANVG E TP+D++A R PV +++ QLLELEL G + Sbjct: 300 PYQATLFSAVQSDEELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVV 359 Query: 353 AVPGGYVRLRR 363 AVPGGY+R R Sbjct: 360 AVPGGYIRKGR 370 >UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM03_9FIRM Length = 363 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 14/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M+D L L M + + ++ L + FL++ Sbjct: 1 MMDI-FAAALPGCPRLGAKHMRTLIEAFGTAEDVWKASDKEIVESHLLKGKTEASFLAYR 59 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E L + + + + YPP L T + P LF +G + + +A+VGS Sbjct: 60 KETEPEEIGEKLYRLQIRCVTWEDDLYPPLLQTTANPPAVLFYKGN-NPVFEKTVAIVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA GVT+ SG ARGID AH+ AL+ ++ L GL+ ++ Sbjct: 119 RKATPYGVQTAERIACGLAENGVTVISGGARGIDSAAHEGALRGESPTVVALACGLDHVY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L +++ GG ++SE+P PPL FP RNRII+G+S+G+LVVEAA RSG+L+ Sbjct: 179 PPENKNLFQKIIDNGGTIISEYPPGTPPLGRQFPARNRIIAGMSRGILVVEAAERSGALI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 T+ ALE+GR+VF++PG I S G + LI+ GAI T E+IL + + E Sbjct: 239 TSDFALEEGRDVFSVPGNIWLDSSRGTNHLIRSGAICCTSYEDILSEYGWNEKSISSKKE 298 Query: 296 NSFYSPDQQDVALPFPELLA-NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + L + E + + +++G V ++ LL L+L G+I Sbjct: 299 S------PEQLTLEEEVVYRFCCTGEEVTAEDILQQSGMSVMKITMLLLRLQLKGFIKET 352 Query: 355 PGGYV 359 G Sbjct: 353 GSGRF 357 >UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMW3_9PLAN Length = 407 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 122/362 (33%), Positives = 192/362 (53%), Gaps = 8/362 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRKSIESS 63 LRL +S + + + + A + + +G+ + +Q+ + I+ Sbjct: 48 LRLALVSGVGPRTSQVLLERFGTHAGVLAATRSELERVSGVGPKLSQKITTAGEIDIDRE 107 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ + YP L D P LF+ G++ + +A+VG+R S YG Sbjct: 108 ISLCVDFDVDIMALEDARYPHLLTEIPDPPSILFLRGDISPADAMSVAIVGTRHASSYGL 167 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 F LA G T+ SGLARGID AH+ AL+ G +IA L +GL +I+P H LA Sbjct: 168 AQAERFGYELAKAGFTVVSGLARGIDAAAHRGALRAGGRTIAFLASGLRSIYPPEHETLA 227 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + EQ GAL+SE P PL+ FP+RNR+I+G+S GV+VVEAA RSG+L++ARCA+EQ Sbjct: 228 DEVAEQ-GALLSESPPLAKPLSGAFPQRNRLITGMSLGVIVVEAATRSGALISARCAMEQ 286 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I N + G H L+K GA LV +++LE L + ++P + Sbjct: 287 GREVFAIPGRIDNANARGCHRLLKDGAKLVESIDDVLEELGPLTRPAKTEDGKTIHAPIE 346 Query: 304 QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + ++ + D T +D V R+G P+ V++ + LE+ + + G V ++ Sbjct: 347 LQLNEMETAIMQALADGQPTDMDSVVSRSGLPIQNVLSTICVLEMRRLVRRLSG--VSVQ 404 Query: 363 RA 364 RA Sbjct: 405 RA 406 >UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNG9_AKKM8 Length = 375 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 181/371 (48%), Gaps = 9/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFP 56 M E + L I L ++R+ A I + G+ + A R S+ Sbjct: 1 MTPREAAIALNLIPGLGPVRIMRLLQVFASPELILESPSSLLMEIPGVGAQLACRISSWR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVG 114 + L + + + YP L A D P L+ G +AVVG Sbjct: 61 STVNPYRELELADNAGAAVTTVFDDSYPSSLRALPDPPIVLYSWGNWTGTDAERSIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG R LA G+T+ SGLARG+D AH A+ G +IAV+G GLN + Sbjct: 121 SRMATHYGRLCARNISHDLAEAGITVISGLARGVDTEAHTGAMDAEGRTIAVIGAGLNKL 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA + + GA+VSEFP+D+PP FP RNRI+SG S+ LVVEA+ RSG+L Sbjct: 181 YPRENRNLAQRIADGHGAVVSEFPMDLPPSRTTFPMRNRIVSGWSRATLVVEASGRSGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP--- 291 +TAR A EQGR+VF +PGP+ S+G H LI+ GAIL T +IL+++ + + Sbjct: 241 ITARTAAEQGRDVFCIPGPVDRHSSDGCHALIRDGAILATGASDILQDMNWAVPEQGLPL 300 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 +P + + L E+L + +D + G+ + L ++++AG I Sbjct: 301 FSPCSPAGASTPPLPTLEEKEILHAIRLGFNTIDTLCTSLGKAAHTITPLLAKMQIAGQI 360 Query: 352 AAVPGGYVRLR 362 GGY + Sbjct: 361 TPDAGGYFSIN 371 >UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria RepID=Q5N3V3_SYNP6 Length = 406 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 16/369 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLS-FPR 57 ++ L L + L + R+ L+ G+ L A+ + + Sbjct: 31 ESLYCLALSHVPRLGPALLRRLLMHFGCFEAAWEAPTTALLEVDGIGLLLAEAIATVRQQ 90 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVV 113 E+ ++ N H + YP L P L+ G L + + VV Sbjct: 91 HQPEALWEQHQRQNPHFLLWTDPAYPRLLREIPTPPPVLYYRGNLDLIQPPLDAVAIGVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YG RW +A G T+ SGLA G+D AH+A L+ G ++AVLG G+N Sbjct: 151 GTRDPSPYGRRWTGKLSGAIAQAGYTVISGLAYGVDTEAHQACLEARGKTVAVLGTGVNV 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ L ++LEQGG ++SE P P +FP RNRII+GLS+ +LV EA RSG+ Sbjct: 211 IYPPQNRALYEAILEQGGLILSEQPSGTQPDRGSFPARNRIIAGLSRALLVTEAPGRSGA 270 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A E R+V+ LP + NP + G LI+QGA + +L+ L+ P + Sbjct: 271 LITAHLANEFCRDVYILPNSLDNPKAAGCLSLIQQGAQPILGSGHLLDWLRQLPPLDPQS 330 Query: 294 PENSFYSPDQQ-------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P + Q D++ ++ A + D+ D + E++G +V L LE Sbjct: 331 PPLMPSAVPSQEVEEAIADLSPEQAQVYALLSDQPISKDDIVEQSGLDFHQVQIHLTHLE 390 Query: 347 LAGWIAAVP 355 + G +P Sbjct: 391 ILGLAEVLP 399 >UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1NY90_9DELT Length = 381 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 127/368 (34%), Positives = 178/368 (48%), Gaps = 13/368 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLS-FPRKSIES 62 WL L+ L R+ + I A + GL A+ R + Sbjct: 12 WLTLLFTPGLGPVAAGRLLAGYGGMAAILAATAKDLQAHGLRPASAEALAQGSARPRAQQ 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + + H + D YP L +D P L+ GEL AL +AVVGSRA + YG Sbjct: 72 ELARIRRTGLHCLTLDDPAYPTLLREISDPPLVLYGRGELQALKRPAVAVVGSRAATTYG 131 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ LA G T+ SG A GID AH+ AL+ G + AVLG GL+ ++P ++ +L Sbjct: 132 KKIASRLGAELAAAGFTVLSGGALGIDSAAHQGALEAGGTTAAVLGCGLDVVYPPQNRQL 191 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ Q G L+ E+PL P A+ FP RNRIISGL+ G +VVEAA RSG+L+TA +LE Sbjct: 192 FHTIGRQRGLLLGEYPLGTQPEAFRFPARNRIISGLAVGCVVVEAARRSGALITAEMSLE 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN------ 296 GREV A+PG I SEG H LI++GA LV +E+L+ L P Sbjct: 252 HGREVMAVPGRIDTAKSEGCHRLIQEGAKLVHRFDELLQELLASPLTARFLPAKPATASS 311 Query: 297 ---SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 +P+ LLA + ++ + P P+V LLELE+ G + + Sbjct: 312 AAAPTTTPEATPANAEEQALLATLDGYPRDIEEIIAACRLPAPKVNALLLELEIRGLVES 371 Query: 354 VPGGYVRL 361 PG R Sbjct: 372 APGPQYRR 379 >UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria RepID=Q31J83_THICR Length = 377 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 140/373 (37%), Positives = 196/373 (52%), Gaps = 15/373 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPR 57 + WL L + + +I + S A L +Q +R Sbjct: 5 DNLHDWLLLHFA-RVNAKQLPQITSYFGSISQAMAASQASWQSSQLLKPKQLERLFDPDN 63 Query: 58 KSIESS-LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + S + W +QP ++ + YP L +D P L+V G++ L QLA+VGSR Sbjct: 64 DVLVSEAVAWSQQPEQTILTLEDAVYPELLKRISDPPILLYVRGDVSLLSEPQLAIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIAVLG 168 S G F + LA+ G+TITSGLA GID AH+ ALQ G ++AV+ Sbjct: 124 NASKQGRLTAMDFAQYLASVGLTITSGLASGIDKAAHEGALQAGASNSKTAQGTTLAVVA 183 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 GL+ ++P + LA + ++ GALVSE+PL P+A+ FP+RNRIISGLS G LVVEAA Sbjct: 184 TGLDRVYPAANRELARQIADR-GALVSEYPLGTKPMAHFFPQRNRIISGLSVGTLVVEAA 242 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 L+SGSL+TAR ALEQ REVFA+PG I NP ++G H LI+QGA LV ++ILE L L Sbjct: 243 LKSGSLITARTALEQDREVFAVPGSINNPQAKGCHQLIRQGAKLVESGQDILEELSVILQ 302 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + P S + +LL + E +D + + PV ++ +QL+ LEL Sbjct: 303 LSLNEPSKGQGSSPTKKDKEAPGDLLRYIEFEPIGLDELVVLSKLPVSDIQSQLMMLELE 362 Query: 349 GWIAAVPGGYVRL 361 G I A+ G R Sbjct: 363 GRIEALSAGRWRR 375 >UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETK3_AMOA5 Length = 374 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 172/373 (46%), Gaps = 14/373 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-----QQTGLTLRQAQRFL 53 M + E L L I + + RI I G+ L Q L Sbjct: 1 MHEQEKIYQLALSLIKGIGFNTWKRIIEKFKTAQAIFQASKTSLTGNLPGIPLSIIQAIL 60 Query: 54 SFPRKSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + SI E + ++ ++ E YP +L LF +G ++ S +++ Sbjct: 61 AKDTLSIAEKLVGAHQKNGIQVLSFFDESYPLRLKHIATPSSFLFCQGNMNFSMSKVISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VG+R + YG+ + F L + + SGLA GID AHK L+ ++ VL GL Sbjct: 121 VGTRKATPYGKSFVEKFIAGLREYEEILVVSGLAYGIDLQAHKMCLRYGLSTVGVLAGGL 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P H ++A +L GG LVSE P+ + FP+RNRII+GL+ +VVEA +S Sbjct: 181 DKIYPTAHKKVALDMLADGG-LVSEIPIGSTLETFQFPQRNRIIAGLADATVVVEADYKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 G+++TA A REVFA+PG I S G + LIK Q A L+T +++ + + Sbjct: 240 GAIITANFANAYNREVFAVPGNIDATYSAGCNHLIKTQQAHLLTSTDDLAYIMNWQKCSQ 299 Query: 291 PDAPENSFYSP--DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 P+ NS V ++L + E +D ++++ +V + LL+LEL Sbjct: 300 PNNLINSHKEKLVGLSQVEQEIVQVLKLLQKEA-YIDEISQQIQLSPSQVSSMLLQLELK 358 Query: 349 GWIAAVPGGYVRL 361 + +PG +L Sbjct: 359 NIVECLPGNKFKL 371 >UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia RepID=C7GBX1_9FIRM Length = 361 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 100/367 (27%), Positives = 182/367 (49%), Gaps = 12/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M++ W L +I + R+ + + +Q G+ + A + Sbjct: 1 MINYAYW--LSNIPGIGIRTRNRLIGAAGSAREVYGLTEKQLLLIPGVEEKHAAGIMESK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVGS 115 ++ ++ + + + + + +P +L A D P +L+V+G + ++ +A+VG+ Sbjct: 59 KRDYDTEYESMAEREIFFLSREEQLFPQRLAAIPDAPYSLYVKGTIPQEWNNKTVAIVGA 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA + SG+A G+DG H AL+ NG + AVLG G++ + Sbjct: 119 RRCSAYGRSVAEKIAGRLAASDAWVVSGMASGVDGSGHTGALRKNGYTCAVLGCGVDICY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ ++R+ +LE+ GA++SE+P P A FP RNRII+GL+ V++VEA ++SGSL+ Sbjct: 179 PKSNSRIYQEILEKNGAIISEYPPGTNPSAPLFPARNRIIAGLADVVVIVEAKIKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG++++A+PG + + SEG + LI+QGA ++++ +E L+ L+ Sbjct: 239 TADYALEQGKDIYAVPGRMYDALSEGCNNLIRQGAGIISDVDEFLKELELQGEINTGEDN 298 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + + + V + ++ G VPE++ L L G+I Sbjct: 299 LKNLL-----LEKDERLVYSCLSLRPKNVGELLQKTGMSVPEMMDILARLLQKGFITETV 353 Query: 356 GGYVRLR 362 Y + Sbjct: 354 KNYYIRK 360 >UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKQ7_9GAMM Length = 377 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 132/361 (36%), Positives = 198/361 (54%), Gaps = 8/361 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSIES 62 WL L++ L ++ + A + G+ L + + ++ Sbjct: 13 AWLELINTPGLGHQRLLHLVEAFGGPGAALAASPSEWRHHGVELNIDPAARTAAADADQA 72 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L E+ HHL+ D YPP L D P L++ G+ LH Q+A++G+R + G Sbjct: 73 WLDQDER--HHLLCRDDPDYPPLLAEIPDPPPVLYLNGDPSLLHRPQIAIIGARECTPQG 130 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNTIHPRRHAR 181 ER F LA GV +TSGLARGIDGVAH+ AL G +IAV+ G + I+P +H R Sbjct: 131 ERLAGEFARELAGAGVVVTSGLARGIDGVAHEGALAAPGGRTIAVVATGPDRIYPAQHRR 190 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + + G +VS +P PLA NFP+RNR+ISG++ G +VVEAAL+SGSL+TAR A Sbjct: 191 LAHRIADH-GLVVSLWPTGTRPLARNFPQRNRVISGMALGTVVVEAALKSGSLITARLAA 249 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGR+V+A+PG + +P S G H LI+ GA LV +E+LE+L L P ++ P Sbjct: 250 EQGRQVYAVPGSVLSPVSRGCHRLIRDGAQLVESADEVLEDLADWLGVAPGETASTPPEP 309 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP-GGYVR 360 ++ + +L +G + P++ + +R + + + L+ LEL G +AA+ G Y R Sbjct: 310 AREPLDPEQERVLNAMGFDPIPLETLRDRTKLTIERLSSMLVLLELNGRVAALDHGRYQR 369 Query: 361 L 361 L Sbjct: 370 L 370 >UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7MYI3_PHOLL Length = 361 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 180/362 (49%), Positives = 226/362 (62%), Gaps = 1/362 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+WLR+ IS L + +A + VL+ +GL+ Q +F + + Sbjct: 1 MEAMEVWLRMKMISHLATERAANVAEKLLYSGSRYLTVLKDSGLSPEQCLQFTKVNKTLL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 S L WLEQP HHL+ YPP L P LFV G+ L Q+A+VGSR S+ Sbjct: 61 ASCLKWLEQPEHHLLTYSHPSYPPLLKQIHTPPLVLFVAGKPDILLKKQVAMVGSRTASY 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGR+F L + I SGLA GIDG+ H+AAL G ++AVLG+GL I+P RH Sbjct: 121 YGERWGRIFASELVGYELVIASGLAIGIDGICHRAALDSGGKTVAVLGSGLGQIYPHRHG 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSEF D PP A NFPRRNRIISGLS V+VVEA SGSL+TARCA Sbjct: 181 LLAKQI-EENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEAGQNSGSLITARCA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPG +GN SEG HWLIKQGA L T +I+E++ L WL Sbjct: 240 LEQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATNAMDIVEHVYSSLQWLNMERTEEEVK 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 P + LPF ++L NVG EVTPVD++A+R+ P+ EV+T+LLELEL G + V GGYVR Sbjct: 300 PQFEQTELPFTDVLVNVGAEVTPVDIIAQRSSLPITEVMTKLLELELLGKVTVVAGGYVR 359 Query: 361 LR 362 + Sbjct: 360 VN 361 >UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXR7_9CLOT Length = 364 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 97/363 (26%), Positives = 172/363 (47%), Gaps = 10/363 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK--- 58 W+ L ++ ++ +I ++ G+ + A + + Sbjct: 4 YWIWLSETPNIGDVIGKKLLEEFKTPKNIFDADKEELMNVEGIGEKTANLIFNSKYEVMN 63 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E+ + E+ N L+ + YPP++ D P L+ G + + +VGSR Sbjct: 64 RSETIMKKCEKNNIKLLNINDSSYPPKVKNIQDSPILLYYLGTITKDC-MGVGIVGSRRC 122 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG++ + E LA +++ SG+A+GIDG +H A + G +IA LG G++ ++P+ Sbjct: 123 TSYGKKIAKEAAEFLAENNISVISGMAKGIDGYSHTACINSGGYTIAFLGGGVDKVYPKE 182 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H +L ++ + GA++SE+P P NFP+RNR+IS S +LVVEA SGSL+TA+ Sbjct: 183 HIKLMEEIIAK-GAVISEYPPGTKPYPKNFPKRNRLISAFSNKLLVVEAGEDSGSLITAQ 241 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A + REVFA+P I + S G + LI GA L +++L++ + ++ Sbjct: 242 FAKKYNREVFAVPNNIFSKESRGCNKLILNGATLYIFQQQLLDSYS-NITSKNKYCISNV 300 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + V +L + E ++ + +V+ +L +EL G I A G + Sbjct: 301 QVKNNLKVDYIEKIILNAINKEPKTIEQLQVIVNDDKVDVLEKLSLMELDGKIKAFQGKF 360 Query: 359 VRL 361 L Sbjct: 361 YSL 363 >UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 Length = 398 Score = 352 bits (905), Expect = 8e-96, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 173/395 (43%), Gaps = 36/395 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFPRK 58 + WL + + + R+A + + G + ++ + Sbjct: 5 EQAYWLAWSQVKGVGPVLLKRLAQHFELLENAWKARPIALGEVEGFGHKMIEKIIGQRNN 64 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVV 113 + L +Q N + D YP L P L+ G L S + +V Sbjct: 65 LNPFQFLEEHQQKNPQFLTPDDPDYPRLLWEIPSPPPVLYYLGRLDHRESQGQIPGVGIV 124 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G RW R + L G TI SGLA GID AH + L+VNG +IAVLG GL+ Sbjct: 125 GTRYPTDHGSRWTRKISQALVKSGFTIVSGLAAGIDADAHSSCLRVNGRTIAVLGTGLDL 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ +L + + G ++SE+P+ P NFP RNRII+GLS+ VLV+EA +SG+ Sbjct: 185 IYPPQNRQLFEQIAAE-GLILSEYPVGSKPERGNFPARNRIIAGLSRAVLVMEAPPKSGA 243 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ A E R+VF+LP + G LI GA ++ ++L +L Sbjct: 244 LITAKYANEFNRDVFSLPNSPDVQEAHGCLNLIHNGAEVILSENQLLASLGAIPLLDQGQ 303 Query: 294 PE--------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 + + +D+ ++LA V +E T +D + Sbjct: 304 EQKILPGDRQIGYLDQTNVPTLTTGARGKQPLTEPPEDLEPTLKKILAAVQEEPTALDQI 363 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +V LL+LE+ G ++ PG + R Sbjct: 364 VAVTALAIGDVSAGLLQLEILGLVSQEPGMRYQRR 398 >UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacteria RepID=C7RIS8_9PROT Length = 363 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 137/367 (37%), Positives = 187/367 (50%), Gaps = 14/367 (3%) Query: 1 MVDTEI---WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSF 55 M E WLRL + + G+ ++ I G + R A+ L Sbjct: 1 MDAAESSAGWLRLTLVPGVGGESQRKLLKAFGLPEAIFTAGRSALGDVIGDRTARLLLDT 60 Query: 56 PRKSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ + +L W N HL+ YP LL D P L+V G L L+ LAVVG Sbjct: 61 DNRAAVDRALAWANGTNQHLVCLADPEYPQALLQIPDPPTLLYVRGRLSLLNQPALAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G F A G+ + SGLA GID AH+ AL G +IA +G G++ I Sbjct: 121 SRNPTPQGRGNAERFAAAFAEAGLGVVSGLALGIDAAAHRGALNATGNTIAFIGTGIDRI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +LA + + GA+ SEFPL PP A NFPRRNR+ISG+S+GVLVVEA SGSL Sbjct: 181 YPAANQQLAFDIAAR-GAIASEFPLATPPAAANFPRRNRLISGISRGVLVVEATTESGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQGREVFA+PG I +P S G H LIKQGA L +++E + + A Sbjct: 240 ITARLAAEQGREVFAIPGSIHSPQSRGCHRLIKQGAKLAEAVADVIEEIGW-------AS 292 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + A LL +G + +D + +R+G V LL LEL G +A + Sbjct: 293 APADRPASATADAAEAGSLLLAMGFDPCSLDELTQRSGLTADAVSVILLHLELDGQVACL 352 Query: 355 PGGYVRL 361 PGG+ + Sbjct: 353 PGGHYQR 359 >UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYJ2_DESAS Length = 748 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 167/369 (45%), Gaps = 10/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSF 55 M+ E W+ L + + ++ I + G+ + ++ S Sbjct: 381 MMMEEYWIWLSQVKGIGPILQKKLLEKFGSPESIYLASGMELMTIAGINNKTVEKIQASR 440 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + L E+ N L+ YP Q+ + P + G L +S + +VG+ Sbjct: 441 SLEQARQILNRTEKQNIRLLTYHDYLYPVQVKGFSKAPVLFYYRGNLRP-NSTGVGIVGA 499 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG++ + LA + + + SG+A+GID AH A L+ G +IA+LG G++ + Sbjct: 500 RRCTDYGKQVTKEAATFLAKQDIPVISGMAKGIDSYAHTACLKAGGFTIAILGCGVDVCY 559 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H L + E+ G L+SE+P A +FP+RN I+ S +L+VEA +SG+L+ Sbjct: 560 PAEHRGLMDRIAEE-GVLLSEYPPQTRVRAEHFPQRNTWIAAWSNKLLIVEAGEKSGALI 618 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ A +Q R+V A+PG I + S G + LI +GA + P ++L + H Sbjct: 619 TAQLAEKQNRQVLAVPGQIYSQESIGCNQLIHKGAKIYLHPNQLLLDSGQKKHEQRINSN 678 Query: 296 NSFYSP---DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ E+ ++ V+ +A G ++ L +EL G I Sbjct: 679 EAHRNKRVNEIPPLSQIEKEIYDHLSPIPQSVEQLAGILGSNPSALLRILCVMELEGKIE 738 Query: 353 AVPGGYVRL 361 GG R Sbjct: 739 LFAGGMARR 747 >UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC300C Length = 360 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 108/364 (29%), Positives = 167/364 (45%), Gaps = 14/364 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP- 56 +D + W + ++ + + + + + + ++ LT + R +S Sbjct: 1 MDRKYWYWINNLEGIGNVKIRTLLS-LGTPEELYNMERKEFECLPVLTGKDIDRIVSKDI 59 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R++I + N + D E YP +L D P L+ +G L +A+VGSR Sbjct: 60 RQNIFEKYQKDMENNVRFVFPDEEDYPCRLKELYDKPYILYYKGRLPRNDVRSVAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R L+ G I SGLA GID AHK AL G + VL G+ +P Sbjct: 120 RCSEYGRYAAREIAGILSEAGACIISGLAAGIDSEAHKGALYKGGYTCGVLAGGVEKCYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + +GG ++SE+P + FP RNRIISGLS V+VVEA RSGSL+T Sbjct: 180 AGNFNLYMDIQNRGG-IISEYPGESITTPGMFPLRNRIISGLSDYVIVVEAGFRSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R V+A+PG I + S+G + LI GA++VT+ E + L + +N Sbjct: 239 AGTALEQNRTVYAVPGRITDVSSKGCNRLIADGAMVVTDFESLPGELGLSIPNYEKNIKN 298 Query: 297 SFYSPDQQDVALPFPELLA-NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +A L + + ++ + +G EV+ L LE+ G I + Sbjct: 299 DIV------LARDEKMLYSLLLDFTPKSLETLVNDSGMSPAEVLRSLTCLEIKGIIREIS 352 Query: 356 GGYV 359 + Sbjct: 353 KNFY 356 >UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJX5_9BACT Length = 380 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 171/371 (46%), Gaps = 15/371 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK-SIESSL 64 L + + ++ K +I ++ G+ R A+ L+ R L Sbjct: 11 LNMLPGVGPRTYNKLVKKFKKSENIFKASRKELLKCPGIGPRVAEEILNHERNYDPREEL 70 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYG 122 + +I YP L D P L++ G H L + +A+VG+R + YG Sbjct: 71 ERARLADIKIINRQDPLYPESLRNIYDAPIILYIRGNAHLLKNYDRNIAIVGTRRPTNYG 130 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + + TI SGLA GID AH A+Q+ +IA+LG G+ I+P+ + +L Sbjct: 131 LQMTEALATEASYASWTIISGLAVGIDSKAHHTAVQLKRPTIAILGGGIGKIYPKDNLKL 190 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + + GALVSE+P+ PP FP RNRII+ LS+ VLVVEA L SGSL+TA ALE Sbjct: 191 ARDICDH-GALVSEYPILFPPDRRTFPMRNRIIAALSRSVLVVEAGLNSGSLITANQALE 249 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 GR VFALPG + P S G H L+KQGAIL ++I E L + + Sbjct: 250 YGRSVFALPGRVDIPQSRGCHQLLKQGAILTESFKDIYEEFNLELGSNRKSAKKEQTEKQ 309 Query: 303 QQD-----VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + ++ + VD + E + V +V+ LL LE I +PG Sbjct: 310 ENREFDLQLDENERRIMEILKSGELHVDKICELSELNVGQVLATLLGLETHKLIRLLPGK 369 Query: 358 YVRL--RRACH 366 L RR Sbjct: 370 KYELTNRRQYE 380 >UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacteria RepID=D0KVS6_HALNC Length = 384 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 143/368 (38%), Positives = 199/368 (54%), Gaps = 10/368 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPRK 58 L L++I+ + + + A + GL A + Sbjct: 13 DARRALLFLITINGMGPKRLRCLLDAFDTPQAALAAPASEWIRLGLPASLANQHPRGMAD 72 Query: 59 SIESSLCWL-EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +E+ L WL E HHL+ A + YPPQL D P ALF +G++ L QLA+VG+R Sbjct: 73 RVETMLSWLDESEQHHLVLAGEKSYPPQLADLPDAPAALFGKGDIRLLGEPQLAIVGART 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R F L+ +G+ ITSGLA GID AH+ AL +G S+AV+G G + I+PR Sbjct: 133 PTSGGINNARAFARYLSAQGLVITSGLALGIDAAAHRGALAAHGASVAVMGTGPDIIYPR 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H LAA ++ QGG L+SE+P +FPRRNR+ISGLS+GVL+VEA+L+SGSL+TA Sbjct: 193 EHQALAAEIVAQGGLLISEWPPGTTARKEHFPRRNRLISGLSEGVLIVEASLKSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDAPEN 296 R A EQGREVFA+PG I NP S GPH LI++GA LV ++I E L L + Sbjct: 253 RLAAEQGREVFAIPGSIHNPLSRGPHRLIREGAKLVETAQDIFEELIDNLGARLRQTDDT 312 Query: 297 SFYSPDQQD-----VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S + P+ + ++L +G + D + +G EV + LL LELAG + Sbjct: 313 SLFEPESSPALAAHLDPEQQKILDCLGFDPQSADTLIASSGLTPAEVSSILLMLELAGHV 372 Query: 352 AAVPGGYV 359 +PGG Sbjct: 373 TTLPGGLY 380 >UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_HAEIN Length = 373 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 152/344 (44%), Positives = 200/344 (58%), Gaps = 12/344 (3%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPR 57 M D LRLM + L G + +I + + D V +Q G Q +R+ Sbjct: 1 MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEA 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K IE +L W ++ +HL+ S FYP L T +P LFV+G L AL Q+A+VGSR Sbjct: 61 KFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YGE W + F L+ G TITSGLA GIDG H+A + + G +IAVLG+GL I+P Sbjct: 121 CTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPS 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H RL+A ++E GALVSEF + P+A NFPRRNRIISGLS G LVVEA +SGSL+TA Sbjct: 181 KHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-------QFGLHWL 290 R ALEQ REVFA+PG I N S+G H LIKQGA+LV ++ILE L Q + + Sbjct: 241 RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD 300 Query: 291 PDAPENSFYSPDQQDV--ALPFPELLANVGDEVTPVDVVAERAG 332 A N PD + + A P+L + +G +D +AE Sbjct: 301 QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFN 344 >UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0N9B3_EUBSP Length = 365 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 127/365 (34%), Positives = 184/365 (50%), Gaps = 14/365 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP-RK 58 E WL SI L + + + + + L + + K Sbjct: 9 YEYWLA--SIKPLQPKKKRMLRENLGSGRTVYYIEETKLHFQEYLNAKDVETIRKAQGDK 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 IE L++ N IP S YP +L + P AL+V+G L S A+VG+R Sbjct: 67 KIEERWARLKEENIRFIPYFSREYPEKLKHIPNPPYALYVKGSLPKEDSPSAAIVGARRC 126 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YGE+ + E LA GV + SG+ARGIDG + AL G + +LG G++ +PR Sbjct: 127 TPYGEQMALAYGEKLAKAGVQVISGMARGIDGAGQRGALNGRGRTYGILGCGVDVCYPRE 186 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L L E GG L+SE PPL FP RNRIISGLS VL++EA RSGSL+TA Sbjct: 187 HIGLYMDLQENGG-LISEQIPGQPPLPAYFPERNRIISGLSDVVLIIEAKERSGSLITAD 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V+ALPGP+ +P S+G H LIKQGA ++ PE++L L+ + Sbjct: 246 MALEQGKDVYALPGPVTSPASQGCHRLIKQGAGILLSPEDLLMELEIS-----NMNPGQN 300 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +++ + P + + +G + + E G E++ +L+ LEL G+I V Y Sbjct: 301 SDENKKMLESPENMVYSCLGLFPKSIGQLLEETGLCPKELLERLITLELEGYIKEVSKNY 360 Query: 359 V-RLR 362 R+R Sbjct: 361 YIRIR 365 >UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiaceae RepID=B3QQG8_CHLP8 Length = 387 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 120/370 (32%), Positives = 183/370 (49%), Gaps = 15/370 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQ---------RFLS 54 L L + + + S + + G+ A+ + + Sbjct: 15 LMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRN 74 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + + E + + N ++ YP L D P ALFV G + AL + LAVVG Sbjct: 75 KAKLAAEEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVG 134 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ C L + G+TITSG+A GID AH A+Q GV+IAVLG G++TI Sbjct: 135 TRKATSYGKQATEHLCRDLVSMGLTITSGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTI 194 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + RL +LE GGA+V+E L P+ NFPRRNR+I+G++ G LVVE+ ++ GS+ Sbjct: 195 YTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTLGTLVVESDIKGGSM 254 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 +TA ALEQ REVFA+PG I S GP+ LI + A ++IL L +LP A Sbjct: 255 ITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPP-AAFLPTA 313 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 P + ++ + E +D++AE+ G P+ +++ L ELE+ + Sbjct: 314 GRQDVDKPSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQ 373 Query: 354 VPGGYVRLRR 363 PG +R Sbjct: 374 EPGQLFSIRP 383 >UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIM7_9CLOT Length = 366 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 133/365 (36%), Positives = 196/365 (53%), Gaps = 11/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLSF-PR 57 M + L L + M +I + + ++ LT Q + L Sbjct: 1 MDLDLLHLWLGMFPDITNMTMGKILAYFGGLQELWEAPDREIQGALTEIQGSKILELRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH--ALHSFQLAVVGS 115 K I + L++ N I ++P +LL D P L+ G + AL+ +AVVG+ Sbjct: 61 KKIIAYKNRLKERNITYIYPGHPYFPEELLNIPDCPRLLYARGRVEELALNRPGIAVVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGNGLNTI 174 R S YG+ R F LA+ I SGLA GIDG A +AA++ NG +IAVLG G+N Sbjct: 121 RKASAYGKEIARSFVSKLASYQTNIISGLAAGIDGTAQRAAVEIENGFTIAVLGCGINIC 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + L + E+ G ++SE+ LDV P + FP RNRIISGL+KGVLVVEA +SGSL Sbjct: 181 YPRENYDLYECI-ERSGVILSEYGLDVEPAKWRFPLRNRIISGLAKGVLVVEAQKKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREV+A+PG IG+ SEG + LI+QGA+LVT+ +I++ L Sbjct: 240 ITADQALEQGREVYAVPGRIGDRNSEGCNQLIRQGAMLVTDAADIIDELGLCKKEEIAQK 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ ++ + LP E+ A +G +V ++ + R QP V++ L ++E G+I Sbjct: 300 KDMVC---REQLDLPEQEIFACLGRDVVYIEDICSRVDQPPALVLSTLFDMEKKGYIRQ- 355 Query: 355 PGGYV 359 P Y Sbjct: 356 PMRYY 360 >UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYP6_SYNWW Length = 362 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 128/361 (35%), Positives = 186/361 (51%), Gaps = 8/361 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH-IDAVVLQQTGLTLRQAQR--FLSFPRK 58 + L +I + + +I + + + + L + + Sbjct: 4 TEKAALCFLHAIKGIGSKSLWKIKDSFGSFENCLKSDSSRLYALLKSEIAQAIISQRQNS 63 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 SI L LE + + + YP L + P L+ +G + + LAVVGSRA Sbjct: 64 SIFFYLERLENEGINPMGFEESAYPSSLRNIYNPPMLLYFQGNMDCVKKICLAVVGSRAA 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG R LATRG+++ SG+ARGID AH+ L G +IAVLG+GLN I+PR Sbjct: 124 SDYGRTTARKLGHQLATRGISVVSGMARGIDTEAHRGTLDARGKTIAVLGSGLNIIYPRS 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + RL ++EQ G ++SEFPLD P NFP RNRIISG+S+GV+VVEA ++SG+L+TA Sbjct: 184 NKRLFHEIIEQ-GVVISEFPLDTNPEPGNFPMRNRIISGISRGVVVVEARVKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGR+VFA+PGPI S G + LIKQGA L+T E+I+E + P Sbjct: 243 YALEQGRDVFAVPGPINRESSMGANNLIKQGAKLITGVEDIIEEYYDITIPEKELPLQE- 301 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + ++ + + D + G + E+ LL+LELAG + ++PG Y Sbjct: 302 ---QLLFLDEQEKVVVNCLAGDPLLFDDIIASTGFNIGELSRLLLKLELAGIVKSLPGNY 358 Query: 359 V 359 Sbjct: 359 Y 359 >UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNG7_CLOPH Length = 369 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 6/362 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LSFPR 57 + +W + + +V + + + ++ GL + Sbjct: 6 RNRLLWYWISKNEVIGHKTIVMLLYAFHSIEGVYQAKQEELLKLGLKEEVISYLNKKYSM 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + +E+ + ++ H I + + YP +L D P L+ GEL +AV+G+R Sbjct: 66 EELENEYNYTKKRGIHFICIEDKEYPEKLKKLYDAPWFLYYRGELPKDDLPSIAVIGARN 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG F + L+ G+ I SGLARG+DG+AH AL G + V+GNGL+ +PR Sbjct: 126 CSAYGSDAAYYFSKELSLFGIQIISGLARGVDGMAHSGALSCGGKTYGVIGNGLDLCYPR 185 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + GG ++SE+P+ L Y+FP RNRII+ LS G+LVVEA +SG+L+T Sbjct: 186 ENYGLYQEVNLHGG-ILSEYPIGSKALPYHFPLRNRIIAALSDGILVVEAREKSGTLITV 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 LEQG+++FALPG + + S+G + LI+ GA LV PE+IL L+ L Sbjct: 245 DSGLEQGKDIFALPGKLTDVLSKGCNLLIQSGAKLVLSPEDILVELRNQYSSLLGVTTRE 304 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S + + + + + E V+ + + +++ L ELE ++ + G Sbjct: 305 INSTKE-GLTEVEQLVYSFLSHEAIHVEELLMKTNLNQGQLLEVLFELESKQYVRMISGQ 363 Query: 358 YV 359 Sbjct: 364 QY 365 >UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteria RepID=B0C0E4_ACAM1 Length = 376 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 107/373 (28%), Positives = 172/373 (46%), Gaps = 15/373 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFP 56 M + WL I + + R+ S + TG+ + + Sbjct: 1 MEERPYWLAWSLIPGIGPVVLKRLQQRFGTLSSAWSADSGTLGAVTGIGAQTLKTIQKHR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLA 111 + + L Q N + YP L D P L+ G++ + + Sbjct: 61 QSTNPTDLLAQHIQKNPSFWCMADQAYPRMLTEIADSPPLLYYRGQVQLSENQGSTPMVG 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R S Y +RW R LA RG+T+ SG+A GID AH ++ G +IAVLG G+ Sbjct: 121 IVGTRDPSEYAKRWTRKIAYALAKRGITVVSGMAEGIDTQAHLGCIEGGGRTIAVLGTGV 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P R+ L + EQ G L+SE+P P +FPRRNRI++GL + +LV+EA +S Sbjct: 181 DMIYPPRNQGLYQKI-EQQGLLLSEYPSGTQPNRAHFPRRNRIVAGLCRALLVMEAPTKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF-----G 286 G+L+TA A E R+++ LPG + NP + G L+++GA L+ ++L+ L Sbjct: 240 GALITAYQANEYNRDIYVLPGSLDNPRAMGCLGLVQRGAQLILGIGQLLDQLGAMPPLSS 299 Query: 287 LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + S Q ++ +L GD P D++ + EV ++L+LE Sbjct: 300 APAPSISEIPSTLPSVQAEILKTVSQLCQQSGDGSVPFDLIVQSVELSAGEVSGEILQLE 359 Query: 347 LAGWIAAVPGGYV 359 L G + +PG Sbjct: 360 LQGLVNQLPGMRY 372 >UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibacteraceae RepID=C6VX12_DYAFD Length = 372 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 97/361 (26%), Positives = 162/361 (44%), Gaps = 9/361 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPR-KSIES 62 L LM + + ++ + S + +++ G+ + + L+ + E Sbjct: 13 LALMHTPGIGAVTIRQLISYCGSASQVFESDYRKLIKIPGIGDKIVKAILNKSTLEYAEK 72 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + ++ L+ YP +L D P AL+ +G + + +VG+R S YG Sbjct: 73 EVVQCQKTATQLLFFTDPDYPARLRPLYDAPIALYAKGNTNFNWPRTVGIVGTRKISEYG 132 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + L + SGLA G+D AH+ ++ N ++ V+ +G + I+P H R Sbjct: 133 KAVTEQIIRDLVPYQPLVVSGLAYGVDITAHRHCIRNNLATLGVMASGADVIYPAVHQRT 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 AA + GG +V+E L P FP RNRII+GLS +VVE+ GSL+T A Sbjct: 193 AADMQANGG-IVTENALGTKPDFMRFPARNRIIAGLSDVTIVVESGRTGGSLITVEFAQN 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 REVFA+PG I P SEG ++LI+ A + T ++ E L + P Sbjct: 252 YHREVFAVPGMINEPQSEGCNYLIRDNKAAIFTSVTDMAEALGWTAGMPESVPA-EAQPV 310 Query: 302 DQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++LA + T +D +A + G + + + LL LE G + ++PG Sbjct: 311 SFEGFTQDEGQVLALLKQHGPTQIDELAWQTGIHLNRLASLLLNLEFQGMVRSMPGKKYG 370 Query: 361 L 361 L Sbjct: 371 L 371 >UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH4_9CLOT Length = 396 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 119/396 (30%), Positives = 174/396 (43%), Gaps = 33/396 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M W+ L + RI + L + + Sbjct: 1 MNRELFWIWLSLGLTPGSRSCKRILERFRTPEEFFRAPDDQWRSFRLPAGELSALSTRDL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 E + LI + YP +L + P L+ +G L L LA VG+R Sbjct: 61 VQAEKISVACREKGIDLIAPGDQAYPNRLWEIPNPPALLYCQGVLPDLEEALCLAAVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G + C LA G I SG A G D A + ALQ G +IAVLG G + +P Sbjct: 121 SATEDGMKSAFELCYRLAGAGTVIVSGGALGADQAALEGALQAKGKTIAVLGGGADVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 A + +LE GGA++SE+P P NFP RNRIISGLS+GVLV+EA SG+L+T Sbjct: 181 PNFAGMRKRILENGGAVLSEYPPATKPYRGNFPVRNRIISGLSRGVLVIEAPKHSGALIT 240 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFALPG + + S G + LIK GA VT PE+ILE + + A ++ Sbjct: 241 AGLALEQNRDVFALPGSVRSEASFGTNQLIKDGAKPVTCPEDILEEYAYTYAYSGSAKKD 300 Query: 297 SFYSPD-----------------------------QQDVALPFPELLANVGDEVTPVDVV 327 S + +++++ +L + E +D++ Sbjct: 301 EIASTEIEGVSPSGQNPLRPPNHRTELPKAPPAIREEELSACAVKLYQAMSWEPAYLDIL 360 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 AE AG + + + ELEL+G I + G ++ Sbjct: 361 AEEAGLSAAQALQAVTELELSGIIQSYSGRRYAFQQ 396 >UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ81_ACIF5 Length = 365 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 139/363 (38%), Positives = 186/363 (51%), Gaps = 9/363 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTGLTLRQAQRFLSFPR 57 M D WL L I+ L + A LQ GL Q P Sbjct: 1 MTDR-AWLALGRIAGLGPIRQRALLERFGAVDRCFQTGAGALQGLGLQAAQIAALQKAPE 59 Query: 58 KSIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + WLE P+ L YPP L +D P L++ G+ L+ LA+VGSR Sbjct: 60 DVLTPADRRWLESPDTDLCRWTDSDYPPLLRHISDPPLLLYLRGQRACLNQAMLAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F L G+ I+SGLA GID AH+ AL ++AVLG G + I+P Sbjct: 120 SPTASGVATAEAFARNLGEAGLIISSGLALGIDAAAHRGALNSG--TVAVLGTGADLIYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +LA + Q G ++SE P D P + FPRRNRIISGLS GVLVVEAA SGSL+T Sbjct: 178 RSHLQLARQIAGQ-GLILSEQPPDTGPRSGLFPRRNRIISGLSLGVLVVEAAEGSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A++QGREVFA+PG I +P S GPH LI+ GA LV E++L L L +A Sbjct: 237 ARLAMDQGREVFAIPGSIHSPLSRGPHRLIRDGAKLVESAEDVLSELGPLYAVLRNAQAM 296 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + D Q + A + + + +A R G + E+ LL++EL G++AA PG Sbjct: 297 A-PAADWQPEDPAQARVWAAMDFDPLAPEQIANRCGLTLTELSAILLDMELQGYLAACPG 355 Query: 357 GYV 359 G Sbjct: 356 GRF 358 >UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVN1_CHLT3 Length = 386 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 16/369 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRF---------LS 54 L L I S+ + + + + + Q G + + ++ Sbjct: 17 LILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMA 76 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +E+ + L+ YP L P LFV G L S LAVVG Sbjct: 77 LAEAQAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVG 136 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ R C+ L +TI SGLA GID AH+AAL+ G ++AVL G++ I Sbjct: 137 TRQATDYGKKATRKLCQGLVANRMTIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + ++ +++E GAL+SE L A FP+RNRIISGLS G LVVE+ + G+L Sbjct: 197 YTDPKGKIYPAIIE-NGALLSEEWLGSEITAEKFPKRNRIISGLSLGTLVVESDYKGGAL 255 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA AL+Q REVFA+PG I + G + LI+ A LV E+IL LQ + Sbjct: 256 ITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLF 315 Query: 294 PENSFYS-PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 EN P Q+ ++ ++LA + +D + E++G V ++ L ELEL + Sbjct: 316 EENGHRPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVE 375 Query: 353 AVPGGYVRL 361 +PG + + Sbjct: 376 QLPGKFFKR 384 >UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELQ1_CHLPB Length = 382 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 121/367 (32%), Positives = 180/367 (49%), Gaps = 18/367 (4%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF---------L 53 L L + L + + + I + G+ + A+ L Sbjct: 16 LLVLSRVPGLGPARIRALKRQFGTSNAIFHADERALAVIPGIGRKLARTITDFFRSPRNL 75 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 RKS E L L++ N L+ D YPP L D P LFV G++ A HS L+VV Sbjct: 76 DLARKSAERQLALLDRYNATLVTIDEASYPPLLKEIYDPPPYLFVRGDIQAAHSPCLSVV 135 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + C L T+G TI SG A GID AHKA L G +IA+L G++ Sbjct: 136 GTRQATLYGRKAVEHICRGLVTKGFTIVSGFAYGIDMAAHKATLDNGGKTIAILAGGVDN 195 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 H ++ ++E+ GA++SE L+ FP+RNR+ISG+SKG ++VE+ R GS Sbjct: 196 PHTDPAGKVWPRIIEE-GAILSEEWLESTISPSKFPKRNRLISGISKGTVIVESKSRGGS 254 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPD 292 L+TA AL+Q REVF++PG I + S GP+ LI K A LV E+I+ L + Sbjct: 255 LITASYALDQNREVFSVPGSIFSTTSAGPNALIEKSQAKLVNGAEDIIAEL---CSYPAT 311 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + +P + + +L + +E +D++AE+ G E++ L E+EL I Sbjct: 312 PEKTIPDTPVRVPLTPEETIILDHFSEEPLHIDMLAEKTGIEPSELLVHLFEMELKNLIE 371 Query: 353 AVPGGYV 359 PG Sbjct: 372 QQPGQMF 378 >UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVU7_9BACL Length = 373 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 178/356 (50%), Gaps = 8/356 (2%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLS-FPRKSIESSLC 65 L + + +I + H A ++ GL + R F R IE+ L Sbjct: 21 LHEFPGVGWKTLQQIVAYDEDWEHAIEFTAADWRERGLGPELSLRLSERFTRDWIEAQLE 80 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + +I YP + T P L+ G+ L+ +A+VG+R + YG + Sbjct: 81 QYDGKGIQVITRLDLEYPILMKETAQPPWVLYALGDTRLLNGLSVAMVGTRTPTAYGRKV 140 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 G L G+TI SG+ARGIDGV H+AALQ G +IAVLG ++ +P H + Sbjct: 141 GAALAGELCALGITIVSGMARGIDGVCHEAALQAGGTTIAVLGTAIDVAYPPEHVSMYRR 200 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + EQ G ++SE+P+ P FP+RNRII+G++ G +VVEA RSGSL+TA ALE+ R Sbjct: 201 IAEQ-GLVISEYPIGTPGHPGMFPQRNRIIAGIAHGTVVVEADARSGSLITADKALEENR 259 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 ++FA+PGPI +P S G WL+KQGA +VTE ++I E+ + L P A E + Sbjct: 260 DLFAVPGPITSPKSRGTLWLLKQGAKIVTEAKDIWEDYEAFL---PAAKETKKEAVTGNK 316 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + +T D + + G + + LL L + +PG +L Sbjct: 317 LTDEERRIYHMLEQGITSFDDLLVQTGWDFGLLHSVLLSLIMKKTAVQLPGSVYQL 372 >UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter RepID=C6XT86_PEDHD Length = 363 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 10/361 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP-RKSIES 62 + L I S+ + I Q G+ A + L+ + E Sbjct: 7 IGLTLIKSVGDVIARNLLDQFGSAEAIFKADKYQLMEISGIGEVVATQILNHDVFEIAEK 66 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L ++++ ++ E YP +L D P L+ +G H +++VG+R + YG Sbjct: 67 QLAFIKKHRIQVLFYTDENYPWRLRNCHDAPVLLYYKGNADLNHFRIISIVGTRRATEYG 126 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R ETLA V I SGLA GID AHK +LQ N ++ VL +GL+ I+P H + Sbjct: 127 RKLCRELAETLAPYRVIIVSGLAYGIDVAAHKESLQQNIPTVGVLAHGLDRIYPALHKPV 186 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A +L GG L +EF D P NFP+RNRII+G++ +VVEA + G+L+TA A Sbjct: 187 AQKMLLNGGLL-TEFLPDTIPDKENFPKRNRIIAGIADATIVVEATTKGGALITADIANS 245 Query: 243 QGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R+V+A PG + S G ++LIK A L++ ++++ L + + ++S Sbjct: 246 YNRDVYAYPGRTNDQYSAGCNFLIKTNRASLISHAKDLIYYLGW---DEIVSEKSSSQLQ 302 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +++ + +D + ++ ++ LL LE+ G + A+PG + +L Sbjct: 303 LPVGLSDEEQKIVNILTATPIGIDEIGQQLNFSQSKLAMHLLSLEMQGILVALPGKFYKL 362 Query: 362 R 362 Sbjct: 363 N 363 >UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex degensii KC4 RepID=C9RBU2_AMMDK Length = 375 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 171/368 (46%), Gaps = 13/368 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFL-SFPRK 58 + +L + + + + + + R A+ + Sbjct: 5 EERPYYLAWQLLLPGQSRRVKGLISFFGSAREAFLASPRHWASVVGERLAEALAGRKAKL 64 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ L + + YP L P ALF GE+ +A+VG+R Sbjct: 65 DLKKEEERLRKSGVRYVTLAEPEYPALLREIDSPPAALFYLGEIRQ-EERAVAIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG LA GVT+ SGLARGID AH+ AL G ++AVLG G + +PR Sbjct: 124 TRYGREVAESLASDLARFGVTVVSGLARGIDAAAHRGALSGGGRTLAVLGTGCDRCYPRE 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ GALVSEFPL ++FP RNRII+GL V+VVEA +SG+L+TA Sbjct: 184 NWNLWREI-ERKGALVSEFPLGTEARPWHFPVRNRIIAGLVHAVIVVEAPEKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALE GREV A+PG + P ++G H L+KQGA LV + E++LE L + + + + + Sbjct: 243 LALEYGREVLAVPGRVTTPQAKGSHLLLKQGAYLVEKAEDVLEVLGWEIIGAEEEKDLA- 301 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + E+++ + ++ + ER PV ++ L LEL G + GG Sbjct: 302 -------LNPEEEEIVSLLAAGFLSLEELVERGKMPVDACLSLLSMLELKGVVRPGGGGT 354 Query: 359 VRLRRACH 366 L R Sbjct: 355 YLLTRQGE 362 >UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7K2_9CLOT Length = 348 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 109/359 (30%), Positives = 173/359 (48%), Gaps = 18/359 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E+W L SIS+ + + + +S+I Q+ + Q + + I Sbjct: 4 MKNDELWFILTSISN---EKKLLLLEKYENESNIRN---QKNEIREFQKIKDKDISEEKI 57 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ I S+ YP L + P LF +G L L AV+G+R + Sbjct: 58 SDFNNYINSNGIGYITIKSKEYPETLKHIEEPPYVLFYKGNLELLMGSLAAVIGARKCTQ 117 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG ++ L+ +T+ SGLA GID VA K AL+ +G +I +LG G++ ++P+ + Sbjct: 118 YGIEIAKIMGRELSENNITVVSGLAAGIDSVAQKVALEYSGKTIGILGCGIDIVYPKCNK 177 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + G L+SEF PP++YNFPRRNRIISG+S V+VVEA +SG+L+T A Sbjct: 178 FLYEKVI-REGLLISEFLPKTPPMSYNFPRRNRIISGISDKVIVVEATKKSGTLITVDYA 236 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L G+E+ A+PGP+ N SEG + LI+ GA T E++ + N + Sbjct: 237 LSIGKEIMAVPGPVINGNSEGCNKLIRDGAKPFTGMEDLYDFFNIKKDIKEKNENNGY-- 294 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 LL + +E +D + E + L E++ I +PG Y Sbjct: 295 ---------KEYLLKVIDNEPKHLDDIIESVNVDRKVLFELLFEMQNRNEIICLPGNYY 344 >UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQ31_9SYNE Length = 411 Score = 347 bits (891), Expect = 3e-94, Method: Composition-based stats. Identities = 113/408 (27%), Positives = 179/408 (43%), Gaps = 50/408 (12%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FPR 57 + WL + + + R+ + G+ L A+R +S + Sbjct: 4 ERAYWLAWSQVKHVGPVTIKRLWEHFGTLELAWQATASELLKVDGIGLLSAERIVSVRSK 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHALHSFQLAVVGS 115 + E L E+ N YP L A D P L+ G L L+ + +VG+ Sbjct: 64 LNPEQLLVEHEKKNKAFWTPVDADYPALLFAINDPPPVLYYRGSLRLSDLNRLTVGIVGT 123 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+RW + + L+ +G I SGLA GID AH L G+++AV+G G++ ++ Sbjct: 124 RRPSTYGKRWTQRLSQRLSQQGAVIISGLAAGIDTEAHTGCLYQQGLTVAVVGTGVDIVY 183 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ L ++E G +VSE+P P +FP+RNRII+GLS+ +LV EA RSG+L+ Sbjct: 184 PARNQSLYQQVVE-NGLVVSEYPDGTGPDRTHFPQRNRIIAGLSRAILVTEAPARSGALI 242 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GREV+ALP +GN EG LI +GA ++ + +++ L+ A Sbjct: 243 TARLANDYGREVYALPSALGNEQGEGCLRLIAEGAQIILGEQVLMDTLEKLPAVDSSAVP 302 Query: 296 NSFYSPDQQ------------------------------------------DVALPFPEL 313 N S ++ + Sbjct: 303 NRTVSSQSDLLKKTTSEKVSSKRDIDTKAVGNLETSEALEINSTDLKKAISELTPVLANV 362 Query: 314 LANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L V E T VD + ++ V++ L +LEL+G + +PG + Sbjct: 363 LEAVAIEPTIVDYIVQQTQMETGIVLSALFQLELSGMVIQLPGMQYQR 410 >UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellaceae RepID=A6VLU4_ACTSZ Length = 376 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 138/351 (39%), Positives = 188/351 (53%), Gaps = 14/351 (3%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAHWVA--KQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 M E LRL+ + L + + +I + DA G T Q +R+ R Sbjct: 1 MDKYTETLLRLLQVPRLGANTVSQILTTIELNTLLSYDADAFYAIGWTTYQIKRWFKPER 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K I+ +L W ++ + +I YP L P LFV+G L Q+A+VGSR Sbjct: 61 KYIDPALEWGQKRGNQIIHCFHLDYPYLLKQIESSPPVLFVQGNTGLLIHPQIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG W + F L G +TSGLA+GID +H+AAL V G ++AVLGNGLN I+P Sbjct: 121 CSDYGSYWAKYFAAELCAAGFAVTSGLAKGIDAYSHQAALDVQGKTVAVLGNGLNQIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++L+ G LV+EF D PPL NFPRRNRIISGLS LVVEA+ RSGSL+TA Sbjct: 181 VNRKLAQAILDNDGTLVTEFIPDQPPLPANFPRRNRIISGLSLATLVVEASARSGSLITA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL---------- 287 R ALEQ REVFA+PG + N S G H LIKQGA+LV ++++EN+ + Sbjct: 241 RFALEQNREVFAIPGNLNNDFSRGCHKLIKQGAMLVENAKDVIENIPYYGFTNMQLRDVK 300 Query: 288 -HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 P + P + P+L +G ++ VD +A + G V Sbjct: 301 DVLKATVPCPNPRPPSARHPDPQHPDLFKLIGHDLISVDELATQTGLGVEA 351 >UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR97_CHIPD Length = 378 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 9/369 (2%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSF 55 M + + L I + ++ S + ++ G + + +A F Sbjct: 9 MQEELRHQIALTQIPQIGDIVAKKLLAHFGSASEVLNASRKELGNIPDIGIVRADAIFQF 68 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + + + +LE+ N I S YP +L D P L+ +G + + +++VG Sbjct: 69 RDYRKADKEIDFLEKHNIQAIFYTSTAYPKRLHHCADSPVMLYYKGTTNLNAARMVSIVG 128 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R YG+ E L + V I SG+A GID +AHK A+Q +I VL +GL+ I Sbjct: 129 TRTPGEYGKNMCAQLVEALTSHNVVIISGMAYGIDIIAHKRAVQQRIPTIGVLAHGLDRI 188 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P++H A +++ GG L +EFP P +FP RNRI++G++ +V+E+ + GS+ Sbjct: 189 YPQQHRSTAMEMIDNGGLL-TEFPSYTQPDRQHFPMRNRIVAGIADATIVIESGTQGGSM 247 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDA 293 +TA A ++VFA+PG +P + G + LI+ A+L+T + L+ + + P A Sbjct: 248 ITADIANSYNKDVFAIPGRANDPHAAGCNELIRTNKAMLITSATDFLQTMGWHTDNTPSA 307 Query: 294 PENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ GD +D + + + P +V + +L+LE+ + Sbjct: 308 VKFNPQKELFITLDDAEKHIVTLFSGDAEKHIDELRKESHLPGSQVNSLVLKLEMRHVLK 367 Query: 353 AVPGGYVRL 361 ++PG +L Sbjct: 368 SLPGQKYQL 376 >UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KCD4_9GAMM Length = 362 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 128/364 (35%), Positives = 188/364 (51%), Gaps = 8/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQA-QRFLSFPR 57 +D WL L+ + + + ++ GL + A + Sbjct: 1 MDLIYWLLLLKAPHVGVRTFYKALKHFETPEQVFLASKSERKECGLFRQAALDYLENQDH 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +++ L W++ + H++ E YP QL +D P L++ G + L Q A+VGSR Sbjct: 61 SVVQADLDWVKSDDCHIVTLIDESYPKQLKTISDPPPLLYIRGSVECLSKTQFAIVGSRN 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G++ F + L+ G+ ITSG+A GID AH AL+V+ +IAV G GL+ I+P Sbjct: 121 PTPGGKQNAYQFSQELSRAGMIITSGMASGIDAQAHIGALEVDCPTIAVCGTGLDRIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + GALVSEF + P+A NFPRRNRIISGLS G LVVEA+++SG+++TA Sbjct: 181 KHKSLAHQI-SLKGALVSEFCIGTSPIANNFPRRNRIISGLSLGTLVVEASIKSGTMITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + A +QGREVFA+P I NP S+G H LIKQGA LV +I+E L L + + Sbjct: 240 KLAADQGREVFAIPSSIHNPLSQGCHQLIKQGAKLVDTINDIIEELPIDL---KSSTKPL 296 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S V LL + E +D + E++G + +LL LEL + G Sbjct: 297 NVSNCTNSVDKTPFVLLKYLSYEAMTIDKMVEKSGLSPQVITQELLLLELENRVEKASGS 356 Query: 358 YVRL 361 L Sbjct: 357 AYAL 360 >UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas macleodii RepID=B4S293_ALTMD Length = 369 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 196/358 (54%), Gaps = 5/358 (1%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W+ L S + ++ ++ Q + L +K I+++L Sbjct: 14 AWIALASAQRVSPKLWLQALEQHQCSPI--ELLSQASSLGSTVTTLTDQITQKHIDTALN 71 Query: 66 WLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W + N H+I DS YPP L P LF G L Q+A+VGSR S G+R Sbjct: 72 WAKVSENRHVITLDSPDYPPLLKQLDSPPLVLFATGSKALLKQPQIAIVGSRRASIQGKR 131 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 F L+ G+ ITSGLA GID AH A+ + +IAV+G G + I+P ++++L Sbjct: 132 IATDFAMGLSNNGIAITSGLAMGIDSAAHVGAISGSIGTIAVMGTGPDKIYPAKNSKLYN 191 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + GG V+EF P ++FPRRNRII+ LS G LVVEA ++SG+L+TA A + G Sbjct: 192 EIHDSGGVSVTEFFPGQGPKPWHFPRRNRIIAALSLGTLVVEAKIKSGTLITANLAADMG 251 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 R+VFA+PG + + SEG HWLI+QGA LVT +IL L+ G+ + + + Sbjct: 252 RDVFAVPGSLFHAYSEGCHWLIQQGAKLVTNVNDIL--LEIGVQPQQMSFDVGEQNEKSA 309 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +L +LLA+V ++T +DV+A+R V + + LLE EL G +AAVPGGYV+LR Sbjct: 310 VNSLATDKLLASVEYDITAIDVIAQRNALSVSQAMASLLEYELRGLVAAVPGGYVKLR 367 >UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2S1_9BACT Length = 380 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 116/375 (30%), Positives = 183/375 (48%), Gaps = 14/375 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M+D E + L IS + + + + ++ G+ A + F Sbjct: 1 MLDREACIVLNMISGVGYVKYTALCDEFGSPAGVFRRSARELMHVPGIGETLAVKIAEFD 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + L ++ +I E YP L D P L+V G L + +AVVGS Sbjct: 61 WEGELARELELADKAGVRVITLFDEAYPAVLRNLYDPPLCLYVRGRLPEFPEYAVAVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG R R G T+ SGLA G+D VAH ++ G ++AVLG GL IH Sbjct: 121 RRMSDYGARMTRQITAEAVAAGYTVVSGLAYGVDTVAHGMTVEQGGCTVAVLGGGLMRIH 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA ++E GGA++SEFP++ P +FPRRNRI++GL++ +V EA + SG+L+ Sbjct: 181 PQENVPLARRIVETGGAVISEFPMNFPVSRTSFPRRNRIVAGLARLTIVTEAGIGSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI-LVTEPEEILENLQFGLHWLP--- 291 TAR AL+ GR+VFA+PG NP ++G H LIK+GA L+ ++L + G +LP Sbjct: 241 TARLALDNGRDVFAVPGHADNPQAQGCHQLIKEGAAGLIENFSDVLNAIGVGFGYLPGLA 300 Query: 292 -----DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + + S D+ E+ + +D++AE G+ +++ L+ LE Sbjct: 301 PGGEANEDAVPYDSSSVGDLPPEAREIWKLLDGRELSLDLLAEETGRETGALLSTLMMLE 360 Query: 347 LAGWIAAVPGGYVRL 361 + + R Sbjct: 361 MKLLVEHGSDMVYRR 375 >UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVN1_9FIRM Length = 373 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 111/370 (30%), Positives = 175/370 (47%), Gaps = 12/370 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQR-FLSFP 56 M + + W +I+ + ++ S I + LT Q + S Sbjct: 1 MTNNDFYWYWFTNIAGIGVKTQKKLLEHFGHPSTIYNAPESEIKGILTTGQCKEVIASKN 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K IE+S+ LE+ + +S+ YP +L + P L+ G L LA+VG+R Sbjct: 61 QKKIEASIRKLEKREIYFFHRESQEYPERLAQLYEPPNLLYYIGRLPNFSKPILAIVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + R F + LA G+ I SG+A G+D HK AL NG ++ VLG G++TI+P Sbjct: 121 RATIYGRKMAREFAKRLAECGIQIVSGMAAGVDAAGHKGALDANGYTLGVLGGGIDTIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + + GG ++SE+ + + P FP RNRIISGLS G+ V EA RSGSL+T Sbjct: 181 VENFNLYQQVYQMGG-VLSEYNMGISPQKGLFPMRNRIISGLSDGIFVTEAGARSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A LEQG+++FALPG I + S G + LI QGA+LV PE+I++ + Sbjct: 240 ADQGLEQGKDIFALPGRITDCMSRGCNDLISQGAVLVRSPEDIMDIIIKEGKTGNKKKNM 299 Query: 297 SFYSPDQQD------VALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ + + + + + E +G E+ L++ EL Sbjct: 300 DVNREKFFKEQKFFCENKKEEKVYSLLDEIHPMTFENLLENSGFSAFELQHILMKFELKN 359 Query: 350 WIAAVPGGYV 359 I + Sbjct: 360 IIYQIEQNVY 369 >UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H0_9CLOT Length = 360 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 173/362 (47%), Gaps = 9/362 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQ--RFL-SFPR 57 M D W L L + + + + + Q + RF+ S Sbjct: 1 MEDKLYWYWLCGKVRLPIKKQKELMDIFIHPKELYKINPEILKEHMTQLEYDRFVHSRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +I+ L + N I YP +L D P +F +G+ + +A+VGSR Sbjct: 61 TAIKKGYEALHRENIRFIIQKEAAYPNRLRKIYDAPYGIFQKGQPYEEKELSIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + F + LA +GV I SGLARG+DG H+ + G ++ VLG G++ I+P+ Sbjct: 121 PTTYGFEISKKFAKELAQQGVQIVSGLARGVDGTVHREIIDKKGQAVGVLGCGIDLIYPK 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +L + ++SE+P PL ++FP RNRIISGLS G+LV EA RSGSL+TA Sbjct: 181 ENFQLFYDMYANQ-TVISEYPPGSEPLKWHFPERNRIISGLSDGILVTEARARSGSLITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C L+Q +EVFA+PG I + +G H LIKQGA LV ++IL + P++S Sbjct: 240 DCGLDQNKEVFAVPGMITDKHCQGCHGLIKQGAKLVENVDDILTEFSEFTGFSRKFPKHS 299 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S +A + + + +D + + EV+ L +LE G+I + Sbjct: 300 AKS-----LAKAEKRVYDMLSLKPKYIDEILSTSQDSYEEVIQALFQLEAKGYIKQIHQN 354 Query: 358 YV 359 Sbjct: 355 LY 356 >UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=A5N825_CLOK5 Length = 366 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 99/367 (26%), Positives = 182/367 (49%), Gaps = 20/367 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL--TLRQAQRF-----L 53 M ++W + +S+ + I + + I + ++++ + Sbjct: 1 MNIYDLWFASVRMSN---KIKINIINRFSNIQEIYEKNIYDNNYIYSVKKNDKIYMELKK 57 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAV 112 ++ + +++ + + + + E YP +L D P LF +G + L++ +A+ Sbjct: 58 AWNTEKLQNLMEYCLKEGIKTVNFYEEDYPERLKNYDDSPPVLFYKGNIKNLNNNLNVAL 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S+YGE L + ++ + + SG+ARGID AH+ +++ G + VLG+G++ Sbjct: 118 VGARDCSFYGENITSLISKEVSINNINVISGMARGIDSCAHRTSIESGGYTCGVLGSGVD 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P ++ +L +L Q G ++SEF P AYNFP RNRIISGLS +++VEA +SG Sbjct: 178 VIYPSKNKKLYEDIL-QKGCVLSEFIPKTRPYAYNFPLRNRIISGLSDVIIIVEAGDKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA CALEQG++V A+PG + + S G + LI+ GA + T +++ + L Sbjct: 237 ALITAGCALEQGKDVMAVPGSVFSSKSRGTNKLIRDGAHVFTCLQDLFQLLSLSYMNKNY 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 E + ++L +G +D + + ++ L EL+L I Sbjct: 297 KKE--------DILNDKEEKILKIIGQIPRNIDEICRITNIDIKQLYELLFELQLKNKII 348 Query: 353 AVPGGYV 359 + G Y Sbjct: 349 CLSGNYY 355 >UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6U9_ACIC5 Length = 401 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 126/379 (33%), Positives = 180/379 (47%), Gaps = 15/379 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG---LTLRQAQRFLS-FPRK 58 D W+ L + +++ + + L Q L AQ + Sbjct: 21 DRLAWVALALTPGMGPRRILQAVEAAGSAQALLDLPLTQLESLRLPAEAAQFLHDGRALR 80 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + + ++ E YP +L D P L+V G+ L +AVVG+R Sbjct: 81 AAQQEAERVAAAGAQIVTCIDEAYPERLREIYDAPPILWVRGDASLLKRPSIAVVGTRHP 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + LA G+ I SG+ARGID AHK AL ++A+ G G++ I+P+ Sbjct: 141 TPYGAGMAEMLSRDLAANGLLILSGMARGIDTAAHKGALAAKKPTLAIWGTGVDVIYPKE 200 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA ++ GGA+VSE PL P NFP+RNRI+SG+S GVLVVE SG+ VTAR Sbjct: 201 NKALAEQIVATGGAIVSELPLGTFPAPQNFPKRNRILSGISFGVLVVEGGEFSGTRVTAR 260 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 CALEQ REVFA+PG + N + GP+ LIKQGA L E++ E+L + A Sbjct: 261 CALEQSREVFAVPGNVTNKQAWGPNTLIKQGAKLTATWEDVWEDLPTDVRVAVTADAVVA 320 Query: 299 YSP-------DQQDVALPFPELLANVG-DEVTPVDVVAERA--GQPVPEVVTQLLELELA 348 D A LL + DE ++ + ++ E+ T L ELELA Sbjct: 321 SPEPVTASLFDDNTAAPVEAALLRILRHDEALQMEEILQKLEGELSSSEIFTALFELELA 380 Query: 349 GWIAAVPG-GYVRLRRACH 366 G I +PG YV+ A Sbjct: 381 GRIRQLPGKNYVKSFPAAR 399 >UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C5EIV8_9FIRM Length = 328 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 116/320 (36%), Positives = 174/320 (54%), Gaps = 8/320 (2%) Query: 45 TLRQAQRFLSFPR--KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + +Q F ++ + + + L + I YP +L DYP L+V+GEL Sbjct: 11 SAKQCPEFDAWKKQLEPMRQEYHTLGEKGIRYITPLDTEYPERLRHIYDYPMGLYVKGEL 70 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 AV+G+R + YG++ LA +GV I SGLA GIDG H+ A++ G Sbjct: 71 PGDGYPSAAVIGARNCTSYGKQSAEYMGRELAAQGVQIISGLALGIDGAGHEGAVKGRGK 130 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 + AVLG G+N +PR + RL +LE GG ++SE+P D P A NFP RNRIISGLS + Sbjct: 131 TFAVLGCGVNICYPRTNYRLFEQILENGG-ILSEYPPDEEPRARNFPARNRIISGLSDVI 189 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LV+EA +SGSL+TA+ LEQG+E+FALPG I + SEG ++LI+ GA ++T P ++LE+ Sbjct: 190 LVMEARQKSGSLITAQLGLEQGKEIFALPGRITDALSEGCNYLIRAGAGILTSPVDVLES 249 Query: 283 LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 + Y + +A + + + E ++ +A + G PV + ++ L Sbjct: 250 MGIFY-----EKPMFSYEKADKGLAKFEKMVYSCLDSEPRHLEQIAMQTGIPVSQCMSTL 304 Query: 343 LELELAGWIAAVPGGYVRLR 362 ELEL G+ G R Sbjct: 305 CELELGGFALRTNGQCYIRR 324 >UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula baltica RepID=Q7UEW1_RHOBA Length = 455 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 171/364 (46%), Gaps = 10/364 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRK-SIE 61 ++L + L + + I + G+ + A + IE Sbjct: 92 LVQLCLLPGLGPRTLTSLMEAFGSARAILNADKNSLASVHGVGPKLAHVIDTASDHVDIE 151 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 W + +++ YP + D P +F G + + +A+VG+R + Y Sbjct: 152 DVFAWCAAMDVNILRRGQASYPAAMEELDDAPPLMFCRGSILPRDTISVAIVGTRHATAY 211 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + R LA GVTI SGLARG+D AH+AAL+ G +IAVLG GL I+P ++ Sbjct: 212 GLQQTRRIAMDLARAGVTIVSGLARGVDTAAHRAALEAEGRTIAVLGGGLGKIYPAENSP 271 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + E GA++SE+ P FP+RNRII+ L + LV+EA +RSGSL+TAR A Sbjct: 272 LADKISEH-GAVISEYAPMAQPRGGMFPQRNRIIAALGQATLVIEAPMRSGSLITARLAS 330 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS---- 297 E G V ALPG + + S+G H LI+ GA LV +++LE L + A Sbjct: 331 ELGHSVGALPGQVNSRASQGCHHLIRDGATLVQHADDVLELLGPLSGNVSLATAVEGGDV 390 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + ++LA VG T +D V +G P V + LE+ ++ + G Sbjct: 391 VRDGREMTLNDVERQVLAAVGTSGTAIDEVTLSSGLPASRVNAIVSILEMKRFVRRLSGQ 450 Query: 358 YVRL 361 YV Sbjct: 451 YVSR 454 >UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogaceae RepID=B1L9Q3_THESQ Length = 337 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 166/336 (49%), Gaps = 16/336 (4%) Query: 27 WVAKQSHIDAVVLQQTGLTLRQAQRFLSFP-RKSIESSLCWLEQPNHHLIPADSEFYPPQ 85 + + + ++ ++FL ++ +E + + N L+ + YP Sbjct: 16 HLRELEPELPLEKFLKNADPKKTRKFLEKCGKEELERQKELIRKHNVKLVSFWEDDYPQH 75 Query: 86 LLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 L P LFV G+ L + VVG+R + YG + F + L+ I SG+A Sbjct: 76 LREIRYPPAVLFVRGDAELLKEKCVGVVGTRRPTSYGVNVTKRFVKLLSEY-FVIVSGMA 134 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 GID VAHK AL G ++AVLG G++ ++PR + RL ++ + G +VSE+P+ Sbjct: 135 FGIDSVAHKEALSSGGKTVAVLGTGVDVVYPRSNERLFHEIV-KNGCVVSEYPMGTRARK 193 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 ++FP RNRII+GLS ++V EA ++SG+L+T + ALE GR+VFA+PG I SEG ++L Sbjct: 194 HHFPARNRIIAGLSDAIIVTEAPIKSGALITVKFALESGRDVFAVPGDIDRKTSEGTNYL 253 Query: 266 IKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 IK GA +T+ E++ + P + ++ + VD Sbjct: 254 IKSGAYPLTDEEDLETHFGIRRIASPS-------------LDDDKKKIYDLLRSSPKTVD 300 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + E G V EV+ + E+EL G I G Y L Sbjct: 301 ELVEELGWSVSEVLRVISEMELMGMIWFDGGAYRLL 336 >UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X184_DESRD Length = 395 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 119/380 (31%), Positives = 169/380 (44%), Gaps = 15/380 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF----PR 57 + L L L R+ A + Q +F Sbjct: 14 EELWACLALRYTPGLGPKTQRRLFDAYGSARRAVADAAHWGQWDWMRPQAVAAFTSRKWE 73 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + ++ + YP +L P ++ G+ LH+ +A+VGSR Sbjct: 74 QEARREWDAARRQEMRVVLWSEDQYPVRLREIEAAPPFVYAYGDTSLLHAPCVAMVGSRQ 133 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG++ R LA G+T+ SG A+GID AH AL G S+AV+G GL+ ++P Sbjct: 134 CSRYGKKVARALAADLAQAGITVVSGFAQGIDSHAHTGALNGVGSSVAVMGTGLDIVYPA 193 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R +L + G L+SEF PP NFPRRNRIISGLS V+VVEAAL+SGSL+TA Sbjct: 194 RQHQLWQEVAAH-GCLISEFAPGTPPEPKNFPRRNRIISGLSLAVVVVEAALQSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + ALEQ REVF +PG + G G H L++ GA LV E+I+++L + P Sbjct: 253 QLALEQDREVFVVPGSVLESGFAGGHALLRDGARLVRNAEDIVQDLGPMVSVTSPRPGAL 312 Query: 298 FYSPDQQDVALP---------FPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELEL 347 P Q A ++A + +E VDV + LL LE+ Sbjct: 313 PLDPPQDRSASELTWRGGSALENAVVARLSEEDRVHVDVFLRELADSSQAINHALLMLEM 372 Query: 348 AGWIAAVPGGYVRLRRACHV 367 + +PG Y L V Sbjct: 373 QEVVEKLPGMYYALAPGVRV 392 >UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2TJ37_CLOBB Length = 352 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 184/363 (50%), Gaps = 19/363 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M++ E+W L+ IS+ + + + + +I + ++ +F + + Sbjct: 1 MLNYELWFILLDISN---KEKINLIDEYESEENIYNNFENILKENKKLQKKLGNFEKNDL 57 Query: 61 ESSL----CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q I + Y +L P LF +G+++ ++ +A+VG+R Sbjct: 58 VYQIISVNNTLNQKGIGYITYSNPLYKERLKLLLPTPYYLFYKGDINLINDKSIAIVGAR 117 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y +L + + T +T+ SG ARG+D +AHK+AL+ G +I VLG G++ ++P Sbjct: 118 KCSNYALVVTKLLTKEIITNNITLISGGARGVDSIAHKSALENEGKTIIVLGCGIDVVYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + ++ + G ++SEFPL PL +NFP RNRIISGLS+GV+VVEA+ +SGSL+T Sbjct: 178 SENIALFSKVI-KDGLIISEFPLGTKPLRHNFPLRNRIISGLSEGVIVVEASEKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A EQ ++V +PG I G++G + LIK G +++ +++ + Sbjct: 237 ARIAQEQNKDVLVVPGSILYEGAKGSNKLIKDGCDVLSSIDDLNKFFD-----------T 285 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + + E+L + D +D + +++ + L E+++ I +PG Sbjct: 286 NHIDIEPMKIRPEKREILDMITDAPIHIDDIFKKSCVDRGALYALLFEMQIKNEIICLPG 345 Query: 357 GYV 359 Y Sbjct: 346 NYY 348 >UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium perfringens RepID=Q0SSB7_CLOPS Length = 360 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 9/362 (2%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + + + L S+ + + V + + + + +I ++ A +F + Sbjct: 1 MKEVDLNYKIWLGSLK-ISNNIKVELLNQLGNEENIYIHRKDIEETGIKCASKFKNDINI 59 Query: 59 SIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + + ++ ++ + YP +L + P LF +G+L +A+VGSR Sbjct: 60 DLNSRVINDINKKDYKIVTYLDKDYPKRLKNIDEPPYILFYKGDLERAEDTNVAIVGSRK 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 YG+R L L GV I SG A G+D AHK ++ N ++AV G G+N +P Sbjct: 120 CDSYGKRCASLIASGLGKAGVGIVSGGAFGVDTEAHKKCVEENFYNVAVFGCGINLDYPV 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L ++ + G ++SEF D PPL YNFP+RNRIISGLS+ V+VV+A +SGSL+TA Sbjct: 180 YNRELYKKII-KNGCIISEFFPDTPPLRYNFPQRNRIISGLSEAVIVVQAGEKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A+ QG++VFA+PG + + S+G + LIK GA + T ++L ++ F + ++ Sbjct: 239 NYAINQGKDVFAVPGDVFSSQSKGCNNLIKDGAGIFTNIGDLLNSIHFKIKKEGKCNKDG 298 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + LL+ + + + +D + + L EL+ I +PG Sbjct: 299 KKEEN----SEINQLLLSILENNILHIDDIIRVTNIDTSIIYELLCELQFENKIEVIPGD 354 Query: 358 YV 359 Y Sbjct: 355 YY 356 >UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N67_SOLUE Length = 391 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 125/378 (33%), Positives = 172/378 (45%), Gaps = 23/378 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLS-FPR 57 + WL L + L ++ I L+ GL+ AQ S Sbjct: 9 EEELHWLALKLVPGLGARTSGKLLDRFRTPQAIFRASRTELEAAGLSGAVAQSVASGCTF 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + Q L+ YP L D P LF G + L + L VVG+R Sbjct: 69 EDAAQQQERMFQSGAVLVTIGDPRYPRPLREIFDPPILLFARGRVDLLQTLALGVVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA G+TI SG+ARGID AHK AL G +IAVLG G++ ++P Sbjct: 129 PTPYGLAVAERLAADLAHAGLTIVSGMARGIDTAAHKGALARGGDTIAVLGCGVDVVYPM 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LAA L G +V+EFP+ NFP RNRIISGLS GVLVVE A SGS +TA Sbjct: 189 ENRKLAAD-LAVKGLIVAEFPMGAVAFPQNFPIRNRIISGLSLGVLVVEGAQYSGSAITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF------------ 285 + A++QGREVFA PG I + S GP+ LIKQGA LV + +++ L Sbjct: 248 KLAIDQGREVFACPGNITSKLSWGPNLLIKQGARLVQDWNDVVAELPPESRRQLIDRGRR 307 Query: 286 ----GLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERA-GQPVPEVV 339 D + S S ++ L + D +D + E+ E++ Sbjct: 308 RLLGDGSASLDETQASLLSDPAPELGTVSRRTLEVLQVDNSIHLDDLLEKVEDTSPSELI 367 Query: 340 TQLLELELAGWIAAVPGG 357 L ELE+ G + +PG Sbjct: 368 AALFELEMLGLVKQLPGK 385 >UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9V3_9FIRM Length = 367 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 117/368 (31%), Positives = 184/368 (50%), Gaps = 14/368 (3%) Query: 2 VDTEI-WLRLMSISSLYGDDMVRIAH-WVAKQSHIDAVVLQQTGLTLRQAQRF----LSF 55 E+ W L SI LY D ++ W DA ++ + + ++ + Sbjct: 7 EKRELEWFWLCSIPGLYEADRKKLLAVWDKPGRVYDAARGREQKIPVLSEKKMDAVRRHW 66 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ I ++ YP QLL DYP LF G + + +AVVG+ Sbjct: 67 ELARAQQEYHKWQRKGIQFISCENPAYPQQLLQIVDYPSGLFCRGRMVSQEETCVAVVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++ G E LA G+++ SG+A GID A +A L G S A+ G G++ + Sbjct: 127 RMCTYNGRNTAESLAERLAENGISVVSGMAYGIDARAQEACLNAGGKSYAIPGCGVDICY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + RL +L++ GG ++SEF PLA++FP RNRIISGLSK V+VVEA +SG+L+ Sbjct: 187 PRENRRLYEALIQSGG-VISEFYPGTAPLAFHFPMRNRIISGLSKIVVVVEARKKSGTLI 245 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+V+A PG + + S G + LI+ GA ++T+ +E LE F L Sbjct: 246 TAELALEQGRDVYAFPGRMQDALSAGCNRLIQDGAGMITDIDEFLETNGFLLKRAAKEKN 305 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +A + + + + + +AE PV +V+ L LEL G ++ Sbjct: 306 SKMV------LASSEKLVYSCLDSDAKNLQTLAEETDIPVWQVMGALSALELKGLVSESG 359 Query: 356 -GGYVRLR 362 YV+++ Sbjct: 360 KNNYVKMK 367 >UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67PC8_SYMTH Length = 386 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 173/371 (46%), Gaps = 17/371 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M +WL + M ++ + + G + L+ Sbjct: 22 MEGALVWLIYQRAPGVGRRRMAQLMRTYPDPEVAWRLGKAELAAVRGFRPDIVEALLAVR 81 Query: 57 -----RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 R+ E L + ++ + YP +L P L+ G +A Sbjct: 82 KSAEARRDAERELERARRAGLRVLCYGTRGYPERLAEIPVPPPVLYQYGPWEPDGRPVVA 141 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + YG LA G + SG+ARGID AH+ AL+ G S+AVLG G Sbjct: 142 IVGTRRPTAYGLAVAEQLGRELAQLGAVVVSGMARGIDTEAHRGALEAGGTSVAVLGGGA 201 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P+ A L + E GA++SE P P NFP RNRII+GLS GV++VEA RS Sbjct: 202 DVCYPQESAALYRQMRET-GAILSEQPPGTAPRPENFPERNRIITGLSHGVILVEAGERS 260 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+L+TA A+EQ R++F +PGP+ +P S G + ++ GA L ++LE+L F LP Sbjct: 261 GTLITAAHAIEQDRDLFVVPGPVTSPLSRGLYKYVRDGAGLAVSAAQVLEDLGF----LP 316 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 A ++P + + +L +G +AE +G P+PEV L LE+ + Sbjct: 317 SAEGPLHFTP--RGLTELEQRVLGWMGSAPWWPGDLAESSGLPLPEVQACLTMLEIRSAV 374 Query: 352 AAVP-GGYVRL 361 +P G Y+R+ Sbjct: 375 RRLPDGQYIRI 385 >UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SZ78_9FIRM Length = 360 Score = 342 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 185/365 (50%), Gaps = 14/365 (3%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLSFPR 57 M+D E+ L ++ + + +A + + Q LT +Q + + Sbjct: 1 MIDDELLYLWYGMMNRMVHTQKIELAFRFGGIRGLWETSEKVLQESLTKKQFEMVMENRT 60 Query: 58 KSIESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAVVG 114 + LE + + + YP +L D P LF G+++ L + +AVVG Sbjct: 61 EHAVLEYRNRLEAGHITYVYPGHDCYPGKLYDIPDPPMLLFAAGDINVLKDMAPAVAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG ++ GVTI SG+A GIDG AH+AAL G ++AVLG+G+N Sbjct: 121 ARKASVYGRTMADRISADVSAAGVTIVSGMALGIDGTAHRAALSGGGKTVAVLGSGINVP 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + + S++ GG +VSE LDV P A+ FP RNRIISG+S GVLVVEA +SGSL Sbjct: 181 YPRENYDIYRSIVNGGGVVVSESGLDVAPEAFRFPYRNRIISGMSDGVLVVEAREKSGSL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGR+V+A+PG + + GS G + LIK GA+ VT E+ILE L Sbjct: 241 ITADQALEQGRDVYAVPGRVTDTGSAGCNNLIKMGAMCVTSSEDILEELGI--------Q 292 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 +++ +A ++ + V E +D + AG V E L ELE + + Sbjct: 293 TVKGQFLNKKLLAPAEKKVYSCVRLESRHIDDICFEAGMTVSETAQILFELEKKRLVKQL 352 Query: 355 PGGYV 359 Y Sbjct: 353 VRNYY 357 >UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacteria RepID=A9KH16_COXBN Length = 308 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 178/298 (59%), Gaps = 10/298 (3%) Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W PNHH++ D YP L D P L++ G+ L+ Q A+VGSR + G Sbjct: 21 EWTTAPNHHILTLDHPSYPTLLKEIPDPPKKLYIMGDPLILNQPQFAIVGSRNPTVTGCE 80 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + E L G ITSGLA GID +H+ AL+ G +IAVLG+GL I+PRRH RLA Sbjct: 81 IAQEMAEKLVQAGFHITSGLALGIDAASHRVALKAGGQTIAVLGSGLTNIYPRRHHRLAE 140 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + Q GALVSEFPL +PPL NFPRRNRIISGLS G LVVEA L SGSL+TA+ A EQ Sbjct: 141 QI-SQKGALVSEFPLTMPPLPTNFPRRNRIISGLSLGTLVVEATLGSGSLITAKLAAEQN 199 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G H LIK+GA LV +I+ L + E + S Q Sbjct: 200 REVFAIPGSIRNPLSQGCHALIKEGAKLVDSIGDIIAELSY---------EATGASAPIQ 250 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +LL +G EVT +D + R+G V + LL +EL G+I + PGG +R++ Sbjct: 251 ALDKNEHKLLECIGFEVTSIDQLIARSGFSASIVASLLLRIELQGYIKSTPGGVIRVK 308 >UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE1 Length = 370 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 204/370 (55%), Gaps = 9/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWV----AKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M + L+ + + ++++ A + L GL+ Q ++ + Sbjct: 1 MEKLVAFYALIHCQGVSTNTVLKLTTHFQCDIADIPTLSKETLAAQGLSSAQIEQLKADY 60 Query: 57 RKSIESSLCWLEQPN---HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + I+ + WL+ + +I D YP L D P LFVEG + L QLA+V Sbjct: 61 KIPIQRIMNWLDHDSDCPRQVIYCDDADYPQYLAHLHDRPLLLFVEGNISLLTLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G+R+ F + LA+ ITSGLA+GID AH+ AL NG ++AVLG+G Sbjct: 121 GARRATEHGKRYAFDFAKQLASHHWVITSGLAQGIDAQAHRGALAANGATVAVLGHGHEH 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR HA L +L Q G ++SEF D P NFPRRNRIISGL G LVVEA +SGS Sbjct: 181 MYPRHHAHLRQQILSQQGCIISEFFPDQPAQPKNFPRRNRIISGLGAGTLVVEAKRQSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A+++ R VFALPG I + G LIK+GA+LV E ++I + Sbjct: 241 LITANQAVQENRLVFALPGRIDDENISGCLALIKEGAVLVQEIDDIESEMMEVEKPRHHP 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 S + +++++ LL +VG E+T ++ +A + P+P+V+ QLLE EL+G +AA Sbjct: 301 IYFSTKNKTEENLSPS--NLLDSVGYEITAIENIAAHSSLPLPQVLAQLLEFELSGKVAA 358 Query: 354 VPGGYVRLRR 363 V GGYV+LR Sbjct: 359 VAGGYVKLRS 368 >UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding protein n=16 Tax=Acinetobacter RepID=B2I112_ACIBC Length = 376 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 183/354 (51%), Gaps = 10/354 (2%) Query: 19 DDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSF----PRKSIESSLCWLEQP 70 +I + GL +R F + E + + Q Sbjct: 24 VSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQSQAQFEQLVQQVRQH 83 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 ++ D YP QLL TD+P +F +G+ AL Q+A+VGSR S +G + F Sbjct: 84 TDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFA 143 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ +G I+SGLA GID AH+ A + +IAV G GL+T +P ++ +LA +L + Sbjct: 144 YYLSEKGFFISSGLAYGIDEAAHQGA-STHQRTIAVTGTGLDTTYPAQNKKLAEHILAKN 202 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA+++EF PPL +FPRRNRI+SGLS GVLVVEA L+SGSL+TA A EQG+ VFA+ Sbjct: 203 GAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEATLKSGSLITANKAAEQGKTVFAI 262 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-FGLHWLPDAPENSFYSPDQQDVALP 309 PG I + +G H LI++GAIL+ PE+I+E+L + + + ++ Sbjct: 263 PGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIPEH 322 Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 +L ++ +D + PV E+ + L+ELEL G G Y+R R Sbjct: 323 LIDLYQSLDWVGQNIDQLIVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS 376 >UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium RepID=B1KWM8_CLOBM Length = 361 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 17/367 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRF----L 53 M++ +W +S+ + ++ S+I + + + + + Sbjct: 1 MIELNLWYASAKVSN---NIKTKLLQEFKSVSNIFDYVQNFKYEKNVNINIVKVINNFKI 57 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAV 112 ++ ++ I++ + Q N +I + YP QL D P LF +G + A+ Sbjct: 58 AWNKEKIQNMKNKILQDNIRIINYMEKEYPSQLRNYEDAPAVLFYKGNIEKVNILKSAAI 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR S YG + ++ E LA + I SG+A+GID AH ++ G + A+LG+G++ Sbjct: 118 VGSRKCSIYGMKVTKIISEALADNNIMIVSGMAKGIDYYAHLYCIENRGFTTAILGSGID 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P+++ ++ ++ + G ++SEF PPL+YNFPRRNRIISGLS V+VVEA +SG Sbjct: 178 VVYPKQNKKIYD-IISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+T ALEQG++V A+PG I + S G + +IK+GA + T E+IL + + + Sbjct: 237 SLITTEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINN 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 +N D ++ + E +D + + + + L EL+L + Sbjct: 297 NKDNKMALKDSL-----QGKVYNVLSHEPKHIDDLLKLMDIDIKHLYEVLFELQLKKEVI 351 Query: 353 AVPGGYV 359 + G Y Sbjct: 352 CLAGNYY 358 >UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF53_PARUW Length = 363 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 108/366 (29%), Positives = 182/366 (49%), Gaps = 11/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E + L + + + + + + + + Q+ L ++ I Sbjct: 1 MEELEALMILTDMPLIGPVKVRFLVDYFGSAKKALSASITELSHLPGFKQKILDQWQEHI 60 Query: 61 E-----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++L +E+ + HLI YP QL D+P L+++GEL + + ++G+ Sbjct: 61 RSKKHFANLQLVEKFHTHLISFKDPSYPKQLQNIPDHPPLLYLKGELKPQDNQSITIIGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA G TI SGLARGID AH AL+ G ++A++G+GL I+ Sbjct: 121 RQATLYGLEMAKKLSYELAQAGFTIVSGLARGIDTAAHIGALEAGGRTLAIIGSGLANIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA + + GA++SEF + PP +FP+RNR++SG+S G L++EA +SG+++ Sbjct: 181 PQENHYLADQI-AKKGAVISEFSMSTPPHRSHFPKRNRLVSGMSLGTLLIEAPQKSGAIL 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 T ALEQ + ++ALPG G H LIK AILV E+I++ L P Sbjct: 240 TIENALEQKKHIWALPGRADQVNFRGNHALIKNKKAILVENIEDIVQCLDTFCFTTPIEQ 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ D + LL + E ++ + +RA P+ +V + L+ L L I Sbjct: 300 KH----LDLVHLQQEEIHLLQKLPVEELSIEEIVKRAQLPIQQVNSLLMSLVLKKIIKEF 355 Query: 355 PGGYVR 360 PG + + Sbjct: 356 PGKFYK 361 >UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteria RepID=B7JXG9_CYAP8 Length = 375 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 111/376 (29%), Positives = 182/376 (48%), Gaps = 15/376 (3%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSF 55 M + WL IS + + R+ + + + G+ L+ + L Sbjct: 1 MNQERAYWLAWSQISGVGPVLLKRLEQQFGSLQTAWMVSKSALGEVEGIGLKSLPKILEQ 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQL 110 + + L Q N + YP L P L+ +G+++ L + + Sbjct: 61 RSQINPLQFLEEHSQKNPNFWTPADADYPHLLKEIASPPAVLYYQGQVNLLENQGITPAI 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +VG+R + +G RW + L G T+ SG+A GIDGVAH++ L+ G ++AVLG G Sbjct: 121 GIVGTRYPTEHGRRWTYSITKALVKHGFTVVSGMAAGIDGVAHESCLEAGGRTLAVLGTG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ ++P H +L ++ +Q G ++SE+P P +FP RNRII+GLS+ VLV+EA + Sbjct: 181 VDMVYPSNHRQLHRNI-QQQGLILSEYPAGTPGDRGHFPARNRIIAGLSRAVLVMEAPEK 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SG+L+TAR A E GR+V+ LP + G LI QGA ++ E+LE L H Sbjct: 240 SGALITARYANEFGRDVYTLPNSPDVEQARGCLRLIHQGAEMIVTEGELLEMLGAIPHLD 299 Query: 291 PDAPENSFY----SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 A + S + + ++A ++ + E T DV+ + G EV LL+LE Sbjct: 300 QTAKQLSLFDAPIAKPLPNLAPELLKIFQAIKTEETSFDVIVQTTGLSPGEVSGGLLQLE 359 Query: 347 LAGWIAAVPGGYVRLR 362 L G + +PG + + Sbjct: 360 LEGLVNQLPGMRYQRQ 375 >UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSJ1_9FIRM Length = 370 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 171/371 (46%), Gaps = 18/371 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 ++ L S+ + L+ L+ +A F R+ Sbjct: 7 MERFFLAALCRAPSVGSRVAASLVRVFGSAQDAWHARAEALRAAHLSPERAAALHDFCRR 66 Query: 59 S---IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + E E+ L E YP +L + P LF G L L +A+VG+ Sbjct: 67 NEALPEKIAAACEKGGISLFVPSDEVYPARLKEIYNPPQTLFCRGSLDCLKHPAVAMVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+ LA RG + SG ARGID +HK ALQ G ++AVLG G++ + Sbjct: 127 RHASAYGKGAAEDIALGLAERGFVVVSGAARGIDTASHKGALQA-GATVAVLGCGVDVAY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR +ARL A + E+ GA++SE+ PLA FP RNRIISG++ G +VVEAA RSGSL+ Sbjct: 186 PRENARLLAEIAEK-GAVISEYAPGTAPLAAFFPARNRIISGVAHGTIVVEAAERSGSLI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA AL +GR+VFA+PG I + S G H LI+QGA LV ++ + G +P Sbjct: 245 TAEFALSEGRDVFAVPGSIYSATSRGCHRLIQQGARLVVSAADVAAEYEDGASRTSASP- 303 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 Q++ + A + E +D + R V LL L + G + Sbjct: 304 -------PQELTEEEAAVYALLSREAALSLDELICRLQGKAANVAFLLLGLRVKGLVEET 356 Query: 355 PGGYVRLRRAC 365 P +R A Sbjct: 357 PMRTY-IRSAK 366 >UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteobacteria RepID=Q0AIZ9_NITEC Length = 373 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 186/370 (50%), Gaps = 9/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF----LSFPR 57 D E WLRL + + R+ + + A + +++ Sbjct: 5 RDIESWLRLGLTEGVGSGSLRRLLVAFGDPAEVLAANQRALEGVVKKTVATSIFQRKVDE 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++ WL+ P + LI YP LL D P L+ +G+ L LA+VGSR Sbjct: 65 DKFAKTIEWLQDPLNSLITLADPDYPGLLLNIPDPPPILYFKGQRKFLARPALAIVGSRN 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G F E + G + SGLA+GID AH+ L+ S+A++G GL+ ++P Sbjct: 125 ATPQGFANADAFAEAASNAGFCVISGLAQGIDTAAHQGGLRGASSSMAIVGTGLDLVYPS 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ LA L ++ GAL+SEFPL VP ++ NFPRRNRIISG+ LVVEA L SGSL+TA Sbjct: 185 KNRELAHKLADE-GALISEFPLGVPAMSKNFPRRNRIISGMCHACLVVEATLYSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R ALEQGR+V A+PG I +P S+G H LIKQGA LV ++IL+ L +A + Sbjct: 244 RLALEQGRDVMAIPGSIHSPLSKGCHALIKQGAKLVENIQDILDELNHQPIQQIEAAPVN 303 Query: 298 FYSP----DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 D + LL + +D + R+G V V LL LEL G I + Sbjct: 304 HNETGGLVDASSDCIDDTGLLIYFDYDSIDIDTLCIRSGLTVEAVSAMLLILELEGKIGS 363 Query: 354 VPGGYVRLRR 363 +PGG + R Sbjct: 364 LPGGRYQRVR 373 >UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular organisms RepID=A1TWN3_MARAV Length = 405 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 136/383 (35%), Positives = 187/383 (48%), Gaps = 21/383 (5%) Query: 1 MVDTEI-------WLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQ 50 M D E WL L + RI V + I A L+ GL + Sbjct: 17 MSDQEFLQTPAGQWLLLSLLPRFGIPLRERILGSVDTLTDILPLNAATLRAMGLGGDAVE 76 Query: 51 RFLSFPR--------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 +++ + ++ YP L + P L+ G + Sbjct: 77 AIVAWQAGELSQGVIARALDIYRQCRERGIGVLGQGQAPYPECLRHIHNAPLVLYTLGNV 136 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L QL VVGSR + G R F L+ RG+ ITSGLA GIDG AH AL Sbjct: 137 ELLQRDQLGVVGSRNATRAGLDHARQFSAELSRRGLLITSGLALGIDGAAHAGALDAGYP 196 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AV+G GL+ ++P +H LA ++E G +VSE+P A FP+RNRIISGL++GV Sbjct: 197 TLAVVGCGLDRLYPAQHRNLAHRIIE-NGLIVSEYPPGTQARAAYFPQRNRIISGLARGV 255 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVEA+LRSGSL+TAR ALEQGREVFA+PG + +P + G H LI+QGA LV +++E Sbjct: 256 LVVEASLRSGSLITARTALEQGREVFAIPGSVHSPVARGCHQLIRQGARLVETANDVMEE 315 Query: 283 LQ--FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + P PE + S D + + +G + D + G P +++ Sbjct: 316 LGTWWSMQAQPAEPEATENSSDLSFLDSREIAVFEALGYDPQSTDALGLATGLPADQLLQ 375 Query: 341 QLLELELAGWIAAVPGGYVRLRR 363 LL LEL G A PGGY R R Sbjct: 376 SLLILELEGLAHACPGGYQRTGR 398 >UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G349_ABIDE Length = 366 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 112/366 (30%), Positives = 168/366 (45%), Gaps = 14/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV-----LQQTGLTLRQAQRFLSF 55 M + + L + + + V L+ GL + +R Sbjct: 1 MREELLMFWLSLEGHVAKIKYDILVANYGSLAEAYEAVSKGKCLKLKGLGDKLLERLKKL 60 Query: 56 -PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + IE ++ ++ YP +L P LF +G L ++VVG Sbjct: 61 SDKSEIEEKYECMKDKGVKYSHYFNKDYPDKLRNICSAPIGLFYKGSLPDNEEKIISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SR + G + + L+ GV+I SG+A GID AH ALQ N G + AVLG G + Sbjct: 121 SRDATDKGLYYANKISKELSDSGVSIVSGMALGIDSSAHYGALQGNKGKTYAVLGCGADV 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L S++E+GG ++SEFPL P+ NFP+RNRIISG+S GV VVEA +SGS Sbjct: 181 CYPPNNIELYLSIIEKGG-VISEFPLGTQPVRANFPQRNRIISGISDGVFVVEARDKSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA LEQG+ ++ALPG P S G + LI+ GA LV E ++ILE+ F + + Sbjct: 240 LITADMGLEQGKNIYALPGRSEEPLSRGTNKLIQYGAKLVNEAKDILEDFDFPILNIKQE 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + + A + + + G E+ LLELE G++ Sbjct: 300 CLQNLI------LESHEKIVYATLCLTPKHISEILSETGLDEGELFKVLLELEFKGYVRR 353 Query: 354 VPGGYV 359 Y Sbjct: 354 TSFEYY 359 >UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=Q1N3W6_9GAMM Length = 391 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 138/371 (37%), Positives = 201/371 (54%), Gaps = 18/371 (4%) Query: 7 WLRLMSISSLYGDDMVRI--AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR----KSI 60 +L L I + + I A + D +Q G++L++ Q + R K++ Sbjct: 15 YLALSCIKGIGIQTLSLIHCADGLDYVHQWDEQAFRQLGISLKRTQLLMDGLRNPFSKTL 74 Query: 61 ESSLCWLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 E +L W + NHH++ SE YP +L P L V+G+L +L + Q+A+VGSR S Sbjct: 75 EQTLDWQQSADNHHIVTPVSEAYPDRLGHIATPPTMLMVKGQLDSLLAAQVAIVGSRHPS 134 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G F LA GV +TSGLARGID AH+ AL + +IAVLG+GLN I+P+ + Sbjct: 135 FQGRHEAYEFAVGLANSGVVVTSGLARGIDTQAHQGALDADAATIAVLGSGLNHIYPKEN 194 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A LA + Q GALVSEF L P A +FP+RNRI+SGLS GVLV+EA L SGSL+TAR Sbjct: 195 AELAEQIC-QKGALVSEFALHTRPSAGHFPKRNRIVSGLSLGVLVIEAHLMSGSLITARQ 253 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA------ 293 ALEQ REVFA+PG + N G H+LI+QGA LV P++IL +LQ + + Sbjct: 254 ALEQNREVFAIPGNLSNVQKSGCHYLIRQGATLVESPDQILLDLQGQIRQTQNITLMLAN 313 Query: 294 ----PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + + ++ + ++ + + G V ++ LL++EL Sbjct: 314 DSHNSKPKVSREIPEGMQPEHYQVYRFLDQGGVGMEQLIQHTGLSVSKLNELLLDMELNM 373 Query: 350 WIAAVPGGYVR 360 W+ G + R Sbjct: 374 WVTNEQGLFFR 384 >UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L8_DESDG Length = 425 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 132/409 (32%), Positives = 174/409 (42%), Gaps = 52/409 (12%) Query: 1 MVD---TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFL 53 M + W L L + R+ W D G+ +A Sbjct: 16 MDEAGRRNFWASLALRYSCGIGPRTWKRLLTWYGSPYAAVMDVADWAAAGVPATRADSCR 75 Query: 54 S-FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 R+ + + + ++ + YP +L D P L+ G+ L + + V Sbjct: 76 RGLWREQARAEWDAAGKAGYKILLWNDPRYPERLKEIPDPPLFLYYLGDASLLSAPMVGV 135 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG L+ RG+TI SGLARGID AH AAL+ G S+AVLGNG + Sbjct: 136 VGARRCSRYGLDVAACISRELSRRGITIASGLARGIDRQAHIAALEGIGSSVAVLGNGPD 195 Query: 173 TIHPRRHAR-LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 I+P + L + L G +V+EF VPP + NFP RNRIISGLS G+LVVEAA RS Sbjct: 196 QIYPPENRDVLFS--LAGRGLVVTEFAPGVPPESKNFPVRNRIISGLSLGILVVEAAARS 253 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TAR ALEQGREVFA+PG I S G H LIKQGA V E+IL L L Sbjct: 254 GSLITARLALEQGREVFAVPGRITAQTSSGCHELIKQGARTVCGAEDILLELAPLLRAAA 313 Query: 292 DAPENSF----------------------------------------YSPDQQDVALPFP 311 + P + P Sbjct: 314 EKPSSPAVQEPMHPHTAHSVPQSAGACCHSDVPSVVAAAPADGGAAGTEPATSPADADGQ 373 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++LA + +DV+ V LL LE+AG + PG Sbjct: 374 KVLAVLARRGGLHIDVLCRELDWDAGRVSAALLLLEIAGSVRQAPGMLY 422 >UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDV3_MAGSM Length = 365 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 125/364 (34%), Positives = 174/364 (47%), Gaps = 13/364 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 WL+LM L ++ A I + R +E L Sbjct: 8 AWLQLMLTPGLGPISLLHYERQFATPHAILRAL-------PRLKPELTLADASWVERLLT 60 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGER 124 Q + YP QLL +D P LF++G+ L +A+VG+R S GER Sbjct: 61 QTHQMGATALHWREPAYPQQLLEISDPPPLLFIQGDGALLNQEPLIAMVGTRRCSRNGER 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L +T SGLA GID AH +L G ++AVLG GL+ +P+ + +L A Sbjct: 121 FAHKLAADLGQMRLTTVSGLAVGIDSAAHAGSLLGGGATVAVLGCGLDVSYPKPNMQLKA 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ Q G LVSE+P P FPRRNRIISGLS+GV+VVE L+SGSL+TAR ALEQ Sbjct: 181 QIIRQ-GCLVSEYPPGTQPHPKRFPRRNRIISGLSRGVVVVEGGLKSGSLITARMALEQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE----NSFYS 300 REVFA+PG + + S G H L+K+GA LV ++++ L +G A S Sbjct: 240 REVFAVPGAVDDERSRGVHQLLKEGATLVESAADVVQALAWGGVVPEQAKRVAVIPSGGV 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++A +GD VD + E+ + LL+LEL G I GG + Sbjct: 300 SEVLPDIPGAASVVAALGDGALTVDGLLRLCHLTPAELSSTLLQLELCGIITREMGGTLA 359 Query: 361 LRRA 364 L Sbjct: 360 LVPQ 363 >UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017886C0 Length = 391 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 109/388 (28%), Positives = 177/388 (45%), Gaps = 30/388 (7%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS 59 D + + L + + R+ + DA + GL + +A + + Sbjct: 4 DRLLLIALHESEGIGWKTINRMVLNGELHEGLLSYDAQDWRACGLPVEKANKLAKEFPIA 63 Query: 60 IES-----------SLCWLE--------QPNHHLIPADSEFYPPQLLATTDYPGALFVEG 100 +E L +E + +I A YP L ++ P L+ G Sbjct: 64 VERKRVELSNDEEVELRQVEDKVWNLTNRTKIRIITALDAVYPDMLKSSPQAPWVLYCIG 123 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 + H L + +A+VG+R + YG + + E L G+ + SG+ARGID V H+ AL+ Sbjct: 124 DPHLLSTPGIAMVGTRMPTGYGRKVASMLSEALTRAGLMVVSGMARGIDSVVHETALRSG 183 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++AVLG G++ I+P + L + + G ++SE+P L FP+RNRII+GL+ Sbjct: 184 GPTVAVLGAGIDVIYPPENRSLYEEIAAK-GLIISEYPPGTKALPGFFPQRNRIIAGLTL 242 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 G +VVEA RSGSL+TA ALE GR+VF++PGP+ +P S G LIKQGA +VTE +I+ Sbjct: 243 GTVVVEADARSGSLITADLALEAGRDVFSVPGPLTSPKSRGTLDLIKQGAKMVTEAGDII 302 Query: 281 ENLQFGLH-------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 E L + + ++ + +D + E Sbjct: 303 EEYDSWLPKGVSDTYNKERRAPRQERPDELAGLTNDERQIYHMLEQGPGSLDEMIECTRW 362 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + LL L + I +PG ++ Sbjct: 363 DFGHLHSVLLSLIIKKQITQLPGAIYKI 390 >UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales RepID=C5AYG6_METEA Length = 397 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 129/391 (32%), Positives = 172/391 (43%), Gaps = 38/391 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 WLRL+ + + + S + LT R +R + + E Sbjct: 8 RLDWLRLIRTDGIGPRTFRSLINRFGSASAALDAL---PDLTKRAGKRAVPPTKVEAERE 64 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + H + YP L AT P + V G+ L +A+VGSR S G Sbjct: 65 MVAAARLGIHFLAMGEAAYPKALHATDTAPPLIAVRGDPATLLKPSVAIVGSRNASTAGL 124 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + G+ + SGLARGID AHKA L ++AVL G + I+P HA L Sbjct: 125 AFTERLARGFGEAGLVVVSGLARGIDARAHKATLTTG--TVAVLAGGQDRIYPENHAGLV 182 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++ GGA+V+E P+ P +FPRRNRIISGLS G +VVEAA RSGSL+TAR ALEQ Sbjct: 183 EEIVGAGGAVVAEMPMGWVPRGRDFPRRNRIISGLSLGTVVVEAARRSGSLITARFALEQ 242 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA---------- 293 GREVFA+PG +P +EG + LI+QGA LV+E E +L L + Sbjct: 243 GREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLDPLIAGDAPQADGLNDRSET 302 Query: 294 -----------------------PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAER 330 P + + L+A + D +A Sbjct: 303 WRTPDYWDEIDFDGRAETTLPLLPAAAEPVEAPPEPRDDRERLIACLSPAPVGTDELARS 362 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G V V T LLELEL G I G V L Sbjct: 363 TGLSVRIVQTTLLELELDGQIERHGSGTVSL 393 >UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteobacteria RepID=Q0ANX9_MARMM Length = 387 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 131/384 (34%), Positives = 184/384 (47%), Gaps = 25/384 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WLRL L R + + + R+ +++E Sbjct: 9 TERVMWLRLARTRGLGAIGFARAIAHYGNAADAIDDLPARARSAGRRVLDI--PSPETVE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + +E+ LI YP L A P L V G L L A+VG+R S Sbjct: 67 AEMEQIERVGARLITGLDPDYPALLAAIPGPPPTLIVRGNLSLLDRPACAMVGARNASAV 126 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R+ R L + + SGLARGIDG AH AL+ +IAVL G++ I+P H Sbjct: 127 GLRFARELANGLGREDIVVVSGLARGIDGAAHSGALESG--TIAVLAGGIDHIYPPEHGE 184 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L A L E G L+SE PL P A +FPRRNR+ISGL+ G LVVEAALRSGSL+TAR A Sbjct: 185 LHARLGE-DGLLLSEVPLGQSPTARDFPRRNRLISGLALGTLVVEAALRSGSLITARYAA 243 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------QFGLHWLPD 292 EQGREV A+PG +P + G + L++ GA L+ +++L+ L GL LP Sbjct: 244 EQGREVMAVPGSPLDPRARGSNQLLRDGAHLIESVDDVLDILSKARRPEPPGHGLEDLPA 303 Query: 293 APENSFYSPDQQDVA-----------LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ ++ P L A + D +A A P+ EV Sbjct: 304 MSLPDLFDDEEAGLSTDEGLSNTSALSPLERLRALLSPAPVSGDELARAADLPIGEVQAM 363 Query: 342 LLELELAGWIAAVPGGYVRLRRAC 365 L+E+E++G IA +P G V+ RR Sbjct: 364 LMEMEMSGEIATLPDGLVQRRRQS 387 >UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 Length = 398 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 125/397 (31%), Positives = 182/397 (45%), Gaps = 38/397 (9%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + E WL+L + + + + + + +Q +R ++ + Sbjct: 4 MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQVAPAVRHKHALEAW--R 61 Query: 59 SIESSLC----------WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 + E W + L+ E +P L P LF+ G + LH Sbjct: 62 NAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKP 121 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 A+VGSR + R + F L +G+ SG+A GID AH+ AL+ G +IAV G Sbjct: 122 SAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDTAAHQGALEAEGGTIAVWG 181 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ I+P + LA + E+ G +VSEFP+ P A NFPRRNR+I+ LS+ LVVEAA Sbjct: 182 TGIDRIYPPANKNLAYEIAEK-GLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAA 240 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 L SGSL+TA A E GREV A+PG I NP S+G H LIK GA L ++IL L Sbjct: 241 LESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQ 300 Query: 289 WLPDA----------------------PENSFYSPDQQDVALPFPELLANVGDEVTPVDV 326 + P + + +L +G + DV Sbjct: 301 NTGASSYSINKDTPDTGRRTVQTAYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDV 360 Query: 327 VAERAGQPVPEVVTQLLELELAGWIAAVPGGYV-RLR 362 +A + P ++ LLELEL G +AA+PGG R+R Sbjct: 361 LAGQLAMPAADLYAALLELELDGSVAAMPGGRYQRIR 397 >UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae RepID=Q3BNK4_XANC5 Length = 381 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 133/357 (37%), Positives = 191/357 (53%), Gaps = 18/357 (5%) Query: 21 MVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPA 77 ++ S + A + G QA +++E+ L W EQP HHLI Sbjct: 24 RRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQGPDPQALEAGLRWCEQPGHHLIGW 83 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG 137 YP L + P ALFV+G + L +AVVGSR+ + G R F +LA G Sbjct: 84 CDPDYPALLRHIANPPMALFVDGAPNVLWHPGVAVVGSRSATAGGRDHTRAFASSLACAG 143 Query: 138 VTITSGLARGIDGVAHKAAL-QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 ++I SG+A G+D +AH+AAL Q +G+++AV+G G++ +P RH L + E+ GA+VSE Sbjct: 144 LSIVSGMAAGVDAIAHEAALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAER-GAVVSE 202 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 + P+A +FP RNRII+GL+ G LVVEAA+RSG+L+TAR A E GREVFALPG + N Sbjct: 203 YLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGALITARLAAEAGREVFALPGSLHN 262 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD----------- 305 P + G H LI+QGA L EP +++E L L A +P + Sbjct: 263 PLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRKRLAAPTELPSKATTSAGAGP 322 Query: 306 --VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + L +G + TP+D + +R G V + + LL +EL G + G Y R Sbjct: 323 ARSDPDYQRLWQALGHDPTPMDSLVQRTGLTVAALSSMLLIMELEGDVVTEHGRYTR 379 >UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacteria RepID=B2U799_RALPJ Length = 402 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 133/374 (35%), Positives = 193/374 (51%), Gaps = 17/374 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL + ++ I A L RQA+ L+ P + Sbjct: 26 TELAGWLRLTETPGVGPVAARQLLAAFGLPQDIFAQPYAALAKVLPERQARAVLAEPDDT 85 Query: 60 IESSLC----WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + W+ +P + + YPP+LL D P L+ +G+ L + + VVG+ Sbjct: 86 LAALIECTVAWVNEPGNAIFTLADRGYPPRLLELPDPPTLLYTKGDASLLRAAAVGVVGA 145 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + G R F + L+ VT+ SGLA GID AH+ AL G +IAV+G GL+ ++ Sbjct: 146 RSATAAGIDNARAFSQALSAASVTVVSGLALGIDAAAHEGALAGPGSTIAVVGTGLDIVY 205 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ LA + E G ++SE+PL + A NFPRRNR+ISGL++G+LVVEAA +SGSL+ Sbjct: 206 PARNRALAHRIAEA-GVIISEYPLGMGARAENFPRRNRLISGLARGLLVVEAAAQSGSLI 264 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A EQGR+VFA+PG I +P ++G H LIKQGA LV +IL+ L +G P Sbjct: 265 TARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWGRAAAPAKRA 324 Query: 296 NSFYSPDQ----------QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + LL +G + +D + ER GQ + QLL L Sbjct: 325 TRAATAQAPAGAPVTVAGPAPSASEAALLDALGFDPVDLDTLCERTGQGAAALSAQLLAL 384 Query: 346 ELAGWIAAVPGGYV 359 EL G + PGG Sbjct: 385 ELDGRVERRPGGRF 398 >UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLV8_9FIRM Length = 364 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 10/367 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI----AHWVAKQSHIDAVVLQQTGLTLRQ-AQRFLSF 55 M + + L L ++ Y + + + + ++ L + ++ + Sbjct: 1 MRNEDALLFLSYLNFDYKIKDELLNHFTLEHIEEIFDLSGDYFKENKLLTKNNIEKLVEE 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 K + ++ +LE+ + + SE YP L P ++ +G++ F L++VG Sbjct: 61 REKFNSDAYRDYLEKKKVNYVSILSENYPINLKDIEYIPQVIYYKGDILPEDEFALSIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG F +++ G+ I SG+A GID ++H+AAL+ G +IAVLG G++ Sbjct: 121 SRKCTNYGAWATEYFARSISELGIRIVSGMALGIDSISHRAALKSGGRTIAVLGCGVDIA 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + RL ++E GA++SEFP+ +PPLA+NFP RNRIISGLSK +LV+EA RSG+L Sbjct: 181 YPKTNYRLYDEIIE-NGAVMSEFPIGMPPLAHNFPVRNRIISGLSKALLVIEAQDRSGTL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T+R A EQ +E+FALPG I + S G + LIK GA++ T+ ++I++ + + Sbjct: 240 ITSRFANEQSKEIFALPGNINSLYSRGTNKLIKDGALIATDYQDIID---GVIDFSEFIL 296 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + D + + + +E + ++ G + E T L LEL G+I + Sbjct: 297 NKNKEEKDLDILDAKELLIYNLINEEPKSQNKISTITGFSIIETNTILTALELKGFIKEL 356 Query: 355 PGGYVRL 361 GG + Sbjct: 357 NGGIFVV 363 >UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus RepID=B5YFC8_DICT6 Length = 364 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 13/330 (3%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY 92 + L L Q F+ F RK +E LE+ + E +PP L + Sbjct: 40 LSESELINLFLGSSLIQEFIIFRRKFDLEREWEKLEENKVKMTTLWEEDFPPLLKEIKNA 99 Query: 93 PGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 P L +G+L + +VG+R S YG + F + L G + SGLA GID A Sbjct: 100 PLFLLYKGDLK--GDKFIGIVGTRRPSSYGIKMAEAFSKELVKYGFIVVSGLAYGIDTYA 157 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 H+ A++ G + AVLG+ L+ I+P + +LA ++E GA++SE+PL P Y FP+RN Sbjct: 158 HRGAIEGGGKTFAVLGSSLDHIYPSGNLKLAERIIE-NGAIISEYPLGTKPARYTFPQRN 216 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL 272 RIISG+ +GVLV+EA +SG+L+TA A +GR+VFA+PG + + S G + LIK GA + Sbjct: 217 RIISGICQGVLVIEAGEKSGALITASFAANEGRDVFAIPGRLTDERSVGTNKLIKDGAKM 276 Query: 273 VTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAG 332 V + +ILE + N + +L+ + E ++ + + Sbjct: 277 VVDVFDILEEYNIAYEIKKERRFN---------ITPEEKFVLSFLNSEPIFIEDLMKNLN 327 Query: 333 QPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + ++ ++ L+ G + PG + Sbjct: 328 IDLSTLMFIIISLQGKGLVEEYPGLRYARK 357 >UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus RepID=C7RDQ0_ANAPD Length = 363 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 10/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL-SFPRKSI 60 EI L L I L ++ + + + D LT + + + ++ Sbjct: 6 TKNEIILYLNYI-YLNNQTILDLYEKTSFEDFFDKDRAYYDFLTDKIYGKIFDNESLEAF 64 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHS 119 S L L + ++ + E YP LL D P L+ +G+ +A VGSR + Sbjct: 65 RSYLDLLYEKDYKYVTLLDEAYPKNLLYIEDKPAVLYYKGDFDEEADKNSIAFVGSRKCT 124 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + E++A G+T SGLA GID HKA L V +I V+G G++ I+P+++ Sbjct: 125 DYGRWACKNLAESIAMAGITTVSGLAYGIDATCHKATLDVGKRTIGVIGCGIDKIYPKQN 184 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + E+ G ++SEFPL P+A+NFPRRNRIISG+S G +V+EA +SG+++T RC Sbjct: 185 RDLYRRI-EENGLILSEFPLGTEPIAFNFPRRNRIISGISLGTVVIEAKEKSGTMITVRC 243 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQG+EVFA+PG I + S+G + +I++GA LV PE+I+E L + Sbjct: 244 ALEQGKEVFAVPGNINSIYSKGTNKMIQEGAKLVLSPEDIIEELDYMKDLDLGRR----- 298 Query: 300 SPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 S D + +++ + + + D +A + + + L LEL +I + Sbjct: 299 SLDYSKLDKTEAQVVRYIVNYPNSSADTIASGLDEEIDVINFLLTSLELKDYIENIGNNE 358 Query: 359 VRLR 362 ++ Sbjct: 359 FSIK 362 >UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B1ZNA2_OPITP Length = 382 Score = 337 bits (864), Expect = 4e-91, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 18/377 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIA-HWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 + + L L ++ ++ + R+ A ++ G+ + ++ Sbjct: 7 TERQALLVLNALPNIGPVTLNRLLAELGGDPRAALAASAKRMEAVRGVGPVISATLTNWR 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + I YP L D P L+ +G +A+VGS Sbjct: 67 EHFDLAREEERMAKSGADFITTGDAGYPKLLKEIHDPPIGLYRKGRYGF-EQPCIAIVGS 125 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + LA G + SGLARGID AH+ AL V G + AV+G G++ I+ Sbjct: 126 RRTTLYGQATAKKLGAELARLGFCVVSGLARGIDTAAHEGALSVGGKTAAVVGCGIDIIY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L + E GA++SEFP +FP RNR+++G+ + V+VVE + G+++ Sbjct: 186 PPENLALYRQI-EATGAVLSEFPFGRRADRQSFPMRNRVVAGMCEAVIVVETDVNGGAMI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A E GR +FA+PG I P S G H LI+ GA L+T +++L L + P A Sbjct: 245 TARFAGEYGRLIFAVPGRIDQPTSAGCHQLIRDGATLLTSVDDVLNELSYLGGLRPAAIP 304 Query: 296 NSFYSPDQQD---------VALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLEL 345 S D + + + D + + P+V L+ L Sbjct: 305 PKEGSADPESALGVTPSTALTPEEAAIWECFRGGAMLTPDAIIAQTRLGSPQVSAALMML 364 Query: 346 ELAGWIAAVPGGYVRLR 362 EL IA G R Sbjct: 365 ELKRLIAKRSDGAFEAR 381 >UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11V51_CYTH3 Length = 364 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFP 56 M + + + I + + + I G+ S Sbjct: 1 MQEKIYQVAVGLIPGVGAATTKTLISYCGCAEQIFKTPKGKLKNIPGIGAVTVDNIYSAS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ES + ++ + L+ YP +L D P L+ +G +A+VG+ Sbjct: 61 VLHEAESIVERAQKLDTQLLFYTDPDYPNRLKQIPDAPTLLYYKGSSALNPPKSIAIVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R E +A+ + SGLA GID AH+ AL++ +I V+ NG N I+ Sbjct: 121 RKATEYGRSVVRKLLEEIASYKPLVVSGLAYGIDIQAHRDALELGLETIGVMANGTNIIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H A +LEQGG L SE+ D FP RNRII+G++ +V+EA G+L+ Sbjct: 181 PSVHKNTALKMLEQGGLL-SEYTFDSIAEPMRFPARNRIIAGMTDATIVIEATQSGGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAP 294 TA A REV A+PG I + SEG + LIKQ A +T +++E L + + A Sbjct: 240 TAEIADSYDREVLAVPGRITDMASEGCNNLIKQNKAHALTSAADLIELLNWDITPSQQAH 299 Query: 295 ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 ++ + D+ + A + +E +D ++ ++ + ++ + LLE+E G + A Sbjct: 300 KHIILA----DLEEDELMIYAVLTDNEGIHIDELSWKSQLSMQKISSVLLEMEFKGIVKA 355 Query: 354 VPGGYVRLR 362 +PG LR Sbjct: 356 LPGKKFSLR 364 >UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0A8_THERP Length = 367 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 132/372 (35%), Positives = 188/372 (50%), Gaps = 13/372 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPR 57 M + WL ++ + + R+ L+ GL R ++ + Sbjct: 1 MDERAAWLGFHAVDGISLRQLERLIAQTGSALAAWHAPEAELRALGLPEGPLARLVAARQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E L + + +I E YPP L P ALF+ G L + +A+VG+R Sbjct: 61 AGLPEKILAQVRRVGARVIVYPDEDYPPLLREIASPPLALFLRGTLPPAEAPAVALVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + F LA GVT+ SGLARGID VAH+A L G +IAVLG G++ ++P Sbjct: 121 QASNYGIQVAATFATALAEAGVTVVSGLARGIDRVAHEATLDAGGRTIAVLGTGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + EQ GALV+EF + PP A NFP RNRIISGLS GV+V+EA RSG+L+T Sbjct: 181 PEHRALAQRIAEQ-GALVTEFLPETPPYAGNFPVRNRIISGLSLGVVVIEAPERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q R V+A+PGPI +PG+ G L++ GA V +EILE+LQ LP Sbjct: 240 ASFALDQNRSVYAVPGPIFSPGTAGILRLLRDGATPVGSAQEILEDLQLVARQLPLPAAP 299 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + ++A +G E +D +A G + ++ LLEL+L G + + Sbjct: 300 AVPERARP--------VVAALGPEPKHIDELAAELGMGIAQLSALLLELQLEGIVTHLGA 351 Query: 357 GYVRLRRACHVR 368 + L R Sbjct: 352 QHYALASPLLAR 363 >UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium difficile RepID=Q18BD7_CLOD6 Length = 369 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + +L L SI + + I + + I ++ ++L + + + Sbjct: 4 MEKRDTYLWLKSIGGITTKTIEIIENEIVNIEDIFDFSEKEIYNLKNISLNIRKNIVKYR 63 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +E+ L + I + YP L + P LF +G++ +++ +A+VG Sbjct: 64 GHAYLENIKELLYKKAIKYICKYDKEYPENLKNIYNAPKLLFYKGDIGLVNNNFNIAIVG 123 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ GV I SGLA GID +H + +IAVLG+G++ Sbjct: 124 SRKPTAYGINCAKTISCQLSQYGVNIVSGLAIGIDAYSHIGCMSGKSKTIAVLGSGVDNP 183 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+++ L+ +LE GG L+SE+ ++ Y+F RNRIISGLS GV+VVEAA++SG+L Sbjct: 184 LPKQNLHLSNKILENGGLLLSEYNINSTVAPYHFSNRNRIISGLSDGVVVVEAAIKSGAL 243 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T ALE G+ VFA+PG I + S G H +IK+GA L+ ++IL Sbjct: 244 ITVDFALEHGKNVFAIPGNINSQMSRGCHKIIKEGAKLIENIDDILNEYNIFNIIDKKIN 303 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + +++ + E +D + + G + V + + EL L + Sbjct: 304 QKY----DNISLNAKSKQIIEAIKREGNLHIDSICDYTGIEIKYVNSIINELVLNELVVE 359 Query: 354 VPGGYVRLR 362 + L Sbjct: 360 MNNKTYSLN 368 >UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB69_CARHZ Length = 358 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 120/363 (33%), Positives = 189/363 (52%), Gaps = 12/363 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPR 57 M +++ +L L S+ Y + + I L++ G + + Sbjct: 1 MQNSDYYLTLASVY--YNQKLFHLIKEGIPVEEIVVNPVKTLKEFGFSPTEINSLTRKIS 58 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + E ++ + YP +LL D P LF G L L + + +VG+R Sbjct: 59 EFNPERVKEHCSNLGIKIVTFGEKRYPERLLHLYDPPVVLFCWGNLELLKTPMVGIVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R F E +A G+T+ SGLARGIDG AH+ A+ G ++AVLG+G++ +P Sbjct: 119 RASSYGLKVARAFAEEIAGAGITVISGLARGIDGEAHRGAVSA-GATVAVLGSGIDVPYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF PL Y FP RNR+I+ L++G++VVEAAL+SGSL+T Sbjct: 178 RENENLYREII-QKGLIISEFLPGTMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALE GREVFA+PG I +P S G + L+K GA + + E++E L FG + Sbjct: 237 ARIALELGREVFAVPGMITSPLSAGSNLLLKDGARIALKGTEVIEELGFGTLFSNSFAAQ 296 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 +Q+ ++L + +E V+ +A R V EV+ ++ LE+ G++ G Sbjct: 297 ----RSKQEAFGLAGKILEVLVNEDLTVEEIAYRLNARVSEVLREISFLEIKGFVKKQFG 352 Query: 357 GYV 359 G Sbjct: 353 GKF 355 >UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2Y2_PAESJ Length = 371 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 108/357 (30%), Positives = 169/357 (47%), Gaps = 6/357 (1%) Query: 8 LRLMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK---SIES 62 + L S + + + G QA+ + ES Sbjct: 13 IMLHECSGIGWHTVQKAVAHKAWENVDGKSEADWMAIGFGRAQAEAAARRWNEPYDWPES 72 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 ++ +I E YP +L P L+ G++ L +A+VG+R S YG Sbjct: 73 PYLRAQKLGAAVITPYDEEYPEELHRIPQPPWVLYALGKVELLKRPSIAIVGTRNPSAYG 132 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 E L+ RG+T+ SGLARGID AH+AAL+ +G +IAVL + ++ +P + L Sbjct: 133 RHTALSLSEELSRRGLTVVSGLARGIDSKAHEAALRGHGSTIAVLASPVDHCYPPENRSL 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ + G ++SE P+ FP RNR+I+GLS G +VVEAA SGSL+TA ALE Sbjct: 193 YQQIV-REGLILSESPVGSSLHPGMFPLRNRVIAGLSLGTIVVEAAKGSGSLITADQALE 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 GR+VFA+PGPI +P SEGP+ LI++GA LV+ + ILE + L + S Sbjct: 252 MGRDVFAVPGPISSPKSEGPNSLIREGAKLVSSADHILEEYSWLEGKLAALTKPKPASAV 311 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ +++ + D ++ + + P + L+ L + I PG Sbjct: 312 AASMSAEEQKIIDLLRDRPLTINELHQLTMIPFGHLSALLINLCIKRKIEQQPGAVY 368 >UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Porphyromonas gingivalis RepID=Q7MXB1_PORGI Length = 374 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 160/362 (44%), Gaps = 13/362 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-----KSIES 62 + L + + ++ + I + + + +R L + Sbjct: 17 IALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSVMEEARR 76 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + ++ + YP +L D P L+ +G + L++VG+R + YG Sbjct: 77 KLDQALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTRNITAYG 136 Query: 123 ERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 LA + I SGLA G+D AHKAAL ++AVL +GL+ I+P H Sbjct: 137 RTATERIVSGLAETIPDLLIVSGLAYGVDVAAHKAALDNGLPTVAVLAHGLDRIYPSGHR 196 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +A +L GG L +++P+ P +NF RNRI++GLS LV+E+A + GSL+TA A Sbjct: 197 SIAMEMLRNGGLL-TDYPMGTEPERFNFVGRNRIVAGLSDATLVIESAEKGGSLITAGLA 255 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFY 299 REV ALPG + S G + LI+ A LV+ +++L L + +F Sbjct: 256 FGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKPQTLNFR 315 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 D + + VD + G P+ +V QL +LEL G + + PGG Sbjct: 316 PDSWPDTPVAEC----LLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQSQPGGIY 371 Query: 360 RL 361 + Sbjct: 372 SV 373 >UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rhodobacterales RepID=Q1GE46_SILST Length = 382 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 176/369 (47%), Gaps = 12/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ + R+ ++ + + + + + + + +++ Sbjct: 19 DQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKI--YSKDALD 76 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + N L+ YP L + + P AL+ G L + +A+VG+R S Sbjct: 77 AEFENAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSL 136 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGID AH+ AL +IAV G G++ I+P + Sbjct: 137 GRRMAYGLARDLGDAGYVVVSGLARGIDACAHEGALASG--TIAVQGGGVDIIYPSENTP 194 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA +L EQ G +SE P+ + P A +FP RNRII+GL+ +VVEAA++SGSL+TAR AL Sbjct: 195 LAMTLAEQ-GLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAAIKSGSLITARDAL 253 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + + G + LI+ GA LV E+++E L P + P Sbjct: 254 DLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLP 313 Query: 302 DQQDVALPF-------PELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++L + TP + + G P +V T L +LEL+G I Sbjct: 314 SPPPERRNLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGRE 373 Query: 355 PGGYVRLRR 363 PGG + +R Sbjct: 374 PGGVIIKKR 382 >UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Rickettsiales RepID=Q5FFF2_EHRRG Length = 375 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 11/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-KSI 60 + LRL+ + + +++ L + + + + ++ Sbjct: 10 QELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEA-LPELIKKSKAYDKINTICSIETA 68 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + + +I E YP L DYP L G++ L +A+VGSR S Sbjct: 69 EQEIENTYKIGGRIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSI 128 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G+ + LA G TI SGLA+GID AH + + +IA++GNG+N ++P + Sbjct: 129 NGKNFAYKLSYELANSGFTIVSGLAKGIDKSAH-SIIFKQLPTIAIMGNGINIVYPEENT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + GG + +EFP P A FP+RNRIISGLS GV++VEA+++SGSL+TA A Sbjct: 188 TLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGSLITANFA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL-----QFGLHWLPDAP 294 + Q REVFA+PG + +G ++LIK G A L+ +I+E+L + H L D Sbjct: 248 IHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNI 307 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ S + D A +L ++ ++ + + + L+ELE + I + Sbjct: 308 ITNYQSTTEIDNAKNL--ILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERL 365 Query: 355 PGGYVRL 361 P V L Sbjct: 366 PNNKVML 372 >UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydrogenibium RepID=C1DXS3_SULAA Length = 356 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 16/366 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-- 56 M + L L I L + ++ + + + A+ + Sbjct: 1 MEEILSCLELYFIKGLGNVSIKKLIEHYSTATSVLNADFNDLKENFGENIAKLITNRDTS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E+ ++P + YP L D P ++++G + + +AVVGS Sbjct: 61 LKEKALKEYEKAEKLGVKIVPLSYQDYPFLLKNIPDPPPVIYIKG-IFPIPENTVAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS YG LA GV I SG+A GID +AHK AL+ + AVLG+G++ ++ Sbjct: 120 RKHSSYGVYVVNSIVRELAKSGVNIVSGMALGIDTIAHKVALEEGSFTTAVLGSGIDVVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L + E G ++SEFP+ P +Y FP+RNR I+GLS GV ++EA +SGSL+ Sbjct: 180 PFENRKLYDKITE-NGCVISEFPIGTKPSSYTFPQRNRSIAGLSYGVFIIEAPDKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA E GR VF +P I ++G + LIK+GAI +TE +++ E L F + Sbjct: 239 TANYGNEYGRLVFTVPANINLSTAKGNNSLIKEGAIAITEFKDLKEFLPFL--------K 290 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +S D+ E+L + + D + E+ P++ + L L+L I + Sbjct: 291 SSVNIDYLSDLTEQEKEVLMFLDSK-KYYDEILEKFSNKYPDIDSILFNLQLKNLIQSDS 349 Query: 356 GGYVRL 361 Y R+ Sbjct: 350 MFYYRV 355 >UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR3_UNCTG Length = 364 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 15/371 (4%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF 55 M + E+ +L+S + + R+ I + G+ A + Sbjct: 1 MNERELSLFKLLSATDIGAIRFFRLLDKFGDTELILKASKRDLMSVEGIGQAIADTIFNS 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 E L + N + + YP L D P L+++G + +++VG Sbjct: 61 SDSGKAEKELETAIKNNIKITFYYNSDYPKPLRDFADKPLILYIKGNILEKDFDSISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S YG+ F A +G+TI SGLARG+D AH AL+ +IAVLGNGL Sbjct: 121 SRRISNYGKTVTSEFASYFAKKGITIVSGLARGVDSQAHITALENKSRTIAVLGNGLLVN 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P +A+L + Q GA++SE L P FPRRNRII+G S+ L+ EAAL+SG+L Sbjct: 181 YPPENAKLQEKI-SQCGAVISELQLRKQPDRGTFPRRNRIIAGFSRATLLTEAALKSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR E G++VFA+PG I + S+G + LI+ GA + P ++ + L++ + Sbjct: 240 ITARFCAEYGKDVFAVPGSIYSSISKGTNELIQNGAFIALGPHDMADQLKW------TSK 293 Query: 295 ENSFYSPDQQDVALPFPELLANV--GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + E+L+ + P D++A++ + E LL+LE+ G I Sbjct: 294 DKISKTNKLPSLDKLELEVLSLIENDSAGLPPDLIAQKLNIGISETAPVLLKLEINGLIK 353 Query: 353 AVPGGYVRLRR 363 PG Sbjct: 354 TTPGQIYVRAY 364 >UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding protein n=4 Tax=Gammaproteobacteria RepID=C2LEB7_PROMI Length = 385 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 147/385 (38%), Positives = 221/385 (57%), Gaps = 25/385 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIW+RL +S L + +++ ++ + ++ VL + GL+ +Q+ +F+ + Sbjct: 1 MDAREIWIRLNVVSRLPVNKAIKVVEYLQSLTQLNRKVLLECGLSEQQSHQFMRLQANCV 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +S+L WL++ L+ YP L + P LFV G L S Q+A++GSR + Sbjct: 61 KSTLKWLDKNESSLLTISDSDYPLLLKQISSPPLLLFVAGNKEHLKSTQIALIGSRDATQ 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG +W F + L TITSGLA+GIDGV H++AL+ +GV+IAVLG+GL I+P H Sbjct: 121 YGTKWATYFAQQLVKNKFTITSGLAQGIDGVGHRSALKHHGVTIAVLGSGLEQIYPSFHR 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLA + E G LVSE PPLA +FP+RNRIISGLS +L+VEA ++SGSL+TA A Sbjct: 181 RLAEQIKES-GVLVSEHLPMAPPLARHFPQRNRIISGLSSALLIVEAGIKSGSLITANYA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---------- 290 L+QG+E+F LPG +G+ EG H L+KQGA L + P++I+E L WL Sbjct: 240 LQQGKELFVLPGLLGDSHFEGNHQLLKQGANLASSPDDIMEYLNSSWQWLIFNHNDDLQD 299 Query: 291 ---------PDAPENSFYSPDQQDVALPFPE----LLANVG-DEVTPVDVVAERAGQPVP 336 + E+S + + + + +L +G D+ P+D++A ++G Sbjct: 300 EHIAEVGSAANKKESSNMPLEIEKLTPTQQQSINLILPLLGFDKAIPIDIIANKSGLSTS 359 Query: 337 EVVTQLLELELAGWIAAVPGGYVRL 361 ++ LLELEL +A V GGY+RL Sbjct: 360 DLAPLLLELELIEKVAIVAGGYIRL 384 >UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BIU6_9BACT Length = 365 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 13/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E L L S+ + + R+ I Q G+ + S+ Sbjct: 1 MNRLEACLLLESLPGMGWNRAQRMVTHFGSPEAIFLAKHQDWESVEGIGEKGCNALKSWK 60 Query: 57 R--KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + S E ++ + + YP L D P LF +G L F +++VG Sbjct: 61 KGLLSAEKKAREIKTLGIQCLFFGTPEYPLALSFCADAPLVLFYKGTLSFQDRFIVSIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R ++ +G + TLA I SGLARGID +AH+AAL+ N ++A L + + I Sbjct: 121 TRQNTPHGRAFCEELIHTLAPFNPIICSGLARGIDIIAHRAALKANLDTVACLAHSFDRI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A+ + E+ GALV++F NFPRRNR+I+G++ +V+E+A++ GS+ Sbjct: 181 YPYEHHKTASEI-EKKGALVTDFLPGAVFNRANFPRRNRLIAGMAHATVVIESAVKGGSM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 TA A + GRE+FA+PG + S G H L+ +Q A L+T+P+EI+ L + + A Sbjct: 240 NTADLAHQYGRELFAVPGRPSDLKSGGCHQLLFQQKAQLLTDPQEIVNTLGWNKQVVTKA 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + D+ +L E +D +A G V + L+++E+ G + Sbjct: 300 IQKPLFV----DLTEEERQLFTQFSKEGKIHLDHLAFSVGIKVSTTASLLMQMEMKGMVR 355 Query: 353 AVPGGYV 359 A+PG Y Sbjct: 356 ALPGKYF 362 >UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandensis MED297 RepID=A4BK91_9GAMM Length = 368 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 196/367 (53%), Gaps = 14/367 (3%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTLRQAQRFLSFP-- 56 M+ E+ WLR + I +L ++ + + + + ++R R ++ Sbjct: 1 MLSDELAWLRWVLIPNLGLKRSHQLLNLIDSPQALFLTPDRWPLPESVRATIREMNLLGE 60 Query: 57 ----RKSIESSLCWLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + L W +Q + HHL+ D P L D P L+V+GE L+ Q+ Sbjct: 61 QHPVHRRALEQLSWRDQHDSHHLLFPDHPDMPTSLSELYDAPLVLWVKGERSVLNQTQVG 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VGSR S R R + L+ G+ +TSG A+GID H A + +G ++AVLG G+ Sbjct: 121 LVGSRHASPNALRHARTLSQHLSAAGLVVTSGGAKGIDTACHTAVVSRHGATVAVLGCGI 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P+ + +L + + G LVSE+PL P +FPRRNR+IS LS V V+EA+ +S Sbjct: 181 DVIYPKNNRQLFEDI-ARDGCLVSEYPLGTTPRPGHFPRRNRLISALSTVVGVIEASPKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TA ALEQGR+VFA+PG IGNP S G H LI++GA L+ ++IL++L + Sbjct: 240 GSLITAMHALEQGRDVFAMPGDIGNPNSAGCHQLIQEGASLLCSADDILKHLDWR----N 295 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + +S +D+ +L + + P+D++A P +++ +LELEL G I Sbjct: 296 SSAPSSSSRLTLEDLTPVQHSILETLSSDQHPLDMLAYHLQVPAHQLLEPVLELELRGLI 355 Query: 352 AAVPGGY 358 PGGY Sbjct: 356 EQQPGGY 362 >UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=Alphaproteobacteria RepID=Q135I2_RHOPS Length = 422 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 172/360 (47%), Gaps = 8/360 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL+ ++ + + L + A+ + Sbjct: 65 WLRLIRADNVGPRTFRSLVNHFGSARAALE-RLPELARRGGAARAGRIPSEDEARREIDG 123 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL---HSFQLAVVGSRAHSWYGE 123 + L+ YPP+L D P L V AL +A+VGSR S G Sbjct: 124 GHRLGVELVAPGEPGYPPRLALIDDAPPLLGVHCVPDALAEMQRPMIAIVGSRNASGAGL 183 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 ++ L G + SGLARG+D AH+A+L ++AVL G + I+P H L Sbjct: 184 KFASELARDLGAAGFVVISGLARGVDQAAHRASLANG--TVAVLAGGHDKIYPPEHEDLL 241 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++E GA +SE PL P +FPRRNR+ISG + GV V+EAA RSGSL+TAR A +Q Sbjct: 242 LDIVEARGAAISEMPLGHVPRGKDFPRRNRLISGAAVGVAVIEAAYRSGSLITARRAADQ 301 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP--ENSFYSP 301 GREVFA+PG +P + G + LIKQGA L+T ++I++ + + + P E +P Sbjct: 302 GREVFAVPGSPLDPRAAGTNDLIKQGATLITSADDIIQAVAPIMDRPVELPGREPEHPAP 361 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + A ++ +G +D + +G P V T LLELELAG + GG V L Sbjct: 362 ASEPDASHRGRIVNLLGPSPIGIDDLIRLSGIPPAVVRTVLLELELAGRLDRHGGGLVSL 421 >UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L5_9FIRM Length = 333 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 7/319 (2%) Query: 43 GLTLRQAQRFLSFPRKSIES-SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE 101 + ++ + K + + LE+ ++ + YP +LL P LF +G Sbjct: 19 KINNKRGSEYKEQLEKLKDKNYIKELEKQGIKVVSVNDRDYPAKLLPYDHRPEYLFYKGR 78 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L +A+VG+RA S YG + R L+ GV I SG+ARGID + AL+ Sbjct: 79 LPDRDKPVVAMVGARACSNYGRKMARALARELSENGVQIISGMARGIDTYSQIGALEGGT 138 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 + AVLG+G++ +P + L +L+ GG ++SE+P P+A++F RNRIISGLS Sbjct: 139 PTFAVLGSGVDVCYPTENIELYNDILKNGG-IISEYPPGAGPIAWHFLLRNRIISGLSDK 197 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 V+VVEA +SGSL+T ALEQG++V A+PG +G S+G + LI+ GA ++T ++L Sbjct: 198 VIVVEAREKSGSLITVEWALEQGKDVMAVPGRVGEKLSDGCNCLIRAGAGIITGANDVLN 257 Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 ++Q+ + + ++ + L + + + + + G E+ Sbjct: 258 DIQYSGSKNENEKKQK-----EKSLEKDLALLYSGLRLQPKNIYELMNETGFKYEELTGM 312 Query: 342 LLELELAGWIAAVPGGYVR 360 LL+L+L G + Y Sbjct: 313 LLKLQLMGLVEQPSENYYS 331 >UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga lettingae TMO RepID=A8F3X8_THELT Length = 339 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 167/360 (46%), Gaps = 25/360 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EI L +++ +I S I Q + + I Sbjct: 1 MHPIEI-FALSYFGKFSIEEIQKIKETYNSVSEILKSDFFQGNERFK-----AHYDEGFI 54 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHS 119 + L +E N L+ SE YP L T P LF G + L +AVVG+R + Sbjct: 55 QQQLKKIENFNVKLVDFWSEDYPELLKWTHSPPAVLFCLGNIQFLKDSRTVAVVGTRKAT 114 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + L+ G SG+A GID AH AL V G ++AVLG G++ +P + Sbjct: 115 GYGIDVTKKMVTDLSRAGFVTVSGMAFGIDSSAHSTALNVGGKTVAVLGTGVDVCYPVSN 174 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + +L + G LVSE+PL NFP RNRII+GL + +VVEA L SG+L+TA+ Sbjct: 175 KDIYEVIL-KNGCLVSEYPLGTKAAKQNFPARNRIIAGLCRATVVVEAPLNSGALITAKI 233 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A E GR+VF++PG I SEG +WLIK GA +T ++I E Sbjct: 234 AAEIGRDVFSVPGDIDRKTSEGCNWLIKMGATPLTHVDQIFEYYGVEFK----------- 282 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +++++ F ++ + VAER + EV+++L E EL G I+ G+ Sbjct: 283 ---KEELSDNF---ISLFDSGPLLAEEVAERLKMDLSEVLSKLTEYELRGMISKTQSGHY 336 >UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2C9_9BACE Length = 408 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 105/400 (26%), Positives = 164/400 (41%), Gaps = 42/400 (10%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + W+ L + + R+ ++ GLT Q + L Sbjct: 1 MAALKYWIWLTTRRGMTPLQTFRLLDHFGTPEAAYFADRKEYRLCGLTDWQQRTLLDKSL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL-HALHSFQLAVVGSR 116 E L ++ ++ YP +L + P L+V+G+L + VVG+R Sbjct: 61 DGAERILGDCDRLGIRILTIQDAEYPERLRQIENPPCVLYVKGKLFPFDELVTVGVVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G + SG+ARG+D A + AL+ G ++VLG G++ ++P Sbjct: 121 RPTEYGKIMAGRLGMELARGGALVVSGIARGLDAAALRGALKGGGSVVSVLGGGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + GAL+SE+P +FP RNRIISGLS GV VEA SG+L+T Sbjct: 181 AENRWLYEDVAAA-GALISEYPPGTENKGEHFPIRNRIISGLSLGVAAVEAEEHSGTLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPE 295 R AL+QGR+ FA+PG P S G + LI++G A LV +IL + L PE Sbjct: 240 MRLALDQGRDAFAVPGNADAPMSRGTNLLIQRGEAKLVLSGWDILCEYEQLLPGRVSRPE 299 Query: 296 N----------------------------SFYSPDQQD--------VALPFPELLANVGD 319 + PD+ + ++L + Sbjct: 300 PLPVQVEAARLEVPEPPQEPERQETVTAETVDKPDEMAYITLEDGALTDDERDILLALEG 359 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 D + E P V + L L++ G++ G Sbjct: 360 RGLRTDDLVELTQIPARRVSSALTMLQIHGYVEEKAGRRF 399 >UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Comamonadaceae RepID=Q21RP2_RHOFD Length = 409 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 128/406 (31%), Positives = 192/406 (47%), Gaps = 46/406 (11%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP 56 M E+ WLRL S + + ++ + + ++ RQA + P Sbjct: 1 MERDELAAWLRLTLSSGVGNEAARKLLVAFGLPAKVFEQSSSTLQQVVSARQATALRAEP 60 Query: 57 RKSI---ESSLCWLEQPNH-----HLIPADSEFYPPQLLATTDYPGALFVEG-------- 100 + E + WL ++ YP LL D P L++ G Sbjct: 61 PELAPLLEQTWAWLRDTGVGSGRRQIVVLGDANYPQSLLNIEDPPLMLYLLGAGEFMSNQ 120 Query: 101 -----------------ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 +L + +AVVGSR + G R F + L G+T+ SG Sbjct: 121 AVATANKGQAATTSVVNKLALRLANSIAVVGSRNPTPQGAVNARQFAKALGLAGLTVVSG 180 Query: 144 LARGIDGVAHKAALQVNGV------SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 LA G+DG AH+ AL ++AV+G GL+ ++P+RH LA + Q G L+SE+ Sbjct: 181 LALGVDGAAHEGALDSLAPGSDRLATVAVVGTGLDRVYPKRHLALAHRI-AQNGLLISEY 239 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 PL PPL NFP+RNR+I+GL++ LV+EAAL+SGSL+TAR + EQG++VFA+PG I + Sbjct: 240 PLGTPPLPANFPKRNRLIAGLAQATLVIEAALKSGSLITARLSAEQGKDVFAIPGSIHST 299 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQF--GLHWLPDAPENSFYSPDQQDVALPFPELLA 315 + G H LIKQGA LV +++LE ++ GL D+ S LL Sbjct: 300 QARGCHALIKQGAKLVESAQDVLEEMRIDSGLTHALDSIAVDACSTGATGSFGTQAVLLD 359 Query: 316 NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +G + +D + R G + QL+ LEL G + +PGG + Sbjct: 360 AIGFDPVGLDALQARCGIDTAGLQAQLMTLELDGLLVRLPGGLFQR 405 >UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDM2_9FIRM Length = 359 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 179/365 (49%), Gaps = 10/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS-FPR 57 M + W S+ + +I V + + + L RQ + FL Sbjct: 1 MNEKLSWFWFTSLLEINRKTQGKILSAVLHPEELRKLNEETAKSFLNKRQYRLFLETRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I L++ I YP +L DYP +F +G +A+VG+R+ Sbjct: 61 SYICKKYEELKKQKTDYIIWKEPDYPQRLKQIYDYPFGIFRKGRPRE-SRLVIAMVGARS 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F + L+ RGV I SG+ARGIDG +H+ AL + VLG G++ I+P+ Sbjct: 120 CTLYGREMAGYFAKELSGRGVLIVSGMARGIDGASHRGALDAGAPTAGVLGCGIDRIYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H +L A +E+ G + SE+ V P ++ FP+RNRIISGLS G+ VVEA +SGSL+TA Sbjct: 180 VHQKLFAD-VEKQGVIYSEYGPGVEPFSFLFPQRNRIISGLSDGIFVVEAREKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C LEQ +E+FALPG + + S G H LI+QGA LV+ PE+IL + + + Sbjct: 239 DCGLEQNKEIFALPGNVTSDVSRGCHRLIQQGAKLVSGPEDILNEFPKFRVFSHNVCQF- 297 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 D+ +A + + E ++ +A A PV E VT L L+ G + Sbjct: 298 ----DKNSLARGEKMVYDVLSLEPKCLEQIASEARLPVTETVTSLYYLKRQGLAEEILKN 353 Query: 358 YVRLR 362 Y ++ Sbjct: 354 YYIIK 358 >UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZD8_DESAD Length = 402 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 123/397 (30%), Positives = 170/397 (42%), Gaps = 37/397 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH--IDAVVLQQTGLTLRQAQRFL--SFPR 57 + L L L I DAV L ++ + R Sbjct: 6 EEYFACLALRYTPGLGPKSWGPILRHYPTAYDGLKDAVNWHSLKLASEKSSKAAQNEEWR 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++P +P L D P L+ G+ L + + +VGSR Sbjct: 66 PKAEKEYREAMRLEFGILPWTHPLFPDLLKELADPPTCLYYFGDPKLLSNPSVGIVGSRN 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI-HP 176 G + L+ G+TITSG A+GID AH+AAL G +IAVLG GL+ +P Sbjct: 126 SGRLGMEYASRLAADLSKSGLTITSGFAKGIDSCAHEAALHGVGSTIAVLGTGLDVDSYP 185 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 L +LE G ++SEFP P A NFP RNR+ISGLS GV+VVEA + SGSLVT Sbjct: 186 PDSDWLRRRVLES-GLIISEFPPGTKPFARNFPFRNRLISGLSIGVVVVEAEIASGSLVT 244 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR A EQGREV A+PGP G+ G LIK+GA LV +++L N++ L Sbjct: 245 ARLAGEQGREVMAMPGPSGDKSFAGCLKLIKEGAALVETADDVLMNIRHALDIEDISGQK 304 Query: 289 ----------------------WLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVD 325 P E + + D + P ++ + +D Sbjct: 305 SVAGAERKLPVKRDDKSSSPKAEDPAKNEPAVPAFDIDSLEPPEYDIAKALKSGGKLHID 364 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +A AG V +L +E+ G + PG Y LR Sbjct: 365 EIARAAGFDVSVAGAVILGMEVNGMVVRFPGMYYDLR 401 >UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373C7 Length = 422 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 108/422 (25%), Positives = 167/422 (39%), Gaps = 59/422 (13%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M +T+ W+ L + + ++ LT + +R S P Sbjct: 1 MDETKYWMWLSMVFGTGSRRIWEAMCLFTSAQEAFEMLTDGSVVLKLTENEWERLRSTPL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSR 116 + + +I + YP QL + P L+ +G + L + + VG+R Sbjct: 61 SAAAKFVEKCRNDGVEVIGYSDKLYPSQLRHLFNPPAILYYKGNISCLTGTKTITTVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + S YG R C LA + I SG A GID H AA + V+G G++ +P Sbjct: 121 SASDYGMRAAETICSELAAKNFVIVSGFAVGIDIATHMAAAGRKRPTACVMGCGVDVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + + +L+ GG +SEFP P NFP RNRI++GL + LV EA+++SGSL+T Sbjct: 181 KPNQQFREKILQCGGVFISEFPPGTQPHPQNFPSRNRILAGLGRAALVFEASVKSGSLIT 240 Query: 237 ARCALEQGREVFALPGP-IGNPGSEGPHWLIKQGAILVTEPEEILENLQFG--------- 286 AR A EQGR+V LP P I + G L++ GA EEILE + G Sbjct: 241 ARLACEQGRDVLVLPPPDIFSSRYSGNIQLLRDGAEPFYGAEEILELYKLGSPVEEEIRD 300 Query: 287 -----------------------------------------LHWLPDAPEN----SFYSP 301 +P PE Sbjct: 301 SIEAEYTGREAGIVWAGRTDIEADENEELPVKKTRKRPKKAKEEIPSVPEENRVADADDT 360 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 D ++ ++ + D D + R E++T+L ELE+ G + ++PG L Sbjct: 361 DNDELTDIQQRIVTELRDGSLHADEICRRLDIDSAELMTELTELEIVGAVRSLPGKMYEL 420 Query: 362 RR 363 R Sbjct: 421 YR 422 >UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I69_CLOAB Length = 354 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 16/367 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M D ++W +L + + I Q++ F + I Sbjct: 1 MYDNDLWFA---TINLPYRQKLELLRIYKTSDEILYNFK-----NSELIQKY-KFDIEKI 51 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAH 118 +++ ++ + + YP L D P LF G + L+ +A+VGSR Sbjct: 52 NYIKDEMKKSGMKIVFWNDDDYPKVLKNYDDMPYGLFYMGNIKKLNELNYNVAIVGSRRC 111 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG+ + ++ G+ I SG+ARGID AHK L+ NG + AVLG G + I+P+ Sbjct: 112 TQYGKDITTIISREISINGIGIISGMARGIDTYAHKICLENNGYTCAVLGCGADVIYPKE 171 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ + G ++S++ + PL YNFP RN+IISGLS VLV EA ++SGS++TA Sbjct: 172 NKNLYCQII-RNGCIISQYKPNTKPLPYNFPIRNKIISGLSNLVLVTEADIKSGSIITAS 230 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V A+PG + + S G + LI+ GA ++ + +++ L F NS Sbjct: 231 SALEQGKDVGAVPGSVFSKMSRGTNKLIQDGAHVIKDIDDVFGILNFQKINFKKIRNNSS 290 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 YS + ++ V D+ VD + + E+ L E++L I + G Y Sbjct: 291 YSS----MPENQRQIYDLVSDKPIHVDDIKRCLNIDIQELYELLFEMQLKNKILCLSGSY 346 Query: 359 VRLRRAC 365 C Sbjct: 347 YVRVNDC 353 >UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q1F9_9GAMM Length = 409 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 132/394 (33%), Positives = 187/394 (47%), Gaps = 38/394 (9%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKS----- 59 L L + +L ++ Q GL +RF F S Sbjct: 16 LLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQF 75 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + +L L Q + ++ + YP QL D P L +G L AL QLA+VGSR S Sbjct: 76 LHDTLLELSQGQYGVVFDNDPLYPTQLKNIYDPPPLLLYQGNLSALSQPQLAIVGSRKPS 135 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNGLNTI 174 + E+ + LA G+ ITSG+A GID AH AL G +IAVLGNG+ Sbjct: 136 PHAEKIAFDMAQYLAHEGLWITSGMAEGIDKQAHLGALSLQMTATQGGTIAVLGNGIKHC 195 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ HA L A ++ GG ++SE D+P Y+FPRRNR+++GLS LVVEAA +SGSL Sbjct: 196 YPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLSLATLVVEAAAKSGSL 255 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQG++VFA+P I N ++G H LI++GA LV P +ILE+L + A Sbjct: 256 ITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPIVKAT 315 Query: 295 E-------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 E +P DVA LL + +D + + Sbjct: 316 EVETAPIVAQAVSNSPQLPSESAQNTQPHQAPLAMDVAPHLQTLLNQLDWVGQDLDSLVD 375 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + + ++ L+ELEL G + G Y+R R Sbjct: 376 KTRTDIATLMGWLIELELMGLVMQRGGLYMRCRP 409 >UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 Tax=Alcanivorax RepID=Q0VTD9_ALCBS Length = 353 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 132/355 (37%), Positives = 182/355 (51%), Gaps = 13/355 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L ++ S + R S + L L++ L ++++ L Sbjct: 8 LLLQALFSPSSAALGRALKQHRSVSAAASDFLPLLPAGLKERASLLD-NTGNLQAYYEQL 66 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 I E YPP L D PG + V G + AL+S LA+VG+R S G R Sbjct: 67 SGQGWRWIAFGDEDYPPLLAQIHDPPGVIAVRGNVEALNSPALAIVGARNASADGLDNSR 126 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F LA G I SGLA GID AH+ A+ G S+AV+GNG + I+P R+ LA ++ Sbjct: 127 RFARKLAASGFVIASGLALGIDAAAHRGAVSA-GRSVAVMGNGPDRIYPPRNGSLAEEIV 185 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 + GGALVSEF PL FP RNR+ISGLS +VVEAA++SGSL+TAR AL Q REV Sbjct: 186 DTGGALVSEFAPGARPLPAQFPMRNRVISGLSLATIVVEAAIKSGSLITARTALAQNREV 245 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 FA+PG I NP S+G H L++ GA + ++I + + S + + Sbjct: 246 FAIPGSIHNPLSKGCHQLLRDGASWLESVDDIFQAFG-----------DFQRSVEAAGIH 294 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 P LL + V +D + ER G PV + QL +LEL GW+ V GGY++ + Sbjct: 295 CEAPALLTQLTSGVNSLDALQERTGLPVAALAGQLADLELEGWVERVAGGYLKRQ 349 >UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finegoldia magna RepID=C2HGN6_PEPMA Length = 356 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 9/338 (2%) Query: 24 IAHWVAKQSHI-DAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEF 81 I I + + + + L +K I L + + Sbjct: 22 IIENYDTLDDIIYDNAKKLLEVDSKIYEFILKNMKKFDINLYKEKLWKNSIKFTTYGDSK 81 Query: 82 YPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTIT 141 YP +LL D P L+ +G L+ ++ VG+R S YG + F ++ + + Sbjct: 82 YPKKLLEIDDAPYTLYYKGNLNEDFDNCVSFVGARKCSQYGSYACKKFVSEISQYKIPVV 141 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL-EQGGALVSEFPLD 200 SGLA GID ++H+ +L+ N +I VLG G++ ++PR + R+ ++ G ++SE+P Sbjct: 142 SGLALGIDKISHQTSLENNNKTIGVLGCGIDQVYPRSNYRVFQDMISSHNGVIMSEYPFG 201 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 + PL YNFP RNRIISGLS +V+EA +SG+L+T+ AL QGRE+FA+PG I + S Sbjct: 202 IAPLPYNFPFRNRIISGLSLATVVIEAKEKSGTLITSSYALSQGREIFAVPGNINSVYST 261 Query: 261 GPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 G + LIK GA ++T+ +I+ + + + P+ SF D+ ++ + Sbjct: 262 GTNQLIKDGAYILTDVLDIITQIPEFQNKYIEKPQLSF------DLNELERKIFNLLKIC 315 Query: 321 VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D ++ + + + +V+ L ++EL G + + Y Sbjct: 316 ANSPDEISIKLNEDISDVLMSLTKMELLGIVVDIGSKY 353 >UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2Y9_9SPHI Length = 376 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 9/365 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK--- 58 + ++ L S + + I + + + T + ++ LS + Sbjct: 10 EELRYFIALWSAPKIGPGILKAIIAYSGSAKRFFEIPKGRAAKTPKVGEKLLSIRNQEKS 69 Query: 59 ---SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + L E + ++ + +P + A D P F +G+ + +VG+ Sbjct: 70 LLQKADDLLELCESKGYRILTSLHPDFPKRFKAQEDSPSLFFCQGKADFNAERTVGIVGT 129 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+ R E L+ TI SGLA GID AH+AALQ N ++A++G+ + I+ Sbjct: 130 RSATAYGKAATRKIIEDLSVYQPTIISGLAYGIDIEAHRAALQENLPTVAIMGSPIGQIY 189 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + A S+L G L+SE+P NFP RNRII+GLS ++VVEAA + G+L+ Sbjct: 190 PSVHRKTAESMLLNKGGLISEYPPGGKMAPGNFPARNRIIAGLSDALIVVEAAEKGGALI 249 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 TA A ++VFA+PG + +P SEG + LIK+ A + T P +I E L + A Sbjct: 250 TAEIAYSYDKDVFAVPGNLQSPFSEGCNHLIKKMKANIYTGPNDIAEALFWTKPGEVKAS 309 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + ++L + +D ++ + P+ ++ ++LL LE G + ++ Sbjct: 310 KPKLDFSSRDAEEVKILKILQ--ENGEAGIDEISFQTEIPIGQLSSKLLALEFEGIVKSL 367 Query: 355 PGGYV 359 PG Sbjct: 368 PGKKY 372 >UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD3_ALIAD Length = 366 Score = 326 bits (837), Expect = 6e-88, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 168/371 (45%), Gaps = 20/371 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M D E+ + L + R+ + G+ QA R ++ Sbjct: 1 MGDAELAIVWSLCPGLAPSTLRRLVRAFGGIRPFHEARVADWTAYGGVDAAQASRMDAWR 60 Query: 57 RKS--IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAV 112 R + LE ++ +E YP +L D P +FV+G L + Sbjct: 61 RAEPSADRLKLQLEHRGIFVLARGAEDYPSRLSDLPDPPMVVFVQGRKDLLAPQRATFGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG R +A R I SGLA G+D AH A L++ G ++AVLG G++ Sbjct: 121 VGTRRMTSYGMEAARWIAGEIARRDAVIVSGLAMGVDATAHAATLEMGGDTVAVLGCGID 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P + RL + G LVSE+P P ++FP RNR+I+ LS+ V+VV+A RSG Sbjct: 181 RCYPPSNRRLYDQIAST-GTLVSEYPPGTPVRKHHFPERNRLIAALSEAVIVVQAGDRSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA+CAL+ GR+V+A+PGPI + S G + L+ GAI + +P ++ + Sbjct: 240 ALITAQCALDLGRDVYAVPGPITSRASRGVNRLLFDGAIPLVDPNDLFPE-PADVEIAGS 298 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + P + +A + +A A + V LLE+ELA + Sbjct: 299 WKIPAHLEPCYRALAR----------HQPIRAGELAAVADLDLGYVFGALLEMELACMVT 348 Query: 353 AVPGGYVRLRR 363 P G +R Sbjct: 349 RHPDGTYHIRP 359 >UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJT8_ALKMQ Length = 378 Score = 326 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 166/374 (44%), Gaps = 21/374 (5%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 W+ L + + R+ ++ I ++ G+ A+ + K Sbjct: 2 LYWIWLSEVKGIGPVMQKRLLAYLQSPKAIYTASSEELMNVPGIGCHLAEEITTSSLKRA 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + L N L+ E YP + P L+ G L +S + +VG+R S Sbjct: 62 QEILGMCNGLNIQLLTFHDERYPSRAKEYPLCPILLYYRGHLVE-NSIGVGIVGARRCSS 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ + + LA + + SG+A+GIDG AH + L+ G ++A LG+G++ +P+ H Sbjct: 121 YGKEIAKQAGQYLAQNNIPVISGMAKGIDGYAHISCLKAGGYTLAFLGSGVDICYPKEHD 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L A ++E GA++S++P + P FP+RN +IS S+ +LVVEA +SG+L+TA+ Sbjct: 181 ELMARIMES-GAVLSQYPPETKPKPQYFPKRNALISAWSEKILVVEAGAKSGALITAQYT 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN---------------LQF 285 + REV A+P I + +G + LIK+GA + PE+++ L+ Sbjct: 240 KQLKREVLAVPNQIYSQMGKGTNQLIKEGATIYLGPEQLINTEPVMNVEAKIIGDNGLKP 299 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + Q ++ + + + E ++ + L Sbjct: 300 VKGNKKRKAMEAMKIASPQVNTPTEQRVIDALFGTPKTMAQIVEETKLQQLVLLEVMTIL 359 Query: 346 ELAGWIAAVPGGYV 359 EL G I+++PGG Sbjct: 360 ELEGKISSLPGGKW 373 >UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderiaceae RepID=B2T1K4_BURPP Length = 422 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 133/404 (32%), Positives = 190/404 (47%), Gaps = 54/404 (13%) Query: 14 SSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------RKSIESSLCWL 67 L + + I + A + +++ + W Sbjct: 21 PGLKPGALRLLLGAFGLPEAIFEQAPEALAEIAGAAAASAALAPTGPDFDAQLDAVIAWR 80 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 EQP + ++ D YPP LL D P L+++G L+ LH+ +A+VGSR+ + G Sbjct: 81 EQPGNQVVTLDDPAYPPALLTMPDPPPLLYIKGRLNLLHTRAVALVGSRSATPQGVEDAE 140 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L+ GVT+ SGLA GIDG AH+ LQ G ++AV+G G + ++P H LA + Sbjct: 141 RFARELSVAGVTVVSGLALGIDGAAHRGGLQGIGGTVAVIGTGADLVYPAAHHALARQIA 200 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 Q GA++SE+PL P A +FP+RNR+I+GL GV++VEAA+RSGSL+TAR A E GR++ Sbjct: 201 VQ-GAILSEWPLGTPARAAHFPQRNRLIAGLVSGVVIVEAAMRSGSLITARLANEMGRDI 259 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP---------------- 291 FALPG I P S G H +IKQGA LV P+E+LE L F P Sbjct: 260 FALPGSIHAPLSRGCHRIIKQGAKLVETPDEVLEELGFARQAAPRAASGSAHATFSNRAF 319 Query: 292 -----------------------------DAPENSFYSPDQQDVALPFPELLANVGDEVT 322 A + LLA +G T Sbjct: 320 SRNTPTGSGAAADRAQLAALQPTEASPAVSAEAPLAAATPCPPANPEAQRLLAALGHSPT 379 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACH 366 ++++A R ++ T LL+LELAG + +PGG RA H Sbjct: 380 TLEILATRTEMEDADLQTALLQLELAGHVTMLPGGRFM--RASH 421 >UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG6_CLOCL Length = 344 Score = 326 bits (836), Expect = 8e-88, Method: Composition-based stats. Identities = 97/345 (28%), Positives = 168/345 (48%), Gaps = 5/345 (1%) Query: 22 VRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEF 81 + I V+ + + E + +L + + ++ + + Sbjct: 3 RELLEEYQCTKDIYEVLTAYKNF-EYNIKNIEPLDKSYCEEVIKYLAKNDIKIVKINDKN 61 Query: 82 YPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 YP +LL D P LF +G++ L+ +A+VGSR + YG + + L + +++ Sbjct: 62 YPKELLNYDDMPSILFYKGDIEPLNKNENVAIVGSRNPTNYGIDVAEIITKYLCKKEISL 121 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 SGLA+G+D V HK + N + AV+G+G++ +P + L ++ G ++SEFPL Sbjct: 122 VSGLAKGVDAVVHKISCDKNNYTCAVIGSGIDVTYPYSNKELYKRII-NNGCILSEFPLH 180 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 PL+YNFPRRNRIIS LSK ++VVEA+ +SGSL+TA L+QG+E+ A+PG I + S+ Sbjct: 181 TKPLSYNFPRRNRIISALSKRIIVVEASEKSGSLITAGHGLDQGKEIIAVPGSIFSEQSK 240 Query: 261 GPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 G + LI GAI + + E L + + N+ + ++ + N+ D Sbjct: 241 GTNKLISDGAIPFLSLDTLRETLSISIDKNENMCNNN--RDNTWSLSEVESRIFENLSDS 298 Query: 321 VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 VD + + ++ L E++ I + G Y + Sbjct: 299 PIHVDDLISMVNIDINQIYKVLFEMQAKNLIYTLSGNYYAKKYTS 343 >UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SI17_9FIRM Length = 375 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 152/361 (42%), Gaps = 10/361 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRKSIESS 63 WL L + ++ + +R +S + Sbjct: 20 WLWLSQVLGPASLHAGKVLDAFGGAQEAWEARETEEFRQAAGDTAFKRAAQLDAESFHTL 79 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYG 122 + + ++P D YP D P L+ G+ L+ + +VGSR + YG Sbjct: 80 VMQCDALRVRILPFDDPDYPLAFSRIPDMPLVLYCTGDPRWLNEPGTVGIVGSRKPTEYG 139 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 LA G I SGLA G+D H+AA++ + +IAV+G ++ +P +A L Sbjct: 140 LNAAADIGGELAKNGAVIVSGLADGLDSAGHRAAVKNDCPTIAVMGVPIDRTYPAANAAL 199 Query: 183 AASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + E+ G ++SE+P + N F +RNR+I+ LS VLVVEA +SG++ T A Sbjct: 200 RQQI-ERKGCVISEYPPYSEYVGPNCFLQRNRLIAALSSAVLVVEAREKSGTMSTVAHAE 258 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 G+ V+A+PG I +P S G + L++ G L + + Sbjct: 259 RYGKPVYAVPGSIYSPNSAGTNGLLRDGRARAVAGA----ADLLAALGLHTRQASPAAAK 314 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +LA +G + ++ + G P+ ++ L++LEL G + PG L Sbjct: 315 QPAPLSDTERRVLACIGPKPVGIEELCVSTGLPMSALLGTLMKLELTGRVYKQPGQRYVL 374 Query: 362 R 362 R Sbjct: 375 R 375 >UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS59_LAWIP Length = 421 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 110/371 (29%), Positives = 171/371 (46%), Gaps = 36/371 (9%) Query: 4 TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKS 59 E W L L L G ++ +Q G+ ++ LS ++ Sbjct: 29 KEFWASLALKYTKGLGGRTYKKLLTSFGSAFEALQQVKKWKQLGIPSDKSLGILSDSWRA 88 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YP L +D P L+ G++ L + +A+VG+R Sbjct: 89 GAKKEWEAVRGCYGTILLWTDPRYPNLLKEISDPPLFLYCLGDISLLENPCIAIVGTRKC 148 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R R F + LAT G+T+ SG+A GID AH +++ G +I VLG+G+N +PR+ Sbjct: 149 SIEGIRVTRAFAKGLATAGITVVSGMALGIDREAHLSSIDFPGKTIGVLGSGINISYPRQ 208 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 ++ + LL G L+SE+ P FP RNRIISGLS GVL+VEAAL SGSL+TAR Sbjct: 209 NSDV-RELLVNKGLLISEYAPGTRPEPGFFPTRNRIISGLSLGVLIVEAALHSGSLITAR 267 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA----- 293 ALEQ R V+A+PG IG+P +EG LI++GA + ++IL +L L + Sbjct: 268 LALEQNRSVYAIPGAIGSPFAEGCQDLIREGARPIFSVDDILHDLSESLKGFINQYNKQD 327 Query: 294 ----PENSFYSPDQQDVALP---------------------FPELLANVGDEVTPVDVVA 328 + ++LP +++ + E +D + Sbjct: 328 IIYKEKKEGLEEQDIMLSLPASNDKTTVINKQSQYKTFGKIERQIIDIIRLEPKDIDQLC 387 Query: 329 ERAGQPVPEVV 339 + P E+ Sbjct: 388 QLLQLPAEEIS 398 >UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Idiomarina RepID=A3WIH9_9GAMM Length = 347 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 130/326 (39%), Positives = 173/326 (53%), Gaps = 8/326 (2%) Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALF 97 Q + R Q S R + ++ WLE N ++ + YP L P LF Sbjct: 29 SEQLEAIEDRCLQSIKSVQRAYVLQAMHWLENDNCGVVGWFDDQYPKLLRTIERPPMVLF 88 Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +G L +A+VGSR S YG + A G+ + SGLA GID AH+AAL Sbjct: 89 YKGRTELLSQASVAMVGSRKASHYGIQVTDQLARECAQSGLAVVSGLAMGIDAAAHRAAL 148 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G +IAVLG G++ I+PRR+ L L+ G ++SEF P +FPRRNRIISG Sbjct: 149 DY-GATIAVLGTGIDQIYPRRNRELYE-LISHQGLIISEFSPGTPARMDHFPRRNRIISG 206 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 +SKGV+V+EAA RSGS+ TA AL +GREV A+P + EG HWL+K+GA L+T Sbjct: 207 MSKGVVVIEAARRSGSISTALSALREGREVGAVPNSVFAKSQEGCHWLLKEGAHLITCAS 266 Query: 278 EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 +IL A E S + L L ANV ++ +D + ER G V E Sbjct: 267 DILSWFDI------SASEPSQQTRCTIPKHLANNPLFANVSNDPVSLDELVERTGLSVAE 320 Query: 338 VVTQLLELELAGWIAAVPGGYVRLRR 363 V QLL LEL G I A+PGGY+++ R Sbjct: 321 VSEQLLLLELEGLITAIPGGYIKVGR 346 >UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidetes RepID=A5FL93_FLAJ1 Length = 366 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 172/370 (46%), Gaps = 14/370 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 M D E L L+ + + ++ +K + Q G+ + Sbjct: 1 MSDQELFYLLALLKVDGVGDIMAKKLLVNCSKAEDVFKTKTNQLAAIDGVGSVLLKNLKD 60 Query: 55 FP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + L ++ + N + E YP +L D P LF G ++ + +++V Sbjct: 61 KSIFEKANQELEFIRKNNITVSYFQEENYPDRLKHCLDSPVLLFSGGNINLKNKKIISIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + R E L I SG A G+D VAH+ A+ N +I VL +GLN Sbjct: 121 GTRQITSYGIEFCRKLIEDLIPLDPVIVSGFAYGVDIVAHQFAMDYNLQTIGVLAHGLNQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+ H + A + E G ++EF P NF +RNRI++G+S+ +V+E+A + GS Sbjct: 181 VYPKTHKKYMAKM-EGNGGFITEFWSSSNPDKENFVKRNRIVAGISEATIVIESADKGGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPD 292 L+TA A + R+VFA+PG + + S+G + LIK Q A ++T +++ L + L P Sbjct: 240 LITANLANDYNRDVFAVPGRVTDRYSQGCNDLIKTQKANVLTSAADLIYVLNWDLEKKPK 299 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWI 351 + + D+ ++ + +D++A P+ ++ LL +EL G I Sbjct: 300 VIQQQLF----IDLNPDEQKIYDFLLKNGKELLDIIALECDLPIFKISGTLLNMELKGII 355 Query: 352 AAVPGGYVRL 361 +PG + Sbjct: 356 RPLPGKMFEV 365 >UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiaceae RepID=B3EFC5_CHLL2 Length = 392 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 119/380 (31%), Positives = 185/380 (48%), Gaps = 15/380 (3%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFP---- 56 L L S+ L + I Q + L+ G+ A+ F Sbjct: 12 LFLLTLASVPGLGPARINAIITRFGYQPDLLRASADVFLEVPGIGRSLAEEISGFLSGSK 71 Query: 57 RKSIE----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 R+ E L++ L+ +P L D P LFV G +A+ Sbjct: 72 RREAEEASLRQYEELDRHQASLVTIFDPCFPALLKEIYDPPPFLFVRGSFSEPEPPSIAI 131 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG++ L LA+RG+ I SGLA GID AH+AA++ G +IAVL ++ Sbjct: 132 VGTRRASAYGKQAAGLLSGELASRGLLIVSGLAYGIDTAAHEAAMRAGGKTIAVLAGSVD 191 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++ ++ ++EQ GAL+SE L FP+RNRIISG+S G +VVE+ L+ G Sbjct: 192 HVYTDPRGKIWPKIIEQ-GALISEELFGSELLPGKFPKRNRIISGMSLGTVVVESDLKGG 250 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA ALEQ REVFA+PG I + S G + LI+ G A +V +++LE L +P Sbjct: 251 ALITASYALEQNREVFAVPGTIYSHNSRGTNRLIQSGQAKMVLATDDVLEELNRPSLNIP 310 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E++ ++ ELLA + +D +A +AG + E++ L ELEL + Sbjct: 311 -VHEHAATDTVTIVLSKAERELLAYMDTGPIHIDALALQAGHDISELLVLLFELELKKAV 369 Query: 352 AAVPGGYVRLRRACHVRRTN 371 +PG + ++ H + ++ Sbjct: 370 VQLPGQFFGKKQIKHEKNSH 389 >UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria RepID=A9BS71_DELAS Length = 405 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 139/393 (35%), Positives = 199/393 (50%), Gaps = 31/393 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL+ + R+ +I + +T QA + P++ Sbjct: 14 EELSAWLRLLLTPGVGRTTARRLLAACGGAQNIWSGPPAAWHGLVTAAQAHSLQTVPQRL 73 Query: 60 ---IESSLCWLEQPN----HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF---- 108 + +++ WL+QP H ++ YP LL T D P L V+G + Sbjct: 74 EQLVAATVQWLDQPASGQLHAVLALGHPQYPQALLQTEDPPLLLHVQGSERCMTGPGPWF 133 Query: 109 ----QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS- 163 LA+VGSR + G R + LA G+ I SGLA+G+DG AH+ AL+ + Sbjct: 134 PYPQSLAMVGSRGPTVQGAANARAMAQALAEAGLCIVSGLAQGVDGAAHEGALRAVLRTG 193 Query: 164 -------IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 IAV+G GL+ ++PRRH LA + G +VSE+PL P+A +FP+RNRII+ Sbjct: 194 AQAAPVTIAVVGTGLDQVYPRRHIGLARE-VASHGLIVSEYPLGTGPMAAHFPQRNRIIA 252 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 GLS+G LVVEAAL+SGSL+TAR A EQGREVFA+PG I P S G H L++QGA LV Sbjct: 253 GLSQGTLVVEAALQSGSLITARLASEQGREVFAIPGSIHAPQSRGCHALLRQGAKLVETA 312 Query: 277 EEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPELLANVGDEVTPVDVVAERAG 332 +++L+ LQ LP A + Q L + + +D + +R G Sbjct: 313 QDVLDELQGTAVRLPIAKPVPAAAAAAAAVQSAQDHENDATLRALAHDPLSLDELMDRTG 372 Query: 333 QPVPEVVTQLLELELAGWIAAVPGG-YVRLRRA 364 + LLELEL G + +PGG + RL +A Sbjct: 373 MDAAALQAHLLELELEGRVERLPGGLFQRLAQA 405 >UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZE6_DESDA Length = 442 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 124/416 (29%), Positives = 174/416 (41%), Gaps = 61/416 (14%) Query: 4 TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAV--VLQQTGLTLRQAQRFLSFPRK- 58 TE W L L + L R+ ++ GL +QA + + Sbjct: 16 TEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRV 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YPP L D P L+ G+L L + AVVGSR Sbjct: 76 TARDEWDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRA 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + +G L+ GVTI SG+A GID VAH+AAL G SI VLG G++ ++P Sbjct: 136 TEHGRAVAAHMSRCLSACGVTIVSGMALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSV 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + ++ ++EQ G LVSEF PL +FP RNRIISG + GVLVVEAA RSGSL+TAR Sbjct: 196 NRKIFG-MMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLVVEAASRSGSLITAR 254 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL--------------- 283 ALEQ REV+A+PGP + G L++QGA V E++L +L Sbjct: 255 LALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLG 314 Query: 284 -----QFGLHWLPDAPENSFYSPDQQDVALPFP--------------------------- 311 L +P+A + A P Sbjct: 315 DEEKIGPELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENL 374 Query: 312 -------ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 LL + D +A V ++ L+ LE+ G + +PG Sbjct: 375 APAGRRAALLDCLRQRGPMQADDLACALDISVADLNVMLVGLEMLGQVCRLPGARY 430 >UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular organisms RepID=A0KBJ9_BURCH Length = 475 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 125/394 (31%), Positives = 176/394 (44%), Gaps = 39/394 (9%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR--FLSFPRKSIE-- 61 WL+L L + + + + A + R ++ Sbjct: 66 AWLQLAHAPGLSPAVLQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLDTR 125 Query: 62 --SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++L WL+ P + L+ YPP+L D P L+V+G L LH+ LAVVGSR + Sbjct: 126 TGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPPLLYVKGRLDLLHARGLAVVGSRHAT 185 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G F L+ G+TI SGLA GIDG AH+ L ++AV+ G + ++P RH Sbjct: 186 PQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPARH 245 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + GA+VSE+PL P A +FP+RNR+I+ L+ G LVVEAA RSGSL+TAR Sbjct: 246 RALAHEIAAH-GAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITARL 304 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP-------- 291 A E GR+VFA+PG I P ++G H LI+ GA L P ++LE G Sbjct: 305 ANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAMRA 364 Query: 292 ------------------------DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 A +L +G + + Sbjct: 365 GNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAAPPGTPSEQAVLTALGYGPVTYEWL 424 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 AE +G + LL LELAG +A+V GG Sbjct: 425 AEHSGLSNDVLHGALLALELAGRVASVAGGRFAR 458 >UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHB6_9BACT Length = 368 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 9/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T + L ++ + + I + + + A+ R+ E Sbjct: 8 TETLSLMTLGALPGVGLKTLRTILARYKSATAALEAFARGAEVCACSAENLAEA-RQWAE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + E ++ YP +L D P LF G + + +AVVG+R + Y Sbjct: 67 AEMAYCEAHAVRILTMADADYPARLRTCDDAPPYLFYRGAANLNAKYVVAVVGTRNITEY 126 Query: 122 GERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G+ R C LA V + SGLA G+D AH+ AL N ++ VL +GL+ ++P H Sbjct: 127 GKDLCRHLCRDLADFSPDVLVLSGLAYGVDVHAHRQALAANLPTVGVLAHGLDRLYPSAH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A ++L +GG L +E+P P F +RNRI++G++ V+VVE+ +R G+L TAR Sbjct: 187 RTTAIAMLNKGGLL-TEYPRLTVPEKGRFLQRNRIVAGMADVVVVVESGIRGGALATARL 245 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A + R V+A PG + S G + L++ G A L+T E++L + L E S Sbjct: 246 ARQYERPVYAFPGRASDEMSAGCNALLRDGRAKLITSAEDLLSD---WLGVKVKVQEASP 302 Query: 299 YSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + D+ +L+A + + +D +A A V + L +L + G++ +PGG Sbjct: 303 ATDLFADLTRNEQKLIAVLKQHDCRTLDQLAAEADLAHSVVASLLFDLNMRGFVKTLPGG 362 Query: 358 YVRLRR 363 RL R Sbjct: 363 AYRLVR 368 >UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacteria RepID=Q48QH9_PSE14 Length = 372 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 149/365 (40%), Positives = 196/365 (53%), Gaps = 9/365 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFP-RK 58 + E LR+ + + R+ S + + G+ A+ + R Sbjct: 13 ELEARLRMHRLPEIGPKRFSRLIEAFGSASSALSAPASAWRALGIPGACAEARRAPSVRD 72 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++L WLE P HL+ D YP L D P +F+ G+ L QL +VGSR Sbjct: 73 GASAALAWLECPAQHLLMWDDPCYPALLAEIADPPPLIFIAGDPSILERPQLGMVGSRRA 132 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R F +LA G ITSGLARGIDG AH+ AL V G +I VLG L ++P++ Sbjct: 133 SRPGLDTARAFARSLAGAGFVITSGLARGIDGAAHQGALDVGGHTIGVLGTRLEKLYPQQ 192 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LAA + QGGA++SEFPLD P NFPRRNRIISGLS GVLVVEA++ SGSL+TAR Sbjct: 193 HRALAAQMAAQGGAVISEFPLDAEPQPSNFPRRNRIISGLSLGVLVVEASVASGSLITAR 252 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A EQGREV+A+PG I +PG++G H LI+ GA LV E ILE LQ P AP + Sbjct: 253 LAAEQGREVYAIPGSIHHPGAKGCHQLIRDGATLVETVEHILEGLQHWKSVAPAAPPETP 312 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 P D LLA + + ++ +G P+P+V+ L ELEL G I+ G + Sbjct: 313 AKPVPCD-----HPLLALLHAAPHTSEGLSVSSGWPLPKVLAGLTELELDGRISCEAGRW 367 Query: 359 VRLRR 363 Sbjct: 368 FARAP 372 >UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S1_9FIRM Length = 367 Score = 324 bits (830), Expect = 5e-87, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 175/347 (50%), Gaps = 9/347 (2%) Query: 23 RIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSF-PRKSIESSLCWLEQPNHHLIPA 77 R+A + +Q LT + AQ + + + + E + L+ Sbjct: 23 RLAAYFGSAKEAFEASFEQVKASGILTEKGAQHYRKWYDPGLPQKIADYCEIAHISLLGI 82 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG 137 YP L D P L+V+G+L L + LAVVGSR + YG F LA+ Sbjct: 83 QESGYPASLREIADPPWVLYVKGKLPNLTA-YLAVVGSRKATGYGLSIAERFSRVLASEK 141 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 + I SG A GID AH+ AL G +I+VLG+GL +P RH L + E GA++SEF Sbjct: 142 IAIVSGGAYGIDAAAHEGALLGGGKTISVLGSGLARPYPVRHKGLFQRISET-GAVISEF 200 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 PP+AY FP RNRII GLS GVLVVEAAL+SG+++TA A ++GR+V+A+PGPI + Sbjct: 201 SPFTPPMAYQFPMRNRIIVGLSSGVLVVEAALKSGAMITAHLAADEGRDVYAVPGPIESF 260 Query: 258 GSEGPHWLIKQGAILVTEPEEILEN-LQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN 316 S+G H LIK+GA LV +P+++L+ + A E S + L Sbjct: 261 TSKGTHALIKEGAHLVDDPQDLLDVYFPEDVPKGAHAVELSLFETFPVPDRKKAEALYDF 320 Query: 317 V-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + G ++ + P+ V LL +E+AG + G +R Sbjct: 321 IKGGNGKQMEEIMAHFPWPLSFVSMLLLRMEVAGMVRKSAGNRYLVR 367 >UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VR82_MARMS Length = 442 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 127/428 (29%), Positives = 192/428 (44%), Gaps = 74/428 (17%) Query: 7 WLRLMSISSLYGDDMVRIAHWVA--------------------------KQSHIDAVVLQ 40 WL L +S + + R+ +++ I +L Sbjct: 14 WLCLSFLSGIGPSRLSRLYTYLSQFDYHASMDNAENLPLFSNEELSDTSPSETITYDLLI 73 Query: 41 QTGLTLRQAQRFLSFPRKSI---------ESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 A++ + + I + SL WLE+ +HHL+ + E YP L + Sbjct: 74 ALKWPEITARQAMDYFSNGILTKEQEAKRDESLAWLEEADHHLVLQEDEHYPTALKEISV 133 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P L+VEG L ++ +VG+R + YG F E L+ RGV + SG A G+D Sbjct: 134 APAFLYVEGNRDTLALPKVGIVGARKCTRYGRDATFQFAEQLSARGVCVVSGGAMGVDTA 193 Query: 152 AHKAALQVNG-VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 AH+ AL +IAV+G GL +P + ++ +LEQGGAL+SE+PL P + FP Sbjct: 194 AHQGALYNKTTPTIAVMGTGLFHRYPHHNRQMFEEILEQGGALISEYPLSTSPRPHLFPP 253 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGA 270 RNRIISGLS GVLV EA+L+SGSL++A A++Q REVFALPG + +P SEG H L++QGA Sbjct: 254 RNRIISGLSMGVLVSEASLKSGSLISASYAIQQNREVFALPGRLIDPQSEGCHQLLRQGA 313 Query: 271 ILVTEPEEILEN--------------LQFGLHWLPDAPENSFYSP--------------- 301 LV ++IL + A E + +P Sbjct: 314 TLVRHVDDILAECSDLSLPSAPITKSVNITKRVKSSAAEKNTKNPLSNNRNQTAESMPVL 373 Query: 302 -------DQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + ++A + E D + ++ ++ L+ELEL G + Sbjct: 374 VSNQVHALPESTSDNAKAVIAIMEQEAQPMDFDALIRQSKMDAGLMMQVLMELELYGCVE 433 Query: 353 AVPGGYVR 360 G Y R Sbjct: 434 NREGLYCR 441 >UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2K2_9GAMM Length = 301 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 124/296 (41%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L ++ YPP L D P L V G L QLA+VG+R S G + Sbjct: 8 LRAAGTEVLSLADPLYPPLLKTIPDPPPVLHVRGNPMLLARPQLAIVGARRASAAGLQAA 67 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 G+ +TSGLA G+DG AH+ AL G ++AV+ G+ TI+P RH L + Sbjct: 68 HKLAVAAVRAGLGVTSGLALGVDGAAHRGALSAGGDTVAVMATGIETIYPHRHEPLGQEI 127 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 G LV+EFP PL Y+FP+RNRIISGLS GVLVVE+AL SGSL+TA A+EQGRE Sbjct: 128 ASS-GCLVTEFPPGTKPLPYHFPKRNRIISGLSLGVLVVESALPSGSLITATSAMEQGRE 186 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 VFALP I + G G LI+ GA +V E+ILE L + + S P + + Sbjct: 187 VFALPWSISHKGGAGCLSLIRDGAKMVLGIEDILEELDSLFGLQQELSQVSTI-PSPESI 245 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + LL +G EV +D + +G PV +V+ +L LELAG + PGGY+R R Sbjct: 246 SEQDCLLLELLGFEVISLDQLVVASGLPVGQVMGELSSLELAGRVNRCPGGYIRSR 301 >UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizobiales RepID=A5EKR2_BRASB Length = 372 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 124/357 (34%), Positives = 178/357 (49%), Gaps = 7/357 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLT-LRQAQRFLSFPRKSIESSLCW 66 LRL+ ++ + + + + + R + E+ L Sbjct: 19 LRLIRSDNVGPRTFRSLLNHFGTARAALDRLPELARRGGAARVGRICTIDE--AEAELDA 76 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 + L+ + YPP+L + D P L V G L +A+VGSR S G ++ Sbjct: 77 CLRQGVQLLAPEENGYPPRLASCEDAPPLLGVRGARETLMQPMIAIVGSRNASAAGLKFA 136 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 L G I SGLARGID AH+A+L ++AVL G + I+P H L ++ Sbjct: 137 GQLAHELGRAGFVIISGLARGIDQAAHRASLSSG--TVAVLAGGHDRIYPPEHIDLLGAI 194 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 +E+ GA +SE PL P A +FPRRNR+ISG S GV+VVEAA RSGSL+TAR A EQGRE Sbjct: 195 VERNGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGSLITARMAGEQGRE 254 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA--PENSFYSPDQQ 304 VFA+PG +P + G + LIKQGA LVTE +I++ + + P A E+ Sbjct: 255 VFAVPGSPLDPRAAGTNDLIKQGATLVTEAADIIQAVGPIMERPPSASLRESDEELFAPA 314 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +++A +G +D + +G + LLELELAG + GG V L Sbjct: 315 PESHDRDQIIALLGPTPVSIDDLIRISGLSPAVLRVVLLELELAGRLERHGGGMVSL 371 >UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepID=A5CDZ7_ORITB Length = 386 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 14/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL ++ + V L + + + Sbjct: 16 DETIYTLRLARSENVGPKTFFELIRLFGSAKIALQNVA-YFSLKGGKRKPIKIYTNSEAL 74 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L + N L+ Y LL D P + +G++ L+ LAVVGSR S Sbjct: 75 QEIEVLRKFNAFLLTHHHSEYSKLLLHIPDPPPVIIYKGDIKLLNHKILAVVGSRNASLN 134 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + + + L + I SGLARGID AH++AL +IAV+ G++ I+P+ + Sbjct: 135 GVTFTKNIVKKLVDNKIVIASGLARGIDTAAHQSALPS---TIAVIAGGVDHIYPQENIN 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +++E P+ PP++ +FP+RNRII+G+S G LVVEA L+SGSL+TAR L Sbjct: 192 LYHKI-ANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKSGSLITARLTL 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG--------LHWLPDA 293 E RE+FA+PG +P +G + LIK GA LV + E+I+E L Sbjct: 251 EYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFT 310 Query: 294 PENSFYSPDQQDVALPFPELLAN-VGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 S + ++ N + ++V+ + P+ V +LELELAG +A Sbjct: 311 QYKDHGSYQSTTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVA 370 Query: 353 AVPGGYVRL 361 G + + Sbjct: 371 RCLGNKIVI 379 >UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBH9_9FIRM Length = 365 Score = 322 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 113/367 (30%), Positives = 175/367 (47%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH---IDAVVLQQTGLTLRQAQRFL-SFP 56 M + L + + GD + I+ +++ +T ++ S Sbjct: 1 MSEMWYTYWLACVEGITGDRKCELCRKNGSAEAVYYIEEKGIREQIITEKEWGILKESKK 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + + + YP + P ALF GE+ +AVVG+R Sbjct: 61 KRNWREAYQKVVDRGIQMAVRGQNNYPKRFEELAGMPYALFFIGEMPREGMPSVAVVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YGE+ F E LA G+ I SG+A GIDG+AH+AAL V G + AVLG G + +P Sbjct: 121 RCSSYGEKMTLRFVERLAESGIQIISGMALGIDGMAHRAALNVGGKTFAVLGGGADVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L L+++GG ++SE P PP+A++FP RNR+ISGL+ VLV+EA +SGSL+T Sbjct: 181 AAHKGLYKDLIKRGG-ILSEQPPGTPPVAWHFPARNRLISGLADVVLVMEAKEKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+++ALPG + P S G + LI+QGA + EE L L Sbjct: 240 ADMALEQGRDIYALPGMVTEPLSCGCNRLIRQGAG-ILLNEEDLLEELVIKGLLKKKIAI 298 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ + + + +G +D + G EV+ + L+L G I Sbjct: 299 ISDTKNKIKLETKENLVYSKLGLYPRGLDDLQRETGLTPQEVMGICVSLQLKGCIQERSK 358 Query: 357 GYVRLRR 363 Y + Sbjct: 359 NYYVRAK 365 >UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZT2_9RHIZ Length = 377 Score = 322 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 106/360 (29%), Positives = 166/360 (46%), Gaps = 10/360 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL ++ ++ + + + L R +R R +IE+ Sbjct: 21 WLRLYRSENVGPVTFRQLINRFGGAEAALEALPE---LAERGGRRIEIADRGAIEAEFDR 77 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 ++ +P + P + G+ +A+VG+R S G + Sbjct: 78 AKKLGAVFACMGEPGFPSMFASDEHSPPVIARMGDPALFEQPAVAIVGARNASLSGIKLT 137 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + F L G + SGLARGID AH+AA+ +I V GL+ +P + L + Sbjct: 138 KRFAADLGAAGYVVVSGLARGIDAAAHEAAISTG--TIGVFAGGLDMPYPPENRSLMRRI 195 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 +++GG L+S P P A +FPRRNR+++ L+ G+LVVEAA RSGSL++AR A E GR Sbjct: 196 VDEGGCLISARPFGWEPRAKDFPRRNRVVATLALGLLVVEAAQRSGSLISARIANELGRL 255 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD---- 302 VFA+PG +P + G + L+K GAIL TE +++E L+ +S P+ Sbjct: 256 VFAVPGSPLDPRAGGSNKLLKDGAILATEAADVIEALRPLDEGRRSRGNDSLDEPEVLET 315 Query: 303 -QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + +G VD + E G V +LELELAG + G V + Sbjct: 316 FEEPAGDERDRIYEALGPTPVSVDDIVEHTGASPGAVQLVVLELELAGRLERQRDGTVSI 375 >UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTJ7_CHRSD Length = 371 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 146/376 (38%), Positives = 190/376 (50%), Gaps = 16/376 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTGLTLRQAQRF----- 52 M E W L + L + + L R+ R+ Sbjct: 2 MTARE-WCALAHLPKLGARRLAVLRRELAAQGLDDAWPQAWLAAMPAGPRETLRYWLEHP 60 Query: 53 -LSFPRKSIESSLCW-LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL 110 S S+ +L W P+HHL+ +P L D P L+ +G+L AL L Sbjct: 61 AKSPLETSVSQALAWEASAPSHHLLYPGHPAWPALLDEIADPPALLWAKGDLAALEPPGL 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+R + G F L G +I SGLA GIDGVA + AL G S+AVLG G Sbjct: 121 AMVGTRRPTREGSDNAAWFARGLVEAGFSIVSGLALGIDGVAQRTALDAGGRSVAVLGCG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + I+P RHA L LL++GG L+SE P + A +FPRRNRII+GLS GVLVVEAA + Sbjct: 181 VEVIYPPRHAGLYRRLLDEGGLLLSEHPAETRAHARHFPRRNRIITGLSLGVLVVEAAEK 240 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SGSLV+AR ALEQ REVFA+PG + N + G LI+ GA LV ++ILE L W Sbjct: 241 SGSLVSARLALEQNREVFAVPGSLHNVQARGNLGLIRDGAWLVRGRDDILEQLG---QWQ 297 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + + P LLA + TP+DV+ ER+ V +LLELELAG Sbjct: 298 APQAVVASTDDMTEAANAPADPLLALLDTAPTPLDVLVERSELDVGGCQMRLLELELAGQ 357 Query: 351 IAAVPGGYVRLRRACH 366 A V GG+ +RRA H Sbjct: 358 AAQVSGGW--VRRATH 371 >UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacter RepID=A5WI26_PSYWF Length = 421 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 114/393 (29%), Positives = 172/393 (43%), Gaps = 52/393 (13%) Query: 21 MVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKS----IESSLCWLEQPNHH 73 ++ Q G+ + R ++ I + Sbjct: 29 FYKLIAHFETAQQALQAGRSQWQNLGIHKKHLDRHAQASQEEDAQFIAQLEQRMAAGEFQ 88 Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 L+ YP QLL D P LF G L+ Q+A+VGSR + +R+ + L Sbjct: 89 LLFQQQADYPQQLLGLFDPPPLLFYRGNKQRLNQAQIAIVGSRRPTPKAQRFSFDIAQYL 148 Query: 134 ATRGVTITSGLARGIDGVAHKAAL----QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 A G I SGLA+G+D AH AL + G S+ V+G G++ +P++H L ++ + Sbjct: 149 AKSGFIICSGLAQGVDAQAHLGALSQSAEYAGRSVGVMGTGIDVCYPKQHQALFDRMIAE 208 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 GG +VSE PP + FPRRNRI++GLS G +V EAAL+SGSL+TAR EQG++VFA Sbjct: 209 GGCIVSELFPGTPPHKHTFPRRNRIVAGLSLGTVVTEAALQSGSLITARLTSEQGKQVFA 268 Query: 250 LPGPIGNPGSEGPHWLIKQGAILVTEPEEIL-------------------------ENLQ 284 LP I N ++G H LI++GA LV P++I+ ++L Sbjct: 269 LPSDIDNVNAQGGHHLIREGATLVYHPDQIVSDLCHQLVTPVQISQAKDTIYGNSSDHLH 328 Query: 285 FGLHWLPDAPENSFYSPDQQDVALPFPELLAN----------------VGDEVTPVDVVA 328 P N+ S +L + E +D + Sbjct: 329 ANATSHPTKHPNAVSSDTTATPKDNVNPILKAQKSVTISEHLQPLWVHIQFEPQDLDALI 388 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +++QL+ELEL G +A V G Y R+ Sbjct: 389 NKTQLDTATLLSQLMELELMGAVAEVGGRYQRV 421 >UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=A9IU37_BART1 Length = 404 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 120/378 (31%), Positives = 179/378 (47%), Gaps = 23/378 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 WLRL+ ++ + + + A L + A + E Sbjct: 18 RLSWLRLLRSENIGAVSFRNLIDYYKTAENALAA-LPELSRKGGGAASLKIASLEDAEKE 76 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + E+ I YP L T P + V+G + + ++GSR S G+ Sbjct: 77 IQEAEKLGVRFIGMGEPDYPAFLKVTEARPPLIAVKGNVLIFQKTSVGIIGSRNASAAGK 136 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + F L SGLARGID VAH+A+L+ ++AV+ G+N I+P + +L Sbjct: 137 KLTAQFAHFLGEADFVTISGLARGIDSVAHQASLKTG--TVAVMAGGINHIYPPENKKLY 194 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++ GGA++SE P+ P A +FPRRNRII+ LS G+LVVEAALRSGSL+TAR A E Sbjct: 195 EDIIANGGAIISEMPISWKPRAIDFPRRNRIIAALSLGLLVVEAALRSGSLITARQAAEM 254 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GR +FA+PG +P S G + LIK GA+L T P +I+E L + LP++ N F P Sbjct: 255 GRLIFAIPGSPLDPRSVGTNNLIKDGALLTTHPSDIIETLTPLISPLPNSQLNFFEEPSS 314 Query: 304 QDVALP--------------------FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLL 343 + +L+ + +D ++ +G +P + L+ Sbjct: 315 LKIEKENFNSAYEKNAHPSLTGDDAARAAVLSALSTTPIDLDTLSIHSGVSLPTLYLLLV 374 Query: 344 ELELAGWIAAVPGGYVRL 361 ELELAG + GG V L Sbjct: 375 ELELAGKLIRHSGGCVSL 392 >UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV04_9GAMM Length = 360 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 138/360 (38%), Positives = 188/360 (52%), Gaps = 16/360 (4%) Query: 2 VDTEIWLRL--MSISSLYGDDMVRIAHWVAKQSHIDAVVLQ------QTGLTLRQAQRFL 53 +D E L ++ ++ I L+ L + Q Sbjct: 1 MDRECHYALVSQHLNKFTPKFQRQLLESAQTYCAIFEQSLEGLPKSLHPFLENLRNQYEQ 60 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + R+++E+ + E +IP S YP QL P L++ G + LH QLA+V Sbjct: 61 ASWREAVETIVLRTEDCGARMIPITSPDYPDQLRQIGGAPRLLYLRGSIDNLHLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + G R + E LA G ITSGLA G+DG AH AL G +IAV+ G+ Sbjct: 121 GSRRMTRGGADNARAWSEHLAAGGFVITSGLAHGVDGAAHLGALDAGGKTIAVMATGIEA 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR H +LA +++QGG L++EF PLA NFP RNRIISGLS GVLVVEAALRSGS Sbjct: 181 VYPRAHLKLAEQIIDQGGTLITEFEPTTKPLATNFPSRNRIISGLSLGVLVVEAALRSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TAR ALEQ REVFA+PG I NP S G H LIKQGA LV + +EI+E L+ L L Sbjct: 241 LITARYALEQDREVFAIPGSIHNPQSRGCHHLIKQGAQLVEKAQEIVEQLKGSLSGLAQD 300 Query: 294 PENSFYSPDQQ--------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 ++ P ++ +LL+++G E T +D + V E+ L+ L Sbjct: 301 VLSATEPPQAPFSVTHGALNLEADEVQLLSHLGYEPTDMDSLISDGFFSVSELSRLLVAL 360 >UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD44_9FIRM Length = 305 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 5/288 (1%) Query: 72 HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCE 131 I YP + + P L+V+G L +AV+G+R S YG + + Sbjct: 19 IRCIEKSDPEYPQIMKQYSSMPAKLYVKGRLPDPKRRTVAVIGARMCSPYGRMQAFRYAK 78 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 L+ GV I SG+A GID HK AL+ + AVLG+G++ +P+ + +L +L + G Sbjct: 79 ALSVAGVQIISGMALGIDSEGHKGALEGKMPTFAVLGSGVDVCYPKSNRKLYERILWENG 138 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 ++SE PL P++++FP RNRIIS LS VLVVEA SGSL+TA ALEQG+ V+A+P Sbjct: 139 GIISECPLGSGPVSWHFPARNRIISALSDAVLVVEAKENSGSLITAGFALEQGKMVYAIP 198 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFP 311 G + + S G H LI GA + PE +LE L + + E + +A Sbjct: 199 GAVTDELSRGCHKLIYDGAGIAYCPEIMLEELGISMEKVTQNGEKNNL-----GLARDLN 253 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + D + + G +V L+EL L G I Y Sbjct: 254 MVYSCLDLRPKNPDYIVRKTGFSPAQVSNCLVELTLRGLIRESGRHYY 301 >UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHG5_9CLOT Length = 369 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 170/369 (46%), Gaps = 9/369 (2%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M E+ WL L + + + Q L+ RK Sbjct: 1 MKADELLDWLWLAQAFPYGSIKPAELLTEYQHARAVYEHRSECAERFDFLTQSELAAMRK 60 Query: 59 SIES---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVG 114 S + L + + +IP D YP +L P L+ G L A +AVVG Sbjct: 61 SPQEYLPILERCARFDIQVIPYDHPAYPARLQTIDCPPVVLYCRGSLAAFSESLCIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S Y +R LA RG+ + SG + GID H+AAL V G + AVL L+ Sbjct: 121 TRTPSEYSKRVAAYAGRELAQRGICVLSGCSEGIDAEVHRAALSV-GRTAAVLSCPLDKN 179 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + L +L GGALVSEFP F RNR++S LS GV+VVEA+ +SGSL Sbjct: 180 YPASNEGLRREILRHGGALVSEFPPGTEFFPEQFALRNRLLSALSDGVVVVEASAKSGSL 239 Query: 235 VTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 TAR A +QGREVF + P + NP +G L+++GA ++ E ++ Sbjct: 240 STARAAADQGREVFCVPPADLFNPRYDGVKPLLREGAAQFLSVGDVTEAFRYQFSVAATL 299 Query: 294 PEN-SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 PE + +SPD +++ EL + D+ ++ + G V +++ L +LEL+G + Sbjct: 300 PEEGTAHSPDLSELSSQEVELYRAMPDDPVDTGYLSAKTGLLVSDLMQMLTKLELSGAVR 359 Query: 353 AVPGGYVRL 361 G Y ++ Sbjct: 360 KTAGRYQKV 368 >UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE7_9DELT Length = 432 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 125/416 (30%), Positives = 177/416 (42%), Gaps = 58/416 (13%) Query: 1 MVDT---EIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFL 53 M D E W L L L R+ + G+ +A Sbjct: 15 MDDRARREYWAGLALRHCRGLGARSCCRLLRHFGSAFAALEGRERWADAGVDRGKAAEIS 74 Query: 54 SFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + + + + + + ++ YP L D P L+ G+L L + +AV Sbjct: 75 TGSWRVTARTEWDAVRDLDAVIVQWHEAAYPALLRTLPDAPVLLYCMGDLSLLANPAVAV 134 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +GSR + G+ A+ G+T+ SG+A GID AH+AAL G SIAVLG G++ Sbjct: 135 IGSRKATPRGQALAGHMAGAFASWGITVVSGMAWGIDKAAHEAALDRTGSSIAVLGTGID 194 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + RL + + G LVSEF +P L NFP RNRIISGLS GV+VVEAA RSG Sbjct: 195 VPYPRANIRLYDRMAAK-GLLVSEFAPGIPALRENFPIRNRIISGLSLGVIVVEAASRSG 253 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL----- 287 +L+T+R ALEQGREV+A+PG + S G L++QGA V PE++LE+L L Sbjct: 254 TLITSRLALEQGREVYAVPGAALSGQSLGCQELVRQGAKPVFAPEDVLEDLAGPLRDFGV 313 Query: 288 -------------------------------HWLPDAPENSFYSPD------------QQ 304 DAP D Sbjct: 314 QAEHLTREAAERRRRAEAEGTGLSRTLFACMPPETDAPARKVDPGDGEGAPAQGTDGETD 373 Query: 305 DVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 A ++ + + VD + G+ E+ LL LE+ G I +PG Sbjct: 374 TAAPAQDNIVPLLREQGPLHVDALGAALGRSPAELAPVLLGLEIMGRIRRLPGARY 429 >UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ50_DESPS Length = 357 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 169/338 (50%), Gaps = 12/338 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFP--RKSIE 61 L L S S L R+ + S + L Q GL Q F R S Sbjct: 3 LPLCSASGLGVRGFWRLIEFYHHPSRVLDASLAQIRSVAGLREGQLAGFADPQSLRLSAA 62 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L L+ I S YP L D P L+ G+L L++ LA+VG+RA + Y Sbjct: 63 EELGRLDALGLLAISFSSPLYPENLKQIFDPPPVLYASGDLSLLNTHALAIVGARASTSY 122 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R ++ G+T+ SGLA G+D AH+ AL V+G +IAVLG GL+ ++P ++ + Sbjct: 123 GRRVAHNLSSAVSLAGLTVVSGLALGVDTAAHEGALAVSGKTIAVLGCGLDIVYPYQNKK 182 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ G +++E+PL P + FP RNRII+G+S GVLVVEAA +SGSL+TA+ AL Sbjct: 183 LY-KIIAGEGLVITEYPLGTRPDGFRFPARNRIIAGMSDGVLVVEAARKSGSLITAQLAL 241 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + REVFA+PG I + S G H L++QGA LV + +ILE F L + P Sbjct: 242 DFNREVFAVPGQIDSVKSAGTHILLQQGAKLVHDVTDILEEFPFPLRVGQGGQKGEASLP 301 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVV 339 + ++L + + + + + +V Sbjct: 302 SEAG-----QQILDLLDVYPSSQEELMVESKLSAKKVA 334 >UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9Z9_9FIRM Length = 381 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 97/364 (26%), Positives = 158/364 (43%), Gaps = 14/364 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDA-----VVLQQTGLTLRQAQRFLSFPRKSIE 61 WL L + R+ + G Sbjct: 24 WLWLANTLGAGSSHAGRVLDVFGGAQEAWENRDSDAFRKAVGSPAFARANLPDNTPAHYW 83 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSW 120 + N ++P D YP D P L+ G+ L+ + +VGSR + Sbjct: 84 AFARRCAARNIRILPYDDPDYPLAFSRIPDMPLVLYCTGDPLWLNEPGAVGMVGSRRPTE 143 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG + LA G I SGLA G+D H+AA++ N +I VLG ++ +P + Sbjct: 144 YGLQAAADLGSGLAKNGAIIVSGLADGLDSAGHRAAVKENCPTIGVLGVPIDRTYPASNR 203 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + EQ G ++SE+P + P+ N F +RNR+I+ LS ++VVEA +SG++ T Sbjct: 204 ELRKKI-EQKGCVISEYPPESGPVGPNGFLQRNRLIAALSSALVVVEAQEKSGTMSTVNH 262 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A G+ VF +PG I +P S G + L+++G A V +P ++ L L A + Sbjct: 263 AERYGKPVFVVPGSIYSPNSAGTNALLQEGRAKAVCKPSDLFGVLG-----LRGAAAPAV 317 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ++ +LA +G + V+ + +G P ++ L++LELAG + +PG Sbjct: 318 VRSAPDPMSETERRVLACIGPKAKGVEELGAASGLPTGLLLGTLMKLELAGRVTCLPGKR 377 Query: 359 VRLR 362 LR Sbjct: 378 YILR 381 >UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bacteroidales RepID=C3QS04_9BACE Length = 374 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 11/369 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + + L + + + + I + + +QR + Sbjct: 6 EEQIYSIALTMVPGIGHIGAKHLIDGMNNAVDIFRLRKEIPERIPEVSQRVVDALDCPQA 65 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E ++ + + E YP +L D P LF +G L +VG+R Sbjct: 66 VIRAEQEYEFIRKNRIACLSFHDEAYPSRLRECEDAPVVLFFKGNADLNSLHILNMVGTR 125 Query: 117 AHSWYGERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + YG + F L V + SGLA GID AH+ AL ++ VL +GL+ I Sbjct: 126 NATDYGTQICASFLRDLKAVCPDVLVVSGLAYGIDIHAHREALANELPTVGVLAHGLDRI 185 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A +LE+GG L +EF P +NF RNRI++G+ +V+E+A + GSL Sbjct: 186 YPYVHRKTAVDMLEKGGLL-TEFLSGTNPDRHNFISRNRIVAGMCDATIVIESAEKGGSL 244 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A R+ FA PG + + S+G + LI+ A L+ E+ ++ + + + Sbjct: 245 ITAELAEGYHRDCFAFPGRMSDEYSKGCNRLIRDNKASLLLSAEDFVQAMGWNMQTTLSE 304 Query: 294 PENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + S +++ +++A + ++ + A PV ++ L ELE+ G I Sbjct: 305 -KVSVQRSLFIELSEEEQKIVAILEKLGNLQINSLVVEADIPVNKMTALLFELEMKGVIR 363 Query: 353 AVPGGYVRL 361 + GG +L Sbjct: 364 VLAGGMYQL 372 >UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y394_9BACT Length = 355 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 107/363 (29%), Positives = 179/363 (49%), Gaps = 15/363 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+ + L L + + + I + + ++ R A R R++ Sbjct: 1 MNGLELCVWLNGCEGLSANVLQHV-DLSDGPEKIVEKLRRDGIVSQRCADRLEKLARENW 59 Query: 61 E-SSLCWLEQPNHHLIP-ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E LI +E YP +L + P L+ +G + S ++VG+R Sbjct: 60 HGKEIERAENAGIFLISWYSNERYPSRLRGIAEPPLILYAKGNVPDFES-AYSIVGTRRC 118 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + L L+ G+ + SG ARGIDG AH AL+ +GV++AVLG G++ + P Sbjct: 119 TPYGFKVAALIGNALSRAGMVVVSGGARGIDGAAHGGALENDGVTVAVLGTGVDVVWPPE 178 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L ++L + GAL+SE+PL + FPRRNRII+GLSK ++VVE+ L+ G+++TAR Sbjct: 179 HDELFDNIL-RRGALLSEYPLGTCGRTWRFPRRNRIIAGLSKALIVVESPLKGGAMITAR 237 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A+E GR+V+A+PG I EG + LI GA + + ++++ AP Sbjct: 238 LAMEMGRDVWAVPGRIDERICEGSNRLILDGASPLVNVADFIDHVSHFGQLDLFAP---- 293 Query: 299 YSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ +L + D+ +D +++R G E++ + EL++ I GG Sbjct: 294 -----LELGDDERRVLDCLSDQGDLTLDQISKRTGISAVELMRLISELQVQSLIYTSGGG 348 Query: 358 YVR 360 R Sbjct: 349 RWR 351 >UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZE8_9SPHI Length = 370 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 10/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 ++T + + L + + + I +Q G+ + +R S Sbjct: 1 MNTLLQIALTKVKGIGPRLSRSLLSHCDAVEAIFTASKKQLLTIPGINMAIIERLRSKEL 60 Query: 58 KSIESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++ + L+ + YP +L D P L+ +G + +++VG+R Sbjct: 61 LLEAEKELSFISAHDIDLLWIEDNRYPRRLRECDDAPLVLYYKGSESLNPAKTISIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+R + L G+ I SGLA GID AH+AAL+ ++ ++G+GL+ I+P Sbjct: 121 KATAYGQRICDELIQELRLPGIQIISGLAYGIDISAHQAALRNQIPTLGIMGHGLDRIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +AA +L GG L +EF P NFP RNRII+G++ +V+EAA R G+L+T Sbjct: 181 AAHRAIAAEMLSCGGLL-TEFTSGTNPDRQNFPMRNRIIAGMADVTIVIEAASRGGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPE 295 A A R+V A PG I S G ++LIK A L+ ++ + + Sbjct: 240 AEIANTYNRDVCAFPGGIDQESSAGCNYLIKTNRAHLIRHASDLFYLMNW--EQEQQQKP 297 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ S ++ ++ + + P+D +A P ++ LLELE+ G I ++ Sbjct: 298 SAQLSLLPPQLSEEQEKIYQFLQQQNPAPIDEIAIHCALPQSQLAISLLELEMEGIILSM 357 Query: 355 PGGYVRL 361 PG +L Sbjct: 358 PGKVYKL 364 >UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYG1_BRAHW Length = 416 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 95/416 (22%), Positives = 165/416 (39%), Gaps = 61/416 (14%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSIES--- 62 + L I + + + + +I + L + + +F + I Sbjct: 2 IALNQIDKVGDKRISELINHYESVENIFDDKEENIRELLEKKFKSQIGNFDKNEILDKAN 61 Query: 63 -SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 62 TIVEKSKNYGIGILSLFDEDYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPTNE 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 ++ L++ +++ SG+A+G+D AH A+ + ++AVLGNG++ ++P + + Sbjct: 122 SRKYSFELASKLSSLNISVVSGMAKGVDREAHLGAISSHINTVAVLGNGIDNVYPSENLQ 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + L E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T AL Sbjct: 182 IYNKLSEK-GLIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDYAL 240 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD--------- 292 QGR+V+ P G H L K GA + +ILE+ D Sbjct: 241 NQGRDVYIAPYDEKKSCYFGNHKLYKDGAKIAYNYMDILEDFDSIFSNDDDYVKMKLKYF 300 Query: 293 --------------------------------------------APENSFYSPDQQDVAL 308 + Sbjct: 301 EGGDIKSKSLKNDSIKSENNNSNNKDKKETKKEEVKDKKEKKKNKISKQNDESIISALQE 360 Query: 309 PFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 L + ++ +D V E + V V + L++LE+ G I + G Y + + Sbjct: 361 DEALLYNIIKQNDKIHIDEVIEESKMKVQAVTSMLMQLEIKGIIKQLSGKYYTIEK 416 >UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexaceae RepID=B8G3R3_CHLAD Length = 362 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 107/333 (32%), Positives = 160/333 (48%), Gaps = 13/333 (3%) Query: 1 MVDT--EIWLRLMSISSLYGDDMVRIAHWVAK---QSHIDAVVLQQTGLTLRQAQRFLSF 55 M+D ++ + + R+ H D + GL R + Sbjct: 1 MIDDTIRYYIGFNLTPGIGPLRLSRLIERCGSVAAAWHADDATMVAAGLDARSIANLRTA 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + ++ + L + YPP L P L+V G + A +A+VG Sbjct: 61 RQTLDLDVEVARLRAHGITPLAITDPAYPPLLRMIAAPPPLLYVRGTMTASDQRAIAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG R LA G+TI SGLA G+D +AH AAL+ G ++AVL G + + Sbjct: 121 TRHPTPYGREVTRRLARDLAVVGITIVSGLALGVDTIAHTAALEAGGRTLAVLACGADRV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P R+ LA ++ GAL+S++PL PP NFP RNRII+GLS LVVEA SG+L Sbjct: 181 YPERNRILAEQIV-TAGALISDYPLGTPPAPLNFPPRNRIIAGLSLATLVVEAREDSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T + AL+QGR+V A+PG I NP S GPH LI++GA ++T +++L L P Sbjct: 240 ITVQFALDQGRDVMAVPGSIFNPLSAGPHRLIREGAAIITSAQDVLGVLNLEGRSDLHEP 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 P + + + V E +DV+ Sbjct: 300 ------PLELALTAEEEAIYRVVESEPQHIDVI 326 >UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD54_9FIRM Length = 415 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 112/407 (27%), Positives = 163/407 (40%), Gaps = 48/407 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M D W L L RI + + ++ ++ +R + Sbjct: 1 MTDVVFWAWLQDAIGLGSVRADRIIREFSSPEALYGKSARELEALGMFAPKEIERLRATT 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGS 115 + E+ I D YP L P L+V+G L L + +VG+ Sbjct: 61 LDRAREQIKTAERLGCMAIGPDHPDYPEALTNIDAMPCILYVKGSLSGLSDELVITMVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G T+ SGLA GID +H ALQ +G +I +L GL+ + Sbjct: 121 RSATEYGLASAYRLSHDLAAAGCTVVSGLATGIDTASHAGALQASGRTIGLLACGLDVDY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P L +L+ GGALV+EFP +F RNR++SG++ GV+VV+A RSG+L+ Sbjct: 181 PSASGELKRRILDAGGALVTEFPFGTGVNRGSFSIRNRLLSGIAAGVVVVQAPERSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------------ 283 TAR AL+Q R+VFA+PG I +P G + L + GA +V ILE Sbjct: 241 TARYALQQNRDVFAVPGEIFDPSMAGCNKLARDGAKVVVNVYSILEEYIGRFPKRIDART 300 Query: 284 -------------------------------QFGLHWLPDAPENSFYSPDQQDVALPFPE 312 D P ++ V Sbjct: 301 VAARIKSADRNAAKPPQNAPRRIKGVKACAKPATAPKQADVPRMDDGELAKRGVTPQARA 360 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + A +G D +A AG E ++ L ELEL G+ V GG Sbjct: 361 VYAQLGARALERDELAALAGLGAAETLSALTELELTGFARVVAGGRY 407 >UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacterium RepID=B1ZLL3_METPB Length = 397 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 131/391 (33%), Positives = 176/391 (45%), Gaps = 38/391 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 WLRL+ + + + S + LT R +R + R E Sbjct: 8 RLDWLRLIRTGGIGPRSFRGLINRFGSASAALDAL---PDLTKRAGKRAVPPTRAEAERE 64 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + I YP L AT P + V G+ L +A+VGSR S G Sbjct: 65 MAAAARLGARFIAMGEAAYPKALHATETAPPLIAVRGDAAVLLKASVAMVGSRNASTAGL 124 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + G+ + SGLARGID AHKAA+ ++AVL G + I+P HA L Sbjct: 125 AFTERLARGFGEAGLVVVSGLARGIDARAHKAAVTTG--TVAVLAGGQDKIYPETHAGLV 182 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++++ GGA+V+E P+ P FPRRNRIISGLS G +VVEAA RSGSL+TAR ALEQ Sbjct: 183 DAIVDAGGAVVAEMPMGWVPRGREFPRRNRIISGLSLGTVVVEAARRSGSLITARFALEQ 242 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG +P +EG + LI+QGA LV+E E +L L+ + + P+ Sbjct: 243 GREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLEPLIAGGAPSAGGLDDRPEP 302 Query: 304 ---------------------------------QDVALPFPELLANVGDEVTPVDVVAER 330 + L+A + D +A Sbjct: 303 SGTTDYWDEIDFDGTAPVALSLFPGADEPVETGSEPEDDRTRLIARLSPTPVATDELARS 362 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G PV V T LLELEL G I G V L Sbjct: 363 TGLPVRVVQTTLLELELDGRIERHGSGTVSL 393 >UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIP5_MEIRU Length = 337 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 157/352 (44%), Gaps = 23/352 (6%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + + + V+ + + + E Sbjct: 5 LALALTPQIGPQRLQQALPTDLSVEAVADVLGPEIAAGYAR-----TLQSGLAEQERAQA 59 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 + LI E YP L P L+++GEL + +VG+R S + W Sbjct: 60 ARLGVRLIGLWEEDYPEVLRHLESPPTVLYLKGELPP-SERNIGIVGTRKASPWATAWTH 118 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 LA G+ I SGLA GID AHK AL G ++ VLG+ ++ +P ++ LA + Sbjct: 119 KVARELAEAGIGIISGLALGIDAAAHKGALDGGGYTLGVLGSAIDHFYPAQNRALAERMS 178 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 ++SEFPL PP A FPRRNRI++ S+ VLVVEA +SGSL+TA+ A E GR+V Sbjct: 179 -----VLSEFPLGTPPQAGLFPRRNRIVAAFSRAVLVVEAGEKSGSLITAKFAAELGRDV 233 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG G+ S G + LI+ GA LV E++L L + Sbjct: 234 LAVPGRPGDTFSLGCNRLIQDGAGLVLNTEDVLNALGMLAPKKQAVQ-----------LE 282 Query: 308 LPFPELLANVGDEVTPV-DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ++ + + + D +A+ G EV++ L+ LEL G + + G Y Sbjct: 283 GSEAKVYRALLELPEALPDDLAQSTGLSTGEVLSVLMMLELKGLVQSSAGRY 334 >UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN5_ELUMP Length = 372 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 8/345 (2%) Query: 23 RIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPA 77 R+ I + G++ A L E + ++ Sbjct: 26 RMIEVFGSAEMILKTSAKDLAAQGGMSEDTAANLLKEAHALDAEKEAELTNKAGGKILLL 85 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG 137 + YP L D P L+V G L A ++A+VG+R + YG R + F +A G Sbjct: 86 EDYEYPQSLKDIKDPPFVLYVRGTLEA-RGPKVAMVGTRLITPYGRRCAKKFATEIAQAG 144 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 + SGLARG+D V +A + +N + AV+G G+ +P + LA ++LE GGA++SE Sbjct: 145 CVVVSGLARGVDSVCQQAVVDINKPTWAVVGTGIGRCYPAENKALANAVLENGGAIISEL 204 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 + PP A++FPRRNRIIS LS V+++E +RSG+L+TA+ A EQG+++ A+PG I + Sbjct: 205 SFNKPPNAFHFPRRNRIISALSSVVVIIEGKVRSGALITAKLAAEQGKDILAVPGSIESE 264 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFG--LHWLPDAPENSFYSPDQQDVALPFPELLA 315 S GP+ LIK GA + E +I++ + F + E + D+ + L Sbjct: 265 QSGGPNMLIKDGAHALLETRDIIDLIPFEERFGLNEEVFEKDSVQKEILDLTETEKQFLE 324 Query: 316 NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +G +D + E VP L E+E+ G + G Y R Sbjct: 325 VIGPGEHTIDDIVEALATDVPSAAAVLFEMEIKGVLMCKDGKYSR 369 >UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XL72_HIRBI Length = 373 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 130/355 (36%), Positives = 180/355 (50%), Gaps = 4/355 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L+L+ ++ ++ + L + + F IE + Sbjct: 17 LQLLRTPNVGPMTYAQLMSRFSGDIDAVLDALPNLTTRAGKHRDFKLPSLSIIEREIDKA 76 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 + I D YP L A T P + V G++ A +A+VG+R S G + R Sbjct: 77 HKIGARFIAYDEADYPLPLNALTPPPPMICVRGKMEAFLKPGIAIVGARNASAAGRKLTR 136 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 LA G TI SGLARGIDG AH AALQ G +IAVL G++ I+P HA+L ++L Sbjct: 137 DISHELAKSGYTIVSGLARGIDGEAHAAALQT-GHTIAVLAGGVDAIYPPEHAKLYDAIL 195 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 E+ GA+VSE PL A +FP+RNRII+GLS VLV EAALRSGSL++AR ALEQGREV Sbjct: 196 ER-GAIVSESPLGYIATAKDFPKRNRIITGLSMAVLVAEAALRSGSLISARVALEQGREV 254 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ-DV 306 A+PG + + G + L++QGA LV E+++ L+ + + PE + DV Sbjct: 255 LAIPGSPLDERTRGSNGLLRQGAWLVENAEDVIAALENSIPPMLAEPEAPTFETLSMIDV 314 Query: 307 AL-PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L L + T +D + P+ EV L ELEL G GGYV Sbjct: 315 SLSTIQSLTMALSPTPTHIDELVRVVRAPLREVNAALTELELDGIAQTHAGGYVS 369 >UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacteria RepID=C3JBR0_9PORP Length = 368 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 115/368 (31%), Positives = 168/368 (45%), Gaps = 12/368 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF-----LSF 55 M L L I + + RI V I + G+ +R LS Sbjct: 1 MGKAAYLLALSRIEGVGAITLRRILDAVDDVCDIFSNPAILEGVAPALYRRVVSHLSLSE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +S + + ++ + YP L D P A F G ALHS ++VVG Sbjct: 61 LLESAKREVEEAKRKHIDTFGLGDVDYPQLLAECADPPPAFFYFGNRDALHSPHCISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +R S YG + + E LA + + + SGLA GID AHK AL + +I VL +GL+ Sbjct: 121 TRRASRYGLKAVEVLLEDLANKLPDLVVISGLAFGIDVKAHKVALDLGIPTIGVLAHGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P H +A ++++GG L SE+ ++F RNRI++GLS LVVE+A R G Sbjct: 181 RIYPAAHRNIAIEMVKKGGLL-SEYSWGSKVERHHFVGRNRIVAGLSHATLVVESADRGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLP 291 SL+TA A GREVFA+PG I + S G + +I AI + I+ L +G Sbjct: 240 SLLTAAMASGYGREVFAVPGRITDSTSVGCNRIIASMQAIPAVNADSIISVLGWGKSNGG 299 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + +S Q P L+ V +E + + R G E+ +L LE G+I Sbjct: 300 EEESSSSLFVPQDLPDDPVLRLI--VEEETIHFNDLLMRLGMSAAELSNKLFTLEFDGFI 357 Query: 352 AAVPGGYV 359 +PGG Sbjct: 358 KPLPGGLY 365 >UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBJ9_9FIRM Length = 385 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 161/353 (45%), Gaps = 13/353 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-----FLSFPR 57 W+ +S + L ++ S + ++ QR Sbjct: 18 PYRYWMTCLSGAGLGNRSKRQLLDCYKSPSAVYRASKEELDKLGFLRQREVDALIFQRGS 77 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVV 113 + + + L+ D E YP L D P LF G + + S AVV Sbjct: 78 WDLREEYERFLEADMGLVTLDMEGYPANLRMLHDAPFGLFFRGRISSGVSSGSSRLAAVV 137 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR S YG+R L I SG+ARGIDG+A + L G +IAVLG G + Sbjct: 138 GSRTPSAYGKRVAEDLSAILTDYHYQIVSGMARGIDGIAQTSCLDTGGQTIAVLGCGADI 197 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+ + L ++E G L S++P PL+ +FP RNRIISGL+ VLV+EA RSGS Sbjct: 198 VYPKENWILYDRIVET-GCLFSKYPPQTAPLSRHFPARNRIISGLASVVLVIEARRRSGS 256 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPD 292 L+TA ALEQG++V+ LPG I +P S G + L+ QG A +T+ ++++++L+ Sbjct: 257 LITADFALEQGKDVYTLPGRITDPMSAGCNELLHQGAAQPITDYDQLIDDLELIAGMGHF 316 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 P + +L + +D + +R+ + V L EL Sbjct: 317 QPREDLRR--LPPLTREQEKLYQCLDFYPMDLDQLVKRSELDYLQAVRVLTEL 367 >UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella RepID=D1VYZ9_9BACT Length = 377 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA------VVLQQTGLTLRQAQRFLSFPRKSIE 61 + L I+ + M+++ + + + VL L Q+ + L P E Sbjct: 11 IALTRINYFHLTGMLQLYRRLGSATAVIEHRRNIRDVLPDASPKLVQSLQQLDEPLHRAE 70 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + + E YP +L D P LF +G ++ + VVG+R ++ Y Sbjct: 71 IELQWDLENGVMPLCMNDENYPQRLRQCDDAPLMLFYKGNINLNQRRVICVVGTRRNTVY 130 Query: 122 GERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L + + SGLA G+D +AH+ ALQ ++ VL +G++ ++P RH Sbjct: 131 GEDLIRRFMRELRQLCPQLLVISGLAYGVDIIAHRQALQNGYPTVGVLAHGVDYLYPARH 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 191 KQTADEMVKKGGLL-TEFLTQTNADKVNFVRRNRIVAGISDACVVVESAAHGGGLITASL 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLH-WLPDAPENS 297 A REVFA PG IG+ SEG + LI+ A L++ ++ ++++ + L A + Sbjct: 250 ARTYNREVFAFPGNIGSQYSEGCNNLIRDNVAGLISNADDFVKSMNWDDDVKLQRAQQVG 309 Query: 298 FYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ ++++ + +++++ +A P+ + L LE+ G + A+PG Sbjct: 310 IERQLFPDLSAEERQVVSALKKHNDLQINMLSVQADIPIAHLTAILFSLEMKGVLKALPG 369 Query: 357 GYVRL 361 G L Sbjct: 370 GMYHL 374 >UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZ86_9CLOT Length = 379 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 98/372 (26%), Positives = 173/372 (46%), Gaps = 10/372 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFP 56 M + +L L + + +I + I + + + +++ Sbjct: 7 MDKRDAYLWLYGVVGCNNLTIDKIEREMPGTKDIFDFSEKTIYNLERVNDKVKSSIINYK 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +++ L + N + YP +L D P LF +G L AL + +VG Sbjct: 67 NNMNVDDYKELLYKKNVKYSVIGDDDYPYKLANIYDAPKVLFYKGNLSALGKHFSIGIVG 126 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ G I SGLA G+D ++H+A+L G + VLG+G++ Sbjct: 127 SRKPTVYGAECTKKLARELSDYGADIISGLAIGVDAISHEASLLGKGKTFGVLGSGIDNP 186 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + L +++ GGA++SE ++ + F RNRIISGLS GV++VEAA +SG+L Sbjct: 187 LPKTNIWLMNKIVDSGGAVISEHGINKKVHPHYFANRNRIISGLSDGVIIVEAAKKSGAL 246 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA A EQGR VFA+PG I + S+G H LIK+GA L +++LE + + Sbjct: 247 ITAEFAAEQGRSVFAVPGSIFSENSKGCHRLIKEGAKLTENIDDVLEEFEVFKFKTLEKE 306 Query: 295 ---ENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + + D+ L+ + + +D + + + ++ + +L+L Sbjct: 307 IKYDTIEKADINADLEDDENILVDIIRKNGSIDMDSLCLKTKFGIEKINPIVEKLKLYDL 366 Query: 351 IAAVPGGYVRLR 362 I + G ++ Sbjct: 367 IFEIEKGVYSMK 378 >UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0X6_9PROT Length = 369 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 110/360 (30%), Positives = 163/360 (45%), Gaps = 11/360 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 WLRL + + R+ + + + + G+ + S E Sbjct: 9 WLRLSMVHGIGPMLGRRLLAAIGGIEALWSATGDELRAVDGMGQQLVASLSSTHLSQAEQ 68 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWY 121 + ++ D +P L D P LF G+ L H LA+VG+R S Sbjct: 69 IVKQCAAQQIGILCPDDARWPVALANVEDAPLILFYRGDPVCLSHLPMLAMVGARRASRE 128 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R + + I SG+A GID AH AL+ G++IAVLG GL + + + Sbjct: 129 GRVLTRRWSRYFTAHDIAIVSGMAFGIDAAAHAGALEEQGITIAVLGCGLLALTEEQQRQ 188 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + + + G ++SEF +FPRRNR+I+GL++ +V+EA +RSGSL+TAR A Sbjct: 189 V--EAIAERGCVISEFLPAQSARPEHFPRRNRVIAGLAQATVVMEADIRSGSLITARLAG 246 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GR+VFA+PG + G H LI+ GAIL+ EE+L L Y P Sbjct: 247 EYGRDVFAVPGSVLADNHAGCHRLIRDGAILLERAEELLVQLGLHADKTTQLHAGKQYHP 306 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + E +D++AE G +PE+ LL LEL G I +PG L Sbjct: 307 ----ADAEEAGILMAMRGEAVHLDLLAETCGLTLPELSPILLRLELQGVIERLPGSRYLL 362 >UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGN8_9FIRM Length = 361 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 169/360 (46%), Gaps = 12/360 (3%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFL-SFPRKSIESSLC 65 I L ++ I +L G+ + A+ L S E L Sbjct: 2 SEIKGLGSVTCRKLLQVFQTPEEIYRAAKGDLLSVAGIGEKTAEIILGSRSLSPAERILE 61 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + + L+ + YP + D P L+ GEL S +AV+G+R + YG++ Sbjct: 62 KMARLEIKLLTIEDVCYPGEAANLADAPPVLYYRGELREDSS-GVAVIGARRCTAYGKKV 120 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + E LA V + SG+A+GIDG AH A + G ++A LG+GL+ +P H L + Sbjct: 121 AKEAAEFLAKNEVPVISGMAKGIDGYAHTACINAKGYTLAFLGHGLDLCYPPEHLELMEA 180 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 ++E GA++SE+P P FPRRN ++S S +LVVEA SG+L+TA+ A EQG+ Sbjct: 181 IVE-NGAVISEYPPGTPAKQVYFPRRNYLLSAWSHKLLVVEAGYNSGALITAKVAREQGK 239 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ- 304 EV A+P I N S G + LI GA + +P+++LE + + + + Sbjct: 240 EVLAVPNGIYNRESYGTNRLIADGAKIFIKPDQLLEMPRENVSVDRSVKQKRKSKVVAEI 299 Query: 305 ----DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +++ +G E ++ +A + + L +EL G + +PGG R Sbjct: 300 VSVVEDSAYERQIIELIGSEEVSIEKLALSFTENRKSFLEALSVMELEGKVKRMPGGMYR 359 >UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteobacteria RepID=Q0C098_HYPNA Length = 371 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 164/359 (45%), Gaps = 8/359 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 WLRL ++ ++ A + + R + P I Sbjct: 12 RLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAAR-GKSITIPPADVIARE 70 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + + ++ + YP L A P L + G A+VG+R S G Sbjct: 71 IDAVAKYGARIVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAGR 130 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + R L G TI SGLA GIDG AH A+L ++AVLG G++ ++P +H RL Sbjct: 131 KIARDMAAALGKAGYTIVSGLALGIDGEAHAASLSTG--TVAVLGGGIDHVYPPKHDRLY 188 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 A + Q G +VSE P A +FPRRNRII+GL++G +VVEAA RSGSL++AR A EQ Sbjct: 189 AE-VAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLISARVANEQ 247 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP-- 301 GREV A+PG +P + G + LI+ GA LV ++LE L AP Y Sbjct: 248 GREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAAH 307 Query: 302 --DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + + P+D +A AG L+ELELAG PGG Sbjct: 308 GGGEAIPPSELARVREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGM 366 >UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms RepID=B9P8E5_POPTR Length = 371 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 176/365 (48%), Gaps = 11/365 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA---VVLQQ---TGLTLRQAQRFLSFP 56 + WLRL + + R+ + A L++ + + Sbjct: 10 EVAAWLRLTATPGVSALAGRRLLAKFGLPQTVLAQNLASLREVVDAKVACVLNAPLDAAM 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I+ ++ WL H ++ YP LL D P L++ G+ L L +VG+R Sbjct: 70 SALIDRTVAWLADARHAMVTMADAGYPAGLLDLADPPLLLYINGDPARLAGPALGMVGAR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R + F + G T+ SGLA GID AH AL+ G ++AV+G G + ++P Sbjct: 130 KATTQGARDAQAFASAFSNAGWTVVSGLALGIDAAAHAGALEGPGGTVAVIGTGADIVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA +++ GGA+VSEF L P L +FPRRNRII+ LS+GVLVVEAA RSGSL+T Sbjct: 190 GRHHALAHRIVDAGGAIVSEFALGTPGLPNHFPRRNRIIAALSRGVLVVEAAERSGSLIT 249 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GREVFA+PG I + G H LI+QGA LV P ++ E P + Sbjct: 250 ARLASEIGREVFAMPGSIHAELARGCHKLIRQGAKLVETPADVFEEFG-----DPGGVAS 304 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 P +P A + + D + ER+G LLELEL G + + G Sbjct: 305 VAPVPVPDSAPVPGDPFGAALAYDPVTFDALCERSGLAPHMAAAMLLELELGGTVERMAG 364 Query: 357 GYVRL 361 R Sbjct: 365 NRYRR 369 >UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Selenomonas RepID=C4V2Y4_9FIRM Length = 369 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 157/339 (46%), Gaps = 19/339 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQA-------QRFL 53 M D L+ + M ++ + I ++ + + Sbjct: 7 MGDRWYLAALLRCPQVGSVRMRKLLAVYSSAKEIWSMSAHALRAAGVLTDVVADVLAQHI 66 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 E + + ++ + + YP L D P L+ G L ++++V Sbjct: 67 QSDPHLPERLEESCRRLDVAVVTMEDKRYPIVLREIFDPPLVLYCRGTL-LPDVRRISIV 125 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YGE F E LA GVT+ SG ARGID AH+ AL+ G ++AVLG G++ Sbjct: 126 GARKFSGYGEAAALEFAEHLAAAGVTVVSGAARGIDTRAHRGALRS-GRTVAVLGCGVDV 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + RL A + GGA++SE+ PL FP RNRIISGL++GVLVVEAA RSGS Sbjct: 185 AYPSENRRLLAEICTSGGAVLSEYAPGTQPLPMFFPARNRIISGLAEGVLVVEAARRSGS 244 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA AL +GREV+A+PG I +P S G H LI+ GA LV P EILE + Sbjct: 245 LITAEMALSEGREVYAIPGSIYSPQSGGCHNLIRAGARLVESPREILEEMHLVESPRRSV 304 Query: 294 PENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA 331 + + + + +D + + Sbjct: 305 RTQ---------LTPEEAHIYQVLSFDHALTMDEIIDSL 334 >UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q945_9SPIR Length = 426 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 98/417 (23%), Positives = 169/417 (40%), Gaps = 60/417 (14%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRK----S 59 + L I + + + + +I + L + + +F + Sbjct: 11 YLIALNQIDKVGDKRISELINHYESVENIFEDKEENIKDLLKKKFKSQIGNFYKNEILDK 70 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 71 ANEIVNKSRDYGIGILSLFDEEYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPA 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 ++ L++ +T+ SG+A+G+D AH A+ + AVLGNG++T++P + Sbjct: 131 NESRKYSFELASKLSSLNITVVSGMAKGVDREAHLGAISSLVNTAAVLGNGIDTVYPSEN 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 ++ L+E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T Sbjct: 191 LKIYNKLIEK-GIIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDY 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD------- 292 AL QGR+V+ P N G H L K GA + ++ILE+ D Sbjct: 250 ALNQGRDVYIAPYDEKNNAYFGNHKLYKDGAKIAYGVQDILEDFDSIFSNDDDYLKMKLK 309 Query: 293 ----------------------------------APENSFYSPDQQDVALPFPELLANVG 318 + + EL++N+ Sbjct: 310 YFEGGDISNKSKEKNKKEENREKKENKKYKEQTAEINKKHDKKNDNKIKEKNNELISNLN 369 Query: 319 DEV------------TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 +E +D + E + V + L++LE+ G I + G Y + + Sbjct: 370 NEETSLYNIIKKSDKIHIDDIVEESNIKVHTAASVLMQLEIKGIIKQLSGKYYTIEK 426 >UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus RepID=C7HUU2_9FIRM Length = 359 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 104/361 (28%), Positives = 181/361 (50%), Gaps = 9/361 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-FPRKS 59 M ++ L I +L ++ + + D L+ + ++ S ++ Sbjct: 1 MDKKDLLLYFNFI-NLQNKIILDFCENLDMDNFFDLDRKIFENLSKKNKEKIFSSKNLEN 59 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ + + + + YP L D P + +G L +A VG+R + Sbjct: 60 FKAYRQKVFNGPYKISTIYDDNYPINLSYIDDRPALFYYKGNLEKEDKNAIAFVGARKCT 119 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG+ + E + SGLA GID ++HK +L+ N +I V+G+GL+ I+P+ + Sbjct: 120 DYGKWACKKIVEGFKDTNIRTVSGLAYGIDAISHKVSLENNIKTIGVIGSGLDIIYPKAN 179 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + E+ GA++SEFPL+ PP AYNFPRRNRIISGLSKGV V+EA +SG+++T Sbjct: 180 KYLYEKI-EEKGAIISEFPLETPPNAYNFPRRNRIISGLSKGVCVIEAKEKSGTMITTNF 238 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 AL+QGREVF LPG I + S+G + LI++G+ LV + +I++ ++ + + Sbjct: 239 ALDQGREVFCLPGNINSIYSKGCNKLIQEGSKLVMDASDIIDEIEDFKKINEKKTKLNLD 298 Query: 300 SPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D+ + ++ + D+ + D +++ + EV L+ LEL +I + Sbjct: 299 GLDKDTLN-----VVKYIIDKPSSNADEISQNLCMSIEEVNYILIFLELNDYIENMGNNE 353 Query: 359 V 359 Sbjct: 354 Y 354 >UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=Deinococcus RepID=Q1IVU7_DEIGD Length = 358 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 116/366 (31%), Positives = 171/366 (46%), Gaps = 23/366 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRF-LSFPR 57 + + L L L + ++ A L GL R + PR Sbjct: 9 ELQALLTLRFTPGLGPRRIEQLRRHFGSAEAALAAPLTALRDVPGLDARSVAALGTAKPR 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--SFQLAVVGS 115 + E+ L + L+ YPP L A D P L+V+GEL + +VG+ Sbjct: 69 EQAEAELVKARKEGVTLLGRGLPGYPPALEALGDPPPVLWVKGELPDFPVVPRAVGIVGT 128 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S + R LA GV + SGLARGID AH A+++ G S+ VLG+ +N I+ Sbjct: 129 RGASPHALSLTRTLAADLARAGVIVISGLARGIDTAAHAASVEAGGHSVGVLGSAVNVIY 188 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A LA L LVSE+PL P ++FP RNR+I+ LS +VVE L+SG+L+ Sbjct: 189 PSENAHLARHLT-----LVSEYPLGTGPAQHHFPTRNRLIAALSAATVVVEGELKSGALI 243 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V A+PG G+P + GPH L+++GA+L ++IL L +G Sbjct: 244 TATHALECGRTVCAVPGRAGDPRAAGPHRLLREGAVLTETAQDILNELGWG--------- 294 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D+ A + +D + G +P++ T L+ L+L G V Sbjct: 295 -EAPAAPTSDLPPEQARTYAALT-TPATLDDLQAATGLTLPDLQTALVMLQLLGLAEEVG 352 Query: 356 GGYVRL 361 G + R Sbjct: 353 GRWARR 358 >UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA39_9RHOB Length = 397 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 25/357 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ ++ + + + + + +++ R S + E Sbjct: 15 TQRLAWLRLIRSENVGPRTFRELLNHFGSAQAALDALPELSRRGGKKSYRLFSQDK--AE 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-----FQLAVVGSR 116 + L L + LI YPP L P L V LA++G+R Sbjct: 73 AELAALYKIGARLIALGEPAYPPLLRHIDAPPPLLAVRARDPLQQELTGTQKTLAIIGAR 132 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G ++ L+T+G TI SGLARGID AH AAL +IA G++T++P Sbjct: 133 NCSAAGAKFATQLAGELSTQGFTIISGLARGIDSAAHHAALSSG--TIAAFAGGIDTVYP 190 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + L +S++ GA +SE P+ P A +FPRRNR+ISG+S GV+++EAA +SGSL T Sbjct: 191 KENLELFSSMIATNGAAISEMPISWQPRARDFPRRNRLISGMSLGVILIEAAEKSGSLYT 250 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR ALEQ RE+ A+PG +P S G + LI+QGA LV +++L+ ++ + Sbjct: 251 ARYALEQNREILAVPGSPLDPRSVGANKLIQQGAALVQSVDDVLDIMEPKISMSLPLHQG 310 Query: 289 --------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 D+P+ + SP ++ + + D + G + Sbjct: 311 IEEPTSNWPKLDSPDTNSPSPPLNANEQDRLAVIDALSETPIDQDELLRFTGVSLQT 367 >UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAQ3_EUBR3 Length = 359 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 11/357 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK-SIES 62 L S++ + + + + T + L +E Sbjct: 5 YWLTSLTDISNAKKKLLHDCSITAEKLFFMPKNELFDILFFTDDDRKIILESRASYDVEK 64 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +Q + + + E YP +L + P +LF G L +A+VG+R S YG Sbjct: 65 EWILFQQKDIGFVTMEDEAYPDKLRNIHNPPYSLFYIGALPDKSRKSVAIVGARGRSAYG 124 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ L+ +G+ I SG+ARGID AH L+ G + AVLG+G +T +P+ + L Sbjct: 125 CEVAKVLAAALSRQGIQIISGMARGIDRDAHMGCLEAGGNTYAVLGSGADTCYPKENRFL 184 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GG ++SE P FP RNRIISGLS V++VEA RSGSL+TA A+E Sbjct: 185 YDKIKLSGG-IISELMPGTDPQKMFFPMRNRIISGLSDIVVIVEAKKRSGSLITADFAME 243 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++V+ +PG I + S G + LIKQGA ++ +E + ++ E + Sbjct: 244 QGKDVYVIPGRITDTLSYGCNSLIKQGAGIIYNIDEFVSDITMTGFT-----ECTQMDFR 298 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + + + + ++++ + E+ L +L G++ Y Sbjct: 299 KNILDKKEALVYSLLDFCPIAIGTLSQKVPYELSELFEVLEDLIQKGFVKETIPNYY 355 >UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KWN4_9FIRM Length = 300 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 11/300 (3%) Query: 67 LEQPNHHL----IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +E+ N L + E +P +L D P L+++G L + ++G+R + YG Sbjct: 1 MEKKNIELSIRELLPFQEDFPKRLSEIPDSPECLYLKGFLPKEGEHTVGIIGARDGTEYG 60 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R +TLA +G+ I SG+A GID AH+ AL+ G + AVLG G+N +P + RL Sbjct: 61 KDIARSIAKTLAKKGIGIVSGMAYGIDSAAHEGALEGKGKTYAVLGCGVNICYPSCNFRL 120 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ E+ G ++SE+PL PPL ++F RNR+ISGLS +LVVEA +SG+ +T ALE Sbjct: 121 YENI-EKNGGILSEYPLHSPPLPHHFVERNRLISGLSDVILVVEAKEKSGTFITVDRALE 179 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++VFA+PG I + S+G + LI++GA + T +IL E P Sbjct: 180 QGKQVFAVPGRIVDRLSQGCNRLIREGASVCTSAGDILSYFSLEAEKEESKEEEIKNFP- 238 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +G E + E P + L+ELE+ G+ V Y R + Sbjct: 239 -----KEKRRIYLALGFESKHFQSLQEELKLPNYMLHRYLIELEVEGYCECVQAAYYRRK 293 >UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYZ2_9SPHI Length = 371 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 182/371 (49%), Gaps = 11/371 (2%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSF 55 M ++ ++ + L I + G ++ + + A +L+ + + + Sbjct: 1 MNNSSLYSIALNLIDKVGGVKARQLLSYCGSAEAVFKTPKAKLLKIPMVGNKIVSLIMQK 60 Query: 56 P-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + E+ + + + ++ YP +L D P +++G+++ +A+VG Sbjct: 61 DILQQAEAEVEKAYKQDVQIVAYTDAHYPVRLKQYADAPFVFYIKGKVNLNAERAVAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +RA S YG+ + + L I SGLA GID AH+A+L+ +I V+ +G++ + Sbjct: 121 TRAASEYGKTFTEELVKELKPYQPLIVSGLAYGIDIAAHQASLKYGLPTIGVMASGIDVV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H A +++Q G +++E P A FP RNRII+ L+ V+VVEA + G+L Sbjct: 181 YPTPHLGTARQMVQQQGGVMTEARFGTQPDARKFPARNRIIAALADAVVVVEAKVSGGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A + ++VFA+PG I SEG + LIKQ A L+T+ +++ + + L+ + Sbjct: 241 ITANIANDYHKDVFAVPGDIHRKTSEGCNNLIKQHKAHLMTKAKDVAYIMNWELNGKNKS 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV---TPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + E++ + + +D ++ + P+ +V LL LE+ G+ Sbjct: 301 VQQSLLFNELPE-NAEEKEIVVLLQKQPKKTLSLDEISWQLKMPLSKVSACLLNLEIQGY 359 Query: 351 IAAVPGGYVRL 361 + ++PG L Sbjct: 360 LKSLPGKKFTL 370 >UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN9_9CLOT Length = 374 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 178/370 (48%), Gaps = 11/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI----DAVVLQQTGLTLRQAQRFLSFP 56 M + E++L L SI + +++ + K + + +L+ L + + + + Sbjct: 1 MQEREMYLFLCSIYRISQEEIDILKAQFGKLEVLMYLDEKEILKNKNLNSKLLKNIVKYR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVG 114 IE+ LE+ + + + YP L P LF +G++ L H +AV+G Sbjct: 61 SHSRIENIKGVLEEKDIQYVCFSDDDYPESLKHIQMPPPILFYKGDISILDHRNNIAVIG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SRA + YG R + + L+ G+ I SGLA GID AH A + G ++AVLG+ ++ Sbjct: 121 SRAPTNYGLYCVRKYAKELSDIGMDIVSGLALGIDSEAHLACMNGRFGKTVAVLGSPIDN 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I P R+ ++A +LE GG +VSEF L NF RNRIISGLS VLV+EAA +SG+ Sbjct: 181 ILPSRNRKIADKILENGGIIVSEFFLGSKVHPLNFSFRNRIISGLSVAVLVIEAAQKSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 T A +QG+ VFA+ G I +P S G +I +GAI T E I + L+ Sbjct: 241 KRTFDYAGDQGKTVFAMTGRINDPKSRGCIDMIIEGAIPFTSVENIFRDKSVFLNAKEFC 300 Query: 294 PENSFYSP---DQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAG 349 N+ D + + E+L + + +D + G + + + + EL + Sbjct: 301 TLNNCKDSIEYDIKSLNYEKKEILELIKRQGNIKIDDICNYTGMDIKTINSNVNELLIDD 360 Query: 350 WIAAVPGGYV 359 +I + Sbjct: 361 YIIEMENKTY 370 >UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIX1_9BACT Length = 362 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 16/345 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI----DAVVLQQTGLTLRQAQRFLSF- 55 M + WL L S L + + + Q L + F Sbjct: 1 MERYKAWLCLKSAPLLGTKGTLELLQSFPDPQEFVGNPSHPLYQNGKLKPATIKHLREFT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVG 114 + + L +E+ + YP L D P L+ +G+L L +AVVG Sbjct: 61 LPEDNKRILTLMEKHQLQYLCLTDPDYPAALKEIFDPPLILYYQGDLTGTLKDLCIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG R L +GV + SGLA GID +AH+ AL+ +IAV +GL+ I Sbjct: 121 TRKPTSYGLEMCRKLLSPLCAKGVNVVSGLAMGIDTIAHQTALKAKAKTIAVFASGLDNI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + LA ++ E GALVSE+ +NFP RNRIIS L+ VLVVE +L SG++ Sbjct: 181 YPPMNKTLAENICE-NGALVSEYEPGSKLERWNFPTRNRIISALANAVLVVEGSLNSGAM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA+ A+EQ + ++ALPG I N ++GP+ LI+QGA L++ ++L +L P Sbjct: 240 LTAKFAIEQNKPLYALPGNINNRNAQGPNLLIRQGATLISSANDLLMDLGL-------VP 292 Query: 295 ENSFYSPDQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPE 337 +++ L + D + G + Sbjct: 293 SPKEQMELIPELSSEEQTLYDILSSAQKELTFDEFMLKTGLGFGK 337 >UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CHW7_9FLAO Length = 412 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 107/410 (26%), Positives = 166/410 (40%), Gaps = 51/410 (12%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ---AQRFLSF 55 M++ E+ +RL I L + S + + G LR + Sbjct: 1 MIEKELIALIRLQLIPGLGPIGARNLIAICGSPSAVFSQTKMLAGNGLRHNLLSSLEEEA 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L + E+ + YP L D P L+ G ++ ++VVG+ Sbjct: 61 YLRRAQAELRFAEKRGARCLGCLDPDYPAGLRECADSPLVLYTRGRINFGRHPLVSVVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG F +A I SG A GID A A++ +IAV+ +GL++++ Sbjct: 121 RSMTGYGRETCEAFIAGIAPANPIIISGFAYGIDICAQSTAMRYGLQTIAVMAHGLDSLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + +L+ GG L +EFP P +F RRNR+I+G+S +VVE+ R GSLV Sbjct: 181 PASHRKYRDALVANGGFL-TEFPSGTPAEPGHFLRRNRVIAGMSPATVVVESGERGGSLV 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAP 294 TA A REVFA PG + +P S G + LI+ Q A L+T E L + + P+ Sbjct: 240 TADLAFGYDREVFAFPGRVSDPQSAGCNALIRTQKAQLLTNAREFLLAMDWEEAQSPETK 299 Query: 295 -------------------------------------------ENSFYSPDQQDVALPFP 311 N +P D+ Sbjct: 300 GSGGLVDAGSLSKTRNPVETGNFRETKNPAETGNPGVKGGLPNPNRAVNPVPGDLDPTEN 359 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 L + +D VA R V E V+ L LE+ G + ++PG R Sbjct: 360 TLARCLAESGCMHLDEVAVRCQLGVSEAVSGLFNLEMRGLVRSLPGKLFR 409 >UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH2_PETMO Length = 330 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 16/318 (5%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + + ++ I SL ++ I E YP L D P L+ G+ Sbjct: 29 SPTLFKEEFEENKRKIVQSLDKIKDLGI--ITYWDEEYPDLLKNINDPPVILYYFGDPSL 86 Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 L S +++VG+R + YG+ + L++ T+ SG+A GID +A + A +I Sbjct: 87 LKSKTVSIVGTRKTTDYGKSICIEITKALSS--YTVVSGMAYGIDSIAQRNAK----KTI 140 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVLGNG++ I+P+ + L + E+ G ++SE+ Y FP RNRII+ LS+ +V Sbjct: 141 AVLGNGIDIIYPKSNESLYNKIKEE-GLIISEYFPGTRATKYTFPYRNRIIAALSEKTIV 199 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 VEAA +SGSL+TAR AL+ GREV A+PG I S G ++LI GA + + + E Sbjct: 200 VEAAKKSGSLITARYALDYGREVLAVPGDITRLNSYGTNYLIYSGATPIISIQHLKELFG 259 Query: 285 FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 EN +P++ ++ ++L + + +D + E + V +++ +++ Sbjct: 260 I----TNLEVENYDENPEEMEL---KEKILKLINEGNNNLDSLCETLKEDVSAILSTIMQ 312 Query: 345 LELAGWIAAVPGGYVRLR 362 LE+ G ++ G Y L Sbjct: 313 LEIDGKLSQENGTYFTLN 330 >UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacterium RepID=C5VCW3_9CORY Length = 405 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 158/382 (41%), Gaps = 23/382 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-LTLRQAQRFLSFPRKSI 60 + W L + ++ + + I + ++ L A+ + Sbjct: 10 ERRQAWAYLSRVFEGPSRELTNLLNNRRDPEAIAQGIRRRESWLGDILARTHTRYQDDRA 69 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQ----------------LLATTD---YPGALFVEG- 100 ++ L + L+ D +P + L + + P AL+V G Sbjct: 70 KADLTTMAAIGGRLVTPDDPEWPAEPLDAAFRFAASGKSDTLRSYQEDAVPPHALWVRGS 129 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 L L + +++VGSRA S YG RL L TI SG A GID AH L Sbjct: 130 NLRQLCAQAVSIVGSRAASNYGSHAARLISAGLIDHHWTIISGGAFGIDSAAHTEVLARG 189 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +IAV GL+ +PRR+ + ++ + GALVSE+P P + F RNR+I+ LS Sbjct: 190 GTTIAVQACGLDRPYPRRNHDMLTTIAQHNGALVSEYPPGATPQRHRFLTRNRLIAALSS 249 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +++EAA RSG+L T A G+ A+PGPI S G H I+ G A +V +E+ Sbjct: 250 GTVIIEAAWRSGALNTLSWAAAFGKITMAVPGPITTAQSLGCHERIRNGDAAMVCSADEV 309 Query: 280 LENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + L E F + Q ++ + G P D +A AG + Sbjct: 310 RQLLAKIGDIDVGEQYEMQFAATPVQKLSRNEMRIYDATGPRPIPTDQLAHDAGLTIGLT 369 Query: 339 VTQLLELELAGWIAAVPGGYVR 360 V LL L G + + R Sbjct: 370 VHLLLSLAQQGLVERNGNAWQR 391 >UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMX7_9FIRM Length = 365 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 169/364 (46%), Gaps = 22/364 (6%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-------QAQR 51 M + L L + + + + + +R Q Sbjct: 1 MDARQDFYLAALAQCPGLGSRRLGLLLETGRDAVSLWQMPALEMSRLVRMPQGLVEALQS 60 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 F ES +Q HL YP L P L+ G L +A Sbjct: 61 FRRTHPDLPESLAESCQQRGVHLCTIRDASYPYLLKEIFSAPPVLYFRGTLEPEARR-VA 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VGSR S YGE F E LA G+T+ SG ARGID +H+ AL+ G ++AVLG G+ Sbjct: 120 IVGSRRLSPYGEALALEFGEQLAAAGLTVVSGAARGIDTRSHRGALKT-GRTVAVLGCGI 178 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P + RL + E GGA++SE+ V PL FP RNRIISGLS+G LVVEAA RS Sbjct: 179 DVAYPAENRRLLMEIAESGGAVISEYGPGVQPLPAFFPARNRIISGLSEGTLVVEAAARS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TA AL +GREV+ALPG + + SEG H LI+QGA LVT+P +ILE++ Sbjct: 239 GSLITAELALGEGREVYALPGSVFSKMSEGCHHLIQQGASLVTKPCDILEDMGLV----- 293 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA-GQPVPEVVTQLLELELAG 349 + Q+ + + + + D + +P + LL++EL G Sbjct: 294 ----QKVAAKKQKSMTPDERRIYQVLSFDHPLSADEILMSLPDGEMPSLSFTLLQMELKG 349 Query: 350 WIAA 353 I Sbjct: 350 LIIE 353 >UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFG2_9BURK Length = 448 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 116/302 (38%), Positives = 164/302 (54%), Gaps = 7/302 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------ 56 + WLRL L + + + I + +A + Sbjct: 10 ELAAWLRLSLAPGLKPAALRLLLSAFGLPAAILQQEHETLAAIAGEAAAHAALAPTGPEF 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + W E P + ++ D YPP LL D P L+++G L LH +A+VGSR Sbjct: 70 DAQLDAVIAWRELPGNQIVTLDDPAYPPALLTMPDPPPLLYIKGRLELLHRRAVALVGSR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F T++ GVT+ SGLA+GIDG AH+ L G ++AV+G G + ++P Sbjct: 130 SATPQGLEDAERFARTISAAGVTVVSGLAQGIDGAAHRGGLDGIGSTVAVIGTGADLVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + Q GA++SE+PL P A NFP+RNR+I+GL GVL+VEAA+RSGSL+T Sbjct: 190 SAHHALARQIAAQ-GAILSEWPLGTPARAANFPQRNRLIAGLVSGVLIVEAAMRSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GR++FALPG I P S G H +IKQGA LV P+E+LE L F AP + Sbjct: 249 ARLANEMGRDIFALPGSIHAPLSRGCHRMIKQGAKLVETPDEVLEELGFAKAAPISAPAS 308 Query: 297 SF 298 Sbjct: 309 PA 310 >UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus RepID=C5D8V4_GEOSW Length = 294 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 7/289 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAH---WVAKQSHIDAVVLQ-QTGLTLRQAQRFL-SFPRK 58 E + L + R+ + + + L+ + L+ +Q +F Sbjct: 6 RERLIHLHHCRGAGWKTIHRLLEIDPTFSSVFTLPSSALRTRIPLSSQQYTQFFQDLHSP 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 IES + + N H+I YPP L P L+ +G + L S +++VG+R Sbjct: 66 HIESMIKTYKDKNIHVITIFDSDYPPLLKHIYKPPWVLYAKGNIRLLSSFKMISIVGTRQ 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + R L I SGLA GID +AH+ ++ G +IA++ G I+PR Sbjct: 126 PTKEGIQSLRQLVPPLVANDWVIVSGLAVGIDTLAHEMTIENGGHTIAIIAGGFEHIYPR 185 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ RLA L+ G ++SE P V P ++FP RNRIISG+S G +VV+A RSGSL+TA Sbjct: 186 QNKRLADQLM-GGHLILSEHPPHVRPQKWHFPLRNRIISGISLGTIVVQAKERSGSLITA 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 ALEQGREVFA+PGPI S+GP+ LI+QGA LV +I E + Sbjct: 245 LLALEQGREVFAVPGPIFLEQSKGPNMLIQQGAKLVHSATDIFEEFSYI 293 >UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacteraceae RepID=B5ZK58_GLUDA Length = 395 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 124/379 (32%), Positives = 175/379 (46%), Gaps = 25/379 (6%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 LRL + ++ A + + R + P + I + + Sbjct: 11 LRLARTEGVGPVGYRKLLLDYGDAERALAALPARARAAGRARALRI-PPAEDIAAEIDGT 69 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 +I YPP L D P AL V G+ L +A+VG+R S G R Sbjct: 70 MALGGRIIMLGDPDYPPLLAGIHDAPPALSVLGDAALLAGCGIAIVGARNASSNGARMAE 129 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 TLA++G+TI SGLARGID AH+ A++ GV+IA + GL+ +P HA L + Sbjct: 130 SLAATLASQGLTIISGLARGIDAAAHRGAMRA-GVTIAAVAGGLDRPYPPDHAELQGRI- 187 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 Q G +V+E PL P + +FPRRNR+I+GL+ G +VVEAALRSGSL+TA A GR + Sbjct: 188 AQHGVVVTETPLGTAPQSRHFPRRNRLIAGLALGCVVVEAALRSGSLITADLAAGYGRVL 247 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG--------------------- 286 FA+PG + S G + L+++GAIL +++L L G Sbjct: 248 FAVPGSPLDARSRGSNALLRRGAILTESEQDVLAELPAGWQGRRQPESRQPENGVAQTQA 307 Query: 287 -LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 P P + S A +L + TPVD + R ++T L EL Sbjct: 308 AWPEPPAFPAPTPLSEGPGGQAEIRDAILTLLSFTPTPVDDLVRRCQFSTSAILTVLSEL 367 Query: 346 ELAGWIAAVPGGYVRLRRA 364 ELAG I +PGG V L Sbjct: 368 ELAGNIETLPGGSVVLPSQ 386 >UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_FUSNN Length = 288 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 155/292 (53%), Gaps = 14/292 (4%) Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLF 129 N++ I + + YP L ++ P L+ +G L L ++VVG+R S YG+ Sbjct: 6 NYNFITINDDIYPECLKEISNPPLKLYYKGNLDLLKEERLISVVGTRNPSSYGKLCCEYM 65 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 + + +TI SG A+GID +AHK +L G +IAV+ +GL+ ++P + L + E+ Sbjct: 66 VKKMTGANITIVSGFAKGIDSIAHKTSLLTEGKTIAVIASGLDIVYPASNLSLYREI-EE 124 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G ++SE+ V P NFP+RNRII+GLSKG +VVE+ R GSL+TA ALE R+V+A Sbjct: 125 KGLILSEYEAGVKPFKSNFPQRNRIIAGLSKGTIVVESKDRGGSLITADLALEFNRDVYA 184 Query: 250 LPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 +PG + + S+G + LI+ A ++ E+L++ + + D Sbjct: 185 VPGDVFSEYSKGCNNLIRDSRAKSLSNINELLKDYSWEIEEKN----------DSNKYTK 234 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L ++ E +D + E++ +L+ LE+ G I ++ GG + Sbjct: 235 NQMLILNSLSSE-KNLDNILIETKIEQTEILAELMTLEIMGVIKSIAGGRYK 285 >UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPW6_9FIRM Length = 366 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 145/367 (39%), Gaps = 12/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSF 55 M T WL L + + + L+ A++ L Sbjct: 1 MDKTLAWLWLADAVGSACQYARELLDLWPDPEELYESLRSGMVAPPFCLSDGAARQLLDT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVG 114 E L ++ D FYP +L D P L+V G+ L+ +VG Sbjct: 61 TPFDYEERLDHCLLSGIEILTPDDAFYPARLREIPDLPLVLYVTGDKACLNGHRYAGMVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + A G+ I SGLA G+D H+AA+ +IA LG ++ Sbjct: 121 TRRPSAYGRQAAYDLSLGAAKEGIVIVSGLADGLDSEGHRAAVAAGTPTIAFLGTAIDKT 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPL-AYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L + E GGA+ SE+P F RNR+I+ ++ V V EA LRSG+ Sbjct: 181 YPAANGPLRRQIEEGGGAVCSEYPPHYKGKTTGTFLARNRLIAAQAEVVCVAEARLRSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPD 292 L T A GR V A+PG I + S G + L++ A + E +I+ L Sbjct: 241 LNTVHHAEGYGRPVLAVPGSIYSAMSRGTNELLRTHRAEPLCEAADIVRQLGLAAGAEEK 300 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 P + V+ + A +G +D + G P V+ ELEL G Sbjct: 301 EPAEFSPAS----VSADARAVYAKLGPTAQGIDALCAATGLPANRVLAACTELELFGGAQ 356 Query: 353 AVPGGYV 359 A PG Sbjct: 357 AQPGRRY 363 >UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND2_FERNB Length = 333 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 106/318 (33%), Positives = 162/318 (50%), Gaps = 19/318 (5%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 +T Q + F + L + + LI E YP +L D P +F +G + Sbjct: 33 ITPEQIKEF----NDLVHKLEMRLSKGDISLITYWDEEYPEELRHIPDPPVFIFAKGNVE 88 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L AVVG+R + YG++ +F L+ I SG+A G+D +AH AL+ + Sbjct: 89 FLSYDLFAVVGTRKMTNYGKQVTEMFSTDLSKH-FVIVSGMAYGVDSIAHATALRNLRPT 147 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 IAVLG G++ I+P+ + RL ++ + G ++SE+ P Y F RNRIISG+SKGVL Sbjct: 148 IAVLGCGVDYIYPKSNERLYQEII-KNGCVISEYLPWEKPQKYTFVARNRIISGVSKGVL 206 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V EA SG+L+TA+ +EQG+++FA+PG I S G ++LIK GA LVT P EILE Sbjct: 207 VTEAGTDSGALITAKFGVEQGKDIFAVPGDIFKSTSTGTNYLIKNGAFLVTHPSEILEYY 266 Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLL 343 F H ++ LL + + + ++E+ +P+ E++ L Sbjct: 267 GFKEHRKI------------IELNYDEKLLLEAL-ETNLNPEQLSEKISKPLSEILLLLT 313 Query: 344 ELELAGWIAAVPGGYVRL 361 +EL G + V G Sbjct: 314 IMELKGLVYRVEDGTYAR 331 >UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN52_9FIRM Length = 282 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 110/284 (38%), Positives = 152/284 (53%), Gaps = 13/284 (4%) Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YPP L + P LF G L +A+VG+R S YG ++ LA Sbjct: 2 FTDHEYPPLLREIFNPPYVLFYRGRLPRPKELLIAIVGARRASSYGRNVAQMLGAGLAAA 61 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 G+ + SG ARGID AHK ALQ G + AVLG G++ +P +A++ A + E GG ++SE Sbjct: 62 GIGVVSGAARGIDTAAHKGALQ-KGQTYAVLGCGVDVCYPPENAKILAEIAETGG-IISE 119 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 + PP A +FP RNRII+G+ +GV+VVEA RSG+L+TA ALE+GR+VFA+PG I + Sbjct: 120 YAPGTPPHAGHFPARNRIINGMCRGVVVVEAGERSGALITADYALEEGRDVFAVPGSIFS 179 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN 316 GS+G H L+KQGA LVTE ++ILE APE + + + Sbjct: 180 EGSKGVHRLLKQGAKLVTEVQDILEEYDVRPVSHYAAPE----------LLPDEAAVYGS 229 Query: 317 VGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + E VD + + +V LL+LEL G I Sbjct: 230 LDYEHPLSVDEIVIKTNLSASKVTYALLQLELRGLIGEDGAKRY 273 >UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVV2_9FIRM Length = 360 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 111/363 (30%), Positives = 190/363 (52%), Gaps = 19/363 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---------GLTLRQAQRF 52 +D + L SI L ++++I + +++ L +T + ++F Sbjct: 1 MDRNAIIFLSSI-GLSSSNIIKILDFSIEKNLALNEFLNLEENQYKPLLKKVTFDKIKKF 59 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + +E++L ++ + E YP L D P L++ G+ L + +A+ Sbjct: 60 YCKYEEILENTLNKSQKLQVKISTILDENYPSSLRRIEDPPAILYIRGKDIKLENN-IAI 118 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R H+ YG F + L++ TI SG+A GID ++HK AL+ N +IAVLGNG++ Sbjct: 119 VGARKHTSYGIYAVNKFVDELSSYNFTIVSGMAYGIDALSHKRALEKNMKAIAVLGNGID 178 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P+ + L +LL++ +VSE+P + + FP+RNRIISGLS+GV+VVEA +SG Sbjct: 179 IIYPKANTNLYMNLLDKA-TIVSEYPFGMKATKFTFPQRNRIISGLSEGVIVVEAKEKSG 237 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+TAR A EQG+EVFA+PG I + S+G + LI+ GA + + E+IL P Sbjct: 238 SLITARLAAEQGKEVFAIPGNINSIYSKGTNLLIRDGATPLLQIEDILPFY-------PS 290 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + ++++ +L + D ++ + ++ V + + L +LEL I Sbjct: 291 IIKKEEEKHIIENLSEDENLILNLMEDGNITIEEICNKSNFDVIYINSLLTKLELKSVIE 350 Query: 353 AVP 355 + Sbjct: 351 KIS 353 >UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella RepID=D1W888_9BACT Length = 379 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 100/365 (27%), Positives = 179/365 (49%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR------KSIE 61 + L I+ + MV++ + + + + + + +S + + + Sbjct: 13 IALTRINHFHLTGMVQLYRRLGSATAVIEHRHDIREVLPDASPKLVSSLQNVDQYLRRAD 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + E YP +L D P LF +G ++ ++VVG+R ++ Y Sbjct: 73 EELEWDVSNGVMPLCMNDENYPQRLRECDDAPLMLFYKGSVNLNQRRVISVVGTRRNTVY 132 Query: 122 GERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L V + SGLA G+D +AH+ ALQ ++ VL +GL+ ++P RH Sbjct: 133 GEDLIRRFMAELRQLCPQVLVVSGLAYGVDILAHRHALQNGYPTVGVLAHGLDYLYPPRH 192 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 193 RQTADEMVQKGGLL-TEFLTQTNADKVNFVRRNRIVAGVSDACIVVESAAHGGGLITASL 251 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW-LPDAPENS 297 + REVFA PG +G+P SEG + LI+ A L+ + ++++ + L A Sbjct: 252 SRTYNREVFAFPGNVGSPYSEGCNNLIRDNVAGLINHAYDFVKSMGWEDDARLSRAHHEG 311 Query: 298 FYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ +++ +G + +++++ +AG P+ ++ L LE+ G + A+PG Sbjct: 312 IERQLFPDLSAEELQVVGVLGKNNDLQINMLSVQAGIPIAKLSAILFTLEMKGVLKALPG 371 Query: 357 GYVRL 361 G L Sbjct: 372 GIYHL 376 >UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria RepID=A1VCL3_DESVV Length = 668 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 113/299 (37%), Positives = 153/299 (51%), Gaps = 6/299 (2%) Query: 5 EIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ--AQRFLS-FPRKS 59 E+W L L L +R+ G +RQ AQ S R + Sbjct: 35 ELWAVLALRHTEGLGARSHIRLIRHFGSAYAAVQRAPHLAGSGVRQQAAQALASGRWRAT 94 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ L + ++ + YP +L + D P L+ +G++ L + L VVGSR S Sbjct: 95 AKAEWDALRACDCGILLWNDPRYPERLRSLPDAPALLYCKGDVALLDNPALGVVGSRLCS 154 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G R LA GVTI SG+ARGID AH A LQ G ++ VLG G++ +P + Sbjct: 155 RQGMRMAAQLARDLACAGVTIVSGMARGIDREAHLAGLQGVGCTVGVLGTGIDIRYPYDN 214 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + + G LV+EF P +FP RNR+ISGLS GVLVVEAA RSGSL+TAR Sbjct: 215 EDLFERMASE-GLLVTEFAPGARPEPRHFPIRNRVISGLSLGVLVVEAATRSGSLITARL 273 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREV+A+PGP+ S G H L+++GA V E+IL +L L A + Sbjct: 274 ALEQGREVYAMPGPVSAQTSRGCHDLLEEGAHAVGSAEDILVDLAPQLLGALRARAEAA 332 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 297 SFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + ++ P LLA + D VD + +V LL LE+ G + +P Sbjct: 602 AVNPDMPKEHGDPESRLLALLRDMGEAHVDDLCRALAMAPGDVSGTLLLLEVQGVVRRLP 661 Query: 356 GGYV 359 G Sbjct: 662 GMRY 665 >UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia RepID=C6V4N9_NEORI Length = 375 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + WL+L + + + L Q ++ ++ F + Sbjct: 10 ELLFWLQLSRT--VGEVTFQSLISLYGTAENA----LGQLSTIQQRTKKTRPFSKTDALK 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L E+ + ++ A Y L D P + G + L++ +AVVGSR + Sbjct: 64 ELELTEKFDASILAACENKYSKNLRVIRDPPPVITARGNIELLNTPSIAVVGSRNATINS 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + LA G TI SGLA G+D A K +IAV+G G++ +P + +L Sbjct: 124 CNFAYSLARELAEEGYTIVSGLAIGVDTAALKIT-DSMLPTIAVIGTGIDQCYPTENQKL 182 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++E+GG +V+E P + +F RRNRIISGLS+ V+++EA+ SGSL+TA+ AL Sbjct: 183 QERIIERGGLVVTEVPFGKRGQSVHFARRNRIISGLSECVIIIEASENSGSLLTAQYALA 242 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP- 301 QG+ +FA PG + G + L+KQGAILV +++++L+ Sbjct: 243 QGKYLFASPGAPYDKRFSGSNRLLKQGAILVENALDVIQHLERKKRNDFGYKTLLDVEDK 302 Query: 302 ----------DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 D + L ++L + P+ +A G ++ ++ELE+ G + Sbjct: 303 AFIPFSTLNCDTDKITLIKAQILKKIDSTSIPMSQLAHELGISEKTLLLAIVELEIEGKV 362 Query: 352 AAVPGGYVRL 361 V L Sbjct: 363 TRTIANEVSL 372 >UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKH3_RHOVA Length = 487 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 112/378 (29%), Positives = 167/378 (44%), Gaps = 27/378 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 LRL+ + ++ + + + R + + + E+ + Sbjct: 113 LRLIRTPHIGTVTFWQLIAHFGSAAAAIDALPEFVKHGSRVSPK-SVPSIGTAEAEMERA 171 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 L+ YPP L P L+++G+ +VGSR S G ++ Sbjct: 172 AAAGLTLVAVGEAGYPPLLAEIEAPPPLLYIKGDPRIWQRPAFGIVGSRNASGAGLKFTA 231 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L+ G+ + SGLARGIDG AH+ AL + AVL GL+ I+P H LAA + Sbjct: 232 EISAELSRLGLLVVSGLARGIDGAAHRGALPFG--TCAVLPGGLDRIYPPEHLGLAADI- 288 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 Q G L+ E P A +FPRRNRIISG S GVLVVEAA RSGSL+TAR A EQ REV Sbjct: 289 AQNGLLIGECPPGFVARAQDFPRRNRIISGASLGVLVVEAAERSGSLITARLAGEQSREV 348 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------------------- 287 FA+PG + + G + LIK+GA+L T E+I++ L+ L Sbjct: 349 FAVPGHPLDTRAAGTNRLIKEGAVLTTSAEDIVDALKGKLVHWARFGVEVPQPQRAPKLA 408 Query: 288 ---HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 AP + + ++ + +D + G+ EV ++ Sbjct: 409 AHDDGPVRAPAGAKGGDGLASLDATIASVMQLLSFSPIAIDDICRMTGKQTREVHAAIMS 468 Query: 345 LELAGWIAAVPGGYVRLR 362 L+LAG + ++ LR Sbjct: 469 LDLAGRLERRGSSHIVLR 486 >UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VGE8_9BACT Length = 353 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 12/352 (3%) Query: 21 MVRIAHWVAKQSHIDA------VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHL 74 M + + + +L + L QA + + R+ E L + N Sbjct: 1 MAELYKRAGSATAVIEHKRDIREILPEASTHLIQALKDIDSLREWAEQELEYDRLHNIEP 60 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I + E YP +L D P L+ G + + ++G+R + YG+ R F L Sbjct: 61 ICMNDERYPQRLKECPDAPILLYYLGNADLNNRHVINIIGTRHCTTYGQDIIRSFVRELK 120 Query: 135 T--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 V I SGLA G+D AH+AAL+ ++ VL +GL+ I+PR H A +++QGG Sbjct: 121 VLCPDVLILSGLAYGVDIHAHRAALENGFETVGVLAHGLDDIYPRGHRDTALKMIKQGGL 180 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 L SE+ P+A NF +RNRI++G + ++VE+A + G L+T A GREVFA PG Sbjct: 181 L-SEYTTHTQPVARNFVQRNRIVAGCADATILVESAAKGGGLITCSIARSYGREVFAFPG 239 Query: 253 PIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQF-GLHWLPDAPENSFYSPDQQDVALPF 310 + + SEG + LI+ GA L+T + ++ + + L A + D++ Sbjct: 240 AVHSDYSEGCNNLIRDNGAALITSATDFVKAMGWDDAIKLGQAQQRGIERTLFPDLSSEE 299 Query: 311 PELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + + +++++ +A P+ + L LE+ G I A+ GG L Sbjct: 300 EAIVRVLAKNNDLQINLLSIQANIPISRLTGILFTLEMKGVIRAMAGGCYHL 351 >UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Tax=Corynebacterium RepID=C8NPM8_COREF Length = 403 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 159/386 (41%), Gaps = 23/386 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-DAVVLQQTGLTLRQAQRFLSFPRKSI 60 W L + + + I AV ++ + + + Sbjct: 7 DRLRAWAYLSRVVEGPSVHLQTLLKQGRDPEAIAHAVKHREPWIGDLLRETASRYEWDVA 66 Query: 61 ESSLCWLEQPNHHLIPADSEFYPP-QLLAT------------------TDYPGALFVEG- 100 + L + LI + +P +L P AL+V G Sbjct: 67 QQDLEQILALGGRLITPEDREWPATELDHAFGFAASGMSDHVRTYQDDAVPPHALWVRGG 126 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 +L +L + +A+VG+RA S YG + + L TI SG A G+D VAH AL+ Sbjct: 127 DLRSLTAQAVALVGTRAVSQYGREVTAMIVDNLVPHQWTIISGGALGVDTVAHTTALRAG 186 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++ V GL+ +P + L ++ +GGA+V+E+P PP + F RNR+++ LS+ Sbjct: 187 GTTVVVAACGLDRSYPAHNRGLFEEVVNRGGAIVTEYPPGTPPQRHRFLTRNRLVAALSQ 246 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +V EAA RSG+L T GR A+PGP+ GS G H I+ G A +V +EI Sbjct: 247 GTVVTEAAWRSGALNTLSWCAGLGRVAMAVPGPVTTAGSLGCHERIRNGHAQMVCSGDEI 306 Query: 280 LENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 L A E ++ + Q ++ + +G VA G + V Sbjct: 307 RSLLGAIGGMDAQAQYELNYAANPIQGLSRNELRVYDALGRHPREAAEVATETGLTLALV 366 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRA 364 + L++L G +A + RL Sbjct: 367 IHLLVDLNSRGLVAREGVRWARLAEQ 392 >UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL25_DESVM Length = 553 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 110/294 (37%), Positives = 146/294 (49%), Gaps = 10/294 (3%) Query: 4 TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV------LQQTGLTLRQAQRFLS- 54 TE+W L L + + R+ + G+ A Sbjct: 20 TELWAALALRHSPGIGPRTVCRLLAGLGSALAAVQAADRGGHDWALAGVRPHMAAPVARG 79 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R + + ++ YP +L +D P L+ G+ L + +AVVG Sbjct: 80 VWRDTARQEWDAVRACRCSILLWTDPRYPARLREVSDAPAVLYCRGDASLLANHAVAVVG 139 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G +L+ GVT+ SGLARGID AH AAL+ G +I VLG G++ + Sbjct: 140 SRLSSRAGRGVAADIAYSLSAAGVTVVSGLARGIDREAHVAALEEVGSTIGVLGTGIDVV 199 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P HA L + E G LVSE+ PL +FP RNRIISG S GVLVVEAA RSGSL Sbjct: 200 YPPEHAELFERM-EATGLLVSEYAPGTLPLPAHFPVRNRIISGFSVGVLVVEAAARSGSL 258 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 +TAR ALEQGREV+A+PGP + G LI+QGA VT E++L +L L Sbjct: 259 ITARLALEQGREVYAVPGPATAQYTCGCRGLIEQGARPVTTAEDMLADLAPVLG 312 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Query: 309 PFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 P +L + VD + +V +L+ LE+ G + +PG Sbjct: 499 PDDAILTFLHGRPGAHVDDICRALSMGAADVSCRLVLLEVKGGVRRLPGMRY 550 >UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 Length = 286 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 103/285 (36%), Positives = 152/285 (53%), Gaps = 10/285 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + + WL++ S S+ I V+ + + Q + F S ++ I Sbjct: 4 KERDTWLKIASCKSISAKKRAVIWQKVSTFGCFEMSIEQIVNIF------FSSDKKEQIN 57 Query: 62 SSLCWLEQ---PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 L + + +I + YP L + P LF +G L +A+VG+R Sbjct: 58 MELEEADVYTTEDAEIICILDDNYPDLLKEIYEAPPLLFCKGNTALLKKQAMAMVGTRRM 117 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG + + LA +TI SGLA GID AHKA+L+ G +IAVLG+G++ I+PR Sbjct: 118 SEYGRKACAMIAGELAELKLTIVSGLALGIDAEAHKASLRKRGDTIAVLGSGVSNIYPRS 177 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA ++E G L+SE+ + ++FP RNRIISGL+ G +++EAA RSGSL+TA Sbjct: 178 NEFLANEIIEH-GLLISEYLPNQEARRWHFPERNRIISGLALGTVIIEAAERSGSLITAD 236 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ R+VFA+PG I S G + LI++GA LVT I+E Sbjct: 237 YALEQNRQVFAVPGNIFTDTSRGTNHLIQEGAKLVTNANNIIEEF 281 >UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQR1_9FIRM Length = 302 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 97/285 (34%), Positives = 148/285 (51%), Gaps = 5/285 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I +S YP +LL P L+V G L +A+VG+RA S YG + L+ Sbjct: 19 ISKESPEYPQKLLHYEGMPEILYVRGTLPDPRRPAVAIVGARAASPYGRMQAFRYARRLS 78 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV I SG+A GID AH+ AL+ G + AVLGNG++ +P + L +L + ++ Sbjct: 79 EEGVQILSGMAYGIDTEAHRGALEGEGGTWAVLGNGVDICYPSGNRALYQRILREKCGIL 138 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P Y FP RNRIISGL+ V++VEA +SGSL+TA+ AL+QG+ VFA+PGP+ Sbjct: 139 SEQPTGTRARNYFFPARNRIISGLADLVVIVEAREKSGSLITAQWALDQGKSVFAIPGPV 198 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 S G + LI GA + PE +L L + + ++ +A + Sbjct: 199 TEELSMGCNKLIYDGAGIAYTPEILLRELGIDCEKIVKVK-----TKNELGLATDLKLVY 253 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + V+ + ++ G +V LLEL+++G + Y Sbjct: 254 SCLDLQPKSVEFLIQKTGLSPEKVGGLLLELKISGLAREIGRHYY 298 >UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYG5_9FIRM Length = 286 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 10/293 (3%) Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 N ++ Y L P L+ G+ +S +AVVG+R + YG+ Sbjct: 1 MMANIKIVKNTDSEYSKLLEKIKRPPELLYCLGDTALFNSPCIAVVGTRKPTEYGKWCTY 60 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 ++L RG TI SG+A GID +AH+ AL++ G +IAV+G G++ +P R+ L + Sbjct: 61 NIVKSLVMRGHTIVSGMASGIDEMAHRTALELGGKTIAVMGTGIDGCYPARNKALKRRI- 119 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 EQ G ++SE V P Y+FP RNRII+GLS+ +VV+A + SGSL+TA+ A+E+GR+V Sbjct: 120 EQDGLVISEDGEKVKPRRYSFPIRNRIIAGLSEATVVVQAGVYSGSLITAQLAMEEGRQV 179 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 +A+PG I S G + LI GAI++T P+++ +L ++ D + ++ Sbjct: 180 YAVPGDIDKVMSIGCNKLIADGAIIITVPDDV--------AFLEKTNGDNEVVIDLESLS 231 Query: 308 LPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ V E + +A V +V++ + E+E+ G I G Sbjct: 232 EVERKIYELVKREGEMSFEKIARLTKTGVSKVMSVITEMEIKGLITTSLGRVF 284 >UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYH5_9BACT Length = 370 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 11/361 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRKSIES 62 + L + V + + + + L A+ L E Sbjct: 8 IALTLTPGIGPKGAVHLLDVFGSAEAVFSASADELIEKARLRPELARAILQKKAFADAER 67 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + +I + YP L T DYP L+V G AL L +VG+R + YG Sbjct: 68 EVKHCRKHGIEIIASTDAQYPALLRETADYPHVLYVLGSPEALGKTTLTMVGTRRMTPYG 127 Query: 123 ERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 ++ LA I SGLA GID H+AAL ++ ++ + L I P +H Sbjct: 128 QQMADRLIGELADRVADTVIVSGLAFGIDTACHRAALAFGMPTVGIIASALPGITPAQHT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +A ++E GGA+VSE + RNR+++G+S G +VVE+ + GS+ TAR A Sbjct: 188 AVARDMIEHGGAVVSELHSQTRQNGNFYHSRNRLLAGISGGTVVVESPVEGGSMDTARLA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 R + A+PG + S G + LI+ Q A +V E+I+ + + + D + Sbjct: 248 DGYNRTLMAVPGRATDFASAGANLLIRTQRAQMVCTGEDIVREMMWDQNRPGDLIDRPTA 307 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +P + LL D+ + + E +G E+ LL LE+AG + +PG Sbjct: 308 AP--AALTRDEEGLLGCFRTDDPISAEELCELSGLGFGELSALLLGLEMAGAVRQLPGNR 365 Query: 359 V 359 Sbjct: 366 Y 366 >UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJS1_GLOVI Length = 360 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 106/344 (30%), Positives = 152/344 (44%), Gaps = 14/344 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + W+ + + R+ + + R R+ E Sbjct: 4 ERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRYRER 63 Query: 63 S-----LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + L LE YPP L D P LF G L L S +AVVG+R Sbjct: 64 TDPGLLLEALEDRWPSFWTPADGDYPPLLREIPDPPPLLFYRGPLRQL-SPAVAVVGTRH 122 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG RW ETLA G + SGLA GIDG+AH+AAL V G + AVL L ++P Sbjct: 123 PSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAALGV-GKTAAVLATSLTRVYPP 181 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 HA +AA + G L+SE+ + L +NFPRRNRI+ G+S +V+EA RSG+L++A Sbjct: 182 EHAGMAAEI-AHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A + RE+FALPG I P ++G LI QGA ++ E +L +L L + Sbjct: 241 YLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLV------RAT 294 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 S + + + + D +A G + + Sbjct: 295 VPSALPPVLDGDEKRIWDQIQGDGCSFDELALGTGLTTDRLASA 338 >UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGD0_ANOFW Length = 295 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M D E + L + + R+ + + + QQ L Q+ + Sbjct: 1 MYDTTRERLIHLHHCRGIGWKSIARLLQADPSLASVFHLSSQQLQRLLPIPQKHFTAFFH 60 Query: 59 SI-----ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL-AV 112 + + + E+ N H++ + YP L D P L+ +G + L ++ +V Sbjct: 61 DLHCHKLKRMIKTYEEQNIHIVTIKDDGYPEWLKHIYDPPWVLYAKGNVALLKRKKIISV 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G + L G + SGLA+G+D AH+ L+ +G +IAV+ GL Sbjct: 121 VGTRTPTRQGIAAMHIVLPPLVQNGWIVVSGLAKGVDAEAHRLCLRHHGETIAVIAGGLY 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L L ++SE+P V P ++FP RNRIISGLS G LVV+A RSG Sbjct: 181 YMYPPENESLFRQ-LATTQLIISEYPPFVRPQTWHFPMRNRIISGLSLGTLVVQAKERSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 SL+TA AL+QGREVFA+PG I + G + LI+QGA L+ E+I E + Sbjct: 240 SLITAHFALQQGREVFAIPGDITTKEALGTNRLIQQGAKLILSSEDIEEEFRHLF 294 >UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevotella RepID=C9PX54_9BACT Length = 375 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 95/374 (25%), Positives = 169/374 (45%), Gaps = 14/374 (3%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHI------DAVVLQQTGLTLRQAQRF 52 M + E + L ++ + ++ + + + VL L++A R Sbjct: 1 MNNNETRNAIALTRVNYFNLAGLAQLYRQLGSATAVIEHRNDLREVLPDASPRLQEAMRN 60 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + K ++ + + + + + YP +L D P LF +G + + + + Sbjct: 61 IETHLKVADAEMEYNLRNGIRALSLADDDYPQRLKNCDDAPLVLFYKGTANLNRARVINI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R + YG+ R F L + V I SGLA G+D AH+ AL ++ VL +G Sbjct: 121 VGTRHCTAYGQDLIRRFVSELKSLCPEVLIVSGLAYGVDINAHRQALANRLDTVGVLAHG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ ++P RH + A +L QGG L +EF + NF RRNRI++G+S ++VE+A Sbjct: 181 LDYLYPTRHKQTADEMLTQGGLL-TEFLTNTNADKLNFVRRNRIVAGISDACVLVESAAH 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 G L+T A + R+VFA PGP+G P SEG + LI+ A LV+ + + L + Sbjct: 240 GGGLITTSIARDYNRDVFAFPGPVGAPYSEGCNNLIRDHKAQLVSSAADFVHALGWETDL 299 Query: 290 LPDAPENSFYSPDQ-QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELEL 347 ++ ++ + + ++ ++ A P+ + L +LE+ Sbjct: 300 KRMQATRQGIERQLFPQLSNEEQAVVQALEKQNDQAINQLSLTANIPISRLTVLLFQLEM 359 Query: 348 AGWIAAVPGGYVRL 361 G + + GG L Sbjct: 360 KGILKLLAGGCYHL 373 >UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5 Tax=Anaplasma RepID=D1ASK9_ANACI Length = 378 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 169/363 (46%), Gaps = 14/363 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ-QTGLTLRQAQRFLSFPRKSIESSL 64 +R+M + + ++ + + G R P E + Sbjct: 19 ACIRIMRTAKIGPIAFQKLIKLYKTPELALDALAHGELGNVGRIC------PEDDAEKEV 72 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWYGE 123 + +I YP LL D P + G++ L+ + ++A+VGSR S G+ Sbjct: 73 ELCRKLGARMISMFEREYPQMLLHIYDPPPVITALGDVALLNKNNKIAMVGSRNASANGK 132 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R L+ G SGLARGID H + + ++AV NG++ ++P+ + L Sbjct: 133 RIAYGIAFDLSKAGFVTVSGLARGIDSTVH-SVIFEKMPTVAVTANGIDVVYPKDNLHLY 191 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 +++ GG +V+E P P A FP+RNRIISG++ G +VVEA+ RSGSL+TA AL Q Sbjct: 192 RAIVHNGGVVVTELPFSSLPKASFFPQRNRIISGMAWGTVVVEASRRSGSLITANFALSQ 251 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG-----LHWLPDAPENSF 298 GREVFA+PG +P G ++LIKQGA LV E+I++ L G + L A Sbjct: 252 GREVFAVPGLALDPKYSGSNYLIKQGATLVESAEDIIQALNPGARTIAANSLRHAARRQD 311 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D A +L + T ++ +A ++ +L+ELEL + PG Sbjct: 312 AATDGAGSAAIRRAILQQLSVSPTDIEDLAACTKIGTSTLLAELIELELLRKVHRFPGNR 371 Query: 359 VRL 361 L Sbjct: 372 FAL 374 >UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis RepID=C7CSL8_ENTFA Length = 293 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 141/283 (49%), Gaps = 4/283 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL---SFPRKSI 60 ++ +L + ++++ Q +D + + + R L S+ +I Sbjct: 12 RQLLFKLAVCQGIGNLGILKVLQEAVAQKRVDFSSTEIIRIAEIKKYRELFEQSWLHHTI 71 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 S ++ Q H + YP L + P LF G L L ++ +VG+R + Sbjct: 72 HSEALYIRQCQHQFMTILDAVYPKLLREIYNPPAILFYRGNLQLLSRRKIGIVGARYATS 131 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG R + G TI SGLA+GID +H+ A+Q G +I +LG GL+ +P Sbjct: 132 YGLRVTEALVPKIVKEGFTIVSGLAKGIDSRSHEMAIQNGGQTIGILGTGLDVYYPYEKK 191 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++Q +++E+ P Y+FP RNRII+GLS GV V+EA SGSL+TA+ A Sbjct: 192 EL-QQTMKQNQLVLTEYVNGSGPKKYHFPARNRIIAGLSLGVCVMEARKNSGSLITAQAA 250 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ++ GREVFA+PG I S G H LI+ GA V ++I E L Sbjct: 251 MDYGREVFAVPGSIFQSFSTGCHELIQDGAKCVQTIDDICEEL 293 >UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxydans RepID=Q5FRH1_GLUOX Length = 394 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 112/377 (29%), Positives = 167/377 (44%), Gaps = 28/377 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF--LSFPRKSIESSLC 65 LRL + + + R+ A + G R +R + + L Sbjct: 20 LRLARTTGVGPINFARLMTQYGSA---GAALAALPGRMRRAGRREDPVIPTVSRMSDELE 76 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 LE+ ++ YP L D P LF G++ L + +VG+R S G R Sbjct: 77 RLEKLGGKMLVRGDADYPLLLSCIPDAPPVLFTLGDVRKLSMRSVGIVGARNASAAGIRI 136 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 +A G+ + SGLARGID AH AAL G+++A + GL+ ++P +A L Sbjct: 137 AESLSAEIAHSGLCVVSGLARGIDSAAHAAAL-YPGLTVAAIAGGLDHVYPPANASLQQQ 195 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + E+ G LV+E L P A +FPRRNR+I+G+S G L++EA + SG+L+TA A R Sbjct: 196 IAER-GCLVTEALLGTAPQARHFPRRNRLIAGISLGCLIIEATVGSGTLITADLAQSYNR 254 Query: 246 EVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 E+ +PG +P S G + L+K G A L ++IL+ L L +AP + Sbjct: 255 ELLVVPGSPLDPRSRGGNQLLKTGQATLTENIDDILQVLPSALPPREEAPWQRSSAHSPP 314 Query: 305 --------------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 + L + + + VD V R V V+ L E Sbjct: 315 LTGFSEPSTPWGSPTSEDWVEPDLAQKTVCSLLSVTPVAVDDVVRRCQFSVSAVLATLAE 374 Query: 345 LELAGWIAAVPGGYVRL 361 LEL G + VPGG V L Sbjct: 375 LELGGVVEFVPGGRVAL 391 >UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7E1_9BACI Length = 281 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 12/289 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + +L IS + I H++ K H+ + R + S+ Sbjct: 1 MDE----FKLKFISLHHKSSWSSIYHFLKKDPHMKTSLSAAFSEPDR---KLFFPTNSSL 53 Query: 61 ESSLCWL---EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSR 116 E ++ + E+ H I YPP L P L+ +G++ LH +LAVVGSR Sbjct: 54 EKTIEKIRQYEKYGIHCITIFEPEYPPLLKEIYQPPWVLYAKGDISFLHLDPKLAVVGSR 113 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + L +GVTI SGLA G+D AH+ A+ + G +I V+ GLN I+P Sbjct: 114 QITGYGRSAIKKVFPGLVGKGVTIVSGLAAGVDAEAHETAISLGGRTIGVIAGGLNHIYP 173 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + RLA ++E ++SE+P D P + FP RNRIISGLS+G ++EA +SGSL+T Sbjct: 174 KSNERLARRMMEDH-LVISEYPPDARPDRWQFPMRNRIISGLSQGTFIIEAKSKSGSLIT 232 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 A A+ +GR+VFALPG I +P S G + I+QGA L+ + EILE L F Sbjct: 233 ANYAVNEGRDVFALPGSIFSPASAGTNEWIQQGAKLIADASEILEELNF 281 >UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=Betaproteobacteria RepID=C5AF38_BURGB Length = 445 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 134/402 (33%), Positives = 183/402 (45%), Gaps = 45/402 (11%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-DAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WL L S S L + + DA L A R + PR + Sbjct: 11 LAAWLHLASASGLPAPARETLLQAFDSIEALVDADHAALASLAGEAAARAVHAPRAAALD 70 Query: 63 -----SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 WL P H L+ YPP+ D P L+V+G+ L +A+VGSR Sbjct: 71 AEADAVRAWLAIPGHRLVTRHDADYPPRFAMLYDPPPLLYVKGDAARLKRRAVAIVGSRL 130 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G F LA G+ + SGLARGID AH+ AL ++AV+G G++ ++P Sbjct: 131 ATPQGRADAAWFARALAAAGLVVVSGLARGIDAAAHRGALDSAAGTVAVVGTGVDRVYPA 190 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H LA ++ Q GA++SE+PL P A NFP+RNR+I+ L GVLVVEAA RSGSL+TA Sbjct: 191 AHHLLAEAI-AQHGAVLSEWPLGTPARAANFPQRNRLIAALCDGVLVVEAAPRSGSLITA 249 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R A + GR+VFALPG I P + G H LI+ GA LV P +ILE + L + Sbjct: 250 RVANDIGRDVFALPGSIHAPLARGCHALIRDGAKLVETPSDILEEFGITVQELARPAAAA 309 Query: 298 FYSPDQ--------------------------------------QDVALPFPELLANVGD 319 S + + + LL +G Sbjct: 310 ADSGTRFRAAGKRPRREKTGSNNNEAAQSPGRDGTGAAPDCAGVESLPPEALALLDALGH 369 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 P D++A RAG + LL LELAG +A++PG + Sbjct: 370 GPVPADLLASRAGLAADTLPHLLLRLELAGRVASLPGDRYQR 411 >UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=Q47S58_THEFY Length = 394 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 166/372 (44%), Gaps = 18/372 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTL-----RQAQRFLSFPRK-S 59 +++ + + + +AV L G + R+ +R+ + R Sbjct: 22 WSAVAEPGDPVLDALLRTYSAAQAWEAVCAGTPLPLPGTAVSTTAYRRWERWQACARDTD 81 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAVVGSR 116 ++ L + L+ +P QL + P AL+V G +L +++VGSR Sbjct: 82 VDGMLTRAGELGIRLVVPGDPEWPSQLDLLAERRPYALWVRGTHDLRNACLRSVSIVGSR 141 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 A S YG TLA G + SG A GIDG AH+ AL + ++AVL G++ +P Sbjct: 142 AASAYGLHVAVEMAATLAHHGWCVVSGGAYGIDGAAHRGALSGDAATVAVLACGVDLAYP 201 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + H +L A ++ G +VSE+P P + F RNR+I+ L+ G +VVEA RSG++ T Sbjct: 202 KGHEQLFAEVV-NHGVVVSEYPPGTAPTRHAFLVRNRLIAALTPGTVVVEAGQRSGAMNT 260 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A A E GR + A+PGP+ + S G H L++ A+ VT +++E L D+ Sbjct: 261 AAHAQELGRTLMAVPGPVTSALSAGCHRLLRDYQAVCVTGARDVMEQLSPLGAAEGDSSG 320 Query: 296 NSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 S D + +L + V +A +G + QL L AG + Sbjct: 321 GVQVSADL--LDDTAQRVLGALPERGSAGVARIAAASGLGPDAALRQLGLLAAAGHVERT 378 Query: 355 PGGYVRLRRACH 366 P G+ R Sbjct: 379 PTGWRRRIPGAR 390 >UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M986_9BACT Length = 366 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 26/366 (7%) Query: 2 VDTEIWL---RLMS--ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 +T +WL L + + D + + W++ + + T +QA R Sbjct: 12 KETLVWLGSGTLSARALEGCPDVDGLELLDWLSARRAV----------TPQQASRLRDLW 61 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R+ L + ++ YP +L + P L+ G + +AVVG+ Sbjct: 62 RQGWPARQLEDCTESGVTVVTCRDSQYPERLWDCAEPPMVLYCRG---PVVQSGVAVVGT 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + L+ GVT+ SG A G+DG +H AL + AVLG G++ + Sbjct: 119 RRCSAYGAHVAQWVGRGLSEAGVTVVSGGAAGVDGASHSGALDGGTPTAAVLGTGVDVVW 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L + ++ GG+L+SE+PL ++FPRRNRI++ L+ V+VVE+ +R G+++ Sbjct: 179 PRGHEELFSRIIGSGGSLISEYPLGAAGKPWHFPRRNRIVAALATSVVVVESPIRGGAMI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+E GR+++A+PG I G + L+ GA + + + L+++ Sbjct: 239 TARLAMEMGRDLWAVPGRIDEDTCAGSNRLLYDGATPLVDRQSFLQSVTGLGQL------ 292 Query: 296 NSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 N F + + ++ +L V D ++ +G P +V L L++ G I Sbjct: 293 NLFDADGESGLSDVQRSVLEAVRSSGDKSADQISIDSGVPPYQVPGVLSALQVKGLIYPS 352 Query: 355 PGGYVR 360 G R Sbjct: 353 GVGRWR 358 >UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=7 Tax=Betaproteobacteria RepID=C1D688_LARHH Length = 383 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 131/353 (37%), Positives = 179/353 (50%), Gaps = 11/353 (3%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-RKSIESSLCWLEQ 69 I L + R+ + + R A+ + R+ E+ WL + Sbjct: 36 IPGLGAVRLNRLLQAFGSAEAVLEAGTAGLTGIVPARLAEAIVQTDTRREQEAVAAWLAR 95 Query: 70 -PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 L+ YPP L TD P L++ G L LAVVGSR + G R Sbjct: 96 GEGRDLLTLADADYPPALAELTDPPPLLYLHGRRELLQQPMLAVVGSRQATPQGRRDATR 155 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 F LA G+T+ SGLA GID AH+ AL G ++ V+G G++ I+P + LA + Sbjct: 156 FARALAGSGLTVVSGLAAGIDAAAHEGALAAGGGTVGVIGTGIDRIYPAANRDLAYRMAA 215 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 + G LVSE PL PPLA +FPRRNR+I+GLS G LVVEA L SGSL+TAR ALE GREVF Sbjct: 216 E-GLLVSELPLGSPPLAAHFPRRNRVIAGLSLGCLVVEADLESGSLITARLALEAGREVF 274 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG I +P ++G H LI++GA L E+IL L L + + Sbjct: 275 AMPGSIHSPVAKGCHALIREGAKLTECLEDILSELPPVLSPPVEETRSQAVP------QA 328 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +LA +G E+ +D + ER G V ++ LL ELAG + +PGG + Sbjct: 329 IEDAVLAALGAEILTLDSLVERTGLTVDTLLGMLLAHELAGQVVGLPGGRYQR 381 >UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBT0_9LACT Length = 289 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 99/279 (35%), Positives = 147/279 (52%), Gaps = 3/279 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS--L 64 L + +R+ + H+ A L R +++ + L Sbjct: 10 LFHLTLCKGIGATSRIRMLSSLMDSPHLSAYELAFCAQLNAANTRLFMDSYAAVDRAVAL 69 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 ++ + + + YP L + P LF +G+L L+ LA+VGSR S YGE+ Sbjct: 70 NEYKKRHIKWVSILDQSYPEYLKHIYNPPALLFYQGDLTLLNQKLLAIVGSRLTSSYGEK 129 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L T G+T SGLA+GID + H+ +++ G +IA++G GL+ +P + +L Sbjct: 130 ALTILLPELITNGITTVSGLAKGIDRLVHEKTIELGGRTIAIIGTGLDQFYPFENEKLQK 189 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + L+SE+PL PL +FP RNRII+GLS G LV+EA RSGSL+TA AL++G Sbjct: 190 EI-AKNHLLISEYPLGTKPLKQHFPMRNRIIAGLSLGTLVIEAKYRSGSLITANIALQEG 248 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 REVFA+PG I NP SEG + LI GA V + ILE Sbjct: 249 REVFAVPGNITNPYSEGTNDLILHGAKCVLTADHILEEF 287 >UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42420 Length = 290 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 100/285 (35%), Positives = 148/285 (51%), Gaps = 7/285 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHW----VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK- 58 E + L S L + + + + + A ++ L +A + +++ ++ Sbjct: 5 RERLIVLHSSMFLSWKQIAALINHDPELLTPFTSSSAFFIKHLHLKRDKAVKLVTYLKEV 64 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRA 117 + + L + YP QL D P L+ +G++ L +LAVVGSR Sbjct: 65 NSREYVSKLATSQITTLTRFDADYPEQLKELYDPPWVLYCKGDIDLLLIKIKLAVVGSRT 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + L V I SGLA GID AH+ + NG +IAVLG+G + +P+ Sbjct: 125 PTNRGLGAVANLVKPLVKENVCIVSGLALGIDTAAHQQTISQNGHTIAVLGSGFHHFYPK 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + ++SE+P PP + FP RNRIISGLSKGVLV+EA RSGSL+TA Sbjct: 185 ENKNLFTYMAAHQ-LVISEYPPHQPPAKWTFPARNRIISGLSKGVLVIEAKERSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 AL+Q R+VFA+PGPI + S+G + LIK+GA LV E +IL Sbjct: 244 DQALDQNRDVFAVPGPIDSELSKGTNQLIKEGAKLVVEMSDILNE 288 >UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKZ0_9BURK Length = 362 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 121/320 (37%), Positives = 163/320 (50%), Gaps = 19/320 (5%) Query: 66 WLEQPNHHL-IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 WL Q N + YP LLA D P LF EG L + +A+VGSR + G Sbjct: 50 WLLQSNKRFWVSILGPGYPQSLLALKDPPLILFGEGRQDLLKTRGIAIVGSRNATRTGLS 109 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + F + A + SGLA GIDG AH ALQ G +IAVLG G + I+P HA L A Sbjct: 110 NAQGFGKAFAQAQWVVVSGLAEGIDGAAHAGALQALGATIAVLGCGPDEIYPPHHAGLKA 169 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ QGG ++SE+P P A FPRRNRII+GL+ +LVVEAA+RSGSL+TAR A E G Sbjct: 170 QIVGQGGLVLSEYPPGTAPQAGFFPRRNRIIAGLADALLVVEAAMRSGSLITARVASELG 229 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP---------- 294 R V A+PG I + S+G H +IK+GA+LV +E++E + L A Sbjct: 230 RPVGAIPGSIHSSQSKGCHDMIKKGALLVETAQELMEEAKASLPAYKLASVLQEDDSDCH 289 Query: 295 -ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E + + +L +G + D +A + G + + L ELEL G + + Sbjct: 290 TEMTCTIDTDAEPDEELGRVLQYLGHDPVHTDTLARQLGLGTEDTLAALTELELLGLVLS 349 Query: 354 VPGGYVRLRRACHVRRTNVF 373 G VR VF Sbjct: 350 ESGNRW-------VRSNGVF 362 >UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobacterales RepID=A1BA43_PARDP Length = 418 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 116/395 (29%), Positives = 171/395 (43%), Gaps = 45/395 (11%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 LRL+ + R+ A + + + PR + E+ + Sbjct: 27 LRLIRSRRVGPATFHRLLDEHGSAEAALAALPAIARAAG--VEDYAPCPRAAAEAEIAAG 84 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 + L+ YP L D P L++ G++ L +AV+G+R S G R R Sbjct: 85 HRAGARLLTWGDPDYPALLREVADAPAVLWLRGDISVLARMPVAVIGARNASSLGLRMAR 144 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L+ G + +GLARGID +AH+AAL +IAV+ G++ I+P +A LA + Sbjct: 145 GMASGLSQSGAAVVAGLARGIDTIAHEAALHGG--TIAVMAGGIDKIYPGENAALAEEIC 202 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 E G LV+E P P+A +FP RNRIISGLS+ V+VVEAA RSGSL+TARC L+QGREV Sbjct: 203 ET-GLLVTEQPPGTEPVARHFPARNRIISGLSRAVVVVEAAYRSGSLITARCGLDQGREV 261 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA-------------- 293 A+PG + + G + LI+ GA LV ++L LQ Sbjct: 262 MAVPGHPMDARAGGCNALIRDGATLVRNSADVLAALQSNDPIAAKQAPAENPVEATPAAV 321 Query: 294 --------------------------PENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 D +LA +G T +++ Sbjct: 322 AAMPVQVRQPAAVARRLAELGHGIHHRPMMGRPRDAGGPVNLEGRILARLGPSPTEENML 381 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 G P + +L LEL+G + + GG + L Sbjct: 382 IRDLGVPAAVLAPAILALELSGRVQRIAGGKLALN 416 >UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME16_9PORP Length = 384 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 109/372 (29%), Positives = 167/372 (44%), Gaps = 17/372 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI-----ES 62 L + + + + + + A L R ++ Sbjct: 12 YALTQLKGVSLQLARHLIEFAGSATALWADPQALARLNSHVYTHLYPLLRDRAKLEETQA 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWY 121 L ++ YPP LL D P LF G+L LH L+VVG+R S + Sbjct: 72 LLQRTADLGILMVSIYDADYPPLLLQCADAPLILFYLGDLAPLHAEQTLSVVGTRKPSQH 131 Query: 122 GERWGRLFCETL--ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + L T VTI SGLA G+D V+HKAALQ ++AVL +GL+ I+P H Sbjct: 132 GVEDLQTIISHLPSVTDSVTIVSGLALGLDAVSHKAALQAGLPTVAVLAHGLHMIYPSNH 191 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA S++ GGAL+SE+P V P + F RNRI++GL++ LV ++A R GSL+TA Sbjct: 192 RNLARSIVSHGGALLSEYPAGVKPQRHQFVLRNRIVAGLTQATLVGQSAERGGSLITAHQ 251 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPE--- 295 A + R V+ALPG + +EG + LI A L+T + E+L++ Sbjct: 252 AFDYDRAVYALPGRPSDRENEGCNNLIYNNIAKLITSATHLCEDLEWKKPDHEARSAVGS 311 Query: 296 ---NSFYSPDQQDVALPFPELLANV--GDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 S + + + LL + + +D + ++ V EV +L LE G Sbjct: 312 MSHESKLNALRARLEPKTRPLLDLLIESGDGLSIDAICDQTLMGVDEVSFRLFLLESDGA 371 Query: 351 IAAVPGGYVRLR 362 ++ P G +L+ Sbjct: 372 VSLQPDGRYKLQ 383 >UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales RepID=B2IEN8_BEII9 Length = 429 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 119/417 (28%), Positives = 170/417 (40%), Gaps = 63/417 (15%) Query: 2 VDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 + E WLRL + + + S A L R+ + Sbjct: 15 DERERFDWLRLSRSEMIGPRTFLSLLDRYRSASSALAA---VPDLARRKGRPIKLADTSD 71 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +E L I YPP L P + V G +L ++A+VG+R S Sbjct: 72 VERECEALAAAGGSFIALCEPDYPPLLRLIDAPPPIIAVRGRRESLARAKVAIVGARNAS 131 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + +A G I SGLARGID AH+AAL+ +IAVL GL I+P H Sbjct: 132 AAGLVFTERLSREIAKAGYVIVSGLARGIDAKAHQAALETG--TIAVLAGGLGRIYPAEH 189 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A L LL GA +SE P +FPRRNRI+SGLS G++VVEAA +SGSL+TAR Sbjct: 190 APLLERLL-GEGAAISEMPFHWEARGRDFPRRNRIVSGLSLGLVVVEAARQSGSLITARF 248 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP----- 294 A +QGR++FA+PG +P +EGP+ L+++GA T+P+++++ L + + Sbjct: 249 AADQGRQIFAVPGSPLDPRAEGPNDLLQEGATFCTKPDDVIDALANQRNHVARPGFAEAS 308 Query: 295 -------------------------------ENSFYSPDQQDVALPFPELL--------- 314 + + +L Sbjct: 309 APSDGADLLWDEIDFLETDASVFRKSIKAEWDEETVPTPAAALFSDESAVLIASDGQDHP 368 Query: 315 ----------ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 A +G VD +A A P E+ LL LEL G + V L Sbjct: 369 DQASLKERIIALLGPAPVSVDELARAAASPPGELQAVLLILELEGRLTRHGASLVSL 425 >UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7A4_9ACTO Length = 437 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 160/353 (45%), Gaps = 39/353 (11%) Query: 47 RQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH 106 R A R I L LE+ L+ ++P L P L+V G+ L Sbjct: 86 RWAPRLSGL---DIRRELEVLERLGGSLVLPGDAWWPQGLDELDQPPACLWVRGDPALLA 142 Query: 107 SFQ-----------------------------LAVVGSRAHSWYGERWGRLFCETLATRG 137 LA+VGSRA + YGE+ LA G Sbjct: 143 CRSDGADSTMRPSDPGRFRQDLVAQGPATGLSLALVGSRASTRYGEQVASQMAAQLADHG 202 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 + SG A GID AH+ AL+ G +I+V G++ ++P +A L ++E GALV+E Sbjct: 203 AVVVSGGAYGIDAAAHRGALRT-GRTISVSAGGVDRLYPAGNATLLQEVIEH-GALVAEV 260 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 P P + F RNR+I+ +S+ +V+EAA RSG+L TAR A + GR + A+PGP+ + Sbjct: 261 PPGCQPGRHRFLSRNRLIAAMSQATVVIEAAWRSGALSTARHAADLGRPLGAVPGPVTSM 320 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPEL 313 S G H L+++GA+ VT+ +E LE + P+A + + + + + Sbjct: 321 ESAGCHRLLREGAVCVTDADEALELVLPLGLTDPEADKEADPARAGSGLLDGLDRSSAAV 380 Query: 314 LANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 L + V+ +A AG EV L LELAG + P G+ R + Sbjct: 381 LDAMPARGAASVEALARSAGLAESEVRAALGLLELAGKVCRDPRGWWRRASSG 433 >UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFD3_KOSOT Length = 343 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 127/360 (35%), Positives = 183/360 (50%), Gaps = 22/360 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E + L L DD+ + + ++ L R+ ++ +S R S+ Sbjct: 1 MNRLEYAI-LALAGDLTVDDLSILQSHNIGLKELTTSRIEL--LNERKQKQIISKCR-SV 56 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHS 119 E L + I + YP +L A+ P LF EG L+ LA+VGSR + Sbjct: 57 EKKLKEFR----NFITFQDQQYPEKLKASLFPPPVLFYEGNPDILNEENSLAIVGSRKAT 112 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + F L G+ I SGLA GIDG AH+ +LQ G ++AVLG+G++ ++P+ + Sbjct: 113 QYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVLGSGIDIVYPKSN 172 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +L + + E G +VSEF PP+ YNFPRRNRII GLSK VLVVEA RSGSL+TAR Sbjct: 173 RKLFSFITEH-GCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARL 231 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 AL+ GR+VFA+PG I SEG +WLI+ GA L+ E+ILE P S Sbjct: 232 ALDNGRDVFAIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEF----------PTVSRS 281 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 S + ++L+ G+ + E E++ +L L+L G + G + Sbjct: 282 SSKDIQIKSSVLKVLSEFGE--LEFSELLEHTKLEHTELLLELTRLQLEGLVTESTGKWR 339 >UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisella tularensis RepID=A4KPU6_FRATU Length = 245 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 1/244 (0%) Query: 95 ALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 L+ G L+S QLA+VG+R HS YG+ C L +TI SGLA GID +AHK Sbjct: 2 ILYCSGNSDLLNSQQLAIVGARNHSSYGKNVTAKLCADLKDSKLTIISGLAYGIDTLAHK 61 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRI 214 A+ N +IAV+G G++ ++P + L ++ G ++SEFPL PL YNFP+RNRI Sbjct: 62 YAIDNNLSTIAVVGTGVDVVYPSSNRELYNKIINTNGLIISEFPLGTGPLLYNFPQRNRI 121 Query: 215 ISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVT 274 ISGLSKGV+VVEAA +SGSL+TA LEQ +EVFA+PG I + S+G + LIKQGA LV Sbjct: 122 ISGLSKGVVVVEAASKSGSLITAELVLEQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVC 181 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 +ILE + + + ++ + + +L ++ E+T +D + ++ P Sbjct: 182 NVNDILEEIDIASNTSQTSSTDNQVNK-IISLNESERIILGSIDRELTTIDKIIIKSKLP 240 Query: 335 VPEV 338 +V Sbjct: 241 YNQV 244 >UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Streptosporangineae RepID=D2AUI4_STRRD Length = 396 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 116/349 (33%), Positives = 167/349 (47%), Gaps = 13/349 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK----SIESSLCWLEQPNHHLIPADS 79 +A W A ++ + LT R + F S+ + L E+ L+ Sbjct: 46 LARWFADSPRRESAGSRDERLTARLGRMFASWAARLETADPVRDLDEGERRGARLVVPGD 105 Query: 80 EFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 +P QL + P AL++ G +L +AVVGSRA + YG F L R Sbjct: 106 SEWPTQLDDLGESRPHALWLHGEADLRFSCLRSVAVVGSRAATPYGTHVAAEFGAGLGER 165 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 G + SG A GIDG H+ AL ++AVL G + +P H L A++ Q G LVSE Sbjct: 166 GWVVISGGAYGIDGAVHRGALAGETPTVAVLACGADVAYPSAHHSLFAAVRSQ-GVLVSE 224 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 P+ P F RNR+I+ LS+G +V+EAA+RSG+L TA A+ R + A+PGP+ + Sbjct: 225 CPMGATPTRPRFLIRNRLIAALSRGTVVIEAAVRSGALNTAGHAVSLNRHLAAVPGPVTS 284 Query: 257 PGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 S G H LI+QG AI VT PEE++E + L P D ++ +L Sbjct: 285 ETSAGCHRLIRQGRAICVTTPEEMIELVGAMGGDLAPEPRGPVLPRD--RLSPEIRRVLE 342 Query: 316 NVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 V T +A AG + V++ L L AG++ P G+ RLR Sbjct: 343 AVPARTGTGPATIAVAAGVDLDTVLSCLGALAAAGYVERAPRGW-RLRP 390 >UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKL7_9BACT Length = 358 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 105/367 (28%), Positives = 171/367 (46%), Gaps = 16/367 (4%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR--QAQRFLS-FP 56 M +E L L + G + + + L + + +R + Sbjct: 1 MTRSERALLALNFSVNAPGQWARELDLLGETAESLVSNRKLALSLGFKEDRWERMAGLYG 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E + + + +P L + D P L+V+G +++VG+R Sbjct: 61 SDWPEEEMERASRFGAQVFFRGDPLFPDGLDHSDDPPVVLYVKGSWPI-PGPCVSIVGTR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R E LA GV + SG A GIDG AH AL+ G ++AVLG G++ ++P Sbjct: 120 RCSPYGSQVARALAERLALAGVLVVSGGAMGIDGSAHSGALEGQGATVAVLGTGVDVVYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +L +S+ E+ GAL+S FP+ + ++FP+RN II+ L+ ++VVE+ ++ GS++T Sbjct: 180 RGHEQLFSSISEKRGALMSRFPMGIRGNRWHFPKRNGIIAALADHLVVVESPIKGGSMIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A A E GR V+A+PGPI S+G + L+ GA + + +E + + A + Sbjct: 240 AGLAGEMGRPVWAVPGPIVQKVSQGSNKLLFDGAQPLWDLDEFVSFV---------AGRD 290 Query: 297 SFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV- 354 S S LL + D +A++ G VPEV+ L +LE I Sbjct: 291 SQLSLFPPGEPPKPSPLLEEIATSGGITADGLADKLGISVPEVLATLADLEADEKIYRSG 350 Query: 355 PGGYVRL 361 PG + L Sbjct: 351 PGRWCAL 357 >UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E7_LISMF Length = 286 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 95/285 (33%), Positives = 144/285 (50%), Gaps = 10/285 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 WL++ S S+ I + + + AQ + Sbjct: 4 KQRHTWLKIASCKSISAKKRASIWQKLTEFDQYEMTTQTFAESFFPVDKLAQILMEL--- 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + LI + YP L + P LF +G + L +A+VG+R Sbjct: 61 ---ETAEACFFDDVTLIWILDDAYPALLREIYEAPPILFCKGNIDLLQQQAIAIVGTRQM 117 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG + LA +TI SG+A GID AH+A L G +IAVLG+G+N ++P++ Sbjct: 118 SEYGRKACMKIASELAENKLTIVSGMAIGIDSTAHRATLNKQGATIAVLGSGVNKVYPKK 177 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA ++++ G L+SE+ D ++FP RNRIISGL+ G +++EAA RSGSL+TA Sbjct: 178 NELLAKEIVKE-GLLLSEYLPDEEAKRWHFPERNRIISGLAIGTVIIEAAERSGSLITAD 236 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ R+VFA+PG I +G ++LI++GA LV I+E Sbjct: 237 IALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNSNNIIEEF 281 >UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z300_9GAMM Length = 380 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 170/366 (46%), Gaps = 10/366 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIESS 63 +W ++ L ++ + G LR + R + + Sbjct: 14 LWFEFLATKMLDRASKRKLLAQGFTPPQLLEPHGTWPFDGAELRASLRVSKSRQVARLKP 73 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L + + + YPP L +D P ALFV G+++ L +A+VG+R S G Sbjct: 74 LLACHLLHWGRQSSGCDVYPPLLSGLSDAPLALFVSGDINCLSRPAIAIVGTRRPSRDGL 133 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + LA G + SGLARGID AH+ AL+ G ++AV+ G++ I+P H RLA Sbjct: 134 KLADQMGYQLAAAGFLVVSGLARGIDAAAHRGALRSGGQTLAVMATGMDRIYPSEHYRLA 193 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + Q GAL+SEF V P +FPRRNR +SGL +V+EA SGSL+TA A+EQ Sbjct: 194 EEVAAQ-GALLSEFCPGVVPHRGHFPRRNRTLSGLCLATVVIEAGHPSGSLITANAAVEQ 252 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------HWLPDAPEN 296 GREVFA P + + G G L+ QGA L+ P ++E+L L D N Sbjct: 253 GREVFAAPWSLFHRGGAGCLRLLSQGAQLIDTPAAVIEHLAVHLSGWAELTADALDYSSN 312 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + + +LL +GD + +A +++ + +LEL G++ Sbjct: 313 AGETVSLAPLEPAKRQLLTLLGDGEHDLASLASALQCSSRQLLAMVTQLELQGYVEQTSA 372 Query: 357 GYVRLR 362 G +R Sbjct: 373 GLRAVR 378 >UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP6_BACSK Length = 303 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 96/281 (34%), Positives = 152/281 (54%), Gaps = 6/281 (2%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQR-FLSFPRKSIESSLCWLEQPNHH 73 ++ W + G+ + A + + + E+ L + Sbjct: 22 RAFSKLLCWDPSLQAPYHASPLEIAAKLGINEKSATAFWRHLHKTTPENMYANLVETGIQ 81 Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 ++P YPP L D P L+ +G + L + ++A+ G+R + YG + + Sbjct: 82 VLPLFHPLYPPLLKTIYDPPYLLYAKGNIKRLQTKKIAICGTRTPTAYGRAALATIAKPI 141 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 + +TI SG+ARGIDG+AH+ A++ G +IAVLG+G + I+P H+ L +L E L Sbjct: 142 SEHSLTIVSGMARGIDGLAHEQAIRTGGATIAVLGSGFDNIYPPEHSTLFHALAEHQ-LL 200 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V P ++FP RNRIISGLS+ V+++EA +SGSL+TA ALEQGR+VFA+PGP Sbjct: 201 LSEYPPFVKPQRWHFPVRNRIISGLSQAVIIIEAKRKSGSLITADLALEQGRDVFAVPGP 260 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 + + SEG +WLI QGA + E + E + L ++ Sbjct: 261 VTSAQSEGTNWLISQGAGCLYTSEALFEAMPQLLSKTGESQ 301 >UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobacillus RepID=A8YV46_LACH4 Length = 282 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 90/275 (32%), Positives = 143/275 (52%), Gaps = 1/275 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E LRL + ++ IA+ + I+ L++ L+ + Sbjct: 1 MKKKEFLLRLKLQKGVGYVKLLTIANQMKPGLEIELDDLKEMDLSEKLVDACHLAFNDDK 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + L + +I E YP +L P LF +G L L + +VGSR + Sbjct: 61 LAKLTRQIRRQCIVISFFDEEYPEKLRQIYRPPLILFAQGNLSLLKKDIVTIVGSRYPTH 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Y L + I SGLARG+D +AH+A L+ NG ++AV+GNGLN +P+ + Sbjct: 121 YSRDVINRLVPNLLDQNKVIASGLARGVDALAHEATLKNNGRTVAVVGNGLNHSYPQENY 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + + G ++SE+ D PP Y FP+RNRI++GLS+ ++V EA +SGSL+TA Sbjct: 181 SLQEQI-KNDGLIISEYLPDTPPRPYRFPKRNRILAGLSESIIVTEAKEKSGSLITASLG 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 L++ R+++A+PGPI + S GP+ LI+ GA + + Sbjct: 240 LQENRDIYAVPGPITSKLSAGPNQLIEAGATPIVD 274 >UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus RepID=B2GC52_LACF3 Length = 291 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 101/295 (34%), Positives = 143/295 (48%), Gaps = 8/295 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL--QQTGLTLRQAQRFLSFPRK 58 M E RL L VR+ + D + L Q+ +T R + L + Sbjct: 1 MQPREFIFRLSLCPGLGPLSRVRLWRVAEQNYCFDNLELLTSQSQITPRVKESLL---KN 57 Query: 59 SIESSLCWLEQPNHHL--IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 L L + N+ + I YP L P L+ +G LAVVGSR Sbjct: 58 WASPYLDRLVEQNYRVPQITLLDPDYPAILREIYCPPLVLYYQGNRDLFKMPALAVVGSR 117 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG ++ +TI SGLARGID +H+ AL G I V+G GL+ +P Sbjct: 118 QATSYGFTVLEKLIPSVVNHRITIVSGLARGIDSRSHEQALASGGAVIGVIGTGLDQTYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L A + +Q G L++E+PL PPL +FP RNRII+GL + LVVEA +SGSL+T Sbjct: 178 RSNGALQAQVADQ-GLLLTEYPLQTPPLPSHFPARNRIIAGLCQTCLVVEAKQQSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 A AL++ R V A+PGPI +P S G + LI +GA + +++L Sbjct: 237 ANLALQENRNVCAVPGPITSPTSLGTNELISEGAQPILNSKDLLAEFDPWFEAEA 291 >UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia RepID=C7NA26_LEPBD Length = 363 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 31/373 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL + + ++ + + + + + + L Sbjct: 3 WLRLKE-YGMKNAHIKKLMLIFQDFEELFYEENFKL-FNDELKSQLEEAMKIDMTARLEL 60 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE--------------LHALHSFQLAV 112 E+ +I A+ + YP +L D+P L+++G+ + + + + Sbjct: 61 YERNRVRIISANDKEYPKKLKEIKDFPVFLYLKGKKLKDYDKIKIDKGKISVDNKRNIGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + +G+ L VT+ SGLA GID +A K AL ++V+G GL+ Sbjct: 121 VGTRRATKFGKTACEKIVNELVNYEVTVISGLADGIDTIALKTALDKEIEVVSVVGTGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L + E G L+SE+PL P + FPRRNRII+G+S GVLV E+ + G Sbjct: 181 IVYPYENRDLWERIGE-VGTLISEYPLGTQPTRWTFPRRNRIIAGISDGVLVAESFKKGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA A REVFA+PG I P EG + LIK A LVT +I E + + Sbjct: 240 ALITAELAFSMNREVFAVPGFINYPSFEGCNDLIKNNKAKLVTCGNDIAEEFLWDIKKEK 299 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVP--EVVTQLLELELAG 349 Q + + + +E + + + + + ++ + ++ L++ G Sbjct: 300 SK---------LQKLTSEEQIVFETIMEE-VSFEQILQNVKEKIEKNKLFSIIMSLKIRG 349 Query: 350 WIAAVPG-GYVRL 361 I G Y+R+ Sbjct: 350 LITETNGAKYIRI 362 >UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_DESMR Length = 455 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 120/323 (37%), Positives = 156/323 (48%), Gaps = 5/323 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLS--FPRK 58 + LRL + + RI A GL A L+ + Sbjct: 23 ECLACLRLRLQPGIGPRTVRRIFDRYDSAVAALADARSFGPQGLCPDDAAAALARGLTSR 82 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E+ L +P YP +L D P L+V G++ L +A+VG+R Sbjct: 83 AAETELAAAAAKGLTPLPYFHPAYPARLRELPDPPAMLYVVGDVTLLSGPCVAMVGARQC 142 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG LA GVT+ SGLA GID AH L G S+A+LG GL+ ++P Sbjct: 143 SRYGFGAAFDIAAGLAGAGVTVVSGLAYGIDRQAHLGGLAGPGRSVAILGTGLDLVYPDA 202 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + + L GGA+VSEF PP A NFP RNRII+G+S GV+VVEAA RSGSL+TAR Sbjct: 203 NLDVWRELAA-GGAVVSEFAPGTPPRAANFPVRNRIIAGMSLGVMVVEAAERSGSLITAR 261 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFALPGP+ P G H L+ QGA LV ++I+ L L AP + Sbjct: 262 LALEQGREVFALPGPVNLPTFAGCHALLSQGARLVQTADDIVSALARELAPFVGAPRPAP 321 Query: 299 YSPDQQDVALPFPELLANVGDEV 321 + + V P A D Sbjct: 322 PARAPRRVTPPVAASQAAPPDRP 344 >UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY0_9BACT Length = 379 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 109/358 (30%), Positives = 174/358 (48%), Gaps = 10/358 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFL--SFPRKSIES 62 L+L + + M +I + + L+ G+ ++ + + ++ +S Sbjct: 10 LKLRCVRGVEETVMEKIYAGAGTLTGALKLDMGALRTYGIKKEISENIVTSNIDKQLFKS 69 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L LE+ ++ D E YP L T P LF G+ + +AVVGSR S Sbjct: 70 ELKALEECRADILCIDDEDYPEMLRQTVGAPCLLFARGDTASFKRPAIAVVGSRNASRAA 129 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R L G I SG A+GID AH A++ + AV+G G+N P+ + + Sbjct: 130 CDFSRRLACDLGEAGFNIVSGFAKGIDIHAHLGAVERGVTT-AVMGCGVNHFFPQDNLKH 188 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 +L + G +V+EF + P NFPRRNRIISGLS GV+VVEA+ RSGSL+TAR A E Sbjct: 189 LNKVLAK-GCVVTEFLSNCHPAQRNFPRRNRIISGLSFGVIVVEASDRSGSLITARLAGE 247 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QGR+VFA+P N + + L+K GAIL +++E L++ + L + + + Sbjct: 248 QGRDVFAVPAFPDNRNTA-TNALLKAGAILTESYFDVIEELKYQIGNLKEVDKQE--TSV 304 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +L + D ++ +G + VV L ++EL G++ G R Sbjct: 305 LEFGSPEQAKLFDLLMRGTLNPDELSAMSGFDIESVVINLAQMELEGYVFREIDGKYR 362 >UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTV0_9PROT Length = 371 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 109/361 (30%), Positives = 164/361 (45%), Gaps = 6/361 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL L R+ + + +G R+ + + Sbjct: 8 DETLAALRLARTVGLGPLTFRRLIDRFGSAIAVIRGL--DSGEIPRKGRSLALPSAAAAR 65 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L+ YP L A D P L + G L +A+VG+R S Sbjct: 66 AEWADAHGYGATLLSLTDPSYPTALRAIEDPPPVLTLLGRGDLLTRPAVAIVGARNASSA 125 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGIDG AHK AL+ +IAV+ G+++I+P HA Sbjct: 126 GLRLAETLAADLGEAGCVVVSGLARGIDGAAHKGALKTG--TIAVIAGGIDSIYPPDHAD 183 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ +Q G +++E + +FPRRNRI++GLS+ ++VVEAA RSG+L+TAR Sbjct: 184 LYRAIGKQ-GLILAEDAIGRRAKGQDFPRRNRIVAGLSRVIVVVEAAERSGTLITARMGN 242 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGRE+ A+PG +P S G + L++ GA L+ E++LE L+ P + Sbjct: 243 EQGREIGAVPGSPLDPRSAGTNRLLRSGATLIRHAEDVLELLEQEHRAQPITLQELPSPY 302 Query: 302 DQQDVALPFP-ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + + T DV+ G + LL+L L G I V GG Sbjct: 303 EAPQITEDLKERVRNLLSVTPTSRDVLLRETGLAPGTLADCLLDLLLDGHIEEVGGGAYA 362 Query: 361 L 361 L Sbjct: 363 L 363 >UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW70_RUBXD Length = 368 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 6/326 (1%) Query: 38 VLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGAL 96 + ++ GL + A +E L L ++ YP L D P AL Sbjct: 45 LEREYGLGAKDASELARLRETLDVEGVLRELAGRGISVLTPADAAYPHALREIPDPPPAL 104 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 FV+G L +AVVGSR S G R LA RGV + SGLA G+D AH+ A Sbjct: 105 FVDGALPV--GEAVAVVGSRKPSPGGLEVARRLGRALAGRGVCVISGLALGVDAAAHEGA 162 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L G ++ VLG G++ ++PR +ARL + GG +VSE+ L PPLA+ FP RNRII+ Sbjct: 163 LLAGGPTVGVLGCGIDVVYPRVNARLFGEVRAAGG-IVSEYYLGEPPLAWRFPARNRIIA 221 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 GL++ V+VVEAA RSG+L+TAR ALE GR+V+A+PGP+G G G + L+ GA ++ + Sbjct: 222 GLARVVVVVEAAERSGALITARHALESGRDVWAVPGPVGFAGCRGSNRLLADGAGVLWDI 281 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVP 336 E +E + G + +P + +L +G E P D VA+R G + Sbjct: 282 GEFVEAVAPGREGAAEE--AGGGAPPPPGLPAGEAAVLGALGFEPAPADEVAQRCGLAMG 339 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLR 362 +V++ L LEL G++ GG R Sbjct: 340 QVLSALSMLELKGYVVRDAGGGFVRR 365 >UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus RepID=C9B199_ENTCA Length = 292 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 2/280 (0%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-QAQRFLSFPRKSIESSLC 65 ++L + +I + ++ + + + + Q + + + Sbjct: 13 LIKLYYCQGIGLQGCWKIIWHWLETKEMNCSLEEMIAIGVLPQHRAVFRRSWERLTDEHI 72 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + + + S YP L D P LF EG L L + + VG+R S Y + Sbjct: 73 AQKMGAQNYLTFFSAEYPMLLRQIADPPLMLFYEGNLQLLQTTMIGFVGARTASLYARKV 132 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 L T TI SGLA G+D AH++A++ G +IAV+ +G++ +P RL Sbjct: 133 CEKLIPPLVTENYTIVSGLANGVDSFAHESAIRNRGQTIAVIASGMDHCYPSSSYRLFQQ 192 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + Q ++SE+P D P Y+FP RNRII+G+SKGV V+EA RSGSL+TA+ A+E GR Sbjct: 193 I-RQEHLVLSEYPHDTKPQRYHFPLRNRIIAGISKGVCVIEAKERSGSLITAQLAMENGR 251 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 EVFA+PG + + S+G H LI+ GA +IL+ L F Sbjct: 252 EVFAVPGEMISDQSKGCHRLIQDGAKCTISVSDILQELAF 291 >UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria RepID=A5VD04_SPHWW Length = 592 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 151/341 (44%), Gaps = 6/341 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + LRL+ + ++ A + P + E Sbjct: 234 NERLARLRLIRTPRIGPVAYSQLIRRFGSGVEALAALPALARRGGGALPAI--PPSAAAE 291 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + + YP L P L V G++ L +A+VG+R S Sbjct: 292 AEADRVARLGARHLFRGEAGYPALLDRIDTAPPVLIVRGDIALLDRRIVAIVGARNASGA 351 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R+ R L G + SGLARGID AH ++ + AV+ G++ ++P +A Sbjct: 352 AVRFARTLAHGLGEAGWLVVSGLARGIDTAAHAGSIATG--TAAVIAGGIDIVYPPENAA 409 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ E+ G L++E P V P A +FP RNRII+GL+ G +VVEAA +SGSL+TAR A Sbjct: 410 LQEAIAER-GLLIAEQPPGVEPRARHFPYRNRIIAGLAAGTVVVEAAPKSGSLITARLAA 468 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GREV A+PG +P ++G + LI++GA L+ +I E L +N +P Sbjct: 469 EFGREVMAVPGSPLDPRAQGCNLLIREGATLIQSAADIAEALSPIAGVAARPADNFASAP 528 Query: 302 DQQDVALPFPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + P L +G VD + ++G V Sbjct: 529 APAEADEPARAALTGLLGPVPLAVDELIRQSGVSAAMVQMV 569 >UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=C9BS90_ENTFC Length = 286 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 4/286 (1%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRK 58 M E L+L + +A+W+ + + + + R + Sbjct: 2 MYQIEENLLKLAYTKGISSQGKWALANWMMQYPYKEIGFEDIIKIGKITKHRELFRKSWQ 61 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 I ++ ++ I YPPQLL T P LF G+L L L+VVG R Sbjct: 62 EIHANWGKIQSKQ-SFITCFDPKYPPQLLHLTYPPIVLFYNGDLSLLSCNMLSVVGGRHT 120 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S ++ + + G I SG A+GID H+AA+ G +IAV+G G+ ++P Sbjct: 121 SALAKKTVYYLLKPVIEAGYVIVSGCAKGIDTYGHQAAISHGGRTIAVIGTGIEQVYPAE 180 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ L+SE+P P + FP RNRII+ LSKG V EA +SGSL+TA+ Sbjct: 181 NRDL-QEVIANDHLLLSEYPPQSGPKKHCFPMRNRIIAALSKGTCVFEAKKKSGSLITAQ 239 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 AL+ GR VF++PG I S G H LI+ GA+ E+IL + Sbjct: 240 QALDLGRTVFSVPGNILTEHSTGCHHLIQDGAVCTVSGEDILAEFK 285 >UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillus RepID=C7XU50_9LACO Length = 293 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 152/294 (51%), Gaps = 4/294 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRK 58 M E ++L L R+ A++ D + + + + +RFLS Sbjct: 1 MQPKEFLIKLNVCRGLGIISKYRLWEIAAERYEFDDMVTITRIANINGKVRERFLSAWSS 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E+ + LI YP L P L+ G H L S LAVVG+R Sbjct: 61 Q-ETETAYQRNCQMPLITIVDALYPELLKRIYCPPLVLYFMGNRHLLKSSCLAVVGARQM 119 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + Y + + + R +T+ SGLARG+DG++H+ LQ G +IAV+GNGLN I+P Sbjct: 120 TSYARQSLQQLLPPVIQRHITVVSGLARGVDGLSHEITLQHGGRTIAVVGNGLNRIYPPE 179 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H RL + ++ G L+SE+PLD P L ++F RNRII+GL+ L+VEA RSGSL+TA Sbjct: 180 HDRLQRQI-KRHGLLISEYPLDTPSLPHHFVERNRIIAGLADACLIVEARKRSGSLITAN 238 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 AL++ R V A+PGPI + S G + LI GA + +ILE L + L + Sbjct: 239 LALKENRNVLAIPGPINSEQSLGCNELIASGARPILNANDILEELGNRFYKLQN 292 >UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alphaproteobacteria RepID=Q28MI7_JANSC Length = 402 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 112/349 (32%), Positives = 170/349 (48%), Gaps = 9/349 (2%) Query: 16 LYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLI 75 + +R+ + + + Q++ P + + L + +I Sbjct: 57 VGPATYLRLLAEHGTAAAALDALPEVAA--AAGVQKYEVCPEPVVLAELRAAARVGARMI 114 Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L TD P L+ G + +A+VG+R S G R R TL Sbjct: 115 CLGDADYPETLAQITDAPPVLWAIGRTSLMARPCVALVGTRNASSLGARMTRKLAATLGE 174 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G T+ SGLARGID +AHK++L+ +IAV+ G++ ++P +A LAA + E G +S Sbjct: 175 AGFTVVSGLARGIDAIAHKSSLETG--TIAVVAGGVDVVYPTENAELAAQISET-GLCLS 231 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E PL + P A +FPRRNRI+SGL++GV+VVEAA RSGSL+TARCA +QGREV A+PG Sbjct: 232 EQPLGLQPQARHFPRRNRIVSGLAQGVIVVEAAARSGSLITARCAADQGREVMAVPGHPL 291 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQ----FGLHWLPDAPENSFYSPDQQDVALPFP 311 + + G + L++ GA LV ++++E L G E +P Sbjct: 292 DSRASGANILLRDGATLVRGVDDVIEALGRPAQSGDAPSAVVHELQRPTPAAAKDGGLEG 351 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LA++G D + E+ L LE++G + GG V Sbjct: 352 RILAHLGPTPVAEDQMIRDLNATPREMAQALAVLEMSGRVTRSAGGMVS 400 >UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSJ0_BACS4 Length = 289 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 149/287 (51%), Gaps = 6/287 (2%) Query: 1 MVDTEIWLRLMSISSLYG--DDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQRFLSFPR 57 M + + L Y + I S ++ L +Q + L++A++ + R Sbjct: 4 MKENLLLLH-YCCHGNYHLVKKISTINPTFLSLSTLEEKHLIEQLKIPLKRARQIIYLLR 62 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 SIE + N H + + YP L D P L+ +G L + L+VVG+R Sbjct: 63 NVSIEKLKEEYKNKNIHYVTIFDDDYPKLLKEIFDPPWILYYQGNSQYLSNTCLSVVGTR 122 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S R E + G+TI SGLA GID +AH+ ++ G +IAVLG GL+ ++P Sbjct: 123 HPSEIVYRELTEILEPVVKSGITIVSGLAIGIDSMAHELTMKKKGRTIAVLGYGLDWVYP 182 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + +L + Q +++E+P V P + FP RNRIISG SK VVEA +SGSL+T Sbjct: 183 KSNEQLLNDIKHQH-LVLTEYPPYVKPQRWQFPERNRIISGFSKATFVVEAQDKSGSLIT 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A A++Q R++FALPG I S G + LI+ GA ++ + ++ILE Sbjct: 242 ADLAVQQNRDIFALPGRIFEVTSVGTNKLIQDGAKMILQAKDILEEY 288 >UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUG3_9GAMM Length = 374 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 175/362 (48%), Gaps = 5/362 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQRFLSFPRKSIE 61 D WLRL+ L + + + A+ G L + + Sbjct: 11 DDARWLRLLDPDLLSPLQRRVLFSASLTPAELLALPPGDWPGGLTALRSTILGAIERPVA 70 Query: 62 SSLCWLEQPN--HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + L P+ HLI YP L +D P ALF G L AL +++VG+R S Sbjct: 71 AGLKCAAAPDAQVHLIALGDSLYPKLLRECSDAPPALFAVGRLAALGDPGVSIVGTRNAS 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 +G R G F +A+R + + SGLA GID AH+ A+ G +IAVL G++ ++P RH Sbjct: 131 LHGLRTGTEFAAFMASRNIVVVSGLALGIDAAAHRGAIDNGGSTIAVLPTGVDRVYPARH 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA ++ E+ GAL+SEF P NFPRRNR ISGL+ G LVVEA SG+L+TA Sbjct: 191 RALAEAITEK-GALISEFVPGTVPHPGNFPRRNRTISGLTPGTLVVEAGRPSGTLITATA 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A +QGREVFA+P + G EG L+ GA L P +++ +L G P Sbjct: 250 AAQQGREVFAVPWSRYHRGGEGCLALLSDGATLAHSPAQVVHDLAPGYAGQQLLPGVEAR 309 Query: 300 SPDQQDVALP-FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D+ + LLA +GD V+ +G + E ++ ELE+AG I G Sbjct: 310 AGDRSRCSADGEDPLLALIGDGCHIPQVLQRASGLRIHEFQRRITELEIAGLIERDTMGI 369 Query: 359 VR 360 R Sbjct: 370 RR 371 >UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella RepID=D1BMP3_VEIPT Length = 408 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 10/312 (3%) Query: 3 DTEIWLR-LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL------RQAQRFLSF 55 D I++ L S+ ++ + R V + L + S Sbjct: 5 DDNIYIAGLQSLYNVGATYVRRFIEDFGSPYDAWQAVKKVENLKPYTHISTADKRAIASS 64 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF--QLAV 112 + + ++ + +++ + + +P L + P LF+ G L ++A+ Sbjct: 65 AKDEKLDYIIHKIDEYKMDVTTFLDKDFPSILNHIYNPPAILFMRGNRVLLDKRLNRIAL 124 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG R+ + L I SG ARGID H+ L G I V+G GL+ Sbjct: 125 VGARRCSLYGRNVARMLGKELGKYSTIIVSGGARGIDTHGHEGLLASQGYGIIVMGCGLD 184 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR +A+L +L+ G L+SE+P PP A +FP RNRIISGL +GV+VVEA SG Sbjct: 185 ITYPRENAKLFDRMLQNNGLLLSEYPPGTPPSAKHFPARNRIISGLCRGVIVVEAKSSSG 244 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+TA A+ +GR+VF +P + + ++G +L++ GA ++T E+I+E L Sbjct: 245 SLITADMAVSEGRDVFVVPCNLLDHTADGNKFLMRNGAYVLTGYEDIVEQYHLTLREYFS 304 Query: 293 APENSFYSPDQQ 304 + + + +++ Sbjct: 305 SEQKLLPTKNKE 316 >UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP7_9BACE Length = 303 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 13/305 (4%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQR--- 51 MVD E L +I + + + + Q+ G +R + Sbjct: 1 MVDEEFCVYWLNNIRGIGNTKISELMAIFGSACGVYNAGEQELKDAMSGSNVRFSHGDFD 60 Query: 52 --FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 + + L YP +L D P L+ +G L + Sbjct: 61 NLIACRNAEWVRREYESLVAKQIAFTYPGRADYPVRLGMIYDAPHILYYKGHLPDA-APS 119 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+RA S YG + +F LA GV I SGLA GID +A+ + G + AVLG+ Sbjct: 120 VAIIGARACSAYGRQIAEMFGRELARAGVQIVSGLATGIDTFGQRASAEAGGRTFAVLGS 179 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G++ +PR + L A + GG ++SE+P P A NFP RNRIIS L+ V+VVEA Sbjct: 180 GVDVCYPRSNIGLYADTMIHGG-ILSEYPPGTKPSAGNFPVRNRIISALADVVVVVEARR 238 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 RSG+L+T ALEQ +++ A+PG +G+ SEG ++L+KQGA +VT+ +ILE L + Sbjct: 239 RSGTLITVDAALEQNKDIMAVPGRVGDVLSEGCNYLLKQGAHVVTQTRDILEILGINIIN 298 Query: 290 LPDAP 294 Sbjct: 299 KKRKK 303 >UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus RepID=C9S072_GEOSY Length = 293 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 141/294 (47%), Gaps = 9/294 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFL- 53 M D + + L + + + ++ L+ Q F Sbjct: 1 MYDTVRDRLIHLHHCRGAGWKTIHSLLKVDPTLTAPFSLPPNDLRPLVPLSDAQWTAFFH 60 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 ++ + + +I YPP L P L+ +G+ L +++ Sbjct: 61 DLHSIDVQRVIKTYKGRCIRVITVFDSDYPPLLKYIYAPPWVLYAKGDSALLQEWKLISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G L G TI SGLA GID AH+ A+Q G +IAV+ GL+ Sbjct: 121 VGTRRPTKEGIEALNKLVPPLVAAGFTIVSGLAFGIDVCAHQLAVQYGGSTIAVIAGGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P+ H A+LL +++E P P A+ FP RNRIISGLS G LVV+A +SG Sbjct: 181 HIYPKEHRP-FATLLMNEQLVIAEHPPATRPQAWQFPARNRIISGLSLGTLVVQAKRKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 SL+TA ALEQGREVFA+PGPIG S GP+ LI+ GA LV E +IL+ + Sbjct: 240 SLITAAYALEQGREVFAVPGPIGLAESAGPNTLIQHGAKLVQEAADILDEFPYV 293 >UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSA7_9CORY Length = 391 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 108/386 (27%), Positives = 162/386 (41%), Gaps = 30/386 (7%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA-VVLQQTGLTLRQAQRFLSFPRKS 59 M E W L + + + I A V + + L + + Sbjct: 1 MSSPESWAYLSRVIEGPSRHLQALLAAGRDADEIAAGVRARASWLGALARETESRYTFNQ 60 Query: 60 IESSLCWLEQPNHHLIPADSEFYPP----------------QLLATTD---YPGALFVEG 100 + L L+ D + +P L P AL+V G Sbjct: 61 PQRDLEAAHGAGFSLVTPDDQGWPAEAIADAFVTGVAVSQANLAEAKPDGVAPHALWVSG 120 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 L+ L + +A+VG+RA + YG LA G T+ SG A GID AH +AL Sbjct: 121 ETNLNQLFARSVAIVGTRASTAYGHHATADLVTGLAGFGYTVVSGGALGIDSTAHDSALA 180 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 ++AV G +PRR+A L + A+++E+P V P + F RNR+++GL Sbjct: 181 AGAPTVAVAACGPGVTYPRRNAELFRRVT----AVITEYPPGVTPDRHRFLTRNRLVAGL 236 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPE 277 S+G ++VEAA RSG+L T A R V A+PGPI PGS G + I++G A +V + Sbjct: 237 SQGSVIVEAAFRSGALNTLTWAHYFNRRVMAVPGPILGPGSLGTNLAIQEGRADMVLNAK 296 Query: 278 EILENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVT--PVDVVAERAGQP 334 +I L PDA E F + D Q ++ + V + +A R+G Sbjct: 297 QIHALLNRVGEVDPDAQLELDFAADDIQRLSRNELRVYDAVPLATRGATAEDIATRSGLG 356 Query: 335 VPEVVTQLLELELAGWIAAVPGGYVR 360 V V L+ELE G + + R Sbjct: 357 VALTVHILVELEARGLVVRTGRQWRR 382 >UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=3 Tax=Leuconostoc RepID=B1MYG1_LEUCK Length = 289 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 100/285 (35%), Positives = 145/285 (50%), Gaps = 1/285 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L L + R+ H++ + +T + +S Sbjct: 2 MNLRTQLLALTMTEGIGLVTRTRLLHFIISGNLPTQYPWSLETITRLAEPQQCMRIAQSY 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L + E YP L P LF EG L AL L+VVG+R + Sbjct: 62 DKALDRASTFQLPYLSYFDEAYPEALREIHQPPLILFYEGNLDALKLPSLSVVGTRLATP 121 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG R T+ ++G++I SGLA+GID +AH+ GV I V+G GL+ ++P RHA Sbjct: 122 YGLETIRHLLPTVISKGISIVSGLAQGIDVMAHQITFAACGVPIGVIGTGLDVVYPNRHA 181 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + G L+SE+P PL +FP RNRII+GLS LV+EA RSGSL+TA A Sbjct: 182 ALQKQI-ANSGLLISEYPAGSKPLRSHFPERNRIIAGLSSATLVIEAKKRSGSLITANLA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 L+ R+V A+PG I + ++G + L+ GA LV +PE+ILE++Q Sbjct: 241 LQNNRDVLAVPGSIFSETAQGTNELLSLGAKLVVQPEDILESVQL 285 >UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A932_9GAMM Length = 375 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 178/377 (47%), Gaps = 34/377 (9%) Query: 1 MVDTEIWLRLM----SISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQA------- 49 M + + L I L G + + + + Q + + + Sbjct: 4 MTREQFQILLSWSGARIQGLGG-----LLREYSSPDLLFSADWQSEPVKEQLSTLPNATQ 58 Query: 50 ----QRFLSFPRKSIESSLCWLEQPNHH--LIPADSEFYPPQLLATTDYPGALFVEGELH 103 + ++PR++ P IP +E YP L A D P LF +G+ Sbjct: 59 SMLLRARKNWPRRNP-RGYSSGSDPGGSQAFIPLGAEEYPDALYAIPDPPPWLFCQGDPA 117 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +A+VGSR S G R R LA G TI+SGLA GID AH+ AL+ G + Sbjct: 118 CLAQPAVAIVGSRRASHGGLRAAREIAGRLAAAGYTISSGLALGIDAAAHRGALET-GRT 176 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVL +GL P RH LAA + G +VSE P VPP + FPRRNRIISGL++ + Sbjct: 177 VAVLASGLEQASPLRHRALAAEIAAS-GCVVSELPGPVPPSKHQFPRRNRIISGLTQATI 235 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +VEAAL SGSL TA ALEQGREV+ LP I + G LI+ GA +T +++ Sbjct: 236 IVEAALPSGSLHTAAAALEQGREVYTLPWSIFHEQGAGCRRLIRDGATPITAMDDLSALF 295 Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLL 343 +P++ P +L +GD+ + + + VP+++ L Sbjct: 296 PGVAP---------VAAPEEIAPTGPAARILRLLGDDGLSLRALHDAMDMSVPDLLALLS 346 Query: 344 ELELAGWIAAVPGGYVR 360 +LE+ GW++++ G Y R Sbjct: 347 DLEVQGWLSSIDGRYCR 363 >UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C495A Length = 396 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 119/398 (29%), Positives = 175/398 (43%), Gaps = 38/398 (9%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-- 58 M D L L + L + + ++ + Sbjct: 1 MSDVNDHLALALVPGLGPKLTAALLERFGTAAAALRATAADLVQIPHIGEKLATALAAAL 60 Query: 59 ---SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +I+S L LE+ + S YP L A P L+V G A + +VG+ Sbjct: 61 RAVNIDSELALLERHGVRPVALGSSEYPAPLAAVPAPPPLLYVRGAWVAADVNAIGIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+R L G T+ SGLARGIDG AH+AAL G +IAVL GL++I+ Sbjct: 121 RSCTAYGKRLAEQISRDLVRAGFTVVSGLARGIDGAAHRAALAAGGRTIAVLAGGLSSIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P HA LAA + G LV+E P+ V P FP RNRIISGLS+G++V+EA +SG+L+ Sbjct: 181 PPEHADLAAE-VAGNGCLVTETPMAVAPQPGMFPARNRIISGLSRGIVVIEANAKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL----- 290 TA A EQGRE FA+PG + + S G L+++GA LV ++I+E+L+ Sbjct: 240 TATHAAEQGRETFAVPGNVDSAASAGCLELLRKGARLVRGADDIIEDLKGIATADYPAGS 299 Query: 291 --------------------------PDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 A P + + + + D+ Sbjct: 300 MDRGLAPAGTQYKGAQGHPSQEDAVTGRAVREDVPRPPAPILDVTQQRVFDALADK-RHA 358 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 D +A G V E+ L++LEL + +PG + R Sbjct: 359 DELARELGVAVGELSRILMQLELKKVLRRLPGNFYERR 396 >UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BL39_9BACT Length = 378 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 88/365 (24%), Positives = 150/365 (41%), Gaps = 14/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQR----FLSFPRKSIES 62 LRL ++ + +I L++++++ + K Sbjct: 12 LRLQALPGVGAKTARKIIAHYGSAHAFFESPRDSSIVLSVKESKTPSDYLHALYLKLATD 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 ++ + YP L +D P LF +G L +AVVG+R + G Sbjct: 72 EFDFILANKIQTFYFEDANYPYFLSLASDAPVLLFGKGHLDTGTKKIIAVVGTRKMTGMG 131 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + F E + I SG A+GID +AA + +I L +G I+P ++ Sbjct: 132 REFCEQFIEEIKPLDPVIVSGFAKGIDITIQRAAAEQGLQTIGCLAHGFKRIYPAQNRPY 191 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++EQGG +EF + L +F RNRII+GLS+ LVVE+A + G+L TA+ A Sbjct: 192 IKDVMEQGG-FYTEFFSGMHALPGHFVSRNRIIAGLSQATLVVESAKKGGALHTAQLANS 250 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQF------GLHWLPDAPE 295 R VFA+PG + S G + LIK A ++T +++ ++ + L+ Sbjct: 251 YDRPVFAVPGRTTDFFSVGCNDLIKHLKAQMLTHSRDLINSMNWQDQPGIVLNMGLTCGT 310 Query: 296 NSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + L + + VD +A + + L+ LEL G + + Sbjct: 311 ELETKDKATNHTAEESVLYQCLFSNGKMHVDQLASVLNWEIKVLYPCLMTLELKGGVRHL 370 Query: 355 PGGYV 359 PG + Sbjct: 371 PGQFY 375 >UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus RepID=A7GRG4_BACCN Length = 291 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 103/286 (36%), Positives = 156/286 (54%), Gaps = 7/286 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPR-K 58 E L L + + + ++ H + + +Q TGL+ + + ++F + Sbjct: 5 RERLLHLHYFLADHWKVLKKLLHMDPQLIDVYNFSSEQFEQYTGLSPKLSFELVNFLQTS 64 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 + + LE+ + E YP L D P L+ +G+ L + AVVG+R Sbjct: 65 TPPQCMQHLEKNQTFYVTIWDEDYPRLLREIPDPPFVLYGKGQRGYLKNINTFAVVGTRK 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S Y + + L +G I SG A GID +AH+ A++ G +IAVLG+GL ++P+ Sbjct: 125 PSLYSRESIQSILQPLINKGWLIVSGFASGIDTMAHRIAVEQEGATIAVLGHGLQYMYPK 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + RL ++ ++ L++E+P PP + FP+RNRIISGL KG+LV+EA RSGSL+TA Sbjct: 185 ENDRLY-AIWKKQMLLLTEYPPHYPPKKWYFPKRNRIISGLCKGILVIEAKARSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ REVFALPGPI + G + LI+QGA LV ++ILE Sbjct: 244 DFALEQNREVFALPGPIFVESACGTNQLIQQGAKLVQNAKDILEEF 289 >UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVG1_9ACTO Length = 462 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 176/416 (42%), Gaps = 51/416 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL--------------- 46 D + +I+ + ++ + ++ V L Sbjct: 49 EDRQARAAWTAIAQPGEPVVGQVIEHFGVREALERVKFLAAKLPEIDDMMIRTVFQPVQL 108 Query: 47 ----RQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG 100 Q + + R+ ++E L + L+ +P + + P AL+V G Sbjct: 109 PASVAQIEGWALRLRELNLEMEYQLLSRDGGALVVPGDAAWPGIVDSLGAVAPLALWVRG 168 Query: 101 ELHALHSFQ----LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 AL + +A+VG+R + YG + L+ RG+ + SG A GID AH+ A Sbjct: 169 NPQALQALASEGAVALVGARCATHYGTDIAQEIAYELSERGIWVISGGAYGIDAAAHRGA 228 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L +G +I+V GL ++P +ARL + + +Q GA+VSE P P + F RNRIIS Sbjct: 229 LASSGKTISVQAGGLGNLYPAMNARLFSQI-QQTGAIVSEAPPSQRPAKHLFLTRNRIIS 287 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 LS+ V+VVEA RSG++ TA EQGR+V A+PGP+ + S G H LI++GA LVT Sbjct: 288 ALSQVVVVVEAGERSGAMSTANHGAEQGRQVAAVPGPVSSTASVGCHRLIREGAALVTNA 347 Query: 277 EEILENLQF-----------------------GLHWLPDAPENSFYSPDQQDVALPFPEL 313 EI+E + + D+ ++ ++ Sbjct: 348 AEIMELMFPLNVAGQSLFGVGGSAGKSISGVVSVSPQRDSTGQIPAPSLFAGLSSDGVKV 407 Query: 314 LANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVR 368 + + ++ V+ AG V ++L +EL G + G RLR R Sbjct: 408 IDVLSKTAWKSLEQVSRAAGLGTRTVQSELGLMELDGKVETR-KGRYRLRSKATAR 462 >UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Bacillus halodurans RepID=Q9KA22_BACHD Length = 302 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 147/281 (52%), Gaps = 9/281 (3%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIESSL- 64 L S+ S+ + +I H+ + I Q GL+ ++A+ R+ Sbjct: 11 LASLPSMSRALLKKILHFDETLTVIFKQSHVQLSETYGLSTKKARHLYEHLRRVSTDFWS 70 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWYGE 123 + E+ + + YP L D P LF G ++ L+ +LA+VG+R S G Sbjct: 71 EYYEKKQIVPVTIFDKGYPNLLKEIYDPPFVLFCRGRMNTLYSEKRLAIVGTRKTSTTGL 130 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + L L G I SG A G+D AH+ ++ G +IAVL +G + ++P H A Sbjct: 131 KSLELLIPPLLQDGWVIVSGFAAGVDIHAHQLTVKNGGQTIAVLAHGHDNLYPAAHRPFA 190 Query: 184 A-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ Q ++SE+P V P + FP RNRIISGL G +V+EA +SGSL+TA ALE Sbjct: 191 EHEMVSQ--LMISEYPPYVKPRPWQFPERNRIISGLCAGTVVIEAKEKSGSLITADQALE 248 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 QGR+VFA+PG I N + G + LI+QGA L+ ++I+E L Sbjct: 249 QGRDVFAVPGAITNQKAAGTNQLIQQGAKLIQRADDIIEEL 289 >UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTI1_9SPIO Length = 318 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 4/285 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 ++++ L S L G + + +A + + + ++++ R S+ + +E Sbjct: 9 EKRKLYIALSYCSFLKGSERLLLARTLDTLQALTVSSIDTLSRIVQRSFRTRSYKPELLE 68 Query: 62 SSLCWLEQP----NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++ E ++ D +PP L D P L+ G L + A+VG+R Sbjct: 69 QAVEKAESLMKYCRINMTFYDDTDFPPLLREIPDAPFLLYYRGVLPKADTPAAAIVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + G+ + SGLARGID AH+ AL+ G++ AVL GL+ ++P+ Sbjct: 129 PTGNGIKAALQLGTECGHAGIPVISGLARGIDTFAHRGALEGGGLTTAVLACGLDRLYPQ 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +ARLA +LE GG ++SE+ PPLAY FP+RNR+ISGL++ +V+EA +SG+L+TA Sbjct: 189 SNARLAGRILETGGCILSEYAPGEPPLAYRFPQRNRLISGLARATVVIEAPAKSGALITA 248 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 ALEQGR+V G + + G L + GAI V ++L Sbjct: 249 DFALEQGRDVCIHGGMTDSVQNTGCKKLAEDGAIPVEHAGDLLRE 293 >UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LNF2_THEM4 Length = 264 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 146/256 (57%), Gaps = 11/256 (4%) Query: 33 HIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL-----CWLEQPNHHLIPADSEFYPPQLL 87 + + G +L++ ++ L+ ++ + L WL + + L+ E YP L Sbjct: 2 DLRIAIWHYLGHSLKEIRKKLALVKQVEKDELYFKLKSWLSKEGNFLVTYFDEDYPESLK 61 Query: 88 ATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARG 147 + P LF +G L A+VG+R + YG + F + L++ I SG+ARG Sbjct: 62 NIWNPPVVLFGKGNKELLSKKSFAIVGTRLPTEYGRKVAYSFSKRLSSY-FVIVSGMARG 120 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 ID AHK A + +IAVLGNG++ +P+ + L ++++ G +VSE+ P N Sbjct: 121 IDAFAHKNARE----TIAVLGNGVDYCYPKENRELYLKIIKE-GCVVSEYLPWERPRRDN 175 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F RNRII+G+S+GVL+VE L+SG+++TA AL+ G++VF +PG I + S+ P++LIK Sbjct: 176 FRARNRIIAGISEGVLIVEGKLKSGTMITANYALDFGKDVFCVPGNIYSENSQTPNFLIK 235 Query: 268 QGAILVTEPEEILENL 283 GA LVT P++I+E Sbjct: 236 NGAFLVTNPDDIVEYY 251 >UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella RepID=C8NEN5_9LACT Length = 288 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 13/290 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAK------QSHIDAVVLQQTGLTLRQAQRFLSF 55 ++ + + L + + + V T + + F Sbjct: 4 TKRKLLIGIAISEKLNSKQFYELFQKLNDDVSLIHPFVLGDVKFSLPEETSKWLETF--- 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +S ++ ++ YP +L P LF +GE L+ +A+VGS Sbjct: 61 ---DWLASFEKMKVEKVKVLTILDAEYPRRLKEIYLPPIVLFYKGEWSLLNERLVALVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS Y ++ + + L + + I SGLA+G+D +AH L+ +G +IAV+G+GL+ ++ Sbjct: 118 REHSNYAKQCTKTIVQDLVQKKIGIISGLAKGVDSLAHLECLKDDGKTIAVIGSGLDVVY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L + E+ G ++SE+PL PL ++FP RNRII+GLS GV VVEA RSGSL+ Sbjct: 178 PPENANLYKEIGEK-GLIISEYPLGSRPLKFHFPYRNRIIAGLSHGVCVVEANERSGSLI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 TA AL + REVFA+PG I + S+G + LI+ GA LV+ E I +NL + Sbjct: 237 TANIALSENREVFAIPGSIFSSHSKGTNQLIEAGACLVSSAETIDKNLHY 286 >UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Marinomonas sp. MED121 RepID=A3YCI7_9GAMM Length = 446 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 185/421 (43%), Gaps = 66/421 (15%) Query: 7 WLRLMSISSLYGDDMVRIAHWV----AKQSHIDAVVLQ------------------QTGL 44 WL L I + + R+ ++ Q I+A L+ Q + Sbjct: 20 WLTLSFIKGVGPARLDRLFTYIHSLETSQPKIEASKLKETINLELLLRLKWPLATAQEAI 79 Query: 45 TLRQAQRFLSFPRKSIESSLCWLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + Q R + + S+ WL+ P HHL+ YP +L P L+V G L Sbjct: 80 SYLQDGRVCDRLSEQLSSTQTWLDVSPQHHLLMRTERQYPDELRQIDVAPIFLYVTGNLK 139 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 AL + +LA+VG+R S YG + + + G+ + SG A GID AH+ AL G + Sbjct: 140 ALETKKLAMVGARKASQYGLETAYKLAQQIGSLGIGLVSGGAIGIDSAAHQGALAAAGST 199 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQG-GALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 I V+G+GL +P+ + L +LE G L+SE+PL A FP RNRIISGLS GV Sbjct: 200 IVVMGSGLLHPYPKSNQALFNRILETNSGCLMSEYPLHTKVQARLFPARNRIISGLSLGV 259 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 +VVEA +SGSL++A AL+ R+VFA+PG I + S+ LIKQGA L+T+ E+++ Sbjct: 260 IVVEAGFKSGSLISANYALQHNRDVFAVPGRITDKSSDACLDLIKQGAKLITQVEDVINE 319 Query: 283 LQF----------------------GLHWLPDAPENSFYSP------------DQQDVAL 308 L +A N D +++ Sbjct: 320 FSQLEIMSKLSPLIPHDLKMKKKINVYPRLQEAQNNDVSRETQVEIQKIPMLYDPNNMSE 379 Query: 309 PFPELLANVGDEVTPVD--------VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L + + + D + G + EV+ ++LEL I + GY R Sbjct: 380 SAIMVLNRIDEMLLEPDGKNEFELNQLVSMTGLAIDEVMQTCMQLELEELIDPLMTGYAR 439 Query: 361 L 361 Sbjct: 440 R 440 >UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BJ85_SANKS Length = 399 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 103/331 (31%), Positives = 154/331 (46%), Gaps = 13/331 (3%) Query: 40 QQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFV 98 + R A R + L L + L+ + + +P LL D P L+V Sbjct: 65 RLAAAVARWAPRVATT---DPARDLDNLARLGGRLVVPEDDEWPTGLLDLGDEGPACLWV 121 Query: 99 EG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 G + ++VVG+RA + YG+R L G T SG A GID V H++ Sbjct: 122 RGTGRVDETLRRTVSVVGARASTDYGDRVAGELSVGLVAAGCTTVSGGAYGIDAVVHRST 181 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L V+G ++A L G + ++P +A L +L+ G ++SE P P F RRNR+I+ Sbjct: 182 LAVDGTTVAFLAGGPDRLYPAGNADLLRGVLDGAGLVLSELPPGSVPSRVRFLRRNRLIA 241 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTE 275 + +VVEAA RSGSLVTAR A GR V A+PGP+ GS G H L+++G A+ VT+ Sbjct: 242 ASGRSTVVVEAAWRSGSLVTARLAAGIGRPVGAVPGPVTAAGSAGCHRLLREGVAVCVTD 301 Query: 276 PEEILENLQFGLHWL-----PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAE 329 +E+LE L A + + + + P + PVD + Sbjct: 302 VDEVLELSGAAGEGLDGIAATGALRDDADTRETDGLDAPGKAAYDALPLRRPVPVDALVR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +G E++ L LE+ G GG+ R Sbjct: 362 SSGLAPHELMAALGVLEVRGLAVRSTGGWSR 392 >UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TRF8_9MICO Length = 390 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 165/365 (45%), Gaps = 7/365 (1%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 E W R+ S + + V + W+A+ ++++ G +R + ++ + Sbjct: 30 ERWARMA-WSRIVEPETVSVRDWIAEHGAVESMQRLLAGSLVRDGRYDQRIAALDLDQAR 88 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWYGE 123 L++ ++ + +P L P ++ G +A+VGSRA + YG Sbjct: 89 RALDRLQVRVVIPGDDEWPLGLDELKVPPLCIYARGLCELSITDGSVAIVGSRAATHYGL 148 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 E LA RGVT+ SG A GID AH+ AL G +IAVL GL+ +P+ H L Sbjct: 149 NVAADLGEGLAQRGVTVVSGAAFGIDAAAHRGALAGGGPTIAVLARGLDRAYPQAHEGLL 208 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + + G +VSE PL P F RNR+I+ +S G +VVEA LRSGSL TA+ A Sbjct: 209 REIAD-IGVVVSELPLGWAPYRARFIARNRLIAAMSVGTVVVEAGLRSGSLNTAKYARSL 267 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQ-FGLHWLPDAPENSFYSP 301 R V A+PGP+ + S G H L+++ A LVT+ E+L+ + L + A Sbjct: 268 VRHVAAVPGPVTSVQSAGCHKLLRETEATLVTDAAEVLDVMGRLSLDAVGLARAPVTPES 327 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + VAL + + + +++ L L + G + V + ++ Sbjct: 328 ELDPVALGVWSAVPV--RNPADLAELQRLTALDPTTLLSALGRLTMLGLVVRVGERWRKV 385 Query: 362 RRACH 366 A Sbjct: 386 PAARR 390 >UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR54_9ACTO Length = 468 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 139/305 (45%), Gaps = 12/305 (3%) Query: 73 HLIPADSEFYPPQLLATTD-YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCE 131 + +P L D P L+ G+ L AVVGSR S YG + Sbjct: 165 GFVMPGDPLWPAALDDLGDTRPLGLWFRGDGKVLARAGAAVVGSRDSSPYGVKIATDVAY 224 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 LA GV + SG A GID AH+ AL +G ++AV G++ +P HA L +L +GG Sbjct: 225 ELADSGVNVVSGGAFGIDVAAHRGALAADGYTVAVSACGVDRYYPASHADLYLEILRRGG 284 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 A+ SE P P + F RNRII+ LS+ V+VVEA RSG++ TA A+ GR V A P Sbjct: 285 AICSEAPPGAAPHKHRFLSRNRIIAALSRAVVVVEAPFRSGAISTAHHAMSIGRPVGAFP 344 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE---------NSFYSPD 302 GP+ +P S G H L+++GA VT+ E+LE + + Sbjct: 345 GPVTSPRSSGCHRLLREGAACVTQIREVLELMGMEAKLGGQPGPGEPPTPGGLQTERQLA 404 Query: 303 QQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + P + VA AG V E +T L LE G A G + +L Sbjct: 405 LDVLDPLASRVCEALPVSRGAPAEKVAAVAGVSVTEALTGLGRLERQGIAARNAGLW-KL 463 Query: 362 RRACH 366 R Sbjct: 464 ARKGR 468 >UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58578 Length = 390 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 109/373 (29%), Positives = 169/373 (45%), Gaps = 20/373 (5%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS--IESSLC 65 L + + + +V + + A + G + R + R+S E L Sbjct: 17 LARAYLLGVAEPPAPHLLEFVGVRGPVAAAERVRAGDCPEKVLRETAARRESTIAEQDLE 76 Query: 66 WLEQPNHHLIPADSEFYPPQ-LLATT----------DYPGALFVEGE--LHALHSFQLAV 112 + L+ + +P LL+ P L+V GE L + +AV Sbjct: 77 AAAKVGARLVVPEDHEWPAWPLLSLAVASGNGVKNVAAPLGLWVRGEASLAEVADRAVAV 136 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG LATR V + SG A GID AH+ AL GV++A+LG ++ Sbjct: 137 VGARMATEYGLHNALEIGHALATRQVPVFSGAALGIDAAAHRGALSGGGVTVALLGCAVD 196 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P ++ L ++ +GGA+VSE+ PP + F RNR+I+GL+ G +VVEA +RSG Sbjct: 197 YSYPVGNSGLLDRIVAEGGAIVSEYAPKTPPARHRFLVRNRLIAGLTDGTVVVEAGIRSG 256 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLP 291 + TA A G+ V ALPG + + S G H LI+ A LVT +E+LE + P Sbjct: 257 ARNTATIAGALGKVVMALPGSVHSGSSAGCHALIRDCKATLVTSVDEVLETVGRFGTAAP 316 Query: 292 DAPENSFYSPDQQDVALPFPELLAN-VGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 A N + + + + + + VAE AG PV V L LE+ G+ Sbjct: 317 SAEPNRRPTDN---LGPEASRVYDALLPRAGRAPEEVAESAGVPVSRVRALLPALEVDGF 373 Query: 351 IAAVPGGYVRLRR 363 G+ ++ R Sbjct: 374 AVRGETGWRQIVR 386 >UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium jeikeium RepID=C8RTT5_CORJE Length = 396 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 24/354 (6%) Query: 32 SHIDAVVLQQTG-LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL---- 86 + A + ++ G L+ A + L+ + + +P +L Sbjct: 42 QAVAAALARRGGKLSEALAGSTSQRYEQDPTRDAELASARGWRLVTPEDDEWPAELTASF 101 Query: 87 --------------LATTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFC 130 P AL+V G+ L L + VVG+RA + YGE+ R F Sbjct: 102 VRMADSGADHDSSVRGQAAAPFALWVRGDARLDTLVRRSVTVVGTRAATRYGEQVTRSFA 161 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 LA G ++ SG A GID +AH+AAL ++ V+ GL+ +P+ HA L ++ G Sbjct: 162 GDLADAGFSLISGGAIGIDAIAHRAALDSKMPTVVVMACGLDVSYPKAHANLFEQIVGSG 221 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G L+SE+P PP + F RNR+ + L + LVVEA RSG+L T A + +FA+ Sbjct: 222 GMLISEYPPGTPPARHRFLTRNRLAAALGQATLVVEAPQRSGALNTLNWAEAFVKPIFAV 281 Query: 251 PGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLH--WLPDAPENSFYSPDQQDVA 307 PGP+ + S G I+ A L +++E L L E+ + P + +A Sbjct: 282 PGPVTSHASLGCLDRIRTARATLAVSARDLIEELTPLGEQMALGLGQEDRSFLPSWEHLA 341 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + L + + + E G P V+ L +LE G + ++R+ Sbjct: 342 IIDAAALPSGKGPEGRLPQLVEATGLPARTVIRCLRDLEAMGRLRREADRWIRV 395 >UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD6_WEIPA Length = 288 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 99/286 (34%), Positives = 145/286 (50%), Gaps = 5/286 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQR-FLSFPR 57 M + L L+ I L RI ++ ++ + + QQ +RQ+QR ++ Sbjct: 1 MAQRDFLLWLLMIPGLSIKGRYRIWIYLK-ENKLSKLSWQQILTISKMRQSQRNEATYWF 59 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K + + W + + I YP L D P LF +G+L L +A+VGSR Sbjct: 60 KEMNWQVEWHKLQDQTYIAICDAAYPITLSECIDAPICLFYKGDLSLLVQPLVAIVGSRQ 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + + L G+T SGLA GID + H+ L+ NG +IA++G G + +P+ Sbjct: 120 ATAYGISVLKSWIPGLTAAGLTTVSGLAAGIDELTHRETLKANGQTIAIIGTGFDYAYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H + + Q G L+SE+ P ++FP RNRIISGL + LV+EA RSGSL+TA Sbjct: 180 -HCEDLQNTISQLGLLLSEYLPWQGPKRHHFPERNRIISGLCQVCLVIEAKKRSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ R V ALPG I S G + LI GA V ++I+ Sbjct: 239 MLALEQNRTVMALPGRIDGQYSVGTNELILAGATPVLSVDQIVLEF 284 >UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH10_9ACTN Length = 434 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 23/350 (6%) Query: 31 QSHIDAVVLQQTGLTLRQA-QRFLSFPRKS-IESSLCWLEQPNHHLIPADSEFYPPQLLA 88 + + A +G +RQA R++ + +L + L+ D +P +L Sbjct: 77 ATELSADGDPVSGDDMRQAIDRWMPRLKSDTALIALRQAARFGSRLLIPDDSLWPERLHD 136 Query: 89 TT-DYPGALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 P AL+V G AL +A+VG+RA + YGE L RG TI SG A Sbjct: 137 LDWHAPSALWVRGTDAALAGIVDGIALVGARAATGYGEHITMEASAGLVDRGYTIVSGAA 196 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 GIDG+AH+AAL +G+++A L G++ +P H L + ++E GA++SE P PP Sbjct: 197 YGIDGMAHRAALASHGLTVAFLAGGVDRFYPSGHDSLLSRIVE-NGAVISELPCGSPPTK 255 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 + F +RNR+I+ S +V+EA RSGSL TA A GR + A+PGP+ + S G H L Sbjct: 256 WRFLQRNRLIAAASIATIVLEAGWRSGSLNTAGHAAALGRPLGAVPGPVTSAASAGCHRL 315 Query: 266 IKQ-GAILVTEPEEILENLQFGLHWLPDA----PENSFYSPDQQDVALPFP--------- 311 I+ A+ VT P+++ E DA PE+ + + + P Sbjct: 316 IRDYDAVCVTNPDQMAELAPLDRAPETDATMTTPESQPPTNLPPESSAPKVDADSPPSTE 375 Query: 312 --ELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 LL + D +A R+G + V L LEL G + G+ Sbjct: 376 TTRLLDALSVRSARTADDIASRSGLALATVRAHLGLLELDGRVVESERGW 425 >UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6D8_THEAS Length = 361 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 105/330 (31%), Positives = 152/330 (46%), Gaps = 17/330 (5%) Query: 37 VVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGA 95 L++ G R R L ++ E YP LL +D P A Sbjct: 42 AALEEAGFPRGGWSRVEEAMRTGWARRELDRASSMGIGVLALGEEGYPESLLELSDPPAA 101 Query: 96 LFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 L+V G + ++VVG+R S YG + E A + SG A GIDG AH Sbjct: 102 LYVRGTRGIPLRPQGAVSVVGTRRASTYGLKVAMAVGERCAGSSLWTVSGGAMGIDGAAH 161 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + AL G++ AVLGNG++ + P H L L+ + G LVSE+PL + FP RNR Sbjct: 162 QGALSKGGLTCAVLGNGVDVVFPADHRELFE-LVARDGCLVSEYPLGTKGSQWRFPMRNR 220 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILV 273 II+ LS ++VVEA RSG+L+TA AL+ GREV+A+PG IG G + LI GA+ + Sbjct: 221 IIAALSARLVVVEAPERSGALITASRALDLGREVWAVPGKIGEAQCRGSNLLIYDGAMPL 280 Query: 274 TEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 + L L E+ S + +++A+ GD VD +A Sbjct: 281 VD-----------LDLLFPPGEDRGSSRQVDPLEGAILQVMASEGD--WTVDKLALECKI 327 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 +++++L LE G + G L Sbjct: 328 GAADLLSRLAILEARGLVYRSSPGRYSLSP 357 >UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus plantarum RepID=C6VQH8_LACPJ Length = 288 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 7/291 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + +RL + MVR+ + + + LT Q RF + + Sbjct: 1 MQLRSLLIRLHLAHGIGYAGMVRVLQHCRQVQTVVTDPRRLGKLAHLTASQQGRFTADWQ 60 Query: 58 KSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q + + + YPP LL P LF+ G+ L + QLAVVG+R Sbjct: 61 SMAFQQRLKRHAQLDI--LTILDDDYPPALLEAYQPPLVLFLRGQRALLTTRQLAVVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y ER LAT +TI SGLA+G DG AH+ AL+ N +I V+G GL+ +P Sbjct: 119 QATSYAERVTTQLLAPLATAKLTIVSGLAKGADGFAHRTALRFNLPTIGVIGTGLDISYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R+H L + Q G L+SE+PL V P Y+F RNRII+GL + V+VVEA SGSL+T Sbjct: 179 RQHRDLQQQI-SQVGLLISEYPLGVGPEPYHFVARNRIIAGLCQTVIVVEAQAHSGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 A +L+ R V A+PGPI P S G + LI GA V I+E + Sbjct: 238 ANISLQNNRNVLAVPGPIDAPFSVGCNQLIVAGAKPVLNSRHIIEEFLPKI 288 >UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZG0_9ACTO Length = 445 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 107/368 (29%), Positives = 153/368 (41%), Gaps = 20/368 (5%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLE 68 L + + + D + GL R + R P L Sbjct: 81 ALSRVIEPGDPAALTTFAGLTPLEIWDLLHSTAPGL-ERWSTRL---PHVDPARDLDRAH 136 Query: 69 QPNHHLIPADSEFYPPQLLATTDY---------PGALFVEG--ELHALHSFQLAVVGSRA 117 I + +P QL TD P L+V G L L + +A+VG+RA Sbjct: 137 AAGGRFIIPGDDEWPDQLEVLTDAGQQSRRGGVPFGLWVRGTPNLRELLANSVAIVGARA 196 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YGE L G + SG A GID AH+ AL +G +IAVL G++ +P+ Sbjct: 197 CSSYGEHTAAELAAGLGDHGTAVVSGGAYGIDAAAHRGALASSGTTIAVLACGVDVSYPK 256 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R++ L + + G L+SE P P F RNR+I+ + G +VVEAA+RSG+L +A Sbjct: 257 RNSALFDRIAAE-GLLLSELPPGCSPTKLRFLARNRLIAAATLGTVVVEAAIRSGALNSA 315 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPEN 296 A + GR V A+PG + + SEG H LI++ A L T +ILE + L P Sbjct: 316 GWAEQCGRAVLAVPGAVTSRMSEGAHLLIRERNATLATSVADILEAISPLGEHLTTYPH- 374 Query: 297 SFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + L V P +A AG + V L L+ A I P Sbjct: 375 -AAPTPIDALDHDLRRTLDAVPVLRPAPAHRIAITAGLDLATVQECLETLDQAHLIEYTP 433 Query: 356 GGYVRLRR 363 G+ R+ Sbjct: 434 TGWHLTRQ 441 >UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QA47_CATAD Length = 600 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 109/380 (28%), Positives = 162/380 (42%), Gaps = 25/380 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV------------LQQTGLTLRQAQ 50 D L L S + R+ + A++ + Sbjct: 216 DRRARLVLHHASEPGDALLCRLVARFGAPTVATALLSGSAADLLSAHDEESAADRAALIS 275 Query: 51 RFLSFP----RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELH 103 R + R ++ L E+ + + +P L D P ++ G +L Sbjct: 276 RAHTLQTRCYRADPDADLAVSEKTGARYVIPADDAWPTALDDLGDAAPLGMWFLGTADLV 335 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 A +++VG+R + YG LA RG I SG ARGIDG AH+ AL GV+ Sbjct: 336 AASRRGVSIVGARIATGYGMHVAGELAAGLAERGWAIISGAARGIDGAAHRGALAARGVT 395 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A L G++ ++P H L ++ + G ++SE P + F RNR+I+ L G + Sbjct: 396 VAALACGIDLVYPAGHEALIGAIASE-GLVLSELPPGTAVSRFRFLDRNRVIAALGLGTV 454 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEAA RSGSLVTAR A GR V A+PGP+ + SEG H LI+ GA+LVT E++E+L Sbjct: 455 VVEAAARSGSLVTARLADSLGRPVLAVPGPVTSEASEGTHQLIRDGALLVTRAAEVVEHL 514 Query: 284 QFGLHWL--PDAPENSFYSPDQQDVALPFPELLANVGDEVT-PVDVV--AERAGQPVPEV 338 L P + + + +L + +D V A AG V Sbjct: 515 GDLGADLAEPTTTARTSSRRPRDSLDPIAARVLDALPIAGRGTLDTVEAALAAGLEPRAV 574 Query: 339 VTQLLELELAGWIAAVPGGY 358 L L AGW+ G+ Sbjct: 575 HAALGRLTTAGWVDRDERGW 594 >UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAQ9_9DELT Length = 439 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 112/310 (36%), Positives = 142/310 (45%), Gaps = 5/310 (1%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQR-FLSFPRKSIES 62 L L L + +A A+ R E Sbjct: 9 ACLALRHTPRLGPKVWKPLLSHYGSAFEAVREAASWPADVAPRSMARACKAEVWRDKAEE 68 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + +I +P L D P L+ G+L L + +AVVG+R + G Sbjct: 69 EYRAAIRAGMTVITWFDVRFPDALREIEDPPCLLYASGDLTLLKNPGVAVVGARECTALG 128 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 L+ G+T+ SGLA GID AH L G SIAVLG GL+ +P + + Sbjct: 129 LDAAGRISSQLSRIGITVISGLAMGIDRQAHLGGLSGIGGSIAVLGCGLDVDYPHDNHDV 188 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + LE G +V+EF V P A NFP RNRIIS LS GVLV EAA SGSL+TAR A E Sbjct: 189 RRA-LETRGLVVTEFGPGVTPRAGNFPFRNRIISALSLGVLVAEAAHNSGSLITARLAGE 247 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-WLPDAPENSFYSP 301 QGREVFALPGP+G P G H LIKQGA LV E+I+E L++ L P+ + Sbjct: 248 QGREVFALPGPLGQPTFTGCHRLIKQGAALVESAEDIVEILRYDFARELAHIPDPEPVAE 307 Query: 302 DQQDVALPFP 311 V P Sbjct: 308 ADNRVDAVEP 317 Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 1/82 (1%) Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQL 342 + + +LLA + G + +D + G V L Sbjct: 350 GADAGESRTRKRPGAARRSEMTLNDEERQLLAVLDGTDRVHIDTLGRTLGWESSRVSRVL 409 Query: 343 LELELAGWIAAVPGGYVRLRRA 364 L LE+ G + +PG + R A Sbjct: 410 LMLEVGGAVHQLPGMWYMAREA 431 >UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomycetales RepID=A0LV60_ACIC1 Length = 391 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 19/363 (5%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-FPRKSIESSLCWLE 68 L ++ ++ + A + L++ L + A+ + + E+ L +E Sbjct: 32 LSRVTEPGDRELAALLTRYAATEIVRD--LRRDRLPVTNARHWRTRLSTARPEADLHAVE 89 Query: 69 QPNHHLIPADSEFYPPQLLATTD-------YPGALFVEGELHALH-SFQLAVVGSRAHSW 120 + + +P QL P L++ G +AVVGSRA + Sbjct: 90 RLGGCFVVPGDSEWPAQLDDLGRVPGEYSVPPVGLWLRGAGKLADADRTIAVVGSRAATG 149 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE F LA RG + SG A GID AH+ AL G ++AVL G++ +PR +A Sbjct: 150 YGEYVAAEFAIGLAERGFLVVSGGAYGIDAAAHRGALAGGGATVAVLACGVDVCYPRGNA 209 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L +L G L+SE+P P+ + F RNR+I+ L+ G +VVEAA RSG+L TA A Sbjct: 210 TLFHRILST-GLLLSEWPPGCAPMRHRFLVRNRVIAALASGTIVVEAAARSGALNTANRA 268 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILEN---LQFGLHWLPDAPEN 296 + GR V A+PGP+ +P S G + L+++ +T ++++E L + P AP + Sbjct: 269 RDLGRHVMAVPGPVTSPLSAGSNQLLREPDVCCITRADDVVEIVGRLDPSIAPTPGAPPS 328 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S + A + A AG +P+V+ L L G + Sbjct: 329 SARDRLDGVTRRVLDAVPARRSAGPAGI---ALAAGLALPDVLAALGRLAADGLVERTDA 385 Query: 357 GYV 359 G+ Sbjct: 386 GWR 388 >UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus salivarius RepID=Q1WU06_LACS1 Length = 286 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 3/287 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSFPRK 58 M + +R S YG + +A+++ + + + ++ L+ ++ +++++ Sbjct: 1 MELRDFLIRAHICSQYYGGSVKNVAYFMNEIQKLPTEEEFIKLLKLSEKKIGKYMAYFLS 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + + E YP L + P F G L++ LA+VG+R H Sbjct: 61 DGLTKEVEENKNYGGICTIFDEDYPVLLKEIYNPPLVFFYNGNFSLLNAPTLAIVGARKH 120 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S Y + + + G+ SGLA+GID + HK L G +I V+G GL+ +PR Sbjct: 121 SPYAKEVLKKLLPDILDEGIATVSGLAKGIDSLTHKITLSEKGKTIGVIGTGLDRTYPRE 180 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L A++ E+ G ++SE+ L PL ++FP RNRIISGL + +LVVEA +SGSL+TA Sbjct: 181 NFELQANM-EKEGIVLSEYALGQKPLRFHFPARNRIISGLCQSLLVVEARRQSGSLITAN 239 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 AL++ R V A+PG I + SEG + LI +GA + E+ILE + Sbjct: 240 MALQENRNVLAVPGNINSILSEGCNELILEGAKPILRAEDILEEFKI 286 >UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9M9_9CHLA Length = 320 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 8/299 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFP 56 M D L I L + + + ++ G + + ++ Sbjct: 1 MDDLIALSILTQIPYLGSVKIRLLIGYFGSALTALEAEVKVIETILGTKSKCLPYWTTWK 60 Query: 57 RKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + +L + +L+ + YP QLL +D+P L+V+G+ +A++GS Sbjct: 61 ENDDWKRNLELAAKEGVYLVSYTDQAYPQQLLQISDFPVLLYVKGKWPIEQFKGVAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG F LA G+ + SGLA+G+D AH+ ALQ G ++AV+G+GL+ ++ Sbjct: 121 RQASQYGRELAYSFGMDLAGLGIVVVSGLAKGVDTAAHQGALQT-GKTLAVIGSGLSHLY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA L+E+ GA+++E+P+ PP NFP+RNRI+SGL++ V+++EA + SG+++ Sbjct: 180 PYENRDLA-RLIEREGAVITEYPMLTPPNRQNFPQRNRIVSGLAEAVVLIEAPVVSGAML 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 T R + QG+++ +PG G H LI++G A V ++I+ + GL Sbjct: 239 TMRKGILQGKKLLVIPGRANEDSFSGNHLLIEEGKAHPVKSAKDIMAQVDKGLRSKEQQ 297 >UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB2_CORK4 Length = 435 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 25/386 (6%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQAQRFLSFP-RKSIE 61 W L + ++ + + + A + + L + S Sbjct: 51 AWAYLNRVVEGPNAHLLALIWESGESDPVSAAIRIIRRDPSLPPKVLSATESRCGWFQPL 110 Query: 62 SSLCWLEQPNHHLIPADSEFYP-PQLLATTD----------------YPGALFVEG-ELH 103 + L I D + +P P L + P L+V+G Sbjct: 111 ADLHSAASVGACFITPDDDAWPGPVLAESFHVSRTADGAKSHHDDAIPPHGLWVKGGNAR 170 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 AL + VVG+RA + YG AT G T+ SG A GID AH+AAL+V + Sbjct: 171 ALTEKAITVVGTRAATRYGNAVAADIGAECATHGWTVVSGGAFGIDISAHRAALRVGHST 230 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A++ +G++ +P H + + G +++E+P P + F RNR+ + L +GV+ Sbjct: 231 VAIVAHGIDVTYPAAHRTEFNDI-AREGVVITEYPPGTRPARHRFLTRNRLSAALGQGVV 289 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILEN 282 V+EA RSG+L T A G++VFA+PG + + S G H LI++G A L+ +++E+ Sbjct: 290 VIEAGYRSGALNTVSWAETMGKQVFAVPGAVTSRSSHGCHRLIREGRAELIESGADLIES 349 Query: 283 LQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 L DA E + + D Q + P + V + + +A +G P+ + +T Sbjct: 350 LSPLGTLDSDAQLEMDYPATDVQRLDRPSLRVYDAVSGKRSDAAAIAASSGLPLVQTMTI 409 Query: 342 LLELELAGWIAAVPGGYVRLRRACHV 367 L EL G I+ + R A V Sbjct: 410 LCELRDKGLISRSGNLWERDTAASTV 435 >UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU Length = 297 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 13/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + L + I+ L + + W + +T Q + + + I Sbjct: 1 MDQAAVCLTICRINQLLSPSL--LLKWWKADPSMSLTSPVLQTVTRDQIKA--AALKNEI 56 Query: 61 ES-------SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 E L + + IP S+ YP L + D P LF +G++ L ++ + Sbjct: 57 EQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGI 116 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG++ + + +G I SGLA GIDG++H A+++ G +I V+ G Sbjct: 117 VGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQ 176 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+PR + +LA + + L+SE P + P ++FP RNRIISGLS+GV+VV+ +SG Sbjct: 177 HIYPRENLQLADHM-AKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSG 235 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 SL+TA ALEQGREVFA+PG + +P + GP LI+QGA + E+I E L Sbjct: 236 SLITAYQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELP 287 >UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE20_THEAB Length = 266 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 139/241 (57%), Gaps = 12/241 (4%) Query: 44 LTLRQAQRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + + QR +K IES L WLE + ++ + Y L P LF +G + Sbjct: 24 IKSKDIQR-----KKFIESKLTRWLEFSGNGILTFFDDEYHEYLKNIWKPPVVLFYKGNI 78 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 H L +VVG+R+ + YG+ F + L+ I SG+A GID AHK + Q Sbjct: 79 HLLKKNCFSVVGTRSMTAYGKSITEKFVKKLSDF-FVIVSGMAIGIDTEAHKNSKQ---- 133 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IAVLG G++ +P+++ + + + G L+SE+ P + FP RNRII+G+S+GV Sbjct: 134 TIAVLGCGVDICYPKQNKYIYDKI-SKEGCLISEYLPWENPKKHYFPLRNRIIAGISEGV 192 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVE +SG+++TA A++ G+++F +PG I + SEGP++LIK GA VT+P+EIL+ Sbjct: 193 LVVECKKKSGTMITANYAIDFGKDLFTVPGNIFSLNSEGPNFLIKNGAYPVTDPDEILDF 252 Query: 283 L 283 Sbjct: 253 Y 253 >UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC Length = 298 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 159/295 (53%), Gaps = 19/295 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIA-----------HWVAKQSHIDAVVLQQTGLTLRQAQR 51 DT+ L L + L + R+ + ++I + + R ++ Sbjct: 6 DTQRLLALHYVYPLPLQKLQRLLSPVNVLNTFEEAHYGEIANILQISAHKALQISRSFRQ 65 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-L 110 ++ P + + N IP ++P QL + P L+V+G L + + + Sbjct: 66 IMTIPFEEA------YTRANIFPIPFYHPYFPAQLFEISSPPTVLYVKGRYSLLTNKKQI 119 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A++GSR + Y +R L L G T+ SGLARG D +AH+A + + G ++AVLG+G Sbjct: 120 AIIGSRKATAYSKRALDLIVPPLVQCGYTVVSGLARGADTMAHRATIDMGGHTMAVLGHG 179 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 N ++PR + LA + +Q L++E+P + P ++FP RNRIISGL++ ++V EAA++ Sbjct: 180 FNYLYPRENQVLAMDMADQQ-LLITEYPPYMKPEKWHFPMRNRIISGLAQALVVTEAAIK 238 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 SG+L+TA ALEQG+++F +PGPI S+G + L+ +GAI V +I+E L Sbjct: 239 SGTLITAELALEQGKDIFVVPGPIDAAQSKGTNQLLVEGAIPVMNGHQIVETLDL 293 >UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY7_9BACI Length = 308 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 15/302 (4%) Query: 4 TEIWLRLMSISSLYGDDM---------VRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS 54 E + L S + + + +S V ++ L + Q Sbjct: 8 RERLIHLHYCSG-GDSEFVCKVLVKDPELLLMYGWSESEWLRVFPKRRSLAPQVFQGLSK 66 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVV 113 P I SSL + +I + + YP L D P L+ +G + L + LA+V Sbjct: 67 RPYHLIASSLS---EKGIQVITVEDDAYPKLLKEIYDPPLCLYTKGNVAYLTMASYLAIV 123 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S Y + L G+ I SG+A G+D AH+ A+ + +IAVL G + Sbjct: 124 GTRWPSGYASQAIDFLMAPLKESGIVIVSGMAEGVDTQAHRKAMSLGLPTIAVLAFGFDH 183 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P ++ L A L+ +V+EFP + ++FP+RNR+ISGL + VL+ EA RSGS Sbjct: 184 LYPAKNRDLYAR-LQTDELVVTEFPPYMKAEKWHFPKRNRLISGLCQAVLITEAKKRSGS 242 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA CA+ Q R+VF++PG I NP SEG + LI+QGA L+ E++L + Sbjct: 243 LITADCAMSQNRDVFSIPGRIDNPVSEGTNRLIQQGAKLILTGEDLLNEFPESESAGKKS 302 Query: 294 PE 295 E Sbjct: 303 KE 304 >UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Rothia mucilaginosa RepID=D2NTN3_9MICC Length = 613 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 15/328 (4%) Query: 51 RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEGE----LHAL 105 R+ +++ + L+ +PPQL P L+ G+ L Sbjct: 284 RWNRRMERTLNAEAHMAATCGAWLVTPADPLWPPQLNDLGPARPYGLWCRGDSRHLLDVA 343 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN---GV 162 + +A+VGSR S YG LA RG T+ SG A GID AH+AAL Sbjct: 344 SAPSVALVGSRDPSIYGTEATTHLAAELARRGYTVISGGAMGIDIAAHRAALTQQSSDLP 403 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IA + GL+ ++P +++ ++++ G ++SE + P + F RNR+I+ L++ Sbjct: 404 TIAFMAGGLDRLYPAQNSDALNMIVDR-GLIMSEVSVGNTPTRWRFLERNRLIAALARHT 462 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 +VVEA RSG+L TAR A+E GR ++A+PG I +P S G + L++ G A +TE +ILE Sbjct: 463 IVVEARWRSGALNTARHAMEIGRTLWAVPGQINSPNSVGTNRLLRDGLAQTLTEAADILE 522 Query: 282 NLQFGLHWLPDAPENS----FYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVP 336 L E+ S ++ + ++ VD +A G Sbjct: 523 YDAAAGFELGTEHESEWDQAASSSALDELTERQGRVWDDLSPRSYRGVDEIAAALGLSAR 582 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLRRA 364 +V+ L L G + + ++R A Sbjct: 583 DVMADLFHLGRCGLAESSGTSWRKVRPA 610 >UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTX1_9CORY Length = 398 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 94/392 (23%), Positives = 154/392 (39%), Gaps = 37/392 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-FPRKSIES 62 E W L + ++ + I + + S + Sbjct: 6 LESWAYLNRVVEGPNRHLLAHLNAGRDADEIAHGIRTRASWLGELGPATESRYTWDRPAE 65 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATT---------------------------DYPGA 95 L Q + LI + +P P + Sbjct: 66 DLEEAAQHGYSLITPEHPEWPA--DEIAASFGSALSKQERGLGPAADEEPLPPEGYPPHS 123 Query: 96 LFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 L+ G L L + + +VG+RA S YG C LA TI SG A GID VAH Sbjct: 124 LWARGNTNLAQLFAQSVGIVGTRAASAYGHHATADLCTGLARHRYTIVSGGALGIDTVAH 183 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + AL +++ V G I+P+R+ +L + +GGA+V+E+P + P + F RNR Sbjct: 184 ETALNNQALTVVVAACGPGQIYPKRNGKLFDRIAAEGGAIVTEYPPGMTPDRHRFLTRNR 243 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAIL 272 +++ L++G +VVEAA RSG+L T + R A+PGPI PGS G + I+ A + Sbjct: 244 LVAALTQGSIVVEAAFRSGALNTLKWVKTYNRVPLAVPGPILGPGSLGTNLAIRNDRADM 303 Query: 273 VTEPEEILENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANV---GDEVTPVDVVA 328 V ++ + L D E F + Q ++ + ++ G + VA Sbjct: 304 VLSADDAHQQLGAIGSTDADGQLEIDFEADAIQKLSRNELRVYDSLPVAGAGGIDAEAVA 363 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + +G + V L++L G + + R Sbjct: 364 QASGFTIALAVHLLMDLHKKGLVVRKGKMWER 395 >UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03S82_LACBA Length = 296 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 143/287 (49%), Gaps = 9/287 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-------QQTGLTLRQAQRFLSFP 56 + +LRL ++ + HW+ + I A+ Q+ ++ + Q Sbjct: 6 RDFFLRLPLLTGVGQQTRRACWHWLTEHPTITALTPADLNRLCQEAAISADRTQLLQQVF 65 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + Q + + YP QL T P L+ G+L L QLAVVGSR Sbjct: 66 TSQLAKRV-TENQRHTGCLTIVDAAYPEQLRETYAPPVVLYYLGDLRWLTGPQLAVVGSR 124 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y R R + + V + SGLA+G+D +AH+AAL G +IAV+G GL+ +P Sbjct: 125 QPSPYALRAMRRLLPQVVRQQVCLVSGLAQGVDTLAHQAALAHRGKTIAVIGTGLDHCYP 184 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L L ++SE+P ++FP RNRII+GLS+ LVVEAA SGSL+T Sbjct: 185 AGNRDLMTE-LAHHHLVISEYPWGTAGARHHFPERNRIIAGLSQSTLVVEAARHSGSLIT 243 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL++ R V A+PG + NP S G + LI GA + E I+E + Sbjct: 244 ANIALQENRNVLAVPGSLDNPNSVGTNELILAGAKPILNSEHIIEEV 290 >UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermophilus RepID=Q72GH5_THET2 Length = 334 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 159/353 (45%), Gaps = 26/353 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + ++ + + + R L E Sbjct: 4 LALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAW--------RHLPEAEAQAERERRRA 55 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E L+ E +P L A P L+++GEL +A+VG+R S + + R Sbjct: 56 EALGVRLLGLWEEGFPEGLKALPQPPTHLYLKGELPP-EREAVALVGTRRASPWALAFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L+ G+ + SGLARGID AH AL+ G ++ VLG+ L+ ++P + LA + Sbjct: 115 KLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDRVYPPENRPLAQRMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFP P FPRRNR+I+GL + V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + S G + LI+ GA V E++L L S ++ Sbjct: 230 LAVPGRPMDERSLGANRLIQDGAYPVLSAEDVLSYLG-----------MSARPKPLPGLS 278 Query: 308 LPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L A + + + + +A G P V++ L LEL G A+PGG Sbjct: 279 PEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELKGLARALPGGRY 331 >UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mulieris RepID=C2KRF3_9ACTO Length = 462 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 97/433 (22%), Positives = 163/433 (37%), Gaps = 77/433 (17%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----------------TGLTLR 47 W L + + ++ ++ + Sbjct: 34 RAAWTALAD---PGDVTAGNLVEFFGALEALERLMRLATHEVEPDEDAIRDTFKPFVLPA 90 Query: 48 QAQRFLSFPRKS----IESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGEL 102 + + + ++ L WL + + + +P L + P AL+V G+ Sbjct: 91 SVAKIAGWALRWRVVSVDQELEWLWENDGSFLIPGDPQWPRTLDTMGANRPLALWVRGDP 150 Query: 103 HALHSF---QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 A+ +A+VGSR+ + YG LA GV + SG A GID H+ AL Sbjct: 151 AAVQDTETGAVALVGSRSATRYGMSMAGELGYDLAQHGVWVISGGAYGIDAAGHRGALGS 210 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 +G ++ V GL ++P + + +LE GA++SE P P + F RNR+IS LS Sbjct: 211 SGKTLCVQAGGLRELYPAMNTSMFDQILET-GAIISEQPWSYRPQRHLFLSRNRLISALS 269 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 + V+VVEA RSG++ TA EQGR V A+PG + + S G H LI++GA LVT ++ Sbjct: 270 QVVVVVEAGTRSGAMSTANHGAEQGRTVAAVPGLVTSGASAGCHQLIREGATLVTCAGDV 329 Query: 280 LENLQFGLHWL------------------------------------------------P 291 LE +Q + Sbjct: 330 LELMQPFVAPDEKPIGACSTAGSLGEGAGHSAENVTLSTAAAKESSEAGHSAPAAGSNAN 389 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVT-PVDVVAERAGQPVPEVVTQLLELELAGW 350 + + S S + ++ + + + +A++AG + + +L L L G Sbjct: 390 PSTKLSADSLFSPFLKPETIKVFDALPKRMWGSPENIAQKAGLGISATLGELGLLVLDGK 449 Query: 351 IAAVPGGYVRLRR 363 G Y R + Sbjct: 450 AETRDGKYRRPQP 462 >UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacterineae RepID=D0LAN6_GORB4 Length = 374 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 95/377 (25%), Positives = 158/377 (41%), Gaps = 23/377 (6%) Query: 1 MVD---TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS--F 55 M D W L ++ ++ + + AV ++ R+ + Sbjct: 1 MSDDAARRAWAYLARVAEPPAAPVIDMIAALGVSEAAAAVRRRKVPDEHREVLAITASRA 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPP-QLLATTDY--------PGALFVEG--ELHA 104 ++ L E+ L+ + +P L+A P AL+V G L Sbjct: 61 DTDQAQADLDTAERIGARLVTPADDEWPAWSLMALGQADTAARGGVPLALWVRGPARLDD 120 Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + +A+VGSRA S YGE L G + SG A GIDG AH+AAL G + Sbjct: 121 IAAACVALVGSRAASSYGEHVTATVASGLCDNGFAVLSGGAFGIDGAAHRAALGSGGTTA 180 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AV+ G++ +P HA+L + + GA++SE+P + F RNR+++ L +V Sbjct: 181 AVMACGIDRDYPAAHAQLLREI-ARVGAVISEYPPGTTAAKHRFLTRNRLVAALGGATVV 239 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL 283 VEA RSG+ TA A + GR + A+PGP+ + S G H +I A LV + ++ + Sbjct: 240 VEAGRRSGAANTAAWARKLGRPLGAVPGPVTSVTSVGCHQMIADQLATLVVDAAAVIRLV 299 Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQL 342 + + + ++ + + + +A AG +P V T L Sbjct: 300 RPDGEGVMT----GGRARATDALSAEQKRVHDALPARGAVTIGEIAFSAGLELPAVRTAL 355 Query: 343 LELELAGWIAAVPGGYV 359 LE+ G I + Sbjct: 356 ARLEVTGLIDGDGARWW 372 >UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B990 Length = 252 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 18/258 (6%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 + + I + ++ + + + S S+ YP Sbjct: 13 LKYKGQFDLIYKALERKERVDESLKEELFKTIKSS--------------YTTIISDDYPQ 58 Query: 85 QLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 QL P L+ G L L +AV+G R S YG + R+ + L + I SG+ Sbjct: 59 QLKYINCPPFVLYYYGSLSLLDKDCIAVIGKRDCSEYGVQATRVLVKELVKNDIVIVSGM 118 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 A+GIDGV+H+ A++ G ++AVLG+G++ +P + L + + ++SE+P PP Sbjct: 119 AKGIDGVSHRTAIRSKGHTVAVLGSGIDYPYPPMNEDLYY--VLKNELVLSEYPGSTPPR 176 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 +FP+RNRII+GLS+ +LV EA L+SG+++T ALEQG++VFA+PG + + S+G + Sbjct: 177 KDHFPKRNRIIAGLSQKLLVTEADLKSGTMITVGFALEQGKDVFAVPGRVYD--SKGCNA 234 Query: 265 LIKQGAILVTEPEEILEN 282 LI+QGA LV E+ILE Sbjct: 235 LIQQGAKLVMNVEDILEE 252 >UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB3 Length = 366 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 104/358 (29%), Positives = 146/358 (40%), Gaps = 25/358 (6%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQTGL----TLRQAQRFLSFPRKSIESSL---------C 65 IA A + R+ I Sbjct: 13 RRAWLIARLSGHIERAWAARRPLPAVLSLADDELIAALAGEQRRRIAREYDRFDAALARE 72 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVVGSRAHSWY 121 I + YP +L D P L + G +A+VG+R + Y Sbjct: 73 RCVDCGLTAICRCAPHYPQRLRDLPDAPAVLHLLGRADRFEQLIEADGVAIVGARRATPY 132 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R LA G+T+ SG+A GID AH AL+ +G ++AVL G +P R Sbjct: 133 GIEQARGIARGLAAAGITVVSGMALGIDAAAHTGALEASGSTLAVLAGGAERAYPASKRR 192 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +VSE P P + FP RNR I+ L++ +VVEA RSGSL+TA AL Sbjct: 193 LHERIAAS-GVVVSEMPPGTPIRRWAFPARNRTIAALARLTVVVEAGERSGSLITATLAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + P + G + LI +GA L+ P+++LE L P P N+ S Sbjct: 252 DLGRDVAAVPGLVTAPLAAGTNGLIAEGARLIRGPQDVLELL--FGADAPRVPGNAVAS- 308 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + LL VG V + G PV + L +LEL G + GG Sbjct: 309 ---GLPADLRALLERVGSGQDTVAALTAD-GLPVDAALAGLAQLELRGKVRRTTGGRY 362 >UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=B1C1T5_9FIRM Length = 251 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 137/252 (54%), Gaps = 3/252 (1%) Query: 31 QSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT 90 + I L+ G + Q + + ++ S+ YP L Sbjct: 3 EEIILYFALKYAGDFDKIYQALERKEKIDDDLKGHLFKELKSKYTTIISDDYPAALKEIN 62 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P LF G+L+ +++ + V+G R S YG + L TI SG+A GID Sbjct: 63 CPPFVLFYYGDLNLVNTKCIGVIGMRQPSDYGIEVTKTIVSKLVLENYTIVSGMALGIDA 122 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 +AH++A+ V G +IAVLG+G++ +P ++ + +++ ++SE+P ++ P NFPR Sbjct: 123 MAHQSAMNVLGKTIAVLGSGIDNCYPLKNKTIYE-IMKVNQLVISEYPGNLVPKKINFPR 181 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGA 270 RNRIISGLS+ +LV EA RSG+++T ALEQG++++ +P I + S G + LI+QGA Sbjct: 182 RNRIISGLSESILVTEANERSGTMITVGHALEQGKDIYCIPSRIND--SSGCNRLIQQGA 239 Query: 271 ILVTEPEEILEN 282 LV + +I+++ Sbjct: 240 KLVMDISDIVDD 251 >UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKG0_9ACTN Length = 299 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 10/295 (3%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++ ++YP L P L+ G+ L + L+V+G+R + YG + Sbjct: 5 WILTRGDDYYPKCLEDLHSPPRVLYGIGDPTLLSAPMLSVIGARRATPYGIAIAEMTARV 64 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 GVT+ SG A G D A +AL G +I VLG G + I+PR L + EQ G Sbjct: 65 AVDCGVTVVSGGAMGCDFAAGMSALSAGGKTIVVLGCGADVIYPRSSEPLILAAQEQ-GV 123 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++S P PP + FPRRN II+ L ++V EA +RSG++ TA A++ GR ++A+PG Sbjct: 124 VLSLDPWKTPPRRFAFPRRNAIIAALGSVLVVTEAGIRSGTMTTAEAAIDLGRALYAIPG 183 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + LI +GA ++++ + +L + A + D P Sbjct: 184 SIFSPTSAGTNRLISEGARIISDESSLAVSLALDFGTVARAQK---------DQTSPKSR 234 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHV 367 +++ + + + +A R G+ V ++ L + E +G I +P G R H+ Sbjct: 235 IISALLASPSRPEELAMRLGEDVLTLMRTLTDFEASGIIQRLPDGRYTPTREYHL 289 >UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ANQ5_TSUPA Length = 373 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 113/370 (30%), Positives = 164/370 (44%), Gaps = 27/370 (7%) Query: 21 MVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 ++ + V + +AV ++ G R E+ L +E L+ D Sbjct: 9 LIALIDAVGPDAAAEAVRRREFPAGFEDVAEATAARADRDRAEADLDHIEHLGGRLLTPD 68 Query: 79 SEFYPP-QLLATTDYP----------------GALFVEG--ELHALHSFQLAVVGSRAHS 119 +P +L P AL++ G L L +A+VG+RA S Sbjct: 69 DGEWPEYRLAVLAARPRTPAQVHEDQWRELRPIALWMVGGGHLDDLLDRSVAMVGTRAPS 128 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YGER F LA G T+ SG A GIDGVAH+AAL G ++A + GL+ +P H Sbjct: 129 GYGERVADHFAGDLAAEGFTVVSGGAYGIDGVAHRAALAAGGPTVAFVAGGLDRPYPAGH 188 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A L + E GA++SE+P P + F +RNR++ ++ GV+V+EA LRSG+ TA Sbjct: 189 AGLFRRIAE-DGAVISEYPPGTVPAKHRFLQRNRMVGTVTGGVVVIEAGLRSGTRNTATW 247 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A + V A+PGP+ S H LI+ GA LVT P E++E + APE Sbjct: 248 AGHRDVPVCAVPGPVTVATSVTCHQLIRDGARLVTRPAEVIEEVGRIGEL---APEREVP 304 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +A + + PV +A AG P V+ L L+ G + G Sbjct: 305 VHRTDGLAAGELRVYDALPARSGLPVSEIASVAGLPARAVLGHLAMLDARGLVTKD-GAL 363 Query: 359 VRLRRACHVR 368 RLR R Sbjct: 364 WRLRSPTEDR 373 >UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Actinomycetales RepID=Q2J706_FRASC Length = 446 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 150/361 (41%), Gaps = 23/361 (6%) Query: 18 GDDMVR--IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLI 75 + + R +A + AV +++ G + P L + L+ Sbjct: 31 PERLARVALARVFGPEHRRVAVEVRRRGAFEVWNALRAAHPSVDPVRDLDAAWRAGARLV 90 Query: 76 PADSEFYPPQLLATTDY-----------PGALFVEG--ELHALHSFQLAVVGSRAHSWYG 122 +P +L A P AL+V G L L + VVG R + YG Sbjct: 91 CPQDAEWPLELDALDRLRDAGDGSMIGTPLALWVRGPLNLSELPPRAVTVVGCRTATSYG 150 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 +A +G + SG A GID AH+ AL G ++AVL G++ +P H L Sbjct: 151 LHLAGEIAFAMAEQGWAVVSGAAFGIDAAAHRGALAAAGPTVAVLAGGVDVPYPTAHVEL 210 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + + GA+VSE PP F RNRII+ LS+G ++VEA RSG+L T Sbjct: 211 LEEI-ARTGAVVSEVSPGTPPYRRRFLTRNRIIAALSRGTVLVEAGHRSGALNTVAHTRR 269 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ---GAILVTEPEEILENLQFGLHWLPDAPENSFY 299 GR V +PGP+ + S G H L++ +LVT E+I E + + Sbjct: 270 LGRPVMVVPGPVTSAMSAGCHRLLRDFREQTVLVTGAEDIREEIASIGSL---VQRPASG 326 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + ++ ELL + V V+A R G V+ L L + G + V GGY Sbjct: 327 NGPRDGLSEAVRELLDAMPARAAVGVSVLARRTGLRPEAVLAMLGPLAVEGLVENVAGGY 386 Query: 359 V 359 Sbjct: 387 R 387 >UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria RepID=B7ABZ5_THEAQ Length = 410 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 100/333 (30%), Positives = 157/333 (47%), Gaps = 25/333 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + R+ + + +A+ + L R ++ + + L Sbjct: 4 LALAFLPGIGPK---RLLELLGAEDPKEALAERFPQLLERLSEAEARAEAERRRAEELSL 60 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 ++ E +P L P L+++G L +A+VG+R + + + R Sbjct: 61 -----RILGLWEEGFPESLKRLPQPPTHLYLKGTLPE-EGQAVAIVGTRRAAPWALSFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 TLA G + SGLARGID AH AL+ G ++ VLG+ L+ I+P H +A + Sbjct: 115 KLARTLAEAGAVVVSGLARGIDREAHLGALEAGGRTLGVLGSALDQIYPPEHRPMAERMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFPL P +FPRRNR+I+GL++ V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPLGTGPKPEHFPRRNRLIAGLARAVIVVEAPLESGALITARYALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + GS G + LI+ GA V PE+ L L F S + +++ Sbjct: 230 LAVPGRPTDQGSLGANRLIQDGAYPVLAPEDALAYLGF-----------SGRRKEVLELS 278 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + +AE G V++ Sbjct: 279 PEESRLYELLRQGEALPEHLAEALGMSPEGVIS 311 >UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E8F Length = 322 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 8/292 (2%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAH---WVAKQSHIDAVVLQ-QTGLTLRQAQRFLSF 55 M +++ + L + L + + ++++ LQ T + + Sbjct: 1 MEESKRNLILLHHSNELSWKGIGLLLKSDPYLSQLKTYSPEDLQSILQTTPQHIRSIYDH 60 Query: 56 PRKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVV 113 +ES L + + + YP L + P L+ +G ++ LH + LA+V Sbjct: 61 IHHFPLESFLEKYKAYSIQISTLYDSSYPSLLRSCHKAPWVLYGKGNMNLLHTAKSLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG + L + I SGLA GID H+ L G +IAVLGNG+ Sbjct: 121 GSRKGNDYGYEVVNSWVPHLIKQDFVIVSGLASGIDSFVHERTLNYEGSTIAVLGNGILQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P +++ + + E+ G L+SE+P P + FP RNRIISG+++G LVV+A+ RSGS Sbjct: 181 CYPLKNSEIQKRIGEK-GLLLSEYPPFRKPERWQFPERNRIISGITRGTLVVQASKRSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 +TA ALE+GREVFA+PG I +P S G + LI+ GA LV E+I+E ++ Sbjct: 240 FITAERALEEGREVFAVPGNIFSPLSAGTNSLIQLGAKLVLSTEDIIEEIRL 291 >UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiaceae RepID=A4FME1_SACEN Length = 389 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 114/374 (30%), Positives = 173/374 (46%), Gaps = 20/374 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI--E 61 EI L +S++ +A ++A A + ++G + R+ + E Sbjct: 16 DEILLARAYLSAVAEPPAPALAGFIAAHGASRAAEVVRSGSAPPSVADEVDARREHVSGE 75 Query: 62 SSLCWLEQPNHHLIPADSEFYP-PQLLATTDY----------PGALFVEGELHALHSF-- 108 ++L L+ + +P + D P AL+V G++ S Sbjct: 76 AALEAAAMAGLRLVTPEHSGWPHKSFDSLADATAIGLPGMAAPIALWVRGQVAFAESLGT 135 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +A+VG+RA S YGER F LA G T+ SG A GIDG AH+ AL +IA L Sbjct: 136 SVAIVGARAASGYGERVAAEFAHGLAIEGYTVVSGAAYGIDGAAHRGALAAGRPTIAFLA 195 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G + +P H+ L ++ EQ GA+VSE+ P + F RNR+I+ +G +VVEA Sbjct: 196 CGADIDYPSGHSMLLRAIGEQ-GAVVSEYAPGTEPRKHRFLVRNRLIAACGQGTVVVEAG 254 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF-G 286 RSG+ TA A GR V A+PGP+ + S G H +++ G A+LVT + + E L G Sbjct: 255 ARSGASNTANTADALGRPVMAVPGPVTSKSSVGCHEMVRSGKALLVTNVDHVREVLSPLG 314 Query: 287 LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + D P + + VA + L+ T D +A +G P+ +V L LE Sbjct: 315 VGPTTDLPVPAKATDSLDRVAKQLHDALS--DSAATSADELARDSGLPLRKVRALLPALE 372 Query: 347 LAGWIAAVPGGYVR 360 LAG G+ R Sbjct: 373 LAGLAVREERGWSR 386 >UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQY9_OCEIH Length = 294 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 7/283 (2%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPRKSIESSLC 65 L S+ + I Q + L++A+ F S Sbjct: 11 LSRCRSITRSLLRNILQLDPSLKITYQSSANQLSSWLQIPLKKAEYFYSDLHNVALQKQV 70 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGER 124 + + + E+YPP L D P L+ G++ L L+V+G+R + +R Sbjct: 71 IRDMQLYQTVTIVDEYYPPMLNTIKDGPIVLYAIGDIDILKKLPSLSVIGTRKPTAQAQR 130 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L +G I SG+ARGID AH+ L NG +IAVLG G + I+PR H L Sbjct: 131 KMEIILP-LIQQGWIIVSGMARGIDSFAHQMTLHHNGKTIAVLGGGFHHIYPREHLSLFH 189 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + Q G +++E+P D PP+ + FP RNRIISGL+ G LV+EA RSG+L+T AL+QG Sbjct: 190 EIT-QKGLVLTEYPPDQPPIRHQFPERNRIISGLTMGTLVIEAMKRSGTLITVDQALDQG 248 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 REVFA+PG ++G H +I+ GA LV E +I+ + L Sbjct: 249 REVFAVPGNPWVQQTKGCHQMIQDGAKLVQETNDIIIEFEGML 291 >UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE2_9ACTO Length = 386 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 20/380 (5%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAK--QSHIDAVVLQQTGLTLRQAQRF---- 52 M DTE+W +++ + + L L + R Sbjct: 1 MNDTELWEAAWWSAVAEPADPCARILRQALGDRDARAWLIGSWSAPPLALARHSRIDWHT 60 Query: 53 ------LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHAL 105 I+S L + + +P L + P L+ GEL Sbjct: 61 QWNRWRQRALSVDIDSELTRVAHAGGGFMTPGDPRWPEHLACLGEEEPMGLWFLGELVEA 120 Query: 106 HS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L++VG+RA + G R R +A GVT+ SG A GID AH+ AL G + Sbjct: 121 PRVDRHLSIVGARASTGAGNRCARNMAAFVAAAGVTVVSGGAIGIDIEAHRGALSARGRT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I +L G+ +P H ++++ GGAL+SE P + F RNR+I+ S + Sbjct: 181 ICILAGGVCNPYPACHGGDFRAVIDGGGALISEVAPTARPAKWRFLTRNRLIAAWSGATV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA RSG+L TAR A+E GRE+ A+PG + P S G L + GA ++ + + LE + Sbjct: 241 VVEAGARSGALATARRAMEYGRELGAVPGAVDAPMSVGCLELARNGATIIRDGRDALELV 300 Query: 284 QFGLHWLPDAPENSFYSPDQ--QDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVT 340 + D + + + V+ + A EV Sbjct: 301 RPVSVDAAQPLFGMPVDDDHGVDALEPTQRRVWEALPRSAPASVEAICVAAALSREEVNY 360 Query: 341 QLLELELAGWIAAVPGGYVR 360 L+EL +AG +A G+ R Sbjct: 361 ALMELSVAGLVAGSTRGWTR 380 >UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIU8_PEDAC Length = 289 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 4/289 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRK 58 M + +R+ ++ +I V Q + T + Q +++ Sbjct: 1 MELRDFLIRIKIGTTFGIKKQSQIYQTVRDQPELSISEWVHTSPLIADEQRSDLVNYLHS 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRA 117 S + N ++ YP L P LF G L L +A+VG+R Sbjct: 61 SKLKRKIHENEQNGGILTIADPAYPDILREIYCPPTVLFYRGRLDLLQEPRMIAIVGARN 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + L + SGLARG+D + H+A + G +IAV+GNGL+ +P+ Sbjct: 121 MTRYGMATVKKLVPGLLEHQLVTVSGLARGVDAMTHQATVDGAGKTIAVIGNGLDVTYPK 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++A L ++Q G L+SE+ PL ++F RNRII+GL++ ++EA +SGSL+TA Sbjct: 181 QNAVLQDQ-VQQTGLLLSEYAQGARPLRHHFVERNRIIAGLAQATCIIEAKQKSGSLITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 AL + R V A+PG I + S G + LI GA + ++LE + Sbjct: 240 SLALGENRNVLAVPGSIFSENSRGTNELIAAGARPLISLNDVLEEVGLQ 288 >UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyces RepID=D1WZE4_9ACTO Length = 442 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 150/368 (40%), Gaps = 15/368 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQAQRFLSFPRKS 59 + L + + R + + + L A R + ++ Sbjct: 63 ERLARAALTRVLEPGDERAGRWLRRTGPVELMRRLTVDDGSAERLPGMTAARLGGYRLRA 122 Query: 60 IESS----LCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAV 112 + L + + +P QL D P L+V G +L +AV Sbjct: 123 AGAEPGRDLAAVAAVGGRFVCPGDREWPSQLDDLGDARPVGLWVRGRPDLRLWSLRSVAV 182 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+RA + YG LA RG + SG A G+DG AH+ AL G + AVL G++ Sbjct: 183 VGARACTPYGAHMAAALGSGLAERGWVVVSGAAFGVDGAAHRGALGAGGATTAVLACGVD 242 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR HA L L Q G +V+E P P F RNR+I+ L++G +VVEA RSG Sbjct: 243 VAYPRGHAELLGR-LAQQGLIVAELPPSSHPTRSRFVLRNRVIAALTRGTVVVEAEYRSG 301 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SLVTAR A GR +PGP + S G H L++ LVT+ +E++E + P Sbjct: 302 SLVTARQAQRLGRFAMGVPGPATSGLSAGVHELLRGEGSLVTDADEVVELVGDIGDLPPV 361 Query: 293 APENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 V +L + V +A AG E + +L EL G++ Sbjct: 362 RRGPVLPRDHLDAVTA---RVLDALPYHGVAHPRDLARTAGTSADETLGRLYELHSLGFV 418 Query: 352 AAVPGGYV 359 + Sbjct: 419 EREGDDWR 426 >UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG86_CORU7 Length = 416 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 99/405 (24%), Positives = 154/405 (38%), Gaps = 46/405 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIA------HWV-------AKQSHIDAVVLQQTGLTLRQ 48 + W+ L D++ + + + + A+ + Sbjct: 11 QNLLAWIYLRQTIEASNTDILNLLWPEGWENRLEGRDAGKGALPDVRALASRIRHRDPSL 70 Query: 49 AQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLA---------------- 88 R L E+ L LI + +P L Sbjct: 71 PHRILESTAARVDCDPEAELDAATAAGFRLITPLDQEWPETLDHAFARIDDRGSDQNSAV 130 Query: 89 --TTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 P AL++ G L L + VVG+R + YG + LA G +I SG Sbjct: 131 RGLAAAPFALWLRGNGNLRNLSRQSVTVVGTRQPNAYGAQLSTQLSTDLALAGYSIVSGG 190 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 ARG+D AH AAL+ G SIAVL GL+ +PR+H L + E G +VSE+ L P Sbjct: 191 ARGVDRCAHTAALRAGGASIAVLACGLDVDYPRQHVGLFKQIAES-GVVVSEYALGTHPA 249 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 + F RNR+++GLS G +V +AA RSG+L T A + +PGP+ S+G Sbjct: 250 RHRFLTRNRLVAGLSAGTIVTQAANRSGALNTLNWAEVMLNQPMVVPGPVDTALSQGVLH 309 Query: 265 LIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF----YSPDQQDVALPFPELLANVGD 319 ++ G A V + E ++ + PE Q ++L + G Sbjct: 310 RLRDGRAQPVWTAGHVRELVEASSQFNAQVPEQQAMVFGSGTGVQSMSLNQVTVYDAAGL 369 Query: 320 EVTPVD---VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 V + G + V+ L ELE G ++ +VR+ Sbjct: 370 PGGGGPTLRDVQQETGLSIQLVMRTLKELESQGLVSREGERWVRV 414 >UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4B8_GEMAT Length = 348 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 145/355 (40%), Gaps = 22/355 (6%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 L L ++ + + + + A + RQ+ Sbjct: 10 ACLALQTLPKMGDVSVRGLVEAHGSANAALASLPPAVVAAARQSAASSV----------Q 59 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + H++ E YP +L D P LF G + +A+VG+R S YG R Sbjct: 60 LATRTGAHIVALPDEHYPARLRELRDAPAVLFARGSVDIAAPPAVAIVGTRTASGYGLRV 119 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 R A G+++ SGLARGIDG AH+AAL G ++AVLG G++ +P+ H L Sbjct: 120 ARSIATACARAGISVVSGLARGIDGAAHEAALAAGGRTVAVLGTGIDITYPKSHRLLQER 179 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + G ++SE A FPRRNR+I+ L+ +VVEA SG+L+TA A+E GR Sbjct: 180 I-AHEGLVLSEQTPGDAGHAGTFPRRNRLIAALADVTVVVEAGEGSGALITADHAVELGR 238 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 V +P I + G + L+K A + P+++L L + Sbjct: 239 TVACVPNAIDVATARGSNALLKAHAEPILSPDDVLRLLD-----------MTPSPTQGPA 287 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + V VA+ G + L LE+ G + G +R Sbjct: 288 LDGVSARCWHAVQQGALTPVEVAQHTGLSTRDATAVLALLEIDGLLVFDTSGRIR 342 >UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcaceae RepID=C5CAH8_MICLC Length = 424 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 104/385 (27%), Positives = 158/385 (41%), Gaps = 33/385 (8%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSFPRKSI-- 60 L + ++++L + + + + +L L R A + ++ Sbjct: 40 LAVQTVTALGPERALVLLTGREAIQPAERDLLADLAGTPDTLPRRWAAGLARWAPRAARL 99 Query: 61 --ESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALH-SFQLAVVGSR 116 E L L + L+ + + +P L + P L+ G LAVVGSR Sbjct: 100 EPERDLVTLHRLGGGLLIPEDDAWPAALADLGEEAPLGLWFRGTGTLPPADRMLAVVGSR 159 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----------NG--VSI 164 + YG +G + SG A GIDG AH+AALQ G ++ Sbjct: 160 EATAYGRTVTARCAAHAVQQGACVISGGAYGIDGAAHRAALQAPAAPEDAAGRGGVPPTV 219 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVL GL+ +P H L +++ G LVSE P P Y F +RNR+I+ L+ VLV Sbjct: 220 AVLAGGLDRFYPAGHEDLLRAVMAA-GLLVSEMPPGASPTRYRFLQRNRVIAALAGAVLV 278 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL 283 VEA RSG+ TA A GREV +PGP+ +P S G H L+++ A LVT +E L L Sbjct: 279 VEARWRSGAQNTAGHAFGLGREVGVVPGPVTSPSSAGCHRLLQESPARLVTTEQEALALL 338 Query: 284 QFGLHWL-------PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPV 335 + + + + + + P D + AG + Sbjct: 339 GQAPARSGGAGGRASTRAAPEPAARPTDGLTMEEALVHEALPLRQAVPADRITVSAGLAL 398 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 P V+ L L+ AG V + R Sbjct: 399 PTVLACLSRLQRAGLAERVEDRWRR 423 >UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides sp. JS614 RepID=A1SLR3_NOCSJ Length = 378 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 112/379 (29%), Positives = 161/379 (42%), Gaps = 21/379 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAK--QSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 + + LR+ +S+L R+ WV + + + ++L L Q + Sbjct: 5 EEDRLLRVA-LSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAAEDP 63 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATT---------DYPGALFVEG--ELHALHSFQ 109 + +L + E +P QL P L+V G L L Sbjct: 64 QRTLARAADRGLRFVVPGDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAG-S 122 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AVVGSR+ + YG +A + SG A GID AH+ AL G ++AVL Sbjct: 123 VAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGIDQAAHRGALVGGGSTVAVLAC 182 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G + +P H L + GA+VSE P F RNR+I+ LS G +VVEAA Sbjct: 183 GADRCYPAAHRELIEYI-AGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAAA 241 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLH 288 RSG+L TA A R V +PGP+ + SEG H LI+ Q A+LVT ++LE + Sbjct: 242 RSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQ 301 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDV-VAERAGQPVPEVVTQLLELEL 347 L P S D + ++L V + +A AG + E L+ L Sbjct: 302 HLAAEPRGPVRSRD--RLTTRQRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAE 359 Query: 348 AGWIAAVPGGYVRLRRACH 366 G VPGG+ RL H Sbjct: 360 RGLAEQVPGGW-RLAALAH 377 >UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FJ6_PEDPA Length = 286 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 6/287 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR---FLSFPR 57 M + +R+ ++L +I + K + T ++++Q+ + Sbjct: 1 MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQS 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSR 116 + + + EQ ++ E YP L P LF G L L H +A+VG+R Sbjct: 61 EQLTHEIQINEQSG-GILTILDEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGAR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YGE+ + + +T SGLA+G+D + H+A L G +IAV+GNGL+ +P Sbjct: 120 MMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATLANAGSTIAVIGNGLDITYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +++A+L + ++ G ++SE+P PL ++F RNRII+GL+ VVEA SGSL+T Sbjct: 180 KQNAQLQNQI-QKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL + R V A+PG I + S+G + LI GA + E +++LE + Sbjct: 239 ASLALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEV 285 >UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E954_9LACO Length = 294 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 146/297 (49%), Gaps = 6/297 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E ++L + + + IA ++ + I + + + + +K+ Sbjct: 1 MNKREFLIKLS-VMGVPYSIQLSIAEFIERNDRIPSFSETDRFIEGKSFE-LERIFQKAF 58 Query: 61 ESSLCWLEQPNH---HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 S + + N + YP L P L+ +G+ + L VVGSR Sbjct: 59 SSEVERAYRKNVEYAGVATIIDRNYPKALKEIYHPPVVLYFQGDFELANEPALGVVGSRV 118 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 HS Y E +L + +G+ I SGLA+G D + H+ + G +IAV+G GL+ ++PR Sbjct: 119 HSPYAEDSLKLLLPDVINQGIVIVSGLAKGTDSIVHQMTMNYCGKTIAVIGTGLDVVYPR 178 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + + G L++E+PL PL ++FP+RNRII+GL + +LVVEA RSG+L+TA Sbjct: 179 GNVMLQNEVAAK-GLLLTEYPLGSQPLKFHFPQRNRIIAGLVQTILVVEARHRSGTLITA 237 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 AL++ R V A+PG I S+G + LI GA E+I+E L P Sbjct: 238 NVALQENRNVLAIPGKITESLSQGTNELIAAGAKPALCSEDIIEEFSNFLTNHIKLP 294 >UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=Mycobacterium RepID=Y2896_MYCTU Length = 389 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 159/371 (42%), Gaps = 19/371 (5%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W L ++ + + V D V Q G L Sbjct: 8 AWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVG-NELAQHTGARREIDRAADDLE 66 Query: 66 WLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEG--ELHALHSFQLAV 112 L + LI D + +P + P L+ G L + AV Sbjct: 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+RA + YGE LA R V++ SG A GIDG AH+AAL G+++AVL G + Sbjct: 127 VGTRAATAYGEHVAADLAAGLAERDVSVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P H+ L + Q G L +E+P V P + F RNR+++ +++ +VVEA LRSG Sbjct: 187 IPYPAGHSALLHRI-AQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSG 245 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 + TA A GR V A+PGP+ + S G H L++ GA LVT ++I+E + D Sbjct: 246 AANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGD 305 Query: 293 APENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 P ++ ++ + G +D +A +G +V+ L LE+AG Sbjct: 306 EPRPGAA---LDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 Query: 352 AAVPGGYVRLR 362 G + LR Sbjct: 363 ECRDGRWRILR 373 >UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBV0_NAKMY Length = 423 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 96/339 (28%), Positives = 139/339 (41%), Gaps = 34/339 (10%) Query: 58 KSIESSLCWLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEGE-LHAL 105 E+ L + LI + +P + + P AL+V G L L Sbjct: 76 ARAEADLVAAARVGARLIGPPDDQWPGAAVSAFAGAMARGVRGAGPPLALYVRGRPLTGL 135 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV------ 159 + VVGSRA S YG R LA G + SG A GID AH++ALQV Sbjct: 136 PDRAVTVVGSRASSPYGTRVAGEMAYELARAGSVVVSGAAFGIDTAAHRSALQVVRSAPD 195 Query: 160 --NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 V++AVL G++ +P + L L+ + G++VSE+P P + F RNR+I+ Sbjct: 196 EPRSVTVAVLACGIDRAYPEANRDLLD-LIARHGSVVSEYPPGTVPARHRFLVRNRLIAA 254 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEP 276 +VVEA RSG+L TA A + GR V A+PGP+ + S G H L+ A LVT Sbjct: 255 FGAATVVVEAGRRSGTLSTAAAAEQLGRMVMAVPGPVTSAMSVGCHLLLADRFAQLVTGA 314 Query: 277 EEILENLQ-----------FGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPV 324 +++L L A + + T V Sbjct: 315 DDVLTALGRTGRTGRLESRAVPGPHDGAVPGEDPRHPTDGLEPTNARVYDAFPTRGSTSV 374 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + +G P V+ L L+L G + R+R Sbjct: 375 HELVVESGLPAATVMGALAVLQLHGLADQDGPQWRRVRP 413 >UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3C0_JONDD Length = 395 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 34/349 (9%) Query: 46 LRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELH 103 + AQR+ P E L HL+ +P QL + P L+V G+ Sbjct: 39 AKWAQRWNARMPAVDNERDLRAARTLGAHLLTPSHPHWPRQLDDLAETSPWLLWVRGKSS 98 Query: 104 ALH-SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 ++ +++VG+R S YG+ ++T + + SG A GID H+ +L+ N Sbjct: 99 MVNADASVSIVGTRTPSAYGDYVAHAILAGISTSKILVVSGGAYGIDAHVHRGSLEHNLP 158 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 S+AVL G++ ++P+ + +L L++ GALVSE P+ V P F RRNRII+GL Sbjct: 159 SVAVLAGGVDRLYPQGNKKLLQRLIDH-GALVSEMPVGVAPSRVRFLRRNRIIAGLGDVT 217 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 V+EAA RSGSL TA A GR V A+PGP+ + S G H LI +G A L+ P ++ Sbjct: 218 TVIEAAWRSGSLSTAHHAAGLGRAVMAVPGPVTSAQSAGCHRLIAEGYAALLGHPADLEA 277 Query: 282 NLQFGLHWLPDAP----------------------------ENSFYSPDQQDVALPFPEL 313 + + ++ +S + + + Sbjct: 278 IVNHRSSDRRERHADIGSDQRENSHAEPGVQRAGDMTGSHRQDDLFSRESDSLHEGERLV 337 Query: 314 LANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +D + +G EV L LEL + GY R+ Sbjct: 338 YDALSPFRARFIDDLVAASGLSHLEVREILGILELKQLVICEQQGYRRV 386 >UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ48_9RHOB Length = 372 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 5/270 (1%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 M + R+ S + + + P I + L + Sbjct: 1 MRSRRVGISTFYRLLSEHGTASAALVALPEIAAAAGVEGYEVC--PEPVITAELRDARKA 58 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 LI +E YPP L+ D P L+V G+ ALH + VVG+R S G R R Sbjct: 59 GARLICIGTEDYPPGLMDLADPPPMLWVIGQTSALHRPMIGVVGARNASSLGLRMARNLA 118 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ G + SGLARGID AH+A+ + ++AV+ G++ ++P +A LA ++ Sbjct: 119 AALSEAGYVVVSGLARGIDAAAHQASAETG--TVAVMAGGVDALYPPENATLADAIP-GT 175 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA +SE P+ P A +FPRRNRII L++ ++VVEAA +SGSL+TAR AL+QGREV A+ Sbjct: 176 GARLSEMPMGRQPQARHFPRRNRIIPALARALVVVEAAAKSGSLLTARAALDQGREVLAV 235 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 PG + + G + LI+ GAILV +++ Sbjct: 236 PGHPFDARAAGGNMLIRDGAILVRSARDVI 265 >UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBZ5_9ACTN Length = 309 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 129/286 (45%), Gaps = 3/286 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I E YP + D P L+ G+ AL + L+V+GSR S YG L A Sbjct: 11 IRLGEEGYPESVAELPDPPSVLYGRGDPSALSTPALSVIGSRRASPYGIAVAELTGRIAA 70 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GVT+ SG ARG D A +AAL G + VLG G + ++P L ++ G + Sbjct: 71 ESGVTVVSGGARGCDQAAGRAALDAGGRHVVVLGTGADVVYPATSRTLIDRAIDASGCAL 130 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 S P PP + FP+RNR+I+ LS+ LV EA + SG+ TA A GREV A PG I Sbjct: 131 SIEPWGTPPQKWAFPKRNRVIAALSRATLVAEAGMPSGTFSTAETANALGREVLAAPGSI 190 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 +P S G ++LI GA + + E + + L +P + + + Sbjct: 191 FSPESRGSNYLIANGACCIADDESLEVAISRIYGTLRFCR---GGAPGLSGLDGAERKAM 247 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +A +T L LE+AG + + G V Sbjct: 248 DMLVANPLRPEELAAHLRLDAIACLTMLSSLEVAGMVTRLSDGRVS 293 >UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RAN2_GARVA Length = 514 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 98/386 (25%), Positives = 159/386 (41%), Gaps = 44/386 (11%) Query: 10 LMSISSLYGDDMVRIAHWVAKQ--------SHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 L I ++ + ++ K ++ + R L P + E Sbjct: 118 LSFIKK--HKELALLENYFKKGLTAWGYHNNNAPKSLEVLHNSISTWCVRLLHLPTWNSE 175 Query: 62 SSLCWLEQPN-HHLIPADSEFYPPQLLATT-----DYPGALFVEGELHAL--HSFQLAVV 113 S W +I S+++P QL P L+ G L LA+V Sbjct: 176 SLCQWFTCGGKQWIIAPHSKYWPKQLQDLAFQSHFSPPLCLWGVGNPQTLTQCHNPLAIV 235 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIA 165 GSR+ + YG F A++G T+ SG A GID AH AL G +IA Sbjct: 236 GSRSCTDYGRELAYQFAYDCASKGHTVISGGAYGIDAAAHWGALDAQDIDENKPTGKTIA 295 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V GLN + PR + +L ++ +GG +SE D P+ + F RNRII+ L+ ++V Sbjct: 296 VFAGGLNHMGPRCNYQLFEQIIAKGGVCISELCPDTTPVGHRFLLRNRIIAALASKIIVA 355 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ 284 +A L+SG+L TA A + RE++A+PG I P + G + LI AI++ ++I Sbjct: 356 QARLQSGALNTATWATDLNRELYAIPGDINQPNNAGCNKLIHDSQAIILCSTQDIDILFP 415 Query: 285 FGLHWLP-DAPENSFYSPDQQDVALPFPELLANV-----GDEVTPVDVV--AERAGQ--- 333 H+ P+ S D ++ ++ + E+ VD + + Sbjct: 416 QSHHYFAYSQPKPEKLSIDYKNYDNTQKLIIDAITTCKRKHELANVDRIYEIIKTSYKEK 475 Query: 334 ------PVPEVVTQLLELELAGWIAA 353 + E+ ++ LEL G I Sbjct: 476 QLDYIPSIAEISGKIALLELEGIIVQ 501 >UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides sp. JS614 RepID=A1SIY8_NOCSJ Length = 349 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 19/323 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAK---QSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 D + L + + + +++A ++ AQ R Sbjct: 12 DRLARVTLSRTIEPGDVRVTGLVSELGAGKVLGYLEAAGDVESHWGFALAQEL---GRVD 68 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEG--ELHALHSF 108 L I +P QL A + P L+V G +L L Sbjct: 69 PAQVLEQAAARGIRFIVPGDAEWPTQLGALRNAGALHERGGEPVGLWVRGAHDLRQLAGN 128 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +AVVGSRA + YG LAT G T+ SGLA G+D AH+ AL G +IAVL Sbjct: 129 SVAVVGSRAATSYGAEQATELSRDLATMGHTVISGLAYGVDQAAHRGALIAGGPTIAVLP 188 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ +P HA+L ++ E+ G +VSE P P F RNR+++GLS+G +VVEAA Sbjct: 189 GGVDRPYPAAHAQLLEAIAER-GLVVSEAPPGAGPTRTRFLARNRVVAGLSEGTVVVEAA 247 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGL 287 LRSG+L TA R V +PGP+ + S G + L++ G A +VT ++++ +L Sbjct: 248 LRSGALNTAHWTTNLHRPVMGVPGPVSSAASTGVNQLVRLGQASMVTSAQDVITDLTTHA 307 Query: 288 HWLPDAPENSFYSPDQQDVALPF 310 + + + + D+ + P Sbjct: 308 NAAATSADGASGELDESFIPGPV 330 >UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 RepID=B6XX38_9BIFI Length = 455 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 145/379 (38%), Gaps = 34/379 (8%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G + R + P + W Sbjct: 66 AACKTLDAAFINGITRWGRSINSRGMASFH--GAMVSWQHRLTTLPSTDPDELKDWFTVG 123 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYG 122 ++ +P QL P L+ +G AL + VVGSR S YG Sbjct: 124 GTQWIVAPHHPCWPSQLADLTMYTDWAAPLCLWGQGNPQALVSCPEPIGVVGSRGVSEYG 183 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + + A G I SG A G D AH A+Q G ++AV GLN I Sbjct: 184 RQSAHELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGAPLAGRTVAVFAGGLNHI 243 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + RL +++ GAL+SE P A F RNR+I+ LS ++V +A RSG+L Sbjct: 244 GPKSNERLFETIISHSGALISELCPGTAPEARRFLIRNRLIAALSSSLIVAQARARSGAL 303 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E R VFA+PG + P + G + LI++G A ++ +I E P Sbjct: 304 NTAGWANELNRRVFAVPGDVTMPHNTGCNRLIQEGRANIICSLTDIDEFCHASHRPQPIV 363 Query: 294 PENSFYSPDQQDVALPFPE----LLANVG-----DEVTPVD---VVAERAG---QPVPEV 338 + DV + +L + D + P+ + Sbjct: 364 IDGEQTEKPADDVLPESDDTTRIILKAIRKCDAKYGHVSTDGLLAILAETNPEEYPISRI 423 Query: 339 VTQLLELELAGWIAAVPGG 357 V +L LEL G I+ G Sbjct: 424 VLELGVLELNGLISTQHGN 442 >UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomycetales RepID=A6W7V8_KINRD Length = 395 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 112/373 (30%), Positives = 165/373 (44%), Gaps = 23/373 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SI 60 D ++ + V + ++AV L R R+ + R+ Sbjct: 28 DDRLARAAWSRLAEPGDAAAAHLVAEVGAVTALEAV------LAGRGPDRWRTRSREADP 81 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATT---------DYPGALFVEG--ELHALHSFQ 109 L L+ + +P +L P L+V G L + + Sbjct: 82 AGDLAAARAAGGRLVVPGDDEWPGRLEDLDRDAGGERPLGAPFCLWVRGPAHLREVTARS 141 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 A+VG+RA + YG+ LA R + SG A GID AH+AAL V GVS+AVL Sbjct: 142 AALVGARAATAYGQHVTSELAAGLADRRFAVVSGGAFGIDAAAHRAALAVGGVSVAVLAC 201 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G++ +P +A L A L E+ GALVSE P P + F RNR+I+ L+ G +VVEAA Sbjct: 202 GVDRSYPPGNAALLARLAER-GALVSEVPPGSTPTRWRFLERNRLIAALTSGTVVVEAAW 260 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLH 288 RSG+L TA A R V A+PGP+ +P S G H L+++ GA+ VT +E+ E L Sbjct: 261 RSGALSTADRAERLLRPVGAVPGPVTSPASAGCHRLLRERGAVCVTSADEVAELLGELGR 320 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELEL 347 AP S + + + ++ + AG + V + L LEL Sbjct: 321 --EPAPVRSVERRAFDGLDRDELRVAECLPRRGGCDLERLVLDAGLELAVVQSVLGRLEL 378 Query: 348 AGWIAAVPGGYVR 360 +G VPGG+ Sbjct: 379 SGIAVRVPGGWRS 391 >UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propionibacterium acnes RepID=Q6A7T7_PROAC Length = 377 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 102/369 (27%), Positives = 154/369 (41%), Gaps = 27/369 (7%) Query: 17 YGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIP 76 G R+ + +L +G R +R S ++ + E+ + Sbjct: 19 PGVMAKRLVE--MTAEELWQHMLTDSG--ERWHKRAKSL---DVDQLVERSEKAAMRFLI 71 Query: 77 ADSEFYPPQLLATT--------DYPGALFVEG--ELHALHSFQLAVVGSRAHSWYGERWG 126 E +P L + P L+V G L + +A+VG R+ S YG+ Sbjct: 72 PGDEEWPTGLDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVA 131 Query: 127 RLFCETLATRGV------TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 L T+ SG A GID AH+ AL G +++VL GL+T++PR ++ Sbjct: 132 VEMAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLACGLDTLYPRGNS 191 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 + + GALVSE PL P F RNR+I+ L+ G +VVEA RSG++ TA A Sbjct: 192 AVLEQI-AGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWRSGAINTASWA 250 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFY 299 G V A+PGP+ + S G + LI+ G AILV + +++ + S Sbjct: 251 NALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPEPERPAGRSLP 310 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + L E L +D +A AG PV + L LE G A G Sbjct: 311 TDILDAIELAVHEALPA--HGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTW 368 Query: 360 RLRRACHVR 368 + A R Sbjct: 369 SVTLARERR 377 >UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BVH3_9BIFI Length = 456 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 93/369 (25%), Positives = 143/369 (38%), Gaps = 37/369 (10%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFY 82 I W + G + R + P E W ++ ++ Sbjct: 81 ITRWGRTINARGMASFH--GAMVSWQHRLTTLPSTDPEELKTWFTANGTQWIVAPHHPYW 138 Query: 83 PPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 P QL P L+ +G+ AL S + VVGSR S YG + + A Sbjct: 139 PSQLADLTIHTDWAAPLCLWGKGDPQALVSCSEPVGVVGSRGVSEYGRQSAHELAKQAAR 198 Query: 136 RGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTIHPRRHARLAASLL 187 G I SG A G D AH A+Q G ++AV GLN I P+ + RL +++ Sbjct: 199 AGHLIVSGGALGTDAAAHWGAIQAMDEIGTPLAGRTVAVFAGGLNYIGPKSNERLFETII 258 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GAL+SE P A F RNR+I+ LS ++V +A RSG+L TA A E R V Sbjct: 259 NHSGALISELCPGTVPEARRFLIRNRLIAALSSTLIVAQARARSGALNTAGWANELNRRV 318 Query: 248 FALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 FA+PG + P + G + LI++G A ++ +I E ++ P ++ Sbjct: 319 FAVPGDVTMPHNTGCNRLIQEGQASIICSLTDIDEFCHAAHRPQSADAADNDDEPSEEST 378 Query: 307 ALPFPE-------LLANVG-----DEVTPVD---VVAERAG---QPVPEVVTQLLELELA 348 + +L + D + + + + +L +EL Sbjct: 379 DTSLSQPTNATAAILKAIRTCSAKYGHVSTDGLLAILAESNPGEYSISRISMELGLMELN 438 Query: 349 GWIAAVPGG 357 G I G Sbjct: 439 GLICTQHGN 447 >UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillus RepID=C0WTK6_LACBU Length = 292 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 12/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID------AVVLQQTGLTLRQAQRFLS 54 M+ + LR+ + + +I W+ Q +++ + RF S Sbjct: 2 MLLRDFLLRIHLCNGIGIVGKSKIYDWIQSQKSTRFDVPSVDSLIKIANIRGGNVTRFSS 61 Query: 55 ---FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + E ++ + E YP QL P +F G+L+ L+ L Sbjct: 62 TYIQLMNNSERVDQLVDSE--KWLCICDEHYPYQLKEAYTPPLVMFYRGDLNLLNEQMLG 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + Y + + I SGLA+G+D AH+ + +G +IAV+G GL Sbjct: 120 IVGARDATHYSMEILKQLLPGPLLNKLVIVSGLAKGVDTWAHQCTIANHGRTIAVIGTGL 179 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 N +P + +L + E+ L+SE+P +FP RNRII+GL + VLV EA S Sbjct: 180 NIAYPSMNQQLQQQIAEEQ-LLLSEYPNGSRGYKNHFPERNRIIAGLVESVLVTEAKHHS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 GSL+TA AL+ R V A+PG I + S G + LI GA + ++LE Sbjct: 239 GSLITANLALQNNRNVLAVPGRINHYLSAGTNELIAAGAKPILRSNDVLEEY 290 >UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=85 Tax=Streptococcaceae RepID=A4W1C0_STRS2 Length = 318 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 + YP L + P LF +G+L L +LAVVG+R S G + + + L+ Sbjct: 111 SILDDIYPLALKQIYNPPVLLFYQGDLELLEKLKLAVVGTRNASKNGIQSVQKIIKELSN 170 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 R I SGLARGID AH A+L+ G +IAV+G GL+ I+P+ + L + + +++ Sbjct: 171 R-FVIVSGLARGIDTAAHIASLKNGGQTIAVIGTGLDNIYPKENKDLQTYIGKHH-LVLT 228 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E+ PL Y+FP RNRII+GL +G++V EA +RSGSL+T ALE+GREV+A+PG I Sbjct: 229 EYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGREVYAIPGSIM 288 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + S+G H LI++GA VT +I+ QF Sbjct: 289 DGKSDGCHHLIQEGAKCVTSGLDIISEYQF 318 >UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA uptake n=2 Tax=Oenococcus oeni RepID=Q04F43_OENOB Length = 295 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 119/221 (53%), Gaps = 3/221 (1%) Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 N + YP QL P LF EG L+ L+S + +VG+R + YG Sbjct: 75 EYEKYRSLN--FLAICDREYPKQLKEIYQAPIILFYEGSLNLLNSPMITIVGTRTMTNYG 132 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ F + G+ + SGLA+GID AH+ AL+ G +IAV+GNG N +P + + Sbjct: 133 KKILEEFVPKIIDSGIAVVSGLAKGIDAYAHQLALEKQGTAIAVIGNGTNISYPAENQSI 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ G L+SE+ P Y+FP RNRI++GL+ LVVEA RSGSL+TA A + Sbjct: 193 QKRII-SDGLLLSEYFPKSRPKQYHFPARNRILAGLTSATLVVEAKERSGSLITAAYATQ 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + R V A+PG + S G + LI GA V + ++IL + Sbjct: 252 ENRNVLAIPGDLNRNNSNGTNQLIADGAKAVLKIDDILNEI 292 >UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter sp. FB24 RepID=A0JXT1_ARTS2 Length = 394 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 153/340 (45%), Gaps = 11/340 (3%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DY 92 + G++ + P + E L + + +I +P QL Sbjct: 58 AENGTASWPGMSASLRRWAPRIPDLAPERDLATMHRLGGRMIMPSDSLWPGQLADLDLHE 117 Query: 93 PGALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P L+ G H L + +A+VGSR + YG +LA RG TI SG A GID Sbjct: 118 PICLWWRGTEHPLPAAAKSIALVGSRDSTSYGAAVTGDLAYSLAQRGFTIVSGGAYGIDA 177 Query: 151 VAHKAALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 AH+AAL G +IAV+ G++ +P + L + GA+++E P P Y Sbjct: 178 HAHRAALAGAGDAMPTIAVMAGGVDRFYPSGNEELL-RTVANQGAVLAEVPPGSAPTRYR 236 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F +RNR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H LI+ Sbjct: 237 FLQRNRLIAALSSVTVVVEARWRSGALNTAHHAESLGRAVGAVPGSVHSANSAGCHRLIR 296 Query: 268 Q-GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVT-PVD 325 + GA+ VT+ EI E L D E S D + L LL + T V+ Sbjct: 297 EGGAVCVTDAGEIAELASSSGESLAD--EAPAQSADHDGLTLEDLILLDALPLRSTSSVE 354 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + AG V L L L G + GG+ R R+A Sbjct: 355 KLTSVAGLSTDAVRAGLGRLGLLGLAESERGGWKRSRKAG 394 >UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K4_HYDS0 Length = 333 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 85/354 (24%), Positives = 154/354 (43%), Gaps = 30/354 (8%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFL-SFPRKSIESSLCW 66 L SI + + R I + + +F + + +++ Sbjct: 2 LKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIK 61 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L+Q N I +++ YP +L D P +F++G+ L +++VGSR Sbjct: 62 LKQLNIEAITYENKLYPANMLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMT 121 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + L T+ SG A GID AH++AL+ + +IAVLG G ++ ++ L + Sbjct: 122 KSVVSELRQ---TVVSGGADGIDSKAHQSALEESVPTIAVLGFGF--LYAKQ--SLFGKI 174 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 L++ G L++EF P Y FP RNRII+ L +LV++A+ +SG+L++A A + ++ Sbjct: 175 LDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKK 234 Query: 247 VFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 VFA G EG L+++ A L T + ++L + Sbjct: 235 VFAYVGNP-VEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNP--------- 284 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +L+ + D+ D + + ++ +L LE+ G+I+ G Y Sbjct: 285 -------ILSFL-DKPCTFDELLVKTNYDEEKLTMELTMLEIEGYISKD-GAYF 329 >UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS Length = 302 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 4/282 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFPRKSIESS 63 L L L G + +R++ V + A + +R A LS + Sbjct: 15 LALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHG 74 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ D + +P L +D P LF G L + +VG+R + G Sbjct: 75 IQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGV 134 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R F + A G+ I SGLARGIDG HK AL G ++AVL G++ ++PR ++ LA Sbjct: 135 RNSLAFSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLACGVDQLYPRSNSALA 194 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 A ++E GG ++SE+ + Y FP RNR+ISGL++ ++V+EA +SG+L+TA CALEQ Sbjct: 195 ARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPKKSGALITALCALEQ 254 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 GR+V+ + + +EG L +GA +T +++ ++ ++ Sbjct: 255 GRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEY 296 >UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510417 Length = 404 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 106/314 (33%), Positives = 154/314 (49%), Gaps = 12/314 (3%) Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELHALHSFQLAVVGSRAH 118 L + + L+ + +P L P L+V G L+ +A+VG+RA Sbjct: 91 RDLEAVHRLGGRLVIPSDDEWPTALTDLGPAAPLGLWVRGAARLNTALRSAVAIVGARAS 150 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG + LA RG+TI SG A GID AH+AA+ G +IA + G++ +P Sbjct: 151 SNYGTKCASDLAWDLAARGLTIVSGGAFGIDAAAHRAAIAREGTTIAFMAGGVDRFYPVA 210 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L +LE GA+VSE + P+ + F RNR+I+ S+ ++VEA RSG+L TAR Sbjct: 211 NTELFQQVLE-DGAIVSETAPGMTPMRHRFLLRNRLIAASSQVTVIVEAGWRSGALNTAR 269 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ------FGLHWLP 291 ALE REV A PG + + S G H LI+ A LVT +++E + F L Sbjct: 270 HALELSREVAAFPGSVYSASSTGTHRLIRAHEAELVTSCTDVIELIGGEEPTLFDDGRLT 329 Query: 292 DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 ++ S D+A + + + V VA RAG V ++ L LELAG Sbjct: 330 SEHPSTAASDPVDDLAEREKICVNVLSVTKALDVSTVASRAGLTVSNTLSALAVLELAGL 389 Query: 351 IAAVPGGYVRLRRA 364 A G+V+LR A Sbjct: 390 SARRESGWVKLRPA 403 >UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter sp. AK-1 RepID=A6YFL4_9MICC Length = 399 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 90/286 (31%), Positives = 129/286 (45%), Gaps = 10/286 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLT-LRQAQRFLSFPRKSIESSLC 65 + ++ R+A V ++ R A R + E+ L Sbjct: 113 LVARALVARHGAHAAYRMALGARPVFPFWDVTAEELADGLDRWAPRPRELDTHAAEADLA 172 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH---ALHSFQLAVVGSRAHSWYG 122 +E+ + E +P L D P L+ G++ S A+ GSR + YG Sbjct: 173 AIERLGGGFLVPGDEHWPTGLDDLPDAPYGLWYRGDIGNGIPAPSRCAALTGSRDSTSYG 232 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----NGVSIAVLGNGLNTIHPRR 178 LA RG+ + SGLA GID AH+AAL +IAVL GL+ +P Sbjct: 233 AAVTGDIAYGLAQRGICVISGLAYGIDAHAHRAALAGSQGDGPATIAVLAGGLDRDYPSG 292 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 +A LAA++ G +SE P P F +RNRI++ L+ VVEA RSG+L TA Sbjct: 293 NADLAAAIRA-NGLTLSELPPGTAPSRARFLQRNRIVAALAGVTCVVEARWRSGALNTAH 351 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL 283 A R V A+PG + + S G H L+K+G A LVT+ E+ E L Sbjct: 352 HAETIARHVAAVPGSVHSANSAGCHRLLKEGIAALVTDAAELTELL 397 >UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcineae RepID=B8HA87_ARTCA Length = 402 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 98/313 (31%), Positives = 144/313 (46%), Gaps = 13/313 (4%) Query: 36 AVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPG 94 + +L++ Q P + E L + + LI E +P QL P Sbjct: 70 SANWSGLAASLKRWQP--RIPDLAPERDLATMARLGGRLIVPSDELWPGQLSDLGIQEPI 127 Query: 95 ALFVEGELHALH--SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 L+ G L +A+VGSR + YG +LA RG+T+ SG A GID A Sbjct: 128 CLWWRGHEQPLPALECSIALVGSRDSTSYGASVTGDLAYSLAQRGMTVVSGGAYGIDAHA 187 Query: 153 HKAALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 H+AAL +IAV+ G++ +P + L ++ Q GA+++E P P Y F Sbjct: 188 HRAALAGGSGAVPTIAVMAGGVDRFYPSGNEDLLRAVCNQ-GAVLAEVPPGSAPTRYRFL 246 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ- 268 +RNR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H L++ Sbjct: 247 QRNRLIAALSAVTVVVEARWRSGALNTAHHAETLGRAVGAVPGSVHSANSAGCHRLLRDG 306 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVV 327 GA+ VT+ E+ E LPD + + Q + L LL + T V+ + Sbjct: 307 GAVCVTDAAEVAELAAPSGTALPDLRQGAAQV--QDGLTLEDLILLDALPLRSTTSVEKL 364 Query: 328 AERAGQPVPEVVT 340 A AG V Sbjct: 365 AAVAGLGQDSVRA 377 >UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKL0_ACIFE Length = 370 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 163/347 (46%), Gaps = 12/347 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-----IESSLCWLEQPNHHLIPAD 78 + ++ R S E W + +I Sbjct: 24 LREAFGSLEKAWKAGIKDLRAAGLLTPALEKVWRDSRKPALPEKIWDWCQVHGARIISRW 83 Query: 79 SEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGV 138 S YPP + P L+V+G L + LA+VGSR + YG F A V Sbjct: 84 SPDYPPLVDQLGAPPPVLYVKGRLPEQPA-CLAIVGSRKATDYGLAVAARFARAAALEKV 142 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 + SG A GID AH+AAL+ G+++AVLG GL ++PRRH RL + EQ GALV+E Sbjct: 143 PVISGGAYGIDAAAHRAALEAGGLTVAVLGGGLGELYPRRHLRLFDKICEQ-GALVTEQS 201 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 PPL NFP RNRII GLS+ VLVVEAA+RSG++ TA A ++ R+++A+PGPI + Sbjct: 202 PWTPPLPQNFPLRNRIIVGLSRSVLVVEAAIRSGAMSTAHAAADENRDLYAVPGPIDSET 261 Query: 259 SEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV- 317 S+G HWL+KQGA L +P E+L++L P +V+ E + Sbjct: 262 SQGTHWLLKQGARLGDDPRELLDSLLGREPGTCTGPAEEEEPDLFGEVSPEEQERAGALY 321 Query: 318 ----GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ +A P+ + T LLELEL G I Sbjct: 322 RWIKKHRAQSLEDLAGAFPWPLAVLSTLLLELELGGRIRRNSRNRYS 368 >UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomycetales RepID=A8M692_SALAI Length = 452 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 101/383 (26%), Positives = 157/383 (40%), Gaps = 31/383 (8%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLS-F 55 D + L ++ + + + +L+ G L A R + Sbjct: 37 TDRLARVALTWLTEPGNRSVFELVESHGAVDTL--ALLRDGGAPGETLRETVAARLSAGN 94 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYP---PQLLAT------------TDYPGALFVEG 100 P ++ ++ L+ + +P L T P +V G Sbjct: 95 PLAVAAQAMERADRLGARLVTPADDEWPLPVADLRRLVLTGSTRRVDRETAPPLCFWVRG 154 Query: 101 ELHALH--SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 +A+VG+RA + YG LA RG T+ SG A GID AH+ AL Sbjct: 155 GQPLAETLDRSVAMVGARAATEYGVHTSTELAYGLAERGWTVVSGGAFGIDAAAHRGALT 214 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 G++++VL GL+ +P +A L + + G LVSE+ PL F RNR+I+ Sbjct: 215 AGGLTVSVLACGLDRPYPMGNAALFDRIADT-GLLVSEWMPGADPLRPRFLIRNRVIAAA 273 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ--GAILVTEP 276 ++G ++VEAA RSG+ T AL R V +PGP+ + S G H L++Q A LV Sbjct: 274 TRGSVLVEAAARSGATQTMHRALAIARPVMVVPGPVTSVMSIGSHELLRQYPEARLVAST 333 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPV 335 +LE + L AP + + + +L + V VD VA R+G V Sbjct: 334 AHVLEEVGRIGVDL--APLVRGPTRVRDQLDDESATVLEALPRRGVRGVDDVAARSGVAV 391 Query: 336 PEVVTQLLELELAGWIAAVPGGY 358 + +L LE G + GY Sbjct: 392 RTALRKLALLEELGLVIQRDDGY 414 >UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y5_9CLOT Length = 329 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 9/293 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW-----VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M + E+ + L I L + +I + ID + + + L + Sbjct: 7 MNNAELIITLTLIKGLGRKTINKIIRQGVLNSLETIETIDYLNNINLKIKGIITKDELKY 66 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + ++ ++ + + E +P +L D P ++ +G+ + L+ +A++GS Sbjct: 67 ANEVAKRTIEICDREDIKISTLLDEDFPQKLKNIDDNPVIIYSKGDYNNLNDKGVAIIGS 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S +G L+ + TI SGLA G D AH +L G +IAV+ GL+ ++ Sbjct: 127 RNPSLHGVNVSYKISSILSQKNYTIVSGLANGCDTFAHLGSLDTYGKTIAVMPCGLDMVY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L ++ G ++SE+P Y R+R+ S LS+G++V+E GSL Sbjct: 187 PNNNCDLFKRIINNNGCVISEYPPSQAVSKYRLIERDRLQSALSEGIIVIETTENGGSLH 246 Query: 236 TARCALEQGREVFALPGP---IGNPGSEGPHWLIK-QGAILVTEPEEILENLQ 284 T A +Q + V +G L++ I + + + + E L+ Sbjct: 247 TVNYAFDQNKIVSCYKHNKNYSNLKTVKGNIKLLQNDEVIPIYDTKSLNEFLK 299 >UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMF6_9CELL Length = 402 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 96/310 (30%), Positives = 140/310 (45%), Gaps = 7/310 (2%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-P 93 D + ++ GL + + +P E ++ L+ +P L P Sbjct: 73 DDALRRRVGLGVARWAA--RWPALDPERDRAAAQRCGARLVVPGDPAWPRGLDDLGVLTP 130 Query: 94 GALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 AL+V G LAVVG+RA + YGER LA RG + SG A GID AH Sbjct: 131 FALWVRGAPPVA-DRTLAVVGARASTTYGERVTVDLAVELARRGWAVVSGGAYGIDAAAH 189 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + AL GV+ VL G++ +P +ARL ++ GG+L SE P P F +RNR Sbjct: 190 RGALLGGGVTHVVLAGGVDRAYPAGNARLLEEVVRAGGSLFSEVPPGATPSRARFLQRNR 249 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AIL 272 +I+ ++ +VVEAA RSG+ TA A R V A+PGP+ + S G H L++ G A+ Sbjct: 250 LIAASAQATVVVEAAWRSGAASTAHHAARLLRPVGAVPGPVTSAASAGCHRLLRDGVAVC 309 Query: 273 VTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERA 331 +T+ E +E L P+ P + + + V VVA RA Sbjct: 310 ITDAAEAIELAGDVGPDLAPTPDAGVTRPT-DGLDPLARLVHDGLARRTARDVTVVAARA 368 Query: 332 GQPVPEVVTQ 341 G V + Sbjct: 369 GTTVAQARAM 378 >UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteriaceae RepID=C7MNC4_CRYCD Length = 328 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 91/256 (35%), Positives = 124/256 (48%), Gaps = 3/256 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + S YP L P L+ G L +L LA++G+R + YG F A Sbjct: 33 VSIGSSTYPKALTCINKPPHTLYGIGSLESLEE-GLAIIGARRATPYGLSCAERFARHAA 91 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 RG+ I SG ARG D AH+AAL+ G ++A LG G + +P H L ++ GGA+V Sbjct: 92 QRGICIISGGARGCDARAHRAALEAGGRTVAFLGGGCDQPYPPSHVPLFQEIINNGGAIV 151 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE D P L Y F RNR+I+GL+K L+VEA + SG+ TA ALE REV A+PG I Sbjct: 152 SENEWDFPALPYTFRARNRLIAGLAKATLIVEAGIPSGTFSTADEALEANREVLAVPGAI 211 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA--PENSFYSPDQQDVALPFPE 312 +P S G + LI QGA + + E L L + + + Sbjct: 212 TSPTSAGANRLIYQGATPIVDDETFDTALSSLFCLLKQECIHMDDDSKSLELPLDAVTQA 271 Query: 313 LLANVGDEVTPVDVVA 328 LLA + E D + Sbjct: 272 LLAALRAEPLRTDTLI 287 >UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CWR3_GARVA Length = 504 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 34/349 (9%) Query: 47 RQAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFYPPQLLATTD-----YPGALFVEG 100 + R P W +I +S+++P QL P L+ G Sbjct: 156 KWCLRLKQLPSWDSNQLKRWFSSNGTQWIISPNSKYWPKQLQDLATQCQVAPPLCLWGIG 215 Query: 101 ELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + +AL + LA+VGSR + YG F ++ A +G T+ SG A GID AH L Sbjct: 216 DPNALIQCNQPLAIVGSRGCNDYGYELSFTFAKSCAKKGHTVISGGAYGIDAAAHWGTLD 275 Query: 159 V----------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 G +I V GLN + P +A+L ++L GGA +SE D P+A F Sbjct: 276 ALDSHVANVNPVGKTIVVFAGGLNKMGPSSNAQLFDAILSSGGACISELCPDTTPVARRF 335 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 RNR+I+ ++ V+V +A LRSG+L TA A RE++++PG + +P + G + LI Sbjct: 336 LLRNRLIAAIASKVIVSQARLRSGALNTANWANSLNREIYSVPGDVTSPSNAGCNMLIHD 395 Query: 269 G-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD-----EVT 322 G A+++ +I H+LP + N+ PD +L + + Sbjct: 396 GKAMMICSQNDIDSIYPNSHHYLPHSLSNNNIIPD--TCNDFQKIVLKAIQECKSKKICA 453 Query: 323 PVD---VVAERAG----QPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 +D + + ++ ++ LEL G + G L R Sbjct: 454 NIDNIHAIMLHTNSNNDFSISKISGEIAILELNGIVKNQNG-VFSLNRK 501 >UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W189_9ACTO Length = 402 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 98/333 (29%), Positives = 144/333 (43%), Gaps = 19/333 (5%) Query: 47 RQAQRFL-SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHA 104 + QR+L +IE +L++ L+ +P QL P AL++ G Sbjct: 69 QAIQRWLPRVAEANIEQQFEYLQRLGGRLMYPQHPDWPGQLNDLGEYAPLALWMRGNFEL 128 Query: 105 LHSFQL-AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL------ 157 + ++VG+RA + G++ L G + SG A GID AH+ AL Sbjct: 129 AQPREWVSLVGARASTNLGDQLAAELSFDLVNAGFGVVSGGAFGIDTAAHRGALTVASQV 188 Query: 158 -QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 +IA + G+ ++P L LL+ G +VSE P P + F RNR+I+ Sbjct: 189 SSEALATIAFMAGGVGQLYPASQLDLFNRLLD-VGLVVSEVPPSWRPARWRFLSRNRLIA 247 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTE 275 S +VVEA +RSG+L TA ALE GR V A+PGP+ + S G H LI++ G LVT Sbjct: 248 AFSAATVVVEAGVRSGALATAHRALELGRPVGAVPGPVTSQMSFGCHQLIRECGVTLVTN 307 Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQ-----QDVALPFPEL--LANVGDEVTPVDVVA 328 +++ E L S + D P E LA VA Sbjct: 308 AQQVGELFLGLGAGLTGGALASEGVQSELVFVSDDFNNPVHERVWLALPKYGEATFVSVA 367 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + AG V EV + L +AG + R+ Sbjct: 368 KVAGLSVSEVSAAVSALLVAGKVEVFGDKCRRI 400 >UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pestis Angola RepID=A9R928_YERPG Length = 247 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 115/238 (48%), Positives = 146/238 (61%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M+ E+WLR+ + L +A + I L GL +Q +F + I Sbjct: 1 MLAAELWLRMTQVKGLGVVKRSALAKRLLASGDIHPGRLAAYGLDSQQCHQFAQLSPRYI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +L WL PNHHL+ YPP+L+ P LFV GEL L+ Q+A+VGSR S Sbjct: 61 ADTLEWLSDPNHHLLTYGEPGYPPRLVHIAGAPLVLFVSGELDVLYRPQIAMVGSRHFSH 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA G+ ITSGLA GIDG+ H+AAL + G +IAVLG+GL I+P+RH+ Sbjct: 121 YGEQWGRYFASELARTGLVITSGLAVGIDGICHQAALNIQGRTIAVLGSGLENIYPQRHS 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 RLA + QGGALVSEF P+A +FPRRNRIISGLS VLVVEA L+SGSL+ R Sbjct: 181 RLAKEIEYQGGALVSEFLTTALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLIVPR 238 >UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N591_SLAHD Length = 319 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 16/303 (5%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + E +P L + P L+V G+ AL LAVVG+R + YG+ LF A Sbjct: 18 LSLGEEGFPAALQSIPHPPKELYVVGDPGALRE-GLAVVGARKATPYGKNAASLFAGMAA 76 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV + SG A+G D AH+AAL+ G ++ LG G + +P + L +++ GGA+V Sbjct: 77 RHGVVVVSGGAKGCDAAAHRAALEAGGTTVCFLGGGCDMPYPVENFDLFQQVVDAGGAVV 136 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P P Y F RNR+I+GL+K L+VEA L SG+ TA AL ++V +PG I Sbjct: 137 SEHPWTFHPKPYTFRTRNRLIAGLAKATLIVEAGLPSGTFSTADEALSANKDVLVVPGSI 196 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEI-----------LENLQFGLHWLPDAPENSFYSPDQ 303 + S+G + L+ QGA V + E L ++ H ++ S Sbjct: 197 FSATSKGANRLLHQGATPVVDEETFDMLLQSLFPHYLPDVGQQAHLPLFGNVSAASSVAT 256 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERA----GQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + E+ ++ +D + E+ GQ +V + ELE G + P G Sbjct: 257 RKLEGLSLEVFRSLEANPMRMDEIIEKCSEGVGQGPQGIVKAIAELEARGVVERYPDGRF 316 Query: 360 RLR 362 R Sbjct: 317 GPR 319 >UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID=Q6GHI6_STAAR Length = 290 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 135/272 (49%), Gaps = 14/272 (5%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 I + WV ++ ++ + R+ F+ I L L+ Sbjct: 30 IKEGGRKKDSYLCEWVNREENVHLL---------RKYYAFIKLDHNDIIKELQKLK---V 77 Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCE 131 I YP L +P LF G + +++ LAVVG+R + Y ++ Sbjct: 78 SYITYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLS 137 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 ++ +TI SGLA+G D +AH+ AL+ N +IAVL G T +P+ L + E+ G Sbjct: 138 NDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTHYPKSTLALRNKI-EEIG 196 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 ++SE+P P Y FP RNRIISGLSKGVL+ EA +SGS +T ALEQ R V+ LP Sbjct: 197 LVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHITIDFALEQNRNVYVLP 256 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G + NP ++G I++GA +V +I E+ Sbjct: 257 GSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URR9_9AQUI Length = 336 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 142/285 (49%), Gaps = 11/285 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS--FP 56 M E+WLRL + + R+ +I + + + +A+ LS F Sbjct: 1 MGSFELWLRLKLTKGVGEITLYRLYKTFGGAENILSADYKDLKGCVGESRARAILSGDFD 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 K E L +E + ++I + E YP L D P +F+ G L L + +VG+R Sbjct: 61 EKVYEEVLRAVESGSIYVITLEDEEYPSALKRIKDPPPLVFLRGSLRKL--PLVGIVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y + +RG + SG A G+D AH +A++ +G ++ +LG G+ Sbjct: 119 KPTPYTLNFVEELVSMAVSRGYGVVSGGAAGVDSKAHLSAVENSGYTLCILGFGIL---- 174 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ S+ E GGAL+SEF + FP+RNR+I+ LS+ ++V EA SGSL+T Sbjct: 175 KARGKVFESISESGGALLSEFLPHERGDRHTFPKRNRLIAALSEFIVVPEAGGSSGSLIT 234 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEIL 280 A A++QG++V+A G + +G + L+++G A L+ + + Sbjct: 235 ADHAVKQGKKVYAHIGIGRSSSWDGCYRLVREGKAELIKDGSHVF 279 >UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ3_ATOPD Length = 291 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 9/285 (3%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I ++ E YP +LL P ++ G+ L S ++V+G+R + YG + A Sbjct: 6 ISSEDEDYPSELLLLNHPPEIIYGMGDRSVLQSPCMSVIGARRATPYGIAIAEMAGRCAA 65 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + + SG A G D A AAL G ++ V G G + +P L + E GA++ Sbjct: 66 DNNIVVVSGGALGCDNAAGMAALNAGGKTVVVAGCGADVTYPTTSLDLFEAAREGKGAVI 125 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 S PP Y FPRRN +I+ L K +LV EA L SG++ TA A G+ ++A+PG I Sbjct: 126 SLDRWGTPPRRYAFPRRNAVIAALGKVLLVTEAGLCSGTMSTAEFANSLGKTIYAIPGSI 185 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 + S G + LI +GA ++ P+E + L + E LL Sbjct: 186 FSLASAGTNRLISEGAQII--PDETSLGIAISLDYDCLVREQMKQDKKLTP-------LL 236 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + + +A R + V V+ L + E G + +P G Sbjct: 237 SALIASPSRPEELAWRLSENVLTVLNSLTDYEARGMVKRLPDGRY 281 >UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma whipplei RepID=Q83MV3_TROWT Length = 399 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 151/373 (40%), Gaps = 33/373 (8%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHI------DAVVLQQTGLTLRQAQRFLSFPRKSIE- 61 IS R+ + + ++ +Q ++ S + + Sbjct: 41 AWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVWKMRADY 100 Query: 62 ----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH---ALHSFQLAVVG 114 S L+ D + P L+V G S ++++VG Sbjct: 101 QQLLKSFQAAHHTGAKLVVTDKYN-----KLQDEKPHILWVRGNSPSILLDTSQKVSIVG 155 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S+YG+ +LA + I SG A GIDG AH +AL +I G++ I Sbjct: 156 TRCCSYYGKSVTADISYSLARKNYVIVSGGALGIDGTAHMSALSAGKSTIVFFAGGVDWI 215 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + L + + E G +VSE P P + F RRNR+I+ + V+V EAA RSGS+ Sbjct: 216 YPRGNEALFSKICES-GIIVSEMPCGSRPTKWRFLRRNRLIAAIPSAVVVTEAAARSGSI 274 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A + V A+PGPI +P SEG + LI+ A VT ++++ + Sbjct: 275 STAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLVVSPIQ- 333 Query: 294 PENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 D + ++ + + + + +G +V + + LEL+G + Sbjct: 334 -------KDSFGLQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLELSGQVI 386 Query: 353 AVPGGYV---RLR 362 G+ RLR Sbjct: 387 RSGSGWRLSGRLR 399 >UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavobacteriaceae RepID=C6WZG8_FLAB3 Length = 342 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 96/340 (28%), Positives = 155/340 (45%), Gaps = 14/340 (4%) Query: 29 AKQSHIDAVVLQ----QTGLTLRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 + + G+ + + + E L + E+ N + P Sbjct: 5 GSAKEVWELSKSGLKNIYGIGKKISFEIGKAEHLLFAEKELSFCEKNNITINLRHLGHLP 64 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 L D P L+ +G L + S +++VG+R + YG+ + F + T + SG Sbjct: 65 THLNECEDAPAVLYQKGNLDSSLS-AVSIVGTRNITTYGKSFISDFLADVKTHKILTVSG 123 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 LA G D H+ ++ N + AVL +G +T++P ++ RLA +LE GG L++EF P Sbjct: 124 LALGADTEVHEVSINNNIPTAAVLAHGFHTMYPSKNRRLADKILEDGGVLLTEFNSSQKP 183 Query: 204 LAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPH 263 NF +RNRII+G+S +VVE A GS+ TA A REVFALPG I + S+G + Sbjct: 184 DRENFIQRNRIIAGISPATIVVETAFGGGSVSTATFANNYNREVFALPGKITDKYSQGCN 243 Query: 264 WLI-KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE--LLANVG-D 319 LI + A ++ + E L + + + LP + LL + + Sbjct: 244 QLIFQNKAAAISTVSGLAEQLGLH----KTEQTGVLFPSSEIRIKLPEQQLILLEALDKN 299 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +D V+ + P ++ LLELEL G+I A+ G Sbjct: 300 TPLSLDDVSLKLDVPAYRILPDLLELELLGYIRALSGRQY 339 >UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ46_9FIRM Length = 500 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 4/283 (1%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES 62 E ++ L+ I + + + + + + + + Sbjct: 2 EYYIYLLQIFGGGNPKIHEVIKAYGNARLAYEHISSGDMSHIPSNRHEYVRRASLERSKV 61 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWY 121 + + N ++ D YP QL + P LF G+++ L +++VG R Sbjct: 62 IMDYCAGNNIGIVTIDDRNYPEQLKNIYNPPVLLFTAGDINCLQGKLAVSIVGPRKPFGN 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R C LA + + SG A GID +AH +++ + ++AVL G+ +P Sbjct: 122 AIRLAENICYNLARSDIVLVSGFALGIDRIAHNNSIRHHKPTVAVLACGITIDYPNNSFG 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++++ GG ++SE D P + F RNRIISGLSKG +V+ SGSL+TA A Sbjct: 182 LRKNIIDNGGLILSELLPDTPCNSDYFKFRNRIISGLSKGTVVIGGYNGSGSLITANHAF 241 Query: 242 EQGREV-FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 EQ REV F +P + ++ GA V + +I+ Sbjct: 242 EQDREVFFTIPDDTLDKKYSRVIRFLRDGAHSVYDFYDIINEF 284 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 10/96 (10%) Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVA 328 A VT+ EE E + + A E+L + + +D + Sbjct: 412 AEPVTDKEE---------KQSGQIAEAAENASGAVGNASGAAEILGIIANSDGVTLDALL 462 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 E+ L +LE++G I+ GG +++ Sbjct: 463 SACSLSFGELSEILADLEISGTISCGAGGIYTVKKE 498 >UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRZ7_9BIFI Length = 481 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 97/351 (27%), Positives = 140/351 (39%), Gaps = 41/351 (11%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLAT-----TDYPGALFVEGE 101 +R +FP ++ + W+ ++ A +P QL P L+ G+ Sbjct: 129 WLRRRAAFPERTAQDWHEWITVSGTAWVVTASDPLWPAQLEDLRLHASWAPPLCLWGRGD 188 Query: 102 LHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + AL LA++GSRA S YG + G + SG A GID AH A+ Sbjct: 189 VRALTACPAPLAIIGSRAVSDYGAHVAQTLAGQAVRAGHAVVSGGAMGIDACAHWGAVDA 248 Query: 160 ------------------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDV 201 G +IAV GLN I P +ARL + GAL+SE P D Sbjct: 249 LAAACDGQASLLDSASMPCGPTIAVFAGGLNHIGPSTNARLFEHIQTWHGALISEMPPDC 308 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 P+A F RNRII+ LS + V +A +RSG+L TA A E RE++A PG I G Sbjct: 309 APVARRFLMRNRIIAALSSVICVAQARVRSGALNTAHWAQELNRELYATPGLITRADHTG 368 Query: 262 PHWLIKQGAILV----TEPEEILENLQFGLHWLPDAPENSFYSP--DQQDVALPFPELLA 315 H LI + A + ++I P + D++ +L Sbjct: 369 CHTLIDEQAARILQSCEHIDDICHERHAPHWPSVAEPTADTTADTMQPADLSDNERIVLD 428 Query: 316 NVG--------DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 V + + E + +P V L LE+ G IA G + Sbjct: 429 AVRQCHRQRVVATASAIGQYCEAS-VAMPVVFAALGALEMRGLIANNNGAF 478 >UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AEB0_LEIXX Length = 411 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 24/368 (6%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFPR-----KS 59 + +++L +R + L+ L + R L R S Sbjct: 55 AVALLTALGARRTLRAVALGESGESVRERTLRSEAHDPALNAERINRALQRWRTRLGQDS 114 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALH--SFQLAVVGSR 116 +L L+ DS F+P L + P AL+V G+ +L +++VGSR Sbjct: 115 PARALHRAHLLRVTLVLPDSPFWPSGLDSLEHGRPLALWVRGDPSSLSGLRRSISLVGSR 174 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG L+ RG I SG A GID AH+AA+ + +++ L G + ++P Sbjct: 175 TATGYGTHVALESSAGLSDRGFAILSGGALGIDAAAHRAAIASHRLTVCSLAGGADRLYP 234 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L +L G +++E P P + F RNR+I+ +S+ +V+EA RSGSL T Sbjct: 235 AANTELLTRILAS-GLILAELPPGSAPTRWRFLMRNRLIAAVSQATVVIEAGRRSGSLNT 293 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A A + GR + A+PGP+ +P S G H LI++ A VT EE+ E PD Sbjct: 294 AGHAAQLGRPLGAVPGPVTSPESAGCHRLIREYAATCVTSAEEMAELADPFTVAGPDPVA 353 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + ++++ P + +D VA R G E+ L + G Sbjct: 354 EPVDTRILRELSRTAPR---------SRID-VAARTGIEPAELSAALGRMSALGLAIESA 403 Query: 356 GGYVRLRR 363 GG+ ++R Sbjct: 404 GGWRAVQR 411 >UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NW70_9BACL Length = 296 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 139/282 (49%), Gaps = 4/282 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-TLRQAQRFLSFPRKSIESSLC 65 L L++I + + R+ + + I + + + + A+ + ++E Sbjct: 16 LLSLVAIEKVTTLKLHRVFNDLNSIEKILDLSVPELAVYFGSNAEEIYTKLHNNMEFDFE 75 Query: 66 -WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGE 123 + E + D +YP + DYP +F G L ++++VGSR ++ Y + Sbjct: 76 SYFEFYKVKYMFCDDVYYPKEFFRVYDYPYVIFYRGNKDLLLFRRKISIVGSRNNTSYSK 135 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 L+ I SGLA G+D +AH+ AL+ G +I V+ +G N I+P + +L Sbjct: 136 DALDCIVPYLSMNNFVIVSGLATGVDSLAHEGALKSKGYTIGVIAHGHNIIYPEQSYKLY 195 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 LE+ ++SE+ P Y F RNR+++GLS +LV EAA RSG+ T AL+ Sbjct: 196 KE-LERNHLIISEYFPTSPIRKYKFLERNRLVAGLSSALLVTEAAKRSGTQRTVDFALDV 254 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 G +VF LPG G+ S + IK+GAILV + E+ + L F Sbjct: 255 GSDVFCLPGKFGDKMSYAMNEYIKEGAILVNKLEDFGDELGF 296 >UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9_9BIFI Length = 422 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 100/384 (26%), Positives = 148/384 (38%), Gaps = 39/384 (10%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G QR + P + CW Sbjct: 33 AACKALDAAFINGITRWGRTINARGMSSFH--GSLASWQQRLATLPSHDPQQLECWFTAA 90 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYG 122 +I ++P QL P L+ G+ AL + +VGSR S YG Sbjct: 91 GTQWIIAPHHPYWPSQLADLSLRTDWAAPLCLWGRGDPEALVSCPKPVGIVGSRGVSDYG 150 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + A G T+ SG A G D AH AL +G ++AV GLN I Sbjct: 151 RQCAFELARQAARAGHTVVSGGALGTDAAAHWGALAAMDEVGAGISGRTVAVFAGGLNHI 210 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ +ARL +++ GALVSE P A F RNR+I+ LS V+V +A RSG+L Sbjct: 211 GPKSNARLFERIVDGKGALVSELCPATIPEARRFLLRNRLIAALSSTVIVAQARARSGAL 270 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E RE++A+PG + P + G + LI+ G A +V +I E A Sbjct: 271 NTAGWAGELNRELYAVPGDVTMPHNTGCNRLIQDGKASIVCSLSDIGELCHEAHRPHITA 330 Query: 294 PENSFYSPDQQDVALPFP---------ELLANV-----GDEVTPVDVVAERAG------Q 333 + P D ++L + D + + Sbjct: 331 SSKAEDLPPSDDPDHCKEDDGTNTAGNDILHAIRACRSRYGTVSADGILDMLNESHPDEY 390 Query: 334 PVPEVVTQLLELELAGWIAAVPGG 357 + ++ +L LEL+G I G Sbjct: 391 SIAAIMQELGALELSGIITMEAGR 414 >UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38WY7_LACSS Length = 288 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 89/284 (31%), Positives = 146/284 (51%), Gaps = 8/284 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 + L++ + +R+A W++ + A+ + R +R+ + S +S+ Sbjct: 7 LLLKVHLAAGFGTISELRLAAWLSTSHN-WALSALEIAQIARLPERYWPTFQASFQSTTL 65 Query: 66 WLEQPNH----HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + +H + + YP +LL T P LF G+L L LAVVG+R + Y Sbjct: 66 QRQCIDHEVRTTYLTILDKDYPQRLLETYLPPVLLFYRGDLRLLKQPCLAVVGARQATHY 125 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 ++ + L TI SGLA+G D +AH+ ALQ I V+G G+N +P ++ Sbjct: 126 SKQSLEQLLQGLTA--TTIISGLAQGADAMAHEVALQRGLAPIGVIGTGINCSYPPQNEH 183 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ + G L+SE+ L P Y FP RN+II+GL ++V EA +SGSL+TA AL Sbjct: 184 L-QQVVAEKGLLLSEYALGTPARRYQFPARNKIIAGLCHSLIVTEARHKSGSLITANLAL 242 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + R V+A+PG I S+G + LI GA + + ++E L++ Sbjct: 243 QANRNVYAIPGRIDQSLSQGCNQLIAAGATPLLDKNILIEELRY 286 >UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus RepID=B3WEA3_LACCB Length = 271 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 92/269 (34%), Positives = 135/269 (50%), Gaps = 5/269 (1%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIP 76 + + H +Q+ AV L+Q F + +K + + + + Sbjct: 4 RNFLLAWHIATRQNPRMAVALEQAIRGKDDLAPFQAELKKRLTDQYSQQLIAAKHVPFMT 63 Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YPP+L P LF G+ L+ L +VGSR + Y L Sbjct: 64 YVDAAYPPRLREIPQPPLVLFYRGQSGLLNQLTLGIVGSRRATGYSATALAQLLPQL--P 121 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 + I SGLA G D +AH+AAL +IAV+ NGL+ ++P ++ L + G ++SE Sbjct: 122 SMVIASGLAAGADAMAHEAALSARLPTIAVIANGLDQVYPAKNRDLQVQI-AHVGLVLSE 180 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 +P P + F RNRII+G++ GV+V EA ++SGSL+TA AL+ REVFALP I Sbjct: 181 YPPATGPQRFQFVARNRIIAGIAHGVMVTEAEMKSGSLITANYALQHNREVFALPNRIDA 240 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENLQF 285 P G + LI+ GA LVT PE ++ENL F Sbjct: 241 PLGAGTNALIQAGAALVTGPETLVENLNF 269 >UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=Staphylococcus epidermidis RepID=Q5HPU3_STAEQ Length = 290 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 2/240 (0%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + R ++ F + + +++ N + YP DYP +F +G Sbjct: 50 SERLWNKYERFKELKLMDIIKEMKKANVSFTTYFDDNYPSLCKEMYDYPYVIFYKGNPQF 109 Query: 105 L-HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 HS LAV+GSR + Y + + + I SGLARG D VAH+ AL+ + Sbjct: 110 FNHSHSLAVIGSRNATQYTSQSLNYLFPSFRQLNMAIVSGLARGADSVAHQTALKYLLPT 169 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I VLG G +P+ L +E+ G ++SE+P P + FP RNR+ISGLS+GVL Sbjct: 170 IGVLGFGHCYHYPKATLNLRTK-VERNGLVISEYPPFSPISKHKFPERNRLISGLSRGVL 228 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + EA RSGS +T CALEQ R V+ LPG + N ++G I +GA +V + IL + Sbjct: 229 ITEAEERSGSQITIDCALEQNRNVYVLPGSMFNKMTKGNLRRINEGAQVVIDESSILYDY 288 >UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus RepID=Q2YXL9_STAAB Length = 290 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 11/291 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV-----VLQQTGL--TLRQAQRFL 53 M++ I L+L+ S + + +D + L + + Sbjct: 1 MLN-HILLKLI-WSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVN 58 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAV 112 + S++ +++ + I YP L T +YP LF + ++ L +S LAV Sbjct: 59 RYKEISVDEIETTIQKTQLNYITCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAV 118 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGS Y + + + SGLA+G D +AH+ AL+ N +IAVL G Sbjct: 119 VGSPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQ 178 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 T +P+ L + E+ G ++SE+P P Y FP RNRIISGLSKGVL+ EA +SG Sbjct: 179 THYPKSTLALRNKI-EEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSG 237 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 S +T ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 238 SHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD50_9FIRM Length = 243 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 6/208 (2%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I + YP P +F +G+++ L + +VG+R S + + L Sbjct: 41 YITIMDDAYPDAFKRLRYPPWIIFYQGDINLLKEKGVGIVGARNCSTQALQNTDRIVQRL 100 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 I SGLA+GID AH A +I VLG G+N I+P+ + L + + G + Sbjct: 101 -QSKYVIVSGLAKGIDARAHYNAT----KTIGVLGCGINVIYPKENTYLFERM-KNNGLI 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P+ V PLAY+FP RNR+I+ LS ++V+EAA +SG+++T LE ++ +P Sbjct: 155 ISEYPMHVKPLAYHFPWRNRLIAALSDSLVVIEAAYKSGTMITVNECLELSVPIYCVPTA 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILE 281 + +G ++LI GA ++ + +++ + Sbjct: 215 FQDEKHQGCNYLISNGANILVDIKDVDD 242 >UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxobacter RepID=B8JES7_ANAD2 Length = 320 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 153/296 (51%), Gaps = 10/296 (3%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + + YP +L + PG L V GEL + +A+VG+RA YGE R Sbjct: 31 SLDARTLRPGDGHYPERLARLAEAPGQLRVRGELGTA-ACSVALVGARATDEYGELLARD 89 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 LA GV++ SG A G+D AH+ AL+ G ++AVLG G++ ++PR+H L +LE Sbjct: 90 LAAGLARAGVSVVSGGAVGVDAAAHRGALEAGGHTVAVLGTGVDVVYPRQHRALFEGILE 149 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GGALVSE P P L +FP RNRII+ L+ V+VV A SGSL+TA A QG +VF Sbjct: 150 TGGALVSELPDGSPGLPRHFPARNRIIAALADAVVVVRARPGSGSLITASWARAQGVKVF 209 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG + + S GP L+++GA + + ++L L AP + Sbjct: 210 AVPGDVRDALSAGPLALLREGAGVASSAADVLAGLGLAAAAPVQAP--------LPALDD 261 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 LL +G D +A AG PV + LL LEL G PG Y LRR+ Sbjct: 262 RGTALLRALGRRPRHADELAREAGIPVGAALAGLLTLELEGLCEQRPGHYF-LRRS 316 >UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longum RepID=B7GSU6_BIFLI Length = 566 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 125/286 (43%), Gaps = 21/286 (7%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGE 101 R + P + I W +I +P QL P L+++G+ Sbjct: 120 WHNRMMDLPSQDIIQLADWFTMDGTQWIIGPGHPCWPSQLADLSIRSDWAPPLCLWIKGD 179 Query: 102 LHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ- 158 AL + + +VGSR + YG E A G + SG A G D AH AL Sbjct: 180 PRALTSCAKPVGIVGSRDVTEYGRYVAHTVAEQAAVAGHLVVSGGAMGTDAAAHWGALNA 239 Query: 159 -------VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 G ++AV GLN I P R+ L + QGGAL+SE P A F R Sbjct: 240 LHGRMPANVGRTVAVFAGGLNHIGPMRNRTLFERIEAQGGALISELCPGTIPEARRFLLR 299 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NRII+ +S ++V +A LRSG+L TA A E REV+A+PG I P + G + +I Sbjct: 300 NRIIAAMSSTLIVTQARLRSGALNTAGWACELLREVYAVPGDINQPCNAGCNKMIGDHRA 359 Query: 272 LV----TEPEEIL-ENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 ++ T E+I E + + P +++ + + A+ P Sbjct: 360 MILCAATSTEDICHERHKPVMGACPGISKSTGQDSSENEEAMEVPA 405 >UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clavibacter michiganensis RepID=B0REP0_CLAMS Length = 478 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 24/314 (7%) Query: 71 NHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALH--SFQLAVVGSRAHSWYGERWGR 127 ++ +P P L+ G A+ S +A+VG+RA + YGE Sbjct: 162 GARVLVPGDPHWPVGADDLGPHSPLVLWCTGAPDAMAALSRSVAIVGARAATGYGEHVTA 221 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L R V + SG A GIDG AH+AA+ G ++A L G++ ++P HA L A + Sbjct: 222 ELAAGLVDRDVAVVSGGAYGIDGAAHRAAIGSAGRTVAFLAGGVDRLYPSGHAELFARM- 280 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 + GA+VSE P P + F RNR+I+ S +VVEA RSGSL TA A+ R + Sbjct: 281 RRDGAVVSELPCGASPTRWRFLLRNRLIAAASAATVVVEAGARSGSLNTANHAIALERPL 340 Query: 248 FALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 A+PGP+ + S G H L+++ A+ +T +++++ + E +D Sbjct: 341 GAVPGPVTSASSSGCHRLLRESQAVCITSADDVMDLVPGWSGAGTQVQEPGSAHASSRDT 400 Query: 307 ------------------ALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELEL 347 +L + VA RAG V E + L LEL Sbjct: 401 PSGAADDRVGARAAEDRGDSRVVRVLDALAVRRGRGTADVAARAGLGVAETSSVLGMLEL 460 Query: 348 AGWIAAVPGGYVRL 361 G +A GG+VR Sbjct: 461 EGTVARPDGGWVRR 474 >UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8E5_9CLOT Length = 304 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAH--WVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR- 57 M ++ L L I + + + K + ++ + + ++ P Sbjct: 1 MNNS---LILTVIDLIGKRKTENLIEKGFFNKSTELNEKEILECIERYKERDSAFKVPSL 57 Query: 58 -------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQ 109 ++ E L + I ++ +P +L D +F +G L+ L+ Sbjct: 58 DKIKATMENSEQILLKSRELGIKCISIFNDNFPDKLKNIKDKSILIFYKGNLNCLYEDKS 117 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+R + G++ G E A G + SGLA G D H+ L + G ++A L Sbjct: 118 IAIIGTRTPTERGKKIGEALGEYYAKEGFIVVSGLASGCDTYGHRGCLNMKGQTVATLPC 177 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ +P + L +LE G L+SE+ + P F +R+R+ + LS GV+VVE A+ Sbjct: 178 GLDKYYPPENCDLGDEILENEGCLISEYKIGTNPSKIRFIQRDRLQAALSLGVVVVECAI 237 Query: 230 RSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQG-AILVTEPEE 278 G++ T + A + +++ A+ + +G +LI+ AI ++ E+ Sbjct: 238 ECGTMHTVKFAQKYNKKL-AVSLHDEVNLDIETIKGNLYLIENSDAIGLSNIED 290 >UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bacteroidales RepID=A6L5R8_BACV8 Length = 326 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 18/315 (5%) Query: 4 TEIWLRLMSISSLYGDDMV-RIAHWVA-KQSHIDAVVLQQTGLTLRQAQRFLSFP----R 57 TE+ L L + + + +IA +V S I + L ++ Q Sbjct: 5 TEMILTLQQLDGIGNKTIFNQIAKYVTNTISQISQLCEFWITLKGKKIQAITEDDLYKAH 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATT------DYPGALFVEGELHALHSFQLA 111 + ++ N +I YP L + T D P L+ +G L AL +A Sbjct: 65 DVALRIIERCKEENVGIISYYDSKYPEILKSCTNEDGKIDPPLILYYKGNLEALRKPGVA 124 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++G+R + G + G F A RG I SGLA G D H+ AL V G + A L NGL Sbjct: 125 IIGTREPTPNGIKAGLHFSREFAKRGYNIVSGLAIGCDATGHQGALSVGGTTTAFLANGL 184 Query: 172 NT--IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 + I+P+ + LA ++ GG L+SE+P+ Y+ R+R+ +GLS +V++ + Sbjct: 185 DWASIYPKENLSLAKEIVSNGGLLLSEYPVGQSCGRYSLVARDRLQAGLSYATIVIQTGI 244 Query: 230 RSGSLVTARCALEQGREVFALP----GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + G++ + + +FA+ + +G L+++G EI E Q Sbjct: 245 KGGTMHAVNATINSQKPLFAVEFKNNEDTISEKVQGNLKLVQEGQAHPLRSSEIDEAKQL 304 Query: 286 GLHWLPDAPENSFYS 300 ++ A +N S Sbjct: 305 IESYINKAKQNQQES 319 >UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBU6_9FIRM Length = 242 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 5/218 (2%) Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + + YP L P LF G L AV+GSR + Sbjct: 27 EEWERCDYDGY-YVTIYDKEYPQCFLQLEYPPWILFYAGRLELCSLPSCAVIGSRMPTQR 85 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + + LA R I SGLA+GID AH AA N +I V+G GL+ ++P+ +AR Sbjct: 86 SIHITQQVVKQLADR-YVIVSGLAKGIDAGAHTAA--CNKHTIGVIGCGLDVVYPKENAR 142 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L A + +Q ++SE+P PLAY+FP RNR+I+ LS ++V+EA RSG+L+T AL Sbjct: 143 LYAYM-KQSQLILSEYPKGTKPLAYHFPWRNRLIAALSDSIVVIEAKKRSGTLLTVNEAL 201 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 + ++ +P +P G + LI QGA ++ + +I Sbjct: 202 NLSKPIYCIPHAFADPAGYGCNLLISQGANILVDETDI 239 >UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0K1_ERYRH Length = 259 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 4/206 (1%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I YP P +F EG L L+ +AV+GSR S Y R F Sbjct: 55 YICYGDRAYPSSFYELDCPPFVIFYEGNLSFLNEQCIAVIGSRTPSEYALRMTEDFVGN- 113 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 TI SGLA GID AH+AAL SIAV+G GL+ +P +H + ++ + Sbjct: 114 VREHYTIVSGLAYGIDITAHRAALDF--QSIAVVGCGLDICYPSKHRVEFEFM-KKNHLV 170 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V P + FP RNR+I+ LS+ V V+ A +RSG++ T AL+ R V LP Sbjct: 171 ISEYPKGVHPHKHYFPFRNRLIAALSQSVYVMSAFVRSGTMHTVNEALKLNRRVICLPHN 230 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEI 279 + + G + LI++GA ++T E++ Sbjct: 231 LDDITGAGCNLLIQEGAEVLTNLEDL 256 >UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX97_9FIRM Length = 308 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 10/298 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL------S 54 M + I L L + Y + + H + H DA+ L LR+ Q+ S Sbjct: 11 MKEQLILLSLEGAN--YREIWYYLKHAIKSACHRDALQLADCQAMLREVQKEAGVLVNPS 68 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 F + +++ ++ + YP L P ++ G + L +++VG Sbjct: 69 FHFYLDDQHYVRIKELANYSLMIGERLYPSAWLEIPKPPLLVYFRGHIEWLQEPLISIVG 128 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNT 173 +RA S G+R + L G SG+A G+D + H+ AL G +IAVL G T Sbjct: 129 TRAISSQGQRDASSLTQALCQAGYVCVSGMALGVDAMVHRTALSCPGGKTIAVLPAGFGT 188 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +PR HA L L + L+SE+ + ++F RNR+++G++ ++VVEAALRSGS Sbjct: 189 CYPRSHASLMNELGQSN-LLLSEYQPHIGIKKHHFIMRNRLVAGIAPALVVVEAALRSGS 247 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 L+TA AL+ RE++ PG + + S G + LI+ GA + + + +L+ Sbjct: 248 LITANFALQYNREIYVCPGHLSDANSAGCNQLIEAGANAIYSLPDFMGDLETLYRLQA 305 >UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AMD3_SYNSC Length = 338 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 84/336 (25%), Positives = 133/336 (39%), Gaps = 27/336 (8%) Query: 40 QQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHH--------LIPADSEFYPPQLLATTD 91 Q G + + L++P + + + + +P L Sbjct: 17 QLWGWPIERFGETLAWPAHCLRDVERYRREHGASPTLDVPACALLPGDPAWPSCLDQMHL 76 Query: 92 YPGALFVEGELHALH----SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARG 147 P L+VEG+ L +AVVG+R+ S +G LA G + SGLA G Sbjct: 77 PPSGLYVEGDRSLLRHINARTAIAVVGTRSASDHGLAMAEELGRALAEAGWPVFSGLAEG 136 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 +D AH+ L NG I VLG L+ ++P H L + Q G LVS + Sbjct: 137 VDAAAHRGCLARNGAPIGVLGTPLDRVYPAHHRSLQQQVGRQ-GLLVSPSRSGCRVRPGH 195 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F RNR + ++ ++VVE RSG+L++AR A V+ +PG G + L++ Sbjct: 196 FAARNRWLVAFAQALVVVECQQRSGALISARWASRMHYPVWVVPGDARRWSCRGSNALLR 255 Query: 268 QGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 GA + PE++L ++ G ++ L+ +G T D + Sbjct: 256 DGATALIHPEDLLASIGEGPLRSEESRGK-------------HQRLMEAIGSGAT-FDQL 301 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 E+ QLL LE + G + R R Sbjct: 302 VLCLQCSPAELAPQLLALECRRELLCESGLHWRKPR 337 >UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX5_9FIRM Length = 260 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 3/206 (1%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 + YP L P LF +G L +VGSR YG C L Sbjct: 38 YVTWADAEYPALLRQLRFPPWILFYQGNLALADLPATGIVGSRRACRYGLTMTERCCGAL 97 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 I SGLA GIDG AH+AAL++ +I + G GL+ +P + L L + L Sbjct: 98 KDE--VIVSGLALGIDGAAHRAALRLCRGTIGIAGCGLDRPYPAYNRDLYTELPKAN-LL 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P PPL ++FP RNR+I+ LS ++V++A SG+++T A+E REV+ LP P Sbjct: 155 LSEYPPQTPPLKHHFPWRNRLIAALSDRIVVMQAGFHSGTMLTVNEAIELNREVWCLPYP 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEI 279 N EG + LI QGA ++ EP ++ Sbjct: 215 AMNKEGEGCNLLISQGAEILMEPSQL 240 >UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YIL5_EXIS2 Length = 275 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%) Query: 22 VRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 + A + V+++Q GL + + + +L L+Q +L+ Sbjct: 3 RELYARFATCRVPYSIVVLIEQYGLLPVEDLPVSRSIKNRYQQALQ-LDQVPTNLLVPGD 61 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 ++P LL LF G+ L ++++GSR S + F Sbjct: 62 PYFPMPLLQIPQPVYGLFFSGDPSLLRQPMISIIGSRQPSPSHSKRLS-FLRPFFESPFV 120 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 SG A GID + H+ +L+ + +IAVL +G + ++P RHA L + +Q G L+SE+P Sbjct: 121 TVSGGALGIDSLVHRLSLKHHQATIAVLASGFDFLYPARHAPLFQRI-QQDGLLLSEYPA 179 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 P + F RNRIISGL+ G+++VEA +SG++ TA ALEQG++V+ +PG Sbjct: 180 PTPVKKHQFLERNRIISGLASGLIIVEATRKSGTMNTAGHALEQGKDVYCIPGCPTEKHF 239 Query: 260 EGPHWLIKQGAILVTEPEEI 279 +G + LI +GAI + PEE+ Sbjct: 240 QGTNQLIAEGAIPLLNPEEV 259 >UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L612_EXISA Length = 264 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 129/244 (52%), Gaps = 4/244 (1%) Query: 43 GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 G +F + E + E H + + + +P +LL + P LF G+L Sbjct: 24 GTLGAHRTQFSEHVWRRAERAFQASESYK-HFVTWEEDLFPKRLLDIPNPPYCLFYHGDL 82 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L A+VGSR + + + +L SG A GIDG+ H AL+ + Sbjct: 83 EVLQERTTAMVGSRELNRISQSLVNHY-HSLIEE-TVSVSGGALGIDGLVHAHALRTHRP 140 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AVLG GL+ ++P + + + Q G L+SE+ + P + F RNR++SGL + Sbjct: 141 TVAVLGAGLDRLYPAANRDMLLQIP-QEGVLLSEYVPNTPIQKFQFLERNRLVSGLGDAL 199 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 +V++A +SG++ T ALEQG+ VFA+PG +P +EGP+ LI++GAI +T ++I+ + Sbjct: 200 VVIQARRKSGTMNTVGHALEQGKTVFAVPGSPLDPLAEGPNRLIEEGAIPLTNSDQIIRD 259 Query: 283 LQFG 286 L+ Sbjct: 260 LKIV 263 >UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=Q1MY05_9GAMM Length = 314 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 15/310 (4%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-------TGLTL 46 M E W L L +I + + +IA I ++ + Sbjct: 1 MHSKEYWKNETIAFLALANIKGVGFRTLQKIASNGLGFKSILKSDSKEELQKHIKAKIDP 60 Query: 47 -RQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL 105 + F L LI + E YPP L D P LFV+G L +L Sbjct: 61 NKSWHDFQLEAWAKGIELARELSAQQTRLIFLNEECYPPLLKKIPDPPYWLFVQGNLDSL 120 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + +A+VG+R + G + +A++ TI SGLA GID AHKAAL+ N ++A Sbjct: 121 NEKPVAIVGTRKPNEDGILLTSIAVAGIASKNRTIISGLADGIDQTAHKAALKYNLKTVA 180 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 VLGNGL+ +P +L + ++ GGA+V+E+ + A NF +RNRI +GLS+ ++ Sbjct: 181 VLGNGLSIDYPAGSEKLKSEIINSGGAIVTEYLPNQTYSAENFVKRNRIQAGLSETIIPA 240 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + + SG+ T A++ R++ L P G ++I + P E E L + Sbjct: 241 QWKVNSGTGHTVNFAIKYDRKIAGLKLPNQFHGCSENEYIISANGQVFELPIETREFLHY 300 Query: 286 GLHWLPDAPE 295 Sbjct: 301 LDQPRQPIQA 310 >UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZK2_CLOB6 Length = 385 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 7/273 (2%) Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQL 110 + ++ L ++ + +S FYP L + P L+++G + L + Sbjct: 62 LIENSLNKAKNILKINKELRIRTVLINSRFYPGNLKKMDNAPAILYIKGKNITKLDEKAV 121 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A VG+R + +G + +LA +I SGLA GID +HKA L V G +IA+L +G Sbjct: 122 ACVGTRTPTIFGIKAANSIVGSLAKENFSIISGLALGIDAESHKACLNVGGRTIAILAHG 181 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ I+PR + L+ S+L GG L+SE+P+ P + F RNRI+SGLSKG +V E + Sbjct: 182 LDMIYPRENIELSKSILNNGGTLISEYPVGTKPDKFRFVDRNRIVSGLSKGTIVFETKEK 241 Query: 231 SGSLVTARCALEQGREVFALPGPIGNP-GSEGPHWLIKQGAILVTEPEE----ILENLQF 285 SG++ T L+Q ++VF P P+ + G L+ + + + ++ I+ L + Sbjct: 242 SGTMHTVDYTLKQQKKVFC-PIPLKQELQTSGLIKLLNENKAIGIKTKDNYDVIVHELGY 300 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 + + A + + + L L V Sbjct: 301 KIKYDTKAIIKNKSENINKLITLDNNILNDIVS 333 >UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O67250_AQUAE Length = 327 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 89/362 (24%), Positives = 146/362 (40%), Gaps = 47/362 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF---LSFPRK 58 D +++RL + + + +I + +++ L++ L ++A+R L R Sbjct: 8 EDLVLYVRLADTNGVGLKSVKKILYHFKSIRNLNEKELERL-LGTKRAERVVLSLETERN 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E + +++ + I + + YP L + P LF +GE +VG+R Sbjct: 67 FEEKLINIIDKNDIKFILYEDKEYPEILKGIDEPPPYLFYQGEPP---EGGYGIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S E++ G I SG A GID AH +L+ + +LG G+ I R Sbjct: 124 SKLSLNAVEKLLESI--EG-PIISGGAVGIDFKAHFESLKHGFKNFVILGTGILKIESR- 179 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 L G +LVSEF + FP+RNRII+GLSK + V+EA +SG+L+TA Sbjct: 180 ----IKKLKGMGASLVSEFLPWTEGSKWTFPKRNRIIAGLSKKLFVMEAGSKSGALITAD 235 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A GRE++A G + +G LI++G Sbjct: 236 YAHRYGREIYAYVGDEHSERWKGCLKLIEEG----------------------------- 266 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D + +LL + D V + EV L L + G + G Y Sbjct: 267 -KAKRLDFSSEKDKLLEFLS-VPRTFDEVISFLKRERKEVFKILSSLIIQGKVVQE-GAY 323 Query: 359 VR 360 + Sbjct: 324 YK 325 >UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWU9_9BACT Length = 292 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 117/240 (48%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + ++ + + L E+ ++ YP +L + P LFV G+ Sbjct: 51 ILADLSRPERDVLAERLLILLDKAERLGLKMMHPGHPDYPSRLGTLSAPPFFLFVRGDAT 110 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG+R + L+ G+ + SGLARG+D AH+ AL+ + Sbjct: 111 ILDRPLVAVVGAREAGRESLLEVTGLSKNLSEAGLVVVSGLARGVDAAAHRGALEAKRPT 170 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AV+G GL+ ++P + LA + GG ++SE+P P ++FP RNRI++GLS V+ Sbjct: 171 VAVVGTGLDRVYPPENVGLAREIERTGGLILSEYPPGSGPDGWHFPHRNRIVAGLSLAVI 230 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 RSG+ VTAR ALE+GRE+ EGP L +GA E++E L Sbjct: 231 AGPHRRRSGTYVTARIALEEGRELLVFDRGARGWECEGPALLEGEGAKRAGSAMEVMEAL 290 >UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID=C6WBB2_ACTMD Length = 314 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 14/295 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFP 56 M TE LRL+++ + + IA + +D A+ L+ + + + Sbjct: 1 MRPTEEQLRLLALCKVKDVNWYLIAREAQRPGGVDRLWKALPLEASADATKAIKALKPLN 60 Query: 57 RKS------IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL 110 + ++ + + + + L+ + +PP L + P LFV G + + Sbjct: 61 GATDEYIAMAQAEVDKVREDDVRLVTVLDDEFPPNLRLIPNAPPFLFVRGTMTDADLRSV 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 AVVG+R S G + L RGVT+ SGLARGID AH A L+ G +IAV+G G Sbjct: 121 AVVGTRDASEAGRQRAGRMARELVERGVTVVSGLARGIDTAAHTATLKAGGRTIAVIGTG 180 Query: 171 LNTIHPRRHARLAASLL-EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 +N P + L + + GA+VS+F D + FPRRN +SG+++G +V+EA Sbjct: 181 INRYFPAENRVLTDKIATDGQGAVVSQFWPDASGATWTFPRRNITMSGIAQGTVVIEAGS 240 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENL 283 SG+ + AR ALE G++VF + E ++ +GA+ V + + + + L Sbjct: 241 TSGAKMQARVALEHGKKVFLIKS--LTEQQEWARKYVETRGAVQVEDVKAVADAL 293 >UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BF27 Length = 378 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 100/353 (28%), Positives = 155/353 (43%), Gaps = 21/353 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + W L + +VR+ + + + GL + R + Sbjct: 1 MDEIHAWAYLNRVVEATHPQIVRLVTEFGPVEVAERIKAR-AGLPEGLLN--TTQARADV 57 Query: 61 ES---SLCWLEQPNHHLIPADSEFYPPQLLAT----------TDYPGALFVEG-ELHALH 106 + L LI +P +LL+ P AL+V G +L + Sbjct: 58 DQSGHDLESAAAMGWRLIYPGHPEWPGELLSCFTTLEVRDRADAPPLALWVRGRDLREML 117 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 S +A+VG+R S YG + F A GV + SG A GID AH+AAL G ++ V Sbjct: 118 SEAVAIVGTRMASSYGTQVAAQFAGQFANAGVGVISGGALGIDAAAHRAALDAGGTTVVV 177 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G+ +PR HA L + E+ GALV+E+P V P + F RNR+++ LS+ +VE Sbjct: 178 GAGGVGVDYPRTHAELFDRIAER-GALVTEYPPGVRPARHRFLTRNRLVAALSRATTIVE 236 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 A RSG+ TA A+ + + A+PGP+ + G H LI+ G A+LV + + + Sbjct: 237 AGWRSGARNTAHWAVRLNKPLGAVPGPVTLQTTSGCHDLIRSGEAVLVCSADNVRSLYRS 296 Query: 286 GLHWLPDAP-ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVP 336 DA E + Q ++ + ++ E TPV VA +AG V Sbjct: 297 VGTVNEDAQLELLWEKSAVQKLSRNELAVFDSLNSAEPTPVGEVAAQAGLAVA 349 >UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LR98_HALO1 Length = 297 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 130/294 (44%), Gaps = 21/294 (7%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCET 132 + D YP +L A L V G + +AVVG RA + R F Sbjct: 8 LRPDDAAYPERLHALPPERPTLQVRGAIAPWARAARSIAVVGLRAATARDVERARGFGRD 67 Query: 133 LATRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNGLNTIHPRRHARLAASLL 187 +A G + SG A G+D AH+ AL+ GV+ VLG G++ ++P RH L + Sbjct: 68 IAASGAAVISGGALGVDAAAHRGALEVAAQPGAGVTAVVLGCGIDVVYPARHRALYHEVC 127 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GGAL+SEFP PP +F RRN I+ L+ VLVV A RSGSL TAR A + GR V Sbjct: 128 ASGGALISEFPEAAPPRPGHFVRRNTTIAALADAVLVVAAGARSGSLHTARAARKLGRLV 187 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG G L+ GA+ V EP + + L + A + A Sbjct: 188 AAVPGTP------GCERLLADGAVAVREPNHLWDALAGRVRAPEVALPSPGSDAALVLAA 241 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L L D +AERAG L+ LEL G A+PG Sbjct: 242 LDARRGLD--------PDQLAERAGLSARACARALIGLELCGLAVAMPGQSYAR 287 >UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=A9WP58_RENSM Length = 323 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 141/321 (43%), Gaps = 12/321 (3%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGE--LHALHSFQL 110 P+ + E L + L+ + +P L P L+ G L AL + Sbjct: 7 RLPQVAAERDLTTMASIGGGLLIPEDAAWPAGLKDLGLAAPIGLWFRGTSGLPALSD-CV 65 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV----SIAV 166 AVVGSR + YG LA R T+ SG A GID A++AAL +IAV Sbjct: 66 AVVGSRDSTAYGNAVVADIAHGLAVRRKTVLSGGAYGIDAAANRAALTAKSAESVATIAV 125 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 + GL+ +P + L + Q G L++E P P Y F +RNR+I+ LS +VVE Sbjct: 126 MAGGLDRFYPAGNELLLREI-SQSGLLLAEVPPGCNPTRYRFLQRNRLIAALSSATVVVE 184 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 A RSG+L TA A E GR V A+PG + + S G H L+++G A+ V++ EI E + Sbjct: 185 ARWRSGALNTAHHAAEMGRHVAAVPGSVYSANSAGCHRLLREGAAVCVSDAAEICELISP 244 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 P + L + L + V+ +A AG V L L Sbjct: 245 SGVLSPMHIPDRAEHDGLPAEDLLLLDALPV--RRGSSVEKLAGVAGLDEASVRAGLGRL 302 Query: 346 ELAGWIAAVPGGYVRLRRACH 366 EL G++R R + Sbjct: 303 ELLELAKRSENGWLRRRPSST 323 >UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N822_SLAHD Length = 231 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 103/203 (50%), Gaps = 1/203 (0%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 +I D E YP +LL D P L V G+ L LAVVG+R S YG + Sbjct: 9 VIARDDERYPHRLLDLPDPPRELHVMGDPGILEMPSLAVVGARKCSPYGMDVAVHIADVA 68 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 A G+ +G A G+ A + L I VLG+GL+ +P + L +++ GG + Sbjct: 69 ADEGMATVTGGAVGVPTGAMRGTLAAEAFGIVVLGSGLDNPYPSDNIDLFQAIVGGGGCV 128 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 V+E+ +PP Y F RNR+I+ LS V+VVE + SGS A+ GR VFA PGP Sbjct: 129 VTEYYDQMPPRPYMFRERNRLIAALSSAVVVVECGMPSGSFSLCDTAMSLGRPVFAFPGP 188 Query: 254 IGNPGSEGPHWLIKQG-AILVTE 275 I + S G + LI G A V + Sbjct: 189 ITSHASTGCNVLIANGQASCVDD 211 >UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB84_BRAFD Length = 428 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 96/338 (28%), Positives = 160/338 (47%), Gaps = 12/338 (3%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWL 67 L + + + +++ + + R +R+ S + ++ Sbjct: 68 ALELVDAGTEETLLQALDGHVPRDTAEPAGSSSRARAARALERWRSRRARIDVDRVRADA 127 Query: 68 EQPNHHLIPADSEFYPPQLLATTD-YPGALFVEG--ELHALH-SFQLAVVGSRAHSWYGE 123 + ++ +P L P L+V G +L +L + +A+VGSRA + YGE Sbjct: 128 ARRGIRILIPQDPQWPALLNDLQHTAPHCLWVHGPGDLASLTGARTVALVGSRASTPYGE 187 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGNGLNTIHPRRHARL 182 A G T+ SG A GID AH+ AL +G ++AVL GL++++PR +++L Sbjct: 188 DTAASLAAAFAAGGGTVVSGGAYGIDAAAHRGALAAEDGATLAVLAGGLDSLYPRGNSQL 247 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + + LVSE P P + F RNR+I+ LS+ +VVEA+ RSG+L TAR A + Sbjct: 248 LERIRARH-LLVSEAPPGTAPTRWRFLARNRLIAALSQATVVVEASWRSGALSTARLADQ 306 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R V A+PGP+ + S G H L+++ GA+L+TEP ++L+ L G + Sbjct: 307 LSRPVGAVPGPVTSAASAGSHRLLRERGAVLITEPADVLDLLPGGPAAGEGSHAVQ---D 363 Query: 302 DQQDVALPFPELLANVGDEVTPVD-VVAERAGQPVPEV 338 + ++ +L V + + VAE G V EV Sbjct: 364 ELDLLSPSDRRVLDAVPPRSSIAEHRVAEEIGFSVAEV 401 >UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLE2_FIBSS Length = 290 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 129/275 (46%), Gaps = 4/275 (1%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 E YP L A+ P LF G L + +A+VG+R S E R +L Sbjct: 8 ENYPLALGASKYSPKQLFCIGTLPSTDKIGIAMVGTRRPSASAEELCRRLIGSLKATNAV 67 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 + SGLA+GID H+AAL +IAVL GL T LA +L+ GGAL+SE+ Sbjct: 68 VISGLAQGIDSFCHRAALDAGIPTIAVLAQGLGTKIEGERGILAKRILDAGGALLSEYEG 127 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 D P NF RNRIISGLS+ LVV++ + G+L+TA+ L++G+++ A PG Sbjct: 128 DTPAYKGNFIARNRIISGLSQSTLVVQSRKKGGALLTAQFCLDEGKQLLACPGNFDCELY 187 Query: 260 EGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G + L+ G A V PE + L + + Y ++ ++ Sbjct: 188 SGTNTLLDSGHAKAVFIPESLRAVAGIPLLEGAKMEQLTTYGVQ---LSDGAQKIFERFN 244 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + PE++ L ELE++G + + Sbjct: 245 GFRKTFSELQQEFDFKPPELLAILTELEISGLVTS 279 >UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976538 Length = 504 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 120/277 (43%), Gaps = 18/277 (6%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFYPPQLLATT-----DYPGALFVEGE 101 QR + P + W +I ++P +L P L+ G+ Sbjct: 99 WQQRLRTLPTWDRDYLCGWFTMEGRQWIIAPHDVWWPTRLNDLALLGRCAPPLCLWGSGD 158 Query: 102 LHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 AL + +VGSR + YG R A G + SG A G+D AH+ AL Sbjct: 159 RAALTSCPQPVGIVGSRGVNEYGRRLTTDIAVHAAQAGHLVVSGGAMGVDAAAHRGALDA 218 Query: 160 --------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 G ++AV GLN P+ ++ L + E GGALVSE P A F R Sbjct: 219 MRAYGIGRAGRTVAVFAGGLNHAGPQCNSELFDGIAENGGALVSELCPGTIPEARRFLSR 278 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-A 270 NRII+ LS ++V +A LRSG+L T E R++ A+PG I PG+ G + LI++ A Sbjct: 279 NRIIAALSSTLVVTQARLRSGALNTVNWGSELQRDIHAVPGNIDMPGNGGCNRLIQEQRA 338 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 +V + ++++ H + + D D Sbjct: 339 TIVCSVAD-MDDVWHAPHPPESFHDVATQRKDGSDCD 374 >UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAA0_9FIRM Length = 336 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 1/236 (0%) Query: 70 PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 + L+ + Y L T + P LF++G +H L + VVGSR S + Sbjct: 102 NDVILVKKGDQAYSKLLATTKEAPPYLFLKGNVHLLEEKSVCVVGSRNASEESLKKTERI 161 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 ++L R + + +GLARGID H AAL G +I V+G +N +P+ + L + E+ Sbjct: 162 VKSLVKRNIVVNAGLARGIDTATHTAALANGGRTIVVIGTPINQYYPKENKDLQIQI-EK 220 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G +VS+FP P +NFP RN ++SG+S ++++A SG+L A AL+QGR+V Sbjct: 221 NGLVVSQFPPCNPINRWNFPTRNGVMSGISLATIIMKAGESSGALKQADYALKQGRDVLI 280 Query: 250 LPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 I NP + P I +GA +E+L+ L L + S + D Sbjct: 281 PQSAIDNPLIQWPKTYISKGAHAFKTLKEVLQILNRNELLLNMLDNDMKVSTVEMD 336 >UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX4_9FIRM Length = 241 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 123/230 (53%), Gaps = 10/230 (4%) Query: 57 RKSIESSLCWLEQPNHH-----LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 K++E ++ E+ ++ I YP + P LF G + L ++ Sbjct: 17 WKAVEQAILQEEENPYYTVYEPYITYLDPEYPEEFRHLEYPPWVLFYRGNVAILEKRKVT 76 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VGSR S GE + + C L + + SGLA+G+D + H++ L+ +IAV+G+GL Sbjct: 77 IVGSRKISERGEYYTKQVCAKL-KKDFVLVSGLAKGVDAMVHQSCLEDGL-TIAVIGSGL 134 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 +PR + +L L + ++SE+P V +FP RNR+++ L + ++V +A RS Sbjct: 135 EVHYPRCNEKLYQQ-LSRNHLILSEWPGYVGVQKVHFPWRNRLLAALGEKIIVTQAKSRS 193 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 G+++T + AL+ G++V+ LP P+ G + LI++GA L EE+ E Sbjct: 194 GTMITVQEALQLGKDVYCLPYPLDEIEGSGCNQLIQEGASLY--IEEVFE 241 >UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1ACU7_ECOK1 Length = 349 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 123/312 (39%), Gaps = 14/312 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-----DAVVLQQTG---------LTLR 47 ++ L L I + + ++A + I A G L Sbjct: 33 TESAALLALSEIHGVSYWTLYKVAQKGIRFRDIVTSQTLANFEYLLGVKLHRQPYYLNEG 92 Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 F + + L + +I S YP +L ++ P LF +G + L Sbjct: 93 NWSVFRDSMISTAKILLTHYHNSGYKIIHHGSPSYPDKLNDLSEPPFWLFAQGNVSLLDK 152 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + VVG+R + G + + SGLA GID AH+A+L +IAVL Sbjct: 153 KCVGVVGTRNPTALGIYLTQAVISQFIDSDYSTVSGLAYGIDQSAHEASLLFKIPTIAVL 212 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G G+N+ +P+ + ++ GG +++E+ + P NF RRNRI + LS ++ VE Sbjct: 213 GTGVNSNYPKNSGEMRGHIVNNGGLILTEYLPNQKPSQENFVRRNRIQAALSDVLIPVEW 272 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 L+SG+ T R A + R + P E H L + A ++ P +++Q + Sbjct: 273 GLKSGTSHTVRYAAQLKRAILCPLLRGTTPQEEIKHALSEYSATIMNIPLSDFKDVQSLI 332 Query: 288 HWLPDAPENSFY 299 Sbjct: 333 KSASGVKTQQLS 344 >UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR Length = 335 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 136/334 (40%), Gaps = 24/334 (7%) Query: 1 MVDT-EIW-------LRLMSISSLYGDDMVRIAHWVAKQSHI--------DAVVLQ---- 40 M + E W L S+ + + +IA + + L+ Sbjct: 1 MTEEHEYWRAETVAFYALQSLHGVGFRTLYKIAAQKISFRELIRCDEPSMFSSTLRTKLP 60 Query: 41 -QTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVE 99 + +F S + ++ + YP +L +D P LFV+ Sbjct: 61 TSVTESAESWDKFKKELWAKGTSMARINASKDIKVVFYGQDAYPERLKHISDPPMWLFVQ 120 Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L LH+ +A+VGSR S G +L +A G+ SGLA GID AH +++ Sbjct: 121 GALSNLHTQSVAIVGSRKSSDDGHWLTKLIVAGMANTGLVSVSGLADGIDQKAHIESIRF 180 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 N ++AVLG G+++ +P+ + +L GG +V+E+ + +NF +RNRI +GL+ Sbjct: 181 NVPTVAVLGTGIDSNYPKGSEVVREQILAGGGTIVTEYLIGQSYSGHNFVQRNRIQAGLA 240 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+ VE ++SG+ T A + R + P NP S+ + +V Sbjct: 241 TCVIPVEWKIKSGTAHTVNFAKDFNRYLVMPYLPDANPESDELKAISSYKHGVVFNVPAQ 300 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVALPFPEL 313 E L + +L + D+ ++ Sbjct: 301 TEEL---ITFLKEPSTQESIESPDSDLNDGERQI 331 >UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V888_VIBAL Length = 329 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 113/247 (45%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 TE L + + + +A V + ++ + Sbjct: 6 TESLLAYRYLKGVGKKYLNELAISVETTKQSIDSCFESGRFGGVFSKEDIEEAFSKAREQ 65 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + H +I YP L A +D P LF G +H L + V+G+R + +G Sbjct: 66 IDISTSFGHFIISRLDPEYPQSLKAVSDAPPILFCSGNIHLLKKECITVIGTREPTEHGV 125 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + G I SGLA+G+D +AH++ L+ G +IAVL +GL ++P ++ LA Sbjct: 126 VIADRVTQWFSDNGWVIASGLAKGVDTIAHESCLRAGGETIAVLAHGLEKVYPAQNKELA 185 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + +++ G L++E+ + NF R+RI + L+K V++V++ L GSL +R +E Sbjct: 186 SEIVKSNGLLITEYNYNSFVGRSNFVERDRIQAALAKAVVLVQSDLVGGSLHASRAIIEY 245 Query: 244 GREVFAL 250 GR + + Sbjct: 246 GRFLVVV 252 >UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRS5_9ACTO Length = 310 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 10/242 (4%) Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT---TDY--PGALFVEGELHALH--SFQ 109 R L + +I + +PP+L D P L++ G Sbjct: 65 RAVATEQLERSREAGARIIVPGDQEWPPRLGDLARVPDAVVPWCLWLRGPAPLAQTTEQS 124 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG-VSIAVLG 168 +A+VG+R + YG +A+ G + SG A GID AH+A L +IAV+ Sbjct: 125 VAIVGARCCTPYGHTVASELAFQVASSGWAVASGGAYGIDVAAHRAVLAAEAAPTIAVVA 184 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ +P H + + Q G +VS+FP+ P + F RN++++ L++G +VVEAA Sbjct: 185 CGVDQYYPSGHREVFDRI-AQTGLIVSQFPVGFAPQRHRFLTRNQVLAALTRGTVVVEAA 243 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGL 287 RSG+ A GR V +PGP+ + S G H +++ A +VT E+L++L + Sbjct: 244 ARSGAKHCLGQAAAMGRYVAGVPGPVTSAYSRGVHQVLRDQHARVVTSGVELLDDLASVV 303 Query: 288 HW 289 Sbjct: 304 GD 305 >UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyrococcus furiosus RepID=Q8U1A8_PYRFU Length = 217 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + IP DS YPP L D P ++ G + L+ +A+VG+R S GE + Sbjct: 16 RRKITRIPIDSPDYPPLLKQIKDPPKIIYAIGNVRLLNKPAVAIVGTRQPSERGEYYAEK 75 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 E A +G I SGLA GID + K AL+ I VL + +N I P+ + +LA ++ Sbjct: 76 VAEFYAKQGFVIVSGLALGIDSIVIKTALKTGAHVIGVLPSPVNDIVPKSNEKLAEKIIR 135 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GG L+SE P P Y+F RRNRIISG+S V+V+E+ L+ G++ T + A +Q R + Sbjct: 136 SGGLLISELPEGTKPKKYHFVRRNRIISGISFAVVVIESELKDGTMHTVKFAKQQRRIIL 195 Query: 249 ALPGPIGNPGSEGPHWLIKQG 269 + N + G L +G Sbjct: 196 -----VTNLPASGNAKLKNEG 211 >UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVJ4_9SYNE Length = 293 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 16/269 (5%) Query: 23 RIAHWVAKQSH-IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEF 81 ++A A +H + +V+ ++ + + L + + Sbjct: 34 KLAKLFASFNHELPSVIAREQNASPGIIKAVKC-------KIADLLPFRSFSALFYGDFE 86 Query: 82 YPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTIT 141 YP L + L+ +G L L S ++VVGSR + G R R L T+ Sbjct: 87 YPTTLRDAKNPIEVLYYQGNLDLLSSKAVSVVGSRKPTDEGRRRARKIARLLVASDFTVM 146 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL-- 199 SGLA GID AH+AA++ G +I+V+G LN ++P+ +A L + + LV++ P Sbjct: 147 SGLATGIDTEAHRAAIEAGGRTISVIGTALNEVYPKENAELQRKI-SKEFLLVTQVPFYQ 205 Query: 200 ----DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 D FP RN+ +S LS+ ++VEA+ SG+L+ AR AL+QGR++F L Sbjct: 206 YSMQDYRRNRGFFPERNKTMSALSQATIIVEASETSGTLIQARAALQQGRKLFILKSC-F 264 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQ 284 + G E P +K+GAI + + E+LE L+ Sbjct: 265 DRGLEWPERFLKRGAIKIEDGSEVLEQLR 293 >UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:H6 str. E2348/69 RepID=B7UMR1_ECO27 Length = 319 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 85/252 (33%), Positives = 127/252 (50%), Gaps = 9/252 (3%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 + + L LIP SEFYP L T + P L+++G+ L Sbjct: 53 LKDKISETDFLIANAELENHHVNGVELIPYGSEFYPLSLAFTPNPPSILYIKGDKSILKE 112 Query: 108 -FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +A+VGSR S GE R + + G + SGLA G D AHKA LQ G +IAV Sbjct: 113 LPGVAIVGSRDTSPAGEEITRRITNQIVSAGYIVVSGLAIGTDANAHKATLQAKGKTIAV 172 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L +GL P++++RLA +L++GGA +SE+P+ P +F +RNRI GLS G +++E Sbjct: 173 LAHGLEEAKPKQNSRLAQEILDKGGAWISEYPMGRPAQKQSFVQRNRIQVGLSAGSILIE 232 Query: 227 AALRSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQG-AILV---TEPEE 278 AAL SG++ A A + R VFA+ P N EG L+K A + + ++ Sbjct: 233 AALNSGTITQAEFANKAKRPVFAVVPHLPNNPLNLNCEGTVDLVKSNMARALKTKRDYDD 292 Query: 279 ILENLQFGLHWL 290 ++ + +L Sbjct: 293 VIMIINESREYL 304 >UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8I4_HAHCH Length = 233 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERW 125 ++ IP +S YP L + + P L+ G L L+ +A+VG+R + G Sbjct: 2 HKKFGVIAIPLNSSEYPKHLKSIANPPATLYARGNLDLLYEAPGIAIVGTRNATANGLEI 61 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + ++G + SGLA GID AH+ L G +IAVL +GL+ PR++A L + Sbjct: 62 TKRVAAYAVSKGAIVVSGLALGIDAAAHQGCLNAGGRTIAVLASGLHIATPRQNAGLGDA 121 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 +LE G VSE P PP F RNRI GLS +++E+ ++SG+ A+ +++ Sbjct: 122 ILESDGLWVSEHPEGTPPARQYFVPRNRIQVGLSACSVIIESDVKSGTTTHAKFCVQEKH 181 Query: 246 EVFAL---PGPIGNPGSEGPHWLIKQ-GAILVTEPEE 278 +FA+ P S GP +++ GAI + + Sbjct: 182 PLFAVVPQPRNPFGLNSAGPEMMVRDMGAIPLKTRND 218 >UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacteria RepID=Q2BRM6_9GAMM Length = 325 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 80/317 (25%), Positives = 133/317 (41%), Gaps = 28/317 (8%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHID-----AVVLQQTGLTLRQ 48 M + + W L L + + + +++ I + G+ ++ Sbjct: 1 MTNQDYWRNETVAFLALSELKGVGYWTLYKLSCKNISFKKILKEYTKEELESLLGIKIKL 60 Query: 49 -----AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 F +S +L L +I D + +P L D P LFV+G+L Sbjct: 61 PSDTGWDEFCIALWESGIEALRSLHAQKVLMIFHDQDSFPESLKDLADGPRWLFVQGKLE 120 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG+R + G + F L+ + SGLA GID + H +L+ + Sbjct: 121 NLSKKSVAVVGTRKPTDDGVFLTKYFVAALSEHSLLTVSGLAYGIDQITHLESLRYGIPT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVLG G+ +P+ + ++ +GG +VSE+ + NF RRNRI + LS V+ Sbjct: 181 VAVLGTGILQNYPKGSEEIRLRIVSEGGTIVSEYLPNQSYSGENFVRRNRIQAALSTFVV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-----KQGAILVTEPEE 278 VE ++SG+ T A R++ I P + G + K AI V P+E Sbjct: 241 PVEWKIKSGTAHTVEFANRYQRKII----NIFLPSTYGLREELSFSESKYNAISVEIPKE 296 Query: 279 --ILENLQFGLHWLPDA 293 +L++L G H Sbjct: 297 HAVLKDLLQGDHASSQK 313 >UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU48_9BACI Length = 191 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 1/183 (0%) Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + ++AVVGSR Y + L SGLA G D AH+ + + G + Sbjct: 5 LMRERKIAVVGSRKADEYTTAALKKLLPQLVEEQFITVSGLAAGADEFAHRLTITLKGDT 64 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + V+G G I+P + LA + ++ L+SE+P D P ++FP RNRIISG++ VL Sbjct: 65 VGVIGGGFRHIYPASNRDLANFMAKKH-LLISEYPPDTRPQRWHFPMRNRIISGMTSAVL 123 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V +A+ +SGSL+TA +L +GR+V+ALPG + +P SEG + LI+QGA L+T E+I+ Sbjct: 124 VTQASRKSGSLITAEISLNEGRDVYALPGRLDSPLSEGCNHLIQQGAKLITSSEDIISEF 183 Query: 284 QFG 286 ++ Sbjct: 184 KYD 186 >UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirillum sp. Group II RepID=B6AM77_9BACT Length = 306 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 121/244 (49%), Gaps = 2/244 (0%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + R+ L ++ +I D YP LL D P LF G L +A+ Sbjct: 64 MEIFREKAVRVLDKAKRQGIMMIAIDEPAYPEILLRLPDPPLVLFFRGVLP--GRPGIAM 121 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + R L+ G+ I SGLA G+D AH+ AL G ++AV+G GL+ Sbjct: 122 VGTRRPTVEARRGFESLAAGLSRFGLPIVSGLAAGLDAAAHRGALLGKGTTVAVVGTGLD 181 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P H LA +L GG +VSEFP PP ++FP RNRI+ GLS G++ SG Sbjct: 182 RVYPDFHRTLAGEILSGGGCIVSEFPPGSPPDGWHFPFRNRIVVGLSAGIVAGPHRRASG 241 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 + VT R AL +GR+V +EGP L++QGA V+ E+++ L + Sbjct: 242 TSVTVRRALGEGRDVVVYDRGGFGETTEGPEALLEQGARRVSSAEDVILALGETGIGGKE 301 Query: 293 APEN 296 ++ Sbjct: 302 VRQD 305 >UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus RepID=B0RJ66_CLAMS Length = 317 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 9/247 (3%) Query: 47 RQAQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGE 101 A + ++ + + SL + ++ +P L + P AL+V G Sbjct: 71 ALAAQLRAWRERFIVDDVFRSLRTAAECGATVLIPSDPQWPRGLADLGPEMPYALWVRGH 130 Query: 102 LHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + LAV+G+RA + YG L G+ I + + GIDG A +AA+ Sbjct: 131 TDRMIRLERSLAVIGARAATVYGSAVTSESVSELVREGIAIVNSGSFGIDGAALRAAVGS 190 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G + AV+ +G++ +P HA L ++E GA+V+E P P ++F RNRI++ LS Sbjct: 191 TGSAFAVISSGVDVTYPHAHAELFEDVIET-GAVVTERPPHTAPSRWSFLSRNRILAALS 249 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEE 278 G +++E + RSG+L+TA+ AL+ GR V A+PG + +P + G +I+ GA LVT E+ Sbjct: 250 SGTVLMEGSHRSGALLTAQRALQLGRPVGAVPGQVDSPSAGGCLTMIRDHGATLVTGHED 309 Query: 279 ILENLQF 285 + L Sbjct: 310 MSRLLPP 316 >UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G684_NOVAD Length = 345 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 8/257 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--------GLTLRQAQRFL 53 + +L L ++ + + +A S + + ++ R R Sbjct: 31 DEERAFLALATVRGIGQKTLFAMADDKRSFSDALEYGPEASNPAGSDGKAISERHWSRVR 90 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + + LE L+ S +P LL P LFV+G + L +AVV Sbjct: 91 GHALEQGDRLAEHLEALGIGLLFRGSPGFPSALLDLERPPHWLFVQGSVERLAEPSIAVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S G R L GV SGLA GID +AH+ +L+ +IAVLG G+ Sbjct: 151 GTRKPSADGFFLSRYVGACLGEWGVPTVSGLAAGIDQLAHEHSLRAGVPTIAVLGTGMLE 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P+ RL +L GGA+VSE+ A NF +RNR+ + L + ++ E RSG+ Sbjct: 211 DYPKGSGRLRDHILATGGAIVSEYLPTASYSAENFVQRNRLQAALGRILIPAEWNRRSGT 270 Query: 234 LVTARCALEQGREVFAL 250 T R A GR + L Sbjct: 271 AHTVRFATALGRPIACL 287 >UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinalis AWQC310F RepID=D1FNP2_9NOST Length = 208 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 2/205 (0%) Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 LQ +IAV+G G++ I+P +++ + +L + G ++SE+P PP +FPRRNRII+ Sbjct: 3 LQAGRKTIAVMGTGVDVIYPHKNSHKSPQIL-KSGIVISEYPAKTPPNRTHFPRRNRIIA 61 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE- 275 GLS+ VLV+EA L+SG+L+TA A E R+V+ALPG I + S+G LI QGA L+ Sbjct: 62 GLSRAVLVMEAPLKSGALITATYANEFNRDVYALPGKIDDQPSQGCLKLISQGAGLINHQ 121 Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPV 335 E+L L + SP ++A +++ + + D + ++ G Sbjct: 122 LNELLIMLGAIPQIDIETETPLVKSPPIPNLAPELQQIINILAIDALSFDFIIQKTGMNA 181 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 V + LL+LEL G + +PG + Sbjct: 182 AIVSSSLLQLELMGLVTQLPGMRYQ 206 >UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6R6_PARDP Length = 331 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 14/303 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--------LQQTG--LTLRQAQRFLSFPR 57 L L SI + + + +I+ + + + L+ G L+ A + S Sbjct: 23 LALSSIKGVGFETLRKISERGIAYAEVIDLQNKNDVSTILRSAGARLSDETAAPWGSTRE 82 Query: 58 KSIES---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +++ L L + + +I + YP QLL D P LFV+G L +AVVG Sbjct: 83 RALSRGYELLDRLTKIDGKVIFHSDKEYPSQLLDLPDAPRWLFVQGNSEVLRGPSIAVVG 142 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G R L+ SGLA GID H A+L+ +I+ LG G+ + Sbjct: 143 SREPSDDGIWLSRYVGFNLSEWSCPTVSGLAVGIDQEIHSASLRAGVPTISFLGTGIFSD 202 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR +L ++ + GGA+V+E+ + NF +RNR+ + L+ ++ VE A +SG+ Sbjct: 203 YPRNSEKLRDAIAKSGGAIVTEYLPADTYSSKNFVKRNRLQAALAAALIPVEWAAKSGTA 262 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 T R A R + L P + + I + A + T P++ LE +QF L + P Sbjct: 263 HTVRYAASLSRPIACLRLP-FGKVPDWVNTEIAKKASVFTVPQQQLEFVQFVLASVRSRP 321 Query: 295 ENS 297 E Sbjct: 322 ERQ 324 >UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepID=Q04VL7_LEPBJ Length = 327 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 9/249 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 I + ++++A + + ++ + + S E L++ ++ YP Sbjct: 20 IFKKLNSWANLNAYLERFLPSSVLRGALYAS------EKISNDLKKTGFSVLSFFDPEYP 73 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT-ITS 142 L D P LF +G L+ L AVVG+R S L L G + + S Sbjct: 74 SLLKEIYDPPLILFYKGNLNILDLSFAAVVGTRNPSPISCYAAELIPYYLKENGFSGVVS 133 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL-LEQGGALVSEFPLDV 201 G A+GID + AAL I V+G G T +P + +L + + +++E+P Sbjct: 134 GFAKGIDATSMNAALDEELAVIGVMGTGPETEYPFENRKLYQRMKYAKRTLILTEYPPGQ 193 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 L Y FP+RNRI++G+ V ++EA +SG++ +A ALEQ R +F ++G Sbjct: 194 KILKYTFPKRNRIVTGMCNSVFIMEAPEKSGAISSAHNALEQNRNIFIF-SDPRQTKNQG 252 Query: 262 PHWLIKQGA 270 LI+ GA Sbjct: 253 GEILIRDGA 261 >UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_NITWN Length = 302 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 12/265 (4%) Query: 28 VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW-LEQPNHHLIPADSEFYPPQL 86 + + + + R S+ ++ + A YP +L Sbjct: 35 FKSIADLFSKQEGAVPSDFVERSRASSYANDVHARLKDAGIKSYGVRVHGAGD--YPERL 92 Query: 87 LATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 L+ +G ++S +AVVG+R S G R ++L TI SGLA Sbjct: 93 RVADHPIELLYFQGWWELVNSPRSVAVVGTRKPSAEGLARTRRLVKSLLQDDFTIVSGLA 152 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 G+D AH AA+++ G +IAVLG L+ +P +A+L + E L+S+ P+ Sbjct: 153 AGVDTAAHTAAIELGGRTIAVLGTPLSKSYPASNAKLQQQIAEHH-LLISQVPVKRYSNQ 211 Query: 206 YN-------FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 N FP RN +S L+ ++VEA SG+LV AR AL+QGR+VF L NP Sbjct: 212 KNPTSNNFFFPERNITMSALTDATIIVEAGETSGTLVQARHALKQGRKVFILESNFRNPE 271 Query: 259 SEGPHWLIKQGAILVTEPEEILENL 283 + PH ++GAI V + ++I ++ Sbjct: 272 LKWPHTFEERGAIRVADYDDIRRHI 296 >UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCN7_LEPBA Length = 308 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 10/258 (3%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 +I ++ + + +R+L + PN L+ Sbjct: 16 RKTKIWRSYNSFPNLYNDLPKF--FVKEDWERWLFEC-----QIWEKNKDPNWQLVHFYD 68 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT-RGV 138 E YP L D P L G+L +A+VG+R S + ++LA + Sbjct: 69 ESYPQLLKEIYDPPLVLVCLGDLSVFQRELVAIVGTRKSSPISLVATKALVQSLAKKEKM 128 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL-EQGGALVSEF 197 I SGLA GID A +AL + + VLG L +P + L + + L+SEF Sbjct: 129 AIVSGLALGIDRQAFVSALDLGVPVLGVLGTTLGMEYPPGNRDLYKRIKSDTKQLLISEF 188 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 + P + FP+RNR+ISGL + V ++E+ +SG++ TA A+EQ RE+F P Sbjct: 189 LMQTEPAKWTFPKRNRVISGLCQKVYILESGKKSGTISTATSAMEQNREIFVFDHP-HQF 247 Query: 258 GSEGPHWLIKQGAILVTE 275 +EG L++QGA L+T Sbjct: 248 DNEGGKMLLRQGAGLLTG 265 >UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G5K2_PROM2 Length = 311 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 131/243 (53%), Gaps = 5/243 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 L L+SI + ++ + +I + ++ ++ A+ + + K +E L Sbjct: 9 LTLLSIDGFGLVNSYKLLSSLESIRTDNIIEALNRKKDFSISSAE-WFAKKDKFLEK-LD 66 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGER 124 ++ IP S YP L+ D+P +FV+G+ +L LA+VG+R + Y Sbjct: 67 KSQEQKISAIPFTSNDYPKALMELNDFPLVIFVKGKSESLNFQNTLAIVGTRNPTKYTYD 126 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 C A+R ++ SGLA G D +AHKAA+++ ++AVL NGL+ I+P+ +A LA+ Sbjct: 127 NAPEICNIFASRSQSVISGLAIGCDSIAHKAAIKMGIPTVAVLPNGLDEIYPKENANLAS 186 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 +++ GG LVSE+ + + P Y F R+RI +GLS+ L++E++ + GS+ R + Sbjct: 187 EIIDYGGCLVSEYLIGIKPSRYQFVARDRIQAGLSRVGLLLESSSKGGSMHCIRKLEKLR 246 Query: 245 REV 247 R+V Sbjct: 247 RKV 249 >UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH66_SEBTE Length = 234 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 6/234 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSH-IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W+ L + +++ I L+ L + L Sbjct: 3 WINLREF-GIKDSLILKFMKEFKSFESFIRDENLRI--LDRDIRAKVLLAALHDNRKFYE 59 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 L++ N L+ S+ YP L D P L+V G++ + VVG+R ++ YG+ Sbjct: 60 KLQESNIRLLEYTSDDYPENLRNIQDPPLFLYVAGKIKF-GERNIGVVGTRRNTIYGKVS 118 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + L V I SGLA GID +AH+ L+ N I V+G+GL+ I P +L Sbjct: 119 CESILKELLEYDVNIVSGLALGIDTIAHEFTLKKNCCCIGVVGSGLDKIFPYESRKLWER 178 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + E G L+SE+P PL +NFPRRNRII+GLS+G+L+ E+ + G LV +R Sbjct: 179 IPE-NGMLISEYPPGSEPLKWNFPRRNRIIAGLSQGILLCESYEKGGGLVNSRF 231 >UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_RHOFA Length = 293 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 9/288 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + W L ++ +V +A ++ V + S+ E Sbjct: 4 RERVAWAYLAHVAR-GQGSLVHLAVSLSGVEAAAEAVRHREVSEDLLRATARSWDYSGAE 62 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDY----PGALFVEGE--LHALHSFQLAVVGS 115 + L L+ +P +L P AL+V G+ L +A+ G+ Sbjct: 63 ADLETAATLGARLVTPADAEWPQRLRMAGWLEGSTPVALWVRGQGALPGADVSAVALTGT 122 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 RA + YGE F LA RGV + SG GI+G +AAL V +AV+ GL+ + Sbjct: 123 RAATAYGEHVASEFAGDLAMRGVAVLSGSGFGIEGAVLRAALGVGAGPVAVMPCGLDRAY 182 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P HARL + EQ G +VSE+ P F +++ LS V+V EA R +L Sbjct: 183 PSGHARLLERVAEQ-GVVVSEYSFGAEPRRERFNGSGALLAALSDAVVVPEAGSRGRALS 241 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILEN 282 AR GR V+A+PGP+ + S G H LI G A L + + Sbjct: 242 VAREVHRLGRAVYAVPGPVTSAASNGCHTLIIDGVARLAMSAAGVCAD 289 >UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKC9_BDEBA Length = 315 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 3/270 (1%) Query: 27 WVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL 86 ++ + + + L + +K E SL L+ + + YP Sbjct: 36 RLSADQVLTGLRFRWPELGEAMTKN-HELFKKHCEESLQ-LKMQGVNFVVYGEVLYPELC 93 Query: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE-RWGRLFCETLATRGVTITSGLA 145 D P L G L++ L+VVGSR + + + I SG A Sbjct: 94 YQMADPPLTLSYRGSPAWLNARTLSVVGSREPAADSLLWMEKELGLFCEQQRPCIVSGGA 153 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 RG+D AH AL+ ++ VL +GL I+P ++EQGG +SE+ Sbjct: 154 RGVDQKAHSVALRKFCPTVVVLPSGLGEIYPANLKEWMGLVIEQGGCFLSEYDHQQKMHK 213 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 + F RNR+I+ L + L+VEA RSG+L+TA A + GR V+ +PG +P +G L Sbjct: 214 HLFHHRNRLIAALGRASLLVEARRRSGTLITAHQAAQIGRPVWVVPGHPLDPHFQGALDL 273 Query: 266 IKQGAILVTEPEEILENLQFGLHWLPDAPE 295 + GA V + +++L Q +P Sbjct: 274 LMDGAQSVRDAQDLLMFFQSETAGEQISPA 303 >UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU Length = 315 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 4/292 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 L + ++ L G + +++ + + I L+ +R P + Sbjct: 4 LLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVELQEK 63 Query: 67 -LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 +++ + S+ YP +L D P A++ +G L AVVGSR S Sbjct: 64 VIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTLAER 123 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 R F LA GV I SG A G D AH AA+ N + AV+ ++ I+PR++ + + Sbjct: 124 TREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQNRKYVSK 183 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 LLEQGG +++E Y F +RNR++SGLS + + A L+SG+L+TA L+ G Sbjct: 184 LLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLDLGL 243 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 +V+ +G L GA + +++ L + ++S Sbjct: 244 DVYVYDLDFCG---DGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDS 292 >UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GA6_9NOCA Length = 301 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 10/282 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 LRL + ++ + + D Q R + + E+ L Sbjct: 10 ALLRLRPQKLTWSALTEKVLDAGSARIVFDDYFPPQLIDDPRVSAAWA-----QAEADLQ 64 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + +P +L P LF +G L +VVGSR S GE + Sbjct: 65 TWHDEGLEFLSVLDPMFPRRLHDIMQTPPFLFAQGHLVP-DDQGFSVVGSRKASPEGEGF 123 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 R LA G+T+ SG+A GID AH+AAL V G ++A + G+N +P ++ L S Sbjct: 124 AREIATYLAGEGLTVVSGMAAGIDTAAHQAALAVGGRTVAFVATGVNRTYPAQNRHLHES 183 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + + G ++S+F D PP + F RN ++SG ++VEA SG+ AR A+E GR Sbjct: 184 IAD-LGLVLSQFWPDAPPQKHTFLMRNALMSGYGLASIIVEAGETSGARAQARMAVEHGR 242 Query: 246 EVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFG 286 V + + LI+Q G L T+ +I + Sbjct: 243 PVILTESVV--ARNHWAKTLIQQRGVHLATDMTDIDRLVTQI 282 >UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8G0_COPPD Length = 257 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +V G + +VG+R S YG R + A+ G + SGLA GID AH+ A Sbjct: 29 YVRGNSIPPLEKTVGIVGTRHASSYGLRVAYELGKYYASEGYVVVSGLAYGIDQKAHEGA 88 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L+ G ++ VLG+GL+ +P+ L + E+ G +++ + D P F RN +I+ Sbjct: 89 LER-GTTVGVLGHGLDFHYPKSTLLLRKRI-EEKGFVITWYKPDQGPRKAFFRERNWLIA 146 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE- 275 LS ++VVEA +SG+L+TA AL+ G+EV A+PG I + G + LI GA + Sbjct: 147 ALSDFIVVVEAPAKSGALITASFALQMGKEVKAVPGDIDRDSAMGSNMLIFDGAEPILAI 206 Query: 276 PEEILENLQ 284 P++ + + Sbjct: 207 PKDTDQQFR 215 >UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UP33_METS3 Length = 312 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 136/311 (43%), Gaps = 11/311 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMV-RIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M+ + L L I+ + + + + +D + + + + ++ L + Sbjct: 1 MIKYKELLFLNKINRVGKVTIYTKYWDMLINSKDMDDLFNKLHK-SNKISEDKLIKAKNE 59 Query: 60 IESSLCWL-EQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALHSFQLAVVGSRA 117 E + ++I + YP +L + P L+V+G + AL +A++G+R Sbjct: 60 AEKIYDSVVNDSEINVITVFDKEYPKKLFDMENQKPLYLYVKGSMDALSKSNIAIIGTRK 119 Query: 118 HSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S E + + + + + SGLA G D +AH+ + N ++IA L GLN I P Sbjct: 120 PSNNTEIFEKKLVKRILDVSKRVVVSGLALGCDKIAHETTVNENKITIAFLPCGLNVISP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +LA S++EQGG LVSE+ D ++ R++I++ S V V++ +SG++ T Sbjct: 180 SSNKKLAKSIIEQGGCLVSEYEPDKKVFKRSYVERDKIVAAFSDIVFVLQCGEKSGTMHT 239 Query: 237 ARCALEQ----GREVFA-LPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 ++ R+++ LP + + G ++K V++ +E E + Sbjct: 240 VNATIDFKKVNHRDLYVYLPEDMSDGDYSGNISILKSNNGTKVSDIDEFCEEIVILEKDN 299 Query: 291 PDAPENSFYSP 301 + S Sbjct: 300 NLNKNADYQSK 310 >UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=A2CBT1_PROM3 Length = 378 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 98/372 (26%), Positives = 155/372 (41%), Gaps = 15/372 (4%) Query: 3 DTEIWLRL-MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI- 60 + W L + M + A + LR+ + + K + Sbjct: 8 ERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLG 67 Query: 61 --ESSLCWLEQPNH--HLIPADSEFYPPQLLATTDYPGALFVEGELHALH----SFQLAV 112 S + ++ +P L A P ALF +G L +A+ Sbjct: 68 LHRSKWGTCPSVDVPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAI 127 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S +G R LA G + SGLA GID AH+ L+ G + VLG L Sbjct: 128 VGTRRPSNHGLRVAEALGRALALAGWPVISGLAEGIDAAAHRGCLEGGGAPVGVLGTPLQ 187 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++PR++ L +L+ G LV+E P + F RNR++ L+K V+VVE RSG Sbjct: 188 KVYPRQNEGL-QALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVECPERSG 246 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ---FGLHW 289 +L+TAR A+EQ ++ +PG + G + L+ A + PE +++ L +H Sbjct: 247 ALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHS 306 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 A + S + LL +GD ++ + + QLL+LEL G Sbjct: 307 PSVAFDLSGSRSSSRAGQHGDTALLQAIGDGA-SLEDLMTGLNLSSARLTEQLLQLELKG 365 Query: 350 WIAAVPGGYVRL 361 + A PG + RL Sbjct: 366 VVVAEPGLHWRL 377 >UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetales RepID=C4RB86_9ACTO Length = 345 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 130/300 (43%), Gaps = 7/300 (2%) Query: 3 DTEIWLRLMSISSLYGD-DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + + L+ L + + +V + L R + ++ Sbjct: 48 ERAALVALLRQPDLSWSDTTHEVQEAGTALGVLTRLVGRADTLFPDT--RSVDSLIEAAA 105 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + + E YP QL + P LF G L +AVVGSR S Sbjct: 106 GDLLAWQAEGVAVRAFFDEDYPAQLRDIREMPPLLFARGSLRPDP-RAIAVVGSREASDR 164 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G +LA+RGVT+ SGLA+GID AH+AAL G ++AV+G G+ +P + Sbjct: 165 GLEVAGSVATSLASRGVTVVSGLAKGIDTAAHEAALAAGGRTVAVIGTGIRRHYPAANQA 224 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + E G ++S+F D P +FP RN ++SG + +VVEA RSG+ + AR AL Sbjct: 225 LQEHIAE-VGLVISQFWPDAAPTKQSFPMRNAVMSGYAAATVVVEAGERSGARIQARLAL 283 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR V L G + + G + E++E + L +P APE + Sbjct: 284 QHGRPV-VLTGQVMRHEWARSFA-DRPGVHVARGTVELMEAVDAILDRVPTAPELEGFPE 341 >UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacillus cereus G9842 RepID=B7IYS3_BACC2 Length = 290 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 20/289 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTL--------RQAQ 50 M E+ L + + + ++ ++ H+ + +L Sbjct: 1 MNIKEMIFVLYDL-GISLATLSKLYRESNEEQLNHLLEGDFLELQFSLGVFNDNELELLS 59 Query: 51 RF--LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 + + +I L + YP L + P +F++G L + Sbjct: 60 SIDSIQKSKSNISKILSEFSDEKIEYFIYYEDGYPTSLKSIPSPPFFIFMKGNRSLLENK 119 Query: 109 QLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + +VG+R + + + + + + I SGLA G D AHK L NG +IAVL Sbjct: 120 FICSIVGTRNPTDQTLKQIDSTVQEMVSTDIVIASGLALGTDIHAHKCTLDSNGKTIAVL 179 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFP-LDVPPLAYNFPRRNRIISGLSKGVLVVE 226 + ++ + P+ H A +L + G L+SE+ + N+ RNRIISGLS V++ E Sbjct: 180 PSPIDDVTPKSHKPYANEILAKDGLLISEYYKSETVFKKTNYIHRNRIISGLSNAVIIAE 239 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 + +SG++ TAR A +Q R ++ + S G ++ + + Sbjct: 240 CSEKSGTMHTARYAYKQKRPLYC-----FDNKSTGVLKILSSNSARIYT 283 >UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWE1_9GAMM Length = 313 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 14/261 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRI-AHW--VAKQSHIDAVVLQQTGLTLRQ----------A 49 + L L I + + + +I DA + ++ + Sbjct: 11 EKLALLALSEIRGVGFETIKKISLDQIPFTTFFQSDAGQHYKPHISSNATYSKIKEYLAS 70 Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 R ++ + + +L+ +I + +P +L D P +F+EG AL F Sbjct: 71 SRSINDALDLAKRNFDYLQNRQISIILPGEDRFPKKLHDLNDMPQWIFIEGASEALIGFS 130 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + VGSR S G+ F L +T SGLA GID + H+A++ + ++AVLG Sbjct: 131 VTAVGSRKPSAEGKWLANYFGLCLQDLKLTTISGLAEGIDQIVHRASISAHLPTVAVLGT 190 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G+ + +P+ L +LE GGALV+E+ A NF RRNR+ + L + +E + Sbjct: 191 GILSDYPKGSQELRGRILENGGALVTEYLPRDTFSAKNFVRRNRLQAALGDIIFPIEWQI 250 Query: 230 RSGSLVTARCALEQGRE-VFA 249 +SG+ T + A E R +F Sbjct: 251 KSGTAHTVKFAREMHRPMIFC 271 >UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococcaceae RepID=C8LVU3_STAAU Length = 178 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 LAVVG+R + Y ++ ++ +TI SGLA+G D +AH+ AL+ N +IAVL Sbjct: 2 HHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVL 61 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G T +P+ L + E+ G ++SE+P P Y F RNRIISGLSKGVL+ EA Sbjct: 62 AFGHQTHYPKSTLALRNKI-EEKGLVISEYPPHTPIAKYRFSERNRIISGLSKGVLITEA 120 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +SGS +T ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 121 KEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 176 >UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR87_BIFLI Length = 336 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 7/244 (2%) Query: 47 RQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH 106 R L + + E+ + + YP +L D P LF EG + Sbjct: 75 RARAAELESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRMVQ-D 133 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++VVGSR ++ + L + G + +GLA GID AH AL+ G ++A Sbjct: 134 ELGVSVVGSRKADAESLKFAQDTASMLVSCGFAVIAGLASGIDTAAHVRALEEGGRTVAF 193 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 +G G+ +PR + L + + G ++S+F D P Y FP RN +SG +VV+ Sbjct: 194 IGTGITKRYPRENGTLQDRI-GRDGLVLSQFWPDQGPTKYTFPMRNASMSGYGVATVVVQ 252 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 A+ SG+ + AR A + GR V + + ++G W K + +++++ Sbjct: 253 ASEHSGTRIQARQAQQHGRPVI-----LRDTVADGTEWGRKLASRPGVCVASTVDDVKAR 307 Query: 287 LHWL 290 LH L Sbjct: 308 LHDL 311 >UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae RepID=B9LA92_NAUPA Length = 235 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 45/265 (16%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 L+ +G L L+ ++A+VGSR S Y + ++ + L+ + I SG A GID AH+ Sbjct: 13 LYYKGNLELLNKPKIAIVGSRRASKYSKDITKILAKRLSQK-YVIVSGGALGIDKAAHEG 71 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 A +I V + L+ I+P+ + L ++ E A +SE+ ++ P + F +RNRII Sbjct: 72 AYPN---TIFVSPSSLDIIYPKSNKSLIQNIYENPLA-ISEYEMNFAPFKHTFLQRNRII 127 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVT 274 +S V++ EA ++SGS+ + A E G++V+ LP I S G L K+ A ++ Sbjct: 128 VKISNLVIIAEANIKSGSMRSFEWAKEYGKKVYVLPHRIN--ESSGTRHLAKENMAEVIW 185 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 + +E ENL ++ L E L G Sbjct: 186 DIDEFCENLGI----------------EKNTNILTLNEALQKYG---------------- 213 Query: 335 VPEVVTQLLELELAGWIAAVPGGYV 359 + L E+EL G + G Sbjct: 214 -----STLYEMELEGKVEIKNGKVY 233 >UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KR12_9BACE Length = 309 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 120/311 (38%), Gaps = 35/311 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 M + E W + ++ W + LQ G + +Q + R Sbjct: 1 MKNREDW------KEVVKKRQNKMEAWRLSFLSVEELL--CLQLLGYSSKQLYENVESER 52 Query: 58 --------------KSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGEL 102 + L + IP + E YP D P + V G Sbjct: 53 YSLKETASMSIRELDKAKRILDRQTKAGVITIPYNDEAYPHHFRNLCRDAPLLIHVLGNK 112 Query: 103 HALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L+ +A++G+RA G F E + +G + SGLA G D AH+ L G Sbjct: 113 DLLNREDNVAIIGARAADKEGLNMAYEFAEQMGKQGHIVISGLALGCDTAAHQGCLDAGG 172 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +IAV+ +GL+ HP+ + L ++ +GG ++SE P V R R+ L++ Sbjct: 173 QTIAVVASGLDITHPKVNKSLQDEIIAKGGTILSEHPFGVKANPTRLVARCRMQVVLTQS 232 Query: 222 VLVVEAALRSGSLVTARCALEQG-------REVFALPGPIGNPGSEGPHWLIKQG-AILV 273 V+V + + SG++ R A E V+++ N + G +L+ A+ + Sbjct: 233 VIVAQCPIISGTMYAVRFAQEYNGVPFGWENNVYSVQYDTQNELNSGNKFLLDYNLALPI 292 Query: 274 TEPEEILENLQ 284 +EI +L Sbjct: 293 RLGQEITLDLD 303 >UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacterium RepID=UPI0001BC4767 Length = 309 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 19/255 (7%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR----FLSFPRKSIE 61 RL+ S L ++ RI + + + ++ T ++ ++ F R+ I+ Sbjct: 25 FLYRLIKQSILENKNLFRI-----SEEELFQFICEEQLYTRKEYEKVLILIEDFFREEIQ 79 Query: 62 SSLCW----LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH--ALHSFQLAVVGS 115 + ++ +IP E YP L + P L+++G+L + +A+VGS Sbjct: 80 EEISNIETICKKEEIEMIPYGEENYPFPLKNIRNSPYVLYLKGKLPQTEILKKSVALVGS 139 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-I 174 R S G+ + + + L + SGLA+GID + H L G + A+LG GL I Sbjct: 140 RDCSEEGKNFAKKVAQYLKKNKIYNISGLAKGIDSIGHLETL---GQTGAILGQGLAREI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA+ +L GG L+SE P P + RNR+ SGL+ G+++ E+AL+ G+L Sbjct: 197 YPRENQILASRILNMGGFLLSELPPLTPVSMEHLIARNRLQSGLTSGIIIAESALQGGTL 256 Query: 235 VTARCALEQGREVFA 249 T R A EQG++++ Sbjct: 257 HTFRFAREQGKKIYV 271 >UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteobacteria RepID=A6Q7E6_SULNB Length = 258 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 11/250 (4%) Query: 82 YP-PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 +P P+L + YP LF +G+L L ++++VG+R S Y + + + L RGV I Sbjct: 7 FPIPELESMKKYPPELFYKGDLSLLKRPKVSIVGTRMPSNYTREYTYMLAKALTKRGVCI 66 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 SG A G+DG+AH+ A N +IAV+GNGL+ +P HA++ ++ E G ++S+F Sbjct: 67 VSGAAMGVDGIAHEGAGFEN--TIAVVGNGLDIRYPVVHAKMIEAI-ESNGLMLSQFNDG 123 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 ++F RN ++ L ++V EA L+SGS+ + AL+ G+E+F LP +G S Sbjct: 124 FRATGWSFVVRNELVVALGDVLVVTEADLKSGSMRSVEFALKMGKEIFVLPHRLG--ESM 181 Query: 261 GPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPE----NSFYSPDQQDVALPFPELLA 315 G + L++ + A + + E + + E Q V + Sbjct: 182 GTNALLQEEKATAIMDIEAFASRFGRAVESEVEKDEFFYFCQSMPTFDQTVEKFGERVYE 241 Query: 316 NVGDEVTPVD 325 D + ++ Sbjct: 242 AELDGIISIE 251 >UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium RepID=C3WS18_9FUSO Length = 314 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTG--------LTLRQA 49 M E L I+S Y + + + + +I+ L + + Sbjct: 11 MYSKEELLIFSFINSNYDISIQNLTYKIFNFSNKENINFFKLNRIEKIEFLKSFFSENNM 70 Query: 50 QRFLSFPRK------SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 ++ L+ + +E + E+ N + E YP L+ + P +FV+G L Sbjct: 71 EKILNIFDRINLYKIEVEKIIKNCEEKNIKIFYYSYENYPKNLINIKESPYIIFVKGNLP 130 Query: 104 ALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 A+VG+R S G + L+ + SGLA GID V H +LQ Sbjct: 131 IDEELEKSFAIVGTRKPSKEGINFAGDIGSYLSKNNIYNISGLALGIDTVGHNMSLQ--- 187 Query: 162 VSIAVLGNGLN-TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 + A+LG GL+ I+PR + +LA +LE G L+SE ++ +R+R+ S L+ Sbjct: 188 KTGAILGQGLDLEIYPRENIKLAEMILENNGFLLSELIPQTEISLFSLIKRDRLQSALTS 247 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVF 248 G+++ E ++SG++ T + A EQ +++F Sbjct: 248 GIIIAETGIKSGTVNTFKYAREQKKKIF 275 >UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter RepID=C3XNA9_9HELI Length = 267 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 22/276 (7%) Query: 83 PPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITS 142 PP L + L+ G L L + ++ ++G+R + Y + + + + L+ G+ I S Sbjct: 9 PPSLTHIKEL-ETLYYCGNLGLLKAPKVTIIGTRNPNPYAQSFTQTLAQKLSKYGIVIVS 67 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G A GID +AH AL +I + + L+ I+P+ +A + + + +Q G ++S+F Sbjct: 68 GGALGIDIIAHANALPN---TIMISPSSLDYIYPKSNAPIISKIYKQ-GLILSQFTPTYT 123 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 P Y+F RN+I+ L + V++ +A L+SGS+ +A+ AL G+ +F P +G S G Sbjct: 124 PHRYSFLERNKIVISLGECVIIPQADLKSGSMQSAQYALSLGKTIFVPPHHLG--QSLGT 181 Query: 263 HWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEV 321 L K A ++ + + + L + P D +D L F + + Sbjct: 182 QSLAKNNQARVIWDIDVFVNELCASILDSNITPNLRASLRDSRDEILEFCQSNPFFEEAF 241 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 L E EL G I G Sbjct: 242 LRFGE--------------MLFEYELEGKIRRNNGR 263 >UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FRD0_SORC5 Length = 350 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 93/346 (26%), Positives = 135/346 (39%), Gaps = 33/346 (9%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT----TDYPGALFVEGE 101 R A + R S +S+ + I YP QL A P L++ G Sbjct: 5 ARHAAVLVLISRNSSRASVDRPRMASIE-IQPADPSYPAQLWALVTETEAAPPTLYLRGA 63 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L A +A+VG+RA S R+ R L G +I SG ARG+D AH+ AL Sbjct: 64 LPAC--PGVAIVGTRAASDEALRFTRALAAALGEAGFSIWSGGARGVDAAAHEGALDARA 121 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 ++ V G G +PR HA L A +L GGAL++ P D PPL F +RN +++ L+ Sbjct: 122 PTVVVGGGGHAHPYPREHAALFARVLAAGGALLARVPDDTPPLPALFLQRNAVLAALTLA 181 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 +VVEA + SG+ A A GR + +P +P G + GA +T ++++ Sbjct: 182 TVVVEAGVESGARSAAAAARRLGRHLCVVPHAPWSPRGVGCALELVSGARPITRAADVID 241 Query: 282 NLQFGLHWLPDAPEN--------------------------SFYSPDQQDVALPFPELLA 315 L + ++ +L Sbjct: 242 VLGGQAPPPRRRARRSARSRSPGGGTLPLPEAALGARTGVLPEENGPPPSMSAAERAVLD 301 Query: 316 NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + VD V ER G P V LL L L + P G R Sbjct: 302 ALDARPAHVDEVCERTGLPPRRAVEALLTLTLQAVVVEGPAGLFRR 347 >UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter RepID=Q1CUG8_HELPH Length = 266 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 30/278 (10%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGV 138 E P D P L+ G+ L + ++A++G+R + Y ++ LA Sbjct: 11 ENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNRA 70 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 I SG A G+D +A + AL +I + L+ I+P + ++ + Q G ++SE+ Sbjct: 71 VIVSGGALGVDIIAQENALP---KTIMLSPCSLDLIYPTNNHKVIQEI-AQNGLILSEYE 126 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 D P+ +F RNR++ LS V++ +A L+SGS+ +AR A + + +F LP + Sbjct: 127 KDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--E 184 Query: 259 SEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV 317 S+G + L+++G A + + + L H L + PE + + E Sbjct: 185 SDGTNELLEKGQAQGIFNIQNFINTLLKDYH-LKEMPEMKDEFLEYCAKNPSYEEAYLKF 243 Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 GD+ LLE EL G I + Sbjct: 244 GDK---------------------LLEYELLGKIKRIN 260 >UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepID=A4X0S0_RHOS5 Length = 226 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 4/201 (1%) Query: 90 TDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 + P AL++ G+ L + +AVVGSR S GE+ R L +G+T+ SGLA GI Sbjct: 20 KNAPEALYMAGDAALLKTGTRVAVVGSRKSSENGEKRARALVRALVEQGITVVSGLAEGI 79 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D VAH+ A++ G +IAVLG L+ +P ++ RL ++++ +S+FP P NF Sbjct: 80 DTVAHETAIEAGGRTIAVLGTPLSQAYPAKNRRLLD-IIKKDHLAISQFPEGYPTKGENF 138 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 PRRNR ++ + +VVEA +SG+ A+ GR V+ L + PG P LI Sbjct: 139 PRRNRTMALICDATIVVEAGEKSGTRHQGWEAIRLGRLVYLLENVVNKPGMTWPKELIAY 198 Query: 269 GAILVTEPEEILENLQFGLHW 289 GA ++ E L+NL++ + Sbjct: 199 GAQVLR--REDLDNLKYDIPN 217 >UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNH8_FIBSS Length = 282 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 8/212 (3%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 ++ + E +P LL G + +G L L + ++VVGSR S G+ + L Sbjct: 68 VLFKNDERFPKGLLNVKYPLGMFYYKGNLDLLKNVCVSVVGSRHVSPKGKIRTEKLIKEL 127 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 TI SGLA+G+D A A+ + I V+G ++ +P+ + L + L Sbjct: 128 -HSNTTIVSGLAKGVDTAALTTAISLGKKVIGVIGTPIDHYYPKENKELQDEI-ATNHLL 185 Query: 194 VSEFPL------DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 +S+ PL FP RN +++ +S ++VEA+ SG+ A+ + G+++ Sbjct: 186 ISQVPLYKYDKQSFVTKKMYFPERNVVMAAISDATIIVEASETSGTHSQAKACFDLGKKL 245 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 F L N P +++GA+ V +I Sbjct: 246 FILNSCFENHEITWPTKYLEKGAVRVRAITDI 277 >UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A7I0D6_CAMHC Length = 268 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 22/263 (8%) Query: 90 TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 + P L+ G L L+ ++A+VGSR S Y + L RG+ + SG A G D Sbjct: 19 KNAPKKLYYCGNLMLLNMPKIAIVGSRKMSVYTKNLIIKTACELKNRGICVVSGGAIGCD 78 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 A KAA +I + NGL+ I+P+ ++ + + A +SE+ + F Sbjct: 79 IAAQKAAFP---YTIGIFANGLDIIYPKENSEQISKIYSDALA-ISEYENGTCAQRWQFL 134 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNRI+ +S V++ +A L+SGSL +A+ AL G +F P I S G + L+ + Sbjct: 135 ERNRIVVAISSAVIIAQADLKSGSLNSAKTALNLGIPIFTFPHRID--ESRGTNMLLAEK 192 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 + +++++ L + + +D L F + ++ + + Sbjct: 193 KAFL--IDDVMKFADKICDKLGVQNFQTSLNSVPKDEILEFVKYNNDLNSALLKFGDLI- 249 Query: 330 RAGQPVPEVVTQLLELELAGWIA 352 E ELAG I Sbjct: 250 -------------YEYELAGKIE 259 >UniRef50_UPI000169347A DNA processing protein DprA, putative n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169347A Length = 198 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 4/193 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRK 58 + + L + + + + + + L Q GLT +QA FL+ K Sbjct: 6 DKRLMLIALNETPGIGMKTIAMLHQKLDDLTVLQTCTQKELIQLGLTEKQASSFLAIQNK 65 Query: 59 SI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I + L + E+ + ++ YP L P L+ G+L L + +VG+R Sbjct: 66 GIIDKRLAFYEKQDIQILTVADPDYPNMLKQIYQPPWVLYAIGDLSILGLPMIGIVGTRK 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ +L RG+ I SG+ARGID AH+ ALQV G ++AVLG + I+P Sbjct: 126 KNPYGKKVTEQLAASLVQRGIGIVSGMARGIDSSAHRGALQVKGKTVAVLGGPADKIYPP 185 Query: 178 RHARLAASLLEQG 190 + +L + E G Sbjct: 186 ENGQLYRQIAESG 198 >UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVL8_METMJ Length = 314 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 104/265 (39%), Gaps = 14/265 (5%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW------------LEQPNH 72 A + + + + + + + E Q Sbjct: 27 AEYFRDPAVLRDLYADTFEPGAKPRRAYPGPLIARAEEIREKGLLAFYIDTLTGYRQKGV 86 Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++P YP +LL D P L+ G L +AVVG+R S G R + Sbjct: 87 RILPVFDAGYPGRLLGIRDPPFLLYQVGREETLAKPAVAVVGTRTISRAGIERARETVDL 146 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 L G + SGLA G D AH AA+ G ++AVL + + P + LAAS+ G+ Sbjct: 147 LVRLGYVVVSGLALGTDACAHTAAIDCGGETVAVLPGDVTVVVPGENRTLAASI-AGSGS 205 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL-P 251 L+ E F RNRI SGLS GV+V+E GS+ A A QGR V+ L P Sbjct: 206 LLGEITHLAGMHKGRFLERNRITSGLSDGVVVIETGKSGGSVRQAETAFRQGRPVYVLEP 265 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEP 276 G L+ GAI V P Sbjct: 266 DCSDAKAVAGYQHLVSCGAIPVESP 290 >UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FFG5_9BIFI Length = 461 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 93/361 (25%), Positives = 128/361 (35%), Gaps = 54/361 (14%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLATTD-----YPGALFVE 99 R P W +I +P QL + P L+ Sbjct: 83 DGWHARLDCLPSLDWHGLEDWFTMDGSQWIIGPQDGAWPAQLEDLSTHKDWAAPLCLWGV 142 Query: 100 GELHALHSFQ--LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G + AL S +AVVGSR + YG R A G I SG A G D AH AL Sbjct: 143 GSMAALTSCPSPVAVVGSRGVTDYGRTVAREVALRAAADGHLIVSGGAMGADAAAHWGAL 202 Query: 158 QV--------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 G ++AV GLN I P + RL ++ GGALVSE + P A F Sbjct: 203 DALRQRGLDAAGRTVAVFAGGLNHIGPSSNLRLFEAIRANGGALVSEMCPNTIPEARRFL 262 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNRII+ L+ V+V +A LRSG+L TA + R V A+PG I P + G + LI Q Sbjct: 263 LRNRIIAALASTVVVAQARLRSGALNTAGWGNDLNRVVLAVPGDITVPHNAGCNRLIAQS 322 Query: 270 AILVTEPEEILENLQFGLHWLPDAPE---------------------NSFYSPDQQDVAL 308 ++ + H E + + + Sbjct: 323 ESIILTRTSGIGEFCHAPHEPQALYEVTSETTSFSTGCARTGGICADSDASKSAEHVITP 382 Query: 309 PFPELLANV-----GDEVTPVDVVAERAGQPVPE------------VVTQLLELELAGWI 351 L+A + D + G+ PE V+ + LE G + Sbjct: 383 SQQALIAAIRSCNRQHIRATPDALLAAVGKTAPETSGQKPMAGIGQVMADIGTLEARGLL 442 Query: 352 A 352 Sbjct: 443 R 443 >UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagibacter ubique HTCC1002 RepID=Q1UZN8_PELUB Length = 306 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 129/295 (43%), Gaps = 27/295 (9%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES----S 63 L L I +L + ++ + ++D L Q ++ + I Sbjct: 18 LALSKIKNLGKKRIFKLIFKIK---YLDEYSLSQLFDEFELYKKITKGDFEQIYQDSISE 74 Query: 64 LCWLEQPNHHL--IPADSE-------FYPPQLLATTDYPGALFV--EGELHALHSFQLA- 111 L ++ N + I + E + + T ++P LF+ + +L + Sbjct: 75 LDKMKSSNIKIYNIFENDEIGLFKDGLFSKNKIPTDEFPNQLFLINKSDLVIDSFKNIFT 134 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++G+R +S + L + I SGLARGID +AH+ ++++GV+IA+L NGL Sbjct: 135 IIGTRNNSAEAKDITEKVVTFLCDKQSIIISGLARGIDTIAHQKVIELDGVAIAILANGL 194 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 +TI+P + LA ++L G L++E+ + + R+RI + L+ ++++E+ ++ Sbjct: 195 DTIYPSENRELAKNIL-NKGILLTEYTFGLKAEKFRLIERDRIQAMLANDIVLIESDIKG 253 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK--QGAILVTEPEEILENLQ 284 GS+ + A + + ++ + + G ++ I + EE + Sbjct: 254 GSMHAMKWAKKLNKRIWC-----FDMNASGNKEILNNYDNVIKFSNIEEFINKFN 303 >UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH Length = 281 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 22/276 (7%) Query: 2 VDTEIWL--RLMSISSLY------GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL 53 W L+ + + + + + I + + Sbjct: 7 DQKLAWYHAALILTKKVPVGSVTANNKLRDMLLNIGSFEDIYNQHFGMFPIEEKV----- 61 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAV 112 + S+ ++ + +I + YP +L + L+ G+L L+ ++ Sbjct: 62 ---ENQLNSAYSKID-FDFKVITINDPEYPEKLRSVEGATPVLYCRGDLSLLNADRTISF 117 Query: 113 VGSRA-HSWYGERWGRLFCETLATRGV-TITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R H+ R G L G I SGLA G D +AH+AAL+ +G +IAVLG Sbjct: 118 VGTRELHNPEHVRHGEAVISRLLNAGYQAIVSGLAAGSDTLAHQAALKYSGRTIAVLGTP 177 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL-SKGVLVVEAAL 229 L+ P+ + L + + L+SE+P+ + F RNR GL S GV+V A Sbjct: 178 LDQYFPKENRELQDEI-AKNHLLISEYPIGIRSFGSFFANRNRTTVGLSSDGVVVARAGD 236 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 RSG+ R +EQG++++AL I P + Sbjct: 237 RSGTQYAIRHCVEQGKQLYALENNIYEPEYQWVKKY 272 >UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vannielii SB RepID=A6UNG3_METVS Length = 352 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 5/223 (2%) Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--S 107 + + K + L+P +S YP +L D P L+ G Sbjct: 85 SKIKNKLFKRALEEYSMCIENKISLMPYESLNYPEKLRNIKDSPFLLYYIGNFPVEKDLE 144 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +A+VGSR E L+ + SGLA GID H ++ G + AVL Sbjct: 145 KSIAIVGSRDSVKLSEDISYNTAFELSKSKIWNISGLALGIDSFGHLGSIDSEGYTGAVL 204 Query: 168 GNGL-NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G GL + I P+ + L+ +L+ GG LVSE P R+R+ S L+ V VV+ Sbjct: 205 GQGLLDPIFPKENMELSEKILKMGGFLVSELPPSTKIDGIFLILRDRLQSALTDSVFVVQ 264 Query: 227 AALRSGSLVTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQ 268 + G+L T A+ Q + V+ P I + G EG L+ + Sbjct: 265 TGKKGGTLNTVNYAVNQSKTVYVFEPTEILD-GFEGNLILLNK 306 >UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding protein n=25 Tax=Enterobacteriaceae RepID=C2DIW6_ECOLX Length = 400 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 129/344 (37%), Gaps = 25/344 (7%) Query: 39 LQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGAL 96 ++ + L+ + + ++ ++ YP +L TD P L Sbjct: 62 WSDPRISQERILGLLARGHSLALA-VDKWQRAGLWILTRGDADYPVRLKNRLRTDAPPVL 120 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 F G L + +A+VGSR R+ + LA +G+ + SG ARGID A +A Sbjct: 121 FGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGICVISGGARGIDECAMASA 180 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L+V G ++ VL + L + L+ L+S F +V N RN+ I Sbjct: 181 LEVGGTAVGVLADSLLKT--STLVKWREGLIAGNLVLISPFYPEVRFTVGNAMARNKYIY 238 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL-VTE 275 L++ +VV A + G++ A AL+ + P + S L++ GA + Sbjct: 239 CLAESAMVVRAGMTGGTITGAMEALKHQWLPMQVK-PNQDMQSA-NSRLVENGASWSAEQ 296 Query: 276 PEEI------LENLQFGLHWLPDAPENSFYSPDQQ-----------DVALPFPELLANVG 318 E + + L + PE D D F LA + Sbjct: 297 AENVTIRLPDVPGLMYDRALRNAQPELFSLHEDDANYAVMPAHTPVDFYQLFVAELAILA 356 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 E ++ +A G + ++ L E G + + G+ + R Sbjct: 357 KESISIERLASCTGLTIEQISVWLNRAEEEGRVIRLGEGHYQFR 400 >UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative DNA processing protein n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZPT6_PSEU2 Length = 455 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 103/290 (35%), Gaps = 7/290 (2%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 A V + H + L + ++ L + L + ++ YP Sbjct: 46 ADLVTAEPHAVLEGWHDEKIPLLRIEQLLERGHALALA-LEKWSRAGLWVLTRSDADYPK 104 Query: 85 QLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITS 142 L P LF G L+ + VVG+R + + +A G+T+ S Sbjct: 105 ALKHHLRNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGMTVVS 164 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G ARG+D A + L G I ++ + L + + L+ LVS F + Sbjct: 165 GGARGVDEAAMQGGLNEEGTVIGIMADSLLSAALAS--KWRNGLMSNNLVLVSPFFPEAG 222 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 A N RN+ I LS+ +VV + R G+ A L++ + NP S G Sbjct: 223 FNAGNAMARNKYIYCLSQAAVVVRSETRGGTWNGAIENLKKAWVPLWVKRD-TNPES-GN 280 Query: 263 HWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 + L+ QGA + + ++ P++ D E Sbjct: 281 YALVSQGAQWLESAAKHVDVHTLSAQAKPESDPEMVPELAPTDQDASISE 330 >UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FVV3_DESHD Length = 413 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 112/286 (39%), Gaps = 19/286 (6%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVL---------QQTGLTLRQAQRFLSFPRKSIE 61 I L + + + L ++ GL+ ++QR ++ + Sbjct: 26 TEIRPLTIKQWNQFLRRMFNAEIKNPAALFEVGKEDLKKRLGLSDEESQRIQFLLSRAGQ 85 Query: 62 S--SLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRA 117 + L L + + YP +L + D P LF G++ + +VGSR Sbjct: 86 AVVELENLNNMGIFVTTRAEKSYPQRLKSVLKKDSPPVLFYSGDIELTQMEGIGIVGSRN 145 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 G + + A +G+T+ SG A+G+D VA AL+ G I++L + L Sbjct: 146 IDPKGLEFTKELGSKSAKQGLTVISGGAKGVDEVAQNEALRQGGKVISILADSLAQKI-- 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVT 236 +H +++EQ L++ F P YN +RN+ I LS +VV + + G+ Sbjct: 204 KHKEAREAIMEQRLLLLTSFHPRAPFTVYNAMQRNKYIYALSHIAVVVSSDYSKGGTWAG 263 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 A L + + EG L+K GA + +++ Sbjct: 264 ATENLRNKWVPLFV--RKDDIVPEGNEKLLKMGANPL-SAKDLFSE 306 >UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017439D3 Length = 169 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 11/179 (6%) Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +T+ SGLA GID VA K AL ++V+G GL+ ++P + L + E G +VSE+ Sbjct: 1 MTLISGLAEGIDTVALKTALDKGIEVVSVVGTGLDIVYPYDNRGLWERIAE-NGTIVSEY 59 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 PL P + FPRRNRII+G+S G+LV E+ + G+L+TA RE+FA+PG I P Sbjct: 60 PLGTQPTRWTFPRRNRIIAGMSDGILVAESFKKGGALITAELGFSMNREIFAIPGFINYP 119 Query: 258 GSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 EG + LIK A L T +I + + Q + +L Sbjct: 120 SFEGCNDLIKNNKAKLTTCGNDIAIEFLWDIKKEKSK---------LQKLTEEEQIVLK 169 >UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJY6_THEM4 Length = 323 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 22/247 (8%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPR-----KSIESSLCWLEQPNHHLIPADSEFYPPQL--- 86 + + ++ + +RF+ K ES + + ++ YP +L Sbjct: 60 EKIFSKRQKDVEKLIERFILIFEDKNLLKQAESEKKLCFEEEIQYVVYENATYPKKLHAL 119 Query: 87 LATTDYPGALFVEGELHALHSFQLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 LF +G ++A ++GSR S G + + L+ + SGLA Sbjct: 120 RKLDHPVYVLFYKGYWKDFDKLKIAAIIGSRNTSSEGLVLAKSLGKELSMNKIYNISGLA 179 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTI----HPRRHARLAASLLEQGGALVSEFPLDV 201 G D H+ ++ G + AVLG GL+ I +P+ + +L +L G ++SE P Sbjct: 180 LGADAAGHEGSM---GFTGAVLGQGLSKIEKRLYPKENIKLLFDIL-NKGIVLSEIPPSK 235 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 P+ Y F R+RIIS L+ V+V+E+ + G++ T + A +++ I G Sbjct: 236 KPIKYYFLCRDRIISALADSVIVIESRKKGGTMKTFQYAASLNKKIIVWKKNID-----G 290 Query: 262 PHWLIKQ 268 +L+K+ Sbjct: 291 NLFLLKK 297 >UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTH3_DESMR Length = 336 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 30/334 (8%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL--------------- 64 +++ + L + + A + L ++ + L Sbjct: 4 SILQFLQAKGSGEALLRRFLLFAAINGKNAAKSLCTSINNLSNELKINNDVASNIVNSAS 63 Query: 65 ------CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSR 116 L + N ++ S+ YP L+AT D P LF +G + + GSR Sbjct: 64 EAFFLHESLYKDNINVAWIGSDVYPHHLVATLKYDAPPVLFFKGCNKLFDNMGVGFCGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R E L + + +TSG A G+D AHK AL+ G +I VL G+ Sbjct: 124 KASEKGLLITRRCVELLVDKKICVTSGYAHGVDMAAHKTALKNGGKTIFVLVEGIMRF-- 181 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +A L + VS+FP ++ A N +RN I GLS +++VE+ + G+ Sbjct: 182 QHKREIAEFLSDDNYLAVSQFPPNLTWSARNAMKRNGTIIGLSDAMILVESGITGGTFAA 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 + L++G+ +F + P +E IK G I + + + NL+ + N Sbjct: 242 GKETLQRGQPLFVIDYAAPGPSAEANPNFIKNGGIPIRGNSDGIPNLEKIFDITNQSRRN 301 Query: 297 SFYSPD-----QQDVALPFPELLANVGDEVTPVD 325 + D Q L E+L +++ D Sbjct: 302 DINTKDLFTKHQSIKYLQKHEILLKSRNKLITRD 335 >UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD09_CHRVI Length = 228 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 10/220 (4%) Query: 83 PPQLL------ATTDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLAT 135 PPQLL P +V G+ L + +++VGSR S G R LA Sbjct: 6 PPQLLGPLNPIERQYAPERFYVAGDPAILETGARVSIVGSRQASPEGLARARKLARRLAG 65 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G+ + SGLA GID AH A + G ++ V+G L+ +PR + L A + L+S Sbjct: 66 EGIVVVSGLALGIDTAAHTATIAAGGRTVGVIGTPLDRSYPRENELLQARI-ATEHLLIS 124 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 +F ++FP+RNR ++ +S +++EA SGSL AL GR ++ Sbjct: 125 QFTPGTKTQRFHFPQRNRTMALISDATVIIEAGETSGSLSQGWEALRLGRLLYITRALAD 184 Query: 256 NPGSEGPHWLIKQGAILVTEPE--EILENLQFGLHWLPDA 293 +P P ++ GA ++++ + LE L L + DA Sbjct: 185 DPALRWPSKMLDHGAQILSDATLPDFLEALPSRLTPVLDA 224 >UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1TY42_MARAV Length = 460 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 113/313 (36%), Gaps = 17/313 (5%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVL------QQTGLTLRQA--QRFLSFPRK--SI 60 L + R A W+ Q + +L + G T + R + + ++ Sbjct: 22 SEAKPLTNKEWGRFAFWLKNQEMVPEDLLTGDLSQKLAGWTDSKITSDRIQTLLNRGSAL 81 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ + ++ YP +L A D P F G + L+ +AV+GSR Sbjct: 82 AMAMEKWTRSGLWVLTRSDSDYPKRLKARLGNDAPPVFFGCGNRNLLNQGGIAVIGSRKT 141 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S ++ A G ++ SG A+G+D A AL+ G +I VL N L Sbjct: 142 SDADLQFSHDLGAKSANDGRSVVSGGAKGVDEAAMLGALESEGTAIGVLANDLLRA--AT 199 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 A+ L+ L+S F + A N +RN+ I LS + V + G+ Sbjct: 200 SAKYRKYLMANNLVLLSPFYPEAGFNAGNAMQRNKYIYCLSDAAIAVHSGNSGGTWNGVL 259 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILV-TEPEEILENLQFGLHWLPDAPENS 297 ++ + P +P G L+++GA + EI + Sbjct: 260 ENIKHNWVPMWIK-PTDDPE-AGNATLVQKGAKWLPENLAEIDLDHLLRTADSSAEQGAD 317 Query: 298 FYSPDQQDVALPF 310 ++ ++ + Sbjct: 318 LFAQNRTETVPEV 330 >UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanobacteria RepID=B7JUP3_CYAP8 Length = 426 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 122/329 (37%), Gaps = 19/329 (5%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRK--SIESSLCWLEQPNHHLIPADSEFYPPQLLAT--T 90 L Q + ++R ++ ++ + ++ +I YP +L Sbjct: 54 FISRLSQLTIGKLDSKRLVALLQRGGLLALTVEKWLNQGLWIISRGDADYPLRLKQQLKY 113 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P L+ G L LAVVGSR G + E A + + + SG A+G+D Sbjct: 114 LAPPILYGIGNKDLLSKGGLAVVGSRNVDQEGLDYTYHVVEACAEQNIQVISGGAKGVDQ 173 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 + L+V G I VL N L + S+ E L+S + N R Sbjct: 174 ASMLGTLKVGGTVIGVLANNLLKA--SVDGKYRTSIKEGKLTLISAVDPNASFHVGNAMR 231 Query: 211 RNRIISGLSKGVLVVEAALR-SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ I L+ LV+ A G+ A AL ++V L I SEG L+KQG Sbjct: 232 RNKYIYALANYGLVISADYNTGGTWAGATEALNTIKDVPIL-VRIQGTISEGNQHLLKQG 290 Query: 270 AILVTE------PEEILE----NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 A E +E++E + + N F + V+ EL D Sbjct: 291 AKPFPETPWNRPIKELIETTVSEYKSIEFRQNNTQLNLFSQDNHSVVSDNKDELTPQDPD 350 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + D + + + V+ +L+ EL Sbjct: 351 ISSRDDALKSASERLYYAVLPIILQ-ELN 378 >UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAK1_FERPL Length = 246 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 3/216 (1%) Query: 91 DYPGALFVEGELH-ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P L++ G + L ++AV+G+R S G + L GV + SGLARGID Sbjct: 31 YAPKELYIAGSMKIPLPEPRVAVIGTRKPSPKGIEAASKITKVLVEHGVVVVSGLARGID 90 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 VAHK A++ G +IAVLG LN +P + L ++++ A +S++P+ +F Sbjct: 91 TVAHKTAIENGGKTIAVLGTPLNKFYPAENKPLQELIMKEHLA-ISQYPIGYITKPKHFV 149 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNR ++ +S ++VEA SG + L GR +F + + ++K G Sbjct: 150 LRNRTMALISNASIIVEAGESSGVISQGWETLRLGRPLFFWKSLVE-KDFKWVREMMKYG 208 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 A ++ ++ ++ L + P++ D Sbjct: 209 ACVLQNVNDLKRAIREMLPPPAEIPKSELRVVDLSS 244 >UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6B2_DESAS Length = 453 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 116/315 (36%), Gaps = 15/315 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTLRQAQRFLSFPRK--SIESSL 64 L SL + + + ++ LT QR + + + L Sbjct: 32 FTLKEWDSLSHKIIESVMKRPGAFFYTTPEEWRECLNLTPENIQRIQNLLTEGGQLGIEL 91 Query: 65 CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + YP +L P LF G+ S +A+VGSR G Sbjct: 92 ERLSSLGIWVTTRAEASYPARLKKVLRQKSPVVLFGAGDASLFQSEGVAIVGSRNVDEIG 151 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-IHPRRHAR 181 + T G+T+ SG ARG+D +A +AL+ G I+VL N + T I R + Sbjct: 152 SYFAEKLAGRCVTEGLTVVSGGARGVDMIAQNSALRSGGKVISVLSNSMETSIRQRENR- 210 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCA 240 +++ L+S P YN RN+ I LS +VV + + G+ A Sbjct: 211 --EAIVAGRLLLLSSTHPKAPFNVYNAMDRNKYIYALSHYAVVVSSEENKGGTWTGATEN 268 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE---PEEILENLQFGLHWLPDAPENS 297 L+ G + +G G + L+++GAI +E + + + Sbjct: 269 LKAGWVPLFV--RVGGQVPAGNNRLLEKGAIAFDSEVLADEAVILRNWLSDNIQVIVNYE 326 Query: 298 FYSPDQQDVALPFPE 312 ++ +++ P + Sbjct: 327 SSKRNENNISSPKKD 341 >UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Thermobifida fusca YX RepID=Q47S14_THEFY Length = 322 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 97/236 (41%), Gaps = 4/236 (1%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 L + L + + YP L + P +F +G + A +AV Sbjct: 71 LERAIAKARALLDQCASHGVGVHAFWEDHYPAALREIHEMPPVVFTKGAV-AHDRRAVAV 129 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG R S G E L R +T+ SGL G+D VAH A L+ G ++ VLG G+N Sbjct: 130 VGPRRPSPRGRAIVSGVAEALVERNITVVSGLTAGVDTVAHTAVLRRGGRTVTVLGTGIN 189 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 PR +L E+ G ++S F D P N R ++SG + +VVEA S Sbjct: 190 HYRPRGSRKLQQETAER-GMVLSPFLPDTPAARENLTLRTAVMSGYAAATIVVEAGEHSS 248 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 + A AL GR V + N + + G + + E++E + L Sbjct: 249 ARAQAHIALRHGRPVIFTQELLANQWAR--EHSERPGVYVASGIAELVEVVDSILA 302 >UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter RepID=A8FL55_CAMJ8 Length = 257 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 8/232 (3%) Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +G L L ++A++GSR S Y + L + + SG A G+D A AA+ Sbjct: 26 YKGNLSLLKQDKIAIIGSRRMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAM 85 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 +I + NGL+ I+PR + ++ + E AL SE+ D P Y+F RNR++ Sbjct: 86 PN---TIGIFANGLDQIYPRTNEKIIKQIYENALAL-SEYEDDYLPKNYDFLLRNRLVIA 141 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEP 276 LSK V+V +A ++SGS+ +A+ ALE + ++ LP +G S G + L+K+ A L+ + Sbjct: 142 LSKAVVVAQADIKSGSMQSAKLALELNKPLYVLPQRLG--ESTGTNLLLKENKAKLICDF 199 Query: 277 EEILENLQFG-LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 +E + ++ + + + ++ + ++ + Sbjct: 200 KEFVSEFASIDINQDEFLEFCKKGVSVDEALKIYGQKVYEYELEGKISIEGL 251 >UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1VRI3_POLNA Length = 456 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 15/291 (5%) Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ + ++ YP +L + P L+ GE+ L + LAVVGSR Sbjct: 85 QAIERWQARAIWVVSRADANYPRRLKERLRENAPAILYGCGEIGLLDAGGLAVVGSRHVD 144 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-IHPRR 178 + A TI SG A+GID A + AL+ G VL + L + R Sbjct: 145 EALIEYTMTVGRIAARARRTIVSGGAKGIDQAAMRGALEAGGKVCGVLADSLEKTVMNRE 204 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L L+E LVS + + +RN++I L+ LVV + L G T Sbjct: 205 HRNL---LMEGQLVLVSPYDPSAGFNVGHAMQRNKLIYALADAALVVSSDLNKGG--TWA 259 Query: 239 CALEQGREVFALPGPIGN--PGSEGPHWLIKQGAILVTEPEEILEN---LQFGLHWLPDA 293 A+EQ ++ +P + + SEG L K+GA+ +P + + Sbjct: 260 GAVEQLDKLRLVPVYVRSTGEASEGLEALRKKGAVTWPDPLDADSFQTVFEAITPVSETQ 319 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 +S + V+ P +A D + +A Q V EV +Q LE Sbjct: 320 VSAELFSSGEPPVSAPAA--MAVFPDAQPLLSAIAIAKDQSVTEVASQTLE 368 >UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6W9_9FLAO Length = 311 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 13/287 (4%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M E + L +I + M + +H ++ ++L L+ + ++ L Sbjct: 1 MEKYIENIIALANIKGIGASFMKQHSHLISLYRDNLEMLL---SLSNKIDEKDLQVNILK 57 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + +I YP LL D P L+ +G + LH +AV+G+R + Sbjct: 58 ARDIISECNANGIKIISYLDADYPKLLLEIKDPPPVLYAKGNIELLH-KSIAVIGTRKST 116 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN--TIHPR 177 G + + + + I +GL GID + + +V I V+ GLN + Sbjct: 117 ELGNKIAKKVGQYFSEH-WAICNGLVEGIDKHSITNSDEVFSNVIGVISGGLNFEKTSSK 175 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 LA +L++ G L+SE + ++ + +RI +GLS+G+++++++ GS T Sbjct: 176 ITKELAKKVLDRNGLLLSENEPNKKEDQFSGSKASRIQAGLSRGLILIQSSSNGGSKYTL 235 Query: 238 RCALEQGREVFALPGPIGNP-----GSEGPHWLIKQGAILVTEPEEI 279 + E R + + + G L+ + + + +I Sbjct: 236 KTFSELNRPIGIIDFKTNSEYNNSDEFSGNRLLLTELKEGLQKMCDI 282 >UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2077 Length = 167 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 4/170 (2%) Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++SEF V PL +NF +RNRIISGL+ V+++EAA RSG+L TA AL QG++VFA+PG Sbjct: 2 IISEFQEGVEPLPFNFLKRNRIISGLADAVIIIEAASRSGTLNTATHALNQGKDVFAVPG 61 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + L+KQGAI T E+ILE ++ +N Sbjct: 62 NITSPLSAGCNALLKQGAIPATSVEDILE----VINLQNQENQNPSQISLPVGDTPLENA 117 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++ + V D + ++A + + T L LE+ G I + LR Sbjct: 118 IIELLNQGVRDGDELQKQAKAEISDFNTTLTMLEINGIIKPLGANKWCLR 167 >UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=C5BTJ3_TERTT Length = 462 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 115/386 (29%), Gaps = 63/386 (16%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 A + + + L+ + + ++ ++ YP Sbjct: 64 ADLLVTDPKALLQGWHDARIGAERIIALLNRGHSLALA-MEKWQRAGLWVVTRSDPEYPK 122 Query: 85 QLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITS 142 +L TD P LF G L++ LAV+GSR S + A G+ I S Sbjct: 123 RLKQRLKTDSPPVLFGCGNKALLNAGGLAVIGSRNASEADLAFTEQVGAKAAKEGIAIVS 182 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G ARG+D A A++ GV I V+ + L + L++ LVS F + Sbjct: 183 GGARGVDETAMLGAMKQGGVVIGVMADSLLKS--ATSIKWRKGLMDDHAVLVSPFYPEAG 240 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG------N 256 A N RN+ I L+ LV+ + + G+L A L++ + + Sbjct: 241 FSAGNAMARNKYIYCLADSSLVIHSGKKGGTLSGAEENLKKAWVPLWVKQTTDKDAANAD 300 Query: 257 PGSEGPHWLIKQG-----AILVTE----PEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 ++G WL A L+ ++ E + + D + Sbjct: 301 LVTKGGRWLEADTQAFRIAQLMCNDGGRANQVQEQMGDLFSTPAQPKFFAETESDPEIEP 360 Query: 308 LPFPEL-------------------------------------------LANVGDEVTPV 324 E+ L + + Sbjct: 361 DHKKEVVESEIESAVNENQAYNVVNSEQTAESEAASSGSVDFYQLFVSELQYLAKKPVTA 420 Query: 325 DVVAERAGQPVPEVVTQLLELELAGW 350 + + E ++ L E G Sbjct: 421 EALIESTQLHKSQLTEWLKRAEEEGL 446 >UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AR88_DESPS Length = 428 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 124/361 (34%), Gaps = 27/361 (7%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQA------QRFLSFPRKSIES-- 62 S L D ++ W+ +LQQ + QR + + ++ Sbjct: 23 SSTKPLSQGDYNKLVDWLISSGMRPKDLLQQENIDPAAKGSGIYQQRLEALLGRGVQLGF 82 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ ++ +I YP + P LF G+ L LA++GSR Sbjct: 83 AVEEWQRNGIWIISRSDTDYPTRYKNHLGKQAPPLLFGVGDRSLLTGGGLAIIGSRNVDE 142 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G + R A + + SG ARG+D + AAL G++I VL + L Sbjct: 143 IGGNFTREVGALCAQNRMPVVSGGARGVDQFSMTAALDAGGMTIGVLADSLLKK--SLER 200 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA-LRSGSLVTARC 239 ++ L+S + RN++I ++ LVV A + G+ A Sbjct: 201 TARKAIARGRLLLISACHPNARFTVGTAMGRNKLIYAMADYGLVVSAEHKKGGTWAGADE 260 Query: 240 AL--EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA---- 293 L E VF G P G L+ GAI + + +NL+ L L Sbjct: 261 ELKREHSIPVFVRQGN-DVPL--GNSKLLGLGAIAWPDKVD-HQNLRGQLTELSSQCAQK 316 Query: 294 --PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERA--GQPVPEVVTQLLELELAG 349 +N Q+ P EL E+T V E V V +L L L Sbjct: 317 STQKNMSLLDFQERQKEPAKELPKAESIELTESSNVVEDTAAKHSVTTVYETVLPLILEK 376 Query: 350 W 350 Sbjct: 377 L 377 >UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YRJ4_ANASP Length = 415 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 131/361 (36%), Gaps = 35/361 (9%) Query: 24 IAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIPA 77 + + +H+ L+Q ++ +R L+ + SL ++ Sbjct: 43 LLQQEMRPAHLLESTVKEQLKQLHISKLDPERLLALLARGAMLSLAVEKWTSRGLWILGR 102 Query: 78 DSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L P L+ G++ L LA+VGSR + R ET A Sbjct: 103 SDAQYPKLLKQRLKHSAPAILYGVGKIELLSQGGLAIVGSRDVDEELLAYTRKVAETSAL 162 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G+ + SG ARG+D A + L G S+ VL + L +++ +SL E AL+S Sbjct: 163 DGMQVISGAARGVDQEAMLSILNAGGTSVGVLADSLTKA--AVNSKYRSSLKEGRLALIS 220 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCALEQGREVFALPGPI 254 + D N RN+ I L+ LVV ++ + G+ A AL + +E +P + Sbjct: 221 SYDPDAGFNTGNAMGRNKYIYALADYALVVNSSFGQGGTWAGAVEALSRLKE---IPVFV 277 Query: 255 GNP--GSEGPHWLIKQGAILVT-------------EPEEILENLQFGLHWLPDAPENSFY 299 SEG L QGA + ++E++ + LP Sbjct: 278 RMAPTASEGNRQLHNQGAKPFPPEPWNGSLNKLLAKASSLVESIDTNIIQLPPEKSQDTQ 337 Query: 300 SPDQQDVALPFPE-----LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 S + E +L ++ + +A+ ++ L + G + Sbjct: 338 SHELSSTPQNIYEAVLPFILGHLQ-QPKDAKTLAQCLEVQPSQMQEWLKKAVQEGKVRKT 396 Query: 355 P 355 Sbjct: 397 N 397 >UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS39_9FLAO Length = 428 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 107/272 (39%), Gaps = 14/272 (5%) Query: 14 SSLYGDDMVRIAHWVAK----QSHIDAVVLQQTGLTLRQ----AQRFLSFPRKS--IESS 63 L + R+ W+ + + L + + R + + + Sbjct: 25 KPLSLLEWNRMVRWLQSKKLKPEDLLTIDLNKLLINWNDTTIPKNRIIELLDRKMALAIR 84 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLA-TTDY-PGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + +I +FYP L D P LF G+ + L+ + +VGSR S Sbjct: 85 LEKWSKAGVWIINRSDKFYPNSLKNKLKDRVPPILFGIGDKNLLNKNYIGIVGSRHISET 144 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + + + L + + SG ARGID + L+ NG ++ V+ + + I + Sbjct: 145 DIKVTKDIVKQLYAQNYGVVSGGARGIDEHSMTGILECNGYALGVVAD--SLIKKSSSSI 202 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 +++ L+S F +V N RN+ I LS+ +VV++ + G+ A L Sbjct: 203 YRKHIIDNKLVLISPFNPEVGFNVGNAMGRNKFIYILSQAAIVVKSETKGGTWEGANENL 262 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILV 273 + + PI N ++G ++++G + Sbjct: 263 KNNWAPLWVVKPIENKTNKGNFEIVRKGGRFL 294 >UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID=B7JTA5_BACC0 Length = 284 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 7/186 (3%) Query: 92 YPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G++ L + ++A+VG+R S + I SGLA+GID Sbjct: 104 MPLFMYSKGDISLLEVNQKRVAIVGTRHPSQKAIAITKKLTRKFVEDNYVIVSGLAKGID 163 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 ++H+ A+ G +IAVL N I+PR + LA +L+ GG LV+ +F Sbjct: 164 TISHETAIVHKGKTIAVLPTNFNKIYPRENQELAKKILD-GGLLVTSIGPKENTYKSSFL 222 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S V+V E L+SG++ T R A E +++ + + + G Sbjct: 223 DRNQYLANISDIVVVTETNLKSGTMNTIRNASEASKKILFV----DQEDELINNKIRGFG 278 Query: 270 AILVTE 275 ++ + Sbjct: 279 GEMLND 284 >UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SFU0_ACIJO Length = 433 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 115/355 (32%), Gaps = 57/355 (16%) Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + + + +I + YP + P L+ G L L+S LAV+GSR Sbjct: 85 QVIELWQSRSIWVISRADKAYPRLIKDKLKDQSPPILYGFGNLDLLNSGGLAVIGSRKID 144 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + + A G + SG A+G+D A AL G V+ L Sbjct: 145 DSIYNYSNNIGKLAAKFGTKVISGGAKGVDQAAMYGALHEGGYVCEVMAENLERAVLDAG 204 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L+ LVS + + +RN++I LS LVV + G T Sbjct: 205 R--RNYLMSGNLILVSAYDPKASFNIGHAMQRNKLIYALSDASLVVASDFNKGG--TWAG 260 Query: 240 ALEQGREVFALPGPIG-NPGSEGPHWLIKQGAILVTEPEEIL------------------ 280 A EQ ++ +P + + S+G L K+GAI P++I Sbjct: 261 AAEQLDKLKFVPVYVRLDNESKGLRELYKKGAIPWPNPQDINSFRQIFDVSNLANNNLNL 320 Query: 281 -------------------ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLA------ 315 +NL + + S + + +V P EL Sbjct: 321 SLFDQEDIVKEFKVSDIAQQNLTNTIDESTKSHTPSATNTSEIEVQKPADELFEFAANII 380 Query: 316 -NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRR 369 N+ D +++ + + L L I R + ++ R Sbjct: 381 LNLLDTPLKDSEISQALNISLAQTKLWLSRLVEEERIEK------RTKPVTYIVR 429 >UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis AR01/DG RepID=C7WQK9_ENTFA Length = 288 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 92 YPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G+ L ++A++G+R S + + G I SGLA G D Sbjct: 105 MPLFIYCKGDTSLLTKDKKRMAIIGTRHPSKKTIEITQKLTQKFVEAGFVIVSGLAEGTD 164 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 +AH+ AL+ NG +IA+L N I+P+ + +L+ ++E G L++ +F Sbjct: 165 TIAHETALKNNGKTIAILPTNFNKIYPKSNKKLSDKIVE-DGLLLTAIGPKENTYKSSFL 223 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S VLV E L+SG++ T R A E +++ + + + + + G Sbjct: 224 ERNQYVANVSDVVLVTETNLKSGTMNTIRNASEAAKKILFV----DQNDEKINNKIYEFG 279 Query: 270 AILV 273 ++ Sbjct: 280 GEML 283 >UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE53_9HELI Length = 269 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 29/270 (10%) Query: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 +F G L L ++A++G+R+ + Y ++ TL+ +G I SG A Sbjct: 22 KHLYKAFNGVFARGHLSLLKKPKVAIIGTRSPNQYAKQITTQLANTLSQKGFVIVSGGAI 81 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID +AH L N +I +L G++ I+P+ +A L + L Q G ++SE+ P+ + Sbjct: 82 GIDSIAH---LNANNNAILILPCGIDAIYPKENATLINN-LAQNGLVLSEYGGTYKPMKH 137 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 F RNR+I S +++ +A ++SGS +A A+ + +F LP + S G L+ Sbjct: 138 TFLERNRLIIAWSDIIIIPQADIKSGSSSSANLAITLQKPLFVLPHRLH--ESRGTQELL 195 Query: 267 K-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 + Q A + + E ++N +H + E + F + L GD Sbjct: 196 QAQKAQCIYDIESFVKN-ACEIHNIAYMQEIKDPLLEFAYNNGLFEDALKLFGD------ 248 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + EL G I Sbjct: 249 ---------------LVFAYELEGKIKRNG 263 >UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C392BE Length = 331 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 14/253 (5%) Query: 79 SEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YP +L P L+ G L L+ LA+VGSR + + + A + Sbjct: 1 DRHYPQRLKQHLKYLSPPILYGVGNLELLNKGGLAIVGSRNVNEAVLSYTQQLAHISAQQ 60 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 + + SG ARGID + L+ G +I VL N L + SL E AL+S Sbjct: 61 NIQVISGGARGIDKCGMLSCLEAGGTTIGVLANSLGKA--SLESDYRQSLDEDRLALISP 118 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA-LRSGSLVTARCALEQGREVFALPGPI- 254 + + N RN+ I L+ +V+ A+ + G+ A AL +++ +P + Sbjct: 119 YDPEAGFHVGNAMGRNKYIYALADYAVVISASFNKGGTWSGAVEAL---KKLPNIPVFVC 175 Query: 255 GNPGSEGPHWLIKQGAILVTEPE---EILENLQFGLHWLPDAPENSF--YSPDQQDVALP 309 N ++G L+K GA E ++L+ L+ G E ++ + Sbjct: 176 QNSQTQGNMELLKLGAKPFPEMSGKLDLLDILKPGETEDAVEVEQMALDFAVNLTPENPA 235 Query: 310 FPELLANVGDEVT 322 + +V T Sbjct: 236 PTPIYVDVNPTPT 248 >UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VSY8_9CYAN Length = 426 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 22 VRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIP 76 + + +++ + L Q + +QR ++ + + SL ++ Sbjct: 42 WLLEEHLNPADLLNSTLKNRLSQITINKLDSQRLIALLERGVMLSLAVEKWTNQGLWILG 101 Query: 77 ADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 YP L + P L+ G+ L LA+VGSR G + + A Sbjct: 102 RGDADYPQCLKQRLKHNAPAILYGIGKRELLSQAGLAIVGSREVDQEGLNYTERVVQICA 161 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 +G+ + SG ARG+D + L G ++ VL + L + A + E LV Sbjct: 162 EQGINVISGGARGVDQASMLGILAAGGNAVGVLADSLTKAAVAS--KYRAGIKEGRLTLV 219 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 S + D A N RN+ I L+ LV+ +A+ G T A E R+V +P + Sbjct: 220 SAYDPDASFSAGNAMGRNKYIYALADYALVISSAVGKGG--TWAGATEVLRKVQDVPVFV 277 Query: 255 GNPGS--EGPHWLIKQGAILVTEP 276 G+ EG L+++G I+ E Sbjct: 278 RMQGTVPEGNQKLLEKGGIVFPEI 301 >UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YP58_9FIRM Length = 270 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query: 58 KSIESSLCWLEQPNHHLIPADSEFYP---PQLLATTDYPGALFVEGELHALH--SFQLAV 112 + + + +I + +P + A D P LF +G++ LH + +AV Sbjct: 3 SQLTKEIEANTALD-GVICIFDQDFPVINSTVKAKGDRPYLLFYKGDISLLHHLNNNVAV 61 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +G + S ++ R L + I SGLA+G D +AH+ +++ G +IA+L + +N Sbjct: 62 IGHTSPSENIQKRERKIISQLVKKQQVIVSGLAKGCDVIAHEECMRLGGKTIAILPSSIN 121 Query: 173 TIHPRRHARLAASLLEQGGALVSEF--PLDVP--PLAYNFPRRNRIISGLSKGVLVVEAA 228 + P+ HA A ++E GG L+SE+ P P +A F R+R+ + +K V+++ + Sbjct: 122 EVLPKEHAERAKQIVETGGLLISEYYAPPSNPRFEMAKRFIDRDRLQAMFAKAVILIASY 181 Query: 229 L----RSGSLVTARCALEQ 243 SG+ AL+ Sbjct: 182 AVHKGDSGARHAMNKALKY 200 >UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F7U3_HAEPS Length = 331 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 120/314 (38%), Gaps = 21/314 (6%) Query: 14 SSLYGDDMVR-IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 + + + + ++ + +L ++ ++ + +IE + L Sbjct: 17 NGIGDAWINKNLSKTKTSPLELIVELLAKSVKKETVSEEIFLQRKSNIEKQILLLGDSCD 76 Query: 73 HLIPADSEFYPPQLLATTDY--PGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRL 128 ++ E +P A + P LF +G+L L + +AV+G E R Sbjct: 77 GVVAIGDEKFPTHRGAVKESEQPNVLFYKGDLGLLSLENTNVAVIGVLTPDEDTEMDERK 136 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L + I SGLA+G D +AH L+ G ++A+L + LN I P +H A + E Sbjct: 137 IVSLLVQQDAVIVSGLAQGCDFIAHDQTLKFGGATVAILPSPLNNIMPVKHREFAQQIFE 196 Query: 189 QGGALVSEF--PLDVPPL-AYNFPRRNRIISGLSKGVLVVEAA-----------LRSGSL 234 GG L++E+ + + RR+R+ + S V++ + + SGS Sbjct: 197 TGGLLITEYYDAPSTKMELSSRYIRRDRLQALFSDIVILSASYTPNSVDPTALKIDSGSR 256 Query: 235 VTARCALEQG--REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +LE R V NP + ++K ++V +P + + L+ Sbjct: 257 HAMEKSLEYSIPRAVIYHEKYQRNPKYDLNRQVMKDAKVIVIDPTNPMPMITQILNLDKS 316 Query: 293 APENSFYSPDQQDV 306 N Q + Sbjct: 317 PSSNQESDDGQMGL 330 >UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E615 Length = 322 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 19/267 (7%) Query: 52 FLSFPRKSIESSLCWLEQPNH--HLIPADSEFYPPQLLATTDY--PGALFVEGELHAL-- 105 F K +++ + L E +P + P ALF +G++ L Sbjct: 52 LCRFNDKQAAILSELIKRKDVIDGLTTIVDEDFPIHRGTVKNSQKPVALFYQGDIRLLDP 111 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +AV+G + E+ + L ++ + I SGLA G D +AHK A+ G ++A Sbjct: 112 CKPSVAVIGLLDPDFSTEKSEISLVDELVSKNIIIVSGLANGCDAIAHKQAVIKQGKTVA 171 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY---NFPRRNRIISGLSKGV 222 VL + L+ I PR + LA ++E GG LV+E+ D + R+R+ + S V Sbjct: 172 VLPSSLHNILPRGNQSLAKEIVESGGLLVTEYMHDASSKLEFTARYQERDRLQALFSDAV 231 Query: 223 LVVEAALR------SGSLVTARCALEQG--REV-FALPGPIGNPGSEGPHWLI-KQGAIL 272 ++V + + SG+ + AL+ R V + + NP + LI K I Sbjct: 232 ILVASYAKNNQGNDSGARLAMEYALQYDIKRAVMYNISIDSRNPKYDLNRQLILKDTNIH 291 Query: 273 VTEPEEILENLQFGLHWLPDAPENSFY 299 V +PE+ + L L + Sbjct: 292 VIKPEDTMCLAGNLLDKLITEKSKNIQ 318 >UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQZ2_WOLSU Length = 259 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 30/257 (11%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 LF G+L L ++A+VG+R + Y + R + RGV + SG A G+D +AH+A Sbjct: 22 LFYHGDLSLLKRPKVAIVGTRHPNAYTKAMTRELARFWSERGVVVVSGGAFGVDVLAHEA 81 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 A +I + + L+ +P H + + + G L+SE+ P Y F RNR+I Sbjct: 82 AFPS---TILISPSSLDLPYPPSHKPIIERI-AKEGLLLSEYESSFMPKRYTFLERNRLI 137 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVT 274 LS +++ +A L+SGS+ +A A++ G+ ++ LP + S G L+ ++ A+ + Sbjct: 138 IALSSLIIIPQADLKSGSMQSAHTAIKLGKPLYVLPHRL--KESLGTQSLLERELALPLY 195 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 P+ +LE + + + +LL + + VA Sbjct: 196 NPQTLLE---------------RHFPELAKPLKKSKDDLLLYAQTLPSYEEAVAR----- 235 Query: 335 VPEVVTQLLELELAGWI 351 ++ E EL G I Sbjct: 236 ---FGERIFEYELEGKI 249 >UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W4_FRASN Length = 302 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 17/239 (7%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAVVGS 115 L + +P L T P L+ G +L L + + G+ Sbjct: 70 DPARLLATATDAGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGA 129 Query: 116 RAHSWYGERWGRLFCETL----ATRGVTITS-GLARGIDGVAHKAALQVNGVSIAVLG-- 168 R S YG+ L A + VTIT+ G+ GID A + A + ++AVL Sbjct: 130 RLCSEYGQAVTAGLAYDLTTPLAAQPVTITAAGIGEGIDAAALRIA-ATHRRAVAVLTAT 188 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G+ + L + + GG ++ +PP + + R R+++ L++ ++VE+ Sbjct: 189 TGITRY----NRTLLTDVAD-GGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLVEST 243 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFG 286 R + TA+ A + R V A+PGPIG+ S GP+ L+ +G A LVT E+I L Sbjct: 244 TRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQT 302 >UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma RepID=Q4A8B6_MYCH7 Length = 259 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 91/247 (36%), Gaps = 17/247 (6%) Query: 43 GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 L Q ++ L+ I E YP + P LF +G++ Sbjct: 17 KLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGKI 76 Query: 103 HAL--HSFQLAVVGSRAHSWYGERWGRLFCETL---ATRGVTITSGLARGIDGVAHKAAL 157 L + + A++G Y + F ++L R + +T+G +G++ + Sbjct: 77 EFLENKNPKSALIGE----KYNSKIQEFFNKSLDQIIKRHILVTNGY-KGVEQKIMEYYR 131 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 IAV NG+ P + + ++ ++SE+P RNR+++ Sbjct: 132 LYEAPIIAVSANGIENPWPFENFQHYKNI-----LIISEYPTGCNVNKKRLIERNRLVAA 186 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFAL--PGPIGNPGSEGPHWLIKQGAILVTE 275 L+ ++V GS L+ G+E++ G LI QGA +TE Sbjct: 187 LANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYAGCSDLIYQGANWITE 246 Query: 276 PEEILEN 282 +++ Sbjct: 247 IKDVYYE 253 >UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BQ27_VEIPT Length = 315 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 11/182 (6%) Query: 75 IPADSEFYPPQLLATT--DYPGALFVEGELHALH--SFQLAVVGSRAHSWYGERWGRLFC 130 + +P + D P LF +G+L L + +AV+G + Sbjct: 67 VCCFDAEFPVINESVPKGDRPYLLFYKGDLSLLRDLNRNVAVIGYTTPNEALIARESKIV 126 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 E L G I SGLA+G D + H + G +IA+L + LN I P H +A ++E+G Sbjct: 127 EHLVHHGQHIVSGLAKGCDAIGHTVCMDCGGKTIAILPSPLNAISPADHRDMAHQIIEKG 186 Query: 191 GALVSEFPLDVPPLAY---NFPRRNRIISGLSKGVLVVEAALR----SGSLVTARCALEQ 243 G ++SE+ + R+R+ + +K V+++ + SGS A Sbjct: 187 GLVISEYYNGPRSRHEAINRYVERDRLQALFAKAVVLIASYEGRDGDSGSRHAMGKAHSY 246 Query: 244 GR 245 G Sbjct: 247 GH 248 >UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCQ9_9DELT Length = 297 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 114/260 (43%), Gaps = 21/260 (8%) Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 AVVGSRA E +RG ++ SG A GIDG AH+AAL +AVL G Sbjct: 50 AVVGSRAAHRAYLDCLPAVLELARSRGWSLVSGGALGIDGGAHQAALDRRVAQLAVLPCG 109 Query: 171 LNTIHPRRHARLAASLLE--QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 + +P RHA L ++L+ + G L ++ P+ P F RN I+ GL+ VLVVEA Sbjct: 110 RDQPYPSRHAALFTAMLDAPEAGLLFAQ-PVGTSPTRAMFASRNAIVVGLASAVLVVEAR 168 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP-----EEILENL 283 RSG++ T R AL +G + A+ G S G LI GA + P ++ L Sbjct: 169 SRSGTMGTGRLALGRGVPLAAVSG------SAGAGRLIAAGARGLPRPGGPTHRDLRAAL 222 Query: 284 QFGLHWLPDAPEN-SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 L D + + L G +D A ++QL Sbjct: 223 DTFLGAALDPQRTIEEPTRPWPEALSDLRARLRAAGPRGLSID-----ACPDPEGTLSQL 277 Query: 343 LELELAGWI-AAVPGGYVRL 361 E EL G + A PG +V L Sbjct: 278 CEAELLGLVTEATPGRWVAL 297 >UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Bacteria RepID=A5UX61_ROSS1 Length = 454 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 97/259 (37%), Gaps = 10/259 (3%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGE 101 + + L+ S W+ + ++ YP +L P L+ G Sbjct: 69 VNPERLTALLARGGALALSVEKWVNK-GLWVMSRSDADYPQRLKTRLGRTAPPLLYGAGN 127 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L LA++GSR + + + R A +G+ + SG ARG+D A +AAL G Sbjct: 128 RQLLGQGGLAILGSRNSAAHALAFTRRIAGMCARQGMPVLSGAARGVDSEAMQAALDARG 187 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 V I VL + L R+ ++ LVS + N RN+ I LS Sbjct: 188 VVIGVLADSLLKAAVGRN--YRQAVRNGNLVLVSACDPEAGFTVGNAMGRNKYIYALSDY 245 Query: 222 VLVVEAAL-RSGSLVTARCALEQGR-EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 LVV AAL G+ A L + +F I + G L GA+ +E + Sbjct: 246 ALVVSAALGEGGAWSGAVENLTKRWVPLFVW---IDDESLPGNQRLRDMGALPFSENQCA 302 Query: 280 LENLQFGLHWLPDAPENSF 298 E++ L D Sbjct: 303 GESVHDLFKRLADETTPQH 321 >UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTA5_9DELT Length = 233 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 17/203 (8%) Query: 83 PPQLLATTDYPGA--------------LFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 P + P ++ G L L+ GSR S G Sbjct: 2 PTLRKTISPLPPISVREIFLKNGKAQKIYCMGNLKLLNIPGAGFCGSRKVSPAGISVAED 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 +A G + SG A G+D AH AAL G ++ VL G++ R +A Sbjct: 62 CAVQIAQSGYPVISGYAAGVDMTAHTAALAAGGTTVIVLPEGIDHF--RIKKEIAEFWDW 119 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 ++S F ++ Y RN +I LS+ ++V+EA + G+L +L+ +F Sbjct: 120 NRILVISPFDPEMRWTVYRAMGRNHVIVALSRAMIVIEAGEKGGTLAAGLASLKAQCPLF 179 Query: 249 ALPGPIGNPGSEGPHWLIKQGAI 271 + + + G L+++G Sbjct: 180 VVDYGEND-YAVGNRVLLQKGGR 201 >UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XN39_9HELI Length = 354 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 107/287 (37%), Gaps = 27/287 (9%) Query: 23 RIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL---EQPNHHLIPADS 79 ++ + + + ++ + + L ++ + F + + L + Sbjct: 20 KLNKKIEEINKLNKKIEEINKLN-KKIEEIKKFDFNNEMEEIGNLLDNSKEGIRYTAFGD 78 Query: 80 EFYPP----QLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAHSWYGERWGRLFCETL 133 E +P ++ D P L EG+L L +AV+G + ++ + + Sbjct: 79 EDFPECRFERIENKNDLPVFLAYEGDLKLLSKNNFNIAVIGILEPTEEIKQLEKEILGEI 138 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ-GGA 192 TI SGLA G D +AHK+ N +IA+L + L+ I P+ + LA+ ++ G Sbjct: 139 LKYDATIISGLALGCDTIAHKSVSDQNC-TIAILPSTLDNILPKENRELASEIVRNKNGL 197 Query: 193 LVSEFPLDVPPLAY---NFPRRNRIISGLSKGVLVVEAALR----------SGSLVTARC 239 L+SE+ + + +R+R+ + S V++ + SGS Sbjct: 198 LISEYYKEAENKFEYINRYIKRDRLQALFSDMVILTASYSEKDSKRDKKKDSGSRHAMGK 257 Query: 240 ALEQG--REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 A + G R V + LI + E+++ Sbjct: 258 AKDYGIKRAVMYDETIFDDEKFNLNRELIAMKMSIAKLDEQVIMEFN 304 >UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFY3_MYCFE Length = 247 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 19/230 (8%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + I+ L LE+ I A E +P L P LF +G + L+ + + Sbjct: 31 KKINQAEIDIVLKELEEKGIKYITALDENFPEILKNFRYSPYVLFYKGNIGLLNKKAVCL 90 Query: 113 VG---SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 G S ++ F E + + + +D + Q I VL Sbjct: 91 TGDIESPIVDINIKKSQNTFLE-----NYPLITNDFKNLDQKFVEIYRQNKKEIIHVLPY 145 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ I + L L +S++P + F RN ++S L++ ++V + Sbjct: 146 GLDYI--KETINLDTELY------ISQYPPQTHAKLFRFKERNILVSFLAEFLIVYSSKS 197 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 SG L A +EV+ PG + +G ++LIK GA L+T+ E+ Sbjct: 198 DSGILSLATAFANNNKEVYCYPGLSYD---DGNNYLIKLGANLITQIAEV 244 >UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pulmonis RepID=Q98Q22_MYCPU Length = 244 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 94/251 (37%), Gaps = 21/251 (8%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 I + + + + +++ S LE+ + I S YP + Sbjct: 14 GNTKKIFESLKKHEQIDPVELKKYKSM-----------LEENSIKYITILSSKYPEEFKY 62 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 + P LF +G L L + ++A+ G S F E + + + G Sbjct: 63 LNNPPFILFYKGNLDLLKNTKIALSGD-VVSQKNLDLLDDFVENMKNETLVTLN--FPGF 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D K +Q + I + NGL+ + + L+S +P +V Sbjct: 120 DDEVVKKFIQKDLKVIFLAANGLDNPYFSQKEFDFEK-----NLLISIYPPEVGVKKERL 174 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 R+ I++ L+K ++ E S SL LE G+ ++ P N G + LIK+ Sbjct: 175 QSRSEILASLAKYLVFFEFKKNSKSLHLVNFFLEMGKMIYCYPTDNFNEF--GNNDLIKE 232 Query: 269 GAILVTEPEEI 279 GA L+T ++ Sbjct: 233 GAKLITHYSDL 243 >UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter pasteurianus RepID=C7JES2_ACEP3 Length = 214 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 46/202 (22%) Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 +FPRRNR+I+GL G +VVEAA SG+L+TAR ++ GRE+FA+PG +P G + L Sbjct: 4 RHFPRRNRLIAGLGLGCVVVEAAPHSGTLITARMVVDYGRELFAVPGSPLDPRCRGSNNL 63 Query: 266 IKQGAILVTEPEEILENLQFGLHWLP----------------------------DAPENS 297 ++ GAIL +IL +L + P Sbjct: 64 LRNGAILTESVADILPHLPPVIPQSAGSTVSLPSISAPRQKKSVSPPQTGLPFVSEPPER 123 Query: 298 FYSPDQQDVALPFP------------------ELLANVGDEVTPVDVVAERAGQPVPEVV 339 + Q+V P LL+ + VD + R V+ Sbjct: 124 AFFASPQNVDEKEPIALKPHFSAASTAQDVRENLLSLLSFTPIAVDDLIRRCQFSASAVL 183 Query: 340 TQLLELELAGWIAAVPGGYVRL 361 L ELEL+G ++ GG V L Sbjct: 184 VALTELELSGCVSTYSGGMVGL 205 >UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZJ44_9GAMM Length = 166 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%) Query: 10 LMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L S+ L + + + + + L+Q Q Q + ++ I+++L W Sbjct: 3 LDSVPRLPKRLLFSLLRRHNIDQLDTLSYSQLRQYKFNDAQIQSLKNPNQQKIQANLDWQ 62 Query: 68 E-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 N ++I D YPP L ++ P L+++G++ L Q+A+VGSR+ + YG++ Sbjct: 63 NVDQNKYIIAFDDPSYPPLLKEISNPPLLLYLQGDITLLLKPQIAIVGSRSCTLYGQQKS 122 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 F + L+ G I+SGLA G+DG AH+ AL Sbjct: 123 YQFAQQLSKAGFVISSGLAMGVDGFAHQGALDA 155 >UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mobile RepID=Q6KHR8_MYCMO Length = 240 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 87/249 (34%), Gaps = 17/249 (6%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW---LEQPNHHLIPADSEFYPPQLLA 88 I ++ G + + + IE + W LE ++ + YP Sbjct: 3 EIIIYFSIKYQGDYFKIKNALIKMEKIDIEKLIQWNKKLENNKIKVLTKFDQTYPNSFKN 62 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P A+F +G + L+S ++ +VG + + T+ S + Sbjct: 63 IKYSPYAIFYKGNIDLLNSEKIMLVG--DSFEKSYEDIENSLHPIILKK-TLLSLGFKNF 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL-LEQGGALVSEFPLDVPPLAYN 207 D + NG I+ NGL + + + L ++SE+P + Sbjct: 120 DEKIYNLFKNNNGKIISFSANGLIDQY------MFNEIDLNLNNLIISEYPFKINLSKRK 173 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 +RN + S LS +++ + S L G+E+F P + G L+ Sbjct: 174 LFKRNYLSSILSDFLIIYNSEKNSKLFNLINFFLNSGKEIFCFPPKGDD----GNLILLN 229 Query: 268 QGAILVTEP 276 GA VT+ Sbjct: 230 DGANFVTKI 238 >UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5U6_DESRM Length = 192 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 17/160 (10%) Query: 106 HSFQLAVVGSRAH---SWYGE--------RWGRLFCETLATRGVTITSGLARGIDGVAHK 154 + +A++G R S E + A + V + SGLA GID AH Sbjct: 11 NKEIIAIIGPRRPIKGSSASEILQHQRDCDIAYHLAQQAARKDVVVLSGLATGIDTAAHL 70 Query: 155 AALQVNGVSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 L G+++AV+ GL+ I P + L ++ +GG +VS+F P + F R++ Sbjct: 71 GCLDAGGITVAVVPFGLSAPISPAENRSLFHQIVHKGGCIVSQFKPKQPAAKWTFIVRDK 130 Query: 214 IISGLSKGVLVVEAALR-----SGSLVTARCALEQGREVF 248 + LS ++VV G+ A + G+ +F Sbjct: 131 TQAELSSKIVVVGTFPPNGLIVGGTRHCALWGRKMGKPLF 170 >UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A5L4_MYCS5 Length = 246 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 87/229 (37%), Gaps = 15/229 (6%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH---SFQL 110 + I+ + + I YP L P L+ +G ++ L+ +L Sbjct: 28 KLRKSEIDEITNIYLKNDIKFISIFDLNYPSSLFMVHYPPFVLYYKGNINLLNDLTKKRL 87 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +V +S Y + TL + +T+ A + N I + G Sbjct: 88 YLVDE-MNSEYSKEILSKNIRTLTENSILVTNSYAS--EKHLIDEFKNANASIIYIAKEG 144 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L ++ + + ++S++P+D P NF + N + + ++ +++ + Sbjct: 145 L-------NSSKFDDINLENNLIISQYPIDDHPRKINFRQSNVLSAAIANSLVIFSSYKD 197 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 S L G+++ PG + +G + LI+ GA L+T+ + + Sbjct: 198 SKVNNLVSEFLNLGKDINCFPGSLDEK--DGNNHLIQSGANLITQIQAV 244 >UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma florum RepID=Q6F0T0_MESFL Length = 259 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 17/261 (6%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + + ++ I + YP L P Sbjct: 5 LLYFSLKYHGDWEKIYDALDRKEKIETQDLIKVPNSIPNNFISIINPLYPNNLKQIMKPP 64 Query: 94 GALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 L+ G + L + + + S Y + + E L TI D Sbjct: 65 FILYYLGNISLLQNYFQTIFINSSDNIDEYNFKVIKQVVEDLIKENRTILLSCENSQDNK 124 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP-R 210 ++ G I V L + ++ ++SE+ + NF + Sbjct: 125 LLDFIIEKQGKLIVVTKEPLQSFLNSESWAKHKNIEYYDFIIISEY-----EESNNFKYK 179 Query: 211 RN--------RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 N RII+GLSK ++ +E + L + + FA+P + + S Sbjct: 180 SNNNKEEMNIRIINGLSKAIIFLEHSNFKKIEPLFNAVLNENKPYFAIPQNLKDTESS-S 238 Query: 263 HWLIKQGAILVTEPEEILENL 283 + L+K GA L+ +IL + Sbjct: 239 NNLLKNGAKLLESATDILNQI 259 >UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D330_9BACE Length = 381 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 79/217 (36%), Gaps = 22/217 (10%) Query: 58 KSIESSLCWLEQPNHHLIPADSE-FYPPQLLATT-DYPGALFVEGELHAL-HSFQLAVVG 114 + L + + +E YP +L P L G+ L ++V G Sbjct: 70 EEAGRILARQQAMGIRTVSFLNEMSYPCRLNELDIFRPILLHGMGDWSLLDMQPLVSVTG 129 Query: 115 SRAHSWYGERWGRLFCETLA-----TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 S S R + + + LA D A + L +G IA++ Sbjct: 130 SPQASPQDVSIAREWGKKYGSGHDGQESCIVVGRLADACDVAAMEGCLDADGHVIAIMEV 189 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN-----RIISGLSKGVLV 224 G + + L ++++GG ++S P RN R+++ L + ++V Sbjct: 190 GFDGV---AMEALCRRIVDEGGLVISTKWFGTPS------GRNLCPCERLMAALCEQMIV 240 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 VE + S+ + A + GRE+ + + + EG Sbjct: 241 VECQQQDESMTVVKEARKLGREIHCMKPIMHDISMEG 277 >UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W2_FRASN Length = 283 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 16/239 (6%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE--LHALHSFQLAVVGSR 116 + L LI +P L P AL+ G L L + +AV G+R Sbjct: 49 DPDQLLDAHAALGWRLICPGDHDWPTSLTPAGPAPLALWAHGHGHLAVLAARAVAVTGNR 108 Query: 117 AHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + + G LAT VT+T+ L+RGI A AA+ ++A+L L T Sbjct: 109 SATPAGLSTAARLAHDLATASPPVTVTATLSRGIARAALTAAVPH-APTLAILVGDLLTD 167 Query: 175 HPRRHARLAASLLEQGGALVSEFPL----DVPPLAYNFPRRN----RIISGLSKGVLVVE 226 H L A++ G +VSE P PP + RRN R+++ L++ LV+E Sbjct: 168 R-APHPELLAAVAAT-GLVVSEIPPLWEPATPPTTRDRGRRNTARARLLATLTQATLVLE 225 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 +A + TAR A GR + +P GN + L + A VT +I +L Sbjct: 226 SAPGGAGIATARAARALGRPLLTIPTLGGNGDAARAL-LRGRLASPVTTAADITAHLPH 283 >UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=2 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKC7_FERNB Length = 374 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 25/223 (11%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M + L L+ +L + + +I + A +++I + + + Q SF ++ Sbjct: 1 MNNEATCVLSLIRT-NLTKEKINKIIN-FASENNI--SISKVLKFDESKFQELFSFSKED 56 Query: 60 IESSLCW-------------LEQPNHHLIPADSEFYPPQLLA---TTDYPGALFVEGELH 103 I+ L + +LI E YP +L + P LF +G Sbjct: 57 IQEVLKAKDNLGNSSFLLEDITSKGIYLITVLDEEYPKKLKENLSIDELPPMLFCKGNTD 116 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L+ +++VGS+ + + + + A G + SG + ID ++ + G + Sbjct: 117 LLNEKHISIVGSKNANEISIEFAKNITKKAAKNGQVVVSGYEKTIDKAIIESTINNGGRA 176 Query: 164 IAVLGNGLNTI-HPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 I +L G+ P + + ++S + + Sbjct: 177 IILLSQGILLFQIPNEYYEYYT---DGNILILSIYTPNSKWDN 216 >UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax=Bacteria RepID=C3RR84_9MOLU Length = 332 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 104/310 (33%), Gaps = 24/310 (7%) Query: 5 EIWLRLMSI-SSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 E WL + I + Q+ ++ ++ + + A+R + S Sbjct: 33 EEWLLIERIIKKKGLKGPASLLS--MNQTELEEILEINEFIAYKMARRIETM--NIFLSV 88 Query: 64 LCWLEQPNHHLIPADSEFYPPQL-LATTD-YPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L LE ++ + +P L P +F G + + ++++G + Sbjct: 89 LNNLEGNGINVTTKYEDNFPKLLTKHLKKRAPLYVFYCGNIELVGE-GISLMGLNKVTKK 147 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV----LGNGLNTIHPR 177 + + + + S A+GID VA AL I+ LG Sbjct: 148 DRAYTKRLVDKAIEDNLIYISNDAKGIDDVALHYALYHGCHCISFVCERLG--------A 199 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + + ++S + N RN + LSK ++V +++ +G+ T Sbjct: 200 KSKDYTRYIKSGQLVMLSAEDPNCYFDVTNAIERNSYVCALSKYQIIVSSSINNGA--TW 257 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 +L+ + P + G L+ G + +++L + F + + + Sbjct: 258 FTSLQNLHNKWTTPLAVEG-LYLGNDRLLDMGVTPIY-IKDVLSDYSFDMIYDRNKKIVE 315 Query: 298 FYSPDQQDVA 307 + ++ Sbjct: 316 DAEVNIDQMS 325 >UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W3_FRASN Length = 283 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 92/252 (36%), Gaps = 27/252 (10%) Query: 49 AQRFL-SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHAL 105 +R +P L + L+ +P L P L+V G +L L Sbjct: 37 WERIAGRYPDIDPGRLLEQATESGWRLVIPGDPDWPATL-DVPGRPLGLWVHGAGDLPGL 95 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATR----GVTITS-GLARGIDGVAHKAALQVN 160 + + G+ A S YG L T+ VT+ + G G D A AA + Sbjct: 96 LRRAVTLTGALAGSAYGRTVAADLATKLTTQPGGESVTVVAHGGGNGTDVAALTAAARRP 155 Query: 161 GVSIAVLGNGLNTIHPRRHARLAA-----SLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 L+T L + GG LVS D P + R ++ Sbjct: 156 AA-----VAVLDTP-----TDLFGQPDLLRTVAAGGLLVSAAAPDANPTPGHVLARIELL 205 Query: 216 SGLSKGVLVVEAALR-SGSLVTARCAL-EQGREVFALPGPIGNPGSEGPHWLIKQG-AIL 272 + L+ +++EA +L A A + R V A+PGPI S GPH L++ G A Sbjct: 206 AALAHATVLIEARASDDDALSVAYTAHFRRRRPVLAVPGPITALASAGPHALLRDGTARC 265 Query: 273 VTEPEEILENLQ 284 VT I +L Sbjct: 266 VTTAGHITAHLP 277 >UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J800_MYCHP Length = 252 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 85/283 (30%), Gaps = 36/283 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E L I++ +I + + Q Q ++ F Sbjct: 1 MNKEEYLAYLSYINNG---KWHQIYNDLKSQ-------------ITCQKTKYADFCSDQA 44 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 N I YP + P L+ G L + + G+ + S Sbjct: 45 IK--------NKSYITIFDSDYPLYCNNVWNPPFVLYYYGNKQLLKHKIIMITGNISISN 96 Query: 121 YG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + F + +G+D + N I +L G+ Sbjct: 97 IIEVKDSIENFSKEYVFCNEAW-----KGLDIQLIDYLISKNKNIIIILACGIEYAKNSL 151 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +SE+P + RNRI + +S ++++ + +S Sbjct: 152 PKKWFDY---SNLLFISEYPSNYHTSKITLKARNRISAAISNYLVLL-SCYKSTMNNLID 207 Query: 239 CALEQGREVFALPGPIGNPGSEG-PHWLIKQGAILVTEPEEIL 280 L G+EV+ L N + LI +GA +T +++ Sbjct: 208 QFLNIGKEVYCLDDTQNNLNEDNFNKNLINEGAGKITSITDLI 250 >UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B148 Length = 341 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 100/280 (35%), Gaps = 18/280 (6%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIE--SSLCWLEQPNHHLIPADSEFYPPQLLAT-TD 91 + Q GL A++ + + +L LE N + E YP L + Sbjct: 63 YDTLTQIIGLDAFTARKIEKRQKLLPDLFYALQNLESQNIGVTTIYEEDYPACLRVLGSK 122 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P + G+L + ++V G + + + + ++ G T+ G ++G++ + Sbjct: 123 MPLVISYIGDLSLSYGVNISVAGPQVMNKTMRHVTKEIMKKVSKEGYTLVVGGSKGVEEL 182 Query: 152 AHKAALQVNGVSIAVLG-NGLNTIHPRRHARLAASLLEQGGALV-SEFPLDVPPLAYNFP 209 A + L NG ++ + + + I RL + L+Q L+ S + Sbjct: 183 ALRTHLTNNGNAVLFVADHMFDKI------RLYSKYLKQNKLLIMSANDPYALFDVTHAL 236 Query: 210 RRNRIISGLSKGVLVVEAALRSG-SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 +N I G+ +V + SG T+ + + + G LI+ Sbjct: 237 DKNLYICGMVFAQVVTGTHIGSGPVWFTSIQNIHSHWTRQLVYETLD---YSGNIRLIEM 293 Query: 269 GAILVTEPEEILEN--LQFGLHWLPDAPENSFYSPDQQDV 306 G T+ E++ + L L + S DQ + Sbjct: 294 GEAHFTD-EDLKSDVTLAEVLDNHETIIKKDDPSIDQMTI 332 >UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHW3_RHOM4 Length = 297 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 84/243 (34%), Gaps = 17/243 (6%) Query: 24 IAHWVAKQSHID----AVVLQQTGLTLRQAQ--------RFLSFPRKSIESSLCWLEQPN 71 + V + + G + FL ++ ++ L L Sbjct: 25 LVRHVGSFEALSSQPPEALRNHLGHRPEGIRLLAQLSNAAFLQKMQEQAKAELATLITKR 84 Query: 72 HHLIPADSEFYPPQLLATTDY--PGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 ++ + +P L A ++ P LF G L L +A++ S + Sbjct: 85 IRVLTPHDDVWPAGLEALPEHQRPFLLFAYGNLELLAQPTVALLARPPISDAAYDRAQDL 144 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNG--VSIAVLGNGLNTIHPRRHARLAASLL 187 L G +G G D K +I V GL+ + P +AA+ L Sbjct: 145 TLHLIEAGCVPVTGALSGFDVALQKLCHNAPRPHPAIMVAHTGLSQLLPPM-RPVAAATL 203 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GG L+S F +++ P +R + + L++ + VE + + A++ R V Sbjct: 204 RAGGLLLSPFLMELRPSDRRDRQRALVQAALAQAAVFVEPRDETPEHMALDWAVQAHRPV 263 Query: 248 FAL 250 F + Sbjct: 264 FGI 266 >UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTB7_ROSS1 Length = 215 Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 59/206 (28%), Gaps = 12/206 (5%) Query: 71 NHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 N + YP L P +F+ G L L + S Sbjct: 2 NIERLHIRDTAYPVALRERLGKRAPEHVFLLGNPELLQYDPLGLFCSTKCPGNIILKTYD 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L V + G ++ L+ I GL + P + + Sbjct: 62 LARALRDARVPVIGGFHTPMEKECLAVLLRGPQPVIVCPARGLEGVRPVT--EVRDGIRA 119 Query: 189 QGGALVSEFPLDV-PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 LVS F A +RNR ++ L+ V AA + R + G+ + Sbjct: 120 GRVLLVSIFAPKQRRATADLADQRNRFVAALASRSFVSHAAPGGKTEALCREMIAMGKTL 179 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILV 273 F + P L+ GA + Sbjct: 180 FTVDAPE-------NANLLTLGAQPL 198 >UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM92_MYCA5 Length = 258 Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 86/263 (32%), Gaps = 44/263 (16%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE 80 +I H ++D + +Q R ++ +I + Sbjct: 16 WDKIYHAFKNFENVDDDL-------AKQIARERIDLKE--------------KIITILDD 54 Query: 81 FYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 YP +L P AL G + G+ Y ++LA V Sbjct: 55 EYPAKLDMLRKPPFALHYLGNYSLINFEKSFCLTGNLEK-DYIVDLLCHI-DSLAK-DVL 111 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL---LEQGGALVSE 196 + +GI+ + L + + + GL R+ + + ++SE Sbjct: 112 VVLPSWKGINEKILEKCLTNDQPILVISKCGL------RNEPFLEKIDFAKHKNVLVISE 165 Query: 197 FPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSL--VTARCALEQGREVFAL-PG 252 +P F R RI++ L+ ++++ SG L+ G+EVF P Sbjct: 166 YPNKYHISRKTIFAYR-RIVAALANNLVLLAT---SGPFLNNLVNNFLDCGKEVFCFAPE 221 Query: 253 PIGNPGSEGPHWLIKQGAILVTE 275 P N S LI GA L+ + Sbjct: 222 PNDNENS--NLELINLGATLIND 242 >UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=spotted fever group RepID=Q92IH0_RICCN Length = 111 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 45/62 (72%) Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA+L+SGSL+TA+ ALEQ R +FA+PG +P +G + LI++GA LV ++I+ NL Sbjct: 2 VVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANL 61 Query: 284 QF 285 Sbjct: 62 PQ 63 >UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium Ellin514 RepID=B9XI03_9BACT Length = 105 Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E + L I + + ++ I + QQ G+ A+ ++ Sbjct: 1 MDSREALVALNMIDHVGPVRVRQLLEQFGNAPAILSASKQQLMRVRGIGEETAECIANWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + + L + H++ + YP L D P Sbjct: 61 KSIDLAGELKRITDYGCHVLTQADDEYPELLRQIYDPP 98 >UniRef50_Q14PF7 Hypothetical dna processing protein smf n-terminal truncated n=1 Tax=Spiroplasma citri RepID=Q14PF7_SPICI Length = 189 Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 27/202 (13%) Query: 88 ATTDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 P LF G L L +LA+ G+ + G ++ + + + +T+ Sbjct: 3 NIYRPPFVLFYVGNLAVLNDQRHKLAICGTTVPNKRGLVTAKMLTKKILKQKITLIVTSE 62 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ-----GGALVSEFPLD 200 G++ K NG SI +L ++ + +Q ++SE + Sbjct: 63 AGVNECVVKNL--GNGSSILIL----------KNLNDYKQITKQYPNTKFQIIISEAYQN 110 Query: 201 V--PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 + I+SGL GV++V++ L + A G+EVF P I Sbjct: 111 SVNKSQYELYL----IMSGLMDGVVIVQSTLDDETHRIVTLAKHDGKEVFCFPAQITVAN 166 Query: 259 SEGPHWLIKQGAILVTEPEEIL 280 + IK GA LV ++I Sbjct: 167 K--NNGFIKNGAQLVENVDDIC 186 >UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding protein n=6 Tax=cellular organisms RepID=Q8TVJ9_METKA Length = 157 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 22/139 (15%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q++V+GS S +A RG + G G+ A + A + G+++ +L Sbjct: 2 QISVIGSGRASEDVLNLAEELGREIARRGHVLVCGGRGGVMEAACRGAREEGGITVGILP 61 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 E + P + RN ++ V+ V Sbjct: 62 G--------------ERRDEANPYVDVVIPTGLGE------ARNALVVRAGDAVIAVAGG 101 Query: 229 LRSGSLVTARCALEQGREV 247 G+L A + G+ V Sbjct: 102 W--GTLSEISLAKKMGKPV 118 >UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-family protein n=1 Tax=Propionibacterium acnes RepID=Q6A9G1_PROAC Length = 165 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALHSF---QLAVVGS 115 + L +E+ + +P L D P LFV G L + V GS Sbjct: 76 LAQRLRMVEESGIATLIPGDAHWPQALDDLGDRAPFILFVRGAASFLARPWNDLVTVTGS 135 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLA 145 RA S YGE LA R + +G A Sbjct: 136 RAASAYGEHVAAELAGDLANRERVLVAGDA 165 >UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Y3_PELCD Length = 154 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 24/154 (15%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + V+G+ + + G GR +A + G GI A + A + G ++ Sbjct: 1 MRQPIIGVIGAASVAAAGYETGRQVGRLIAEANAVLVCGGLGGIMEAACRGACEAGGQTL 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF-PRRNRIISGLSKGVL 223 +L ++ P PL N RN II+ ++ ++ Sbjct: 61 GLLPGP-------------DAVAAN--------PWVTLPLPTNLGHARNVIIAHTAQALI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 VE G+L L+ G+ V AL P Sbjct: 100 AVEGEY--GTLSEMAIGLKLGKPVVALDSWPDLP 131 >UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermoplasmatales RepID=Q6KYW1_PICTO Length = 167 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 30/178 (16%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +H+ + ++G Y E LA + + + G GI K NG+ I Sbjct: 1 MHAINIGIIGGSHTDDYYCSIAYKVGELLAKKNIVVICGGKEGIMECVSKGVSDNNGIVI 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L G + E L P + RN +I S ++ Sbjct: 61 GILP-GNDKT-------------EGNRYLTIAMPTGIGY------MRNFLIVRASDALIA 100 Query: 225 VEAALRSGSLVTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 +E SG+ A A+ +G+ V ++ I ++G LI+ ++PEE +E Sbjct: 101 IEGF--SGTTSEAAFAISEGKTVVSIGDLDIKRKETDG--KLIR-----ASDPEEAVE 149 >UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Streptomyces RepID=Q53755_STRAU Length = 141 Score = 70.6 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 4/124 (3%) Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A GR +PGP + S G H L++ A LVT+ E++E + P+ Sbjct: 1 ARRAQRPGRLTMGVPGPATSGLSAGVHELLRGEAQLVTDAAEVVELVGDIGELAPERRGP 60 Query: 297 SFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +L + ++ + A EV+ +L EL G++ Sbjct: 61 VLARDLLPPDT---VRVLDALPAGRAARLEEITLAAATGTDEVIGRLYELHSLGFVERQG 117 Query: 356 GGYV 359 G+ Sbjct: 118 DGWR 121 >UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Burkholderiales RepID=Q123Q1_POLSJ Length = 168 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 41/177 (23%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R L G+ + SG G+ A + A + GV+I +L Sbjct: 28 GTREC-----EAAYRIASLLGRAGMAVVSGGRGGVMEAASRGAFEAGGVTIGILPEEDTR 82 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + L+ ++ P + RN +I+ S ++ + + G+ Sbjct: 83 C---ANRYLSVAI-----------PTGIGE------MRNALIARSSICLVAIGGGM--GT 120 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 + L+ + VF+L I PG V +I + L++ WL Sbjct: 121 ISEMALGLKWEKTVFSLYEDIQLPG--------------VQTARDIDQLLEWVAAWL 163 >UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED55 Length = 103 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 10/104 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + E+WL L + I + + + + Q Sbjct: 9 KELEVWLSLART--IGPIKFFSILRTHGSLDEVLKYLNRVANDKVYGIQ--------DAR 58 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL 105 + E+ +IPA YP L P + G++ L Sbjct: 59 EEINNAERIGAKIIPACDPDYPDLLRNIPSCPPVITALGDISLL 102 >UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquificales RepID=C0QTX6_PERMH Length = 146 Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 40/181 (22%) Query: 108 FQLAVVG----SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 Q+ V+G +R Y + + LA G + G G+ K A + G + Sbjct: 2 KQVTVIGGSQVNRNSDEYI--FAYKLGKLLAENGCIVVCGGRTGVMEAVCKGAKESGGTT 59 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + ++ + + A + G + +N RN I+ V+ Sbjct: 60 VGIMPS-----YEGYEANPYVDIKINTG------------MNWN---RNPIVVASGDPVI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V G+L A G+ V H + +G I V +PE++LE L Sbjct: 100 AVGGNY--GTLSEIAYAFILGKRVLGYK----------THKI--EGIITVNKPEDVLEFL 145 Query: 284 Q 284 + Sbjct: 146 R 146 >UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH93_9FIRM Length = 124 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK- 58 E WL I + ++ I + + L + + + Sbjct: 3 YEYWLA--GIKEITDLKKQKLREVYGSGKAIYYIEETKLDKLRFLNEKDVAILKNAKKDT 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 +E E+ IP + YP +L TD P AL+V G+L + Sbjct: 61 KLEEKWRKTEEKRIQFIPYFLKTYPEKLKYITDPPYALYVLGQLPDEKRKKCG 113 >UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX88_STRM9 Length = 269 Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 98/283 (34%), Gaps = 23/283 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 W+ L I L D V I H ++ L + L ++ + Sbjct: 3 WINLSRI--LKEDICVEIMKRYDNIFHAIDD-FKKYDLNKTILYKLLKAAKEDDIYYINK 59 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR----AHSWYG 122 + N +I + YP +L+ + ++++ + + S ++ Sbjct: 60 CREENIKIISFKDKNYPKKLIQSGFIFPYIYLKTNIDINKLENILAFSSNYDLIENTKKI 119 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + ++ +T A D K I + N + + ++ L Sbjct: 120 LDNTLDLNDNISLS--LVTETDA---DKYIQKKFSSKKNNMIYI--NSRDFKYIPKYYDL 172 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + L+S P + N + +++G+S + + E+ L S +++ ++ Sbjct: 173 DKDV------LISMSPFEDFRSKNNILKSTCLLAGISDYLYIPESFLTSRAMILSKIMNS 226 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ 284 G+E+FA G +++++ A LV ++I + + Sbjct: 227 MGKEIFA--STSYGNRYLGCNYILRNNIAKLVMSKDDINKEVN 267 >UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B0_THERP Length = 169 Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 29/187 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +AV G + + E LA G+T+ G G+ + A + G +I +L Sbjct: 5 RHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQTIGIL 64 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G + P A ++ P RN ++ + V+ V Sbjct: 65 P-GTD---PSD----ANEWVDH------------PICTGLGEARNVVVVASGRVVIAVGG 104 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL--VTEPEEILENLQF 285 L G+L AL+ GR V AL + L + GA + V PEE + + Sbjct: 105 GL--GTLSEIALALKLGRPVIALRSWPLDAS-----LLSRAGATISEVATPEEAVNQVLA 157 Query: 286 GLHWLPD 292 L P Sbjct: 158 VLSVQPT 164 >UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M7_9DELT Length = 161 Score = 64.1 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +++V+G+ RL LA G I G G+ + A + G +I +L Sbjct: 7 RRVSVIGAGTCDAAVYEAARLLGRLLAGHGCDIVCGGLGGVMAGVCQGAREAGGRTIGIL 66 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 + +VP + RN ++ V+ + Sbjct: 67 PG--------------DDPAAANPFV------NVPIVTGMGIARNVLVVKNGDAVVALSG 106 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 G+L AL+ GR V AL Sbjct: 107 GA--GTLSEIGLALKLGRPVVAL 127 >UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9L0_9CLOT Length = 112 Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 47/139 (33%), Gaps = 35/139 (25%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AVVGSR G+ + L I SG A+G+D Sbjct: 3 VAVVGSRQC---GDLDFFKIKQNLPEDCTEIVSGGAQGVDT------------------- 40 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR-RNRIISGLSKGVLVVEAA 228 LA E+ G +EF D P RNR+I S VL Sbjct: 41 ------------LAKKCAEEYGYRYTEFLPDYATHGRTAPLVRNRLIVDHSDFVLAFWDY 88 Query: 229 LRSGSLVTARCALEQGREV 247 +G+ T ALEQ + V Sbjct: 89 KSNGTRSTLAYALEQDKPV 107 >UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I784_AZOC5 Length = 181 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 22/139 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + ++G + + E A G+T+ +G G+ A + A G++I ++ + Sbjct: 28 VGIIGPKNANPEQETLAEALGRAFAKLGLTLLTGGRMGVMQAASRGAFSAGGLTIGIIPD 87 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G + + P RN I++ + ++ V Sbjct: 88 G--------------EWDTANPYVTVPLATGLGP------ARNAIVARACEALVAVGGEY 127 Query: 230 RSGSLVTARCALEQGREVF 248 G+L + R V Sbjct: 128 --GTLSEMAFGMHFDRLVL 144 >UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rickettsia akari str. Hartford RepID=A8GN14_RICAH Length = 107 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 3/85 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQ-SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 LRL+ ++ + + ID L Q+++ F + + Sbjct: 21 LRLIRSDNIGPKTFCSLIQLFGDAGTAIDNAP--DFSLQGGQSKQIKIFNKSDAAKEMDL 78 Query: 67 LEQPNHHLIPADSEFYPPQLLATTD 91 L++ + +I ++ Y LL D Sbjct: 79 LKKNDTKIITYNAPEYSKSLLEIYD 103 >UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBC8_9RHOB Length = 100 Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 265 LIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 LI+ GA LV ++LE ++ + P S + A E+L +G Sbjct: 2 LIRDGATLVRSGADVLETIRPAPTPQLELPPQSEPRR-LSETAALHSEILNRLGPSPLAE 60 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + V L++LEL G I GG + L Sbjct: 61 NQLIRDLKSAAAIVTPALIDLELEGKITRQSGGLIAL 97 >UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0X3_DESAC Length = 175 Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 24/147 (16%) Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 S +AV+G + + R TLA GV + G G+ + + G I + Sbjct: 10 SPLVAVIGGGTVTAEQYQLARQVGYTLAQAGVDVVCGGLGGVMEAVSRGCREGGGHVIGL 69 Query: 167 L-GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 L GN + +P L P + RN +++ + V+ + Sbjct: 70 LPGNDADDANPWVSYPL---------------PTGLG------HARNMLVAQSAPVVIAI 108 Query: 226 EAALRSGSLVTARCALEQGREVFALPG 252 G+L AL+ GR V L G Sbjct: 109 AGEY--GTLSELAIALKTGRVVVTLEG 133 >UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNM3_METHJ Length = 152 Score = 60.6 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 25/151 (16%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G+ Q+AV+G LA +G+ + SG G+ + + A Sbjct: 2 GDGTRNTGKQVAVIGGSHAGEQDLIHAERVGVLLAHKGIVLLSGGRGGVMEASCRGASNA 61 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G+ + ++ + ++++ RN I+ G + Sbjct: 62 GGMVVGIVPGSEGNSY-------LSAIV----------------KTRMDHARNVILVGSA 98 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFAL 250 V+ + G+L AL+ G V+ + Sbjct: 99 DAVIAIGGEY--GTLSEIAFALKSGIPVYGI 127 >UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root RepID=Q3IU16_NATPD Length = 153 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 53/177 (29%), Gaps = 34/177 (19%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV--SIAVL 167 ++V+G + +TLA G T+ G G+ + A +I +L Sbjct: 3 VSVIGGSSVGDESAAIAESVGQTLAEHGHTVVCGGLGGVMEAVCRGAHNAEPPAETIGIL 62 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 + P RN ++ V+ V+ Sbjct: 63 PG-------------RDRTAAND-------WVTTPIATGLGNARNVVVVRNGDAVIAVDG 102 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 A G+L AL+ GR V L H + G V P E +E ++ Sbjct: 103 AA--GTLSELGHALDLGRPVAGLR----------THDIELDGFQPVETPTEAVEYVE 147 >UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SBE4_FERPL Length = 149 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 22/152 (14%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 Q+ V+GS E LA R I +G G+ + A + G + Sbjct: 1 MPLQVGVIGSGDCYEDVCEIAERVGELLAERKCVIINGGLFGVMEAVSRGAKRKGGFVVG 60 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 ++ P + A + +V + RN II S ++ + Sbjct: 61 IV--------PGKSKEEANKYCD----IVIATNMG--------HARNMIIVHSSDVLIAI 100 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNP 257 G++ AL++G+ V + P+ P Sbjct: 101 GGGY--GTISEMAIALKEGKRVVGIKTPVKLP 130 >UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEG1_MYCFE Length = 177 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 34/179 (18%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSF---PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 I + + G + + ++ + I+ L L+Q I A + +P L Sbjct: 16 ELIIYLSWKYEGNIWKIYEFLKTYKTVAQAKIDEVLNELKQKGIKYITAFDDNFPEILKN 75 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P LF +G + L + + + + + TS ++G Sbjct: 76 YRYSPYVLFYKGNIKILKLLE---------TQNKNEVFIEW--DFENKKILFTSLNSKG- 123 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 I +L G N L + + +++FP P N Sbjct: 124 -----------KSKIIYILDCGFNH--------LNKKINYKKELYITQFPFQTLPSKIN 163 >UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota RepID=O29139_ARCFU Length = 151 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 23/146 (15%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+ V+G+ R E +A +G + +G G+ + K A G+ +A+L Sbjct: 5 QIGVIGAGECDEETYRIAYRVGELIAEKGHVLINGGLGGVMEASAKGAKSKGGLVVAILP 64 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 R L + + RN II S ++ V Sbjct: 65 ---------RKKDLCNDFAD------------IRIATDMGHARNVIIVHSSDALISVGGG 103 Query: 229 LRSGSLVTARCALEQGREVFALPGPI 254 G++ AL++G+ V +L P+ Sbjct: 104 Y--GTISEIAIALKEGKRVASLKPPV 127 >UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICC1_9EURY Length = 155 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 23/143 (16%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + V+G + E +A + SG G+ A K A G++I +L Sbjct: 3 PIIGVIGGSTCEEEICKIAYRVGELIAKNKCILASGGLGGVMLHASKGAKDAGGLTIGIL 62 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G E + P RN ++ + ++ ++ Sbjct: 63 PYGK---------------KEANPYIDIAIPTYYG------LARNHLLVRSADVLIAIDG 101 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 + G+L AL +G+ V AL Sbjct: 102 FV--GTLSEISFALNEGKTVIAL 122 >UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like protein n=5 Tax=Dehalococcoides RepID=A5FRM6_DEHSB Length = 162 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AV+G+ + R + LA R VT+ G G+ A + A G++I +L Sbjct: 11 VAVIGASKANSEEARLAEEVGKELALRQVTLVCGGMGGVMEAACRGASLNGGLTIGILPG 70 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 R A + +VS RN ++ ++ V+ + A Sbjct: 71 N-----SREEANPYVQIP-----IVSSIGF----------ARNIMVVKSAQAVIAIGGAY 110 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ V AL Sbjct: 111 --GTLSEIAYALQIELPVIAL 129 >UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM8_9FIRM Length = 161 Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 24/143 (16%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V+G+ +A G + G G+ A K A G++I Sbjct: 3 QQKYVGVIGAAECGVDVVALAEEVGNVVAKSGSVLVCGGRSGVMEAAAKGARDAGGIAIG 62 Query: 166 VLGNGLNTIHPRR-HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L G + PR ++ + + G RN II+ ++ Sbjct: 63 ILP-GDD---PRSGNSYINFGIATGMG-----------------DARNVIIARTCDVLVA 101 Query: 225 VEAALRSGSLVTARCALEQGREV 247 V + G+L A++ G+ V Sbjct: 102 VTGSY--GTLSEIGLAMKMGKPV 122 >UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding protein n=4 Tax=Bacteria RepID=A5D3K0_PELTS Length = 167 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 26/146 (17%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLA-RGIDGVAHKAALQVNGVSIAVLGNGLN 172 G + + +A G + +G GI + K A G++I +L Sbjct: 3 GGESAPPEDCAAAYRLGQLIAEEGWVLLNGGRPAGIMEASAKGAKDRGGLTIGILPGN-- 60 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 RHA + P + RN I S V+ + + G Sbjct: 61 ---SARHASKYIDI---------------PVVTGMGDARNVINVLTSDAVVALPG--KGG 100 Query: 233 SLVTARCALEQGREVFAL---PGPIG 255 ++ AL+ G++V L PG I Sbjct: 101 TISEVALALKNGKKVVLLNFDPGKIF 126 >UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobacter RepID=B5EDM7_GEOBB Length = 169 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERW-GRLFCETLATRGVTITSGLARGIDGVAHK 154 ++ G L ++A + SR G R + + G + SG ++ Sbjct: 21 MYSIGNEEILMQQKVAFLCSRKV-PQGVAVKARRWADEQRELGRCVISGYHSPLEKAVLC 79 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD-VPPLAYNFPRRNR 213 L I + GL I P A + ++S + P +RN+ Sbjct: 80 RLLLGTQPIIVAMAQGLGRIDP----EWGAHISAGRLLVISRYAESVTHPCESKCYQRNK 135 Query: 214 IISGLSKGVLVVEAALRS 231 ++ L+ V++ A+ Sbjct: 136 MMMDLADQVVIAHASPGG 153 >UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SC37_NOCSJ Length = 94 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL--QFGLHWL 290 + TA R V ALPGP+ + S G H LI+ G A +VT EIL +L + Sbjct: 1 MNTAHWTTNLHRPVLALPGPVTSVASAGVHQLIRLGEASMVTNAPEILNDLIGRPAATAA 60 Query: 291 PDAPENSFYSPDQQDVALP 309 A + Y+P Sbjct: 61 RSAQVDESYAPSPARHTPA 79 >UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT06_CYAP4 Length = 157 Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 22/138 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AVVG+ + LA G+T+ G G+ A + A G +I +L Sbjct: 4 IAVVGAGQCDPETTVLAETVGQELAQAGITLICGGLGGVMAAACRGAKAAGGQTIGIL-- 61 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 P ++A + ++ + RN I+ ++ ++ V Sbjct: 62 ------PGSDPQMANAWVD------------IAIATGMGEARNLILVHTAQALIAVGGEY 103 Query: 230 RSGSLVTARCALEQGREV 247 G+L AL+ G+ V Sbjct: 104 --GTLSEIAFALKLGKPV 119 >UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellular organisms RepID=C7P1D2_HALMD Length = 157 Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 31/147 (21%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ---------VN 160 ++V+G S R E LA RG + G G+ + A Sbjct: 3 VSVIGGSTVSSDEYELARRVGECLAQRGHAVVCGGLGGVMEAVCRGARDGRESTASPGAG 62 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +I +L P A ++ P RN ++ Sbjct: 63 GHTIGIL--------PGERRAAANEYVD------------TPIATGLGHARNAVVVMNGD 102 Query: 221 GVLVVEAALRSGSLVTARCALEQGREV 247 V+ ++ G+L R + Sbjct: 103 AVIAIDGG--GGTLSELGYGHVFDRPI 127 >UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B1I515_DESAP Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 27/165 (16%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + V+G+ S W +A R + G G+ A + A + G+ + VL Sbjct: 4 VGVIGAGLCSSEVSGWAEAVGAGIARRQGVLICGGMGGVMEAAARGARREGGLVVGVLP- 62 Query: 170 GLNTIH--PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G + P LA L + RN +I+ S ++ ++ Sbjct: 63 GNDRKEGNPYLSLSLATGLGD---------------------ARNAVIARASDVLIAIDG 101 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL 272 G+L AL+ GR V L G S+GP I A Sbjct: 102 GY--GTLSEIGLALKMGRPVIGL-GTWRIESSKGPDGGIIAAADP 143 >UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C1DTZ1_SULAA Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 9/76 (11%) Query: 106 HSFQLAVVGSRAH---SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 + + + GS Y R LA +G TI +G GI A++ A + G Sbjct: 34 YQPSVTIFGSARVKEGDKY-YDSARQLGFKLAKKGFTIVTGGGPGIMEAANRGAFEAGGN 92 Query: 163 SIAVLGNGLNTIHPRR 178 SI GLN P+ Sbjct: 93 SI-----GLNIKLPKE 103 >UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CTX3_9BACE Length = 79 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEV--TPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ +++ ++ ++ + + + + + L LE+ G Sbjct: 7 PVSPQVVQRQLFPELTPEEEQVITHLQKHPDGIQINTLVVESNIAINRMTSLLFNLEMKG 66 Query: 350 WIAAVPGGYVRL 361 + A+ GG +L Sbjct: 67 VVRALAGGVYKL 78 >UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP8_9BACE Length = 78 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +A ++ ++ +D++ E +V LL LEL I V Y + Sbjct: 16 LASEEEKVYGSICLIPKSIDIIIEETHLTPLKVCEILLNLELKDMIEQVSHNYYVRK 72 >UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=D0T8Z4_9BACE Length = 159 Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L + A + S S + + G + SG + ++ L+ Sbjct: 7 GNKELLKLKKTAFLASSTISSETVLKCYDWATEMRRHGECVISGFSSKLEQDVLHFLLKG 66 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 + I VL + + P L A + + ++S RNR I +S Sbjct: 67 TQLIIIVLARKMYKVIPAE---LQAPMEQNRLLIIS-VSNATRQSRTTALARNRYICEIS 122 Query: 220 KGVLVVEAALRS 231 + +L V S Sbjct: 123 ERILFVGVTESS 134 >UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6EE78_9SPHI Length = 244 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 97 FVEGELHALH-SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 FV+G + V GS + Y R + LA G I +G GI A Sbjct: 33 FVKGFRTLHFIGPCVTVFGSARFKEDHPY-YELAREISKELAQHGFAIMTGGGPGIMEAA 91 Query: 153 HKAALQVNGVSIA---VLG 168 ++ A + G+SI VL Sbjct: 92 NRGAKEGGGLSIGCNIVLP 110 >UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQW5_METLZ Length = 199 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 29/138 (21%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----NGVSIAVLGNGLNTIHPRR 178 E++ L + G + SG G+ + A G IAVL G + P + Sbjct: 22 EQFAFSLGNALVSNGYRVLSGGLGGVMEAVSRGAHASPAYREGDVIAVLP-GND---PAQ 77 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 A ++ G RN I++ + V+ V SG+L Sbjct: 78 -ANPYTDIVIATGL---------------DHARNFIVAN-TDAVVAVGGG--SGTLSELS 118 Query: 239 CALEQGREVFA--LPGPI 254 A R + A +PG + Sbjct: 119 YAWVMHRLIMAYRVPGVV 136 >UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V9S6_SULSY Length = 225 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Query: 104 ALHSFQLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + + GS + R L+ +G +I +G GI A++ A + +G Sbjct: 32 PNYLPSVTIFGSARVEEGNKYYEAARELAFKLSKKGFSIVTGGGPGIMEAANRGAFEADG 91 Query: 162 VSIAVLGNGLNTIHPRRHA--RLAASLL 187 SI GLN P+ + +L Sbjct: 92 NSI-----GLNIKLPKEQKPNKYLTEIL 114 >UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5E9I6_BRASB Length = 150 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 45/147 (30%) Query: 107 SFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 S + +VGSR S F +L + SG A+G+D A +AA + ++ Sbjct: 5 SKVVGIVGSRHFPS---RALVESFVTSL-PCDTCVVSGGAQGVDTWAIEAARSLGLPTLI 60 Query: 166 VLG----NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 + +G P R+A L + E I+ G Sbjct: 61 IQADWKRHG-RKAGPLRNAELVRRVDE--------------------------IAAFWDG 93 Query: 222 VLVVEAALRS-GSLVTARCALEQGREV 247 RS G+L T AL G V Sbjct: 94 --------RSRGTLNTVMLALRAGLPV 112 >UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XIX5_9BACT Length = 227 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 108 FQLAVVGS-RAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + GS R + Y + LA + + +G GI A++ A + +G SI Sbjct: 36 PGVTIFGSARTPARNPY-YQATVTLARGLAKHNLAVITGGGPGIMAAANRGASRAHGKSI 94 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 GLN P LEQ G L + ++P + F R Sbjct: 95 -----GLNIELP----------LEQKGNLYT----NIPINFHYFFAR 122 >UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobacillus sp. WCH70 RepID=C5D816_GEOSW Length = 184 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 21/128 (16%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 +A R + +G G+ A K A + G+ I +L + I + Sbjct: 18 RHVAEEVGAEIAKRNAVLLTGGGSGVMEAASKGAKEAGGLVIGILAG--DRI------DV 69 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A ++ P+ +F R+ I+ S ++++ +G+L A Sbjct: 70 ANDYID--------IPITTG---LHFDFRSLILVHSSDALIMIRGG--NGTLGELSAAYM 116 Query: 243 QGREVFAL 250 + V + Sbjct: 117 NKKPVIII 124 >UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular organisms RepID=B1WX38_CYAA5 Length = 166 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 48/132 (36%), Gaps = 23/132 (17%) Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 + + + + +A + + +G G+ A+K A + G++I +L + Sbjct: 15 SATEIDIKNAYELGKLIAQQDWILLTGGRNVGVMDAANKGAKEAGGLTIGILPSNHTK-- 72 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 + A + A+++ N RN I S ++V + G++ Sbjct: 73 ---NVSDAVDI-----AILT--------DLGN--ARNNINVLSSD--IIVACGIGLGTVS 112 Query: 236 TARCALEQGREV 247 AL+ + V Sbjct: 113 EIALALKNRKPV 124 >UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C515_SPHTD Length = 175 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 22/139 (15%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +AV G + RW E +A G + G G+ A + A + G +I +L Sbjct: 1 MIAVCGPNEATDEEIRWAEEVGERIALAGHALVCGGRDGVMAAACRGARRAGGATIGIL- 59 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 P R A +E RN ++ + V+ + Sbjct: 60 -------PGTDRREANEWVEHVIC------------TGLGNARNAVVVASGEAVIAIGGG 100 Query: 229 LRSGSLVTARCALEQGREV 247 G+L AL+ G+ V Sbjct: 101 F--GTLSEIALALKMGKHV 117 >UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003826D2 Length = 207 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 2/60 (3%) Query: 108 FQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++V GS L G + +G GI A+K A + G+SI Sbjct: 81 PAVSVFGSARTKPDHADYALAEDVGRLLVDEGFAVITGGGPGIMEAANKGASEAGGLSIG 140 >UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax=Thaumarchaeota RepID=A9A3J4_NITMS Length = 169 Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Query: 107 SFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 Q+ V+G+ + E+ +A + +G GI A + A +G+++ Sbjct: 4 KRQILVIGNNTNGCTPEHEKIAYDIGVEIAKSDSVLITGGLGGIMTAASRGAKDTDGLTV 63 Query: 165 AVLG 168 ++ Sbjct: 64 GIIP 67 >UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacteria RepID=D0MG69_RHOM4 Length = 247 Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 9/74 (12%) Query: 108 FQLAVVGSRAHSWYG---ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS + G R L G + +G GI A+K A + GVS+ Sbjct: 59 PCVSIFGSAR-TPRGHRYYRMAEAVGRCLVEHGFGVITGGGPGIMEAANKGAKEAGGVSV 117 Query: 165 AVLGNGLNTIHPRR 178 GLN + P Sbjct: 118 -----GLNIVIPHE 126 >UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q0A4N6_ALHEH Length = 241 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 107 SFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 ++V GS R + + L+ G ++ SG GI A+K A SI Sbjct: 45 KPSVSVFGSARTAPDHPYYKLAEDLSRALSDAGFSVVSGGGPGIMEAANKGAHGGKSPSI 104 Query: 165 AVLGNGLNTIHPRR 178 GLN P Sbjct: 105 -----GLNIQLPHE 113 >UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=prokaryotic environmental samples RepID=B3T5D8_9ZZZZ Length = 190 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 46/159 (28%), Gaps = 28/159 (17%) Query: 97 FVEGELHALHSFQLAVVGSRAHS--WYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 FV+G H +AV GS S ++ T+ G + G G+ K Sbjct: 10 FVDGVGSMSHRPTVAVFGSNDLSDSPDVQQLCEDLGRTIVDLGCRVACGGLGGVMSAVCK 69 Query: 155 AALQV----NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 A G +I +L G + P + Sbjct: 70 GARSSARYTEGDTIGILPMG--------------DFESANEFIDVIIPTGLG------LF 109 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 RN +++ + V+ G+L A + + V Sbjct: 110 RNMLVARAGDACIGVKGGA--GTLSEIAFAWQIKKPVAV 146 >UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RRF1_9MOLU Length = 82 Score = 47.5 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + +I+ + + I + YP L P Sbjct: 9 LYYFALKYNGDFDKIYSSLRTREKFNIDEFIRLKIDIQYQHITILDDKYPNYLKGVESPP 68 Query: 94 GALFVEGELHA 104 ALF EG L+ Sbjct: 69 FALFYEGNLNL 79 >UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX44_DEIRA Length = 256 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 7/82 (8%) Query: 101 ELHALHSFQLAVVGS-RAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + L + V GS R + + L G + +G GI A++ A + Sbjct: 47 RMAHLSVPLVTVYGSARTALTDRYYGLAQTLGRELVGAGFGVVTGGGPGIMQAANQGAYE 106 Query: 159 VNGVSIAVLGNGLNTIHPRRHA 180 GVS+ GLN + P Sbjct: 107 AGGVSV-----GLNIVLPHEQR 123 >UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BV32_9PROT Length = 242 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 8/82 (9%) Query: 108 FQLAVVGS-R-AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS R S + L+ G I +G G+ A K A SI Sbjct: 47 PAISFFGSARSKPSDKFYKLSEEIAFKLSESGFNIITGGGPGLMEAASKGAFNGKSKSI- 105 Query: 166 VLGNGLNTIHPRR-HARLAASL 186 GLN I P+ + + Sbjct: 106 ----GLNIILPKEQNPNPYQDI 123 >UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YM75_NOCDA Length = 257 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 20/45 (44%) Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 LL V D V V+ +A G V L ELE AG + GG Sbjct: 6 LLDAVTDGVQRVEDLARELGISPSTVRRGLGELERAGKVVRTHGG 50 >UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWI1_THEON Length = 315 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV-PGG 357 + + + +++A + + +AE+ G +V L E+E G I V G Sbjct: 248 REKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLITRVKEGR 307 Query: 358 YVRL 361 R+ Sbjct: 308 TYRI 311 >UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHN5_LIBAP Length = 95 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + ++ + +D + G P V LLEL+LAG + P G V L Sbjct: 35 ERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSL 87 >UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax=Bacteria RepID=C2FUF1_9SPHI Length = 233 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 108 FQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS R + + + L RG + SG GI A+K A + G S+ Sbjct: 45 PCVSIFGSARTPREHKYYQMAVDIGKLLTERGYGVISGGGPGIMEAANKGAYEAGGKSV- 103 Query: 166 VLGNGLNTIHPRR 178 GLN P Sbjct: 104 ----GLNIELPFE 112 >UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ49_9RHOB Length = 77 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 22/64 (34%) Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + D A E+L +G D + + V + +LE+ G + Sbjct: 6 ETPAPEARDPAQTAALHREILDRLGPAPIAEDQLIRDLSRAARHVTPAITQLEMQGRVRR 65 Query: 354 VPGG 357 GG Sbjct: 66 QAGG 69 >UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZQ2_9AQUI Length = 69 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D+ ++L ++ + T D + E+ P +++T L LEL I G Sbjct: 10 LPDLDEIEKQILDSIENN-THFDNLLEKLSIPADQLITILFNLELKNLIKNENG 62 >UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1IJ66_ACIBL Length = 275 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 84 PQLLATTDYPGALFVEG-ELHALHSFQLAVVGSRAHSW--YGERWGRLFCETLATRGVTI 140 +L +D FV+G + + V GS G LA G + Sbjct: 66 ERLKRISDE----FVQGFDKLYGVGPAVTVFGSARFHEGHKYYDLGCEVGRELAKAGFAV 121 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 +G G+ A++ A + G S+ GLN I P Sbjct: 122 LTGGGPGMMEAANRGAKEAGGASL-----GLNIILPFE 154 >UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ2_9CLOT Length = 173 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 18/134 (13%) Query: 128 LFCETLATRGVT-ITSGLARGIDGVAHKAAL----QVNGVSIAVLGNGLNTIHPRRH--A 180 + GVT +G+A G+D A + L NG++ L P Sbjct: 37 EIIRQIEENGVTHFITGMAIGVDMFAAEIVLGLKSAYNGIT-------LECAIPCETQAE 89 Query: 181 RLAASLLEQGGALVS----EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + +L ++ + S E L +RNR + + ++ V SG+ T Sbjct: 90 KWSEALRDRYFDIASKCDKETLLQQRYTPDCMHKRNRYMVDQADYIIAVWNGKPSGTGKT 149 Query: 237 ARCALEQGREVFAL 250 + A +QG+ V + Sbjct: 150 VQYAQQQGKPVRVI 163 >UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria RepID=Q2LWS8_SYNAS Length = 219 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 YG+ + LA +G ++ +G GI A+K A + G S+ Sbjct: 57 YGK--AEYLAKRLAEKGFSVITGGGPGIMEAANKGAAEAGGKSVG 99 >UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=22 Tax=Cyanobacteria RepID=A5GUK3_SYNR3 Length = 170 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 2/82 (2%) Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIA 165 ++A++G+R L +L G ++ + A+GI+ A + AL Sbjct: 28 QRRIAILGTRHVPVVSIHLVELLARSLVQEGHSMLTSGAQGINAAAIRGALAVDPAKLTV 87 Query: 166 VLGNGLNTIHPRRHARLAASLL 187 +L L P L +L Sbjct: 88 ILPQSLEQQAP-ESQELLEQVL 108 >UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KW25_9GAMM Length = 236 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V GS S R + LA G+ + +G G+ A++ A + GVS+ Sbjct: 54 PAVTVFGSARSSPDSWEARAAGVLGGHLARAGIPVITGGGPGVMEAANRGAHEQGGVSV- 112 Query: 166 VLGNGLNTIHPRR 178 GLN P Sbjct: 113 ----GLNIELPTE 121 >UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUC5_9BACE Length = 155 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 16/135 (11%) Query: 124 RWGRLFCETLATRGVT-ITSGLARGIDGVAHKAALQVNGVSIA-----VLGN---GLNTI 174 E LA GVT SG+A G+D A A L + G + A +L Sbjct: 6 ALTEQI-EQLARNGVTQFLSGMAEGVDTWAALAVLALRGKNDALKLHCILPCREQAEQWS 64 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL-VVEAALRSGS 233 P + + S+LEQ S ++ RNR + S +L V R G+ Sbjct: 65 APAQ--EMYRSILEQA---DSVVYVNRDYRKDCMLERNRFLVEHSDILLAVYNGERRGGT 119 Query: 234 LVTARCALEQGREVF 248 T R A + GRE++ Sbjct: 120 AATIRYARKAGREIW 134 >UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellular organisms RepID=C6MAL3_NEISI Length = 252 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 107 SFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS R + + L+ G ++ SG GI A+K A ++ Sbjct: 56 QPAVSIYGSARTPENHPDYEFTLRLARKLSDAGFSVISGGGPGIMEAANKGAFAGASPAV 115 Query: 165 AVLGNGLNTIHPRR 178 GLN + P Sbjct: 116 -----GLNIVLPHE 124 >UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VJ80_9BACT Length = 154 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 5/142 (3%) Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G L + A + S + + + +RG I SG ++ L Sbjct: 7 YLGNQELLKQQKTAFLASSNIATETVLQVYDWATEMRSRGDCIISGFNSKLEQDVLHFLL 66 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + + I V+ + P L ++ + ++S RN+ I Sbjct: 67 KGSQPIILVIARKMYKTIP---THLQTAIKQNRLLIIS-ISNSTRQSKATALERNKYICH 122 Query: 218 LSKGVLVVEAALRSGSLVTARC 239 L++ +L +S SL T + Sbjct: 123 LAEKILFAGVTEQS-SLYTLQY 143 >UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6Y2_9BACT Length = 237 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 7/79 (8%) Query: 102 LHALHSFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + + +AV GS R + R L G + +G GI G A++ A + Sbjct: 41 MSRMPDNLVAVFGSARTPEDSPDYQAARQTGAMLVKAGYGVITGGGPGIMGAANRGAKEA 100 Query: 160 NGVSIAVLGNGLNTIHPRR 178 G +I GLN P Sbjct: 101 GGRAI-----GLNIELPME 114 >UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YWX8_NOCFA Length = 294 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Query: 296 NSFYSPDQQDVALPFPELLANVG--DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + E+L + E PV +AER G L EL+LAGW Sbjct: 5 QTGAARSPSPPTRRVVEILTLLAGAAEPLPVAAIAERLGIARATATAVLAELDLAGWAVR 64 Query: 354 VPGGYVRLRR 363 VP RL Sbjct: 65 VPDRGYRLGP 74 >UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylobacter RepID=B9D5I3_WOLRE Length = 209 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 10/76 (13%) Query: 107 SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG-V 162 + + GS S Y + + LA G + SG G+ A+K A + Sbjct: 30 NPSVTFFGSARFDESSKY-CKMAFSLAKELADGGFAVVSGGGPGVMEAANKGAYESGKSP 88 Query: 163 SIAVLGNGLNTIHPRR 178 SI GLN + P Sbjct: 89 SI-----GLNIVLPFE 99 >UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chlorobiaceae RepID=B4SEQ5_PELPB Length = 245 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Query: 108 FQLAVVGSRAHSWYGERW--GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +AV GS + LA G ++ +G G+ A+K A GVSI Sbjct: 57 PAVAVFGSTRVPAESAEYLLAERLGSLLAAEGFSVITGGGPGVMAAANKGAQGAGGVSIG 116 Query: 166 V 166 Sbjct: 117 F 117 >UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3P8_9DELT Length = 158 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 27/146 (18%) Query: 110 LAVVGSRAHSWYGE-----RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 ++V+GS E LA G + G G+ A K A + G +I Sbjct: 6 VSVIGSGQCGPNSEGRALYAAAVELGGLLARNGYVVVCGGLGGVMEGACKGAREAGGRTI 65 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L P A + +E +P P RN ++ ++ Sbjct: 66 GIL--------PSSDRTTANAWVE------------IPIATGLGPMRNMLVVTNGDVIVA 105 Query: 225 VEAALRSGSLVTARCALEQGREVFAL 250 V G+L A + G+ V A+ Sbjct: 106 VGGGF--GTLSEVALARKTGKPVVAI 129 >UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protein n=3 Tax=Sphingobacteriales RepID=C5PUJ3_9SPHI Length = 251 Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 8/80 (10%) Query: 97 FVEGELHALH-SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 F++G + V GS + Y R ++ G TI +G GI A Sbjct: 36 FIKGFRALHFIGPCITVFGSARFKEDHPY-YALARKVSAEVSRLGFTIMTGGGPGIMEAA 94 Query: 153 HKAALQVNGVSIA---VLGN 169 ++ A G S+ VL + Sbjct: 95 NRGARDAGGPSVGCNIVLPH 114 >UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorobiaceae RepID=B3EM50_CHLPB Length = 235 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 27/136 (19%) Query: 110 LAVVGSRAHSWYGERWGR--LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +A+ GS S + + LA G + +G G+ A+ N + ++ Sbjct: 31 VAIFGSARISEEDREYLDVFAIAKALAESGFDVVTGGGPGLMNAANAGHKSANSPTHSI- 89 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFP---LDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P E P LD+ F R LS ++V Sbjct: 90 --GLNIRLPHE-----------------EMPSPYLDIKQDFNRFSSRLDTFMALSDAIIV 130 Query: 225 VEAALRSGSLVTARCA 240 + G+L+ A Sbjct: 131 APGGI--GTLLELFYA 144 >UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7ABK9_THEAQ Length = 232 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 32/160 (20%) Query: 218 LSKGVLVVEAALR-SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 LS +V+E+ GSL+ A VF G + + + G + GA E Sbjct: 85 LSFASVVLESRWALVGSLIGAG-------VVFW--GNLTS-MALG--LAHRAGA----EA 128 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQ--------------DVALPFPELLANVGDEVT 322 +E+ E + P + + ++ L + Sbjct: 129 KEVAEVHAPKVAPAPREEALPHRVLNGESGPAGEAVGEVGGLELDDRDQRLFQALRTGPK 188 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 V+A G V+ +L LE G + G RL+ Sbjct: 189 GPSVLARELGVSPSTVLYRLKRLEGLGLVEK-ADGVYRLK 227 >UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacteria RepID=A8FW12_SHESH Length = 249 Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 7/72 (9%) Query: 109 QLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +++ GS + LA G +G GI +K A + S+ Sbjct: 55 AISIFGSARVTPDNIYYEKAEQLARRLAQEGFATITGGGPGIMEAGNKGANENQAKSV-- 112 Query: 167 LGNGLNTIHPRR 178 GLN P Sbjct: 113 ---GLNIDLPME 121 >UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G407_9DELT Length = 179 Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 26/176 (14%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGV----AHKAALQVNGVSIAVLGNGLNTIHPRR 178 E RG I G G+ A ++A G + +L L+ P Sbjct: 12 MALAAELGEACVDRGWRIVCGGLGGVMRAVGEGARRSARASGGDVVGLLPT-LD---PST 67 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + P + RN ++ S G +VV +G+L Sbjct: 68 ----------ANPFVDVAIPTGLQ------HGRNTLVV--SSGDVVVALGGGAGTLSELA 109 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 A + + + AL G G + L + + + E + E + L +P Sbjct: 110 LAWQMDKPIVALTGEPGWAATLAGQALDHRRSDRIHEAATVDEAVDRVAELLKKSP 165 >UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms RepID=B9P9D8_POPTR Length = 315 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 9/75 (12%) Query: 107 SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 +++ GS R S Y ++ + G + SG GI A+K A S Sbjct: 119 RPAVSIYGSARLREDSPYYQKTIE-IARLFSDAGFAVISGGGPGIMEAANKGAHAGKSAS 177 Query: 164 IAVLGNGLNTIHPRR 178 + GLN P Sbjct: 178 V-----GLNIELPHE 187 >UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protein n=18 Tax=Francisella RepID=Q0BL10_FRATO Length = 237 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 108 FQLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS S + ++L+ G + +G GI +K A Q + SI Sbjct: 46 PAISIFGSARISKDDRYYKDTVELAKSLSDHGFAVITGGGPGIMEAGNKGAQQGSCSSI- 104 Query: 166 VLGNGLNTIHPRRHA 180 GLN P Sbjct: 105 ----GLNITLPHEQR 115 >UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNF2_9GAMM Length = 223 Score = 43.3 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R R + +A GV++ +G G+ ++ A +G SI Sbjct: 41 PAVSIFGSARVNEDSWEYRSARALGQLMADAGVSVITGGGPGVMEAGNRGARSGDGRSI- 99 Query: 166 VLGNGLNTIHPRR 178 GLN PR Sbjct: 100 ----GLNITLPRE 108 >UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 Tax=Mycobacterium tuberculosis complex RepID=A1KLI6_MYCBP Length = 207 Score = 43.3 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 22/61 (36%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+ V GS +A +G + SG G + + A +G+ + VL Sbjct: 28 QIGVFGSGTIGPRVYELAYQVGAEIAKQGHILISGGMTGTMEASSRGASDADGLVVGVLP 87 Query: 169 N 169 Sbjct: 88 G 88 >UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8L6_SPHTD Length = 280 Score = 43.3 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Query: 97 FVEG-ELHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG + A + ++ GS R L+ G I +G GI A+ Sbjct: 67 FVEGFDALARVTQGVSFFGSSRIDESDPMYAAARALAFDLSRAGFAIITGGGPGIMEAAN 126 Query: 154 KAALQVNGVSIA 165 + A G+S+ Sbjct: 127 RGAHDAGGLSVG 138 >UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFS3_DESAA Length = 310 Score = 43.3 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP---GGYVR 360 + ++LA + V +A+ G +V L LE AG + P G + R Sbjct: 249 LYNKEEQILATIRRRPCTVQDLAQALGMHEAQVRKHLAGLEQAGKVVLQPQTRGMFYR 306 >UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A3N5_THESM Length = 170 Score = 42.9 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 48/133 (36%), Gaps = 25/133 (18%) Query: 120 WYGERWGRLFCETLATRGVTIT--SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + F + LA T+ +G GI +A + + G+ + +L R Sbjct: 16 PKAVEKTKEFIKELAKYKDTVVLLTGGRGGIMEIASREFARFGGLVVGILPE-------R 68 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + ++ + G +F R+ I+ + ++V+ + G++V A Sbjct: 69 QKGNEFNTIRIKTGM--------------DFAERSAIMINSADVLVVLGGGI--GTMVEA 112 Query: 238 RCALEQGREVFAL 250 A + + + + Sbjct: 113 LMAYDYSKVLVVV 125 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 4/55 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFPRKSI 60 L I + + H I+ L + G++ A+R + Sbjct: 644 LQEIPGIGPSRKRALLHHFGTLKEIERASLGDLGKVPGISAESAKRIFDYFHPQP 698 >UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SPW3_NOCSJ Length = 156 Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 1/66 (1%) Query: 105 LHSFQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG + LA G + +G G+ G A + A G + Sbjct: 3 LTRRYVAVVGPADGARPTDLEHAEAVGRMLAEHGAIVLTGGHHGVMGAAARGARTGGGTA 62 Query: 164 IAVLGN 169 I ++ Sbjct: 63 IGLMPG 68 >UniRef50_D2NQ58 Predicted transcriptional regulator n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NQ58_9MICC Length = 491 Score = 42.5 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 20/62 (32%) Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + ++++ ++ + V +AE +V L +L G + Sbjct: 414 EVSSPPQRAEIPENLSPTESQVYVALTRGPATVADIAENTELSTRQVRYALPKLIQRGLV 473 Query: 352 AA 353 Sbjct: 474 EQ 475 >UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococcus RepID=Q5HR58_STAEQ Length = 188 Score = 42.5 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 126 GRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGNGLN 172 + +A +G + G + GI G L+ G +I V+ L+ Sbjct: 22 AYELGKYMAEQGYELVFGAGSVGIMGAIQDGILEHGGKAIGVMPKMLD 69 >UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBD0_LARHH Length = 185 Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 22/147 (14%) Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 + +A+VG R + E LA G+T+ G G+ A + A G+ Sbjct: 21 PLRLAQPVAIVGPREATPEQEAVAYRLALALAGAGLTLVCGGKIGVMQAAARGARDAGGI 80 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 + +L L P + RN +++ + + Sbjct: 81 CVGLLPE--------------EEAAHGNPFLTVALPTGIG------LSRNMLVARSAACL 120 Query: 223 LVVEAALRSGSLVTARCALEQGREVFA 249 + V L G+L AL+ + VFA Sbjct: 121 VAVGGGL--GTLSEIAMALQWKKPVFA 145 >UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermoproteaceae RepID=A3MWN8_PYRCJ Length = 248 Score = 42.5 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 310 FPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG---YVRLRRAC 365 E+ A V +AE G P ++ T L +LE G +A GG R R Sbjct: 17 EAEIYVALVEQGPKSARELAEALGIPYTKIYTYLYKLENLGVVAKEGGGRPYRYRARPPA 76 Query: 366 HV 367 V Sbjct: 77 EV 78 >UniRef50_A2SSU9 Transcriptional regulator, ArsR family n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SSU9_METLZ Length = 217 Score = 42.5 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 36/88 (40%) Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAER 330 L+ E+++ENL+ + + + + ELL + +++ Sbjct: 113 RLLDSREKLIENLEAVEKDIDEMMGDVIVNGRTVFQNNIEAELLLALVYAPLTPIELSDT 172 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGY 358 +G+ +PEV L L G++ + G Y Sbjct: 173 SGRSIPEVTAALRSLASKGYVHSEGGRY 200 >UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautilia profundicola AmH RepID=B9L6N5_NAUPA Length = 222 Score = 42.1 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 108 FQLAVVGS-R-AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS R Y L+ +G I +G GI A+K A G++I Sbjct: 40 PAVSIFGSAREKPGHYYYEKATEISRGLSDKGYAIITGGGPGIMEAANKGAKVSIGLNI 98 >UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteria RepID=Q020S9_SOLUE Length = 267 Score = 42.1 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 39/130 (30%) Query: 119 SWYGERWGRLFCETLAT---------RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 S Y E+ R+ + L + SG GI A++ A + G ++ Sbjct: 68 SEYYEQ-ARVLAKMLTEWSVQFTNGTYRFVVCSGGGPGIMEAANRGASEAGGKTV----- 121 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFP-----LDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P +FP D+ + F R + L+K ++V Sbjct: 122 GLNIGLPFE-----------------QFPNPYITPDLSFEFHYFFMRKFWFAYLAKALVV 164 Query: 225 VEAALRSGSL 234 G+L Sbjct: 165 FPGGF--GTL 172 >UniRef50_Q7CRC7 Transcriptional regulator, ArsR family n=4 Tax=Alphaproteobacteria RepID=Q7CRC7_AGRT5 Length = 118 Score = 42.1 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LA +G PV ++ G +P V+ L LE AG I G VR Sbjct: 21 ADPTRRAILARLGGGPAPVMELSAPTGLRLPTVMRHLSVLEEAGLIITSKDGRVR 75 >UniRef50_C8WHR8 Selenocysteine-specific translation elongation factor n=2 Tax=Coriobacteriaceae RepID=C8WHR8_EGGLE Length = 643 Score = 41.7 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 18/66 (27%) Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + ++ A E LA + +G V L LE G + Sbjct: 515 KAGAGARKLEEQAAEQLRETLAAAAGAPPSTGELIASSGLDSSLVHRALGSLEKQGLVRR 574 Query: 354 VPGGYV 359 + + Sbjct: 575 IGADFY 580 >UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBR3_OLICO Length = 249 Score = 41.7 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 17/48 (35%) Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 E + +A+R ++ L+ LE G I G L A Sbjct: 30 SAEPQTLAEIAQRTDLYKSTILRLLVTLEGRGLIVRWSDGRYALGPAA 77 >UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A6P7_9GAMM Length = 220 Score = 41.7 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R + + +A GV++ +G G+ ++ A G SI Sbjct: 41 PAISIFGSARVAEDSWEYRSAQSLGKLMAEAGVSVITGGGPGVMEAGNRGARSGEGRSI- 99 Query: 166 VLGNGLNTIHPRRHARLAA 184 GLN P H +LA Sbjct: 100 ----GLNITLP--HEQLAN 112 >UniRef50_UPI0001976C16 transcription regulator ArsR n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976C16 Length = 201 Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFP-ELLANVGD-EVTPVDVVAERAGQPVPEVVTQ 341 Q D P + + ++ P +L + D E V +AE+ G+ V Sbjct: 9 QPQTPPRRDNPATVTDTNRLKALSHPTRLRILTVMSDTEPVTVGQIAEQLGESAGTVSYH 68 Query: 342 LLELELAGWIAAVP 355 L +LE AG++ P Sbjct: 69 LKQLEKAGFVTQTP 82 >UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonproteobacteria RepID=A6Q9K3_SULNB Length = 315 Score = 41.7 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 63/195 (32%), Gaps = 38/195 (19%) Query: 99 EGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG-------VTITSGLARGIDGV 151 +G+ + A + Y R F + G VT+ +G GI Sbjct: 117 KGDNSDMERELRTTKNLLAKTHY-YDTAREFGRLVGNSGKGPDDARVTLMTGGGPGIMEA 175 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP---LAYNF 208 A++ A V +I GLN P + E + +F Sbjct: 176 ANRGAFDVGAKTI-----GLNITLPYEQYP--------NPYITPELCFRLHYFAVRKMHF 222 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPGSEGPHWLI 266 RR +K ++V G++ L Q R+V +P I S + + Sbjct: 223 LRR-------AKALVVFPGGF--GTMDECFEVLTLVQTRKVDPIP-IIFVGESYWKNMVY 272 Query: 267 KQG--AILVTEPEEI 279 +G V +PE++ Sbjct: 273 FEGFVEEGVIDPEDM 287 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 41.7 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 8/63 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E L I + + + L G++ AQ+ + Sbjct: 630 MTENE----LDGIPGIGPTRKRALLKHFGSAKAVSRAGLSDLRAVDGISAAMAQQIYDWY 685 Query: 57 RKS 59 Sbjct: 686 NDR 688 >UniRef50_B1L3F8 Transcriptional regulator, ArsR family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3F8_KORCO Length = 173 Score = 41.3 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA--VPGGYVRLRR 363 +++ + E + +AER G P + + ELE +G I A V Y R+RR Sbjct: 11 ATETRRKIVKLLAMEPLTLSEIAERLGISQPAALKHIRELESSGIIEAHKVRDQYGRIRR 70 Query: 364 ACHVRR 369 + R Sbjct: 71 CYRIAR 76 >UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEXA_ACIC1 Length = 275 Score = 41.3 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 11/111 (9%) Query: 267 KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE------ 320 + A L T EE + ++ G + + PD+ + +L + D Sbjct: 10 RSQAALTTSSEESPDRVERGGDGVATVTDFPDGPPDETGLTPRQRRILDVIRDSVRRRGY 69 Query: 321 VTPVDVVAERAGQ-PVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRT 370 + + E G V QL+ L+ G++ P RA +R Sbjct: 70 PPSMREIGEAVGLTSTSSVAHQLMVLQRKGFLRRDPNR----PRAVEIRSA 116 >UniRef50_UPI000050FE02 transcriptional regulator, IclR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FE02 Length = 249 Score = 41.3 bits (96), Expect = 0.054, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 2/53 (3%) Query: 310 FPELLANV--GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 E+L+ V D+ V E V L LE G + G R Sbjct: 11 AAEILSLVVKADDPISYTEVVESTELARSTVSRLLSALERNGLVERDGDGLYR 63 >UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=Frankia sp. EuI1c RepID=D1VJF9_9ACTO Length = 165 Score = 41.3 bits (96), Expect = 0.054, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 1/46 (2%) Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 LLA + + G +V L ELE G + P Sbjct: 51 RLLAALEQWGPASQADLGRDTGIDRSDVTGALTELEARGLVERRPD 96 >UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8H7_9NEIS Length = 274 Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 25/86 (29%), Gaps = 5/86 (5%) Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD-----EVTPVDVVAERAGQPVPEV 338 PDAP P D PF LA + V + ++ G P V Sbjct: 7 GRSGPARPDAPRVFPEPPAMHDTDTPFERGLAVIQAFDPCGTPLSVSEIGQKTGIPRASV 66 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRA 364 L L+ G++ L Sbjct: 67 ARCLYTLQQLGFVRPSADKRFALTPK 92 >UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator n=3 Tax=Actinomycetales RepID=A4FKG2_SACEN Length = 256 Score = 41.3 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%) Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + +D +AER G V+ L LE AG++ + RL Sbjct: 11 VLTALATGQQTLDQLAERLGVHKSTVLRLLRTLESAGFVRRDGVHHYRL 59 >UniRef50_A6WH50 Putative uncharacterized protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WH50_KINRD Length = 147 Score = 41.3 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%) Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 +E+ E P+ +F P A ++ + + V+ ER G Sbjct: 59 SQDEVNEGWALVEVVEPEGARGTFEPPAAPLPADTLDRIVGCLHRDPIAFGVLVERTGID 118 Query: 335 VPEVVTQLLELELAGWI 351 V + LL+L+ G Sbjct: 119 VDTLRAGLLQLQKQGRA 135 >UniRef50_Q47Q00 Putative uncharacterized protein n=2 Tax=Nocardiopsaceae RepID=Q47Q00_THEFY Length = 118 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +L V V +A R P+ + L +L G++ + R Sbjct: 43 QPAELEPEHHAILE-VCAAPVSVAELASRTKLPLGVLRILLSDLLDGGYVMVHESQWQRR 101 Query: 362 RRACHVRRT 370 R H RT Sbjct: 102 RPDVHTLRT 110 >UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=A7XFC5_9CAUD Length = 195 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 17/49 (34%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 + A++GSR L+ V SG A G+D K Sbjct: 15 RRCALIGSRKAPSDILIMASTIGRVLSENRVVAHSGGAYGMDNAFMKYY 63 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 41.3 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L + + RI L++ GL R A+ + + Sbjct: 559 LDDLPGVGPVRKRRILEHFGTPQAFLEASLEELEAVPGLPGRVAREIHARLHR 611 >UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkholderia cepacia complex RepID=B1K9C8_BURCC Length = 1518 Score = 40.9 bits (95), Expect = 0.068, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 1/75 (1%) Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEV 338 L L P + + + A + A + G +D +A G P + Sbjct: 1031 LRALHPDARATPALKVPAACAQPWEADAALVDVIRARLTGFGPLTLDAIAAPLGLPPASI 1090 Query: 339 VTQLLELELAGWIAA 353 T L LE G++ Sbjct: 1091 ATALAALEREGYVMR 1105 >UniRef50_C7QG65 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QG65_CATAD Length = 365 Score = 40.9 bits (95), Expect = 0.071, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVG--DEVTPVDVVAERAGQPVPEVVTQLLELE 346 A ++ + D + +L+ + D T VD + ER G V L+ L Sbjct: 8 APAPATTDTPLTADAPALTPAASTVLSLLDAHDGTTTVD-LVERTGLGRSTVTKALVALH 66 Query: 347 LAGWIAAVPGGYVRLRR 363 AG GG+ RR Sbjct: 67 EAGLAVRQEGGHEGTRR 83 >UniRef50_A8U8H9 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8H9_9LACT Length = 148 Score = 40.9 bits (95), Expect = 0.074, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG-----YVRLRRAC 365 +L+ + DE ++ +AE +G + Q+ LE G++ G YV L Sbjct: 42 AVLSFIKDEKISLNELAEHSGLDKSTLSRQVKNLEKKGFVMKESGKDKRFTYVSLPSES 100 >UniRef50_B1YCR8 Putative uncharacterized protein n=2 Tax=Thermoproteaceae RepID=B1YCR8_THENV Length = 279 Score = 40.9 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 20/160 (12%) Query: 215 ISGLSKGVLVVEAALRSG----SLVTARCALEQGREV---FALPGPIGN----PGSEGPH 263 +S +S GV + LR G ++ A+ A E G EV A+P + S PH Sbjct: 108 LSLMSHGVGKIAVDLRGGFERYGVLVAQHAAELGAEVQLIVAVPLRLHGDLVFHSSVPPH 167 Query: 264 WLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTP 323 + + ++ + ++ ++ +G Sbjct: 168 LRERY----IRAAGDVSVQRGPVELREWRPQATTHAECEKPRFTDALAKIAEILGVGEGV 223 Query: 324 VDVVAERAGQPVPEVVTQLLELELA-----GWIAAVPGGY 358 ++ +A ++ V+ L L+L G + +PGG+ Sbjct: 224 LEDLAAQSVLSHSYVLDLLTPLQLGYLAKWGLVRQLPGGW 263 >UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglobus fulgidus RepID=O30253_ARCFU Length = 208 Score = 40.9 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 L +I + ++ + I + + G+ ++A+ F R Sbjct: 157 LTAIPGIGEKKAEKLLDYFGSIQRIANASIAELKRVDGIGEKKAREIYRFFR 208 >UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDH0_KOSOT Length = 574 Score = 40.9 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 8/63 (12%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLE 68 RL I + + ++I ++ ++ RK +E L W + Sbjct: 520 RLDDIPGIGPKRKRALVRAFGSVTNIKKASKEELMKVIK--------NRKVVEQILAWTK 571 Query: 69 QPN 71 + Sbjct: 572 KQG 574 >UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organisms RepID=Y4923_PSEAE Length = 195 Score = 40.9 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 3/67 (4%) Query: 108 FQLAVVG--SRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSI 164 + V S S + LA RG+T+ G A G+ G AAL G I Sbjct: 4 RSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGGEVI 63 Query: 165 AVLGNGL 171 ++ L Sbjct: 64 GIIPQSL 70 >UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=Actinomycetales RepID=A8L2Z0_FRASN Length = 117 Score = 40.9 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + PV+ + E+ G P V L L AG + P G RL Sbjct: 11 DPHRRRVLELLRAGPRPVNELVEQLGLSQPGVSKHLRILREAGLVTVRPDGQRRL 65 >UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYN6_ACIFD Length = 340 Score = 40.9 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 18/93 (19%) Query: 103 HALHSFQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 ++ V GS + LA G + +G GI A + A + Sbjct: 60 PFRTQRKVTVFGSARTHPDEPSYQLAETLGARLAQAGWMVITGGGPGIMEAAARGAGPHH 119 Query: 161 GVSIAVLGNGLNTIHP---------RRHARLAA 184 G+N P H RL Sbjct: 120 -------AFGINIRLPLEQPGDHELAEHGRLLE 145 >UniRef50_D2RWW7 Transcriptional regulator, ArsR family n=2 Tax=Halobacteriaceae RepID=D2RWW7_9EURY Length = 97 Score = 40.6 bits (94), Expect = 0.085, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 3/60 (5%) Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA---AVPGGYVRLRRACHVR 368 E+L + V +AE G V L LE AG + Y RL + +R Sbjct: 14 EILRELSRGPKYVSELAEAVGMDGTSAVHHLSTLEDAGLVEWYMRGNRKYYRLTSSLELR 73 >UniRef50_B8FG12 Transcriptional regulator, ArsR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FG12_DESAA Length = 318 Score = 40.6 bits (94), Expect = 0.093, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +++ + + V+ +A+R V L +LE AG Y + Sbjct: 14 ADPSRLKIVNALLERPQYVEELAQRLDLAVSTTSHHLKKLEAAGLAGKEKEQYYVV 69 >UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=B1JB72_PSEPW Length = 482 Score = 40.6 bits (94), Expect = 0.093, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 33/125 (26%), Gaps = 22/125 (17%) Query: 43 GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS-EFYPPQLLATTDYPGALFVEGE 101 L + + + R+ E + L++ + D P L A Sbjct: 231 SLYENEDEEAARYRRRKQELHIQDLKRFGIQTLLVDEYADIPAILRAIE----------- 279 Query: 102 LHALHSFQLAVVGSRAHSWYG-------ERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 + + GS YG + +L G + +G G+ Sbjct: 280 -EQFLKKTIFISGS--AEEYGDWKKDEALDFIHSLSSSLVKHGYRVVNGFGWGVGSAVIN 336 Query: 155 AALQV 159 AL Sbjct: 337 GALDA 341 >UniRef50_Q1AS97 Putative transcriptional regulator n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS97_RUBXD Length = 216 Score = 40.6 bits (94), Expect = 0.095, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 ++ + VD +A G V L LE G + GG VR R Sbjct: 16 RIVVLLRRASRRVDELARELGLTDNAVRAHLAALERDGVVRQ--GGTVRRGR 65 >UniRef50_D2RR88 Phenylalanyl-tRNA synthetase, alpha subunit n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RR88_9EURY Length = 508 Score = 40.6 bits (94), Expect = 0.097, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 304 QDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + +L DE T VD +AERA P V ELE G +A Sbjct: 1 MQLPEQQVAVLEAASADEATSVDALAERADLPPETVTGAAFELETEGLVA 50 >UniRef50_B8GXP7 Transcriptional regulator, ArsR family n=2 Tax=Caulobacter vibrioides RepID=B8GXP7_CAUCN Length = 121 Score = 40.6 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%) Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 A L+++ + + L + + + Q +L+ +G V +A Sbjct: 6 AGLLSKAQAVARALALTILSHMAEQSETLDAVFQALADPTRRAILSRLGQGPASVGELAA 65 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNV 372 + + L LE +GWI + G VR R +V Sbjct: 66 PHDMALTSFMKHLKILERSGWIVSAKTGRVRTCAIVTDRFADV 108 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium ... 403 e-111 UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SM... 401 e-110 UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 ... 399 e-109 UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacte... 397 e-109 UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Al... 389 e-107 UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium ... 389 e-106 UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacte... 388 e-106 UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Mo... 385 e-105 UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=De... 384 e-105 UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcu... 384 e-105 UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes R... 383 e-105 UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobac... 383 e-105 UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromon... 383 e-105 UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi ... 381 e-104 UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacter... 381 e-104 UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Ta... 381 e-104 UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotener... 379 e-104 UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaer... 379 e-104 UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas au... 378 e-103 UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria Rep... 377 e-103 UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y... 377 e-103 UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding prote... 376 e-103 UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf pos... 376 e-103 UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=He... 376 e-103 UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Ca... 375 e-102 UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculu... 373 e-102 UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Ric... 373 e-102 UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=De... 372 e-101 UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces mari... 372 e-101 UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobac... 371 e-101 UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermac... 371 e-101 UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involve... 369 e-101 UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteob... 369 e-101 UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcace... 369 e-100 UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus... 368 e-100 UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas Re... 368 e-100 UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium... 368 e-100 UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomac... 368 e-100 UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter... 368 e-100 UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces... 366 e-100 UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicro... 366 e-100 UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. ... 366 e-100 UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Provide... 365 1e-99 UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=... 365 2e-99 UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia ... 364 2e-99 UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia ... 364 2e-99 UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7... 363 5e-99 UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatro... 363 6e-99 UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteo... 363 6e-99 UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS ... 362 1e-98 UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerof... 362 1e-98 UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostri... 361 2e-98 UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3... 361 2e-98 UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia R... 361 3e-98 UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister in... 361 3e-98 UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicro... 361 3e-98 UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella ... 361 3e-98 UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacter... 361 3e-98 UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella ko... 359 6e-98 UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium elige... 359 8e-98 UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria Rep... 359 9e-98 UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Per... 359 9e-98 UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alt... 359 1e-97 UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1... 358 2e-97 UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula st... 358 2e-97 UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 358 2e-97 UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Col... 357 4e-97 UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula m... 356 5e-97 UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2... 356 6e-97 UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes R... 356 6e-97 UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomacu... 356 7e-97 UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6F... 356 9e-97 UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella ... 356 1e-96 UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus naso... 356 1e-96 UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria Rep... 355 1e-96 UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia Re... 353 7e-96 UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium ... 353 7e-96 UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteri... 353 8e-96 UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacteri... 352 1e-95 UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteob... 351 2e-95 UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibr... 351 2e-95 UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevi... 351 2e-95 UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Sy... 351 3e-95 UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex de... 351 3e-95 UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involve... 350 4e-95 UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacte... 350 4e-95 UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiob... 350 5e-95 UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivi... 350 6e-95 UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding prote... 350 6e-95 UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candida... 349 8e-95 UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 349 9e-95 UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostri... 349 9e-95 UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacter... 349 1e-94 UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis ... 349 1e-94 UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bac... 348 2e-94 UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostri... 348 2e-94 UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacter... 348 2e-94 UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium ... 348 3e-94 UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Ta... 348 3e-94 UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobac... 347 4e-94 UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus S... 347 4e-94 UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula ba... 346 6e-94 UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium... 346 1e-93 UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga... 346 1e-93 UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas ... 345 1e-93 UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpet... 345 1e-93 UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter R... 345 2e-93 UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiacea... 344 3e-93 UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotro... 344 3e-93 UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalob... 344 4e-93 UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteoba... 343 5e-93 UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium p... 343 7e-93 UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicro... 343 7e-93 UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostri... 343 7e-93 UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteri... 343 7e-93 UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibactera... 343 8e-93 UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium ros... 343 9e-93 UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillu... 342 1e-92 UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Ca... 341 2e-92 UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C... 341 3e-92 UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Po... 341 3e-92 UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 ... 341 3e-92 UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas ... 341 3e-92 UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales ... 340 4e-92 UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella f... 340 5e-92 UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_H... 340 6e-92 UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium... 340 6e-92 UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7M... 339 7e-92 UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2T... 339 8e-92 UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus... 339 8e-92 UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostri... 339 1e-91 UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding prote... 339 1e-91 UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellac... 339 1e-91 UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=... 339 1e-91 UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geoba... 338 2e-91 UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcu... 338 2e-91 UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_4... 337 3e-91 UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogace... 337 3e-91 UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillu... 337 4e-91 UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Ri... 337 4e-91 UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular org... 337 4e-91 UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimo... 336 7e-91 UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rh... 336 7e-91 UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=De... 336 9e-91 UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=... 336 1e-90 UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus... 336 1e-90 UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium ... 336 1e-90 UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteob... 335 1e-90 UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydro... 335 2e-90 UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus... 334 3e-90 UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Co... 334 4e-90 UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchin... 333 5e-90 UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultu... 333 6e-90 UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandens... 331 2e-89 UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteri... 331 2e-89 UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Ca... 331 3e-89 UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 330 5e-89 UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coproco... 330 6e-89 UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacte... 330 7e-89 UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacte... 329 7e-89 UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaeros... 329 8e-89 UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacte... 329 1e-88 UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae... 329 1e-88 UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga l... 329 1e-88 UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 ... 328 2e-88 UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=A... 328 2e-88 UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bactero... 327 3e-88 UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria Re... 327 4e-88 UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobaci... 327 5e-88 UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacter... 326 6e-88 UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepI... 326 6e-88 UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=... 326 9e-88 UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobuty... 325 1e-87 UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular or... 325 2e-87 UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiacea... 325 2e-87 UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding prot... 325 2e-87 UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacte... 324 2e-87 UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algor... 324 2e-87 UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibri... 324 3e-87 UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium ... 324 3e-87 UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecali... 324 3e-87 UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizob... 324 3e-87 UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Rumin... 324 4e-87 UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelag... 323 5e-87 UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobi... 323 7e-87 UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacte... 323 8e-87 UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas ... 322 9e-87 UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococ... 322 1e-86 UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfo... 321 3e-86 UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibri... 321 3e-86 UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 512... 321 3e-86 UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms Rep... 321 4e-86 UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter... 320 4e-86 UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerot... 320 5e-86 UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacte... 320 5e-86 UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexac... 319 7e-86 UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostri... 319 8e-86 UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia bal... 319 8e-86 UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bact... 319 9e-86 UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coproco... 319 1e-85 UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finego... 318 2e-85 UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphing... 318 2e-85 UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacte... 318 2e-85 UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacte... 317 3e-85 UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidet... 317 3e-85 UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. ... 317 4e-85 UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostri... 317 4e-85 UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderia... 316 6e-85 UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=... 316 6e-85 UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=De... 316 6e-85 UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Ch... 316 7e-85 UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ... 316 7e-85 UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobact... 316 1e-84 UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteob... 316 1e-84 UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundu... 316 1e-84 UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Seleno... 316 1e-84 UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira ... 315 2e-84 UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus... 315 2e-84 UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma... 315 2e-84 UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium ... 315 2e-84 UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding prote... 314 3e-84 UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella ... 314 4e-84 UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttle... 313 5e-84 UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding prote... 313 6e-84 UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacte... 312 1e-83 UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminoc... 312 2e-83 UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostri... 311 2e-83 UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus ... 310 6e-83 UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella R... 309 7e-83 UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Ca... 309 8e-83 UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Ro... 309 1e-82 UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Micro... 309 1e-82 UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Bra... 309 1e-82 UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobi... 307 3e-82 UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribac... 306 1e-81 UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacter... 306 1e-81 UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding prote... 305 1e-81 UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranu... 304 2e-81 UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacte... 304 3e-81 UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mo... 304 5e-81 UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria Rep... 304 5e-81 UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia... 302 9e-81 UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Ta... 302 1e-80 UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5... 302 1e-80 UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus ... 302 1e-80 UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=... 302 1e-80 UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibri... 302 1e-80 UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella R... 302 2e-80 UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilu... 302 2e-80 UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus Re... 302 2e-80 UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfov... 300 6e-80 UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia Rep... 300 7e-80 UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding prote... 299 1e-79 UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistip... 299 1e-79 UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacter... 299 1e-79 UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=B... 299 1e-79 UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 298 2e-79 UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxy... 298 2e-79 UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_... 297 3e-79 UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus Re... 297 6e-79 UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga ol... 296 6e-79 UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevote... 296 9e-79 UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacil... 296 9e-79 UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus ... 295 2e-78 UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacill... 294 3e-78 UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Ca... 294 3e-78 UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melani... 294 3e-78 UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia... 294 4e-78 UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 ... 294 4e-78 UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alp... 294 4e-78 UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium ... 294 4e-78 UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis... 294 5e-78 UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispor... 294 5e-78 UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella ... 293 6e-78 UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibri... 293 9e-78 UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobac... 292 9e-78 UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involve... 292 1e-77 UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria Re... 292 1e-77 UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibri... 292 1e-77 UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID... 292 2e-77 UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobactera... 291 2e-77 UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Ru... 291 2e-77 UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula berm... 291 3e-77 UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminoc... 291 3e-77 UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus Re... 290 5e-77 UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E... 289 8e-77 UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella ... 289 1e-76 UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porph... 289 1e-76 UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_D... 289 1e-76 UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus cu... 289 2e-76 UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillu... 288 2e-76 UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bactero... 288 3e-76 UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella Re... 288 3e-76 UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cel... 287 3e-76 UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacteri... 287 3e-76 UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding prote... 287 3e-76 UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces ... 287 5e-76 UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomyceta... 286 7e-76 UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium... 286 7e-76 UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepI... 285 2e-75 UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemma... 285 2e-75 UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales ... 285 2e-75 UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachl... 284 3e-75 UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium j... 284 4e-75 UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho ... 283 7e-75 UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella fl... 283 8e-75 UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding prote... 282 1e-74 UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus ... 282 1e-74 UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus pla... 282 2e-74 UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 355... 282 2e-74 UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisel... 282 2e-74 UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Baci... 281 2e-74 UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=... 281 2e-74 UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobact... 281 2e-74 UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteo... 280 4e-74 UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Coryneba... 279 9e-74 UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatim... 279 9e-74 UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces ... 279 1e-73 UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter... 279 1e-73 UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium l... 279 1e-73 UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyce... 279 1e-73 UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella pa... 279 2e-73 UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyc... 278 2e-73 UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC 277 4e-73 UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus sal... 277 4e-73 UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mu... 277 7e-73 UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho ... 276 8e-73 UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacter... 276 9e-73 UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacil... 276 9e-73 UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU 276 1e-72 UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding prote... 274 4e-72 UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA... 274 4e-72 UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacte... 274 4e-72 UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax... 274 4e-72 UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclass... 273 9e-72 UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax... 273 1e-71 UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma wh... 272 1e-71 UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus rum... 272 2e-71 UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinom... 272 2e-71 UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerov... 271 3e-71 UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conex... 271 3e-71 UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermoph... 270 5e-71 UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Coryneba... 270 8e-71 UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=... 269 9e-71 UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella ... 269 2e-70 UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Ocea... 269 2e-70 UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia deni... 269 2e-70 UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genit... 268 2e-70 UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomyceta... 268 2e-70 UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides... 267 3e-70 UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella... 267 5e-70 UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides... 267 6e-70 UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Ac... 266 9e-70 UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA... 265 1e-69 UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria Rep... 265 1e-69 UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococ... 265 1e-69 UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidi... 265 2e-69 UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas... 265 2e-69 UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propioni... 265 2e-69 UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomyceta... 265 2e-69 UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcace... 265 3e-69 UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oc... 264 3e-69 UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Ato... 264 5e-69 UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevi... 263 7e-69 UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiacea... 263 8e-69 UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillu... 262 2e-68 UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA... 261 3e-68 UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidob... 260 7e-68 UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces c... 260 7e-68 UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collins... 259 1e-67 UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding prote... 258 3e-67 UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS 257 4e-67 UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. ... 257 4e-67 UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostri... 257 4e-67 UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidob... 257 6e-67 UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter... 256 1e-66 UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacte... 255 1e-66 UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID... 255 2e-66 UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella ... 255 2e-66 UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardner... 254 3e-66 UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavo... 254 5e-66 UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydroge... 253 7e-66 UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter... 253 8e-66 UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteri... 252 2e-65 UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcine... 250 5e-65 UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ... 249 1e-64 UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus Re... 249 2e-64 UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pes... 249 2e-64 UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family... 248 3e-64 UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haem... 247 4e-64 UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli sub... 247 4e-64 UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9... 246 1e-63 UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=St... 245 2e-63 UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus Rep... 245 2e-63 UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heli... 244 6e-63 UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longu... 241 3e-62 UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdema... 240 6e-62 UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxoba... 240 6e-62 UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacte... 240 7e-62 UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacter... 239 1e-61 UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothr... 239 2e-61 UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacte... 238 2e-61 UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bact... 238 2e-61 UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clav... 238 3e-61 UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonel... 237 5e-61 UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Lep... 237 5e-61 UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1... 236 1e-60 UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum ... 235 2e-60 UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=... 234 4e-60 UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID... 234 4e-60 UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacter... 233 5e-60 UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostri... 233 6e-60 UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacteriu... 233 9e-60 UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=... 233 1e-59 UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacter... 232 2e-59 UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex... 228 2e-58 UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum... 228 3e-58 UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax... 227 6e-58 UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia ex... 226 9e-58 UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding prote... 226 1e-57 UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacter... 226 1e-57 UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR 225 2e-57 UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinoge... 225 3e-57 UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio ... 223 5e-57 UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding prote... 223 7e-57 UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipe... 223 8e-57 UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escheri... 223 9e-57 UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 T... 222 2e-56 UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacter... 222 2e-56 UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:... 220 7e-56 UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivor... 219 1e-55 UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirill... 219 1e-55 UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 Re... 219 2e-55 UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_R... 218 2e-55 UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protei... 218 2e-55 UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_... 218 4e-55 UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=... 217 5e-55 UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis... 217 5e-55 UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira bifl... 217 5e-55 UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter... 217 7e-55 UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 ... 216 1e-54 UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyroc... 216 1e-54 UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding prote... 214 3e-54 UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepI... 212 1e-53 UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding prote... 212 1e-53 UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1... 212 2e-53 UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetal... 211 4e-53 UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU 208 3e-52 UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinal... 208 4e-52 UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrific... 207 4e-52 UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacil... 207 6e-52 UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii A... 206 9e-52 UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longu... 204 5e-51 UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococca... 203 7e-51 UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium... 202 2e-50 UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae Re... 201 3e-50 UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bac... 200 1e-49 UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacter... 199 1e-49 UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulo... 196 1e-48 UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium Re... 196 1e-48 UniRef50_UPI000169347A DNA processing protein DprA, putative n=1... 195 3e-48 UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteoba... 194 4e-48 UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter ... 194 4e-48 UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidob... 194 5e-48 UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH 194 5e-48 UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter Rep... 193 7e-48 UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A... 193 1e-47 UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding prot... 191 3e-47 UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagi... 190 6e-47 UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisn... 190 6e-47 UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepI... 189 2e-46 UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinoge... 189 2e-46 UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesie... 186 9e-46 UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative D... 186 1e-45 UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding prot... 185 2e-45 UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfi... 185 3e-45 UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vanniel... 185 3e-45 UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-... 181 3e-44 UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammapr... 181 4e-44 UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=ca... 180 1e-43 UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanoba... 179 1e-43 UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammapr... 179 2e-43 UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosu... 178 2e-43 UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bac... 177 4e-43 UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfo... 177 6e-43 UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter ... 173 1e-41 UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candi... 170 7e-41 UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus ... 170 9e-41 UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteri... 169 1e-40 UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YR... 169 1e-40 UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bili... 168 3e-40 UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID... 168 3e-40 UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavoba... 167 6e-40 UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis... 165 2e-39 UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acineto... 164 4e-39 UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfo... 164 5e-39 UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=... 163 1e-38 UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microco... 162 2e-38 UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinel... 156 1e-36 UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma Re... 156 2e-36 UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Vei... 155 3e-36 UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 154 5e-36 UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involve... 152 2e-35 UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesioc... 152 2e-35 UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein ... 152 2e-35 UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involve... 146 1e-33 UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycopla... 145 2e-33 UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobact... 145 4e-33 UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pu... 144 6e-33 UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involve... 143 1e-32 UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfo... 143 1e-32 UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplas... 135 2e-30 UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID... 133 1e-29 UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mo... 132 2e-29 UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involve... 130 1e-28 UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter p... 128 2e-28 UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bactero... 128 2e-28 UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involve... 127 7e-28 UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma... 127 8e-28 UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 125 2e-27 UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma ho... 123 1e-26 UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 T... 122 2e-26 UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax... 114 4e-24 UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax... 114 4e-24 UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Strepto... 113 1e-23 UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 ... 111 4e-23 UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involve... 105 3e-21 UniRef50_Q14PF7 Hypothetical dna processing protein smf n-termin... 98 4e-19 UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium El... 92 3e-17 UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseifl... 88 7e-16 UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquific... 86 2e-15 UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding prote... 85 4e-15 UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobac... 85 5e-15 UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=... 84 7e-15 UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycopla... 84 1e-14 UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermop... 82 3e-14 UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfo... 81 5e-14 UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota ... 81 7e-14 UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus pl... 80 1e-13 UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root Re... 80 1e-13 UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Bur... 78 5e-13 UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfu... 78 6e-13 UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methano... 78 7e-13 UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostri... 76 2e-12 UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermom... 75 4e-12 UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduli... 75 4e-12 UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like pr... 75 5e-12 UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-f... 75 5e-12 UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protei... 74 7e-12 UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiob... 73 2e-11 UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteri... 73 2e-11 UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea l... 72 4e-11 UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellula... 72 4e-11 UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanoth... 71 5e-11 UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1... 70 1e-10 UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Strepto... 69 3e-10 UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=p... 69 3e-10 UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding prote... 68 6e-10 UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like pr... 67 1e-09 UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobaci... 66 2e-09 UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobact... 66 2e-09 UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rick... 65 5e-09 UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular orga... 63 1e-08 UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bactero... 63 2e-08 UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax... 62 3e-08 UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteri... 60 1e-07 UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfuri... 59 2e-07 UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax... 59 3e-07 UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobiu... 59 3e-07 UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacteri... 58 4e-07 UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacter... 58 7e-07 UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteri... 58 8e-07 UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax... 57 9e-07 UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammapr... 56 1e-06 UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinoco... 56 3e-06 UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta pr... 55 5e-06 UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleoti... 55 5e-06 UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protei... 53 2e-05 UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrh... 51 5e-05 UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D... 51 1e-04 UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bactero... 49 2e-04 UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bactero... 49 4e-04 UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candida... 47 0.001 UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermoc... 47 0.001 Sequences not found previously or not previously below threshold: UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfo... 58 7e-07 UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostri... 56 2e-06 UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorob... 55 5e-06 UniRef50_Q254M4 Putative uncharacterized protein CF0492 n=2 Tax=... 54 7e-06 UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevote... 54 8e-06 UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Lari... 54 8e-06 UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A... 54 8e-06 UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms R... 54 8e-06 UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 T... 54 1e-05 UniRef50_Q1MRH8 Predicted Rossmann fold nucleotide-binding prote... 54 1e-05 UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma p... 53 3e-05 UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylo... 52 3e-05 UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteri... 52 4e-05 UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protei... 51 5e-05 UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding prote... 51 5e-05 UniRef50_Q6MD50 Putative uncharacterized protein n=2 Tax=Bacteri... 51 6e-05 UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonprot... 51 7e-05 UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chloro... 51 8e-05 UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria Re... 51 8e-05 UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victiva... 51 9e-05 UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellul... 51 1e-04 UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding prote... 50 1e-04 UniRef50_Q47ZZ4 Putative uncharacterized protein n=1 Tax=Colwell... 50 1e-04 UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacter... 50 1e-04 UniRef50_B2UL52 Putative uncharacterized protein n=1 Tax=Akkerma... 50 2e-04 UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimi... 50 2e-04 UniRef50_A0KCC4 Rossmann fold nucleotide-binding protein-like pr... 49 2e-04 UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protei... 49 2e-04 UniRef50_UPI0001B520AA hypothetical protein ShygA5_29070 n=1 Tax... 49 2e-04 UniRef50_D2QZI7 Putative uncharacterized protein n=1 Tax=Pirellu... 49 2e-04 UniRef50_D0LPT5 Putative uncharacterized protein n=1 Tax=Haliang... 49 2e-04 UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma p... 49 2e-04 UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bactero... 49 3e-04 UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaero... 48 4e-04 UniRef50_A6C3L6 Putative uncharacterized protein n=1 Tax=Plancto... 48 5e-04 UniRef50_B4U9G4 Putative uncharacterized protein n=3 Tax=Aquific... 48 6e-04 UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautili... 48 6e-04 UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congreg... 48 7e-04 UniRef50_A3ZTY0 Putative uncharacterized protein n=2 Tax=Bacteri... 48 9e-04 UniRef50_C4LHU2 Putative uncharacterized protein n=2 Tax=Bacteri... 47 0.001 UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteri... 47 0.001 UniRef50_C8N6B1 Methionyl-tRNA formyltransferase n=3 Tax=Proteob... 47 0.001 UniRef50_C6LDA4 Putative uncharacterized protein n=2 Tax=Clostri... 47 0.001 UniRef50_Q0RCV0 Lysine decarboxylase family protein n=94 Tax=Bac... 46 0.001 UniRef50_C7DH06 Rossmann fold nucleotide-binding protein n=1 Tax... 46 0.002 UniRef50_C7H8R4 Putative uncharacterized protein n=4 Tax=Bacteri... 46 0.002 UniRef50_B5VZV5 Putative uncharacterized protein n=2 Tax=Arthros... 46 0.002 UniRef50_C0VRT6 Putative uncharacterized protein n=2 Tax=Coryneb... 46 0.002 UniRef50_A3ZQ30 Rossmann fold nucleotide-binding protein-like n=... 46 0.002 UniRef50_Q72BV5 Decarboxylase family protein n=8 Tax=Bacteria Re... 46 0.003 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 46 0.003 UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardi... 46 0.003 UniRef50_B9XPZ5 Putative uncharacterized protein n=1 Tax=bacteri... 45 0.003 UniRef50_B9M108 Putative uncharacterized protein n=1 Tax=Geobact... 45 0.004 UniRef50_B3DWL4 3-isopropylmalate dehydrogenase n=1 Tax=Methylac... 45 0.004 UniRef50_Q8TUS6 ERCC4-like helicase-nuclease n=1 Tax=Methanopyru... 45 0.004 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 45 0.004 UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oc... 45 0.005 UniRef50_A0YHC8 Lysine decarboxylase family protein n=3 Tax=Bact... 45 0.005 UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteob... 45 0.005 UniRef50_B1XPM0 Putative uncharacterized protein n=1 Tax=Synecho... 44 0.007 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 44 0.007 UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria ... 44 0.007 UniRef50_C1ZHC5 Predicted Rossmann fold nucleotide-binding prote... 44 0.007 UniRef50_A8RVS6 Putative uncharacterized protein n=4 Tax=Firmicu... 44 0.007 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 44 0.007 UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 44 0.008 UniRef50_Q937Z9 Putative uncharacterized protein n=1 Tax=Mycobac... 44 0.008 UniRef50_B9L9L9 DapE downstream ORF 2 n=1 Tax=Nautilia profundic... 44 0.008 UniRef50_A0L3X5 Putative uncharacterized protein n=1 Tax=Magneto... 44 0.008 UniRef50_D1AD65 Putative uncharacterized protein n=2 Tax=Actinom... 44 0.009 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 44 0.009 UniRef50_Q31PX5 Putative uncharacterized protein n=4 Tax=cellula... 44 0.009 UniRef50_C5EYK0 Putative uncharacterized protein n=2 Tax=Helicob... 44 0.009 UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococ... 44 0.009 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 44 0.009 UniRef50_A8SHQ2 Putative uncharacterized protein n=1 Tax=Faecali... 44 0.011 UniRef50_C3RB76 Putative uncharacterized protein n=5 Tax=Bactero... 44 0.011 UniRef50_Q0F1L2 Putative uncharacterized protein n=4 Tax=Bacteri... 44 0.012 UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=... 43 0.013 UniRef50_Q46GU3 Cyanobacteria-specific protein n=7 Tax=Cyanobact... 43 0.013 UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglob... 43 0.013 UniRef50_A7I2M0 Putative uncharacterized protein n=1 Tax=Campylo... 43 0.013 UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocar... 43 0.013 UniRef50_B0CDG4 Decarboxylase family protein n=16 Tax=Cyanobacte... 43 0.014 UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=U... 43 0.014 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 43 0.016 UniRef50_B6BN03 Lysine decarboxylase family protein n=3 Tax=Camp... 43 0.017 UniRef50_C0QXQ1 Predicted Rossmann fold nucleotide-binding prote... 43 0.017 UniRef50_Q2N8C1 Decarboxylase family protein n=6 Tax=Sphingomona... 43 0.017 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 43 0.017 UniRef50_A2SSU9 Transcriptional regulator, ArsR family n=1 Tax=M... 43 0.017 UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus... 43 0.019 UniRef50_B1AJN2 Putative uncharacterized protein n=14 Tax=Ureapl... 43 0.019 UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organi... 43 0.020 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 43 0.020 UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium s... 43 0.020 UniRef50_B4CX49 Putative uncharacterized protein n=1 Tax=Chthoni... 43 0.021 UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillu... 43 0.021 UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelag... 43 0.023 UniRef50_B0SEG9 Rossmann fold nucleotide-binding protein n=2 Tax... 43 0.023 UniRef50_B5IAE6 ERCC4 domain protein n=2 Tax=Aciduliprofundum bo... 43 0.025 UniRef50_A0B6S9 Transcriptional regulator, ArsR family n=1 Tax=M... 43 0.025 UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga ol... 43 0.025 UniRef50_B3V6E4 ATP-dependent RNA helicase EIF-4A family n=1 Tax... 43 0.026 UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 ... 43 0.026 UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermopr... 43 0.026 UniRef50_UPI0001C4211A Hef nuclease n=1 Tax=Methanobrevibacter r... 43 0.027 UniRef50_D2LHD4 Putative uncharacterized protein n=2 Tax=Bacteri... 42 0.031 UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides... 42 0.032 UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistace... 42 0.032 UniRef50_B9DK81 Lysine decarboxlyase family protein n=57 Tax=Sta... 42 0.032 UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadal... 42 0.033 UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=T... 42 0.033 UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae R... 42 0.036 UniRef50_A8LF72 Rossmann fold nucleotide-binding protein-like pr... 42 0.036 UniRef50_D1PQA8 Putative uncharacterized protein n=1 Tax=Subdoli... 42 0.036 UniRef50_B0KVB7 Putative uncharacterized protein n=1 Tax=uncultu... 42 0.037 UniRef50_Q9YC15 Repair endonuclease XPF n=1 Tax=Aeropyrum pernix... 42 0.038 UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria R... 42 0.039 UniRef50_A6DMD6 Excinuclease ABC subunit C n=1 Tax=Lentisphaera ... 42 0.040 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 42 0.040 UniRef50_O34359 Uncharacterized SPBc2 prophage-derived protein y... 42 0.041 UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales... 42 0.046 UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=... 42 0.047 UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclass... 41 0.050 UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=L... 41 0.052 UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus Rep... 41 0.053 UniRef50_B9KC51 UvrABC system protein C n=1 Tax=Thermotoga neapo... 41 0.056 UniRef50_Q7NCS7 Gll2901 protein n=1 Tax=Gloeobacter violaceus Re... 41 0.061 UniRef50_A8MCE8 Putative uncharacterized protein n=1 Tax=Caldivi... 41 0.061 UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conex... 41 0.064 UniRef50_D1C6N8 RecA-family ATPase-like protein n=1 Tax=Sphaerob... 41 0.064 UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator ... 41 0.065 UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=O... 41 0.070 UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibaci... 41 0.071 UniRef50_B7G6N1 Predicted protein (Fragment) n=3 Tax=Eukaryota R... 41 0.071 UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteria... 41 0.082 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 41 0.087 UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=A... 41 0.092 UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=F... 41 0.097 UniRef50_C4V2J7 Exodeoxyribonuclease V alpha subunit n=1 Tax=Sel... 41 0.098 UniRef50_A8VQ13 Peptidase M20 n=1 Tax=Bacillus selenitireducens ... 41 0.099 UniRef50_UPI0001C41FEF hypothetical protein mru_1379 n=1 Tax=Met... 41 0.100 >UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium thermocellum RepID=A3DCL8_CLOTH Length = 370 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 192/371 (51%), Gaps = 11/371 (2%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS- 54 M + + W+ L SI + ++ ++ + + L + + Sbjct: 1 MESNLKEWVWLSSIPGIGAVKSRKLLEHFGDIHNVWSATAAELAVLPFLNRKDILNLTNV 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ +E L + + + +I + E YP L D P L+++G + LAVVG Sbjct: 61 KFKQDVERHLENIHKNDIKVITLEDELYPAYLKNIYDPPLVLYMKGTI-QEEEKYLAVVG 119 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + LA G+T+ SG+ARG+D AH AL+V G +IAVLG GL+ + Sbjct: 120 SRRATSYGLDMAKKISRELAECGITVVSGMARGVDSFAHMGALEVKGRTIAVLGCGLDIV 179 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +++E GA +SE+ P+ NFP RNRIISG+S GV+V+EA RSGSL Sbjct: 180 YPYENKKLMENIIES-GACLSEYLPGTTPVPGNFPARNRIISGISLGVVVIEAGERSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREVFALPG + + S G + LIK+GA +VT ++ILE L Sbjct: 239 ITANFALEQGREVFALPGNVNSIKSTGTNKLIKEGAKIVTGIDDILEELNIYFIEENTKV 298 Query: 295 ENSFYSPDQ---QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + D+ + + +++ + E +D +A + G + V + L+ LEL G + Sbjct: 299 SFNKNLQDERILRGLDNDEKKVVECLKLESMHIDNIARKTGFGIQLVNSILVMLELKGVV 358 Query: 352 AAVPGGYVRLR 362 +PG +L+ Sbjct: 359 EQLPGKIFKLK 369 >UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SMF_ECOLI Length = 374 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 374/374 (100%), Positives = 374/374 (100%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI Sbjct: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW Sbjct: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA Sbjct: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA Sbjct: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS Sbjct: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR Sbjct: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRACHVRRTNVFV Sbjct: 361 LRRACHVRRTNVFV 374 >UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVQ1_9BACT Length = 367 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 191/365 (52%), Gaps = 7/365 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M + E LRL + + + + + + G+ + A L Sbjct: 1 MTEFEAILRLHMTKGIGARTYQTLVERFGSIAGVFQAVKPELEKLPGIGGKIANAILEES 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ I + E+ N +IP S YP L D P L+V+G L LA+VGS Sbjct: 61 QRVDIHQEIDLAEKNNIKIIPYTSADYPQHLKNLYDPPLVLYVKGNLLETDLIALAIVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++YG F LA +G I SG+ARGID AHK A+ NG +IAVLG GL T++ Sbjct: 121 RRCTYYGLSQAERFARQLAQKGFCIISGMARGIDTAAHKGAISSNGRTIAVLGCGLGTVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L+ +++ Q GAL+SEFP++ PP NFP RNRIISGLS GVLV+E+ L+SGSL+ Sbjct: 181 PKENTVLSENII-QHGALISEFPINTPPDYRNFPPRNRIISGLSLGVLVIESTLKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ ALEQG+EVFALPG + + S+G + LIK+GA L + +I++ L L A E Sbjct: 240 TAQWALEQGKEVFALPGNVDSLYSQGTNKLIKEGAKLTEDITDIIQELGHVADSLCPAGE 299 Query: 296 NSFYSPDQQ-DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ + + + ++ + + +D + + P V + L+ LE+ + + Sbjct: 300 DAALNDPRDLLLNSHEKKIFSLLSSAPIYIDEIIQSTKLPSSIVSSTLMILEIKKLVKQL 359 Query: 355 PGGYV 359 G Sbjct: 360 SGKRF 364 >UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacteriaceae RepID=C6C8N1_DICDC Length = 377 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 216/377 (57%), Positives = 272/377 (72%), Gaps = 3/377 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M DTEIWLR+ SI L +V + + ++ L+ +GL RQ RF++F R+ Sbjct: 1 MTDTEIWLRVASIKGLSAHKVVGLVKRIMRERDSAVDFLRASGLDDRQTARFIAFDRRQS 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + WLE + H + SE YPP L + + P +FV G+ L S Q+AVVGSR +S Sbjct: 61 DDVERWLEDSHCHFVTYGSESYPPLLASISSPPPFIFVRGDDCTLSSAQIAVVGSRDNSN 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA + ITSGLA GIDG+AH+AAL G +IAVLG+GL I+P++HA Sbjct: 121 YGEQWGRFFSRELAANRLIITSGLAVGIDGIAHQAALDAGGKTIAVLGSGLRQIYPKKHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +++E GGA+VSEF L PP+A NFPRRNRIISGL GVLV+EA++RSGSLVTAR A Sbjct: 181 ALADAIVENGGAIVSEFLLKTPPIAANFPRRNRIISGLCLGVLVIEASMRSGSLVTARYA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQ R++FALPGP+GNP +EG HWLI+QGA LVT P+++LE L GL WLPD + Sbjct: 241 LEQNRDIFALPGPVGNPMTEGTHWLIQQGAYLVTHPKDVLEQLHNGLQWLPDISSENDEE 300 Query: 301 ---PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + ++ LPF ++LANVGDEVTPVDVVAERAGQPVPEVV++LL+LELAGWIAAVPGG Sbjct: 301 IICSPEAELELPFADVLANVGDEVTPVDVVAERAGQPVPEVVSKLLDLELAGWIAAVPGG 360 Query: 358 YVRLRRACHVRRTNVFV 374 YVR+RRACHVRRT+V V Sbjct: 361 YVRIRRACHVRRTHVLV 377 >UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Alteromonadales RepID=Q21PU2_SACD2 Length = 399 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 137/375 (36%), Positives = 208/375 (55%), Gaps = 17/375 (4%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----------LTLRQAQRFLS 54 E + + + ++ + L L ++Q+ S Sbjct: 25 EELILFTRLPGVGAATYWQLLDRFPSIHSALQASPEALKPFLSQEALDTLALVRSQKSAS 84 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + ++ + WL++ + L+ D YP L P L+V+G +L+ Q+A+VG Sbjct: 85 MAVQQVQRDMDWLQKNDITLVDTDHTAYPELLREIKRTPPLLYVKGCPASLNFPQVAIVG 144 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G + F LA G TITSGLA GID AH+ A++V G +IAV+G G++++ Sbjct: 145 SRKPTPAGRDTAQAFGSDLAKSGFTITSGLAMGIDAAAHEGAVKVKGRTIAVIGTGIDSV 204 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+R++ LA+ ++ GGA+VSEFPL P NFP+RNRI+SGLS GV+VVEAA++SGSL Sbjct: 205 YPQRNSALASEIIANGGAIVSEFPLGTDPQPQNFPQRNRIVSGLSFGVVVVEAAVKSGSL 264 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---- 290 ++AR AL+Q RE+FA+PG I NP S G H LIK+GA LV ++I++ L L Sbjct: 265 ISARYALQQNRELFAVPGSIHNPLSRGCHALIKEGAKLVETSQDIVDELGGFLSRQRDLL 324 Query: 291 ---PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 ENS D+ ++LA + TP+D +AER +P+ EV++ LL +EL Sbjct: 325 DIYKQPAENSLPKHDELIANDLEDDVLAKLDYSPTPIDALAERTKKPIGEVMSCLLTMEL 384 Query: 348 AGWIAAVPGGYVRLR 362 G +A + GY+RLR Sbjct: 385 KGLVANLGAGYMRLR 399 >UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium RepID=B8I3R0_CLOCE Length = 374 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 195/373 (52%), Gaps = 13/373 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E W+ L S+ L + + I + + GLT + + L+ Sbjct: 1 MREIEYWIWLTSLEGLSSKKALNLLETYRNPEVIYGLSESELQNTRGLTEKNVKELLNSN 60 Query: 57 R-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + S L + N ++ E YP +L D P AL+ G L SF +AVVGS Sbjct: 61 KRERVGSIYQMLVRYNIKMVNIFEENYPQKLKNIYDPPIALYYRGNLD-SDSFSIAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R LA RGVTI SGLARGID +AHK L G +IAVLG+GL+ I+ Sbjct: 120 RRTTGYGANTARKLSYDLAMRGVTIVSGLARGIDSIAHKGCLDAGGKTIAVLGSGLDNIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L +++ GG +SE+P +PPL +NFP RNRIISG+S GV+V+EAA RSGSL+ Sbjct: 180 PPENAGLFKDIIDSGGLALSEYPPGMPPLQHNFPARNRIISGISGGVVVIEAAKRSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------H 288 TA CALEQGREVFA+PG I S G + LIK+GA LV ++LE ++ Sbjct: 240 TAGCALEQGREVFAVPGNIDCAYSMGTNQLIKEGAKLVLNATDVLEEFEYNGIQNFTPVQ 299 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 D + Y + ++ ++L + + +D + ER+ + + L LE+ Sbjct: 300 GDIDEKISKKYLNLFKGLSAGEIKILKVIFNGANNIDEILERSNFSAKDASSILFMLEMK 359 Query: 349 GWIAAVPGGYVRL 361 G I PG + Sbjct: 360 GVIKQNPGKLFEV 372 >UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacteriaceae RepID=B5FJI1_SALDC Length = 374 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 271/374 (72%), Positives = 309/374 (82%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM + LYG+ M+ +A+ + +Q I+ LQ+ GLT RQA+RFL P + Sbjct: 1 MARTEIWLRLMYVGDLYGEAMLNMANSLIRQPQINRTHLQEAGLTARQAERFLQLPAGVL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L WLE P +H + ADSE YPPQL A DYPGA+F++G+ LH+ QLAVVGSR+HSW Sbjct: 61 DETLRWLELPQYHFLCADSEIYPPQLRAIDDYPGAIFIDGDPACLHTCQLAVVGSRSHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRL CE+LA G+TITSGLARGIDGVAH AA+ + G S+AVLGNGL I+PRRHA Sbjct: 121 YGERWGRLLCESLAKSGLTITSGLARGIDGVAHNAAMSMGGKSVAVLGNGLAKIYPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +L+ GGA+VSEFPL PPL +FPRRNRIISGLSKGVLV+EAALRSGSLVTARCA Sbjct: 181 VLAENLIATGGAVVSEFPLSTPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPGPIG+PGSEG HWLIKQGA LVT PE+ILENLQ+GLHWLP ENS YS Sbjct: 241 LEQGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +Q + ALPFPELLANVGDEVTPVDVVAERAGQPVP VV QLLELELAGWIAAVPGGYVR Sbjct: 301 LNQDEAALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRA HVRRTNVFV Sbjct: 361 LRRASHVRRTNVFV 374 >UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJQ0_MOOTA Length = 361 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 124/365 (33%), Positives = 182/365 (49%), Gaps = 9/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + W+ L L ++++ + + GL Sbjct: 1 MEEKPFWVALQQTPGLGARRVLQLVKYFGGARAAWEAPEGELLTLEGLGKGAVSLLNWRR 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + E + L +I + E YPP+L D P L+ G F++A+VG+R Sbjct: 61 QVHPEKIMVSLAAAGIGVITIEEEVYPPELKRIYDPPPVLYWRGSRLPGEGFKIAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + LA GV + SGLARGID AH+ A++ G++ +LG G++ ++P Sbjct: 121 RATAYGLKVAEELAAGLAEAGVGVVSGLARGIDAAAHRGAIKGGGLTWGILGCGVDIVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H L ++E GA++SEFP PP A +FP RNRIISGL+ G +VVEAA RSG+L+T Sbjct: 181 REHRELYRQVMEH-GAIISEFPPGTPPDAGHFPARNRIISGLTAGTVVVEAAARSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFA+PGPI + S+GPH LIKQGA LV+ +ILE + W E Sbjct: 240 ADLALEQNRDVFAVPGPITSRYSQGPHDLIKQGAKLVSGVADILEEYEPRSLWSLPREET 299 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 ++LA + + +DV+ G P E+ T L+ LE+ I +PG Sbjct: 300 RASVTL----NAIEEKVLAVLEATPSHLDVIMAATGLPAGELNTALIMLEMKQLIRRLPG 355 Query: 357 GYVRL 361 G+ Sbjct: 356 GFYVR 360 >UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K219_DESAC Length = 363 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 130/367 (35%), Positives = 190/367 (51%), Gaps = 12/367 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M E WLRL + L ++++ H AV Q + + L P ++ Sbjct: 1 MTPQEIFWLRLHLTAGLGRQRLIQLIHHYGSAEAALAVSPQHWAEHAQVKSKSLGTPPEA 60 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L+Q N L + YP L +D P L++ G+ LA+VGS Sbjct: 61 QDPTFQKAVTRLDQLNVRLTSLWDDDYPQALRHISDPPALLYLRGQWP--EKRTLALVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S G+RW TL+ +TI SGLARGID AH+ AL+ G +IAVLG G++ I+ Sbjct: 119 RRCSPAGQRWTEKLAHTLSQHNLTIVSGLARGIDSAAHRGALKGPGSTIAVLGCGIDLIY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L + E+ G +VSE+P P NFP RNRIISGLS+GV+++EAAL+SGSL+ Sbjct: 179 PKENRHLFEQIGEK-GIIVSEYPPGTAPKPGNFPGRNRIISGLSEGVVIIEAALQSGSLI 237 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+VFA+PGP + G LI GA LV +P++IL++ H + Sbjct: 238 TADFALEQGRDVFAVPGPPYDSQVAGCLKLIHDGATLVCQPQDILDHFGLTEHNIAV--- 294 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 P ++ +L +G +D +A +G EV +L LEL G ++P Sbjct: 295 -EENEPTVPPLSNSQDMVLRKLGKTPRHLDKLATESGLTPMEVSAIVLHLELLGLAQSLP 353 Query: 356 GGYVRLR 362 GG+ Sbjct: 354 GGHYIRA 360 >UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcus RepID=Q2JHL8_SYNJB Length = 385 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 113/367 (30%), Positives = 172/367 (46%), Gaps = 11/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 + WL I + + R+A + G+ AQ +S Sbjct: 25 RERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIVSARP 84 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E L + + YPP L D P L+ GE +A+VG+R Sbjct: 85 GLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTR 144 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 A + YG +W + LA G + SGLA GIDG+AH+A L G ++AV+G G++ ++P Sbjct: 145 APTAYGRQWTQKVSAALAEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYP 204 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L +L Q GA++SE+P PP +FP+RNRII+GL + LV+EA SG+L+T Sbjct: 205 AHHQALYRRILAQ-GAILSEYPPGTPPAKEHFPQRNRIIAGLCRATLVMEAPETSGALIT 263 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A A GREV+ALPG I + G LI+ GA ++ EE+L++L + Sbjct: 264 AHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLKQPS 323 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S D Q L G+ + +D +A+ + + + + LL +EL GW+ +PG Sbjct: 324 STGPSDPQQQLLWQLL-----GEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPG 378 Query: 357 GYVRLRR 363 + R Sbjct: 379 MRYQRAR 385 >UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B8CW40_HALOH Length = 409 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 193/370 (52%), Gaps = 14/370 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + L L I+ L + + ++ S I ++ G+ + A++ + Sbjct: 31 MPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGIN-KLAEKIVKQR 89 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +K +IE+ L L + N + YP +L + P ++ +G+ + +A+VGS Sbjct: 90 KKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGKYD-NNERIIAIVGS 148 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R +LA RG I SG ARGID AHK AL+V G +IAVLG GLN I+ Sbjct: 149 RRATRYGCNIARNLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIY 208 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L L+ G L+SE + PLA NFPRRNRIISGL++GV+VVEA+ RSGSL+ Sbjct: 209 PPENKKL-TGLVTDSGYLLSELTPETGPLASNFPRRNRIISGLAEGVIVVEASNRSGSLI 267 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL----- 290 TA A +QG+ +F++PG I P S+G + LIK+GA ++T +++L L L Sbjct: 268 TANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEKPLIKSYN 327 Query: 291 -PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + S + D ++ ++++ + E ++ + G +V LL LEL G Sbjct: 328 RKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKG 387 Query: 350 WIAAVPGGYV 359 I+ G Sbjct: 388 LISPKQGKKY 397 >UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LER1_SYNFM Length = 386 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 135/363 (37%), Positives = 182/363 (50%), Gaps = 7/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 D WL L + L ++R+ + + ++ GL + Sbjct: 13 DRIAWLALRLVPDLGNRSVLRLINRFGSPRAVLDAEPKELATVEGLRGKAISALQRKEFL 72 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E+ L++ L+ + YP L A D P LFV GEL +AVVGSRA Sbjct: 73 RHPETEWETLQRKGVKLLALNDPEYPSNLSAIPDPPAVLFVRGELQPRDLVAVAVVGSRA 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G + LA GVTI SG A GID AH+ A++ G +IAVLG GL+ +P Sbjct: 133 ASPMGMIFTEKLSGELALNGVTIVSGFAVGIDSAAHRGAIKAGGRTIAVLGCGLDIDYPY 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L + GALV+EFPL PP+A +FP+RNRIISGLS GV+VVEAA RSGSL+TA Sbjct: 193 GQGGLRDEIAAS-GALVTEFPLGTPPVAGHFPQRNRIISGLSLGVVVVEAAHRSGSLITA 251 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-EN 296 R ALEQGREVFA+PG + S GPH L+++GA LV E++LE L+ + P E Sbjct: 252 RLALEQGREVFAVPGMAHHYRSVGPHRLLREGAKLVEGAEDVLEELRPLIRRSAAPPGEP 311 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + L + +D +A PV +V+ L LEL G +PG Sbjct: 312 DERETPVSGLEPDELQALRELDGNPRHIDEIARSTQWPVGKVMAVLSNLELKGVARQLPG 371 Query: 357 GYV 359 Y Sbjct: 372 KYF 374 >UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromonadales RepID=A1ALE0_PELPD Length = 371 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 125/363 (34%), Positives = 179/363 (49%), Gaps = 9/363 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-----TLRQAQRFLSFPR 57 + W+ L S++ + R+ ++ A + + Sbjct: 9 EELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQ 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E LE+ L+ S YP L +D P L+V+G++ H +A+VGSR Sbjct: 69 RQAEEECRRLEKSGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIR-SHEPAIAMVGSRR 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + E LA GV + SG+ARG+D AH+ AL +G +I VLG G++ I+P Sbjct: 128 ATRYGVQATARLAEELARHGVAVISGMARGVDTAAHRGALAGDGRTIGVLGCGIDRIYPP 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + E+ G LVSEFPL PL NFPRRNRIISGL+ GVLVVEAA +SGSL+TA Sbjct: 188 ENRDLFDEMAER-GCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKSGSLITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + ALEQGR+VFA+PG IG G + LIKQGA LV E++LE L + Sbjct: 247 QYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAV--SP 304 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 P + + + +D + + EV + LL LEL G + +PG Sbjct: 305 PPEPRVFALTPREAGVYELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGA 364 Query: 358 YVR 360 + Sbjct: 365 HYA 367 >UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi RepID=A9B0F9_HERA2 Length = 369 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPR 57 M + ++ + + + + + + GL R Q + Sbjct: 1 MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +E+ L + + N ++ +P L P L++ G L + +A+VG+R Sbjct: 61 HLDLEAELRTIAEQNIKVVLQTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG F LA G+T+ SGLA GID +AH+ AL NG ++AVLG+GL I+P Sbjct: 121 NPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTALDNNGRTLAVLGSGLQQIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H +LAA + Q GAL+SE+ PL+ NFP RNR+ISGLS +VVEA RSG+L+T Sbjct: 181 SQHRQLAAD-VSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQGR+VFA+PG I + S+GP+ LI GA + E++LE L + Sbjct: 240 ARFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNL------HQAQA 293 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 LL ++ + T +D + G ++ L +EL G + V G Sbjct: 294 QQTVSTIVPETPAEALLLPHLSGQPTHIDELGRSCGLAAHDLAATLGLMELKGMVRHVGG 353 Query: 357 GYVRLRRAC 365 + L R Sbjct: 354 MHYVLARET 362 >UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacteria RepID=A5EWL6_DICNV Length = 382 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 196/379 (51%), Gaps = 19/379 (5%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQRFL 53 M D E W L + + + A ++ + + Q + Sbjct: 1 MKDDELAAWCALWRAPGVGSKTFHNVLATFGSPTLFFASSDREVQQRFSNIAPEKWQPWH 60 Query: 54 SFPRK-SIESSLCWLEQ-PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 ++ + L W PN H++ + YP L TD P LFV+G++ L + QLA Sbjct: 61 RAQKETDWQQDLTWCAADPNRHILTLEDARYPALLREITDPPPLLFVQGDVDLLSAPQLA 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVGSR + G + + L G+ ITSG+A GIDG AH+AAL V+G ++AV+G GL Sbjct: 121 VVGSRQPTAAGIQNCTQIAQKLVENGLLITSGMALGIDGAAHQAALAVHGKTLAVVGTGL 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + ++P RH LA + GA+VSEFP+ A++FPRRNRIISGLS GVLVVEA+++S Sbjct: 181 DRVYPARHRELAHQIAA-NGAIVSEFPVGTGVRAHHFPRRNRIISGLSLGVLVVEASIQS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW-- 289 GSL+TAR A EQGREVFALPG I NP + G H LI++GA LV E+I+E L Sbjct: 240 GSLITARLAAEQGREVFALPGSIHNPLARGCHQLIREGAKLVESYEDIVEELLPLAKANV 299 Query: 290 -------LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 P+N + + LL +G + VD + E+ E+ L Sbjct: 300 ELQQQFQPHHLPQNEPQTHQEYPANSLENRLLNIMGYDPWRVDDLVEKTHLTAAEISAML 359 Query: 343 LELELAGWIAAVPGGYVRL 361 L LEL G +A++ GG + Sbjct: 360 LMLELDGAVASLSGGRYQR 378 >UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT39_SYNAS Length = 394 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 132/392 (33%), Positives = 189/392 (48%), Gaps = 29/392 (7%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 M + E W+ L S++ + + + Q G+ + A R + Sbjct: 1 MENDELIYWMALRSVNGIGNLGFRSLMDAFKFPHDVFHASYQDLMSVPGIGPKTASRIKA 60 Query: 55 FP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 F + +E L L+Q N H+I YP L DYP L+V+G L +A+V Sbjct: 61 FHEWRRLEYDLKKLQQLNIHVITFHDRHYPSLLKTIYDYPPILYVKGMLKNDDL-NIALV 119 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR S YG LA G+T+ SG+ARGID AH+ AL G +IAVLG GL+ Sbjct: 120 GSRTASTYGVFTTERLARELALNGITVVSGMARGIDSAAHRGALAGRGRTIAVLGCGLDI 179 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P + L + GA++SE L PP A NFP RNRIISGLS GV++VEA RSGS Sbjct: 180 VYPPENKNLYEKIAA-DGAVISELALGTPPNAPNFPLRNRIISGLSLGVVIVEANERSGS 238 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TAR ALEQGREVFA+PG I + GS G H LIK+GA L+ +ILE + + + Sbjct: 239 LITARIALEQGREVFAVPGNIDSHGSRGSHKLIKEGAKLIENVGDILEEIIPQIERRREN 298 Query: 294 PENSFYSPDQ--------------------QDVALPFPELLANVGDEVTPVDVVAERAGQ 333 + + + + + D+ +D++ E++G Sbjct: 299 NLLNEQEKNTETSEKKVSCETRSCSAASIFPSFSENEALIFNLLTDKPVDIDLIIEKSGL 358 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + E + LL LEL I +PG + + Sbjct: 359 NINETLNCLLNLELYEAILQLPGKLYKRKEQS 390 >UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT27_METML Length = 370 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 6/361 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSI 60 + +W+ L SIS + ++ +I A L Q ++ A + + Sbjct: 10 EKSLWVSLGSISGIGPQTFCQLLRAFGSPYNIYAASLSQLKEVVSATIANAISNGANQEP 69 Query: 61 ESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + WL N+HLI YP LL +D P L+ +G L L+ +A+VGSR S Sbjct: 70 AAEFTQWLAGANNHLITLADHEYPRALLEISDPPPYLYAKGNLALLNQPSIAIVGSRNAS 129 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE+ F L G+ I SGLA GIDG AH+ AL+ G +IAV+G GL+ ++P +H Sbjct: 130 VQGEKNAEAFAYDLCQHGLCIVSGLALGIDGAAHRGALKAGGATIAVVGTGLDIVYPAKH 189 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + E G L+SEF L P NFP+RNRIISGLS G LVVEA ++SGS +TAR Sbjct: 190 RELAHQIAEH-GLLLSEFALGTPSKPQNFPKRNRIISGLSLGCLVVEANIQSGSQITARM 248 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A EQGRE+FA+PG I +P S+G H LIKQGA LV ++I E L+ L + + Sbjct: 249 AAEQGREIFAIPGSIHSPMSKGCHQLIKQGAKLVDCIQDITEELK--LQPRSNTLISKAS 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + +++A LL +G + P++ + G V EV + L+ LEL G +A++ GG Sbjct: 307 ASQDREIASSEQLLLDTMGFDPAPLERLVTLTGLTVAEVSSMLMLLELDGKVASLTGGQY 366 Query: 360 R 360 + Sbjct: 367 Q 367 >UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaerobacterales RepID=B0K1T9_THEPX Length = 362 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 11/356 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRKSIESS 63 + L ++ + V++ + + + + G + Q + + + Sbjct: 9 IWLSTVKGIGYKSFVQLMEFFKTAEEVYKAKEIDIFKAIG-NRKLVQNIIEAQKLNPFDY 67 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + L+ + D E YP +L D P L+++G ++ + +A+VGSR ++YG+ Sbjct: 68 IERLQNLKISVYTLDEEEYPKELKNIYDPPPVLYLKGNINLKDNLCIAMVGSRNATFYGK 127 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + L+ RG+T+ SG+ARGID +H AL+ G +IAVLGNG+N ++PR + +L Sbjct: 128 QVAQKLAYELSERGITVVSGMARGIDSFSHIGALKERGKTIAVLGNGINIVYPRENKKLM 187 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + E+ G LVSEFPLD PPL NFP RNRIISGLS GV+VVEA ++SGSL+TA+ ALEQ Sbjct: 188 EQISEK-GLLVSEFPLDAPPLPQNFPLRNRIISGLSLGVVVVEAGIKSGSLLTAQFALEQ 246 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I + S G + LIKQGA +V E+ILE EN + Sbjct: 247 GREVFAVPGNITSAYSRGTNELIKQGAKIVIGVEDILEEFNLREDVQQKIEENLIF---- 302 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + E+ + + ++ +A + +V L L L G I +PG Sbjct: 303 -PLTEEEKEVYDFICEAPRDIEEIAGYVKIKISKVNAILSSLMLKGMIEKLPGNKY 357 >UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7Y6_TOLAT Length = 374 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 148/363 (40%), Positives = 206/363 (56%), Gaps = 1/363 (0%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WL L +I + ++ + + L G +Q +R+ F ++ + Sbjct: 13 NELALWLHLTNIPGIGPVKGAKLLQQF-PITALSQSQLSDCGWNQQQIERWFDFSPETYK 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + W ++ + +++ D YP L P LFV G+L L+ QLAVVGSR + Sbjct: 72 PIIDWADETSRYILHFDHPSYPALLRNVVGAPLVLFVAGDLAVLNQQQLAVVGSRRPTQD 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + F L +G ITSGLA GID V+H+ ALQ G +IAV G GL ++P +H R Sbjct: 132 GRDAAQSFTSELVRQGFAITSGLASGIDAVSHQTALQQGGRTIAVQGCGLRHVYPAKHKR 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA+ +LEQGGAL+SEF + P A FPRRNRIISGL+ G LV+EAA +SGSL+TARCAL Sbjct: 192 LASQILEQGGALISEFFPETLPRAEYFPRRNRIISGLTVGTLVIEAAEKSGSLITARCAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQ REVFA+PG N + G H LI+QGA LV + +I+E + + E + Sbjct: 252 EQNREVFAVPGRSNNLNARGCHRLIQQGAKLVCDVADIIEEIGIFPRMVEHYGETGPIAE 311 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + L DEVT +DV+A + PV EV+T+L+ LEL G I +VPGGYVR Sbjct: 312 EPLSDLPFYRLLDNVRSDEVTSIDVIAATSRLPVQEVMTELITLELEGLILSVPGGYVRT 371 Query: 362 RRA 364 R A Sbjct: 372 RSA 374 >UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria RepID=B5YKX6_THEYD Length = 368 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 133/365 (36%), Positives = 194/365 (53%), Gaps = 6/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 + L L I + + R+ I + + G+ + +A+R +F + Sbjct: 4 EEIRYCLALNEIKDIGPVLLKRLFSRFGLAKQIFNATIDELAYVEGIGIEKAKRIKNFDK 63 Query: 58 KS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + IE + E + + E YP L D P LF GEL + + L++VGSR Sbjct: 64 WNVIEKLIKLCENRDIAIYSFSDEKYPKLLREIYDPPVVLFCRGELISENDAALSIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R LA G+TI SGLARGID VAH + L G +IA+LG+G++ I+P Sbjct: 124 RLSEYGRRITERLAYDLACLGITIVSGLARGIDSVAHNSTLSAGGRTIAILGSGVSCIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + LA ++ + GA++SEF D P NFPRRNRIISGLS G LV EA + SG+L+T Sbjct: 184 PENKMLAEKII-KNGAIISEFYPDEGPRKENFPRRNRIISGLSFGTLVTEATINSGALIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGREVFA+PG I + SEG ++LI++GA LVT+ E+ILE ++ + L Sbjct: 243 ASFALEQGREVFAVPGNITSKNSEGTNYLIQKGAKLVTKVEDILEEIEQFIPLLKKITTE 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + D +++ N+ +E +D + + G +V+ LL LE+ G I + G Sbjct: 303 LSNETTKTDRLDNDEKIVFNILNEPLYLDEIILKTGMNTAKVLEILLSLEIDGLINKIEG 362 Query: 357 GYVRL 361 YVR Sbjct: 363 KYVRR 367 >UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y1Y8_CROTZ Length = 381 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 240/374 (64%), Positives = 281/374 (75%), Gaps = 4/374 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM++ SL G+ MVR + A L+ GL ++Q F +P+ + Sbjct: 12 MSPTEIWLRLMAVYSLSGEIMVRAFQRLQNMPGDPAEALRLAGLNIKQRALFFGYPQAKL 71 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E++L WLE P HHL+ A S YP L A +PGAL V G+ AL QLAVVGSR HSW Sbjct: 72 EAALRWLEMPGHHLLTARSAHYPVSLRAIEWFPGALLVAGDPRALTRPQLAVVGSRHHSW 131 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WG FC LA G+T+TSGLA GID +AH++AL+ G +IAVLGNGL ++P RH Sbjct: 132 YGEQWGSKFCYALAESGLTLTSGLALGIDAIAHRSALKAQGKTIAVLGNGLAQVYPARHR 191 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +LA ++EQGGA+VSEFP + P +FPRRNRIISGLS GVLVVEAALRSGSLVTARCA Sbjct: 192 KLAEEIIEQGGAVVSEFPFEAQPRPAHFPRRNRIISGLSVGVLVVEAALRSGSLVTARCA 251 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQGREVFALPGP+GNPG EGPHWLI+QGAI VT P++I++ LQ L WL YS Sbjct: 252 VEQGREVFALPGPVGNPGCEGPHWLIQQGAIAVTHPQDIIDYLQNELPWLKTVN----YS 307 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQ++ ALPFPELLANVGDEVTPVDVVAERAGQPVP V QLLELELAGWIAAVPGGYVR Sbjct: 308 PDQEEGALPFPELLANVGDEVTPVDVVAERAGQPVPLTVAQLLELELAGWIAAVPGGYVR 367 Query: 361 LRRACHVRRTNVFV 374 +RRA HVRRTNVFV Sbjct: 368 VRRAGHVRRTNVFV 381 >UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7H6_PELCD Length = 366 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 184/371 (49%), Gaps = 11/371 (2%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSF 55 M E WLRL L ++R+ ++ + A+ + Sbjct: 1 MTPKEQAWLRLHLTPGLGRAGIIRLMEAFGSPEAALIASPREWQKRARIRAAVAEALPAE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSE-FYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +L L Q ++ E YP L D P L++ G L LAVVG Sbjct: 61 NSPLYLQTLEELTQLEVGILSLWDEKRYPALLRTIYDPPALLYIRGTL--TEQPGLAVVG 118 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + + C LA +G+ I SGLARGID AH+ AL G ++AVLG G++ I Sbjct: 119 ARKATVAARQNTHHLCRQLAAQGIAIVSGLARGIDRSAHEGALAAGGHTVAVLGCGIDRI 178 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +L+QGGA++SE+P PPLA +FP RNRIISG+ + VLVVEAA RSGSL Sbjct: 179 YPAENKQLFNDILDQGGAILSEYPPGAPPLARHFPGRNRIISGICRAVLVVEAAQRSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREVFALPGPI NP S G + L+K GA LVTE +IL+ G P Sbjct: 239 ITAEFALEQGREVFALPGPICNPASHGTNQLLKDGAHLVTEAADILQIFMPGRSAPECVP 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + AL ++ + D VD +A + G EV LL LEL + Sbjct: 299 ADDGMVKKLSGTAL---KVYQALQDTPLHVDELARKCGLTPMEVSAILLHLELEDGAIQL 355 Query: 355 PGGYVRLRRAC 365 PG +R+ Sbjct: 356 PGMRFVRKRST 366 >UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=15 Tax=Vibrionaceae RepID=A7K4Z8_VIBSE Length = 369 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 172/366 (46%), Positives = 218/366 (59%), Gaps = 8/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRK 58 D WL+L + + G M ++ +I LQQ GLT +Q Q + S ++ Sbjct: 7 DDLAAWLKLSCLPGIGGVKMNKLLAR-DTPRNIVNFSPEQLQQLGLTTKQIQAWASTDKE 65 Query: 59 SIESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +++ L WLE NHH++ YPPQL P LFV+G L Q+A+VGSR Sbjct: 66 -VDACLSWLEASTNHHILTLTDPLYPPQLKQIVAPPPLLFVQGNSTCLSQPQIAMVGSRN 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G + R F +TSGLA GIDG AH ALQ G +IAVLG+GL I+P Sbjct: 125 ASIDGLQHARHFAAEFVQHDFIVTSGLALGIDGHAHDGALQAKGKTIAVLGSGLENIYPA 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA ++E GALVSEF + P NFPRRNRIISGLS GVLVVEAA RSGSL+TA Sbjct: 185 RHRGLAQRVIEH-GALVSEFRPNAKPRPENFPRRNRIISGLSLGVLVVEAAERSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R ALEQGREVFALP I P + G + LI+ GA LV + +++L+ +Q L W + Sbjct: 244 RYALEQGREVFALPASINAPNASGGNQLIRHGACLVEKTKDVLDEIQSLLDWSINQST-D 302 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +S + LPFP+LLANVG E TPVD++A R PV EV+ QLLELEL+G + AV GG Sbjct: 303 LFSTLNDEEELPFPQLLANVGSEATPVDILANRTNIPVQEVMMQLLELELSGHVVAVSGG 362 Query: 358 YVRLRR 363 Y+R R Sbjct: 363 YIRKGR 368 >UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH91_HELMI Length = 378 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 190/371 (51%), Gaps = 13/371 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 + + W+ L ++ + + + ++ GL+ + +R L R+ Sbjct: 9 ERDSWIALSALPGIGPRRFYALLGHFGTARNAWLAADERWDGVAGLSRQGWERTLQARRR 68 Query: 59 --SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L L Q + + E YP L + D P L+V G+L A A+VG+R Sbjct: 69 ADRVTVLLRRLTQGDIAAVLLIDEQYPALLRSIPDPPPVLYVRGKLTAEDESAFAIVGTR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + LA G T+ SG+ARGIDG+AH++AL+ G +IAVL G++ I+P Sbjct: 129 KPSAYGVKACAAIARDLAQHGRTVVSGMARGIDGIAHQSALEAGGRTIAVLAGGVDVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +LA+ ++EQ GALVSE+P P FP RNRIISGLS GV+VVEA +SG+L+T Sbjct: 189 PEHGKLASRIVEQ-GALVSEYPPGKRPEPGTFPVRNRIISGLSNGVIVVEAGEKSGALIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-----FGLHWLP 291 A ALEQGR+VFA+PGPI P S G + LI+QGA LV E+IL+ +Q Sbjct: 248 ADQALEQGRDVFAVPGPITLPQSIGTNRLIQQGAKLVITVEDILDEVQRQLTLPLSAPAH 307 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + E + D + +L + E D +A R G EV L LEL G + Sbjct: 308 SSDEQLSENRLSSDQSEAERRILEILDWEPRSADELAARLGLSGSEVAAALTLLELKGRV 367 Query: 352 A-AVPGGYVRL 361 GG+V + Sbjct: 368 QMERGGGFVAV 378 >UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILA8_ACIBL Length = 385 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 135/369 (36%), Positives = 183/369 (49%), Gaps = 14/369 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LSFPRKSIES 62 WL L L R+ I L + GL AQ L + E Sbjct: 15 WLALSLTPQLGPTRGRRLVEHFGDVERIFRASLTELEASGLPAASAQSIALGKSYELAED 74 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + Q ++ YPP+L+ D P AL V G++ L +AVVG+R + YG Sbjct: 75 EMVKTAQAGAKIVAIGDPEYPPRLMEIYDPPLALRVRGDVSILSKPGMAVVGTRHPTPYG 134 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 LA RGV I SGLARG+D AH+ + G ++AV G G++ I+PR + +L Sbjct: 135 LGMAERLSCDLAARGVIILSGLARGVDTAAHRGTINARGKTVAVFGTGVDEIYPRANKKL 194 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A ++E GGAL+SEFP P NFP RNRIISGLS GVLV+EA SG+ +TARCALE Sbjct: 195 AEQIVEFGGALISEFPTGTFPAPQNFPIRNRIISGLSVGVLVIEAGEYSGTRITARCALE 254 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------HWLPDAPE 295 Q REVFA+PG + N S GP+ LIKQGA LV E++ E L + L Sbjct: 255 QCREVFAVPGNVTNKLSWGPNTLIKQGAKLVATWEDVWEELGSDIRLQIPPPEALATETP 314 Query: 296 NSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAG--QPVPEVVTQLLELELAGWIA 352 + DQ ++ ++ A + DE +D + E+ E+ + L ELE+A I Sbjct: 315 QAASLFDQHEMPAQERKVYALLRADESMHIDELIEKLDGRLSSAEIFSALFELEMASKIR 374 Query: 353 AVPGGYVRL 361 +PG Y Sbjct: 375 QMPGKYYVR 383 >UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDL9_THET1 Length = 365 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 179/364 (49%), Gaps = 12/364 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK- 58 D W+ I S+ + ++ L+ + + L + Sbjct: 9 DLPYWIAFSRIPSIGPARIRKLLAHFGGLQRAWEANALELKAAEMDDKSIGIILKARKSI 68 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + L LE DS YP L + P ++V+G++ +AVVG+R Sbjct: 69 NPHLELEKLESRGIKPYAYDSPGYPRLLSYVPNPPVVIYVQGDIVQEDECSVAVVGTRKA 128 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG L GVT+ SGLARGID AH+AAL+ G +IAVLG+GL+ ++P Sbjct: 129 TAYGREVVSRIVTGLVMNGVTVVSGLARGIDSYAHRAALEAGGRTIAVLGSGLDQVYPWE 188 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +LA ++ + GALVSE+PL P A NFP RNRII+GLS V+V+EA ++SG+L++A Sbjct: 189 NKKLADDIV-RSGALVSEYPLGTRPEARNFPPRNRIITGLSLAVVVIEADMKSGALISAG 247 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A +QGREV A+PG I +P S G ++LI+QGA LV+ E+ILE L L Sbjct: 248 FAAQQGREVMAVPGSILSPTSAGTNYLIQQGAKLVSRVEDILEELDIDRVSL------ES 301 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 S LL +G E +D +A + P+ V L +E+ G + G + Sbjct: 302 NSRSIVTDDPTEQALLDVLGTEPKHIDDIAFESNMPIAVVSATLTMMEIKGIV-RSNGMF 360 Query: 359 VRLR 362 L Sbjct: 361 YSLA 364 >UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Rickettsiella grylli RepID=A8PP37_9COXI Length = 384 Score = 373 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 141/378 (37%), Positives = 195/378 (51%), Gaps = 19/378 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRK 58 + WL L +I + + I + L Q G+ A + + Sbjct: 6 DEIGYWLALYTIPQCGIHTALLLLKKFKTPKEILSASYDELIQAGIRPTLASHLKNPDWE 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 +E L WLEQP + + + YP L D P LF++GE+ L LA+VG+R+ Sbjct: 66 RVELGLHWLEQPQNSIFHWGHDAYPSLLNEIADPPLILFMKGEVSILQRQMLAIVGARSP 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + G L +G I SGLA+GIDG AH+ AL +IAVLG+G+ I+P Sbjct: 126 TPTGREIAYQLANELTEQGFVIISGLAKGIDGAAHQGALFDKAATIAVLGSGIECIYPSC 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++E+GG L+SEF + P A FPRRNRIISGLS GV+VVEA+LRSGSL+TAR Sbjct: 186 HRALANEIVEKGGLLISEFFPNTSPKANYFPRRNRIISGLSLGVIVVEASLRSGSLITAR 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG------------ 286 AL QGREVFA+PG I + S+G H L+K GA LV E+I+++L F Sbjct: 246 YALNQGREVFAIPGSIRSLLSQGCHALLKDGATLVENCEDIIQSLSFLPQCVLSSDKDNV 305 Query: 287 ----LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 H + + + +L+ +G E T +D V R P+ V+ +L Sbjct: 306 GVKGGHNKIPRSPLTPQKNQRSSLDSQDKKLVECLGFETTSIDSVLARTKLPITTVLDRL 365 Query: 343 LELELAGWIAAVPGGYVR 360 L+L G+I VPGGYVR Sbjct: 366 SILQLQGYIDKVPGGYVR 383 >UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=Dehalococcoides RepID=Q3Z8J0_DEHE1 Length = 406 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 126/374 (33%), Positives = 187/374 (50%), Gaps = 14/374 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LS 54 M + + + I+ + + + + + GL A+ S Sbjct: 34 MQNQDCKYAIGFSYINGVGRVRLNLLESYFGNLESAWHAGKEALVSAGLDNSLAENIVAS 93 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 P+ + +L L++ + + YP +L DYP +FV+G+L L +VG Sbjct: 94 RPKIDLPKTLETLKRHDIQVFTHTDSDYPARLKQIHDYPPLIFVKGQLLGNDELCLGIVG 153 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG+ E+LA G+TI SGLARGID VAH AAL+ G SIAV G GL+ I Sbjct: 154 TRQPTVYGKLTTEELAESLARSGLTIVSGLARGIDTVAHTAALKAGGRSIAVFGCGLDII 213 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P ++ LA + E GALVSE P + P FPRRNRI+SGL +G+LV EA SG++ Sbjct: 214 YPSENSCLARQIAE-NGALVSEHPPGIRPRPEFFPRRNRILSGLCRGILVTEAGENSGAV 272 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQ RE+FA+PG I + S G + LI++GA LV +++LE L GL +PD Sbjct: 273 ITANFALEQNREIFAVPGSILSAASVGTNRLIQEGAKLVCSAKDVLEELNIGLLSVPDNT 332 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + +L +G E +D + G + V + L +EL G + + Sbjct: 333 TKAV------PENQTESLILDKLGYEPIHIDQLCRECGLGIALVSSTLAIMELRGQVRSA 386 Query: 355 PG-GYVRLRRACHV 367 G YVR R + Sbjct: 387 GGMNYVRTREKKEI 400 >UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3Y5_9PLAN Length = 376 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 185/364 (50%), Gaps = 6/364 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRK 58 ++L I + + + I Q+ G+ + A + + Sbjct: 12 LLELIQLNLIRGVGPRIRRTLLDQFGSPAQILNAPRQELLNVQGIGTKLADAIIYREAKS 71 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E L + ++ +S YP L D P L+ +G L +A+VGSR Sbjct: 72 TAEDELRRCRASGYQILFEESAEYPSLLREMPDPPSLLYCKGSLLPQDELAVAIVGSRKC 131 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + LA G+T+ SGLARGID AH AL+ G +IAV+ GL I+P Sbjct: 132 THYGLQQAEKIAAALARAGITVVSGLARGIDQAAHTGALKAGGRTIAVMATGLAHIYPPE 191 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L+ ++ Q GA+V+EFPLD P+A FP+RNRIISG S GV+++EA +SG+L TAR Sbjct: 192 HRELSEAVALQ-GAIVTEFPLDQAPVAGLFPQRNRIISGFSMGVVLIEAGRKSGALHTAR 250 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A EQGREVFA+PG I +P S G H LI+ GA+LV + E+ILE L + A Sbjct: 251 HAYEQGREVFAVPGRIDHPASAGCHDLIRDGAMLVRDVEDILEGLGPAKTPVMTAKNREV 310 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ++P + ++ ++L V E ++ + + + +++ L LE+ + +PGGY Sbjct: 311 HTPRELSLSEFERDILNLVTLEPQHLNEIVQSSNLDSSRILSTLTILEMRKVVKRLPGGY 370 Query: 359 VRLR 362 + Sbjct: 371 LVRA 374 >UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobacterium hafniense RepID=B8FRH4_DESHD Length = 389 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 124/375 (33%), Positives = 188/375 (50%), Gaps = 12/375 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF--PRKS 59 + + + +I + + + + Q+ ++ + Sbjct: 16 EEKLMRAMIHTIRGVGNSRLRHLIARYGSAVNALQPSKGSQHSPEEHWQQLIAQKCQEIN 75 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 L L+ LI + E YP L D P L+ +G L LA+VG+R + Sbjct: 76 PGEVLEALQSQGIKLIIPEEEGYPDLLRQLPDAPPLLYYKGALPVRQE-CLAIVGARKAT 134 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + +A +G+ + SGLARGID AH+ AL G++ AV+G GLN ++P + Sbjct: 135 PYGRAAAEALAKDIAGQGIVVVSGLARGIDAAAHRGALAGKGITWAVMGCGLNHMYPPEN 194 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +LA +L +GGAL SEFP +PP FP RNR+ISG+S+GV+VVEAAL+SG+L+T Sbjct: 195 QKLAEEILAKGGALWSEFPPGMPPEPQFFPARNRLISGMSRGVVVVEAALKSGALITVDF 254 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI---------LENLQFGLHWL 290 ALEQGREVFA+PGPI + S+GPH LI+QGA LV E+I +++L Sbjct: 255 ALEQGREVFAVPGPIFSQMSKGPHHLIRQGAKLVESFEDIWVEIPAFAGVDHLSPPSPDR 314 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 S ++ ++ ++L + D T +D + + P ++ LLEL+LAG Sbjct: 315 GTESVESGKQEGKRGISSEQQQILNQLSDVPTHIDQITMNSEVPPEQIPLALLELQLAGR 374 Query: 351 IAAVPGGYVRLRRAC 365 I +PG L C Sbjct: 375 IEQLPGQLYVLAYKC 389 >UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermaceae RepID=Q2S3B9_SALRD Length = 388 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 120/370 (32%), Positives = 179/370 (48%), Gaps = 12/370 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 D + L +S + + + + I G+ + A+ L+F + Sbjct: 19 DQRALIGLSLVSGVGPQRLRALLAAFETPTAIFRASRSTLTQVDGVGDQTAEAILTFDDR 78 Query: 59 SI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + L+ +P +L D P L++ G L + VVG+R Sbjct: 79 AAVRREMERADDLGASLVSPWDARFPDRLREIYDPPAFLWMRGTLPEDARPMVTVVGTRR 138 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F LA RG T+ SGLA GID AHK AL G ++AVLG+G+ I+P+ Sbjct: 139 CTDYGRTQAHHFGAELARRGFTVVSGLAYGIDAAAHKGALDAGGRTVAVLGSGVGHIYPK 198 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + E GA++SE+ LD P A +FP RNRI+SGL+ G LVVE+ G+L+TA Sbjct: 199 KHTALAERIAEH-GAVLSEYGLDAEPDAPHFPERNRILSGLALGTLVVESYAEGGALITA 257 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPEN 296 R ALEQ REVFA+PG I S G + LI+ G A LV E +++LE L + PD + Sbjct: 258 RLALEQNREVFAVPGAITKDSSRGTNRLIQNGHAKLVMEVDDLLEELPAVVVDDPDTVDA 317 Query: 297 SFYS-----PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S ++++ L + + +D + E G E + LLELE GW+ Sbjct: 318 ETVSSGAGRDPTEELSGEAERLYDALSETPVHIDALCEETGLSPSEALPTLLELEFQGWV 377 Query: 352 AAVPGGYVRL 361 + G R Sbjct: 378 RQLAGKQFRR 387 >UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUF8_METI4 Length = 380 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 115/370 (31%), Positives = 188/370 (50%), Gaps = 11/370 (2%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLS 54 M ++LRL+ +S+ +++ + ++ + + GL + ++ Sbjct: 10 MDVSKIRLYLRLLQAASIGSKTALKMIKALGNIENVFQSSPRNISERCGLPTKMIEKIFK 69 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 K I+ + + ++ + EFYPP L P LF++G++ +A+V Sbjct: 70 PEEKTWIDQQINLCLKQQIDIVCYEEEFYPPLLREIDSPPLLLFIKGKIPKHWQNAIALV 129 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + R +A G + SG A GID AH AL NG + AVLG+G++ Sbjct: 130 GTRNPTPYGIQTARKLAYQIAYAGFPVISGFALGIDTQAHLGALAANGTTWAVLGSGIDH 189 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P ++ L+ + Q G L+SEFP+ P + FP RNRIISGLS GV++VEAA SG+ Sbjct: 190 CYPAQNYELSERISAQ-GLLISEFPMGTAPTRFTFPLRNRIISGLSVGVVIVEAAQGSGA 248 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ ALEQGR VFA+PG I NP S GP+ LIKQGA LV + ++ILE + + + Sbjct: 249 LLTAQLALEQGRLVFAVPGRIDNPCSFGPNQLIKQGAKLVDQLQDILEEIHYLHPKVKVD 308 Query: 294 PENSFYSPDQQ---DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + +++ + + D+ +D +AE+ V + L+ LE+ Sbjct: 309 SKKMNRKDQTPIAIELSKDERLVYEALNDQEMSLDELAEKTDLAVSVLCPLLIRLEMKKI 368 Query: 351 IAAVPGGYVR 360 + +PG Sbjct: 369 VQQLPGNRYA 378 >UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteobacteria RepID=A8ZW14_DESOH Length = 389 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 183/376 (48%), Gaps = 15/376 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-F 55 M + W L S+ + R+ + + G++ A + Sbjct: 1 MENLTPWFTLKSVPGVGNLLFKRLIDRFGSPEKVLSAARSDLLGVQGISDTLASAIRAHK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +IE L + ++P YP L D P L+V G+L + +++VGS Sbjct: 61 TPDNIEKVLETCARKAISIVPLTDPGYPALLREIHDPPPYLYVWGKL-VPDAGCISIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G+ + SG+ARGID AH AL NG++ AVLG+GL I+ Sbjct: 120 RSPTRYGLSMATQLSGELAAMGLCVASGMARGIDTAAHTGALDNNGLTYAVLGSGLCRIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + GA++SEFPL P A++FP RNR+ISGLS G +VVEAA RSGSL+ Sbjct: 180 PPENMELARRI-AGQGAVISEFPLFAEPDAHHFPLRNRLISGLSLGTIVVEAAARSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP---- 291 TAR A+EQGREVFA+PG I + S G H L+KQGAILV + +++ + L P Sbjct: 239 TARLAMEQGREVFAVPGSITSFKSTGAHGLLKQGAILVEKASDVIAEISPRLAAGPATAP 298 Query: 292 ----DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 A EN + +L + +D +A++A + LL+LEL Sbjct: 299 AASDRADENKHAGKPTPGLDTDEVRVLQTLEPYPVHIDEIAQKAAMAPGKTAGILLQLEL 358 Query: 348 AGWIAAVPGGYVRLRR 363 G++ PG + Sbjct: 359 KGFVTQEPGKRFLINP 374 >UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcaceae RepID=B1I254_DESAP Length = 394 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 118/366 (32%), Positives = 173/366 (47%), Gaps = 9/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 + WL + G ++ + V + GL A LS + Sbjct: 25 EERAYWLAWVVAWPAGGRRLLNLLEAVGSARQAWEAEKSELAASGLDSSLADELLSRRSR 84 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 + + Q +I YP L D P LF G S +A+VGSR Sbjct: 85 VDPAAEQERVRQAGIRVITWVDADYPESLRHIYDPPAVLFGLGAFSFQESGPAVAIVGSR 144 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L + G+ + SG+ARGID AH+ AL+ ++AVLG+GL+ ++P Sbjct: 145 RATPYGKATAGRLAAALGSCGLVVVSGMARGIDTAAHRGALESGAPTVAVLGSGLDVVYP 204 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R +A L + GG +++EFPL P A++FP RNRIISGL +GV+VVEA RSG+L+T Sbjct: 205 RENAGLMEKIAASGGLVLTEFPLGSKPEAWHFPVRNRIISGLCRGVVVVEAGERSGALIT 264 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+V A+PG + NP S GP+ LIKQGA LV + +++LE L + Sbjct: 265 AELALEQGRDVMAVPGNVNNPFSRGPNRLIKQGARLVEDAKDVLEELGLTALFPETESGE 324 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + +L + + + G P+ L LE+ G++ PG Sbjct: 325 AEAVAQLSGE---EKRVLEILQGQSLSDQALIRLTGLAAPQTAAVLAYLEIKGFVRRAPG 381 Query: 357 G-YVRL 361 G Y L Sbjct: 382 GLYYSL 387 >UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus RepID=A8MHD0_ALKOO Length = 365 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 101/367 (27%), Positives = 187/367 (50%), Gaps = 10/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRF-LSFP 56 + I + L I + D+ ++ + + ++ G ++ + Sbjct: 4 KERNILIWLSHIEGISNKDIEKLIKYFNTLDELWTADVRHIKNALGNRGIIIEKIIKNRN 63 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R+ +++ + E YP +L D P ++++G L+ +A+VG+R Sbjct: 64 REFFSKVFKNIDKYVIECLTIYDENYPEKLRNIYDPPYVIYMKGNKEYLNIPLIAIVGAR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ F + LA G+ SGLA GID +HK AL G ++ VLG GL+ +P Sbjct: 124 KCTAYGKWAAYQFSKELAQWGIGTISGLALGIDTNSHKGALDGTGNTVGVLGCGLDQCYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + RL ++++E G ++SE+PL +PPL ++FP RNRIIS LS GV+V+EA+ +SG+L+T Sbjct: 184 ASNERLMSTMIE-NGCVLSEYPLGMPPLKHHFPARNRIISALSDGVIVIEASEKSGALIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AL+QG++++ALPG I + S+G + LI+ GA ++ + E+++E+L++ E Sbjct: 243 VEYALDQGKDIYALPGNINSLQSKGTNRLIRDGAKILLDIEDVIESLKYRYSISKKQIEK 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S Q++++ + + +D++ E+ L LE+ G+I + G Sbjct: 303 ST----QEELSPLEKRVYEIIRRNPIHIDLLYNETRLHPWELNPILTILEIKGYIIQISG 358 Query: 357 GYVRLRR 363 + + Sbjct: 359 KTFTVPK 365 >UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas RepID=A0KEX2_AERHH Length = 371 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 162/368 (44%), Positives = 217/368 (58%), Gaps = 8/368 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVA----KQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 +WL L +++ + R+ D L+ GL Q Q+ + +P+ Sbjct: 8 LALWLTLDAVTGIGPVTAARLLAHFGGDIVTLFDTDDGALRALGLQSVQVQQ-MRWPQPV 66 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +E +L W +P +HL+ D YP L P L+ G L AL QLA+VG+R + Sbjct: 67 VEQALSWAAEPGNHLLCPDDPAYPALLKEIPAAPLLLYCRGNLAALSVPQLAMVGTRHPT 126 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G+ C L G+ ITSGLA GIDGV H+ AL G ++AVLG+GL+ ++P+RH Sbjct: 127 YAGKDNAARLCSELVACGLAITSGLALGIDGVCHQQALAAGGTTLAVLGSGLDCLYPKRH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA +L +GG L+SE D PLA +FPRRNRIISGLS G LVVEAA +SGSL+TAR Sbjct: 187 QGLAMEILVRGGLLISELAPDKGPLAEHFPRRNRIISGLSLGTLVVEAAEQSGSLITARY 246 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREVFA+PG N + G + LI+QGA LV +I+E L + L + S + Sbjct: 247 ALEQGREVFAVPGAPQNVQALGCNKLIQQGAKLVLSAADIVEELPGFVGLLQQVADLSEH 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 S + + LP+ +LL NV E T VD VAER+ PV V+ +L+ELELAG + AV GGYV Sbjct: 307 SNNSE---LPYADLLDNVDYETTSVDTVAERSQLPVEVVLGRLVELELAGAVMAVAGGYV 363 Query: 360 RLRRACHV 367 R RRA HV Sbjct: 364 RARRANHV 371 >UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9A2_9GAMM Length = 368 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 137/367 (37%), Positives = 192/367 (52%), Gaps = 8/367 (2%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLS- 54 M D E WL L I L + R+ + I + L + + Sbjct: 1 MKDDETRAWLALSRIPHLPRRVLHRLILATSSAEEIFQLSAFELTAAKVGAEAQKMLREG 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + +E ++ + L+P S YP L D P L++ G+L L LA+VG Sbjct: 61 VDLRQVEQDFKTVQLQHIKLLPVSSTLYPALLKEINDPPPLLYIRGDLSVLDLPSLAMVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G F LA G +I SG+A G+D H+ AL G ++AVLG G++ + Sbjct: 121 SRRSSQAGGANAFRFARELAGAGFSIVSGMALGVDTQCHRGALAAGGSTVAVLGTGIDIV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PRR+ L S++ Q GA++SEFP+ P FPRRNRIISG+S GVLVVEAAL+SGSL Sbjct: 181 YPRRNKELFESIVCQ-GAVISEFPMGTDPHPARFPRRNRIISGMSLGVLVVEAALQSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDA 293 +TARCA+EQGREVFA+PG I N GS+G H LIKQGA LV +++E L + P Sbjct: 240 ITARCAMEQGREVFAIPGSIHNSGSKGCHQLIKQGAKLVESVSDVMEELKGWCADAPPVL 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E + +D+ LL +G + +D + +R P+ ++V + LEL G + Sbjct: 300 EEKGAQNKVSKDLHERERLLLDIIGYDPVSIDSLQQRTDWPMHDLVALVTALELRGLLDC 359 Query: 354 VPGGYVR 360 V G Y R Sbjct: 360 VAGSYQR 366 >UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J600_DESRM Length = 364 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 185/364 (50%), Gaps = 10/364 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + W+ + G + I H + ++ A++ + Sbjct: 1 MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ +LE+ + ++ D E YP L D P A+FV G L +A++GS Sbjct: 61 KNIQFDNLEKYLEKISCKVLTIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA G+ I SG+ARGID +H+AAL NG+++AVLG G + ++ Sbjct: 121 RKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRAALMNNGMTMAVLGCGPDIVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + +L ++E+ GA+++EFP P ++FP RNRIISGLS V+V+EAA +SG+L+ Sbjct: 181 PRENEKLMKQIIEK-GAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGREV A+PG I NP S G + LIKQGA LVT +IL+ L + + Sbjct: 240 TADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQK 299 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 S + ++LA + + ++ V + EV L LE+ G I ++P Sbjct: 300 KSKKVTLEV----NEKKVLAVLSEIPQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLP 355 Query: 356 GGYV 359 G Sbjct: 356 GKMY 359 >UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIT4_9FIRM Length = 357 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 179/365 (49%), Gaps = 13/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M D W+ L +S+L ++R+ + L GL ++ A+ Sbjct: 1 MRDLPFWVALSKVSTLGARRILRLIAYFGTAEKAFLASMDDLLAAGLPVKAARALCDERE 60 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + ++ YP L D P L+ G++ L + +A+VGSR Sbjct: 61 GLDPHRVAEEVHGSGFGVLTLACAGYPLLLAEIYDPPAVLYYRGDIDVLSTPCVAMVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G+T+ SG+ARGID AH AL G +IAVLG G + +P Sbjct: 121 KATEYGKNAALKLAGQLAAAGITVVSGMARGIDTWAHAGALGAGGPTIAVLGCGPDVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +L ++ GG ++SEFP P +FP RNRIISGLS+ +VVEAA +SG+L+T Sbjct: 181 PENLKLREKIV-SGGIILSEFPPGTQPKPGHFPLRNRIISGLSRATVVVEAAEKSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A CALE GREVFA+PG + +P S G H L+K+GA + + +IL L E Sbjct: 240 ADCALEHGREVFAVPGNVNSPYSRGCHRLLKEGAAMAEKAADILAALG--------MSEQ 291 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ +L + E D +A+R G P P++ L+ELELAG + +PG Sbjct: 292 ETAATKAVQLSDTQASVLETLQYEPAHFDEIADRCGLPAPQLAATLVELELAGLLRKLPG 351 Query: 357 GYVRL 361 + Sbjct: 352 NFFLR 356 >UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCA2_PLALI Length = 368 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 137/358 (38%), Positives = 195/358 (54%), Gaps = 5/358 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LSFPRKSIESS 63 L+LM I + R+ + + + L+Q GL+ A R L R + Sbjct: 10 LQLMLIPKIGPATYERLIQHLGSPTAVLEASAAVLEQAGLSSTLASRVSLGRDRAEARQT 69 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L E N + + YP +L P LF++G + A +A+VGSR+ S YGE Sbjct: 70 LQQCEALNIRATCLNRDDYPVRLKEIDRPPPVLFIQGSVTAADQLSVAIVGSRSPSVYGE 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + F LA GVTI SGLARG+DG+AH+AAL+ G ++AVLG G+N ++PR H LA Sbjct: 130 QMAKNFAGGLARAGVTIVSGLARGVDGLAHRAALEAGGRTLAVLGGGINQLYPREHIELA 189 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++EQ GAL+SE+ DVP +A FP+RNRIISGLS LV+EA+ +SGSL TAR A+EQ Sbjct: 190 RQVVEQ-GALISEYAPDVPAIAPQFPQRNRIISGLSLATLVIEASEKSGSLHTARHAMEQ 248 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 R+V A+PG + + S+G LI+ GAILV E++LE L + P + Sbjct: 249 HRDVLAVPGRVDSDASKGCLKLIRDGAILVRHVEDVLEALGHLSAPVQKPGGQVVQQPRE 308 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +LL VG E TPVD V + G ++ L LE+ + +PG +V Sbjct: 309 LLLNDQEQKLLQLVGIEATPVDTVLTQCGLEYSRALSTLTVLEIKKLVRRLPGNFVVR 366 >UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWA7_DESBD Length = 367 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 165/367 (44%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGL--TLRQAQRFLSFP 56 M + L L S L R+ D+ GL QA+ Sbjct: 1 MDEFSASLALRHTSGLGPRTWKRLLSHYGDALSAVSDSSFWTARGLVSARVQAEFVRGGW 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R+ + + YP L D P L+ G+L L +AVVGSR Sbjct: 61 REKAADEQRRAQSFGFPAVFFGDRAYPDFLREIPDPPLFLYYLGDLTLLSRPCVAVVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG L+ G+ + SG A+GID AH+ AL+ G +IAVLG GL+ ++P Sbjct: 121 GASRYGVDMAESMSAFLSASGICVVSGFAQGIDRAAHQGALRGVGGTIAVLGTGLDLVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + G +VSEF P NFP RNRI+SGLS GVLVVE AL SGSL+T Sbjct: 181 ASNTDLWKQVAAH-GLIVSEFAPGTRPDGINFPHRNRIVSGLSLGVLVVEGALGSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL Q R+VFALPGP +G H LI+QGA LV E+IL+ LQ L L Sbjct: 240 ANLALAQNRDVFALPGPANVKNYQGCHQLIRQGACLVQSGEDILQELQPRLGALCVPEAP 299 Query: 297 SFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ + + E VD + R G +V + LL +EL G + +P Sbjct: 300 VPEFLPREPDDPEQRVVHRLLAAGEALHVDTLTRRTGWAANKVSSTLLFMELQGLVRQLP 359 Query: 356 GGYVRLR 362 G Y L Sbjct: 360 GMYYVLA 366 >UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIS6_9BACT Length = 375 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 180/371 (48%), Gaps = 11/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E WL L S+ L + + + + + ++ R + Sbjct: 1 MEVLEAWLSLRSVKGLSDGTICTLVRHFGGPKEVLSASSSELRHVAGLRASVMTSLRNAP 60 Query: 61 E--------SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + + +E+ ++ YP +L D P L+V G L +A+ Sbjct: 61 DPSVVAHVRKEMRLIEKGASSIVTILDAAYPRRLAMIPDPPPVLYVRGTLPPADDHAVAI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR + G + F ++LA G TI SGLARG+D AH+ AL +IAV+G G++ Sbjct: 121 VGSRKATPAGALMTQEFSQSLAAMGFTIVSGLARGVDAAAHRGALTAKARTIAVVGCGVD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P H +L + E GA+VSE PL PPL Y+FPRRNRIISGLS GV+V EA +SG Sbjct: 181 RTYPPEHRQLRKDI-EVNGAVVSELPLGSPPLPYHFPRRNRIISGLSLGVIVSEANQKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TAR ALEQ REVFA+PG + N +G H LIKQGA LV E +++E L L Sbjct: 240 ALITARYALEQNREVFAIPGAVKNGKHQGAHSLIKQGAKLVEEAGDVVEELLLQLDGPFR 299 Query: 293 APENSF--YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + +LA V DE +D V +A EV++ LL LEL G Sbjct: 300 DRVKNAGFQETAVPVFTAKEQRVLALVHDEPVSIDEVLTQAPFDRAEVMSLLLSLELRGC 359 Query: 351 IAAVPGGYVRL 361 I VPG Sbjct: 360 IQQVPGSCYIR 370 >UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6X9Q0_9ENTR Length = 369 Score = 365 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 154/361 (42%), Positives = 222/361 (61%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIWLRL+ ++ + + + + + I+ VL+ GL Q +FL+ I Sbjct: 11 MNELEIWLRLLQVNRISIKTIQTTISLLKQSNKINHTVLKACGLNEIQRLQFLNVSLTRI 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WLE + +I E YP L + P ALF+ G L QLAV+GSR + Sbjct: 71 ERTFRWLESKENQIITFLDEQYPFLLKQIYNPPLALFISGNSELLSERQLAVIGSRQVTE 130 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG++W LF G+TITSGLA GIDG+ H+ AL+ G ++AVLG+GL I+P++HA Sbjct: 131 YGKKWAELFVRKFIGHGLTITSGLALGIDGIGHRVALENQGKTVAVLGSGLAHIYPKQHA 190 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 191 DLAERI-RHEGVLVSEYFPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 249 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ REVF LP P+GNP G HWLI+QGA L+TEP++IL +L+ L+W+ E + Sbjct: 250 IEQNREVFTLPAPLGNPAFSGNHWLIQQGACLLTEPDDILMHLECSLNWIQPELEVDAST 309 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ L +L VG + TPVD++A + P+ ++++ L ELE+ G I++ GGY++ Sbjct: 310 AT--ELNLTESRILGMVGYQSTPVDIIAAQLQLPITQIISVLTELEINGVISSAAGGYIK 367 Query: 361 L 361 + Sbjct: 368 V 368 >UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=Legionella RepID=A5IAY0_LEGPC Length = 361 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 145/369 (39%), Positives = 206/369 (55%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M + + L L + + ++++ + + + L++ GL AQ +F Sbjct: 1 MNNLQPLLALNRMKKIGPRTVLKLQKRWPDLNLMFQLSSVDLEEAGLPSWLAQTIKNFDP 60 Query: 58 KSIESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I++ L WL NHH++ DS +YP L D P L+ +GEL AL LA+VGSR Sbjct: 61 DFIKTDLDWLSSSENHHILTWDSPYYPALLKEIADPPFILYAKGELSALTQPNLAIVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R F ++ GV+I SGLA GID AH L+ G +IAVLG G++ I+P Sbjct: 121 NASVTGNENARAFSREISRHGVSIVSGLALGIDAHAHLGCLEGGGKTIAVLGTGIDCIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RRH +LA + E G L+SEFPL PP+A +FP RNRIISGLS +LV+EAA++SGSL+T Sbjct: 181 RRHLKLAEQITE-NGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ R+V A+PG I NP + G H+L++QGA LVT ++L+ L Sbjct: 240 ARMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLDEL-------KIEHHQ 292 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + +A L+ +G E T +D + R+G + +V + L ELEL G + AVPG Sbjct: 293 FASNKPIFSLASGKENLVKFIGFETTTIDQIIGRSGYSMEQVTSGLAELELKGAVMAVPG 352 Query: 357 GYVRLRRAC 365 GY+R Sbjct: 353 GYIRCEYER 361 >UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNG9_AKKM8 Length = 375 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 180/371 (48%), Gaps = 9/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E + L I L ++R+ A I G+ + A R S+ Sbjct: 1 MTPREAAIALNLIPGLGPVRIMRLLQVFASPELILESPSSLLMEIPGVGAQLACRISSWR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVG 114 + L + + + YP L A D P L+ G +AVVG Sbjct: 61 STVNPYRELELADNAGAAVTTVFDDSYPSSLRALPDPPIVLYSWGNWTGTDAERSIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG R LA G+T+ SGLARG+D AH A+ G +IAV+G GLN + Sbjct: 121 SRMATHYGRLCARNISHDLAEAGITVISGLARGVDTEAHTGAMDAEGRTIAVIGAGLNKL 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA + + GA+VSEFP+D+PP FP RNRI+SG S+ LVVEA+ RSG+L Sbjct: 181 YPRENRNLAQRIADGHGAVVSEFPMDLPPSRTTFPMRNRIVSGWSRATLVVEASGRSGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW---LP 291 +TAR A EQGR+VF +PGP+ S+G H LI+ GAIL T +IL+++ + + Sbjct: 241 ITARTAAEQGRDVFCIPGPVDRHSSDGCHALIRDGAILATGASDILQDMNWAVPEQGLPL 300 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 +P + + L E+L + +D + G+ + L ++++AG I Sbjct: 301 FSPCSPAGASTPPLPTLEEKEILHAIRLGFNTIDTLCTSLGKAAHTITPLLAKMQIAGQI 360 Query: 352 AAVPGGYVRLR 362 GGY + Sbjct: 361 TPDAGGYFSIN 371 >UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia RepID=D1P7V1_9ENTR Length = 373 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 152/361 (42%), Positives = 229/361 (63%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIW+RL ++ + + ++ I ++ +++ + +L++ GL Q +F P++ I Sbjct: 15 MNEQEIWIRLSLVNKVALEKVIEIISYLKQRNKVTHSILKECGLNEMQRLQFFHVPQQRI 74 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WL+ + +I + YP L T + P LFV G L Q+A+VGSR + Sbjct: 75 EITTRWLQNKENQMITVSAPQYPFLLKQTYNPPLLLFVIGNSELLSDRQIAIVGSRQMTE 134 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ W + F + + G+TITSGLA GIDG +HK AL+ G ++AVLG+GL ++P++H Sbjct: 135 YGKTWTKNFVKKFISYGLTITSGLALGIDGASHKTALEHGGKTVAVLGSGLANVYPKQHY 194 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 195 NLADEIKE-NGLLVSEYLPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 253 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ R++F LP P+GNP G HWL++QGA L++EP++IL +L+ L+W+ PE S S Sbjct: 254 IEQNRDLFTLPAPLGNPAFSGNHWLVQQGAYLLSEPDDILLHLECSLNWIQ--PELSIES 311 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + L +L VG +VTPVDV+A + P+ V++ L ELE++G I + GGY+R Sbjct: 312 TPNSEFNLTENRILGMVGYQVTPVDVIAGQLQLPISRVISILTELEISGDILSTAGGYIR 371 Query: 361 L 361 + Sbjct: 372 V 372 >UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7_FUSMR Length = 356 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 120/368 (32%), Positives = 187/368 (50%), Gaps = 17/368 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M E W RL + L R+ K I + + + L ++ S Sbjct: 1 MGALE-WYRLA-VKKLKDSSFRRVLEKFEKYEDIFKLDKIYLKKYCNLDEEDLEKIYSSK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +I L LE+ L+ + YP +L T P L+ G++ L ++ VVG+R Sbjct: 59 DVNILDELKKLEKNKISLLFIKDKEYPEELKNITKPPIFLYYRGDISLLSGKRIGVVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L GVT SGLA GIDG+ HK L+ G +IAV+G+GL+ I+P Sbjct: 119 RATSYGKIACEKLVRELVENGVTTVSGLANGIDGICHKKTLEFQGKTIAVVGSGLDIIYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ + E+ G L+SE+P+ P AYNFP RNRII G+S+G++V+E+ + GSL+T Sbjct: 179 YENRKIWEEIGEK-GLLLSEYPMGTEPFAYNFPMRNRIIVGISQGIVVIESKAKGGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A ALE+GREVFA+PG I +P SEG + LIK GA LVT+ ++IL + Sbjct: 238 AELALEEGREVFAVPGEIFSPASEGCNTLIKNSGAKLVTDVDDILVEFGW--------NR 289 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ D+ ++ + E +D + E EV++ L++LE+ I ++ Sbjct: 290 EKKLKEEKLDLTDYEKKIYNTLVKE-KNLDEIIEETSMKASEVLSILMDLEVKKIIVSIA 348 Query: 356 GGYVRLRR 363 GG R + Sbjct: 349 GGKYRRKY 356 >UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWB1_9DELT Length = 381 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 172/371 (46%), Gaps = 13/371 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--LQQTGLTLRQAQRFLS--FPR 57 + L L SL +I + A + GL + + Sbjct: 8 DEIWACLALSKTRSLGCKTWQKILEVFRSPAQALANSSHWAEMGLVSSSQAGIFNSGQWK 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + ++ ++ YP L P L+ G++ S LAVVGSR Sbjct: 68 SEAQREFERIQSGQEQVLIWSDSEYPEHLRHIAGPPVLLYYLGDISLAKSPSLAVVGSRN 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG C L+ +G+TI SG A GID AH+AAL G ++AVLG G++ I+P Sbjct: 128 SSAYGREMTSKICRELSEKGITIVSGFAEGIDREAHRAALSAPGSTVAVLGTGIDLIYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + + G ++SEFP P A+NFP RNRIISGLS GVLV++A ++SGS++TA Sbjct: 188 INQDLWTHIRDH-GLILSEFPRGTRPDAHNFPYRNRIISGLSLGVLVMQAEIKSGSMLTA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 AL+ REVFALPG + PG G + LI+QGAILV ++ILE LQ GL ++ Sbjct: 247 GYALDHNREVFALPGQVNLPGFSGCNQLIRQGAILVRTAQDILEALQLGLKNHLQQENDN 306 Query: 298 FYSPDQQDV--------ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 S + + E T +D +++ + L+ LE+ G Sbjct: 307 EMSAPVPAEPALPGDLTSEEKAVAGELINRERTHIDDLSQCLDLSPSSISRILVNLEIRG 366 Query: 350 WIAAVPGGYVR 360 + PG Y + Sbjct: 367 MVRREPGMYYK 377 >UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSS8_9GAMM Length = 373 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 194/371 (52%), Gaps = 10/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LSFP 56 M + WLRL +L R+ + + L++ GL+ Sbjct: 1 MDELSAWLRLWLAPNLGAATSARLVSTAGSAPAVLRMRPNQLRECGLSDEAIAFLQAEQS 60 Query: 57 RKSIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 S+ + W+E + LI YPPQL P L V G++ L QLA+VGS Sbjct: 61 PASVAQARDWVEAESARHLIYRGHPDYPPQLEDIARPPAVLAVLGDVSLLRDPQLAMVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ S G R F + LA +G+ +TSGLA GIDG H+ AL G ++AV+ G + ++ Sbjct: 121 RSASRQGAESARAFAKHLAAQGLVMTSGLALGIDGACHEGALASTGSTVAVMATGADRVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +H LA ++ +GGALV+EFPL P +FP+RNR+I+GLS GVLVVEA LRSGSL+ Sbjct: 181 PAKHRDLAHRIVAEGGALVTEFPLGSTPQKSHFPQRNRVIAGLSTGVLVVEATLRSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A EQGREVFA+PG I P ++G H LIKQGA LV E+ILE L L Sbjct: 241 TARFAQEQGREVFAMPGSIHQPTAKGCHALIKQGAKLVESAEDILEELAPQLRARLAEGV 300 Query: 296 NSFYSPDQ-----QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + LL +G + +D + ++ E+ + LL LEL G Sbjct: 301 ETSVSASEALSADPPLDSDHEALLQAMGFDPVTLDALVQQTDFDASELASMLLILELEGR 360 Query: 351 IAAVPGGYVRL 361 ++A PGG + Sbjct: 361 VSAEPGGRYQR 371 >UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS RepID=A7BSD4_9GAMM Length = 420 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 134/410 (32%), Positives = 191/410 (46%), Gaps = 52/410 (12%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLR--QAQRFLSFPRKS 59 + E WL L+ + + VR+ + Q ++ + + Sbjct: 7 EEEYWLALLRAPGVGPVNFVRLIKNFESPRGVFEAGYGQWLSFNMKEPLLKYLQYPDWTA 66 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 IE + WL QPNH+L+ DS YP +L + P LFV G++ L S Q+A+VG+R S Sbjct: 67 IEKDMQWLIQPNHYLLTIDSPEYPSRLREINNPPPVLFVHGDIALLSSQQIAMVGTRKPS 126 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + + F E L+ +G TITSG+A GID ++H AL +G +IAV G GL+ ++P +H Sbjct: 127 PEGAQTAKEFAEYLSFQGFTITSGMAYGIDAISHWGALACSGKTIAVAGTGLDRVYPAKH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + E GAL+SE PL P FP R+RI+SGLS G LV+EA +SG+L TAR Sbjct: 187 HELAHKIAET-GALISELPLGTPVHRSQFPIRSRIVSGLSLGTLVIEAPEKSGALYTARH 245 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A Q REVFA+PG I NP +G H LIK+GA LV +I E L+ H E+ Sbjct: 246 ATNQRREVFAIPGSIYNPLVKGCHQLIKEGAKLVETVADIFEELRPIHHHSVSQTESETK 305 Query: 300 ------------------------------------------------SPDQQDVALPFP 311 D D+ + Sbjct: 306 VRVSFPITSTKLTTIEQTDSSNNITIIDKIDSFAIPNEKMAPGNLIKTKNDLSDLEPDYI 365 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 LL + T +D + E++G ++ + LL LEL G +A GG Sbjct: 366 RLLGYLEAGPTSIDNLVEQSGLTAGDISSMLLILELRGLVATQSGGLYTR 415 >UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C896_9FIRM Length = 383 Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 24/379 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-----QQTGLTLRQAQRF-LSF 55 ++ E WL LMSI ++ + + + I + +G+TL A R + Sbjct: 1 MNIEKWLWLMSIQNIGAKRAINLYDYFGSIDEIYLNDDINKYTKVSGITLDIATRLTMDK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQLAVVG 114 + + + I D ++YP L DYP LF G L + +++VG Sbjct: 61 DLNKFNRLIDKMYNEGINYITMDDKYYPYSLKEIYDYPPILFYRGKNLFVEENPMISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + R F + +G+ + SG+A GID AHK ALQ G +IAVLG+G++ I Sbjct: 121 TRKASNYGIQVARDFAREFSNKGLDVVSGMAAGIDTYAHKGALQGFGDTIAVLGSGVDKI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ +A+L ++E+ G ++SE+ PL+++FP RNRIISGLS G +V+EA+ +SGSL Sbjct: 181 YPKSNAKLYDEIIER-GMVISEYFPGTEPLSHHFPARNRIISGLSHGTIVIEASYKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQGREV+++PG I + EG + L+K GA L+ ++LE+L + L Sbjct: 240 ITARYANEQGREVYSVPGNITSALCEGSNSLLKDGAKLILSANDVLEDLYYVLDRPNMER 299 Query: 295 ENSFYSPDQQ----------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + +++ + + D D++ E G + + Sbjct: 300 ITDIIEAKEDRSFRQIKKEVNILDKYELSDDERNICQAILDGNNTADLINENLGLEINLI 359 Query: 339 VTQLLELELAGWIAAVPGG 357 + L LE+ G + + Sbjct: 360 NSVLTMLEIRGIVISTGAN 378 >UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSK6_9FIRM Length = 366 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 129/367 (35%), Positives = 190/367 (51%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + + I L + + + + Q LT + Q Sbjct: 1 MGQEKYEVWFAGIRGLGARKKYLLHEALKSCRNAYYIEETQLKKFPFLTEKDGQEIRQAQ 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E +++ +IP SE YPP+LL D+P ALFV+G+L + + A++G+ Sbjct: 61 KRKDPEKICEEMKKKGIRIIPYYSEKYPPKLLQLADFPFALFVKGKLPGKDTEKAAIIGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YGE++ + LA GV + SGLARGIDG+ H+ AL G + AVLG G++ + Sbjct: 121 RNCTAYGEKYAVEYGRKLAQAGVDVISGLARGIDGMGHRGALMEKGKTFAVLGCGVDICY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L +LEQGG ++SEFP PPLA NFP RNRIISGLS +L++EA RSGSL+ Sbjct: 181 PREHIGLYMDILEQGGGILSEFPPGTPPLAVNFPLRNRIISGLSDVILIMEARERSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG+EV+ALPGP+ +P S G + LI+QGA ++ E +L L E Sbjct: 241 TADLALEQGKEVYALPGPVDSPLSTGCNRLIQQGAGVLLSAENLLNEWGIMPDNLCRKTE 300 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + + + VG V+ + G + +++ L+ LEL G+I V Sbjct: 301 IKPDKNKKTLESEDE-LVYSCVGLYPKNVEHLVLETGLEIRKLMRVLVSLELQGYIKEVS 359 Query: 356 GGYVRLR 362 Y R Sbjct: 360 KNYYIRR 366 >UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3PGY9_CELJU Length = 387 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 194/379 (51%), Gaps = 22/379 (5%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES--- 62 L ++ + ++ + L + Q + R S Sbjct: 9 LLILRLPETGTVTYWKLVDHFGSPEAALNQPAPYLEAFLRPQALQALEEYRRHPANSALA 68 Query: 63 -----SLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 L L+ + H +P + E YP L + P LFV G+ L QLA+VGSR Sbjct: 69 QKVAGDLEQLDANPDIHCLPLEHELYPELLRQIPNPPPLLFVRGDPGCLGLPQLAIVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R F LA RG TITSGLA GID AH+ AL+ +G ++AV+G G++ I+P Sbjct: 129 NPTRSGTDNARHFAAYLAERGFTITSGLALGIDAAAHRGALEASGKTVAVMGTGIDRIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA ++ QGGALVSEFPL A NFP+RNR+ISGLS G L+VEAA++SGSL+T Sbjct: 189 GRHRTLAQQIIAQGGALVSEFPLGTSSHAGNFPQRNRLISGLSLGSLIVEAAVQSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q REVFA+PG I NP + G H LI+QGA LV ++I+E L L + + Sbjct: 249 ASFALQQNREVFAIPGSIHNPLARGCHQLIRQGAKLVETGDDIVEELDGLLGFHRQQLQR 308 Query: 297 SFYSPDQQ-----------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 S Q ++ +LL +G + +D + ER + QL+ L Sbjct: 309 SAVKQVQPLPTASTNMPLAELDPAATQLLEAMGYDPVNIDTLVERTSLDAGIIAAQLVSL 368 Query: 346 ELAGWIAAVPGGYVRLRRA 364 EL+G I + GGY+R+ A Sbjct: 369 ELSGAICTIAGGYLRVPNA 387 >UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia RepID=A4XIW6_CALS8 Length = 380 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 7/363 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID--AVVLQQTGLTLRQAQRFLSFPRKS 59 WL L +I + +I + G + Q K Sbjct: 21 ERKLYWLWLYTIKGIGPKKFRQIKQEFGSLENAYLNRKEFNLEGFSSSIKQLIRDSDLKE 80 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAH 118 E L + + + ++I D FYP +L P +F +G ++ L + ++++VG+R Sbjct: 81 AEKVLEFCIKNSINIILEDDVFYPTELKNFDHSPVIIFAKGNVNVLKAQYKISMVGTREP 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 ++YG+R + +A + + + SG+ARGID H AL+ NG +IAVLG G++ ++P+ Sbjct: 141 TYYGKRVAKDLAGLVAQQNIVVVSGMARGIDTFCHMGALE-NGTTIAVLGCGVDIVYPKE 199 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +L ++E+ G ++SEF P NFP+RNRI++ LS ++V+EAA +SG+ T Sbjct: 200 NYKLYNQIVEK-GCVISEFLPKTLPDRMNFPQRNRIVAMLSPCLVVIEAAEKSGTFSTVD 258 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALE G+EVFA+PG I + S G + LIK+GA +V ++ LE+L+ + P Sbjct: 259 FALEMGKEVFAVPGNIFSQKSSGTNRLIKEGARIVCSYQDFLEDLREIYNLFPKQISLFD 318 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + +LL +VG+ ++ + +V + + LE+ G + G Sbjct: 319 VEEELSEEEYTILKLLDSVGEA--HIENLILLTNWSAGKVASVITSLEIKGKVVRERGNV 376 Query: 359 VRL 361 + Sbjct: 377 IVR 379 >UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM03_9FIRM Length = 363 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 12/364 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M+D L L M + + ++ L + FL++ Sbjct: 1 MMDI-FAAALPGCPRLGAKHMRTLIEAFGTAEDVWKASDKEIVESHLLKGKTEASFLAYR 59 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E L + + + + YPP L T + P LF +G +A+VGS Sbjct: 60 KETEPEEIGEKLYRLQIRCVTWEDDLYPPLLQTTANPPAVLFYKGNNPVF-EKTVAIVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA GVT+ SG ARGID AH+ AL+ ++ L GL+ ++ Sbjct: 119 RKATPYGVQTAERIACGLAENGVTVISGGARGIDSAAHEGALRGESPTVVALACGLDHVY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L +++ GG ++SE+P PPL FP RNRII+G+S+G+LVVEAA RSG+L+ Sbjct: 179 PPENKNLFQKIIDNGGTIISEYPPGTPPLGRQFPARNRIIAGMSRGILVVEAAERSGALI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 T+ ALE+GR+VF++PG I S G + LI+ GAI T E+IL + + Sbjct: 239 TSDFALEEGRDVFSVPGNIWLDSSRGTNHLIRSGAICCTSYEDILSEYGW-----NEKSI 293 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +S +Q E + + +++G V ++ LL L+L G+I Sbjct: 294 SSKKESPEQLTLEEEVVYRFCCTGEEVTAEDILQQSGMSVMKITMLLLRLQLKGFIKETG 353 Query: 356 GGYV 359 G Sbjct: 354 SGRF 357 >UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B4D957_9BACT Length = 362 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 183/364 (50%), Gaps = 10/364 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M TE + L + + + R+ + Q G+ A + Sbjct: 1 MNSTEASIALNMVPGVGPVRLRRLLEVFETPEQVLLAREGQLRAVDGIGAEVAAGIAHWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K + + L +++ +I S YP L ++ P L++ GEL + VVGS Sbjct: 61 EKVDLTAELARIQEFGARVITQQSPEYPRMLQEISNPPIVLYIWGELTERDQQAIGVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + LA G+T+ SGLARGID AH+ AL G ++AV+G+GL ++ Sbjct: 121 RKTSHYGLECAKKLSYQLAYAGLTVVSGLARGIDTAAHQGALAAQGRTVAVIGSGLMDLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + GA+VSEFP+ PP FP RNRI++G G LVVEA L+SG+L+ Sbjct: 181 PPENQALAEKITSS-GAVVSEFPMTFPPSTQTFPYRNRIVAGWGSGTLVVEAGLKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V+A+PG I P S G + LI+QGA LVT +IL++L+ Sbjct: 240 TATQALEHGRSVYAVPGQIDRPTSAGSNRLIQQGAKLVTGAADILDDLRILAPEPRKMST 299 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 P + +LA+V + TP+D++ ++G P+P+V + LL LE+ + +P Sbjct: 300 PVSAIPLSTE----EQSILASVDNAETPIDLIVTKSGLPMPKVASTLLALEMKRLVKQLP 355 Query: 356 GGYV 359 G Sbjct: 356 GQQF 359 >UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella RepID=A8FP77_SHESH Length = 368 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 149/361 (41%), Positives = 215/361 (59%), Gaps = 4/361 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWV--AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 WL + ++S L + ++ +++ + L +R L+ ++S+L Sbjct: 9 WLVVSAVSGLGPARIQQLLNYMDVEELRQRLEHEKDALPLPESLLKRELAPDFSLVDSAL 68 Query: 65 CWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 WL+ +HH++ D YP L +D P LF++GE L +AVVGSRA + G Sbjct: 69 DWLQSSSHHHIVTLDDPHYPNLLKQISDPPSILFIKGEPDTLLLPSIAVVGSRAATSAGL 128 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + L + G +++SG+A G+DG AH+A + + +IAVLG G+ I+PRRH +L Sbjct: 129 QSAYQLAGELGSIGFSVSSGMAAGVDGAAHQACIDNSAKTIAVLGTGVEVIYPRRHKKLY 188 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + + GA++SEF DV P A NFP+RNRIISGLS G LVVEA RSGSL+TAR ALEQ Sbjct: 189 EKI-QCHGAVISEFWPDVKPYAGNFPKRNRIISGLSLGTLVVEACRRSGSLITARLALEQ 247 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I S+G H L++ GA LV +I+E + + + ++ + + Sbjct: 248 GREVFAVPGNILGGQSQGCHDLLRDGAKLVENAADIIEEVSVLCDFHLEELKSRHHIGGE 307 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 LPF LLA+VG E TP+DVV E +G+ + V+ Q+LELEL GW+A VPGGYVRLRR Sbjct: 308 NASDLPFTSLLASVGYETTPIDVVVEHSGKAIELVLEQMLELELQGWVAVVPGGYVRLRR 367 Query: 364 A 364 + Sbjct: 368 S 368 >UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacteria RepID=A1WZH5_HALHL Length = 388 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 184/365 (50%), Gaps = 8/365 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 DT L L + + R+ + + L+ GL+ L+ Sbjct: 24 DDTLYALALARVPGVGPRTWSRLMAAFGGPAAVFRAGRSALRSLGLSAATESGILAPDWN 83 Query: 59 SIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + WL+ P L+ YP +L D P LFV G+ LH Q+A+VGSR Sbjct: 84 AARTDADWLDGPGPRHLLRLAQPGYPRRLAEIPDPPPLLFVTGDPTTLHRPQVAIVGSRH 143 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R LA G+ TSGLA GID AH+ AL+ G ++AV+G + ++P Sbjct: 144 ATASGRDLARNLAGGLARAGIATTSGLATGIDAAAHRGALEAGGTTLAVVGTEPDQVYPA 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH RL A + GA++ E P PLA +FPRRNRI+SGLS GV+V++A SGSL+TA Sbjct: 204 RHQRLHAEITAS-GAVLGELPPGSGPLAAHFPRRNRIVSGLSLGVVVIQAGRHSGSLITA 262 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R A EQGREVFA+PG I +P + G H L++ GA L+ ++IL+ + P + Sbjct: 263 RLAAEQGREVFAVPGSIHDPLARGCHALLRDGAKLLESIDDILKEFPGTVCEAPVNAPSE 322 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S +L +G + +D + +R+G + + + LL +EL G + AVPGG Sbjct: 323 STS---PAADPDEARILEALGHDPLTLDTLQQRSGLTLDRLSSILLTMELKGLLTAVPGG 379 Query: 358 YVRLR 362 + R Sbjct: 380 RYQRR 384 >UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA05_KANKD Length = 363 Score = 359 bits (923), Expect = 6e-98, Method: Composition-based stats. Identities = 150/367 (40%), Positives = 204/367 (55%), Gaps = 9/367 (2%) Query: 1 MVDTEI--WLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M E+ WL L I ++ + ++ + + + LQ+ G A++ S Sbjct: 1 MEQVELRHWLALSHI-NIGANKLLAFLEAGYAIGQLFELSEQALQEHGFRAGLAKKLSSV 59 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I+ L W + N L+P S YP L D P LFV+G+ L+ Q+A+VGS Sbjct: 60 TDDIIDQDLEWFDSENKSLVPITSRDYPALLREIPDPPKLLFVQGDKSLLNRHQIAIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + G+ F +TLA G +TSG+A G+DG+AH+AAL V +IAV+G GL+ ++ Sbjct: 120 RNPTAQGKDNTCEFAKTLAAAGAVVTSGMALGVDGIAHQAALDVGQPTIAVVGTGLDRVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P RH +A + Q GALVSEF L P A NFP RNRII G+S G LVVEAA+RSGSL+ Sbjct: 180 PARHKEMAIQI-SQQGALVSEFALGTPVNASNFPVRNRIICGMSLGTLVVEAAIRSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+EQGREVFA+PG I N + G H +IKQGA LV EEI+E L W + E Sbjct: 239 TARLAMEQGREVFAIPGSIHNTLARGCHSIIKQGAKLVETAEEIIEELGALATWQTEHNE 298 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + +L V D T D + +R+G + V LL LEL +IA+VP Sbjct: 299 QAEAQDLVLEKEYQE--ILQYVDDSTTSADTIIQRSGLEIEVVSHMLLLLELNNYIASVP 356 Query: 356 GGYVRLR 362 GGY R+R Sbjct: 357 GGYQRVR 363 >UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5F1_EUBE2 Length = 379 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 109/378 (28%), Positives = 176/378 (46%), Gaps = 17/378 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SF 55 M + W + +I+ + + + + I + G+ + + S Sbjct: 1 MKEDYYWYWVNNIAGISNMKLRTLFNAFDTPEQIYKASDKLLNSVSGIKEKDVSAIIESR 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + I LE+ YP QL+ DYP L+ +G L + +A+VG+ Sbjct: 61 NNEYIYRGYNDLERMKIKFTYPGKNDYPEQLMNIYDYPYILYYKGRLPQANVPAIAIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + + A G+ + SG+A GID A + A+ G S+AVLG G++ + Sbjct: 121 RNCTEYGRTIADMLAKCFADMGIQVISGMALGIDAAAQRGAVNKGGYSLAVLGCGVDVCY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + L L GG ++SE+P PP A FP RNRIISG++ ++VVEA +SGSL+ Sbjct: 181 PRSNIDLYTQLQNAGG-IMSEYPPGTPPRAGQFPMRNRIISGIADALIVVEARQKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL--ENLQFGLHWLPDA 293 TA ALEQ R+V+ +PG IG+ SEG LIK+GA ++T P ++ E++ L+ Sbjct: 240 TADQALEQNRDVYVVPGRIGDSLSEGCLKLIKEGAQMITSPMDVCATESINRYLNKNIKQ 299 Query: 294 PENSFYSPD---------QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 + D + +A P + + + ++ + + + E LLE Sbjct: 300 CDFPNDLNDAGIFEGNLKKSGLASPKNMVYSQINLFPVSLETIVNNSRISLVEAEGILLE 359 Query: 345 LELAGWIAAVPGGYVRLR 362 LEL G I V Y + Sbjct: 360 LELDGLIEEVSKNYYIRK 377 >UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria RepID=Q5N3V3_SYNP6 Length = 406 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 16/369 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLS-FPR 57 ++ L L + L + R+ +L+ G+ L A+ + + Sbjct: 31 ESLYCLALSHVPRLGPALLRRLLMHFGCFEAAWEAPTTALLEVDGIGLLLAEAIATVRQQ 90 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVV 113 E+ ++ N H + YP L P L+ G L + + VV Sbjct: 91 HQPEALWEQHQRQNPHFLLWTDPAYPRLLREIPTPPPVLYYRGNLDLIQPPLDAVAIGVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YG RW +A G T+ SGLA G+D AH+A L+ G ++AVLG G+N Sbjct: 151 GTRDPSPYGRRWTGKLSGAIAQAGYTVISGLAYGVDTEAHQACLEARGKTVAVLGTGVNV 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ L ++LEQGG ++SE P P +FP RNRII+GLS+ +LV EA RSG+ Sbjct: 211 IYPPQNRALYEAILEQGGLILSEQPSGTQPDRGSFPARNRIIAGLSRALLVTEAPGRSGA 270 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A E R+V+ LP + NP + G LI+QGA + +L+ L+ P + Sbjct: 271 LITAHLANEFCRDVYILPNSLDNPKAAGCLSLIQQGAQPILGSGHLLDWLRQLPPLDPQS 330 Query: 294 P-------ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P + D++ ++ A + D+ D + E++G +V L LE Sbjct: 331 PPLMPSAVPSQEVEEAIADLSPEQAQVYALLSDQPISKDDIVEQSGLDFHQVQIHLTHLE 390 Query: 347 LAGWIAAVP 355 + G +P Sbjct: 391 ILGLAEVLP 399 >UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Persephonella marina EX-H1 RepID=C0QTM1_PERMH Length = 352 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 20/365 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPR- 57 M + ++L I + + + + +I + + + A+ L + Sbjct: 1 MSAIDY-IQLSYIKGIGNKTLKLLINTFGSPENIFQLSFSELSSVVGSSVAELILKRDKS 59 Query: 58 --KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K E E+ +I + YP L D P L+ +G L + ++VVGS Sbjct: 60 LKKKAEEEFLRAEKSGVKIIHFNDHSYPELLREIPDPPLYLYCKGRLDL--ARAVSVVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + L+ + V I SG+A GID +AH+ AL+ + ++ AVLG G++ + Sbjct: 118 RRFTSYGKTVTKQIVSYLSDQNVNIVSGMALGIDSIAHETALERSCLTTAVLGCGIDIAY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L ++E GA++SEFP+ PP YNFP RNR ++G+S +V EA+ +SG+L+ Sbjct: 178 PPENKKLYERIIE-NGAVISEFPMGTPPYKYNFPVRNRTVAGISYATIVTEASEKSGALI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GR VF++P I NP ++G + LIK GAI V + E I ENL + Sbjct: 237 TARLANDYGRVVFSVPANINNPLAKGNNILIKDGAIPVVDMESIDENLPYIKRSDK---- 292 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +++ ++L + +D+++E+ V +++ L ++EL G I + Sbjct: 293 ------EEINLSEIEKKILFILSS-PEHIDIISEKMNISVSDLMVILFDMELKGLITSEN 345 Query: 356 GGYVR 360 G Y+R Sbjct: 346 GIYMR 350 >UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alteromonadales RepID=Q3IDI0_PSEHT Length = 362 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 143/361 (39%), Positives = 193/361 (53%), Gaps = 8/361 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 WL L ++ ++ + + L Q GL+ QA L + I Sbjct: 7 KLAHWLAFYMCKGLGIKTLLALSKNHSLESLFGLSHQQLLQLGLSANQATNLLHTNWQQI 66 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + N +I YP L P LF +G++ L S Q+A+VGSR + Sbjct: 67 THYEQLILHNNITVISIFDAAYPEDLKQIASAPLLLFCKGDVSFLTSPQIAIVGSRNATP 126 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G F L G+TITSG+ARGIDG AHK AL +G +IAVLG G++ +P++H Sbjct: 127 TGLEIAAEFAYQLTLAGITITSGMARGIDGAAHKGALAGSGKTIAVLGTGVDIYYPKQHK 186 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L +LEQ G LVSEF A+NFPRRNRIISGLS GVL+VEA ++SGSL+T R A Sbjct: 187 LLTNQVLEQ-GLLVSEFLPGTAANAHNFPRRNRIISGLSLGVLIVEAEIKSGSLITVRYA 245 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQ +EVFA+PG I NP ++ H+LIKQGA LV +IL+ + F PE S + Sbjct: 246 LEQNKEVFAVPGSIKNPLAQASHFLIKQGAKLVENVSDILDEVSFAYQSGFLTPEQSTQT 305 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 E+L ++G EVT VD + RA P+ +V +LL+LEL I V GY+R Sbjct: 306 -----NKDSQCEVLNSIGFEVTSVDDIVRRAQWPIDKVQARLLDLELDDQIERVLDGYIR 360 Query: 361 L 361 + Sbjct: 361 V 361 >UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1NY90_9DELT Length = 381 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 125/375 (33%), Positives = 178/375 (47%), Gaps = 13/375 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 WL L+ L R+ + I A + GL A+ + Sbjct: 7 KRLLDWLTLLFTPGLGPVAAGRLLAGYGGMAAILAATAKDLQAHGLRPASAEALAQGSAR 66 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + L + + H + D YP L +D P L+ GEL AL +AVVGSRA Sbjct: 67 PRAQQELARIRRTGLHCLTLDDPAYPTLLREISDPPLVLYGRGELQALKRPAVAVVGSRA 126 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ LA G T+ SG A GID AH+ AL+ G + AVLG GL+ ++P Sbjct: 127 ATTYGKKIASRLGAELAAAGFTVLSGGALGIDSAAHQGALEAGGTTAAVLGCGLDVVYPP 186 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ +L ++ Q G L+ E+PL P A+ FP RNRIISGL+ G +VVEAA RSG+L+TA Sbjct: 187 QNRQLFHTIGRQRGLLLGEYPLGTQPEAFRFPARNRIISGLAVGCVVVEAARRSGALITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------QFGLH 288 +LE GREV A+PG I SEG H LI++GA LV +E+L+ L Sbjct: 247 EMSLEHGREVMAVPGRIDTAKSEGCHRLIQEGAKLVHRFDELLQELLASPLTARFLPAKP 306 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + +P+ LLA + ++ + P P+V LLELE+ Sbjct: 307 ATASSAAAPTTTPEATPANAEEQALLATLDGYPRDIEEIIAACRLPAPKVNALLLELEIR 366 Query: 349 GWIAAVPGGYVRLRR 363 G + + PG R Sbjct: 367 GLVESAPGPQYRRAS 381 >UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8D6_9PLAN Length = 401 Score = 358 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 30/389 (7%) Query: 3 DTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP- 56 + +W +RL + + + + + G+ + Q+ S P Sbjct: 14 ENSLWEMRLAMLDGVGPRTRFNLVDRFGSAQEVFTASQHELRMVTGVGPKVVQQIQSPPA 73 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +E L ++P E YPP L+ D PG L+ +G L A +A+VG+R Sbjct: 74 WQEVEKLLDECTSLGIEVVPLADERYPPSLVNLPDPPGVLYQQGALQASDRQAIAIVGTR 133 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + F L+ G TI SGLARGID AH+ AL G +IAVLG+GL I+P Sbjct: 134 HATPYGLAQAKHFAYALSRAGYTIVSGLARGIDAAAHRGALDAGGRTIAVLGSGLACIYP 193 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + E+ GAL+SE P PP ++FP+RNRI++GLS GV+VVEAA RSG+L++ Sbjct: 194 PEHLDLAKEIAEK-GALLSEQPPHSPPTRFSFPQRNRIVTGLSIGVVVVEAAERSGALIS 252 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL------ 290 R A EQGREVFA+PG I + S+G H LI++GA L+ E +LE L+ Sbjct: 253 GRLAAEQGREVFAIPGRIDSRMSKGCHQLIREGAALIESVEHVLEQLESLGRDDLVPPSR 312 Query: 291 -----------------PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 A +P D++ +++ + E +D V R+ Sbjct: 313 VRGANAKQRSLPSDSSSDSAAAPPKLAPIPADLSAEERKIVELLSAEPMLIDQVTVRSKL 372 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLR 362 P+ V++ L LE+ I+ V G V R Sbjct: 373 PISRVLSTLSVLEMKRLISRVGGNQVMRR 401 >UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 Length = 398 Score = 358 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 172/395 (43%), Gaps = 36/395 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPRK 58 + WL + + + R+A + G + ++ + Sbjct: 5 EQAYWLAWSQVKGVGPVLLKRLAQHFELLENAWKARPIALGEVEGFGHKMIEKIIGQRNN 64 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVV 113 + L +Q N + D YP L P L+ G L S + +V Sbjct: 65 LNPFQFLEEHQQKNPQFLTPDDPDYPRLLWEIPSPPPVLYYLGRLDHRESQGQIPGVGIV 124 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G RW R + L G TI SGLA GID AH + L+VNG +IAVLG GL+ Sbjct: 125 GTRYPTDHGSRWTRKISQALVKSGFTIVSGLAAGIDADAHSSCLRVNGRTIAVLGTGLDL 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ +L + + G ++SE+P+ P NFP RNRII+GLS+ VLV+EA +SG+ Sbjct: 185 IYPPQNRQLFEQIAAE-GLILSEYPVGSKPERGNFPARNRIIAGLSRAVLVMEAPPKSGA 243 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ A E R+VF+LP + G LI GA ++ ++L +L Sbjct: 244 LITAKYANEFNRDVFSLPNSPDVQEAHGCLNLIHNGAEVILSENQLLASLGAIPLLDQGQ 303 Query: 294 PE--------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 + + +D+ ++LA V +E T +D + Sbjct: 304 EQKILPGDRQIGYLDQTNVPTLTTGARGKQPLTEPPEDLEPTLKKILAAVQEEPTALDQI 363 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +V LL+LE+ G ++ PG + R Sbjct: 364 VAVTALAIGDVSAGLLQLEILGLVSQEPGMRYQRR 398 >UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AU6_COLP3 Length = 383 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 146/376 (38%), Positives = 206/376 (54%), Gaps = 16/376 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVA-----KQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 + E WL L + L + + + +V+ L+++Q F Sbjct: 8 NIEYWLALKFVPRLAIHKKIALVETFGLIALFSLDNKPSVLSSANNLSVKQLHAFHQPDW 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++I + N +I D +YP L D P +F++G L++ Q+AVVGSRA Sbjct: 68 QTITHIIHASAACNSAIICYDDTYYPQLLKQIYDPPLVIFMQGNPLLLNAPQVAVVGSRA 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G C+ LA ITSGLA GID AH+ AL +IAV+ GL+ ++P Sbjct: 128 ASVGGRDTAFKICQQLAQHNFIITSGLALGIDAAAHRGALSEPASTIAVVATGLDQVYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA +++ GA++SEF A +FP+RNR+ISGLS GVLVVEA L+SGSL+TA Sbjct: 188 RHHSLAQKIIDSSGAIISEFVPGTQARAGHFPKRNRLISGLSLGVLVVEAELKSGSLITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN----------LQFGL 287 RCALEQ R+VFA+P I N ++G HWLIKQGA LV + +I++ L+ L Sbjct: 248 RCALEQNRDVFAIPSSIENKQAKGCHWLIKQGAKLVEQCADIIDEFAFADKPSLHLKSEL 307 Query: 288 HWLPDAPENSFYSPDQQDVA-LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 L A ++ D+ + L LL +VG E+TPVD V R+ PV EV+T+L LE Sbjct: 308 KPLKSATHSTHKGGDEINQKVLCNDALLDSVGFEITPVDKVVLRSELPVEEVLTRLTMLE 367 Query: 347 LAGWIAAVPGGYVRLR 362 L G ++AVPGGY+R + Sbjct: 368 LNGLVSAVPGGYIRTQ 383 >UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMW3_9PLAN Length = 407 Score = 356 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 122/362 (33%), Positives = 190/362 (52%), Gaps = 8/362 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIESS 63 LRL +S + + + + A + G+ + +Q+ + I+ Sbjct: 48 LRLALVSGVGPRTSQVLLERFGTHAGVLAATRSELERVSGVGPKLSQKITTAGEIDIDRE 107 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ + YP L D P LF+ G++ + +A+VG+R S YG Sbjct: 108 ISLCVDFDVDIMALEDARYPHLLTEIPDPPSILFLRGDISPADAMSVAIVGTRHASSYGL 167 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 F LA G T+ SGLARGID AH+ AL+ G +IA L +GL +I+P H LA Sbjct: 168 AQAERFGYELAKAGFTVVSGLARGIDAAAHRGALRAGGRTIAFLASGLRSIYPPEHETLA 227 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + EQ GAL+SE P PL+ FP+RNR+I+G+S GV+VVEAA RSG+L++ARCA+EQ Sbjct: 228 DEVAEQ-GALLSESPPLAKPLSGAFPQRNRLITGMSLGVIVVEAATRSGALISARCAMEQ 286 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I N + G H L+K GA LV +++LE L + ++P + Sbjct: 287 GREVFAIPGRIDNANARGCHRLLKDGAKLVESIDDVLEELGPLTRPAKTEDGKTIHAPIE 346 Query: 304 QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + ++ + D T +D V R+G P+ V++ + LE+ + + G V ++ Sbjct: 347 LQLNEMETAIMQALADGQPTDMDSVVSRSGLPIQNVLSTICVLEMRRLVRRLSG--VSVQ 404 Query: 363 RA 364 RA Sbjct: 405 RA 406 >UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI82_DESAH Length = 372 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 9/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-----FP 56 + W + SI + R+ + +I A + +Q+ ++ Sbjct: 5 DNYLPWFIVKSIPGIGNHLYKRLINRFKTPENILAAKAAELKTIRGMSQKAITGIVHCTV 64 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K E +L + + ++ + YPP L D P +GEL+ +++VGSR Sbjct: 65 KKKAEIALATVLRGKIRVVTMNDPTYPPLLREIADPPPFFTFQGELN-ADLPCISIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG LA G + SG+ARGID AH AL G ++A+LG+GLN I+P Sbjct: 124 NATAYGLESAYRLGYDLAVLGFQVVSGMARGIDTAAHHGALAAKGKTMAILGSGLNWIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF D P NFP RNR+I+G+S G +VVEAA +SGSL+T Sbjct: 184 RENQSLFQAIC-QTGVVISEFSPDTRPEPRNFPIRNRLIAGISTGTIVVEAANKSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP--DAP 294 AR A + REVFA+PG I + S G H LI+ GA LV ++++ L +H P Sbjct: 243 ARLAADFSREVFAVPGSINSHRSHGTHALIRAGATLVETHRDVIQELHHMVHTEPLDPLT 302 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + +++++ ++ + +D + E+ + + LL+LEL G + + Sbjct: 303 KPRGKNENKKELTRVELAIVTILEPYPLHIDKIVEKTDLDIASISAALLDLELKGMVRQL 362 Query: 355 PGGYVRLRRA 364 PG ++ Sbjct: 363 PGKLFSIKEE 372 >UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B2A332_NATTJ Length = 349 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 121/357 (33%), Positives = 192/357 (53%), Gaps = 17/357 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFL-SFPRKSIESSL 64 L I L + + ++ W + L+ +G++ A+ + + ++ + Sbjct: 3 LKLIPGLGNNRIKKLIQWFGCGEEVWNSSIENLLEVSGISYDLAENIVVHRSKIDLQKKV 62 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + + +I E YP L D P L+ +G++ L++ +LAVVG+R + YG+ Sbjct: 63 NEIMEQGIKIILP--EEYPESLQEIYDSPVLLYAKGDVSLLNTRKLAVVGTRKITSYGDI 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + ++ +TI SGLA+G D AH LQ G +IAVLGNGL+ I+P + L Sbjct: 121 VIKNIIPSVTRADITIVSGLAKGTDAKAHYRCLQEGGKTIAVLGNGLDIIYPPENRELYK 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + E+ G L+SE+P ++ P ++FP+RNRIISGLS+GVLV+EA +SG+++TA+ AL+Q Sbjct: 181 QISEK-GLLISEYPPELGPQKFHFPQRNRIISGLSEGVLVIEAPKKSGAMITAQLALDQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G + LI QGA +VT+P++IL ++ L + +N S Sbjct: 240 REVFAIPGNINNPCSQGCNALIAQGAKVVTDPDDILTEYNLTVNMLIEESKNRLSSS--- 296 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + +D + ++ T LLELEL GWI GGYV Sbjct: 297 -----QKAILEKIPYYEISIDELLSSTNTD-KDIYTCLLELELNGWIMRRLGGYVIR 347 >UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYJ2_DESAS Length = 748 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 167/369 (45%), Gaps = 10/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSF 55 M+ E W+ L + + ++ I + G+ + ++ S Sbjct: 381 MMMEEYWIWLSQVKGIGPILQKKLLEKFGSPESIYLASGMELMTIAGINNKTVEKIQASR 440 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + L E+ N L+ YP Q+ + P + G L +S + +VG+ Sbjct: 441 SLEQARQILNRTEKQNIRLLTYHDYLYPVQVKGFSKAPVLFYYRGNLR-PNSTGVGIVGA 499 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG++ + LA + + + SG+A+GID AH A L+ G +IA+LG G++ + Sbjct: 500 RRCTDYGKQVTKEAATFLAKQDIPVISGMAKGIDSYAHTACLKAGGFTIAILGCGVDVCY 559 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H L + E+ G L+SE+P A +FP+RN I+ S +L+VEA +SG+L+ Sbjct: 560 PAEHRGLMDRIAEE-GVLLSEYPPQTRVRAEHFPQRNTWIAAWSNKLLIVEAGEKSGALI 618 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ A +Q R+V A+PG I + S G + LI +GA + P ++L + H Sbjct: 619 TAQLAEKQNRQVLAVPGQIYSQESIGCNQLIHKGAKIYLHPNQLLLDSGQKKHEQRINSN 678 Query: 296 NSFYSP---DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ E+ ++ V+ +A G ++ L +EL G I Sbjct: 679 EAHRNKRVNEIPPLSQIEKEIYDHLSPIPQSVEQLAGILGSNPSALLRILCVMELEGKIE 738 Query: 353 AVPGGYVRL 361 GG R Sbjct: 739 LFAGGMARR 747 >UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6FE49_9GAMM Length = 368 Score = 356 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 158/364 (43%), Positives = 222/364 (60%), Gaps = 7/364 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSI 60 + WL L + + G +++ + + + L GL Q Q L+ +SI Sbjct: 6 DKYWLALYDVPKIGGSRALKLLQK-TSLTKLFSGSTRYLHSLGLDTAQQQAVLNPDWQSI 64 Query: 61 ESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + +L WL ++ LIP + YP L P L+VEG + L Q+A+VG+RA S Sbjct: 65 DRNLQWLAAEDNRYLIPITASDYPITLKNIAAPPLLLYVEGNVELLSKPQIAMVGTRAPS 124 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 +YG+R F L +G+ ITSGLA G+D H++ L G +IAVLG GL ++P+RH Sbjct: 125 YYGKRHAHSFAAELVQQGLVITSGLAIGVDSECHRSVLAAKGETIAVLGTGLANVYPKRH 184 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +LA + E+ GALVSEF +FPRRNRI+SGLS GV+VVEAAL SGSL++AR Sbjct: 185 LKLAQQIREK-GALVSEFSPFTQARPEHFPRRNRIVSGLSLGVVVVEAALNSGSLISARY 243 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREVFALPG I NP + G H+LI+QGA L+T+ +I + L + + + + + Sbjct: 244 ALEQGREVFALPGAIDNPAAAGCHYLIQQGAKLITQTSDITDELTYI-NVRTNFEQTDLF 302 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + D + V+LP +L NVG EVT D++AER+ QPV +V+T L+ELEL W+ AVPGGYV Sbjct: 303 NSDLETVSLPNQTILDNVGYEVTTADLIAERSQQPVSQVLTSLMELELDNWVNAVPGGYV 362 Query: 360 RLRR 363 R +R Sbjct: 363 RSQR 366 >UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella RepID=A4IYW5_FRATW Length = 368 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 122/361 (33%), Positives = 187/361 (51%), Gaps = 6/361 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC- 65 + L V+ + I + + + ++ L Sbjct: 9 LIILSITPYFGNTRFVKAKENNFDFNEIINSPSKYIKTLSLRQESIDFLNQRKYLEYLDK 68 Query: 66 ---WLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 WL+ + +I YP L ++ P L+ G L+S QLA+VG+R HS Y Sbjct: 69 VSKWLDSSGKNQIITYLDNRYPSDLKQISNPPLILYCSGNSDLLNSQQLAIVGARNHSSY 128 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G+ C L +TI SGLA GID +AHK A+ N +IAV+G G++ ++P + Sbjct: 129 GKNVTAKLCADLKDSKLTIISGLAYGIDTLAHKYAIDNNLSTIAVVGTGVDVVYPSSNRE 188 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ G ++SEFPL PL YNFP+RNRIISGLSKGV++VEAA +SGSL+TA AL Sbjct: 189 LYNKIINTNGLIISEFPLGTGPLRYNFPQRNRIISGLSKGVVMVEAASKSGSLITAELAL 248 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQ +EVFA+PG I + S+G + LIKQGA LV +ILE + + + ++ + Sbjct: 249 EQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVCNVNDILEEIDIASNTSQTSSTDNQVNK 308 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +L ++ E+T +D + ++ P +V + L ELEL I ++PGGY+ + Sbjct: 309 -IISLNKSERIILGSIDRELTTIDKIIIKSKLPYNQVTSILFELELKSLIESIPGGYINI 367 Query: 362 R 362 + Sbjct: 368 Q 368 >UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVJ2_9ENTR Length = 376 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 165/361 (45%), Positives = 229/361 (63%), Gaps = 5/361 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIWLR+ +S L + I + + +++ L+ GL+ Q +F K+I Sbjct: 20 MDPMEIWLRMRMVSHLSTVKITAIVEKLIEINNVKVASLRACGLSPHQCVQFTHANSKAI 79 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +++ WL+ H LI YP L P LFV G+ AL S Q+A+VGSR + + Sbjct: 80 YAAMKWLDVSEHKLITLSDPNYPYLLKQIYSPPIILFVAGKEKALSSTQIAMVGSRYNDF 139 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+W ++F + L TITSGLA GIDG++HK AL+ NG+++AVLG+GLN ++P +H Sbjct: 140 YGEKWAQIFSQELVMHKFTITSGLAIGIDGISHKTALRNNGITLAVLGSGLNKLYPTQHT 199 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSE+ D PPLA NFPRRNRIISGLSK V+V+ A L+SGSL+TA+CA Sbjct: 200 SLANKIKEK-GALVSEYLPDTPPLAKNFPRRNRIISGLSKAVIVIAAGLKSGSLITAKCA 258 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQG+++FALPG +GN EG HWLI+QGA L + P++I+E+L GL WLP + Sbjct: 259 LEQGKDIFALPGALGNSLYEGNHWLIQQGAYLASSPQDIIEHLNSGLKWLP----ENKIL 314 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 D + +L + E TP+D++AER+G V EV QLLE EL G + V GGY+R Sbjct: 315 SDNLHIDNSMNNILRYINFEPTPIDLIAERSGLSVIEVSAQLLEFELMGKVIFVSGGYIR 374 Query: 361 L 361 + Sbjct: 375 V 375 >UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria RepID=Q31J83_THICR Length = 377 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 140/373 (37%), Positives = 197/373 (52%), Gaps = 15/373 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTGL-TLRQAQRFLSFPR 57 + WL L + + +I + S Q + L +Q +R Sbjct: 5 DNLHDWLLLHFA-RVNAKQLPQITSYFGSISQAMAASQASWQSSQLLKPKQLERLFDPDN 63 Query: 58 KSIESS-LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + S + W +QP ++ + YP L +D P L+V G++ L QLA+VGSR Sbjct: 64 DVLVSEAVAWSQQPEQTILTLEDAVYPELLKRISDPPILLYVRGDVSLLSEPQLAIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIAVLG 168 S G F + LA+ G+TITSGLA GID AH+ ALQ G ++AV+ Sbjct: 124 NASKQGRLTAMDFAQYLASVGLTITSGLASGIDKAAHEGALQAGASNSKTAQGTTLAVVA 183 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 GL+ ++P + LA + ++ GALVSE+PL P+A+ FP+RNRIISGLS G LVVEAA Sbjct: 184 TGLDRVYPAANRELARQIADR-GALVSEYPLGTKPMAHFFPQRNRIISGLSVGTLVVEAA 242 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 L+SGSL+TAR ALEQ REVFA+PG I NP ++G H LI+QGA LV ++ILE L L Sbjct: 243 LKSGSLITARTALEQDREVFAVPGSINNPQAKGCHQLIRQGAKLVESGQDILEELSVILQ 302 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + P S + +LL + E +D + + PV ++ +QL+ LEL Sbjct: 303 LSLNEPSKGQGSSPTKKDKEAPGDLLRYIEFEPIGLDELVVLSKLPVSDIQSQLMMLELE 362 Query: 349 GWIAAVPGGYVRL 361 G I A+ G R Sbjct: 363 GRIEALSAGRWRR 375 >UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia RepID=C7GBX1_9FIRM Length = 361 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 100/367 (27%), Positives = 183/367 (49%), Gaps = 12/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M++ W L +I + R+ + + +Q G+ + A + Sbjct: 1 MINYAYW--LSNIPGIGIRTRNRLIGAAGSAREVYGLTEKQLLLIPGVEEKHAAGIMESK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGS 115 ++ ++ + + + + + +P +L A D P +L+V+G + ++ +A+VG+ Sbjct: 59 KRDYDTEYESMAEREIFFLSREEQLFPQRLAAIPDAPYSLYVKGTIPQEWNNKTVAIVGA 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA + SG+A G+DG H AL+ NG + AVLG G++ + Sbjct: 119 RRCSAYGRSVAEKIAGRLAASDAWVVSGMASGVDGSGHTGALRKNGYTCAVLGCGVDICY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ ++R+ +LE+ GA++SE+P P A FP RNRII+GL+ V++VEA ++SGSL+ Sbjct: 179 PKSNSRIYQEILEKNGAIISEYPPGTNPSAPLFPARNRIIAGLADVVVIVEAKIKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG++++A+PG + + SEG + LI+QGA ++++ +E L+ L+ Sbjct: 239 TADYALEQGKDIYAVPGRMYDALSEGCNNLIRQGAGIISDVDEFLKELELQGEINTGEDN 298 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ + + + V + ++ G VPE++ L L G+I Sbjct: 299 LKNLLLEKD-----ERLVYSCLSLRPKNVGELLQKTGMSVPEMMDILARLLQKGFITETV 353 Query: 356 GGYVRLR 362 Y + Sbjct: 354 KNYYIRK 360 >UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXR7_9CLOT Length = 364 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 10/364 (2%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK--- 58 W+ L ++ ++ +I ++ G+ + A + + Sbjct: 4 YWIWLSETPNIGDVIGKKLLEEFKTPKNIFDADKEELMNVEGIGEKTANLIFNSKYEVMN 63 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E+ + E+ N L+ + YPP++ D P L+ G + + +VGSR Sbjct: 64 RSETIMKKCEKNNIKLLNINDSSYPPKVKNIQDSPILLYYLGTIT-KDCMGVGIVGSRRC 122 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG++ + E LA +++ SG+A+GIDG +H A + G +IA LG G++ ++P+ Sbjct: 123 TSYGKKIAKEAAEFLAENNISVISGMAKGIDGYSHTACINSGGYTIAFLGGGVDKVYPKE 182 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H +L ++ + GA++SE+P P NFP+RNR+IS S +LVVEA SGSL+TA+ Sbjct: 183 HIKLMEEIIAK-GAVISEYPPGTKPYPKNFPKRNRLISAFSNKLLVVEAGEDSGSLITAQ 241 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A + REVFA+P I + S G + LI GA L +++L++ + ++ Sbjct: 242 FAKKYNREVFAVPNNIFSKESRGCNKLILNGATLYIFQQQLLDSYS-NITSKNKYCISNV 300 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + V +L + E ++ + +V+ +L +EL G I A G + Sbjct: 301 QVKNNLKVDYIEKIILNAINKEPKTIEQLQVIVNDDKVDVLEKLSLMELDGKIKAFQGKF 360 Query: 359 VRLR 362 L Sbjct: 361 YSLA 364 >UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteria RepID=B0C0E4_ACAM1 Length = 376 Score = 353 bits (905), Expect = 8e-96, Method: Composition-based stats. Identities = 105/374 (28%), Positives = 169/374 (45%), Gaps = 15/374 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + WL I + + R+ S + G + + + Sbjct: 1 MEERPYWLAWSLIPGIGPVVLKRLQQRFGTLSSAWSADSGTLGAVTGIGAQTLKTIQKHR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL----HALHSFQLA 111 + + L Q N + YP L D P L+ G++ + + + Sbjct: 61 QSTNPTDLLAQHIQKNPSFWCMADQAYPRMLTEIADSPPLLYYRGQVQLSENQGSTPMVG 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R S Y +RW R LA RG+T+ SG+A GID AH ++ G +IAVLG G+ Sbjct: 121 IVGTRDPSEYAKRWTRKIAYALAKRGITVVSGMAEGIDTQAHLGCIEGGGRTIAVLGTGV 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P R+ L + EQ G L+SE+P P +FPRRNRI++GL + +LV+EA +S Sbjct: 181 DMIYPPRNQGLYQKI-EQQGLLLSEYPSGTQPNRAHFPRRNRIVAGLCRALLVMEAPTKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+L+TA A E R+++ LPG + NP + G L+++GA L+ ++L+ L Sbjct: 240 GALITAYQANEYNRDIYVLPGSLDNPRAMGCLGLVQRGAQLILGIGQLLDQLGAMPPLSS 299 Query: 292 DAPENSFYSPDQQDVALPFP-----ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + P +L GD P D++ + EV ++L+LE Sbjct: 300 APAPSISEIPSTLPSVQAEILKTVSQLCQQSGDGSVPFDLIVQSVELSAGEVSGEILQLE 359 Query: 347 LAGWIAAVPGGYVR 360 L G + +PG Sbjct: 360 LQGLVNQLPGMRYA 373 >UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6U9_ACIC5 Length = 401 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 126/379 (33%), Positives = 180/379 (47%), Gaps = 15/379 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG---LTLRQAQRFLS-FPRK 58 D W+ L + +++ + + L Q L AQ + Sbjct: 21 DRLAWVALALTPGMGPRRILQAVEAAGSAQALLDLPLTQLESLRLPAEAAQFLHDGRALR 80 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + + ++ E YP +L D P L+V G+ L +AVVG+R Sbjct: 81 AAQQEAERVAAAGAQIVTCIDEAYPERLREIYDAPPILWVRGDASLLKRPSIAVVGTRHP 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + LA G+ I SG+ARGID AHK AL ++A+ G G++ I+P+ Sbjct: 141 TPYGAGMAEMLSRDLAANGLLILSGMARGIDTAAHKGALAAKKPTLAIWGTGVDVIYPKE 200 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA ++ GGA+VSE PL P NFP+RNRI+SG+S GVLVVE SG+ VTAR Sbjct: 201 NKALAEQIVATGGAIVSELPLGTFPAPQNFPKRNRILSGISFGVLVVEGGEFSGTRVTAR 260 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 CALEQ REVFA+PG + N + GP+ LIKQGA L E++ E+L + A Sbjct: 261 CALEQSREVFAVPGNVTNKQAWGPNTLIKQGAKLTATWEDVWEDLPTDVRVAVTADAVVA 320 Query: 299 YSP-------DQQDVALPFPELLANVG-DEVTPVDVVAERA--GQPVPEVVTQLLELELA 348 D A LL + DE ++ + ++ E+ T L ELELA Sbjct: 321 SPEPVTASLFDDNTAAPVEAALLRILRHDEALQMEEILQKLEGELSSSEIFTALFELELA 380 Query: 349 GWIAAVPG-GYVRLRRACH 366 G I +PG YV+ A Sbjct: 381 GRIRQLPGKNYVKSFPAAR 399 >UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteobacteria RepID=Q15ZY0_PSEA6 Length = 379 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 159/363 (43%), Positives = 215/363 (59%), Gaps = 6/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAH----WVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 + WL L + + I VA + + L G T Q Q+ + Sbjct: 16 EQRQWLILAQLPRFSVAKLATILRKNAIQVADLFNANPKQLAAYGFTDGQIQQLQHPNER 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ SL W EQ + L+ S+ YP LL T P L+ G L++ Q+A+VGSR Sbjct: 76 RLDKSLQWSEQTSSSLLNITSKHYPKVLLQTARPPILLYCLGNKDLLNTHQIAIVGSRNP 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G++ + F + L+ G T+TSGLA GIDG+AH L+V G ++AVLG GLN I+P+R Sbjct: 136 SIAGKQNAQYFAQGLSQCGWTVTSGLALGIDGLAHDGVLKVQGNTVAVLGTGLNNIYPKR 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H ++A S+LEQGGALVSEF ++P NFPRRNRIISG+S G L++EAA++SGSL+TAR Sbjct: 196 HVKMADSILEQGGALVSEFVPEMPAKPENFPRRNRIISGMSLGTLIIEAAIKSGSLITAR 255 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQ R+VFA+PG I N S+G H+LIKQGA LV +I + Q L Sbjct: 256 YALEQNRDVFAVPGNINNVLSKGCHYLIKQGAKLVECVGDINDEYQHLA--LNFLNIQQS 313 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +L +LL +V E TP+D+V ER G PV EV++QLLE EL G +AAVPGGY Sbjct: 314 ELQKSARQSLASDKLLDSVDFETTPLDIVVERCGMPVAEVMSQLLEYELRGLVAAVPGGY 373 Query: 359 VRL 361 ++L Sbjct: 374 LKL 376 >UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC300C Length = 360 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 165/365 (45%), Gaps = 12/365 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP- 56 +D + W + ++ + + + + + + ++ LT + R +S Sbjct: 1 MDRKYWYWINNLEGIGNVKIRTLLS-LGTPEELYNMERKEFECLPVLTGKDIDRIVSKDI 59 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R++I + N + D E YP +L D P L+ +G L +A+VGSR Sbjct: 60 RQNIFEKYQKDMENNVRFVFPDEEDYPCRLKELYDKPYILYYKGRLPRNDVRSVAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R L+ G I SGLA GID AHK AL G + VL G+ +P Sbjct: 120 RCSEYGRYAAREIAGILSEAGACIISGLAAGIDSEAHKGALYKGGYTCGVLAGGVEKCYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + +GG ++SE+P + FP RNRIISGLS V+VVEA RSGSL+T Sbjct: 180 AGNFNLYMDIQNRGG-IISEYPGESITTPGMFPLRNRIISGLSDYVIVVEAGFRSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R V+A+PG I + S+G + LI GA++VT+ E + L + +N Sbjct: 239 AGTALEQNRTVYAVPGRITDVSSKGCNRLIADGAMVVTDFESLPGELGLSIPNYEKNIKN 298 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + + ++ + +G EV+ L LE+ G I + Sbjct: 299 DIVLARDEKM-----LYSLLLDFTPKSLETLVNDSGMSPAEVLRSLTCLEIKGIIREISK 353 Query: 357 GYVRL 361 + Sbjct: 354 NFYVR 358 >UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFB1_BREBN Length = 356 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 180/357 (50%), Gaps = 7/357 (1%) Query: 12 SISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS-IESSLCWL 67 IS L + I + ++ GLT + ++ + L Sbjct: 1 MISGLGRKKIREIFEITGSFQIAIENWHELARELGLTSLITGQVDQQSNEAPAMALLEKR 60 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E+ + + YP L D+P LF G+ L + VVGSR + YG Sbjct: 61 EEEGTRFLCPFDDAYPASLRNIPDFPWTLFYRGDHTLLDKLSIGVVGSRKPTPYGRASCS 120 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L G+ I SG+A GID AH+A L+V G +I VLG G+ ++P RH L + Sbjct: 121 FFVRELVQAGLVIVSGVAYGIDAEAHQATLKVGGKTIGVLGCGMKHVYPSRHRELYRQI- 179 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 E G L+SE+P +PP++ FP RNRIISGLS GVLVVEAA +SGSL+TA CALEQG+EV Sbjct: 180 ESFGLLLSEYPPHIPPISGLFPERNRIISGLSIGVLVVEAAEKSGSLITADCALEQGKEV 239 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE-NSFYSPDQQDV 306 FA+PGPI + S GPH LIKQGA LVT +I + ++ L + + D + Sbjct: 240 FAIPGPIFSLMSAGPHNLIKQGAKLVTCSNDIWDEIKHHLPEAKQMQQVKKSNATDVIPL 299 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL-LELELAGWIAAVPGGYVRLR 362 + ++ V + +D + + +++ QL + LE G I A+PGGY R Sbjct: 300 SNEEKAIVEAVTYDGIHLDELMSCLEKDQRKMLHQLVIRLEAKGAILALPGGYFARR 356 >UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQ31_9SYNE Length = 411 Score = 351 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 113/409 (27%), Positives = 179/409 (43%), Gaps = 50/409 (12%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FPR 57 + WL + + + R+ + G+ L A+R +S + Sbjct: 4 ERAYWLAWSQVKHVGPVTIKRLWEHFGTLELAWQATASELLKVDGIGLLSAERIVSVRSK 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHALHSFQLAVVGS 115 + E L E+ N YP L A D P L+ G L L+ + +VG+ Sbjct: 64 LNPEQLLVEHEKKNKAFWTPVDADYPALLFAINDPPPVLYYRGSLRLSDLNRLTVGIVGT 123 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+RW + + L+ +G I SGLA GID AH L G+++AV+G G++ ++ Sbjct: 124 RRPSTYGKRWTQRLSQRLSQQGAVIISGLAAGIDTEAHTGCLYQQGLTVAVVGTGVDIVY 183 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ L ++E G +VSE+P P +FP+RNRII+GLS+ +LV EA RSG+L+ Sbjct: 184 PARNQSLYQQVVE-NGLVVSEYPDGTGPDRTHFPQRNRIIAGLSRAILVTEAPARSGALI 242 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GREV+ALP +GN EG LI +GA ++ + +++ L+ A Sbjct: 243 TARLANDYGREVYALPSALGNEQGEGCLRLIAEGAQIILGEQVLMDTLEKLPAVDSSAVP 302 Query: 296 NSFYSPDQQ------------------------------------------DVALPFPEL 313 N S ++ + Sbjct: 303 NRTVSSQSDLLKKTTSEKVSSKRDIDTKAVGNLETSEALEINSTDLKKAISELTPVLANV 362 Query: 314 LANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 L V E T VD + ++ V++ L +LEL+G + +PG + Sbjct: 363 LEAVAIEPTIVDYIVQQTQMETGIVLSALFQLELSGMVIQLPGMQYQRA 411 >UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex degensii KC4 RepID=C9RBU2_AMMDK Length = 375 Score = 351 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 170/368 (46%), Gaps = 13/368 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFL-SFPRK 58 + +L + + + + + + R A+ + Sbjct: 5 EERPYYLAWQLLLPGQSRRVKGLISFFGSAREAFLASPRHWASVVGERLAEALAGRKAKL 64 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ L + + YP L P ALF GE+ +A+VG+R Sbjct: 65 DLKKEEERLRKSGVRYVTLAEPEYPALLREIDSPPAALFYLGEIR-QEERAVAIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG LA GVT+ SGLARGID AH+ AL G ++AVLG G + +PR Sbjct: 124 TRYGREVAESLASDLARFGVTVVSGLARGIDAAAHRGALSGGGRTLAVLGTGCDRCYPRE 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ GALVSEFPL ++FP RNRII+GL V+VVEA +SG+L+TA Sbjct: 184 NWNLWREI-ERKGALVSEFPLGTEARPWHFPVRNRIIAGLVHAVIVVEAPEKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALE GREV A+PG + P ++G H L+KQGA LV + E++LE L + + + + + Sbjct: 243 LALEYGREVLAVPGRVTTPQAKGSHLLLKQGAYLVEKAEDVLEVLGWEIIGAEEEKDLAL 302 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 E+++ + ++ + ER PV ++ L LEL G + GG Sbjct: 303 --------NPEEEEIVSLLAAGFLSLEELVERGKMPVDACLSLLSMLELKGVVRPGGGGT 354 Query: 359 VRLRRACH 366 L R Sbjct: 355 YLLTRQGE 362 >UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYP6_SYNWW Length = 362 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 130/361 (36%), Positives = 190/361 (52%), Gaps = 8/361 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH-IDAVVLQQTGL-TLRQAQRFLSFPRKS 59 + L +I + + +I + + + + L AQ +S + S Sbjct: 4 TEKAALCFLHAIKGIGSKSLWKIKDSFGSFENCLKSDSSRLYALLKSEIAQAIISQRQNS 63 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 I L LE + + + YP L + P L+ +G + + LAVVGSRA Sbjct: 64 SIFFYLERLENEGINPMGFEESAYPSSLRNIYNPPMLLYFQGNMDCVKKICLAVVGSRAA 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG R LATRG+++ SG+ARGID AH+ L G +IAVLG+GLN I+PR Sbjct: 124 SDYGRTTARKLGHQLATRGISVVSGMARGIDTEAHRGTLDARGKTIAVLGSGLNIIYPRS 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + RL ++EQ G ++SEFPLD P NFP RNRIISG+S+GV+VVEA ++SG+L+TA Sbjct: 184 NKRLFHEIIEQ-GVVISEFPLDTNPEPGNFPMRNRIISGISRGVVVVEARVKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGR+VFA+PGPI S G + LIKQGA L+T E+I+E + + + Sbjct: 243 YALEQGRDVFAVPGPINRESSMGANNLIKQGAKLITGVEDIIEEY----YDITIPEKELP 298 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + ++ + + D + G + E+ LL+LELAG + ++PG Y Sbjct: 299 LQEQLLFLDEQEKVVVNCLAGDPLLFDDIIASTGFNIGELSRLLLKLELAGIVKSLPGNY 358 Query: 359 V 359 Sbjct: 359 Y 359 >UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVN1_9FIRM Length = 373 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 111/373 (29%), Positives = 176/373 (47%), Gaps = 12/373 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQR-FLSFP 56 M + + W +I+ + ++ S I + LT Q + S Sbjct: 1 MTNNDFYWYWFTNIAGIGVKTQKKLLEHFGHPSTIYNAPESEIKGILTTGQCKEVIASKN 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K IE+S+ LE+ + +S+ YP +L + P L+ G L LA+VG+R Sbjct: 61 QKKIEASIRKLEKREIYFFHRESQEYPERLAQLYEPPNLLYYIGRLPNFSKPILAIVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + R F + LA G+ I SG+A G+D HK AL NG ++ VLG G++TI+P Sbjct: 121 RATIYGRKMAREFAKRLAECGIQIVSGMAAGVDAAGHKGALDANGYTLGVLGGGIDTIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + + GG ++SE+ + + P FP RNRIISGLS G+ V EA RSGSL+T Sbjct: 181 VENFNLYQQVYQMGG-VLSEYNMGISPQKGLFPMRNRIISGLSDGIFVTEAGARSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A LEQG+++FALPG I + S G + LI QGA+LV PE+I++ + Sbjct: 240 ADQGLEQGKDIFALPGRITDCMSRGCNDLISQGAVLVRSPEDIMDIIIKEGKTGNKKKNM 299 Query: 297 SFYSPDQQD------VALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ + + + + + E +G E+ L++ EL Sbjct: 300 DVNREKFFKEQKFFCENKKEEKVYSLLDEIHPMTFENLLENSGFSAFELQHILMKFELKN 359 Query: 350 WIAAVPGGYVRLR 362 I + + Sbjct: 360 IIYQIEQNVYLRK 372 >UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67PC8_SYMTH Length = 386 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 105/370 (28%), Positives = 163/370 (44%), Gaps = 16/370 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M +WL + M ++ + + G + L+ Sbjct: 22 MEGALVWLIYQRAPGVGRRRMAQLMRTYPDPEVAWRLGKAELAAVRGFRPDIVEALLAVR 81 Query: 57 R-----KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + + E L + ++ + YP +L P L+ G +A Sbjct: 82 KSAEARRDAERELERARRAGLRVLCYGTRGYPERLAEIPVPPPVLYQYGPWEPDGRPVVA 141 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + YG LA G + SG+ARGID AH+ AL+ G S+AVLG G Sbjct: 142 IVGTRRPTAYGLAVAEQLGRELAQLGAVVVSGMARGIDTEAHRGALEAGGTSVAVLGGGA 201 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P+ A L + E GA++SE P P NFP RNRII+GLS GV++VEA RS Sbjct: 202 DVCYPQESAALYRQMRET-GAILSEQPPGTAPRPENFPERNRIITGLSHGVILVEAGERS 260 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+L+TA A+EQ R++F +PGP+ +P S G + ++ GA L ++LE+L F Sbjct: 261 GTLITAAHAIEQDRDLFVVPGPVTSPLSRGLYKYVRDGAGLAVSAAQVLEDLGFLPSA-- 318 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + +L +G +AE +G P+PEV L LE+ + Sbjct: 319 ----EGPLHFTPRGLTELEQRVLGWMGSAPWWPGDLAESSGLPLPEVQACLTMLEIRSAV 374 Query: 352 AAVPGGYVRL 361 +P G Sbjct: 375 RRLPDGQYIR 384 >UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKQ7_9GAMM Length = 377 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 128/362 (35%), Positives = 195/362 (53%), Gaps = 7/362 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSI 60 WL L++ L ++ + A + G+ L + + Sbjct: 11 QRAWLELINTPGLGHQRLLHLVEAFGGPGAALAASPSEWRHHGVELNIDPAARTAAADAD 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ L E+ HL+ D YPP L D P L++ G+ LH Q+A++G+R + Sbjct: 71 QAWLDQDERH--HLLCRDDPDYPPLLAEIPDPPPVLYLNGDPSLLHRPQIAIIGARECTP 128 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNTIHPRRH 179 GER F LA GV +TSGLARGIDGVAH+ AL G +IAV+ G + I+P +H Sbjct: 129 QGERLAGEFARELAGAGVVVTSGLARGIDGVAHEGALAAPGGRTIAVVATGPDRIYPAQH 188 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 RLA + + G +VS +P PLA NFP+RNR+ISG++ G +VVEAAL+SGSL+TAR Sbjct: 189 RRLAHRIADH-GLVVSLWPTGTRPLARNFPQRNRVISGMALGTVVVEAALKSGSLITARL 247 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A EQGR+V+A+PG + +P S G H LI+ GA LV +E+LE+L L P ++ Sbjct: 248 AAEQGRQVYAVPGSVLSPVSRGCHRLIRDGAQLVESADEVLEDLADWLGVAPGETASTPP 307 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 P ++ + +L +G + P++ + +R + + + L+ LEL G +AA+ G Sbjct: 308 EPAREPLDPEQERVLNAMGFDPIPLETLRDRTKLTIERLSSMLVLLELNGRVAALDHGRY 367 Query: 360 RL 361 + Sbjct: 368 QR 369 >UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQW9_HAHCH Length = 389 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 150/382 (39%), Positives = 200/382 (52%), Gaps = 26/382 (6%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR--------- 57 WL L +I SL + +A + S ID L + ++ + + + Sbjct: 9 WLNLTTIPSLGDSRLALLAQHFEESSQIDDFQLGVSSSLSFSSELWRAIEKVIAHGDRPV 68 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++L W EQP + L YP L D P L+ G +H Q+A+VGSR Sbjct: 69 NAQAANALRWSEQPGNRLFLLPDADYPSLLRLLPDPPAVLYARGRHELIHQPQIAMVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S +G+ R F +L G TITSGLA GIDG AH AL G +I VLG+GLN I+P Sbjct: 129 NPSVHGQETARQFARSLGESGFTITSGLAAGIDGSAHAGALGTLGATIGVLGSGLNVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H LA ++E G LVSEFP D P + +FP+RNRIISGLS G LVVEA+LRSGSL+T Sbjct: 189 AKHRDLAQKMMES-GLLVSEFPPDTQPRSQHFPKRNRIISGLSLGTLVVEASLRSGSLIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ REVFA+PG I NP + G H LIKQGA LV ++IL L + E Sbjct: 248 ARNALEQHREVFAIPGSIHNPQARGCHHLIKQGAKLVECTDDILAELPALMGLYRSLNEP 307 Query: 297 ---------------SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ +L +G + TP D + ER G + E+ + Sbjct: 308 WTTVFAAEEFPGQQSQPEPASLRPLSEQAEAVLKGMGYDCTPPDALVERTGLSIAEIRSV 367 Query: 342 LLELELAGWIAAVPGGYVRLRR 363 L+ELEL GW+ V GG++R R Sbjct: 368 LIELELEGWVQEVAGGFIRNAR 389 >UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETK3_AMOA5 Length = 374 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 104/373 (27%), Positives = 171/373 (45%), Gaps = 14/373 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQRFL 53 M + E L L I + + RI I G+ L Q L Sbjct: 1 MHEQEKIYQLALSLIKGIGFNTWKRIIEKFKTAQAIFQASKTSLTGNLPGIPLSIIQAIL 60 Query: 54 SFP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + E + ++ ++ E YP +L LF +G ++ S +++ Sbjct: 61 AKDTLSIAEKLVGAHQKNGIQVLSFFDESYPLRLKHIATPSSFLFCQGNMNFSMSKVISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VG+R + YG+ + F L + + SGLA GID AHK L+ ++ VL GL Sbjct: 121 VGTRKATPYGKSFVEKFIAGLREYEEILVVSGLAYGIDLQAHKMCLRYGLSTVGVLAGGL 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P H ++A +L GG LVSE P+ + FP+RNRII+GL+ +VVEA +S Sbjct: 181 DKIYPTAHKKVALDMLADGG-LVSEIPIGSTLETFQFPQRNRIIAGLADATVVVEADYKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 G+++TA A REVFA+PG I S G + LIK Q A L+T +++ + + Sbjct: 240 GAIITANFANAYNREVFAVPGNIDATYSAGCNHLIKTQQAHLLTSTDDLAYIMNWQKCSQ 299 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG--DEVTPVDVVAERAGQPVPEVVTQLLELELA 348 P+ NS ++ E++ + + +D ++++ +V + LL+LEL Sbjct: 300 PNNLINSHKEK-LVGLSQVEQEIVQVLKLLQKEAYIDEISQQIQLSPSQVSSMLLQLELK 358 Query: 349 GWIAAVPGGYVRL 361 + +PG +L Sbjct: 359 NIVECLPGNKFKL 371 >UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 Length = 371 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 162/371 (43%), Positives = 206/371 (55%), Gaps = 9/371 (2%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFP 56 M D + WL L L + + GL Q + Sbjct: 1 MKDQDLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQWLACGLKPEQLVFLTTQA 60 Query: 57 RKSIESSLCWLEQPNHHLI-PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K E L W N+ I YP L P LF+EG A+H +A+VGS Sbjct: 61 AKQAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S G + R F LA G+ +TSGLA GIDG AH ALQ G ++AVLG+GL ++ Sbjct: 121 RNASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P++H LA ++ Q GALVSEF PP A +FPRRNRIISGLS GV+VVEAA +SGSL+ Sbjct: 181 PKQHQGLAERIIAQ-GALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---PD 292 TAR A EQGREVF +PG I N S+G + LI+QGA LV ++I + L+ L W Sbjct: 240 TARYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQV 299 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + +S Q D LPFPELLANVG E TP+D++A R PV +++ QLLELEL G + Sbjct: 300 PYQATLFSAVQSDEELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVV 359 Query: 353 AVPGGYVRLRR 363 AVPGGY+R R Sbjct: 360 AVPGGYIRKGR 370 >UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH4_9CLOT Length = 396 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 120/396 (30%), Positives = 172/396 (43%), Gaps = 33/396 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M W+ L + RI + L + + Sbjct: 1 MNRELFWIWLSLGLTPGSRSCKRILERFRTPEEFFRAPDDQWRSFRLPAGELSALSTRDL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 E + LI + YP +L + P L+ +G L L LA VG+R Sbjct: 61 VQAEKISVACREKGIDLIAPGDQAYPNRLWEIPNPPALLYCQGVLPDLEEALCLAAVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G + C LA G I SG A G D A + ALQ G +IAVLG G + +P Sbjct: 121 SATEDGMKSAFELCYRLAGAGTVIVSGGALGADQAALEGALQAKGKTIAVLGGGADVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 A + +LE GGA++SE+P P NFP RNRIISGLS+GVLV+EA SG+L+T Sbjct: 181 PNFAGMRKRILENGGAVLSEYPPATKPYRGNFPVRNRIISGLSRGVLVIEAPKHSGALIT 240 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFALPG + + S G + LIK GA VT PE+ILE + + A ++ Sbjct: 241 AGLALEQNRDVFALPGSVRSEASFGTNQLIKDGAKPVTCPEDILEEYAYTYAYSGSAKKD 300 Query: 297 SFYSPDQQDVAL-----------------------------PFPELLANVGDEVTPVDVV 327 S + + V+ +L + E +D++ Sbjct: 301 EIASTEIEGVSPSGQNPLRPPNHRTELPKAPPAIREEELSACAVKLYQAMSWEPAYLDIL 360 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 AE AG + + + ELEL+G I + G ++ Sbjct: 361 AEEAGLSAAQALQAVTELELSGIIQSYSGRRYAFQQ 396 >UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacteria RepID=C7RIS8_9PROT Length = 363 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 135/358 (37%), Positives = 185/358 (51%), Gaps = 11/358 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSI-ESS 63 WLRL + + G+ ++ I G + R A+ L ++ + + Sbjct: 10 WLRLTLVPGVGGESQRKLLKAFGLPEAIFTAGRSALGDVIGDRTARLLLDTDNRAAVDRA 69 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L W N HL+ YP LL D P L+V G L L+ LAVVGSR + G Sbjct: 70 LAWANGTNQHLVCLADPEYPQALLQIPDPPTLLYVRGRLSLLNQPALAVVGSRNPTPQGR 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 F A G+ + SGLA GID AH+ AL G +IA +G G++ I+P + +LA Sbjct: 130 GNAERFAAAFAEAGLGVVSGLALGIDAAAHRGALNATGNTIAFIGTGIDRIYPAANQQLA 189 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + + GA+ SEFPL PP A NFPRRNR+ISG+S+GVLVVEA SGSL+TAR A EQ Sbjct: 190 FDIAAR-GAIASEFPLATPPAAANFPRRNRLISGISRGVLVVEATTESGSLITARLAAEQ 248 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I +P S G H LIKQGA L +++E + + A + Sbjct: 249 GREVFAIPGSIHSPQSRGCHRLIKQGAKLAEAVADVIEEIGW-------ASAPADRPASA 301 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 A LL +G + +D + +R+G V LL LEL G +A +PGG+ + Sbjct: 302 TADAAEAGSLLLAMGFDPCSLDELTQRSGLTADAVSVILLHLELDGQVACLPGGHYQR 359 >UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2S1_9BACT Length = 380 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 115/377 (30%), Positives = 180/377 (47%), Gaps = 14/377 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M+D E + L IS + + + + ++ G+ A + F Sbjct: 1 MLDREACIVLNMISGVGYVKYTALCDEFGSPAGVFRRSARELMHVPGIGETLAVKIAEFD 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + L ++ +I E YP L D P L+V G L + +AVVGS Sbjct: 61 WEGELARELELADKAGVRVITLFDEAYPAVLRNLYDPPLCLYVRGRLPEFPEYAVAVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG R R G T+ SGLA G+D VAH ++ G ++AVLG GL IH Sbjct: 121 RRMSDYGARMTRQITAEAVAAGYTVVSGLAYGVDTVAHGMTVEQGGCTVAVLGGGLMRIH 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA ++E GGA++SEFP++ P +FPRRNRI++GL++ +V EA + SG+L+ Sbjct: 181 PQENVPLARRIVETGGAVISEFPMNFPVSRTSFPRRNRIVAGLARLTIVTEAGIGSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI-LVTEPEEILENLQFGLHWLPDAP 294 TAR AL+ GR+VFA+PG NP ++G H LIK+GA L+ ++L + G +LP Sbjct: 241 TARLALDNGRDVFAVPGHADNPQAQGCHQLIKEGAAGLIENFSDVLNAIGVGFGYLPGLA 300 Query: 295 ENSFYSPDQQDVA--------LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + D E+ + +D++AE G+ +++ L+ LE Sbjct: 301 PGGEANEDAVPYDSSSVGDLPPEAREIWKLLDGRELSLDLLAEETGRETGALLSTLMMLE 360 Query: 347 LAGWIAAVPGGYVRLRR 363 + + R Sbjct: 361 MKLLVEHGSDMVYRRIP 377 >UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KCD4_9GAMM Length = 362 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 127/364 (34%), Positives = 186/364 (51%), Gaps = 8/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQA-QRFLSFPR 57 +D WL L+ + + + ++ GL + A + Sbjct: 1 MDLIYWLLLLKAPHVGVRTFYKALKHFETPEQVFLASKSERKECGLFRQAALDYLENQDH 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +++ L W++ + H++ E YP QL +D P L++ G + L Q A+VGSR Sbjct: 61 SVVQADLDWVKSDDCHIVTLIDESYPKQLKTISDPPPLLYIRGSVECLSKTQFAIVGSRN 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G++ F + L+ G+ ITSG+A GID AH AL+V+ +IAV G GL+ I+P Sbjct: 121 PTPGGKQNAYQFSQELSRAGMIITSGMASGIDAQAHIGALEVDCPTIAVCGTGLDRIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + GALVSEF + P+A NFPRRNRIISGLS G LVVEA+++SG+++TA Sbjct: 181 KHKSLAHQI-SLKGALVSEFCIGTSPIANNFPRRNRIISGLSLGTLVVEASIKSGTMITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + A +QGREVFA+P I NP S+G H LIKQGA LV +I+E L L S Sbjct: 240 KLAADQGREVFAIPSSIHNPLSQGCHQLIKQGAKLVDTINDIIEELPIDLKSSTKPLNVS 299 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + LL + E +D + E++G + +LL LEL + G Sbjct: 300 NCTNSVDKTP---FVLLKYLSYEAMTIDKMVEKSGLSPQVITQELLLLELENRVEKASGS 356 Query: 358 YVRL 361 L Sbjct: 357 AYAL 360 >UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0N9B3_EUBSP Length = 365 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 13/365 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP-RK 58 E WL SI L + + + + + L + + K Sbjct: 9 YEYWLA--SIKPLQPKKKRMLRENLGSGRTVYYIEETKLHFQEYLNAKDVETIRKAQGDK 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 IE L++ N IP S YP +L + P AL+V+G L S A+VG+R Sbjct: 67 KIEERWARLKEENIRFIPYFSREYPEKLKHIPNPPYALYVKGSLPKEDSPSAAIVGARRC 126 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YGE+ + E LA GV + SG+ARGIDG + AL G + +LG G++ +PR Sbjct: 127 TPYGEQMALAYGEKLAKAGVQVISGMARGIDGAGQRGALNGRGRTYGILGCGVDVCYPRE 186 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L L E GG L+SE PPL FP RNRIISGLS VL++EA RSGSL+TA Sbjct: 187 HIGLYMDLQENGG-LISEQIPGQPPLPAYFPERNRIISGLSDVVLIIEAKERSGSLITAD 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V+ALPGP+ +P S+G H LIKQGA ++ PE++L L+ + Sbjct: 246 MALEQGKDVYALPGPVTSPASQGCHRLIKQGAGILLSPEDLLMELEIS-----NMNPGQN 300 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +++ + P + + +G + + E G E++ +L+ LEL G+I V Y Sbjct: 301 SDENKKMLESPENMVYSCLGLFPKSIGQLLEETGLCPKELLERLITLELEGYIKEVSKNY 360 Query: 359 VRLRR 363 R Sbjct: 361 YIRIR 365 >UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacteria RepID=D0KVS6_HALNC Length = 384 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 195/370 (52%), Gaps = 10/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPRK 58 L L++I+ + + + A + GL A + Sbjct: 13 DARRALLFLITINGMGPKRLRCLLDAFDTPQAALAAPASEWIRLGLPASLANQHPRGMAD 72 Query: 59 SIESSLCWL-EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +E+ L WL E HHL+ A + YPPQL D P ALF +G++ L QLA+VG+R Sbjct: 73 RVETMLSWLDESEQHHLVLAGEKSYPPQLADLPDAPAALFGKGDIRLLGEPQLAIVGART 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R F L+ +G+ ITSGLA GID AH+ AL +G S+AV+G G + I+PR Sbjct: 133 PTSGGINNARAFARYLSAQGLVITSGLALGIDAAAHRGALAAHGASVAVMGTGPDIIYPR 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H LAA ++ QGG L+SE+P +FPRRNR+ISGLS+GVL+VEA+L+SGSL+TA Sbjct: 193 EHQALAAEIVAQGGLLISEWPPGTTARKEHFPRRNRLISGLSEGVLIVEASLKSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------QFGLHWLP 291 R A EQGREVFA+PG I NP S GPH LI++GA LV ++I E L + Sbjct: 253 RLAAEQGREVFAIPGSIHNPLSRGPHRLIREGAKLVETAQDIFEELIDNLGARLRQTDDT 312 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E + ++L +G + D + +G EV + LL LELAG + Sbjct: 313 SLFEPESSPALAAHLDPEQQKILDCLGFDPQSADTLIASSGLTPAEVSSILLMLELAGHV 372 Query: 352 AAVPGGYVRL 361 +PGG Sbjct: 373 TTLPGGLYVR 382 >UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNG7_CLOPH Length = 369 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 6/364 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LSFPR 57 + +W + + +V + + + ++ GL + Sbjct: 6 RNRLLWYWISKNEVIGHKTIVMLLYAFHSIEGVYQAKQEELLKLGLKEEVISYLNKKYSM 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + +E+ + ++ H I + + YP +L D P L+ GEL +AV+G+R Sbjct: 66 EELENEYNYTKKRGIHFICIEDKEYPEKLKKLYDAPWFLYYRGELPKDDLPSIAVIGARN 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG F + L+ G+ I SGLARG+DG+AH AL G + V+GNGL+ +PR Sbjct: 126 CSAYGSDAAYYFSKELSLFGIQIISGLARGVDGMAHSGALSCGGKTYGVIGNGLDLCYPR 185 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + GG ++SE+P+ L Y+FP RNRII+ LS G+LVVEA +SG+L+T Sbjct: 186 ENYGLYQEVNLHGG-ILSEYPIGSKALPYHFPLRNRIIAALSDGILVVEAREKSGTLITV 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 LEQG+++FALPG + + S+G + LI+ GA LV PE+IL L+ L Sbjct: 245 DSGLEQGKDIFALPGKLTDVLSKGCNLLIQSGAKLVLSPEDILVELRNQYSSLLGVTTRE 304 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S ++ + + + + E V+ + + +++ L ELE ++ + G Sbjct: 305 INST-KEGLTEVEQLVYSFLSHEAIHVEELLMKTNLNQGQLLEVLFELESKQYVRMISGQ 363 Query: 358 YVRL 361 Sbjct: 364 QYVR 367 >UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJX5_9BACT Length = 380 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 171/371 (46%), Gaps = 15/371 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK-SIESSL 64 L + + ++ K +I ++ G+ R A+ L+ R L Sbjct: 11 LNMLPGVGPRTYNKLVKKFKKSENIFKASRKELLKCPGIGPRVAEEILNHERNYDPREEL 70 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVGSRAHSWYG 122 + +I YP L D P L++ G H L + +A+VG+R + YG Sbjct: 71 ERARLADIKIINRQDPLYPESLRNIYDAPIILYIRGNAHLLKNYDRNIAIVGTRRPTNYG 130 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + + TI SGLA GID AH A+Q+ +IA+LG G+ I+P+ + +L Sbjct: 131 LQMTEALATEASYASWTIISGLAVGIDSKAHHTAVQLKRPTIAILGGGIGKIYPKDNLKL 190 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + + GALVSE+P+ PP FP RNRII+ LS+ VLVVEA L SGSL+TA ALE Sbjct: 191 ARDICDH-GALVSEYPILFPPDRRTFPMRNRIIAALSRSVLVVEAGLNSGSLITANQALE 249 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 GR VFALPG + P S G H L+KQGAIL ++I E L + + Sbjct: 250 YGRSVFALPGRVDIPQSRGCHQLLKQGAILTESFKDIYEEFNLELGSNRKSAKKEQTEKQ 309 Query: 303 QQ-----DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + ++ + VD + E + V +V+ LL LE I +PG Sbjct: 310 ENREFDLQLDENERRIMEILKSGELHVDKICELSELNVGQVLATLLGLETHKLIRLLPGK 369 Query: 358 YVRL--RRACH 366 L RR Sbjct: 370 KYELTNRRQYE 380 >UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ81_ACIF5 Length = 365 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 186/370 (50%), Gaps = 10/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPR 57 M D WL L I+ L + LQ GL Q P Sbjct: 1 MTDR-AWLALGRIAGLGPIRQRALLERFGAVDRCFQTGAGALQGLGLQAAQIAALQKAPE 59 Query: 58 KSIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + WLE P+ L YPP L +D P L++ G+ L+ LA+VGSR Sbjct: 60 DVLTPADRRWLESPDTDLCRWTDSDYPPLLRHISDPPLLLYLRGQRACLNQAMLAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F L G+ I+SGLA GID AH+ AL ++AVLG G + I+P Sbjct: 120 SPTASGVATAEAFARNLGEAGLIISSGLALGIDAAAHRGALNSG--TVAVLGTGADLIYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +LA + G ++SE P D P + FPRRNRIISGLS GVLVVEAA SGSL+T Sbjct: 178 RSHLQLARQI-AGQGLILSEQPPDTGPRSGLFPRRNRIISGLSLGVLVVEAAEGSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A++QGREVFA+PG I +P S GPH LI+ GA LV E++L L L +A + Sbjct: 237 ARLAMDQGREVFAIPGSIHSPLSRGPHRLIRDGAKLVESAEDVLSELGPLYAVLRNA-QA 295 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + D Q + A + + + +A R G + E+ LL++EL G++AA PG Sbjct: 296 MAPAADWQPEDPAQARVWAAMDFDPLAPEQIANRCGLTLTELSAILLDMELQGYLAACPG 355 Query: 357 GYV-RLRRAC 365 G RL Sbjct: 356 GRFCRLPPVS 365 >UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N67_SOLUE Length = 391 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 125/378 (33%), Positives = 172/378 (45%), Gaps = 23/378 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLS-FPR 57 + WL L + L ++ I L+ GL+ AQ S Sbjct: 9 EEELHWLALKLVPGLGARTSGKLLDRFRTPQAIFRASRTELEAAGLSGAVAQSVASGCTF 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + Q L+ YP L D P LF G + L + L VVG+R Sbjct: 69 EDAAQQQERMFQSGAVLVTIGDPRYPRPLREIFDPPILLFARGRVDLLQTLALGVVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA G+TI SG+ARGID AHK AL G +IAVLG G++ ++P Sbjct: 129 PTPYGLAVAERLAADLAHAGLTIVSGMARGIDTAAHKGALARGGDTIAVLGCGVDVVYPM 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LAA L G +V+EFP+ NFP RNRIISGLS GVLVVE A SGS +TA Sbjct: 189 ENRKLAAD-LAVKGLIVAEFPMGAVAFPQNFPIRNRIISGLSLGVLVVEGAQYSGSAITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF------------ 285 + A++QGREVFA PG I + S GP+ LIKQGA LV + +++ L Sbjct: 248 KLAIDQGREVFACPGNITSKLSWGPNLLIKQGARLVQDWNDVVAELPPESRRQLIDRGRR 307 Query: 286 ----GLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERA-GQPVPEVV 339 D + S S ++ L + D +D + E+ E++ Sbjct: 308 RLLGDGSASLDETQASLLSDPAPELGTVSRRTLEVLQVDNSIHLDDLLEKVEDTSPSELI 367 Query: 340 TQLLELELAGWIAAVPGG 357 L ELE+ G + +PG Sbjct: 368 AALFELEMLGLVKQLPGK 385 >UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula baltica RepID=Q7UEW1_RHOBA Length = 455 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 169/364 (46%), Gaps = 10/364 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSFPRKSIE 61 ++L + L + + I G+ + A + IE Sbjct: 92 LVQLCLLPGLGPRTLTSLMEAFGSARAILNADKNSLASVHGVGPKLAHVIDTASDHVDIE 151 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 W + +++ YP + D P +F G + + +A+VG+R + Y Sbjct: 152 DVFAWCAAMDVNILRRGQASYPAAMEELDDAPPLMFCRGSILPRDTISVAIVGTRHATAY 211 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + R LA GVTI SGLARG+D AH+AAL+ G +IAVLG GL I+P ++ Sbjct: 212 GLQQTRRIAMDLARAGVTIVSGLARGVDTAAHRAALEAEGRTIAVLGGGLGKIYPAENSP 271 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + E GA++SE+ P FP+RNRII+ L + LV+EA +RSGSL+TAR A Sbjct: 272 LADKISEH-GAVISEYAPMAQPRGGMFPQRNRIIAALGQATLVIEAPMRSGSLITARLAS 330 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E G V ALPG + + S+G H LI+ GA LV +++LE L + A Sbjct: 331 ELGHSVGALPGQVNSRASQGCHHLIRDGATLVQHADDVLELLGPLSGNVSLATAVEGGDV 390 Query: 302 DQQDV----ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + ++LA VG T +D V +G P V + LE+ ++ + G Sbjct: 391 VRDGREMTLNDVERQVLAAVGTSGTAIDEVTLSSGLPASRVNAIVSILEMKRFVRRLSGQ 450 Query: 358 YVRL 361 YV Sbjct: 451 YVSR 454 >UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium perfringens RepID=Q0SSB7_CLOPS Length = 360 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 9/362 (2%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + + L S+ + + V + + + + +I ++ A +F + Sbjct: 1 MKEVDLNYKIWLGSLK-ISNNIKVELLNQLGNEENIYIHRKDIEETGIKCASKFKNDINI 59 Query: 59 SIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + + ++ ++ + YP +L + P LF +G+L +A+VGSR Sbjct: 60 DLNSRVINDINKKDYKIVTYLDKDYPKRLKNIDEPPYILFYKGDLERAEDTNVAIVGSRK 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 YG+R L L GV I SG A G+D AHK ++ N ++AV G G+N +P Sbjct: 120 CDSYGKRCASLIASGLGKAGVGIVSGGAFGVDTEAHKKCVEENFYNVAVFGCGINLDYPV 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L ++ + G ++SEF D PPL YNFP+RNRIISGLS+ V+VV+A +SGSL+TA Sbjct: 180 YNRELYKKII-KNGCIISEFFPDTPPLRYNFPQRNRIISGLSEAVIVVQAGEKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A+ QG++VFA+PG + + S+G + LIK GA + T ++L ++ F + ++ Sbjct: 239 NYAINQGKDVFAVPGDVFSSQSKGCNNLIKDGAGIFTNIGDLLNSIHFKIKKEGKCNKDG 298 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ + LL+ + + + +D + + L EL+ I +PG Sbjct: 299 KK----EENSEINQLLLSILENNILHIDDIIRVTNIDTSIIYELLCELQFENKIEVIPGD 354 Query: 358 YV 359 Y Sbjct: 355 YY 356 >UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR97_CHIPD Length = 378 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 9/369 (2%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSF 55 M + + L I + ++ S + ++ G + + +A F Sbjct: 9 MQEELRHQIALTQIPQIGDIVAKKLLAHFGSASEVLNASRKELGNIPDIGIVRADAIFQF 68 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + + + +LE+ N I S YP +L D P L+ +G + + +++VG Sbjct: 69 RDYRKADKEIDFLEKHNIQAIFYTSTAYPKRLHHCADSPVMLYYKGTTNLNAARMVSIVG 128 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R YG+ E L + V I SG+A GID +AHK A+Q +I VL +GL+ I Sbjct: 129 TRTPGEYGKNMCAQLVEALTSHNVVIISGMAYGIDIIAHKRAVQQRIPTIGVLAHGLDRI 188 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P++H A +++ GG L +EFP P +FP RNRI++G++ +V+E+ + GS+ Sbjct: 189 YPQQHRSTAMEMIDNGGLL-TEFPSYTQPDRQHFPMRNRIVAGIADATIVIESGTQGGSM 247 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDA 293 +TA A ++VFA+PG +P + G + LI+ A+L+T + L+ + + P A Sbjct: 248 ITADIANSYNKDVFAIPGRANDPHAAGCNELIRTNKAMLITSATDFLQTMGWHTDNTPSA 307 Query: 294 PENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ GD +D + + + P +V + +L+LE+ + Sbjct: 308 VKFNPQKELFITLDDAEKHIVTLFSGDAEKHIDELRKESHLPGSQVNSLVLKLEMRHVLK 367 Query: 353 AVPGGYVRL 361 ++PG +L Sbjct: 368 SLPGQKYQL 376 >UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas macleodii RepID=B4S293_ALTMD Length = 369 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 196/358 (54%), Gaps = 5/358 (1%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W+ L S + ++ ++ Q + L +K I+++L Sbjct: 14 AWIALASAQRVSPKLWLQALEQHQCSP--IELLSQASSLGSTVTTLTDQITQKHIDTALN 71 Query: 66 WLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W + N H+I DS YPP L P LF G L Q+A+VGSR S G+R Sbjct: 72 WAKVSENRHVITLDSPDYPPLLKQLDSPPLVLFATGSKALLKQPQIAIVGSRRASIQGKR 131 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 F L+ G+ ITSGLA GID AH A+ + +IAV+G G + I+P ++++L Sbjct: 132 IATDFAMGLSNNGIAITSGLAMGIDSAAHVGAISGSIGTIAVMGTGPDKIYPAKNSKLYN 191 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + GG V+EF P ++FPRRNRII+ LS G LVVEA ++SG+L+TA A + G Sbjct: 192 EIHDSGGVSVTEFFPGQGPKPWHFPRRNRIIAALSLGTLVVEAKIKSGTLITANLAADMG 251 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 R+VFA+PG + + SEG HWLI+QGA LVT +IL L+ G+ + + + Sbjct: 252 RDVFAVPGSLFHAYSEGCHWLIQQGAKLVTNVNDIL--LEIGVQPQQMSFDVGEQNEKSA 309 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +L +LLA+V ++T +DV+A+R V + + LLE EL G +AAVPGGYV+LR Sbjct: 310 VNSLATDKLLASVEYDITAIDVIAQRNALSVSQAMASLLEYELRGLVAAVPGGYVKLR 367 >UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVN1_CHLT3 Length = 386 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 177/369 (47%), Gaps = 16/369 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRF---------LS 54 L L I S+ + + + + + + G + + ++ Sbjct: 17 LILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMA 76 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +E+ + L+ YP L P LFV G L S LAVVG Sbjct: 77 LAEAQAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVG 136 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ R C+ L +TI SGLA GID AH+AAL+ G ++AVL G++ I Sbjct: 137 TRQATDYGKKATRKLCQGLVANRMTIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + ++ +++E GAL+SE L A FP+RNRIISGLS G LVVE+ + G+L Sbjct: 197 YTDPKGKIYPAIIE-NGALLSEEWLGSEITAEKFPKRNRIISGLSLGTLVVESDYKGGAL 255 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA AL+Q REVFA+PG I + G + LI+ A LV E+IL LQ + Sbjct: 256 ITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLF 315 Query: 294 PENSFYS-PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 EN P Q+ ++ ++LA + +D + E++G V ++ L ELEL + Sbjct: 316 EENGHRPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVE 375 Query: 353 AVPGGYVRL 361 +PG + + Sbjct: 376 QLPGKFFKR 384 >UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter RepID=C6XT86_PEDHD Length = 363 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 10/361 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP-RKSIES 62 + L I S+ + I Q G+ A + L+ + E Sbjct: 7 IGLTLIKSVGDVIARNLLDQFGSAEAIFKADKYQLMEISGIGEVVATQILNHDVFEIAEK 66 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L ++++ ++ E YP +L D P L+ +G H +++VG+R + YG Sbjct: 67 QLAFIKKHRIQVLFYTDENYPWRLRNCHDAPVLLYYKGNADLNHFRIISIVGTRRATEYG 126 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R ETLA V I SGLA GID AHK +LQ N ++ VL +GL+ I+P H + Sbjct: 127 RKLCRELAETLAPYRVIIVSGLAYGIDVAAHKESLQQNIPTVGVLAHGLDRIYPALHKPV 186 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A +L GG L +EF D P NFP+RNRII+G++ +VVEA + G+L+TA A Sbjct: 187 AQKMLLNGGLL-TEFLPDTIPDKENFPKRNRIIAGIADATIVVEATTKGGALITADIANS 245 Query: 243 QGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R+V+A PG + S G ++LIK A L++ ++++ L + + ++S Sbjct: 246 YNRDVYAYPGRTNDQYSAGCNFLIKTNRASLISHAKDLIYYLGW---DEIVSEKSSSQLQ 302 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +++ + +D + ++ ++ LL LE+ G + A+PG + +L Sbjct: 303 LPVGLSDEEQKIVNILTATPIGIDEIGQQLNFSQSKLAMHLLSLEMQGILVALPGKFYKL 362 Query: 362 R 362 Sbjct: 363 N 363 >UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiaceae RepID=B3QQG8_CHLP8 Length = 387 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 183/373 (49%), Gaps = 15/373 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQ---------RFLS 54 L L + + + S + + G+ A+ + + Sbjct: 15 LMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRN 74 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + + E + + N ++ YP L D P ALFV G + AL + LAVVG Sbjct: 75 KAKLAAEEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVG 134 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ C L + G+TITSG+A GID AH A+Q GV+IAVLG G++TI Sbjct: 135 TRKATSYGKQATEHLCRDLVSMGLTITSGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTI 194 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + RL +LE GGA+V+E L P+ NFPRRNR+I+G++ G LVVE+ ++ GS+ Sbjct: 195 YTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTLGTLVVESDIKGGSM 254 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 +TA ALEQ REVFA+PG I S GP+ LI + A ++IL L +LP A Sbjct: 255 ITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPP-AAFLPTA 313 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 P + ++ + E +D++AE+ G P+ +++ L ELE+ + Sbjct: 314 GRQDVDKPSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQ 373 Query: 354 VPGGYVRLRRACH 366 PG +R Sbjct: 374 EPGQLFSIRPPER 386 >UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G349_ABIDE Length = 366 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 112/366 (30%), Positives = 167/366 (45%), Gaps = 14/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV-----LQQTGLTLRQAQRFLSF 55 M + + L + + + V L+ GL + +R Sbjct: 1 MREELLMFWLSLEGHVAKIKYDILVANYGSLAEAYEAVSKGKCLKLKGLGDKLLERLKKL 60 Query: 56 -PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + IE ++ ++ YP +L P LF +G L ++VVG Sbjct: 61 SDKSEIEEKYECMKDKGVKYSHYFNKDYPDKLRNICSAPIGLFYKGSLPDNEEKIISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SR + G + + L+ GV+I SG+A GID AH ALQ N G + AVLG G + Sbjct: 121 SRDATDKGLYYANKISKELSDSGVSIVSGMALGIDSSAHYGALQGNKGKTYAVLGCGADV 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L S++E+GG ++SEFPL P+ NFP+RNRIISG+S GV VVEA +SGS Sbjct: 181 CYPPNNIELYLSIIEKGG-VISEFPLGTQPVRANFPQRNRIISGISDGVFVVEARDKSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA LEQG+ ++ALPG P S G + LI+ GA LV E ++ILE+ F + + Sbjct: 240 LITADMGLEQGKNIYALPGRSEEPLSRGTNKLIQYGAKLVNEAKDILEDFDFPILNIKQE 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + A + + + G E+ LLELE G++ Sbjct: 300 CLQNLILES------HEKIVYATLCLTPKHISEILSETGLDEGELFKVLLELEFKGYVRR 353 Query: 354 VPGGYV 359 Y Sbjct: 354 TSFEYY 359 >UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X184_DESRD Length = 395 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 170/380 (44%), Gaps = 15/380 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF----PR 57 + L L L R+ A + Q +F Sbjct: 14 EELWACLALRYTPGLGPKTQRRLFDAYGSARRAVADAAHWGQWDWMRPQAVAAFTSRKWE 73 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + ++ + YP +L P ++ G+ LH+ +A+VGSR Sbjct: 74 QEARREWDAARRQEMRVVLWSEDQYPVRLREIEAAPPFVYAYGDTSLLHAPCVAMVGSRQ 133 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG++ R LA G+T+ SG A+GID AH AL G S+AV+G GL+ ++P Sbjct: 134 CSRYGKKVARALAADLAQAGITVVSGFAQGIDSHAHTGALNGVGSSVAVMGTGLDIVYPA 193 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R +L + G L+SEF PP NFPRRNRIISGLS V+VVEAAL+SGSL+TA Sbjct: 194 RQHQLWQEVAAH-GCLISEFAPGTPPEPKNFPRRNRIISGLSLAVVVVEAALQSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH--------- 288 + ALEQ REVF +PG + G G H L++ GA LV E+I+++L + Sbjct: 253 QLALEQDREVFVVPGSVLESGFAGGHALLRDGARLVRNAEDIVQDLGPMVSVTSPRPGAL 312 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELEL 347 L + S + + ++A + +E VDV + LL LE+ Sbjct: 313 PLDPPQDRSASELTWRGGSALENAVVARLSEEDRVHVDVFLRELADSSQAINHALLMLEM 372 Query: 348 AGWIAAVPGGYVRLRRACHV 367 + +PG Y L V Sbjct: 373 QEVVEKLPGMYYALAPGVRV 392 >UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteobacteria RepID=Q0AIZ9_NITEC Length = 373 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 185/370 (50%), Gaps = 9/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSF--PR 57 D E WLRL + + R+ + + A + + A Sbjct: 5 RDIESWLRLGLTEGVGSGSLRRLLVAFGDPAEVLAANQRALEGVVKKTVATSIFQRKVDE 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++ WL+ P + LI YP LL D P L+ +G+ L LA+VGSR Sbjct: 65 DKFAKTIEWLQDPLNSLITLADPDYPGLLLNIPDPPPILYFKGQRKFLARPALAIVGSRN 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G F E + G + SGLA+GID AH+ L+ S+A++G GL+ ++P Sbjct: 125 ATPQGFANADAFAEAASNAGFCVISGLAQGIDTAAHQGGLRGASSSMAIVGTGLDLVYPS 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ LA L ++ GAL+SEFPL VP ++ NFPRRNRIISG+ LVVEA L SGSL+TA Sbjct: 185 KNRELAHKLADE-GALISEFPLGVPAMSKNFPRRNRIISGMCHACLVVEATLYSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF----GLHWLPDA 293 R ALEQGR+V A+PG I +P S+G H LIKQGA LV ++IL+ L + P Sbjct: 244 RLALEQGRDVMAIPGSIHSPLSKGCHALIKQGAKLVENIQDILDELNHQPIQQIEAAPVN 303 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + LL + +D + R+G V V LL LEL G I + Sbjct: 304 HNETGGLVDASSDCIDDTGLLIYFDYDSIDIDTLCIRSGLTVEAVSAMLLILELEGKIGS 363 Query: 354 VPGGYVRLRR 363 +PGG + R Sbjct: 364 LPGGRYQRVR 373 >UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELQ1_CHLPB Length = 382 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 121/367 (32%), Positives = 180/367 (49%), Gaps = 18/367 (4%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF---------L 53 L L + L + + + I + G+ + A+ L Sbjct: 16 LLVLSRVPGLGPARIRALKRQFGTSNAIFHADERALAVIPGIGRKLARTITDFFRSPRNL 75 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 RKS E L L++ N L+ D YPP L D P LFV G++ A HS L+VV Sbjct: 76 DLARKSAERQLALLDRYNATLVTIDEASYPPLLKEIYDPPPYLFVRGDIQAAHSPCLSVV 135 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + C L T+G TI SG A GID AHKA L G +IA+L G++ Sbjct: 136 GTRQATLYGRKAVEHICRGLVTKGFTIVSGFAYGIDMAAHKATLDNGGKTIAILAGGVDN 195 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 H ++ ++E+ GA++SE L+ FP+RNR+ISG+SKG ++VE+ R GS Sbjct: 196 PHTDPAGKVWPRIIEE-GAILSEEWLESTISPSKFPKRNRLISGISKGTVIVESKSRGGS 254 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPD 292 L+TA AL+Q REVF++PG I + S GP+ LI K A LV E+I+ L + Sbjct: 255 LITASYALDQNREVFSVPGSIFSTTSAGPNALIEKSQAKLVNGAEDIIAEL---CSYPAT 311 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + +P + + +L + +E +D++AE+ G E++ L E+EL I Sbjct: 312 PEKTIPDTPVRVPLTPEETIILDHFSEEPLHIDMLAEKTGIEPSELLVHLFEMELKNLIE 371 Query: 353 AVPGGYV 359 PG Sbjct: 372 QQPGQMF 378 >UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B1ZNA2_OPITP Length = 382 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 18/377 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVA-KQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 + + L L ++ ++ + R+ + A ++ G+ + ++ Sbjct: 7 TERQALLVLNALPNIGPVTLNRLLAELGGDPRAALAASAKRMEAVRGVGPVISATLTNWR 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + I YP L D P L+ +G +A+VGS Sbjct: 67 EHFDLAREEERMAKSGADFITTGDAGYPKLLKEIHDPPIGLYRKGRY-GFEQPCIAIVGS 125 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + LA G + SGLARGID AH+ AL V G + AV+G G++ I+ Sbjct: 126 RRTTLYGQATAKKLGAELARLGFCVVSGLARGIDTAAHEGALSVGGKTAAVVGCGIDIIY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L + E GA++SEFP +FP RNR+++G+ + V+VVE + G+++ Sbjct: 186 PPENLALYRQI-EATGAVLSEFPFGRRADRQSFPMRNRVVAGMCEAVIVVETDVNGGAMI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A E GR +FA+PG I P S G H LI+ GA L+T +++L L + P A Sbjct: 245 TARFAGEYGRLIFAVPGRIDQPTSAGCHQLIRDGATLLTSVDDVLNELSYLGGLRPAAIP 304 Query: 296 NSFYSPDQQDV---------ALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLEL 345 S D + + D + + P+V L+ L Sbjct: 305 PKEGSADPESALGVTPSTALTPEEAAIWECFRGGAMLTPDAIIAQTRLGSPQVSAALMML 364 Query: 346 ELAGWIAAVPGGYVRLR 362 EL IA G R Sbjct: 365 ELKRLIAKRSDGAFEAR 381 >UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H0_9CLOT Length = 360 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 110/365 (30%), Positives = 171/365 (46%), Gaps = 9/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR---FLSFPR 57 M D W L L + + + + + Q + S Sbjct: 1 MEDKLYWYWLCGKVRLPIKKQKELMDIFIHPKELYKINPEILKEHMTQLEYDRFVHSRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +I+ L + N I YP +L D P +F +G+ + +A+VGSR Sbjct: 61 TAIKKGYEALHRENIRFIIQKEAAYPNRLRKIYDAPYGIFQKGQPYEEKELSIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + F + LA +GV I SGLARG+DG H+ + G ++ VLG G++ I+P+ Sbjct: 121 PTTYGFEISKKFAKELAQQGVQIVSGLARGVDGTVHREIIDKKGQAVGVLGCGIDLIYPK 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +L + ++SE+P PL ++FP RNRIISGLS G+LV EA RSGSL+TA Sbjct: 181 ENFQLFYDMYANQ-TVISEYPPGSEPLKWHFPERNRIISGLSDGILVTEARARSGSLITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C L+Q +EVFA+PG I + +G H LIKQGA LV ++IL + P++S Sbjct: 240 DCGLDQNKEVFAVPGMITDKHCQGCHGLIKQGAKLVENVDDILTEFSEFTGFSRKFPKHS 299 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S +A + + + +D + + EV+ L +LE G+I + Sbjct: 300 AKS-----LAKAEKRVYDMLSLKPKYIDEILSTSQDSYEEVIQALFQLEAKGYIKQIHQN 354 Query: 358 YVRLR 362 + Sbjct: 355 LYIKK 359 >UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteria RepID=B7JXG9_CYAP8 Length = 375 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 15/376 (3%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS- 54 M + WL IS + + R+ V G + L+ + L Sbjct: 1 MNQERAYWLAWSQISGVGPVLLKRLEQQFGSLQTAWMVSKSALGEVEGIGLKSLPKILEQ 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQL 110 + + L Q N + YP L P L+ +G+++ L + + Sbjct: 61 RSQINPLQFLEEHSQKNPNFWTPADADYPHLLKEIASPPAVLYYQGQVNLLENQGITPAI 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +VG+R + +G RW + L G T+ SG+A GIDGVAH++ L+ G ++AVLG G Sbjct: 121 GIVGTRYPTEHGRRWTYSITKALVKHGFTVVSGMAAGIDGVAHESCLEAGGRTLAVLGTG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ ++P H +L ++ +Q G ++SE+P P +FP RNRII+GLS+ VLV+EA + Sbjct: 181 VDMVYPSNHRQLHRNI-QQQGLILSEYPAGTPGDRGHFPARNRIIAGLSRAVLVMEAPEK 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SG+L+TAR A E GR+V+ LP + G LI QGA ++ E+LE L H Sbjct: 240 SGALITARYANEFGRDVYTLPNSPDVEQARGCLRLIHQGAEMIVTEGELLEMLGAIPHLD 299 Query: 291 PDAPE----NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 A + ++ + ++A ++ + E T DV+ + G EV LL+LE Sbjct: 300 QTAKQLSLFDAPIAKPLPNLAPELLKIFQAIKTEETSFDVIVQTTGLSPGEVSGGLLQLE 359 Query: 347 LAGWIAAVPGGYVRLR 362 L G + +PG + + Sbjct: 360 LEGLVNQLPGMRYQRQ 375 >UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibacteraceae RepID=C6VX12_DYAFD Length = 372 Score = 343 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 9/361 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP-RKSIES 62 L LM + + ++ + S + +++ G+ + + L+ + E Sbjct: 13 LALMHTPGIGAVTIRQLISYCGSASQVFESDYRKLIKIPGIGDKIVKAILNKSTLEYAEK 72 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + ++ L+ YP +L D P AL+ +G + + +VG+R S YG Sbjct: 73 EVVQCQKTATQLLFFTDPDYPARLRPLYDAPIALYAKGNTNFNWPRTVGIVGTRKISEYG 132 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + L + SGLA G+D AH+ ++ N ++ V+ +G + I+P H R Sbjct: 133 KAVTEQIIRDLVPYQPLVVSGLAYGVDITAHRHCIRNNLATLGVMASGADVIYPAVHQRT 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 AA + GG +V+E L P FP RNRII+GLS +VVE+ GSL+T A Sbjct: 193 AADMQANGG-IVTENALGTKPDFMRFPARNRIIAGLSDVTIVVESGRTGGSLITVEFAQN 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 REVFA+PG I P SEG ++LI+ A + T ++ E L + P++ Sbjct: 252 YHREVFAVPGMINEPQSEGCNYLIRDNKAAIFTSVTDMAEALGWTAGM-PESVPAEAQPV 310 Query: 302 DQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++LA + T +D +A + G + + + LL LE G + ++PG Sbjct: 311 SFEGFTQDEGQVLALLKQHGPTQIDELAWQTGIHLNRLASLLLNLEFQGMVRSMPGKKYG 370 Query: 361 L 361 L Sbjct: 371 L 371 >UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0A8_THERP Length = 367 Score = 343 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 188/372 (50%), Gaps = 13/372 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPR 57 M + WL ++ + + R+ L+ GL R ++ + Sbjct: 1 MDERAAWLGFHAVDGISLRQLERLIAQTGSALAAWHAPEAELRALGLPEGPLARLVAARQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E L + + +I E YPP L P ALF+ G L + +A+VG+R Sbjct: 61 AGLPEKILAQVRRVGARVIVYPDEDYPPLLREIASPPLALFLRGTLPPAEAPAVALVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + F LA GVT+ SGLARGID VAH+A L G +IAVLG G++ ++P Sbjct: 121 QASNYGIQVAATFATALAEAGVTVVSGLARGIDRVAHEATLDAGGRTIAVLGTGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + EQ GALV+EF + PP A NFP RNRIISGLS GV+V+EA RSG+L+T Sbjct: 181 PEHRALAQRIAEQ-GALVTEFLPETPPYAGNFPVRNRIISGLSLGVVVIEAPERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q R V+A+PGPI +PG+ G L++ GA V +EILE+LQ LP Sbjct: 240 ASFALDQNRSVYAVPGPIFSPGTAGILRLLRDGATPVGSAQEILEDLQLVARQLPL---- 295 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 P V ++A +G E +D +A G + ++ LLEL+L G + + Sbjct: 296 ----PAAPAVPERARPVVAALGPEPKHIDELAAELGMGIAQLSALLLELQLEGIVTHLGA 351 Query: 357 GYVRLRRACHVR 368 + L R Sbjct: 352 QHYALASPLLAR 363 >UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVU7_9BACL Length = 373 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 8/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA---VVLQQTGLTLRQAQRFL-SFPR 57 + L + + +I + H ++ GL + R F R Sbjct: 13 EKKWVLAGLHEFPGVGWKTLQQIVAYDEDWEHAIEFTAADWRERGLGPELSLRLSERFTR 72 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 IE+ L + +I YP + T P L+ G+ L+ +A+VG+R Sbjct: 73 DWIEAQLEQYDGKGIQVITRLDLEYPILMKETAQPPWVLYALGDTRLLNGLSVAMVGTRT 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + G L G+TI SG+ARGIDGV H+AALQ G +IAVLG ++ +P Sbjct: 133 PTAYGRKVGAALAGELCALGITIVSGMARGIDGVCHEAALQAGGTTIAVLGTAIDVAYPP 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H + + EQ G ++SE+P+ P FP+RNRII+G++ G +VVEA RSGSL+TA Sbjct: 193 EHVSMYRRIAEQ-GLVISEYPIGTPGHPGMFPQRNRIIAGIAHGTVVVEADARSGSLITA 251 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 ALE+ R++FA+PGPI +P S G WL+KQGA +VTE ++I E+ + L + + + Sbjct: 252 DKALEENRDLFAVPGPITSPKSRGTLWLLKQGAKIVTEAKDIWEDYEAFLPAAKETKKEA 311 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + +T D + + G + + LL L + +PG Sbjct: 312 VTGNKL---TDEERRIYHMLEQGITSFDDLLVQTGWDFGLLHSVLLSLIMKKTAVQLPGS 368 Query: 358 YVRL 361 +L Sbjct: 369 VYQL 372 >UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF53_PARUW Length = 363 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 110/366 (30%), Positives = 182/366 (49%), Gaps = 11/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E + L + + + + + + + + Q+ L ++ I Sbjct: 1 MEELEALMILTDMPLIGPVKVRFLVDYFGSAKKALSASITELSHLPGFKQKILDQWQEHI 60 Query: 61 ESS-----LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 S L +E+ + HLI YP QL D+P L+++GEL + + ++G+ Sbjct: 61 RSKKHFANLQLVEKFHTHLISFKDPSYPKQLQNIPDHPPLLYLKGELKPQDNQSITIIGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA G TI SGLARGID AH AL+ G ++A++G+GL I+ Sbjct: 121 RQATLYGLEMAKKLSYELAQAGFTIVSGLARGIDTAAHIGALEAGGRTLAIIGSGLANIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA + + GA++SEF + PP +FP+RNR++SG+S G L++EA +SG+++ Sbjct: 181 PQENHYLADQI-AKKGAVISEFSMSTPPHRSHFPKRNRLVSGMSLGTLLIEAPQKSGAIL 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 T ALEQ + ++ALPG G H LIK AILV E+I++ L P Sbjct: 240 TIENALEQKKHIWALPGRADQVNFRGNHALIKNKKAILVENIEDIVQCLDTFCFTTPIEQ 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ QQ+ LL + E ++ + +RA P+ +V + L+ L L I Sbjct: 300 KHLDLVHLQQE----EIHLLQKLPVEELSIEEIVKRAQLPIQQVNSLLMSLVLKKIIKEF 355 Query: 355 PGGYVR 360 PG + + Sbjct: 356 PGKFYK 361 >UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C5EIV8_9FIRM Length = 328 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 116/313 (37%), Positives = 170/313 (54%), Gaps = 9/313 (2%) Query: 53 LSFPRKSIE---SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 +K +E L + I YP +L DYP L+V+GEL Sbjct: 18 FDAWKKQLEPMRQEYHTLGEKGIRYITPLDTEYPERLRHIYDYPMGLYVKGELPGDGYPS 77 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 AV+G+R + YG++ LA +GV I SGLA GIDG H+ A++ G + AVLG Sbjct: 78 AAVIGARNCTSYGKQSAEYMGRELAAQGVQIISGLALGIDGAGHEGAVKGRGKTFAVLGC 137 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G+N +PR + RL +LE GG ++SE+P D P A NFP RNRIISGLS +LV+EA Sbjct: 138 GVNICYPRTNYRLFEQILENGG-ILSEYPPDEEPRARNFPARNRIISGLSDVILVMEARQ 196 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 +SGSL+TA+ LEQG+E+FALPG I + SEG ++LI+ GA ++T P ++LE++ Sbjct: 197 KSGSLITAQLGLEQGKEIFALPGRITDALSEGCNYLIRAGAGILTSPVDVLESMGIFYEK 256 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + E + +A + + + E ++ +A + G PV + ++ L ELEL G Sbjct: 257 PMFSYEKADK-----GLAKFEKMVYSCLDSEPRHLEQIAMQTGIPVSQCMSTLCELELGG 311 Query: 350 WIAAVPGGYVRLR 362 + G R Sbjct: 312 FALRTNGQCYIRR 324 >UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Porphyromonas gingivalis RepID=Q7MXB1_PORGI Length = 374 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 13/368 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + L + + ++ + I + + + +R L Sbjct: 11 EQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSV 70 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L + ++ + YP +L D P L+ +G + L++VG+R Sbjct: 71 MEEARRKLDQALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTR 130 Query: 117 AHSWYGERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + YG LA + I SGLA G+D AHKAAL ++AVL +GL+ I Sbjct: 131 NITAYGRTATERIVSGLAETIPDLLIVSGLAYGVDVAAHKAALDNGLPTVAVLAHGLDRI 190 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H +A +L GG L +++P+ P +NF RNRI++GLS LV+E+A + GSL Sbjct: 191 YPSGHRSIAMEMLRNGGLL-TDYPMGTEPERFNFVGRNRIVAGLSDATLVIESAEKGGSL 249 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDA 293 +TA A REV ALPG + S G + LI+ A LV+ +++L L + Sbjct: 250 ITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKP 309 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 +F D + + VD + G P+ +V QL +LEL G + + Sbjct: 310 QTLNFRPDSWPDTPVAEC----LLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQS 365 Query: 354 VPGGYVRL 361 PGG + Sbjct: 366 QPGGIYSV 373 >UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE1 Length = 370 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 203/370 (54%), Gaps = 9/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVA----KQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M + L+ + + ++++ + L GL+ Q ++ + Sbjct: 1 MEKLVAFYALIHCQGVSTNTVLKLTTHFQCDIADIPTLSKETLAAQGLSSAQIEQLKADY 60 Query: 57 RKSIESSLCWLEQPN---HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + I+ + WL+ + +I D YP L D P LFVEG + L QLA+V Sbjct: 61 KIPIQRIMNWLDHDSDCPRQVIYCDDADYPQYLAHLHDRPLLLFVEGNISLLTLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G+R+ F + LA+ ITSGLA+GID AH+ AL NG ++AVLG+G Sbjct: 121 GARRATEHGKRYAFDFAKQLASHHWVITSGLAQGIDAQAHRGALAANGATVAVLGHGHEH 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR HA L +L Q G ++SEF D P NFPRRNRIISGL G LVVEA +SGS Sbjct: 181 MYPRHHAHLRQQILSQQGCIISEFFPDQPAQPKNFPRRNRIISGLGAGTLVVEAKRQSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A+++ R VFALPG I + G LIK+GA+LV E ++I + Sbjct: 241 LITANQAVQENRLVFALPGRIDDENISGCLALIKEGAVLVQEIDDIESEMMEVEKPRHHP 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 S + +++++ LL +VG E+T ++ +A + P+P+V+ QLLE EL+G +AA Sbjct: 301 IYFSTKNKTEENLSPSN--LLDSVGYEITAIENIAAHSSLPLPQVLAQLLEFELSGKVAA 358 Query: 354 VPGGYVRLRR 363 V GGYV+LR Sbjct: 359 VAGGYVKLRS 368 >UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSJ1_9FIRM Length = 370 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 117/367 (31%), Positives = 168/367 (45%), Gaps = 17/367 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRK 58 ++ L S+ + L+ L+ +A F R+ Sbjct: 7 MERFFLAALCRAPSVGSRVAASLVRVFGSAQDAWHARAEALRAAHLSPERAAALHDFCRR 66 Query: 59 S---IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + E E+ L E YP +L + P LF G L L +A+VG+ Sbjct: 67 NEALPEKIAAACEKGGISLFVPSDEVYPARLKEIYNPPQTLFCRGSLDCLKHPAVAMVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+ LA RG + SG ARGID +HK ALQ G ++AVLG G++ + Sbjct: 127 RHASAYGKGAAEDIALGLAERGFVVVSGAARGIDTASHKGALQA-GATVAVLGCGVDVAY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR +ARL A + E+ GA++SE+ PLA FP RNRIISG++ G +VVEAA RSGSL+ Sbjct: 186 PRENARLLAEIAEK-GAVISEYAPGTAPLAAFFPARNRIISGVAHGTIVVEAAERSGSLI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA AL +GR+VFA+PG I + S G H LI+QGA LV ++ + G Sbjct: 245 TAEFALSEGRDVFAVPGSIYSATSRGCHRLIQQGARLVVSAADVAAEYEDGA-------- 296 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + Q++ + A + E +D + R V LL L + G + Sbjct: 297 SRTSASPPQELTEEEAAVYALLSREAALSLDELICRLQGKAANVAFLLLGLRVKGLVEET 356 Query: 355 PGGYVRL 361 P Sbjct: 357 PMRTYIR 363 >UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales RepID=C5AYG6_METEA Length = 397 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 128/392 (32%), Positives = 172/392 (43%), Gaps = 38/392 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ + + + S + LT R +R + + E Sbjct: 7 QRLDWLRLIRTDGIGPRTFRSLINRFGSASAALDALPD---LTKRAGKRAVPPTKVEAER 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + H + YP L AT P + V G+ L +A+VGSR S G Sbjct: 64 EMVAAARLGIHFLAMGEAAYPKALHATDTAPPLIAVRGDPATLLKPSVAIVGSRNASTAG 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + G+ + SGLARGID AHKA L ++AVL G + I+P HA L Sbjct: 124 LAFTERLARGFGEAGLVVVSGLARGIDARAHKATLTTG--TVAVLAGGQDRIYPENHAGL 181 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ GGA+V+E P+ P +FPRRNRIISGLS G +VVEAA RSGSL+TAR ALE Sbjct: 182 VEEIVGAGGAVVAEMPMGWVPRGRDFPRRNRIISGLSLGTVVVEAARRSGSLITARFALE 241 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE------- 295 QGREVFA+PG +P +EG + LI+QGA LV+E E +L L + + Sbjct: 242 QGREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLDPLIAGDAPQADGLNDRSE 301 Query: 296 --------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 + + L+A + D +A Sbjct: 302 TWRTPDYWDEIDFDGRAETTLPLLPAAAEPVEAPPEPRDDRERLIACLSPAPVGTDELAR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G V V T LLELEL G I G V L Sbjct: 362 STGLSVRIVQTTLLELELDGQIERHGSGTVSL 393 >UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9V3_9FIRM Length = 367 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 176/364 (48%), Gaps = 13/364 (3%) Query: 2 VDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFP 56 E+ W L SI LY D ++ K + + L+ ++ Sbjct: 7 EKRELEWFWLCSIPGLYEADRKKLLAVWDKPGRVYDAARGREQKIPVLSEKKMDAVRRHW 66 Query: 57 R-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ I ++ YP QLL DYP LF G + + +AVVG+ Sbjct: 67 ELARAQQEYHKWQRKGIQFISCENPAYPQQLLQIVDYPSGLFCRGRMVSQEETCVAVVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++ G E LA G+++ SG+A GID A +A L G S A+ G G++ + Sbjct: 127 RMCTYNGRNTAESLAERLAENGISVVSGMAYGIDARAQEACLNAGGKSYAIPGCGVDICY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + RL +L++ GG ++SEF PLA++FP RNRIISGLSK V+VVEA +SG+L+ Sbjct: 187 PRENRRLYEALIQSGG-VISEFYPGTAPLAFHFPMRNRIISGLSKIVVVVEARKKSGTLI 245 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+V+A PG + + S G + LI+ GA ++T+ +E LE F L Sbjct: 246 TAELALEQGRDVYAFPGRMQDALSAGCNRLIQDGAGMITDIDEFLETNGFLLKRAAKEKN 305 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +A + + + + + +AE PV +V+ L LEL G ++ Sbjct: 306 SKMV------LASSEKLVYSCLDSDAKNLQTLAEETDIPVWQVMGALSALELKGLVSESG 359 Query: 356 GGYV 359 Sbjct: 360 KNNY 363 >UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_HAEIN Length = 373 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 148/344 (43%), Positives = 195/344 (56%), Gaps = 12/344 (3%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSFPR 57 M D LRLM + L G + +I + + D V +Q G Q +R+ Sbjct: 1 MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEA 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K IE +L W ++ +HL+ S FYP L T +P LFV+G L AL Q+A+VGSR Sbjct: 61 KFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YGE W + F L+ G TITSGLA GIDG H+A + + G +IAVLG+GL I+P Sbjct: 121 CTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPS 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H RL+A ++E GALVSEF + P+A NFPRRNRIISGLS G LVVEA +SGSL+TA Sbjct: 181 KHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------QFGLH 288 R ALEQ REVFA+PG I N S+G H LIKQGA+LV ++ILE L + Sbjct: 241 RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD 300 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAG 332 + P + A P+L + +G +D +AE Sbjct: 301 QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFN 344 >UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium RepID=B1KWM8_CLOBM Length = 361 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 104/367 (28%), Positives = 185/367 (50%), Gaps = 17/367 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRF----L 53 M++ +W + + + ++ S+I + + + + + Sbjct: 1 MIELNLWYA---SAKVSNNIKTKLLQEFKSVSNIFDYVQNFKYEKNVNINIVKVINNFKI 57 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAV 112 ++ ++ I++ + Q N +I + YP QL D P LF +G + ++ A+ Sbjct: 58 AWNKEKIQNMKNKILQDNIRIINYMEKEYPSQLRNYEDAPAVLFYKGNIEKVNILKSAAI 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR S YG + ++ E LA + I SG+A+GID AH ++ G + A+LG+G++ Sbjct: 118 VGSRKCSIYGMKVTKIISEALADNNIMIVSGMAKGIDYYAHLYCIENRGFTTAILGSGID 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P+++ ++ ++ + G ++SEF PPL+YNFPRRNRIISGLS V+VVEA +SG Sbjct: 178 VVYPKQNKKIYD-IISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+T ALEQG++V A+PG I + S G + +IK+GA + T E+IL + + + Sbjct: 237 SLITTEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINN 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 +N D ++ + E +D + + + + L EL+L + Sbjct: 297 NKDNKMALKD-----SLQGKVYNVLSHEPKHIDDLLKLMDIDIKHLYEVLFELQLKKEVI 351 Query: 353 AVPGGYV 359 + G Y Sbjct: 352 CLAGNYY 358 >UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7MYI3_PHOLL Length = 361 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 180/362 (49%), Positives = 226/362 (62%), Gaps = 1/362 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+WLR+ IS L + +A + VL+ +GL+ Q +F + + Sbjct: 1 MEAMEVWLRMKMISHLATERAANVAEKLLYSGSRYLTVLKDSGLSPEQCLQFTKVNKTLL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 S L WLEQP HHL+ YPP L P LFV G+ L Q+A+VGSR S+ Sbjct: 61 ASCLKWLEQPEHHLLTYSHPSYPPLLKQIHTPPLVLFVAGKPDILLKKQVAMVGSRTASY 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGR+F L + I SGLA GIDG+ H+AAL G ++AVLG+GL I+P RH Sbjct: 121 YGERWGRIFASELVGYELVIASGLAIGIDGICHRAALDSGGKTVAVLGSGLGQIYPHRHG 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSEF D PP A NFPRRNRIISGLS V+VVEA SGSL+TARCA Sbjct: 181 LLAKQI-EENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEAGQNSGSLITARCA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPG +GN SEG HWLIKQGA L T +I+E++ L WL Sbjct: 240 LEQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATNAMDIVEHVYSSLQWLNMERTEEEVK 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 P + LPF ++L NVG EVTPVD++A+R+ P+ EV+T+LLELEL G + V GGYVR Sbjct: 300 PQFEQTELPFTDVLVNVGAEVTPVDIIAQRSSLPITEVMTKLLELELLGKVTVVAGGYVR 359 Query: 361 LR 362 + Sbjct: 360 VN 361 >UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2TJ37_CLOBB Length = 352 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 100/363 (27%), Positives = 182/363 (50%), Gaps = 19/363 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M++ E+W L+ I + + + + +I + ++ +F + + Sbjct: 1 MLNYELWFILLDI---SNKEKINLIDEYESEENIYNNFENILKENKKLQKKLGNFEKNDL 57 Query: 61 ESSL----CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q I + Y +L P LF +G+++ ++ +A+VG+R Sbjct: 58 VYQIISVNNTLNQKGIGYITYSNPLYKERLKLLLPTPYYLFYKGDINLINDKSIAIVGAR 117 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y +L + + T +T+ SG ARG+D +AHK+AL+ G +I VLG G++ ++P Sbjct: 118 KCSNYALVVTKLLTKEIITNNITLISGGARGVDSIAHKSALENEGKTIIVLGCGIDVVYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + ++ + G ++SEFPL PL +NFP RNRIISGLS+GV+VVEA+ +SGSL+T Sbjct: 178 SENIALFSKVI-KDGLIISEFPLGTKPLRHNFPLRNRIISGLSEGVIVVEASEKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A EQ ++V +PG I G++G + LIK G +++ +++ + Sbjct: 237 ARIAQEQNKDVLVVPGSILYEGAKGSNKLIKDGCDVLSSIDDLNKFFD-----------T 285 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + + E+L + D +D + +++ + L E+++ I +PG Sbjct: 286 NHIDIEPMKIRPEKREILDMITDAPIHIDDIFKKSCVDRGALYALLFEMQIKNEIICLPG 345 Query: 357 GYV 359 Y Sbjct: 346 NYY 348 >UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus RepID=B5YFC8_DICT6 Length = 364 Score = 339 bits (870), Expect = 8e-92, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 169/365 (46%), Gaps = 18/365 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 D L S L V + + L Q F+ F RK Sbjct: 7 EDKPYIYALSFFSPL-FRRWREWIDVV-SPKDFFLLSESELINLFLGSSLIQEFIIFRRK 64 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +E LE+ + E +PP L + P L +G+L + +VG+R Sbjct: 65 FDLEREWEKLEENKVKMTTLWEEDFPPLLKEIKNAPLFLLYKGDLKGD--KFIGIVGTRR 122 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG + F + L G + SGLA GID AH+ A++ G + AVLG+ L+ I+P Sbjct: 123 PSSYGIKMAEAFSKELVKYGFIVVSGLAYGIDTYAHRGAIEGGGKTFAVLGSSLDHIYPS 182 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++E GA++SE+PL P Y FP+RNRIISG+ +GVLV+EA +SG+L+TA Sbjct: 183 GNLKLAERIIE-NGAIISEYPLGTKPARYTFPQRNRIISGICQGVLVIEAGEKSGALITA 241 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A +GR+VFA+PG + + S G + LIK GA +V + +ILE + N Sbjct: 242 SFAANEGRDVFAIPGRLTDERSVGTNKLIKDGAKMVVDVFDILEEYNIAYEIKKERRFN- 300 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + +L+ + E ++ + + + ++ ++ L+ G + PG Sbjct: 301 --------ITPEEKFVLSFLNSEPIFIEDLMKNLNIDLSTLMFIIISLQGKGLVEEYPGL 352 Query: 358 YVRLR 362 + Sbjct: 353 RYARK 357 >UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIM7_9CLOT Length = 366 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 132/365 (36%), Positives = 192/365 (52%), Gaps = 11/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLS-FPR 57 M + L L + M +I + + ++ LT Q + L Sbjct: 1 MDLDLLHLWLGMFPDITNMTMGKILAYFGGLQELWEAPDREIQGALTEIQGSKILELRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAVVGS 115 K I + L++ N I ++P +LL D P L+ G + L + +AVVG+ Sbjct: 61 KKIIAYKNRLKERNITYIYPGHPYFPEELLNIPDCPRLLYARGRVEELALNRPGIAVVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGNGLNTI 174 R S YG+ R F LA+ I SGLA GIDG A +AA++ NG +IAVLG G+N Sbjct: 121 RKASAYGKEIARSFVSKLASYQTNIISGLAAGIDGTAQRAAVEIENGFTIAVLGCGINIC 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + L + E+ G ++SE+ LDV P + FP RNRIISGL+KGVLVVEA +SGSL Sbjct: 181 YPRENYDLYECI-ERSGVILSEYGLDVEPAKWRFPLRNRIISGLAKGVLVVEAQKKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREV+A+PG IG+ SEG + LI+QGA+LVT+ +I++ L Sbjct: 240 ITADQALEQGREVYAVPGRIGDRNSEGCNQLIRQGAMLVTDAADIIDELGLCKKEEIAQK 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ LP E+ A +G +V ++ + R QP V++ L ++E G+I Sbjct: 300 KDMVCREQLD---LPEQEIFACLGRDVVYIEDICSRVDQPPALVLSTLFDMEKKGYIRQ- 355 Query: 355 PGGYV 359 P Y Sbjct: 356 PMRYY 360 >UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding protein n=16 Tax=Acinetobacter RepID=B2I112_ACIBC Length = 376 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 183/354 (51%), Gaps = 10/354 (2%) Query: 19 DDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSF----PRKSIESSLCWLEQP 70 +I + GL +R F + E + + Q Sbjct: 24 VSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQSQAQFEQLVQQVRQH 83 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 ++ D YP QLL TD+P +F +G+ AL Q+A+VGSR S +G + F Sbjct: 84 TDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFA 143 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ +G I+SGLA GID AH+ A + +IAV G GL+T +P ++ +LA +L + Sbjct: 144 YYLSEKGFFISSGLAYGIDEAAHQGA-STHQRTIAVTGTGLDTTYPAQNKKLAEHILAKN 202 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA+++EF PPL +FPRRNRI+SGLS GVLVVEA L+SGSL+TA A EQG+ VFA+ Sbjct: 203 GAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEATLKSGSLITANKAAEQGKTVFAI 262 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-FGLHWLPDAPENSFYSPDQQDVALP 309 PG I + +G H LI++GAIL+ PE+I+E+L + + + ++ Sbjct: 263 PGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIPEH 322 Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 +L ++ +D + PV E+ + L+ELEL G G Y+R R Sbjct: 323 LIDLYQSLDWVGQNIDQLIVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS 376 >UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellaceae RepID=A6VLU4_ACTSZ Length = 376 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 138/351 (39%), Positives = 188/351 (53%), Gaps = 14/351 (3%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAH--WVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 M E LRL+ + L + + +I + DA G T Q +R+ R Sbjct: 1 MDKYTETLLRLLQVPRLGANTVSQILTTIELNTLLSYDADAFYAIGWTTYQIKRWFKPER 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K I+ +L W ++ + +I YP L P LFV+G L Q+A+VGSR Sbjct: 61 KYIDPALEWGQKRGNQIIHCFHLDYPYLLKQIESSPPVLFVQGNTGLLIHPQIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG W + F L G +TSGLA+GID +H+AAL V G ++AVLGNGLN I+P Sbjct: 121 CSDYGSYWAKYFAAELCAAGFAVTSGLAKGIDAYSHQAALDVQGKTVAVLGNGLNQIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++L+ G LV+EF D PPL NFPRRNRIISGLS LVVEA+ RSGSL+TA Sbjct: 181 VNRKLAQAILDNDGTLVTEFIPDQPPLPANFPRRNRIISGLSLATLVVEASARSGSLITA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL---------- 287 R ALEQ REVFA+PG + N S G H LIKQGA+LV ++++EN+ + Sbjct: 241 RFALEQNREVFAIPGNLNNDFSRGCHKLIKQGAMLVENAKDVIENIPYYGFTNMQLRDVK 300 Query: 288 -HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 P + P + P+L +G ++ VD +A + G V Sbjct: 301 DVLKATVPCPNPRPPSARHPDPQHPDLFKLIGHDLISVDELATQTGLGVEA 351 >UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=A5N825_CLOK5 Length = 366 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 173/367 (47%), Gaps = 20/367 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ------TGLTLRQAQRFLS 54 M ++W + + I + + I + + Sbjct: 1 MNIYDLWFA---SVRMSNKIKINIINRFSNIQEIYEKNIYDNNYIYSVKKNDKIYMELKK 57 Query: 55 FPR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAV 112 + +++ + + + + E YP +L D P LF +G + L++ +A+ Sbjct: 58 AWNTEKLQNLMEYCLKEGIKTVNFYEEDYPERLKNYDDSPPVLFYKGNIKNLNNNLNVAL 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S+YGE L + ++ + + SG+ARGID AH+ +++ G + VLG+G++ Sbjct: 118 VGARDCSFYGENITSLISKEVSINNINVISGMARGIDSCAHRTSIESGGYTCGVLGSGVD 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P ++ +L +L Q G ++SEF P AYNFP RNRIISGLS +++VEA +SG Sbjct: 178 VIYPSKNKKLYEDIL-QKGCVLSEFIPKTRPYAYNFPLRNRIISGLSDVIIIVEAGDKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA CALEQG++V A+PG + + S G + LI+ GA + T +++ + L Sbjct: 237 ALITAGCALEQGKDVMAVPGSVFSSKSRGTNKLIRDGAHVFTCLQDLFQLLSLSYMNKNY 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 E + ++L +G +D + + ++ L EL+L I Sbjct: 297 KKE--------DILNDKEEKILKIIGQIPRNIDEICRITNIDIKQLYELLFELQLKNKII 348 Query: 353 AVPGGYV 359 + G Y Sbjct: 349 CLSGNYY 355 >UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017886C0 Length = 391 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 30/388 (7%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPRKS 59 D + + L + + R+ + A + GL + +A + + Sbjct: 4 DRLLLIALHESEGIGWKTINRMVLNGELHEGLLSYDAQDWRACGLPVEKANKLAKEFPIA 63 Query: 60 IES-----------SLCWLE--------QPNHHLIPADSEFYPPQLLATTDYPGALFVEG 100 +E L +E + +I A YP L ++ P L+ G Sbjct: 64 VERKRVELSNDEEVELRQVEDKVWNLTNRTKIRIITALDAVYPDMLKSSPQAPWVLYCIG 123 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 + H L + +A+VG+R + YG + + E L G+ + SG+ARGID V H+ AL+ Sbjct: 124 DPHLLSTPGIAMVGTRMPTGYGRKVASMLSEALTRAGLMVVSGMARGIDSVVHETALRSG 183 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++AVLG G++ I+P + L + + G ++SE+P L FP+RNRII+GL+ Sbjct: 184 GPTVAVLGAGIDVIYPPENRSLYEEIAAK-GLIISEYPPGTKALPGFFPQRNRIIAGLTL 242 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 G +VVEA RSGSL+TA ALE GR+VF++PGP+ +P S G LIKQGA +VTE +I+ Sbjct: 243 GTVVVEADARSGSLITADLALEAGRDVFSVPGPLTSPKSRGTLDLIKQGAKMVTEAGDII 302 Query: 281 ENLQFGLH-------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 E L + + ++ + +D + E Sbjct: 303 EEYDSWLPKGVSDTYNKERRAPRQERPDELAGLTNDERQIYHMLEQGPGSLDEMIECTRW 362 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + LL L + I +PG ++ Sbjct: 363 DFGHLHSVLLSLIIKKQITQLPGAIYKI 390 >UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDV3_MAGSM Length = 365 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 124/364 (34%), Positives = 173/364 (47%), Gaps = 13/364 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 WL+LM L ++ A I + R +E L Sbjct: 8 AWLQLMLTPGLGPISLLHYERQFATPHAILRAL-------PRLKPELTLADASWVERLLT 60 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHSWYGER 124 Q + YP QLL +D P LF++G+ +A+VG+R S GER Sbjct: 61 QTHQMGATALHWREPAYPQQLLEISDPPPLLFIQGDGALLNQEPLIAMVGTRRCSRNGER 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L +T SGLA GID AH +L G ++AVLG GL+ +P+ + +L A Sbjct: 121 FAHKLAADLGQMRLTTVSGLAVGIDSAAHAGSLLGGGATVAVLGCGLDVSYPKPNMQLKA 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ Q G LVSE+P P FPRRNRIISGLS+GV+VVE L+SGSL+TAR ALEQ Sbjct: 181 QIIRQ-GCLVSEYPPGTQPHPKRFPRRNRIISGLSRGVVVVEGGLKSGSLITARMALEQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE----NSFYS 300 REVFA+PG + + S G H L+K+GA LV ++++ L +G A S Sbjct: 240 REVFAVPGAVDDERSRGVHQLLKEGATLVESAADVVQALAWGGVVPEQAKRVAVIPSGGV 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++A +GD VD + E+ + LL+LEL G I GG + Sbjct: 300 SEVLPDIPGAASVVAALGDGALTVDGLLRLCHLTPAELSSTLLQLELCGIITREMGGTLA 359 Query: 361 LRRA 364 L Sbjct: 360 LVPQ 363 >UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7K2_9CLOT Length = 348 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 107/360 (29%), Positives = 172/360 (47%), Gaps = 18/360 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E+W L SI + + + +S+I Q+ + Q + + I Sbjct: 4 MKNDELWFILTSI---SNEKKLLLLEKYENESNIRN---QKNEIREFQKIKDKDISEEKI 57 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ I S+ YP L + P LF +G L L AV+G+R + Sbjct: 58 SDFNNYINSNGIGYITIKSKEYPETLKHIEEPPYVLFYKGNLELLMGSLAAVIGARKCTQ 117 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG ++ L+ +T+ SGLA GID VA K AL+ +G +I +LG G++ ++P+ + Sbjct: 118 YGIEIAKIMGRELSENNITVVSGLAAGIDSVAQKVALEYSGKTIGILGCGIDIVYPKCNK 177 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + G L+SEF PP++YNFPRRNRIISG+S V+VVEA +SG+L+T A Sbjct: 178 FLYEKVI-REGLLISEFLPKTPPMSYNFPRRNRIISGISDKVIVVEATKKSGTLITVDYA 236 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L G+E+ A+PGP+ N SEG + LI+ GA T E++ + Sbjct: 237 LSIGKEIMAVPGPVINGNSEGCNKLIRDGAKPFTGMEDLYDFFNIKKD-----------I 285 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ + LL + +E +D + E + L E++ I +PG Y Sbjct: 286 KEKNENNGYKEYLLKVIDNEPKHLDDIIESVNVDRKVLFELLFEMQNRNEIICLPGNYYA 345 >UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogaceae RepID=B1L9Q3_THESQ Length = 337 Score = 337 bits (865), Expect = 3e-91, Method: Composition-based stats. Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 16/320 (5%) Query: 43 GLTLRQAQRFLSFP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE 101 ++ ++FL ++ +E + + N L+ + YP L P LFV G+ Sbjct: 32 NADPKKTRKFLEKCGKEELERQKELIRKHNVKLVSFWEDDYPQHLREIRYPPAVLFVRGD 91 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L + VVG+R + YG + F + L+ I SG+A GID VAHK AL G Sbjct: 92 AELLKEKCVGVVGTRRPTSYGVNVTKRFVKLLSEY-FVIVSGMAFGIDSVAHKEALSSGG 150 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 ++AVLG G++ ++PR + RL ++ + G +VSE+P+ ++FP RNRII+GLS Sbjct: 151 KTVAVLGTGVDVVYPRSNERLFHEIV-KNGCVVSEYPMGTRARKHHFPARNRIIAGLSDA 209 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 ++V EA ++SG+L+T + ALE GR+VFA+PG I SEG ++LIK GA +T+ E++ Sbjct: 210 IIVTEAPIKSGALITVKFALESGRDVFAVPGDIDRKTSEGTNYLIKSGAYPLTDEEDLET 269 Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + + ++ + VD + E G V EV+ Sbjct: 270 HFGI-------------RRIASPSLDDDKKKIYDLLRSSPKTVDELVEELGWSVSEVLRV 316 Query: 342 LLELELAGWIAAVPGGYVRL 361 + E+EL G I G Y L Sbjct: 317 ISEMELMGMIWFDGGAYRLL 336 >UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2Y2_PAESJ Length = 371 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 8/358 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPRK---SIE 61 + L S + + + ++D G QA+ + E Sbjct: 13 IMLHECSGIGWHTVQKAVAH-KAWENVDGKSEADWMAIGFGRAQAEAAARRWNEPYDWPE 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 S ++ +I E YP +L P L+ G++ L +A+VG+R S Y Sbjct: 72 SPYLRAQKLGAAVITPYDEEYPEELHRIPQPPWVLYALGKVELLKRPSIAIVGTRNPSAY 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G E L+ RG+T+ SGLARGID AH+AAL+ +G +IAVL + ++ +P + Sbjct: 132 GRHTALSLSEELSRRGLTVVSGLARGIDSKAHEAALRGHGSTIAVLASPVDHCYPPENRS 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ + G ++SE P+ FP RNR+I+GLS G +VVEAA SGSL+TA AL Sbjct: 192 LYQQIV-REGLILSESPVGSSLHPGMFPLRNRVIAGLSLGTIVVEAAKGSGSLITADQAL 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GR+VFA+PGPI +P SEGP+ LI++GA LV+ + ILE + L + S Sbjct: 251 EMGRDVFAVPGPISSPKSEGPNSLIREGAKLVSSADHILEEYSWLEGKLAALTKPKPASA 310 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ +++ + D ++ + + P + L+ L + I PG Sbjct: 311 VAASMSAEEQKIIDLLRDRPLTINELHQLTMIPFGHLSALLINLCIKRKIEQQPGAVY 368 >UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Rickettsiales RepID=Q5FFF2_EHRRG Length = 375 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 7/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-KSI 60 + LRL+ + + +++ + + + + + ++ Sbjct: 10 QELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIK-KSKAYDKINTICSIETA 68 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + + +I E YP L DYP L G++ L +A+VGSR S Sbjct: 69 EQEIENTYKIGGRIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSI 128 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G+ + LA G TI SGLA+GID AH + + +IA++GNG+N ++P + Sbjct: 129 NGKNFAYKLSYELANSGFTIVSGLAKGIDKSAH-SIIFKQLPTIAIMGNGINIVYPEENT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + GG + +EFP P A FP+RNRIISGLS GV++VEA+++SGSL+TA A Sbjct: 188 TLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGSLITANFA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFY 299 + Q REVFA+PG + +G ++LIK G A L+ +I+E+LQF + Sbjct: 248 IHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNI 307 Query: 300 SPDQQDVALPFPE---LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + Q +L ++ ++ + + + L+ELE + I +P Sbjct: 308 ITNYQSTTEIDNAKNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERLPN 367 Query: 357 GYVRL 361 V L Sbjct: 368 NKVML 372 >UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular organisms RepID=A1TWN3_MARAV Length = 405 Score = 337 bits (864), Expect = 4e-91, Method: Composition-based stats. Identities = 136/383 (35%), Positives = 187/383 (48%), Gaps = 21/383 (5%) Query: 1 MVDTEI-------WLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQ 50 M D E WL L + RI V + I A L+ GL + Sbjct: 17 MSDQEFLQTPAGQWLLLSLLPRFGIPLRERILGSVDTLTDILPLNAATLRAMGLGGDAVE 76 Query: 51 RFLSFPR--------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 +++ + ++ YP L + P L+ G + Sbjct: 77 AIVAWQAGELSQGVIARALDIYRQCRERGIGVLGQGQAPYPECLRHIHNAPLVLYTLGNV 136 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L QL VVGSR + G R F L+ RG+ ITSGLA GIDG AH AL Sbjct: 137 ELLQRDQLGVVGSRNATRAGLDHARQFSAELSRRGLLITSGLALGIDGAAHAGALDAGYP 196 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AV+G GL+ ++P +H LA ++E G +VSE+P A FP+RNRIISGL++GV Sbjct: 197 TLAVVGCGLDRLYPAQHRNLAHRIIE-NGLIVSEYPPGTQARAAYFPQRNRIISGLARGV 255 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVEA+LRSGSL+TAR ALEQGREVFA+PG + +P + G H LI+QGA LV +++E Sbjct: 256 LVVEASLRSGSLITARTALEQGREVFAIPGSVHSPVARGCHQLIRQGARLVETANDVMEE 315 Query: 283 LQ--FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + P PE + S D + + +G + D + G P +++ Sbjct: 316 LGTWWSMQAQPAEPEATENSSDLSFLDSREIAVFEALGYDPQSTDALGLATGLPADQLLQ 375 Query: 341 QLLELELAGWIAAVPGGYVRLRR 363 LL LEL G A PGGY R R Sbjct: 376 SLLILELEGLAHACPGGYQRTGR 398 >UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLV8_9FIRM Length = 364 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 192/368 (52%), Gaps = 12/368 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWV--AKQSHIDAVV---LQQTGLTLRQ-AQRFLS 54 M + + L L + + + + I + ++ L + ++ + Sbjct: 1 MRNEDALLFLSYL-NFDYKIKDELLNHFTLEHIEEIFDLSGDYFKENKLLTKNNIEKLVE 59 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 K + ++ +LE+ + + SE YP L P ++ +G++ F L++V Sbjct: 60 EREKFNSDAYRDYLEKKKVNYVSILSENYPINLKDIEYIPQVIYYKGDILPEDEFALSIV 119 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG F +++ G+ I SG+A GID ++H+AAL+ G +IAVLG G++ Sbjct: 120 GSRKCTNYGAWATEYFARSISELGIRIVSGMALGIDSISHRAALKSGGRTIAVLGCGVDI 179 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P+ + RL ++E GA++SEFP+ +PPLA+NFP RNRIISGLSK +LV+EA RSG+ Sbjct: 180 AYPKTNYRLYDEIIE-NGAVMSEFPIGMPPLAHNFPVRNRIISGLSKALLVIEAQDRSGT 238 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+T+R A EQ +E+FALPG I + S G + LIK GA++ T+ ++I++ + + Sbjct: 239 LITSRFANEQSKEIFALPGNINSLYSRGTNKLIKDGALIATDYQDIID---GVIDFSEFI 295 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + + + +E + ++ G + E T L LEL G+I Sbjct: 296 LNKNKEEKDLDILDAKELLIYNLINEEPKSQNKISTITGFSIIETNTILTALELKGFIKE 355 Query: 354 VPGGYVRL 361 + GG + Sbjct: 356 LNGGIFVV 363 >UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rhodobacterales RepID=Q1GE46_SILST Length = 382 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 12/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ + R+ ++ + + + + + + + +++ Sbjct: 19 DQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKI--YSKDALD 76 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + N L+ YP L + + P AL+ G L + +A+VG+R S Sbjct: 77 AEFENAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSL 136 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGID AH+ AL +IAV G G++ I+P + Sbjct: 137 GRRMAYGLARDLGDAGYVVVSGLARGIDACAHEGALASG--TIAVQGGGVDIIYPSENTP 194 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA +L EQ G +SE P+ + P A +FP RNRII+GL+ +VVEAA++SGSL+TAR AL Sbjct: 195 LAMTLAEQ-GLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAAIKSGSLITARDAL 253 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + + G + LI+ GA LV E+++E L P + P Sbjct: 254 DLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLP 313 Query: 302 DQQDV-------ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 A ++L + TP + + G P +V T L +LEL+G I Sbjct: 314 SPPPERRNLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGRE 373 Query: 355 PGGYVRLRR 363 PGG + +R Sbjct: 374 PGGVIIKKR 382 >UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L8_DESDG Length = 425 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 132/409 (32%), Positives = 174/409 (42%), Gaps = 52/409 (12%) Query: 1 MVD---TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFL 53 M + W L L + R+ W D G+ +A Sbjct: 16 MDEAGRRNFWASLALRYSCGIGPRTWKRLLTWYGSPYAAVMDVADWAAAGVPATRADSCR 75 Query: 54 S-FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 R+ + + + ++ + YP +L D P L+ G+ L + + V Sbjct: 76 RGLWREQARAEWDAAGKAGYKILLWNDPRYPERLKEIPDPPLFLYYLGDASLLSAPMVGV 135 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG L+ RG+TI SGLARGID AH AAL+ G S+AVLGNG + Sbjct: 136 VGARRCSRYGLDVAACISRELSRRGITIASGLARGIDRQAHIAALEGIGSSVAVLGNGPD 195 Query: 173 TIHPRRHAR-LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 I+P + L + L G +V+EF VPP + NFP RNRIISGLS G+LVVEAA RS Sbjct: 196 QIYPPENRDVLFS--LAGRGLVVTEFAPGVPPESKNFPVRNRIISGLSLGILVVEAAARS 253 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TAR ALEQGREVFA+PG I S G H LIKQGA V E+IL L L Sbjct: 254 GSLITARLALEQGREVFAVPGRITAQTSSGCHELIKQGARTVCGAEDILLELAPLLRAAA 313 Query: 292 DAPENSF----------------------------------------YSPDQQDVALPFP 311 + P + P Sbjct: 314 EKPSSPAVQEPMHPHTAHSVPQSAGACCHSDVPSVVAAAPADGGAAGTEPATSPADADGQ 373 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++LA + +DV+ V LL LE+AG + PG Sbjct: 374 KVLAVLARRGGLHIDVLCRELDWDAGRVSAALLLLEIAGSVRQAPGMLY 422 >UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=Q1N3W6_9GAMM Length = 391 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 138/371 (37%), Positives = 199/371 (53%), Gaps = 18/371 (4%) Query: 7 WLRLMSISSLYGDDMVRI--AHWVAKQSHIDAVVLQQTGLTLRQAQRF----LSFPRKSI 60 +L L I + + I A + D +Q G++L++ Q + K++ Sbjct: 15 YLALSCIKGIGIQTLSLIHCADGLDYVHQWDEQAFRQLGISLKRTQLLMDGLRNPFSKTL 74 Query: 61 ESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 E +L W + NHH++ SE YP +L P L V+G+L +L + Q+A+VGSR S Sbjct: 75 EQTLDWQQSADNHHIVTPVSEAYPDRLGHIATPPTMLMVKGQLDSLLAAQVAIVGSRHPS 134 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G F LA GV +TSGLARGID AH+ AL + +IAVLG+GLN I+P+ + Sbjct: 135 FQGRHEAYEFAVGLANSGVVVTSGLARGIDTQAHQGALDADAATIAVLGSGLNHIYPKEN 194 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A LA + Q GALVSEF L P A +FP+RNRI+SGLS GVLV+EA L SGSL+TAR Sbjct: 195 AELAEQIC-QKGALVSEFALHTRPSAGHFPKRNRIVSGLSLGVLVIEAHLMSGSLITARQ 253 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ----------FGLHW 289 ALEQ REVFA+PG + N G H+LI+QGA LV P++IL +LQ L Sbjct: 254 ALEQNREVFAIPGNLSNVQKSGCHYLIRQGATLVESPDQILLDLQGQIRQTQNITLMLAN 313 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + + ++ + ++ + + G V ++ LL++EL Sbjct: 314 DSHNSKPKVSREIPEGMQPEHYQVYRFLDQGGVGMEQLIQHTGLSVSKLNELLLDMELNM 373 Query: 350 WIAAVPGGYVR 360 W+ G + R Sbjct: 374 WVTNEQGLFFR 384 >UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus RepID=C7RDQ0_ANAPD Length = 363 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 12/365 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-GLTLRQAQRFL-SFPRKS 59 EI L L I L ++ + LT + + + ++ Sbjct: 6 TKNEIILYLNYIY-LNNQTILDLYEK-TSFEDFFDKDRAYYDFLTDKIYGKIFDNESLEA 63 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE-LHALHSFQLAVVGSRAH 118 S L L + ++ + E YP LL D P L+ +G+ +A VGSR Sbjct: 64 FRSYLDLLYEKDYKYVTLLDEAYPKNLLYIEDKPAVLYYKGDFDEEADKNSIAFVGSRKC 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + E++A G+T SGLA GID HKA L V +I V+G G++ I+P++ Sbjct: 124 TDYGRWACKNLAESIAMAGITTVSGLAYGIDATCHKATLDVGKRTIGVIGCGIDKIYPKQ 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ G ++SEFPL P+A+NFPRRNRIISG+S G +V+EA +SG+++T R Sbjct: 184 NRDLYRRI-EENGLILSEFPLGTEPIAFNFPRRNRIISGISLGTVVIEAKEKSGTMITVR 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 CALEQG+EVFA+PG I + S+G + +I++GA LV PE+I+E L + Sbjct: 243 CALEQGKEVFAVPGNINSIYSKGTNKMIQEGAKLVLSPEDIIEELDYMKDLDLGRR---- 298 Query: 299 YSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S D + +++ + + + D +A + + + L LEL +I + Sbjct: 299 -SLDYSKLDKTEAQVVRYIVNYPNSSADTIASGLDEEIDVINFLLTSLELKDYIENIGNN 357 Query: 358 YVRLR 362 ++ Sbjct: 358 EFSIK 362 >UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium difficile RepID=Q18BD7_CLOD6 Length = 369 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + +L L SI + + I + + I ++ ++L + + + Sbjct: 4 MEKRDTYLWLKSIGGITTKTIEIIENEIVNIEDIFDFSEKEIYNLKNISLNIRKNIVKYR 63 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +E+ L + I + YP L + P LF +G++ +++ +A+VG Sbjct: 64 GHAYLENIKELLYKKAIKYICKYDKEYPENLKNIYNAPKLLFYKGDIGLVNNNFNIAIVG 123 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ GV I SGLA GID +H + +IAVLG+G++ Sbjct: 124 SRKPTAYGINCAKTISCQLSQYGVNIVSGLAIGIDAYSHIGCMSGKSKTIAVLGSGVDNP 183 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+++ L+ +LE GG L+SE+ ++ Y+F RNRIISGLS GV+VVEAA++SG+L Sbjct: 184 LPKQNLHLSNKILENGGLLLSEYNINSTVAPYHFSNRNRIISGLSDGVVVVEAAIKSGAL 243 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T ALE G+ VFA+PG I + S G H +IK+GA L+ ++IL Sbjct: 244 ITVDFALEHGKNVFAIPGNINSQMSRGCHKIIKEGAKLIENIDDILNEYNIF----NIID 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + +++ + E +D + + G + V + + EL L + Sbjct: 300 KKINQKYDNISLNAKSKQIIEAIKREGNLHIDSICDYTGIEIKYVNSIINELVLNELVVE 359 Query: 354 VPGGYVRLR 362 + L Sbjct: 360 MNNKTYSLN 368 >UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteobacteria RepID=Q0ANX9_MARMM Length = 387 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 183/384 (47%), Gaps = 25/384 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WLRL L R + + + R+ +++E Sbjct: 9 TERVMWLRLARTRGLGAIGFARAIAHYGNAADAIDDLPARARSAGRRVLDI--PSPETVE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + +E+ LI YP L A P L V G L L A+VG+R S Sbjct: 67 AEMEQIERVGARLITGLDPDYPALLAAIPGPPPTLIVRGNLSLLDRPACAMVGARNASAV 126 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R+ R L + + SGLARGIDG AH AL+ +IAVL G++ I+P H Sbjct: 127 GLRFARELANGLGREDIVVVSGLARGIDGAAHSGALESG--TIAVLAGGIDHIYPPEHGE 184 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L A L E G L+SE PL P A +FPRRNR+ISGL+ G LVVEAALRSGSL+TAR A Sbjct: 185 LHARLGE-DGLLLSEVPLGQSPTARDFPRRNRLISGLALGTLVVEAALRSGSLITARYAA 243 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------QFGLHWLPD 292 EQGREV A+PG +P + G + L++ GA L+ +++L+ L GL LP Sbjct: 244 EQGREVMAVPGSPLDPRARGSNQLLRDGAHLIESVDDVLDILSKARRPEPPGHGLEDLPA 303 Query: 293 APENSFYSPDQQDVALPF-----------PELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ ++ L A + D +A A P+ EV Sbjct: 304 MSLPDLFDDEEAGLSTDEGLSNTSALSPLERLRALLSPAPVSGDELARAADLPIGEVQAM 363 Query: 342 LLELELAGWIAAVPGGYVRLRRAC 365 L+E+E++G IA +P G V+ RR Sbjct: 364 LMEMEMSGEIATLPDGLVQRRRQS 387 >UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydrogenibium RepID=C1DXS3_SULAA Length = 356 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 16/366 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-- 56 M + L L I L + ++ + + + A+ + Sbjct: 1 MEEILSCLELYFIKGLGNVSIKKLIEHYSTATSVLNADFNDLKENFGENIAKLITNRDTS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E+ ++P + YP L D P ++++G + + +AVVGS Sbjct: 61 LKEKALKEYEKAEKLGVKIVPLSYQDYPFLLKNIPDPPPVIYIKG-IFPIPENTVAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS YG LA GV I SG+A GID +AHK AL+ + AVLG+G++ ++ Sbjct: 120 RKHSSYGVYVVNSIVRELAKSGVNIVSGMALGIDTIAHKVALEEGSFTTAVLGSGIDVVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L + E G ++SEFP+ P +Y FP+RNR I+GLS GV ++EA +SGSL+ Sbjct: 180 PFENRKLYDKITE-NGCVISEFPIGTKPSSYTFPQRNRSIAGLSYGVFIIEAPDKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA E GR VF +P I ++G + LIK+GAI +TE +++ E L F + Sbjct: 239 TANYGNEYGRLVFTVPANINLSTAKGNNSLIKEGAIAITEFKDLKEFLPFL--------K 290 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +S D+ E+L + + D + E+ P++ + L L+L I + Sbjct: 291 SSVNIDYLSDLTEQEKEVLMFLDSK-KYYDEILEKFSNKYPDIDSILFNLQLKNLIQSDS 349 Query: 356 GGYVRL 361 Y R+ Sbjct: 350 MFYYRV 355 >UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJT8_ALKMQ Length = 378 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 166/374 (44%), Gaps = 21/374 (5%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 W+ L + + R+ ++ I ++ G+ A+ + K Sbjct: 2 LYWIWLSEVKGIGPVMQKRLLAYLQSPKAIYTASSEELMNVPGIGCHLAEEITTSSLKRA 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + L N L+ E YP + P L+ G L +S + +VG+R S Sbjct: 62 QEILGMCNGLNIQLLTFHDERYPSRAKEYPLCPILLYYRGHL-VENSIGVGIVGARRCSS 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ + + LA + + SG+A+GIDG AH + L+ G ++A LG+G++ +P+ H Sbjct: 121 YGKEIAKQAGQYLAQNNIPVISGMAKGIDGYAHISCLKAGGYTLAFLGSGVDICYPKEHD 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L A ++E GA++S++P + P FP+RN +IS S+ +LVVEA +SG+L+TA+ Sbjct: 181 ELMARIMES-GAVLSQYPPETKPKPQYFPKRNALISAWSEKILVVEAGAKSGALITAQYT 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN---------------LQF 285 + REV A+P I + +G + LIK+GA + PE+++ L+ Sbjct: 240 KQLKREVLAVPNQIYSQMGKGTNQLIKEGATIYLGPEQLINTEPVMNVEAKIIGDNGLKP 299 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + Q ++ + + + E ++ + L Sbjct: 300 VKGNKKRKAMEAMKIASPQVNTPTEQRVIDALFGTPKTMAQIVEETKLQQLVLLEVMTIL 359 Query: 346 ELAGWIAAVPGGYV 359 EL G I+++PGG Sbjct: 360 ELEGKISSLPGGKW 373 >UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Comamonadaceae RepID=Q21RP2_RHOFD Length = 409 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 124/403 (30%), Positives = 188/403 (46%), Gaps = 44/403 (10%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL S + + ++ + + ++ RQA + P + Sbjct: 4 DELAAWLRLTLSSGVGNEAARKLLVAFGLPAKVFEQSSSTLQQVVSARQATALRAEPPEL 63 Query: 60 I---ESSLCWLEQPNH-----HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF--- 108 E + WL ++ YP LL D P L++ G + + Sbjct: 64 APLLEQTWAWLRDTGVGSGRRQIVVLGDANYPQSLLNIEDPPLMLYLLGAGEFMSNQAVA 123 Query: 109 ----------------------QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 +AVVGSR + G R F + L G+T+ SGLA Sbjct: 124 TANKGQAATTSVVNKLALRLANSIAVVGSRNPTPQGAVNARQFAKALGLAGLTVVSGLAL 183 Query: 147 GIDGVAHKAALQVNGV------SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 G+DG AH+ AL ++AV+G GL+ ++P+RH LA + Q G L+SE+PL Sbjct: 184 GVDGAAHEGALDSLAPGSDRLATVAVVGTGLDRVYPKRHLALAHRI-AQNGLLISEYPLG 242 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 PPL NFP+RNR+I+GL++ LV+EAAL+SGSL+TAR + EQG++VFA+PG I + + Sbjct: 243 TPPLPANFPKRNRLIAGLAQATLVIEAALKSGSLITARLSAEQGKDVFAIPGSIHSTQAR 302 Query: 261 GPHWLIKQGAILVTEPEEILENLQFG--LHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G H LIKQGA LV +++LE ++ L D+ S LL +G Sbjct: 303 GCHALIKQGAKLVESAQDVLEEMRIDSGLTHALDSIAVDACSTGATGSFGTQAVLLDAIG 362 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +D + R G + QL+ LEL G + +PGG + Sbjct: 363 FDPVGLDALQARCGIDTAGLQAQLMTLELDGLLVRLPGGLFQR 405 >UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11V51_CYTH3 Length = 364 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFP 56 M + + + I + + + I + G+ S Sbjct: 1 MQEKIYQVAVGLIPGVGAATTKTLISYCGCAEQIFKTPKGKLKNIPGIGAVTVDNIYSAS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ES + ++ + L+ YP +L D P L+ +G +A+VG+ Sbjct: 61 VLHEAESIVERAQKLDTQLLFYTDPDYPNRLKQIPDAPTLLYYKGSSALNPPKSIAIVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R E +A+ + SGLA GID AH+ AL++ +I V+ NG N I+ Sbjct: 121 RKATEYGRSVVRKLLEEIASYKPLVVSGLAYGIDIQAHRDALELGLETIGVMANGTNIIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H A +LEQGG L SE+ D FP RNRII+G++ +V+EA G+L+ Sbjct: 181 PSVHKNTALKMLEQGGLL-SEYTFDSIAEPMRFPARNRIIAGMTDATIVIEATQSGGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAP 294 TA A REV A+PG I + SEG + LIKQ A +T +++E L + + A Sbjct: 240 TAEIADSYDREVLAVPGRITDMASEGCNNLIKQNKAHALTSAADLIELLNWDITPSQQAH 299 Query: 295 ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 ++ + ++D + A + +E +D ++ ++ + ++ + LLE+E G + A Sbjct: 300 KHIILADLEED----ELMIYAVLTDNEGIHIDELSWKSQLSMQKISSVLLEMEFKGIVKA 355 Query: 354 VPGGYVRLR 362 +PG LR Sbjct: 356 LPGKKFSLR 364 >UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR3_UNCTG Length = 364 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 110/371 (29%), Positives = 177/371 (47%), Gaps = 15/371 (4%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF 55 M + E+ +L+S + + R+ I + G+ A + Sbjct: 1 MNERELSLFKLLSATDIGAIRFFRLLDKFGDTELILKASKRDLMSVEGIGQAIADTIFNS 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 E L + N + + YP L D P L+++G + +++VG Sbjct: 61 SDSGKAEKELETAIKNNIKITFYYNSDYPKPLRDFADKPLILYIKGNILEKDFDSISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S YG+ F A +G+TI SGLARG+D AH AL+ +IAVLGNGL Sbjct: 121 SRRISNYGKTVTSEFASYFAKKGITIVSGLARGVDSQAHITALENKSRTIAVLGNGLLVN 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P +A+L + Q GA++SE L P FPRRNRII+G S+ L+ EAAL+SG+L Sbjct: 181 YPPENAKLQEKI-SQCGAVISELQLRKQPDRGTFPRRNRIIAGFSRATLLTEAALKSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR E G++VFA+PG I + S+G + LI+ GA + P ++ + L++ + Sbjct: 240 ITARFCAEYGKDVFAVPGSIYSSISKGTNELIQNGAFIALGPHDMADQLKW------TSK 293 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEV--TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + E+L+ + ++ P D++A++ + E LL+LE+ G I Sbjct: 294 DKISKTNKLPSLDKLELEVLSLIENDSAGLPPDLIAQKLNIGISETAPVLLKLEINGLIK 353 Query: 353 AVPGGYVRLRR 363 PG Sbjct: 354 TTPGQIYVRAY 364 >UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandensis MED297 RepID=A4BK91_9GAMM Length = 368 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 188/365 (51%), Gaps = 15/365 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------ 56 D WLR + I +L ++ + + + + L Sbjct: 4 DELAWLRWVLIPNLGLKRSHQLLNLIDSPQALFLTPDRWP-LPESVRATIREMNLLGEQH 62 Query: 57 --RKSIESSLCWLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + L W +Q + HHL+ D P L D P L+V+GE L+ Q+ +V Sbjct: 63 PVHRRALEQLSWRDQHDSHHLLFPDHPDMPTSLSELYDAPLVLWVKGERSVLNQTQVGLV 122 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR S R R + L+ G+ +TSG A+GID H A + +G ++AVLG G++ Sbjct: 123 GSRHASPNALRHARTLSQHLSAAGLVVTSGGAKGIDTACHTAVVSRHGATVAVLGCGIDV 182 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P+ + +L + + G LVSE+PL P +FPRRNR+IS LS V V+EA+ +SGS Sbjct: 183 IYPKNNRQLFEDI-ARDGCLVSEYPLGTTPRPGHFPRRNRLISALSTVVGVIEASPKSGS 241 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA ALEQGR+VFA+PG IGNP S G H LI++GA L+ ++IL++L + + Sbjct: 242 LITAMHALEQGRDVFAMPGDIGNPNSAGCHQLIQEGASLLCSADDILKHLDWR----NSS 297 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 +S +D+ +L + + P+D++A P +++ +LELEL G I Sbjct: 298 APSSSSRLTLEDLTPVQHSILETLSSDQHPLDMLAYHLQVPAHQLLEPVLELELRGLIEQ 357 Query: 354 VPGGY 358 PGGY Sbjct: 358 QPGGY 362 >UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BIU6_9BACT Length = 365 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 13/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E L L S+ + + R+ I Q G+ + S+ Sbjct: 1 MNRLEACLLLESLPGMGWNRAQRMVTHFGSPEAIFLAKHQDWESVEGIGEKGCNALKSWK 60 Query: 57 R--KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + S E ++ + + YP L D P LF +G L F +++VG Sbjct: 61 KGLLSAEKKAREIKTLGIQCLFFGTPEYPLALSFCADAPLVLFYKGTLSFQDRFIVSIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R ++ +G + TLA I SGLARGID +AH+AAL+ N ++A L + + I Sbjct: 121 TRQNTPHGRAFCEELIHTLAPFNPIICSGLARGIDIIAHRAALKANLDTVACLAHSFDRI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A+ + E+ GALV++F NFPRRNR+I+G++ +V+E+A++ GS+ Sbjct: 181 YPYEHHKTASEI-EKKGALVTDFLPGAVFNRANFPRRNRLIAGMAHATVVIESAVKGGSM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 TA A + GRE+FA+PG + S G H L+ +Q A L+T+P+EI+ L + Sbjct: 240 NTADLAHQYGRELFAVPGRPSDLKSGGCHQLLFQQKAQLLTDPQEIVNTLGWN----KQV 295 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + P D+ +L E +D +A G V + L+++E+ G + Sbjct: 296 VTKAIQKPLFVDLTEEERQLFTQFSKEGKIHLDHLAFSVGIKVSTTASLLMQMEMKGMVR 355 Query: 353 AVPGGYV 359 A+PG Y Sbjct: 356 ALPGKYF 362 >UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB69_CARHZ Length = 358 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 190/365 (52%), Gaps = 12/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M +++ +L L S+ Y + + I L++ G + + Sbjct: 1 MQNSDYYLTLASVY--YNQKLFHLIKEGIPVEEIVVNPVKTLKEFGFSPTEINSLTRKIS 58 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + E ++ + YP +LL D P LF G L L + + +VG+R Sbjct: 59 EFNPERVKEHCSNLGIKIVTFGEKRYPERLLHLYDPPVVLFCWGNLELLKTPMVGIVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R F E +A G+T+ SGLARGIDG AH+ A+ G ++AVLG+G++ +P Sbjct: 119 RASSYGLKVARAFAEEIAGAGITVISGLARGIDGEAHRGAVSA-GATVAVLGSGIDVPYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF PL Y FP RNR+I+ L++G++VVEAAL+SGSL+T Sbjct: 178 RENENLYREII-QKGLIISEFLPGTMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALE GREVFA+PG I +P S G + L+K GA + + E++E L FG + + Sbjct: 237 ARIALELGREVFAVPGMITSPLSAGSNLLLKDGARIALKGTEVIEELGFGTLFSN----S 292 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 +Q+ ++L + +E V+ +A R V EV+ ++ LE+ G++ G Sbjct: 293 FAAQRSKQEAFGLAGKILEVLVNEDLTVEEIAYRLNARVSEVLREISFLEIKGFVKKQFG 352 Query: 357 GYVRL 361 G Sbjct: 353 GKFTR 357 >UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 Length = 398 Score = 330 bits (846), Expect = 5e-89, Method: Composition-based stats. Identities = 124/395 (31%), Positives = 179/395 (45%), Gaps = 33/395 (8%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + E WL+L + + + + + + +Q +R ++ Sbjct: 4 MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQVAPAVRHKHALEAWRNA 63 Query: 59 S--------IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL 110 E++L W + L+ E +P L P LF+ G + LH Sbjct: 64 EKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSA 123 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VGSR + R + F L +G+ SG+A GID AH+ AL+ G +IAV G G Sbjct: 124 AIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDTAAHQGALEAEGGTIAVWGTG 183 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ I+P + LA + E+ G +VSEFP+ P A NFPRRNR+I+ LS+ LVVEAAL Sbjct: 184 IDRIYPPANKNLAYEIAEK-GLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALE 242 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SGSL+TA A E GREV A+PG I NP S+G H LIK GA L ++IL L Sbjct: 243 SGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQNT 302 Query: 291 PDAPENSFYSPDQQDVALPFPEL----------------------LANVGDEVTPVDVVA 328 + + L +G + DV+A Sbjct: 303 GASSYSINKDTPDTGRRTVQTAYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDVLA 362 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + P ++ LLELEL G +AA+PGG + R Sbjct: 363 GQLAMPAADLYAALLELELDGSVAAMPGGRYQRIR 397 >UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SZ78_9FIRM Length = 360 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 181/368 (49%), Gaps = 14/368 (3%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLSFPR 57 M+D E+ L ++ + + +A + + Q LT +Q + + Sbjct: 1 MIDDELLYLWYGMMNRMVHTQKIELAFRFGGIRGLWETSEKVLQESLTKKQFEMVMENRT 60 Query: 58 KSIESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVG 114 + LE + + + YP +L D P LF G+++ L +AVVG Sbjct: 61 EHAVLEYRNRLEAGHITYVYPGHDCYPGKLYDIPDPPMLLFAAGDINVLKDMAPAVAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG ++ GVTI SG+A GIDG AH+AAL G ++AVLG+G+N Sbjct: 121 ARKASVYGRTMADRISADVSAAGVTIVSGMALGIDGTAHRAALSGGGKTVAVLGSGINVP 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + + S++ GG +VSE LDV P A+ FP RNRIISG+S GVLVVEA +SGSL Sbjct: 181 YPRENYDIYRSIVNGGGVVVSESGLDVAPEAFRFPYRNRIISGMSDGVLVVEAREKSGSL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGR+V+A+PG + + GS G + LIK GA+ VT E+ILE L Sbjct: 241 ITADQALEQGRDVYAVPGRVTDTGSAGCNNLIKMGAMCVTSSEDILEELGIQTVKGQFLN 300 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + A ++ + V E +D + AG V E L ELE + + Sbjct: 301 KKLL--------APAEKKVYSCVRLESRHIDDICFEAGMTVSETAQILFELEKKRLVKQL 352 Query: 355 PGGYVRLR 362 Y Sbjct: 353 VRNYYCRA 360 >UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacteria RepID=B2U799_RALPJ Length = 402 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 133/376 (35%), Positives = 193/376 (51%), Gaps = 17/376 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL + ++ I A L RQA+ L+ P + Sbjct: 26 TELAGWLRLTETPGVGPVAARQLLAAFGLPQDIFAQPYAALAKVLPERQARAVLAEPDDT 85 Query: 60 IESSLC----WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + W+ +P + + YPP+LL D P L+ +G+ L + + VVG+ Sbjct: 86 LAALIECTVAWVNEPGNAIFTLADRGYPPRLLELPDPPTLLYTKGDASLLRAAAVGVVGA 145 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + G R F + L+ VT+ SGLA GID AH+ AL G +IAV+G GL+ ++ Sbjct: 146 RSATAAGIDNARAFSQALSAASVTVVSGLALGIDAAAHEGALAGPGSTIAVVGTGLDIVY 205 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ LA + E G ++SE+PL + A NFPRRNR+ISGL++G+LVVEAA +SGSL+ Sbjct: 206 PARNRALAHRIAEA-GVIISEYPLGMGARAENFPRRNRLISGLARGLLVVEAAAQSGSLI 264 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A EQGR+VFA+PG I +P ++G H LIKQGA LV +IL+ L +G P Sbjct: 265 TARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWGRAAAPAKRA 324 Query: 296 NSFYSPDQ----------QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + LL +G + +D + ER GQ + QLL L Sbjct: 325 TRAATAQAPAGAPVTVAGPAPSASEAALLDALGFDPVDLDTLCERTGQGAAALSAQLLAL 384 Query: 346 ELAGWIAAVPGGYVRL 361 EL G + PGG Sbjct: 385 ELDGRVERRPGGRFLR 400 >UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacteria RepID=Q48QH9_PSE14 Length = 372 Score = 329 bits (845), Expect = 7e-89, Method: Composition-based stats. Identities = 149/365 (40%), Positives = 196/365 (53%), Gaps = 9/365 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFP-RK 58 + E LR+ + + R+ S + + G+ A+ + R Sbjct: 13 ELEARLRMHRLPEIGPKRFSRLIEAFGSASSALSAPASAWRALGIPGACAEARRAPSVRD 72 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++L WLE P HL+ D YP L D P +F+ G+ L QL +VGSR Sbjct: 73 GASAALAWLECPAQHLLMWDDPCYPALLAEIADPPPLIFIAGDPSILERPQLGMVGSRRA 132 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R F +LA G ITSGLARGIDG AH+ AL V G +I VLG L ++P++ Sbjct: 133 SRPGLDTARAFARSLAGAGFVITSGLARGIDGAAHQGALDVGGHTIGVLGTRLEKLYPQQ 192 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LAA + QGGA++SEFPLD P NFPRRNRIISGLS GVLVVEA++ SGSL+TAR Sbjct: 193 HRALAAQMAAQGGAVISEFPLDAEPQPSNFPRRNRIISGLSLGVLVVEASVASGSLITAR 252 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A EQGREV+A+PG I +PG++G H LI+ GA LV E ILE LQ P AP + Sbjct: 253 LAAEQGREVYAIPGSIHHPGAKGCHQLIRDGATLVETVEHILEGLQHWKSVAPAAPPETP 312 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 P D L LA + + ++ +G P+P+V+ L ELEL G I+ G + Sbjct: 313 AKPVPCDHPL-----LALLHAAPHTSEGLSVSSGWPLPKVLAGLTELELDGRISCEAGRW 367 Query: 359 VRLRR 363 Sbjct: 368 FARAP 372 >UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDM2_9FIRM Length = 359 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 178/365 (48%), Gaps = 10/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS-FPR 57 M + W S+ + +I V + + + L RQ + FL Sbjct: 1 MNEKLSWFWFTSLLEINRKTQGKILSAVLHPEELRKLNEETAKSFLNKRQYRLFLETRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I L++ I YP +L DYP +F +G +A+VG+R+ Sbjct: 61 SYICKKYEELKKQKTDYIIWKEPDYPQRLKQIYDYPFGIFRKGR-PRESRLVIAMVGARS 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F + L+ RGV I SG+ARGIDG +H+ AL + VLG G++ I+P+ Sbjct: 120 CTLYGREMAGYFAKELSGRGVLIVSGMARGIDGASHRGALDAGAPTAGVLGCGIDRIYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H +L A +E+ G + SE+ V P ++ FP+RNRIISGLS G+ VVEA +SGSL+TA Sbjct: 180 VHQKLFAD-VEKQGVIYSEYGPGVEPFSFLFPQRNRIISGLSDGIFVVEAREKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C LEQ +E+FALPG + + S G H LI+QGA LV+ PE+IL ++ Sbjct: 239 DCGLEQNKEIFALPGNVTSDVSRGCHRLIQQGAKLVSGPEDILNEFPKF-----RVFSHN 293 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 D+ +A + + E ++ +A A PV E VT L L+ G + Sbjct: 294 VCQFDKNSLARGEKMVYDVLSLEPKCLEQIASEARLPVTETVTSLYYLKRQGLAEEILKN 353 Query: 358 YVRLR 362 Y ++ Sbjct: 354 YYIIK 358 >UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q1F9_9GAMM Length = 409 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 130/398 (32%), Positives = 186/398 (46%), Gaps = 38/398 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFL-----SF 55 + L L + +L ++ Q GL +RF S Sbjct: 12 QQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASR 71 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + +L L Q + ++ + YP QL D P L +G L AL QLA+VGS Sbjct: 72 TSQFLHDTLLELSQGQYGVVFDNDPLYPTQLKNIYDPPPLLLYQGNLSALSQPQLAIVGS 131 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNG 170 R S + E+ + LA G+ ITSG+A GID AH AL G +IAVLGNG Sbjct: 132 RKPSPHAEKIAFDMAQYLAHEGLWITSGMAEGIDKQAHLGALSLQMTATQGGTIAVLGNG 191 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + +P+ HA L A ++ GG ++SE D+P Y+FPRRNR+++GLS LVVEAA + Sbjct: 192 IKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLSLATLVVEAAAK 251 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------- 283 SGSL+TAR A EQG++VFA+P I N ++G H LI++GA LV P +ILE+L Sbjct: 252 SGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPI 311 Query: 284 ------------------QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 L +P DVA LL + +D Sbjct: 312 VKATEVETAPIVAQAVSNSPQLPSESAQNTQPHQAPLAMDVAPHLQTLLNQLDWVGQDLD 371 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + ++ + ++ L+ELEL G + G Y+R R Sbjct: 372 SLVDKTRTDIATLMGWLIELELMGLVMQRGGLYMRCRP 409 >UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae RepID=Q3BNK4_XANC5 Length = 381 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 133/356 (37%), Positives = 191/356 (53%), Gaps = 18/356 (5%) Query: 22 VRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 ++ S + A + G QA +++E+ L W EQP HHLI Sbjct: 25 RKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQGPDPQALEAGLRWCEQPGHHLIGWC 84 Query: 79 SEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGV 138 YP L + P ALFV+G + L +AVVGSR+ + G R F +LA G+ Sbjct: 85 DPDYPALLRHIANPPMALFVDGAPNVLWHPGVAVVGSRSATAGGRDHTRAFASSLACAGL 144 Query: 139 TITSGLARGIDGVAHKAAL-QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +I SG+A G+D +AH+AAL Q +G+++AV+G G++ +P RH L + E+ GA+VSE+ Sbjct: 145 SIVSGMAAGVDAIAHEAALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAER-GAVVSEY 203 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 P+A +FP RNRII+GL+ G LVVEAA+RSG+L+TAR A E GREVFALPG + NP Sbjct: 204 LPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGALITARLAAEAGREVFALPGSLHNP 263 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD------------ 305 + G H LI+QGA L EP +++E L L A +P + Sbjct: 264 LARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRKRLAAPTELPSKATTSAGAGPA 323 Query: 306 -VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + L +G + TP+D + +R G V + + LL +EL G + G Y R Sbjct: 324 RSDPDYQRLWQALGHDPTPMDSLVQRTGLTVAALSSMLLIMELEGDVVTEHGRYTR 379 >UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga lettingae TMO RepID=A8F3X8_THELT Length = 339 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 113/362 (31%), Positives = 162/362 (44%), Gaps = 25/362 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EI L +++ +I S I Q + + I Sbjct: 1 MHPIEI-FALSYFGKFSIEEIQKIKETYNSVSEILKSDFFQGNERFK-----AHYDEGFI 54 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHS 119 + L +E N L+ SE YP L T P LF G + S +AVVG+R + Sbjct: 55 QQQLKKIENFNVKLVDFWSEDYPELLKWTHSPPAVLFCLGNIQFLKDSRTVAVVGTRKAT 114 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + L+ G SG+A GID AH AL V G ++AVLG G++ +P + Sbjct: 115 GYGIDVTKKMVTDLSRAGFVTVSGMAFGIDSSAHSTALNVGGKTVAVLGTGVDVCYPVSN 174 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + +L + G LVSE+PL NFP RNRII+GL + +VVEA L SG+L+TA+ Sbjct: 175 KDIYEVIL-KNGCLVSEYPLGTKAAKQNFPARNRIIAGLCRATVVVEAPLNSGALITAKI 233 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A E GR+VF++PG I SEG +WLIK GA +T ++I E + Sbjct: 234 AAEIGRDVFSVPGDIDRKTSEGCNWLIKMGATPLTHVDQIFEYYGVEFKKEELSDN---- 289 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ + VAER + EV+++L E EL G I+ G+ Sbjct: 290 -------------FISLFDSGPLLAEEVAERLKMDLSEVLSKLTEYELRGMISKTQSGHY 336 Query: 360 RL 361 Sbjct: 337 NR 338 >UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 Tax=Alcanivorax RepID=Q0VTD9_ALCBS Length = 353 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 183/362 (50%), Gaps = 13/362 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L L ++ S + R S + L L++ L ++ Sbjct: 1 MDGQFKRLLLQALFSPSSAALGRALKQHRSVSAAASDFLPLLPAGLKERASLLD-NTGNL 59 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ L I E YPP L D PG + V G + AL+S LA+VG+R S Sbjct: 60 QAYYEQLSGQGWRWIAFGDEDYPPLLAQIHDPPGVIAVRGNVEALNSPALAIVGARNASA 119 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G R F LA G I SGLA GID AH+ A+ G S+AV+GNG + I+P R+ Sbjct: 120 DGLDNSRRFARKLAASGFVIASGLALGIDAAAHRGAVSA-GRSVAVMGNGPDRIYPPRNG 178 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +++ GGALVSEF PL FP RNR+ISGLS +VVEAA++SGSL+TAR A Sbjct: 179 SLAEEIVDTGGALVSEFAPGARPLPAQFPMRNRVISGLSLATIVVEAAIKSGSLITARTA 238 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L Q REVFA+PG I NP S+G H L++ GA + ++I + + S Sbjct: 239 LAQNREVFAIPGSIHNPLSKGCHQLLRDGASWLESVDDIFQAFG-----------DFQRS 287 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + P LL + V +D + ER G PV + QL +LEL GW+ V GGY++ Sbjct: 288 VEAAGIHCEAPALLTQLTSGVNSLDALQERTGLPVAALAGQLADLELEGWVERVAGGYLK 347 Query: 361 LR 362 + Sbjct: 348 RQ 349 >UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=Alphaproteobacteria RepID=Q135I2_RHOPS Length = 422 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 172/364 (47%), Gaps = 8/364 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ ++ + + L + A+ Sbjct: 61 QRIDWLRLIRADNVGPRTFRSLVNHFGSARAALE-RLPELARRGGAARAGRIPSEDEARR 119 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG---ELHALHSFQLAVVGSRAHS 119 + + L+ YPP+L D P L V L + +A+VGSR S Sbjct: 120 EIDGGHRLGVELVAPGEPGYPPRLALIDDAPPLLGVHCVPDALAEMQRPMIAIVGSRNAS 179 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G ++ L G + SGLARG+D AH+A+L ++AVL G + I+P H Sbjct: 180 GAGLKFASELARDLGAAGFVVISGLARGVDQAAHRASLANG--TVAVLAGGHDKIYPPEH 237 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L ++E GA +SE PL P +FPRRNR+ISG + GV V+EAA RSGSL+TAR Sbjct: 238 EDLLLDIVEARGAAISEMPLGHVPRGKDFPRRNRLISGAAVGVAVIEAAYRSGSLITARR 297 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP--ENS 297 A +QGREVFA+PG +P + G + LIKQGA L+T ++I++ + + + P E Sbjct: 298 AADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSADDIIQAVAPIMDRPVELPGREPE 357 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +P + A ++ +G +D + +G P V T LLELELAG + GG Sbjct: 358 HPAPASEPDASHRGRIVNLLGPSPIGIDDLIRLSGIPPAVVRTVLLELELAGRLDRHGGG 417 Query: 358 YVRL 361 V L Sbjct: 418 LVSL 421 >UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2C9_9BACE Length = 408 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 103/400 (25%), Positives = 161/400 (40%), Gaps = 42/400 (10%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + W+ L + + R+ ++ GLT Q + L Sbjct: 1 MAALKYWIWLTTRRGMTPLQTFRLLDHFGTPEAAYFADRKEYRLCGLTDWQQRTLLDKSL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL-HALHSFQLAVVGSR 116 E L ++ ++ YP +L + P L+V+G+L + VVG+R Sbjct: 61 DGAERILGDCDRLGIRILTIQDAEYPERLRQIENPPCVLYVKGKLFPFDELVTVGVVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G + SG+ARG+D A + AL+ G ++VLG G++ ++P Sbjct: 121 RPTEYGKIMAGRLGMELARGGALVVSGIARGLDAAALRGALKGGGSVVSVLGGGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + GAL+SE+P +FP RNRIISGLS GV VEA SG+L+T Sbjct: 181 AENRWLYEDVAAA-GALISEYPPGTENKGEHFPIRNRIISGLSLGVAAVEAEEHSGTLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPE 295 R AL+QGR+ FA+PG P S G + LI++G A LV +IL + L PE Sbjct: 240 MRLALDQGRDAFAVPGNADAPMSRGTNLLIQRGEAKLVLSGWDILCEYEQLLPGRVSRPE 299 Query: 296 NSFYSPDQQ------------------------------------DVALPFPELLANVGD 319 + + ++L + Sbjct: 300 PLPVQVEAARLEVPEPPQEPERQETVTAETVDKPDEMAYITLEDGALTDDERDILLALEG 359 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 D + E P V + L L++ G++ G Sbjct: 360 RGLRTDDLVELTQIPARRVSSALTMLQIHGYVEEKAGRRF 399 >UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria RepID=A9BS71_DELAS Length = 405 Score = 327 bits (838), Expect = 4e-88, Method: Composition-based stats. Identities = 136/389 (34%), Positives = 195/389 (50%), Gaps = 30/389 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL+ + R+ +I + +T QA + P++ Sbjct: 14 EELSAWLRLLLTPGVGRTTARRLLAACGGAQNIWSGPPAAWHGLVTAAQAHSLQTVPQRL 73 Query: 60 ---IESSLCWLEQPN----HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF---- 108 + +++ WL+QP H ++ YP LL T D P L V+G + Sbjct: 74 EQLVAATVQWLDQPASGQLHAVLALGHPQYPQALLQTEDPPLLLHVQGSERCMTGPGPWF 133 Query: 109 ----QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS- 163 LA+VGSR + G R + LA G+ I SGLA+G+DG AH+ AL+ + Sbjct: 134 PYPQSLAMVGSRGPTVQGAANARAMAQALAEAGLCIVSGLAQGVDGAAHEGALRAVLRTG 193 Query: 164 -------IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 IAV+G GL+ ++PRRH LA + G +VSE+PL P+A +FP+RNRII+ Sbjct: 194 AQAAPVTIAVVGTGLDQVYPRRHIGLARE-VASHGLIVSEYPLGTGPMAAHFPQRNRIIA 252 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 GLS+G LVVEAAL+SGSL+TAR A EQGREVFA+PG I P S G H L++QGA LV Sbjct: 253 GLSQGTLVVEAALQSGSLITARLASEQGREVFAIPGSIHAPQSRGCHALLRQGAKLVETA 312 Query: 277 EEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPELLANVGDEVTPVDVVAERAG 332 +++L+ LQ LP A + Q L + + +D + +R G Sbjct: 313 QDVLDELQGTAVRLPIAKPVPAAAAAAAAVQSAQDHENDATLRALAHDPLSLDELMDRTG 372 Query: 333 QPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + LLELEL G + +PGG + Sbjct: 373 MDAAALQAHLLELELEGRVERLPGGLFQR 401 >UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD3_ALIAD Length = 366 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 106/372 (28%), Positives = 166/372 (44%), Gaps = 22/372 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M D E+ + L + R+ + G+ QA R ++ Sbjct: 1 MGDAELAIVWSLCPGLAPSTLRRLVRAFGGIRPFHEARVADWTAYGGVDAAQASRMDAWR 60 Query: 57 RKS--IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHALHSFQLAV 112 R + LE ++ +E YP +L D P +FV+G +L A + Sbjct: 61 RAEPSADRLKLQLEHRGIFVLARGAEDYPSRLSDLPDPPMVVFVQGRKDLLAPQRATFGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG R +A R I SGLA G+D AH A L++ G ++AVLG G++ Sbjct: 121 VGTRRMTSYGMEAARWIAGEIARRDAVIVSGLAMGVDATAHAATLEMGGDTVAVLGCGID 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P + RL + G LVSE+P P ++FP RNR+I+ LS+ V+VV+A RSG Sbjct: 181 RCYPPSNRRLYDQI-ASTGTLVSEYPPGTPVRKHHFPERNRLIAALSEAVIVVQAGDRSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA+CAL+ GR+V+A+PGPI + S G + L+ GAI + +P ++ Sbjct: 240 ALITAQCALDLGRDVYAVPGPITSRASRGVNRLLFDGAIPLVDPNDLFPE---------- 289 Query: 293 APENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + + +A A + V LLE+ELA + Sbjct: 290 --PADVEIAGSWKIPAHLEPCYRALARHQPIRAGELAAVADLDLGYVFGALLEMELACMV 347 Query: 352 AAVPGGYVRLRR 363 P G +R Sbjct: 348 TRHPDGTYHIRP 359 >UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacteria RepID=A9KH16_COXBN Length = 308 Score = 326 bits (837), Expect = 6e-88, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 178/298 (59%), Gaps = 10/298 (3%) Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W PNHH++ D YP L D P L++ G+ L+ Q A+VGSR + G Sbjct: 21 EWTTAPNHHILTLDHPSYPTLLKEIPDPPKKLYIMGDPLILNQPQFAIVGSRNPTVTGCE 80 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + E L G ITSGLA GID +H+ AL+ G +IAVLG+GL I+PRRH RLA Sbjct: 81 IAQEMAEKLVQAGFHITSGLALGIDAASHRVALKAGGQTIAVLGSGLTNIYPRRHHRLAE 140 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + Q GALVSEFPL +PPL NFPRRNRIISGLS G LVVEA L SGSL+TA+ A EQ Sbjct: 141 QI-SQKGALVSEFPLTMPPLPTNFPRRNRIISGLSLGTLVVEATLGSGSLITAKLAAEQN 199 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G H LIK+GA LV +I+ L + E + S Q Sbjct: 200 REVFAIPGSIRNPLSQGCHALIKEGAKLVDSIGDIIAELSY---------EATGASAPIQ 250 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +LL +G EVT +D + R+G V + LL +EL G+I + PGG +R++ Sbjct: 251 ALDKNEHKLLECIGFEVTSIDQLIARSGFSASIVASLLLRIELQGYIKSTPGGVIRVK 308 >UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepID=A5CDZ7_ORITB Length = 386 Score = 326 bits (837), Expect = 6e-88, Method: Composition-based stats. Identities = 108/369 (29%), Positives = 171/369 (46%), Gaps = 14/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL ++ + V L + + + Sbjct: 16 DETIYTLRLARSENVGPKTFFELIRLFGSAKIALQNVA-YFSLKGGKRKPIKIYTNSEAL 74 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L + N L+ Y LL D P + +G++ L+ LAVVGSR S Sbjct: 75 QEIEVLRKFNAFLLTHHHSEYSKLLLHIPDPPPVIIYKGDIKLLNHKILAVVGSRNASLN 134 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + + + L + I SGLARGID AH++AL +IAV+ G++ I+P+ + Sbjct: 135 GVTFTKNIVKKLVDNKIVIASGLARGIDTAAHQSALPS---TIAVIAGGVDHIYPQENIN 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +++E P+ PP++ +FP+RNRII+G+S G LVVEA L+SGSL+TAR L Sbjct: 192 LYHKI-ANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKSGSLITARLTL 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E RE+FA+PG +P +G + LIK GA LV + E+I+E L + + Sbjct: 251 EYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFT 310 Query: 302 DQQDVALPFPELL---------ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 +D + + ++V+ + P+ V +LELELAG +A Sbjct: 311 QYKDHGSYQSTTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVA 370 Query: 353 AVPGGYVRL 361 G + + Sbjct: 371 RCLGNKIVI 379 >UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=A9IU37_BART1 Length = 404 Score = 326 bits (836), Expect = 9e-88, Method: Composition-based stats. Identities = 117/379 (30%), Positives = 176/379 (46%), Gaps = 23/379 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ ++ + + + A + + A + E Sbjct: 17 QRLSWLRLLRSENIGAVSFRNLIDYYKTAENALAALP-ELSRKGGGAASLKIASLEDAEK 75 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + E+ I YP L T P + V+G + + ++GSR S G Sbjct: 76 EIQEAEKLGVRFIGMGEPDYPAFLKVTEARPPLIAVKGNVLIFQKTSVGIIGSRNASAAG 135 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ F L SGLARGID VAH+A+L+ ++AV+ G+N I+P + +L Sbjct: 136 KKLTAQFAHFLGEADFVTISGLARGIDSVAHQASLKTG--TVAVMAGGINHIYPPENKKL 193 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ GGA++SE P+ P A +FPRRNRII+ LS G+LVVEAALRSGSL+TAR A E Sbjct: 194 YEDIIANGGAIISEMPISWKPRAIDFPRRNRIIAALSLGLLVVEAALRSGSLITARQAAE 253 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-------- 294 GR +FA+PG +P S G + LIK GA+L T P +I+E L + LP++ Sbjct: 254 MGRLIFAIPGSPLDPRSVGTNNLIKDGALLTTHPSDIIETLTPLISPLPNSQLNFFEEPS 313 Query: 295 ------------ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 P +L+ + +D ++ +G +P + L Sbjct: 314 SLKIEKENFNSAYEKNAHPSLTGDDAARAAVLSALSTTPIDLDTLSIHSGVSLPTLYLLL 373 Query: 343 LELELAGWIAAVPGGYVRL 361 +ELELAG + GG V L Sbjct: 374 VELELAGKLIRHSGGCVSL 392 >UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I69_CLOAB Length = 354 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 106/367 (28%), Positives = 173/367 (47%), Gaps = 16/367 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M D ++W +L + + I Q++ F + I Sbjct: 1 MYDNDLWFA---TINLPYRQKLELLRIYKTSDEILYNFK-----NSELIQKY-KFDIEKI 51 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAH 118 +++ ++ + + YP L D P LF G + L+ +A+VGSR Sbjct: 52 NYIKDEMKKSGMKIVFWNDDDYPKVLKNYDDMPYGLFYMGNIKKLNELNYNVAIVGSRRC 111 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG+ + ++ G+ I SG+ARGID AHK L+ NG + AVLG G + I+P+ Sbjct: 112 TQYGKDITTIISREISINGIGIISGMARGIDTYAHKICLENNGYTCAVLGCGADVIYPKE 171 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ + G ++S++ + PL YNFP RN+IISGLS VLV EA ++SGS++TA Sbjct: 172 NKNLYCQII-RNGCIISQYKPNTKPLPYNFPIRNKIISGLSNLVLVTEADIKSGSIITAS 230 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V A+PG + + S G + LI+ GA ++ + +++ L F NS Sbjct: 231 SALEQGKDVGAVPGSVFSKMSRGTNKLIQDGAHVIKDIDDVFGILNFQKINFKKIRNNSS 290 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 YS ++ V D+ VD + + E+ L E++L I + G Y Sbjct: 291 YSSMP----ENQRQIYDLVSDKPIHVDDIKRCLNIDIQELYELLFEMQLKNKILCLSGSY 346 Query: 359 VRLRRAC 365 C Sbjct: 347 YVRVNDC 353 >UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular organisms RepID=A0KBJ9_BURCH Length = 475 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 125/396 (31%), Positives = 176/396 (44%), Gaps = 39/396 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR--FLSFPRKSIE 61 WL+L L + + + + A + R ++ Sbjct: 64 LRAWLQLAHAPGLSPAVLQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLD 123 Query: 62 ----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++L WL+ P + L+ YPP+L D P L+V+G L LH+ LAVVGSR Sbjct: 124 TRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPPLLYVKGRLDLLHARGLAVVGSRH 183 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G F L+ G+TI SGLA GIDG AH+ L ++AV+ G + ++P Sbjct: 184 ATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPA 243 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA + GA+VSE+PL P A +FP+RNR+I+ L+ G LVVEAA RSGSL+TA Sbjct: 244 RHRALAHEIAAH-GAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITA 302 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP------ 291 R A E GR+VFA+PG I P ++G H LI+ GA L P ++LE G Sbjct: 303 RLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAM 362 Query: 292 --------------------------DAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 A +L +G + Sbjct: 363 RAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAAPPGTPSEQAVLTALGYGPVTYE 422 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +AE +G + LL LELAG +A+V GG Sbjct: 423 WLAEHSGLSNDVLHGALLALELAGRVASVAGGRFAR 458 >UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiaceae RepID=B3EFC5_CHLL2 Length = 392 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 181/380 (47%), Gaps = 15/380 (3%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRF-------- 52 L L S+ L + I Q + L+ G+ A+ Sbjct: 12 LFLLTLASVPGLGPARINAIITRFGYQPDLLRASADVFLEVPGIGRSLAEEISGFLSGSK 71 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 ++ L++ L+ +P L D P LFV G +A+ Sbjct: 72 RREAEEASLRQYEELDRHQASLVTIFDPCFPALLKEIYDPPPFLFVRGSFSEPEPPSIAI 131 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG++ L LA+RG+ I SGLA GID AH+AA++ G +IAVL ++ Sbjct: 132 VGTRRASAYGKQAAGLLSGELASRGLLIVSGLAYGIDTAAHEAAMRAGGKTIAVLAGSVD 191 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++ ++ ++EQ GAL+SE L FP+RNRIISG+S G +VVE+ L+ G Sbjct: 192 HVYTDPRGKIWPKIIEQ-GALISEELFGSELLPGKFPKRNRIISGMSLGTVVVESDLKGG 250 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA ALEQ REVFA+PG I + S G + LI+ G A +V +++LE L Sbjct: 251 ALITASYALEQNREVFAVPGTIYSHNSRGTNRLIQSGQAKMVLATDDVLEELN-RPSLNI 309 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E++ ++ ELLA + +D +A +AG + E++ L ELEL + Sbjct: 310 PVHEHAATDTVTIVLSKAERELLAYMDTGPIHIDALALQAGHDISELLVLLFELELKKAV 369 Query: 352 AAVPGGYVRLRRACHVRRTN 371 +PG + ++ H + ++ Sbjct: 370 VQLPGQFFGKKQIKHEKNSH 389 >UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding protein n=4 Tax=Gammaproteobacteria RepID=C2LEB7_PROMI Length = 385 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 145/385 (37%), Positives = 219/385 (56%), Gaps = 25/385 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIW+RL +S L + +++ ++ + ++ VL + GL+ +Q+ +F+ + Sbjct: 1 MDAREIWIRLNVVSRLPVNKAIKVVEYLQSLTQLNRKVLLECGLSEQQSHQFMRLQANCV 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +S+L WL++ L+ YP L + P LFV G L S Q+A++GSR + Sbjct: 61 KSTLKWLDKNESSLLTISDSDYPLLLKQISSPPLLLFVAGNKEHLKSTQIALIGSRDATQ 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG +W F + L TITSGLA+GIDGV H++AL+ +GV+IAVLG+GL I+P H Sbjct: 121 YGTKWATYFAQQLVKNKFTITSGLAQGIDGVGHRSALKHHGVTIAVLGSGLEQIYPSFHR 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLA + E G LVSE PPLA +FP+RNRIISGLS +L+VEA ++SGSL+TA A Sbjct: 181 RLAEQIKES-GVLVSEHLPMAPPLARHFPQRNRIISGLSSALLIVEAGIKSGSLITANYA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---------- 290 L+QG+E+F LPG +G+ EG H L+KQGA L + P++I+E L WL Sbjct: 240 LQQGKELFVLPGLLGDSHFEGNHQLLKQGANLASSPDDIMEYLNSSWQWLIFNHNDDLQD 299 Query: 291 ---------PDAPENSFYSPDQQDVALPFPELLANVG-----DEVTPVDVVAERAGQPVP 336 + E+S + + + + + + D+ P+D++A ++G Sbjct: 300 EHIAEVGSAANKKESSNMPLEIEKLTPTQQQSINLILPLLGFDKAIPIDIIANKSGLSTS 359 Query: 337 EVVTQLLELELAGWIAAVPGGYVRL 361 ++ LLELEL +A V GGY+RL Sbjct: 360 DLAPLLLELELIEKVAIVAGGYIRL 384 >UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L5_9FIRM Length = 333 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 7/319 (2%) Query: 43 GLTLRQAQRFLSFPRKSIES-SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE 101 + ++ + K + + LE+ ++ + YP +LL P LF +G Sbjct: 19 KINNKRGSEYKEQLEKLKDKNYIKELEKQGIKVVSVNDRDYPAKLLPYDHRPEYLFYKGR 78 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L +A+VG+RA S YG + R L+ GV I SG+ARGID + AL+ Sbjct: 79 LPDRDKPVVAMVGARACSNYGRKMARALARELSENGVQIISGMARGIDTYSQIGALEGGT 138 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 + AVLG+G++ +P + L +L+ GG ++SE+P P+A++F RNRIISGLS Sbjct: 139 PTFAVLGSGVDVCYPTENIELYNDILKNGG-IISEYPPGAGPIAWHFLLRNRIISGLSDK 197 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 V+VVEA +SGSL+T ALEQG++V A+PG +G S+G + LI+ GA ++T ++L Sbjct: 198 VIVVEAREKSGSLITVEWALEQGKDVMAVPGRVGEKLSDGCNCLIRAGAGIITGANDVLN 257 Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 ++Q+ + + S ++ L + + + + + G E+ Sbjct: 258 DIQYSGSKNENEKKQKEKSLEKD-----LALLYSGLRLQPKNIYELMNETGFKYEELTGM 312 Query: 342 LLELELAGWIAAVPGGYVR 360 LL+L+L G + Y Sbjct: 313 LLKLQLMGLVEQPSENYYS 331 >UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2Y9_9SPHI Length = 376 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 11/366 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-- 59 + ++ L S + + I + + + T + ++ LS + Sbjct: 10 EELRYFIALWSAPKIGPGILKAIIAYSGSAKRFFEIPKGRAAKTPKVGEKLLSIRNQEKS 69 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + L E + ++ + +P + A D P F +G+ + +VG+ Sbjct: 70 LLQKADDLLELCESKGYRILTSLHPDFPKRFKAQEDSPSLFFCQGKADFNAERTVGIVGT 129 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+ R E L+ TI SGLA GID AH+AALQ N ++A++G+ + I+ Sbjct: 130 RSATAYGKAATRKIIEDLSVYQPTIISGLAYGIDIEAHRAALQENLPTVAIMGSPIGQIY 189 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + A S+L G L+SE+P NFP RNRII+GLS ++VVEAA + G+L+ Sbjct: 190 PSVHRKTAESMLLNKGGLISEYPPGGKMAPGNFPARNRIIAGLSDALIVVEAAEKGGALI 249 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 TA A ++VFA+PG + +P SEG + LIK+ A + T P +I E L + P Sbjct: 250 TAEIAYSYDKDVFAVPGNLQSPFSEGCNHLIKKMKANIYTGPNDIAEALFW---TKPGEV 306 Query: 295 ENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + S D ++L + + +D ++ + P+ ++ ++LL LE G + + Sbjct: 307 KASKPKLDFSSRDAEEVKILKILQENGEAGIDEISFQTEIPIGQLSSKLLALEFEGIVKS 366 Query: 354 VPGGYV 359 +PG Sbjct: 367 LPGKKY 372 >UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZD8_DESAD Length = 402 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 123/397 (30%), Positives = 170/397 (42%), Gaps = 37/397 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH--IDAVVLQQTGLTLRQAQRFL--SFPR 57 + L L L I DAV L ++ + R Sbjct: 6 EEYFACLALRYTPGLGPKSWGPILRHYPTAYDGLKDAVNWHSLKLASEKSSKAAQNEEWR 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++P +P L D P L+ G+ L + + +VGSR Sbjct: 66 PKAEKEYREAMRLEFGILPWTHPLFPDLLKELADPPTCLYYFGDPKLLSNPSVGIVGSRN 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI-HP 176 G + L+ G+TITSG A+GID AH+AAL G +IAVLG GL+ +P Sbjct: 126 SGRLGMEYASRLAADLSKSGLTITSGFAKGIDSCAHEAALHGVGSTIAVLGTGLDVDSYP 185 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 L +LE G ++SEFP P A NFP RNR+ISGLS GV+VVEA + SGSLVT Sbjct: 186 PDSDWLRRRVLES-GLIISEFPPGTKPFARNFPFRNRLISGLSIGVVVVEAEIASGSLVT 244 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR A EQGREV A+PGP G+ G LIK+GA LV +++L N++ L Sbjct: 245 ARLAGEQGREVMAMPGPSGDKSFAGCLKLIKEGAALVETADDVLMNIRHALDIEDISGQK 304 Query: 289 ----------------------WLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVD 325 P E + + D + P ++ + +D Sbjct: 305 SVAGAERKLPVKRDDKSSSPKAEDPAKNEPAVPAFDIDSLEPPEYDIAKALKSGGKLHID 364 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +A AG V +L +E+ G + PG Y LR Sbjct: 365 EIARAAGFDVSVAGAVILGMEVNGMVVRFPGMYYDLR 401 >UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG6_CLOCL Length = 344 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 169/346 (48%), Gaps = 5/346 (1%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE 80 + I V L + + E + +L + + ++ + + Sbjct: 2 KRELLEEYQCTKDIYEV-LTAYKNFEYNIKNIEPLDKSYCEEVIKYLAKNDIKIVKINDK 60 Query: 81 FYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLATRGVT 139 YP +LL D P LF +G++ L+ + +A+VGSR + YG + + L + ++ Sbjct: 61 NYPKELLNYDDMPSILFYKGDIEPLNKNENVAIVGSRNPTNYGIDVAEIITKYLCKKEIS 120 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 + SGLA+G+D V HK + N + AV+G+G++ +P + L ++ G ++SEFPL Sbjct: 121 LVSGLAKGVDAVVHKISCDKNNYTCAVIGSGIDVTYPYSNKELYKRII-NNGCILSEFPL 179 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 PL+YNFPRRNRIIS LSK ++VVEA+ +SGSL+TA L+QG+E+ A+PG I + S Sbjct: 180 HTKPLSYNFPRRNRIISALSKRIIVVEASEKSGSLITAGHGLDQGKEIIAVPGSIFSEQS 239 Query: 260 EGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 +G + LI GAI + + E L + + N+ + ++ + N+ D Sbjct: 240 KGTNKLISDGAIPFLSLDTLRETLSISIDKNENMCNNN--RDNTWSLSEVESRIFENLSD 297 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 VD + + ++ L E++ I + G Y + Sbjct: 298 SPIHVDDLISMVNIDINQIYKVLFEMQAKNLIYTLSGNYYAKKYTS 343 >UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SI17_9FIRM Length = 375 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 10/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 WL L + ++ + +R + Sbjct: 15 DPLLCWLWLSQVLGPASLHAGKVLDAFGGAQEAWEARETEEFRQAAGDTAFKRAAQLDAE 74 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRA 117 S + + + ++P D YP D P L+ G+ L+ + +VGSR Sbjct: 75 SFHTLVMQCDALRVRILPFDDPDYPLAFSRIPDMPLVLYCTGDPRWLNEPGTVGIVGSRK 134 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA G I SGLA G+D H+AA++ + +IAV+G ++ +P Sbjct: 135 PTEYGLNAAADIGGELAKNGAVIVSGLADGLDSAGHRAAVKNDCPTIAVMGVPIDRTYPA 194 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +A L + E+ G ++SE+P + N F +RNR+I+ LS VLVVEA +SG++ T Sbjct: 195 ANAALRQQI-ERKGCVISEYPPYSEYVGPNCFLQRNRLIAALSSAVLVVEAREKSGTMST 253 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A G+ V+A+PG I +P S G + L++ G L + Sbjct: 254 VAHAERYGKPVYAVPGSIYSPNSAGTNGLLRDGRARAVAGA----ADLLAALGLHTRQAS 309 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ +LA +G + ++ + G P+ ++ L++LEL G + PG Sbjct: 310 PAAAKQPAPLSDTERRVLACIGPKPVGIEELCVSTGLPMSALLGTLMKLELTGRVYKQPG 369 Query: 357 GYVRLR 362 LR Sbjct: 370 QRYVLR 375 >UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizobiales RepID=A5EKR2_BRASB Length = 372 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 124/364 (34%), Positives = 179/364 (49%), Gaps = 7/364 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLT-LRQAQRFLSFPRKSI 60 + LRL+ ++ + + + + + R + Sbjct: 13 TERRDRLRLIRSDNVGPRTFRSLLNHFGTARAALDRLPELARRGGAARVGRICTID--EA 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E+ L + L+ + YPP+L + D P L V G L +A+VGSR S Sbjct: 71 EAELDACLRQGVQLLAPEENGYPPRLASCEDAPPLLGVRGARETLMQPMIAIVGSRNASA 130 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G ++ L G I SGLARGID AH+A+L ++AVL G + I+P H Sbjct: 131 AGLKFAGQLAHELGRAGFVIISGLARGIDQAAHRASLSSG--TVAVLAGGHDRIYPPEHI 188 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L +++E+ GA +SE PL P A +FPRRNR+ISG S GV+VVEAA RSGSL+TAR A Sbjct: 189 DLLGAIVERNGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGSLITARMA 248 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA--PENSF 298 EQGREVFA+PG +P + G + LIKQGA LVTE +I++ + + P A E+ Sbjct: 249 GEQGREVFAVPGSPLDPRAAGTNDLIKQGATLVTEAADIIQAVGPIMERPPSASLRESDE 308 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + +++A +G +D + +G + LLELELAG + GG Sbjct: 309 ELFAPAPESHDRDQIIALLGPTPVSIDDLIRISGLSPAVLRVVLLELELAGRLERHGGGM 368 Query: 359 VRLR 362 V L Sbjct: 369 VSLA 372 >UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373C7 Length = 422 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 103/422 (24%), Positives = 160/422 (37%), Gaps = 59/422 (13%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M +T+ W+ L + + ++ LT + +R S P Sbjct: 1 MDETKYWMWLSMVFGTGSRRIWEAMCLFTSAQEAFEMLTDGSVVLKLTENEWERLRSTPL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSR 116 + + +I + YP QL + P L+ +G + + + VG+R Sbjct: 61 SAAAKFVEKCRNDGVEVIGYSDKLYPSQLRHLFNPPAILYYKGNISCLTGTKTITTVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + S YG R C LA + I SG A GID H AA + V+G G++ +P Sbjct: 121 SASDYGMRAAETICSELAAKNFVIVSGFAVGIDIATHMAAAGRKRPTACVMGCGVDVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + + +L+ GG +SEFP P NFP RNRI++GL + LV EA+++SGSL+T Sbjct: 181 KPNQQFREKILQCGGVFISEFPPGTQPHPQNFPSRNRILAGLGRAALVFEASVKSGSLIT 240 Query: 237 ARCALEQGREVFALPGP-IGNPGSEGPHWLIKQGAILVTEPEEIL--------------- 280 AR A EQGR+V LP P I + G L++ GA EEIL Sbjct: 241 ARLACEQGRDVLVLPPPDIFSSRYSGNIQLLRDGAEPFYGAEEILELYKLGSPVEEEIRD 300 Query: 281 --------------------------ENLQFGLHWLPDAPENSFYSPDQQDV-------- 306 E L ++ Sbjct: 301 SIEAEYTGREAGIVWAGRTDIEADENEELPVKKTRKRPKKAKEEIPSVPEENRVADADDT 360 Query: 307 -----ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + D D + R E++T+L ELE+ G + ++PG L Sbjct: 361 DNDELTDIQQRIVTELRDGSLHADEICRRLDIDSAELMTELTELEIVGAVRSLPGKMYEL 420 Query: 362 RR 363 R Sbjct: 421 YR 422 >UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZT2_9RHIZ Length = 377 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 10/360 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL ++ ++ + + + R R R +IE+ Sbjct: 21 WLRLYRSENVGPVTFRQLINRFGGAEAALEALPELAERGGR---RIEIADRGAIEAEFDR 77 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 ++ +P + P + G+ +A+VG+R S G + Sbjct: 78 AKKLGAVFACMGEPGFPSMFASDEHSPPVIARMGDPALFEQPAVAIVGARNASLSGIKLT 137 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + F L G + SGLARGID AH+AA+ +I V GL+ +P + L + Sbjct: 138 KRFAADLGAAGYVVVSGLARGIDAAAHEAAISTG--TIGVFAGGLDMPYPPENRSLMRRI 195 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 +++GG L+S P P A +FPRRNR+++ L+ G+LVVEAA RSGSL++AR A E GR Sbjct: 196 VDEGGCLISARPFGWEPRAKDFPRRNRVVATLALGLLVVEAAQRSGSLISARIANELGRL 255 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD---- 302 VFA+PG +P + G + L+K GAIL TE +++E L+ +S P+ Sbjct: 256 VFAVPGSPLDPRAGGSNKLLKDGAILATEAADVIEALRPLDEGRRSRGNDSLDEPEVLET 315 Query: 303 -QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + +G VD + E G V +LELELAG + G V + Sbjct: 316 FEEPAGDERDRIYEALGPTPVSVDDIVEHTGASPGAVQLVVLELELAGRLERQRDGTVSI 375 >UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN5_ELUMP Length = 372 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 109/365 (29%), Positives = 176/365 (48%), Gaps = 8/365 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 + ++L + + L D +R+ I + G++ A L Sbjct: 6 ERLARIKLNAFTYLRTDWAMRMIEVFGSAEMILKTSAKDLAAQGGMSEDTAANLLKEAHA 65 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++ + YP L D P L+V G L A ++A+VG+R Sbjct: 66 LDAEKEAELTNKAGGKILLLEDYEYPQSLKDIKDPPFVLYVRGTLEAR-GPKVAMVGTRL 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG R + F +A G + SGLARG+D V +A + +N + AV+G G+ +P Sbjct: 125 ITPYGRRCAKKFATEIAQAGCVVVSGLARGVDSVCQQAVVDINKPTWAVVGTGIGRCYPA 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + LA ++LE GGA++SE + PP A++FPRRNRIIS LS V+++E +RSG+L+TA Sbjct: 185 ENKALANAVLENGGAIISELSFNKPPNAFHFPRRNRIISALSSVVVIIEGKVRSGALITA 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG--LHWLPDAPE 295 + A EQG+++ A+PG I + S GP+ LIK GA + E +I++ + F + E Sbjct: 245 KLAAEQGKDILAVPGSIESEQSGGPNMLIKDGAHALLETRDIIDLIPFEERFGLNEEVFE 304 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D+ + L +G +D + E VP L E+E+ G + Sbjct: 305 KDSVQKEILDLTETEKQFLEVIGPGEHTIDDIVEALATDVPSAAAVLFEMEIKGVLMCKD 364 Query: 356 GGYVR 360 G Y R Sbjct: 365 GKYSR 369 >UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9Z9_9FIRM Length = 381 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 158/369 (42%), Gaps = 14/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA-----VVLQQTGLTLRQAQRFLSFP 56 WL L + R+ + G Sbjct: 19 DPLLCWLWLANTLGAGSSHAGRVLDVFGGAQEAWENRDSDAFRKAVGSPAFARANLPDNT 78 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGS 115 + N ++P D YP D P L+ G+ L+ + +VGS Sbjct: 79 PAHYWAFARRCAARNIRILPYDDPDYPLAFSRIPDMPLVLYCTGDPLWLNEPGAVGMVGS 138 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA G I SGLA G+D H+AA++ N +I VLG ++ + Sbjct: 139 RRPTEYGLQAAADLGSGLAKNGAIIVSGLADGLDSAGHRAAVKENCPTIGVLGVPIDRTY 198 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSL 234 P + L + EQ G ++SE+P + P+ N F +RNR+I+ LS ++VVEA +SG++ Sbjct: 199 PASNRELRKKI-EQKGCVISEYPPESGPVGPNGFLQRNRLIAALSSALVVVEAQEKSGTM 257 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 T A G+ VF +PG I +P S G + L+++G A V +P ++ L P Sbjct: 258 STVNHAERYGKPVFVVPGSIYSPNSAGTNALLQEGRAKAVCKPSDLFGVLGLRGAAAPAV 317 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 ++ ++ +LA +G + V+ + +G P ++ L++LELAG + Sbjct: 318 VRSA-----PDPMSETERRVLACIGPKAKGVEELGAASGLPTGLLLGTLMKLELAGRVTC 372 Query: 354 VPGGYVRLR 362 +PG LR Sbjct: 373 LPGKRYILR 381 >UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VR82_MARMS Length = 442 Score = 322 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 124/428 (28%), Positives = 190/428 (44%), Gaps = 74/428 (17%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQ--------------------------SHIDAVVLQ 40 WL L +S + + R+ ++++ I +L Sbjct: 14 WLCLSFLSGIGPSRLSRLYTYLSQFDYHASMDNAENLPLFSNEELSDTSPSETITYDLLI 73 Query: 41 QTGLTLRQAQRFLSFPRKSI---------ESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 A++ + + I + SL WLE+ +HHL+ + E YP L + Sbjct: 74 ALKWPEITARQAMDYFSNGILTKEQEAKRDESLAWLEEADHHLVLQEDEHYPTALKEISV 133 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P L+VEG L ++ +VG+R + YG F E L+ RGV + SG A G+D Sbjct: 134 APAFLYVEGNRDTLALPKVGIVGARKCTRYGRDATFQFAEQLSARGVCVVSGGAMGVDTA 193 Query: 152 AHKAALQVNG-VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 AH+ AL +IAV+G GL +P + ++ +LEQGGAL+SE+PL P + FP Sbjct: 194 AHQGALYNKTTPTIAVMGTGLFHRYPHHNRQMFEEILEQGGALISEYPLSTSPRPHLFPP 253 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGA 270 RNRIISGLS GVLV EA+L+SGSL++A A++Q REVFALPG + +P SEG H L++QGA Sbjct: 254 RNRIISGLSMGVLVSEASLKSGSLISASYAIQQNREVFALPGRLIDPQSEGCHQLLRQGA 313 Query: 271 ILVTEPEEILENLQFGLHWLPDAPE----------------------------------- 295 LV ++IL + Sbjct: 314 TLVRHVDDILAECSDLSLPSAPITKSVNITKRVKSSAAEKNTKNPLSNNRNQTAESMPVL 373 Query: 296 -NSFYSPDQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 ++ + + ++A + E D + ++ ++ L+ELEL G + Sbjct: 374 VSNQVHALPESTSDNAKAVIAIMEQEAQPMDFDALIRQSKMDAGLMMQVLMELELYGCVE 433 Query: 353 AVPGGYVR 360 G Y R Sbjct: 434 NREGLYCR 441 >UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S1_9FIRM Length = 367 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 122/373 (32%), Positives = 179/373 (47%), Gaps = 18/373 (4%) Query: 2 VDTEIWLRLMSISS-----LYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRF 52 ++ L + L R+A + +Q LT + AQ + Sbjct: 1 MEVYYMAALAHLLGSRAALLGP----RLAAYFGSAKEAFEASFEQVKASGILTEKGAQHY 56 Query: 53 LSF-PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + + + E + L+ YP L D P L+V+G+L L + LA Sbjct: 57 RKWYDPGLPQKIADYCEIAHISLLGIQESGYPASLREIADPPWVLYVKGKLPNLTA-YLA 115 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVGSR + YG F LA+ + I SG A GID AH+ AL G +I+VLG+GL Sbjct: 116 VVGSRKATGYGLSIAERFSRVLASEKIAIVSGGAYGIDAAAHEGALLGGGKTISVLGSGL 175 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 +P RH L + E GA++SEF PP+AY FP RNRII GLS GVLVVEAAL+S Sbjct: 176 ARPYPVRHKGLFQRISET-GAVISEFSPFTPPMAYQFPMRNRIIVGLSSGVLVVEAALKS 234 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE-NLQFGLHWL 290 G+++TA A ++GR+V+A+PGPI + S+G H LIK+GA LV +P+++L+ + Sbjct: 235 GAMITAHLAADEGRDVYAVPGPIESFTSKGTHALIKEGAHLVDDPQDLLDVYFPEDVPKG 294 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAG 349 A E S + L + ++ + P+ V LL +E+AG Sbjct: 295 AHAVELSLFETFPVPDRKKAEALYDFIKGGNGKQMEEIMAHFPWPLSFVSMLLLRMEVAG 354 Query: 350 WIAAVPGGYVRLR 362 + G +R Sbjct: 355 MVRKSAGNRYLVR 367 >UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE7_9DELT Length = 432 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 123/416 (29%), Positives = 175/416 (42%), Gaps = 58/416 (13%) Query: 1 MVDT---EIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFL 53 M D E W L L L R+ G+ +A Sbjct: 15 MDDRARREYWAGLALRHCRGLGARSCCRLLRHFGSAFAALEGRERWADAGVDRGKAAEIS 74 Query: 54 S-FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + R + + + + ++ YP L D P L+ G+L L + +AV Sbjct: 75 TGSWRVTARTEWDAVRDLDAVIVQWHEAAYPALLRTLPDAPVLLYCMGDLSLLANPAVAV 134 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +GSR + G+ A+ G+T+ SG+A GID AH+AAL G SIAVLG G++ Sbjct: 135 IGSRKATPRGQALAGHMAGAFASWGITVVSGMAWGIDKAAHEAALDRTGSSIAVLGTGID 194 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + RL + + G LVSEF +P L NFP RNRIISGLS GV+VVEAA RSG Sbjct: 195 VPYPRANIRLYDRMAAK-GLLVSEFAPGIPALRENFPIRNRIISGLSLGVIVVEAASRSG 253 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+T+R ALEQGREV+A+PG + S G L++QGA V PE++LE+L L Sbjct: 254 TLITSRLALEQGREVYAVPGAALSGQSLGCQELVRQGAKPVFAPEDVLEDLAGPLRDFGV 313 Query: 293 APEN------------------------------------------------SFYSPDQQ 304 E+ + Sbjct: 314 QAEHLTREAAERRRRAEAEGTGLSRTLFACMPPETDAPARKVDPGDGEGAPAQGTDGETD 373 Query: 305 DVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 A ++ + + VD + G+ E+ LL LE+ G I +PG Sbjct: 374 TAAPAQDNIVPLLREQGPLHVDALGAALGRSPAELAPVLLGLEIMGRIRRLPGARY 429 >UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZE6_DESDA Length = 442 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 121/417 (29%), Positives = 172/417 (41%), Gaps = 61/417 (14%) Query: 4 TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAV--VLQQTGLTLRQAQRFLS-FPRK 58 TE W L L + L R+ ++ GL +QA + R Sbjct: 16 TEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRV 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YPP L D P L+ G+L L + AVVGSR Sbjct: 76 TARDEWDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRA 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + +G L+ GVTI SG+A GID VAH+AAL G SI VLG G++ ++P Sbjct: 136 TEHGRAVAAHMSRCLSACGVTIVSGMALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSV 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + ++ ++EQ G LVSEF PL +FP RNRIISG + GVLVVEAA RSGSL+TAR Sbjct: 196 NRKIFG-MMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLVVEAASRSGSLITAR 254 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW--------- 289 ALEQ REV+A+PGP + G L++QGA V E++L +L L Sbjct: 255 LALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLG 314 Query: 290 ----------------LPDAPENSFYSPDQQDVALPFPELLANVG--------------- 318 + E+ + + E + + Sbjct: 315 DEEKIGPELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENL 374 Query: 319 ---------------DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 D +A V ++ L+ LE+ G + +PG Sbjct: 375 APAGRRAALLDCLRQRGPMQADDLACALDISVADLNVMLVGLEMLGQVCRLPGARYA 431 >UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHB6_9BACT Length = 368 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 9/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T + L ++ + + I + + + A+ R+ E Sbjct: 8 TETLSLMTLGALPGVGLKTLRTILARYKSATAALEAFARGAEVCACSAENLAEA-RQWAE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + E ++ YP +L D P LF G + + +AVVG+R + Y Sbjct: 67 AEMAYCEAHAVRILTMADADYPARLRTCDDAPPYLFYRGAANLNAKYVVAVVGTRNITEY 126 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G+ R C LA V + SGLA G+D AH+ AL N ++ VL +GL+ ++P H Sbjct: 127 GKDLCRHLCRDLADFSPDVLVLSGLAYGVDVHAHRQALAANLPTVGVLAHGLDRLYPSAH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A ++L +GG L +E+P P F +RNRI++G++ V+VVE+ +R G+L TAR Sbjct: 187 RTTAIAMLNKGGLL-TEYPRLTVPEKGRFLQRNRIVAGMADVVVVVESGIRGGALATARL 245 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A + R V+A PG + S G + L++ G A L+T E++L + L E S Sbjct: 246 ARQYERPVYAFPGRASDEMSAGCNALLRDGRAKLITSAEDLLSD---WLGVKVKVQEASP 302 Query: 299 YSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + D+ +L+A + + +D +A A V + L +L + G++ +PGG Sbjct: 303 ATDLFADLTRNEQKLIAVLKQHDCRTLDQLAAEADLAHSVVASLLFDLNMRGFVKTLPGG 362 Query: 358 YVRLRR 363 RL R Sbjct: 363 AYRLVR 368 >UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms RepID=B9P8E5_POPTR Length = 371 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 176/365 (48%), Gaps = 11/365 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA---VVLQQ---TGLTLRQAQRFLSFP 56 + WLRL + + R+ + A L++ + + Sbjct: 10 EVAAWLRLTATPGVSALAGRRLLAKFGLPQTVLAQNLASLREVVDAKVACVLNAPLDAAM 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I+ ++ WL H ++ YP LL D P L++ G+ L L +VG+R Sbjct: 70 SALIDRTVAWLADARHAMVTMADAGYPAGLLDLADPPLLLYINGDPARLAGPALGMVGAR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R + F + G T+ SGLA GID AH AL+ G ++AV+G G + ++P Sbjct: 130 KATTQGARDAQAFASAFSNAGWTVVSGLALGIDAAAHAGALEGPGGTVAVIGTGADIVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA +++ GGA+VSEF L P L +FPRRNRII+ LS+GVLVVEAA RSGSL+T Sbjct: 190 GRHHALAHRIVDAGGAIVSEFALGTPGLPNHFPRRNRIIAALSRGVLVVEAAERSGSLIT 249 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GREVFA+PG I + G H LI+QGA LV P ++ E P + Sbjct: 250 ARLASEIGREVFAMPGSIHAELARGCHKLIRQGAKLVETPADVFEEFG-----DPGGVAS 304 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 P +P A + + D + ER+G LLELEL G + + G Sbjct: 305 VAPVPVPDSAPVPGDPFGAALAYDPVTFDALCERSGLAPHMAAAMLLELELGGTVERMAG 364 Query: 357 GYVRL 361 R Sbjct: 365 NRYRR 369 >UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGN8_9FIRM Length = 361 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 169/360 (46%), Gaps = 12/360 (3%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFL-SFPRKSIESSLC 65 I L ++ I +L G+ + A+ L S E L Sbjct: 2 SEIKGLGSVTCRKLLQVFQTPEEIYRAAKGDLLSVAGIGEKTAEIILGSRSLSPAERILE 61 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + + L+ + YP + D P L+ GEL S +AV+G+R + YG++ Sbjct: 62 KMARLEIKLLTIEDVCYPGEAANLADAPPVLYYRGELREDSS-GVAVIGARRCTAYGKKV 120 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + E LA V + SG+A+GIDG AH A + G ++A LG+GL+ +P H L + Sbjct: 121 AKEAAEFLAKNEVPVISGMAKGIDGYAHTACINAKGYTLAFLGHGLDLCYPPEHLELMEA 180 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 ++E GA++SE+P P FPRRN ++S S +LVVEA SG+L+TA+ A EQG+ Sbjct: 181 IVE-NGAVISEYPPGTPAKQVYFPRRNYLLSAWSHKLLVVEAGYNSGALITAKVAREQGK 239 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ- 304 EV A+P I N S G + LI GA + +P+++LE + + + + Sbjct: 240 EVLAVPNGIYNRESYGTNRLIADGAKIFIKPDQLLEMPRENVSVDRSVKQKRKSKVVAEI 299 Query: 305 ----DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +++ +G E ++ +A + + L +EL G + +PGG R Sbjct: 300 VSVVEDSAYERQIIELIGSEEVSIEKLALSFTENRKSFLEALSVMELEGKVKRMPGGMYR 359 >UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD54_9FIRM Length = 415 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 111/407 (27%), Positives = 162/407 (39%), Gaps = 48/407 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M D W L L RI + + ++ ++ +R + Sbjct: 1 MTDVVFWAWLQDAIGLGSVRADRIIREFSSPEALYGKSARELEALGMFAPKEIERLRATT 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGS 115 + E+ I D YP L P L+V+G L + +VG+ Sbjct: 61 LDRAREQIKTAERLGCMAIGPDHPDYPEALTNIDAMPCILYVKGSLSGLSDELVITMVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G T+ SGLA GID +H ALQ +G +I +L GL+ + Sbjct: 121 RSATEYGLASAYRLSHDLAAAGCTVVSGLATGIDTASHAGALQASGRTIGLLACGLDVDY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P L +L+ GGALV+EFP +F RNR++SG++ GV+VV+A RSG+L+ Sbjct: 181 PSASGELKRRILDAGGALVTEFPFGTGVNRGSFSIRNRLLSGIAAGVVVVQAPERSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------------ 283 TAR AL+Q R+VFA+PG I +P G + L + GA +V ILE Sbjct: 241 TARYALQQNRDVFAVPGEIFDPSMAGCNKLARDGAKVVVNVYSILEEYIGRFPKRIDART 300 Query: 284 -------------------------------QFGLHWLPDAPENSFYSPDQQDVALPFPE 312 D P ++ V Sbjct: 301 VAARIKSADRNAAKPPQNAPRRIKGVKACAKPATAPKQADVPRMDDGELAKRGVTPQARA 360 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + A +G D +A AG E ++ L ELEL G+ V GG Sbjct: 361 VYAQLGARALERDELAALAGLGAAETLSALTELELTGFARVVAGGRY 407 >UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV04_9GAMM Length = 360 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 138/360 (38%), Positives = 188/360 (52%), Gaps = 16/360 (4%) Query: 2 VDTEIWLRL--MSISSLYGDDMVRIAHWVAKQSHIDAVVLQ------QTGLTLRQAQRFL 53 +D E L ++ ++ I L+ L + Q Sbjct: 1 MDRECHYALVSQHLNKFTPKFQRQLLESAQTYCAIFEQSLEGLPKSLHPFLENLRNQYEQ 60 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + R+++E+ + E +IP S YP QL P L++ G + LH QLA+V Sbjct: 61 ASWREAVETIVLRTEDCGARMIPITSPDYPDQLRQIGGAPRLLYLRGSIDNLHLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + G R + E LA G ITSGLA G+DG AH AL G +IAV+ G+ Sbjct: 121 GSRRMTRGGADNARAWSEHLAAGGFVITSGLAHGVDGAAHLGALDAGGKTIAVMATGIEA 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR H +LA +++QGG L++EF PLA NFP RNRIISGLS GVLVVEAALRSGS Sbjct: 181 VYPRAHLKLAEQIIDQGGTLITEFEPTTKPLATNFPSRNRIISGLSLGVLVVEAALRSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TAR ALEQ REVFA+PG I NP S G H LIKQGA LV + +EI+E L+ L L Sbjct: 241 LITARYALEQDREVFAIPGSIHNPQSRGCHHLIKQGAQLVEKAQEIVEQLKGSLSGLAQD 300 Query: 294 PENSFYSPDQQ--------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 ++ P ++ +LL+++G E T +D + V E+ L+ L Sbjct: 301 VLSATEPPQAPFSVTHGALNLEADEVQLLSHLGYEPTDMDSLISDGFFSVSELSRLLVAL 360 >UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexaceae RepID=B8G3R3_CHLAD Length = 362 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 157/333 (47%), Gaps = 13/333 (3%) Query: 1 MVDT--EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ---QTGLTLRQAQRFLSF 55 M+D ++ + + R+ + GL R + Sbjct: 1 MIDDTIRYYIGFNLTPGIGPLRLSRLIERCGSVAAAWHADDATMVAAGLDARSIANLRTA 60 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + ++ + L + YPP L P L+V G + A +A+VG Sbjct: 61 RQTLDLDVEVARLRAHGITPLAITDPAYPPLLRMIAAPPPLLYVRGTMTASDQRAIAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG R LA G+TI SGLA G+D +AH AAL+ G ++AVL G + + Sbjct: 121 TRHPTPYGREVTRRLARDLAVVGITIVSGLALGVDTIAHTAALEAGGRTLAVLACGADRV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P R+ LA ++ GAL+S++PL PP NFP RNRII+GLS LVVEA SG+L Sbjct: 181 YPERNRILAEQIV-TAGALISDYPLGTPPAPLNFPPRNRIIAGLSLATLVVEAREDSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T + AL+QGR+V A+PG I NP S GPH LI++GA ++T +++L L Sbjct: 240 ITVQFALDQGRDVMAVPGSIFNPLSAGPHRLIREGAAIITSAQDVLGVLNLEGRSDLHE- 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 P + + + V E +DV+ Sbjct: 299 -----PPLELALTAEEEAIYRVVESEPQHIDVI 326 >UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHG5_9CLOT Length = 369 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 168/366 (45%), Gaps = 7/366 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + WL L + + + Q L+ RKS + Sbjct: 4 DELLDWLWLAQAFPYGSIKPAELLTEYQHARAVYEHRSECAERFDFLTQSELAAMRKSPQ 63 Query: 62 S---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 L + + +IP D YP +L P L+ G L A +AVVG+R Sbjct: 64 EYLPILERCARFDIQVIPYDHPAYPARLQTIDCPPVVLYCRGSLAAFSESLCIAVVGTRT 123 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S Y +R LA RG+ + SG + GID H+AAL V G + AVL L+ +P Sbjct: 124 PSEYSKRVAAYAGRELAQRGICVLSGCSEGIDAEVHRAALSV-GRTAAVLSCPLDKNYPA 182 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L +L GGALVSEFP F RNR++S LS GV+VVEA+ +SGSL TA Sbjct: 183 SNEGLRREILRHGGALVSEFPPGTEFFPEQFALRNRLLSALSDGVVVVEASAKSGSLSTA 242 Query: 238 RCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 R A +QGREVF + P + NP +G L+++GA ++ E ++ PE Sbjct: 243 RAAADQGREVFCVPPADLFNPRYDGVKPLLREGAAQFLSVGDVTEAFRYQFSVAATLPEE 302 Query: 297 -SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +SPD +++ EL + D+ ++ + G V +++ L +LEL+G + Sbjct: 303 GTAHSPDLSELSSQEVELYRAMPDDPVDTGYLSAKTGLLVSDLMQMLTKLELSGAVRKTA 362 Query: 356 GGYVRL 361 G Y ++ Sbjct: 363 GRYQKV 368 >UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XL72_HIRBI Length = 373 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 127/361 (35%), Positives = 177/361 (49%), Gaps = 6/361 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWV-AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + L+L+ ++ ++ + + T + F IE Sbjct: 12 ERAKRLQLLRTPNVGPMTYAQLMSRFSGDIDAVLDALPNLTTRAGKHRD-FKLPSLSIIE 70 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + I D YP L A T P + V G++ A +A+VG+R S Sbjct: 71 REIDKAHKIGARFIAYDEADYPLPLNALTPPPPMICVRGKMEAFLKPGIAIVGARNASAA 130 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + R LA G TI SGLARGIDG AH AALQ G +IAVL G++ I+P HA+ Sbjct: 131 GRKLTRDISHELAKSGYTIVSGLARGIDGEAHAAALQT-GHTIAVLAGGVDAIYPPEHAK 189 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++LE+ GA+VSE PL A +FP+RNRII+GLS VLV EAALRSGSL++AR AL Sbjct: 190 LYDAILER-GAIVSESPLGYIATAKDFPKRNRIITGLSMAVLVAEAALRSGSLISARVAL 248 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGREV A+PG + + G + L++QGA LV E+++ L+ + + PE + Sbjct: 249 EQGREVLAIPGSPLDERTRGSNGLLRQGAWLVENAEDVIAALENSIPPMLAEPEAPTFET 308 Query: 302 D--QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L + T +D + P+ EV L ELEL G GGYV Sbjct: 309 LSMIDVSLSTIQSLTMALSPTPTHIDELVRVVRAPLREVNAALTELELDGIAQTHAGGYV 368 Query: 360 R 360 Sbjct: 369 S 369 >UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bacteroidales RepID=C3QS04_9BACE Length = 374 Score = 319 bits (818), Expect = 9e-86, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 11/369 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + + L + + + + I + + +QR + Sbjct: 6 EEQIYSIALTMVPGIGHIGAKHLIDGMNNAVDIFRLRKEIPERIPEVSQRVVDALDCPQA 65 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E ++ + + E YP +L D P LF +G L +VG+R Sbjct: 66 VIRAEQEYEFIRKNRIACLSFHDEAYPSRLRECEDAPVVLFFKGNADLNSLHILNMVGTR 125 Query: 117 AHSWYGERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + YG + F L V + SGLA GID AH+ AL ++ VL +GL+ I Sbjct: 126 NATDYGTQICASFLRDLKAVCPDVLVVSGLAYGIDIHAHREALANELPTVGVLAHGLDRI 185 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A +LE+GG L +EF P +NF RNRI++G+ +V+E+A + GSL Sbjct: 186 YPYVHRKTAVDMLEKGGLL-TEFLSGTNPDRHNFISRNRIVAGMCDATIVIESAEKGGSL 244 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A R+ FA PG + + S+G + LI+ A L+ E+ ++ + + + + Sbjct: 245 ITAELAEGYHRDCFAFPGRMSDEYSKGCNRLIRDNKASLLLSAEDFVQAMGWNMQT-TLS 303 Query: 294 PENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + S +++ +++A + ++ + A PV ++ L ELE+ G I Sbjct: 304 EKVSVQRSLFIELSEEEQKIVAILEKLGNLQINSLVVEADIPVNKMTALLFELEMKGVIR 363 Query: 353 AVPGGYVRL 361 + GG +L Sbjct: 364 VLAGGMYQL 372 >UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBH9_9FIRM Length = 365 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 112/367 (30%), Positives = 174/367 (47%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFL-SFP 56 M + L + + GD + + +++ +T ++ S Sbjct: 1 MSEMWYTYWLACVEGITGDRKCELCRKNGSAEAVYYIEEKGIREQIITEKEWGILKESKK 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + + + YP + P ALF GE+ +AVVG+R Sbjct: 61 KRNWREAYQKVVDRGIQMAVRGQNNYPKRFEELAGMPYALFFIGEMPREGMPSVAVVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YGE+ F E LA G+ I SG+A GIDG+AH+AAL V G + AVLG G + +P Sbjct: 121 RCSSYGEKMTLRFVERLAESGIQIISGMALGIDGMAHRAALNVGGKTFAVLGGGADVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L L+++GG ++SE P PP+A++FP RNR+ISGL+ VLV+EA +SGSL+T Sbjct: 181 AAHKGLYKDLIKRGG-ILSEQPPGTPPVAWHFPARNRLISGLADVVLVMEAKEKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+++ALPG + P S G + LI+QGA + EE L L Sbjct: 240 ADMALEQGRDIYALPGMVTEPLSCGCNRLIRQGAG-ILLNEEDLLEELVIKGLLKKKIAI 298 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ + + + +G +D + G EV+ + L+L G I Sbjct: 299 ISDTKNKIKLETKENLVYSKLGLYPRGLDDLQRETGLTPQEVMGICVSLQLKGCIQERSK 358 Query: 357 GYVRLRR 363 Y + Sbjct: 359 NYYVRAK 365 >UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finegoldia magna RepID=C2HGN6_PEPMA Length = 356 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 162/338 (47%), Gaps = 9/338 (2%) Query: 24 IAHWVAKQSHI-DAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEF 81 I I + + + + L +K I L + + Sbjct: 22 IIENYDTLDDIIYDNAKKLLEVDSKIYEFILKNMKKFDINLYKEKLWKNSIKFTTYGDSK 81 Query: 82 YPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTIT 141 YP +LL D P L+ +G L+ ++ VG+R S YG + F ++ + + Sbjct: 82 YPKKLLEIDDAPYTLYYKGNLNEDFDNCVSFVGARKCSQYGSYACKKFVSEISQYKIPVV 141 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS-LLEQGGALVSEFPLD 200 SGLA GID ++H+ +L+ N +I VLG G++ ++PR + R+ + G ++SE+P Sbjct: 142 SGLALGIDKISHQTSLENNNKTIGVLGCGIDQVYPRSNYRVFQDMISSHNGVIMSEYPFG 201 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 + PL YNFP RNRIISGLS +V+EA +SG+L+T+ AL QGRE+FA+PG I + S Sbjct: 202 IAPLPYNFPFRNRIISGLSLATVVIEAKEKSGTLITSSYALSQGREIFAVPGNINSVYST 261 Query: 261 GPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 G + LIK GA ++T+ +I+ + + D+ ++ + Sbjct: 262 GTNQLIKDGAYILTDVLDIITQI------PEFQNKYIEKPQLSFDLNELERKIFNLLKIC 315 Query: 321 VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D ++ + + + +V+ L ++EL G + + Y Sbjct: 316 ANSPDEISIKLNEDISDVLMSLTKMELLGIVVDIGSKY 353 >UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZE8_9SPHI Length = 370 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 10/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 ++T + + L + + + I +Q G+ + +R S Sbjct: 1 MNTLLQIALTKVKGIGPRLSRSLLSHCDAVEAIFTASKKQLLTIPGINMAIIERLRSKEL 60 Query: 58 KSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++ + L+ + YP +L D P L+ +G + +++VG+R Sbjct: 61 LLEAEKELSFISAHDIDLLWIEDNRYPRRLRECDDAPLVLYYKGSESLNPAKTISIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+R + L G+ I SGLA GID AH+AAL+ ++ ++G+GL+ I+P Sbjct: 121 KATAYGQRICDELIQELRLPGIQIISGLAYGIDISAHQAALRNQIPTLGIMGHGLDRIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +AA +L GG L +EF P NFP RNRII+G++ +V+EAA R G+L+T Sbjct: 181 AAHRAIAAEMLSCGGLL-TEFTSGTNPDRQNFPMRNRIIAGMADVTIVIEAASRGGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPE 295 A A R+V A PG I S G ++LIK A L+ ++ + + Sbjct: 240 AEIANTYNRDVCAFPGGIDQESSAGCNYLIKTNRAHLIRHASDLFYLMNW--EQEQQQKP 297 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ S ++ ++ + + P+D +A P ++ LLELE+ G I ++ Sbjct: 298 SAQLSLLPPQLSEEQEKIYQFLQQQNPAPIDEIAIHCALPQSQLAISLLELEMEGIILSM 357 Query: 355 PGGYVRL 361 PG +L Sbjct: 358 PGKVYKL 364 >UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacterium RepID=B1ZLL3_METPB Length = 397 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 131/392 (33%), Positives = 175/392 (44%), Gaps = 38/392 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ + + + S + LT R +R + R E Sbjct: 7 QRLDWLRLIRTGGIGPRSFRGLINRFGSASAALDALPD---LTKRAGKRAVPPTRAEAER 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + I YP L AT P + V G+ L +A+VGSR S G Sbjct: 64 EMAAAARLGARFIAMGEAAYPKALHATETAPPLIAVRGDAAVLLKASVAMVGSRNASTAG 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + G+ + SGLARGID AHKAA+ ++AVL G + I+P HA L Sbjct: 124 LAFTERLARGFGEAGLVVVSGLARGIDARAHKAAVTTG--TVAVLAGGQDKIYPETHAGL 181 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++++ GGA+V+E P+ P FPRRNRIISGLS G +VVEAA RSGSL+TAR ALE Sbjct: 182 VDAIVDAGGAVVAEMPMGWVPRGREFPRRNRIISGLSLGTVVVEAARRSGSLITARFALE 241 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QGREVFA+PG +P +EG + LI+QGA LV+E E +L L+ + + P+ Sbjct: 242 QGREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLEPLIAGGAPSAGGLDDRPE 301 Query: 303 QQDVALP---------------------------------FPELLANVGDEVTPVDVVAE 329 L+A + D +A Sbjct: 302 PSGTTDYWDEIDFDGTAPVALSLFPGADEPVETGSEPEDDRTRLIARLSPTPVATDELAR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G PV V T LLELEL G I G V L Sbjct: 362 STGLPVRVVQTTLLELELDGRIERHGSGTVSL 393 >UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacter RepID=A5WI26_PSYWF Length = 421 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 116/412 (28%), Positives = 176/412 (42%), Gaps = 52/412 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 + L L + ++ Q G+ + R ++ Sbjct: 10 TEKAAILLLWQRVNTSLSAFYKLIAHFETAQQALQAGRSQWQNLGIHKKHLDRHAQASQE 69 Query: 59 S----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 I + L+ YP QLL D P LF G L+ Q+A+VG Sbjct: 70 EDAQFIAQLEQRMAAGEFQLLFQQQADYPQQLLGLFDPPPLLFYRGNKQRLNQAQIAIVG 129 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL----QVNGVSIAVLGNG 170 SR + +R+ + LA G I SGLA+G+D AH AL + G S+ V+G G Sbjct: 130 SRRPTPKAQRFSFDIAQYLAKSGFIICSGLAQGVDAQAHLGALSQSAEYAGRSVGVMGTG 189 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P++H L ++ +GG +VSE PP + FPRRNRI++GLS G +V EAAL+ Sbjct: 190 IDVCYPKQHQALFDRMIAEGGCIVSELFPGTPPHKHTFPRRNRIVAGLSLGTVVTEAALQ 249 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL---------- 280 SGSL+TAR EQG++VFALP I N ++G H LI++GA LV P++I+ Sbjct: 250 SGSLITARLTSEQGKQVFALPSDIDNVNAQGGHHLIREGATLVYHPDQIVSDLCHQLVTP 309 Query: 281 ---------------ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN--------- 316 ++L P N+ S +L Sbjct: 310 VQISQAKDTIYGNSSDHLHANATSHPTKHPNAVSSDTTATPKDNVNPILKAQKSVTISEH 369 Query: 317 -------VGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + E +D + + +++QL+ELEL G +A V G Y R+ Sbjct: 370 LQPLWVHIQFEPQDLDALINKTQLDTATLLSQLMELELMGAVAEVGGRYQRV 421 >UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidetes RepID=A5FL93_FLAJ1 Length = 366 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 14/370 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLS 54 M D E L L+ + + ++ +K + + G+ + Sbjct: 1 MSDQELFYLLALLKVDGVGDIMAKKLLVNCSKAEDVFKTKTNQLAAIDGVGSVLLKNLKD 60 Query: 55 FP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + L ++ + N + E YP +L D P LF G ++ + +++V Sbjct: 61 KSIFEKANQELEFIRKNNITVSYFQEENYPDRLKHCLDSPVLLFSGGNINLKNKKIISIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + R E L I SG A G+D VAH+ A+ N +I VL +GLN Sbjct: 121 GTRQITSYGIEFCRKLIEDLIPLDPVIVSGFAYGVDIVAHQFAMDYNLQTIGVLAHGLNQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+ H + A + E G ++EF P NF +RNRI++G+S+ +V+E+A + GS Sbjct: 181 VYPKTHKKYMAKM-EGNGGFITEFWSSSNPDKENFVKRNRIVAGISEATIVIESADKGGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPD 292 L+TA A + R+VFA+PG + + S+G + LIK Q A ++T +++ L + L P Sbjct: 240 LITANLANDYNRDVFAVPGRVTDRYSQGCNDLIKTQKANVLTSAADLIYVLNWDLEKKPK 299 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWI 351 + + D+ ++ + +D++A P+ ++ LL +EL G I Sbjct: 300 VIQQQLF----IDLNPDEQKIYDFLLKNGKELLDIIALECDLPIFKISGTLLNMELKGII 355 Query: 352 AAVPGGYVRL 361 +PG + Sbjct: 356 RPLPGKMFEV 365 >UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA39_9RHOB Length = 397 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 25/357 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ ++ + + + + + +++ R S + E Sbjct: 15 TQRLAWLRLIRSENVGPRTFRELLNHFGSAQAALDALPELSRRGGKKSYRLFSQDK--AE 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-----FQLAVVGSR 116 + L L + LI YPP L P L V LA++G+R Sbjct: 73 AELAALYKIGARLIALGEPAYPPLLRHIDAPPPLLAVRARDPLQQELTGTQKTLAIIGAR 132 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G ++ L+T+G TI SGLARGID AH AAL +IA G++T++P Sbjct: 133 NCSAAGAKFATQLAGELSTQGFTIISGLARGIDSAAHHAALSSG--TIAAFAGGIDTVYP 190 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + L +S++ GA +SE P+ P A +FPRRNR+ISG+S GV+++EAA +SGSL T Sbjct: 191 KENLELFSSMIATNGAAISEMPISWQPRARDFPRRNRLISGMSLGVILIEAAEKSGSLYT 250 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR ALEQ RE+ A+PG +P S G + LI+QGA LV +++L+ ++ + Sbjct: 251 ARYALEQNREILAVPGSPLDPRSVGANKLIQQGAALVQSVDDVLDIMEPKISMSLPLHQG 310 Query: 289 --------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 D+P+ + SP ++ + + D + G + Sbjct: 311 IEEPTSNWPKLDSPDTNSPSPPLNANEQDRLAVIDALSETPIDQDELLRFTGVSLQT 367 >UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZ86_9CLOT Length = 379 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 10/372 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFP 56 M + +L L + + +I + I + + + +++ Sbjct: 7 MDKRDAYLWLYGVVGCNNLTIDKIEREMPGTKDIFDFSEKTIYNLERVNDKVKSSIINYK 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +++ L + N + YP +L D P LF +G L AL + +VG Sbjct: 67 NNMNVDDYKELLYKKNVKYSVIGDDDYPYKLANIYDAPKVLFYKGNLSALGKHFSIGIVG 126 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ G I SGLA G+D ++H+A+L G + VLG+G++ Sbjct: 127 SRKPTVYGAECTKKLARELSDYGADIISGLAIGVDAISHEASLLGKGKTFGVLGSGIDNP 186 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + L +++ GGA++SE ++ + F RNRIISGLS GV++VEAA +SG+L Sbjct: 187 LPKTNIWLMNKIVDSGGAVISEHGINKKVHPHYFANRNRIISGLSDGVIIVEAAKKSGAL 246 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA A EQGR VFA+PG I + S+G H LIK+GA L +++LE + + Sbjct: 247 ITAEFAAEQGRSVFAVPGSIFSENSKGCHRLIKEGAKLTENIDDVLEEFEVFKFKTLEKE 306 Query: 295 ENSFYSPDQQDVALPFPELLANVG----DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 A + V + +D + + + ++ + +L+L Sbjct: 307 IKYDTIEKADINADLEDDENILVDIIRKNGSIDMDSLCLKTKFGIEKINPIVEKLKLYDL 366 Query: 351 IAAVPGGYVRLR 362 I + G ++ Sbjct: 367 IFEIEKGVYSMK 378 >UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderiaceae RepID=B2T1K4_BURPP Length = 422 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 131/401 (32%), Positives = 189/401 (47%), Gaps = 52/401 (12%) Query: 14 SSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------RKSIESSLCWL 67 L + + I + A + +++ + W Sbjct: 21 PGLKPGALRLLLGAFGLPEAIFEQAPEALAEIAGAAAASAALAPTGPDFDAQLDAVIAWR 80 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 EQP + ++ D YPP LL D P L+++G L+ LH+ +A+VGSR+ + G Sbjct: 81 EQPGNQVVTLDDPAYPPALLTMPDPPPLLYIKGRLNLLHTRAVALVGSRSATPQGVEDAE 140 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L+ GVT+ SGLA GIDG AH+ LQ G ++AV+G G + ++P H LA + Sbjct: 141 RFARELSVAGVTVVSGLALGIDGAAHRGGLQGIGGTVAVIGTGADLVYPAAHHALARQIA 200 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 Q GA++SE+PL P A +FP+RNR+I+GL GV++VEAA+RSGSL+TAR A E GR++ Sbjct: 201 VQ-GAILSEWPLGTPARAAHFPQRNRLIAGLVSGVVIVEAAMRSGSLITARLANEMGRDI 259 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY-------- 299 FALPG I P S G H +IKQGA LV P+E+LE L F P A S + Sbjct: 260 FALPGSIHAPLSRGCHRIIKQGAKLVETPDEVLEELGFARQAAPRAASGSAHATFSNRAF 319 Query: 300 -------------------------------------SPDQQDVALPFPELLANVGDEVT 322 + LLA +G T Sbjct: 320 SRNTPTGSGAAADRAQLAALQPTEASPAVSAEAPLAAATPCPPANPEAQRLLAALGHSPT 379 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 ++++A R ++ T LL+LELAG + +PGG Sbjct: 380 TLEILATRTEMEDADLQTALLQLELAGHVTMLPGGRFMRAS 420 >UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ50_DESPS Length = 357 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 124/358 (34%), Positives = 180/358 (50%), Gaps = 12/358 (3%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSF--PRKSIESS 63 L S S L R+ + S + L Q GL Q F R S Sbjct: 5 LCSASGLGVRGFWRLIEFYHHPSRVLDASLAQIRSVAGLREGQLAGFADPQSLRLSAAEE 64 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L L+ I S YP L D P L+ G+L L++ LA+VG+RA + YG Sbjct: 65 LGRLDALGLLAISFSSPLYPENLKQIFDPPPVLYASGDLSLLNTHALAIVGARASTSYGR 124 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R ++ G+T+ SGLA G+D AH+ AL V+G +IAVLG GL+ ++P ++ +L Sbjct: 125 RVAHNLSSAVSLAGLTVVSGLALGVDTAAHEGALAVSGKTIAVLGCGLDIVYPYQNKKLY 184 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++ G +++E+PL P + FP RNRII+G+S GVLVVEAA +SGSL+TA+ AL+ Sbjct: 185 -KIIAGEGLVITEYPLGTRPDGFRFPARNRIIAGMSDGVLVVEAARKSGSLITAQLALDF 243 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 REVFA+PG I + S G H L++QGA LV + +ILE F L + P + Sbjct: 244 NREVFAVPGQIDSVKSAGTHILLQQGAKLVHDVTDILEEFPFPLRVGQGGQKGEASLPSE 303 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++L + + + + + +V +LL LEL I +PG VR Sbjct: 304 AG-----QQILDLLDVYPSSQEELMVESKLSAKKVAEELLLLELEDLIEILPGNMVRR 356 >UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=Deinococcus RepID=Q1IVU7_DEIGD Length = 358 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 116/366 (31%), Positives = 171/366 (46%), Gaps = 23/366 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRF-LSFPR 57 + + L L L + ++ A L GL R + PR Sbjct: 9 ELQALLTLRFTPGLGPRRIEQLRRHFGSAEAALAAPLTALRDVPGLDARSVAALGTAKPR 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--SFQLAVVGS 115 + E+ L + L+ YPP L A D P L+V+GEL + +VG+ Sbjct: 69 EQAEAELVKARKEGVTLLGRGLPGYPPALEALGDPPPVLWVKGELPDFPVVPRAVGIVGT 128 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S + R LA GV + SGLARGID AH A+++ G S+ VLG+ +N I+ Sbjct: 129 RGASPHALSLTRTLAADLARAGVIVISGLARGIDTAAHAASVEAGGHSVGVLGSAVNVIY 188 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A LA L LVSE+PL P ++FP RNR+I+ LS +VVE L+SG+L+ Sbjct: 189 PSENAHLARHLT-----LVSEYPLGTGPAQHHFPTRNRLIAALSAATVVVEGELKSGALI 243 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V A+PG G+P + GPH L+++GA+L ++IL L +G Sbjct: 244 TATHALECGRTVCAVPGRAGDPRAAGPHRLLREGAVLTETAQDILNELGWG--------- 294 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D+ A + +D + G +P++ T L+ L+L G V Sbjct: 295 -EAPAAPTSDLPPEQARTYAALT-TPATLDDLQAATGLTLPDLQTALVMLQLLGLAEEVG 352 Query: 356 GGYVRL 361 G + R Sbjct: 353 GRWARR 358 >UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTJ7_CHRSD Length = 371 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 187/372 (50%), Gaps = 14/372 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTGLTLRQAQRF----- 52 M E W L + L + + L R+ R+ Sbjct: 2 MTARE-WCALAHLPKLGARRLAVLRRELAAQGLDDAWPQAWLAAMPAGPRETLRYWLEHP 60 Query: 53 -LSFPRKSIESSLCW-LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL 110 S S+ +L W P+HHL+ +P L D P L+ +G+L AL L Sbjct: 61 AKSPLETSVSQALAWEASAPSHHLLYPGHPAWPALLDEIADPPALLWAKGDLAALEPPGL 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+R + G F L G +I SGLA GIDGVA + AL G S+AVLG G Sbjct: 121 AMVGTRRPTREGSDNAAWFARGLVEAGFSIVSGLALGIDGVAQRTALDAGGRSVAVLGCG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + I+P RHA L LL++GG L+SE P + A +FPRRNRII+GLS GVLVVEAA + Sbjct: 181 VEVIYPPRHAGLYRRLLDEGGLLLSEHPAETRAHARHFPRRNRIITGLSLGVLVVEAAEK 240 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SGSLV+AR ALEQ REVFA+PG + N + G LI+ GA LV ++ILE L W Sbjct: 241 SGSLVSARLALEQNREVFAVPGSLHNVQARGNLGLIRDGAWLVRGRDDILEQLG---QWQ 297 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + + P LLA + TP+DV+ ER+ V +LLELELAG Sbjct: 298 APQAVVASTDDMTEAANAPADPLLALLDTAPTPLDVLVERSELDVGGCQMRLLELELAGQ 357 Query: 351 IAAVPGGYVRLR 362 A V GG+VR Sbjct: 358 AAQVSGGWVRRA 369 >UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIP5_MEIRU Length = 337 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 155/353 (43%), Gaps = 25/353 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCW 66 L L + + + + V L A + + E Sbjct: 5 LALALTPQIGPQRLQQALPTDLSVEAVADV------LGPEIAAGYARTLQSGLAEQERAQ 58 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 + LI E YP L P L+++GEL + +VG+R S + W Sbjct: 59 AARLGVRLIGLWEEDYPEVLRHLESPPTVLYLKGELP-PSERNIGIVGTRKASPWATAWT 117 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 LA G+ I SGLA GID AHK AL G ++ VLG+ ++ +P ++ LA + Sbjct: 118 HKVARELAEAGIGIISGLALGIDAAAHKGALDGGGYTLGVLGSAIDHFYPAQNRALAERM 177 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 ++SEFPL PP A FPRRNRI++ S+ VLVVEA +SGSL+TA+ A E GR+ Sbjct: 178 S-----VLSEFPLGTPPQAGLFPRRNRIVAAFSRAVLVVEAGEKSGSLITAKFAAELGRD 232 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 V A+PG G+ S G + LI+ GA LV E++L L Sbjct: 233 VLAVPGRPGDTFSLGCNRLIQDGAGLVLNTEDVLNALGMLAPKKQAVQLEGS-------- 284 Query: 307 ALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ++ + + D +A+ G EV++ L+ LEL G + + G Y Sbjct: 285 ---EAKVYRALLELPEALPDDLAQSTGLSTGEVLSVLMMLELKGLVQSSAGRY 334 >UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y394_9BACT Length = 355 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 106/363 (29%), Positives = 176/363 (48%), Gaps = 15/363 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+ + L L + + I + + ++ R A R R++ Sbjct: 1 MNGLELCVWLNGCEGLSANVLQH-VDLSDGPEKIVEKLRRDGIVSQRCADRLEKLARENW 59 Query: 61 E-SSLCWLEQPNHHLIP-ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E LI +E YP +L + P L+ +G + S ++VG+R Sbjct: 60 HGKEIERAENAGIFLISWYSNERYPSRLRGIAEPPLILYAKGNVPDFES-AYSIVGTRRC 118 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + L L+ G+ + SG ARGIDG AH AL+ +GV++AVLG G++ + P Sbjct: 119 TPYGFKVAALIGNALSRAGMVVVSGGARGIDGAAHGGALENDGVTVAVLGTGVDVVWPPE 178 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L ++L + GAL+SE+PL + FPRRNRII+GLSK ++VVE+ L+ G+++TAR Sbjct: 179 HDELFDNIL-RRGALLSEYPLGTCGRTWRFPRRNRIIAGLSKALIVVESPLKGGAMITAR 237 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A+E GR+V+A+PG I EG + LI GA + + ++++ A Sbjct: 238 LAMEMGRDVWAVPGRIDERICEGSNRLILDGASPLVNVADFIDHVSHFGQLDLFA----- 292 Query: 299 YSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ +L + D +D +++R G E++ + EL++ I GG Sbjct: 293 ----PLELGDDERRVLDCLSDQGDLTLDQISKRTGISAVELMRLISELQVQSLIYTSGGG 348 Query: 358 YVR 360 R Sbjct: 349 RWR 351 >UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteobacteria RepID=Q0C098_HYPNA Length = 371 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 115/364 (31%), Positives = 165/364 (45%), Gaps = 8/364 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL ++ ++ A + + R + P I Sbjct: 11 QRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAAR-GKSITIPPADVIAR 69 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + + ++ + YP L A P L + G A+VG+R S G Sbjct: 70 EIDAVAKYGARIVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAG 129 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R L G TI SGLA GIDG AH A+L ++AVLG G++ ++P +H RL Sbjct: 130 RKIARDMAAALGKAGYTIVSGLALGIDGEAHAASLSTG--TVAVLGGGIDHVYPPKHDRL 187 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + Q G +VSE P A +FPRRNRII+GL++G +VVEAA RSGSL++AR A E Sbjct: 188 YAE-VAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLISARVANE 246 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL----HWLPDAPENSF 298 QGREV A+PG +P + G + LI+ GA LV ++LE L P ++ Sbjct: 247 QGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAA 306 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + + + P+D +A AG L+ELELAG PGG Sbjct: 307 HGGGEAIPPSELARVREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGM 366 Query: 359 VRLR 362 Sbjct: 367 AARA 370 >UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0X6_9PROT Length = 369 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 11/361 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 WLRL + + R+ + + + + G+ + S E Sbjct: 9 WLRLSMVHGIGPMLGRRLLAAIGGIEALWSATGDELRAVDGMGQQLVASLSSTHLSQAEQ 68 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHSWY 121 + ++ D +P L D P LF G+ H LA+VG+R S Sbjct: 69 IVKQCAAQQIGILCPDDARWPVALANVEDAPLILFYRGDPVCLSHLPMLAMVGARRASRE 128 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R + + I SG+A GID AH AL+ G++IAVLG GL + + + Sbjct: 129 GRVLTRRWSRYFTAHDIAIVSGMAFGIDAAAHAGALEEQGITIAVLGCGLLALTEEQQRQ 188 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + ++ E+ G ++SEF +FPRRNR+I+GL++ +V+EA +RSGSL+TAR A Sbjct: 189 V-EAIAER-GCVISEFLPAQSARPEHFPRRNRVIAGLAQATVVMEADIRSGSLITARLAG 246 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GR+VFA+PG + G H LI+ GAIL+ EE+L L Y P Sbjct: 247 EYGRDVFAVPGSVLADNHAGCHRLIRDGAILLERAEELLVQLGLHADKTTQLHAGKQYHP 306 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + E +D++AE G +PE+ LL LEL G I +PG L Sbjct: 307 A----DAEEAGILMAMRGEAVHLDLLAETCGLTLPELSPILLRLELQGVIERLPGSRYLL 362 Query: 362 R 362 Sbjct: 363 A 363 >UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Selenomonas RepID=C4V2Y4_9FIRM Length = 369 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 157/339 (46%), Gaps = 19/339 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ-------AQRFL 53 M D L+ + M ++ + I ++ + + Sbjct: 7 MGDRWYLAALLRCPQVGSVRMRKLLAVYSSAKEIWSMSAHALRAAGVLTDVVADVLAQHI 66 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 E + + ++ + + YP L D P L+ G L ++++V Sbjct: 67 QSDPHLPERLEESCRRLDVAVVTMEDKRYPIVLREIFDPPLVLYCRGTL-LPDVRRISIV 125 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YGE F E LA GVT+ SG ARGID AH+ AL+ G ++AVLG G++ Sbjct: 126 GARKFSGYGEAAALEFAEHLAAAGVTVVSGAARGIDTRAHRGALRS-GRTVAVLGCGVDV 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + RL A + GGA++SE+ PL FP RNRIISGL++GVLVVEAA RSGS Sbjct: 185 AYPSENRRLLAEICTSGGAVLSEYAPGTQPLPMFFPARNRIISGLAEGVLVVEAARRSGS 244 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA AL +GREV+A+PG I +P S G H LI+ GA LV P EILE + Sbjct: 245 LITAEMALSEGREVYAIPGSIYSPQSGGCHNLIRAGARLVESPREILEEMHLVESPRRSV 304 Query: 294 PENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA 331 + + + + +D + + Sbjct: 305 RTQ---------LTPEEAHIYQVLSFDHALTMDEIIDSL 334 >UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q945_9SPIR Length = 426 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 95/415 (22%), Positives = 164/415 (39%), Gaps = 60/415 (14%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS---- 59 + L I + + + + +I + L + + +F + Sbjct: 11 YLIALNQIDKVGDKRISELINHYESVENIFEDKEENIKDLLKKKFKSQIGNFYKNEILDK 70 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 71 ANEIVNKSRDYGIGILSLFDEEYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPA 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 ++ L++ +T+ SG+A+G+D AH A+ + AVLGNG++T++P + Sbjct: 131 NESRKYSFELASKLSSLNITVVSGMAKGVDREAHLGAISSLVNTAAVLGNGIDTVYPSEN 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 ++ L+E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T Sbjct: 191 LKIYNKLIEK-GIIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDY 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL--------- 290 AL QGR+V+ P N G H L K GA + ++ILE+ Sbjct: 250 ALNQGRDVYIAPYDEKNNAYFGNHKLYKDGAKIAYGVQDILEDFDSIFSNDDDYLKMKLK 309 Query: 291 -------------------------------------------PDAPENSFYSPDQQDVA 307 D + ++ Sbjct: 310 YFEGGDISNKSKEKNKKEENREKKENKKYKEQTAEINKKHDKKNDNKIKEKNNELISNLN 369 Query: 308 LPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L + + +D + E + V + L++LE+ G I + G Y + Sbjct: 370 NEETSLYNIIKKSDKIHIDDIVEESNIKVHTAASVLMQLEIKGIIKQLSGKYYTI 424 >UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus RepID=C7HUU2_9FIRM Length = 359 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 104/361 (28%), Positives = 181/361 (50%), Gaps = 9/361 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-FPRKS 59 M ++ L I +L ++ + + D L+ + ++ S ++ Sbjct: 1 MDKKDLLLYFNFI-NLQNKIILDFCENLDMDNFFDLDRKIFENLSKKNKEKIFSSKNLEN 59 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ + + + + YP L D P + +G L +A VG+R + Sbjct: 60 FKAYRQKVFNGPYKISTIYDDNYPINLSYIDDRPALFYYKGNLEKEDKNAIAFVGARKCT 119 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG+ + E + SGLA GID ++HK +L+ N +I V+G+GL+ I+P+ + Sbjct: 120 DYGKWACKKIVEGFKDTNIRTVSGLAYGIDAISHKVSLENNIKTIGVIGSGLDIIYPKAN 179 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + E+ GA++SEFPL+ PP AYNFPRRNRIISGLSKGV V+EA +SG+++T Sbjct: 180 KYLYEKI-EEKGAIISEFPLETPPNAYNFPRRNRIISGLSKGVCVIEAKEKSGTMITTNF 238 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 AL+QGREVF LPG I + S+G + LI++G+ LV + +I++ ++ + + Sbjct: 239 ALDQGREVFCLPGNINSIYSKGCNKLIQEGSKLVMDASDIIDEIEDFKKINEKKTKLNLD 298 Query: 300 SPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D+ + ++ + D+ + D +++ + EV L+ LEL +I + Sbjct: 299 GLDKDTLN-----VVKYIIDKPSSNADEISQNLCMSIEEVNYILIFLELNDYIENMGNNE 353 Query: 359 V 359 Sbjct: 354 Y 354 >UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2K2_9GAMM Length = 301 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 124/296 (41%), Positives = 161/296 (54%), Gaps = 2/296 (0%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L ++ YPP L D P L V G L QLA+VG+R S G + Sbjct: 8 LRAAGTEVLSLADPLYPPLLKTIPDPPPVLHVRGNPMLLARPQLAIVGARRASAAGLQAA 67 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 G+ +TSGLA G+DG AH+ AL G ++AV+ G+ TI+P RH L + Sbjct: 68 HKLAVAAVRAGLGVTSGLALGVDGAAHRGALSAGGDTVAVMATGIETIYPHRHEPLGQEI 127 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 G LV+EFP PL Y+FP+RNRIISGLS GVLVVE+AL SGSL+TA A+EQGRE Sbjct: 128 ASS-GCLVTEFPPGTKPLPYHFPKRNRIISGLSLGVLVVESALPSGSLITATSAMEQGRE 186 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 VFALP I + G G LI+ GA +V E+ILE L L P + + Sbjct: 187 VFALPWSISHKGGAGCLSLIRDGAKMVLGIEDILEELDSLFG-LQQELSQVSTIPSPESI 245 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + LL +G EV +D + +G PV +V+ +L LELAG + PGGY+R R Sbjct: 246 SEQDCLLLELLGFEVISLDQLVVASGLPVGQVMGELSSLELAGRVNRCPGGYIRSR 301 >UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAQ3_EUBR3 Length = 359 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 160/359 (44%), Gaps = 11/359 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK-SIES 62 L S++ + + + + T + L +E Sbjct: 5 YWLTSLTDISNAKKKLLHDCSITAEKLFFMPKNELFDILFFTDDDRKIILESRASYDVEK 64 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +Q + + + E YP +L + P +LF G L +A+VG+R S YG Sbjct: 65 EWILFQQKDIGFVTMEDEAYPDKLRNIHNPPYSLFYIGALPDKSRKSVAIVGARGRSAYG 124 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ L+ +G+ I SG+ARGID AH L+ G + AVLG+G +T +P+ + L Sbjct: 125 CEVAKVLAAALSRQGIQIISGMARGIDRDAHMGCLEAGGNTYAVLGSGADTCYPKENRFL 184 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GG ++SE P FP RNRIISGLS V++VEA RSGSL+TA A+E Sbjct: 185 YDKIKLSGG-IISELMPGTDPQKMFFPMRNRIISGLSDIVVIVEAKKRSGSLITADFAME 243 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++V+ +PG I + S G + LIKQGA ++ +E + ++ E + Sbjct: 244 QGKDVYVIPGRITDTLSYGCNSLIKQGAGIIYNIDEFVSDITMTG-----FTECTQMDFR 298 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + + + + ++++ + E+ L +L G++ Y Sbjct: 299 KNILDKKEALVYSLLDFCPIAIGTLSQKVPYELSELFEVLEDLIQKGFVKETIPNYYIR 357 >UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS59_LAWIP Length = 421 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 166/372 (44%), Gaps = 36/372 (9%) Query: 4 TEIWLRLM--SISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKS 59 E W L L G ++ +Q G+ ++ LS ++ Sbjct: 29 KEFWASLALKYTKGLGGRTYKKLLTSFGSAFEALQQVKKWKQLGIPSDKSLGILSDSWRA 88 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YP L +D P L+ G++ L + +A+VG+R Sbjct: 89 GAKKEWEAVRGCYGTILLWTDPRYPNLLKEISDPPLFLYCLGDISLLENPCIAIVGTRKC 148 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R R F + LAT G+T+ SG+A GID AH +++ G +I VLG+G+N +PR+ Sbjct: 149 SIEGIRVTRAFAKGLATAGITVVSGMALGIDREAHLSSIDFPGKTIGVLGSGINISYPRQ 208 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 ++ + LL G L+SE+ P FP RNRIISGLS GVL+VEAAL SGSL+TAR Sbjct: 209 NSDVRE-LLVNKGLLISEYAPGTRPEPGFFPTRNRIISGLSLGVLIVEAALHSGSLITAR 267 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-------------- 284 ALEQ R V+A+PG IG+P +EG LI++GA + ++IL +L Sbjct: 268 LALEQNRSVYAIPGAIGSPFAEGCQDLIREGARPIFSVDDILHDLSESLKGFINQYNKQD 327 Query: 285 ----------------FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVA 328 L D + +++ + E +D + Sbjct: 328 IIYKEKKEGLEEQDIMLSLPASNDKTTVINKQSQYKTFGKIERQIIDIIRLEPKDIDQLC 387 Query: 329 ERAGQPVPEVVT 340 + P E+ Sbjct: 388 QLLQLPAEEISP 399 >UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMX7_9FIRM Length = 365 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 122/373 (32%), Positives = 170/373 (45%), Gaps = 22/373 (5%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-------QAQR 51 M + L L + + + + + +R Q Sbjct: 1 MDARQDFYLAALAQCPGLGSRRLGLLLETGRDAVSLWQMPALEMSRLVRMPQGLVEALQS 60 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 F ES +Q HL YP L P L+ G L +A Sbjct: 61 FRRTHPDLPESLAESCQQRGVHLCTIRDASYPYLLKEIFSAPPVLYFRGTLEPEARR-VA 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VGSR S YGE F E LA G+T+ SG ARGID +H+ AL+ G ++AVLG G+ Sbjct: 120 IVGSRRLSPYGEALALEFGEQLAAAGLTVVSGAARGIDTRSHRGALKT-GRTVAVLGCGI 178 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P + RL + E GGA++SE+ V PL FP RNRIISGLS+G LVVEAA RS Sbjct: 179 DVAYPAENRRLLMEIAESGGAVISEYGPGVQPLPAFFPARNRIISGLSEGTLVVEAAARS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TA AL +GREV+ALPG + + SEG H LI+QGA LVT+P +ILE++ Sbjct: 239 GSLITAELALGEGREVYALPGSVFSKMSEGCHHLIQQGASLVTKPCDILEDMGLV----- 293 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA-GQPVPEVVTQLLELELAG 349 + Q+ + + + + D + +P + LL++EL G Sbjct: 294 ----QKVAAKKQKSMTPDERRIYQVLSFDHPLSADEILMSLPDGEMPSLSFTLLQMELKG 349 Query: 350 WIAAVPGGYVRLR 362 I R Sbjct: 350 LIIENELHAYRRA 362 >UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBJ9_9FIRM Length = 385 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 13/352 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-----FLSFPRK 58 W+ +S + L ++ S + ++ QR Sbjct: 19 YRYWMTCLSGAGLGNRSKRQLLDCYKSPSAVYRASKEELDKLGFLRQREVDALIFQRGSW 78 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVVG 114 + + + L+ D E YP L D P LF G + + S AVVG Sbjct: 79 DLREEYERFLEADMGLVTLDMEGYPANLRMLHDAPFGLFFRGRISSGVSSGSSRLAAVVG 138 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S YG+R L I SG+ARGIDG+A + L G +IAVLG G + + Sbjct: 139 SRTPSAYGKRVAEDLSAILTDYHYQIVSGMARGIDGIAQTSCLDTGGQTIAVLGCGADIV 198 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + L ++E G L S++P PL+ +FP RNRIISGL+ VLV+EA RSGSL Sbjct: 199 YPKENWILYDRIVET-GCLFSKYPPQTAPLSRHFPARNRIISGLASVVLVIEARRRSGSL 257 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA ALEQG++V+ LPG I +P S G + L+ QG A +T+ ++++++L+ Sbjct: 258 ITADFALEQGKDVYTLPGRITDPMSAGCNELLHQGAAQPITDYDQLIDDLELIAGM--GH 315 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + +L + +D + +R+ + V L EL Sbjct: 316 FQPREDLRRLPPLTREQEKLYQCLDFYPMDLDQLVKRSELDYLQAVRVLTEL 367 >UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Idiomarina RepID=A3WIH9_9GAMM Length = 347 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 130/326 (39%), Positives = 173/326 (53%), Gaps = 8/326 (2%) Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALF 97 Q + R Q S R + ++ WLE N ++ + YP L P LF Sbjct: 29 SEQLEAIEDRCLQSIKSVQRAYVLQAMHWLENDNCGVVGWFDDQYPKLLRTIERPPMVLF 88 Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +G L +A+VGSR S YG + A G+ + SGLA GID AH+AAL Sbjct: 89 YKGRTELLSQASVAMVGSRKASHYGIQVTDQLARECAQSGLAVVSGLAMGIDAAAHRAAL 148 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G +IAVLG G++ I+PRR+ L L+ G ++SEF P +FPRRNRIISG Sbjct: 149 DY-GATIAVLGTGIDQIYPRRNRELYE-LISHQGLIISEFSPGTPARMDHFPRRNRIISG 206 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 +SKGV+V+EAA RSGS+ TA AL +GREV A+P + EG HWL+K+GA L+T Sbjct: 207 MSKGVVVIEAARRSGSISTALSALREGREVGAVPNSVFAKSQEGCHWLLKEGAHLITCAS 266 Query: 278 EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 +IL A E S + L L ANV ++ +D + ER G V E Sbjct: 267 DILSWFDIS------ASEPSQQTRCTIPKHLANNPLFANVSNDPVSLDELVERTGLSVAE 320 Query: 338 VVTQLLELELAGWIAAVPGGYVRLRR 363 V QLL LEL G I A+PGGY+++ R Sbjct: 321 VSEQLLLLELEGLITAIPGGYIKVGR 346 >UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacteria RepID=C3JBR0_9PORP Length = 368 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 168/369 (45%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF-----LSF 55 M L L I + + RI V I + G+ +R LS Sbjct: 1 MGKAAYLLALSRIEGVGAITLRRILDAVDDVCDIFSNPAILEGVAPALYRRVVSHLSLSE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +S + + ++ + YP L D P A F G ALHS ++VVG Sbjct: 61 LLESAKREVEEAKRKHIDTFGLGDVDYPQLLAECADPPPAFFYFGNRDALHSPHCISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +R S YG + + E LA + + + SGLA GID AHK AL + +I VL +GL+ Sbjct: 121 TRRASRYGLKAVEVLLEDLANKLPDLVVISGLAFGIDVKAHKVALDLGIPTIGVLAHGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P H +A ++++GG L SE+ ++F RNRI++GLS LVVE+A R G Sbjct: 181 RIYPAAHRNIAIEMVKKGGLL-SEYSWGSKVERHHFVGRNRIVAGLSHATLVVESADRGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLP 291 SL+TA A GREVFA+PG I + S G + +I AI + I+ L +G Sbjct: 240 SLLTAAMASGYGREVFAVPGRITDSTSVGCNRIIASMQAIPAVNADSIISVLGWGKSNGG 299 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + +S Q P L+ V +E + + R G E+ +L LE G+I Sbjct: 300 EEESSSSLFVPQDLPDDPVLRLI--VEEETIHFNDLLMRLGMSAAELSNKLFTLEFDGFI 357 Query: 352 AAVPGGYVR 360 +PGG Sbjct: 358 KPLPGGLYA 366 >UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD44_9FIRM Length = 305 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 5/289 (1%) Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 I YP + + P L+V+G L +AV+G+R S YG + Sbjct: 18 QIRCIEKSDPEYPQIMKQYSSMPAKLYVKGRLPDPKRRTVAVIGARMCSPYGRMQAFRYA 77 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 + L+ GV I SG+A GID HK AL+ + AVLG+G++ +P+ + +L +L + Sbjct: 78 KALSVAGVQIISGMALGIDSEGHKGALEGKMPTFAVLGSGVDVCYPKSNRKLYERILWEN 137 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G ++SE PL P++++FP RNRIIS LS VLVVEA SGSL+TA ALEQG+ V+A+ Sbjct: 138 GGIISECPLGSGPVSWHFPARNRIISALSDAVLVVEAKENSGSLITAGFALEQGKMVYAI 197 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPF 310 PG + + S G H LI GA + PE +LE L + + E + +A Sbjct: 198 PGAVTDELSRGCHKLIYDGAGIAYCPEIMLEELGISMEKVTQNGEKNNL-----GLARDL 252 Query: 311 PELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + D + + G +V L+EL L G I Y Sbjct: 253 NMVYSCLDLRPKNPDYIVRKTGFSPAQVSNCLVELTLRGLIRESGRHYY 301 >UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN9_9CLOT Length = 374 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 107/370 (28%), Positives = 173/370 (46%), Gaps = 11/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E++L L SI + +++ + K + + ++ L + + + + Sbjct: 1 MQEREMYLFLCSIYRISQEEIDILKAQFGKLEVLMYLDEKEILKNKNLNSKLLKNIVKYR 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVG 114 IE+ LE+ + + + YP L P LF +G++ L +AV+G Sbjct: 61 SHSRIENIKGVLEEKDIQYVCFSDDDYPESLKHIQMPPPILFYKGDISILDHRNNIAVIG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SRA + YG R + + L+ G+ I SGLA GID AH A + G ++AVLG+ ++ Sbjct: 121 SRAPTNYGLYCVRKYAKELSDIGMDIVSGLALGIDSEAHLACMNGRFGKTVAVLGSPIDN 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I P R+ ++A +LE GG +VSEF L NF RNRIISGLS VLV+EAA +SG+ Sbjct: 181 ILPSRNRKIADKILENGGIIVSEFFLGSKVHPLNFSFRNRIISGLSVAVLVIEAAQKSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 T A +QG+ VFA+ G I +P S G +I +GAI T E I + L+ Sbjct: 241 KRTFDYAGDQGKTVFAMTGRINDPKSRGCIDMIIEGAIPFTSVENIFRDKSVFLNAKEFC 300 Query: 294 ---PENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 D + + E+L + +D + G + + + + EL + Sbjct: 301 TLNNCKDSIEYDIKSLNYEKKEILELIKRQGNIKIDDICNYTGMDIKTINSNVNELLIDD 360 Query: 350 WIAAVPGGYV 359 +I + Sbjct: 361 YIIEMENKTY 370 >UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus RepID=C5D8V4_GEOSW Length = 294 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 7/289 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK- 58 E + L + R+ S + + + + L+ +Q +F Sbjct: 6 RERLIHLHHCRGAGWKTIHRLLEIDPTFSSVFTLPSSALRTRIPLSSQQYTQFFQDLHSP 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 IES + + N H+I YPP L P L+ +G + L S +++VG+R Sbjct: 66 HIESMIKTYKDKNIHVITIFDSDYPPLLKHIYKPPWVLYAKGNIRLLSSFKMISIVGTRQ 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + R L I SGLA GID +AH+ ++ G +IA++ G I+PR Sbjct: 126 PTKEGIQSLRQLVPPLVANDWVIVSGLAVGIDTLAHEMTIENGGHTIAIIAGGFEHIYPR 185 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ RLA L+ G ++SE P V P ++FP RNRIISG+S G +VV+A RSGSL+TA Sbjct: 186 QNKRLADQLM-GGHLILSEHPPHVRPQKWHFPLRNRIISGISLGTIVVQAKERSGSLITA 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 ALEQGREVFA+PGPI S+GP+ LI+QGA LV +I E + Sbjct: 245 LLALEQGREVFAVPGPIFLEQSKGPNMLIQQGAKLVHSATDIFEEFSYI 293 >UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella RepID=D1VYZ9_9BACT Length = 377 Score = 309 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPR--KSIE 61 + L I+ + M+++ + + + + + Q E Sbjct: 11 IALTRINYFHLTGMLQLYRRLGSATAVIEHRRNIRDVLPDASPKLVQSLQQLDEPLHRAE 70 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + + E YP +L D P LF +G ++ + VVG+R ++ Y Sbjct: 71 IELQWDLENGVMPLCMNDENYPQRLRQCDDAPLMLFYKGNINLNQRRVICVVGTRRNTVY 130 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L + + SGLA G+D +AH+ ALQ ++ VL +G++ ++P RH Sbjct: 131 GEDLIRRFMRELRQLCPQLLVISGLAYGVDIIAHRQALQNGYPTVGVLAHGVDYLYPARH 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 191 KQTADEMVKKGGLL-TEFLTQTNADKVNFVRRNRIVAGISDACVVVESAAHGGGLITASL 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLH-WLPDAPENS 297 A REVFA PG IG+ SEG + LI+ A L++ ++ ++++ + L A + Sbjct: 250 ARTYNREVFAFPGNIGSQYSEGCNNLIRDNVAGLISNADDFVKSMNWDDDVKLQRAQQVG 309 Query: 298 FYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ ++++ + +++++ +A P+ + L LE+ G + A+PG Sbjct: 310 IERQLFPDLSAEERQVVSALKKHNDLQINMLSVQADIPIAHLTAILFSLEMKGVLKALPG 369 Query: 357 GYVRL 361 G L Sbjct: 370 GMYHL 374 >UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIX1_9BACT Length = 362 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 16/345 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTG-LTLRQAQRFLSF- 55 M + WL L S L + + + L Q G L + F Sbjct: 1 MERYKAWLCLKSAPLLGTKGTLELLQSFPDPQEFVGNPSHPLYQNGKLKPATIKHLREFT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVG 114 + + L +E+ + YP L D P L+ +G+L +AVVG Sbjct: 61 LPEDNKRILTLMEKHQLQYLCLTDPDYPAALKEIFDPPLILYYQGDLTGTLKDLCIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG R L +GV + SGLA GID +AH+ AL+ +IAV +GL+ I Sbjct: 121 TRKPTSYGLEMCRKLLSPLCAKGVNVVSGLAMGIDTIAHQTALKAKAKTIAVFASGLDNI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + LA ++ E GALVSE+ +NFP RNRIIS L+ VLVVE +L SG++ Sbjct: 181 YPPMNKTLAENICE-NGALVSEYEPGSKLERWNFPTRNRIISALANAVLVVEGSLNSGAM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA+ A+EQ + ++ALPG I N ++GP+ LI+QGA L++ ++L +L Sbjct: 240 LTAKFAIEQNKPLYALPGNINNRNAQGPNLLIRQGATLISSANDLLMDLGLVPSPKEQM- 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPE 337 +++ L + D + G + Sbjct: 299 ------ELIPELSSEEQTLYDILSSAQKELTFDEFMLKTGLGFGK 337 >UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CHW7_9FLAO Length = 412 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 107/410 (26%), Positives = 165/410 (40%), Gaps = 51/410 (12%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR---QAQRFLSF 55 M++ E +RL I L + S + + G LR + Sbjct: 1 MIEKELIALIRLQLIPGLGPIGARNLIAICGSPSAVFSQTKMLAGNGLRHNLLSSLEEEA 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L + E+ + YP L D P L+ G ++ ++VVG+ Sbjct: 61 YLRRAQAELRFAEKRGARCLGCLDPDYPAGLRECADSPLVLYTRGRINFGRHPLVSVVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG F +A I SG A GID A A++ +IAV+ +GL++++ Sbjct: 121 RSMTGYGRETCEAFIAGIAPANPIIISGFAYGIDICAQSTAMRYGLQTIAVMAHGLDSLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + +L+ GG L +EFP P +F RRNR+I+G+S +VVE+ R GSLV Sbjct: 181 PASHRKYRDALVANGGFL-TEFPSGTPAEPGHFLRRNRVIAGMSPATVVVESGERGGSLV 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPD-- 292 TA A REVFA PG + +P S G + LI+ Q A L+T E L + + P+ Sbjct: 240 TADLAFGYDREVFAFPGRVSDPQSAGCNALIRTQKAQLLTNAREFLLAMDWEEAQSPETK 299 Query: 293 -----------------------------------------APENSFYSPDQQDVALPFP 311 N +P D+ Sbjct: 300 GSGGLVDAGSLSKTRNPVETGNFRETKNPAETGNPGVKGGLPNPNRAVNPVPGDLDPTEN 359 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 L + +D VA R V E V+ L LE+ G + ++PG R Sbjct: 360 TLARCLAESGCMHLDEVAVRCQLGVSEAVSGLFNLEMRGLVRSLPGKLFR 409 >UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYZ2_9SPHI Length = 371 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 94/371 (25%), Positives = 181/371 (48%), Gaps = 11/371 (2%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSF 55 M ++ + L I + G ++ + + A +L+ + + + Sbjct: 1 MNNSSLYSIALNLIDKVGGVKARQLLSYCGSAEAVFKTPKAKLLKIPMVGNKIVSLIMQK 60 Query: 56 P-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + E+ + + + ++ YP +L D P +++G+++ +A+VG Sbjct: 61 DILQQAEAEVEKAYKQDVQIVAYTDAHYPVRLKQYADAPFVFYIKGKVNLNAERAVAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +RA S YG+ + + L I SGLA GID AH+A+L+ +I V+ +G++ + Sbjct: 121 TRAASEYGKTFTEELVKELKPYQPLIVSGLAYGIDIAAHQASLKYGLPTIGVMASGIDVV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H A +++Q G +++E P A FP RNRII+ L+ V+VVEA + G+L Sbjct: 181 YPTPHLGTARQMVQQQGGVMTEARFGTQPDARKFPARNRIIAALADAVVVVEAKVSGGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A + ++VFA+PG I SEG + LIKQ A L+T+ +++ + + L+ + Sbjct: 241 ITANIANDYHKDVFAVPGDIHRKTSEGCNNLIKQHKAHLMTKAKDVAYIMNWELNGKNKS 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV---TPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + A E++ + + +D ++ + P+ +V LL LE+ G+ Sbjct: 301 VQQSLLFNELPENAE-EKEIVVLLQKQPKKTLSLDEISWQLKMPLSKVSACLLNLEIQGY 359 Query: 351 IAAVPGGYVRL 361 + ++PG L Sbjct: 360 LKSLPGKKFTL 370 >UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYG1_BRAHW Length = 416 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 92/414 (22%), Positives = 163/414 (39%), Gaps = 61/414 (14%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSIES--- 62 + L I + + + + +I + L + + +F + I Sbjct: 2 IALNQIDKVGDKRISELINHYESVENIFDDKEENIRELLEKKFKSQIGNFDKNEILDKAN 61 Query: 63 -SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 62 TIVEKSKNYGIGILSLFDEDYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPTNE 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 ++ L++ +++ SG+A+G+D AH A+ + ++AVLGNG++ ++P + + Sbjct: 122 SRKYSFELASKLSSLNISVVSGMAKGVDREAHLGAISSHINTVAVLGNGIDNVYPSENLQ 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + L E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T AL Sbjct: 182 IYNKLSEK-GLIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDYAL 240 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP----EEILENLQFGLHWLPDAPE-- 295 QGR+V+ P G H L K GA + E+ ++ + Sbjct: 241 NQGRDVYIAPYDEKKSCYFGNHKLYKDGAKIAYNYMDILEDFDSIFSNDDDYVKMKLKYF 300 Query: 296 -----------------------------------------------NSFYSPDQQDVAL 308 + Sbjct: 301 EGGDIKSKSLKNDSIKSENNNSNNKDKKETKKEEVKDKKEKKKNKISKQNDESIISALQE 360 Query: 309 PFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L + ++ +D V E + V V + L++LE+ G I + G Y + Sbjct: 361 DEALLYNIIKQNDKIHIDEVIEESKMKVQAVTSMLMQLEIKGIIKQLSGKYYTI 414 >UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKH3_RHOVA Length = 487 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 112/383 (29%), Positives = 169/383 (44%), Gaps = 27/383 (7%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + LRL+ + ++ + + + R + + + + E+ Sbjct: 108 EKRDRLRLIRTPHIGTVTFWQLIAHFGSAAAAIDALPEFVKHGSRVSPKSV-PSIGTAEA 166 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + L+ YPP L P L+++G+ +VGSR S G Sbjct: 167 EMERAAAAGLTLVAVGEAGYPPLLAEIEAPPPLLYIKGDPRIWQRPAFGIVGSRNASGAG 226 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ L+ G+ + SGLARGIDG AH+ AL + AVL GL+ I+P H L Sbjct: 227 LKFTAEISAELSRLGLLVVSGLARGIDGAAHRGALPFG--TCAVLPGGLDRIYPPEHLGL 284 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 AA + Q G L+ E P A +FPRRNRIISG S GVLVVEAA RSGSL+TAR A E Sbjct: 285 AADI-AQNGLLIGECPPGFVARAQDFPRRNRIISGASLGVLVVEAAERSGSLITARLAGE 343 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL--------------- 287 Q REVFA+PG + + G + LIK+GA+L T E+I++ L+ L Sbjct: 344 QSREVFAVPGHPLDTRAAGTNRLIKEGAVLTTSAEDIVDALKGKLVHWARFGVEVPQPQR 403 Query: 288 --------HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVV 339 AP + + ++ + +D + G+ EV Sbjct: 404 APKLAAHDDGPVRAPAGAKGGDGLASLDATIASVMQLLSFSPIAIDDICRMTGKQTREVH 463 Query: 340 TQLLELELAGWIAAVPGGYVRLR 362 ++ L+LAG + ++ LR Sbjct: 464 AAIMSLDLAGRLERRGSSHIVLR 486 >UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KWN4_9FIRM Length = 300 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 11/300 (3%) Query: 67 LEQPNHHL----IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +E+ N L + E +P +L D P L+++G L + ++G+R + YG Sbjct: 1 MEKKNIELSIRELLPFQEDFPKRLSEIPDSPECLYLKGFLPKEGEHTVGIIGARDGTEYG 60 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R +TLA +G+ I SG+A GID AH+ AL+ G + AVLG G+N +P + RL Sbjct: 61 KDIARSIAKTLAKKGIGIVSGMAYGIDSAAHEGALEGKGKTYAVLGCGVNICYPSCNFRL 120 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ E+ G ++SE+PL PPL ++F RNR+ISGLS +LVVEA +SG+ +T ALE Sbjct: 121 YENI-EKNGGILSEYPLHSPPLPHHFVERNRLISGLSDVILVVEAKEKSGTFITVDRALE 179 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++VFA+PG I + S+G + LI++GA + T +IL E P Sbjct: 180 QGKQVFAVPGRIVDRLSQGCNRLIREGASVCTSAGDILSYFSLEAEKEESKEEEIKNFPK 239 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + + +G E + E P + L+ELE+ G+ V Y R + Sbjct: 240 E------KRRIYLALGFESKHFQSLQEELKLPNYMLHRYLIELEVEGYCECVQAAYYRRK 293 >UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacterium RepID=C5VCW3_9CORY Length = 405 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 159/382 (41%), Gaps = 23/382 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV-VLQQTGLTLRQAQRFLSFPRKSI 60 + W L + ++ + + I +++ L A+ + Sbjct: 10 ERRQAWAYLSRVFEGPSRELTNLLNNRRDPEAIAQGIRRRESWLGDILARTHTRYQDDRA 69 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQ----------------LLATTD---YPGALFVEG- 100 ++ L + L+ D +P + L + + P AL+V G Sbjct: 70 KADLTTMAAIGGRLVTPDDPEWPAEPLDAAFRFAASGKSDTLRSYQEDAVPPHALWVRGS 129 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 L L + +++VGSRA S YG RL L TI SG A GID AH L Sbjct: 130 NLRQLCAQAVSIVGSRAASNYGSHAARLISAGLIDHHWTIISGGAFGIDSAAHTEVLARG 189 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +IAV GL+ +PRR+ + ++ + GALVSE+P P + F RNR+I+ LS Sbjct: 190 GTTIAVQACGLDRPYPRRNHDMLTTIAQHNGALVSEYPPGATPQRHRFLTRNRLIAALSS 249 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +++EAA RSG+L T A G+ A+PGPI S G H I+ G A +V +E+ Sbjct: 250 GTVIIEAAWRSGALNTLSWAAAFGKITMAVPGPITTAQSLGCHERIRNGDAAMVCSADEV 309 Query: 280 LENLQFGLHWL-PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + L + E F + Q ++ + G P D +A AG + Sbjct: 310 RQLLAKIGDIDVGEQYEMQFAATPVQKLSRNEMRIYDATGPRPIPTDQLAHDAGLTIGLT 369 Query: 339 VTQLLELELAGWIAAVPGGYVR 360 V LL L G + + R Sbjct: 370 VHLLLSLAQQGLVERNGNAWQR 391 >UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGD0_ANOFW Length = 295 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M D E + L + + R+ + + + QQ L Q+ + Sbjct: 1 MYDTTRERLIHLHHCRGIGWKSIARLLQADPSLASVFHLSSQQLQRLLPIPQKHFTAFFH 60 Query: 59 SIE-----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL-AV 112 + + E+ N H++ + YP L D P L+ +G + L ++ +V Sbjct: 61 DLHCHKLKRMIKTYEEQNIHIVTIKDDGYPEWLKHIYDPPWVLYAKGNVALLKRKKIISV 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G + L G + SGLA+G+D AH+ L+ +G +IAV+ GL Sbjct: 121 VGTRTPTRQGIAAMHIVLPPLVQNGWIVVSGLAKGVDAEAHRLCLRHHGETIAVIAGGLY 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L L ++SE+P V P ++FP RNRIISGLS G LVV+A RSG Sbjct: 181 YMYPPENESLFRQ-LATTQLIISEYPPFVRPQTWHFPMRNRIISGLSLGTLVVQAKERSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 SL+TA AL+QGREVFA+PG I + G + LI+QGA L+ E+I E + Sbjct: 240 SLITAHFALQQGREVFAIPGDITTKEALGTNRLIQQGAKLILSSEDIEEEFRHLF 294 >UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPW6_9FIRM Length = 366 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 99/367 (26%), Positives = 145/367 (39%), Gaps = 12/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSF 55 M T WL L + + + L+ A++ L Sbjct: 1 MDKTLAWLWLADAVGSACQYARELLDLWPDPEELYESLRSGMVAPPFCLSDGAARQLLDT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVG 114 E L ++ D FYP +L D P L+V G+ L+ +VG Sbjct: 61 TPFDYEERLDHCLLSGIEILTPDDAFYPARLREIPDLPLVLYVTGDKACLNGHRYAGMVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + A G+ I SGLA G+D H+AA+ +IA LG ++ Sbjct: 121 TRRPSAYGRQAAYDLSLGAAKEGIVIVSGLADGLDSEGHRAAVAAGTPTIAFLGTAIDKT 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPL-AYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L + E GGA+ SE+P F RNR+I+ ++ V V EA LRSG+ Sbjct: 181 YPAANGPLRRQIEEGGGAVCSEYPPHYKGKTTGTFLARNRLIAAQAEVVCVAEARLRSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPD 292 L T A GR V A+PG I + S G + L++ A + E +I+ L Sbjct: 241 LNTVHHAEGYGRPVLAVPGSIYSAMSRGTNELLRTHRAEPLCEAADIVRQLGLAAG---- 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 A E V+ + A +G +D + G P V+ ELEL G Sbjct: 297 AEEKEPAEFSPASVSADARAVYAKLGPTAQGIDALCAATGLPANRVLAACTELELFGGAQ 356 Query: 353 AVPGGYV 359 A PG Sbjct: 357 AQPGRRY 363 >UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND2_FERNB Length = 333 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 164/337 (48%), Gaps = 19/337 (5%) Query: 26 HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQ 85 + + + +T Q + F + L + + LI E YP + Sbjct: 15 KKLEDIDELISYNKSDFLITPEQIKEF----NDLVHKLEMRLSKGDISLITYWDEEYPEE 70 Query: 86 LLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 L D P +F +G + L AVVG+R + YG++ +F L+ I SG+A Sbjct: 71 LRHIPDPPVFIFAKGNVEFLSYDLFAVVGTRKMTNYGKQVTEMFSTDLSKH-FVIVSGMA 129 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 G+D +AH AL+ +IAVLG G++ I+P+ + RL ++ + G ++SE+ P Sbjct: 130 YGVDSIAHATALRNLRPTIAVLGCGVDYIYPKSNERLYQEII-KNGCVISEYLPWEKPQK 188 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 Y F RNRIISG+SKGVLV EA SG+L+TA+ +EQG+++FA+PG I S G ++L Sbjct: 189 YTFVARNRIISGVSKGVLVTEAGTDSGALITAKFGVEQGKDIFAVPGDIFKSTSTGTNYL 248 Query: 266 IKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 IK GA LVT P EILE F H ++ LL + + Sbjct: 249 IKNGAFLVTHPSEILEYYGFKEHRK------------IIELNYDEKLLLEALETN-LNPE 295 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++E+ +P+ E++ L +EL G + V G Sbjct: 296 QLSEKISKPLSEILLLLTIMELKGLVYRVEDGTYARA 332 >UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH2_PETMO Length = 330 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 16/318 (5%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + + ++ I SL ++ I E YP L D P L+ G+ Sbjct: 29 SPTLFKEEFEENKRKIVQSLDKIKDLGI--ITYWDEEYPDLLKNINDPPVILYYFGDPSL 86 Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 L S +++VG+R + YG+ + L++ T+ SG+A GID +A + A +I Sbjct: 87 LKSKTVSIVGTRKTTDYGKSICIEITKALSS--YTVVSGMAYGIDSIAQRNA----KKTI 140 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVLGNG++ I+P+ + L + E+ G ++SE+ Y FP RNRII+ LS+ +V Sbjct: 141 AVLGNGIDIIYPKSNESLYNKIKEE-GLIISEYFPGTRATKYTFPYRNRIIAALSEKTIV 199 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 VEAA +SGSL+TAR AL+ GREV A+PG I S G ++LI GA + + + E Sbjct: 200 VEAAKKSGSLITARYALDYGREVLAVPGDITRLNSYGTNYLIYSGATPIISIQHLKELFG 259 Query: 285 FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 + + EN + ++L + + +D + E + V +++ +++ Sbjct: 260 ITNLEVENYDEN-------PEEMELKEKILKLINEGNNNLDSLCETLKEDVSAILSTIMQ 312 Query: 345 LELAGWIAAVPGGYVRLR 362 LE+ G ++ G Y L Sbjct: 313 LEIDGKLSQENGTYFTLN 330 >UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria RepID=A1VCL3_DESVV Length = 668 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 113/307 (36%), Positives = 153/307 (49%), Gaps = 6/307 (1%) Query: 5 EIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ--AQRFLS-FPRKS 59 E+W L L L +R+ G +RQ AQ S R + Sbjct: 35 ELWAVLALRHTEGLGARSHIRLIRHFGSAYAAVQRAPHLAGSGVRQQAAQALASGRWRAT 94 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ L + ++ + YP +L + D P L+ +G++ L + L VVGSR S Sbjct: 95 AKAEWDALRACDCGILLWNDPRYPERLRSLPDAPALLYCKGDVALLDNPALGVVGSRLCS 154 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G R LA GVTI SG+ARGID AH A LQ G ++ VLG G++ +P + Sbjct: 155 RQGMRMAAQLARDLACAGVTIVSGMARGIDREAHLAGLQGVGCTVGVLGTGIDIRYPYDN 214 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + + G LV+EF P +FP RNR+ISGLS GVLVVEAA RSGSL+TAR Sbjct: 215 EDLFERMASE-GLLVTEFAPGARPEPRHFPIRNRVISGLSLGVLVVEAATRSGSLITARL 273 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREV+A+PGP+ S G H L+++GA V E+IL +L L A + Sbjct: 274 ALEQGREVYAMPGPVSAQTSRGCHDLLEEGAHAVGSAEDILVDLAPQLLGALRARAEAAG 333 Query: 300 SPDQQDV 306 Sbjct: 334 GVPPAAP 340 Score = 54.5 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 272 LVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAER 330 V EE + ++ ++ P LLA + D VD + Sbjct: 577 PVISDEEGATAVSSASLRATARGVHAVNPDMPKEHGDPESRLLALLRDMGEAHVDDLCRA 636 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +V LL LE+ G + +PG Sbjct: 637 LAMAPGDVSGTLLLLEVQGVVRRLPGMRYA 666 >UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFG2_9BURK Length = 448 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 116/302 (38%), Positives = 164/302 (54%), Gaps = 7/302 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------ 56 + WLRL L + + + I + +A + Sbjct: 10 ELAAWLRLSLAPGLKPAALRLLLSAFGLPAAILQQEHETLAAIAGEAAAHAALAPTGPEF 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + W E P + ++ D YPP LL D P L+++G L LH +A+VGSR Sbjct: 70 DAQLDAVIAWRELPGNQIVTLDDPAYPPALLTMPDPPPLLYIKGRLELLHRRAVALVGSR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F T++ GVT+ SGLA+GIDG AH+ L G ++AV+G G + ++P Sbjct: 130 SATPQGLEDAERFARTISAAGVTVVSGLAQGIDGAAHRGGLDGIGSTVAVIGTGADLVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + Q GA++SE+PL P A NFP+RNR+I+GL GVL+VEAA+RSGSL+T Sbjct: 190 SAHHALARQIAAQ-GAILSEWPLGTPARAANFPQRNRLIAGLVSGVLIVEAAMRSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GR++FALPG I P S G H +IKQGA LV P+E+LE L F AP + Sbjct: 249 ARLANEMGRDIFALPGSIHAPLSRGCHRMIKQGAKLVETPDEVLEELGFAKAAPISAPAS 308 Query: 297 SF 298 Sbjct: 309 PA 310 >UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Tax=Corynebacterium RepID=C8NPM8_COREF Length = 403 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 98/386 (25%), Positives = 158/386 (40%), Gaps = 23/386 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQRFLSFPRKSI 60 W L + + + I V ++ + + + Sbjct: 7 DRLRAWAYLSRVVEGPSVHLQTLLKQGRDPEAIAHAVKHREPWIGDLLRETASRYEWDVA 66 Query: 61 ESSLCWLEQPNHHLIPADSEFYPP-QLLAT------------------TDYPGALFVEG- 100 + L + LI + +P +L P AL+V G Sbjct: 67 QQDLEQILALGGRLITPEDREWPATELDHAFGFAASGMSDHVRTYQDDAVPPHALWVRGG 126 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 +L +L + +A+VG+RA S YG + + L TI SG A G+D VAH AL+ Sbjct: 127 DLRSLTAQAVALVGTRAVSQYGREVTAMIVDNLVPHQWTIISGGALGVDTVAHTTALRAG 186 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++ V GL+ +P + L ++ +GGA+V+E+P PP + F RNR+++ LS+ Sbjct: 187 GTTVVVAACGLDRSYPAHNRGLFEEVVNRGGAIVTEYPPGTPPQRHRFLTRNRLVAALSQ 246 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +V EAA RSG+L T GR A+PGP+ GS G H I+ G A +V +EI Sbjct: 247 GTVVTEAAWRSGALNTLSWCAGLGRVAMAVPGPVTTAGSLGCHERIRNGHAQMVCSGDEI 306 Query: 280 LENLQFGLHWLPDA-PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 L A E ++ + Q ++ + +G VA G + V Sbjct: 307 RSLLGAIGGMDAQAQYELNYAANPIQGLSRNELRVYDALGRHPREAAEVATETGLTLALV 366 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRA 364 + L++L G +A + RL Sbjct: 367 IHLLVDLNSRGLVAREGVRWARLAEQ 392 >UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5 Tax=Anaplasma RepID=D1ASK9_ANACI Length = 378 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 106/363 (29%), Positives = 166/363 (45%), Gaps = 14/363 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ-QTGLTLRQAQRFLSFPRKSIESSL 64 +R+M + + ++ + + G R P E + Sbjct: 19 ACIRIMRTAKIGPIAFQKLIKLYKTPELALDALAHGELGNVGRIC------PEDDAEKEV 72 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHSWYGE 123 + +I YP LL D P + G++ + ++A+VGSR S G+ Sbjct: 73 ELCRKLGARMISMFEREYPQMLLHIYDPPPVITALGDVALLNKNNKIAMVGSRNASANGK 132 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R L+ G SGLARGID H + + ++AV NG++ ++P+ + L Sbjct: 133 RIAYGIAFDLSKAGFVTVSGLARGIDSTVH-SVIFEKMPTVAVTANGIDVVYPKDNLHLY 191 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 +++ GG +V+E P P A FP+RNRIISG++ G +VVEA+ RSGSL+TA AL Q Sbjct: 192 RAIVHNGGVVVTELPFSSLPKASFFPQRNRIISGMAWGTVVVEASRRSGSLITANFALSQ 251 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF-----GLHWLPDAPENSF 298 GREVFA+PG +P G ++LIKQGA LV E+I++ L + L A Sbjct: 252 GREVFAVPGLALDPKYSGSNYLIKQGATLVESAEDIIQALNPGARTIAANSLRHAARRQD 311 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D A +L + T ++ +A ++ +L+ELEL + PG Sbjct: 312 AATDGAGSAAIRRAILQQLSVSPTDIEDLAACTKIGTSTLLAELIELELLRKVHRFPGNR 371 Query: 359 VRL 361 L Sbjct: 372 FAL 374 >UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN52_9FIRM Length = 282 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 107/286 (37%), Positives = 150/286 (52%), Gaps = 13/286 (4%) Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YPP L + P LF G L +A+VG+R S YG ++ LA Sbjct: 2 FTDHEYPPLLREIFNPPYVLFYRGRLPRPKELLIAIVGARRASSYGRNVAQMLGAGLAAA 61 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 G+ + SG ARGID AHK ALQ G + AVLG G++ +P +A++ A + E GG ++SE Sbjct: 62 GIGVVSGAARGIDTAAHKGALQ-KGQTYAVLGCGVDVCYPPENAKILAEIAETGG-IISE 119 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 + PP A +FP RNRII+G+ +GV+VVEA RSG+L+TA ALE+GR+VFA+PG I + Sbjct: 120 YAPGTPPHAGHFPARNRIINGMCRGVVVVEAGERSGALITADYALEEGRDVFAVPGSIFS 179 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN 316 GS+G H L+KQGA LVTE ++ILE ++ + + Sbjct: 180 EGSKGVHRLLKQGAKLVTEVQDILEEYDV----------RPVSHYAAPELLPDEAAVYGS 229 Query: 317 VGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + E VD + + +V LL+LEL G I Sbjct: 230 LDYEHPLSVDEIVIKTNLSASKVTYALLQLELRGLIGEDGAKRYIR 275 >UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=Q47S58_THEFY Length = 394 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 20/376 (5%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAV-----VLQQTGLTL-----RQAQRFLSFPRK- 58 +++ + + + L G + R+ +R+ + R Sbjct: 22 WSAVAEPGDPVLDALLRTY-SAAQAWEAVCAGTPLPLPGTAVSTTAYRRWERWQACARDT 80 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELHALHSFQLAVVGS 115 ++ L + L+ +P QL P AL+V G +L +++VGS Sbjct: 81 DVDGMLTRAGELGIRLVVPGDPEWPSQLDLLAERRPYALWVRGTHDLRNACLRSVSIVGS 140 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 RA S YG TLA G + SG A GIDG AH+ AL + ++AVL G++ + Sbjct: 141 RAASAYGLHVAVEMAATLAHHGWCVVSGGAYGIDGAAHRGALSGDAATVAVLACGVDLAY 200 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ H +L A ++ G +VSE+P P + F RNR+I+ L+ G +VVEA RSG++ Sbjct: 201 PKGHEQLFAEVV-NHGVVVSEYPPGTAPTRHAFLVRNRLIAALTPGTVVVEAGQRSGAMN 259 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 TA A E GR + A+PGP+ + S G H L++ A+ VT +++E L D+ Sbjct: 260 TAAHAQELGRTLMAVPGPVTSALSAGCHRLLRDYQAVCVTGARDVMEQLSPLGAAEGDSS 319 Query: 295 ENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 S D D +L + + V +A +G + QL L AG + Sbjct: 320 GGVQVSADLLDDTA--QRVLGALPERGSAGVARIAAASGLGPDAALRQLGLLAAAGHVER 377 Query: 354 VPGGYVRLRRACHVRR 369 P G+ R R Sbjct: 378 TPTGWRRRIPGARRPR 393 >UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL25_DESVM Length = 553 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 109/314 (34%), Positives = 145/314 (46%), Gaps = 8/314 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV------VLQQTGLTLRQAQRFLS- 54 + L L + + R+ + G+ A Sbjct: 20 TELWAALALRHSPGIGPRTVCRLLAGLGSALAAVQAADRGGHDWALAGVRPHMAAPVARG 79 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R + + ++ YP +L +D P L+ G+ L + +AVVG Sbjct: 80 VWRDTARQEWDAVRACRCSILLWTDPRYPARLREVSDAPAVLYCRGDASLLANHAVAVVG 139 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G +L+ GVT+ SGLARGID AH AAL+ G +I VLG G++ + Sbjct: 140 SRLSSRAGRGVAADIAYSLSAAGVTVVSGLARGIDREAHVAALEEVGSTIGVLGTGIDVV 199 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P HA L + E G LVSE+ PL +FP RNRIISG S GVLVVEAA RSGSL Sbjct: 200 YPPEHAELFERM-EATGLLVSEYAPGTLPLPAHFPVRNRIISGFSVGVLVVEAAARSGSL 258 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR ALEQGREV+A+PGP + G LI+QGA VT E++L +L L A Sbjct: 259 ITARLALEQGREVYAVPGPATAQYTCGCRGLIEQGARPVTTAEDMLADLAPVLGMELAAL 318 Query: 295 ENSFYSPDQQDVAL 308 P Sbjct: 319 AAPCPPPGWDGWDD 332 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Query: 311 PELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + VD + +V +L+ LE+ G + +PG Sbjct: 501 DAILTFLHGRPGAHVDDICRALSMGAADVSCRLVLLEVKGGVRRLPGMRYER 552 >UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella RepID=D1W888_9BACT Length = 379 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 100/365 (27%), Positives = 179/365 (49%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR------KSIE 61 + L I+ + MV++ + + + + + + +S + + + Sbjct: 13 IALTRINHFHLTGMVQLYRRLGSATAVIEHRHDIREVLPDASPKLVSSLQNVDQYLRRAD 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + E YP +L D P LF +G ++ ++VVG+R ++ Y Sbjct: 73 EELEWDVSNGVMPLCMNDENYPQRLRECDDAPLMLFYKGSVNLNQRRVISVVGTRRNTVY 132 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L V + SGLA G+D +AH+ ALQ ++ VL +GL+ ++P RH Sbjct: 133 GEDLIRRFMAELRQLCPQVLVVSGLAYGVDILAHRHALQNGYPTVGVLAHGLDYLYPPRH 192 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 193 RQTADEMVQKGGLL-TEFLTQTNADKVNFVRRNRIVAGVSDACIVVESAAHGGGLITASL 251 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW-LPDAPENS 297 + REVFA PG +G+P SEG + LI+ A L+ + ++++ + L A Sbjct: 252 SRTYNREVFAFPGNVGSPYSEGCNNLIRDNVAGLINHAYDFVKSMGWEDDARLSRAHHEG 311 Query: 298 FYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ +++ +G + +++++ +AG P+ ++ L LE+ G + A+PG Sbjct: 312 IERQLFPDLSAEELQVVGVLGKNNDLQINMLSVQAGIPIAKLSAILFTLEMKGVLKALPG 371 Query: 357 GYVRL 361 G L Sbjct: 372 GIYHL 376 >UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVV2_9FIRM Length = 360 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 188/369 (50%), Gaps = 19/369 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---------GLTLRQAQRF 52 +D + L SI L ++++I + +++ L +T + ++F Sbjct: 1 MDRNAIIFLSSI-GLSSSNIIKILDFSIEKNLALNEFLNLEENQYKPLLKKVTFDKIKKF 59 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + +E++L ++ + E YP L D P L++ G+ +A+ Sbjct: 60 YCKYEEILENTLNKSQKLQVKISTILDENYPSSLRRIEDPPAILYIRGK-DIKLENNIAI 118 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R H+ YG F + L++ TI SG+A GID ++HK AL+ N +IAVLGNG++ Sbjct: 119 VGARKHTSYGIYAVNKFVDELSSYNFTIVSGMAYGIDALSHKRALEKNMKAIAVLGNGID 178 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P+ + L +LL++ +VSE+P + + FP+RNRIISGLS+GV+VVEA +SG Sbjct: 179 IIYPKANTNLYMNLLDKA-TIVSEYPFGMKATKFTFPQRNRIISGLSEGVIVVEAKEKSG 237 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+TAR A EQG+EVFA+PG I + S+G + LI+ GA + + E+IL + + Sbjct: 238 SLITARLAAEQGKEVFAIPGNINSIYSKGTNLLIRDGATPLLQIEDILPFYPSIIKKEEE 297 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 S D +L + D ++ + ++ V + + L +LEL I Sbjct: 298 KHIIENLSED-------ENLILNLMEDGNITIEEICNKSNFDVIYINSLLTKLELKSVIE 350 Query: 353 AVPGGYVRL 361 + R+ Sbjct: 351 KISLTEYRI 359 >UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJS1_GLOVI Length = 360 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 151/347 (43%), Gaps = 15/347 (4%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M + W+ + + R+ + + R R+ Sbjct: 1 MTSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRY 60 Query: 60 IES-----SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 E L LE YPP L D P LF G L L +AVVG Sbjct: 61 RERTDPGLLLEALEDRWPSFWTPADGDYPPLLREIPDPPPLLFYRGPLRQLS-PAVAVVG 119 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG RW ETLA G + SGLA GIDG+AH+AAL V G + AVL L + Sbjct: 120 TRHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAALGV-GKTAAVLATSLTRV 178 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P HA +AA + G L+SE+ + L +NFPRRNRI+ G+S +V+EA RSG+L Sbjct: 179 YPPEHAGMAAEI-AHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGAL 237 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 ++A A + RE+FALPG I P ++G LI QGA ++ E +L +L L Sbjct: 238 ISAYLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQL------V 291 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + S + + + + D +A G + + Sbjct: 292 RATVPSALPPVLDGDEKRIWDQIQGDGCSFDELALGTGLTTDRLASA 338 >UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKL7_9BACT Length = 358 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 167/366 (45%), Gaps = 14/366 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR--QAQRFLS-FP 56 M +E L L + G + + + L + + +R + Sbjct: 1 MTRSERALLALNFSVNAPGQWARELDLLGETAESLVSNRKLALSLGFKEDRWERMAGLYG 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E + + + +P L + D P L+V+G +++VG+R Sbjct: 61 SDWPEEEMERASRFGAQVFFRGDPLFPDGLDHSDDPPVVLYVKGSWPIP-GPCVSIVGTR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R E LA GV + SG A GIDG AH AL+ G ++AVLG G++ ++P Sbjct: 120 RCSPYGSQVARALAERLALAGVLVVSGGAMGIDGSAHSGALEGQGATVAVLGTGVDVVYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +L +S+ E+ GAL+S FP+ + ++FP+RN II+ L+ ++VVE+ ++ GS++T Sbjct: 180 RGHEQLFSSISEKRGALMSRFPMGIRGNRWHFPKRNGIIAALADHLVVVESPIKGGSMIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A A E GR V+A+PGPI S+G + L+ GA + ++ E + F Sbjct: 240 AGLAGEMGRPVWAVPGPIVQKVSQGSNKLLFDGAQPLW---DLDEFVSFVAGRDSQLSLF 296 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV-P 355 P + L D +A++ G VPEV+ L +LE I P Sbjct: 297 PPGEPPKPSPLLEEIAT-----SGGITADGLADKLGISVPEVLATLADLEADEKIYRSGP 351 Query: 356 GGYVRL 361 G + L Sbjct: 352 GRWCAL 357 >UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia RepID=C6V4N9_NEORI Length = 375 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 165/370 (44%), Gaps = 18/370 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + WL+L + + + L Q ++ ++ F + Sbjct: 10 ELLFWLQLSRT--VGEVTFQSLISLYGTAENA----LGQLSTIQQRTKKTRPFSKTDALK 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L E+ + ++ A Y L D P + G + L++ +AVVGSR + Sbjct: 64 ELELTEKFDASILAACENKYSKNLRVIRDPPPVITARGNIELLNTPSIAVVGSRNATINS 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + LA G TI SGLA G+D A K +IAV+G G++ +P + +L Sbjct: 124 CNFAYSLARELAEEGYTIVSGLAIGVDTAALKIT-DSMLPTIAVIGTGIDQCYPTENQKL 182 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++E+GG +V+E P + +F RRNRIISGLS+ V+++EA+ SGSL+TA+ AL Sbjct: 183 QERIIERGGLVVTEVPFGKRGQSVHFARRNRIISGLSECVIIIEASENSGSLLTAQYALA 242 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW-----------LP 291 QG+ +FA PG + G + L+KQGAILV +++++L+ Sbjct: 243 QGKYLFASPGAPYDKRFSGSNRLLKQGAILVENALDVIQHLERKKRNDFGYKTLLDVEDK 302 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S + D + L ++L + P+ +A G ++ ++ELE+ G + Sbjct: 303 AFIPFSTLNCDTDKITLIKAQILKKIDSTSIPMSQLAHELGISEKTLLLAIVELEIEGKV 362 Query: 352 AAVPGGYVRL 361 V L Sbjct: 363 TRTIANEVSL 372 >UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=7 Tax=Betaproteobacteria RepID=C1D688_LARHH Length = 383 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 131/353 (37%), Positives = 179/353 (50%), Gaps = 11/353 (3%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-RKSIESSLCWLEQ 69 I L + R+ + + R A+ + R+ E+ WL + Sbjct: 36 IPGLGAVRLNRLLQAFGSAEAVLEAGTAGLTGIVPARLAEAIVQTDTRREQEAVAAWLAR 95 Query: 70 -PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 L+ YPP L TD P L++ G L LAVVGSR + G R Sbjct: 96 GEGRDLLTLADADYPPALAELTDPPPLLYLHGRRELLQQPMLAVVGSRQATPQGRRDATR 155 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 F LA G+T+ SGLA GID AH+ AL G ++ V+G G++ I+P + LA + Sbjct: 156 FARALAGSGLTVVSGLAAGIDAAAHEGALAAGGGTVGVIGTGIDRIYPAANRDLAYRMAA 215 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 + G LVSE PL PPLA +FPRRNR+I+GLS G LVVEA L SGSL+TAR ALE GREVF Sbjct: 216 E-GLLVSELPLGSPPLAAHFPRRNRVIAGLSLGCLVVEADLESGSLITARLALEAGREVF 274 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG I +P ++G H LI++GA L E+IL L L + + Sbjct: 275 AMPGSIHSPVAKGCHALIREGAKLTECLEDILSELPPVLSPPVEETRSQAVP------QA 328 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +LA +G E+ +D + ER G V ++ LL ELAG + +PGG + Sbjct: 329 IEDAVLAALGAEILTLDSLVERTGLTVDTLLGMLLAHELAGQVVGLPGGRYQR 381 >UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYH5_9BACT Length = 370 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 94/360 (26%), Positives = 152/360 (42%), Gaps = 9/360 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRKSIES 62 + L + V + + + + L A+ L E Sbjct: 8 IALTLTPGIGPKGAVHLLDVFGSAEAVFSASADELIEKARLRPELARAILQKKAFADAER 67 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + +I + YP L T DYP L+V G AL L +VG+R + YG Sbjct: 68 EVKHCRKHGIEIIASTDAQYPALLRETADYPHVLYVLGSPEALGKTTLTMVGTRRMTPYG 127 Query: 123 ERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 ++ LA R I SGLA GID H+AAL ++ ++ + L I P +H Sbjct: 128 QQMADRLIGELADRVADTVIVSGLAFGIDTACHRAALAFGMPTVGIIASALPGITPAQHT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +A ++E GGA+VSE + RNR+++G+S G +VVE+ + GS+ TAR A Sbjct: 188 AVARDMIEHGGAVVSELHSQTRQNGNFYHSRNRLLAGISGGTVVVESPVEGGSMDTARLA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 R + A+PG + S G + LI+ Q A +V E+I+ + + + D + Sbjct: 248 DGYNRTLMAVPGRATDFASAGANLLIRTQRAQMVCTGEDIVREMMWDQNRPGDLIDRPTA 307 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +P D+ + + E +G E+ LL LE+AG + +PG Sbjct: 308 APAALTRDEEGLLGC-FRTDDPISAEELCELSGLGFGELSALLLGLEMAGAVRQLPGNRY 366 >UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacteraceae RepID=B5ZK58_GLUDA Length = 395 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 123/383 (32%), Positives = 174/383 (45%), Gaps = 25/383 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 LRL + ++ A + + R + P + I + Sbjct: 7 LAARLRLARTEGVGPVGYRKLLLDYGDAERALAALPARARAAGRARALRI-PPAEDIAAE 65 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + +I YPP L D P AL V G+ L +A+VG+R S G Sbjct: 66 IDGTMALGGRIIMLGDPDYPPLLAGIHDAPPALSVLGDAALLAGCGIAIVGARNASSNGA 125 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R TLA++G+TI SGLARGID AH+ A++ GV+IA + GL+ +P HA L Sbjct: 126 RMAESLAATLASQGLTIISGLARGIDAAAHRGAMRA-GVTIAAVAGGLDRPYPPDHAELQ 184 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + Q G +V+E PL P + +FPRRNR+I+GL+ G +VVEAALRSGSL+TA A Sbjct: 185 GRI-AQHGVVVTETPLGTAPQSRHFPRRNRLIAGLALGCVVVEAALRSGSLITADLAAGY 243 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ------------------- 284 GR +FA+PG + S G + L+++GAIL +++L L Sbjct: 244 GRVLFAVPGSPLDARSRGSNALLRRGAILTESEQDVLAELPAGWQGRRQPESRQPENGVA 303 Query: 285 ---FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 P P + S A +L + TPVD + R ++T Sbjct: 304 QTQAAWPEPPAFPAPTPLSEGPGGQAEIRDAILTLLSFTPTPVDDLVRRCQFSTSAILTV 363 Query: 342 LLELELAGWIAAVPGGYVRLRRA 364 L ELELAG I +PGG V L Sbjct: 364 LSELELAGNIETLPGGSVVLPSQ 386 >UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=Betaproteobacteria RepID=C5AF38_BURGB Length = 445 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 132/404 (32%), Positives = 181/404 (44%), Gaps = 45/404 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-LTLRQAQRFLSFPRKSI 60 WL L S S L + + L A R + PR + Sbjct: 9 EALAAWLHLASASGLPAPARETLLQAFDSIEALVDADHAALASLAGEAAARAVHAPRAAA 68 Query: 61 ES-----SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 WL P H L+ YPP+ D P L+V+G+ L +A+VGS Sbjct: 69 LDAEADAVRAWLAIPGHRLVTRHDADYPPRFAMLYDPPPLLYVKGDAARLKRRAVAIVGS 128 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + G F LA G+ + SGLARGID AH+ AL ++AV+G G++ ++ Sbjct: 129 RLATPQGRADAAWFARALAAAGLVVVSGLARGIDAAAHRGALDSAAGTVAVVGTGVDRVY 188 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H LA ++ Q GA++SE+PL P A NFP+RNR+I+ L GVLVVEAA RSGSL+ Sbjct: 189 PAAHHLLAEAI-AQHGAVLSEWPLGTPARAANFPQRNRLIAALCDGVLVVEAAPRSGSLI 247 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GR+VFALPG I P + G H LI+ GA LV P +ILE + L Sbjct: 248 TARVANDIGRDVFALPGSIHAPLARGCHALIRDGAKLVETPSDILEEFGITVQELARPAA 307 Query: 296 NSFYSPDQ--------------------------------------QDVALPFPELLANV 317 + S + + + LL + Sbjct: 308 AAADSGTRFRAAGKRPRREKTGSNNNEAAQSPGRDGTGAAPDCAGVESLPPEALALLDAL 367 Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G P D++A RAG + LL LELAG +A++PG + Sbjct: 368 GHGPVPADLLASRAGLAADTLPHLLLRLELAGRVASLPGDRYQR 411 >UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 Length = 286 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 12/288 (4%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + + WL++ S S+ I V+ + + Q + F S ++ Sbjct: 1 MNFKERDTWLKIASCKSISAKKRAVIWQKVSTFGCFEMSIEQIVNIF------FSSDKKE 54 Query: 59 SIESSLCWLE---QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I L + + +I + YP L + P LF +G L +A+VG+ Sbjct: 55 QINMELEEADVYTTEDAEIICILDDNYPDLLKEIYEAPPLLFCKGNTALLKKQAMAMVGT 114 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + + LA +TI SGLA GID AHKA+L+ G +IAVLG+G++ I+ Sbjct: 115 RRMSEYGRKACAMIAGELAELKLTIVSGLALGIDAEAHKASLRKRGDTIAVLGSGVSNIY 174 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + LA ++E G L+SE+ + ++FP RNRIISGL+ G +++EAA RSGSL+ Sbjct: 175 PRSNEFLANEIIEH-GLLISEYLPNQEARRWHFPERNRIISGLALGTVIIEAAERSGSLI 233 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 TA ALEQ R+VFA+PG I S G + LI++GA LVT I+E Sbjct: 234 TADYALEQNRQVFAVPGNIFTDTSRGTNHLIQEGAKLVTNANNIIEEF 281 >UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxydans RepID=Q5FRH1_GLUOX Length = 394 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 111/381 (29%), Positives = 167/381 (43%), Gaps = 24/381 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D LRL + + + R+ A + + R+ + + Sbjct: 14 TDRIDILRLARTTGVGPINFARLMTQYGSAGAALAALPGRMRRAGRREDPVI-PTVSRMS 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L LE+ ++ YP L D P LF G++ L + +VG+R S Sbjct: 73 DELERLEKLGGKMLVRGDADYPLLLSCIPDAPPVLFTLGDVRKLSMRSVGIVGARNASAA 132 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R +A G+ + SGLARGID AH AAL G+++A + GL+ ++P +A Sbjct: 133 GIRIAESLSAEIAHSGLCVVSGLARGIDSAAHAAAL-YPGLTVAAIAGGLDHVYPPANAS 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + E+ G LV+E L P A +FPRRNR+I+G+S G L++EA + SG+L+TA A Sbjct: 192 LQQQIAER-GCLVTEALLGTAPQARHFPRRNRLIAGISLGCLIIEATVGSGTLITADLAQ 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYS 300 RE+ +PG +P S G + L+K G A L ++IL+ L L +AP + Sbjct: 251 SYNRELLVVPGSPLDPRSRGGNQLLKTGQATLTENIDDILQVLPSALPPREEAPWQRSSA 310 Query: 301 PDQQ--------------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 + L + + + VD V R V V+ Sbjct: 311 HSPPLTGFSEPSTPWGSPTSEDWVEPDLAQKTVCSLLSVTPVAVDDVVRRCQFSVSAVLA 370 Query: 341 QLLELELAGWIAAVPGGYVRL 361 L ELEL G + VPGG V L Sbjct: 371 TLAELELGGVVEFVPGGRVAL 391 >UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_FUSNN Length = 288 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 155/292 (53%), Gaps = 14/292 (4%) Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLF 129 N++ I + + YP L ++ P L+ +G L L ++VVG+R S YG+ Sbjct: 6 NYNFITINDDIYPECLKEISNPPLKLYYKGNLDLLKEERLISVVGTRNPSSYGKLCCEYM 65 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 + + +TI SG A+GID +AHK +L G +IAV+ +GL+ ++P + L + E+ Sbjct: 66 VKKMTGANITIVSGFAKGIDSIAHKTSLLTEGKTIAVIASGLDIVYPASNLSLYREI-EE 124 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G ++SE+ V P NFP+RNRII+GLSKG +VVE+ R GSL+TA ALE R+V+A Sbjct: 125 KGLILSEYEAGVKPFKSNFPQRNRIIAGLSKGTIVVESKDRGGSLITADLALEFNRDVYA 184 Query: 250 LPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 +PG + + S+G + LI+ A ++ E+L++ + + D Sbjct: 185 VPGDVFSEYSKGCNNLIRDSRAKSLSNINELLKDYSWEIEEKN----------DSNKYTK 234 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L ++ E +D + E++ +L+ LE+ G I ++ GG + Sbjct: 235 NQMLILNSLSSE-KNLDNILIETKIEQTEILAELMTLEIMGVIKSIAGGRYK 285 >UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus RepID=B2GC52_LACF3 Length = 291 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAH------WVAKQSHIDAVVLQQTGLTLRQAQRFLS 54 M E RL L VR+ + + +T R + L Sbjct: 1 MQPREFIFRLSLCPGLGPLSRVRLWRVAEQNYCFDNLELLTSQS----QITPRVKESLL- 55 Query: 55 FPRKSIESSLCWLEQPNHHL--IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + L L + N+ + I YP L P L+ +G LAV Sbjct: 56 --KNWASPYLDRLVEQNYRVPQITLLDPDYPAILREIYCPPLVLYYQGNRDLFKMPALAV 113 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR + YG ++ +TI SGLARGID +H+ AL G I V+G GL+ Sbjct: 114 VGSRQATSYGFTVLEKLIPSVVNHRITIVSGLARGIDSRSHEQALASGGAVIGVIGTGLD 173 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + L A + +Q G L++E+PL PPL +FP RNRII+GL + LVVEA +SG Sbjct: 174 QTYPRSNGALQAQVADQ-GLLLTEYPLQTPPLPSHFPARNRIIAGLCQTCLVVEAKQQSG 232 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 SL+TA AL++ R V A+PGPI +P S G + LI +GA + +++L Sbjct: 233 SLITANLALQENRNVCAVPGPITSPTSLGTNELISEGAQPILNSKDLLAEFDPWFEAEA 291 >UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFD3_KOSOT Length = 343 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 177/362 (48%), Gaps = 24/362 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E + L L DD+ + + ++ L R+ ++ +S R + Sbjct: 1 MNRLEYAI-LALAGDLTVDDLSILQSHNIGLKELTTSRIEL--LNERKQKQIISKCRS-V 56 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHS 119 E L + I + YP +L A+ P LF EG L+ LA+VGSR + Sbjct: 57 EKKLKEFR----NFITFQDQQYPEKLKASLFPPPVLFYEGNPDILNEENSLAIVGSRKAT 112 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + F L G+ I SGLA GIDG AH+ +LQ G ++AVLG+G++ ++P+ + Sbjct: 113 QYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVLGSGIDIVYPKSN 172 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +L + + E G +VSEF PP+ YNFPRRNRII GLSK VLVVEA RSGSL+TAR Sbjct: 173 RKLFSFITEH-GCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARL 231 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 AL+ GR+VFA+PG I SEG +WLI+ GA L+ E+ILE Sbjct: 232 ALDNGRDVFAIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFP-------------TV 278 Query: 300 SPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 S +L + + + E E++ +L L+L G + G + Sbjct: 279 SRSSSKDIQIKSSVLKVLSEFGELEFSELLEHTKLEHTELLLELTRLQLEGLVTESTGKW 338 Query: 359 VR 360 Sbjct: 339 RA 340 >UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevotella RepID=C9PX54_9BACT Length = 375 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 164/374 (43%), Gaps = 14/374 (3%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + E + L ++ + ++ + + + + + R R Sbjct: 1 MNNNETRNAIALTRVNYFNLAGLAQLYRQLGSATAVIEHRNDLREVLPDASPRLQEAMRN 60 Query: 59 ------SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 ++ + + + + + YP +L D P LF +G + + + + Sbjct: 61 IETHLKVADAEMEYNLRNGIRALSLADDDYPQRLKNCDDAPLVLFYKGTANLNRARVINI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R + YG+ R F L + V I SGLA G+D AH+ AL ++ VL +G Sbjct: 121 VGTRHCTAYGQDLIRRFVSELKSLCPEVLIVSGLAYGVDINAHRQALANRLDTVGVLAHG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ ++P RH + A +L QGG L +EF + NF RRNRI++G+S ++VE+A Sbjct: 181 LDYLYPTRHKQTADEMLTQGGLL-TEFLTNTNADKLNFVRRNRIVAGISDACVLVESAAH 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 G L+T A + R+VFA PGP+G P SEG + LI+ A LV+ + + L + Sbjct: 240 GGGLITTSIARDYNRDVFAFPGPVGAPYSEGCNNLIRDHKAQLVSSAADFVHALGWETDL 299 Query: 290 LPDAPENSFYSPDQ-QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELEL 347 ++ ++ + + ++ ++ A P+ + L +LE+ Sbjct: 300 KRMQATRQGIERQLFPQLSNEEQAVVQALEKQNDQAINQLSLTANIPISRLTVLLFQLEM 359 Query: 348 AGWIAAVPGGYVRL 361 G + + GG L Sbjct: 360 KGILKLLAGGCYHL 373 >UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42420 Length = 290 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 144/288 (50%), Gaps = 13/288 (4%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHW-------VAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 E + L S L + + + S ++ L +A + +++ Sbjct: 5 RERLIVLHSSMFLSWKQIAALINHDPELLTPFTSSSAFF---IKHLHLKRDKAVKLVTYL 61 Query: 57 RKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 ++ L + YP QL D P L+ +G++ L +LAVVG Sbjct: 62 KEVNSREYVSKLATSQITTLTRFDADYPEQLKELYDPPWVLYCKGDIDLLLIKIKLAVVG 121 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G + L V I SGLA GID AH+ + NG +IAVLG+G + Sbjct: 122 SRTPTNRGLGAVANLVKPLVKENVCIVSGLALGIDTAAHQQTISQNGHTIAVLGSGFHHF 181 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + L + ++SE+P PP + FP RNRIISGLSKGVLV+EA RSGSL Sbjct: 182 YPKENKNLFTYMAAHQ-LVISEYPPHQPPAKWTFPARNRIISGLSKGVLVIEAKERSGSL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 +TA AL+Q R+VFA+PGPI + S+G + LIK+GA LV E +IL Sbjct: 241 ITADQALDQNRDVFAVPGPIDSELSKGTNQLIKEGAKLVVEMSDILNE 288 >UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus RepID=C9S072_GEOSY Length = 293 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 141/294 (47%), Gaps = 9/294 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS 54 M D + + L + + + ++ L+ Q F Sbjct: 1 MYDTVRDRLIHLHHCRGAGWKTIHSLLKVDPTLTAPFSLPPNDLRPLVPLSDAQWTAFFH 60 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 ++ + + +I YPP L P L+ +G+ L +++ Sbjct: 61 DLHSIDVQRVIKTYKGRCIRVITVFDSDYPPLLKYIYAPPWVLYAKGDSALLQEWKLISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G L G TI SGLA GID AH+ A+Q G +IAV+ GL+ Sbjct: 121 VGTRRPTKEGIEALNKLVPPLVAAGFTIVSGLAFGIDVCAHQLAVQYGGSTIAVIAGGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P+ H A+LL +++E P P A+ FP RNRIISGLS G LVV+A +SG Sbjct: 181 HIYPKEHRP-FATLLMNEQLVIAEHPPATRPQAWQFPARNRIISGLSLGTLVVQAKRKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 SL+TA ALEQGREVFA+PGPIG S GP+ LI+ GA LV E +IL+ + Sbjct: 240 SLITAAYALEQGREVFAVPGPIGLAESAGPNTLIQHGAKLVQEAADILDEFPYV 293 >UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP6_BACSK Length = 303 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 6/276 (2%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQR-FLSFPRKSIESSLCWLEQPNHH 73 ++ W + G+ + A + + + E+ L + Sbjct: 22 RAFSKLLCWDPSLQAPYHASPLEIAAKLGINEKSATAFWRHLHKTTPENMYANLVETGIQ 81 Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 ++P YPP L D P L+ +G + L + ++A+ G+R + YG + + Sbjct: 82 VLPLFHPLYPPLLKTIYDPPYLLYAKGNIKRLQTKKIAICGTRTPTAYGRAALATIAKPI 141 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 + +TI SG+ARGIDG+AH+ A++ G +IAVLG+G + I+P H+ L +L E L Sbjct: 142 SEHSLTIVSGMARGIDGLAHEQAIRTGGATIAVLGSGFDNIYPPEHSTLFHALAEHQ-LL 200 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V P ++FP RNRIISGLS+ V+++EA +SGSL+TA ALEQGR+VFA+PGP Sbjct: 201 LSEYPPFVKPQRWHFPVRNRIISGLSQAVIIIEAKRKSGSLITADLALEQGRDVFAVPGP 260 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 + + SEG +WLI QGA + E + E + L Sbjct: 261 VTSAQSEGTNWLISQGAGCLYTSEALFEAMPQLLSK 296 >UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBT0_9LACT Length = 289 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 99/279 (35%), Positives = 147/279 (52%), Gaps = 3/279 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS--L 64 L + +R+ + H+ A L R +++ + L Sbjct: 10 LFHLTLCKGIGATSRIRMLSSLMDSPHLSAYELAFCAQLNAANTRLFMDSYAAVDRAVAL 69 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 ++ + + + YP L + P LF +G+L L+ LA+VGSR S YGE+ Sbjct: 70 NEYKKRHIKWVSILDQSYPEYLKHIYNPPALLFYQGDLTLLNQKLLAIVGSRLTSSYGEK 129 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L T G+T SGLA+GID + H+ +++ G +IA++G GL+ +P + +L Sbjct: 130 ALTILLPELITNGITTVSGLAKGIDRLVHEKTIELGGRTIAIIGTGLDQFYPFENEKLQK 189 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + L+SE+PL PL +FP RNRII+GLS G LV+EA RSGSL+TA AL++G Sbjct: 190 EI-AKNHLLISEYPLGTKPLKQHFPMRNRIIAGLSLGTLVIEAKYRSGSLITANIALQEG 248 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 REVFA+PG I NP SEG + LI GA V + ILE Sbjct: 249 REVFAVPGNITNPYSEGTNDLILHGAKCVLTADHILEEF 287 >UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VGE8_9BACT Length = 353 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 12/352 (3%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLR----QAQRFLSFP--RKSIESSLCWLEQPNHHL 74 M + + + + Q R+ E L + N Sbjct: 1 MAELYKRAGSATAVIEHKRDIREILPEASTHLIQALKDIDSLREWAEQELEYDRLHNIEP 60 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I + E YP +L D P L+ G + + ++G+R + YG+ R F L Sbjct: 61 ICMNDERYPQRLKECPDAPILLYYLGNADLNNRHVINIIGTRHCTTYGQDIIRSFVRELK 120 Query: 135 TR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 V I SGLA G+D AH+AAL+ ++ VL +GL+ I+PR H A +++QGG Sbjct: 121 VLCPDVLILSGLAYGVDIHAHRAALENGFETVGVLAHGLDDIYPRGHRDTALKMIKQGGL 180 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 L SE+ P+A NF +RNRI++G + ++VE+A + G L+T A GREVFA PG Sbjct: 181 L-SEYTTHTQPVARNFVQRNRIVAGCADATILVESAAKGGGLITCSIARSYGREVFAFPG 239 Query: 253 PIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLH-WLPDAPENSFYSPDQQDVALPF 310 + + SEG + LI+ GA L+T + ++ + + L A + D++ Sbjct: 240 AVHSDYSEGCNNLIRDNGAALITSATDFVKAMGWDDAIKLGQAQQRGIERTLFPDLSSEE 299 Query: 311 PELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + + +++++ +A P+ + L LE+ G I A+ GG L Sbjct: 300 EAIVRVLAKNNDLQINLLSIQANIPISRLTGILFTLEMKGVIRAMAGGCYHL 351 >UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia RepID=C7NA26_LEPBD Length = 363 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 30/372 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL + + ++ + + + + + + L Sbjct: 3 WLRLKE-YGMKNAHIKKLMLIFQDFEELFYEENFKL-FNDELKSQLEEAMKIDMTARLEL 60 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE--------------LHALHSFQLAV 112 E+ +I A+ + YP +L D+P L+++G+ + + + + Sbjct: 61 YERNRVRIISANDKEYPKKLKEIKDFPVFLYLKGKKLKDYDKIKIDKGKISVDNKRNIGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + +G+ L VT+ SGLA GID +A K AL ++V+G GL+ Sbjct: 121 VGTRRATKFGKTACEKIVNELVNYEVTVISGLADGIDTIALKTALDKEIEVVSVVGTGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L + E G L+SE+PL P + FPRRNRII+G+S GVLV E+ + G Sbjct: 181 IVYPYENRDLWERIGE-VGTLISEYPLGTQPTRWTFPRRNRIIAGISDGVLVAESFKKGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA A REVFA+PG I P EG + LIK A LVT +I E + + Sbjct: 240 ALITAELAFSMNREVFAVPGFINYPSFEGCNDLIKNNKAKLVTCGNDIAEEFLWDIKKEK 299 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVP--EVVTQLLELELAG 349 + + + + + + + ++ + ++ L++ G Sbjct: 300 SKLQKLTSEEQIVFETIMEE----------VSFEQILQNVKEKIEKNKLFSIIMSLKIRG 349 Query: 350 WIAAVPGGYVRL 361 I G Sbjct: 350 LITETNGAKYIR 361 >UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7E1_9BACI Length = 281 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 12/272 (4%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-------SIESSLCWL---EQPNHHL 74 H + S I + + + + F RK S+E ++ + E+ H Sbjct: 11 LHHKSSWSSIYHFLKKDPHMKTSLSAAFSEPDRKLFFPTNSSLEKTIEKIRQYEKYGIHC 70 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCETL 133 I YPP L P L+ +G++ LH +LAVVGSR + YG + L Sbjct: 71 ITIFEPEYPPLLKEIYQPPWVLYAKGDISFLHLDPKLAVVGSRQITGYGRSAIKKVFPGL 130 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 +GVTI SGLA G+D AH+ A+ + G +I V+ GLN I+P+ + RLA ++E + Sbjct: 131 VGKGVTIVSGLAAGVDAEAHETAISLGGRTIGVIAGGLNHIYPKSNERLARRMMEDH-LV 189 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P D P + FP RNRIISGLS+G ++EA +SGSL+TA A+ +GR+VFALPG Sbjct: 190 ISEYPPDARPDRWQFPMRNRIISGLSQGTFIIEAKSKSGSLITANYAVNEGRDVFALPGS 249 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 I +P S G + I+QGA L+ + EILE L F Sbjct: 250 IFSPASAGTNEWIQQGAKLIADASEILEELNF 281 >UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alphaproteobacteria RepID=Q28MI7_JANSC Length = 402 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 167/349 (47%), Gaps = 9/349 (2%) Query: 16 LYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLI 75 + +R+ + + + Q P + + L + +I Sbjct: 57 VGPATYLRLLAEHGTAAAALDALPEVAAAAGVQKYEVC--PEPVVLAELRAAARVGARMI 114 Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L TD P L+ G + +A+VG+R S G R R TL Sbjct: 115 CLGDADYPETLAQITDAPPVLWAIGRTSLMARPCVALVGTRNASSLGARMTRKLAATLGE 174 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G T+ SGLARGID +AHK++L+ +IAV+ G++ ++P +A LAA + E G +S Sbjct: 175 AGFTVVSGLARGIDAIAHKSSLETG--TIAVVAGGVDVVYPTENAELAAQISET-GLCLS 231 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E PL + P A +FPRRNRI+SGL++GV+VVEAA RSGSL+TARCA +QGREV A+PG Sbjct: 232 EQPLGLQPQARHFPRRNRIVSGLAQGVIVVEAAARSGSLITARCAADQGREVMAVPGHPL 291 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQFGLH----WLPDAPENSFYSPDQQDVALPFP 311 + + G + L++ GA LV ++++E L E +P Sbjct: 292 DSRASGANILLRDGATLVRGVDDVIEALGRPAQSGDAPSAVVHELQRPTPAAAKDGGLEG 351 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LA++G D + E+ L LE++G + GG V Sbjct: 352 RILAHLGPTPVAEDQMIRDLNATPREMAQALAVLEMSGRVTRSAGGMVS 400 >UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYG5_9FIRM Length = 286 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 155/292 (53%), Gaps = 10/292 (3%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 N ++ Y L P L+ G+ +S +AVVG+R + YG+ Sbjct: 2 MANIKIVKNTDSEYSKLLEKIKRPPELLYCLGDTALFNSPCIAVVGTRKPTEYGKWCTYN 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 ++L RG TI SG+A GID +AH+ AL++ G +IAV+G G++ +P R+ L + E Sbjct: 62 IVKSLVMRGHTIVSGMASGIDEMAHRTALELGGKTIAVMGTGIDGCYPARNKALKRRI-E 120 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 Q G ++SE V P Y+FP RNRII+GLS+ +VV+A + SGSL+TA+ A+E+GR+V+ Sbjct: 121 QDGLVISEDGEKVKPRRYSFPIRNRIIAGLSEATVVVQAGVYSGSLITAQLAMEEGRQVY 180 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG I S G + LI GAI++T P+++ +L ++ D + ++ Sbjct: 181 AVPGDIDKVMSIGCNKLIADGAIIITVPDDV--------AFLEKTNGDNEVVIDLESLSE 232 Query: 309 PFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++ V + + +A V +V++ + E+E+ G I G Sbjct: 233 VERKIYELVKREGEMSFEKIARLTKTGVSKVMSVITEMEIKGLITTSLGRVF 284 >UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis RepID=C7CSL8_ENTFA Length = 293 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 92/284 (32%), Positives = 141/284 (49%), Gaps = 4/284 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL---SFPRKS 59 ++ +L + ++++ Q +D + + + R L S+ + Sbjct: 11 QRQLLFKLAVCQGIGNLGILKVLQEAVAQKRVDFSSTEIIRIAEIKKYRELFEQSWLHHT 70 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 I S ++ Q H + YP L + P LF G L L ++ +VG+R + Sbjct: 71 IHSEALYIRQCQHQFMTILDAVYPKLLREIYNPPAILFYRGNLQLLSRRKIGIVGARYAT 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG R + G TI SGLA+GID +H+ A+Q G +I +LG GL+ +P Sbjct: 131 SYGLRVTEALVPKIVKEGFTIVSGLAKGIDSRSHEMAIQNGGQTIGILGTGLDVYYPYEK 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L ++Q +++E+ P Y+FP RNRII+GLS GV V+EA SGSL+TA+ Sbjct: 191 KEL-QQTMKQNQLVLTEYVNGSGPKKYHFPARNRIIAGLSLGVCVMEARKNSGSLITAQA 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A++ GREVFA+PG I S G H LI+ GA V ++I E L Sbjct: 250 AMDYGREVFAVPGSIFQSFSTGCHELIQDGAKCVQTIDDICEEL 293 >UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QA47_CATAD Length = 600 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 107/383 (27%), Positives = 157/383 (40%), Gaps = 25/383 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQS---------HIDAVVLQQTGLTLRQAQRFL 53 D L L S + R+ + D + +A Sbjct: 216 DRRARLVLHHASEPGDALLCRLVARFGAPTVATALLSGSAADLLSAHDEESAADRAALIS 275 Query: 54 SFP-------RKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELH 103 R ++ L E+ + + +P L P ++ G +L Sbjct: 276 RAHTLQTRCYRADPDADLAVSEKTGARYVIPADDAWPTALDDLGDAAPLGMWFLGTADLV 335 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 A +++VG+R + YG LA RG I SG ARGIDG AH+ AL GV+ Sbjct: 336 AASRRGVSIVGARIATGYGMHVAGELAAGLAERGWAIISGAARGIDGAAHRGALAARGVT 395 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A L G++ ++P H L ++ + G ++SE P + F RNR+I+ L G + Sbjct: 396 VAALACGIDLVYPAGHEALIGAIASE-GLVLSELPPGTAVSRFRFLDRNRVIAALGLGTV 454 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEAA RSGSLVTAR A GR V A+PGP+ + SEG H LI+ GA+LVT E++E+L Sbjct: 455 VVEAAARSGSLVTARLADSLGRPVLAVPGPVTSEASEGTHQLIRDGALLVTRAAEVVEHL 514 Query: 284 QFGLHWL--PDAPENSFYSPDQQDVALPFPELLANV---GDEVTPVDVVAERAGQPVPEV 338 L P + + + +L + G A AG V Sbjct: 515 GDLGADLAEPTTTARTSSRRPRDSLDPIAARVLDALPIAGRGTLDTVEAALAAGLEPRAV 574 Query: 339 VTQLLELELAGWIAAVPGGYVRL 361 L L AGW+ G+ Sbjct: 575 HAALGRLTTAGWVDRDERGWCAR 597 >UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M986_9BACT Length = 366 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 26/366 (7%) Query: 2 VDTEIWL---RLMS--ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 +T +WL L + + D + + W++ + + T +QA R Sbjct: 12 KETLVWLGSGTLSARALEGCPDVDGLELLDWLSARRAV----------TPQQASRLRDLW 61 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R+ L + ++ YP +L + P L+ G + +AVVG+ Sbjct: 62 RQGWPARQLEDCTESGVTVVTCRDSQYPERLWDCAEPPMVLYCRG---PVVQSGVAVVGT 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + L+ GVT+ SG A G+DG +H AL + AVLG G++ + Sbjct: 119 RRCSAYGAHVAQWVGRGLSEAGVTVVSGGAAGVDGASHSGALDGGTPTAAVLGTGVDVVW 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L + ++ GG+L+SE+PL ++FPRRNRI++ L+ V+VVE+ +R G+++ Sbjct: 179 PRGHEELFSRIIGSGGSLISEYPLGAAGKPWHFPRRNRIVAALATSVVVVESPIRGGAMI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+E GR+++A+PG I G + L+ GA + + + L+++ Sbjct: 239 TARLAMEMGRDLWAVPGRIDEDTCAGSNRLLYDGATPLVDRQSFLQSVTGLGQL------ 292 Query: 296 NSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 N F + + ++ +L V D ++ +G P +V L L++ G I Sbjct: 293 NLFDADGESGLSDVQRSVLEAVRSSGDKSADQISIDSGVPPYQVPGVLSALQVKGLIYPS 352 Query: 355 PGGYVR 360 G R Sbjct: 353 GVGRWR 358 >UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY0_9BACT Length = 379 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 10/358 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFL--SFPRKSIES 62 L+L + + M +I + + L+ G+ ++ + + ++ +S Sbjct: 10 LKLRCVRGVEETVMEKIYAGAGTLTGALKLDMGALRTYGIKKEISENIVTSNIDKQLFKS 69 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L LE+ ++ D E YP L T P LF G+ + +AVVGSR S Sbjct: 70 ELKALEECRADILCIDDEDYPEMLRQTVGAPCLLFARGDTASFKRPAIAVVGSRNASRAA 129 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R L G I SG A+GID AH A++ GV+ AV+G G+N P+ + + Sbjct: 130 CDFSRRLACDLGEAGFNIVSGFAKGIDIHAHLGAVER-GVTTAVMGCGVNHFFPQDNLKH 188 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 +L + G +V+EF + P NFPRRNRIISGLS GV+VVEA+ RSGSL+TAR A E Sbjct: 189 LNKVLAK-GCVVTEFLSNCHPAQRNFPRRNRIISGLSFGVIVVEASDRSGSLITARLAGE 247 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QGR+VFA+P N + + L+K GAIL +++E L++ + L + + + Sbjct: 248 QGRDVFAVPAFPDNRNTA-TNALLKAGAILTESYFDVIEELKYQIGNLKEVDKQE--TSV 304 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +L + D ++ +G + VV L ++EL G++ G R Sbjct: 305 LEFGSPEQAKLFDLLMRGTLNPDELSAMSGFDIESVVINLAQMELEGYVFREIDGKYR 362 >UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobacillus RepID=A8YV46_LACH4 Length = 282 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 3/276 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRKS 59 M E LRL + ++ IA+ + I+ L++ L+ + L+F Sbjct: 1 MKKKEFLLRLKLQKGVGYVKLLTIANQMKPGLEIELDDLKEMDLSEKLVDACHLAFNDDK 60 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + + + +I E YP +L P LF +G L L + +VGSR + Sbjct: 61 LAKLTRQIRRQCI-VISFFDEEYPEKLRQIYRPPLILFAQGNLSLLKKDIVTIVGSRYPT 119 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 Y L + I SGLARG+D +AH+A L+ NG ++AV+GNGLN +P+ + Sbjct: 120 HYSRDVINRLVPNLLDQNKVIASGLARGVDALAHEATLKNNGRTVAVVGNGLNHSYPQEN 179 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + + G ++SE+ D PP Y FP+RNRI++GLS+ ++V EA +SGSL+TA Sbjct: 180 YSLQEQI-KNDGLIISEYLPDTPPRPYRFPKRNRILAGLSESIIVTEAKEKSGSLITASL 238 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 L++ R+++A+PGPI + S GP+ LI+ GA + + Sbjct: 239 GLQENRDIYAVPGPITSKLSAGPNQLIEAGATPIVD 274 >UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Streptosporangineae RepID=D2AUI4_STRRD Length = 396 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 120/396 (30%), Positives = 176/396 (44%), Gaps = 35/396 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI----------------------DAVV 38 M D + LM ++ M R+ Q+ + ++ Sbjct: 1 MSDRLARVTLMRVAEPGDAMMGRLVAAHGPQAAVARIREGRPEPELARWFADSPRRESAG 60 Query: 39 LQQTGLTLRQAQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYP 93 + LT R + F S+ + L E+ L+ +P QL P Sbjct: 61 SRDERLTARLGRMFASWAARLETADPVRDLDEGERRGARLVVPGDSEWPTQLDDLGESRP 120 Query: 94 GALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 AL++ G +L +AVVGSRA + YG F L RG + SG A GIDG Sbjct: 121 HALWLHGEADLRFSCLRSVAVVGSRAATPYGTHVAAEFGAGLGERGWVVISGGAYGIDGA 180 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 H+ AL ++AVL G + +P H L A++ Q G LVSE P+ P F R Sbjct: 181 VHRGALAGETPTVAVLACGADVAYPSAHHSLFAAVRSQ-GVLVSECPMGATPTRPRFLIR 239 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-A 270 NR+I+ LS+G +V+EAA+RSG+L TA A+ R + A+PGP+ + S G H LI+QG A Sbjct: 240 NRLIAALSRGTVVIEAAVRSGALNTAGHAVSLNRHLAAVPGPVTSETSAGCHRLIRQGRA 299 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAE 329 I VT PEE++E + L PE + ++ +L V T +A Sbjct: 300 ICVTTPEEMIELVGAMGGDLA--PEPRGPVLPRDRLSPEIRRVLEAVPARTGTGPATIAV 357 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 AG + V++ L L AG++ P G+ RLR Sbjct: 358 AAGVDLDTVLSCLGALAAAGYVERAPRGW-RLRPDG 392 >UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria RepID=A5VD04_SPHWW Length = 592 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 151/341 (44%), Gaps = 6/341 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + LRL+ + ++ A + P + E Sbjct: 234 NERLARLRLIRTPRIGPVAYSQLIRRFGSGVEALAALPALARRGGGALPAI--PPSAAAE 291 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + + YP L P L V G++ L +A+VG+R S Sbjct: 292 AEADRVARLGARHLFRGEAGYPALLDRIDTAPPVLIVRGDIALLDRRIVAIVGARNASGA 351 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R+ R L G + SGLARGID AH ++ + AV+ G++ ++P +A Sbjct: 352 AVRFARTLAHGLGEAGWLVVSGLARGIDTAAHAGSIATG--TAAVIAGGIDIVYPPENAA 409 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ E+ G L++E P V P A +FP RNRII+GL+ G +VVEAA +SGSL+TAR A Sbjct: 410 LQEAIAER-GLLIAEQPPGVEPRARHFPYRNRIIAGLAAGTVVVEAAPKSGSLITARLAA 468 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GREV A+PG +P ++G + LI++GA L+ +I E L +N +P Sbjct: 469 EFGREVMAVPGSPLDPRAQGCNLLIREGATLIQSAADIAEALSPIAGVAARPADNFASAP 528 Query: 302 DQQDVALPFPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + P L +G VD + ++G V Sbjct: 529 APAEADEPARAALTGLLGPVPLAVDELIRQSGVSAAMVQMV 569 >UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAQ9_9DELT Length = 439 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 124/424 (29%), Positives = 162/424 (38%), Gaps = 66/424 (15%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSF-PRKSIES 62 L L L + +A A+ + R E Sbjct: 9 ACLALRHTPRLGPKVWKPLLSHYGSAFEAVREAASWPADVAPRSMARACKAEVWRDKAEE 68 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + +I +P L D P L+ G+L L + +AVVG+R + G Sbjct: 69 EYRAAIRAGMTVITWFDVRFPDALREIEDPPCLLYASGDLTLLKNPGVAVVGARECTALG 128 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 L+ G+T+ SGLA GID AH L G SIAVLG GL+ +P + + Sbjct: 129 LDAAGRISSQLSRIGITVISGLAMGIDRQAHLGGLSGIGGSIAVLGCGLDVDYPHDNHDV 188 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + LE G +V+EF V P A NFP RNRIIS LS GVLV EAA SGSL+TAR A E Sbjct: 189 RRA-LETRGLVVTEFGPGVTPRAGNFPFRNRIISALSLGVLVAEAAHNSGSLITARLAGE 247 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE--------EILENLQFGLHWLPDAP 294 QGREVFALPGP+G P G H LIKQGA LV E + L P A Sbjct: 248 QGREVFALPGPLGQPTFTGCHRLIKQGAALVESAEDIVEILRYDFARELAHIPDPEPVAE 307 Query: 295 ENSFYSPDQQDV------------------------------------------------ 306 ++ + Sbjct: 308 ADNRVDAVEPGGKARASRAEKKRSKRPANKTPETTHESEATGGADAGESRTRKRPGAARR 367 Query: 307 -----ALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LLA + G + +D + G V LL LE+ G + +PG + Sbjct: 368 SEMTLNDEERQLLAVLDGTDRVHIDTLGRTLGWESSRVSRVLLMLEVGGAVHQLPGMWYM 427 Query: 361 LRRA 364 R A Sbjct: 428 AREA 431 >UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKZ0_9BURK Length = 362 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 162/320 (50%), Gaps = 19/320 (5%) Query: 66 WLEQPNHHL-IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 WL Q N + YP LLA D P LF EG L + +A+VGSR + G Sbjct: 50 WLLQSNKRFWVSILGPGYPQSLLALKDPPLILFGEGRQDLLKTRGIAIVGSRNATRTGLS 109 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + F + A + SGLA GIDG AH ALQ G +IAVLG G + I+P HA L A Sbjct: 110 NAQGFGKAFAQAQWVVVSGLAEGIDGAAHAGALQALGATIAVLGCGPDEIYPPHHAGLKA 169 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ QGG ++SE+P P A FPRRNRII+GL+ +LVVEAA+RSGSL+TAR A E G Sbjct: 170 QIVGQGGLVLSEYPPGTAPQAGFFPRRNRIIAGLADALLVVEAAMRSGSLITARVASELG 229 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP-----------DA 293 R V A+PG I + S+G H +IK+GA+LV +E++E + L Sbjct: 230 RPVGAIPGSIHSSQSKGCHDMIKKGALLVETAQELMEEAKASLPAYKLASVLQEDDSDCH 289 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E + + +L +G + D +A + G + + L ELEL G + + Sbjct: 290 TEMTCTIDTDAEPDEELGRVLQYLGHDPVHTDTLARQLGLGTEDTLAALTELELLGLVLS 349 Query: 354 VPGGYVRLRRACHVRRTNVF 373 G VR VF Sbjct: 350 ESGNRW-------VRSNGVF 362 >UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobacterales RepID=A1BA43_PARDP Length = 418 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 116/398 (29%), Positives = 171/398 (42%), Gaps = 45/398 (11%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 LRL+ + R+ A + + + PR + E+ + Sbjct: 24 LAILRLIRSRRVGPATFHRLLDEHGSAEAALAALPAIARAAG--VEDYAPCPRAAAEAEI 81 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + L+ YP L D P L++ G++ L +AV+G+R S G R Sbjct: 82 AAGHRAGARLLTWGDPDYPALLREVADAPAVLWLRGDISVLARMPVAVIGARNASSLGLR 141 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 R L+ G + +GLARGID +AH+AAL +IAV+ G++ I+P +A LA Sbjct: 142 MARGMASGLSQSGAAVVAGLARGIDTIAHEAALHGG--TIAVMAGGIDKIYPGENAALAE 199 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + E G LV+E P P+A +FP RNRIISGLS+ V+VVEAA RSGSL+TARC L+QG Sbjct: 200 EICET-GLLVTEQPPGTEPVARHFPARNRIISGLSRAVVVVEAAYRSGSLITARCGLDQG 258 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP------------- 291 REV A+PG + + G + LI+ GA LV ++L LQ Sbjct: 259 REVMAVPGHPMDARAGGCNALIRDGATLVRNSADVLAALQSNDPIAAKQAPAENPVEATP 318 Query: 292 ---------------------------DAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 D +LA +G T Sbjct: 319 AAVAAMPVQVRQPAAVARRLAELGHGIHHRPMMGRPRDAGGPVNLEGRILARLGPSPTEE 378 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +++ G P + +L LEL+G + + GG + L Sbjct: 379 NMLIRDLGVPAAVLAPAILALELSGRVQRIAGGKLALN 416 >UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW70_RUBXD Length = 368 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 181/368 (49%), Gaps = 15/368 (4%) Query: 2 VDTEIWLRLMSIS-SLYGDDMVRIAHWVAKQSHIDAVV-----LQQTGLTLRQAQRFLSF 55 +L L + + R+ + + ++ GL + A Sbjct: 6 EARAAYLLLSFLQARAGRSLVRRL---GGDPAGAWVSLPAGELEREYGLGAKDASELARL 62 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +E L L ++ YP L D P ALFV+G L +AVVG Sbjct: 63 RETLDVEGVLRELAGRGISVLTPADAAYPHALREIPDPPPALFVDGALPVGE--AVAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G R LA RGV + SGLA G+D AH+ AL G ++ VLG G++ + Sbjct: 121 SRKPSPGGLEVARRLGRALAGRGVCVISGLALGVDAAAHEGALLAGGPTVGVLGCGIDVV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR +ARL + GG +VSE+ L PPLA+ FP RNRII+GL++ V+VVEAA RSG+L Sbjct: 181 YPRVNARLFGEVRAAGG-IVSEYYLGEPPLAWRFPARNRIIAGLARVVVVVEAAERSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR ALE GR+V+A+PGP+G G G + L+ GA ++ + E +E + A Sbjct: 240 ITARHALESGRDVWAVPGPVGFAGCRGSNRLLADGAGVLWDIGEFVEAVAP--GREGAAE 297 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 E +P + +L +G E P D VA+R G + +V++ L LEL G++ Sbjct: 298 EAGGGAPPPPGLPAGEAAVLGALGFEPAPADEVAQRCGLAMGQVLSALSMLELKGYVVRD 357 Query: 355 PGGYVRLR 362 GG R Sbjct: 358 AGGGFVRR 365 >UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTV0_9PROT Length = 371 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 109/361 (30%), Positives = 164/361 (45%), Gaps = 6/361 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL L R+ + + +G R+ + + Sbjct: 8 DETLAALRLARTVGLGPLTFRRLIDRFGSAIAVIRGL--DSGEIPRKGRSLALPSAAAAR 65 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L+ YP L A D P L + G L +A+VG+R S Sbjct: 66 AEWADAHGYGATLLSLTDPSYPTALRAIEDPPPVLTLLGRGDLLTRPAVAIVGARNASSA 125 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGIDG AHK AL+ +IAV+ G+++I+P HA Sbjct: 126 GLRLAETLAADLGEAGCVVVSGLARGIDGAAHKGALKTG--TIAVIAGGIDSIYPPDHAD 183 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ +Q G +++E + +FPRRNRI++GLS+ ++VVEAA RSG+L+TAR Sbjct: 184 LYRAIGKQ-GLILAEDAIGRRAKGQDFPRRNRIVAGLSRVIVVVEAAERSGTLITARMGN 242 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGRE+ A+PG +P S G + L++ GA L+ E++LE L+ P + Sbjct: 243 EQGREIGAVPGSPLDPRSAGTNRLLRSGATLIRHAEDVLELLEQEHRAQPITLQELPSPY 302 Query: 302 DQQDVALP-FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + + T DV+ G + LL+L L G I V GG Sbjct: 303 EAPQITEDLKERVRNLLSVTPTSRDVLLRETGLAPGTLADCLLDLLLDGHIEEVGGGAYA 362 Query: 361 L 361 L Sbjct: 363 L 363 >UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQR1_9FIRM Length = 302 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 97/285 (34%), Positives = 147/285 (51%), Gaps = 5/285 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I +S YP +LL P L+V G L +A+VG+RA S YG + L+ Sbjct: 19 ISKESPEYPQKLLHYEGMPEILYVRGTLPDPRRPAVAIVGARAASPYGRMQAFRYARRLS 78 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV I SG+A GID AH+ AL+ G + AVLGNG++ +P + L +L + ++ Sbjct: 79 EEGVQILSGMAYGIDTEAHRGALEGEGGTWAVLGNGVDICYPSGNRALYQRILREKCGIL 138 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P Y FP RNRIISGL+ V++VEA +SGSL+TA+ AL+QG+ VFA+PGP+ Sbjct: 139 SEQPTGTRARNYFFPARNRIISGLADLVVIVEAREKSGSLITAQWALDQGKSVFAIPGPV 198 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 S G + LI GA + PE +L L + ++ +A + Sbjct: 199 TEELSMGCNKLIYDGAGIAYTPEILLRELGID-----CEKIVKVKTKNELGLATDLKLVY 253 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + V+ + ++ G +V LLEL+++G + Y Sbjct: 254 SCLDLQPKSVEFLIQKTGLSPEKVGGLLLELKISGLAREIGRHYY 298 >UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus RepID=A7GRG4_BACCN Length = 291 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 102/287 (35%), Positives = 155/287 (54%), Gaps = 7/287 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 E L L + + + ++ H + + +Q GL+ + + ++F + Sbjct: 4 KRERLLHLHYFLADHWKVLKKLLHMDPQLIDVYNFSSEQFEQYTGLSPKLSFELVNFLQT 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 + + LE+ + E YP L D P L+ +G+ L + AVVG+R Sbjct: 64 STPPQCMQHLEKNQTFYVTIWDEDYPRLLREIPDPPFVLYGKGQRGYLKNINTFAVVGTR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y + + L +G I SG A GID +AH+ A++ G +IAVLG+GL ++P Sbjct: 124 KPSLYSRESIQSILQPLINKGWLIVSGFASGIDTMAHRIAVEQEGATIAVLGHGLQYMYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + RL ++ ++ L++E+P PP + FP+RNRIISGL KG+LV+EA RSGSL+T Sbjct: 184 KENDRLY-AIWKKQMLLLTEYPPHYPPKKWYFPKRNRIISGLCKGILVIEAKARSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A ALEQ REVFALPGPI + G + LI+QGA LV ++ILE Sbjct: 243 ADFALEQNREVFALPGPIFVESACGTNQLIQQGAKLVQNAKDILEEF 289 >UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E7_LISMF Length = 286 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 12/288 (4%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M WL++ S S+ I + + + AQ + Sbjct: 1 MDFKQRHTWLKIASCKSISAKKRASIWQKLTEFDQYEMTTQTFAESFFPVDKLAQILMEL 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + LI + YP L + P LF +G + L +A+VG+ Sbjct: 61 ------ETAEACFFDDVTLIWILDDAYPALLREIYEAPPILFCKGNIDLLQQQAIAIVGT 114 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + LA +TI SG+A GID AH+A L G +IAVLG+G+N ++ Sbjct: 115 RQMSEYGRKACMKIASELAENKLTIVSGMAIGIDSTAHRATLNKQGATIAVLGSGVNKVY 174 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+++ LA ++ + G L+SE+ D ++FP RNRIISGL+ G +++EAA RSGSL+ Sbjct: 175 PKKNELLAKEIV-KEGLLLSEYLPDEEAKRWHFPERNRIISGLAIGTVIIEAAERSGSLI 233 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 TA ALEQ R+VFA+PG I +G ++LI++GA LV I+E Sbjct: 234 TADIALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNSNNIIEEF 281 >UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella RepID=D1BMP3_VEIPT Length = 408 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 9/312 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL------RQAQRFLSF 55 D L S+ ++ + R V + L + S Sbjct: 5 DDNIYIAGLQSLYNVGATYVRRFIEDFGSPYDAWQAVKKVENLKPYTHISTADKRAIASS 64 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF--QLAV 112 + + ++ + +++ + + +P L + P LF+ G L ++A+ Sbjct: 65 AKDEKLDYIIHKIDEYKMDVTTFLDKDFPSILNHIYNPPAILFMRGNRVLLDKRLNRIAL 124 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG R+ + L I SG ARGID H+ L G I V+G GL+ Sbjct: 125 VGARRCSLYGRNVARMLGKELGKYSTIIVSGGARGIDTHGHEGLLASQGYGIIVMGCGLD 184 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR +A+L +L+ G L+SE+P PP A +FP RNRIISGL +GV+VVEA SG Sbjct: 185 ITYPRENAKLFDRMLQNNGLLLSEYPPGTPPSAKHFPARNRIISGLCRGVIVVEAKSSSG 244 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+TA A+ +GR+VF +P + + ++G +L++ GA ++T E+I+E L Sbjct: 245 SLITADMAVSEGRDVFVVPCNLLDHTADGNKFLMRNGAYVLTGYEDIVEQYHLTLREYFS 304 Query: 293 APENSFYSPDQQ 304 + + + +++ Sbjct: 305 SEQKLLPTKNKE 316 >UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME16_9PORP Length = 384 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 165/372 (44%), Gaps = 17/372 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI-----ES 62 L + + + + + + A L R ++ Sbjct: 12 YALTQLKGVSLQLARHLIEFAGSATALWADPQALARLNSHVYTHLYPLLRDRAKLEETQA 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL-HALHSFQLAVVGSRAHSWY 121 L ++ YPP LL D P LF G+L L+VVG+R S + Sbjct: 72 LLQRTADLGILMVSIYDADYPPLLLQCADAPLILFYLGDLAPLHAEQTLSVVGTRKPSQH 131 Query: 122 GERWGRLFCETL--ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + L T VTI SGLA G+D V+HKAALQ ++AVL +GL+ I+P H Sbjct: 132 GVEDLQTIISHLPSVTDSVTIVSGLALGLDAVSHKAALQAGLPTVAVLAHGLHMIYPSNH 191 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA S++ GGAL+SE+P V P + F RNRI++GL++ LV ++A R GSL+TA Sbjct: 192 RNLARSIVSHGGALLSEYPAGVKPQRHQFVLRNRIVAGLTQATLVGQSAERGGSLITAHQ 251 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP------D 292 A + R V+ALPG + +EG + LI A L+T + E+L++ Sbjct: 252 AFDYDRAVYALPGRPSDRENEGCNNLIYNNIAKLITSATHLCEDLEWKKPDHEARSAVGS 311 Query: 293 APENSFYSPDQQDVALPFPELLANV--GDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 S + + + LL + + +D + ++ V EV +L LE G Sbjct: 312 MSHESKLNALRARLEPKTRPLLDLLIESGDGLSIDAICDQTLMGVDEVSFRLFLLESDGA 371 Query: 351 IAAVPGGYVRLR 362 ++ P G +L+ Sbjct: 372 VSLQPDGRYKLQ 383 >UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_DESMR Length = 455 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 120/326 (36%), Positives = 156/326 (47%), Gaps = 5/326 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLSF--PRK 58 + LRL + + RI A GL A L+ + Sbjct: 23 ECLACLRLRLQPGIGPRTVRRIFDRYDSAVAALADARSFGPQGLCPDDAAAALARGLTSR 82 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E+ L +P YP +L D P L+V G++ L +A+VG+R Sbjct: 83 AAETELAAAAAKGLTPLPYFHPAYPARLRELPDPPAMLYVVGDVTLLSGPCVAMVGARQC 142 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG LA GVT+ SGLA GID AH L G S+A+LG GL+ ++P Sbjct: 143 SRYGFGAAFDIAAGLAGAGVTVVSGLAYGIDRQAHLGGLAGPGRSVAILGTGLDLVYPDA 202 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + + L GGA+VSEF PP A NFP RNRII+G+S GV+VVEAA RSGSL+TAR Sbjct: 203 NLDVWRE-LAAGGAVVSEFAPGTPPRAANFPVRNRIIAGMSLGVMVVEAAERSGSLITAR 261 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFALPGP+ P G H L+ QGA LV ++I+ L L AP + Sbjct: 262 LALEQGREVFALPGPVNLPTFAGCHALLSQGARLVQTADDIVSALARELAPFVGAPRPAP 321 Query: 299 YSPDQQDVALPFPELLANVGDEVTPV 324 + + V P A D Sbjct: 322 PARAPRRVTPPVAASQAAPPDRPGRP 347 >UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVG1_9ACTO Length = 462 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 176/416 (42%), Gaps = 51/416 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL--------------- 46 D + +I+ + ++ + ++ V L Sbjct: 49 EDRQARAAWTAIAQPGEPVVGQVIEHFGVREALERVKFLAAKLPEIDDMMIRTVFQPVQL 108 Query: 47 ----RQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG 100 Q + + R+ ++E L + L+ +P + + P AL+V G Sbjct: 109 PASVAQIEGWALRLRELNLEMEYQLLSRDGGALVVPGDAAWPGIVDSLGAVAPLALWVRG 168 Query: 101 ELHALHSFQ----LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 AL + +A+VG+R + YG + L+ RG+ + SG A GID AH+ A Sbjct: 169 NPQALQALASEGAVALVGARCATHYGTDIAQEIAYELSERGIWVISGGAYGIDAAAHRGA 228 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L +G +I+V GL ++P +ARL + + +Q GA+VSE P P + F RNRIIS Sbjct: 229 LASSGKTISVQAGGLGNLYPAMNARLFSQI-QQTGAIVSEAPPSQRPAKHLFLTRNRIIS 287 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 LS+ V+VVEA RSG++ TA EQGR+V A+PGP+ + S G H LI++GA LVT Sbjct: 288 ALSQVVVVVEAGERSGAMSTANHGAEQGRQVAAVPGPVSSTASVGCHRLIREGAALVTNA 347 Query: 277 EEILENLQFG-----------------------LHWLPDAPENSFYSPDQQDVALPFPEL 313 EI+E + + D+ ++ ++ Sbjct: 348 AEIMELMFPLNVAGQSLFGVGGSAGKSISGVVSVSPQRDSTGQIPAPSLFAGLSSDGVKV 407 Query: 314 LANVGDEVT-PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVR 368 + + ++ V+ AG V ++L +EL G + G RLR R Sbjct: 408 IDVLSKTAWKSLEQVSRAAGLGTRTVQSELGLMELDGKVETR-KGRYRLRSKATAR 462 >UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillus RepID=C7XU50_9LACO Length = 293 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 152/296 (51%), Gaps = 8/296 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV--VLQQTGLTLRQAQRFLSFPRK 58 M E ++L L R+ A++ D + + + + + +RFLS Sbjct: 1 MQPKEFLIKLNVCRGLGIISKYRLWEIAAERYEFDDMVTITRIANINGKVRERFLSAWSS 60 Query: 59 SIESSLCWLEQPNHH--LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 Q N LI YP L P L+ G H L S LAVVG+R Sbjct: 61 ---QETETAYQRNCQMPLITIVDALYPELLKRIYCPPLVLYFMGNRHLLKSSCLAVVGAR 117 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y + + + R +T+ SGLARG+DG++H+ LQ G +IAV+GNGLN I+P Sbjct: 118 QMTSYARQSLQQLLPPVIQRHITVVSGLARGVDGLSHEITLQHGGRTIAVVGNGLNRIYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H RL + ++ G L+SE+PLD P L ++F RNRII+GL+ L+VEA RSGSL+T Sbjct: 178 PEHDRLQRQI-KRHGLLISEYPLDTPSLPHHFVERNRIIAGLADACLIVEARKRSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 A AL++ R V A+PGPI + S G + LI GA + +ILE L + L + Sbjct: 237 ANLALKENRNVLAIPGPINSEQSLGCNELIASGARPILNANDILEELGNRFYKLQN 292 >UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP7_9BACE Length = 303 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 13/305 (4%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQ---- 50 MVD E L +I + + + + Q+ G +R + Sbjct: 1 MVDEEFCVYWLNNIRGIGNTKISELMAIFGSACGVYNAGEQELKDAMSGSNVRFSHGDFD 60 Query: 51 -RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 + + L YP +L D P L+ +G L + Sbjct: 61 NLIACRNAEWVRREYESLVAKQIAFTYPGRADYPVRLGMIYDAPHILYYKGHLPDA-APS 119 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+RA S YG + +F LA GV I SGLA GID +A+ + G + AVLG+ Sbjct: 120 VAIIGARACSAYGRQIAEMFGRELARAGVQIVSGLATGIDTFGQRASAEAGGRTFAVLGS 179 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G++ +PR + L A + GG ++SE+P P A NFP RNRIIS L+ V+VVEA Sbjct: 180 GVDVCYPRSNIGLYADTMIHGG-ILSEYPPGTKPSAGNFPVRNRIISALADVVVVVEARR 238 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 RSG+L+T ALEQ +++ A+PG +G+ SEG ++L+KQGA +VT+ +ILE L + Sbjct: 239 RSGTLITVDAALEQNKDIMAVPGRVGDVLSEGCNYLLKQGAHVVTQTRDILEILGINIIN 298 Query: 290 LPDAP 294 Sbjct: 299 KKRKK 303 >UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella RepID=C8NEN5_9LACT Length = 288 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 13/290 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAK------QSHIDAVVLQQTGLTLRQAQRFLSF 55 ++ + + L + + + V T + + F Sbjct: 4 TKRKLLIGIAISEKLNSKQFYELFQKLNDDVSLIHPFVLGDVKFSLPEETSKWLETF--- 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +S ++ ++ YP +L P LF +GE L+ +A+VGS Sbjct: 61 ---DWLASFEKMKVEKVKVLTILDAEYPRRLKEIYLPPIVLFYKGEWSLLNERLVALVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS Y ++ + + L + + I SGLA+G+D +AH L+ +G +IAV+G+GL+ ++ Sbjct: 118 REHSNYAKQCTKTIVQDLVQKKIGIISGLAKGVDSLAHLECLKDDGKTIAVIGSGLDVVY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L + E+ G ++SE+PL PL ++FP RNRII+GLS GV VVEA RSGSL+ Sbjct: 178 PPENANLYKEIGEK-GLIISEYPLGSRPLKFHFPYRNRIIAGLSHGVCVVEANERSGSLI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 TA AL + REVFA+PG I + S+G + LI+ GA LV+ E I +NL + Sbjct: 237 TANIALSENREVFAIPGSIFSSHSKGTNQLIEAGACLVSSAETIDKNLHY 286 >UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSJ0_BACS4 Length = 289 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 149/287 (51%), Gaps = 6/287 (2%) Query: 1 MVDTEIWLRLMSISSLYG--DDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQRFLSFPR 57 M + + L Y + I S ++ L +Q + L++A++ + R Sbjct: 4 MKENLLLLH-YCCHGNYHLVKKISTINPTFLSLSTLEEKHLIEQLKIPLKRARQIIYLLR 62 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 SIE + N H + + YP L D P L+ +G L + L+VVG+R Sbjct: 63 NVSIEKLKEEYKNKNIHYVTIFDDDYPKLLKEIFDPPWILYYQGNSQYLSNTCLSVVGTR 122 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S R E + G+TI SGLA GID +AH+ ++ G +IAVLG GL+ ++P Sbjct: 123 HPSEIVYRELTEILEPVVKSGITIVSGLAIGIDSMAHELTMKKKGRTIAVLGYGLDWVYP 182 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + +L + Q +++E+P V P + FP RNRIISG SK VVEA +SGSL+T Sbjct: 183 KSNEQLLNDIKHQH-LVLTEYPPYVKPQRWQFPERNRIISGFSKATFVVEAQDKSGSLIT 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A A++Q R++FALPG I S G + LI+ GA ++ + ++ILE Sbjct: 242 ADLAVQQNRDIFALPGRIFEVTSVGTNKLIQDGAKMILQAKDILEEY 288 >UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BL39_9BACT Length = 378 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 14/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQR----FLSFPRKSIES 62 LRL ++ + +I L++++++ + K Sbjct: 12 LRLQALPGVGAKTARKIIAHYGSAHAFFESPRDSSIVLSVKESKTPSDYLHALYLKLATD 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 ++ + YP L +D P LF +G L +AVVG+R + G Sbjct: 72 EFDFILANKIQTFYFEDANYPYFLSLASDAPVLLFGKGHLDTGTKKIIAVVGTRKMTGMG 131 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + F E + I SG A+GID +AA + +I L +G I+P ++ Sbjct: 132 REFCEQFIEEIKPLDPVIVSGFAKGIDITIQRAAAEQGLQTIGCLAHGFKRIYPAQNRPY 191 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++EQGG +EF + L +F RNRII+GLS+ LVVE+A + G+L TA+ A Sbjct: 192 IKDVMEQGGF-YTEFFSGMHALPGHFVSRNRIIAGLSQATLVVESAKKGGALHTAQLANS 250 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R VFA+PG + S G + LIK A ++T +++ ++ + Sbjct: 251 YDRPVFAVPGRTTDFFSVGCNDLIKHLKAQMLTHSRDLINSMNWQDQPGIVLNMGLTCGT 310 Query: 302 DQQ------DVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + L + + VD +A + + L+ LEL G + + Sbjct: 311 ELETKDKATNHTAEESVLYQCLFSNGKMHVDQLASVLNWEIKVLYPCLMTLELKGGVRHL 370 Query: 355 PGGYV 359 PG + Sbjct: 371 PGQFY 375 >UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=3 Tax=Leuconostoc RepID=B1MYG1_LEUCK Length = 289 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 100/286 (34%), Positives = 145/286 (50%), Gaps = 1/286 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L L + R+ H++ + +T + +S Sbjct: 2 MNLRTQLLALTMTEGIGLVTRTRLLHFIISGNLPTQYPWSLETITRLAEPQQCMRIAQSY 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L + E YP L P LF EG L AL L+VVG+R + Sbjct: 62 DKALDRASTFQLPYLSYFDEAYPEALREIHQPPLILFYEGNLDALKLPSLSVVGTRLATP 121 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG R T+ ++G++I SGLA+GID +AH+ GV I V+G GL+ ++P RHA Sbjct: 122 YGLETIRHLLPTVISKGISIVSGLAQGIDVMAHQITFAACGVPIGVIGTGLDVVYPNRHA 181 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + G L+SE+P PL +FP RNRII+GLS LV+EA RSGSL+TA A Sbjct: 182 ALQKQI-ANSGLLISEYPAGSKPLRSHFPERNRIIAGLSSATLVIEAKKRSGSLITANLA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 L+ R+V A+PG I + ++G + L+ GA LV +PE+ILE++Q Sbjct: 241 LQNNRDVLAVPGSIFSETAQGTNELLSLGAKLVVQPEDILESVQLL 286 >UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7A4_9ACTO Length = 437 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 157/341 (46%), Gaps = 36/341 (10%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--------- 109 I L LE+ L+ ++P L P L+V G+ L Sbjct: 95 DIRRELEVLERLGGSLVLPGDAWWPQGLDELDQPPACLWVRGDPALLACRSDGADSTMRP 154 Query: 110 --------------------LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 LA+VGSRA + YGE+ LA G + SG A GID Sbjct: 155 SDPGRFRQDLVAQGPATGLSLALVGSRASTRYGEQVASQMAAQLADHGAVVVSGGAYGID 214 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 AH+ AL+ G +I+V G++ ++P +A L ++E GALV+E P P + F Sbjct: 215 AAAHRGALRT-GRTISVSAGGVDRLYPAGNATLLQEVIEH-GALVAEVPPGCQPGRHRFL 272 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNR+I+ +S+ +V+EAA RSG+L TAR A + GR + A+PGP+ + S G H L+++G Sbjct: 273 SRNRLIAAMSQATVVIEAAWRSGALSTARHAADLGRPLGAVPGPVTSMESAGCHRLLREG 332 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPELLANVG-DEVTPV 324 A+ VT+ +E LE + P+A + + + + +L + V Sbjct: 333 AVCVTDADEALELVLPLGLTDPEADKEADPARAGSGLLDGLDRSSAAVLDAMPARGAASV 392 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + +A AG EV L LELAG + P G+ R + Sbjct: 393 EALARSAGLAESEVRAALGLLELAGKVCRDPRGWWRRASSG 433 >UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomycetales RepID=A0LV60_ACIC1 Length = 391 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 15/369 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-KSI 60 + L ++ ++ + A + L++ L + A+ + + Sbjct: 24 TERLARALLSRVTEPGDRELAALLTRYAATEIVRD--LRRDRLPVTNARHWRTRLSTARP 81 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTD-------YPGALFVEGELHALHS-FQLAV 112 E+ L +E+ + +P QL P L++ G + +AV Sbjct: 82 EADLHAVERLGGCFVVPGDSEWPAQLDDLGRVPGEYSVPPVGLWLRGAGKLADADRTIAV 141 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSRA + YGE F LA RG + SG A GID AH+ AL G ++AVL G++ Sbjct: 142 VGSRAATGYGEYVAAEFAIGLAERGFLVVSGGAYGIDAAAHRGALAGGGATVAVLACGVD 201 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR +A L +L G L+SE+P P+ + F RNR+I+ L+ G +VVEAA RSG Sbjct: 202 VCYPRGNATLFHRILST-GLLLSEWPPGCAPMRHRFLVRNRVIAALASGTIVVEAAARSG 260 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLP 291 +L TA A + GR V A+PGP+ +P S G + L+++ +T ++++E + L Sbjct: 261 ALNTANRARDLGRHVMAVPGPVTSPLSAGSNQLLREPDVCCITRADDVVEIVG-RLDPSI 319 Query: 292 DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + +L V +A AG +P+V+ L L G Sbjct: 320 APTPGAPPSSARDRLDGVTRRVLDAVPARRSAGPAGIALAAGLALPDVLAALGRLAADGL 379 Query: 351 IAAVPGGYV 359 + G+ Sbjct: 380 VERTDAGWR 388 >UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z300_9GAMM Length = 380 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 111/368 (30%), Positives = 171/368 (46%), Gaps = 10/368 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIE 61 ++W ++ L ++ + G LR + R + + Sbjct: 12 DQLWFEFLATKMLDRASKRKLLAQGFTPPQLLEPHGTWPFDGAELRASLRVSKSRQVARL 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + + + YPP L +D P ALFV G+++ L +A+VG+R S Sbjct: 72 KPLLACHLLHWGRQSSGCDVYPPLLSGLSDAPLALFVSGDINCLSRPAIAIVGTRRPSRD 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + LA G + SGLARGID AH+ AL+ G ++AV+ G++ I+P H R Sbjct: 132 GLKLADQMGYQLAAAGFLVVSGLARGIDAAAHRGALRSGGQTLAVMATGMDRIYPSEHYR 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + Q GAL+SEF V P +FPRRNR +SGL +V+EA SGSL+TA A+ Sbjct: 192 LAEEVAAQ-GALLSEFCPGVVPHRGHFPRRNRTLSGLCLATVVIEAGHPSGSLITANAAV 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------HWLPDAP 294 EQGREVFA P + + G G L+ QGA L+ P ++E+L L D Sbjct: 251 EQGREVFAAPWSLFHRGGAGCLRLLSQGAQLIDTPAAVIEHLAVHLSGWAELTADALDYS 310 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 N+ + + +LL +GD + +A +++ + +LEL G++ Sbjct: 311 SNAGETVSLAPLEPAKRQLLTLLGDGEHDLASLASALQCSSRQLLAMVTQLELQGYVEQT 370 Query: 355 PGGYVRLR 362 G +R Sbjct: 371 SAGLRAVR 378 >UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TRF8_9MICO Length = 390 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 154/367 (41%), Gaps = 9/367 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + + I + + ++ R QR + Sbjct: 30 ERWARMAWSRIVEPETVSVRDWIAEHGAVESMQRLLAGSLVRDGRYDQRIAALDLDQARR 89 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVGSRAHSWY 121 +L L+ ++ + +P L P ++ G ++ +A+VGSRA + Y Sbjct: 90 ALDRLQ---VRVVIPGDDEWPLGLDELKVPPLCIYARGLCELSITDGSVAIVGSRAATHY 146 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G E LA RGVT+ SG A GID AH+ AL G +IAVL GL+ +P+ H Sbjct: 147 GLNVAADLGEGLAQRGVTVVSGAAFGIDAAAHRGALAGGGPTIAVLARGLDRAYPQAHEG 206 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + + G +VSE PL P F RNR+I+ +S G +VVEA LRSGSL TA+ A Sbjct: 207 LLREIAD-IGVVVSELPLGWAPYRARFIARNRLIAAMSVGTVVVEAGLRSGSLNTAKYAR 265 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 R V A+PGP+ + S G H L+++ A LVT+ E+L+ + L Sbjct: 266 SLVRHVAAVPGPVTSVQSAGCHKLLRETEATLVTDAAEVLDVMGRL--SLDAVGLARAPV 323 Query: 301 PDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + ++ + + V + + +++ L L + G + V + Sbjct: 324 TPESELDPVALGVWSAVPVRNPADLAELQRLTALDPTTLLSALGRLTMLGLVVRVGERWR 383 Query: 360 RLRRACH 366 ++ A Sbjct: 384 KVPAARR 390 >UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C495A Length = 396 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 122/398 (30%), Positives = 180/398 (45%), Gaps = 38/398 (9%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFP 56 M D L L + L + + ++Q + + A + Sbjct: 1 MSDVNDHLALALVPGLGPKLTAALLERFGTAAAALRATAADLVQIPHIGEKLATALAAAL 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R +I+S L LE+ + S YP L A P L+V G A + +VG+ Sbjct: 61 RAVNIDSELALLERHGVRPVALGSSEYPAPLAAVPAPPPLLYVRGAWVAADVNAIGIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+R L G T+ SGLARGIDG AH+AAL G +IAVL GL++I+ Sbjct: 121 RSCTAYGKRLAEQISRDLVRAGFTVVSGLARGIDGAAHRAALAAGGRTIAVLAGGLSSIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P HA LAA + G LV+E P+ V P FP RNRIISGLS+G++V+EA +SG+L+ Sbjct: 181 PPEHADLAAE-VAGNGCLVTETPMAVAPQPGMFPARNRIISGLSRGIVVIEANAKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL----- 290 TA A EQGRE FA+PG + + S G L+++GA LV ++I+E+L+ Sbjct: 240 TATHAAEQGRETFAVPGNVDSAASAGCLELLRKGARLVRGADDIIEDLKGIATADYPAGS 299 Query: 291 --------------------------PDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 A P + + + + D+ Sbjct: 300 MDRGLAPAGTQYKGAQGHPSQEDAVTGRAVREDVPRPPAPILDVTQQRVFDALADK-RHA 358 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 D +A G V E+ L++LEL + +PG + R Sbjct: 359 DELARELGVAVGELSRILMQLELKKVLRRLPGNFYERR 396 >UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales RepID=B2IEN8_BEII9 Length = 429 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 119/417 (28%), Positives = 166/417 (39%), Gaps = 63/417 (15%) Query: 2 VDTEI--WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 + E WLRL + + + S A V L R+ + Sbjct: 15 DERERFDWLRLSRSEMIGPRTFLSLLDRYRSASSALAAVPD---LARRKGRPIKLADTSD 71 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +E L I YPP L P + V G +L ++A+VG+R S Sbjct: 72 VERECEALAAAGGSFIALCEPDYPPLLRLIDAPPPIIAVRGRRESLARAKVAIVGARNAS 131 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + +A G I SGLARGID AH+AAL+ +IAVL GL I+P H Sbjct: 132 AAGLVFTERLSREIAKAGYVIVSGLARGIDAKAHQAALETG--TIAVLAGGLGRIYPAEH 189 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A L LL GA +SE P +FPRRNRI+SGLS G++VVEAA +SGSL+TAR Sbjct: 190 APLLERLL-GEGAAISEMPFHWEARGRDFPRRNRIVSGLSLGLVVVEAARQSGSLITARF 248 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------------- 283 A +QGR++FA+PG +P +EGP+ L+++GA T+P+++++ L Sbjct: 249 AADQGRQIFAVPGSPLDPRAEGPNDLLQEGATFCTKPDDVIDALANQRNHVARPGFAEAS 308 Query: 284 -------------------QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 A + P + D Sbjct: 309 APSDGADLLWDEIDFLETDASVFRKSIKAEWDEETVPTPAAALFSDESAVLIASDGQDHP 368 Query: 325 DV--------------------VAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 D +A A P E+ LL LEL G + V L Sbjct: 369 DQASLKERIIALLGPAPVSVDELARAAASPPGELQAVLLILELEGRLTRHGASLVSL 425 >UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9M9_9CHLA Length = 320 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 8/299 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFP 56 M D L I L + + + G + + ++ Sbjct: 1 MDDLIALSILTQIPYLGSVKIRLLIGYFGSALTALEAEVKVIETILGTKSKCLPYWTTWK 60 Query: 57 RKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + +L + +L+ + YP QLL +D+P L+V+G+ +A++GS Sbjct: 61 ENDDWKRNLELAAKEGVYLVSYTDQAYPQQLLQISDFPVLLYVKGKWPIEQFKGVAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG F LA G+ + SGLA+G+D AH+ ALQ G ++AV+G+GL+ ++ Sbjct: 121 RQASQYGRELAYSFGMDLAGLGIVVVSGLAKGVDTAAHQGALQT-GKTLAVIGSGLSHLY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA L+E+ GA+++E+P+ PP NFP+RNRI+SGL++ V+++EA + SG+++ Sbjct: 180 PYENRDLA-RLIEREGAVITEYPMLTPPNRQNFPQRNRIVSGLAEAVVLIEAPVVSGAML 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 T R + QG+++ +PG G H LI++G A V ++I+ + GL Sbjct: 239 TMRKGILQGKKLLVIPGRANEDSFSGNHLLIEEGKAHPVKSAKDIMAQVDKGLRSKEQQ 297 >UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium jeikeium RepID=C8RTT5_CORJE Length = 396 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 24/354 (6%) Query: 32 SHIDAVVLQQTG-LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL---- 86 + A + ++ G L+ A + L+ + + +P +L Sbjct: 42 QAVAAALARRGGKLSEALAGSTSQRYEQDPTRDAELASARGWRLVTPEDDEWPAELTASF 101 Query: 87 --------------LATTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFC 130 P AL+V G+ L L + VVG+RA + YGE+ R F Sbjct: 102 VRMADSGADHDSSVRGQAAAPFALWVRGDARLDTLVRRSVTVVGTRAATRYGEQVTRSFA 161 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 LA G ++ SG A GID +AH+AAL ++ V+ GL+ +P+ HA L ++ G Sbjct: 162 GDLADAGFSLISGGAIGIDAIAHRAALDSKMPTVVVMACGLDVSYPKAHANLFEQIVGSG 221 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G L+SE+P PP + F RNR+ + L + LVVEA RSG+L T A + +FA+ Sbjct: 222 GMLISEYPPGTPPARHRFLTRNRLAAALGQATLVVEAPQRSGALNTLNWAEAFVKPIFAV 281 Query: 251 PGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLH--WLPDAPENSFYSPDQQDVA 307 PGP+ + S G I+ A L +++E L L E+ + P + +A Sbjct: 282 PGPVTSHASLGCLDRIRTARATLAVSARDLIEELTPLGEQMALGLGQEDRSFLPSWEHLA 341 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + L + + + E G P V+ L +LE G + ++R+ Sbjct: 342 IIDAAALPSGKGPEGRLPQLVEATGLPARTVIRCLRDLEAMGRLRREADRWIRV 395 >UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LNF2_THEM4 Length = 264 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 90/252 (35%), Positives = 144/252 (57%), Gaps = 11/252 (4%) Query: 37 VVLQQTGLTLRQAQRFLSFPRKSIESSL-----CWLEQPNHHLIPADSEFYPPQLLATTD 91 + G +L++ ++ L+ ++ + L WL + + L+ E YP L + Sbjct: 6 AIWHYLGHSLKEIRKKLALVKQVEKDELYFKLKSWLSKEGNFLVTYFDEDYPESLKNIWN 65 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF +G L A+VG+R + YG + F + L++ I SG+ARGID Sbjct: 66 PPVVLFGKGNKELLSKKSFAIVGTRLPTEYGRKVAYSFSKRLSSY-FVIVSGMARGIDAF 124 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AHK A + +IAVLGNG++ +P+ + L ++ + G +VSE+ P NF R Sbjct: 125 AHKNARE----TIAVLGNGVDYCYPKENRELYLKII-KEGCVVSEYLPWERPRRDNFRAR 179 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NRII+G+S+GVL+VE L+SG+++TA AL+ G++VF +PG I + S+ P++LIK GA Sbjct: 180 NRIIAGISEGVLIVEGKLKSGTMITANYALDFGKDVFCVPGNIYSENSQTPNFLIKNGAF 239 Query: 272 LVTEPEEILENL 283 LVT P++I+E Sbjct: 240 LVTNPDDIVEYY 251 >UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZG0_9ACTO Length = 445 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 111/374 (29%), Positives = 157/374 (41%), Gaps = 20/374 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 D L + + + D + GL R + R P Sbjct: 75 DRFARAALSRVIEPGDPAALTTFAGLTPLEIWDLLHSTAPGL-ERWSTRL---PHVDPAR 130 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEG--ELHALHSFQLA 111 L I + +P QL TD P L+V G L L + +A Sbjct: 131 DLDRAHAAGGRFIIPGDDEWPDQLEVLTDAGQQSRRGGVPFGLWVRGTPNLRELLANSVA 190 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+RA S YGE L G + SG A GID AH+ AL +G +IAVL G+ Sbjct: 191 IVGARACSSYGEHTAAELAAGLGDHGTAVVSGGAYGIDAAAHRGALASSGTTIAVLACGV 250 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P+R++ L + + G L+SE P P F RNR+I+ + G +VVEAA+RS Sbjct: 251 DVSYPKRNSALFDRIAAE-GLLLSELPPGCSPTKLRFLARNRLIAAATLGTVVVEAAIRS 309 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWL 290 G+L +A A + GR V A+PG + + SEG H LI++ A L T +ILE + L Sbjct: 310 GALNSAGWAEQCGRAVLAVPGAVTSRMSEGAHLLIRERNATLATSVADILEAISPLGEHL 369 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 P + D D L L V P +A AG + V L L+ A Sbjct: 370 TTYPHAAPTPIDALDHDL--RRTLDAVPVLRPAPAHRIAITAGLDLATVQECLETLDQAH 427 Query: 350 WIAAVPGGYVRLRR 363 I P G+ R+ Sbjct: 428 LIEYTPTGWHLTRQ 441 >UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Marinomonas sp. MED121 RepID=A3YCI7_9GAMM Length = 446 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 177/422 (41%), Gaps = 68/422 (16%) Query: 7 WLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 WL L I + + R+ H + + + L R +P + + + Sbjct: 20 WLTLSFIKGVGPARLDRLFTYIHSLETSQPKIEASKLKETINLELLLRL-KWPLATAQEA 78 Query: 64 LCWLE---------------------QPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + +L+ P HHL+ YP +L P L+V G L Sbjct: 79 ISYLQDGRVCDRLSEQLSSTQTWLDVSPQHHLLMRTERQYPDELRQIDVAPIFLYVTGNL 138 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 AL + +LA+VG+R S YG + + + G+ + SG A GID AH+ AL G Sbjct: 139 KALETKKLAMVGARKASQYGLETAYKLAQQIGSLGIGLVSGGAIGIDSAAHQGALAAAGS 198 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQG-GALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +I V+G+GL +P+ + L +LE G L+SE+PL A FP RNRIISGLS G Sbjct: 199 TIVVMGSGLLHPYPKSNQALFNRILETNSGCLMSEYPLHTKVQARLFPARNRIISGLSLG 258 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 V+VVEA +SGSL++A AL+ R+VFA+PG I + S+ LIKQGA L+T+ E+++ Sbjct: 259 VIVVEAGFKSGSLISANYALQHNRDVFAVPGRITDKSSDACLDLIKQGAKLITQVEDVIN 318 Query: 282 NLQFGL----------------------------------HWLPDAPENSFYSPDQQDVA 307 + D +++ Sbjct: 319 EFSQLEIMSKLSPLIPHDLKMKKKINVYPRLQEAQNNDVSRETQVEIQKIPMLYDPNNMS 378 Query: 308 LPFPELLANVGDEVTPVD--------VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +L + + + D + G + EV+ ++LEL I + GY Sbjct: 379 ESAIMVLNRIDEMLLEPDGKNEFELNQLVSMTGLAIDEVMQTCMQLELEELIDPLMTGYA 438 Query: 360 RL 361 R Sbjct: 439 RR 440 >UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus RepID=C9B199_ENTCA Length = 292 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 141/281 (50%), Gaps = 4/281 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-QAQRFLSFPRKSIESSLC 65 ++L + +I + ++ + + + + Q + + + Sbjct: 13 LIKLYYCQGIGLQGCWKIIWHWLETKEMNCSLEEMIAIGVLPQHRAVFRRSWERLTDE-H 71 Query: 66 WLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 ++ + S YP L D P LF EG L L + + VG+R S Y + Sbjct: 72 IAQKMGAQNYLTFFSAEYPMLLRQIADPPLMLFYEGNLQLLQTTMIGFVGARTASLYARK 131 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 L T TI SGLA G+D AH++A++ G +IAV+ +G++ +P RL Sbjct: 132 VCEKLIPPLVTENYTIVSGLANGVDSFAHESAIRNRGQTIAVIASGMDHCYPSSSYRLFQ 191 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + Q ++SE+P D P Y+FP RNRII+G+SKGV V+EA RSGSL+TA+ A+E G Sbjct: 192 QI-RQEHLVLSEYPHDTKPQRYHFPLRNRIIAGISKGVCVIEAKERSGSLITAQLAMENG 250 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 REVFA+PG + + S+G H LI+ GA +IL+ L F Sbjct: 251 REVFAVPGEMISDQSKGCHRLIQDGAKCTISVSDILQELAF 291 >UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus plantarum RepID=C6VQH8_LACPJ Length = 288 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 7/291 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + +RL + MVR+ + + + LT Q RF + + Sbjct: 1 MQLRSLLIRLHLAHGIGYAGMVRVLQHCRQVQTVVTDPRRLGKLAHLTASQQGRFTADWQ 60 Query: 58 KSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q + + + YPP LL P LF+ G+ L + QLAVVG+R Sbjct: 61 SMAFQQRLKRHAQLDI--LTILDDDYPPALLEAYQPPLVLFLRGQRALLTTRQLAVVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y ER LAT +TI SGLA+G DG AH+ AL+ N +I V+G GL+ +P Sbjct: 119 QATSYAERVTTQLLAPLATAKLTIVSGLAKGADGFAHRTALRFNLPTIGVIGTGLDISYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R+H L + Q G L+SE+PL V P Y+F RNRII+GL + V+VVEA SGSL+T Sbjct: 179 RQHRDLQQQI-SQVGLLISEYPLGVGPEPYHFVARNRIIAGLCQTVIVVEAQAHSGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 A +L+ R V A+PGPI P S G + LI GA V I+E + Sbjct: 238 ANISLQNNRNVLAVPGPIDAPFSVGCNQLIVAGAKPVLNSRHIIEEFLPKI 288 >UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTI1_9SPIO Length = 318 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 4/285 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 ++++ L S L G + + +A + + + ++++ R S+ + +E Sbjct: 9 EKRKLYIALSYCSFLKGSERLLLARTLDTLQALTVSSIDTLSRIVQRSFRTRSYKPELLE 68 Query: 62 SSLCWLEQP----NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++ E ++ D +PP L D P L+ G L + A+VG+R Sbjct: 69 QAVEKAESLMKYCRINMTFYDDTDFPPLLREIPDAPFLLYYRGVLPKADTPAAAIVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + G+ + SGLARGID AH+ AL+ G++ AVL GL+ ++P+ Sbjct: 129 PTGNGIKAALQLGTECGHAGIPVISGLARGIDTFAHRGALEGGGLTTAVLACGLDRLYPQ 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +ARLA +LE GG ++SE+ PPLAY FP+RNR+ISGL++ +V+EA +SG+L+TA Sbjct: 189 SNARLAGRILETGGCILSEYAPGEPPLAYRFPQRNRLISGLARATVVIEAPAKSGALITA 248 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 ALEQGR+V G + + G L + GAI V ++L Sbjct: 249 DFALEQGRDVCIHGGMTDSVQNTGCKKLAEDGAIPVEHAGDLLRE 293 >UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisella tularensis RepID=A4KPU6_FRATU Length = 245 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 1/245 (0%) Query: 95 ALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 L+ G L+S QLA+VG+R HS YG+ C L +TI SGLA GID +AHK Sbjct: 2 ILYCSGNSDLLNSQQLAIVGARNHSSYGKNVTAKLCADLKDSKLTIISGLAYGIDTLAHK 61 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRI 214 A+ N +IAV+G G++ ++P + L ++ G ++SEFPL PL YNFP+RNRI Sbjct: 62 YAIDNNLSTIAVVGTGVDVVYPSSNRELYNKIINTNGLIISEFPLGTGPLLYNFPQRNRI 121 Query: 215 ISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVT 274 ISGLSKGV+VVEAA +SGSL+TA LEQ +EVFA+PG I + S+G + LIKQGA LV Sbjct: 122 ISGLSKGVVVVEAASKSGSLITAELVLEQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVC 181 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 +ILE + + + ++ + + +L ++ E+T +D + ++ P Sbjct: 182 NVNDILEEIDIASNTSQTSSTDNQVNK-IISLNESERIILGSIDRELTTIDKIIIKSKLP 240 Query: 335 VPEVV 339 +V Sbjct: 241 YNQVT 245 >UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Bacillus halodurans RepID=Q9KA22_BACHD Length = 302 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 10/291 (3%) Query: 1 MVDTEIWL-RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF 55 M L L S+ S+ + +I H+ + I Q GL+ ++A+ Sbjct: 1 MSSRAKRLTHLASLPSMSRALLKKILHFDETLTVIFKQSHVQLSETYGLSTKKARHLYEH 60 Query: 56 PRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVV 113 R+ + E+ + + YP L D P LF G ++ L +LA+V Sbjct: 61 LRRVSTDFWSEYYEKKQIVPVTIFDKGYPNLLKEIYDPPFVLFCRGRMNTLYSEKRLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S G + L L G I SG A G+D AH+ ++ G +IAVL +G + Sbjct: 121 GTRKTSTTGLKSLELLIPPLLQDGWVIVSGFAAGVDIHAHQLTVKNGGQTIAVLAHGHDN 180 Query: 174 IHPRRHARLAA-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P H A ++ Q ++SE+P V P + FP RNRIISGL G +V+EA +SG Sbjct: 181 LYPAAHRPFAEHEMVSQ--LMISEYPPYVKPRPWQFPERNRIISGLCAGTVVIEAKEKSG 238 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 SL+TA ALEQGR+VFA+PG I N + G + LI+QGA L+ ++I+E L Sbjct: 239 SLITADQALEQGRDVFAVPGAITNQKAAGTNQLIQQGAKLIQRADDIIEEL 289 >UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=C9BS90_ENTFC Length = 286 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 4/286 (1%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRK 58 M E L+L + +A+W+ + + + + R + Sbjct: 2 MYQIEENLLKLAYTKGISSQGKWALANWMMQYPYKEIGFEDIIKIGKITKHRELFRKSWQ 61 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 I ++ ++ I YPPQLL T P LF G+L L L+VVG R Sbjct: 62 EIHANWGKIQSKQ-SFITCFDPKYPPQLLHLTYPPIVLFYNGDLSLLSCNMLSVVGGRHT 120 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S ++ + + G I SG A+GID H+AA+ G +IAV+G G+ ++P Sbjct: 121 SALAKKTVYYLLKPVIEAGYVIVSGCAKGIDTYGHQAAISHGGRTIAVIGTGIEQVYPAE 180 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ L+SE+P P + FP RNRII+ LSKG V EA +SGSL+TA+ Sbjct: 181 NRDL-QEVIANDHLLLSEYPPQSGPKKHCFPMRNRIIAALSKGTCVFEAKKKSGSLITAQ 239 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 AL+ GR VF++PG I S G H LI+ GA+ E+IL + Sbjct: 240 QALDLGRTVFSVPGNILTEHSTGCHHLIQDGAVCTVSGEDILAEFK 285 >UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A932_9GAMM Length = 375 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 120/377 (31%), Positives = 175/377 (46%), Gaps = 34/377 (9%) Query: 1 MVDTEIWLRLM----SISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M + + L I L G + + + + Q + Q + Sbjct: 4 MTREQFQILLSWSGARIQGLGG-----LLREYSSPDLLFSADWQSEPVKE-QLSTLPNAT 57 Query: 57 RKSIESSLCWLEQPNHH-------------LIPADSEFYPPQLLATTDYPGALFVEGELH 103 + + + + N IP +E YP L A D P LF +G+ Sbjct: 58 QSMLLRARKNWPRRNPRGYSSGSDPGGSQAFIPLGAEEYPDALYAIPDPPPWLFCQGDPA 117 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +A+VGSR S G R R LA G TI+SGLA GID AH+ AL+ G + Sbjct: 118 CLAQPAVAIVGSRRASHGGLRAAREIAGRLAAAGYTISSGLALGIDAAAHRGALET-GRT 176 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVL +GL P RH LAA + G +VSE P VPP + FPRRNRIISGL++ + Sbjct: 177 VAVLASGLEQASPLRHRALAAEIAAS-GCVVSELPGPVPPSKHQFPRRNRIISGLTQATI 235 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +VEAAL SGSL TA ALEQGREV+ LP I + G LI+ GA +T +++ Sbjct: 236 IVEAALPSGSLHTAAAALEQGREVYTLPWSIFHEQGAGCRRLIRDGATPITAMDDLSALF 295 Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLL 343 +P++ P +L +GD+ + + + VP+++ L Sbjct: 296 PGVAP---------VAAPEEIAPTGPAARILRLLGDDGLSLRALHDAMDMSVPDLLALLS 346 Query: 344 ELELAGWIAAVPGGYVR 360 +LE+ GW++++ G Y R Sbjct: 347 DLEVQGWLSSIDGRYCR 363 >UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUG3_9GAMM Length = 374 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 126/363 (34%), Positives = 177/363 (48%), Gaps = 7/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLSFPRKSI 60 D WLRL+ L + + + A+ GLT L + + Sbjct: 11 DDARWLRLLDPDLLSPLQRRVLFSASLTPAELLALPPGDWPGGLTA-LRSTILGAIERPV 69 Query: 61 ESSLCWLEQPN--HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + L P+ HLI YP L +D P ALF G L AL +++VG+R Sbjct: 70 AAGLKCAAAPDAQVHLIALGDSLYPKLLRECSDAPPALFAVGRLAALGDPGVSIVGTRNA 129 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S +G R G F +A+R + + SGLA GID AH+ A+ G +IAVL G++ ++P R Sbjct: 130 SLHGLRTGTEFAAFMASRNIVVVSGLALGIDAAAHRGAIDNGGSTIAVLPTGVDRVYPAR 189 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++ E+ GAL+SEF P NFPRRNR ISGL+ G LVVEA SG+L+TA Sbjct: 190 HRALAEAITEK-GALISEFVPGTVPHPGNFPRRNRTISGLTPGTLVVEAGRPSGTLITAT 248 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A +QGREVFA+P + G EG L+ GA L P +++ +L G P Sbjct: 249 AAAQQGREVFAVPWSRYHRGGEGCLALLSDGATLAHSPAQVVHDLAPGYAGQQLLPGVEA 308 Query: 299 YSPDQQDVALP-FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + D+ + LLA +GD V+ +G + E ++ ELE+AG I G Sbjct: 309 RAGDRSRCSADGEDPLLALIGDGCHIPQVLQRASGLRIHEFQRRITELEIAGLIERDTMG 368 Query: 358 YVR 360 R Sbjct: 369 IRR 371 >UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB2_CORK4 Length = 435 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 25/386 (6%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQAQRFLSFP-RKSIE 61 W L + ++ + + + A + + L + S Sbjct: 51 AWAYLNRVVEGPNAHLLALIWESGESDPVSAAIRIIRRDPSLPPKVLSATESRCGWFQPL 110 Query: 62 SSLCWLEQPNHHLIPADSEFYP-PQLLATTD----------------YPGALFVEG-ELH 103 + L I D + +P P L + P L+V+G Sbjct: 111 ADLHSAASVGACFITPDDDAWPGPVLAESFHVSRTADGAKSHHDDAIPPHGLWVKGGNAR 170 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 AL + VVG+RA + YG AT G T+ SG A GID AH+AAL+V + Sbjct: 171 ALTEKAITVVGTRAATRYGNAVAADIGAECATHGWTVVSGGAFGIDISAHRAALRVGHST 230 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A++ +G++ +P H + + G +++E+P P + F RNR+ + L +GV+ Sbjct: 231 VAIVAHGIDVTYPAAHRTEFNDI-AREGVVITEYPPGTRPARHRFLTRNRLSAALGQGVV 289 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILEN 282 V+EA RSG+L T A G++VFA+PG + + S G H LI++G A L+ +++E+ Sbjct: 290 VIEAGYRSGALNTVSWAETMGKQVFAVPGAVTSRSSHGCHRLIREGRAELIESGADLIES 349 Query: 283 LQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 L DA E + + D Q + P + V + + +A +G P+ + +T Sbjct: 350 LSPLGTLDSDAQLEMDYPATDVQRLDRPSLRVYDAVSGKRSDAAAIAASSGLPLVQTMTI 409 Query: 342 LLELELAGWIAAVPGGYVRLRRACHV 367 L EL G I+ + R A V Sbjct: 410 LCELRDKGLISRSGNLWERDTAASTV 435 >UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4B8_GEMAT Length = 348 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 145/355 (40%), Gaps = 22/355 (6%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 L L ++ + + + + A + RQ+ Sbjct: 10 ACLALQTLPKMGDVSVRGLVEAHGSANAALASLPPAVVAAARQSAASSV----------Q 59 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + H++ E YP +L D P LF G + +A+VG+R S YG R Sbjct: 60 LATRTGAHIVALPDEHYPARLRELRDAPAVLFARGSVDIAAPPAVAIVGTRTASGYGLRV 119 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 R A G+++ SGLARGIDG AH+AAL G ++AVLG G++ +P+ H L Sbjct: 120 ARSIATACARAGISVVSGLARGIDGAAHEAALAAGGRTVAVLGTGIDITYPKSHRLLQER 179 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + G ++SE A FPRRNR+I+ L+ +VVEA SG+L+TA A+E GR Sbjct: 180 I-AHEGLVLSEQTPGDAGHAGTFPRRNRLIAALADVTVVVEAGEGSGALITADHAVELGR 238 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 V +P I + G + L+K A + P+++L L + Sbjct: 239 TVACVPNAIDVATARGSNALLKAHAEPILSPDDVLRLLD-----------MTPSPTQGPA 287 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + V VA+ G + L LE+ G + G +R Sbjct: 288 LDGVSARCWHAVQQGALTPVEVAQHTGLSTRDATAVLALLEIDGLLVFDTSGRIR 342 >UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR54_9ACTO Length = 468 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 138/305 (45%), Gaps = 12/305 (3%) Query: 73 HLIPADSEFYPPQLLAT-TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCE 131 + +P L P L+ G+ L AVVGSR S YG + Sbjct: 165 GFVMPGDPLWPAALDDLGDTRPLGLWFRGDGKVLARAGAAVVGSRDSSPYGVKIATDVAY 224 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 LA GV + SG A GID AH+ AL +G ++AV G++ +P HA L +L +GG Sbjct: 225 ELADSGVNVVSGGAFGIDVAAHRGALAADGYTVAVSACGVDRYYPASHADLYLEILRRGG 284 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 A+ SE P P + F RNRII+ LS+ V+VVEA RSG++ TA A+ GR V A P Sbjct: 285 AICSEAPPGAAPHKHRFLSRNRIIAALSRAVVVVEAPFRSGAISTAHHAMSIGRPVGAFP 344 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE---------NSFYSPD 302 GP+ +P S G H L+++GA VT+ E+LE + + Sbjct: 345 GPVTSPRSSGCHRLLREGAACVTQIREVLELMGMEAKLGGQPGPGEPPTPGGLQTERQLA 404 Query: 303 QQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + P + VA AG V E +T L LE G A G + +L Sbjct: 405 LDVLDPLASRVCEALPVSRGAPAEKVAAVAGVSVTEALTGLGRLERQGIAARNAGLW-KL 463 Query: 362 RRACH 366 R Sbjct: 464 ARKGR 468 >UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BJ85_SANKS Length = 399 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 164/395 (41%), Gaps = 38/395 (9%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-------------DAVVLQQTGLTL- 46 M+ W I+ + V + V + + Sbjct: 1 MLARAAW---SRIAEPADRAAGALLRTVGPVDALGWLQSAGTGDDAVRHAVSRLCEVIGV 57 Query: 47 -------RQAQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PG 94 R A + + L L + L+ + + +P LL D P Sbjct: 58 DDRTTVRRLAAAVARWAPRVATTDPARDLDNLARLGGRLVVPEDDEWPTGLLDLGDEGPA 117 Query: 95 ALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 L+V G + ++VVG+RA + YG+R L G T SG A GID V Sbjct: 118 CLWVRGTGRVDETLRRTVSVVGARASTDYGDRVAGELSVGLVAAGCTTVSGGAYGIDAVV 177 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 H++ L V+G ++A L G + ++P +A L +L+ G ++SE P P F RRN Sbjct: 178 HRSTLAVDGTTVAFLAGGPDRLYPAGNADLLRGVLDGAGLVLSELPPGSVPSRVRFLRRN 237 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AI 271 R+I+ + +VVEAA RSGSLVTAR A GR V A+PGP+ GS G H L+++G A+ Sbjct: 238 RLIAASGRSTVVVEAAWRSGSLVTARLAAGIGRPVGAVPGPVTAAGSAGCHRLLREGVAV 297 Query: 272 LVTEPEEILENLQFGLHWL-----PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVD 325 VT+ +E+LE L A + + + + P + PVD Sbjct: 298 CVTDVDEVLELSGAAGEGLDGIAATGALRDDADTRETDGLDAPGKAAYDALPLRRPVPVD 357 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + +G E++ L LE+ G GG+ R Sbjct: 358 ALVRSSGLAPHELMAALGVLEVRGLAVRSTGGWSR 392 >UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSA7_9CORY Length = 391 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 107/386 (27%), Positives = 162/386 (41%), Gaps = 30/386 (7%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA-VVLQQTGLTLRQAQRFLSFPRKS 59 M E W L + + + I A V + + L + + Sbjct: 1 MSSPESWAYLSRVIEGPSRHLQALLAAGRDADEIAAGVRARASWLGALARETESRYTFNQ 60 Query: 60 IESSLCWLEQPNHHLIPADSEFYPP----------------QLLATTD---YPGALFVEG 100 + L L+ D + +P L P AL+V G Sbjct: 61 PQRDLEAAHGAGFSLVTPDDQGWPAEAIADAFVTGVAVSQANLAEAKPDGVAPHALWVSG 120 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 L+ L + +A+VG+RA + YG LA G T+ SG A GID AH +AL Sbjct: 121 ETNLNQLFARSVAIVGTRASTAYGHHATADLVTGLAGFGYTVVSGGALGIDSTAHDSALA 180 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 ++AV G +PRR+A L + A+++E+P V P + F RNR+++GL Sbjct: 181 AGAPTVAVAACGPGVTYPRRNAELFRRVT----AVITEYPPGVTPDRHRFLTRNRLVAGL 236 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPE 277 S+G ++VEAA RSG+L T A R V A+PGPI PGS G + I++G A +V + Sbjct: 237 SQGSVIVEAAFRSGALNTLTWAHYFNRRVMAVPGPILGPGSLGTNLAIQEGRADMVLNAK 296 Query: 278 EILENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLAN--VGDEVTPVDVVAERAGQP 334 +I L PDA E F + D Q ++ + + + +A R+G Sbjct: 297 QIHALLNRVGEVDPDAQLELDFAADDIQRLSRNELRVYDAVPLATRGATAEDIATRSGLG 356 Query: 335 VPEVVTQLLELELAGWIAAVPGGYVR 360 V V L+ELE G + + R Sbjct: 357 VALTVHILVELEARGLVVRTGRQWRR 382 >UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyces RepID=D1WZE4_9ACTO Length = 442 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 147/375 (39%), Gaps = 15/375 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTGLTLRQAQRFLSFPRKS 59 + L + + R + L A R + ++ Sbjct: 63 ERLARAALTRVLEPGDERAGRWLRRTGPVELMRRLTVDDGSAERLPGMTAARLGGYRLRA 122 Query: 60 IESS----LCWLEQPNHHLIPADSEFYPPQLLATTDYPGA-LFVEG--ELHALHSFQLAV 112 + L + + +P QL D L+V G +L +AV Sbjct: 123 AGAEPGRDLAAVAAVGGRFVCPGDREWPSQLDDLGDARPVGLWVRGRPDLRLWSLRSVAV 182 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+RA + YG LA RG + SG A G+DG AH+ AL G + AVL G++ Sbjct: 183 VGARACTPYGAHMAAALGSGLAERGWVVVSGAAFGVDGAAHRGALGAGGATTAVLACGVD 242 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR HA L L Q G +V+E P P F RNR+I+ L++G +VVEA RSG Sbjct: 243 VAYPRGHAELLGR-LAQQGLIVAELPPSSHPTRSRFVLRNRVIAALTRGTVVVEAEYRSG 301 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SLVTAR A GR +PGP + S G H L++ LVT+ +E++E + P Sbjct: 302 SLVTARQAQRLGRFAMGVPGPATSGLSAGVHELLRGEGSLVTDADEVVELVGDIGDLPPV 361 Query: 293 APENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 V +L + V +A AG E + +L EL G++ Sbjct: 362 RRGPVLPRDHLDAVTA---RVLDALPYHGVAHPRDLARTAGTSADETLGRLYELHSLGFV 418 Query: 352 AAVPGGYVRLRRACH 366 + Sbjct: 419 EREGDDWRLTPPPAR 433 >UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD6_WEIPA Length = 288 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 99/286 (34%), Positives = 146/286 (51%), Gaps = 5/286 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTL-RQAQR-FLSFPR 57 M + L L+ I L RI ++ ++ + + QQ ++ RQ+QR ++ Sbjct: 1 MAQRDFLLWLLMIPGLSIKGRYRIWIYLK-ENKLSKLSWQQILTISKMRQSQRNEATYWF 59 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K + + W + + I YP L D P LF +G+L L +A+VGSR Sbjct: 60 KEMNWQVEWHKLQDQTYIAICDAAYPITLSECIDAPICLFYKGDLSLLVQPLVAIVGSRQ 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + + L G+T SGLA GID + H+ L+ NG +IA++G G + +P+ Sbjct: 120 ATAYGISVLKSWIPGLTAAGLTTVSGLAAGIDELTHRETLKANGQTIAIIGTGFDYAYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L ++ Q G L+SE+ P ++FP RNRIISGL + LV+EA RSGSL+TA Sbjct: 180 HCEDLQNTI-SQLGLLLSEYLPWQGPKRHHFPERNRIISGLCQVCLVIEAKKRSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ R V ALPG I S G + LI GA V ++I+ Sbjct: 239 MLALEQNRTVMALPGRIDGQYSVGTNELILAGATPVLSVDQIVLEF 284 >UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58578 Length = 390 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 18/374 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS--IESSLC 65 L + + + +V + + A + G + R + R+S E L Sbjct: 17 LARAYLLGVAEPPAPHLLEFVGVRGPVAAAERVRAGDCPEKVLRETAARRESTIAEQDLE 76 Query: 66 WLEQPNHHLIPADSEFYPPQ-LLATT----------DYPGALFVEGE--LHALHSFQLAV 112 + L+ + +P LL+ P L+V GE L + +AV Sbjct: 77 AAAKVGARLVVPEDHEWPAWPLLSLAVASGNGVKNVAAPLGLWVRGEASLAEVADRAVAV 136 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG LATR V + SG A GID AH+ AL GV++A+LG ++ Sbjct: 137 VGARMATEYGLHNALEIGHALATRQVPVFSGAALGIDAAAHRGALSGGGVTVALLGCAVD 196 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P ++ L ++ +GGA+VSE+ PP + F RNR+I+GL+ G +VVEA +RSG Sbjct: 197 YSYPVGNSGLLDRIVAEGGAIVSEYAPKTPPARHRFLVRNRLIAGLTDGTVVVEAGIRSG 256 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLP 291 + TA A G+ V ALPG + + S G H LI+ A LVT +E+LE + P Sbjct: 257 ARNTATIAGALGKVVMALPGSVHSGSSAGCHALIRDCKATLVTSVDEVLETVGRFGTAAP 316 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 A N + + A + L + + VAE AG PV V L LE+ G+ Sbjct: 317 SAEPNRRPTDNLGPEASRVYDAL--LPRAGRAPEEVAESAGVPVSRVRALLPALEVDGFA 374 Query: 352 AAVPGGYVRLRRAC 365 G+ ++ R Sbjct: 375 VRGETGWRQIVRTA 388 >UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC Length = 298 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 158/295 (53%), Gaps = 19/295 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIA-----------HWVAKQSHIDAVVLQQTGLTLRQAQR 51 DT+ L L + L + R+ + ++I + + R ++ Sbjct: 6 DTQRLLALHYVYPLPLQKLQRLLSPVNVLNTFEEAHYGEIANILQISAHKALQISRSFRQ 65 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQL 110 ++ P + + N IP ++P QL + P L+V+G + Q+ Sbjct: 66 IMTIPFE------EAYTRANIFPIPFYHPYFPAQLFEISSPPTVLYVKGRYSLLTNKKQI 119 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A++GSR + Y +R L L G T+ SGLARG D +AH+A + + G ++AVLG+G Sbjct: 120 AIIGSRKATAYSKRALDLIVPPLVQCGYTVVSGLARGADTMAHRATIDMGGHTMAVLGHG 179 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 N ++PR + LA + +Q L++E+P + P ++FP RNRIISGL++ ++V EAA++ Sbjct: 180 FNYLYPRENQVLAMDMADQQ-LLITEYPPYMKPEKWHFPMRNRIISGLAQALVVTEAAIK 238 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 SG+L+TA ALEQG+++F +PGPI S+G + L+ +GAI V +I+E L Sbjct: 239 SGTLITAELALEQGKDIFVVPGPIDAAQSKGTNQLLVEGAIPVMNGHQIVETLDL 293 >UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus salivarius RepID=Q1WU06_LACS1 Length = 286 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 152/288 (52%), Gaps = 5/288 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSFPRK 58 M + +R S YG + +A+++ + + + ++ L+ ++ +++++ Sbjct: 1 MELRDFLIRAHICSQYYGGSVKNVAYFMNEIQKLPTEEEFIKLLKLSEKKIGKYMAYFLS 60 Query: 59 S-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + + E YP L + P F G L++ LA+VG+R Sbjct: 61 DGLTKEVEENKNYG-GICTIFDEDYPVLLKEIYNPPLVFFYNGNFSLLNAPTLAIVGARK 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 HS Y + + + G+ SGLA+GID + HK L G +I V+G GL+ +PR Sbjct: 120 HSPYAKEVLKKLLPDILDEGIATVSGLAKGIDSLTHKITLSEKGKTIGVIGTGLDRTYPR 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L A++ E+ G ++SE+ L PL ++FP RNRIISGL + +LVVEA +SGSL+TA Sbjct: 180 ENFELQANM-EKEGIVLSEYALGQKPLRFHFPARNRIISGLCQSLLVVEARRQSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 AL++ R V A+PG I + SEG + LI +GA + E+ILE + Sbjct: 239 NMALQENRNVLAVPGNINSILSEGCNELILEGAKPILRAEDILEEFKI 286 >UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mulieris RepID=C2KRF3_9ACTO Length = 462 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 98/433 (22%), Positives = 165/433 (38%), Gaps = 74/433 (17%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV--------------------VLQQTG 43 +++ + + ++ + Sbjct: 31 RWARAAWTALADPGDVTAGNLVEFFGALEALERLMRLATHEVEPDEDAIRDTFKPFVLPA 90 Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGEL 102 + A L + S++ L WL + + + +P L + P AL+V G+ Sbjct: 91 SVAKIAGWALRWRVVSVDQELEWLWENDGSFLIPGDPQWPRTLDTMGANRPLALWVRGDP 150 Query: 103 HALHSFQ---LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 A+ + +A+VGSR+ + YG LA GV + SG A GID H+ AL Sbjct: 151 AAVQDTETGAVALVGSRSATRYGMSMAGELGYDLAQHGVWVISGGAYGIDAAGHRGALGS 210 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 +G ++ V GL ++P + + +LE GA++SE P P + F RNR+IS LS Sbjct: 211 SGKTLCVQAGGLRELYPAMNTSMFDQILET-GAIISEQPWSYRPQRHLFLSRNRLISALS 269 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 + V+VVEA RSG++ TA EQGR V A+PG + + S G H LI++GA LVT ++ Sbjct: 270 QVVVVVEAGTRSGAMSTANHGAEQGRTVAAVPGLVTSGASAGCHQLIREGATLVTCAGDV 329 Query: 280 LENLQFGLHWL------------------------------------------------P 291 LE +Q + Sbjct: 330 LELMQPFVAPDEKPIGACSTAGSLGEGAGHSAENVTLSTAAAKESSEAGHSAPAAGSNAN 389 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVT-PVDVVAERAGQPVPEVVTQLLELELAGW 350 + + S S + ++ + + + +A++AG + + +L L L G Sbjct: 390 PSTKLSADSLFSPFLKPETIKVFDALPKRMWGSPENIAQKAGLGISATLGELGLLVLDGK 449 Query: 351 IAAVPGGYVRLRR 363 G Y R + Sbjct: 450 AETRDGKYRRPQP 462 >UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE20_THEAB Length = 266 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 139/241 (57%), Gaps = 12/241 (4%) Query: 44 LTLRQAQRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + + QR +K IES L WLE + ++ + Y L P LF +G + Sbjct: 24 IKSKDIQR-----KKFIESKLTRWLEFSGNGILTFFDDEYHEYLKNIWKPPVVLFYKGNI 78 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 H L +VVG+R+ + YG+ F + L+ I SG+A GID AHK + Q Sbjct: 79 HLLKKNCFSVVGTRSMTAYGKSITEKFVKKLSDF-FVIVSGMAIGIDTEAHKNSKQ---- 133 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IAVLG G++ +P+++ + + + G L+SE+ P + FP RNRII+G+S+GV Sbjct: 134 TIAVLGCGVDICYPKQNKYIYDKI-SKEGCLISEYLPWENPKKHYFPLRNRIIAGISEGV 192 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVE +SG+++TA A++ G+++F +PG I + SEGP++LIK GA VT+P+EIL+ Sbjct: 193 LVVECKKKSGTMITANYAIDFGKDLFTVPGNIFSLNSEGPNFLIKNGAYPVTDPDEILDF 252 Query: 283 L 283 Sbjct: 253 Y 253 >UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacterineae RepID=D0LAN6_GORB4 Length = 374 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 20/371 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF--LSFPRKSIE 61 W L ++ ++ + + AV ++ R+ + Sbjct: 7 RRAWAYLARVAEPPAAPVIDMIAALGVSEAAAAVRRRKVPDEHREVLAITASRADTDQAQ 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPP-QLLATTDY--------PGALFVEG--ELHALHSFQL 110 + L E+ L+ + +P L+A P AL+V G L + + + Sbjct: 67 ADLDTAERIGARLVTPADDEWPAWSLMALGQADTAARGGVPLALWVRGPARLDDIAAACV 126 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VGSRA S YGE L G + SG A GIDG AH+AAL G + AV+ G Sbjct: 127 ALVGSRAASSYGEHVTATVASGLCDNGFAVLSGGAFGIDGAAHRAALGSGGTTAAVMACG 186 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P HA+L + + GA++SE+P + F RNR+++ L +VVEA R Sbjct: 187 IDRDYPAAHAQLLREI-ARVGAVISEYPPGTTAAKHRFLTRNRLVAALGGATVVVEAGRR 245 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 SG+ TA A + GR + A+PGP+ + S G H +I A LV + ++ ++ Sbjct: 246 SGAANTAAWARKLGRPLGAVPGPVTSVTSVGCHQMIADQLATLVVDAAAVIRLVRPDGEG 305 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + ++ + + + +A AG +P V T L LE+ Sbjct: 306 ----VMTGGRARATDALSAEQKRVHDALPARGAVTIGEIAFSAGLELPAVRTALARLEVT 361 Query: 349 GWIAAVPGGYV 359 G I + Sbjct: 362 GLIDGDGARWW 372 >UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY7_9BACI Length = 308 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 148/301 (49%), Gaps = 13/301 (4%) Query: 4 TEIWLRLMSISSLYGDDMVR--------IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 E + L S + + + + + +S V ++ L + Q Sbjct: 8 RERLIHLHYCSGGDSEFVCKVLVKDPELLLMYGWSESEWLRVFPKRRSLAPQVFQGLSKR 67 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVG 114 P I SSL + +I + + YP L D P L+ +G + + LA+VG Sbjct: 68 PYHLIASSL---SEKGIQVITVEDDAYPKLLKEIYDPPLCLYTKGNVAYLTMASYLAIVG 124 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S Y + L G+ I SG+A G+D AH+ A+ + +IAVL G + + Sbjct: 125 TRWPSGYASQAIDFLMAPLKESGIVIVSGMAEGVDTQAHRKAMSLGLPTIAVLAFGFDHL 184 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P ++ L A L+ +V+EFP + ++FP+RNR+ISGL + VL+ EA RSGSL Sbjct: 185 YPAKNRDLYAR-LQTDELVVTEFPPYMKAEKWHFPKRNRLISGLCQAVLITEAKKRSGSL 243 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA CA+ Q R+VF++PG I NP SEG + LI+QGA L+ E++L + Sbjct: 244 ITADCAMSQNRDVFSIPGRIDNPVSEGTNRLIQQGAKLILTGEDLLNEFPESESAGKKSK 303 Query: 295 E 295 E Sbjct: 304 E 304 >UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU Length = 297 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 13/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + L + I+ L + + W + +T Q + + + I Sbjct: 1 MDQAAVCLTICRINQLLSPSL--LLKWWKADPSMSLTSPVLQTVTRDQIKA--AALKNEI 56 Query: 61 ES-------SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 E L + + IP S+ YP L + D P LF +G++ L ++ + Sbjct: 57 EQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGI 116 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG++ + + +G I SGLA GIDG++H A+++ G +I V+ G Sbjct: 117 VGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQ 176 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+PR + +LA + + L+SE P + P ++FP RNRIISGLS+GV+VV+ +SG Sbjct: 177 HIYPRENLQLADHMAKHH-ILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSG 235 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 SL+TA ALEQGREVFA+PG + +P + GP LI+QGA + E+I E L Sbjct: 236 SLITAYQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELP 287 >UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Rothia mucilaginosa RepID=D2NTN3_9MICC Length = 613 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 15/328 (4%) Query: 51 RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEGE----LHAL 105 R+ +++ + L+ +PPQL P L+ G+ L Sbjct: 284 RWNRRMERTLNAEAHMAATCGAWLVTPADPLWPPQLNDLGPARPYGLWCRGDSRHLLDVA 343 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG---V 162 + +A+VGSR S YG LA RG T+ SG A GID AH+AAL Sbjct: 344 SAPSVALVGSRDPSIYGTEATTHLAAELARRGYTVISGGAMGIDIAAHRAALTQQSSDLP 403 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IA + GL+ ++P +++ ++++ G ++SE + P + F RNR+I+ L++ Sbjct: 404 TIAFMAGGLDRLYPAQNSDALNMIVDR-GLIMSEVSVGNTPTRWRFLERNRLIAALARHT 462 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 +VVEA RSG+L TAR A+E GR ++A+PG I +P S G + L++ G A +TE +ILE Sbjct: 463 IVVEARWRSGALNTARHAMEIGRTLWAVPGQINSPNSVGTNRLLRDGLAQTLTEAADILE 522 Query: 282 NLQFGLHWLPDAPENS----FYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVP 336 L E+ S ++ + ++ VD +A G Sbjct: 523 YDAAAGFELGTEHESEWDQAASSSALDELTERQGRVWDDLSPRSYRGVDEIAAALGLSAR 582 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLRRA 364 +V+ L L G + + ++R A Sbjct: 583 DVMADLFHLGRCGLAESSGTSWRKVRPA 610 >UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03S82_LACBA Length = 296 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 9/287 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-------QQTGLTLRQAQRFLSFP 56 + +LRL ++ + HW+ + I A+ Q+ ++ + Q Sbjct: 6 RDFFLRLPLLTGVGQQTRRACWHWLTEHPTITALTPADLNRLCQEAAISADRTQLLQQVF 65 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + ++ + YP QL T P L+ G+L L QLAVVGSR Sbjct: 66 TSQLAKRVTENQRH-TGCLTIVDAAYPEQLRETYAPPVVLYYLGDLRWLTGPQLAVVGSR 124 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y R R + + V + SGLA+G+D +AH+AAL G +IAV+G GL+ +P Sbjct: 125 QPSPYALRAMRRLLPQVVRQQVCLVSGLAQGVDTLAHQAALAHRGKTIAVIGTGLDHCYP 184 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L L ++SE+P ++FP RNRII+GLS+ LVVEAA SGSL+T Sbjct: 185 AGNRDLMTE-LAHHHLVISEYPWGTAGARHHFPERNRIIAGLSQSTLVVEAARHSGSLIT 243 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL++ R V A+PG + NP S G + LI GA + E I+E + Sbjct: 244 ANIALQENRNVLAVPGSLDNPNSVGTNELILAGAKPILNSEHIIEEV 290 >UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH10_9ACTN Length = 434 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 106/395 (26%), Positives = 163/395 (41%), Gaps = 39/395 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-----------DAVVLQQTGLTL---- 46 + ++ R + + A L G + Sbjct: 32 ENRFARATWSGLAEPGDRLAGRAIQQLGSARSLTAVVEHWDAEQFATELSADGDPVSGDD 91 Query: 47 --RQAQRFLSFPRKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGEL 102 + R++ + +L + L+ D +P +L P AL+V G Sbjct: 92 MRQAIDRWMPRLKSDTALIALRQAARFGSRLLIPDDSLWPERLHDLDWHAPSALWVRGTD 151 Query: 103 HALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 AL +A+VG+RA + YGE L RG TI SG A GIDG+AH+AAL + Sbjct: 152 AALAGIVDGIALVGARAATGYGEHITMEASAGLVDRGYTIVSGAAYGIDGMAHRAALASH 211 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G+++A L G++ +P H L + ++E GA++SE P PP + F +RNR+I+ S Sbjct: 212 GLTVAFLAGGVDRFYPSGHDSLLSRIVE-NGAVISELPCGSPPTKWRFLQRNRLIAAASI 270 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEI 279 +V+EA RSGSL TA A GR + A+PGP+ + S G H LI+ A+ VT P+++ Sbjct: 271 ATIVLEAGWRSGSLNTAGHAAALGRPLGAVPGPVTSAASAGCHRLIRDYDAVCVTNPDQM 330 Query: 280 LENLQFGLHWLPDAPENSFYSPDQ---------------QDVALPFPELLANVG-DEVTP 323 E DA + S + LL + Sbjct: 331 AELAPLDRAPETDATMTTPESQPPTNLPPESSAPKVDADSPPSTETTRLLDALSVRSART 390 Query: 324 VDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D +A R+G + V L LEL G + G+ Sbjct: 391 ADDIASRSGLALATVRAHLGLLELDGRVVESERGW 425 >UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B990 Length = 252 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 137/258 (53%), Gaps = 18/258 (6%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 + + I + ++ + + + S+ YP Sbjct: 13 LKYKGQFDLIYKALERKERVDESLKEELFKTIKS--------------SYTTIISDDYPQ 58 Query: 85 QLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 QL P L+ G L L +AV+G R S YG + R+ + L + I SG+ Sbjct: 59 QLKYINCPPFVLYYYGSLSLLDKDCIAVIGKRDCSEYGVQATRVLVKELVKNDIVIVSGM 118 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 A+GIDGV+H+ A++ G ++AVLG+G++ +P + L + + ++SE+P PP Sbjct: 119 AKGIDGVSHRTAIRSKGHTVAVLGSGIDYPYPPMNEDLY--YVLKNELVLSEYPGSTPPR 176 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 +FP+RNRII+GLS+ +LV EA L+SG+++T ALEQG++VFA+PG + + S+G + Sbjct: 177 KDHFPKRNRIIAGLSQKLLVTEADLKSGTMITVGFALEQGKDVFAVPGRVYD--SKGCNA 234 Query: 265 LIKQGAILVTEPEEILEN 282 LI+QGA LV E+ILE Sbjct: 235 LIQQGAKLVMNVEDILEE 252 >UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=B1C1T5_9FIRM Length = 251 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 3/251 (1%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 I L+ G + Q + + ++ S+ YP L Sbjct: 4 EIILYFALKYAGDFDKIYQALERKEKIDDDLKGHLFKELKSKYTTIISDDYPAALKEINC 63 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF G+L+ +++ + V+G R S YG + L TI SG+A GID + Sbjct: 64 PPFVLFYYGDLNLVNTKCIGVIGMRQPSDYGIEVTKTIVSKLVLENYTIVSGMALGIDAM 123 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AH++A+ V G +IAVLG+G++ +P ++ + +++ ++SE+P ++ P NFPRR Sbjct: 124 AHQSAMNVLGKTIAVLGSGIDNCYPLKNKTIYE-IMKVNQLVISEYPGNLVPKKINFPRR 182 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NRIISGLS+ +LV EA RSG+++T ALEQG++++ +P I + S G + LI+QGA Sbjct: 183 NRIISGLSESILVTEANERSGTMITVGHALEQGKDIYCIPSRIND--SSGCNRLIQQGAK 240 Query: 272 LVTEPEEILEN 282 LV + +I+++ Sbjct: 241 LVMDISDIVDD 251 >UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E8F Length = 322 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 8/292 (2%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL----TLRQAQRFLSF 55 M +++ + L + L + + S + + T + + Sbjct: 1 MEESKRNLILLHHSNELSWKGIGLLLKSDPYLSQLKTYSPEDLQSILQTTPQHIRSIYDH 60 Query: 56 PRKSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVV 113 ES L + + + YP L + P L+ +G ++ LH + LA+V Sbjct: 61 IHHFPLESFLEKYKAYSIQISTLYDSSYPSLLRSCHKAPWVLYGKGNMNLLHTAKSLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG + L + I SGLA GID H+ L G +IAVLGNG+ Sbjct: 121 GSRKGNDYGYEVVNSWVPHLIKQDFVIVSGLASGIDSFVHERTLNYEGSTIAVLGNGILQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P +++ + + E+ G L+SE+P P + FP RNRIISG+++G LVV+A+ RSGS Sbjct: 181 CYPLKNSEIQKRIGEK-GLLLSEYPPFRKPERWQFPERNRIISGITRGTLVVQASKRSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 +TA ALE+GREVFA+PG I +P S G + LI+ GA LV E+I+E ++ Sbjct: 240 FITAERALEEGREVFAVPGNIFSPLSAGTNSLIQLGAKLVLSTEDIIEEIRL 291 >UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma whipplei RepID=Q83MV3_TROWT Length = 399 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 92/379 (24%), Positives = 154/379 (40%), Gaps = 33/379 (8%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI------DAVVLQQTGLTLRQAQRFLSFP 56 D IS R+ + + ++ +Q ++ S Sbjct: 35 DYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVW 94 Query: 57 RKSIE-----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA---LHSF 108 + + S L+ D + P L+V G + S Sbjct: 95 KMRADYQQLLKSFQAAHHTGAKLVVTDKYN-----KLQDEKPHILWVRGNSPSILLDTSQ 149 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 ++++VG+R S+YG+ +LA + I SG A GIDG AH +AL +I Sbjct: 150 KVSIVGTRCCSYYGKSVTADISYSLARKNYVIVSGGALGIDGTAHMSALSAGKSTIVFFA 209 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ I+PR + L + + E G +VSE P P + F RRNR+I+ + V+V EAA Sbjct: 210 GGVDWIYPRGNEALFSKICES-GIIVSEMPCGSRPTKWRFLRRNRLIAAIPSAVVVTEAA 268 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGL 287 RSGS+ TA A + V A+PGPI +P SEG + LI+ A VT ++++ + Sbjct: 269 ARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLV 328 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELE 346 S D + ++ + + + + +G +V + + LE Sbjct: 329 --------VSPIQKDSFGLQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLE 380 Query: 347 LAGWIAAVPGGYV---RLR 362 L+G + G+ RLR Sbjct: 381 LSGQVIRSGSGWRLSGRLR 399 >UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E954_9LACO Length = 294 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 6/292 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E ++L + + + IA ++ + I + + + + +K+ Sbjct: 1 MNKREFLIKLS-VMGVPYSIQLSIAEFIERNDRIPSFSETDRFIEGKSFE-LERIFQKAF 58 Query: 61 ESSLCWLEQPNH---HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 S + + N + YP L P L+ +G+ + L VVGSR Sbjct: 59 SSEVERAYRKNVEYAGVATIIDRNYPKALKEIYHPPVVLYFQGDFELANEPALGVVGSRV 118 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 HS Y E +L + +G+ I SGLA+G D + H+ + G +IAV+G GL+ ++PR Sbjct: 119 HSPYAEDSLKLLLPDVINQGIVIVSGLAKGTDSIVHQMTMNYCGKTIAVIGTGLDVVYPR 178 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + + G L++E+PL PL ++FP+RNRII+GL + +LVVEA RSG+L+TA Sbjct: 179 GNVMLQNEVAAK-GLLLTEYPLGSQPLKFHFPQRNRIIAGLVQTILVVEARHRSGTLITA 237 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 AL++ R V A+PG I S+G + LI GA E+I+E L Sbjct: 238 NVALQENRNVLAIPGKITESLSQGTNELIAAGAKPALCSEDIIEEFSNFLTN 289 >UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE2_9ACTO Length = 386 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 20/380 (5%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAK--QSHIDAVVLQQTGLTLRQAQRF---- 52 M DTE+W +++ + + L L + R Sbjct: 1 MNDTELWEAAWWSAVAEPADPCARILRQALGDRDARAWLIGSWSAPPLALARHSRIDWHT 60 Query: 53 ------LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHAL 105 I+S L + + +P L + P L+ GEL Sbjct: 61 QWNRWRQRALSVDIDSELTRVAHAGGGFMTPGDPRWPEHLACLGEEEPMGLWFLGELVEA 120 Query: 106 HS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L++VG+RA + G R R +A GVT+ SG A GID AH+ AL G + Sbjct: 121 PRVDRHLSIVGARASTGAGNRCARNMAAFVAAAGVTVVSGGAIGIDIEAHRGALSARGRT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I +L G+ +P H ++++ GGAL+SE P + F RNR+I+ S + Sbjct: 181 ICILAGGVCNPYPACHGGDFRAVIDGGGALISEVAPTARPAKWRFLTRNRLIAAWSGATV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA RSG+L TAR A+E GRE+ A+PG + P S G L + GA ++ + + LE + Sbjct: 241 VVEAGARSGALATARRAMEYGRELGAVPGAVDAPMSVGCLELARNGATIIRDGRDALELV 300 Query: 284 QFGLHWLPDAPENSFYSPDQ--QDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVT 340 + D + + + V+ + A EV Sbjct: 301 RPVSVDAAQPLFGMPVDDDHGVDALEPTQRRVWEALPRSAPASVEAICVAAALSREEVNY 360 Query: 341 QLLELELAGWIAAVPGGYVR 360 L+EL +AG +A G+ R Sbjct: 361 ALMELSVAGLVAGSTRGWTR 380 >UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6D8_THEAS Length = 361 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 152/351 (43%), Gaps = 21/351 (5%) Query: 18 GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIP 76 M R+ V + G R R L ++ Sbjct: 27 WARMGRLPREVISGPAALE----EAGFPRGGWSRVEEAMRTGWARRELDRASSMGIGVLA 82 Query: 77 ADSEFYPPQLLATTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 E YP LL +D P AL+V G + ++VVG+R S YG + E A Sbjct: 83 LGEEGYPESLLELSDPPAALYVRGTRGIPLRPQGAVSVVGTRRASTYGLKVAMAVGERCA 142 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + SG A GIDG AH+ AL G++ AVLGNG++ + P H L L+ + G LV Sbjct: 143 GSSLWTVSGGAMGIDGAAHQGALSKGGLTCAVLGNGVDVVFPADHRELFE-LVARDGCLV 201 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE+PL + FP RNRII+ LS ++VVEA RSG+L+TA AL+ GREV+A+PG I Sbjct: 202 SEYPLGTKGSQWRFPMRNRIIAALSARLVVVEAPERSGALITASRALDLGREVWAVPGKI 261 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 G G + LI GA+ + + L L E+ S + +++ Sbjct: 262 GEAQCRGSNLLIYDGAMPLVD-----------LDLLFPPGEDRGSSRQVDPLEGAILQVM 310 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 A + VD +A +++++L LE G + G L Sbjct: 311 A--SEGDWTVDKLALECKIGAADLLSRLAILEARGLVYRSSPGRYSLSPGA 359 >UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB3 Length = 366 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 105/359 (29%), Positives = 147/359 (40%), Gaps = 25/359 (6%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQTGL----TLRQAQRFLSFPRKSIESSL---------C 65 IA A + R+ I Sbjct: 13 RRAWLIARLSGHIERAWAARRPLPAVLSLADDELIAALAGEQRRRIAREYDRFDAALARE 72 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVVGSRAHSWY 121 I + YP +L D P L + G +A+VG+R + Y Sbjct: 73 RCVDCGLTAICRCAPHYPQRLRDLPDAPAVLHLLGRADRFEQLIEADGVAIVGARRATPY 132 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R LA G+T+ SG+A GID AH AL+ +G ++AVL G +P R Sbjct: 133 GIEQARGIARGLAAAGITVVSGMALGIDAAAHTGALEASGSTLAVLAGGAERAYPASKRR 192 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +VSE P P + FP RNR I+ L++ +VVEA RSGSL+TA AL Sbjct: 193 LHERIAAS-GVVVSEMPPGTPIRRWAFPARNRTIAALARLTVVVEAGERSGSLITATLAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + P + G + LI +GA L+ P+++LE L P P N+ S Sbjct: 252 DLGRDVAAVPGLVTAPLAAGTNGLIAEGARLIRGPQDVLELL--FGADAPRVPGNAVASG 309 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 D+ LL VG V + G PV + L +LEL G + GG Sbjct: 310 LPADL----RALLERVGSGQDTVAALTAD-GLPVDAALAGLAQLELRGKVRRTTGGRYA 363 >UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermophilus RepID=Q72GH5_THET2 Length = 334 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 159/353 (45%), Gaps = 26/353 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + ++ + + + R L E Sbjct: 4 LALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAW--------RHLPEAEAQAERERRRA 55 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E L+ E +P L A P L+++GEL +A+VG+R S + + R Sbjct: 56 EALGVRLLGLWEEGFPEGLKALPQPPTHLYLKGELP-PEREAVALVGTRRASPWALAFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L+ G+ + SGLARGID AH AL+ G ++ VLG+ L+ ++P + LA + Sbjct: 115 KLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDRVYPPENRPLAQRMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFP P FPRRNR+I+GL + V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + S G + LI+ GA V E++L L S ++ Sbjct: 230 LAVPGRPMDERSLGANRLIQDGAYPVLSAEDVLSYLG-----------MSARPKPLPGLS 278 Query: 308 LPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L A + + + + +A G P V++ L LEL G A+PGG Sbjct: 279 PEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELKGLARALPGGRY 331 >UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG86_CORU7 Length = 416 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 99/405 (24%), Positives = 152/405 (37%), Gaps = 46/405 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIA-------------HWVAKQSHIDAVVLQQTGLTLRQ 48 + W+ L D++ + + A+ + Sbjct: 11 QNLLAWIYLRQTIEASNTDILNLLWPEGWENRLEGRDAGKGALPDVRALASRIRHRDPSL 70 Query: 49 AQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLA---------------- 88 R L E+ L LI + +P L Sbjct: 71 PHRILESTAARVDCDPEAELDAATAAGFRLITPLDQEWPETLDHAFARIDDRGSDQNSAV 130 Query: 89 --TTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 P AL++ G L L + VVG+R + YG + LA G +I SG Sbjct: 131 RGLAAAPFALWLRGNGNLRNLSRQSVTVVGTRQPNAYGAQLSTQLSTDLALAGYSIVSGG 190 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 ARG+D AH AAL+ G SIAVL GL+ +PR+H L + E G +VSE+ L P Sbjct: 191 ARGVDRCAHTAALRAGGASIAVLACGLDVDYPRQHVGLFKQIAES-GVVVSEYALGTHPA 249 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 + F RNR+++GLS G +V +AA RSG+L T A + +PGP+ S+G Sbjct: 250 RHRFLTRNRLVAGLSAGTIVTQAANRSGALNTLNWAEVMLNQPMVVPGPVDTALSQGVLH 309 Query: 265 LIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYS----PDQQDVALPFPELLANVGD 319 ++ G A V + E ++ + PE Q ++L + G Sbjct: 310 RLRDGRAQPVWTAGHVRELVEASSQFNAQVPEQQAMVFGSGTGVQSMSLNQVTVYDAAGL 369 Query: 320 EVTPVD---VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 V + G + V+ L ELE G ++ +VR+ Sbjct: 370 PGGGGPTLRDVQQETGLSIQLVMRTLKELESQGLVSREGERWVRV 414 >UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=Mycobacterium RepID=Y2896_MYCTU Length = 389 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 159/371 (42%), Gaps = 19/371 (5%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W L ++ + + V D V Q G L Sbjct: 8 AWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVG-NELAQHTGARREIDRAADDLE 66 Query: 66 WLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEG--ELHALHSFQLAV 112 L + LI D + +P + P L+ G L + AV Sbjct: 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+RA + YGE LA R V++ SG A GIDG AH+AAL G+++AVL G + Sbjct: 127 VGTRAATAYGEHVAADLAAGLAERDVSVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P H+ L + Q G L +E+P V P + F RNR+++ +++ +VVEA LRSG Sbjct: 187 IPYPAGHSALLHRI-AQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSG 245 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 + TA A GR V A+PGP+ + S G H L++ GA LVT ++I+E + D Sbjct: 246 AANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGD 305 Query: 293 APENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 P ++ ++ + G +D +A +G +V+ L LE+AG Sbjct: 306 EPRPGA---ALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 Query: 352 AAVPGGYVRLR 362 G + LR Sbjct: 363 ECRDGRWRILR 373 >UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBV0_NAKMY Length = 423 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 148/401 (36%), Gaps = 42/401 (10%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR----- 57 + L+ +VR VL + + Sbjct: 15 ERVALAGLLRACEPPSAALVRYVQGHG-PEAAWQAVLARRAPRAVLSATAARVDGVDPAV 73 Query: 58 --KSIESSLCWLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEGE-LH 103 E+ L + LI + +P + + P AL+V G L Sbjct: 74 LVARAEADLVAAARVGARLIGPPDDQWPGAAVSAFAGAMARGVRGAGPPLALYVRGRPLT 133 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV---- 159 L + VVGSRA S YG R LA G + SG A GID AH++ALQV Sbjct: 134 GLPDRAVTVVGSRASSPYGTRVAGEMAYELARAGSVVVSGAAFGIDTAAHRSALQVVRSA 193 Query: 160 ----NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 V++AVL G++ +P + L + + G++VSE+P P + F RNR+I Sbjct: 194 PDEPRSVTVAVLACGIDRAYPEANRDLLDLI-ARHGSVVSEYPPGTVPARHRFLVRNRLI 252 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVT 274 + +VVEA RSG+L TA A + GR V A+PGP+ + S G H L+ A LVT Sbjct: 253 AAFGAATVVVEAGRRSGTLSTAAAAEQLGRMVMAVPGPVTSAMSVGCHLLLADRFAQLVT 312 Query: 275 EPEEILENLQ-----------FGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVT 322 +++L L A + + T Sbjct: 313 GADDVLTALGRTGRTGRLESRAVPGPHDGAVPGEDPRHPTDGLEPTNARVYDAFPTRGST 372 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 V + +G P V+ L L+L G + R+R Sbjct: 373 SVHELVVESGLPAATVMGALAVLQLHGLADQDGPQWRRVRP 413 >UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQY9_OCEIH Length = 294 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 97/284 (34%), Positives = 142/284 (50%), Gaps = 7/284 (2%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPRKSIESSL 64 L S+ + I Q + L++A+ F S Sbjct: 10 HLSRCRSITRSLLRNILQLDPSLKITYQSSANQLSSWLQIPLKKAEYFYSDLHNVALQKQ 69 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGE 123 + + + E+YPP L D P L+ G++ L L+V+G+R + + Sbjct: 70 VIRDMQLYQTVTIVDEYYPPMLNTIKDGPIVLYAIGDIDILKKLPSLSVIGTRKPTAQAQ 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R + L +G I SG+ARGID AH+ L NG +IAVLG G + I+PR H L Sbjct: 130 RKMEIILP-LIQQGWIIVSGMARGIDSFAHQMTLHHNGKTIAVLGGGFHHIYPREHLSLF 188 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + Q G +++E+P D PP+ + FP RNRIISGL+ G LV+EA RSG+L+T AL+Q Sbjct: 189 HEIT-QKGLVLTEYPPDQPPIRHQFPERNRIISGLTMGTLVIEAMKRSGTLITVDQALDQ 247 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 GREVFA+PG ++G H +I+ GA LV E +I+ + L Sbjct: 248 GREVFAVPGNPWVQQTKGCHQMIQDGAKLVQETNDIIIEFEGML 291 >UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3C0_JONDD Length = 395 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 97/350 (27%), Positives = 151/350 (43%), Gaps = 34/350 (9%) Query: 46 LRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELH 103 + AQR+ P E L HL+ +P QL P L+V G+ Sbjct: 39 AKWAQRWNARMPAVDNERDLRAARTLGAHLLTPSHPHWPRQLDDLAETSPWLLWVRGKSS 98 Query: 104 ALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 +++ +++VG+R S YG+ ++T + + SG A GID H+ +L+ N Sbjct: 99 MVNADASVSIVGTRTPSAYGDYVAHAILAGISTSKILVVSGGAYGIDAHVHRGSLEHNLP 158 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 S+AVL G++ ++P+ + +L L++ GALVSE P+ V P F RRNRII+GL Sbjct: 159 SVAVLAGGVDRLYPQGNKKLLQRLIDH-GALVSEMPVGVAPSRVRFLRRNRIIAGLGDVT 217 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 V+EAA RSGSL TA A GR V A+PGP+ + S G H LI +G A L+ P ++ Sbjct: 218 TVIEAAWRSGSLSTAHHAAGLGRAVMAVPGPVTSAQSAGCHRLIAEGYAALLGHPADLEA 277 Query: 282 NLQF----------------------------GLHWLPDAPENSFYSPDQQDVALPFPEL 313 + ++ +S + + + Sbjct: 278 IVNHRSSDRRERHADIGSDQRENSHAEPGVQRAGDMTGSHRQDDLFSRESDSLHEGERLV 337 Query: 314 LANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +D + +G EV L LEL + GY R+ Sbjct: 338 YDALSPFRARFIDDLVAASGLSHLEVREILGILELKQLVICEQQGYRRVA 387 >UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTX1_9CORY Length = 398 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 153/393 (38%), Gaps = 37/393 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRKSIE 61 E W L + ++ + I + + + Sbjct: 5 KLESWAYLNRVVEGPNRHLLAHLNAGRDADEIAHGIRTRASWLGELGPATESRYTWDRPA 64 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATT---------------------------DYPG 94 L Q + LI + +P P Sbjct: 65 EDLEEAAQHGYSLITPEHPEWPA--DEIAASFGSALSKQERGLGPAADEEPLPPEGYPPH 122 Query: 95 ALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 +L+ G L L + + +VG+RA S YG C LA TI SG A GID VA Sbjct: 123 SLWARGNTNLAQLFAQSVGIVGTRAASAYGHHATADLCTGLARHRYTIVSGGALGIDTVA 182 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 H+ AL +++ V G I+P+R+ +L + +GGA+V+E+P + P + F RN Sbjct: 183 HETALNNQALTVVVAACGPGQIYPKRNGKLFDRIAAEGGAIVTEYPPGMTPDRHRFLTRN 242 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAI 271 R+++ L++G +VVEAA RSG+L T + R A+PGPI PGS G + I+ A Sbjct: 243 RLVAALTQGSIVVEAAFRSGALNTLKWVKTYNRVPLAVPGPILGPGSLGTNLAIRNDRAD 302 Query: 272 LVTEPEEILENLQFGLHWLPD-APENSFYSPDQQDVALPFPELLANV---GDEVTPVDVV 327 +V ++ + L D E F + Q ++ + ++ G + V Sbjct: 303 MVLSADDAHQQLGAIGSTDADGQLEIDFEADAIQKLSRNELRVYDSLPVAGAGGIDAEAV 362 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 A+ +G + V L++L G + + R Sbjct: 363 AQASGFTIALAVHLLMDLHKKGLVVRKGKMWER 395 >UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomycetales RepID=A6W7V8_KINRD Length = 395 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 160/372 (43%), Gaps = 21/372 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D ++ + V + ++AV+ G + + Sbjct: 28 DDRLARAAWSRLAEPGDAAAAHLVAEVGAVTALEAVL---AGRGPDRWR--TRSREADPA 82 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTD---------YPGALFVEG--ELHALHSFQL 110 L L+ + +P +L P L+V G L + + Sbjct: 83 GDLAAARAAGGRLVVPGDDEWPGRLEDLDRDAGGERPLGAPFCLWVRGPAHLREVTARSA 142 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+RA + YG+ LA R + SG A GID AH+AAL V GVS+AVL G Sbjct: 143 ALVGARAATAYGQHVTSELAAGLADRRFAVVSGGAFGIDAAAHRAALAVGGVSVAVLACG 202 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P +A L A L E+ GALVSE P P + F RNR+I+ L+ G +VVEAA R Sbjct: 203 VDRSYPPGNAALLARLAER-GALVSEVPPGSTPTRWRFLERNRLIAALTSGTVVVEAAWR 261 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHW 289 SG+L TA A R V A+PGP+ +P S G H L+++ GA+ VT +E+ E L Sbjct: 262 SGALSTADRAERLLRPVGAVPGPVTSPASAGCHRLLRERGAVCVTSADEVAELLGELGRE 321 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELA 348 S + + + ++ + AG + V + L LEL+ Sbjct: 322 PAPVR--SVERRAFDGLDRDELRVAECLPRRGGCDLERLVLDAGLELAVVQSVLGRLELS 379 Query: 349 GWIAAVPGGYVR 360 G VPGG+ Sbjct: 380 GIAVRVPGGWRS 391 >UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides sp. JS614 RepID=A1SIY8_NOCSJ Length = 349 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 139/317 (43%), Gaps = 19/317 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS 59 D + L + + + + +A ++ AQ Sbjct: 12 DRLARVTLSRTIEPGDVRVTGLVSELGAGKVLGYLEAAGDVESHWGFALAQELGRV---D 68 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQL---------LATTDYPGALFVEG--ELHALHSF 108 L I +P QL P L+V G +L L Sbjct: 69 PAQVLEQAAARGIRFIVPGDAEWPTQLGALRNAGALHERGGEPVGLWVRGAHDLRQLAGN 128 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +AVVGSRA + YG LAT G T+ SGLA G+D AH+ AL G +IAVL Sbjct: 129 SVAVVGSRAATSYGAEQATELSRDLATMGHTVISGLAYGVDQAAHRGALIAGGPTIAVLP 188 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ +P HA+L ++ E+ G +VSE P P F RNR+++GLS+G +VVEAA Sbjct: 189 GGVDRPYPAAHAQLLEAIAER-GLVVSEAPPGAGPTRTRFLARNRVVAGLSEGTVVVEAA 247 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGL 287 LRSG+L TA R V +PGP+ + S G + L++ G A +VT ++++ +L Sbjct: 248 LRSGALNTAHWTTNLHRPVMGVPGPVSSAASTGVNQLVRLGQASMVTSAQDVITDLTTHA 307 Query: 288 HWLPDAPENSFYSPDQQ 304 + + + + D+ Sbjct: 308 NAAATSADGASGELDES 324 >UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ANQ5_TSUPA Length = 373 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 112/370 (30%), Positives = 163/370 (44%), Gaps = 27/370 (7%) Query: 21 MVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 ++ + V + +AV ++ G R E+ L +E L+ D Sbjct: 9 LIALIDAVGPDAAAEAVRRREFPAGFEDVAEATAARADRDRAEADLDHIEHLGGRLLTPD 68 Query: 79 SEFYPP-QLLAT----------------TDYPGALFVEG--ELHALHSFQLAVVGSRAHS 119 +P +L P AL++ G L L +A+VG+RA S Sbjct: 69 DGEWPEYRLAVLAARPRTPAQVHEDQWRELRPIALWMVGGGHLDDLLDRSVAMVGTRAPS 128 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YGER F LA G T+ SG A GIDGVAH+AAL G ++A + GL+ +P H Sbjct: 129 GYGERVADHFAGDLAAEGFTVVSGGAYGIDGVAHRAALAAGGPTVAFVAGGLDRPYPAGH 188 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A L + E GA++SE+P P + F +RNR++ ++ GV+V+EA LRSG+ TA Sbjct: 189 AGLFRRIAE-DGAVISEYPPGTVPAKHRFLQRNRMVGTVTGGVVVIEAGLRSGTRNTATW 247 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A + V A+PGP+ S H LI+ GA LVT P E++E + P E Sbjct: 248 AGHRDVPVCAVPGPVTVATSVTCHQLIRDGARLVTRPAEVIEEVGRIGELAP---EREVP 304 Query: 300 SPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +A + + PV +A AG P V+ L L+ G + G Sbjct: 305 VHRTDGLAAGELRVYDALPARSGLPVSEIASVAGLPARAVLGHLAMLDARGLVTKD-GAL 363 Query: 359 VRLRRACHVR 368 RLR R Sbjct: 364 WRLRSPTEDR 373 >UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides sp. JS614 RepID=A1SLR3_NOCSJ Length = 378 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 103/377 (27%), Positives = 153/377 (40%), Gaps = 17/377 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D + + L ++ ++ + + + ++L L Q + + Sbjct: 6 EDRLLRVALSALGEPGDPRLLDWVTRLG-PAAVHELLLTGHTLEELQTDPDARRAAEDPQ 64 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEGELHALHS-FQLA 111 +L + E +P QL P L+V G +A Sbjct: 65 RTLARAADRGLRFVVPGDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAGSVA 124 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVGSR+ + YG +A + SG A GID AH+ AL G ++AVL G Sbjct: 125 VVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGIDQAAHRGALVGGGSTVAVLACGA 184 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P H L + GA+VSE P F RNR+I+ LS G +VVEAA RS Sbjct: 185 DRCYPAAHRELIEYI-AGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAAARS 243 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 G+L TA A R V +PGP+ + SEG H LI+ Q A+LVT ++LE + L Sbjct: 244 GALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQHL 303 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDV-VAERAGQPVPEVVTQLLELELAG 349 E + + ++L V + +A AG + E L+ L G Sbjct: 304 A--AEPRGPVRSRDRLTTRQRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAERG 361 Query: 350 WIAAVPGGYVRLRRACH 366 VPGG+ RL H Sbjct: 362 LAEQVPGGW-RLAALAH 377 >UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Actinomycetales RepID=Q2J706_FRASC Length = 446 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 150/361 (41%), Gaps = 23/361 (6%) Query: 18 GDDMVR--IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLI 75 + + R +A + AV +++ G + P L + L+ Sbjct: 31 PERLARVALARVFGPEHRRVAVEVRRRGAFEVWNALRAAHPSVDPVRDLDAAWRAGARLV 90 Query: 76 PADSEFYPPQLLATTDY-----------PGALFVEG--ELHALHSFQLAVVGSRAHSWYG 122 +P +L A P AL+V G L L + VVG R + YG Sbjct: 91 CPQDAEWPLELDALDRLRDAGDGSMIGTPLALWVRGPLNLSELPPRAVTVVGCRTATSYG 150 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 +A +G + SG A GID AH+ AL G ++AVL G++ +P H L Sbjct: 151 LHLAGEIAFAMAEQGWAVVSGAAFGIDAAAHRGALAAAGPTVAVLAGGVDVPYPTAHVEL 210 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + + GA+VSE PP F RNRII+ LS+G ++VEA RSG+L T Sbjct: 211 LEEI-ARTGAVVSEVSPGTPPYRRRFLTRNRIIAALSRGTVLVEAGHRSGALNTVAHTRR 269 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ---GAILVTEPEEILENLQFGLHWLPDAPENSFY 299 GR V +PGP+ + S G H L++ +LVT E+I E + + Sbjct: 270 LGRPVMVVPGPVTSAMSAGCHRLLRDFREQTVLVTGAEDIREEIASIGSL---VQRPASG 326 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + ++ ELL + V V+A R G V+ L L + G + V GGY Sbjct: 327 NGPRDGLSEAVRELLDAMPARAAVGVSVLARRTGLRPEAVLAMLGPLAVEGLVENVAGGY 386 Query: 359 V 359 Sbjct: 387 R 387 >UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FJ6_PEDPA Length = 286 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 6/287 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQAQRFLSFPR 57 M + +R+ ++L +I + K + + ++ + + Sbjct: 1 MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQS 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGSR 116 + + + EQ ++ E YP L P LF G L H +A+VG+R Sbjct: 61 EQLTHEIQINEQSG-GILTILDEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGAR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YGE+ + + +T SGLA+G+D + H+A L G +IAV+GNGL+ +P Sbjct: 120 MMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATLANAGSTIAVIGNGLDITYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +++A+L + ++ G ++SE+P PL ++F RNRII+GL+ VVEA SGSL+T Sbjct: 180 KQNAQLQNQI-QKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL + R V A+PG I + S+G + LI GA + E +++LE + Sbjct: 239 ASLALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEV 285 >UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria RepID=B7ABZ5_THEAQ Length = 410 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 100/333 (30%), Positives = 154/333 (46%), Gaps = 25/333 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + ++ + A Q +R S E+ Sbjct: 4 LALAFLPGIGPKRLLELLGA-EDPKEALAERFPQL------LERL-SEAEARAEAERRRA 55 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E+ + ++ E +P L P L+++G L +A+VG+R + + + R Sbjct: 56 EELSLRILGLWEEGFPESLKRLPQPPTHLYLKGTLP-EEGQAVAIVGTRRAAPWALSFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 TLA G + SGLARGID AH AL+ G ++ VLG+ L+ I+P H +A + Sbjct: 115 KLARTLAEAGAVVVSGLARGIDREAHLGALEAGGRTLGVLGSALDQIYPPEHRPMAERMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFPL P +FPRRNR+I+GL++ V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPLGTGPKPEHFPRRNRLIAGLARAVIVVEAPLESGALITARYALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + GS G + LI+ GA V PE+ L L F + +++ Sbjct: 230 LAVPGRPTDQGSLGANRLIQDGAYPVLAPEDALAYLGFSG-----------RRKEVLELS 278 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + +AE G V++ Sbjct: 279 PEESRLYELLRQGEALPEHLAEALGMSPEGVIS 311 >UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKL0_ACIFE Length = 370 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 162/347 (46%), Gaps = 12/347 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-----IESSLCWLEQPNHHLIPAD 78 + ++ R S E W + +I Sbjct: 24 LREAFGSLEKAWKAGIKDLRAAGLLTPALEKVWRDSRKPALPEKIWDWCQVHGARIISRW 83 Query: 79 SEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGV 138 S YPP + P L+V+G L LA+VGSR + YG F A V Sbjct: 84 SPDYPPLVDQLGAPPPVLYVKGRLP-EQPACLAIVGSRKATDYGLAVAARFARAAALEKV 142 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 + SG A GID AH+AAL+ G+++AVLG GL ++PRRH RL + EQ GALV+E Sbjct: 143 PVISGGAYGIDAAAHRAALEAGGLTVAVLGGGLGELYPRRHLRLFDKICEQ-GALVTEQS 201 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 PPL NFP RNRII GLS+ VLVVEAA+RSG++ TA A ++ R+++A+PGPI + Sbjct: 202 PWTPPLPQNFPLRNRIIVGLSRSVLVVEAAIRSGAMSTAHAAADENRDLYAVPGPIDSET 261 Query: 259 SEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV- 317 S+G HWL+KQGA L +P E+L++L P +V+ E + Sbjct: 262 SQGTHWLLKQGARLGDDPRELLDSLLGREPGTCTGPAEEEEPDLFGEVSPEEQERAGALY 321 Query: 318 ----GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ +A P+ + T LLELEL G I Sbjct: 322 RWIKKHRAQSLEDLAGAFPWPLAVLSTLLLELELGGRIRRNSRNRYS 368 >UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIU8_PEDAC Length = 289 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 6/290 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRK 58 M + +R+ ++ +I V Q + T + Q +++ Sbjct: 1 MELRDFLIRIKIGTTFGIKKQSQIYQTVRDQPELSISEWVHTSPLIADEQRSDLVNYLHS 60 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVGSR 116 ++ + EQ ++ YP L P LF G L L + +A+VG+R Sbjct: 61 SKLKRKIHENEQNG-GILTIADPAYPDILREIYCPPTVLFYRGRLDLLQEPRMIAIVGAR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + L + SGLARG+D + H+A + G +IAV+GNGL+ +P Sbjct: 120 NMTRYGMATVKKLVPGLLEHQLVTVSGLARGVDAMTHQATVDGAGKTIAVIGNGLDVTYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +++A L ++Q G L+SE+ PL ++F RNRII+GL++ ++EA +SGSL+T Sbjct: 180 KQNAVLQDQ-VQQTGLLLSEYAQGARPLRHHFVERNRIIAGLAQATCIIEAKQKSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 A AL + R V A+PG I + S G + LI GA + ++LE + Sbjct: 239 ASLALGENRNVLAVPGSIFSENSRGTNELIAAGARPLISLNDVLEEVGLQ 288 >UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMF6_9CELL Length = 402 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 146/367 (39%), Gaps = 31/367 (8%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI------------------------DAV 37 + +++ + + D Sbjct: 16 DERAARAVWSALAEPGDAVAGALVQACGAAPALAWVADAVATPHPDWAVLETLGGGGDDA 75 Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGAL 96 + ++ GL + + +P E ++ L+ +P L P AL Sbjct: 76 LRRRVGLGVARWAA--RWPALDPERDRAAAQRCGARLVVPGDPAWPRGLDDLGVLTPFAL 133 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +V G LAVVG+RA + YGER LA RG + SG A GID AH+ A Sbjct: 134 WVRGAPPVAD-RTLAVVGARASTTYGERVTVDLAVELARRGWAVVSGGAYGIDAAAHRGA 192 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L GV+ VL G++ +P +ARL ++ GG+L SE P P F +RNR+I+ Sbjct: 193 LLGGGVTHVVLAGGVDRAYPAGNARLLEEVVRAGGSLFSEVPPGATPSRARFLQRNRLIA 252 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTE 275 ++ +VVEAA RSG+ TA A R V A+PGP+ + S G H L++ G A+ +T+ Sbjct: 253 ASAQATVVVEAAWRSGAASTAHHAARLLRPVGAVPGPVTSAASAGCHRLLRDGVAVCITD 312 Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQP 334 E +E L ++ + + + + V VVA RAG Sbjct: 313 AAEAIELAGDVGPDLAP-TPDAGVTRPTDGLDPLARLVHDGLARRTARDVTVVAARAGTT 371 Query: 335 VPEVVTQ 341 V + Sbjct: 372 VAQARAM 378 >UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propionibacterium acnes RepID=Q6A7T7_PROAC Length = 377 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 101/365 (27%), Positives = 153/365 (41%), Gaps = 27/365 (7%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE 80 R+ + +L +G R +R S ++ + E+ + E Sbjct: 23 AKRLVE--MTAEELWQHMLTDSG--ERWHKRAKSL---DVDQLVERSEKAAMRFLIPGDE 75 Query: 81 FYPPQLLATTDY--------PGALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 +P L + P L+V G L + +A+VG R+ S YG+ Sbjct: 76 EWPTGLDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVAVEMA 135 Query: 131 ETLATRGV------TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 L T+ SG A GID AH+ AL G +++VL GL+T++PR ++ + Sbjct: 136 YRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLACGLDTLYPRGNSAVLE 195 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + GALVSE PL P F RNR+I+ L+ G +VVEA RSG++ TA A G Sbjct: 196 QI-AGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWRSGAINTASWANALG 254 Query: 245 REVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 V A+PGP+ + S G + LI+ G AILV + +++ + S + Sbjct: 255 NAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPEPERPAGRSLPTDIL 314 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + L E L +D +A AG PV + L LE G A G + Sbjct: 315 DAIELAVHEALPA--HGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTWSVTL 372 Query: 364 ACHVR 368 A R Sbjct: 373 ARERR 377 >UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomycetales RepID=A8M692_SALAI Length = 452 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 96/383 (25%), Positives = 153/383 (39%), Gaps = 31/383 (8%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-- 59 D + L ++ + + + +L+ G + ++ + Sbjct: 37 TDRLARVALTWLTEPGNRSVFELVESHGAVDTL--ALLRDGGAPGETLRETVAARLSAGN 94 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTD---------------YPGALFVEG 100 ++ ++ L+ + +P + P +V G Sbjct: 95 PLAVAAQAMERADRLGARLVTPADDEWPLPVADLRRLVLTGSTRRVDRETAPPLCFWVRG 154 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 L +A+VG+RA + YG LA RG T+ SG A GID AH+ AL Sbjct: 155 GQPLAETLDRSVAMVGARAATEYGVHTSTELAYGLAERGWTVVSGGAFGIDAAAHRGALT 214 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 G++++VL GL+ +P +A L + + G LVSE+ PL F RNR+I+ Sbjct: 215 AGGLTVSVLACGLDRPYPMGNAALFDRIADT-GLLVSEWMPGADPLRPRFLIRNRVIAAA 273 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ--GAILVTEP 276 ++G ++VEAA RSG+ T AL R V +PGP+ + S G H L++Q A LV Sbjct: 274 TRGSVLVEAAARSGATQTMHRALAIARPVMVVPGPVTSVMSIGSHELLRQYPEARLVAST 333 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPV 335 +LE + L DQ D +L + VD VA R+G V Sbjct: 334 AHVLEEVGRIGVDLAPLVRGPTRVRDQLDDES--ATVLEALPRRGVRGVDDVAARSGVAV 391 Query: 336 PEVVTQLLELELAGWIAAVPGGY 358 + +L LE G + GY Sbjct: 392 RTALRKLALLEELGLVIQRDDGY 414 >UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcaceae RepID=C5CAH8_MICLC Length = 424 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 104/385 (27%), Positives = 158/385 (41%), Gaps = 33/385 (8%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSFPRKSI-- 60 L + ++++L + + + + +L L R A + ++ Sbjct: 40 LAVQTVTALGPERALVLLTGREAIQPAERDLLADLAGTPDTLPRRWAAGLARWAPRAARL 99 Query: 61 --ESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELH-ALHSFQLAVVGSR 116 E L L + L+ + + +P L + P L+ G LAVVGSR Sbjct: 100 EPERDLVTLHRLGGGLLIPEDDAWPAALADLGEEAPLGLWFRGTGTLPPADRMLAVVGSR 159 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG------------VSI 164 + YG +G + SG A GIDG AH+AALQ ++ Sbjct: 160 EATAYGRTVTARCAAHAVQQGACVISGGAYGIDGAAHRAALQAPAAPEDAAGRGGVPPTV 219 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVL GL+ +P H L +++ G LVSE P P Y F +RNR+I+ L+ VLV Sbjct: 220 AVLAGGLDRFYPAGHEDLLRAVMAA-GLLVSEMPPGASPTRYRFLQRNRVIAALAGAVLV 278 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL 283 VEA RSG+ TA A GREV +PGP+ +P S G H L+++ A LVT +E L L Sbjct: 279 VEARWRSGAQNTAGHAFGLGREVGVVPGPVTSPSSAGCHRLLQESPARLVTTEQEALALL 338 Query: 284 QFGLHWLPDA-------PENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPV 335 A + + + + + + P D + AG + Sbjct: 339 GQAPARSGGAGGRASTRAAPEPAARPTDGLTMEEALVHEALPLRQAVPADRITVSAGLAL 398 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 P V+ L L+ AG V + R Sbjct: 399 PTVLACLSRLQRAGLAERVEDRWRR 423 >UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ48_9RHOB Length = 372 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 5/270 (1%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 M + R+ S + + + P I + L + Sbjct: 1 MRSRRVGISTFYRLLSEHGTASAALVALPEIAAAAGVEGYEVC--PEPVITAELRDARKA 58 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 LI +E YPP L+ D P L+V G+ ALH + VVG+R S G R R Sbjct: 59 GARLICIGTEDYPPGLMDLADPPPMLWVIGQTSALHRPMIGVVGARNASSLGLRMARNLA 118 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ G + SGLARGID AH+A+ + ++AV+ G++ ++P +A LA ++ Sbjct: 119 AALSEAGYVVVSGLARGIDAAAHQASAETG--TVAVMAGGVDALYPPENATLADAIP-GT 175 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA +SE P+ P A +FPRRNRII L++ ++VVEAA +SGSL+TAR AL+QGREV A+ Sbjct: 176 GARLSEMPMGRQPQARHFPRRNRIIPALARALVVVEAAAKSGSLLTARAALDQGREVLAV 235 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 PG + + G + LI+ GAILV +++ Sbjct: 236 PGHPFDARAAGGNMLIRDGAILVRSARDVI 265 >UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKG0_9ACTN Length = 299 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 143/295 (48%), Gaps = 10/295 (3%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++ ++YP L P L+ G+ L + L+V+G+R + YG + Sbjct: 5 WILTRGDDYYPKCLEDLHSPPRVLYGIGDPTLLSAPMLSVIGARRATPYGIAIAEMTARV 64 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 GVT+ SG A G D A +AL G +I VLG G + I+PR L + EQ G Sbjct: 65 AVDCGVTVVSGGAMGCDFAAGMSALSAGGKTIVVLGCGADVIYPRSSEPLILAAQEQ-GV 123 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++S P PP + FPRRN II+ L ++V EA +RSG++ TA A++ GR ++A+PG Sbjct: 124 VLSLDPWKTPPRRFAFPRRNAIIAALGSVLVVTEAGIRSGTMTTAEAAIDLGRALYAIPG 183 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + LI +GA ++++ + +L + A ++ Sbjct: 184 SIFSPTSAGTNRLISEGARIISDESSLAVSLALDFGTVARAQKDQTSPKS---------R 234 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHV 367 +++ + + + +A R G+ V ++ L + E +G I +P G R H+ Sbjct: 235 IISALLASPSRPEELAMRLGEDVLTLMRTLTDFEASGIIQRLPDGRYTPTREYHL 289 >UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510417 Length = 404 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 106/315 (33%), Positives = 154/315 (48%), Gaps = 12/315 (3%) Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELHALHSFQLAVVGSRA 117 L + + L+ + +P L P L+V G L+ +A+VG+RA Sbjct: 90 HRDLEAVHRLGGRLVIPSDDEWPTALTDLGPAAPLGLWVRGAARLNTALRSAVAIVGARA 149 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG + LA RG+TI SG A GID AH+AA+ G +IA + G++ +P Sbjct: 150 SSNYGTKCASDLAWDLAARGLTIVSGGAFGIDAAAHRAAIAREGTTIAFMAGGVDRFYPV 209 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L +LE GA+VSE + P+ + F RNR+I+ S+ ++VEA RSG+L TA Sbjct: 210 ANTELFQQVLE-DGAIVSETAPGMTPMRHRFLLRNRLIAASSQVTVIVEAGWRSGALNTA 268 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ------FGLHWL 290 R ALE REV A PG + + S G H LI+ A LVT +++E + F L Sbjct: 269 RHALELSREVAAFPGSVYSASSTGTHRLIRAHEAELVTSCTDVIELIGGEEPTLFDDGRL 328 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ S D+A + + + V VA RAG V ++ L LELAG Sbjct: 329 TSEHPSTAASDPVDDLAEREKICVNVLSVTKALDVSTVASRAGLTVSNTLSALAVLELAG 388 Query: 350 WIAAVPGGYVRLRRA 364 A G+V+LR A Sbjct: 389 LSARRESGWVKLRPA 403 >UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiaceae RepID=A4FME1_SACEN Length = 389 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 18/303 (5%) Query: 73 HLIPADSEFYP----PQLLAT-------TDYPGALFVEGELHALHSF--QLAVVGSRAHS 119 L+ + +P L P AL+V G++ S +A+VG+RA S Sbjct: 87 RLVTPEHSGWPHKSFDSLADATAIGLPGMAAPIALWVRGQVAFAESLGTSVAIVGARAAS 146 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YGER F LA G T+ SG A GIDG AH+ AL +IA L G + +P H Sbjct: 147 GYGERVAAEFAHGLAIEGYTVVSGAAYGIDGAAHRGALAAGRPTIAFLACGADIDYPSGH 206 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + L ++ EQ GA+VSE+ P + F RNR+I+ +G +VVEA RSG+ TA Sbjct: 207 SMLLRAIGEQ-GAVVSEYAPGTEPRKHRFLVRNRLIAACGQGTVVVEAGARSGASNTANT 265 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A GR V A+PGP+ + S G H +++ G A+LVT + + E L + Sbjct: 266 ADALGRPVMAVPGPVTSKSSVGCHEMVRSGKALLVTNVDHVREVLSPLGVGP--TTDLPV 323 Query: 299 YSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + +L + D T D +A +G P+ +V L LELAG G Sbjct: 324 PAKATDSLDRVAKQLHDALSDSAATSADELARDSGLPLRKVRALLPALELAGLAVREERG 383 Query: 358 YVR 360 + R Sbjct: 384 WSR 386 >UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillus RepID=C0WTK6_LACBU Length = 292 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 12/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID------AVVLQQTGLTLRQAQRFLS 54 M+ + LR+ + + +I W+ Q +++ + RF S Sbjct: 2 MLLRDFLLRIHLCNGIGIVGKSKIYDWIQSQKSTRFDVPSVDSLIKIANIRGGNVTRFSS 61 Query: 55 ---FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + E ++ + E YP QL P +F G+L+ L+ L Sbjct: 62 TYIQLMNNSERVDQLVDSE--KWLCICDEHYPYQLKEAYTPPLVMFYRGDLNLLNEQMLG 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + Y + + I SGLA+G+D AH+ + +G +IAV+G GL Sbjct: 120 IVGARDATHYSMEILKQLLPGPLLNKLVIVSGLAKGVDTWAHQCTIANHGRTIAVIGTGL 179 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 N +P + +L + E+ L+SE+P +FP RNRII+GL + VLV EA S Sbjct: 180 NIAYPSMNQQLQQQIAEEQ-LLLSEYPNGSRGYKNHFPERNRIIAGLVESVLVTEAKHHS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 GSL+TA AL+ R V A+PG I + S G + LI GA + ++LE Sbjct: 239 GSLITANLALQNNRNVLAVPGRINHYLSAGTNELIAAGAKPILRSNDVLEEY 290 >UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA uptake n=2 Tax=Oenococcus oeni RepID=Q04F43_OENOB Length = 295 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 121/226 (53%), Gaps = 3/226 (1%) Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + N + YP QL P LF EG L+ L+S + +VG+R Sbjct: 70 EDFINEYEKYRSLN--FLAICDREYPKQLKEIYQAPIILFYEGSLNLLNSPMITIVGTRT 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ F + G+ + SGLA+GID AH+ AL+ G +IAV+GNG N +P Sbjct: 128 MTNYGKKILEEFVPKIIDSGIAVVSGLAKGIDAYAHQLALEKQGTAIAVIGNGTNISYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + + ++ G L+SE+ P Y+FP RNRI++GL+ LVVEA RSGSL+TA Sbjct: 188 ENQSIQKRII-SDGLLLSEYFPKSRPKQYHFPARNRILAGLTSATLVVEAKERSGSLITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A ++ R V A+PG + S G + LI GA V + ++IL + Sbjct: 247 AYATQENRNVLAIPGDLNRNNSNGTNQLIADGAKAVLKIDDILNEI 292 >UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 RepID=B6XX38_9BIFI Length = 455 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 95/392 (24%), Positives = 144/392 (36%), Gaps = 34/392 (8%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G + R + P + W Sbjct: 66 AACKTLDAAFINGITRWGRSINSRGMASFH--GAMVSWQHRLTTLPSTDPDELKDWFTVG 123 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYG 122 ++ +P QL P L+ +G + VVGSR S YG Sbjct: 124 GTQWIVAPHHPCWPSQLADLTMYTDWAAPLCLWGQGNPQALVSCPEPIGVVGSRGVSEYG 183 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + + A G I SG A G D AH A+Q G ++AV GLN I Sbjct: 184 RQSAHELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGAPLAGRTVAVFAGGLNHI 243 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + RL +++ GAL+SE P A F RNR+I+ LS ++V +A RSG+L Sbjct: 244 GPKSNERLFETIISHSGALISELCPGTAPEARRFLIRNRLIAALSSSLIVAQARARSGAL 303 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E R VFA+PG + P + G + LI++G A ++ +I E P Sbjct: 304 NTAGWANELNRRVFAVPGDVTMPHNTGCNRLIQEGRANIICSLTDIDEFCHASHRPQPIV 363 Query: 294 PENSFYSPDQQDVALPFPELLANV---------GDEVTPVD---VVAERAG---QPVPEV 338 + DV + + D + P+ + Sbjct: 364 IDGEQTEKPADDVLPESDDTTRIILKAIRKCDAKYGHVSTDGLLAILAETNPEEYPISRI 423 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRACHVRRT 370 V +L LEL G I+ G + +R Sbjct: 424 VLELGVLELNGLISTQHGNITIVNANTTQQRN 455 >UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W189_9ACTO Length = 402 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 19/333 (5%) Query: 47 RQAQRFL-SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHA 104 + QR+L +IE +L++ L+ +P QL P AL++ G Sbjct: 69 QAIQRWLPRVAEANIEQQFEYLQRLGGRLMYPQHPDWPGQLNDLGEYAPLALWMRGNFEL 128 Query: 105 LHSFQL-AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL------ 157 + ++VG+RA + G++ L G + SG A GID AH+ AL Sbjct: 129 AQPREWVSLVGARASTNLGDQLAAELSFDLVNAGFGVVSGGAFGIDTAAHRGALTVASQV 188 Query: 158 -QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 +IA + G+ ++P L LL+ G +VSE P P + F RNR+I+ Sbjct: 189 SSEALATIAFMAGGVGQLYPASQLDLFNRLLD-VGLVVSEVPPSWRPARWRFLSRNRLIA 247 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTE 275 S +VVEA +RSG+L TA ALE GR V A+PGP+ + S G H LI++ G LVT Sbjct: 248 AFSAATVVVEAGVRSGALATAHRALELGRPVGAVPGPVTSQMSFGCHQLIRECGVTLVTN 307 Query: 276 PEEILENLQFGLHWLPDAPENSF-------YSPDQQDVALPFPELLANVGDEVTPVDVVA 328 +++ E L S + D + + LA VA Sbjct: 308 AQQVGELFLGLGAGLTGGALASEGVQSELVFVSDDFNNPVHERVWLALPKYGEATFVSVA 367 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + AG V EV + L +AG + R+ Sbjct: 368 KVAGLSVSEVSAAVSALLVAGKVEVFGDKCRRI 400 >UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBZ5_9ACTN Length = 309 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 132/295 (44%), Gaps = 6/295 (2%) Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 +++ L E YP + D P L+ G+ AL + L+V+GSR S YG Sbjct: 5 AMDRFEIRL---GEEGYPESVAELPDPPSVLYGRGDPSALSTPALSVIGSRRASPYGIAV 61 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 L A GVT+ SG ARG D A +AAL G + VLG G + ++P L Sbjct: 62 AELTGRIAAESGVTVVSGGARGCDQAAGRAALDAGGRHVVVLGTGADVVYPATSRTLIDR 121 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 ++ G +S P PP + FP+RNR+I+ LS+ LV EA + SG+ TA A GR Sbjct: 122 AIDASGCALSIEPWGTPPQKWAFPKRNRVIAALSRATLVAEAGMPSGTFSTAETANALGR 181 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 EV A PG I +P S G ++LI GA + + E + + L +P Sbjct: 182 EVLAAPGSIFSPESRGSNYLIANGACCIADDESLEVAISRIYGTLRFC---RGGAPGLSG 238 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + + + +A +T L LE+AG + + G V Sbjct: 239 LDGAERKAMDMLVANPLRPEELAAHLRLDAIACLTMLSSLEVAGMVTRLSDGRVS 293 >UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=85 Tax=Streptococcaceae RepID=A4W1C0_STRS2 Length = 318 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 + YP L + P LF +G+L L +LAVVG+R S G + + + L+ Sbjct: 111 SILDDIYPLALKQIYNPPVLLFYQGDLELLEKLKLAVVGTRNASKNGIQSVQKIIKELSN 170 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 R I SGLARGID AH A+L+ G +IAV+G GL+ I+P+ + L + + +++ Sbjct: 171 R-FVIVSGLARGIDTAAHIASLKNGGQTIAVIGTGLDNIYPKENKDLQTYIGKHH-LVLT 228 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E+ PL Y+FP RNRII+GL +G++V EA +RSGSL+T ALE+GREV+A+PG I Sbjct: 229 EYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGREVYAIPGSIM 288 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + S+G H LI++GA VT +I+ QF Sbjct: 289 DGKSDGCHHLIQEGAKCVTSGLDIISEYQF 318 >UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS Length = 302 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 4/282 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFPRKSIESS 63 L L L G + +R++ V + A + +R A LS + Sbjct: 15 LALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHG 74 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ D + +P L +D P LF G L + +VG+R + G Sbjct: 75 IQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGV 134 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R F + A G+ I SGLARGIDG HK AL G ++AVL G++ ++PR ++ LA Sbjct: 135 RNSLAFSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLACGVDQLYPRSNSALA 194 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 A ++E GG ++SE+ + Y FP RNR+ISGL++ ++V+EA +SG+L+TA CALEQ Sbjct: 195 ARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPKKSGALITALCALEQ 254 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 GR+V+ + + +EG L +GA +T +++ ++ ++ Sbjct: 255 GRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEY 296 >UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K4_HYDS0 Length = 333 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 30/354 (8%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLS-FPRKSIESSLCW 66 L SI + + R I + + F + + +++ Sbjct: 2 LKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIK 61 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L+Q N I +++ YP +L D P +F++G+ L +++VGSR Sbjct: 62 LKQLNIEAITYENKLYPANMLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMT 121 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + L T+ SG A GID AH++AL+ + +IAVLG G ++ ++ L + Sbjct: 122 KSVVSELRQ---TVVSGGADGIDSKAHQSALEESVPTIAVLGFGF--LYAKQS--LFGKI 174 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 L++ G L++EF P Y FP RNRII+ L +LV++A+ +SG+L++A A + ++ Sbjct: 175 LDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKK 234 Query: 247 VFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 VFA G EG L+++ A L T + ++L + Sbjct: 235 VFAYVGNP-VEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPIL------- 286 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + D+ D + + ++ +L LE+ G+I+ G Y Sbjct: 287 ----------SFLDKPCTFDELLVKTNYDEEKLTMELTMLEIEGYISKD-GAYF 329 >UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y5_9CLOT Length = 329 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 9/306 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW-----VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M + E+ + L I L + +I + ID + + + L + Sbjct: 7 MNNAELIITLTLIKGLGRKTINKIIRQGVLNSLETIETIDYLNNINLKIKGIITKDELKY 66 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + ++ ++ + + E +P +L D P ++ +G+ + L+ +A++GS Sbjct: 67 ANEVAKRTIEICDREDIKISTLLDEDFPQKLKNIDDNPVIIYSKGDYNNLNDKGVAIIGS 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S +G L+ + TI SGLA G D AH +L G +IAV+ GL+ ++ Sbjct: 127 RNPSLHGVNVSYKISSILSQKNYTIVSGLANGCDTFAHLGSLDTYGKTIAVMPCGLDMVY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L ++ G ++SE+P Y R+R+ S LS+G++V+E GSL Sbjct: 187 PNNNCDLFKRIINNNGCVISEYPPSQAVSKYRLIERDRLQSALSEGIIVIETTENGGSLH 246 Query: 236 TARCALEQGREVFALPGP---IGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLP 291 T A +Q + V +G L++ I + + + + E L+ ++ Sbjct: 247 TVNYAFDQNKIVSCYKHNKNYSNLKTVKGNIKLLQNDEVIPIYDTKSLNEFLKKVDNFYK 306 Query: 292 DAPENS 297 N Sbjct: 307 YQNTNQ 312 >UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BVH3_9BIFI Length = 456 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 141/377 (37%), Gaps = 37/377 (9%) Query: 16 LYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH-HL 74 L + I W + G + R + P E W + Sbjct: 73 LDAALINGITRWGRTINARGMASFH--GAMVSWQHRLTTLPSTDPEELKTWFTANGTQWI 130 Query: 75 IPADSEFYPPQLLAT-----TDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYGERWGR 127 + ++P QL P L+ +G+ S + VVGSR S YG + Sbjct: 131 VAPHHPYWPSQLADLTIHTDWAAPLCLWGKGDPQALVSCSEPVGVVGSRGVSEYGRQSAH 190 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTIHPRRH 179 + A G I SG A G D AH A+Q G ++AV GLN I P+ + Sbjct: 191 ELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGTPLAGRTVAVFAGGLNYIGPKSN 250 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 RL +++ GAL+SE P A F RNR+I+ LS ++V +A RSG+L TA Sbjct: 251 ERLFETIINHSGALISELCPGTVPEARRFLIRNRLIAALSSTLIVAQARARSGALNTAGW 310 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A E R VFA+PG + P + G + LI++G A ++ +I E ++ Sbjct: 311 ANELNRRVFAVPGDVTMPHNTGCNRLIQEGQASIICSLTDIDEFCHAAHRPQSADAADND 370 Query: 299 YSPDQQD-------VALPFPELLANVG-----DEVTPVDVVAERA------GQPVPEVVT 340 P ++ +L + D + + + Sbjct: 371 DEPSEESTDTSLSQPTNATAAILKAIRTCSAKYGHVSTDGLLAILAESNPGEYSISRISM 430 Query: 341 QLLELELAGWIAAVPGG 357 +L +EL G I G Sbjct: 431 ELGLMELNGLICTQHGN 447 >UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter sp. FB24 RepID=A0JXT1_ARTS2 Length = 394 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 105/340 (30%), Positives = 150/340 (44%), Gaps = 11/340 (3%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DY 92 + G++ + P + E L + + +I +P QL Sbjct: 58 AENGTASWPGMSASLRRWAPRIPDLAPERDLATMHRLGGRMIMPSDSLWPGQLADLDLHE 117 Query: 93 PGALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P L+ G + +A+VGSR + YG +LA RG TI SG A GID Sbjct: 118 PICLWWRGTEHPLPAAAKSIALVGSRDSTSYGAAVTGDLAYSLAQRGFTIVSGGAYGIDA 177 Query: 151 VAHKAALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 AH+AAL G +IAV+ G++ +P + L + GA+++E P P Y Sbjct: 178 HAHRAALAGAGDAMPTIAVMAGGVDRFYPSGNEELL-RTVANQGAVLAEVPPGSAPTRYR 236 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F +RNR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H LI+ Sbjct: 237 FLQRNRLIAALSSVTVVVEARWRSGALNTAHHAESLGRAVGAVPGSVHSANSAGCHRLIR 296 Query: 268 Q-GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVT-PVD 325 + GA+ VT+ EI E L E S D + L LL + T V+ Sbjct: 297 EGGAVCVTDAGEIAELASSSGESLA--DEAPAQSADHDGLTLEDLILLDALPLRSTSSVE 354 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + AG V L L L G + GG+ R R+A Sbjct: 355 KLTSVAGLSTDAVRAGLGRLGLLGLAESERGGWKRSRKAG 394 >UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ46_9FIRM Length = 500 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 4/283 (1%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES 62 E ++ L+ I + + + + + + + + Sbjct: 2 EYYIYLLQIFGGGNPKIHEVIKAYGNARLAYEHISSGDMSHIPSNRHEYVRRASLERSKV 61 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWY 121 + + N ++ D YP QL + P LF G+++ L +++VG R Sbjct: 62 IMDYCAGNNIGIVTIDDRNYPEQLKNIYNPPVLLFTAGDINCLQGKLAVSIVGPRKPFGN 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R C LA + + SG A GID +AH +++ + ++AVL G+ +P Sbjct: 122 AIRLAENICYNLARSDIVLVSGFALGIDRIAHNNSIRHHKPTVAVLACGITIDYPNNSFG 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++++ GG ++SE D P + F RNRIISGLSKG +V+ SGSL+TA A Sbjct: 182 LRKNIIDNGGLILSELLPDTPCNSDYFKFRNRIISGLSKGTVVIGGYNGSGSLITANHAF 241 Query: 242 EQGREV-FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 EQ REV F +P + ++ GA V + +I+ Sbjct: 242 EQDREVFFTIPDDTLDKKYSRVIRFLRDGAHSVYDFYDIINEF 284 Score = 41.4 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%) Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + +D + E+ L +LE++G I+ GG +++ Sbjct: 452 NSDGVTLDALLSACSLSFGELSEILADLEISGTISCGAGGIYTVKKER 499 >UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID=Q6GHI6_STAAR Length = 290 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 135/272 (49%), Gaps = 14/272 (5%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 I + WV ++ ++ + R+ F+ I L L+ Sbjct: 30 IKEGGRKKDSYLCEWVNREENVHLL---------RKYYAFIKLDHNDIIKELQKLK---V 77 Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCE 131 I YP L +P LF G + +++ LAVVG+R + Y ++ Sbjct: 78 SYITYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLS 137 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 ++ +TI SGLA+G D +AH+ AL+ N +IAVL G T +P+ L + E+ G Sbjct: 138 NDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTHYPKSTLALRNKI-EEIG 196 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 ++SE+P P Y FP RNRIISGLSKGVL+ EA +SGS +T ALEQ R V+ LP Sbjct: 197 LVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHITIDFALEQNRNVYVLP 256 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G + NP ++G I++GA +V +I E+ Sbjct: 257 GSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RAN2_GARVA Length = 514 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 98/386 (25%), Positives = 156/386 (40%), Gaps = 44/386 (11%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHID--------AVVLQQTGLTLRQAQRFLSFPRKSIE 61 L I ++ + ++ K + R L P + E Sbjct: 118 LSFIKK--HKELALLENYFKKGLTAWGYHNNNAPKSLEVLHNSISTWCVRLLHLPTWNSE 175 Query: 62 SSLCWLEQPN-HHLIPADSEFYPPQLLATTD-----YPGALFVEGELHA--LHSFQLAVV 113 S W +I S+++P QL P L+ G LA+V Sbjct: 176 SLCQWFTCGGKQWIIAPHSKYWPKQLQDLAFQSHFSPPLCLWGVGNPQTLTQCHNPLAIV 235 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIA 165 GSR+ + YG F A++G T+ SG A GID AH AL G +IA Sbjct: 236 GSRSCTDYGRELAYQFAYDCASKGHTVISGGAYGIDAAAHWGALDAQDIDENKPTGKTIA 295 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V GLN + PR + +L ++ +GG +SE D P+ + F RNRII+ L+ ++V Sbjct: 296 VFAGGLNHMGPRCNYQLFEQIIAKGGVCISELCPDTTPVGHRFLLRNRIIAALASKIIVA 355 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQ 284 +A L+SG+L TA A + RE++A+PG I P + G + LI AI++ ++I Sbjct: 356 QARLQSGALNTATWATDLNRELYAIPGDINQPNNAGCNKLIHDSQAIILCSTQDIDILFP 415 Query: 285 FGLHWLPD-APENSFYSPDQQDVALPFPELLANV-----GDEVTPVDVVAERAGQ----- 333 H+ P+ S D ++ ++ + E+ VD + E Sbjct: 416 QSHHYFAYSQPKPEKLSIDYKNYDNTQKLIIDAITTCKRKHELANVDRIYEIIKTSYKEK 475 Query: 334 ------PVPEVVTQLLELELAGWIAA 353 + E+ ++ LEL G I Sbjct: 476 QLDYIPSIAEISGKIALLELEGIIVQ 501 >UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CWR3_GARVA Length = 504 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 92/350 (26%), Positives = 149/350 (42%), Gaps = 34/350 (9%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFYPPQLLATTD-----YPGALFVE 99 + R P W +I +S+++P QL P L+ Sbjct: 155 KKWCLRLKQLPSWDSNQLKRWFSSNGTQWIISPNSKYWPKQLQDLATQCQVAPPLCLWGI 214 Query: 100 GELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G+ + + LA+VGSR + YG F ++ A +G T+ SG A GID AH L Sbjct: 215 GDPNALIQCNQPLAIVGSRGCNDYGYELSFTFAKSCAKKGHTVISGGAYGIDAAAHWGTL 274 Query: 158 QV----------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 G +I V GLN + P +A+L ++L GGA +SE D P+A Sbjct: 275 DALDSHVANVNPVGKTIVVFAGGLNKMGPSSNAQLFDAILSSGGACISELCPDTTPVARR 334 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F RNR+I+ ++ V+V +A LRSG+L TA A RE++++PG + +P + G + LI Sbjct: 335 FLLRNRLIAAIASKVIVSQARLRSGALNTANWANSLNREIYSVPGDVTSPSNAGCNMLIH 394 Query: 268 QG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD-----EV 321 G A+++ +I H+LP + N+ PD +L + + Sbjct: 395 DGKAMMICSQNDIDSIYPNSHHYLPHSLSNNNIIPDT--CNDFQKIVLKAIQECKSKKIC 452 Query: 322 TPVD---VVAERAG----QPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 +D + + ++ ++ LEL G + G L R Sbjct: 453 ANIDNIHAIMLHTNSNNDFSISKISGEIAILELNGIVKNQNG-VFSLNRK 501 >UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavobacteriaceae RepID=C6WZG8_FLAB3 Length = 342 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 10/338 (2%) Query: 29 AKQSHIDAVVLQ----QTGLTLRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 + + G+ + + + E L + E+ N + P Sbjct: 5 GSAKEVWELSKSGLKNIYGIGKKISFEIGKAEHLLFAEKELSFCEKNNITINLRHLGHLP 64 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 L D P L+ +G L +++VG+R + YG+ + F + T + SG Sbjct: 65 THLNECEDAPAVLYQKGNLD-SSLSAVSIVGTRNITTYGKSFISDFLADVKTHKILTVSG 123 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 LA G D H+ ++ N + AVL +G +T++P ++ RLA +LE GG L++EF P Sbjct: 124 LALGADTEVHEVSINNNIPTAAVLAHGFHTMYPSKNRRLADKILEDGGVLLTEFNSSQKP 183 Query: 204 LAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPH 263 NF +RNRII+G+S +VVE A GS+ TA A REVFALPG I + S+G + Sbjct: 184 DRENFIQRNRIIAGISPATIVVETAFGGGSVSTATFANNYNREVFALPGKITDKYSQGCN 243 Query: 264 WLI-KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEV 321 LI + A ++ + E L LH S + + LL + + Sbjct: 244 QLIFQNKAAAISTVSGLAEQLG--LHKTEQTGVLFPSSEIRIKLPEQQLILLEALDKNTP 301 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +D V+ + P ++ LLELEL G+I A+ G Sbjct: 302 LSLDDVSLKLDVPAYRILPDLLELELLGYIRALSGRQY 339 >UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URR9_9AQUI Length = 336 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 11/285 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS--FP 56 M E+WLRL + + R+ +I + + + +A+ LS F Sbjct: 1 MGSFELWLRLKLTKGVGEITLYRLYKTFGGAENILSADYKDLKGCVGESRARAILSGDFD 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 K E L +E + ++I + E YP L D P +F+ G L + +VG+R Sbjct: 61 EKVYEEVLRAVESGSIYVITLEDEEYPSALKRIKDPPPLVFLRGSLR--KLPLVGIVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y + +RG + SG A G+D AH +A++ +G ++ +LG G+ Sbjct: 119 KPTPYTLNFVEELVSMAVSRGYGVVSGGAAGVDSKAHLSAVENSGYTLCILGFGIL---- 174 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ S+ E GGAL+SEF + FP+RNR+I+ LS+ ++V EA SGSL+T Sbjct: 175 KARGKVFESISESGGALLSEFLPHERGDRHTFPKRNRLIAALSEFIVVPEAGGSSGSLIT 234 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEIL 280 A A++QG++V+A G + +G + L+++G A L+ + + Sbjct: 235 ADHAVKQGKKVYAHIGIGRSSSWDGCYRLVREGKAELIKDGSHVF 279 >UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter sp. AK-1 RepID=A6YFL4_9MICC Length = 399 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 129/303 (42%), Gaps = 22/303 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH------------IDAVVLQQTGLT-LRQ 48 + L + + + + V ++ R Sbjct: 96 ENRIARAALTRMFAPTDLVARALVARHGAHAAYRMALGARPVFPFWDVTAEELADGLDRW 155 Query: 49 AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA---L 105 A R + E+ L +E+ + E +P L D P L+ G++ Sbjct: 156 APRPRELDTHAAEADLAAIERLGGGFLVPGDEHWPTGLDDLPDAPYGLWYRGDIGNGIPA 215 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----NG 161 S A+ GSR + YG LA RG+ + SGLA GID AH+AAL Sbjct: 216 PSRCAALTGSRDSTSYGAAVTGDIAYGLAQRGICVISGLAYGIDAHAHRAALAGSQGDGP 275 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +IAVL GL+ +P +A LAA++ G +SE P P F +RNRI++ L+ Sbjct: 276 ATIAVLAGGLDRDYPSGNADLAAAIRA-NGLTLSELPPGTAPSRARFLQRNRIVAALAGV 334 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEIL 280 VVEA RSG+L TA A R V A+PG + + S G H L+K+G A LVT+ E+ Sbjct: 335 TCVVEARWRSGALNTAHHAETIARHVAAVPGSVHSANSAGCHRLLKEGIAALVTDAAELT 394 Query: 281 ENL 283 E L Sbjct: 395 ELL 397 >UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteriaceae RepID=C7MNC4_CRYCD Length = 328 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 91/256 (35%), Positives = 124/256 (48%), Gaps = 3/256 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + S YP L P L+ G L +L LA++G+R + YG F A Sbjct: 33 VSIGSSTYPKALTCINKPPHTLYGIGSLESLEE-GLAIIGARRATPYGLSCAERFARHAA 91 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 RG+ I SG ARG D AH+AAL+ G ++A LG G + +P H L ++ GGA+V Sbjct: 92 QRGICIISGGARGCDARAHRAALEAGGRTVAFLGGGCDQPYPPSHVPLFQEIINNGGAIV 151 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE D P L Y F RNR+I+GL+K L+VEA + SG+ TA ALE REV A+PG I Sbjct: 152 SENEWDFPALPYTFRARNRLIAGLAKATLIVEAGIPSGTFSTADEALEANREVLAVPGAI 211 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP--DAPENSFYSPDQQDVALPFPE 312 +P S G + LI QGA + + E L L + + + Sbjct: 212 TSPTSAGANRLIYQGATPIVDDETFDTALSSLFCLLKQECIHMDDDSKSLELPLDAVTQA 271 Query: 313 LLANVGDEVTPVDVVA 328 LLA + E D + Sbjct: 272 LLAALRAEPLRTDTLI 287 >UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcineae RepID=B8HA87_ARTCA Length = 402 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 143/311 (45%), Gaps = 11/311 (3%) Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGAL 96 +GL + P + E L + + LI E +P QL P L Sbjct: 70 SANWSGLAASLKRWQPRIPDLAPERDLATMARLGGRLIVPSDELWPGQLSDLGIQEPICL 129 Query: 97 FVEGELHALHSFQLAV--VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 + G L + + ++ VGSR + YG +LA RG+T+ SG A GID AH+ Sbjct: 130 WWRGHEQPLPALECSIALVGSRDSTSYGASVTGDLAYSLAQRGMTVVSGGAYGIDAHAHR 189 Query: 155 AALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AAL +IAV+ G++ +P + L ++ Q GA+++E P P Y F +R Sbjct: 190 AALAGGSGAVPTIAVMAGGVDRFYPSGNEDLLRAVCNQ-GAVLAEVPPGSAPTRYRFLQR 248 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GA 270 NR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H L++ GA Sbjct: 249 NRLIAALSAVTVVVEARWRSGALNTAHHAETLGRAVGAVPGSVHSANSAGCHRLLRDGGA 308 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAE 329 + VT+ E+ E LPD + + D + L LL + T V+ +A Sbjct: 309 VCVTDAAEVAELAAPSGTALPDLRQGAAQVQD--GLTLEDLILLDALPLRSTTSVEKLAA 366 Query: 330 RAGQPVPEVVT 340 AG V Sbjct: 367 VAGLGQDSVRA 377 >UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ3_ATOPD Length = 291 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 9/285 (3%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I ++ E YP +LL P ++ G+ L S ++V+G+R + YG + A Sbjct: 6 ISSEDEDYPSELLLLNHPPEIIYGMGDRSVLQSPCMSVIGARRATPYGIAIAEMAGRCAA 65 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + + SG A G D A AAL G ++ V G G + +P L + E GA++ Sbjct: 66 DNNIVVVSGGALGCDNAAGMAALNAGGKTVVVAGCGADVTYPTTSLDLFEAAREGKGAVI 125 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 S PP Y FPRRN +I+ L K +LV EA L SG++ TA A G+ ++A+PG I Sbjct: 126 SLDRWGTPPRRYAFPRRNAVIAALGKVLLVTEAGLCSGTMSTAEFANSLGKTIYAIPGSI 185 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 + S G + LI +GA ++ + + + + + +Q LL Sbjct: 186 FSLASAGTNRLISEGAQIIPDETSL---------GIAISLDYDCLVREQMKQDKKLTPLL 236 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + + +A R + V V+ L + E G + +P G Sbjct: 237 SALIASPSRPEELAWRLSENVLTVLNSLTDYEARGMVKRLPDGRY 281 >UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus RepID=Q2YXL9_STAAB Length = 290 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 11/291 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV-----VLQQTGL--TLRQAQRFL 53 M++ I L+L+ S + + +D + L + + Sbjct: 1 MLN-HILLKLI-WSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVN 58 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAV 112 + S++ +++ + I YP L T +YP LF + ++ L S LAV Sbjct: 59 RYKEISVDEIETTIQKTQLNYITCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAV 118 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGS Y + + + SGLA+G D +AH+ AL+ N +IAVL G Sbjct: 119 VGSPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQ 178 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 T +P+ L + E+ G ++SE+P P Y FP RNRIISGLSKGVL+ EA +SG Sbjct: 179 THYPKSTLALRNKI-EEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSG 237 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 S +T ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 238 SHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pestis Angola RepID=A9R928_YERPG Length = 247 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 115/238 (48%), Positives = 146/238 (61%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M+ E+WLR+ + L +A + I L GL +Q +F + I Sbjct: 1 MLAAELWLRMTQVKGLGVVKRSALAKRLLASGDIHPGRLAAYGLDSQQCHQFAQLSPRYI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +L WL PNHHL+ YPP+L+ P LFV GEL L+ Q+A+VGSR S Sbjct: 61 ADTLEWLSDPNHHLLTYGEPGYPPRLVHIAGAPLVLFVSGELDVLYRPQIAMVGSRHFSH 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA G+ ITSGLA GIDG+ H+AAL + G +IAVLG+GL I+P+RH+ Sbjct: 121 YGEQWGRYFASELARTGLVITSGLAVGIDGICHQAALNIQGRTIAVLGSGLENIYPQRHS 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 RLA + QGGALVSEF P+A +FPRRNRIISGLS VLVVEA L+SGSL+ R Sbjct: 181 RLAKEIEYQGGALVSEFLTTALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLIVPR 238 >UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38WY7_LACSS Length = 288 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 16/292 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 ++ L++ + +R+A W++ + + L + Q R + + Sbjct: 3 TKNQLLLKVHLAAGFGTISELRLAAWLSTSHN-----WALSALEIAQIARLPERYWPTFQ 57 Query: 62 SSLC--WLEQPNH------HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 +S L++ + + YP +LL T P LF G+L L LAVV Sbjct: 58 ASFQSTTLQRQCIDHEVRTTYLTILDKDYPQRLLETYLPPVLLFYRGDLRLLKQPCLAVV 117 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + Y ++ + L TI SGLA+G D +AH+ ALQ I V+G G+N Sbjct: 118 GARQATHYSKQSLEQLLQGLTA--TTIISGLAQGADAMAHEVALQRGLAPIGVIGTGINC 175 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P ++ L ++ + G L+SE+ L P Y FP RN+II+GL ++V EA +SGS Sbjct: 176 SYPPQNEHL-QQVVAEKGLLLSEYALGTPARRYQFPARNKIIAGLCHSLIVTEARHKSGS 234 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 L+TA AL+ R V+A+PG I S+G + LI GA + + ++E L++ Sbjct: 235 LITANLALQANRNVYAIPGRIDQSLSQGCNQLIAAGATPLLDKNILIEELRY 286 >UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NW70_9BACL Length = 296 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 4/287 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-TLRQAQRFLSFPRKSI 60 + L L++I + + R+ + + I + + + + A+ + ++ Sbjct: 11 EQKRVLLSLVAIEKVTTLKLHRVFNDLNSIEKILDLSVPELAVYFGSNAEEIYTKLHNNM 70 Query: 61 ESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAH 118 E + E + D +YP + DYP +F G L ++++VGSR + Sbjct: 71 EFDFESYFEFYKVKYMFCDDVYYPKEFFRVYDYPYVIFYRGNKDLLLFRRKISIVGSRNN 130 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + Y + L+ I SGLA G+D +AH+ AL+ G +I V+ +G N I+P + Sbjct: 131 TSYSKDALDCIVPYLSMNNFVIVSGLATGVDSLAHEGALKSKGYTIGVIAHGHNIIYPEQ 190 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 +L LE+ ++SE+ P Y F RNR+++GLS +LV EAA RSG+ T Sbjct: 191 SYKLYKE-LERNHLIISEYFPTSPIRKYKFLERNRLVAGLSSALLVTEAAKRSGTQRTVD 249 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 AL+ G +VF LPG G+ S + IK+GAILV + E+ + L F Sbjct: 250 FALDVGSDVFCLPGKFGDKMSYAMNEYIKEGAILVNKLEDFGDELGF 296 >UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AEB0_LEIXX Length = 411 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 24/368 (6%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHI----DAVVLQQTGLTLRQAQRFLSFPR-----KS 59 + +++L +R + L + R L R S Sbjct: 55 AVALLTALGARRTLRAVALGESGESVRERTLRSEAHDPALNAERINRALQRWRTRLGQDS 114 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALH--SFQLAVVGSR 116 +L L+ DS F+P L + P AL+V G+ +L +++VGSR Sbjct: 115 PARALHRAHLLRVTLVLPDSPFWPSGLDSLEHGRPLALWVRGDPSSLSGLRRSISLVGSR 174 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG L+ RG I SG A GID AH+AA+ + +++ L G + ++P Sbjct: 175 TATGYGTHVALESSAGLSDRGFAILSGGALGIDAAAHRAAIASHRLTVCSLAGGADRLYP 234 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L +L G +++E P P + F RNR+I+ +S+ +V+EA RSGSL T Sbjct: 235 AANTELLTRILAS-GLILAELPPGSAPTRWRFLMRNRLIAAVSQATVVIEAGRRSGSLNT 293 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A A + GR + A+PGP+ +P S G H LI++ A VT EE+ E PD Sbjct: 294 AGHAAQLGRPLGAVPGPVTSPESAGCHRLIREYAATCVTSAEEMAELADPFTVAGPDPVA 353 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + ++++ VA R G E+ L + G Sbjct: 354 EPVDTRILRELS----------RTAPRSRIDVAARTGIEPAELSAALGRMSALGLAIESA 403 Query: 356 GGYVRLRR 363 GG+ ++R Sbjct: 404 GGWRAVQR 411 >UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9_9BIFI Length = 422 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 98/384 (25%), Positives = 146/384 (38%), Gaps = 39/384 (10%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G QR + P + CW Sbjct: 33 AACKALDAAFINGITRWGRTINARGMSSFH--GSLASWQQRLATLPSHDPQQLECWFTAA 90 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYG 122 +I ++P QL P L+ G+ + +VGSR S YG Sbjct: 91 GTQWIIAPHHPYWPSQLADLSLRTDWAAPLCLWGRGDPEALVSCPKPVGIVGSRGVSDYG 150 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + A G T+ SG A G D AH AL +G ++AV GLN I Sbjct: 151 RQCAFELARQAARAGHTVVSGGALGTDAAAHWGALAAMDEVGAGISGRTVAVFAGGLNHI 210 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ +ARL +++ GALVSE P A F RNR+I+ LS V+V +A RSG+L Sbjct: 211 GPKSNARLFERIVDGKGALVSELCPATIPEARRFLLRNRLIAALSSTVIVAQARARSGAL 270 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E RE++A+PG + P + G + LI+ G A +V +I E A Sbjct: 271 NTAGWAGELNRELYAVPGDVTMPHNTGCNRLIQDGKASIVCSLSDIGELCHEAHRPHITA 330 Query: 294 PENSFYSPDQQDVALPF---------PELLANV-----GDEVTPVDVVAERAG------Q 333 + P D ++L + D + + Sbjct: 331 SSKAEDLPPSDDPDHCKEDDGTNTAGNDILHAIRACRSRYGTVSADGILDMLNESHPDEY 390 Query: 334 PVPEVVTQLLELELAGWIAAVPGG 357 + ++ +L LEL+G I G Sbjct: 391 SIAAIMQELGALELSGIITMEAGR 414 >UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=Staphylococcus epidermidis RepID=Q5HPU3_STAEQ Length = 290 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 2/240 (0%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + R ++ F + + +++ N + YP DYP +F +G Sbjct: 50 SERLWNKYERFKELKLMDIIKEMKKANVSFTTYFDDNYPSLCKEMYDYPYVIFYKGNPQF 109 Query: 105 LHS-FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + LAV+GSR + Y + + + I SGLARG D VAH+ AL+ + Sbjct: 110 FNHSHSLAVIGSRNATQYTSQSLNYLFPSFRQLNMAIVSGLARGADSVAHQTALKYLLPT 169 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I VLG G +P+ L +E+ G ++SE+P P + FP RNR+ISGLS+GVL Sbjct: 170 IGVLGFGHCYHYPKATLNLRTK-VERNGLVISEYPPFSPISKHKFPERNRLISGLSRGVL 228 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + EA RSGS +T CALEQ R V+ LPG + N ++G I +GA +V + IL + Sbjct: 229 ITEAEERSGSQITIDCALEQNRNVYVLPGSMFNKMTKGNLRRINEGAQVVIDESSILYDY 288 >UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus RepID=B3WEA3_LACCB Length = 271 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 88/285 (30%), Positives = 129/285 (45%), Gaps = 16/285 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L + V + +R + + Sbjct: 1 MTLRNFLLAWHIATRQNPRMAVAL-------EQAIRGKDDLAPFQAELKKRLTDQYSQQL 53 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + + + YPP+L P LF G+ L+ L +VGSR + Sbjct: 54 ------IAAKHVPFMTYVDAAYPPRLREIPQPPLVLFYRGQSGLLNQLTLGIVGSRRATG 107 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Y L + + I SGLA G D +AH+AAL +IAV+ NGL+ ++P ++ Sbjct: 108 YSATALAQLLPQLPS--MVIASGLAAGADAMAHEAALSARLPTIAVIANGLDQVYPAKNR 165 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + G ++SE+P P + F RNRII+G++ GV+V EA ++SGSL+TA A Sbjct: 166 DLQVQI-AHVGLVLSEYPPATGPQRFQFVARNRIIAGIAHGVMVTEAEMKSGSLITANYA 224 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 L+ REVFALP I P G + LI+ GA LVT PE ++ENL F Sbjct: 225 LQHNREVFALPNRIDAPLGAGTNALIQAGAALVTGPETLVENLNF 269 >UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N591_SLAHD Length = 319 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 16/300 (5%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + E +P L + P L+V G+ LAVVG+R + YG+ LF A Sbjct: 18 LSLGEEGFPAALQSIPHPPKELYVVGD-PGALREGLAVVGARKATPYGKNAASLFAGMAA 76 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV + SG A+G D AH+AAL+ G ++ LG G + +P + L +++ GGA+V Sbjct: 77 RHGVVVVSGGAKGCDAAAHRAALEAGGTTVCFLGGGCDMPYPVENFDLFQQVVDAGGAVV 136 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P P Y F RNR+I+GL+K L+VEA L SG+ TA AL ++V +PG I Sbjct: 137 SEHPWTFHPKPYTFRTRNRLIAGLAKATLIVEAGLPSGTFSTADEALSANKDVLVVPGSI 196 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEI-----------LENLQFGLHWLPDAPENSFYSPDQ 303 + S+G + L+ QGA V + E L ++ H ++ S Sbjct: 197 FSATSKGANRLLHQGATPVVDEETFDMLLQSLFPHYLPDVGQQAHLPLFGNVSAASSVAT 256 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERA----GQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + E+ ++ +D + E+ GQ +V + ELE G + P G Sbjct: 257 RKLEGLSLEVFRSLEANPMRMDEIIEKCSEGVGQGPQGIVKAIAELEARGVVERYPDGRF 316 >UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longum RepID=B7GSU6_BIFLI Length = 566 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 85/337 (25%), Positives = 123/337 (36%), Gaps = 32/337 (9%) Query: 9 RLMSIS-----SLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 L I L A+ + + A R + P + I Sbjct: 86 ALSRIDRMFVDGLTRWGRKASANAMRSFRNALA----------GWHNRMMDLPSQDIIQL 135 Query: 64 LCWLEQPNH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELH--ALHSFQLAVVGS 115 W +I +P QL P L+++G+ + + +VGS Sbjct: 136 ADWFTMDGTQWIIGPGHPCWPSQLADLSIRSDWAPPLCLWIKGDPRALTSCAKPVGIVGS 195 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVL 167 R + YG E A G + SG A G D AH AL G ++AV Sbjct: 196 RDVTEYGRYVAHTVAEQAAVAGHLVVSGGAMGTDAAAHWGALNALHGRMPANVGRTVAVF 255 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GLN I P R+ L + QGGAL+SE P A F RNRII+ +S ++V +A Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPGTIPEARRFLLRNRIIAAMSSTLIVTQA 315 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 LRSG+L TA A E REV+A+PG I P + G + +I ++ E++ Sbjct: 316 RLRSGALNTAGWACELLREVYAVPGDINQPCNAGCNKMIGDHRAMILCAATSTEDICHER 375 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 H QD + + Sbjct: 376 HKPVMGACPGISKSTGQDSSENEEA-MEVPATTPLSP 411 >UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX5_9FIRM Length = 260 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 3/206 (1%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 + YP L P LF +G L +VGSR YG C L Sbjct: 38 YVTWADAEYPALLRQLRFPPWILFYQGNLALADLPATGIVGSRRACRYGLTMTERCCGAL 97 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 I SGLA GIDG AH+AAL++ +I + G GL+ +P + L L + L Sbjct: 98 KDE--VIVSGLALGIDGAAHRAALRLCRGTIGIAGCGLDRPYPAYNRDLYTELPKAN-LL 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P PPL ++FP RNR+I+ LS ++V++A SG+++T A+E REV+ LP P Sbjct: 155 LSEYPPQTPPLKHHFPWRNRLIAALSDRIVVMQAGFHSGTMLTVNEAIELNREVWCLPYP 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEI 279 N EG + LI QGA ++ EP ++ Sbjct: 215 AMNKEGEGCNLLISQGAEILMEPSQL 240 >UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxobacter RepID=B8JES7_ANAD2 Length = 320 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 147/295 (49%), Gaps = 9/295 (3%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + + YP +L + PG L V GEL + +A+VG+RA YGE R Sbjct: 31 SLDARTLRPGDGHYPERLARLAEAPGQLRVRGEL-GTAACSVALVGARATDEYGELLARD 89 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 LA GV++ SG A G+D AH+ AL+ G ++AVLG G++ ++PR+H L +LE Sbjct: 90 LAAGLARAGVSVVSGGAVGVDAAAHRGALEAGGHTVAVLGTGVDVVYPRQHRALFEGILE 149 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GGALVSE P P L +FP RNRII+ L+ V+VV A SGSL+TA A QG +VF Sbjct: 150 TGGALVSELPDGSPGLPRHFPARNRIIAALADAVVVVRARPGSGSLITASWARAQGVKVF 209 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG + + S GP L+++GA + + ++ + + Sbjct: 210 AVPGDVRDALSAGPLALLREGAGVASSAADV--------LAGLGLAAAAPVQAPLPALDD 261 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 LL +G D +A AG PV + LL LEL G PG Y R Sbjct: 262 RGTALLRALGRRPRHADELAREAGIPVGAALAGLLTLELEGLCEQRPGHYFLRRS 316 >UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD50_9FIRM Length = 243 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 6/208 (2%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I + YP P +F +G+++ L + +VG+R S + + L Sbjct: 41 YITIMDDAYPDAFKRLRYPPWIIFYQGDINLLKEKGVGIVGARNCSTQALQNTDRIVQRL 100 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 I SGLA+GID AH A +I VLG G+N I+P+ + L + + G + Sbjct: 101 -QSKYVIVSGLAKGIDARAHYNAT----KTIGVLGCGINVIYPKENTYLFERM-KNNGLI 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P+ V PLAY+FP RNR+I+ LS ++V+EAA +SG+++T LE ++ +P Sbjct: 155 ISEYPMHVKPLAYHFPWRNRLIAALSDSLVVIEAAYKSGTMITVNECLELSVPIYCVPTA 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILE 281 + +G ++LI GA ++ + +++ + Sbjct: 215 FQDEKHQGCNYLISNGANILVDIKDVDD 242 >UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRZ7_9BIFI Length = 481 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 137/368 (37%), Gaps = 41/368 (11%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLL 87 +R +FP ++ + W+ ++ A +P QL Sbjct: 110 GTSPDAVKRHASFQRALKGWLRRRAAFPERTAQDWHEWITVSGTAWVVTASDPLWPAQLE 169 Query: 88 AT-----TDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 P L+ G++ LA++GSRA S YG + G + Sbjct: 170 DLRLHASWAPPLCLWGRGDVRALTACPAPLAIIGSRAVSDYGAHVAQTLAGQAVRAGHAV 229 Query: 141 TSGLARGIDGVAHKAALQV------------------NGVSIAVLGNGLNTIHPRRHARL 182 SG A GID AH A+ G +IAV GLN I P +ARL Sbjct: 230 VSGGAMGIDACAHWGAVDALAAACDGQASLLDSASMPCGPTIAVFAGGLNHIGPSTNARL 289 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GAL+SE P D P+A F RNRII+ LS + V +A +RSG+L TA A E Sbjct: 290 FEHIQTWHGALISEMPPDCAPVARRFLMRNRIIAALSSVICVAQARVRSGALNTAHWAQE 349 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILV----TEPEEILENLQFGLHWLPDAPENSF 298 RE++A PG I G H LI + A + ++I P Sbjct: 350 LNRELYATPGLITRADHTGCHTLIDEQAARILQSCEHIDDICHERHAPHWPSVAEPTADT 409 Query: 299 YSP--DQQDVALPFPELLANVGD--------EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + D++ +L V + + E + +P V L LE+ Sbjct: 410 TADTMQPADLSDNERIVLDAVRQCHRQRVVATASAIGQYCEAS-VAMPVVFAALGALEMR 468 Query: 349 GWIAAVPG 356 G IA G Sbjct: 469 GLIANNNG 476 >UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0K1_ERYRH Length = 259 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 4/207 (1%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 + I YP P +F EG L L+ +AV+GSR S Y R F Sbjct: 54 NYICYGDRAYPSSFYELDCPPFVIFYEGNLSFLNEQCIAVIGSRTPSEYALRMTEDFVGN 113 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 TI SGLA GID AH+AAL SIAV+G GL+ +P +H + ++ Sbjct: 114 -VREHYTIVSGLAYGIDITAHRAALDFQ--SIAVVGCGLDICYPSKHRVEFEFM-KKNHL 169 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++SE+P V P + FP RNR+I+ LS+ V V+ A +RSG++ T AL+ R V LP Sbjct: 170 VISEYPKGVHPHKHYFPFRNRLIAALSQSVYVMSAFVRSGTMHTVNEALKLNRRVICLPH 229 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEI 279 + + G + LI++GA ++T E++ Sbjct: 230 NLDDITGAGCNLLIQEGAEVLTNLEDL 256 >UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBU6_9FIRM Length = 242 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 11/248 (4%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 I ++ G Q L + + + + YP L Sbjct: 3 EQILCYAIRYHGEWHAIKQAILR------NEEWERCDYDGY-YVTIYDKEYPQCFLQLEY 55 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF G L AV+GSR + + + LA R I SGLA+GID Sbjct: 56 PPWILFYAGRLELCSLPSCAVIGSRMPTQRSIHITQQVVKQLADR-YVIVSGLAKGIDAG 114 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AH AA N +I V+G GL+ ++P+ +ARL A + +Q ++SE+P PLAY+FP R Sbjct: 115 AHTAA--CNKHTIGVIGCGLDVVYPKENARLYAYM-KQSQLILSEYPKGTKPLAYHFPWR 171 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NR+I+ LS ++V+EA RSG+L+T AL + ++ +P +P G + LI QGA Sbjct: 172 NRLIAALSDSIVVIEAKKRSGTLLTVNEALNLSKPIYCIPHAFADPAGYGCNLLISQGAN 231 Query: 272 LVTEPEEI 279 ++ + +I Sbjct: 232 ILVDETDI 239 >UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bacteroidales RepID=A6L5R8_BACV8 Length = 326 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 18/315 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWV--AKQSHIDAVVLQQTGLTLRQAQRFLSFP----R 57 TE+ L L + + + S I + L ++ Q Sbjct: 5 TEMILTLQQLDGIGNKTIFNQIAKYVTNTISQISQLCEFWITLKGKKIQAITEDDLYKAH 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD------YPGALFVEGELHALHSFQLA 111 + ++ N +I YP L + T+ P L+ +G L AL +A Sbjct: 65 DVALRIIERCKEENVGIISYYDSKYPEILKSCTNEDGKIDPPLILYYKGNLEALRKPGVA 124 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++G+R + G + G F A RG I SGLA G D H+ AL V G + A L NGL Sbjct: 125 IIGTREPTPNGIKAGLHFSREFAKRGYNIVSGLAIGCDATGHQGALSVGGTTTAFLANGL 184 Query: 172 NT--IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 + I+P+ + LA ++ GG L+SE+P+ Y+ R+R+ +GLS +V++ + Sbjct: 185 DWASIYPKENLSLAKEIVSNGGLLLSEYPVGQSCGRYSLVARDRLQAGLSYATIVIQTGI 244 Query: 230 RSGSLVTARCALEQGREVFALP----GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + G++ + + +FA+ + +G L+++G EI E Q Sbjct: 245 KGGTMHAVNATINSQKPLFAVEFKNNEDTISEKVQGNLKLVQEGQAHPLRSSEIDEAKQL 304 Query: 286 GLHWLPDAPENSFYS 300 ++ A +N S Sbjct: 305 IESYINKAKQNQQES 319 >UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clavibacter michiganensis RepID=B0REP0_CLAMS Length = 478 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 92/314 (29%), Positives = 139/314 (44%), Gaps = 24/314 (7%) Query: 71 NHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALH--SFQLAVVGSRAHSWYGERWGR 127 ++ +P P L+ G A+ S +A+VG+RA + YGE Sbjct: 162 GARVLVPGDPHWPVGADDLGPHSPLVLWCTGAPDAMAALSRSVAIVGARAATGYGEHVTA 221 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L R V + SG A GIDG AH+AA+ G ++A L G++ ++P HA L A + Sbjct: 222 ELAAGLVDRDVAVVSGGAYGIDGAAHRAAIGSAGRTVAFLAGGVDRLYPSGHAELFARM- 280 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 + GA+VSE P P + F RNR+I+ S +VVEA RSGSL TA A+ R + Sbjct: 281 RRDGAVVSELPCGASPTRWRFLLRNRLIAAASAATVVVEAGARSGSLNTANHAIALERPL 340 Query: 248 FALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYSPD---- 302 A+PGP+ + S G H L+++ A+ +T +++++ + E Sbjct: 341 GAVPGPVTSASSSGCHRLLRESQAVCITSADDVMDLVPGWSGAGTQVQEPGSAHASSRDT 400 Query: 303 --------------QQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELEL 347 + +L + VA RAG V E + L LEL Sbjct: 401 PSGAADDRVGARAAEDRGDSRVVRVLDALAVRRGRGTADVAARAGLGVAETSSVLGMLEL 460 Query: 348 AGWIAAVPGGYVRL 361 G +A GG+VR Sbjct: 461 EGTVARPDGGWVRR 474 >UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX97_9FIRM Length = 308 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 10/301 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL------S 54 M + I L L + Y + + H + H DA+ L LR+ Q+ S Sbjct: 11 MKEQLILLSLEGAN--YREIWYYLKHAIKSACHRDALQLADCQAMLREVQKEAGVLVNPS 68 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 F + +++ ++ + YP L P ++ G + L +++VG Sbjct: 69 FHFYLDDQHYVRIKELANYSLMIGERLYPSAWLEIPKPPLLVYFRGHIEWLQEPLISIVG 128 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNT 173 +RA S G+R + L G SG+A G+D + H+ AL G +IAVL G T Sbjct: 129 TRAISSQGQRDASSLTQALCQAGYVCVSGMALGVDAMVHRTALSCPGGKTIAVLPAGFGT 188 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +PR HA L L + L+SE+ + ++F RNR+++G++ ++VVEAALRSGS Sbjct: 189 CYPRSHASLMNELGQSN-LLLSEYQPHIGIKKHHFIMRNRLVAGIAPALVVVEAALRSGS 247 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA AL+ RE++ PG + + S G + LI+ GA + + + +L+ Sbjct: 248 LITANFALQYNREIYVCPGHLSDANSAGCNQLIEAGANAIYSLPDFMGDLETLYRLQAIK 307 Query: 294 P 294 Sbjct: 308 N 308 >UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWU9_9BACT Length = 292 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 117/240 (48%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + ++ + + L E+ ++ YP +L + P LFV G+ Sbjct: 51 ILADLSRPERDVLAERLLILLDKAERLGLKMMHPGHPDYPSRLGTLSAPPFFLFVRGDAT 110 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG+R + L+ G+ + SGLARG+D AH+ AL+ + Sbjct: 111 ILDRPLVAVVGAREAGRESLLEVTGLSKNLSEAGLVVVSGLARGVDAAAHRGALEAKRPT 170 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AV+G GL+ ++P + LA + GG ++SE+P P ++FP RNRI++GLS V+ Sbjct: 171 VAVVGTGLDRVYPPENVGLAREIERTGGLILSEYPPGSGPDGWHFPHRNRIVAGLSLAVI 230 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 RSG+ VTAR ALE+GRE+ EGP L +GA E++E L Sbjct: 231 AGPHRRRSGTYVTARIALEEGRELLVFDRGARGWECEGPALLEGEGAKRAGSAMEVMEAL 290 >UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AMD3_SYNSC Length = 338 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 119/294 (40%), Gaps = 19/294 (6%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELH----ALHSFQLAVVGSRAHSWYGERWGRLFC 130 + +P L P L+VEG+ +AVVG+R+ S +G Sbjct: 60 LLPGDPAWPSCLDQMHLPPSGLYVEGDRSLLRHINARTAIAVVGTRSASDHGLAMAEELG 119 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 LA G + SGLA G+D AH+ L NG I VLG L+ ++P H L + Q Sbjct: 120 RALAEAGWPVFSGLAEGVDAAAHRGCLARNGAPIGVLGTPLDRVYPAHHRSLQQQVGRQ- 178 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G LVS +F RNR + ++ ++VVE RSG+L++AR A V+ + Sbjct: 179 GLLVSPSRSGCRVRPGHFAARNRWLVAFAQALVVVECQQRSGALISARWASRMHYPVWVV 238 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPF 310 PG G + L++ GA + PE++L ++ ++ Sbjct: 239 PGDARRWSCRGSNALLRDGATALIHPEDLLASIG-------------EGPLRSEESRGKH 285 Query: 311 PELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 L+ +G D + E+ QLL LE + G + R R Sbjct: 286 QRLMEAIGSGA-TFDQLVLCLQCSPAELAPQLLALECRRELLCESGLHWRKPRP 338 >UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LR98_HALO1 Length = 297 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 129/292 (44%), Gaps = 21/292 (7%) Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLA 134 D YP +L A L V G + +AVVG RA + R F +A Sbjct: 10 PDDAAYPERLHALPPERPTLQVRGAIAPWARAARSIAVVGLRAATARDVERARGFGRDIA 69 Query: 135 TRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 G + SG A G+D AH+ AL+ GV+ VLG G++ ++P RH L + Sbjct: 70 ASGAAVISGGALGVDAAAHRGALEVAAQPGAGVTAVVLGCGIDVVYPARHRALYHEVCAS 129 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 GGAL+SEFP PP +F RRN I+ L+ VLVV A RSGSL TAR A + GR V A Sbjct: 130 GGALISEFPEAAPPRPGHFVRRNTTIAALADAVLVVAAGARSGSLHTARAARKLGRLVAA 189 Query: 250 LPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALP 309 +PG G L+ GA+ V EP + + L + A + AL Sbjct: 190 VPGTP------GCERLLADGAVAVREPNHLWDALAGRVRAPEVALPSPGSDAALVLAALD 243 Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L D +AERAG L+ LEL G A+PG Sbjct: 244 ARRGLD--------PDQLAERAGLSARACARALIGLELCGLAVAMPGQSYAR 287 >UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=A9WP58_RENSM Length = 323 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 95/320 (29%), Positives = 138/320 (43%), Gaps = 10/320 (3%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGELHALHSF-QLA 111 P+ + E L + L+ + +P L P L+ G +A Sbjct: 7 RLPQVAAERDLTTMASIGGGLLIPEDAAWPAGLKDLGLAAPIGLWFRGTSGLPALSDCVA 66 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV----SIAVL 167 VVGSR + YG LA R T+ SG A GID A++AAL +IAV+ Sbjct: 67 VVGSRDSTAYGNAVVADIAHGLAVRRKTVLSGGAYGIDAAANRAALTAKSAESVATIAVM 126 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GL+ +P + L + Q G L++E P P Y F +RNR+I+ LS +VVEA Sbjct: 127 AGGLDRFYPAGNELLLREI-SQSGLLLAEVPPGCNPTRYRFLQRNRLIAALSSATVVVEA 185 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFG 286 RSG+L TA A E GR V A+PG + + S G H L+++G A+ V++ EI E + Sbjct: 186 RWRSGALNTAHHAAEMGRHVAAVPGSVYSANSAGCHRLLREGAAVCVSDAAEICELISPS 245 Query: 287 LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P + L + L + V+ +A AG V L LE Sbjct: 246 GVLSPMHIPDRAEHDGLPAEDLLLLDALPV--RRGSSVEKLAGVAGLDEASVRAGLGRLE 303 Query: 347 LAGWIAAVPGGYVRLRRACH 366 L G++R R + Sbjct: 304 LLELAKRSENGWLRRRPSST 323 >UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID=C6WBB2_ACTMD Length = 314 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 11/291 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + L L + + + R A + + + +A + L Sbjct: 5 EEQLRLLALCKVKDVNWYLIAREAQRPGGVDRLWKALPLEASADATKAIKALKPLNGATD 64 Query: 58 ---KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ + + + + L+ + +PP L + P LFV G + +AVVG Sbjct: 65 EYIAMAQAEVDKVREDDVRLVTVLDDEFPPNLRLIPNAPPFLFVRGTMTDADLRSVAVVG 124 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S G + L RGVT+ SGLARGID AH A L+ G +IAV+G G+N Sbjct: 125 TRDASEAGRQRAGRMARELVERGVTVVSGLARGIDTAAHTATLKAGGRTIAVIGTGINRY 184 Query: 175 HPRRHARLAASLL-EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 P + L + + GA+VS+F D + FPRRN +SG+++G +V+EA SG+ Sbjct: 185 FPAENRVLTDKIATDGQGAVVSQFWPDASGATWTFPRRNITMSGIAQGTVVIEAGSTSGA 244 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENL 283 + AR ALE G++VF + E ++ +GA+ V + + + + L Sbjct: 245 KMQARVALEHGKKVFLIKS--LTEQQEWARKYVETRGAVQVEDVKAVADAL 293 >UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YIL5_EXIS2 Length = 275 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%) Query: 22 VRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 + A + V+++Q GL + + + +L L+Q +L+ Sbjct: 3 RELYARFATCRVPYSIVVLIEQYGLLPVEDLPVSRSIKNRYQQALQ-LDQVPTNLLVPGD 61 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 ++P LL LF G+ L ++++GSR S + F Sbjct: 62 PYFPMPLLQIPQPVYGLFFSGDPSLLRQPMISIIGSRQPSPSHSKRLS-FLRPFFESPFV 120 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 SG A GID + H+ +L+ + +IAVL +G + ++P RHA L + +Q G L+SE+P Sbjct: 121 TVSGGALGIDSLVHRLSLKHHQATIAVLASGFDFLYPARHAPLFQRI-QQDGLLLSEYPA 179 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 P + F RNRIISGL+ G+++VEA +SG++ TA ALEQG++V+ +PG Sbjct: 180 PTPVKKHQFLERNRIISGLASGLIIVEATRKSGTMNTAGHALEQGKDVYCIPGCPTEKHF 239 Query: 260 EGPHWLIKQGAILVTEPEEI 279 +G + LI +GAI + PEE+ Sbjct: 240 QGTNQLIAEGAIPLLNPEEV 259 >UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8E5_9CLOT Length = 304 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 20/294 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPR- 57 M ++ L L I + + K + ++ + + ++ P Sbjct: 1 MNNS---LILTVIDLIGKRKTENLIEKGFFNKSTELNEKEILECIERYKERDSAFKVPSL 57 Query: 58 -------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQ 109 ++ E L + I ++ +P +L D +F +G L+ L Sbjct: 58 DKIKATMENSEQILLKSRELGIKCISIFNDNFPDKLKNIKDKSILIFYKGNLNCLYEDKS 117 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+R + G++ G E A G + SGLA G D H+ L + G ++A L Sbjct: 118 IAIIGTRTPTERGKKIGEALGEYYAKEGFIVVSGLASGCDTYGHRGCLNMKGQTVATLPC 177 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ +P + L +LE G L+SE+ + P F +R+R+ + LS GV+VVE A+ Sbjct: 178 GLDKYYPPENCDLGDEILENEGCLISEYKIGTNPSKIRFIQRDRLQAALSLGVVVVECAI 237 Query: 230 RSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQG-AILVTEPEE 278 G++ T + A + +++ A+ + +G +LI+ AI ++ E+ Sbjct: 238 ECGTMHTVKFAQKYNKKL-AVSLHDEVNLDIETIKGNLYLIENSDAIGLSNIED 290 >UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BF27 Length = 378 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 100/353 (28%), Positives = 155/353 (43%), Gaps = 21/353 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + W L + +VR+ + + + GL + R + Sbjct: 1 MDEIHAWAYLNRVVEATHPQIVRLVTEFGPVEVAERIKAR-AGLPEGLLN--TTQARADV 57 Query: 61 ES---SLCWLEQPNHHLIPADSEFYPPQLLAT----------TDYPGALFVEG-ELHALH 106 + L LI +P +LL+ P AL+V G +L + Sbjct: 58 DQSGHDLESAAAMGWRLIYPGHPEWPGELLSCFTTLEVRDRADAPPLALWVRGRDLREML 117 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 S +A+VG+R S YG + F A GV + SG A GID AH+AAL G ++ V Sbjct: 118 SEAVAIVGTRMASSYGTQVAAQFAGQFANAGVGVISGGALGIDAAAHRAALDAGGTTVVV 177 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G+ +PR HA L + E+ GALV+E+P V P + F RNR+++ LS+ +VE Sbjct: 178 GAGGVGVDYPRTHAELFDRIAER-GALVTEYPPGVRPARHRFLTRNRLVAALSRATTIVE 236 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 A RSG+ TA A+ + + A+PGP+ + G H LI+ G A+LV + + + Sbjct: 237 AGWRSGARNTAHWAVRLNKPLGAVPGPVTLQTTSGCHDLIRSGEAVLVCSADNVRSLYRS 296 Query: 286 GLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVP 336 DA E + Q ++ + ++ E TPV VA +AG V Sbjct: 297 VGTVNEDAQLELLWEKSAVQKLSRNELAVFDSLNSAEPTPVGEVAAQAGLAVA 349 >UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=Q1MY05_9GAMM Length = 314 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 19/311 (6%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL 53 M E W L L +I + + +IA I ++ + + + Sbjct: 1 MHSKEYWKNETIAFLALANIKGVGFRTLQKIASNGLGFKSILKSDSKEE--LQKHIKAKI 58 Query: 54 SFPRKSIESSLCWLEQ----------PNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + + L + LI + E YPP L D P LFV+G L Sbjct: 59 DPNKSWHDFQLEAWAKGIELARELSAQQTRLIFLNEECYPPLLKKIPDPPYWLFVQGNLD 118 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 +L+ +A+VG+R + G + +A++ TI SGLA GID AHKAAL+ N + Sbjct: 119 SLNEKPVAIVGTRKPNEDGILLTSIAVAGIASKNRTIISGLADGIDQTAHKAALKYNLKT 178 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVLGNGL+ +P +L + ++ GGA+V+E+ + A NF +RNRI +GLS+ ++ Sbjct: 179 VAVLGNGLSIDYPAGSEKLKSEIINSGGAIVTEYLPNQTYSAENFVKRNRIQAGLSETII 238 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + + SG+ T A++ R++ L P G ++I + P E E L Sbjct: 239 PAQWKVNSGTGHTVNFAIKYDRKIAGLKLPNQFHGCSENEYIISANGQVFELPIETREFL 298 Query: 284 QFGLHWLPDAP 294 + Sbjct: 299 HYLDQPRQPIQ 309 >UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L612_EXISA Length = 264 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 129/244 (52%), Gaps = 4/244 (1%) Query: 43 GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 G +F + E + E H + + + +P +LL + P LF G+L Sbjct: 24 GTLGAHRTQFSEHVWRRAERAFQASESYK-HFVTWEEDLFPKRLLDIPNPPYCLFYHGDL 82 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L A+VGSR + + + +L SG A GIDG+ H AL+ + Sbjct: 83 EVLQERTTAMVGSRELNRISQSLVNHY-HSLIEE-TVSVSGGALGIDGLVHAHALRTHRP 140 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AVLG GL+ ++P + + + Q G L+SE+ + P + F RNR++SGL + Sbjct: 141 TVAVLGAGLDRLYPAANRDMLLQIP-QEGVLLSEYVPNTPIQKFQFLERNRLVSGLGDAL 199 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 +V++A +SG++ T ALEQG+ VFA+PG +P +EGP+ LI++GAI +T ++I+ + Sbjct: 200 VVIQARRKSGTMNTVGHALEQGKTVFAVPGSPLDPLAEGPNRLIEEGAIPLTNSDQIIRD 259 Query: 283 LQFG 286 L+ Sbjct: 260 LKIV 263 >UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O67250_AQUAE Length = 327 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 145/362 (40%), Gaps = 47/362 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF---LSFPRK 58 D +++RL + + + +I + +++ L++ L ++A+R L R Sbjct: 8 EDLVLYVRLADTNGVGLKSVKKILYHFKSIRNLNEKELERL-LGTKRAERVVLSLETERN 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E + +++ + I + + YP L + P LF +GE +VG+R Sbjct: 67 FEEKLINIIDKNDIKFILYEDKEYPEILKGIDEPPPYLFYQGEPP---EGGYGIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S E++ I SG A GID AH +L+ + +LG G+ I R Sbjct: 124 SKLSLNAVEKLLESIEG---PIISGGAVGIDFKAHFESLKHGFKNFVILGTGILKIESR- 179 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 L G +LVSEF + FP+RNRII+GLSK + V+EA +SG+L+TA Sbjct: 180 ----IKKLKGMGASLVSEFLPWTEGSKWTFPKRNRIIAGLSKKLFVMEAGSKSGALITAD 235 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A GRE++A G + +G LI++G Sbjct: 236 YAHRYGREIYAYVGDEHSERWKGCLKLIEEG----------------------------- 266 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D + +LL + D V + EV L L + G + G Y Sbjct: 267 -KAKRLDFSSEKDKLLEFLS-VPRTFDEVISFLKRERKEVFKILSSLIIQGKVVQE-GAY 323 Query: 359 VR 360 + Sbjct: 324 YK 325 >UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZK2_CLOB6 Length = 385 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 7/275 (2%) Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQL 110 + ++ L ++ + +S FYP L + P L+++G + L + Sbjct: 62 LIENSLNKAKNILKINKELRIRTVLINSRFYPGNLKKMDNAPAILYIKGKNITKLDEKAV 121 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A VG+R + +G + +LA +I SGLA GID +HKA L V G +IA+L +G Sbjct: 122 ACVGTRTPTIFGIKAANSIVGSLAKENFSIISGLALGIDAESHKACLNVGGRTIAILAHG 181 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ I+PR + L+ S+L GG L+SE+P+ P + F RNRI+SGLSKG +V E + Sbjct: 182 LDMIYPRENIELSKSILNNGGTLISEYPVGTKPDKFRFVDRNRIVSGLSKGTIVFETKEK 241 Query: 231 SGSLVTARCALEQGREVFALPGPIGNP-GSEGPHWLIKQGAILVTEPEE----ILENLQF 285 SG++ T L+Q ++VF P P+ + G L+ + + + ++ I+ L + Sbjct: 242 SGTMHTVDYTLKQQKKVFC-PIPLKQELQTSGLIKLLNENKAIGIKTKDNYDVIVHELGY 300 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 + + A + + + L L V + Sbjct: 301 KIKYDTKAIIKNKSENINKLITLDNNILNDIVSTD 335 >UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976538 Length = 504 Score = 227 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 122/289 (42%), Gaps = 18/289 (6%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLAT-----TDYPGALFVEGE 101 QR + P + W +I ++P +L P L+ G+ Sbjct: 99 WQQRLRTLPTWDRDYLCGWFTMEGRQWIIAPHDVWWPTRLNDLALLGRCAPPLCLWGSGD 158 Query: 102 LH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + +VGSR + YG R A G + SG A G+D AH+ AL Sbjct: 159 RAALTSCPQPVGIVGSRGVNEYGRRLTTDIAVHAAQAGHLVVSGGAMGVDAAAHRGALDA 218 Query: 160 --------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 G ++AV GLN P+ ++ L + E GGALVSE P A F R Sbjct: 219 MRAYGIGRAGRTVAVFAGGLNHAGPQCNSELFDGIAENGGALVSELCPGTIPEARRFLSR 278 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-A 270 NRII+ LS ++V +A LRSG+L T E R++ A+PG I PG+ G + LI++ A Sbjct: 279 NRIIAALSSTLVVTQARLRSGALNTVNWGSELQRDIHAVPGNIDMPGNGGCNRLIQEQRA 338 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 +V + ++++ H + + D D + P + D Sbjct: 339 TIVCSVAD-MDDVWHAPHPPESFHDVATQRKDGSDCDVGTPRDAGILRD 386 >UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX4_9FIRM Length = 241 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 5/208 (2%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I YP + P LF G + L ++ +VGSR S GE + + C L Sbjct: 39 YITYLDPEYPEEFRHLEYPPWVLFYRGNVAILEKRKVTIVGSRKISERGEYYTKQVCAKL 98 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 + + SGLA+G+D + H++ L+ G++IAV+G+GL +PR + +L L + + Sbjct: 99 -KKDFVLVSGLAKGVDAMVHQSCLED-GLTIAVIGSGLEVHYPRCNEKLYQQ-LSRNHLI 155 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V +FP RNR+++ L + ++V +A RSG+++T + AL+ G++V+ LP P Sbjct: 156 LSEWPGYVGVQKVHFPWRNRLLAALGEKIIVTQAKSRSGTMITVQEALQLGKDVYCLPYP 215 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILE 281 + G + LI++GA L EE+ E Sbjct: 216 LDEIEGSGCNQLIQEGASLY--IEEVFE 241 >UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRS5_9ACTO Length = 310 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 10/242 (4%) Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP-----GALFVEGE--LHALHSFQ 109 R L + +I + +PP+L P L++ G L Sbjct: 65 RAVATEQLERSREAGARIIVPGDQEWPPRLGDLARVPDAVVPWCLWLRGPAPLAQTTEQS 124 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG-VSIAVLG 168 +A+VG+R + YG +A+ G + SG A GID AH+A L +IAV+ Sbjct: 125 VAIVGARCCTPYGHTVASELAFQVASSGWAVASGGAYGIDVAAHRAVLAAEAAPTIAVVA 184 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ +P H + + Q G +VS+FP+ P + F RN++++ L++G +VVEAA Sbjct: 185 CGVDQYYPSGHREVFDRI-AQTGLIVSQFPVGFAPQRHRFLTRNQVLAALTRGTVVVEAA 243 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGL 287 RSG+ A GR V +PGP+ + S G H +++ A +VT E+L++L + Sbjct: 244 ARSGAKHCLGQAAAMGRYVAGVPGPVTSAYSRGVHQVLRDQHARVVTSGVELLDDLASVV 303 Query: 288 HW 289 Sbjct: 304 GD 305 >UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB84_BRAFD Length = 428 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 96/351 (27%), Positives = 156/351 (44%), Gaps = 26/351 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVV-------------LQQTGLTLRQAQRFLSF 55 L+ ++L + + + + + R +R+ S Sbjct: 56 ALLLRAALGPAAALELVDA-GTEETLLQALDGHVPRDTAEPAGSSSRARAARALERWRSR 114 Query: 56 P-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALHS---FQL 110 R ++ + ++ +P L P L+V G + Sbjct: 115 RARIDVDRVRADAARRGIRILIPQDPQWPALLNDLQHTAPHCLWVHGPGDLASLTGARTV 174 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGN 169 A+VGSRA + YGE A G T+ SG A GID AH+ AL +G ++AVL Sbjct: 175 ALVGSRASTPYGEDTAASLAAAFAAGGGTVVSGGAYGIDAAAHRGALAAEDGATLAVLAG 234 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL++++PR +++L + + LVSE P P + F RNR+I+ LS+ +VVEA+ Sbjct: 235 GLDSLYPRGNSQLLERIRARH-LLVSEAPPGTAPTRWRFLARNRLIAALSQATVVVEASW 293 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLH 288 RSG+L TAR A + R V A+PGP+ + S G H L+++ GA+L+TEP ++L+ L G Sbjct: 294 RSGALSTARLADQLSRPVGAVPGPVTSAASAGSHRLLRERGAVLITEPADVLDLLPGGPA 353 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD-VVAERAGQPVPEV 338 + + ++ +L V + + VAE G V EV Sbjct: 354 AGEGSH---AVQDELDLLSPSDRRVLDAVPPRSSIAEHRVAEEIGFSVAEV 401 >UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR Length = 335 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 24/334 (7%) Query: 1 MVDT-EIW-------LRLMSISSLYGDDMVRIAHWVAKQSHIDA-------------VVL 39 M + E W L S+ + + +IA + + Sbjct: 1 MTEEHEYWRAETVAFYALQSLHGVGFRTLYKIAAQKISFRELIRCDEPSMFSSTLRTKLP 60 Query: 40 QQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVE 99 + +F S + ++ + YP +L +D P LFV+ Sbjct: 61 TSVTESAESWDKFKKELWAKGTSMARINASKDIKVVFYGQDAYPERLKHISDPPMWLFVQ 120 Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L LH+ +A+VGSR S G +L +A G+ SGLA GID AH +++ Sbjct: 121 GALSNLHTQSVAIVGSRKSSDDGHWLTKLIVAGMANTGLVSVSGLADGIDQKAHIESIRF 180 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 N ++AVLG G+++ +P+ + +L GG +V+E+ + +NF +RNRI +GL+ Sbjct: 181 NVPTVAVLGTGIDSNYPKGSEVVREQILAGGGTIVTEYLIGQSYSGHNFVQRNRIQAGLA 240 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+ VE ++SG+ T A + R + P NP S+ + +V Sbjct: 241 TCVIPVEWKIKSGTAHTVNFAKDFNRYLVMPYLPDANPESDELKAISSYKHGVVFNVPAQ 300 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVALPFPEL 313 E L + +L + D+ ++ Sbjct: 301 TEEL---ITFLKEPSTQESIESPDSDLNDGERQI 331 >UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLE2_FIBSS Length = 290 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 88/275 (32%), Positives = 129/275 (46%), Gaps = 4/275 (1%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 E YP L A+ P LF G L + +A+VG+R S E R +L Sbjct: 8 ENYPLALGASKYSPKQLFCIGTLPSTDKIGIAMVGTRRPSASAEELCRRLIGSLKATNAV 67 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 + SGLA+GID H+AAL +IAVL GL T LA +L+ GGAL+SE+ Sbjct: 68 VISGLAQGIDSFCHRAALDAGIPTIAVLAQGLGTKIEGERGILAKRILDAGGALLSEYEG 127 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 D P NF RNRIISGLS+ LVV++ + G+L+TA+ L++G+++ A PG Sbjct: 128 DTPAYKGNFIARNRIISGLSQSTLVVQSRKKGGALLTAQFCLDEGKQLLACPGNFDCELY 187 Query: 260 EGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G + L+ G A V PE + L + + Y D A ++ Sbjct: 188 SGTNTLLDSGHAKAVFIPESLRAVAGIPLLEGAKMEQLTTYGVQLSDGA---QKIFERFN 244 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + PE++ L ELE++G + + Sbjct: 245 GFRKTFSELQQEFDFKPPELLAILTELEISGLVTS 279 >UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V888_VIBAL Length = 329 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 113/247 (45%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 TE L + + + +A V + ++ + Sbjct: 6 TESLLAYRYLKGVGKKYLNELAISVETTKQSIDSCFESGRFGGVFSKEDIEEAFSKAREQ 65 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + H +I YP L A +D P LF G +H L + V+G+R + +G Sbjct: 66 IDISTSFGHFIISRLDPEYPQSLKAVSDAPPILFCSGNIHLLKKECITVIGTREPTEHGV 125 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + G I SGLA+G+D +AH++ L+ G +IAVL +GL ++P ++ LA Sbjct: 126 VIADRVTQWFSDNGWVIASGLAKGVDTIAHESCLRAGGETIAVLAHGLEKVYPAQNKELA 185 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + +++ G L++E+ + NF R+RI + L+K V++V++ L GSL +R +E Sbjct: 186 SEIVKSNGLLITEYNYNSFVGRSNFVERDRIQAALAKAVVLVQSDLVGGSLHASRAIIEY 245 Query: 244 GREVFAL 250 GR + + Sbjct: 246 GRFLVVV 252 >UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N822_SLAHD Length = 231 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 103/203 (50%), Gaps = 1/203 (0%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 +I D E YP +LL D P L V G+ L LAVVG+R S YG + Sbjct: 9 VIARDDERYPHRLLDLPDPPRELHVMGDPGILEMPSLAVVGARKCSPYGMDVAVHIADVA 68 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 A G+ +G A G+ A + L I VLG+GL+ +P + L +++ GG + Sbjct: 69 ADEGMATVTGGAVGVPTGAMRGTLAAEAFGIVVLGSGLDNPYPSDNIDLFQAIVGGGGCV 128 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 V+E+ +PP Y F RNR+I+ LS V+VVE + SGS A+ GR VFA PGP Sbjct: 129 VTEYYDQMPPRPYMFRERNRLIAALSSAVVVVECGMPSGSFSLCDTAMSLGRPVFAFPGP 188 Query: 254 IGNPGSEGPHWLIKQG-AILVTE 275 I + S G + LI G A V + Sbjct: 189 ITSHASTGCNVLIANGQASCVDD 211 >UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAA0_9FIRM Length = 336 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 1/236 (0%) Query: 70 PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 + L+ + Y L T + P LF++G +H L + VVGSR S + Sbjct: 102 NDVILVKKGDQAYSKLLATTKEAPPYLFLKGNVHLLEEKSVCVVGSRNASEESLKKTERI 161 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 ++L R + + +GLARGID H AAL G +I V+G +N +P+ + L + E+ Sbjct: 162 VKSLVKRNIVVNAGLARGIDTATHTAALANGGRTIVVIGTPINQYYPKENKDLQIQI-EK 220 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G +VS+FP P +NFP RN ++SG+S ++++A SG+L A AL+QGR+V Sbjct: 221 NGLVVSQFPPCNPINRWNFPTRNGVMSGISLATIIMKAGESSGALKQADYALKQGRDVLI 280 Query: 250 LPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 I NP + P I +GA +E+L+ L L + S + D Sbjct: 281 PQSAIDNPLIQWPKTYISKGAHAFKTLKEVLQILNRNELLLNMLDNDMKVSTVEMD 336 >UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1ACU7_ECOK1 Length = 349 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 14/310 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-----DAVVLQQTG---------LTLR 47 ++ L L I + + ++A + I A G L Sbjct: 33 TESAALLALSEIHGVSYWTLYKVAQKGIRFRDIVTSQTLANFEYLLGVKLHRQPYYLNEG 92 Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 F + + L + +I S YP +L ++ P LF +G + L Sbjct: 93 NWSVFRDSMISTAKILLTHYHNSGYKIIHHGSPSYPDKLNDLSEPPFWLFAQGNVSLLDK 152 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + VVG+R + G + + SGLA GID AH+A+L +IAVL Sbjct: 153 KCVGVVGTRNPTALGIYLTQAVISQFIDSDYSTVSGLAYGIDQSAHEASLLFKIPTIAVL 212 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G G+N+ +P+ + ++ GG +++E+ + P NF RRNRI + LS ++ VE Sbjct: 213 GTGVNSNYPKNSGEMRGHIVNNGGLILTEYLPNQKPSQENFVRRNRIQAALSDVLIPVEW 272 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 L+SG+ T R A + R + P E H L + A ++ P +++Q + Sbjct: 273 GLKSGTSHTVRYAAQLKRAILCPLLRGTTPQEEIKHALSEYSATIMNIPLSDFKDVQSLI 332 Query: 288 HWLPDAPENS 297 Sbjct: 333 KSASGVKTQQ 342 >UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus RepID=B0RJ66_CLAMS Length = 317 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 26/308 (8%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ--------TGLTLR------- 47 + + I + + + + + AVV Q Sbjct: 10 ERFARVVWTHIGAPGDTVAGSLVQHLGATTALTAVVEQWPLRLMRSALEDGEEPGPVLDL 69 Query: 48 --QAQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG 100 A + ++ + + SL + ++ +P L + P AL+V G Sbjct: 70 HALAAQLRAWRERFIVDDVFRSLRTAAECGATVLIPSDPQWPRGLADLGPEMPYALWVRG 129 Query: 101 ELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + LAV+G+RA + YG L G+ I + + GIDG A +AA+ Sbjct: 130 HTDRMIRLERSLAVIGARAATVYGSAVTSESVSELVREGIAIVNSGSFGIDGAALRAAVG 189 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 G + AV+ +G++ +P HA L ++E GA+V+E P P ++F RNRI++ L Sbjct: 190 STGSAFAVISSGVDVTYPHAHAELFEDVIET-GAVVTERPPHTAPSRWSFLSRNRILAAL 248 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPE 277 S G +++E + RSG+L+TA+ AL+ GR V A+PG + +P + G +I+ GA LVT E Sbjct: 249 SSGTVLMEGSHRSGALLTAQRALQLGRPVGAVPGQVDSPSAGGCLTMIRDHGATLVTGHE 308 Query: 278 EILENLQF 285 ++ L Sbjct: 309 DMSRLLPP 316 >UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacteria RepID=Q2BRM6_9GAMM Length = 325 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 28/328 (8%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHID-----AVVLQQTGLTLRQ 48 M + + W L L + + + +++ I + G+ ++ Sbjct: 1 MTNQDYWRNETVAFLALSELKGVGYWTLYKLSCKNISFKKILKEYTKEELESLLGIKIKL 60 Query: 49 -----AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 F +S +L L +I D + +P L D P LFV+G+L Sbjct: 61 PSDTGWDEFCIALWESGIEALRSLHAQKVLMIFHDQDSFPESLKDLADGPRWLFVQGKLE 120 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG+R + G + F L+ + SGLA GID + H +L+ + Sbjct: 121 NLSKKSVAVVGTRKPTDDGVFLTKYFVAALSEHSLLTVSGLAYGIDQITHLESLRYGIPT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVLG G+ +P+ + ++ +GG +VSE+ + NF RRNRI + LS V+ Sbjct: 181 VAVLGTGILQNYPKGSEEIRLRIVSEGGTIVSEYLPNQSYSGENFVRRNRIQAALSTFVV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-----KQGAILVTEPEE 278 VE ++SG+ T A R++ I P + G + K AI V P+E Sbjct: 241 PVEWKIKSGTAHTVEFANRYQRKII----NIFLPSTYGLREELSFSESKYNAISVEIPKE 296 Query: 279 --ILENLQFGLHWLPDAPENSFYSPDQQ 304 +L++L G H + + + + Sbjct: 297 HAVLKDLLQGDHASSQKLLSGGHQTELE 324 >UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:H6 str. E2348/69 RepID=B7UMR1_ECO27 Length = 319 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 9/263 (3%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 + + L LIP SEFYP L T + P L+++G+ L Sbjct: 53 LKDKISETDFLIANAELENHHVNGVELIPYGSEFYPLSLAFTPNPPSILYIKGDKSILKE 112 Query: 108 -FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +A+VGSR S GE R + + G + SGLA G D AHKA LQ G +IAV Sbjct: 113 LPGVAIVGSRDTSPAGEEITRRITNQIVSAGYIVVSGLAIGTDANAHKATLQAKGKTIAV 172 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L +GL P++++RLA +L++GGA +SE+P+ P +F +RNRI GLS G +++E Sbjct: 173 LAHGLEEAKPKQNSRLAQEILDKGGAWISEYPMGRPAQKQSFVQRNRIQVGLSAGSILIE 232 Query: 227 AALRSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQGAILV----TEPEE 278 AAL SG++ A A + R VFA+ P N EG L+K + ++ Sbjct: 233 AALNSGTITQAEFANKAKRPVFAVVPHLPNNPLNLNCEGTVDLVKSNMARALKTKRDYDD 292 Query: 279 ILENLQFGLHWLPDAPENSFYSP 301 ++ + +L + S Sbjct: 293 VIMIINESREYLLELKWPGKQST 315 >UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G684_NOVAD Length = 345 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 8/257 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--------LTLRQAQRFL 53 + +L L ++ + + +A S + + ++ R R Sbjct: 31 DEERAFLALATVRGIGQKTLFAMADDKRSFSDALEYGPEASNPAGSDGKAISERHWSRVR 90 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + + LE L+ S +P LL P LFV+G + L +AVV Sbjct: 91 GHALEQGDRLAEHLEALGIGLLFRGSPGFPSALLDLERPPHWLFVQGSVERLAEPSIAVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S G R L GV SGLA GID +AH+ +L+ +IAVLG G+ Sbjct: 151 GTRKPSADGFFLSRYVGACLGEWGVPTVSGLAAGIDQLAHEHSLRAGVPTIAVLGTGMLE 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P+ RL +L GGA+VSE+ A NF +RNR+ + L + ++ E RSG+ Sbjct: 211 DYPKGSGRLRDHILATGGAIVSEYLPTASYSAENFVQRNRLQAALGRILIPAEWNRRSGT 270 Query: 234 LVTARCALEQGREVFAL 250 T R A GR + L Sbjct: 271 AHTVRFATALGRPIACL 287 >UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirillum sp. Group II RepID=B6AM77_9BACT Length = 306 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 82/232 (35%), Positives = 118/232 (50%), Gaps = 2/232 (0%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + R+ L ++ +I D YP LL D P LF G L +A+ Sbjct: 64 MEIFREKAVRVLDKAKRQGIMMIAIDEPAYPEILLRLPDPPLVLFFRGVLPG--RPGIAM 121 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + R L+ G+ I SGLA G+D AH+ AL G ++AV+G GL+ Sbjct: 122 VGTRRPTVEARRGFESLAAGLSRFGLPIVSGLAAGLDAAAHRGALLGKGTTVAVVGTGLD 181 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P H LA +L GG +VSEFP PP ++FP RNRI+ GLS G++ SG Sbjct: 182 RVYPDFHRTLAGEILSGGGCIVSEFPPGSPPDGWHFPFRNRIVVGLSAGIVAGPHRRASG 241 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 + VT R AL +GR+V +EGP L++QGA V+ E+++ L Sbjct: 242 TSVTVRRALGEGRDVVVYDRGGFGETTEGPEALLEQGARRVSSAEDVILALG 293 >UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVJ4_9SYNE Length = 293 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 16/269 (5%) Query: 23 RIAHWVAKQS-HIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEF 81 ++A A + + +V+ ++ + + L + + Sbjct: 34 KLAKLFASFNHELPSVIAREQNASPGIIKAVKC-------KIADLLPFRSFSALFYGDFE 86 Query: 82 YPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTIT 141 YP L + L+ +G L L S ++VVGSR + G R R L T+ Sbjct: 87 YPTTLRDAKNPIEVLYYQGNLDLLSSKAVSVVGSRKPTDEGRRRARKIARLLVASDFTVM 146 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL-- 199 SGLA GID AH+AA++ G +I+V+G LN ++P+ +A L + + LV++ P Sbjct: 147 SGLATGIDTEAHRAAIEAGGRTISVIGTALNEVYPKENAELQRKI-SKEFLLVTQVPFYQ 205 Query: 200 ----DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 D FP RN+ +S LS+ ++VEA+ SG+L+ AR AL+QGR++F L Sbjct: 206 YSMQDYRRNRGFFPERNKTMSALSQATIIVEASETSGTLIQARAALQQGRKLFILKSC-F 264 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQ 284 + G E P +K+GAI + + E+LE L+ Sbjct: 265 DRGLEWPERFLKRGAIKIEDGSEVLEQLR 293 >UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_RHOFA Length = 293 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 9/288 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + W L ++ +V +A ++ V + S+ E Sbjct: 4 RERVAWAYLAHVAR-GQGSLVHLAVSLSGVEAAAEAVRHREVSEDLLRATARSWDYSGAE 62 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDY----PGALFVEGE--LHALHSFQLAVVGS 115 + L L+ +P +L P AL+V G+ L +A+ G+ Sbjct: 63 ADLETAATLGARLVTPADAEWPQRLRMAGWLEGSTPVALWVRGQGALPGADVSAVALTGT 122 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 RA + YGE F LA RGV + SG GI+G +AAL V +AV+ GL+ + Sbjct: 123 RAATAYGEHVASEFAGDLAMRGVAVLSGSGFGIEGAVLRAALGVGAGPVAVMPCGLDRAY 182 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P HARL + EQ G +VSE+ P F +++ LS V+V EA R +L Sbjct: 183 PSGHARLLERVAEQ-GVVVSEYSFGAEPRRERFNGSGALLAALSDAVVVPEAGSRGRALS 241 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILEN 282 AR GR V+A+PGP+ + S G H LI G A L + + Sbjct: 242 VAREVHRLGRAVYAVPGPVTSAASNGCHTLIIDGVARLAMSAAGVCAD 289 >UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GA6_9NOCA Length = 301 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 16/300 (5%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWV---AKQSHIDAV-VLQQTGLTLRQAQRFLSF 55 M + + L+ + + V + Q R + + Sbjct: 1 MDAERIALVALLRL-RPQKLTWSALTEKVLDAGSARIVFDDYFPPQLIDDPRVSAAWA-- 57 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 E+ L + +P +L P LF +G L +VVGS Sbjct: 58 ---QAEADLQTWHDEGLEFLSVLDPMFPRRLHDIMQTPPFLFAQGHL-VPDDQGFSVVGS 113 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S GE + R LA G+T+ SG+A GID AH+AAL V G ++A + G+N + Sbjct: 114 RKASPEGEGFAREIATYLAGEGLTVVSGMAAGIDTAAHQAALAVGGRTVAFVATGVNRTY 173 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P ++ L S+ + G ++S+F D PP + F RN ++SG ++VEA SG+ Sbjct: 174 PAQNRHLHESIAD-LGLVLSQFWPDAPPQKHTFLMRNALMSGYGLASIIVEAGETSGARA 232 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 AR A+E GR V + + LI+Q G L T+ +I + Sbjct: 233 QARMAVEHGRPVILTESVV--ARNHWAKTLIQQRGVHLATDMTDIDRLVTQIREEPARVD 290 >UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_NITWN Length = 302 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 12/267 (4%) Query: 26 HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW-LEQPNHHLIPADSEFYPP 84 + + + + R S+ ++ + A YP Sbjct: 33 ASFKSIADLFSKQEGAVPSDFVERSRASSYANDVHARLKDAGIKSYGVRVHGAGD--YPE 90 Query: 85 QLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 +L L+ +G ++S +AVVG+R S G R ++L TI SG Sbjct: 91 RLRVADHPIELLYFQGWWELVNSPRSVAVVGTRKPSAEGLARTRRLVKSLLQDDFTIVSG 150 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 LA G+D AH AA+++ G +IAVLG L+ +P +A+L + E L+S+ P+ Sbjct: 151 LAAGVDTAAHTAAIELGGRTIAVLGTPLSKSYPASNAKLQQQIAEHH-LLISQVPVKRYS 209 Query: 204 LAYN-------FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 N FP RN +S L+ ++VEA SG+LV AR AL+QGR+VF L N Sbjct: 210 NQKNPTSNNFFFPERNITMSALTDATIIVEAGETSGTLVQARHALKQGRKVFILESNFRN 269 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENL 283 P + PH ++GAI V + ++I ++ Sbjct: 270 PELKWPHTFEERGAIRVADYDDIRRHI 296 >UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=A2CBT1_PROM3 Length = 378 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 97/373 (26%), Positives = 154/373 (41%), Gaps = 15/373 (4%) Query: 3 DTEIWLRL-MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI- 60 + W L + M + A + LR+ + + K + Sbjct: 8 ERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLG 67 Query: 61 --ESSLCWLEQPNH--HLIPADSEFYPPQLLATTDYPGALFVEGELHA----LHSFQLAV 112 S + ++ +P L A P ALF +G +A+ Sbjct: 68 LHRSKWGTCPSVDVPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAI 127 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S +G R LA G + SGLA GID AH+ L+ G + VLG L Sbjct: 128 VGTRRPSNHGLRVAEALGRALALAGWPVISGLAEGIDAAAHRGCLEGGGAPVGVLGTPLQ 187 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++PR++ L +L+ G LV+E P + F RNR++ L+K V+VVE RSG Sbjct: 188 KVYPRQNEGL-QALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVECPERSG 246 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ---FGLHW 289 +L+TAR A+EQ ++ +PG + G + L+ A + PE +++ L +H Sbjct: 247 ALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHS 306 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 A + S + LL +GD ++ + + QLL+LEL G Sbjct: 307 PSVAFDLSGSRSSSRAGQHGDTALLQAIGDGA-SLEDLMTGLNLSSARLTEQLLQLELKG 365 Query: 350 WIAAVPGGYVRLR 362 + A PG + RL Sbjct: 366 VVVAEPGLHWRLA 378 >UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH66_SEBTE Length = 234 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 4/233 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 W+ L + +++ L + L Sbjct: 3 WINLREF-GIKDSLILKFMKEFKSFESFIRD-ENLRILDRDIRAKVLLAALHDNRKFYEK 60 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L++ N L+ S+ YP L D P L+V G++ + VVG+R ++ YG+ Sbjct: 61 LQESNIRLLEYTSDDYPENLRNIQDPPLFLYVAGKIKFG-ERNIGVVGTRRNTIYGKVSC 119 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + L V I SGLA GID +AH+ L+ N I V+G+GL+ I P +L + Sbjct: 120 ESILKELLEYDVNIVSGLALGIDTIAHEFTLKKNCCCIGVVGSGLDKIFPYESRKLWERI 179 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 E G L+SE+P PL +NFPRRNRII+GLS+G+L+ E+ + G LV +R Sbjct: 180 PE-NGMLISEYPPGSEPLKWNFPRRNRIIAGLSQGILLCESYEKGGGLVNSRF 231 >UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCN7_LEPBA Length = 308 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 10/258 (3%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 +I ++ + + +R+L + PN L+ Sbjct: 16 RKTKIWRSYNSFPNLYNDLPKF--FVKEDWERWLFEC-----QIWEKNKDPNWQLVHFYD 68 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR-GV 138 E YP L D P L G+L +A+VG+R S + ++LA + + Sbjct: 69 ESYPQLLKEIYDPPLVLVCLGDLSVFQRELVAIVGTRKSSPISLVATKALVQSLAKKEKM 128 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL-EQGGALVSEF 197 I SGLA GID A +AL + + VLG L +P + L + + L+SEF Sbjct: 129 AIVSGLALGIDRQAFVSALDLGVPVLGVLGTTLGMEYPPGNRDLYKRIKSDTKQLLISEF 188 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 + P + FP+RNR+ISGL + V ++E+ +SG++ TA A+EQ RE+F P Sbjct: 189 LMQTEPAKWTFPKRNRVISGLCQKVYILESGKKSGTISTATSAMEQNREIFVFDHP-HQF 247 Query: 258 GSEGPHWLIKQGAILVTE 275 +EG L++QGA L+T Sbjct: 248 DNEGGKMLLRQGAGLLTG 265 >UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8G0_COPPD Length = 257 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 4/252 (1%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++ D + +L+ +V G + +VG+R S YG R + Sbjct: 6 RVLKPDDHIFCGRLVQQGLERPV-YVRGNSIPPLEKTVGIVGTRHASSYGLRVAYELGKY 64 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 A+ G + SGLA GID AH+ AL+ G ++ VLG+GL+ +P+ L + E+ G Sbjct: 65 YASEGYVVVSGLAYGIDQKAHEGALER-GTTVGVLGHGLDFHYPKSTLLLRKRI-EEKGF 122 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 +++ + D P F RN +I+ LS ++VVEA +SG+L+TA AL+ G+EV A+PG Sbjct: 123 VITWYKPDQGPRKAFFRERNWLIAALSDFIVVVEAPAKSGALITASFALQMGKEVKAVPG 182 Query: 253 PIGNPGSEGPHWLIKQGAILVTE-PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFP 311 I + G + LI GA + P++ + + Q +A Sbjct: 183 DIDRDSAMGSNMLIFDGAEPILAIPKDTDQQFRSCRTVQDLVATVGSLVEAGQLLAKWQS 242 Query: 312 ELLANVGDEVTP 323 + E Sbjct: 243 TGKVILEGETIH 254 >UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU48_9BACI Length = 191 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + ++AVVGSR Y + L SGLA G D AH+ + + G ++ Sbjct: 6 MRERKIAVVGSRKADEYTTAALKKLLPQLVEEQFITVSGLAAGADEFAHRLTITLKGDTV 65 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 V+G G I+P + LA + ++ L+SE+P D P ++FP RNRIISG++ VLV Sbjct: 66 GVIGGGFRHIYPASNRDLANFMAKKH-LLISEYPPDTRPQRWHFPMRNRIISGMTSAVLV 124 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 +A+ +SGSL+TA +L +GR+V+ALPG + +P SEG + LI+QGA L+T E+I+ + Sbjct: 125 TQASRKSGSLITAEISLNEGRDVYALPGRLDSPLSEGCNHLIQQGAKLITSSEDIISEFK 184 Query: 285 FG 286 + Sbjct: 185 YD 186 >UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyrococcus furiosus RepID=Q8U1A8_PYRFU Length = 217 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + IP DS YPP L D P ++ G + L+ +A+VG+R S GE + Sbjct: 16 RRKITRIPIDSPDYPPLLKQIKDPPKIIYAIGNVRLLNKPAVAIVGTRQPSERGEYYAEK 75 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 E A +G I SGLA GID + K AL+ I VL + +N I P+ + +LA ++ Sbjct: 76 VAEFYAKQGFVIVSGLALGIDSIVIKTALKTGAHVIGVLPSPVNDIVPKSNEKLAEKIIR 135 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GG L+SE P P Y+F RRNRIISG+S V+V+E+ L+ G++ T + A +Q R + Sbjct: 136 SGGLLISELPEGTKPKKYHFVRRNRIISGISFAVVVIESELKDGTMHTVKFAKQQRRIIL 195 Query: 249 ALPGPIGNPGSEGPHWLIKQG 269 + N + G L +G Sbjct: 196 -----VTNLPASGNAKLKNEG 211 >UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8I4_HAHCH Length = 233 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGERW 125 ++ IP +S YP L + + P L+ G L L + +A+VG+R + G Sbjct: 2 HKKFGVIAIPLNSSEYPKHLKSIANPPATLYARGNLDLLYEAPGIAIVGTRNATANGLEI 61 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + ++G + SGLA GID AH+ L G +IAVL +GL+ PR++A L + Sbjct: 62 TKRVAAYAVSKGAIVVSGLALGIDAAAHQGCLNAGGRTIAVLASGLHIATPRQNAGLGDA 121 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 +LE G VSE P PP F RNRI GLS +++E+ ++SG+ A+ +++ Sbjct: 122 ILESDGLWVSEHPEGTPPARQYFVPRNRIQVGLSACSVIIESDVKSGTTTHAKFCVQEKH 181 Query: 246 EVFAL---PGPIGNPGSEGPHWLIKQ-GAILVTEPEE 278 +FA+ P S GP +++ GAI + + Sbjct: 182 PLFAVVPQPRNPFGLNSAGPEMMVRDMGAIPLKTRND 218 >UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepID=Q04VL7_LEPBJ Length = 327 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 9/250 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 I + ++++A + + ++ + + S E L++ ++ YP Sbjct: 20 IFKKLNSWANLNAYLERFLPSSVLRGALYAS------EKISNDLKKTGFSVLSFFDPEYP 73 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT-ITS 142 L D P LF +G L+ L AVVG+R S L L G + + S Sbjct: 74 SLLKEIYDPPLILFYKGNLNILDLSFAAVVGTRNPSPISCYAAELIPYYLKENGFSGVVS 133 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL-LEQGGALVSEFPLDV 201 G A+GID + AAL I V+G G T +P + +L + + +++E+P Sbjct: 134 GFAKGIDATSMNAALDEELAVIGVMGTGPETEYPFENRKLYQRMKYAKRTLILTEYPPGQ 193 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 L Y FP+RNRI++G+ V ++EA +SG++ +A ALEQ R +F ++G Sbjct: 194 KILKYTFPKRNRIVTGMCNSVFIMEAPEKSGAISSAHNALEQNRNIFIF-SDPRQTKNQG 252 Query: 262 PHWLIKQGAI 271 LI+ GA Sbjct: 253 GEILIRDGAE 262 >UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G5K2_PROM2 Length = 311 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 129/243 (53%), Gaps = 5/243 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 L L+SI + ++ + +I + ++ ++ A+ F + L Sbjct: 9 LTLLSIDGFGLVNSYKLLSSLESIRTDNIIEALNRKKDFSISSAEWFAKKDK--FLEKLD 66 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWYGER 124 ++ IP S YP L+ D+P +FV+G+ +L+ LA+VG+R + Y Sbjct: 67 KSQEQKISAIPFTSNDYPKALMELNDFPLVIFVKGKSESLNFQNTLAIVGTRNPTKYTYD 126 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 C A+R ++ SGLA G D +AHKAA+++ ++AVL NGL+ I+P+ +A LA+ Sbjct: 127 NAPEICNIFASRSQSVISGLAIGCDSIAHKAAIKMGIPTVAVLPNGLDEIYPKENANLAS 186 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 +++ GG LVSE+ + + P Y F R+RI +GLS+ L++E++ + GS+ R + Sbjct: 187 EIIDYGGCLVSEYLIGIKPSRYQFVARDRIQAGLSRVGLLLESSSKGGSMHCIRKLEKLR 246 Query: 245 REV 247 R+V Sbjct: 247 RKV 249 >UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKC9_BDEBA Length = 315 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 3/249 (1%) Query: 37 VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGAL 96 + + L + +K E SL L+ + + YP D P L Sbjct: 46 LRFRWPELGEAMTKNH-ELFKKHCEESLQ-LKMQGVNFVVYGEVLYPELCYQMADPPLTL 103 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGE-RWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 G L++ L+VVGSR + + + I SG ARG+D AH Sbjct: 104 SYRGSPAWLNARTLSVVGSREPAADSLLWMEKELGLFCEQQRPCIVSGGARGVDQKAHSV 163 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 AL+ ++ VL +GL I+P ++EQGG +SE+ + F RNR+I Sbjct: 164 ALRKFCPTVVVLPSGLGEIYPANLKEWMGLVIEQGGCFLSEYDHQQKMHKHLFHHRNRLI 223 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 + L + L+VEA RSG+L+TA A + GR V+ +PG +P +G L+ GA V + Sbjct: 224 AALGRASLLVEARRRSGTLITAHQAAQIGRPVWVVPGHPLDPHFQGALDLLMDGAQSVRD 283 Query: 276 PEEILENLQ 284 +++L Q Sbjct: 284 AQDLLMFFQ 292 >UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetales RepID=C4RB86_9ACTO Length = 345 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 131/300 (43%), Gaps = 7/300 (2%) Query: 3 DTEIWLRLMSISSLYGD-DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + + L+ L + + +V + L R + ++ Sbjct: 48 ERAALVALLRQPDLSWSDTTHEVQEAGTALGVLTRLVGRADTLFPDT--RSVDSLIEAAA 105 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + + E YP QL + P LF G L +AVVGSR S Sbjct: 106 GDLLAWQAEGVAVRAFFDEDYPAQLRDIREMPPLLFARGSLR-PDPRAIAVVGSREASDR 164 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G +LA+RGVT+ SGLA+GID AH+AAL G ++AV+G G+ +P + Sbjct: 165 GLEVAGSVATSLASRGVTVVSGLAKGIDTAAHEAALAAGGRTVAVIGTGIRRHYPAANQA 224 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + E G ++S+F D P +FP RN ++SG + +VVEA RSG+ + AR AL Sbjct: 225 LQEHIAE-VGLVISQFWPDAAPTKQSFPMRNAVMSGYAAATVVVEAGERSGARIQARLAL 283 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR V L G + + + G + E++E + L +P APE + Sbjct: 284 QHGRPV-VLTGQVMRHEWARS-FADRPGVHVARGTVELMEAVDAILDRVPTAPELEGFPE 341 >UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU Length = 315 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 7/298 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M+ L + + +++ + + I L+ +R P + Sbjct: 1 MMKLLYIDNLKFLKG---KEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKL 57 Query: 61 ESSLCW-LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +++ + S+ YP +L D P A++ +G L AVVGSR S Sbjct: 58 VELQEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKIS 117 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 R F LA GV I SG A G D AH AA+ N + AV+ ++ I+PR++ Sbjct: 118 KTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQN 177 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + + LLEQGG +++E Y F +RNR++SGLS + + A L+SG+L+TA Sbjct: 178 RKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAEL 237 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 L+ G +V+ +G L GA + +++ L + ++S Sbjct: 238 GLDLGLDVYVYDLDFCG---DGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDS 292 >UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinalis AWQC310F RepID=D1FNP2_9NOST Length = 208 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 2/205 (0%) Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 LQ +IAV+G G++ I+P +++ + +L + G ++SE+P PP +FPRRNRII+ Sbjct: 3 LQAGRKTIAVMGTGVDVIYPHKNSHKSPQIL-KSGIVISEYPAKTPPNRTHFPRRNRIIA 61 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE- 275 GLS+ VLV+EA L+SG+L+TA A E R+V+ALPG I + S+G LI QGA L+ Sbjct: 62 GLSRAVLVMEAPLKSGALITATYANEFNRDVYALPGKIDDQPSQGCLKLISQGAGLINHQ 121 Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPV 335 E+L L + SP ++A +++ + + D + ++ G Sbjct: 122 LNELLIMLGAIPQIDIETETPLVKSPPIPNLAPELQQIINILAIDALSFDFIIQKTGMNA 181 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 V + LL+LEL G + +PG + Sbjct: 182 AIVSSSLLQLELMGLVTQLPGMRYQ 206 >UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6R6_PARDP Length = 331 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 14/303 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--------LQQTG--LTLRQAQRFLSFPR 57 L L SI + + + +I+ + + + L+ G L+ A + S Sbjct: 23 LALSSIKGVGFETLRKISERGIAYAEVIDLQNKNDVSTILRSAGARLSDETAAPWGSTRE 82 Query: 58 KSIES---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +++ L L + + +I + YP QLL D P LFV+G L +AVVG Sbjct: 83 RALSRGYELLDRLTKIDGKVIFHSDKEYPSQLLDLPDAPRWLFVQGNSEVLRGPSIAVVG 142 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G R L+ SGLA GID H A+L+ +I+ LG G+ + Sbjct: 143 SREPSDDGIWLSRYVGFNLSEWSCPTVSGLAVGIDQEIHSASLRAGVPTISFLGTGIFSD 202 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR +L ++ + GGA+V+E+ + NF +RNR+ + L+ ++ VE A +SG+ Sbjct: 203 YPRNSEKLRDAIAKSGGAIVTEYLPADTYSSKNFVKRNRLQAALAAALIPVEWAAKSGTA 262 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 T R A R + L P + + I + A + T P++ LE +QF L + P Sbjct: 263 HTVRYAASLSRPIACLRLP-FGKVPDWVNTEIAKKASVFTVPQQQLEFVQFVLASVRSRP 321 Query: 295 ENS 297 E Sbjct: 322 ERQ 324 >UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacillus cereus G9842 RepID=B7IYS3_BACC2 Length = 290 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 20/289 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQS-------HIDAVVLQQTGLTLRQAQRFL 53 M E+ L + + + ++ ++ + + + Sbjct: 1 MNIKEMIFVLYDL-GISLATLSKLYRESNEEQLNHLLEGDFLELQFSLGVFNDNELELLS 59 Query: 54 SFP-----RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 S + +I L + YP L + P +F++G L + Sbjct: 60 SIDSIQKSKSNISKILSEFSDEKIEYFIYYEDGYPTSLKSIPSPPFFIFMKGNRSLLENK 119 Query: 109 QLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + +VG+R + + + + + + I SGLA G D AHK L NG +IAVL Sbjct: 120 FICSIVGTRNPTDQTLKQIDSTVQEMVSTDIVIASGLALGTDIHAHKCTLDSNGKTIAVL 179 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFP-LDVPPLAYNFPRRNRIISGLSKGVLVVE 226 + ++ + P+ H A +L + G L+SE+ + N+ RNRIISGLS V++ E Sbjct: 180 PSPIDDVTPKSHKPYANEILAKDGLLISEYYKSETVFKKTNYIHRNRIISGLSNAVIIAE 239 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 + +SG++ TAR A +Q R ++ + S G ++ + + Sbjct: 240 CSEKSGTMHTARYAYKQKRPLYC-----FDNKSTGVLKILSSNSARIYT 283 >UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UP33_METS3 Length = 312 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 134/311 (43%), Gaps = 11/311 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMV-RIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M+ + L L I+ + + + + +D + + + ++ L + Sbjct: 1 MIKYKELLFLNKINRVGKVTIYTKYWDMLINSKDMDDLFNKLHKSN-KISEDKLIKAKNE 59 Query: 60 IESSLCWL-EQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++I + YP +L P L+V+G + AL +A++G+R Sbjct: 60 AEKIYDSVVNDSEINVITVFDKEYPKKLFDMENQKPLYLYVKGSMDALSKSNIAIIGTRK 119 Query: 118 HSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S E + + + + + SGLA G D +AH+ + N ++IA L GLN I P Sbjct: 120 PSNNTEIFEKKLVKRILDVSKRVVVSGLALGCDKIAHETTVNENKITIAFLPCGLNVISP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +LA S++EQGG LVSE+ D ++ R++I++ S V V++ +SG++ T Sbjct: 180 SSNKKLAKSIIEQGGCLVSEYEPDKKVFKRSYVERDKIVAAFSDIVFVLQCGEKSGTMHT 239 Query: 237 ARCALEQ----GREVFA-LPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 ++ R+++ LP + + G ++K V++ +E E + Sbjct: 240 VNATIDFKKVNHRDLYVYLPEDMSDGDYSGNISILKSNNGTKVSDIDEFCEEIVILEKDN 299 Query: 291 PDAPENSFYSP 301 + S Sbjct: 300 NLNKNADYQSK 310 >UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR87_BIFLI Length = 336 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 7/245 (2%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL 105 R L + + E+ + + YP +L D P LF EG + Sbjct: 74 SRARAAELESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRM-VQ 132 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++VVGSR ++ + L + G + +GLA GID AH AL+ G ++A Sbjct: 133 DELGVSVVGSRKADAESLKFAQDTASMLVSCGFAVIAGLASGIDTAAHVRALEEGGRTVA 192 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +G G+ +PR + L + + G ++S+F D P Y FP RN +SG +VV Sbjct: 193 FIGTGITKRYPRENGTLQDRIG-RDGLVLSQFWPDQGPTKYTFPMRNASMSGYGVATVVV 251 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 +A+ SG+ + AR A + GR V + + ++G W K + +++++ Sbjct: 252 QASEHSGTRIQARQAQQHGRPVI-----LRDTVADGTEWGRKLASRPGVCVASTVDDVKA 306 Query: 286 GLHWL 290 LH L Sbjct: 307 RLHDL 311 >UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococcaceae RepID=C8LVU3_STAAU Length = 178 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 LAVVG+R + Y ++ ++ +TI SGLA+G D +AH+ AL+ N +IAVL Sbjct: 2 HHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVL 61 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G T +P+ L + E+ G ++SE+P P Y F RNRIISGLSKGVL+ EA Sbjct: 62 AFGHQTHYPKSTLALRNKI-EEKGLVISEYPPHTPIAKYRFSERNRIISGLSKGVLITEA 120 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +SGS +T ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 121 KEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 176 >UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWE1_9GAMM Length = 313 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 14/261 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRI-AHW--VAKQSHIDAVVLQQTGLTL-----RQAQRFLS 54 + L L I + + + +I DA + ++ + + S Sbjct: 11 EKLALLALSEIRGVGFETIKKISLDQIPFTTFFQSDAGQHYKPHISSNATYSKIKEYLAS 70 Query: 55 FPRKS-----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 + + + +L+ +I + +P +L D P +F+EG AL F Sbjct: 71 SRSINDALDLAKRNFDYLQNRQISIILPGEDRFPKKLHDLNDMPQWIFIEGASEALIGFS 130 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + VGSR S G+ F L +T SGLA GID + H+A++ + ++AVLG Sbjct: 131 VTAVGSRKPSAEGKWLANYFGLCLQDLKLTTISGLAEGIDQIVHRASISAHLPTVAVLGT 190 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G+ + +P+ L +LE GGALV+E+ A NF RRNR+ + L + +E + Sbjct: 191 GILSDYPKGSQELRGRILENGGALVTEYLPRDTFSAKNFVRRNRLQAALGDIIFPIEWQI 250 Query: 230 RSGSLVTARCALEQGRE-VFA 249 +SG+ T + A E R +F Sbjct: 251 KSGTAHTVKFAREMHRPMIFC 271 >UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae RepID=B9LA92_NAUPA Length = 235 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 45/265 (16%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 L+ +G L L+ ++A+VGSR S Y + ++ + L+ + I SG A GID AH+ Sbjct: 13 LYYKGNLELLNKPKIAIVGSRRASKYSKDITKILAKRLSQK-YVIVSGGALGIDKAAHEG 71 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 A +I V + L+ I+P+ + L ++ E +SE+ ++ P + F +RNRII Sbjct: 72 AYPN---TIFVSPSSLDIIYPKSNKSLIQNIYE-NPLAISEYEMNFAPFKHTFLQRNRII 127 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVT 274 +S V++ EA ++SGS+ + A E G++V+ LP I S G L K+ A ++ Sbjct: 128 VKISNLVIIAEANIKSGSMRSFEWAKEYGKKVYVLPHRIN--ESSGTRHLAKENMAEVIW 185 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 + +E ENL + ++ ++ G Sbjct: 186 DIDEFCENLGIEKNTNI------------------------------LTLNEALQKYG-- 213 Query: 335 VPEVVTQLLELELAGWIAAVPGGYV 359 + L E+EL G + G Sbjct: 214 -----STLYEMELEGKVEIKNGKVY 233 >UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KR12_9BACE Length = 309 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 122/314 (38%), Gaps = 35/314 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQ------AQR 51 M + E W + ++ W + LQ G + +Q ++R Sbjct: 1 MKNREDW------KEVVKKRQNKMEAWRLSFLSVEELL--CLQLLGYSSKQLYENVESER 52 Query: 52 FL--------SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGEL 102 + + L + IP + E YP P + V G Sbjct: 53 YSLKETASMSIRELDKAKRILDRQTKAGVITIPYNDEAYPHHFRNLCRDAPLLIHVLGNK 112 Query: 103 HALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L+ +A++G+RA G F E + +G + SGLA G D AH+ L G Sbjct: 113 DLLNREDNVAIIGARAADKEGLNMAYEFAEQMGKQGHIVISGLALGCDTAAHQGCLDAGG 172 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +IAV+ +GL+ HP+ + L ++ +GG ++SE P V R R+ L++ Sbjct: 173 QTIAVVASGLDITHPKVNKSLQDEIIAKGGTILSEHPFGVKANPTRLVARCRMQVVLTQS 232 Query: 222 VLVVEAALRSGSLVTARCALEQG-------REVFALPGPIGNPGSEGPHWLIKQG-AILV 273 V+V + + SG++ R A E V+++ N + G +L+ A+ + Sbjct: 233 VIVAQCPIISGTMYAVRFAQEYNGVPFGWENNVYSVQYDTQNELNSGNKFLLDYNLALPI 292 Query: 274 TEPEEILENLQFGL 287 +EI +L + Sbjct: 293 RLGQEITLDLDNKI 306 >UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacterium RepID=UPI0001BC4767 Length = 309 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 19/255 (7%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR----FLSFPRKSIE 61 RL+ S L ++ RI + + + ++ T ++ ++ F R+ I+ Sbjct: 25 FLYRLIKQSILENKNLFRI-----SEEELFQFICEEQLYTRKEYEKVLILIEDFFREEIQ 79 Query: 62 SSLCW----LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--SFQLAVVGS 115 + ++ +IP E YP L + P L+++G+L +A+VGS Sbjct: 80 EEISNIETICKKEEIEMIPYGEENYPFPLKNIRNSPYVLYLKGKLPQTEILKKSVALVGS 139 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-I 174 R S G+ + + + L + SGLA+GID + H L+ G + A+LG GL I Sbjct: 140 RDCSEEGKNFAKKVAQYLKKNKIYNISGLAKGIDSIGH---LETLGQTGAILGQGLAREI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA+ +L GG L+SE P P + RNR+ SGL+ G+++ E+AL+ G+L Sbjct: 197 YPRENQILASRILNMGGFLLSELPPLTPVSMEHLIARNRLQSGLTSGIIIAESALQGGTL 256 Query: 235 VTARCALEQGREVFA 249 T R A EQG++++ Sbjct: 257 HTFRFAREQGKKIYV 271 >UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FRD0_SORC5 Length = 350 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 93/347 (26%), Positives = 135/347 (38%), Gaps = 33/347 (9%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLL----ATTDYPGALFVEGE 101 R A + R S +S+ + I YP QL T P L++ G Sbjct: 5 ARHAAVLVLISRNSSRASVDRPRMASIE-IQPADPSYPAQLWALVTETEAAPPTLYLRGA 63 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L A +A+VG+RA S R+ R L G +I SG ARG+D AH+ AL Sbjct: 64 LPAC--PGVAIVGTRAASDEALRFTRALAAALGEAGFSIWSGGARGVDAAAHEGALDARA 121 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 ++ V G G +PR HA L A +L GGAL++ P D PPL F +RN +++ L+ Sbjct: 122 PTVVVGGGGHAHPYPREHAALFARVLAAGGALLARVPDDTPPLPALFLQRNAVLAALTLA 181 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 +VVEA + SG+ A A GR + +P +P G + GA +T ++++ Sbjct: 182 TVVVEAGVESGARSAAAAARRLGRHLCVVPHAPWSPRGVGCALELVSGARPITRAADVID 241 Query: 282 NLQ--------------------------FGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 L + ++ +L Sbjct: 242 VLGGQAPPPRRRARRSARSRSPGGGTLPLPEAALGARTGVLPEENGPPPSMSAAERAVLD 301 Query: 316 NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + VD V ER G P V LL L L + P G R Sbjct: 302 ALDARPAHVDEVCERTGLPPRRAVEALLTLTLQAVVVEGPAGLFRRA 348 >UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium RepID=C3WS18_9FUSO Length = 314 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTG--------LTLRQA 49 M E L I+S Y + + + + +I+ L + + Sbjct: 11 MYSKEELLIFSFINSNYDISIQNLTYKIFNFSNKENINFFKLNRIEKIEFLKSFFSENNM 70 Query: 50 QRFLSFP------RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 ++ L+ + +E + E+ N + E YP L+ + P +FV+G L Sbjct: 71 EKILNIFDRINLYKIEVEKIIKNCEEKNIKIFYYSYENYPKNLINIKESPYIIFVKGNLP 130 Query: 104 ALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 A+VG+R S G + L+ + SGLA GID V H +LQ Sbjct: 131 IDEELEKSFAIVGTRKPSKEGINFAGDIGSYLSKNNIYNISGLALGIDTVGHNMSLQ--- 187 Query: 162 VSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 + A+LG GL+ I+PR + +LA +LE G L+SE ++ +R+R+ S L+ Sbjct: 188 KTGAILGQGLDLEIYPRENIKLAEMILENNGFLLSELIPQTEISLFSLIKRDRLQSALTS 247 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVF 248 G+++ E ++SG++ T + A EQ +++F Sbjct: 248 GIIIAETGIKSGTVNTFKYAREQKKKIF 275 >UniRef50_UPI000169347A DNA processing protein DprA, putative n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169347A Length = 198 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 4/193 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRK 58 + + L + + + + + + L Q GLT +QA FL+ K Sbjct: 6 DKRLMLIALNETPGIGMKTIAMLHQKLDDLTVLQTCTQKELIQLGLTEKQASSFLAIQNK 65 Query: 59 SI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I + L + E+ + ++ YP L P L+ G+L L + +VG+R Sbjct: 66 GIIDKRLAFYEKQDIQILTVADPDYPNMLKQIYQPPWVLYAIGDLSILGLPMIGIVGTRK 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ +L RG+ I SG+ARGID AH+ ALQV G ++AVLG + I+P Sbjct: 126 KNPYGKKVTEQLAASLVQRGIGIVSGMARGIDSSAHRGALQVKGKTVAVLGGPADKIYPP 185 Query: 178 RHARLAASLLEQG 190 + +L + E G Sbjct: 186 ENGQLYRQIAESG 198 >UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteobacteria RepID=A6Q7E6_SULNB Length = 258 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 11/250 (4%) Query: 82 YP-PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 +P P+L + YP LF +G+L L ++++VG+R S Y + + + L RGV I Sbjct: 7 FPIPELESMKKYPPELFYKGDLSLLKRPKVSIVGTRMPSNYTREYTYMLAKALTKRGVCI 66 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 SG A G+DG+AH+ A N +IAV+GNGL+ +P HA++ ++ E G ++S+F Sbjct: 67 VSGAAMGVDGIAHEGAGFEN--TIAVVGNGLDIRYPVVHAKMIEAI-ESNGLMLSQFNDG 123 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 ++F RN ++ L ++V EA L+SGS+ + AL+ G+E+F LP +G S Sbjct: 124 FRATGWSFVVRNELVVALGDVLVVTEADLKSGSMRSVEFALKMGKEIFVLPHRLG--ESM 181 Query: 261 GPHWLIK-QGAILVTEPEEILENLQ----FGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 G + L++ + A + + E + Q V + Sbjct: 182 GTNALLQEEKATAIMDIEAFASRFGRAVESEVEKDEFFYFCQSMPTFDQTVEKFGERVYE 241 Query: 316 NVGDEVTPVD 325 D + ++ Sbjct: 242 AELDGIISIE 251 >UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter RepID=C3XNA9_9HELI Length = 267 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 22/276 (7%) Query: 83 PPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITS 142 PP L + L+ G L L + ++ ++G+R + Y + + + + L+ G+ I S Sbjct: 9 PPSLTHIKEL-ETLYYCGNLGLLKAPKVTIIGTRNPNPYAQSFTQTLAQKLSKYGIVIVS 67 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G A GID +AH AL +I + + L+ I+P+ +A + + + +Q G ++S+F Sbjct: 68 GGALGIDIIAHANALPN---TIMISPSSLDYIYPKSNAPIISKIYKQ-GLILSQFTPTYT 123 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 P Y+F RN+I+ L + V++ +A L+SGS+ +A+ AL G+ +F P +G S G Sbjct: 124 PHRYSFLERNKIVISLGECVIIPQADLKSGSMQSAQYALSLGKTIFVPPHHLG--QSLGT 181 Query: 263 HWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEV 321 L K A ++ + + + L + P D +D L F + + Sbjct: 182 QSLAKNNQARVIWDIDVFVNELCASILDSNITPNLRASLRDSRDEILEFCQSNPFFEEAF 241 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 L E EL G I G Sbjct: 242 LRFGE--------------MLFEYELEGKIRRNNGR 263 >UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FFG5_9BIFI Length = 461 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 90/361 (24%), Positives = 124/361 (34%), Gaps = 54/361 (14%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLAT-----TDYPGALFVE 99 R P W +I +P QL P L+ Sbjct: 83 DGWHARLDCLPSLDWHGLEDWFTMDGSQWIIGPQDGAWPAQLEDLSTHKDWAAPLCLWGV 142 Query: 100 GELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G + +AVVGSR + YG R A G I SG A G D AH AL Sbjct: 143 GSMAALTSCPSPVAVVGSRGVTDYGRTVAREVALRAAADGHLIVSGGAMGADAAAHWGAL 202 Query: 158 QV--------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 G ++AV GLN I P + RL ++ GGALVSE + P A F Sbjct: 203 DALRQRGLDAAGRTVAVFAGGLNHIGPSSNLRLFEAIRANGGALVSEMCPNTIPEARRFL 262 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNRII+ L+ V+V +A LRSG+L TA + R V A+PG I P + G + LI Q Sbjct: 263 LRNRIIAALASTVVVAQARLRSGALNTAGWGNDLNRVVLAVPGDITVPHNAGCNRLIAQS 322 Query: 270 AILVTEPEEILENLQFGLHWLPDAPE---------------------NSFYSPDQQDVAL 308 ++ + H E + + + Sbjct: 323 ESIILTRTSGIGEFCHAPHEPQALYEVTSETTSFSTGCARTGGICADSDASKSAEHVITP 382 Query: 309 PFPELLANV-----GDEVTPVDVVAERAGQPVPE------------VVTQLLELELAGWI 351 L+A + D + G+ PE V+ + LE G + Sbjct: 383 SQQALIAAIRSCNRQHIRATPDALLAAVGKTAPETSGQKPMAGIGQVMADIGTLEARGLL 442 Query: 352 A 352 Sbjct: 443 R 443 >UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH Length = 281 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 22/276 (7%) Query: 2 VDTEIWL--RLMSISSLY------GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL 53 W L+ + + + + + I + + Sbjct: 7 DQKLAWYHAALILTKKVPVGSVTANNKLRDMLLNIGSFEDIYNQHFGMFPIEEKV----- 61 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 + S+ ++ + +I + YP +L + L+ G+L L++ ++ Sbjct: 62 ---ENQLNSAYSKID-FDFKVITINDPEYPEKLRSVEGATPVLYCRGDLSLLNADRTISF 117 Query: 113 VGSRA-HSWYGERWGRLFCETLATRGV-TITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R H+ R G L G I SGLA G D +AH+AAL+ +G +IAVLG Sbjct: 118 VGTRELHNPEHVRHGEAVISRLLNAGYQAIVSGLAAGSDTLAHQAALKYSGRTIAVLGTP 177 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL-SKGVLVVEAAL 229 L+ P+ + L + + L+SE+P+ + F RNR GL S GV+V A Sbjct: 178 LDQYFPKENRELQDEI-AKNHLLISEYPIGIRSFGSFFANRNRTTVGLSSDGVVVARAGD 236 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 RSG+ R +EQG++++AL I P + Sbjct: 237 RSGTQYAIRHCVEQGKQLYALENNIYEPEYQWVKKY 272 >UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter RepID=Q1CUG8_HELPH Length = 266 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 30/278 (10%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGV 138 E P D P L+ G+ L + ++A++G+R + Y ++ LA Sbjct: 11 ENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNRA 70 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 I SG A G+D +A + AL +I + L+ I+P + ++ + Q G ++SE+ Sbjct: 71 VIVSGGALGVDIIAQENALP---KTIMLSPCSLDLIYPTNNHKVIQEI-AQNGLILSEYE 126 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 D P+ +F RNR++ LS V++ +A L+SGS+ +AR A + + +F LP + Sbjct: 127 KDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--E 184 Query: 259 SEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV 317 S+G + L+++G A + + + L H + L Sbjct: 185 SDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKFG 244 Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 LLE EL G I + Sbjct: 245 DK----------------------LLEYELLGKIKRIN 260 >UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A7I0D6_CAMHC Length = 268 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 22/263 (8%) Query: 90 TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 + P L+ G L L+ ++A+VGSR S Y + L RG+ + SG A G D Sbjct: 19 KNAPKKLYYCGNLMLLNMPKIAIVGSRKMSVYTKNLIIKTACELKNRGICVVSGGAIGCD 78 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 A KAA +I + NGL+ I+P+ ++ + + A +SE+ + F Sbjct: 79 IAAQKAAFP---YTIGIFANGLDIIYPKENSEQISKIYSDALA-ISEYENGTCAQRWQFL 134 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNRI+ +S V++ +A L+SGSL +A+ AL G +F P I S G + L+ + Sbjct: 135 ERNRIVVAISSAVIIAQADLKSGSLNSAKTALNLGIPIFTFPHRID--ESRGTNMLLAEK 192 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 + +++++ L + + +D L F + ++ + + Sbjct: 193 KAFL--IDDVMKFADKICDKLGVQNFQTSLNSVPKDEILEFVKYNNDLNSALLKFGDLI- 249 Query: 330 RAGQPVPEVVTQLLELELAGWIA 352 E ELAG I Sbjct: 250 -------------YEYELAGKIE 259 >UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding protein n=25 Tax=Enterobacteriaceae RepID=C2DIW6_ECOLX Length = 400 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 125/344 (36%), Gaps = 25/344 (7%) Query: 39 LQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGAL 96 ++ + L+ + + ++ ++ YP +L TD P L Sbjct: 62 WSDPRISQERILGLLARGHSLALA-VDKWQRAGLWILTRGDADYPVRLKNRLRTDAPPVL 120 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 F G L + +A+VGSR R+ + LA +G+ + SG ARGID A +A Sbjct: 121 FGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGICVISGGARGIDECAMASA 180 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L+V G ++ VL + L + L+ L+S F +V N RN+ I Sbjct: 181 LEVGGTAVGVLADSLLKT--STLVKWREGLIAGNLVLISPFYPEVRFTVGNAMARNKYIY 238 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL-VTE 275 L++ +VV A + G++ A AL+ + + L++ GA + Sbjct: 239 CLAESAMVVRAGMTGGTITGAMEALKHQWLPMQVKPNQDMQSA--NSRLVENGASWSAEQ 296 Query: 276 PEEI------------LENLQFGLHWLPDAPENSFYSPDQQDVALP-----FPELLANVG 318 E + L+ L E+ F LA + Sbjct: 297 AENVTIRLPDVPGLMYDRALRNAQPELFSLHEDDANYAVMPAHTPVDFYQLFVAELAILA 356 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 E ++ +A G + ++ L E G + + G+ + R Sbjct: 357 KESISIERLASCTGLTIEQISVWLNRAEEEGRVIRLGEGHYQFR 400 >UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagibacter ubique HTCC1002 RepID=Q1UZN8_PELUB Length = 306 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 129/295 (43%), Gaps = 27/295 (9%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES----S 63 L L I +L + ++ + ++D L Q ++ + I Sbjct: 18 LALSKIKNLGKKRIFKLIFKIK---YLDEYSLSQLFDEFELYKKITKGDFEQIYQDSISE 74 Query: 64 LCWLEQPNHHL--IPADSE-------FYPPQLLATTDYPGALFV--EGELHALHSFQLA- 111 L ++ N + I + E + + T ++P LF+ + +L + Sbjct: 75 LDKMKSSNIKIYNIFENDEIGLFKDGLFSKNKIPTDEFPNQLFLINKSDLVIDSFKNIFT 134 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++G+R +S + L + I SGLARGID +AH+ ++++GV+IA+L NGL Sbjct: 135 IIGTRNNSAEAKDITEKVVTFLCDKQSIIISGLARGIDTIAHQKVIELDGVAIAILANGL 194 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 +TI+P + LA ++L G L++E+ + + R+RI + L+ ++++E+ ++ Sbjct: 195 DTIYPSENRELAKNIL-NKGILLTEYTFGLKAEKFRLIERDRIQAMLANDIVLIESDIKG 253 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK--QGAILVTEPEEILENLQ 284 GS+ + A + + ++ + + G ++ I + EE + Sbjct: 254 GSMHAMKWAKKLNKRIWC-----FDMNASGNKEILNNYDNVIKFSNIEEFINKFN 303 >UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVL8_METMJ Length = 314 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 104/265 (39%), Gaps = 14/265 (5%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW------------LEQPNH 72 A + + + + + + + E Q Sbjct: 27 AEYFRDPAVLRDLYADTFEPGAKPRRAYPGPLIARAEEIREKGLLAFYIDTLTGYRQKGV 86 Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++P YP +LL D P L+ G L +AVVG+R S G R + Sbjct: 87 RILPVFDAGYPGRLLGIRDPPFLLYQVGREETLAKPAVAVVGTRTISRAGIERARETVDL 146 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 L G + SGLA G D AH AA+ G ++AVL + + P + LAAS+ G+ Sbjct: 147 LVRLGYVVVSGLALGTDACAHTAAIDCGGETVAVLPGDVTVVVPGENRTLAASI-AGSGS 205 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL-P 251 L+ E F RNRI SGLS GV+V+E GS+ A A QGR V+ L P Sbjct: 206 LLGEITHLAGMHKGRFLERNRITSGLSDGVVVIETGKSGGSVRQAETAFRQGRPVYVLEP 265 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEP 276 G L+ GAI V P Sbjct: 266 DCSDAKAVAGYQHLVSCGAIPVESP 290 >UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepID=A4X0S0_RHOS5 Length = 226 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 90 TDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 + P AL++ G+ L + ++AVVGSR S GE+ R L +G+T+ SGLA GI Sbjct: 20 KNAPEALYMAGDAALLKTGTRVAVVGSRKSSENGEKRARALVRALVEQGITVVSGLAEGI 79 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D VAH+ A++ G +IAVLG L+ +P ++ RL ++++ +S+FP P NF Sbjct: 80 DTVAHETAIEAGGRTIAVLGTPLSQAYPAKNRRLLD-IIKKDHLAISQFPEGYPTKGENF 138 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 PRRNR ++ + +VVEA +SG+ A+ GR V+ L + PG P LI Sbjct: 139 PRRNRTMALICDATIVVEAGEKSGTRHQGWEAIRLGRLVYLLENVVNKPGMTWPKELIAY 198 Query: 269 GAILVTEPEEILENLQFGLHW 289 GA ++ E L+NL++ + Sbjct: 199 GAQVLR--REDLDNLKYDIPN 217 >UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNH8_FIBSS Length = 282 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 17/252 (6%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + ++ + + ++ ++ ++ + E +P LL Sbjct: 37 ASEKLKEEMFFDDAELYEIDNALKERSKAF---------SVLFKNDERFPKGLLNVKYPL 87 Query: 94 GALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 G + +G L L + ++VVGSR S G+ + L TI SGLA+G+D A Sbjct: 88 GMFYYKGNLDLLKNVCVSVVGSRHVSPKGKIRTEKLIKEL-HSNTTIVSGLAKGVDTAAL 146 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD------VPPLAYN 207 A+ + I V+G ++ +P+ + L + L+S+ PL Sbjct: 147 TTAISLGKKVIGVIGTPIDHYYPKENKELQDEI-ATNHLLISQVPLYKYDKQSFVTKKMY 205 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 FP RN +++ +S ++VEA+ SG+ A+ + G+++F L N P ++ Sbjct: 206 FPERNVVMAAISDATIIVEASETSGTHSQAKACFDLGKKLFILNSCFENHEITWPTKYLE 265 Query: 268 QGAILVTEPEEI 279 +GA+ V +I Sbjct: 266 KGAVRVRAITDI 277 >UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJY6_THEM4 Length = 323 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 17/224 (7%) Query: 46 LRQAQRFL-----SFPRKSIESSLCWLEQPNHHLIPADSEFYPP---QLLATTDYPGALF 97 + +RF+ K ES + + ++ YP L LF Sbjct: 71 EKLIERFILIFEDKNLLKQAESEKKLCFEEEIQYVVYENATYPKKLHALRKLDHPVYVLF 130 Query: 98 VEGELHALHSFQLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +G ++A ++GSR S G + + L+ + SGLA G D H+ + Sbjct: 131 YKGYWKDFDKLKIAAIIGSRNTSSEGLVLAKSLGKELSMNKIYNISGLALGADAAGHEGS 190 Query: 157 LQVNGVSIAVLGNGLNTI----HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 + G + AVLG GL+ I +P+ + +L +L G ++SE P P+ Y F R+ Sbjct: 191 M---GFTGAVLGQGLSKIEKRLYPKENIKLLFDIL-NKGIVLSEIPPSKKPIKYYFLCRD 246 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 RIIS L+ V+V+E+ + G++ T + A +++ I Sbjct: 247 RIISALADSVIVIESRKKGGTMKTFQYAASLNKKIIVWKKNIDG 290 >UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative DNA processing protein n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZPT6_PSEU2 Length = 455 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 107/315 (33%), Gaps = 10/315 (3%) Query: 31 QSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT- 89 + + L + ++ L + L + ++ YP L Sbjct: 53 PHAVLEG-WHDEKIPLLRIEQLLERGHALALA-LEKWSRAGLWVLTRSDADYPKALKHHL 110 Query: 90 -TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P LF G L+ + VVG+R + + +A G+T+ SG ARG+ Sbjct: 111 RNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGMTVVSGGARGV 170 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D A + L G I ++ + L + + L+ LVS F + A N Sbjct: 171 DEAAMQGGLNEEGTVIGIMADSLLSAALAS--KWRNGLMSNNLVLVSPFFPEAGFNAGNA 228 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 RN+ I LS+ +VV + R G+ A L++ + NP S G + L+ Q Sbjct: 229 MARNKYIYCLSQAAVVVRSETRGGTWNGAIENLKKAWVPLWVKRD-TNPES-GNYALVSQ 286 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL--PFPELLANVGDEVTPVDV 326 GA + + ++ P++ D + + + Sbjct: 287 GAQWLESAAKHVDVHTLSAQAKPESDPEMVPELAPTDQDASISEEDPVRSPPPRDEAPHQ 346 Query: 327 VAERAGQPVPEVVTQ 341 ++ G+ + Sbjct: 347 LSRDDGRSSQNANSA 361 >UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Thermobifida fusca YX RepID=Q47S14_THEFY Length = 322 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 104/290 (35%), Gaps = 5/290 (1%) Query: 18 GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPA 77 + I + + + L + L + Sbjct: 37 SKIVEEILDA-DSVRAVLEKTFRTRNMPCGTEDSPLERAIAKARALLDQCASHGVGVHAF 95 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG 137 + YP L + P +F +G + +AVVG R S G E L R Sbjct: 96 WEDHYPAALREIHEMPPVVFTKGAVAH-DRRAVAVVGPRRPSPRGRAIVSGVAEALVERN 154 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +T+ SGL G+D VAH A L+ G ++ VLG G+N PR +L E+ G ++S F Sbjct: 155 ITVVSGLTAGVDTVAHTAVLRRGGRTVTVLGTGINHYRPRGSRKLQQETAER-GMVLSPF 213 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 D P N R ++SG + +VVEA S + A AL GR V + N Sbjct: 214 LPDTPAARENLTLRTAVMSGYAAATIVVEAGEHSSARAQAHIALRHGRPVIFTQELLANQ 273 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 + + G + + E++E + L + + + Sbjct: 274 WAR--EHSERPGVYVASGIAELVEVVDSILAEATMTADEFIAALETSTFD 321 >UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FVV3_DESHD Length = 413 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 19/286 (6%) Query: 11 MSISSLYGDDMVRIAHWV-----AKQSHIDA----VVLQQTGLTLRQAQRFLSFPRKSIE 61 I L + + + + + ++ GL+ ++QR ++ + Sbjct: 26 TEIRPLTIKQWNQFLRRMFNAEIKNPAALFEVGKEDLKKRLGLSDEESQRIQFLLSRAGQ 85 Query: 62 S--SLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRA 117 + L L + + YP +L + D P LF G++ + +VGSR Sbjct: 86 AVVELENLNNMGIFVTTRAEKSYPQRLKSVLKKDSPPVLFYSGDIELTQMEGIGIVGSRN 145 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 G + + A +G+T+ SG A+G+D VA AL+ G I++L + L Sbjct: 146 IDPKGLEFTKELGSKSAKQGLTVISGGAKGVDEVAQNEALRQGGKVISILADSLAQKI-- 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVT 236 +H +++EQ L++ F P YN +RN+ I LS +VV + + G+ Sbjct: 204 KHKEAREAIMEQRLLLLTSFHPRAPFTVYNAMQRNKYIYALSHIAVVVSSDYSKGGTWAG 263 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 A L + + EG L+K GA + +++ Sbjct: 264 ATENLRNKWVPLFV--RKDDIVPEGNEKLLKMGANPL-SAKDLFSE 306 >UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vannielii SB RepID=A6UNG3_METVS Length = 352 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 3/216 (1%) Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--S 107 + + K + L+P +S YP +L D P L+ G Sbjct: 85 SKIKNKLFKRALEEYSMCIENKISLMPYESLNYPEKLRNIKDSPFLLYYIGNFPVEKDLE 144 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +A+VGSR E L+ + SGLA GID H ++ G + AVL Sbjct: 145 KSIAIVGSRDSVKLSEDISYNTAFELSKSKIWNISGLALGIDSFGHLGSIDSEGYTGAVL 204 Query: 168 GNGL-NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G GL + I P+ + L+ +L+ GG LVSE P R+R+ S L+ V VV+ Sbjct: 205 GQGLLDPIFPKENMELSEKILKMGGFLVSELPPSTKIDGIFLILRDRLQSALTDSVFVVQ 264 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 + G+L T A+ Q + V+ G EG Sbjct: 265 TGKKGGTLNTVNYAVNQSKTVYVFEPTEILDGFEGN 300 >UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTH3_DESMR Length = 336 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 25/307 (8%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL--------------- 64 +++ + L + + A + L ++ + L Sbjct: 4 SILQFLQAKGSGEALLRRFLLFAAINGKNAAKSLCTSINNLSNELKINNDVASNIVNSAS 63 Query: 65 ------CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSR 116 L + N ++ S+ YP L+AT D P LF +G + + GSR Sbjct: 64 EAFFLHESLYKDNINVAWIGSDVYPHHLVATLKYDAPPVLFFKGCNKLFDNMGVGFCGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R E L + + +TSG A G+D AHK AL+ G +I VL G+ Sbjct: 124 KASEKGLLITRRCVELLVDKKICVTSGYAHGVDMAAHKTALKNGGKTIFVLVEGIMRF-- 181 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +A L + VS+FP ++ A N +RN I GLS +++VE+ + G+ Sbjct: 182 QHKREIAEFLSDDNYLAVSQFPPNLTWSARNAMKRNGTIIGLSDAMILVESGITGGTFAA 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 + L++G+ +F + P +E IK G I + + + NL+ + N Sbjct: 242 GKETLQRGQPLFVIDYAAPGPSAEANPNFIKNGGIPIRGNSDGIPNLEKIFDITNQSRRN 301 Query: 297 SFYSPDQ 303 + D Sbjct: 302 DINTKDL 308 >UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=C5BTJ3_TERTT Length = 462 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 116/386 (30%), Gaps = 64/386 (16%) Query: 30 KQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT 89 + + + L+ + + ++ ++ YP +L Sbjct: 70 DPKALLQG-WHDARIGAERIIALLNRGHSLALA-MEKWQRAGLWVVTRSDPEYPKRLKQR 127 Query: 90 --TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARG 147 TD P LF G L++ LAV+GSR S + A G+ I SG ARG Sbjct: 128 LKTDSPPVLFGCGNKALLNAGGLAVIGSRNASEADLAFTEQVGAKAAKEGIAIVSGGARG 187 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 +D A A++ GV I V+ + L + L++ LVS F + A N Sbjct: 188 VDETAMLGAMKQGGVVIGVMADSLLKS--ATSIKWRKGLMDDHAVLVSPFYPEAGFSAGN 245 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG------NPGSEG 261 RN+ I L+ LV+ + + G+L A L++ + + ++G Sbjct: 246 AMARNKYIYCLADSSLVIHSGKKGGTLSGAEENLKKAWVPLWVKQTTDKDAANADLVTKG 305 Query: 262 PHWLIKQG-----AILVTE----PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 WL A L+ ++ E + + D + E Sbjct: 306 GRWLEADTQAFRIAQLMCNDGGRANQVQEQMGDLFSTPAQPKFFAETESDPEIEPDHKKE 365 Query: 313 L-------------------------------------------LANVGDEVTPVDVVAE 329 + L + + + + E Sbjct: 366 VVESEIESAVNENQAYNVVNSEQTAESEAASSGSVDFYQLFVSELQYLAKKPVTAEALIE 425 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVP 355 ++ L E G + + Sbjct: 426 STQLHKSQLTEWLKRAEEEGLLGKLN 451 >UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017439D3 Length = 169 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 2/167 (1%) Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +T+ SGLA GID VA K AL ++V+G GL+ ++P + L + E G +VSE+ Sbjct: 1 MTLISGLAEGIDTVALKTALDKGIEVVSVVGTGLDIVYPYDNRGLWERIAE-NGTIVSEY 59 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 PL P + FPRRNRII+G+S G+LV E+ + G+L+TA RE+FA+PG I P Sbjct: 60 PLGTQPTRWTFPRRNRIIAGMSDGILVAESFKKGGALITAELGFSMNREIFAIPGFINYP 119 Query: 258 GSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 EG + LIK A L T +I + + + Sbjct: 120 SFEGCNDLIKNNKAKLTTCGNDIAIEFLWDIKKEKSKLQKLTEEEQI 166 >UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanobacteria RepID=B7JUP3_CYAP8 Length = 426 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 122/329 (37%), Gaps = 19/329 (5%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRK--SIESSLCWLEQPNHHLIPADSEFYPPQLLAT--T 90 L Q + ++R ++ ++ + ++ +I YP +L Sbjct: 54 FISRLSQLTIGKLDSKRLVALLQRGGLLALTVEKWLNQGLWIISRGDADYPLRLKQQLKY 113 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P L+ G L LAVVGSR G + E A + + + SG A+G+D Sbjct: 114 LAPPILYGIGNKDLLSKGGLAVVGSRNVDQEGLDYTYHVVEACAEQNIQVISGGAKGVDQ 173 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 + L+V G I VL N L + S+ E L+S + N R Sbjct: 174 ASMLGTLKVGGTVIGVLANNLLKA--SVDGKYRTSIKEGKLTLISAVDPNASFHVGNAMR 231 Query: 211 RNRIISGLSKGVLVVEAALR-SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ I L+ LV+ A G+ A AL ++V L I SEG L+KQG Sbjct: 232 RNKYIYALANYGLVISADYNTGGTWAGATEALNTIKDVPIL-VRIQGTISEGNQHLLKQG 290 Query: 270 AILVTE------PEEILE----NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 A E +E++E + + N F + V+ EL D Sbjct: 291 AKPFPETPWNRPIKELIETTVSEYKSIEFRQNNTQLNLFSQDNHSVVSDNKDELTPQDPD 350 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + D + + + V+ +L+ EL Sbjct: 351 ISSRDDALKSASERLYYAVLPIILQ-ELN 378 >UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1TY42_MARAV Length = 460 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 18/276 (6%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVV-----------LQQTGLTLRQAQRFLSFPRKS 59 L + R A W+ Q + + + +T + Q L+ Sbjct: 22 SEAKPLTNKEWGRFAFWLKNQEMVPEDLLTGDLSQKLAGWTDSKITSDRIQTLLNRGSAL 81 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + ++ YP +L A D P F G + L+ +AV+GSR Sbjct: 82 AMA-MEKWTRSGLWVLTRSDSDYPKRLKARLGNDAPPVFFGCGNRNLLNQGGIAVIGSRK 140 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S ++ A G ++ SG A+G+D A AL+ G +I VL N L Sbjct: 141 TSDADLQFSHDLGAKSANDGRSVVSGGAKGVDEAAMLGALESEGTAIGVLANDLLRA--A 198 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 A+ L+ L+S F + A N +RN+ I LS + V + G+ Sbjct: 199 TSAKYRKYLMANNLVLLSPFYPEAGFNAGNAMQRNKYIYCLSDAAIAVHSGNSGGTWNGV 258 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILV 273 ++ + P +P G L+++GA + Sbjct: 259 LENIKHNWVPMWIK-PTDDPE-AGNATLVQKGAKWL 292 >UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD09_CHRVI Length = 228 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 4/205 (1%) Query: 88 ATTDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 P +V G+ L + +++VGSR S G R LA G+ + SGLA Sbjct: 17 ERQYAPERFYVAGDPAILETGARVSIVGSRQASPEGLARARKLARRLAGEGIVVVSGLAL 76 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID AH A + G ++ V+G L+ +PR + L A + + L+S+F + Sbjct: 77 GIDTAAHTATIAAGGRTVGVIGTPLDRSYPRENELLQARIATEH-LLISQFTPGTKTQRF 135 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 +FP+RNR ++ +S +++EA SGSL AL GR ++ +P P ++ Sbjct: 136 HFPQRNRTMALISDATVIIEAGETSGSLSQGWEALRLGRLLYITRALADDPALRWPSKML 195 Query: 267 KQGAILVTEPE--EILENLQFGLHW 289 GA ++++ + LE L L Sbjct: 196 DHGAQILSDATLPDFLEALPSRLTP 220 >UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6W9_9FLAO Length = 311 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 112/290 (38%), Gaps = 19/290 (6%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVR---IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M E + L +I + M + + + L+ + ++ L Sbjct: 1 MEKYIENIIALANIKGIGASFMKQHSHLISLYR------DNLEMLLSLSNKIDEKDLQVN 54 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +I YP LL D P L+ +G + LH +AV+G+R Sbjct: 55 ILKARDIISECNANGIKIISYLDADYPKLLLEIKDPPPVLYAKGNIELLH-KSIAVIGTR 113 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN--TI 174 + G + + + + I +GL GID + + +V I V+ GLN Sbjct: 114 KSTELGNKIAKKVGQYFSEH-WAICNGLVEGIDKHSITNSDEVFSNVIGVISGGLNFEKT 172 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + LA +L++ G L+SE + ++ + +RI +GLS+G+++++++ GS Sbjct: 173 SSKITKELAKKVLDRNGLLLSENEPNKKEDQFSGSKASRIQAGLSRGLILIQSSSNGGSK 232 Query: 235 VTARCALEQGREVFALPGPIGNP-----GSEGPHWLIKQGAILVTEPEEI 279 T + E R + + + G L+ + + + +I Sbjct: 233 YTLKTFSELNRPIGIIDFKTNSEYNNSDEFSGNRLLLTELKEGLQKMCDI 282 >UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6B2_DESAS Length = 453 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 119/327 (36%), Gaps = 15/327 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTLRQAQRFLSFPRK--SIESSL 64 L SL + + + ++ LT QR + + + L Sbjct: 32 FTLKEWDSLSHKIIESVMKRPGAFFYTTPEEWRECLNLTPENIQRIQNLLTEGGQLGIEL 91 Query: 65 CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + YP +L P LF G+ S +A+VGSR G Sbjct: 92 ERLSSLGIWVTTRAEASYPARLKKVLRQKSPVVLFGAGDASLFQSEGVAIVGSRNVDEIG 151 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-IHPRRHAR 181 + T G+T+ SG ARG+D +A +AL+ G I+VL N + T I R + Sbjct: 152 SYFAEKLAGRCVTEGLTVVSGGARGVDMIAQNSALRSGGKVISVLSNSMETSIRQRENR- 210 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCA 240 +++ L+S P YN RN+ I LS +VV + + G+ A Sbjct: 211 --EAIVAGRLLLLSSTHPKAPFNVYNAMDRNKYIYALSHYAVVVSSEENKGGTWTGATEN 268 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE---PEEILENLQFGLHWLPDAPENS 297 L+ G + +G G + L+++GAI +E + + + Sbjct: 269 LKAGWVPLFV--RVGGQVPAGNNRLLEKGAIAFDSEVLADEAVILRNWLSDNIQVIVNYE 326 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPV 324 ++ +++ P + + + V Sbjct: 327 SSKRNENNISSPKKDHQLAFRFDDSTV 353 >UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter RepID=A8FL55_CAMJ8 Length = 257 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 8/232 (3%) Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +G L L ++A++GSR S Y + L + + SG A G+D A AA+ Sbjct: 26 YKGNLSLLKQDKIAIIGSRRMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAM 85 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 +I + NGL+ I+PR + ++ + E AL SE+ D P Y+F RNR++ Sbjct: 86 PN---TIGIFANGLDQIYPRTNEKIIKQIYENALAL-SEYEDDYLPKNYDFLLRNRLVIA 141 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEP 276 LSK V+V +A ++SGS+ +A+ ALE + ++ LP +G S G + L+K+ A L+ + Sbjct: 142 LSKAVVVAQADIKSGSMQSAKLALELNKPLYVLPQRLG--ESTGTNLLLKENKAKLICDF 199 Query: 277 EEILENLQFG-LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 +E + ++ + + + ++ + ++ + Sbjct: 200 KEFVSEFASIDINQDEFLEFCKKGVSVDEALKIYGQKVYEYELEGKISIEGL 251 >UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2077 Length = 167 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 4/170 (2%) Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++SEF V PL +NF +RNRIISGL+ V+++EAA RSG+L TA AL QG++VFA+PG Sbjct: 2 IISEFQEGVEPLPFNFLKRNRIISGLADAVIIIEAASRSGTLNTATHALNQGKDVFAVPG 61 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + L+KQGAI T E+ILE ++ +N Sbjct: 62 NITSPLSAGCNALLKQGAIPATSVEDILE----VINLQNQENQNPSQISLPVGDTPLENA 117 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++ + V D + ++A + + T L LE+ G I + LR Sbjct: 118 IIELLNQGVRDGDELQKQAKAEISDFNTTLTMLEINGIIKPLGANKWCLR 167 >UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAK1_FERPL Length = 246 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 3/220 (1%) Query: 88 ATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 P L++ G + ++AV+G+R S G + L GV + SGLAR Sbjct: 28 ERRYAPKELYIAGSMKIPLPEPRVAVIGTRKPSPKGIEAASKITKVLVEHGVVVVSGLAR 87 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID VAHK A++ G +IAVLG LN +P + L ++++ A +S++P+ Sbjct: 88 GIDTVAHKTAIENGGKTIAVLGTPLNKFYPAENKPLQELIMKEHLA-ISQYPIGYITKPK 146 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 +F RNR ++ +S ++VEA SG + L GR +F + + ++ Sbjct: 147 HFVLRNRTMALISNASIIVEAGESSGVISQGWETLRLGRPLFFWKSLVE-KDFKWVREMM 205 Query: 267 KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 K GA ++ ++ ++ L + P++ D Sbjct: 206 KYGACVLQNVNDLKRAIREMLPPPAEIPKSELRVVDLSSF 245 >UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1VRI3_POLNA Length = 456 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 122/309 (39%), Gaps = 16/309 (5%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGE 101 + + QR L + ++ + ++ YP +L + P L+ GE Sbjct: 68 IEESRLQRLLGRGF-LLSQAIERWQARAIWVVSRADANYPRRLKERLRENAPAILYGCGE 126 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + L + LAVVGSR + A TI SG A+GID A + AL+ G Sbjct: 127 IGLLDAGGLAVVGSRHVDEALIEYTMTVGRIAARARRTIVSGGAKGIDQAAMRGALEAGG 186 Query: 162 VSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 VL + L + R H L L+E LVS + + +RN++I L+ Sbjct: 187 KVCGVLADSLEKTVMNREHRNL---LMEGQLVLVSPYDPSAGFNVGHAMQRNKLIYALAD 243 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN--PGSEGPHWLIKQGAILVTEPEE 278 LVV + L G T A+EQ ++ +P + + SEG L K+GA+ +P + Sbjct: 244 AALVVSSDLNKGG--TWAGAVEQLDKLRLVPVYVRSTGEASEGLEALRKKGAVTWPDPLD 301 Query: 279 ILEN---LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPV 335 + +S + V+ P +A D + +A Q V Sbjct: 302 ADSFQTVFEAITPVSETQVSAELFSSGEPPVSAP--AAMAVFPDAQPLLSAIAIAKDQSV 359 Query: 336 PEVVTQLLE 344 EV +Q LE Sbjct: 360 TEVASQTLE 368 >UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YRJ4_ANASP Length = 415 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 130/360 (36%), Gaps = 33/360 (9%) Query: 24 IAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIPA 77 + + +H+ L+Q ++ +R L+ + SL ++ Sbjct: 43 LLQQEMRPAHLLESTVKEQLKQLHISKLDPERLLALLARGAMLSLAVEKWTSRGLWILGR 102 Query: 78 DSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L P L+ G++ L LA+VGSR + R ET A Sbjct: 103 SDAQYPKLLKQRLKHSAPAILYGVGKIELLSQGGLAIVGSRDVDEELLAYTRKVAETSAL 162 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G+ + SG ARG+D A + L G S+ VL + L +++ +SL E AL+S Sbjct: 163 DGMQVISGAARGVDQEAMLSILNAGGTSVGVLADSLTKA--AVNSKYRSSLKEGRLALIS 220 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCALEQGREVFALPGPI 254 + D N RN+ I L+ LVV ++ + G+ A AL + +E +P + Sbjct: 221 SYDPDAGFNTGNAMGRNKYIYALADYALVVNSSFGQGGTWAGAVEALSRLKE---IPVFV 277 Query: 255 GNP--GSEGPHWLIKQGAILVT-------------EPEEILENLQFGLHWLPDAPENSFY 299 SEG L QGA + ++E++ + LP Sbjct: 278 RMAPTASEGNRQLHNQGAKPFPPEPWNGSLNKLLAKASSLVESIDTNIIQLPPEKSQDTQ 337 Query: 300 SPDQQ--DVALPFPELLANVGD--EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 S + + L +G + +A+ ++ L + G + Sbjct: 338 SHELSSTPQNIYEAVLPFILGHLQQPKDAKTLAQCLEVQPSQMQEWLKKAVQEGKVRKTN 397 >UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE53_9HELI Length = 269 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 29/270 (10%) Query: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 +F G L L ++A++G+R+ + Y ++ TL+ +G I SG A Sbjct: 22 KHLYKAFNGVFARGHLSLLKKPKVAIIGTRSPNQYAKQITTQLANTLSQKGFVIVSGGAI 81 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID +AH L N +I +L G++ I+P+ +A L + L Q G ++SE+ P+ + Sbjct: 82 GIDSIAH---LNANNNAILILPCGIDAIYPKENATLINN-LAQNGLVLSEYGGTYKPMKH 137 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 F RNR+I S +++ +A ++SGS +A A+ + +F LP + S G L+ Sbjct: 138 TFLERNRLIIAWSDIIIIPQADIKSGSSSSANLAITLQKPLFVLPHRLH--ESRGTQELL 195 Query: 267 K-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 + Q A + + E + N Y + +D L F D + Sbjct: 196 QAQKAQCIYDIESFV--------KNACEIHNIAYMQEIKDPLLEFAYNNGLFEDALKLFG 247 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + EL G I Sbjct: 248 DLV--------------FAYELEGKIKRNG 263 >UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID=B7JTA5_BACC0 Length = 284 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 7/186 (3%) Query: 92 YPGALFVEGELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G++ ++ ++A+VG+R S + I SGLA+GID Sbjct: 104 MPLFMYSKGDISLLEVNQKRVAIVGTRHPSQKAIAITKKLTRKFVEDNYVIVSGLAKGID 163 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 ++H+ A+ G +IAVL N I+PR + LA +L+ GG LV+ +F Sbjct: 164 TISHETAIVHKGKTIAVLPTNFNKIYPRENQELAKKILD-GGLLVTSIGPKENTYKSSFL 222 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S V+V E L+SG++ T R A E +++ + + + G Sbjct: 223 DRNQYLANISDIVVVTETNLKSGTMNTIRNASEASKKILFV----DQEDELINNKIRGFG 278 Query: 270 AILVTE 275 ++ + Sbjct: 279 GEMLND 284 >UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS39_9FLAO Length = 428 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 115/327 (35%), Gaps = 17/327 (5%) Query: 14 SSLYGDDMVRIAHWVAK----QSHIDAVVLQQTGLTLRQ----AQRFLSF--PRKSIESS 63 L + R+ W+ + + L + + R + + ++ Sbjct: 25 KPLSLLEWNRMVRWLQSKKLKPEDLLTIDLNKLLINWNDTTIPKNRIIELLDRKMALAIR 84 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + +I +FYP L P LF G+ + L+ + +VGSR S Sbjct: 85 LEKWSKAGVWIINRSDKFYPNSLKNKLKDRVPPILFGIGDKNLLNKNYIGIVGSRHISET 144 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + + + L + + SG ARGID + L+ NG ++ V+ + L + Sbjct: 145 DIKVTKDIVKQLYAQNYGVVSGGARGIDEHSMTGILECNGYALGVVADSLIKK--SSSSI 202 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 +++ L+S F +V N RN+ I LS+ +VV++ + G+ A L Sbjct: 203 YRKHIIDNKLVLISPFNPEVGFNVGNAMGRNKFIYILSQAAIVVKSETKGGTWEGANENL 262 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILV---TEPEEILENLQFGLHWLPDAPENSF 298 + + PI N ++G ++++G + I+ + + Sbjct: 263 KNNWAPLWVVKPIENKTNKGNFEIVRKGGRFLHEGFNVSNIINPKDKSIKAQGSLFNYNI 322 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVD 325 + V + + D Sbjct: 323 KIEESNIVNESEVKSIVIKSKTSLSPD 349 >UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis AR01/DG RepID=C7WQK9_ENTFA Length = 288 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 7/185 (3%) Query: 92 YPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G+ L ++A++G+R S + + G I SGLA G D Sbjct: 105 MPLFIYCKGDTSLLTKDKKRMAIIGTRHPSKKTIEITQKLTQKFVEAGFVIVSGLAEGTD 164 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 +AH+ AL+ NG +IA+L N I+P+ + +L+ ++E G L++ +F Sbjct: 165 TIAHETALKNNGKTIAILPTNFNKIYPKSNKKLSDKIVE-DGLLLTAIGPKENTYKSSFL 223 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S VLV E L+SG++ T R A E +++ + + + + + G Sbjct: 224 ERNQYVANVSDVVLVTETNLKSGTMNTIRNASEAAKKILFV----DQNDEKINNKIYEFG 279 Query: 270 AILVT 274 ++ Sbjct: 280 GEMLN 284 >UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SFU0_ACIJO Length = 433 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 119/402 (29%), Gaps = 64/402 (15%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTG------LTLRQAQRFLSFPRKSIESSLCWLEQPNHHL 74 + + S + + + + + L+ + + + + + Sbjct: 39 ARYLWKIGKQPSDLLSSDAKDLIEKCSNLINPERLNILLNRGF-LLSQVIELWQSRSIWV 97 Query: 75 IPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 I + YP + P L+ G L L+S LAV+GSR + + Sbjct: 98 ISRADKAYPRLIKDKLKDQSPPILYGFGNLDLLNSGGLAVIGSRKIDDSIYNYSNNIGKL 157 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 A G + SG A+G+D A AL G V+ L L+ Sbjct: 158 AAKFGTKVISGGAKGVDQAAMYGALHEGGYVCEVMAENLERAVLDAGR--RNYLMSGNLI 215 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 LVS + + +RN++I LS LVV + G T A EQ ++ +P Sbjct: 216 LVSAYDPKASFNIGHAMQRNKLIYALSDASLVVASDFNKGG--TWAGAAEQLDKLKFVPV 273 Query: 253 PIG-NPGSEGPHWLIKQGAILVTEPEEI-------------------------------- 279 + + S+G L K+GAI P++I Sbjct: 274 YVRLDNESKGLRELYKKGAIPWPNPQDINSFRQIFDVSNLANNNLNLSLFDQEDIVKEFK 333 Query: 280 ------------LENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 ++ ++ ++ N+ D + Sbjct: 334 VSDIAQQNLTNTIDESTKSHTPSATNTSEIEVQKPADELFEFAANIILNLLDTPLKDSEI 393 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRR 369 ++ + + L L I R + ++ R Sbjct: 394 SQALNISLAQTKLWLSRLVEEERIEK------RTKPVTYIVR 429 >UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AR88_DESPS Length = 428 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 115/363 (31%), Gaps = 31/363 (8%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL------ 64 S L D ++ W+ +LQQ + A + ++ +E+ L Sbjct: 23 SSTKPLSQGDYNKLVDWLISSGMRPKDLLQQENIDP--AAKGSGIYQQRLEALLGRGVQL 80 Query: 65 ----CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ +I YP + P LF G+ L LA++GSR Sbjct: 81 GFAVEEWQRNGIWIISRSDTDYPTRYKNHLGKQAPPLLFGVGDRSLLTGGGLAIIGSRNV 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 G + R A + + SG ARG+D + AAL G++I VL + L Sbjct: 141 DEIGGNFTREVGALCAQNRMPVVSGGARGVDQFSMTAALDAGGMTIGVLADSLLKK--SL 198 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA-LRSGSLVTA 237 ++ L+S + RN++I ++ LVV A + G+ A Sbjct: 199 ERTARKAIARGRLLLISACHPNARFTVGTAMGRNKLIYAMADYGLVVSAEHKKGGTWAGA 258 Query: 238 RCAL--EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 L E VF G P G L+ GAI + + + Sbjct: 259 DEELKREHSIPVFVRQGN-DVPL--GNSKLLGLGAIAWPDKVDHQNLRGQLTELSSQCAQ 315 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ--------PVPEVVTQLLELEL 347 S + A + + + E + V V +L L L Sbjct: 316 KSTQKNMSLLDFQERQKEPAKELPKAESI-ELTESSNVVEDTAAKHSVTTVYETVLPLIL 374 Query: 348 AGW 350 Sbjct: 375 EKL 377 >UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C392BE Length = 331 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 98/255 (38%), Gaps = 12/255 (4%) Query: 79 SEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YP +L P L+ G L L+ LA+VGSR + + + A + Sbjct: 1 DRHYPQRLKQHLKYLSPPILYGVGNLELLNKGGLAIVGSRNVNEAVLSYTQQLAHISAQQ 60 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 + + SG ARGID + L+ G +I VL N L + SL E AL+S Sbjct: 61 NIQVISGGARGIDKCGMLSCLEAGGTTIGVLANSLGKA--SLESDYRQSLDEDRLALISP 118 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCALEQGREVFALPGPI- 254 + + N RN+ I L+ +V+ A+ + G+ A AL +++ +P + Sbjct: 119 YDPEAGFHVGNAMGRNKYIYALADYAVVISASFNKGGTWSGAVEAL---KKLPNIPVFVC 175 Query: 255 GNPGSEGPHWLIKQGAILVTEPE---EILENLQFGLHWLPDAPENSFYSPDQQDVALPFP 311 N ++G L+K GA E ++L+ L+ G E Sbjct: 176 QNSQTQGNMELLKLGAKPFPEMSGKLDLLDILKPGETEDAVEVEQMALDFAVNLTPENPA 235 Query: 312 ELLANVGDEVTPVDV 326 V TP + Sbjct: 236 PTPIYVDVNPTPTEA 250 >UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VSY8_9CYAN Length = 426 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 14/263 (5%) Query: 24 IAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIPA 77 + + + L+ Q + +QR ++ + + SL ++ Sbjct: 43 LLEEHLNPADLLNSTLKNRLSQITINKLDSQRLIALLERGVMLSLAVEKWTNQGLWILGR 102 Query: 78 DSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L + P L+ G+ L LA+VGSR G + + A Sbjct: 103 GDADYPQCLKQRLKHNAPAILYGIGKRELLSQAGLAIVGSREVDQEGLNYTERVVQICAE 162 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 +G+ + SG ARG+D + L G ++ VL + L ++ A + E LVS Sbjct: 163 QGINVISGGARGVDQASMLGILAAGGNAVGVLADSLTKA--AVASKYRAGIKEGRLTLVS 220 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 + D A N RN+ I L+ LV+ +A+ G T A E R+V +P + Sbjct: 221 AYDPDASFSAGNAMGRNKYIYALADYALVISSAVGKGG--TWAGATEVLRKVQDVPVFVR 278 Query: 256 NPGS--EGPHWLIKQGAILVTEP 276 G+ EG L+++G I+ E Sbjct: 279 MQGTVPEGNQKLLEKGGIVFPEI 301 >UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQZ2_WOLSU Length = 259 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 30/264 (11%) Query: 95 ALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 ALF G+L L ++A+VG+R + Y + R + RGV + SG A G+D +AH+ Sbjct: 21 ALFYHGDLSLLKRPKVAIVGTRHPNAYTKAMTRELARFWSERGVVVVSGGAFGVDVLAHE 80 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRI 214 AA +I + + L+ +P H + + + G L+SE+ P Y F RNR+ Sbjct: 81 AAFPS---TILISPSSLDLPYPPSHKPIIERI-AKEGLLLSEYESSFMPKRYTFLERNRL 136 Query: 215 ISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILV 273 I LS +++ +A L+SGS+ +A A++ G+ ++ LP + S G L+ ++ A+ + Sbjct: 137 IIALSSLIIIPQADLKSGSMQSAHTAIKLGKPLYVLPHRL--KESLGTQSLLERELALPL 194 Query: 274 TEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 P+ +LE + + + +LL + + VA Sbjct: 195 YNPQTLLE---------------RHFPELAKPLKKSKDDLLLYAQTLPSYEEAVAR---- 235 Query: 334 PVPEVVTQLLELELAGWIAAVPGG 357 ++ E EL G I G Sbjct: 236 ----FGERIFEYELEGKILIKEGR 255 >UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma RepID=Q4A8B6_MYCH7 Length = 259 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 91/246 (36%), Gaps = 11/246 (4%) Query: 41 QTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG 100 L Q ++ L+ I E YP + P LF +G Sbjct: 15 DYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQG 74 Query: 101 ELHA--LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 ++ + + A++G + +S + + + + R + +T+G +G++ + Sbjct: 75 KIEFLENKNPKSALIGEKYNSK-IQEFFNKSLDQIIKRHILVTNGY-KGVEQKIMEYYRL 132 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 IAV NG+ P + + ++ ++SE+P RNR+++ L Sbjct: 133 YEAPIIAVSANGIENPWPFENFQHYKNI-----LIISEYPTGCNVNKKRLIERNRLVAAL 187 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFAL--PGPIGNPGSEGPHWLIKQGAILVTEP 276 + ++V GS L+ G+E++ G LI QGA +TE Sbjct: 188 ANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYAGCSDLIYQGANWITEI 247 Query: 277 EEILEN 282 +++ Sbjct: 248 KDVYYE 253 >UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YP58_9FIRM Length = 270 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 14/199 (7%) Query: 58 KSIESSLCWLEQPNHHLIPADSEFYP---PQLLATTDYPGALFVEGELH--ALHSFQLAV 112 + + + +I + +P + A D P LF +G++ + +AV Sbjct: 3 SQLTKEIEANTALD-GVICIFDQDFPVINSTVKAKGDRPYLLFYKGDISLLHHLNNNVAV 61 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +G + S ++ R L + I SGLA+G D +AH+ +++ G +IA+L + +N Sbjct: 62 IGHTSPSENIQKRERKIISQLVKKQQVIVSGLAKGCDVIAHEECMRLGGKTIAILPSSIN 121 Query: 173 TIHPRRHARLAASLLEQGGALVSEF--PLDVP--PLAYNFPRRNRIISGLSKGVLVVEAA 228 + P+ HA A ++E GG L+SE+ P P +A F R+R+ + +K V+++ + Sbjct: 122 EVLPKEHAERAKQIVETGGLLISEYYAPPSNPRFEMAKRFIDRDRLQAMFAKAVILIASY 181 Query: 229 L----RSGSLVTARCALEQ 243 SG+ AL+ Sbjct: 182 AVHKGDSGARHAMNKALKY 200 >UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W4_FRASN Length = 302 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 17/238 (7%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGA-LFVEG--ELHALHSFQLAVVGS 115 L + +P L T L+ G +L L + + G+ Sbjct: 70 DPARLLATATDAGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGA 129 Query: 116 RAHSWYGERWGRLFCETL----ATRGVTITS-GLARGIDGVAHKAALQVNGVSIAVLG-- 168 R S YG+ L A + VTIT+ G+ GID A + A + ++AVL Sbjct: 130 RLCSEYGQAVTAGLAYDLTTPLAAQPVTITAAGIGEGIDAAALRIA-ATHRRAVAVLTAT 188 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G+ + L + + GG ++ +PP + + R R+++ L++ ++VE+ Sbjct: 189 TGITRY----NRTLLTDVAD-GGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLVEST 243 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 R + TA+ A + R V A+PGPIG+ S GP+ L+ +G A LVT E+I L Sbjct: 244 TRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQ 301 >UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F7U3_HAEPS Length = 331 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 118/313 (37%), Gaps = 21/313 (6%) Query: 14 SSLYGDDMVR-IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 + + + + ++ + +L ++ ++ + +IE + L Sbjct: 17 NGIGDAWINKNLSKTKTSPLELIVELLAKSVKKETVSEEIFLQRKSNIEKQILLLGDSCD 76 Query: 73 HLIPADSEFYPPQLLATTDY--PGALFVEGELHALHSFQ--LAVVGSRAHSWYGERWGRL 128 ++ E +P A + P LF +G+L L +AV+G E R Sbjct: 77 GVVAIGDEKFPTHRGAVKESEQPNVLFYKGDLGLLSLENTNVAVIGVLTPDEDTEMDERK 136 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L + I SGLA+G D +AH L+ G ++A+L + LN I P +H A + E Sbjct: 137 IVSLLVQQDAVIVSGLAQGCDFIAHDQTLKFGGATVAILPSPLNNIMPVKHREFAQQIFE 196 Query: 189 QGGALVSEFP--LDVPPL-AYNFPRRNRIISGLSKGVLVVEAA-----------LRSGSL 234 GG L++E+ + + RR+R+ + S V++ + + SGS Sbjct: 197 TGGLLITEYYDAPSTKMELSSRYIRRDRLQALFSDIVILSASYTPNSVDPTALKIDSGSR 256 Query: 235 VTARCALEQG--REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +LE R V NP + ++K ++V +P + + L+ Sbjct: 257 HAMEKSLEYSIPRAVIYHEKYQRNPKYDLNRQVMKDAKVIVIDPTNPMPMITQILNLDKS 316 Query: 293 APENSFYSPDQQD 305 N Q Sbjct: 317 PSSNQESDDGQMG 329 >UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCQ9_9DELT Length = 297 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 114/260 (43%), Gaps = 21/260 (8%) Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 AVVGSRA E +RG ++ SG A GIDG AH+AAL +AVL G Sbjct: 50 AVVGSRAAHRAYLDCLPAVLELARSRGWSLVSGGALGIDGGAHQAALDRRVAQLAVLPCG 109 Query: 171 LNTIHPRRHARLAASLLE--QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 + +P RHA L ++L+ + G L ++ P+ P F RN I+ GL+ VLVVEA Sbjct: 110 RDQPYPSRHAALFTAMLDAPEAGLLFAQ-PVGTSPTRAMFASRNAIVVGLASAVLVVEAR 168 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP-----EEILENL 283 RSG++ T R AL +G + A+ G S G LI GA + P ++ L Sbjct: 169 SRSGTMGTGRLALGRGVPLAAVSG------SAGAGRLIAAGARGLPRPGGPTHRDLRAAL 222 Query: 284 Q-FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 F L + + L G +D A ++QL Sbjct: 223 DTFLGAALDPQRTIEEPTRPWPEALSDLRARLRAAGPRGLSID-----ACPDPEGTLSQL 277 Query: 343 LELELAGWI-AAVPGGYVRL 361 E EL G + A PG +V L Sbjct: 278 CEAELLGLVTEATPGRWVAL 297 >UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E615 Length = 322 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 19/267 (7%) Query: 52 FLSFPRKSIESSLCWLEQPNH--HLIPADSEFYPPQLLATT--DYPGALFVEGELH--AL 105 F K +++ + L E +P P ALF +G++ Sbjct: 52 LCRFNDKQAAILSELIKRKDVIDGLTTIVDEDFPIHRGTVKNSQKPVALFYQGDIRLLDP 111 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +AV+G + E+ + L ++ + I SGLA G D +AHK A+ G ++A Sbjct: 112 CKPSVAVIGLLDPDFSTEKSEISLVDELVSKNIIIVSGLANGCDAIAHKQAVIKQGKTVA 171 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL---AYNFPRRNRIISGLSKGV 222 VL + L+ I PR + LA ++E GG LV+E+ D + R+R+ + S V Sbjct: 172 VLPSSLHNILPRGNQSLAKEIVESGGLLVTEYMHDASSKLEFTARYQERDRLQALFSDAV 231 Query: 223 LVVEAALR------SGSLVTARCALEQ--GREVF-ALPGPIGNPGSEGPHWLI-KQGAIL 272 ++V + + SG+ + AL+ R V + NP + LI K I Sbjct: 232 ILVASYAKNNQGNDSGARLAMEYALQYDIKRAVMYNISIDSRNPKYDLNRQLILKDTNIH 291 Query: 273 VTEPEEILENLQFGLHWLPDAPENSFY 299 V +PE+ + L L + Sbjct: 292 VIKPEDTMCLAGNLLDKLITEKSKNIQ 318 >UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Bacteria RepID=A5UX61_ROSS1 Length = 454 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 87/238 (36%), Gaps = 7/238 (2%) Query: 64 LCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + ++ YP +L P L+ G L LA++GSR + + Sbjct: 88 VEKWVNKGLWVMSRSDADYPQRLKTRLGRTAPPLLYGAGNRQLLGQGGLAILGSRNSAAH 147 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + R A +G+ + SG ARG+D A +AAL GV I VL + L Sbjct: 148 ALAFTRRIAGMCARQGMPVLSGAARGVDSEAMQAALDARGVVIGVLADSLLKA--AVGRN 205 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCA 240 ++ LVS + N RN+ I LS LVV AAL G+ A Sbjct: 206 YRQAVRNGNLVLVSACDPEAGFTVGNAMGRNKYIYALSDYALVVSAALGEGGAWSGAVEN 265 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 L + + I + G L GA+ +E + E++ L D Sbjct: 266 LTKRWVPLFV--WIDDESLPGNQRLRDMGALPFSENQCAGESVHDLFKRLADETTPQH 321 >UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFY3_MYCFE Length = 247 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 19/230 (8%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + I+ L LE+ I A E +P L P LF +G + L+ + + Sbjct: 31 KKINQAEIDIVLKELEEKGIKYITALDENFPEILKNFRYSPYVLFYKGNIGLLNKKAVCL 90 Query: 113 VG---SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 G S ++ F E + + + +D + Q I VL Sbjct: 91 TGDIESPIVDINIKKSQNTFLE-----NYPLITNDFKNLDQKFVEIYRQNKKEIIHVLPY 145 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ + + L +S++P + F RN ++S L++ ++V + Sbjct: 146 GLD--YIKETINLDTE------LYISQYPPQTHAKLFRFKERNILVSFLAEFLIVYSSKS 197 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 SG L A +EV+ PG + +G ++LIK GA L+T+ E+ Sbjct: 198 DSGILSLATAFANNNKEVYCYPGLSYD---DGNNYLIKLGANLITQIAEV 244 >UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XN39_9HELI Length = 354 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 105/281 (37%), Gaps = 28/281 (9%) Query: 31 QSHIDAVVLQQTGLTL--RQAQRFLSFPRKSIESSLCWL---EQPNHHLIPADSEFYPP- 84 I+ + + + ++ + F + + L + E +P Sbjct: 25 IEEINKLNKKIEEINKLNKKIEEIKKFDFNNEMEEIGNLLDNSKEGIRYTAFGDEDFPEC 84 Query: 85 ---QLLATTDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 ++ D P L EG+L + ++F +AV+G + ++ + + T Sbjct: 85 RFERIENKNDLPVFLAYEGDLKLLSKNNFNIAVIGILEPTEEIKQLEKEILGEILKYDAT 144 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ-GGALVSEFP 198 I SGLA G D +AHK+ N +IA+L + L+ I P+ + LA+ ++ G L+SE+ Sbjct: 145 IISGLALGCDTIAHKSVSDQNC-TIAILPSTLDNILPKENRELASEIVRNKNGLLISEYY 203 Query: 199 LDVPPLAY---NFPRRNRIISGLSKGVLVVEAALR----------SGSLVTARCALEQG- 244 + + +R+R+ + S V++ + SGS A + G Sbjct: 204 KEAENKFEYINRYIKRDRLQALFSDMVILTASYSEKDSKRDKKKDSGSRHAMGKAKDYGI 263 Query: 245 -REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 R V + LI + E+++ Sbjct: 264 KRAVMYDETIFDDEKFNLNRELIAMKMSIAKLDEQVIMEFN 304 >UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pulmonis RepID=Q98Q22_MYCPU Length = 244 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 102/279 (36%), Gaps = 36/279 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+ L I+ I + + + + +++ S Sbjct: 1 MN--EVLLYFSFINK-------------GNTKKIFESLKKHEQIDPVELKKYKSM----- 40 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 LE+ + I S YP + + P LF +G L L + ++A+ G S Sbjct: 41 ------LEENSIKYITILSSKYPEEFKYLNNPPFILFYKGNLDLLKNTKIALSGD-VVSQ 93 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 F E + + T+ + G D K +Q + I + NGL+ + + Sbjct: 94 KNLDLLDDFVENM--KNETLVTLNFPGFDDEVVKKFIQKDLKVIFLAANGLDNPYFSQKE 151 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L+S +P +V R+ I++ L+K ++ E S SL Sbjct: 152 FDFEK-----NLLISIYPPEVGVKKERLQSRSEILASLAKYLVFFEFKKNSKSLHLVNFF 206 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 LE G+ ++ P N G + LIK+GA L+T ++ Sbjct: 207 LEMGKMIYCYPTDNFNEF--GNNDLIKEGAKLITHYSDL 243 >UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BQ27_VEIPT Length = 315 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 19/203 (9%) Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT--DYPGALFVEGELHALH--SFQLA 111 + W++ + +P + D P LF +G+L L + +A Sbjct: 52 DLSVAVDDMDWMD----GAVCCFDAEFPVINESVPKGDRPYLLFYKGDLSLLRDLNRNVA 107 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 V+G + E L G I SGLA+G D + H + G +IA+L + L Sbjct: 108 VIGYTTPNEALIARESKIVEHLVHHGQHIVSGLAKGCDAIGHTVCMDCGGKTIAILPSPL 167 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN-----FPRRNRIISGLSKGVLVVE 226 N I P H +A ++E+GG ++SE+ P + + + R+R+ + +K V+++ Sbjct: 168 NAISPADHRDMAHQIIEKGGLVISEYYNG--PRSRHEAINRYVERDRLQALFAKAVVLIA 225 Query: 227 AALR----SGSLVTARCALEQGR 245 + SGS A G Sbjct: 226 SYEGRDGDSGSRHAMGKAHSYGH 248 >UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTA5_9DELT Length = 233 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 17/203 (8%) Query: 83 PPQLLATTDYPGA--------------LFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 P + P ++ G L L+ GSR S G Sbjct: 2 PTLRKTISPLPPISVREIFLKNGKAQKIYCMGNLKLLNIPGAGFCGSRKVSPAGISVAED 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 +A G + SG A G+D AH AAL G ++ VL G++ R +A Sbjct: 62 CAVQIAQSGYPVISGYAAGVDMTAHTAALAAGGTTVIVLPEGIDHF--RIKKEIAEFWDW 119 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 ++S F ++ Y RN +I LS+ ++V+EA + G+L +L+ +F Sbjct: 120 NRILVISPFDPEMRWTVYRAMGRNHVIVALSRAMIVIEAGEKGGTLAAGLASLKAQCPLF 179 Query: 249 ALPGPIGNPGSEGPHWLIKQGAI 271 + + + G L+++G Sbjct: 180 VVDYGEND-YAVGNRVLLQKGGR 201 >UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A5L4_MYCS5 Length = 246 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 87/229 (37%), Gaps = 15/229 (6%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH---SFQL 110 + I+ + + I YP L P L+ +G ++ L+ +L Sbjct: 28 KLRKSEIDEITNIYLKNDIKFISIFDLNYPSSLFMVHYPPFVLYYKGNINLLNDLTKKRL 87 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +V +S Y + TL + +T+ A + N I + G Sbjct: 88 YLVDE-MNSEYSKEILSKNIRTLTENSILVTNSYAS--EKHLIDEFKNANASIIYIAKEG 144 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L ++ + + ++S++P+D P NF + N + + ++ +++ + Sbjct: 145 L-------NSSKFDDINLENNLIISQYPIDDHPRKINFRQSNVLSAAIANSLVIFSSYKD 197 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 S L G+++ PG + +G + LI+ GA L+T+ + + Sbjct: 198 SKVNNLVSEFLNLGKDINCFPGSLDEK--DGNNHLIQSGANLITQIQAV 244 >UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZJ44_9GAMM Length = 166 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%) Query: 10 LMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L S+ L + + + + + L+Q Q Q + ++ I+++L W Sbjct: 3 LDSVPRLPKRLLFSLLRRHNIDQLDTLSYSQLRQYKFNDAQIQSLKNPNQQKIQANLDWQ 62 Query: 68 E-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 N ++I D YPP L ++ P L+++G++ L Q+A+VGSR+ + YG++ Sbjct: 63 NVDQNKYIIAFDDPSYPPLLKEISNPPLLLYLQGDITLLLKPQIAIVGSRSCTLYGQQKS 122 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 F + L+ G I+SGLA G+DG AH+ AL Sbjct: 123 YQFAQQLSKAGFVISSGLAMGVDGFAHQGALDA 155 >UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mobile RepID=Q6KHR8_MYCMO Length = 240 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 87/249 (34%), Gaps = 17/249 (6%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW---LEQPNHHLIPADSEFYPPQLLA 88 I ++ G + + + IE + W LE ++ + YP Sbjct: 3 EIIIYFSIKYQGDYFKIKNALIKMEKIDIEKLIQWNKKLENNKIKVLTKFDQTYPNSFKN 62 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P A+F +G + L+S ++ +VG + + T+ S + Sbjct: 63 IKYSPYAIFYKGNIDLLNSEKIMLVG--DSFEKSYEDIENSLHPIILKK-TLLSLGFKNF 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL-LEQGGALVSEFPLDVPPLAYN 207 D + NG I+ NGL + + + L ++SE+P + Sbjct: 120 DEKIYNLFKNNNGKIISFSANGLIDQY------MFNEIDLNLNNLIISEYPFKINLSKRK 173 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 +RN + S LS +++ + S L G+E+F P + G L+ Sbjct: 174 LFKRNYLSSILSDFLIIYNSEKNSKLFNLINFFLNSGKEIFCFPPKGDD----GNLILLN 229 Query: 268 QGAILVTEP 276 GA VT+ Sbjct: 230 DGANFVTKI 238 >UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5U6_DESRM Length = 192 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 106 HSFQLAVVGSRAH-----------SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 + +A++G R + A + V + SGLA GID AH Sbjct: 11 NKEIIAIIGPRRPIKGSSASEILQHQRDCDIAYHLAQQAARKDVVVLSGLATGIDTAAHL 70 Query: 155 AALQVNGVSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 L G+++AV+ GL+ I P + L ++ +GG +VS+F P + F R++ Sbjct: 71 GCLDAGGITVAVVPFGLSAPISPAENRSLFHQIVHKGGCIVSQFKPKQPAAKWTFIVRDK 130 Query: 214 IISGLSKGVLVVE-----AALRSGSLVTARCALEQGREVF 248 + LS ++VV + G+ A + G+ +F Sbjct: 131 TQAELSSKIVVVGTFPPNGLIVGGTRHCALWGRKMGKPLF 170 >UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter pasteurianus RepID=C7JES2_ACEP3 Length = 214 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 85/204 (41%), Gaps = 46/204 (22%) Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 A +FPRRNR+I+GL G +VVEAA SG+L+TAR ++ GRE+FA+PG +P G + Sbjct: 3 ARHFPRRNRLIAGLGLGCVVVEAAPHSGTLITARMVVDYGRELFAVPGSPLDPRCRGSNN 62 Query: 265 LIKQGAILVTEPEEILENLQFGLHW--------------------------LPDAPENSF 298 L++ GAIL +IL +L + LP E Sbjct: 63 LLRNGAILTESVADILPHLPPVIPQSAGSTVSLPSISAPRQKKSVSPPQTGLPFVSEPPE 122 Query: 299 YSPDQQDVALPFPE--------------------LLANVGDEVTPVDVVAERAGQPVPEV 338 + + E LL+ + VD + R V Sbjct: 123 RAFFASPQNVDEKEPIALKPHFSAASTAQDVRENLLSLLSFTPIAVDDLIRRCQFSASAV 182 Query: 339 VTQLLELELAGWIAAVPGGYVRLR 362 + L ELEL+G ++ GG V L Sbjct: 183 LVALTELELSGCVSTYSGGMVGLA 206 >UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D330_9BACE Length = 381 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 13/238 (5%) Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSE-FYPPQLLATT-DYPGALFVEGELHALH-SF 108 + + L + + +E YP +L P L G+ L Sbjct: 64 LPADLLEEAGRILARQQAMGIRTVSFLNEMSYPCRLNELDIFRPILLHGMGDWSLLDMQP 123 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLA-----TRGVTITSGLARGIDGVAHKAALQVNGVS 163 ++V GS S R + + + LA D A + L +G Sbjct: 124 LVSVTGSPQASPQDVSIAREWGKKYGSGHDGQESCIVVGRLADACDVAAMEGCLDADGHV 183 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 IA++ G + + L ++++GG ++S P P R+++ L + ++ Sbjct: 184 IAIMEVGFDGV---AMEALCRRIVDEGGLVISTKWFGTPSGRNLCPC-ERLMAALCEQMI 239 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 VVE + S+ + A + GRE+ + + + EG ++ V + E I E Sbjct: 240 VVECQQQDESMTVVKEARKLGREIHCMKPIMHDISMEG-IQVLPDKKTTVKKCERIFE 296 >UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=2 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKC7_FERNB Length = 374 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 104/299 (34%), Gaps = 27/299 (9%) Query: 1 MVDTEIWLRLMSIS-SLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M + + L I +L + + +I + A +++I + + + Q SF ++ Sbjct: 1 MNNEATCV-LSLIRTNLTKEKINKIIN-FASENNI--SISKVLKFDESKFQELFSFSKED 56 Query: 60 IESSLCW-------------LEQPNHHLIPADSEFYPPQLLA---TTDYPGALFVEGELH 103 I+ L + +LI E YP +L + P LF +G Sbjct: 57 IQEVLKAKDNLGNSSFLLEDITSKGIYLITVLDEEYPKKLKENLSIDELPPMLFCKGNTD 116 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L+ +++VGS+ + + + + A G + SG + ID ++ + G + Sbjct: 117 LLNEKHISIVGSKNANEISIEFAKNITKKAAKNGQVVVSGYEKTIDKAIIESTINNGGRA 176 Query: 164 IAVLGNGLNTI-HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 I +L G+ P + + ++S + + +I + Sbjct: 177 IILLSQGILLFQIPNEYYEYYT---DGNILILSIYTPNSKWDNNKTIETEKIKFAFGDEI 233 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 + + + A++ E + P + LI +G V EILE Sbjct: 234 YIADIKHEDEIWNST-VAIKNKTENIFVRQPEDTEDTA-NLELINKGLKAVNIIGEILE 290 >UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma florum RepID=Q6F0T0_MESFL Length = 259 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 17/261 (6%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + + ++ I + YP L P Sbjct: 5 LLYFSLKYHGDWEKIYDALDRKEKIETQDLIKVPNSIPNNFISIINPLYPNNLKQIMKPP 64 Query: 94 GALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 L+ G + L + + + S Y + + E L TI D Sbjct: 65 FILYYLGNISLLQNYFQTIFINSSDNIDEYNFKVIKQVVEDLIKENRTILLSCENSQDNK 124 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF-PR 210 ++ G I V L + ++ ++SE+ + NF + Sbjct: 125 LLDFIIEKQGKLIVVTKEPLQSFLNSESWAKHKNIEYYDFIIISEYE-----ESNNFKYK 179 Query: 211 RN--------RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 N RII+GLSK ++ +E + L + + FA+P + + S Sbjct: 180 SNNNKEEMNIRIINGLSKAIIFLEHSNFKKIEPLFNAVLNENKPYFAIPQNLKDTESS-S 238 Query: 263 HWLIKQGAILVTEPEEILENL 283 + L+K GA L+ +IL + Sbjct: 239 NNLLKNGAKLLESATDILNQI 259 >UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W2_FRASN Length = 283 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 20/241 (8%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFV--EGELHALHSFQLAVVGSR 116 + L LI +P L P AL+ G L L + +AV G+R Sbjct: 49 DPDQLLDAHAALGWRLICPGDHDWPTSLTPAGPAPLALWAHGHGHLAVLAARAVAVTGNR 108 Query: 117 AHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + + G LAT VT+T+ L+RGI A AA+ ++A+L L T Sbjct: 109 SATPAGLSTAARLAHDLATASPPVTVTATLSRGIARAALTAAVPH-APTLAILVGDLLTD 167 Query: 175 HPRRHARLAASLLEQGGALVSEFP----LDVPPLAYNFPRRN----RIISGLSKGVLVVE 226 H L A++ G +VSE P PP + RRN R+++ L++ LV+E Sbjct: 168 R-APHPELLAAVAAT-GLVVSEIPPLWEPATPPTTRDRGRRNTARARLLATLTQATLVLE 225 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG--AILVTEPEEILENLQ 284 +A + TAR A GR + +P GN + + +G A VT +I +L Sbjct: 226 SAPGGAGIATARAARALGRPLLTIPTLGGNGDAA---RALLRGRLASPVTTAADITAHLP 282 Query: 285 F 285 Sbjct: 283 H 283 >UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J800_MYCHP Length = 252 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 84/283 (29%), Gaps = 36/283 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E L I++ +I + + Q Q ++ F Sbjct: 1 MNKEEYLAYLSYINNG---KWHQIYNDLKSQ-------------ITCQKTKYADFCSDQA 44 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 N I YP + P L+ G L + + G+ + S Sbjct: 45 IK--------NKSYITIFDSDYPLYCNNVWNPPFVLYYYGNKQLLKHKIIMITGNISISN 96 Query: 121 YG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + F + +G+D + N I +L G+ Sbjct: 97 IIEVKDSIENFSKEYVFCNEAW-----KGLDIQLIDYLISKNKNIIIILACGIEYAKNSL 151 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +SE+P + RNRI + +S ++++ +S Sbjct: 152 PKKWFDY---SNLLFISEYPSNYHTSKITLKARNRISAAISNYLVLLSC-YKSTMNNLID 207 Query: 239 CALEQGREVFALPGPIGNPGSEG-PHWLIKQGAILVTEPEEIL 280 L G+EV+ L N + LI +GA +T +++ Sbjct: 208 QFLNIGKEVYCLDDTQNNLNEDNFNKNLINEGAGKITSITDLI 250 >UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W3_FRASN Length = 283 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 91/252 (36%), Gaps = 17/252 (6%) Query: 49 AQRFL-SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHAL 105 +R +P L + L+ +P L P L+V G +L L Sbjct: 37 WERIAGRYPDIDPGRLLEQATESGWRLVIPGDPDWPATL-DVPGRPLGLWVHGAGDLPGL 95 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATR----GVTITS-GLARGIDGVAHKAALQVN 160 + + G+ A S YG L T+ VT+ + G G D A AA + Sbjct: 96 LRRAVTLTGALAGSAYGRTVAADLATKLTTQPGGESVTVVAHGGGNGTDVAALTAAARRP 155 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 L+T + GG LVS D P + R +++ L+ Sbjct: 156 AA-----VAVLDTPTDLFGQPDLLRTVAAGGLLVSAAAPDANPTPGHVLARIELLAALAH 210 Query: 221 GVLVVEAALR-SGSLVTARCAL-EQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPE 277 +++EA +L A A + R V A+PGPI S GPH L++ G A VT Sbjct: 211 ATVLIEARASDDDALSVAYTAHFRRRRPVLAVPGPITALASAGPHALLRDGTARCVTTAG 270 Query: 278 EILENLQFGLHW 289 I +L Sbjct: 271 HITAHLPDPPAP 282 >UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B148 Length = 341 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 96/282 (34%), Gaps = 16/282 (5%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIE--SSLCWLEQPNHHLIPADSEFYPPQLLATT-D 91 + Q GL A++ + + +L LE N + E YP L Sbjct: 63 YDTLTQIIGLDAFTARKIEKRQKLLPDLFYALQNLESQNIGVTTIYEEDYPACLRVLGSK 122 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P + G+L + ++V G + + + + ++ G T+ G ++G++ + Sbjct: 123 MPLVISYIGDLSLSYGVNISVAGPQVMNKTMRHVTKEIMKKVSKEGYTLVVGGSKGVEEL 182 Query: 152 AHKAALQVNGVSIAVLG-NGLNTIHPRRHARLAASLLEQGGALV-SEFPLDVPPLAYNFP 209 A + L NG ++ + + + I RL + L+Q L+ S + Sbjct: 183 ALRTHLTNNGNAVLFVADHMFDKI------RLYSKYLKQNKLLIMSANDPYALFDVTHAL 236 Query: 210 RRNRIISGLSKGVLVVEAALRSG-SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 +N I G+ +V + SG T+ + + + G LI+ Sbjct: 237 DKNLYICGMVFAQVVTGTHIGSGPVWFTSIQNIHSHWTRQLVYETLD---YSGNIRLIEM 293 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPF 310 G T+ E++ ++ P + + Sbjct: 294 GEAHFTD-EDLKSDVTLAEVLDNHETIIKKDDPSIDQMTIFE 334 >UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax=Bacteria RepID=C3RR84_9MOLU Length = 332 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 93/269 (34%), Gaps = 13/269 (4%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL-LATT-DYPGALFVEGE 101 + + A+R + S L LE ++ + +P L P +F G Sbjct: 71 IAYKMARRIETM--NIFLSVLNNLEGNGINVTTKYEDNFPKLLTKHLKKRAPLYVFYCGN 128 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + ++++G + + + + + S A+GID VA AL Sbjct: 129 IELVGE-GISLMGLNKVTKKDRAYTKRLVDKAIEDNLIYISNDAKGIDDVALHYALYHGC 187 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 I+ + L + + ++S + N RN + LSK Sbjct: 188 HCISFVCERLG----AKSKDYTRYIKSGQLVMLSAEDPNCYFDVTNAIERNSYVCALSKY 243 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 ++V +++ +G+ T +L+ + P + G L+ G + +++L Sbjct: 244 QIIVSSSINNGA--TWFTSLQNLHNKWTTPLAVEG-LYLGNDRLLDMGVTPIY-IKDVLS 299 Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPF 310 + F + + + + +++ Sbjct: 300 DYSFDMIYDRNKKIVEDAEVNIDQMSIFE 328 >UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX88_STRM9 Length = 269 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 97/283 (34%), Gaps = 23/283 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 W+ L I L D V I H + L + L ++ + Sbjct: 3 WINLSRI--LKEDICVEIMKRYDNIFHAIDDFKKYD-LNKTILYKLLKAAKEDDIYYINK 59 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR----AHSWYG 122 + N +I + YP +L+ + ++++ + + S ++ Sbjct: 60 CREENIKIISFKDKNYPKKLIQSGFIFPYIYLKTNIDINKLENILAFSSNYDLIENTKKI 119 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + ++ +T A D K I + N + + ++ L Sbjct: 120 LDNTLDLNDNISLS--LVTETDA---DKYIQKKFSSKKNNMIYI--NSRDFKYIPKYYDL 172 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + L+S P + N + +++G+S + + E+ L S +++ ++ Sbjct: 173 DKDV------LISMSPFEDFRSKNNILKSTCLLAGISDYLYIPESFLTSRAMILSKIMNS 226 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ 284 G+E+FA G +++++ A LV ++I + + Sbjct: 227 MGKEIFA--STSYGNRYLGCNYILRNNIAKLVMSKDDINKEVN 267 >UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM92_MYCA5 Length = 258 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 88/263 (33%), Gaps = 44/263 (16%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE 80 +I H ++D + +Q R ++ +I + Sbjct: 16 WDKIYHAFKNFENVDDDL-------AKQIARERIDLKE--------------KIITILDD 54 Query: 81 FYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 YP +L P AL G ++ + G+ Y ++LA V Sbjct: 55 EYPAKLDMLRKPPFALHYLGNYSLINFEKSFCLTGNLEK-DYIVDLLCHI-DSLAK-DVL 111 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL---LEQGGALVSE 196 + +GI+ + L + + + GL R+ + + ++SE Sbjct: 112 VVLPSWKGINEKILEKCLTNDQPILVISKCGL------RNEPFLEKIDFAKHKNVLVISE 165 Query: 197 FPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSL--VTARCALEQGREVFAL-PG 252 +P F R RI++ L+ ++++ SG L+ G+EVF P Sbjct: 166 YPNKYHISRKTIFAYR-RIVAALANNLVLLAT---SGPFLNNLVNNFLDCGKEVFCFAPE 221 Query: 253 PIGNPGSEGPHWLIKQGAILVTE 275 P N S LI GA L+ + Sbjct: 222 PNDNENS--NLELINLGATLIND 242 >UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHW3_RHOM4 Length = 297 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 82/243 (33%), Gaps = 17/243 (6%) Query: 24 IAHWVAKQSHID----AVVLQQTGLTLRQAQ--------RFLSFPRKSIESSLCWLEQPN 71 + V + + G + FL ++ ++ L L Sbjct: 25 LVRHVGSFEALSSQPPEALRNHLGHRPEGIRLLAQLSNAAFLQKMQEQAKAELATLITKR 84 Query: 72 HHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 ++ + +P L A P LF G L L +A++ S + Sbjct: 85 IRVLTPHDDVWPAGLEALPEHQRPFLLFAYGNLELLAQPTVALLARPPISDAAYDRAQDL 144 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNG--VSIAVLGNGLNTIHPRRHARLAASLL 187 L G +G G D K +I V GL+ + P +AA+ L Sbjct: 145 TLHLIEAGCVPVTGALSGFDVALQKLCHNAPRPHPAIMVAHTGLSQLLPPM-RPVAAATL 203 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GG L+S F +++ P +R + + L++ + VE + + A++ R V Sbjct: 204 RAGGLLLSPFLMELRPSDRRDRQRALVQAALAQAAVFVEPRDETPEHMALDWAVQAHRPV 263 Query: 248 FAL 250 F + Sbjct: 264 FGI 266 >UniRef50_Q14PF7 Hypothetical dna processing protein smf n-terminal truncated n=1 Tax=Spiroplasma citri RepID=Q14PF7_SPICI Length = 189 Score = 98.4 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 23/200 (11%) Query: 88 ATTDYPGALFVEGELH--ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 P LF G L +LA+ G+ + G ++ + + + +T+ Sbjct: 3 NIYRPPFVLFYVGNLAVLNDQRHKLAICGTTVPNKRGLVTAKMLTKKILKQKITLIVTSE 62 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG-----ALVSEFPLD 200 G++ K NG SI +L ++ + +Q ++SE + Sbjct: 63 AGVNECVVKNL--GNGSSILIL----------KNLNDYKQITKQYPNTKFQIIISEAYQN 110 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 + I+SGL GV++V++ L + A G+EVF P I Sbjct: 111 SVNKSQYELY--LIMSGLMDGVVIVQSTLDDETHRIVTLAKHDGKEVFCFPAQITVANK- 167 Query: 261 GPHWLIKQGAILVTEPEEIL 280 + IK GA LV ++I Sbjct: 168 -NNGFIKNGAQLVENVDDIC 186 >UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium Ellin514 RepID=B9XI03_9BACT Length = 105 Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 5/101 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E + L I + + ++ I + QQ G+ A+ ++ Sbjct: 1 MDSREALVALNMIDHVGPVRVRQLLEQFGNAPAILSASKQQLMRVRGIGEETAECIANWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGAL 96 + + L + H++ + YP L D P Sbjct: 61 KSIDLAGELKRITDYGCHVLTQADDEYPELLRQIYDPPFVF 101 >UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTB7_ROSS1 Length = 215 Score = 87.6 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 5/186 (2%) Query: 71 NHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 N + YP L P +F+ G L L + S Sbjct: 2 NIERLHIRDTAYPVALRERLGKRAPEHVFLLGNPELLQYDPLGLFCSTKCPGNIILKTYD 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L V + G ++ L+ I GL + P + + Sbjct: 62 LARALRDARVPVIGGFHTPMEKECLAVLLRGPQPVIVCPARGLEGVRPV--TEVRDGIRA 119 Query: 189 QGGALVSEFPLDV-PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 LVS F A +RNR ++ L+ V AA + R + G+ + Sbjct: 120 GRVLLVSIFAPKQRRATADLADQRNRFVAALASRSFVSHAAPGGKTEALCREMIAMGKTL 179 Query: 248 FALPGP 253 F + P Sbjct: 180 FTVDAP 185 >UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquificales RepID=C0QTX6_PERMH Length = 146 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 40/181 (22%) Query: 108 FQLAVVG----SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 Q+ V+G +R Y + + LA G + G G+ K A + G + Sbjct: 2 KQVTVIGGSQVNRNSDEYI--FAYKLGKLLAENGCIVVCGGRTGVMEAVCKGAKESGGTT 59 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + ++ + + A + G + +N RN I+ V+ Sbjct: 60 VGIMPS-----YEGYEANPYVDIKINTG------------MNWN---RNPIVVASGDPVI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V G+L A G+ V H + +G I V +PE++LE L Sbjct: 100 AVGGNY--GTLSEIAYAFILGKRVLGYK----------THKI--EGIITVNKPEDVLEFL 145 Query: 284 Q 284 + Sbjct: 146 R 146 >UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding protein n=6 Tax=cellular organisms RepID=Q8TVJ9_METKA Length = 157 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 23/175 (13%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q++V+GS S +A RG + G G+ A + A + G+++ +L Sbjct: 2 QISVIGSGRASEDVLNLAEELGREIARRGHVLVCGGRGGVMEAACRGAREEGGITVGILP 61 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 E + P + RN ++ V+ V Sbjct: 62 G--------------ERRDEANPYVDVVIPTGLGE------ARNALVVRAGDAVIAVAGG 101 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G+L A + G+ V L G E +GA E E E L Sbjct: 102 W--GTLSEISLAKKMGKPVVGL-TSSGGWAEELARRGEIEGAESPEEAVEKAELL 153 >UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Y3_PELCD Length = 154 Score = 84.9 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 35/178 (19%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + V+G+ + + G GR +A + G GI A + A + G ++ Sbjct: 1 MRQPIIGVIGAASVAAAGYETGRQVGRLIAEANAVLVCGGLGGIMEAACRGACEAGGQTL 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVL 223 +L ++ P PL N RN II+ ++ ++ Sbjct: 61 GLLPGP-------------DAVAAN--------PWVTLPLPTNLGHARNVIIAHTAQALI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 VE G+L L+ G+ V AL P G I T P E +E Sbjct: 100 AVEGEY--GTLSEMAIGLKLGKPVVALDSWPDLP-----------GVIYATNPAEAVE 144 >UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=spotted fever group RepID=Q92IH0_RICCN Length = 111 Score = 84.1 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 45/62 (72%) Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA+L+SGSL+TA+ ALEQ R +FA+PG +P +G + LI++GA LV ++I+ NL Sbjct: 2 VVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANL 61 Query: 284 QF 285 Sbjct: 62 PQ 63 >UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEG1_MYCFE Length = 177 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 34/179 (18%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSF---PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 I + + G + + ++ + I+ L L+Q I A + +P L Sbjct: 16 ELIIYLSWKYEGNIWKIYEFLKTYKTVAQAKIDEVLNELKQKGIKYITAFDDNFPEILKN 75 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P LF +G + L + + + + + TS ++G Sbjct: 76 YRYSPYVLFYKGNIKILKLLE---------TQNKNEVFIEW--DFENKKILFTSLNSKG- 123 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 I +L G N L + + +++FP P N Sbjct: 124 -----------KSKIIYILDCGFNH--------LNKKINYKKELYITQFPFQTLPSKIN 163 >UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermoplasmatales RepID=Q6KYW1_PICTO Length = 167 Score = 82.2 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 62/174 (35%), Gaps = 30/174 (17%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 + ++G Y E LA + + + G GI K NG+ I +L Sbjct: 5 NIGIIGGSHTDDYYCSIAYKVGELLAKKNIVVICGGKEGIMECVSKGVSDNNGIVIGILP 64 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G + E L P + RN +I S ++ +E Sbjct: 65 -GNDKT-------------EGNRYLTIAMPTGIG------YMRNFLIVRASDALIAIEGF 104 Query: 229 LRSGSLVTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 SG+ A A+ +G+ V ++ I ++G LI+ ++PEE +E Sbjct: 105 --SGTTSEAAFAISEGKTVVSIGDLDIKRKETDG--KLIR-----ASDPEEAVE 149 >UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M7_9DELT Length = 161 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +++V+G+ RL LA G I G G+ + A + G +I +L Sbjct: 7 RRVSVIGAGTCDAAVYEAARLLGRLLAGHGCDIVCGGLGGVMAGVCQGAREAGGRTIGIL 66 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 + +VP + RN ++ V+ + Sbjct: 67 PG--------------DDPAAANPFV------NVPIVTGMGIARNVLVVKNGDAVVALSG 106 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 G+L AL+ GR V AL Sbjct: 107 GA--GTLSEIGLALKLGRPVVAL 127 >UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota RepID=O29139_ARCFU Length = 151 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 34/177 (19%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + Q+ V+G+ R E +A +G + +G G+ + K A G+ + Sbjct: 1 MKLMQIGVIGAGECDEETYRIAYRVGELIAEKGHVLINGGLGGVMEASAKGAKSKGGLVV 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 A+L R L + + RN II S ++ Sbjct: 61 AILP---------RKKDLCNDFAD------------IRIATDMGHARNVIIVHSSDALIS 99 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 V G++ AL++G+ V +L P+ + +G + PEE + Sbjct: 100 VGGGY--GTISEIAIALKEGKRVASLKPPV-----------VIEGMRVFETPEEAVN 143 >UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SBE4_FERPL Length = 149 Score = 80.3 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 22/149 (14%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+ V+GS E LA R I +G G+ + A + G + ++ Sbjct: 4 QVGVIGSGDCYEDVCEIAERVGELLAERKCVIINGGLFGVMEAVSRGAKRKGGFVVGIVP 63 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 + A ++ RN II S ++ + Sbjct: 64 G-----KSKEEANKYCDIV---------------IATNMGHARNMIIVHSSDVLIAIGGG 103 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNP 257 G++ AL++G+ V + P+ P Sbjct: 104 Y--GTISEMAIALKEGKRVVGIKTPVKLP 130 >UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root RepID=Q3IU16_NATPD Length = 153 Score = 80.3 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 54/178 (30%), Gaps = 34/178 (19%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV--SIAV 166 +++V+G + +TLA G T+ G G+ + A +I + Sbjct: 2 RVSVIGGSSVGDESAAIAESVGQTLAEHGHTVVCGGLGGVMEAVCRGAHNAEPPAETIGI 61 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L + P RN ++ V+ V+ Sbjct: 62 LPG-------------RDRTAAND-------WVTTPIATGLGNARNVVVVRNGDAVIAVD 101 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 A G+L AL+ GR V L H + G V P E +E ++ Sbjct: 102 GAA--GTLSELGHALDLGRPVAGLR----------THDIELDGFQPVETPTEAVEYVE 147 >UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Burkholderiales RepID=Q123Q1_POLSJ Length = 168 Score = 78.0 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 41/179 (22%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R L G+ + SG G+ A + A + GV+I +L Sbjct: 28 GTREC-----EAAYRIASLLGRAGMAVVSGGRGGVMEAASRGAFEAGGVTIGILPEEDTR 82 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + L+ ++ P + RN +I+ S ++ + + G+ Sbjct: 83 C---ANRYLSVAI-----------PTGIGE------MRNALIARSSICLVAIGGGM--GT 120 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 + L+ + VF+L I PG V +I + L++ WL Sbjct: 121 ISEMALGLKWEKTVFSLYEDIQLPG--------------VQTARDIDQLLEWVAAWLVC 165 >UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0X3_DESAC Length = 175 Score = 78.0 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 24/157 (15%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 S +AV+G + + R TLA GV + G G+ + + G Sbjct: 5 PQQTTSPLVAVIGGGTVTAEQYQLARQVGYTLAQAGVDVVCGGLGGVMEAVSRGCREGGG 64 Query: 162 VSIAVL-GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 I +L GN + +P L P + RN +++ + Sbjct: 65 HVIGLLPGNDADDANPWVSYPL---------------PTGLG------HARNMLVAQSAP 103 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 V+ + G+L AL+ GR V L G P Sbjct: 104 VVIAIAGEY--GTLSELAIALKTGRVVVTLEGWQDIP 138 >UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNM3_METHJ Length = 152 Score = 77.6 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 37/181 (20%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G+ Q+AV+G LA +G+ + SG G+ + + A Sbjct: 2 GDGTRNTGKQVAVIGGSHAGEQDLIHAERVGVLLAHKGIVLLSGGRGGVMEASCRGASNA 61 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G+ + ++ + ++++ RN I+ G + Sbjct: 62 GGMVVGIVPGSEGNSY-------LSAIV----------------KTRMDHARNVILVGSA 98 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+ + G+L AL+ G V+ G G I P+E Sbjct: 99 DAVIAIGGEY--GTLSEIAFALKSGIPVY------------GISTWDIPGVIPCENPDEA 144 Query: 280 L 280 + Sbjct: 145 V 145 >UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9L0_9CLOT Length = 112 Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 48/140 (34%), Gaps = 35/140 (25%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 ++AVVGSR G+ + L I SG A+G+D Sbjct: 2 RVAVVGSRQC---GDLDFFKIKQNLPEDCTEIVSGGAQGVDT------------------ 40 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR-RNRIISGLSKGVLVVEA 227 LA E+ G +EF D P RNR+I S VL Sbjct: 41 -------------LAKKCAEEYGYRYTEFLPDYATHGRTAPLVRNRLIVDHSDFVLAFWD 87 Query: 228 ALRSGSLVTARCALEQGREV 247 +G+ T ALEQ + V Sbjct: 88 YKSNGTRSTLAYALEQDKPV 107 >UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B0_THERP Length = 169 Score = 74.9 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 64/190 (33%), Gaps = 29/190 (15%) Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + +AV G + + E LA G+T+ G G+ + A + G + Sbjct: 1 MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQT 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I +L P A ++ P RN ++ + V+ Sbjct: 61 IGIL--------PGTDPSDANEWVDH------------PICTGLGEARNVVVVASGRVVI 100 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL--VTEPEEILE 281 V L G+L AL+ GR V AL + L + GA + V PEE + Sbjct: 101 AVGGGL--GTLSEIALALKLGRPVIALRSWPLDAS-----LLSRAGATISEVATPEEAVN 153 Query: 282 NLQFGLHWLP 291 + L P Sbjct: 154 QVLAVLSVQP 163 >UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICC1_9EURY Length = 155 Score = 74.9 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 23/143 (16%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + V+G + E +A + SG G+ A K A G++I +L Sbjct: 3 PIIGVIGGSTCEEEICKIAYRVGELIAKNKCILASGGLGGVMLHASKGAKDAGGLTIGIL 62 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G E + P Y RN ++ + ++ ++ Sbjct: 63 PYGK---------------KEANPYIDIAIPT------YYGLARNHLLVRSADVLIAIDG 101 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 + G+L AL +G+ V AL Sbjct: 102 FV--GTLSEISFALNEGKTVIAL 122 >UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like protein n=5 Tax=Dehalococcoides RepID=A5FRM6_DEHSB Length = 162 Score = 74.9 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AV+G+ + R + LA R VT+ G G+ A + A G++I +L Sbjct: 11 VAVIGASKANSEEARLAEEVGKELALRQVTLVCGGMGGVMEAACRGASLNGGLTIGILPG 70 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 R A + +VS RN ++ ++ V+ + A Sbjct: 71 N-----SREEANPYVQIP-----IVSSIGF----------ARNIMVVKSAQAVIAIGGAY 110 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ V AL Sbjct: 111 --GTLSEIAYALQIELPVIAL 129 >UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-family protein n=1 Tax=Propionibacterium acnes RepID=Q6A9G1_PROAC Length = 165 Score = 74.9 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 12/156 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSF--- 55 + + L ++ + + + D GL+ Q + Sbjct: 10 DERRARVVLALLAEPDDPVTGGLMRRLGAVETLGLLDTDTTTVPGLSRVDGQVWRDHLTS 69 Query: 56 --PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALHSF---Q 109 + L +E+ + +P L P LFV G L Sbjct: 70 PGRLDGLAQRLRMVEESGIATLIPGDAHWPQALDDLGDRAPFILFVRGAASFLARPWNDL 129 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 + V GSRA S YGE LA R + +G A Sbjct: 130 VTVTGSRAASAYGEHVAAELAGDLANRERVLVAGDA 165 >UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I784_AZOC5 Length = 181 Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 22/139 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + ++G + + E A G+T+ +G G+ A + A G++I ++ + Sbjct: 28 VGIIGPKNANPEQETLAEALGRAFAKLGLTLLTGGRMGVMQAASRGAFSAGGLTIGIIPD 87 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G + + P RN I++ + ++ V Sbjct: 88 G--------------EWDTANPYVTVPLATGLGP------ARNAIVARACEALVAVGGEY 127 Query: 230 RSGSLVTARCALEQGREVF 248 G+L + R V Sbjct: 128 --GTLSEMAFGMHFDRLVL 144 >UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM8_9FIRM Length = 161 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 22/148 (14%) Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + V+G+ +A G + G G+ A K A G++ Sbjct: 1 MVQQKYVGVIGAAECGVDVVALAEEVGNVVAKSGSVLVCGGRSGVMEAAAKGARDAGGIA 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I +L G + PR RN II+ ++ Sbjct: 61 IGILP-GDD---PRSGNSYIN----------------FGIATGMGDARNVIIARTCDVLV 100 Query: 224 VVEAALRSGSLVTARCALEQGREVFALP 251 V + G+L A++ G+ V L Sbjct: 101 AVTGSY--GTLSEIGLAMKMGKPVIGLK 126 >UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B1I515_DESAP Length = 162 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 27/165 (16%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + V+G+ S W +A R + G G+ A + A + G+ + VL Sbjct: 4 VGVIGAGLCSSEVSGWAEAVGAGIARRQGVLICGGMGGVMEAAARGARREGGLVVGVLP- 62 Query: 170 GLNTIH--PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G + P LA L + RN +I+ S ++ ++ Sbjct: 63 GNDRKEGNPYLSLSLATGLGD---------------------ARNAVIARASDVLIAIDG 101 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL 272 G+L AL+ GR V L G S+GP I A Sbjct: 102 GY--GTLSEIGLALKMGRPVIGL-GTWRIESSKGPDGGIIAAADP 143 >UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH93_9FIRM Length = 124 Score = 71.8 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK- 58 E WL I + ++ I + + L + + + Sbjct: 3 YEYWLA--GIKEITDLKKQKLREVYGSGKAIYYIEETKLDKLRFLNEKDVAILKNAKKDT 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 +E E+ IP + YP +L TD P AL+V G+L + Sbjct: 61 KLEEKWRKTEEKRIQFIPYFLKTYPEKLKYITDPPYALYVLGQLPDEKRKKCG 113 >UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellular organisms RepID=C7P1D2_HALMD Length = 157 Score = 71.8 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 42/186 (22%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ---------V 159 +++V+G S R E LA RG + G G+ + A Sbjct: 2 RVSVIGGSTVSSDEYELARRVGECLAQRGHAVVCGGLGGVMEAVCRGARDGRESTASPGA 61 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G +I +L P A ++ P RN ++ Sbjct: 62 GGHTIGIL--------PGERRAAANEYVD------------TPIATGLGHARNAVVVMNG 101 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEE 278 V+ ++ G+L R + L G H + G V PE Sbjct: 102 DAVIAIDGG--GGTLSELGYGHVFDRPIAGL----------GTHQIESLDGIEHVATPEA 149 Query: 279 ILENLQ 284 ++ ++ Sbjct: 150 AVDYVE 155 >UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT06_CYAP4 Length = 157 Score = 71.4 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AVVG+ + LA G+T+ G G+ A + A G +I +L Sbjct: 4 IAVVGAGQCDPETTVLAETVGQELAQAGITLICGGLGGVMAAACRGAKAAGGQTIGIL-- 61 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 P ++A + ++ + RN I+ ++ ++ V Sbjct: 62 ------PGSDPQMANAWVD------------IAIATGMGEARNLILVHTAQALIAVGGEY 103 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ G+ V L Sbjct: 104 --GTLSEIAFALKLGKPVIGL 122 >UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED55 Length = 103 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 28/102 (27%), Gaps = 10/102 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + E+WL L + I + + + + Q Sbjct: 9 KELEVWLSLART--IGPIKFFSILRTHGSLDEVLKYLNRVANDKVYGIQ--------DAR 58 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + E+ +IPA YP L P + G++ Sbjct: 59 EEINNAERIGAKIIPACDPDYPDLLRNIPSCPPVITALGDIS 100 >UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Streptomyces RepID=Q53755_STRAU Length = 141 Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 2/130 (1%) Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A GR +PGP + S G H L++ A LVT+ E++E + P+ Sbjct: 1 ARRAQRPGRLTMGVPGPATSGLSAGVHELLRGEAQLVTDAAEVVELVGDIGELAPERRGP 60 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + L ++ + A EV+ +L EL G++ Sbjct: 61 VLARDLLPPDTVRVLDALPA--GRAARLEEITLAAATGTDEVIGRLYELHSLGFVERQGD 118 Query: 357 GYVRLRRACH 366 G+ R Sbjct: 119 GWRLTPRTPR 128 >UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=prokaryotic environmental samples RepID=B3T5D8_9ZZZZ Length = 190 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 46/159 (28%), Gaps = 28/159 (17%) Query: 97 FVEGELHALHSFQLAVVGSRAHS--WYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 FV+G H +AV GS S ++ T+ G + G G+ K Sbjct: 10 FVDGVGSMSHRPTVAVFGSNDLSDSPDVQQLCEDLGRTIVDLGCRVACGGLGGVMSAVCK 69 Query: 155 AALQV----NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 A G +I +L G + P + Sbjct: 70 GARSSARYTEGDTIGILPMG--------------DFESANEFIDVIIPTGLG------LF 109 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 RN +++ + V+ G+L A + + V Sbjct: 110 RNMLVARAGDACIGVKGGA--GTLSEIAFAWQIKKPVAV 146 >UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding protein n=4 Tax=Bacteria RepID=A5D3K0_PELTS Length = 167 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 26/146 (17%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 G + + +A G + +G GI + K A G++I +L Sbjct: 3 GGESAPPEDCAAAYRLGQLIAEEGWVLLNGGRPAGIMEASAKGAKDRGGLTIGILPGN-- 60 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 RHA + P + RN I S V+ + + G Sbjct: 61 ---SARHASKYIDI---------------PVVTGMGDARNVINVLTSDAVVALPG--KGG 100 Query: 233 SLVTARCALEQGREVFAL---PGPIG 255 ++ AL+ G++V L PG I Sbjct: 101 TISEVALALKNGKKVVLLNFDPGKIF 126 >UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQW5_METLZ Length = 199 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 51/159 (32%), Gaps = 31/159 (19%) Query: 104 ALHSFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 ++V+G + E++ L + G + SG G+ + A Sbjct: 1 MSRRPVISVIGDAAIEPGCAKEQFAFSLGNALVSNGYRVLSGGLGGVMEAVSRGAHASPA 60 Query: 160 --NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G IAVL G + A ++ G RN I++ Sbjct: 61 YREGDVIAVLP-GND----PAQANPYTDIVIATGL---------------DHARNFIVAN 100 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFA--LPGPI 254 + V+ V SG+L A R + A +PG + Sbjct: 101 -TDAVVAVGGG--SGTLSELSYAWVMHRLIMAYRVPGVV 136 >UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobacillus sp. WCH70 RepID=C5D816_GEOSW Length = 184 Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 108 FQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++AV+G S +A R + +G G+ A K A + G+ I + Sbjct: 2 KRIAVIGQSGEIPDEVRHVAEEVGAEIAKRNAVLLTGGGSGVMEAASKGAKEAGGLVIGI 61 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L + I A + G +F R+ I+ S ++++ Sbjct: 62 LAG--DRI---DVANDYIDIPITTGL--------------HFDFRSLILVHSSDALIMIR 102 Query: 227 AALRSGSLVTARCALEQGREVFAL 250 +G+L A + V + Sbjct: 103 GG--NGTLGELSAAYMNKKPVIII 124 >UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobacter RepID=B5EDM7_GEOBB Length = 169 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 7/140 (5%) Query: 95 ALFVEGELHALHSFQLAVVGSRAHSWYGERW-GRLFCETLATRGVTITSGLARGIDGVAH 153 A++ G L ++A + SR G R + + G + SG ++ Sbjct: 20 AMYSIGNEEILMQQKVAFLCSRKV-PQGVAVKARRWADEQRELGRCVISGYHSPLEKAVL 78 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD-VPPLAYNFPRRN 212 L I + GL I P A + ++S + P +RN Sbjct: 79 CRLLLGTQPIIVAMAQGLGRIDP----EWGAHISAGRLLVISRYAESVTHPCESKCYQRN 134 Query: 213 RIISGLSKGVLVVEAALRSG 232 +++ L+ V++ A+ Sbjct: 135 KMMMDLADQVVIAHASPGGK 154 >UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rickettsia akari str. Hartford RepID=A8GN14_RICAH Length = 107 Score = 64.9 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQ-SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 LRL+ ++ + + ID L Q+++ F + + Sbjct: 21 LRLIRSDNIGPKTFCSLIQLFGDAGTAIDNAP--DFSLQGGQSKQIKIFNKSDAAKEMDL 78 Query: 67 LEQPNHHLIPADSEFYPPQLLATT 90 L++ + +I ++ Y LL Sbjct: 79 LKKNDTKIITYNAPEYSKSLLEIY 102 >UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular organisms RepID=B1WX38_CYAA5 Length = 166 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 23/143 (16%) Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 + + + + +A + + +G G+ A+K A + G++I +L + Sbjct: 15 SATEIDIKNAYELGKLIAQQDWILLTGGRNVGVMDAANKGAKEAGGLTIGILPSNHTK-- 72 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 + A + A+++ RN I S ++V + G++ Sbjct: 73 ---NVSDAVDI-----AILT----------DLGNARNNINVLSSD--IIVACGIGLGTVS 112 Query: 236 TARCALEQGREVFALPGPIGNPG 258 AL+ + V L + Sbjct: 113 EIALALKNRKPVILLSESPESQQ 135 >UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=D0T8Z4_9BACE Length = 159 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L + A + S S + + G + SG + ++ L+ Sbjct: 7 GNKELLKLKKTAFLASSTISSETVLKCYDWATEMRRHGECVISGFSSKLEQDVLHFLLKG 66 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 + I VL + + P L A + + ++S RNR I +S Sbjct: 67 TQLIIIVLARKMYKVIPAE---LQAPMEQNRLLIIS-VSNATRQSRTTALARNRYICEIS 122 Query: 220 KGVLVVEAALRS 231 + +L V S Sbjct: 123 ERILFVGVTESS 134 >UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C515_SPHTD Length = 175 Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AV G + RW E +A G + G G+ A + A + G +I +L Sbjct: 2 IAVCGPNEATDEEIRWAEEVGERIALAGHALVCGGRDGVMAAACRGARRAGGATIGIL-- 59 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 P R A +E RN ++ + V+ + Sbjct: 60 ------PGTDRREANEWVEHVIC------------TGLGNARNAVVVASGEAVIAIGGGF 101 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ G+ V L Sbjct: 102 --GTLSEIALALKMGKHVIGL 120 >UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C1DTZ1_SULAA Length = 223 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 9/78 (11%) Query: 107 SFQLAVVGSRAH---SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + GS Y R LA +G TI +G GI A++ A + G S Sbjct: 35 QPSVTIFGSARVKEGDKY-YDSARQLGFKLAKKGFTIVTGGGPGIMEAANRGAFEAGGNS 93 Query: 164 IAVLGNGLNTIHPRRHAR 181 I GLN P+ Sbjct: 94 I-----GLNIKLPKEQKP 106 >UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V9S6_SULSY Length = 225 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 41/201 (20%) Query: 107 SFQLAVVGSRAHSW--YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + GS R L+ +G +I +G GI A++ A + +G SI Sbjct: 35 LPSVTIFGSARVEEGNKYYEAARELAFKLSKKGFSIVTGGGPGIMEAANRGAFEADGNSI 94 Query: 165 AVLGNGLNTIHPRRHA--RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 GLN P+ + +L F R ++ + Sbjct: 95 -----GLNIKLPKEQKPNKYLTEILNFN----------------YFFARKVMLVKYATAF 133 Query: 223 LVVEAALRSGSL--VTARCALEQGREVFALPGPIGNPGS-----EGPHWLI-------KQ 268 ++ G+L +T L Q +++ P + + + ++ K+ Sbjct: 134 VLFPGGF--GTLDEITETLTLIQTKKLKPFPVILYGNEYWNGFVQWLNDVVVKDGYIDKE 191 Query: 269 GAILVTEPEEILENLQFGLHW 289 L + ++I E + + W Sbjct: 192 DTELFKQMDDIDEIVDYIDQW 212 >UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax=Bacteria RepID=C2FUF1_9SPHI Length = 233 Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 21/138 (15%) Query: 108 FQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS R + + + L RG + SG GI A+K A + G S+ Sbjct: 45 PCVSIFGSARTPREHKYYQMAVDIGKLLTERGYGVISGGGPGIMEAANKGAYEAGGKSV- 103 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + +++ L EF F R + S+G +V+ Sbjct: 104 ----GLNIELPFE--QFHNKYIDRDKLL--EF--------NYFFVRKVMFMKYSQGYIVM 147 Query: 226 EAALRSGSLVTARCALEQ 243 G++ A+ Sbjct: 148 PGGF--GTMDELFEAITL 163 >UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBC8_9RHOB Length = 100 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 265 LIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 LI+ GA LV ++LE ++ + A E+L +G Sbjct: 2 LIRDGATLVRSGADVLETIRP-APTPQLELPPQSEPRRLSETAALHSEILNRLGPSPLAE 60 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + V L++LEL G I GG + L Sbjct: 61 NQLIRDLKSAAAIVTPALIDLELEGKITRQSGGLIAL 97 >UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XIX5_9BACT Length = 227 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 28/166 (16%) Query: 108 FQLAVVGS-RAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + GS R + Y + LA + + +G GI A++ A + +G SI Sbjct: 36 PGVTIFGSARTPARNPY-YQATVTLARGLAKHNLAVITGGGPGIMAAANRGASRAHGKSI 94 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P LEQ G L + ++P + F R S G + Sbjct: 95 -----GLNIELP----------LEQKGNLYT----NIPINFHYFFARKVCFVKYSLGFVF 135 Query: 225 VEAALRSGSLVTARCALE--QGREVFALPGPIGNPGS-EGPHWLIK 267 + G+L L Q R + P + G ++ Sbjct: 136 MPGGF--GTLDEFFEVLTLVQTRRIPRFPLILFGKTYWTGLIKWMR 179 >UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3P8_9DELT Length = 158 Score = 57.6 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 27/151 (17%) Query: 105 LHSFQLAVVGSRAHSWYG-----ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + ++V+GS LA G + G G+ A K A + Sbjct: 1 MAKSHVSVIGSGQCGPNSEGRALYAAAVELGGLLARNGYVVVCGGLGGVMEGACKGAREA 60 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G +I +L P A + +E +P P RN ++ Sbjct: 61 GGRTIGIL--------PSSDRTTANAWVE------------IPIATGLGPMRNMLVVTNG 100 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFAL 250 ++ V G+L A + G+ V A+ Sbjct: 101 DVIVAVGGGF--GTLSEVALARKTGKPVVAI 129 >UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacteria RepID=D0MG69_RHOM4 Length = 247 Score = 57.6 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 23/139 (16%) Query: 108 FQLAVVGSRAHSWYG---ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS + G R L G + +G GI A+K A + GVS+ Sbjct: 59 PCVSIFGSAR-TPRGHRYYRMAEAVGRCLVEHGFGVITGGGPGIMEAANKGAKEAGGVSV 117 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN + P +++ + F R + ++G +V Sbjct: 118 -----GLNIVIPHEQES--NPYIDRDKLI----------NFDFFFVRKVMFVKYAQGFIV 160 Query: 225 VEAALRSGSLVTARCALEQ 243 + G++ AL Sbjct: 161 LPGGF--GTMDELFEALTL 177 >UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6EE78_9SPHI Length = 244 Score = 57.6 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 84 PQLLATTDYPGAL--FVEGELH-ALHSFQLAVVGS---RAHSWYGERWGRLFCETLATRG 137 + G + FV+G + V GS + Y R + LA G Sbjct: 18 ARWKEMKYVFGVVMQFVKGFRTLHFIGPCVTVFGSARFKEDHPY-YELAREISKELAQHG 76 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 I +G GI A++ A + G+SI G N + P Sbjct: 77 FAIMTGGGPGIMEAANRGAKEGGGLSI-----GCNIVLPFEQHE 115 >UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax=Thaumarchaeota RepID=A9A3J4_NITMS Length = 169 Score = 57.2 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Query: 104 ALHSFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + Q+ V+G + + E+ +A + +G GI A + A +G Sbjct: 1 MVKKRQILVIGNNTNGCTPEHEKIAYDIGVEIAKSDSVLITGGLGGIMTAASRGAKDTDG 60 Query: 162 VSIAVLG 168 +++ ++ Sbjct: 61 LTVGIIP 67 >UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q0A4N6_ALHEH Length = 241 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 61/220 (27%), Gaps = 32/220 (14%) Query: 107 SFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 ++V GS R + + L+ G ++ SG GI A+K A SI Sbjct: 45 KPSVSVFGSARTAPDHPYYKLAEDLSRALSDAGFSVVSGGGPGIMEAANKGAHGGKSPSI 104 Query: 165 AVLGNGLNTIHPRR-HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 GLN P + +F R + + + Sbjct: 105 -----GLNIQLPHEQSGNPYQDISLN---------------FRHFFSRKVMFVKYASAYV 144 Query: 224 VVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQG--AILVTEPEE 278 V+ G+L L G+ + P +G + A E+ Sbjct: 145 VLPGGF--GTLDELAEILTLVQTGKTRRIPIILVYKPYWQGLVDWFRDTLVAEGAINAED 202 Query: 279 ILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 + +L L + + F + + E + Sbjct: 203 M--DLFQVLDEPTEVVDAIFAHYEDRGFEPSRREREMLLD 240 >UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ2_9CLOT Length = 173 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 18/134 (13%) Query: 128 LFCETLATRGVT-ITSGLARGIDGVAHKAAL----QVNGVSIAVLGNGLNTIHPRRH--A 180 + GVT +G+A G+D A + L NG++ L P Sbjct: 37 EIIRQIEENGVTHFITGMAIGVDMFAAEIVLGLKSAYNGIT-------LECAIPCETQAE 89 Query: 181 RLAASLLEQGGALVS----EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + +L ++ + S E L +RNR + + ++ V SG+ T Sbjct: 90 KWSEALRDRYFDIASKCDKETLLQQRYTPDCMHKRNRYMVDQADYIIAVWNGKPSGTGKT 149 Query: 237 ARCALEQGREVFAL 250 + A +QG+ V + Sbjct: 150 VQYAQQQGKPVRVI 163 >UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX44_DEIRA Length = 256 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 44/145 (30%), Gaps = 23/145 (15%) Query: 101 ELHALHSFQLAVVGS-RAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + L + V GS R + + L G + +G GI A++ A + Sbjct: 47 RMAHLSVPLVTVYGSARTALTDRYYGLAQTLGRELVGAGFGVVTGGGPGIMQAANQGAYE 106 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 GVS+ GLN + P L EF F R +++ Sbjct: 107 AGGVSV-----GLNIVLPHEQRHNPYQTLSL------EF--------EYFHARKVMLARY 147 Query: 219 SKGVLVVEAALRSGSLVTARCALEQ 243 + + G+L L Sbjct: 148 AHAFVAFPGGF--GTLDEMMEILTL 170 >UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BV32_9PROT Length = 242 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 8/82 (9%) Query: 108 FQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS S + L+ G I +G G+ A K A SI Sbjct: 47 PAISFFGSARSKPSDKFYKLSEEIAFKLSESGFNIITGGGPGLMEAASKGAFNGKSKSI- 105 Query: 166 VLGNGLNTIHPRR-HARLAASL 186 GLN I P+ + + Sbjct: 106 ----GLNIILPKEQNPNPYQDI 123 >UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003826D2 Length = 207 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 40/138 (28%), Gaps = 23/138 (16%) Query: 108 FQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++V GS L G + +G GI A+K A + G+SI Sbjct: 81 PAVSVFGSARTKPDHADYALAEDVGRLLVDEGFAVITGGGPGIMEAANKGASEAGGLSI- 139 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GL P + ++ F R + ++G +V+ Sbjct: 140 ----GLGIELPFEQG--MNRYV------------NLGVNFRYFFARKTMFVKYAQGFVVL 181 Query: 226 EAALRSGSLVTARCALEQ 243 G+ AL Sbjct: 182 PGGF--GTFDELFEALTL 197 >UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorobiaceae RepID=B3EM50_CHLPB Length = 235 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 21/137 (15%) Query: 109 QLAVVGSRAHSWYGERWG--RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++A+ GS S + + LA G + +G G+ A+ N + ++ Sbjct: 30 RVAIFGSARISEEDREYLDVFAIAKALAESGFDVVTGGGPGLMNAANAGHKSANSPTHSI 89 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 GLN P S + LD+ F R LS ++V Sbjct: 90 ---GLNIRLPHEEMP-------------SPY-LDIKQDFNRFSSRLDTFMALSDAIIVAP 132 Query: 227 AALRSGSLVTARCALEQ 243 + G+L+ A + Sbjct: 133 GGI--GTLLELFYAWQL 147 >UniRef50_Q254M4 Putative uncharacterized protein CF0492 n=2 Tax=Chlamydophila RepID=Q254M4_CHLFF Length = 237 Score = 54.5 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 23/147 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + VVG + + + + LA G ++ +G GI A+ VL Sbjct: 59 PWVVVVGGCSPTDENYKKAQHAGLLLAMNGYSVVTGSGPGIMEAANSGT---------VL 109 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G++ + L + E VS + R + G S G + Sbjct: 110 AGGISLGFILKGEDLNEYIPEGNYLQVS-----------HISHRLEGMIGNSSGCIAFPG 158 Query: 228 ALRSGSLVTARCALEQGREVFALPGPI 254 L G+L AL+ R A+P P+ Sbjct: 159 GL--GTLDEVVFALDNFR-YQAVPRPV 182 >UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VJ80_9BACT Length = 154 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 5/142 (3%) Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G L + A + S + + + +RG I SG ++ L Sbjct: 7 YLGNQELLKQQKTAFLASSNIATETVLQVYDWATEMRSRGDCIISGFNSKLEQDVLHFLL 66 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + + I V+ + P L ++ + ++S RN+ I Sbjct: 67 KGSQPIILVIARKMYKTIP---THLQTAIKQNRLLIIS-ISNSTRQSKATALERNKYICH 122 Query: 218 LSKGVLVVEAALRSGSLVTARC 239 L++ +L +S SL T + Sbjct: 123 LAEKILFAGVTEQS-SLYTLQY 143 >UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBD0_LARHH Length = 185 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 22/140 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A+VG R + E LA G+T+ G G+ A + A G+ + +L Sbjct: 28 VAIVGPREATPEQEAVAYRLALALAGAGLTLVCGGKIGVMQAAARGARDAGGICVGLLPE 87 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 L P + RN +++ + ++ V L Sbjct: 88 --------------EEAAHGNPFLTVALPTGIG------LSRNMLVARSAACLVAVGGGL 127 Query: 230 RSGSLVTARCALEQGREVFA 249 G+L AL+ + VFA Sbjct: 128 --GTLSEIAMALQWKKPVFA 145 >UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A3N5_THESM Length = 170 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 27/146 (18%) Query: 109 QLAVVGS--RAHSWYGERWGRLFCETLATRGVTIT--SGLARGIDGVAHKAALQVNGVSI 164 Q+A+ GS + F + LA T+ +G GI +A + + G+ + Sbjct: 3 QIAIAGSSDTEPLPKAVEKTKEFIKELAKYKDTVVLLTGGRGGIMEIASREFARFGGLVV 62 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L R+ ++ + G +F R+ I+ + ++V Sbjct: 63 GILPE-------RQKGNEFNTIRIKTG--------------MDFAERSAIMINSADVLVV 101 Query: 225 VEAALRSGSLVTARCALEQGREVFAL 250 + + G++V A A + + + + Sbjct: 102 LGGGI--GTMVEALMAYDYSKVLVVV 125 >UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms RepID=B9P9D8_POPTR Length = 315 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 38/141 (26%), Gaps = 27/141 (19%) Query: 107 SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 +++ GS R S Y + + G + SG GI A+K A S Sbjct: 119 RPAVSIYGSARLREDSPY-YQKTIEIARLFSDAGFAVISGGGPGIMEAANKGAHAGKSAS 177 Query: 164 IAVLGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 + GLN P + +F R S Sbjct: 178 V-----GLNIELPHEQQGNPYQDIA---------------MRFRHFFTRKVTFVKNSDAF 217 Query: 223 LVVEAALRSGSLVTARCALEQ 243 +V+ G+L L Sbjct: 218 IVMPGGF--GTLDELAEVLTL 236 >UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 Tax=Mycobacterium tuberculosis complex RepID=A1KLI6_MYCBP Length = 207 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 25/151 (16%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+ V GS +A +G + SG G + + A +G+ + VL Sbjct: 28 QIGVFGSGTIGPRVYELAYQVGAEIAKQGHILISGGMTGTMEASSRGASDADGLVVGVLP 87 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS-KGVLVVEA 227 + + + RN I+GLS G +VV Sbjct: 88 G--------------DKFTDGNAYSTIKILSGMQF------ARN-YITGLSCHGAIVVGG 126 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPG 258 + SG+ AR E GR + G+P Sbjct: 127 S--SGAYEEARRVWE-GRGPVVVLANSGSPT 154 >UniRef50_Q1MRH8 Predicted Rossmann fold nucleotide-binding protein n=5 Tax=Desulfovibrionaceae RepID=Q1MRH8_LAWIP Length = 233 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 28/218 (12%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + + L + G I +G G+ A+KAA + G SI Sbjct: 37 PCVSIFGSARAKPDNPLYKETEAISKLLVSAGFGIITGGGPGLMEAANKAAFEAGGRSI- 95 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GL+ P + +E+ F R + ++ +V+ Sbjct: 96 ----GLHIHLPHEEG------CNNYLTIRTEY--------RYFFIRKLMFVKYAQAYVVM 137 Query: 226 EAALRSGSLVTARCA--LEQGREVFALPGPIGNPG-SEGPHWLIKQ--GAILVTEPEEIL 280 + G++ A L Q + + P + N G ++Q EP EI Sbjct: 138 PGGM--GTIDEFSEAFVLTQTKRIHPFPIILYNSQFWNGLVDWMRQTMSKEGFIEPSEID 195 Query: 281 ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 L P + L + Sbjct: 196 ALLNICDTPEEVLKIIQEKVPTAITHKKNKHKQLHSYP 233 >UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SC37_NOCSJ Length = 94 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL--QFGLHWL 290 + TA R V ALPGP+ + S G H LI+ G A +VT EIL +L + Sbjct: 1 MNTAHWTTNLHRPVLALPGPVTSVASAGVHQLIRLGEASMVTNAPEILNDLIGRPAATAA 60 Query: 291 PDAPENSFYSPDQQDVAL 308 A + Y+P Sbjct: 61 RSAQVDESYAPSPARHTP 78 >UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KW25_9GAMM Length = 236 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V GS S R + LA G+ + +G G+ A++ A + GVS+ Sbjct: 54 PAVTVFGSARSSPDSWEARAAGVLGGHLARAGIPVITGGGPGVMEAANRGAHEQGGVSV- 112 Query: 166 VLGNGLNTIHPRR 178 GLN P Sbjct: 113 ----GLNIELPTE 121 >UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylobacter RepID=B9D5I3_WOLRE Length = 209 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 10/77 (12%) Query: 106 HSFQLAVVGSRA---HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-G 161 + + GS S Y + + LA G + SG G+ A+K A + Sbjct: 29 KNPSVTFFGSARFDESSKY-CKMAFSLAKELADGGFAVVSGGGPGVMEAANKGAYESGKS 87 Query: 162 VSIAVLGNGLNTIHPRR 178 SI GLN + P Sbjct: 88 PSI-----GLNIVLPFE 99 >UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1IJ66_ACIBL Length = 275 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 12/101 (11%) Query: 84 PQLLATTDYPGALFVEG-ELHALHSFQLAVVGSRAHSW--YGERWGRLFCETLATRGVTI 140 +L +D FV+G + + V GS G LA G + Sbjct: 66 ERLKRISDE----FVQGFDKLYGVGPAVTVFGSARFHEGHKYYDLGCEVGRELAKAGFAV 121 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 +G G+ A++ A + G S+ GLN I P A Sbjct: 122 LTGGGPGMMEAANRGAKEAGGASL-----GLNIILPFEQAP 157 >UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protein n=18 Tax=Francisella RepID=Q0BL10_FRATO Length = 237 Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 7/76 (9%) Query: 108 FQLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS S + ++L+ G + +G GI +K A Q + SI Sbjct: 46 PAISIFGSARISKDDRYYKDTVELAKSLSDHGFAVITGGGPGIMEAGNKGAQQGSCSSI- 104 Query: 166 VLGNGLNTIHPRRHAR 181 GLN P Sbjct: 105 ----GLNITLPHEQRP 116 >UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G407_9DELT Length = 179 Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 29/178 (16%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGV----AHKAALQVNGVSIAVLGNGLNTIHPRR 178 E RG I G G+ A ++A G + +L L+ P Sbjct: 12 MALAAELGEACVDRGWRIVCGGLGGVMRAVGEGARRSARASGGDVVGLLPT-LD---PST 67 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + P + RN ++ V+ + G+L Sbjct: 68 ----------ANPFVDVAIPTGLQ------HGRNTLVVSSGDVVVALGGGA--GTLSELA 109 Query: 239 CALEQGREVFAL---PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 A + + + AL PG + +E ++ + L P+A Sbjct: 110 LAWQMDKPIVALTGEPGWAATLAGQALDHRRSDRIHEAATVDEAVDRVAELLKKSPNA 167 >UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5E9I6_BRASB Length = 150 Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 47/146 (32%), Gaps = 43/146 (29%) Query: 107 SFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 S + +VGSR S F +L + SG A+G+D A +AA + ++ Sbjct: 5 SKVVGIVGSRHFPS---RALVESFVTSL-PCDTCVVSGGAQGVDTWAIEAARSLGLPTLI 60 Query: 166 VLG----NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 + +G P R+A L + E I+ G Sbjct: 61 IQADWKRHGR-KAGPLRNAELVRRVDE--------------------------IAAFWDG 93 Query: 222 VLVVEAALRSGSLVTARCALEQGREV 247 G+L T AL G V Sbjct: 94 -------RSRGTLNTVMLALRAGLPV 112 >UniRef50_Q6MD50 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q6MD50_PARUW Length = 230 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 24/160 (15%) Query: 97 FVEGELHALHS-FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FV+G + +++ GS ++ +G I +G GI A+ Sbjct: 30 FVDGFETMTNLGPSVSIFGSARLPPESIYYNLAVDVARHISRKGFAIITGGGPGIMEAAN 89 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 K A + G S GL P ++ F R Sbjct: 90 KGAQESKGHS-----CGLAIDLPFESEP--NRFID----------FKYRLNFRYFFIRKV 132 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALP 251 + ++G + + + G+L AL Q +++ A P Sbjct: 133 MFIRYAQGYVFLPGGV--GTLDELFEALTLIQTKKIKAFP 170 >UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonproteobacteria RepID=A6Q9K3_SULNB Length = 315 Score = 51.0 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 57/175 (32%), Gaps = 38/175 (21%) Query: 119 SWYGERWGRLFCETLATRG-------VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 + Y R F + G VT+ +G GI A++ A V +I GL Sbjct: 137 THY-YDTAREFGRLVGNSGKGPDDARVTLMTGGGPGIMEAANRGAFDVGAKTI-----GL 190 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPL---DVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 N P + E +F RR +K ++V Sbjct: 191 NITLPYEQYP--------NPYITPELCFRLHYFAVRKMHFLRR-------AKALVVFPGG 235 Query: 229 LRSGSLVTARCALE--QGREVFALPGPIGNPGSEGPHWLIKQGA--ILVTEPEEI 279 G++ L Q R+V +P I S + + +G V +PE++ Sbjct: 236 F--GTMDECFEVLTLVQTRKVDPIP-IIFVGESYWKNMVYFEGFVEEGVIDPEDM 287 >UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chlorobiaceae RepID=B4SEQ5_PELPB Length = 245 Score = 51.0 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 22/150 (14%) Query: 97 FVEG-ELHALHSFQLAVVGSRAHSWYGER--WGRLFCETLATRGVTITSGLARGIDGVAH 153 FV G E+ + + +AV GS LA G ++ +G G+ A+ Sbjct: 45 FVSGFEMMSDAAPAVAVFGSTRVPAESAEYLLAERLGSLLAAEGFSVITGGGPGVMAAAN 104 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 K A GVSI G N P + ++ + F R Sbjct: 105 KGAQGAGGVSI-----GFNIKLPNQQQP--NKYIDHDKLV----------SFQYFFVRKV 147 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + ++ + + G+L A+ Sbjct: 148 MFMKYAQAFIALPGGF--GTLDEVMEAITL 175 >UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria RepID=Q2LWS8_SYNAS Length = 219 Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 107 SFQLAVVGSRAHSW----YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 +++ GS YG+ + LA +G ++ +G GI A+K A + G Sbjct: 39 RNAVSIFGSARLKPGDLWYGK--AEYLAKRLAEKGFSVITGGGPGIMEAANKGAAEAGGK 96 Query: 163 SIAVLGNGLNTIHPRRHAR 181 S+ G+N P Sbjct: 97 SV-----GMNIRLPFEQKP 110 >UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6Y2_9BACT Length = 237 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 33/192 (17%) Query: 102 LHALHSFQLAVVGS-RAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + + +AV GS R + R L G + +G GI G A++ A + Sbjct: 41 MSRMPDNLVAVFGSARTPEDSPDYQAARQTGAMLVKAGYGVITGGGPGIMGAANRGAKEA 100 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL- 218 G +I GLN P +E+ D Y F R+ + L Sbjct: 101 GGRAI-----GLNIELPMEQHP-------------NEYQTDSLSFRYFFIRK---VCFLK 139 Query: 219 -SKGVLVVEAALRSGSLVTARCALE--QGREVFALPGP-IGNPGSEGPHWLIKQ---GAI 271 + GV+V G+L L Q R++ +P +G G IK+ A Sbjct: 140 YASGVIVFPGGF--GTLDELAEVLTMIQTRKINPIPVILVGKKFWNGFLHWIKETLVSAG 197 Query: 272 LVTEPEEILENL 283 +++E ++ L +L Sbjct: 198 MISEFDQGLYHL 209 >UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RRF1_9MOLU Length = 82 Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 26/73 (35%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + +I+ + + I + YP L P Sbjct: 9 LYYFALKYNGDFDKIYSSLRTREKFNIDEFIRLKIDIQYQHITILDDKYPNYLKGVESPP 68 Query: 94 GALFVEGELHALH 106 ALF EG L+ + Sbjct: 69 FALFYEGNLNLIK 81 >UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellular organisms RepID=C6MAL3_NEISI Length = 252 Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 107 SFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS R + + L+ G ++ SG GI A+K A ++ Sbjct: 56 QPAVSIYGSARTPENHPDYEFTLRLARKLSDAGFSVISGGGPGIMEAANKGAFAGASPAV 115 Query: 165 AVLGNGLNTIHPRRHAR 181 GLN + P Sbjct: 116 -----GLNIVLPHEQKA 127 >UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=22 Tax=Cyanobacteria RepID=A5GUK3_SYNR3 Length = 170 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN- 160 L ++A++G+R L +L G ++ + A+GI+ A + AL V+ Sbjct: 23 LQNTGQRRIAILGTRHVPVVSIHLVELLARSLVQEGHSMLTSGAQGINAAAIRGALAVDP 82 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 +L L P L +L LVS+ D PL N+ I Sbjct: 83 AKLTVILPQSLEQQAP-ESQELLEQVLH----LVSKPENDDLPLTEASTLCNQEIVSRCD 137 Query: 221 GVLVVEAALRSGSLVTA-RCALEQGREV 247 ++ A S +L+ A + A + G+ V Sbjct: 138 QLICF-AFHDSETLIQACQDAEDLGKVV 164 >UniRef50_Q47ZZ4 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZZ4_COLP3 Length = 182 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 25/152 (16%) Query: 105 LHSFQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA--ALQVNG 161 + Q+AV+G +R + + G + G G+ + + + Sbjct: 1 MSFPQVAVIGNARIKLSILQHMAESVGLIINELGFHLVCGGLGGVMEASCIGHKSGDMPC 60 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +I +L + A ++ G V RN+++ Sbjct: 61 QTIGILPS-----IKADTANEFIDIVIPSGLDV---------------GRNQLVVASGFA 100 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGP 253 V+V+ G+L A + + + + G Sbjct: 101 VVVLGGGA--GTLSEVALASQFNKPILLMKGS 130 >UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacteria RepID=A8FW12_SHESH Length = 249 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 7/72 (9%) Query: 109 QLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +++ GS + LA G +G GI +K A + S+ Sbjct: 55 AISIFGSARVTPDNIYYEKAEQLARRLAQEGFATITGGGPGIMEAGNKGANENQAKSV-- 112 Query: 167 LGNGLNTIHPRR 178 GLN P Sbjct: 113 ---GLNIDLPME 121 >UniRef50_B2UL52 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL52_AKKM8 Length = 352 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 40/143 (27%), Gaps = 22/143 (15%) Query: 103 HALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 H +++V GS R F + G + +G GI A++ A + Sbjct: 69 PYRHIRKISVFGSARIRNDEPAYETAREFAREASEHGYMVITGGGPGIMQAANEGAGEQR 128 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 GLN P ++ L++ + NF S Sbjct: 129 SF-------GLNITLPYEQTS--NHVVAHSDKLINFYYF--FVRKLNF-------VAESD 170 Query: 221 GVLVVEAALRSGSLVTARCALEQ 243 ++ G++ L Sbjct: 171 AMVAFPGGF--GTMDEVFETLTL 191 >UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYN6_ACIFD Length = 340 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 49/198 (24%), Gaps = 37/198 (18%) Query: 39 LQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFV 98 G Q L + E+ L L + ++ L Sbjct: 11 PAVAGRDSDLKQLLLDEALAATEAPLDRL---DLKMLT-------SALRELRSAFETFG- 59 Query: 99 EGELHALHSFQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 ++ V GS + LA G + +G GI A + A Sbjct: 60 ----PFRTQRKVTVFGSARTHPDEPSYQLAETLGARLAQAGWMVITGGGPGIMEAAARGA 115 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 + G+N P L E G L F R ++ Sbjct: 116 GPHH-------AFGINIRLPLEQPG-DHELAEHGRLL----------EMKYFFTRKVLMV 157 Query: 217 GLSKGVLVVEAALRSGSL 234 S + + L G+L Sbjct: 158 RESDAFISLPGGL--GTL 173 >UniRef50_A0KCC4 Rossmann fold nucleotide-binding protein-like protein n=10 Tax=Burkholderia RepID=A0KCC4_BURCH Length = 201 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 61/204 (29%), Gaps = 37/204 (18%) Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--- 160 ++ + V+GS + LA G + +G +G+ +A V Sbjct: 18 QRNNRTIGVMGSGK--EPWLAFSEPLGAWLAQAGFNLLTGGGQGVMLAVARAFAGVPGRA 75 Query: 161 GVSIAVLGNGLNTI--------HPRRHARLAASLLEQGGALVSEFP---LDVPPLAYNFP 209 G SI +L + + +P + +++ P P N Sbjct: 76 GRSIGILPTQADPVAGFVPLDGYPHP----FVDIP-----VLTPLPRREPGAAPDTIN-- 124 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN + S ++ + G+ A + + GP +G + Sbjct: 125 -RNYVNVLSSDLIVALPGGP--GTAEEIALAQRWRKPLVCF-GP------DGAFRSLVAD 174 Query: 270 AILVTEPEEILENLQFGLHWLPDA 293 A+ + ++++ + Sbjct: 175 AVCTSSVDDVIRFIDDAFTAEQAQ 198 >UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protein n=3 Tax=Sphingobacteriales RepID=C5PUJ3_9SPHI Length = 251 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 13/97 (13%) Query: 97 FVEGELH-ALHSFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 F++G + V GS + Y R ++ G TI +G GI A Sbjct: 36 FIKGFRALHFIGPCITVFGSARFKEDHPY-YALARKVSAEVSRLGFTIMTGGGPGIMEAA 94 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRR---HARLAASL 186 ++ A G S+ G N + P + L + Sbjct: 95 NRGARDAGGPSV-----GCNIVLPHEQHPNPYLDKYI 126 >UniRef50_UPI0001B520AA hypothetical protein ShygA5_29070 n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B520AA Length = 148 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 60/158 (37%), Gaps = 27/158 (17%) Query: 110 LAVVGSRAHSWYGER-WGRLFCETLA-----TRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + G+R+ +G + + LF LA I G A+GID ++ L + G + Sbjct: 1 MTITGTRSTGHHGLKSYAELFAHYLAPFAGEETRFYI--GGAKGIDSLSL---LWLAGNT 55 Query: 164 IA----VLGNGLNTIHPRRHARL---AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 A V+ ++ P + + + +E L P + RNR + Sbjct: 56 HAQITIVVPGTIHQQPPEAQQAITRSRDRITDVVELHAAE--LGSPA----YHARNRWMV 109 Query: 217 GLSKGVL---VVEAALRSGSLVTARCALEQGREVFALP 251 S V+ ++ +G+ T EQG+ +P Sbjct: 110 DHSDMVIGFPLIGPQGTAGTWQTLNYGAEQGKPHLIVP 147 >UniRef50_D2QZI7 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZI7_9PLAN Length = 381 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 66/246 (26%), Gaps = 52/246 (21%) Query: 30 KQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP------------NHHLIPA 77 + + + R +E + ++Q + ++ Sbjct: 29 TSDDLFRTTSSELVDPEPTREPLSRRRRWQVEDLVDQIKQTADKLAADGRELGDLKILSR 88 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS--RAHSWYGERWGRLFCETLAT 135 L + V GS + F + +A Sbjct: 89 T-------LRELRYALKVFG-----PYRSRRKATVFGSARTKPDEPAYQQAVAFGKAIAA 136 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 + +G A GI H A + N + GL + P + A +++ LV Sbjct: 137 SDWMVVTGAAFGIMEAGHVGAGRENSM-------GLGIMLPFEQS--ANPIIDGDEKLV- 186 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ----GREVFALP 251 + F R ++ V+ + G+L A + R++ +P Sbjct: 187 --------MMKYFFTRKLMLVKECDAVVCLPGGF--GTLDEAMEVITLLQTGKRDI--VP 234 Query: 252 GPIGNP 257 + +P Sbjct: 235 VVLLDP 240 >UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP8_9BACE Length = 78 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%) Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++ ++ +D++ E +V LL LEL I V Y + Sbjct: 20 EEKVYGSICLIPKSIDIIIEETHLTPLKVCEILLNLELKDMIEQVSHNYYVRK 72 >UniRef50_D0LPT5 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPT5_HALO1 Length = 178 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 26/150 (17%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ----VN 160 + V+GS S L G+ + +G G+ A + A + Sbjct: 1 MRRPVATVIGSTRASAEQSALAHALGLALVDAGLRVLTGGLGGVMEAALRGARASARYQS 60 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +IAVL + A AA ++ G RN I ++ Sbjct: 61 GDTIAVLPT-----YRAADANDAADIVICTG---------------MNHARNTI--AVAS 98 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFAL 250 +V+ RSG+L A E GR V + Sbjct: 99 AAVVLAVGGRSGTLGELALAWELGRPVICV 128 >UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNF2_9GAMM Length = 223 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R R + +A GV++ +G G+ ++ A +G SI Sbjct: 41 PAVSIFGSARVNEDSWEYRSARALGQLMADAGVSVITGGGPGVMEAGNRGARSGDGRSI- 99 Query: 166 VLGNGLNTIHPRR 178 GLN PR Sbjct: 100 ----GLNITLPRE 108 >UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUC5_9BACE Length = 155 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 16/135 (11%) Query: 124 RWGRLFCETLATRGVT-ITSGLARGIDGVAHKAALQVNGVSIA-----VLGN---GLNTI 174 E LA GVT SG+A G+D A A L + G + A +L Sbjct: 6 ALTEQI-EQLARNGVTQFLSGMAEGVDTWAALAVLALRGKNDALKLHCILPCREQAEQWS 64 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV-EAALRSGS 233 P + + S+LEQ S ++ RNR + S +L V R G+ Sbjct: 65 APAQ--EMYRSILEQA---DSVVYVNRDYRKDCMLERNRFLVEHSDILLAVYNGERRGGT 119 Query: 234 LVTARCALEQGREVF 248 T R A + GRE++ Sbjct: 120 AATIRYARKAGREIW 134 >UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CTX3_9BACE Length = 79 Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 26/73 (35%), Gaps = 2/73 (2%) Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEV--TPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ +++ ++ ++ + + + + + L LE+ G Sbjct: 7 PVSPQVVQRQLFPELTPEEEQVITHLQKHPDGIQINTLVVESNIAINRMTSLLFNLEMKG 66 Query: 350 WIAAVPGGYVRLR 362 + A+ GG +L Sbjct: 67 VVRALAGGVYKLA 79 >UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8L6_SPHTD Length = 280 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS R L+ G I +G GI A++ A G+S+ Sbjct: 79 QGVSFFGSSRIDESDPMYAAARALAFDLSRAGFAIITGGGPGIMEAANRGAHDAGGLSVG 138 >UniRef50_A6C3L6 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3L6_9PLAN Length = 356 Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 29/110 (26%), Gaps = 15/110 (13%) Query: 50 QRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 Q ++ +++ + + + ++ L Sbjct: 30 QSIVASIKETADKLKQDQATRGDLKILDR-------ALKELRYAFKVF-----TPYRKQR 77 Query: 109 QLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 ++ V GS + F +A I +G GI AH A Sbjct: 78 KVTVFGSARTNPDDPSYQQALQFGRRMAEEKWMIVTGAGPGIMEAAHVGA 127 >UniRef50_B4U9G4 Putative uncharacterized protein n=3 Tax=Aquificaceae RepID=B4U9G4_HYDS0 Length = 247 Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 46/174 (26%), Gaps = 44/174 (25%) Query: 85 QLLA--TTDYPGAL--FVEG-ELHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRG 137 +L T L FV G + + S + GS + G Sbjct: 12 RLKEGDTWRIFKILSEFVSGFDTLSHVSPAVTFFGSARFDENNFYYKKAYQLSYEFGKGG 71 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 + +G GI A++ A V+ GLN P+ Sbjct: 72 YNVITGGGPGIMEAANRGAKDAG-----VISVGLNIKLPKE------------------- 107 Query: 198 PLDVPPLAYN--------FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 P Y+ F R ++ S LV G++ AL Sbjct: 108 ---QKPNPYHTLSMSFEYFFVRKVMLIRYSTAYLVFPGGF--GTMDELSEALTL 156 >UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautilia profundicola AmH RepID=B9L6N5_NAUPA Length = 222 Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 108 FQLAVVGS-R-AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS R Y L+ +G I +G GI A+K A G++I Sbjct: 40 PAVSIFGSAREKPGHYYYEKATEISRGLSDKGYAIITGGGPGIMEAANKGAKVSIGLNI 98 >UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A6P7_9GAMM Length = 220 Score = 47.6 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R + + +A GV++ +G G+ ++ A G SI Sbjct: 41 PAISIFGSARVAEDSWEYRSAQSLGKLMAEAGVSVITGGGPGVMEAGNRGARSGEGRSI- 99 Query: 166 VLGNGLNTIHPRRHARLAASLLEQG 190 GLN P H +LA ++ Sbjct: 100 ----GLNITLP--HEQLANPYVDTD 118 >UniRef50_A3ZTY0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A3ZTY0_9PLAN Length = 284 Score = 47.6 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 38/135 (28%), Gaps = 33/135 (24%) Query: 119 SWYGERWGRLFCETLA-------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 S Y E R F + + I +G G+ A++ A + +I GL Sbjct: 107 SHYYEE-ARQFAKICSTNCHVDGQCDYVIVTGGGPGVMEAANRGAFEAEAPTI-----GL 160 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPL---DVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 N P + E +F R +K ++V Sbjct: 161 NITLPDEQHP--------NPYVTPELCFLFHYFAMRKMHFLVR-------AKALVVFPGG 205 Query: 229 LRSGSLVTARCALEQ 243 G+L AL Sbjct: 206 Y--GTLDELFDALTL 218 >UniRef50_C4LHU2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4LHU2_CORK4 Length = 322 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 40/135 (29%), Gaps = 26/135 (19%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH- 106 A+ ++ WL ++ SE FVEG Sbjct: 39 HARSTTDQRLLDVQKDADWLHTDPWRVLRIQSE----------------FVEGFGALAEI 82 Query: 107 SFQLAVVGSRAH---SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + V GS S Y ++ L G + +G G+ A++ + G+S Sbjct: 83 PRAVTVFGSARAEVDSPYYKKGVE-VGRALHEAGYGVITGGGPGLMEAANRGCAEAGGLS 141 Query: 164 IAVLGNGLNTIHPRR 178 I GL P Sbjct: 142 I-----GLGIELPHE 151 >UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteria RepID=Q020S9_SOLUE Length = 267 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 39/130 (30%) Query: 119 SWYGERWGRLFCETLAT---------RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 S Y R+ + L + SG GI A++ A + G ++ Sbjct: 68 SEY-YEQARVLAKMLTEWSVQFTNGTYRFVVCSGGGPGIMEAANRGASEAGGKTV----- 121 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFP-----LDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P +FP D+ + F R + L+K ++V Sbjct: 122 GLNIGLPFE-----------------QFPNPYITPDLSFEFHYFFMRKFWFAYLAKALVV 164 Query: 225 VEAALRSGSL 234 G+L Sbjct: 165 FPGGF--GTL 172 >UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHN5_LIBAP Length = 95 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 294 PENSFYSPDQQDVALPFP-ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ + +D + G P V LLEL+LAG + Sbjct: 19 HTKNINITHYPEYTQCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLC 78 Query: 353 AVPGGYVRL 361 P G V L Sbjct: 79 HHPEGKVSL 87 >UniRef50_C8N6B1 Methionyl-tRNA formyltransferase n=3 Tax=Proteobacteria RepID=C8N6B1_9GAMM Length = 332 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 33/220 (15%) Query: 108 FQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS R + + + R + L+ G ++ SG G+ A++ A Sbjct: 136 PSVSIFGSARLPAEHPVCQQTREIAKRLSDAGFSVVSGGGPGVMEAANQGAYAGEKG--- 192 Query: 166 VLGNGLNTIHPRR-HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 L GLN P + + EF +F R + + +V Sbjct: 193 -LSVGLNIQLPHEQSSNQFQDISL-------EF--------RHFFSRKVMFVKYANAYVV 236 Query: 225 VEAALRSGSLVTARCALEQ-----GREVFALPGPIGNPGSEGPHWLIKQG--AILVTEPE 277 + G+L L R++ + +G+ G ++ A + + E Sbjct: 237 MPGGF--GTLDELAEILVLIQTGKSRKIPVI--LVGSDFWRGLLAWMEATMVAQGLIKAE 292 Query: 278 EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV 317 ++ A FY + + LL + Sbjct: 293 DMQLMTLVDDADAVVAAILDFYEGREFAPSAEEERLLRQL 332 >UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWI1_THEON Length = 315 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 1/81 (1%) Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 L G + + + + +++A + + +AE+ G +V Sbjct: 231 LLGAGGVYGYFLYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSII 290 Query: 342 LLELELAGWIAAV-PGGYVRL 361 L E+E G I V G R+ Sbjct: 291 LREMEEKGLITRVKEGRTYRI 311 >UniRef50_C6LDA4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6LDA4_9FIRM Length = 169 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 33/167 (19%) Query: 105 LHSFQLAVVGSRA-HSWYGERWGRLFCETL---ATRGVT-ITSGLARGIDGVAHKAALQV 159 + V G R + G T SG A G+D + L+ Sbjct: 1 MEGKTCCVTGHRDLPQKEINHVKTALRREIDSAVADGFTRFMSGFADGVDQYFAEIVLEK 60 Query: 160 NGVS------IAVLGNGLNTIHPRRHARLAA-----SLLEQGGALVS---EFPLDVPPLA 205 + IAV+ + +R L A +LE +V E+ V Sbjct: 61 K-KTNPALELIAVIP------YQKRLDSLMAKGRTYEMLEACADVVVMQEEYHPSV---- 109 Query: 206 YNFPRRNRIISGLSKGVLVV-EAALRSGSLVTARCALEQGREVFALP 251 + RNR + S V+ V + + G++ T R A + + + +P Sbjct: 110 --YSHRNRYMVEHSDRVIAVYDGREKGGTVRTIRFAHQMKKVLREIP 154 >UniRef50_Q0RCV0 Lysine decarboxylase family protein n=94 Tax=Bacteria RepID=Q0RCV0_FRAAA Length = 319 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 7/75 (9%) Query: 108 FQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V GS + GR LA G + +G G ++ A + G+S+ Sbjct: 128 RAVTVFGSARITADDPIYAQGRRLGAALAEAGFAVITGGGPGAMEAVNRGAQEAGGLSV- 186 Query: 166 VLGNGLNTIHPRRHA 180 GL P Sbjct: 187 ----GLGIELPFEQR 197 >UniRef50_C7DH06 Rossmann fold nucleotide-binding protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH06_9EURY Length = 187 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 34/191 (17%) Query: 104 ALHSFQLAVVGSRAHSWYGERW---GRLFCETLATRGVTITSGLARGID---GVAHKAAL 157 Q+ V+GS A Y + E +A +G + G + D A + A Sbjct: 1 MPRRLQIGVMGSAADLKYAKEAERAAERMGELIAKKGGILVFGAEKDYDSLSTAACRGAK 60 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + G+++ V + ++ G + P + R ++ Sbjct: 61 KGGGLTVGV------------TYGKRKDIYQKEG-VDVIVPCGME----RGGGREFVLVL 103 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPG------PIGNPGSEGPHWLIKQGAI 271 V+ V SG+L A + + AL G + +G ++ Sbjct: 104 ACDAVIGVSGG--SGTLNELAVAYQADIPLIALQGFGGWADDMAGKFFDG---RKRRQVY 158 Query: 272 LVTEPEEILEN 282 PEE +E Sbjct: 159 PAKTPEEAVEE 169 >UniRef50_C7H8R4 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C7H8R4_9FIRM Length = 191 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 33/158 (20%) Query: 117 AHSWYGERWGRLFCETLATRGVT-ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 + + GVT +G+A G+D A + L + + Sbjct: 44 RCTSLKSVMRDQIVALIENEGVTHFITGMALGVDMYAAEIVLDLKSK------------Y 91 Query: 176 PRRHARLAASLLEQGGAL-VS----------------EFPLDVPPLAYNFPRRNRIISGL 218 P H L +++ + A+ S E L +RNR + Sbjct: 92 P--HITLESAIPCETQAIKWSVASRERYYNIAAKCDKETMLQREYTPDCMDKRNRYMVDH 149 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFAL-PGPIG 255 + +L V SG+ T R A ++G+ + + P + Sbjct: 150 ADYILAVWNGCPSGTGNTVRYAHKKGKSIIVINPVSLD 187 >UniRef50_B5VZV5 Putative uncharacterized protein n=2 Tax=Arthrospira RepID=B5VZV5_SPIMA Length = 355 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 25/150 (16%) Query: 32 SHIDAVVLQQTGLT-LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT 90 I+ ++ + L + R LS + +S + + ++ +L Sbjct: 15 REINELIDELPELKHEKWILRSLSSLVRIAQSEIE---SLDWKILS-------AAVLDME 64 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGI 148 + H ++ + GS S ++ +G + +G GI Sbjct: 65 QGFEIFY-----PYRHVRKICIFGSARTSPKAPEYDMAVELARSMTQQGFMVLTGAGGGI 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 A+ A GLN P Sbjct: 120 MEAANLGAGAERSF-------GLNIKLPFE 142 >UniRef50_C0VRT6 Putative uncharacterized protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VRT6_9CORY Length = 329 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 63/198 (31%), Gaps = 40/198 (20%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 GSR ++Y + R E LA RG+ + G + G+ G AL G V+ Sbjct: 155 GSR--TFY-QDVARELGEQLADRGIKVVYGGGSAGLMGEMASGALAHGGDVHGVMA---- 207 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 LA G + + P R + L+ G L + + G Sbjct: 208 -------RDLADREQAYEGL------PQLDI-VDSIPERIARMEELADGFLALPGGV--G 251 Query: 233 SLVTARCAL------EQGREV--FALPGP-------IGNPGSEG-PHWLIKQGAILVTEP 276 +L AL + V F + G + N SEG I+V Sbjct: 252 TLSELFDALTNQQIGSHQKPVILFNVEGYWNPLVTLLENTISEGFTQKKYVDALIVVETV 311 Query: 277 EEILENLQFGLHWLPDAP 294 E++E L+ Sbjct: 312 AELVEKLESWRAPGEKWQ 329 >UniRef50_A3ZQ30 Rossmann fold nucleotide-binding protein-like n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ30_9PLAN Length = 204 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 24/155 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL---QVNGVSI 164 + V+GS +G + +A G + +G G ++ + G I Sbjct: 11 PIVGVMGSGKK-VHG-DLAKELGVWIAQAGYNLLTGGGGGEMKAVSESFFNVEERAGRVI 68 Query: 165 AVLGN-------GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 ++ +P + RN + Sbjct: 69 GIIPGDASGGSYSRRLHYPNE----FVEIPIYTHL------PQTGYEGMQVASRNHVNIL 118 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 S V+ + G+ AL GR V AL G Sbjct: 119 SSDIVVALPGTK--GTAAEVCLALRYGRPVIALLG 151 >UniRef50_Q72BV5 Decarboxylase family protein n=8 Tax=Bacteria RepID=Q72BV5_DESVH Length = 218 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 47/166 (28%), Gaps = 26/166 (15%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS L G + +G G+ +K A + G S+ Sbjct: 39 KCVSIFGSARVPRDSPLYADTEAIARLLVQAGYGVITGGGPGLMEAGNKGAFEAGGESV- 97 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GL+ P S + F R + + +V+ Sbjct: 98 ----GLHIHLPFEQ--------------DSNQYIKTRCDFRYFFVRKLMFIKYALAYVVM 139 Query: 226 EAALRSGSLVTARCA--LEQGREVFALPGPIG-NPGSEGPHWLIKQ 268 + G++ A L Q R + P + + G I+ Sbjct: 140 PGGM--GTIDELSEAFVLAQTRRIKPFPIILYKSEFWNGLLDWIRD 183 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L + + RI L++ GL R A+ + + Sbjct: 559 LDDLPGVGPVRKRRILEHFGTPQAFLEASLEELEAVPGLPGRVAREIHARLHR 611 >UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SPW3_NOCSJ Length = 156 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%) Query: 107 SFQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +AVVG + LA G + +G G+ G A + A G +I Sbjct: 5 RRYVAVVGPADGARPTDLEHAEAVGRMLAEHGAIVLTGGHHGVMGAAARGARTGGGTAIG 64 Query: 166 VLGN 169 ++ Sbjct: 65 LMPG 68 >UniRef50_B9XPZ5 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPZ5_9BACT Length = 343 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 22/143 (15%) Query: 103 HALHSFQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 H ++ + GS + + F + +A G + +G GI H+ A N Sbjct: 72 PYAHKRKVTIFGSARTQPTKVEYQQAVEFGKKIADAGFMVITGAGGGIMHAGHEGAGLEN 131 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G N P A +++ L++ F R I S Sbjct: 132 SF-------GANIRLPWEQG--ANPVIQDDKKLIT---------FKYFFTRKLIFIRHSD 173 Query: 221 GVLVVEAALRSGSLVTARCALEQ 243 + + G++ AL Sbjct: 174 AIALFPGGF--GTMDEGYEALTL 194 >UniRef50_B9M108 Putative uncharacterized protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M108_GEOSF Length = 132 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 35/139 (25%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGV---TITSGLARGIDGVAHKAALQVNGVSIA 165 ++ V GSR + Y R + RG+ I G+ARGID +A + A + +I Sbjct: 2 KVIVAGSRGITDY--ELIRTALDEARNRGLNITAIVDGMARGIDCLASRYATENGIDNIR 59 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V + + G L RN ++ ++ ++ V Sbjct: 60 VAAD-------------WKRYGKGAGIL-----------------RNEQMAEIADALIAV 89 Query: 226 EAALRSGSLVTARCALEQG 244 G+L CA +G Sbjct: 90 WDGKSPGTLHMIECAKAKG 108 >UniRef50_B3DWL4 3-isopropylmalate dehydrogenase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWL4_METI4 Length = 377 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 16/113 (14%) Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW--GRLFCETLATRGVTIT 141 L ++ + GS W + F + G + Sbjct: 91 QSLKEIRYAQSIF-----QPYRSFKKVTIFGSARIRPQSPEWLIAKDFARLMVESGFMVI 145 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 +G GI A A + GLN P +++ L+ Sbjct: 146 TGGGEGIMEAAQFGAGKDKSF-------GLNIRLPFEQKP--NEVIDGDPKLI 189 >UniRef50_Q8TUS6 ERCC4-like helicase-nuclease n=1 Tax=Methanopyrus kandleri RepID=Q8TUS6_METKA Length = 741 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 15/53 (28%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L I + + R+ + + G+ R+A+ F Sbjct: 689 LSCIPGVGPELARRLLDEFGSIGDVVNASPSELKRVKGIGERKAREIRRFLWS 741 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 45.2 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 4/55 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFPRKSI 60 L I + + H I+ L + G++ A+R + Sbjct: 644 LQEIPGIGPSRKRALLHHFGTLKEIERASLGDLGKVPGISAESAKRIFDYFHPQP 698 >UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ49_9RHOB Length = 77 Score = 44.9 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 24/73 (32%) Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + D A E+L +G D + + V + +LE+ G + Sbjct: 5 PETPAPEARDPAQTAALHREILDRLGPAPIAEDQLIRDLSRAARHVTPAITQLEMQGRVR 64 Query: 353 AVPGGYVRLRRAC 365 GG + L Sbjct: 65 RQAGGLLALDPGA 77 >UniRef50_A0YHC8 Lysine decarboxylase family protein n=3 Tax=Bacteria RepID=A0YHC8_9GAMM Length = 226 Score = 44.9 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + L+ G+ + +G GI ++ A G+S+ GLN PR Sbjct: 57 QQAETLGRILSASGLAVITGGGPGIMEAVNRGAFGGKGMSV-----GLNIDLPRE 106 >UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=B1JB72_PSEPW Length = 482 Score = 44.9 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 65/232 (28%), Gaps = 61/232 (26%) Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADS-EFYPPQLLATTDYPGALFVEGELHALHSF 108 + + R+ E + L++ + D P L A + Sbjct: 238 EEAARYRRRKQELHIQDLKRFGIQTLLVDEYADIPAILRAIEEQFL------------KK 285 Query: 109 QLAVVGSRAHSWYG-------ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + GS YG + +L G + +G G+ A Sbjct: 286 TIFISGS--AEEYGDWKKDEALDFIHSLSSSLVKHGYRVVNGFGWGVGSAVINGA----- 338 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR------RNRII 215 L+ I+ + + ++ FP + R R+I Sbjct: 339 ---------LDAIY--SNPEKFSE----DQLVMRPFP--QVASQGQDLKVLWQQYRERMI 381 Query: 216 SGLSKGVLVVEAALRSGSLVTA-------RCALEQGREVFALPGPIGNPGSE 260 + + V G +V+A A+ QG +P PIG G + Sbjct: 382 ALSGIALFVFGNKTEGGEIVSAPGVEREFDIAVRQG----VVPVPIGATGYK 429 >UniRef50_B1XPM0 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XPM0_SYNP2 Length = 119 Score = 44.5 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 22/99 (22%) Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 A + A G+++ +L + H LA S+ D+ Sbjct: 1 MAAASQGAKVAGGLTVGILPG-------KNHQGLADSV-------------DIAICTDLG 40 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 RN + + V+ V + L G++ AL+ + V Sbjct: 41 HGRNNVNVLSADVVVAVGSGL--GTVSEIALALKNHKPV 77 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 44.5 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 8/63 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E L I + + + L G++ AQ+ + Sbjct: 630 MTENE----LDGIPGIGPTRKRALLKHFGSAKAVSRAGLSDLRAVDGISAAMAQQIYDWY 685 Query: 57 RKS 59 Sbjct: 686 NDR 688 >UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria RepID=UVRC_HAHCH Length = 612 Score = 44.5 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 L ++ + + ++ +I+ L++ G++ AQ + + Sbjct: 560 LDAVPGIGPKRRRDLLNYFGSVRNIERASLEEIKRVPGISEVIAQTIYAAFHE 612 >UniRef50_C1ZHC5 Predicted Rossmann fold nucleotide-binding protein n=3 Tax=Planctomycetaceae RepID=C1ZHC5_PLALI Length = 359 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 91/341 (26%), Gaps = 61/341 (17%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLL 87 + + Q+ + + FL+ R+ + + + +I Sbjct: 11 GEAEEHTLISEQEPEIGGK--SAFLAQIREVADKLAHDQATRGDIKIIAR-------AAK 61 Query: 88 ATTDYPGALFVEGELHALHSFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLA 145 ++ V GS R + + F +A + +G Sbjct: 62 ELRYAFKVF-----TPYRLHRKVTVFGSARTPANHPDYLSSVEFGRLMARNNWMVLTGAG 116 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 GI AH A + G+N + P A S+++ LV+ Sbjct: 117 SGIMEGAHVGA---GLP----MSMGVNILLPFEQQ--ANSVIDGDPKLVT---------F 158 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSE-G 261 F R + ++V G+L L G+ + P Sbjct: 159 RFFFTRKLMFVKEVHAIVVYPGGF--GTLDELFETLTLIQTGKRDMLPIVLVDQPDCNYW 216 Query: 262 P-------HWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 H L+++G + P + L + E + + L+ Sbjct: 217 CALQDFIRHQLLERG---LISPAD-LSLYRIVHSPAAAVSEVLSFYRVYNSMRFVKQNLV 272 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D + ++ +++ ++G I Sbjct: 273 LRLNH-PIS-DELLDQLNVEFADLL-------ISGRIERTA 304 >UniRef50_A8RVS6 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=A8RVS6_9CLOT Length = 180 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 18/118 (15%) Query: 143 GLARGIDGVAHKAALQVNGVS-------IAVLGN-GLNTIHPRRHARLAASLL--EQGGA 192 G A G+D A + L + + I V+ G ++ P + L+ Sbjct: 53 GGALGVDMWAGEQLLTLRAQTGYEDIKIIVVIPFIGYDSKWPDQSRHRLKKLIQNANDSI 112 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV---EAALRSGSLVTARCALEQGREV 247 ++S ++ +RN + ++ ++ V + LRSG+ T AL G+ + Sbjct: 113 VIS-----HSADVSSYKKRNYYMVDHAEYIIGVFDNQKKLRSGTAQTVNYALRNGKAI 165 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 22/82 (26%), Gaps = 10/82 (12%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 + + ++ + A + Q + + ++ + + L + Sbjct: 191 VPGVGPKTAAKLIDQFGSLEQLFANLEQVSA--AKLREKLAAHRQD------AQLARRLI 242 Query: 73 HLIPADSEFYPPQLLATTDYPG 94 L D P L T P Sbjct: 243 RL--KDDLELPTSLDDYTLPPP 262 >UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRE6_DESVM Length = 762 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L + + + + + A ++ G+ R+A++ ++ Sbjct: 703 LQRVEGVGPKTARLLWDRFGTLAAMRAASEKELAEVPGIGPRRARQIHQRLKE 755 >UniRef50_Q937Z9 Putative uncharacterized protein n=1 Tax=Mycobacterium avium RepID=Q937Z9_MYCAV Length = 257 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 108 FQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS R + + R L G I +G GI A++ A + SI Sbjct: 68 RAVSFFGSARTPPDHPYYQLARTLAARLGALGFDIITGGGAGIMEAANRGAREAGVRSIG 127 >UniRef50_B9L9L9 DapE downstream ORF 2 n=1 Tax=Nautilia profundicola AmH RepID=B9L9L9_NAUPA Length = 165 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%) Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 LA G T+ G G+ K + G I + + I P+ + L + Sbjct: 23 ELGRFLAENGFTVKCGGYGGLMEAVSKGVKEGGGEVIGITLEYFDEIRPK-NPYLTKRI 80 >UniRef50_A0L3X5 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3X5_MAGSM Length = 173 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 23/111 (20%) Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 I SG G+D A AAL L G + R + G + P Sbjct: 5 IISGGQTGVDRGALDAALSQG------LLCG---GWVPANRR------AEDGPI----PP 45 Query: 200 DVPPL---AYNFPRRNRIISGLSKGVLVV-EAALRSGSLVTARCALEQGRE 246 P + RNR+ S L++ + AL G+ + A GR Sbjct: 46 RYPVRALVRGGYLVRNRLNVQDSDATLIITDGALSGGTARSVEFARRLGRP 96 >UniRef50_D1AD65 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=D1AD65_THECD Length = 156 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 59/171 (34%), Gaps = 26/171 (15%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+AV G S ERW R LA RG + G G+ A A G + +L Sbjct: 4 QIAVCGPGECSPREERWARQVGRLLAERGAVVLCGGYGGVMAAAAAGARAAGGTVVGLLS 63 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP--RRNRIISGLSKGVLVVE 226 ++ GA D+ + RN ++ + V+VV Sbjct: 64 G-----------------ADRQGA-----CPDLTVVVPTGLGQARNAVLVNSADAVIVVG 101 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 + G+L A+ +G V AL G + GP ++ A E Sbjct: 102 GSW--GTLSELAHAMRRGTPVVALGGWRVIDAAGGPVPGVRHAATPAEAVE 150 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 26/78 (33%), Gaps = 5/78 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FPRK 58 + L +SI + + +A + L + G+ + A ++ F + Sbjct: 500 LDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMSIEGIGPKVAASIVAFFSKH 559 Query: 59 SIESSLCWLEQPNHHLIP 76 + +++ ++ Sbjct: 560 ENREEIRRMQELGVQVLS 577 >UniRef50_Q31PX5 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=Q31PX5_SYNE7 Length = 172 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 + S ++A++GSR + + L G + + A+G + + A++ Sbjct: 25 IQQTSSKRVAILGSRHVPITHQHLIEMMSYALVLAGNRLMTSGAQGTNAAVIRGAMRADP 84 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLL------EQGGALVSEFPLDVPPLAYNFPRRNR 213 N +++ +L L+ PR ++ E ++E N+ Sbjct: 85 NLLTV-ILPQSLDRQ-PRESREQLEKVIHLVEHAENDHLSLAEASTLC----------NQ 132 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 I + ++ L T R A +Q V Sbjct: 133 AIVTRCQQLICFAFHDSHTLLETCRYAEDQHHLV 166 >UniRef50_C5EYK0 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C5EYK0_9HELI Length = 212 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 114 GSRAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 G+R + + LA G +I +G GI A+ A + + ++ GLN Sbjct: 30 GARIPKENKNYKKIQKLAYELAKEGYSIMTGGGPGIMEAANFGAFKAKSKNPNIVSIGLN 89 Query: 173 TIHPRR 178 P Sbjct: 90 IQLPHE 95 >UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococcus RepID=Q5HR58_STAEQ Length = 188 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 126 GRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGNGLN 172 + +A +G + G + GI G L+ G +I V+ L+ Sbjct: 22 AYELGKYMAEQGYELVFGAGSVGIMGAIQDGILEHGGKAIGVMPKMLD 69 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 6/69 (8%), Positives = 19/69 (27%), Gaps = 5/69 (7%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLE-QPN 71 I + + +I L + + F ++ ++ ++ N Sbjct: 189 IKGIGPKTAAALLQEFGSLENILE---NVDKLKGKLKESFKELDKEQLQRMKEIIKLDAN 245 Query: 72 HHL-IPADS 79 + I + Sbjct: 246 IEINIKIED 254 >UniRef50_A8SHQ2 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHQ2_9FIRM Length = 143 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 17/122 (13%) Query: 143 GLARGIDGVAHKAALQVNGVS-------IAVLG-NGLNTIHPRRHARLAASLLEQGG-AL 193 G A G+D A + L++ + I L G + + + +++ + Sbjct: 20 GGALGVDMWAAEEILRLKEQTGYADIELIVALPFEGHDLKWDAVNRQRLQTIIHNAAKCV 79 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA---ALRSGSLVTARCALEQG-REVFA 249 V A ++ +RN + + +L V +RSG+ T AL+Q R +F Sbjct: 80 VV----GQNGDASDYKKRNYYMVDHADFLLAVYDNDRKIRSGTGQTVNYALKQNLRIIFL 135 Query: 250 LP 251 P Sbjct: 136 HP 137 >UniRef50_C3RB76 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=C3RB76_9BACE Length = 179 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 19/153 (12%) Query: 106 HSFQLAVVGSRAHS----WYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVN 160 S LA G R G+T SG+A G D +A + L + Sbjct: 25 KSKSLAFTGHRTIPIERQDEIRARLVEAVSVACKSGITCFYSGMAMGFDLMAAETVLSLK 84 Query: 161 G-----VSIAVLGNGLNTI-HPRRHARLAASLLEQ--GGALVSEFPLDVPPLAYNFPRRN 212 G IAV+ P ++ Q ++SE+ RRN Sbjct: 85 GRYPDIRLIAVVPFRRQNCRWPSIEKERYQKIISQADRVIVLSEYYF-----KGCLLRRN 139 Query: 213 RIISGLSKGVLVV-EAALRSGSLVTARCALEQG 244 + S GV+ + G+ T R A ++G Sbjct: 140 DFMLEHSCGVIAFYDGKPYGGTFYTCREAGKRG 172 >UniRef50_Q0F1L2 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q0F1L2_9PROT Length = 250 Score = 43.7 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 18/156 (11%) Query: 101 ELHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + V+GS + +A RG+ + +G G+ + + Sbjct: 51 NKAPGMRLTVGVMGSADSNQDDDIKDQVYQLGVAIAERGLVLITGACPGLPYACAEGVRE 110 Query: 159 VNGVSIAVLGN-GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G S+ + L+ H S + L+ R Sbjct: 111 AGGTSVGISPALSLD-----EHVHKYYSPADAYDVLI---YTGSG-----LMGREVTNIR 157 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 S V++V RSG+L A ++G+ + L G Sbjct: 158 SSDMVIIVGG--RSGTLGEFAIAFDEGKLIGVLRGS 191 >UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YM75_NOCDA Length = 257 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 20/48 (41%) Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 LL V D V V+ +A G V L ELE AG + GG Sbjct: 3 HQGLLDAVTDGVQRVEDLARELGISPSTVRRGLGELERAGKVVRTHGG 50 >UniRef50_Q46GU3 Cyanobacteria-specific protein n=7 Tax=Cyanobacteria RepID=Q46GU3_PROMT Length = 172 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L ++A +GSR L +LA G +I + ++G++ +A L VN Sbjct: 25 LKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEGHSIITSGSQGVNAAVIRAVLDVNP 84 Query: 162 VSIAV-LGNGLNT 173 + V L L+ Sbjct: 85 SLLTVLLPQSLDR 97 >UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglobus fulgidus RepID=O30253_ARCFU Length = 208 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 L +I + ++ + I + + G+ ++A+ F R Sbjct: 157 LTAIPGIGEKKAEKLLDYFGSIQRIANASIAELKRVDGIGEKKAREIYRFFR 208 >UniRef50_A7I2M0 Putative uncharacterized protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I2M0_CAMHC Length = 197 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 52/196 (26%), Gaps = 36/196 (18%) Query: 102 LHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + + + GS + LA G I +G + A+K A Sbjct: 16 IDFGNDKFVTFFGSARFDDENFFVKEAEKLAYKLAKAGFAIITGGGESVMKAANKGANLA 75 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 ++ G N + P + E F L +S Sbjct: 76 GRRNL-----GFNIVLPHEQHS-NEFIDES-------FVFSTFALRKYALM-------VS 115 Query: 220 KGVLVVEAALRSGSLVTARCALEQGRE------------VFALPGPIGNPGSEGPHWLIK 267 ++ G++ L + F LP S + IK Sbjct: 116 DFFVIFPGGF--GTMDEFFEILTLNQVKFKNNKIYLYNSKFWLPLIEFFRVSLLKNKTIK 173 Query: 268 QGAILVTEPEEILENL 283 + + + + + +E++ Sbjct: 174 ENDLKLFKISDDIEDI 189 >UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YWX8_NOCFA Length = 294 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 25/67 (37%) Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + SP + L E PV +AER G L EL+LAGW VP Sbjct: 8 AARSPSPPTRRVVEILTLLAGAAEPLPVAAIAERLGIARATATAVLAELDLAGWAVRVPD 67 Query: 357 GYVRLRR 363 RL Sbjct: 68 RGYRLGP 74 >UniRef50_B0CDG4 Decarboxylase family protein n=16 Tax=Cyanobacteria RepID=B0CDG4_ACAM1 Length = 365 Score = 43.3 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 36/146 (24%), Gaps = 25/146 (17%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPG 94 VL Q Q + E L L + ++ L Sbjct: 20 FLDVLPQLKHGPLMVQALETVLNM-AEEDLDRL---DWKILT-------AALQDLEQGFQ 68 Query: 95 ALFVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 H ++++ GS + F + +G + +G GI Sbjct: 69 VFH-----RYRHIRKISIFGSSRLPPDSPAYQMAVDFARCVTQQGFMVMTGAGGGIMEAG 123 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRR 178 ++ A GLN P Sbjct: 124 NQGAGAEKSF-------GLNIQLPFE 142 >UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=UVRC_LACCB Length = 602 Score = 43.3 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ---QTGLTLRQAQRFL 53 RL I + +++ + I L+ + G++ + AQ Sbjct: 542 RLEGIKGVGPKTRLKLLRKFKTINKIKEAPLEDIQELGISKKVAQALK 589 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 43.3 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 17/73 (23%), Gaps = 6/73 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 + L I + +A I ++ G+ A + + Sbjct: 601 LVALS-IRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVIAAALKEWFAEDWHR 659 Query: 63 SL-CWLEQPNHHL 74 + + + Sbjct: 660 EIVDTWAEDGVRM 672 >UniRef50_B6BN03 Lysine decarboxylase family protein n=3 Tax=Campylobacterales RepID=B6BN03_9PROT Length = 256 Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 34/174 (19%) Query: 97 FVEGELHALHS-FQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 FV+G + V GS + Y ++ + L +RG I +G GI A Sbjct: 31 FVKGFDELGELGPTVTVFGSARTKKTHPYYKK-AQKLSSMLGSRGFNIMTGGGPGIMEGA 89 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY-NFPRR 211 +K A++ + + + LA P L++ F R Sbjct: 90 NKGAIKHH-----------DVESIGLNIDLAFEQTAN--------PFTTKDLSFDYFFSR 130 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQ-------GREVFALPGPIGNPG 258 ++ S ++ G+L AL G +VF + P Sbjct: 131 KVMLVKYSIAYVIFPGGY--GTLDELFEALTLIQTRKVTGVKVFVVGVDFYKPL 182 >UniRef50_C0QXQ1 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXQ1_BRAHW Length = 221 Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 2/61 (3%) Query: 107 SFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +++ GS S + + L I +G GI ++ A N SI Sbjct: 38 KNAVSIFGSARTSQDHPHYKLAYETAKLLGENKYDIITGGGPGIMEAGNRGAFDANAGSI 97 Query: 165 A 165 Sbjct: 98 G 98 >UniRef50_Q2N8C1 Decarboxylase family protein n=6 Tax=Sphingomonadales RepID=Q2N8C1_ERYLH Length = 193 Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 22/132 (16%) Query: 113 VGSRAHS-WYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNG 170 GS R LA R + + G + G+ G AA + G I V+ Sbjct: 8 CGSATPDDPRYIELAREVGAGLAERDIGVVYGGGKLGLMGAVANAAKEAGGEVIGVIPEA 67 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L ++ +A ++ L++ + F LS G + + + Sbjct: 68 L------VNSEVANHNCDE---LITV--SGMHERKQKFTD-------LSDGFVTIPGGV- 108 Query: 231 SGSLVTARCALE 242 G++ A+ Sbjct: 109 -GTMDELWEAMS 119 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 15/73 (20%), Gaps = 5/73 (6%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIE-SSLCWL 67 I + +A W I A ++ G+ ++ + Sbjct: 646 IRHVGPVAARALADWFGSLDAIRAASSEELAAVEGVGPVIGAELQAWFDVDWHVDIVDSW 705 Query: 68 EQPNHHLIPADSE 80 + Sbjct: 706 TRAGVRFATPGHP 718 >UniRef50_A2SSU9 Transcriptional regulator, ArsR family n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SSU9_METLZ Length = 217 Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 36/88 (40%) Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAER 330 L+ E+++ENL+ + + + + ELL + +++ Sbjct: 113 RLLDSREKLIENLEAVEKDIDEMMGDVIVNGRTVFQNNIEAELLLALVYAPLTPIELSDT 172 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGY 358 +G+ +PEV L L G++ + G Y Sbjct: 173 SGRSIPEVTAALRSLASKGYVHSEGGRY 200 >UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRC_CARHZ Length = 607 Score = 42.9 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 2/54 (3%), Positives = 16/54 (29%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 L + + ++ + ++ +++ + ++ +E Sbjct: 554 LEQVEGIGPKRRKQLLNKFGSIKNLREATVEEITAVPGITREIAERLKELLEME 607 >UniRef50_B1AJN2 Putative uncharacterized protein n=14 Tax=Ureaplasma RepID=B1AJN2_UREP2 Length = 236 Score = 42.9 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 56/190 (29%), Gaps = 17/190 (8%) Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALF 97 L+ G + ++ ++ L + I E YP + P L+ Sbjct: 9 SLKYKGDWSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILY 68 Query: 98 VEGELHALHSFQLAVVGSRAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 + L + ++ S Y ++ +D + ++ Sbjct: 69 YSTTVEWLDKKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVV------LDTLINR-L 121 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA-YNFPRRNRII 215 + + + G I+ ++ + + +++SE P D +R + Sbjct: 122 ISLKARICIITDEG---IYSSKNIKYLSYC---NVSVISEIPKDYNSNKITQDLKR--LA 173 Query: 216 SGLSKGVLVV 225 S +L V Sbjct: 174 CASSDHILCV 183 >UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organisms RepID=Y4923_PSEAE Length = 195 Score = 42.9 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 23/131 (17%) Query: 107 SFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVS 163 + V S S + LA RG+T+ G A G+ G AAL G Sbjct: 3 LRSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGGEV 62 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I ++ L + + G E + ++ L+ + Sbjct: 63 IGIIP-----------QSLQEAEIGHKGLTRLEVVDGMHARKAR-------MAELADAFI 104 Query: 224 VVEAALRSGSL 234 + L G+L Sbjct: 105 ALPGGL--GTL 113 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 42.9 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 18/67 (26%), Gaps = 5/67 (7%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFPRK-SIESSLCWL 67 I + +A I + G+ A+ + + R + L Sbjct: 524 IPMVGQKTAKILAEHFKSLEAIAEASYETLKDIPGIGPEIARSIVEYFRNPKTREIIEKL 583 Query: 68 EQPNHHL 74 ++ L Sbjct: 584 KKAGVKL 590 >UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H041_9FIRM Length = 626 Score = 42.9 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 7/57 (12%), Positives = 18/57 (31%), Gaps = 4/57 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 L +I + + I+ ++ G+ L+ A + F + + Sbjct: 570 LENIEGVGPKKRAALLKKWGTIEAIEKASAEELEATEGINLKLALKIKEFFKNYRQK 626 >UniRef50_B4CX49 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX49_9BACT Length = 245 Score = 42.9 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 36/191 (18%) Query: 101 ELHALHSFQLAVVGSRAH---SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +F++ + GS + + L G I +G G+ A++ A Sbjct: 44 RRTTRQNFRVTIFGSARIKPGTP-AYEGVKKLAAELVGLGCDILTGGGPGLMQAANEGAY 102 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARL-AASLLEQGGALVSEFPLDVPPLA-YNFPRRNRII 215 V GLN + L E + + ++F +I Sbjct: 103 S-------VDATGLNRSI-GINVELPFEQ--EVNPFVSQAYGHRTFFSRLHHF-----MI 147 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPGSE-------GPHWLI 266 + S +VV + G+L+ A + Q R+++ P + G ++ Sbjct: 148 A--SDAFVVVPGGI--GTLLEMSMAWQLLQVRKLYNTPLILVGKMWADLVDWGKGC--ML 201 Query: 267 KQGAILVTEPE 277 +G+ L + + Sbjct: 202 DEGSELASAAD 212 >UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=UVRC_DESAA Length = 603 Score = 42.9 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 6/52 (11%), Positives = 16/52 (30%), Gaps = 4/52 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFP 56 L S+ + + + + G+++++AQ L Sbjct: 550 ALDSVPGIGEKRKKALLRHFGSIKRLKEASPEDIAQVPGISVKRAQEILEAL 601 >UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelagibacter RepID=UVRC_PELUB Length = 611 Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 L I + + + +++ + G+ + A++ +F + Sbjct: 559 LDQIDGIGSIRKRALLNHFGSARAVESASFDEIKSVEGVEEKVAKKIYNFFHE 611 >UniRef50_B0SEG9 Rossmann fold nucleotide-binding protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEG9_LEPBA Length = 254 Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 5/64 (7%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S W + + + R + I +G GI ++ A + S+A LN + Sbjct: 74 AREVSRLISEWADVLKQEIPDRNLHICTGGGPGIMEAGNRGAKEAGSKSVA-----LNIV 128 Query: 175 HPRR 178 P Sbjct: 129 LPHE 132 >UniRef50_B5IAE6 ERCC4 domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAE6_9EURY Length = 221 Score = 42.5 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 19/63 (30%), Gaps = 7/63 (11%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLS 54 M D E W L S+ + + I + + G+ ++A++ Sbjct: 160 MSDEE-WKIYALSSLPYIGEKIAKALLEHFGSIEKIARANIVELKKVEGIGDKKARQIYR 218 Query: 55 FPR 57 Sbjct: 219 IFH 221 >UniRef50_A0B6S9 Transcriptional regulator, ArsR family n=1 Tax=Methanosaeta thermophila PT RepID=A0B6S9_METTP Length = 204 Score = 42.5 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 23/175 (13%) Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 +LE G + E D Y RN +V+E AL S G Sbjct: 49 VLEAAGLI--ECYRDERRRKYFRLARN----------VVLEVALAS---------HSYGV 87 Query: 246 EVFAL--PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 V+AL P + ++ + L E + + + + + + + ++ Sbjct: 88 RVYALSCPSMERESDCRDLRAIHEELSALAAEMDRLRMMMADVATRELELRQRAMRAIEE 147 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ELL ++ + +++AER P V L LE G + G + Sbjct: 148 CATDEIEEELLFSLLSGSSTEEMLAERLKMPPAVVRESLARLESRGLVRFENGSW 202 >UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDH0_KOSOT Length = 574 Score = 42.5 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 8/63 (12%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLE 68 RL I + + ++I ++ ++ + RK +E L W + Sbjct: 520 RLDDIPGIGPKRKRALVRAFGSVTNIKKASKEEL---MKVIK-----NRKVVEQILAWTK 571 Query: 69 QPN 71 + Sbjct: 572 KQG 574 >UniRef50_B3V6E4 ATP-dependent RNA helicase EIF-4A family n=1 Tax=uncultured marine group II euryarchaeote KM3-136-D10 RepID=B3V6E4_9EURY Length = 928 Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 7/56 (12%), Positives = 15/56 (26%), Gaps = 4/56 (7%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L S+ ++ R+ + + G+ A+ L R Sbjct: 873 LYLLESLPNIGPTTAKRLLDHFKSIEVLTQADEAELCQVTGIGPTSARAILEVLRD 928 >UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZQ2_9AQUI Length = 69 Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D+ ++L ++ + T D + E+ P +++T L LEL I G Sbjct: 4 KKDENVLPDLDEIEKQILDSIENN-THFDNLLEKLSIPADQLITILFNLELKNLIKNENG 62 >UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermoproteaceae RepID=A3MWN8_PYRCJ Length = 248 Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG---YVRLRRACHV 367 +A V +AE G P ++ T L +LE G +A GG R R V Sbjct: 21 YVALVEQGPKSARELAEALGIPYTKIYTYLYKLENLGVVAKEGGGRPYRYRARPPAEV 78 >UniRef50_UPI0001C4211A Hef nuclease n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C4211A Length = 842 Score = 42.5 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 4/52 (7%), Positives = 14/52 (26%), Gaps = 4/52 (7%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 + S+ ++ + + +Q G+ + A+ Sbjct: 772 LFIIESLPNIGPVHAKNLLEHFGSVKAVLQADEKQLQEVDGIGKKTAKSIKE 823 >UniRef50_D2LHD4 Putative uncharacterized protein n=2 Tax=Bacteria RepID=D2LHD4_RHOVA Length = 193 Score = 42.2 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 29/125 (23%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNT 173 SR R LA + + G A G+ G+ A ++ G V+ Sbjct: 11 SRGADPAYAEAARQLGAALAEADIGLVYGGAAVGLMGILADACMEAGGTVTGVIP----- 65 Query: 174 IHPRRHARLAASLLEQGGA----LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 L + G +VS R +++ LS G + + + Sbjct: 66 ------EALIRKEVGHAGLSDLRIVSSM-----------HERKALMAELSDGFVALPGGI 108 Query: 230 RSGSL 234 G+L Sbjct: 109 --GTL 111 >UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=UVRC_METBU Length = 604 Score = 42.2 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSFPRKSIE 61 L +I + + + + I +++ G++ A+R F ++ +E Sbjct: 546 LDTIPGIGASRKKALLNHFSSIEQIRHASVEELTAVEGISKGLAERIVAHFNKERVE 602 >UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistaceae RepID=D1B5F2_THEAS Length = 479 Score = 42.2 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 18/54 (33%), Gaps = 4/54 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKS 59 L I + ++ ++ + L + G+ R A+R ++ Sbjct: 424 LEDIPGVGKAKASQLLSRFGSVRNVASASLDELASMRGIGERLAKRISDHLKEE 477 >UniRef50_B9DK81 Lysine decarboxlyase family protein n=57 Tax=Staphylococcus RepID=B9DK81_STACT Length = 190 Score = 42.2 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 127 RLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGNGLN 172 + +A G + G + GI G L G +I V+ L+ Sbjct: 25 YELGKYMAEHGYELVFGAGSVGIMGAIQNGVLDHGGSAIGVMPRSLD 71 >UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadales RepID=UVRC_GEOSF Length = 622 Score = 42.2 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 16/54 (29%), Gaps = 4/54 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKS 59 L +I + + I L++ G++ A+ ++ Sbjct: 555 LEAIPGIGIKRRKELLRHFGSLKKISEATLEELRQVQGISATVAESLWKHLHEN 608 >UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7ABK9_THEAQ Length = 232 Score = 42.2 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 48/160 (30%), Gaps = 32/160 (20%) Query: 218 LSKGVLVVEAALRS-GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 LS +V+E+ GSL+ A VF G + + + G + GA Sbjct: 85 LSFASVVLESRWALVGSLIGAG-------VVFW--GNLTS-MALG--LAHRAGAE----A 128 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPF--------------PELLANVGDEVT 322 +E+ E + P + + L + Sbjct: 129 KEVAEVHAPKVAPAPREEALPHRVLNGESGPAGEAVGEVGGLELDDRDQRLFQALRTGPK 188 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 V+A G V+ +L LE G + G RL+ Sbjct: 189 GPSVLARELGVSPSTVLYRLKRLEGLGLVEK-ADGVYRLK 227 >UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae RepID=UVRC_THELT Length = 558 Score = 42.2 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 3/50 (6%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL---TLRQAQRFLSFP 56 L I + ++ +I + LQ+ + + A LS Sbjct: 509 LDEIPGIGPKRKKKLIEAFGSVKNIRSATLQEIAEVLGSRKLAAEILSRL 558 >UniRef50_A8LF72 Rossmann fold nucleotide-binding protein-like protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF72_FRASN Length = 165 Score = 42.2 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 Q+AV+G + E LA G+T+ +G G+ A + A G ++ +L Sbjct: 2 RQVAVIGPGEATPEQETDAERLGAGLARLGLTVVTGGLGGVMAAASRGARAAGGRTLGLL 61 Query: 168 GN 169 Sbjct: 62 PG 63 >UniRef50_D1PQA8 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQA8_9FIRM Length = 168 Score = 42.2 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 9/115 (7%) Query: 139 TITSGLARGIDGVAHKAALQVN---GVSIAVLGN---GLNTIHPRRHARLAASLLEQGGA 192 T +G+ARG D A + LQ + G + L + + + Sbjct: 48 TFITGMARGFDLWAAEMVLQKKERYKQIHLICATPFPGFERSWQEKWRLLYSKIAREADL 107 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 V + F +RN + S V+ G+ T A G EV Sbjct: 108 RV---AISDRYYRGCFQKRNEWMVRHSMLVIAAYNGQPGGTRNTMDFAERCGVEV 159 >UniRef50_B0KVB7 Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB7_9BACT Length = 422 Score = 41.8 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 23/175 (13%) Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + LA G I +G G+ + + A + +AV T HP + R Sbjct: 260 AKETARLLAENGYGIVNGGGPGVMRASTEGAHEGGAGVLAV------TYHPNKPKRHFEG 313 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 + D+ ++ R +I+ S ++ ++ + S Sbjct: 314 TDPENH-------FDLEVKTLDYFDRTKILLQTSDIHVIFRGSIGTLSEFGMSWENSYIH 366 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGA----------ILVTEPEEILENLQFGLHWL 290 E P + G I++ + T P+E+LE ++ + L Sbjct: 367 EPNNKPIILFGDHWRGILKSIEENMSVRGGETEIIKICTTPQEVLEYIKSIENKL 421 >UniRef50_Q9YC15 Repair endonuclease XPF n=1 Tax=Aeropyrum pernix RepID=Q9YC15_AERPE Length = 248 Score = 41.8 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 4/52 (7%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLS 54 L S + RI + G+ ++A+ Sbjct: 165 LYILQSFPGIGRRTAERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKK 216 >UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria RepID=UVRC_PROMM Length = 667 Score = 41.8 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 4/64 (6%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFPRKSIESSL 64 RL I L + + I Q GL A + ++ + +L Sbjct: 604 RLTDIPGLGPRRVRDLLAHFQSIDAIQLASVQQISQAPGLGPALALQVWTYFHPEADIAL 663 Query: 65 CWLE 68 + Sbjct: 664 EEVA 667 >UniRef50_A6DMD6 Excinuclease ABC subunit C n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMD6_9BACT Length = 486 Score = 41.8 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 5/55 (9%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-----TGLTLRQAQRFLSFPRKS 59 L I + + + + I Q GL + A L + +K+ Sbjct: 432 LDDIPGIGKKRKMTLLNHFGSVREIRKASPQDIAEAVPGLGEKSAHMILEYLKKN 486 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 41.8 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 22/90 (24%), Gaps = 12/90 (13%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIE- 61 + L I + +A + ++ G+ A +F ++ Sbjct: 699 LVALS-IRHVGPPTAFTLAKHFKTLDALADASAEELEQIDGIGAEIADSIATFFEEARMP 757 Query: 62 -----SSLCWLEQPNHHLIPADSEFYPPQL 86 L + + E P L Sbjct: 758 GNWRGRVLEAWKAAGVGMST-HDEGLPQTL 786 >UniRef50_O34359 Uncharacterized SPBc2 prophage-derived protein yoqJ n=3 Tax=root RepID=YOQJ_BACSU Length = 171 Score = 41.8 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 40/145 (27%), Gaps = 23/145 (15%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHK--AALQVNGVSIA-VLGNGL---NTIHP 176 +G A G D A L+ I ++ + + Sbjct: 14 LAVIEELITK--ENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIATPFKEQDKVWS 71 Query: 177 RRHARLAASLLEQGGALV-----------SEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +L ++ E P + P +RN + S+ ++ V Sbjct: 72 ADQKMWYKRMLNVADEIINVEELDKYKVSGEKPGEFSPAKMQ--KRNEYMIDHSEAIVAV 129 Query: 226 EAALRSGSLVTARCALE--QGREVF 248 +SG+ A + G +++ Sbjct: 130 YDGSKSGTRNCLNYAKKTYLGHQLW 154 >UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales RepID=UVRC_FRASC Length = 705 Score = 41.8 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 4/56 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 L + L + + I A +Q G+ R A ++ +S Sbjct: 625 ALDEVPGLGDTRRKALLRHFGSVAKIRAASAEQIAQVSGIGPRTAAAIVTALARSA 680 >UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=UVRC_CLOTH Length = 625 Score = 41.8 bits (97), Expect = 0.047, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 16/54 (29%), Gaps = 4/54 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKS 59 L +I + + I + G++ AQ+ + R+ Sbjct: 571 LDNIEGVGPKRKKELIRHFGSVKAIKEAEPGEIAKVKGISRDLAQKIYDYFRQQ 624 >UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=A7XFC5_9CAUD Length = 195 Score = 41.4 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 17/49 (34%) Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 + A++GSR L+ V SG A G+D K Sbjct: 14 LRRCALIGSRKAPSDILIMASTIGRVLSENRVVAHSGGAYGMDNAFMKY 62 >UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8H7_9NEIS Length = 274 Score = 41.4 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 18/83 (21%), Gaps = 2/83 (2%) Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD--EVTPVDVVAERAGQPVPEVVTQ 341 P D ++ V + ++ G P V Sbjct: 10 GPARPDAPRVFPEPPAMHDTDTPFERGLAVIQAFDPCGTPLSVSEIGQKTGIPRASVARC 69 Query: 342 LLELELAGWIAAVPGGYVRLRRA 364 L L+ G++ L Sbjct: 70 LYTLQQLGFVRPSADKRFALTPK 92 >UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus RepID=UVRC_DICT6 Length = 599 Score = 41.4 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 18/54 (33%), Gaps = 4/54 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L I + M + + ++ L+ G++ + A++ + Sbjct: 544 HLDKIPGVGEKRMKILLEAFSTLENLKKASLEDLKKVPGISEKIAEKIYLYFHD 597 >UniRef50_B9KC51 UvrABC system protein C n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC51_THENN Length = 503 Score = 41.4 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 6/50 (12%), Positives = 15/50 (30%), Gaps = 3/50 (6%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL---TLRQAQRFLSFP 56 L I + ++ I + +++ + A+R L Sbjct: 454 LDEIPGVGPIRKKKLLEHFGSIESIRSASVEEIARVIGSAEVARRILERL 503 >UniRef50_Q7NCS7 Gll2901 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCS7_GLOVI Length = 150 Score = 41.4 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 + S Q+A++GSR ++ + LA G I + A G + + ++ Sbjct: 3 IQQTASKQIAILGSRHVPLGHQQLIEILSYALALTGNRILTSGAAGTNQAVIRGVVRADP 62 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLL 187 N +++ +L L+ PR +++ Sbjct: 63 NALTV-ILPQSLDRQ-PRETRDQLENII 88 >UniRef50_A8MCE8 Putative uncharacterized protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCE8_CALMQ Length = 174 Score = 41.4 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 21/133 (15%) Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + + + L TI G G+ V A+ + +L P + Sbjct: 14 DEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLIL--------PIEN 65 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 ++ A++ F R+ ++ S ++ + A+ G+++ A Sbjct: 66 ----ENIEAPKDAVIVR-------TGMEFRERSVVLVRSSDSLIAIGGAV--GTIMEALL 112 Query: 240 ALEQGREVFALPG 252 A G+ L G Sbjct: 113 AYAMGKPTIVLKG 125 >UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3237F Length = 647 Score = 41.0 bits (95), Expect = 0.064, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 13/47 (27%), Gaps = 4/47 (8%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF 52 L S+ + + A ++ GL + A+ Sbjct: 592 LDSLPGVGPARKRALLKHFGSPEAFLAATREELEAVPGLPGKVARDL 638 >UniRef50_D1C6N8 RecA-family ATPase-like protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6N8_SPHTD Length = 377 Score = 41.0 bits (95), Expect = 0.064, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 2/88 (2%) Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG--DEVTPVDVVAERAGQ 333 P I + + P N D + + + T D +A+ Sbjct: 255 PLSIAMDFGADRVTFAEVPINDDRFAGIDDHLPTGERVFRVLMQYERGTTPDALAQELEL 314 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRL 361 V L L+ AG + V G R+ Sbjct: 315 SAGTVRNALTALKKAGRVEQVERGVWRV 342 >UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator n=3 Tax=Actinomycetales RepID=A4FKG2_SACEN Length = 256 Score = 41.0 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%) Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + +D +AER G V+ L LE AG++ + RL Sbjct: 11 VLTALATGQQTLDQLAERLGVHKSTVLRLLRTLESAGFVRRDGVHHYRL 59 >UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBR3_OLICO Length = 249 Score = 41.0 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 17/48 (35%) Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 E + +A+R ++ L+ LE G I G L A Sbjct: 30 SAEPQTLAEIAQRTDLYKSTILRLLVTLEGRGLIVRWSDGRYALGPAA 77 >UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFS3_DESAA Length = 310 Score = 41.0 bits (95), Expect = 0.071, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 31/224 (13%) Query: 167 LGNGLNTI--HPRRHARLAASLLEQGG----------------ALVSEFPLDV--PPLAY 206 L +GL I + +++ L G +++ Sbjct: 84 LHSGLGRIAAYIKQNHPDYNLALLTNGALFYLEDVRKDAAMTDLVIASIDAGSQEKFQQV 143 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG---REVFALPGPIGNPGSEGP- 262 N P N + + G+ V A RE+ + G I + Sbjct: 144 NRPHPNLTVPAMVDGLTAFRNEYSGQLWVEVFLAQGINDGDRELELIRGAIDRIKPDKVQ 203 Query: 263 -HWLIKQGAILVTEPE--EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 + L + G P E LE + L + + S + + + ++LA + Sbjct: 204 INTLDRPGTEDWVHPSSPETLERARAILGG-EIIAKAAAASKETKALYNKEEQILATIRR 262 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP---GGYVR 360 V +A+ G +V L LE AG + P G + R Sbjct: 263 RPCTVQDLAQALGMHEAQVRKHLAGLEQAGKVVLQPQTRGMFYR 306 >UniRef50_B7G6N1 Predicted protein (Fragment) n=3 Tax=Eukaryota RepID=B7G6N1_PHATR Length = 164 Score = 41.0 bits (95), Expect = 0.071, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + ++G+R S+ ++ L L G + + A G G A + AL+ Sbjct: 16 IQQQGPQKYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHGAAIRGALRAER 75 Query: 162 V 162 Sbjct: 76 P 76 >UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteriaceae RepID=D2RRA5_9EURY Length = 597 Score = 40.6 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 5/51 (9%), Positives = 14/51 (27%), Gaps = 4/51 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFP 56 L + + + R+ ++ G+ + A+ S Sbjct: 547 LDDVPGVGPETRKRLLGRFGSVENVREASVDDIESVEGIGEKTAETIKSRL 597 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 40.6 bits (94), Expect = 0.087, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 19/72 (26%), Gaps = 6/72 (8%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIE 61 I + L I + +A W I + ++ G+ A L + Sbjct: 601 ILVALS-IRHVGPVAARALAGWFGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWH 659 Query: 62 SSL-CWLEQPNH 72 + + Sbjct: 660 REIVDRWRKAGV 671 >UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=Actinomycetales RepID=A8L2Z0_FRASN Length = 117 Score = 40.6 bits (94), Expect = 0.092, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + PV+ + E+ G P V L L AG + P G RL Sbjct: 11 DPHRRRVLELLRAGPRPVNELVEQLGLSQPGVSKHLRILREAGLVTVRPDGQRRL 65 >UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=Frankia sp. EuI1c RepID=D1VJF9_9ACTO Length = 165 Score = 40.6 bits (94), Expect = 0.097, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 1/54 (1%) Query: 304 QDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + LLA + + G +V L ELE G + P Sbjct: 43 DGLRGYHYRLLAALEQWGPASQADLGRDTGIDRSDVTGALTELEARGLVERRPD 96 >UniRef50_C4V2J7 Exodeoxyribonuclease V alpha subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2J7_9FIRM Length = 723 Score = 40.6 bits (94), Expect = 0.098, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 7/67 (10%) Query: 13 ISSLYGDDMVRIAHWVAKQS-HIDAVVLQQT----GLTLRQAQRFLSF--PRKSIESSLC 65 I + RI + + ++ G+ + A++ + + + + Sbjct: 102 IEGIGPATARRIVERFGTDTLKVIESTPRRLTEVTGIGPKTAEKITASYHRQNELRDIML 161 Query: 66 WLEQPNH 72 WLE+ Sbjct: 162 WLEEHGV 168 >UniRef50_A8VQ13 Peptidase M20 n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQ13_9BACI Length = 179 Score = 40.6 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 5/65 (7%) Query: 108 FQLAVV-GSRAHSW--YGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVS 163 + V GSR S Y + +A R +T+ G A G L G Sbjct: 2 KAITVFCGSREGSDPVYMRE-AYQLGKAMAERELTLVYGGAGIGCMRAMADGVLDHGGKV 60 Query: 164 IAVLG 168 I V+ Sbjct: 61 IGVMP 65 >UniRef50_UPI0001C41FEF hypothetical protein mru_1379 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41FEF Length = 179 Score = 40.6 bits (94), Expect = 0.100, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Query: 114 GSRAHSWYGERWGRLFCETLATRGV-TITSGLARGIDGVAHKAALQVNGVSIAVLG 168 GS E +A RG + G + GI G K A+ +G + + Sbjct: 9 GSTQIKSKYTDEAYKLGEEIAKRGHDLVFGGGSTGIMGAVSKGAIDNHGKVLGIAP 64 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium ... 396 e-109 UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 ... 394 e-108 UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SM... 392 e-107 UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacte... 391 e-107 UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacte... 381 e-104 UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=De... 381 e-104 UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromon... 380 e-104 UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Mo... 380 e-104 UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium ... 380 e-104 UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes R... 378 e-103 UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobac... 378 e-103 UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Al... 377 e-103 UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotener... 376 e-103 UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacter... 375 e-102 UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaer... 375 e-102 UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding prote... 374 e-102 UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcu... 374 e-102 UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Ta... 372 e-101 UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces mari... 372 e-101 UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi ... 371 e-101 UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Ca... 371 e-101 UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobac... 371 e-101 UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Ric... 370 e-101 UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=De... 370 e-101 UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas au... 368 e-100 UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermac... 368 e-100 UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf pos... 368 e-100 UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria Rep... 367 e-100 UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculu... 366 e-100 UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=He... 366 e-100 UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y... 366 1e-99 UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus... 365 1e-99 UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=... 365 2e-99 UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcace... 365 2e-99 UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter... 364 4e-99 UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS ... 363 6e-99 UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicro... 363 7e-99 UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involve... 363 8e-99 UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium... 363 8e-99 UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteob... 362 1e-98 UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Provide... 361 2e-98 UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomac... 361 2e-98 UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella ... 359 1e-97 UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. ... 359 1e-97 UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostri... 359 1e-97 UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteo... 358 1e-97 UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella ko... 358 1e-97 UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister in... 358 2e-97 UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces... 358 2e-97 UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatro... 358 2e-97 UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Per... 357 3e-97 UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7... 357 4e-97 UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacter... 357 4e-97 UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia ... 357 4e-97 UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria Rep... 356 5e-97 UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia R... 356 7e-97 UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas Re... 356 1e-96 UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3... 355 1e-96 UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicro... 355 1e-96 UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerof... 355 1e-96 UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomacu... 354 2e-96 UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2... 354 2e-96 UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula st... 354 2e-96 UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1... 353 4e-96 UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria Rep... 353 5e-96 UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia ... 353 6e-96 UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium elige... 352 1e-95 UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Col... 351 2e-95 UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus naso... 351 2e-95 UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alt... 350 5e-95 UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella ... 350 5e-95 UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacter... 350 5e-95 UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 350 6e-95 UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes R... 349 7e-95 UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteri... 349 8e-95 UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteob... 349 1e-94 UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevi... 348 1e-94 UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivi... 348 2e-94 UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Sy... 348 2e-94 UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacteri... 348 2e-94 UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6F... 348 2e-94 UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiob... 347 3e-94 UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium ... 347 4e-94 UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula m... 347 4e-94 UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis ... 346 6e-94 UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia Re... 346 7e-94 UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex de... 346 7e-94 UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula ba... 346 8e-94 UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bac... 346 1e-93 UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter R... 346 1e-93 UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Ta... 346 1e-93 UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding prote... 345 1e-93 UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga... 345 2e-93 UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candida... 344 2e-93 UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibr... 344 2e-93 UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus S... 344 2e-93 UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacter... 344 3e-93 UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobac... 344 4e-93 UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involve... 343 6e-93 UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalob... 343 6e-93 UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacte... 343 9e-93 UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostri... 342 1e-92 UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteri... 342 2e-92 UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella f... 341 2e-92 UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostri... 341 2e-92 UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium ... 341 2e-92 UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteoba... 341 2e-92 UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicro... 341 2e-92 UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiacea... 341 3e-92 UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillu... 341 3e-92 UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibactera... 341 3e-92 UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas ... 340 4e-92 UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 ... 340 4e-92 UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium p... 339 7e-92 UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostri... 339 7e-92 UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding prote... 338 2e-91 UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 338 2e-91 UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas ... 338 2e-91 UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C... 338 3e-91 UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium... 338 3e-91 UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium... 338 3e-91 UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Ca... 338 3e-91 UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales ... 336 6e-91 UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7M... 335 1e-90 UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus... 335 1e-90 UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpet... 335 2e-90 UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogace... 335 2e-90 UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Po... 335 2e-90 UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium ros... 334 2e-90 UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimo... 334 3e-90 UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellac... 334 3e-90 UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=De... 334 3e-90 UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geoba... 334 4e-90 UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotro... 333 6e-90 UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcu... 333 7e-90 UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2T... 333 8e-90 UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchin... 331 2e-89 UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostri... 331 2e-89 UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium ... 331 2e-89 UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacte... 331 2e-89 UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_4... 331 2e-89 UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultu... 331 3e-89 UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Ri... 331 3e-89 UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_H... 331 3e-89 UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteob... 330 5e-89 UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=... 330 6e-89 UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydro... 330 6e-89 UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 ... 330 6e-89 UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=... 329 9e-89 UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rh... 329 1e-88 UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillu... 329 1e-88 UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular org... 328 3e-88 UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandens... 328 3e-88 UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae... 328 3e-88 UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteri... 327 5e-88 UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 326 6e-88 UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coproco... 326 7e-88 UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus... 326 8e-88 UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus... 326 8e-88 UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Ca... 325 1e-87 UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacter... 325 1e-87 UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizob... 325 1e-87 UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Co... 325 1e-87 UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibri... 325 1e-87 UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacte... 325 1e-87 UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaeros... 324 2e-87 UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algor... 324 3e-87 UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepI... 324 4e-87 UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacte... 324 5e-87 UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecali... 324 5e-87 UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bactero... 323 8e-87 UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobuty... 323 1e-86 UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=... 322 1e-86 UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=A... 322 1e-86 UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular or... 321 2e-86 UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium ... 321 2e-86 UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding prot... 320 4e-86 UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga l... 320 4e-86 UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobaci... 320 4e-86 UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacte... 320 5e-86 UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter... 320 6e-86 UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobi... 320 6e-86 UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibri... 320 7e-86 UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria Re... 319 7e-86 UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacte... 319 1e-85 UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelag... 319 1e-85 UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Rumin... 319 1e-85 UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococ... 318 2e-85 UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 512... 318 3e-85 UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia bal... 317 5e-85 UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfo... 317 6e-85 UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundu... 316 6e-85 UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacte... 316 7e-85 UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bact... 316 8e-85 UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiacea... 316 1e-84 UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderia... 315 2e-84 UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coproco... 315 2e-84 UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacte... 315 2e-84 UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas ... 315 2e-84 UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms Rep... 314 3e-84 UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttle... 314 3e-84 UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finego... 314 3e-84 UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphing... 314 3e-84 UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=... 314 3e-84 UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding prote... 314 4e-84 UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostri... 314 5e-84 UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacte... 314 5e-84 UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostri... 313 5e-84 UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma... 313 5e-84 UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacte... 313 7e-84 UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Ch... 313 9e-84 UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Seleno... 313 9e-84 UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexac... 313 1e-83 UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidet... 312 1e-83 UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=De... 311 2e-83 UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira ... 311 3e-83 UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding prote... 311 3e-83 UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. ... 311 4e-83 UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobact... 311 4e-83 UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteob... 310 6e-83 UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella R... 309 1e-82 UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerot... 309 1e-82 UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus... 309 1e-82 UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium ... 309 1e-82 UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella ... 308 2e-82 UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminoc... 307 3e-82 UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ... 307 3e-82 UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Ca... 306 7e-82 UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostri... 306 7e-82 UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Micro... 306 1e-81 UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacte... 305 2e-81 UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribac... 304 2e-81 UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Ro... 304 4e-81 UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacter... 303 5e-81 UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella R... 302 1e-80 UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobi... 302 1e-80 UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilu... 302 2e-80 UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranu... 302 2e-80 UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia Rep... 300 4e-80 UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibri... 300 5e-80 UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistip... 300 7e-80 UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus ... 299 8e-80 UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Ta... 299 9e-80 UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=... 298 2e-79 UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacter... 298 2e-79 UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mo... 298 2e-79 UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5... 297 3e-79 UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria Rep... 297 3e-79 UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxy... 297 4e-79 UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding prote... 297 4e-79 UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispor... 297 4e-79 UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevote... 296 6e-79 UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia... 296 8e-79 UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus Re... 296 9e-79 UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus ... 296 1e-78 UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=B... 295 2e-78 UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding prote... 294 3e-78 UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_... 294 4e-78 UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfov... 293 6e-78 UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepI... 292 1e-77 UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melani... 292 1e-77 UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium ... 292 1e-77 UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales ... 292 1e-77 UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Bra... 291 2e-77 UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involve... 291 3e-77 UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula berm... 290 6e-77 UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium... 290 6e-77 UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus cu... 290 6e-77 UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacil... 290 7e-77 UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella ... 289 1e-76 UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID... 289 1e-76 UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Ru... 289 1e-76 UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 288 2e-76 UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alp... 288 2e-76 UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria Re... 288 2e-76 UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacill... 287 4e-76 UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibri... 287 6e-76 UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella ... 287 6e-76 UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga ol... 287 6e-76 UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia... 286 8e-76 UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminoc... 286 9e-76 UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus ... 285 1e-75 UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces ... 285 2e-75 UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus Re... 284 3e-75 UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis... 284 4e-75 UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porph... 284 5e-75 UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomyceta... 284 5e-75 UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella fl... 283 5e-75 UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacteri... 283 6e-75 UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Ca... 283 6e-75 UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobactera... 282 1e-74 UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 ... 282 1e-74 UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobac... 282 1e-74 UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_D... 282 1e-74 UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyce... 282 2e-74 UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E... 281 3e-74 UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemma... 281 4e-74 UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bactero... 281 4e-74 UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus Re... 280 5e-74 UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella Re... 280 7e-74 UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding prote... 280 7e-74 UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces ... 279 1e-73 UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Coryneba... 279 1e-73 UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacte... 279 1e-73 UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobact... 279 1e-73 UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibri... 278 2e-73 UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding prote... 278 3e-73 UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cel... 277 3e-73 UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyc... 277 3e-73 UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillu... 277 4e-73 UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteo... 277 6e-73 UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter... 276 7e-73 UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium j... 276 1e-72 UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachl... 276 1e-72 UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho ... 276 1e-72 UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatim... 276 1e-72 UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus pla... 276 1e-72 UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mu... 276 1e-72 UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisel... 275 2e-72 UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacter... 275 2e-72 UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella pa... 274 4e-72 UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Baci... 274 5e-72 UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus ... 273 6e-72 UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium l... 273 6e-72 UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella ... 272 1e-71 UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 355... 272 2e-71 UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC 271 2e-71 UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerov... 270 6e-71 UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax... 270 7e-71 UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomyceta... 269 1e-70 UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=... 269 1e-70 UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding prote... 269 1e-70 UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU 269 1e-70 UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus sal... 269 2e-70 UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=... 268 2e-70 UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conex... 267 3e-70 UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinom... 267 5e-70 UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho ... 267 7e-70 UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacil... 266 7e-70 UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomyceta... 266 1e-69 UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma wh... 266 1e-69 UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genit... 266 1e-69 UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides... 266 1e-69 UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidob... 265 2e-69 UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiacea... 264 3e-69 UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermoph... 264 3e-69 UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax... 264 5e-69 UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria Rep... 263 8e-69 UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oc... 262 1e-68 UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Ac... 262 1e-68 UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA... 262 1e-68 UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Coryneba... 262 1e-68 UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella... 262 2e-68 UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propioni... 261 3e-68 UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas... 261 3e-68 UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcace... 261 4e-68 UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides... 261 5e-68 UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Ocea... 260 8e-68 UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclass... 260 8e-68 UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Ato... 259 8e-68 UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus rum... 259 1e-67 UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. ... 259 1e-67 UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia deni... 259 2e-67 UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidob... 259 2e-67 UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA... 256 1e-66 UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter... 255 2e-66 UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collins... 255 2e-66 UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavo... 255 2e-66 UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces c... 254 3e-66 UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA... 254 4e-66 UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevi... 254 4e-66 UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococ... 254 5e-66 UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcine... 254 5e-66 UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillu... 253 8e-66 UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteri... 253 9e-66 UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidi... 252 1e-65 UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydroge... 252 2e-65 UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostri... 250 6e-65 UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella ... 249 1e-64 UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter... 249 1e-64 UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacte... 248 2e-64 UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heli... 248 3e-64 UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS 248 3e-64 UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding prote... 247 4e-64 UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ... 247 5e-64 UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardner... 247 6e-64 UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haem... 246 8e-64 UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9... 245 2e-63 UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID... 244 4e-63 UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli sub... 243 7e-63 UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus Re... 240 4e-62 UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxoba... 240 5e-62 UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus Rep... 240 5e-62 UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family... 240 7e-62 UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=St... 239 2e-61 UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pes... 239 2e-61 UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longu... 238 2e-61 UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bact... 237 6e-61 UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacter... 235 1e-60 UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1... 234 3e-60 UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Lep... 234 3e-60 UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacte... 234 3e-60 UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID... 234 5e-60 UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacte... 234 6e-60 UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=... 232 1e-59 UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdema... 231 3e-59 UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothr... 231 4e-59 UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacter... 230 5e-59 UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacteriu... 230 6e-59 UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clav... 229 1e-58 UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostri... 229 2e-58 UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=... 228 2e-58 UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum ... 226 9e-58 UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonel... 225 1e-57 UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding prote... 225 2e-57 UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex... 225 2e-57 UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax... 224 4e-57 UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacter... 224 5e-57 UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR 224 6e-57 UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum... 223 8e-57 UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacter... 222 1e-56 UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio ... 222 1e-56 UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escheri... 222 2e-56 UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipe... 220 5e-56 UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia ex... 220 6e-56 UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:... 219 1e-55 UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacter... 219 1e-55 UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 T... 219 2e-55 UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivor... 218 2e-55 UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter... 218 3e-55 UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinoge... 217 8e-55 UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protei... 215 1e-54 UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding prote... 215 2e-54 UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis... 215 2e-54 UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirill... 215 3e-54 UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding prote... 214 3e-54 UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 Re... 214 4e-54 UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyroc... 214 4e-54 UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira bifl... 213 9e-54 UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=... 212 1e-53 UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_... 211 3e-53 UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_R... 209 1e-52 UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrific... 209 1e-52 UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 ... 208 4e-52 UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinal... 207 4e-52 UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding prote... 207 5e-52 UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium... 207 8e-52 UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepI... 206 1e-51 UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1... 206 1e-51 UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacil... 204 3e-51 UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetal... 203 8e-51 UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longu... 203 1e-50 UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bac... 200 7e-50 UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU 200 7e-50 UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae Re... 199 1e-49 UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococca... 198 2e-49 UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii A... 198 4e-49 UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding prot... 196 1e-48 UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter Rep... 195 2e-48 UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulo... 194 4e-48 UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteoba... 193 7e-48 UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacter... 192 1e-47 UniRef50_UPI000169347A DNA processing protein DprA, putative n=1... 192 1e-47 UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidob... 192 2e-47 UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH 192 2e-47 UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium Re... 191 4e-47 UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A... 190 9e-47 UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisn... 190 9e-47 UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinoge... 189 2e-46 UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding prot... 188 3e-46 UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative D... 187 4e-46 UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepI... 187 4e-46 UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter ... 187 8e-46 UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagi... 184 4e-45 UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammapr... 182 2e-44 UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammapr... 182 2e-44 UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfi... 180 7e-44 UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-... 178 2e-43 UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosu... 178 3e-43 UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesie... 176 1e-42 UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vanniel... 176 1e-42 UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfo... 175 2e-42 UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bac... 175 2e-42 UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=ca... 173 7e-42 UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanoba... 172 2e-41 UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter ... 172 2e-41 UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus ... 171 4e-41 UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bili... 170 6e-41 UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acineto... 170 7e-41 UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteri... 169 2e-40 UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candi... 167 5e-40 UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavoba... 167 6e-40 UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YR... 167 8e-40 UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID... 166 1e-39 UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfo... 163 1e-38 UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis... 163 1e-38 UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microco... 160 6e-38 UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=... 158 3e-37 UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinel... 156 1e-36 UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Vei... 155 3e-36 UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma Re... 152 2e-35 UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involve... 152 2e-35 UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein ... 150 1e-34 UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesioc... 150 1e-34 UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 149 2e-34 UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involve... 147 6e-34 UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobact... 143 1e-32 UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycopla... 142 2e-32 UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involve... 142 2e-32 UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involve... 140 1e-31 UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pu... 138 3e-31 UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfo... 138 4e-31 UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bactero... 135 3e-30 UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mo... 134 4e-30 UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID... 133 1e-29 UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplas... 131 3e-29 UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involve... 129 2e-28 UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter p... 128 4e-28 UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma... 125 2e-27 UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec R... 120 1e-25 UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma ho... 120 1e-25 UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 T... 118 4e-25 UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax... 111 3e-23 UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax... 108 5e-22 UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 ... 107 7e-22 UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involve... 104 4e-21 UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Strepto... 101 4e-20 UniRef50_Q14PF7 Hypothetical dna processing protein smf n-termin... 97 8e-19 UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium El... 93 2e-17 UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseifl... 91 6e-17 UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding prote... 89 3e-16 UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobac... 89 3e-16 UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfuri... 88 4e-16 UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammapr... 88 4e-16 UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquific... 88 5e-16 UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota ... 87 8e-16 UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteri... 85 3e-15 UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfo... 85 4e-15 UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermop... 85 4e-15 UniRef50_Q1MRH8 Predicted Rossmann fold nucleotide-binding prote... 84 7e-15 UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root Re... 84 9e-15 UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus pl... 83 1e-14 UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacter... 83 2e-14 UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methano... 82 3e-14 UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax... 81 6e-14 UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-f... 80 1e-13 UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacteri... 80 1e-13 UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=... 80 2e-13 UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleoti... 80 2e-13 UniRef50_C4LHU2 Putative uncharacterized protein n=2 Tax=Bacteri... 80 2e-13 UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like pr... 78 4e-13 UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfu... 78 4e-13 UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteri... 78 6e-13 UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacter... 78 6e-13 UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycopla... 78 6e-13 UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermom... 77 9e-13 UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiob... 77 1e-12 UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduli... 77 1e-12 UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostri... 76 1e-12 UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinoco... 76 2e-12 UniRef50_D2QZI7 Putative uncharacterized protein n=1 Tax=Pirellu... 76 2e-12 UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Bur... 76 2e-12 UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms R... 75 3e-12 UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victiva... 75 3e-12 UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chloro... 75 4e-12 UniRef50_Q6MD50 Putative uncharacterized protein n=2 Tax=Bacteri... 75 4e-12 UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellula... 75 4e-12 UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protei... 75 6e-12 UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimi... 74 8e-12 UniRef50_C8N6B1 Methionyl-tRNA formyltransferase n=3 Tax=Proteob... 74 9e-12 UniRef50_Q0RCV0 Lysine decarboxylase family protein n=94 Tax=Bac... 73 1e-11 UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta pr... 73 2e-11 UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria Re... 73 2e-11 UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteri... 73 2e-11 UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding prote... 73 2e-11 UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteri... 73 2e-11 UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobaci... 73 2e-11 UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanoth... 72 3e-11 UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonprot... 72 3e-11 UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Strepto... 72 4e-11 UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=p... 72 4e-11 UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorob... 71 5e-11 UniRef50_Q254M4 Putative uncharacterized protein CF0492 n=2 Tax=... 71 5e-11 UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobact... 71 7e-11 UniRef50_B2UL52 Putative uncharacterized protein n=1 Tax=Akkerma... 70 9e-11 UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea l... 70 1e-10 UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like pr... 70 1e-10 UniRef50_B4U9G4 Putative uncharacterized protein n=3 Tax=Aquific... 70 2e-10 UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaero... 70 2e-10 UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostri... 68 4e-10 UniRef50_A6C3L6 Putative uncharacterized protein n=1 Tax=Plancto... 68 5e-10 UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellul... 68 6e-10 UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular orga... 68 6e-10 UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1... 68 8e-10 UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding prote... 67 1e-09 UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rick... 66 2e-09 UniRef50_UPI0001B520AA hypothetical protein ShygA5_29070 n=1 Tax... 66 2e-09 UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bactero... 66 3e-09 UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protei... 65 5e-09 UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 T... 65 6e-09 UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteri... 64 7e-09 UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protei... 63 1e-08 UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax... 63 1e-08 UniRef50_B5VZV5 Putative uncharacterized protein n=2 Tax=Arthros... 63 1e-08 UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma p... 62 3e-08 UniRef50_A0KCC4 Rossmann fold nucleotide-binding protein-like pr... 61 5e-08 UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A... 61 9e-08 UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfo... 60 1e-07 UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma p... 60 1e-07 UniRef50_C7H8R4 Putative uncharacterized protein n=4 Tax=Bacteri... 60 1e-07 UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautili... 60 1e-07 UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congreg... 60 1e-07 UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobiu... 60 1e-07 UniRef50_A3ZTY0 Putative uncharacterized protein n=2 Tax=Bacteri... 60 2e-07 UniRef50_C7DH06 Rossmann fold nucleotide-binding protein n=1 Tax... 60 2e-07 UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bactero... 59 3e-07 UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding prote... 59 3e-07 UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevote... 59 3e-07 UniRef50_Q47ZZ4 Putative uncharacterized protein n=1 Tax=Colwell... 58 4e-07 UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylo... 58 6e-07 UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax... 58 7e-07 UniRef50_C6LDA4 Putative uncharacterized protein n=2 Tax=Clostri... 56 2e-06 UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Lari... 56 2e-06 UniRef50_D0LPT5 Putative uncharacterized protein n=1 Tax=Haliang... 55 6e-06 UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bactero... 54 1e-05 UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrh... 53 3e-05 UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bactero... 52 4e-05 UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protei... 50 2e-04 UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D... 48 5e-04 UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermoc... 48 6e-04 UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candida... 46 0.001 Sequences not found previously or not previously below threshold: UniRef50_Q72BV5 Decarboxylase family protein n=8 Tax=Bacteria Re... 75 6e-12 UniRef50_C1ZHC5 Predicted Rossmann fold nucleotide-binding prote... 68 6e-10 UniRef50_A0YHC8 Lysine decarboxylase family protein n=3 Tax=Bact... 65 5e-09 UniRef50_C0QXQ1 Predicted Rossmann fold nucleotide-binding prote... 64 9e-09 UniRef50_C8RQ20 Lysine decarboxylase n=5 Tax=Actinomycetales Rep... 63 1e-08 UniRef50_B9XPZ5 Putative uncharacterized protein n=1 Tax=bacteri... 63 2e-08 UniRef50_Q937Z9 Putative uncharacterized protein n=1 Tax=Mycobac... 63 2e-08 UniRef50_B8DTD8 Predicted Rossmann fold nucleotide-binding prote... 63 2e-08 UniRef50_A9UTT7 Predicted protein n=1 Tax=Monosiga brevicollis R... 63 2e-08 UniRef50_B3DWL4 3-isopropylmalate dehydrogenase n=1 Tax=Methylac... 61 5e-08 UniRef50_Q0F226 Putative uncharacterized protein n=1 Tax=Maripro... 61 7e-08 UniRef50_D1KD30 Rossmann fold nucleotide-binding protein n=1 Tax... 59 2e-07 UniRef50_B6BN03 Lysine decarboxylase family protein n=3 Tax=Camp... 59 2e-07 UniRef50_A5GRY1 Predicted Rossmann fold nucleotide-binding prote... 59 3e-07 UniRef50_B0SEG9 Rossmann fold nucleotide-binding protein n=2 Tax... 59 3e-07 UniRef50_UPI0001C31CB6 hypothetical protein Cwoe_3171 n=1 Tax=Co... 59 3e-07 UniRef50_C5EYK0 Putative uncharacterized protein n=2 Tax=Helicob... 58 7e-07 UniRef50_A3YY44 Putative uncharacterized protein n=1 Tax=Synecho... 58 8e-07 UniRef50_B0CDG4 Decarboxylase family protein n=16 Tax=Cyanobacte... 57 9e-07 UniRef50_A9ITV3 Putative uncharacterized protein n=4 Tax=Bordete... 57 1e-06 UniRef50_A3ZQ30 Rossmann fold nucleotide-binding protein-like n=... 56 2e-06 UniRef50_D0DCS4 Decarboxylase family protein n=1 Tax=Citreicella... 56 2e-06 UniRef50_Q2W812 Predicted Rossmann fold nucleotide-binding prote... 55 4e-06 UniRef50_B5INH4 Decarboxylase family protein n=1 Tax=Cyanobium s... 55 4e-06 UniRef50_B4R8A8 Conserved predicted Rossmann fold nucleotide-bin... 55 5e-06 UniRef50_C9RJA6 Putative uncharacterized protein n=1 Tax=Fibroba... 54 8e-06 UniRef50_B2KBS7 Putative uncharacterized protein n=1 Tax=Elusimi... 54 8e-06 UniRef50_Q0F1L2 Putative uncharacterized protein n=4 Tax=Bacteri... 54 9e-06 UniRef50_C3XM44 Putative uncharacterized protein n=1 Tax=Helicob... 54 1e-05 UniRef50_B6C594 Possible lysine decarboxylase family n=5 Tax=Bac... 53 2e-05 UniRef50_B8H1X9 3-isopropylmalate dehydrogenase n=10 Tax=Alphapr... 53 2e-05 UniRef50_D2R8B7 Putative uncharacterized protein n=1 Tax=Pirellu... 53 2e-05 UniRef50_A7I2M0 Putative uncharacterized protein n=1 Tax=Campylo... 52 3e-05 UniRef50_A2BXB7 Predicted dehydrogenase n=14 Tax=Cyanobacteria R... 52 3e-05 UniRef50_B4CX49 Putative uncharacterized protein n=1 Tax=Chthoni... 52 3e-05 UniRef50_Q6MA72 Putative uncharacterized protein n=2 Tax=Parachl... 52 3e-05 UniRef50_A4SYK9 Putative uncharacterized protein n=1 Tax=Polynuc... 52 4e-05 UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococ... 52 4e-05 UniRef50_Q46GU3 Cyanobacteria-specific protein n=7 Tax=Cyanobact... 51 5e-05 UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organi... 51 5e-05 UniRef50_C7HXM1 Putative uncharacterized protein n=2 Tax=Proteob... 51 7e-05 UniRef50_Q7NCS7 Gll2901 protein n=1 Tax=Gloeobacter violaceus Re... 51 9e-05 UniRef50_B4D8Z5 Putative uncharacterized protein n=2 Tax=Verruco... 51 9e-05 UniRef50_B0PHI5 Putative uncharacterized protein n=1 Tax=Anaerot... 50 1e-04 UniRef50_C7I5Z6 Putative uncharacterized protein n=1 Tax=Thiomon... 50 1e-04 UniRef50_UPI0001B4E173 Rossmann fold nucleotide-binding protein ... 50 1e-04 UniRef50_Q1LNX6 Putative uncharacterized protein n=1 Tax=Cupriav... 50 1e-04 UniRef50_P74478 Slr1926 protein n=15 Tax=Cyanobacteria RepID=P74... 50 2e-04 UniRef50_Q54UC5 Putative uncharacterized protein n=1 Tax=Dictyos... 50 2e-04 UniRef50_C8P2G7 Decarboxylase family protein n=1 Tax=Erysipeloth... 50 2e-04 UniRef50_C0VRT6 Putative uncharacterized protein n=2 Tax=Coryneb... 50 2e-04 UniRef50_C0YVC1 Rossmann fold nucleotide-binding protein n=4 Tax... 50 2e-04 UniRef50_D2LHD4 Putative uncharacterized protein n=2 Tax=Bacteri... 49 2e-04 UniRef50_Q31PX5 Putative uncharacterized protein n=4 Tax=cellula... 49 3e-04 UniRef50_A8J3N4 Predicted protein n=12 Tax=cellular organisms Re... 49 3e-04 UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardi... 49 3e-04 UniRef50_C9RVN4 Putative uncharacterized protein n=2 Tax=Geobaci... 49 3e-04 UniRef50_Q169F1 Decarboxylase, putative n=15 Tax=Rhodobacterales... 49 3e-04 UniRef50_C5CUJ9 Putative uncharacterized protein n=12 Tax=cellul... 49 4e-04 UniRef50_C9Y9F3 Putative uncharacterized protein n=1 Tax=Curviba... 49 4e-04 UniRef50_Q2N8C1 Decarboxylase family protein n=6 Tax=Sphingomona... 49 4e-04 UniRef50_C2G1A9 Lysine decarboxylase n=3 Tax=Bacteria RepID=C2G1... 48 4e-04 UniRef50_B9DK81 Lysine decarboxlyase family protein n=57 Tax=Sta... 48 4e-04 UniRef50_Q7NK74 Glr1604 protein n=8 Tax=Cyanobacteria RepID=Q7NK... 48 5e-04 UniRef50_D2BNX7 Lysine decarboxylase family protein n=4 Tax=Lact... 48 5e-04 UniRef50_D1NXH0 Decarboxylase family protein n=8 Tax=Bacteria Re... 48 6e-04 UniRef50_P46378 UPF0717 protein ORF6 in fasciation locus n=2 Tax... 48 6e-04 UniRef50_A7ZEK2 Putative uncharacterized protein n=1 Tax=Campylo... 48 6e-04 UniRef50_A9ASP6 Predicted Rossmann fold nucleotide-binding prote... 48 6e-04 UniRef50_A7KVA9 Putative uncharacterized protein ORF097 n=1 Tax=... 48 7e-04 UniRef50_P47044 UPF0717 protein YJL055W n=12 Tax=Saccharomycetal... 48 8e-04 UniRef50_D1PQA8 Putative uncharacterized protein n=1 Tax=Subdoli... 47 0.001 UniRef50_A5Z4Y1 Putative uncharacterized protein n=1 Tax=Eubacte... 47 0.001 UniRef50_O06986 UPF0717 protein yvdD n=96 Tax=Firmicutes RepID=Y... 47 0.001 UniRef50_B3EQJ1 Putative uncharacterized protein n=2 Tax=Chlorob... 47 0.001 UniRef50_B1XPM0 Putative uncharacterized protein n=1 Tax=Synecho... 47 0.001 UniRef50_D1PRT2 Putative uncharacterized protein n=1 Tax=Subdoli... 47 0.001 UniRef50_C3RB76 Putative uncharacterized protein n=5 Tax=Bactero... 47 0.001 UniRef50_Q2NG57 Putative uncharacterized protein n=1 Tax=Methano... 46 0.002 UniRef50_D2TYA6 Lysine decarboxylase n=4 Tax=Enterobacteriaceae ... 46 0.002 UniRef50_A8RVS6 Putative uncharacterized protein n=4 Tax=Firmicu... 46 0.002 UniRef50_Q0KCV4 Predicted Rossmann fold nucleotide-binding prote... 46 0.002 UniRef50_B0KVB7 Putative uncharacterized protein n=1 Tax=uncultu... 46 0.002 UniRef50_Q1D3Q8 Putative molybdenum cofactor carrier protein n=1... 46 0.002 UniRef50_O34359 Uncharacterized SPBc2 prophage-derived protein y... 46 0.002 UniRef50_A8SHQ2 Putative uncharacterized protein n=1 Tax=Faecali... 46 0.002 UniRef50_A7HLI5 Putative uncharacterized protein n=12 Tax=Thermo... 46 0.002 UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oc... 46 0.002 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 46 0.002 UniRef50_Q1PUX4 Putative uncharacterized protein n=1 Tax=Candida... 46 0.002 UniRef50_B3E9F5 Putative uncharacterized protein n=1 Tax=Geobact... 46 0.002 UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteob... 46 0.002 UniRef50_B8PB00 Predicted protein n=2 Tax=Postia placenta Mad-69... 46 0.002 UniRef50_Q8TUS6 ERCC4-like helicase-nuclease n=1 Tax=Methanopyru... 46 0.002 UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 ... 46 0.003 UniRef50_A8VQ13 Peptidase M20 n=1 Tax=Bacillus selenitireducens ... 46 0.003 UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=... 46 0.003 UniRef50_D1AD65 Putative uncharacterized protein n=2 Tax=Actinom... 46 0.003 UniRef50_C0ETT2 Putative uncharacterized protein n=1 Tax=Eubacte... 46 0.003 UniRef50_B2HZN9 Predicted Rossmann fold nucleotide-binding prote... 45 0.003 UniRef50_B8C494 Predicted protein n=1 Tax=Thalassiosira pseudona... 45 0.003 UniRef50_B9M108 Putative uncharacterized protein n=1 Tax=Geobact... 45 0.003 UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=T... 45 0.004 UniRef50_UPI0001C41FEF hypothetical protein mru_1379 n=1 Tax=Met... 45 0.004 UniRef50_B1HS56 Putative uncharacterized protein n=2 Tax=Bacilla... 45 0.004 UniRef50_A0L3X5 Putative uncharacterized protein n=1 Tax=Magneto... 45 0.004 UniRef50_B9L9L9 DapE downstream ORF 2 n=1 Tax=Nautilia profundic... 45 0.004 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 45 0.004 UniRef50_UPI00017437C3 Lysine decarboxylase family protein n=2 T... 45 0.004 UniRef50_Q5ZSL8 Lysine decarboxylase n=4 Tax=Legionella pneumoph... 45 0.004 UniRef50_B9KEW7 Lysine decarboxylase family protein n=18 Tax=Cam... 45 0.004 UniRef50_B2I133 Predicted Rossmann fold nucleotide-binding prote... 45 0.005 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 45 0.005 UniRef50_B6JCC1 3-isopropylmalate dehydrogenase n=1 Tax=Oligotro... 45 0.006 UniRef50_A2U3T9 Possible lysine decarboxylase n=2 Tax=Polaribact... 45 0.006 UniRef50_A8MCE8 Putative uncharacterized protein n=1 Tax=Caldivi... 45 0.006 UniRef50_A3WE77 Predicted Rossmann fold nucleotide-binding prote... 45 0.006 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 45 0.006 UniRef50_C6C1L8 Putative uncharacterized protein n=1 Tax=Desulfo... 45 0.007 UniRef50_C7JH32 Lysine decarboxylase family n=8 Tax=Acetobacter ... 45 0.007 UniRef50_B6KL60 Lysine decarboxylase domain-containing protein n... 44 0.007 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 44 0.007 UniRef50_Q2BJX1 Putative uncharacterized protein n=1 Tax=Neptuni... 44 0.008 UniRef50_Q4QFI0 Putative uncharacterized protein n=6 Tax=Trypano... 44 0.008 UniRef50_A4EUY4 Decarboxylase family protein n=2 Tax=Rhodobacter... 44 0.008 UniRef50_D0T7B3 Nucleotide-binding protein n=2 Tax=Acinetobacter... 44 0.008 UniRef50_Q3AK57 Putative uncharacterized protein n=3 Tax=Synecho... 44 0.008 UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria ... 44 0.008 UniRef50_UPI0001C31E20 hypothetical protein Cwoe_4889 n=1 Tax=Co... 44 0.008 UniRef50_Q1IMD9 Transcriptional regulator, MarR family n=1 Tax=C... 44 0.009 UniRef50_C6B3W9 Putative uncharacterized protein n=3 Tax=Proteob... 44 0.009 UniRef50_A8LF72 Rossmann fold nucleotide-binding protein-like pr... 44 0.009 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 44 0.009 UniRef50_D0CIS5 Putative uncharacterized protein n=1 Tax=Synecho... 44 0.009 UniRef50_A3SXQ1 Decarboxylase family protein n=14 Tax=Alphaprote... 44 0.010 UniRef50_UPI0001B4ADAE hypothetical protein B2_11914 n=1 Tax=Bac... 44 0.011 UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermopr... 44 0.011 UniRef50_C0VNG3 Lysine decarboxylase n=17 Tax=Bacteria RepID=C0V... 44 0.011 UniRef50_A6NU27 Putative uncharacterized protein n=1 Tax=Bactero... 44 0.011 UniRef50_C7PMF6 Putative uncharacterized protein n=1 Tax=Chitino... 43 0.013 UniRef50_D1B924 Glucose-1-phosphate adenylyltransferase n=2 Tax=... 43 0.015 UniRef50_Q01ZQ3 Putative uncharacterized protein n=13 Tax=Bacter... 43 0.015 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 43 0.016 UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglob... 43 0.017 UniRef50_Q3ZX61 Conserved domain protein n=5 Tax=Dehalococcoides... 43 0.018 UniRef50_A8TPK1 Amidase n=1 Tax=alpha proteobacterium BAL199 Rep... 43 0.018 UniRef50_B3L1F5 Lysine decarboxylase, putative n=4 Tax=Plasmodiu... 43 0.018 UniRef50_UPI000190332C filamentation induced by cAMP protein Fic... 43 0.019 UniRef50_B5IAE6 ERCC4 domain protein n=2 Tax=Aciduliprofundum bo... 43 0.019 UniRef50_C3Q9G3 Lysine decarboxylase n=7 Tax=Bacteroidales RepID... 43 0.020 UniRef50_UPI0001C4211A Hef nuclease n=1 Tax=Methanobrevibacter r... 43 0.021 UniRef50_D1QTH1 Putative uncharacterized protein n=1 Tax=Prevote... 43 0.021 UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 43 0.022 UniRef50_Q2S4H5 Lysine decarboxylase-like protein n=1 Tax=Salini... 43 0.022 UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=L... 43 0.022 UniRef50_C1ZCQ8 Putative uncharacterized protein n=1 Tax=Plancto... 43 0.023 UniRef50_Q9YC15 Repair endonuclease XPF n=1 Tax=Aeropyrum pernix... 43 0.023 UniRef50_B9QW65 Putative uncharacterized protein n=2 Tax=Labrenz... 43 0.023 UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillu... 43 0.023 UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator ... 43 0.024 UniRef50_C0CYA4 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.025 UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=A... 43 0.025 UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=F... 43 0.025 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 43 0.026 UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocar... 43 0.026 UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclass... 43 0.026 UniRef50_C1XG50 Predicted Rossmann fold nucleotide-binding prote... 42 0.027 UniRef50_B7G6N1 Predicted protein (Fragment) n=3 Tax=Eukaryota R... 42 0.028 UniRef50_B4VWC6 Putative uncharacterized protein n=1 Tax=Microco... 42 0.030 UniRef50_A4BFX1 Predicted Rossmann fold nucleotide-binding prote... 42 0.031 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 42 0.031 UniRef50_Q3A147 Predicted Rossmann fold nucleotide-binding prote... 42 0.032 UniRef50_C9DGI0 Putative GTP-binding protein n=1 Tax=Deftia phag... 42 0.032 UniRef50_A4WHP9 Putative uncharacterized protein n=2 Tax=Pyrobac... 42 0.033 UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelag... 42 0.033 UniRef50_C3PJ21 Putative uncharacterized protein n=8 Tax=Coryneb... 42 0.035 UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibaci... 42 0.036 UniRef50_B1ZS72 Putative uncharacterized protein n=1 Tax=Opitutu... 42 0.037 UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistace... 42 0.037 UniRef50_B8CW27 Putative uncharacterized protein n=1 Tax=Halothe... 42 0.039 UniRef50_D2NQ58 Predicted transcriptional regulator n=1 Tax=Roth... 42 0.041 UniRef50_B2A5L6 Crossover junction endodeoxyribonuclease ruvC n=... 42 0.042 UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conex... 42 0.043 UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkho... 42 0.043 UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=O... 41 0.047 UniRef50_Q47Q00 Putative uncharacterized protein n=2 Tax=Nocardi... 41 0.049 UniRef50_A7VEK9 Putative uncharacterized protein n=3 Tax=Clostri... 41 0.052 UniRef50_Q139D1 Putative uncharacterized protein n=3 Tax=Rhizobi... 41 0.053 UniRef50_B1N086 Predicted Rossmann fold nucleotide-binding prote... 41 0.053 UniRef50_A7HDK6 Putative uncharacterized protein n=5 Tax=Bacteri... 41 0.053 UniRef50_C0W647 GntR family transcriptional regulator protein n=... 41 0.053 UniRef50_UPI0001B4DEBE hypothetical protein ShygA5_39730 n=1 Tax... 41 0.055 UniRef50_C4NTC6 Putative uncharacterized protein n=2 Tax=unclass... 41 0.055 UniRef50_C6MUI9 Putative uncharacterized protein n=1 Tax=Geobact... 41 0.056 UniRef50_C6VZZ2 Putative uncharacterized protein n=2 Tax=Flexiba... 41 0.057 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 41 0.057 UniRef50_A4YF25 Rossmann fold nucleotide-binding protein-like pr... 41 0.057 UniRef50_D2RIJ2 Putative uncharacterized protein n=1 Tax=Acidami... 41 0.059 UniRef50_Q1AS97 Putative transcriptional regulator n=1 Tax=Rubro... 41 0.060 UniRef50_Q31K69 Putative uncharacterized protein n=3 Tax=Synecho... 41 0.062 UniRef50_C6IIP2 Lysine decarboxylase n=9 Tax=Bacteroides RepID=C... 41 0.067 UniRef50_Q7CRC7 Transcriptional regulator, ArsR family n=4 Tax=A... 41 0.068 UniRef50_B4WC22 IclR helix-turn-helix domain family n=1 Tax=Brev... 41 0.071 UniRef50_A3CUK2 Putative transcriptional regulator n=1 Tax=Metha... 41 0.072 UniRef50_A2SND8 Putative phage protein n=3 Tax=Proteobacteria Re... 41 0.076 UniRef50_D0WJH2 Decarboxylase family protein n=1 Tax=Slackia exi... 41 0.080 UniRef50_Q67KW5 Putative uncharacterized protein n=1 Tax=Symbiob... 41 0.090 UniRef50_C1XZC0 Putative uncharacterized protein n=1 Tax=Meiothe... 41 0.092 UniRef50_A0B6S9 Transcriptional regulator, ArsR family n=1 Tax=M... 41 0.097 >UniRef50_A3DCL8 DNA protecting protein DprA n=3 Tax=Clostridium thermocellum RepID=A3DCL8_CLOTH Length = 370 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 192/371 (51%), Gaps = 11/371 (2%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS- 54 M + + W+ L SI + ++ ++ + + L + + Sbjct: 1 MESNLKEWVWLSSIPGIGAVKSRKLLEHFGDIHNVWSATAAELAVLPFLNRKDILNLTNV 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ +E L + + + +I + E YP L D P L+++G + LAVVG Sbjct: 61 KFKQDVERHLENIHKNDIKVITLEDELYPAYLKNIYDPPLVLYMKGTIQE-EEKYLAVVG 119 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + LA G+T+ SG+ARG+D AH AL+V G +IAVLG GL+ + Sbjct: 120 SRRATSYGLDMAKKISRELAECGITVVSGMARGVDSFAHMGALEVKGRTIAVLGCGLDIV 179 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +++E GA +SE+ P+ NFP RNRIISG+S GV+V+EA RSGSL Sbjct: 180 YPYENKKLMENIIES-GACLSEYLPGTTPVPGNFPARNRIISGISLGVVVIEAGERSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREVFALPG + + S G + LIK+GA +VT ++ILE L Sbjct: 239 ITANFALEQGREVFALPGNVNSIKSTGTNKLIKEGAKIVTGIDDILEELNIYFIEENTKV 298 Query: 295 ENSFYSPDQ---QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + D+ + + +++ + E +D +A + G + V + L+ LEL G + Sbjct: 299 SFNKNLQDERILRGLDNDEKKVVECLKLESMHIDNIARKTGFGIQLVNSILVMLELKGVV 358 Query: 352 AAVPGGYVRLR 362 +PG +L+ Sbjct: 359 EQLPGKIFKLK 369 >UniRef50_Q1PVQ1 Strongly similar to competence protein DprA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVQ1_9BACT Length = 367 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 191/368 (51%), Gaps = 7/368 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M + E LRL + + + + + + G+ + A L Sbjct: 1 MTEFEAILRLHMTKGIGARTYQTLVERFGSIAGVFQAVKPELEKLPGIGGKIANAILEES 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ I + E+ N +IP S YP L D P L+V+G L LA+VGS Sbjct: 61 QRVDIHQEIDLAEKNNIKIIPYTSADYPQHLKNLYDPPLVLYVKGNLLETDLIALAIVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++YG F LA +G I SG+ARGID AHK A+ NG +IAVLG GL T++ Sbjct: 121 RRCTYYGLSQAERFARQLAQKGFCIISGMARGIDTAAHKGAISSNGRTIAVLGCGLGTVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L+ +++ Q GAL+SEFP++ PP NFP RNRIISGLS GVLV+E+ L+SGSL+ Sbjct: 181 PKENTVLSENII-QHGALISEFPINTPPDYRNFPPRNRIISGLSLGVLVIESTLKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ ALEQG+EVFALPG + + S+G + LIK+GA L + +I++ L L A E Sbjct: 240 TAQWALEQGKEVFALPGNVDSLYSQGTNKLIKEGAKLTEDITDIIQELGHVADSLCPAGE 299 Query: 296 NSFYSPDQQ-DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ + + + ++ + + +D + + P V + L+ LE+ + + Sbjct: 300 DAALNDPRDLLLNSHEKKIFSLLSSAPIYIDEIIQSTKLPSSIVSSTLMILEIKKLVKQL 359 Query: 355 PGGYVRLR 362 G Sbjct: 360 SGKRFVKA 367 >UniRef50_P30852 Protein smf n=89 Tax=Enterobacteriaceae RepID=SMF_ECOLI Length = 374 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 374/374 (100%), Positives = 374/374 (100%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI Sbjct: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW Sbjct: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA Sbjct: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA Sbjct: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS Sbjct: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR Sbjct: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRACHVRRTNVFV Sbjct: 361 LRRACHVRRTNVFV 374 >UniRef50_C6C8N1 DNA protecting protein DprA n=20 Tax=Enterobacteriaceae RepID=C6C8N1_DICDC Length = 377 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 216/377 (57%), Positives = 272/377 (72%), Gaps = 3/377 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M DTEIWLR+ SI L +V + + ++ L+ +GL RQ RF++F R+ Sbjct: 1 MTDTEIWLRVASIKGLSAHKVVGLVKRIMRERDSAVDFLRASGLDDRQTARFIAFDRRQS 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + WLE + H + SE YPP L + + P +FV G+ L S Q+AVVGSR +S Sbjct: 61 DDVERWLEDSHCHFVTYGSESYPPLLASISSPPPFIFVRGDDCTLSSAQIAVVGSRDNSN 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA + ITSGLA GIDG+AH+AAL G +IAVLG+GL I+P++HA Sbjct: 121 YGEQWGRFFSRELAANRLIITSGLAVGIDGIAHQAALDAGGKTIAVLGSGLRQIYPKKHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +++E GGA+VSEF L PP+A NFPRRNRIISGL GVLV+EA++RSGSLVTAR A Sbjct: 181 ALADAIVENGGAIVSEFLLKTPPIAANFPRRNRIISGLCLGVLVIEASMRSGSLVTARYA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQ R++FALPGP+GNP +EG HWLI+QGA LVT P+++LE L GL WLPD + Sbjct: 241 LEQNRDIFALPGPVGNPMTEGTHWLIQQGAYLVTHPKDVLEQLHNGLQWLPDISSENDEE 300 Query: 301 ---PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + ++ LPF ++LANVGDEVTPVDVVAERAGQPVPEVV++LL+LELAGWIAAVPGG Sbjct: 301 IICSPEAELELPFADVLANVGDEVTPVDVVAERAGQPVPEVVSKLLDLELAGWIAAVPGG 360 Query: 358 YVRLRRACHVRRTNVFV 374 YVR+RRACHVRRT+V V Sbjct: 361 YVRIRRACHVRRTHVLV 377 >UniRef50_B5FJI1 DNA protecting protein DprA n=42 Tax=Enterobacteriaceae RepID=B5FJI1_SALDC Length = 374 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 271/374 (72%), Positives = 309/374 (82%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM + LYG+ M+ +A+ + +Q I+ LQ+ GLT RQA+RFL P + Sbjct: 1 MARTEIWLRLMYVGDLYGEAMLNMANSLIRQPQINRTHLQEAGLTARQAERFLQLPAGVL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L WLE P +H + ADSE YPPQL A DYPGA+F++G+ LH+ QLAVVGSR+HSW Sbjct: 61 DETLRWLELPQYHFLCADSEIYPPQLRAIDDYPGAIFIDGDPACLHTCQLAVVGSRSHSW 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGRL CE+LA G+TITSGLARGIDGVAH AA+ + G S+AVLGNGL I+PRRHA Sbjct: 121 YGERWGRLLCESLAKSGLTITSGLARGIDGVAHNAAMSMGGKSVAVLGNGLAKIYPRRHA 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +L+ GGA+VSEFPL PPL +FPRRNRIISGLSKGVLV+EAALRSGSLVTARCA Sbjct: 181 VLAENLIATGGAVVSEFPLSTPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPGPIG+PGSEG HWLIKQGA LVT PE+ILENLQ+GLHWLP ENS YS Sbjct: 241 LEQGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYS 300 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +Q + ALPFPELLANVGDEVTPVDVVAERAGQPVP VV QLLELELAGWIAAVPGGYVR Sbjct: 301 LNQDEAALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGWIAAVPGGYVR 360 Query: 361 LRRACHVRRTNVFV 374 LRRA HVRRTNVFV Sbjct: 361 LRRASHVRRTNVFV 374 >UniRef50_Q1K219 DNA processing protein DprA, putative n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K219_DESAC Length = 363 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 130/367 (35%), Positives = 190/367 (51%), Gaps = 12/367 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M E WLRL + L ++++ H AV Q + + L P ++ Sbjct: 1 MTPQEIFWLRLHLTAGLGRQRLIQLIHHYGSAEAALAVSPQHWAEHAQVKSKSLGTPPEA 60 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L+Q N L + YP L +D P L++ G+ LA+VGS Sbjct: 61 QDPTFQKAVTRLDQLNVRLTSLWDDDYPQALRHISDPPALLYLRGQWPE--KRTLALVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S G+RW TL+ +TI SGLARGID AH+ AL+ G +IAVLG G++ I+ Sbjct: 119 RRCSPAGQRWTEKLAHTLSQHNLTIVSGLARGIDSAAHRGALKGPGSTIAVLGCGIDLIY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + L + E+ G +VSE+P P NFP RNRIISGLS+GV+++EAAL+SGSL+ Sbjct: 179 PKENRHLFEQIGEK-GIIVSEYPPGTAPKPGNFPGRNRIISGLSEGVVIIEAALQSGSLI 237 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+VFA+PGP + G LI GA LV +P++IL++ H + Sbjct: 238 TADFALEQGRDVFAVPGPPYDSQVAGCLKLIHDGATLVCQPQDILDHFGLTEHNIAVEEN 297 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 P ++ +L +G +D +A +G EV +L LEL G ++P Sbjct: 298 ----EPTVPPLSNSQDMVLRKLGKTPRHLDKLATESGLTPMEVSAIVLHLELLGLAQSLP 353 Query: 356 GGYVRLR 362 GG+ Sbjct: 354 GGHYIRA 360 >UniRef50_A1ALE0 DNA protecting protein DprA n=8 Tax=Desulfuromonadales RepID=A1ALE0_PELPD Length = 371 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 125/363 (34%), Positives = 179/363 (49%), Gaps = 9/363 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-----TLRQAQRFLSFPR 57 + W+ L S++ + R+ ++ A + + Sbjct: 9 EELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQ 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E LE+ L+ S YP L +D P L+V+G++ H +A+VGSR Sbjct: 69 RQAEEECRRLEKSGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIR-SHEPAIAMVGSRR 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + E LA GV + SG+ARG+D AH+ AL +G +I VLG G++ I+P Sbjct: 128 ATRYGVQATARLAEELARHGVAVISGMARGVDTAAHRGALAGDGRTIGVLGCGIDRIYPP 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + E+ G LVSEFPL PL NFPRRNRIISGL+ GVLVVEAA +SGSL+TA Sbjct: 188 ENRDLFDEMAER-GCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKSGSLITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + ALEQGR+VFA+PG IG G + LIKQGA LV E++LE L + Sbjct: 247 QYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAV--SP 304 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 P + + + +D + + EV + LL LEL G + +PG Sbjct: 305 PPEPRVFALTPREAGVYELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGA 364 Query: 358 YVR 360 + Sbjct: 365 HYA 367 >UniRef50_Q2RJQ0 DNA processing protein DprA, putative n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJQ0_MOOTA Length = 361 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 124/365 (33%), Positives = 183/365 (50%), Gaps = 9/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + W+ L L ++++ + + GL Sbjct: 1 MEEKPFWVALQQTPGLGARRVLQLVKYFGGARAAWEAPEGELLTLEGLGKGAVSLLNWRR 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + E + L +I + E YPP+L D P L+ G F++A+VG+R Sbjct: 61 QVHPEKIMVSLAAAGIGVITIEEEVYPPELKRIYDPPPVLYWRGSRLPGEGFKIAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + LA GV + SGLARGID AH+ A++ G++ +LG G++ ++P Sbjct: 121 RATAYGLKVAEELAAGLAEAGVGVVSGLARGIDAAAHRGAIKGGGLTWGILGCGVDIVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H L ++E GA++SEFP PP A +FP RNRIISGL+ G +VVEAA RSG+L+T Sbjct: 181 REHRELYRQVMEH-GAIISEFPPGTPPDAGHFPARNRIISGLTAGTVVVEAAARSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFA+PGPI + S+GPH LIKQGA LV+ +ILE + W E Sbjct: 240 ADLALEQNRDVFAVPGPITSRYSQGPHDLIKQGAKLVSGVADILEEYEPRSLWSLPREET 299 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++LA + + +DV+ G P E+ T L+ LE+ I +PG Sbjct: 300 RASVT----LNAIEEKVLAVLEATPSHLDVIMAATGLPAGELNTALIMLEMKQLIRRLPG 355 Query: 357 GYVRL 361 G+ Sbjct: 356 GFYVR 360 >UniRef50_B8I3R0 DNA protecting protein DprA n=2 Tax=Clostridium RepID=B8I3R0_CLOCE Length = 374 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 195/373 (52%), Gaps = 13/373 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E W+ L S+ L + + I + + GLT + + L+ Sbjct: 1 MREIEYWIWLTSLEGLSSKKALNLLETYRNPEVIYGLSESELQNTRGLTEKNVKELLNSN 60 Query: 57 R-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + S L + N ++ E YP +L D P AL+ G L SF +AVVGS Sbjct: 61 KRERVGSIYQMLVRYNIKMVNIFEENYPQKLKNIYDPPIALYYRGNLD-SDSFSIAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R LA RGVTI SGLARGID +AHK L G +IAVLG+GL+ I+ Sbjct: 120 RRTTGYGANTARKLSYDLAMRGVTIVSGLARGIDSIAHKGCLDAGGKTIAVLGSGLDNIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L +++ GG +SE+P +PPL +NFP RNRIISG+S GV+V+EAA RSGSL+ Sbjct: 180 PPENAGLFKDIIDSGGLALSEYPPGMPPLQHNFPARNRIISGISGGVVVIEAAKRSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-------H 288 TA CALEQGREVFA+PG I S G + LIK+GA LV ++LE ++ Sbjct: 240 TAGCALEQGREVFAVPGNIDCAYSMGTNQLIKEGAKLVLNATDVLEEFEYNGIQNFTPVQ 299 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 D + Y + ++ ++L + + +D + ER+ + + L LE+ Sbjct: 300 GDIDEKISKKYLNLFKGLSAGEIKILKVIFNGANNIDEILERSNFSAKDASSILFMLEMK 359 Query: 349 GWIAAVPGGYVRL 361 G I PG + Sbjct: 360 GVIKQNPGKLFEV 372 >UniRef50_B8CW40 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B8CW40_HALOH Length = 409 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 193/370 (52%), Gaps = 14/370 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + L L I+ L + + ++ S I ++ G+ + A++ + Sbjct: 31 MPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGIN-KLAEKIVKQR 89 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +K +IE+ L L + N + YP +L + P ++ +G+ + + +A+VGS Sbjct: 90 KKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGK-YDNNERIIAIVGS 148 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R +LA RG I SG ARGID AHK AL+V G +IAVLG GLN I+ Sbjct: 149 RRATRYGCNIARNLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIY 208 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L L+ G L+SE + PLA NFPRRNRIISGL++GV+VVEA+ RSGSL+ Sbjct: 209 PPENKKL-TGLVTDSGYLLSELTPETGPLASNFPRRNRIISGLAEGVIVVEASNRSGSLI 267 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA A +QG+ +F++PG I P S+G + LIK+GA ++T +++L L L + Sbjct: 268 TANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEKPLIKSYN 327 Query: 296 ------NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 S + D ++ ++++ + E ++ + G +V LL LEL G Sbjct: 328 RKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKG 387 Query: 350 WIAAVPGGYV 359 I+ G Sbjct: 388 LISPKQGKKY 397 >UniRef50_A0LER1 DNA protecting protein DprA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LER1_SYNFM Length = 386 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 135/364 (37%), Positives = 182/364 (50%), Gaps = 7/364 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 D WL L + L ++R+ + + ++ GL + Sbjct: 13 DRIAWLALRLVPDLGNRSVLRLINRFGSPRAVLDAEPKELATVEGLRGKAISALQRKEFL 72 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E+ L++ L+ + YP L A D P LFV GEL +AVVGSRA Sbjct: 73 RHPETEWETLQRKGVKLLALNDPEYPSNLSAIPDPPAVLFVRGELQPRDLVAVAVVGSRA 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G + LA GVTI SG A GID AH+ A++ G +IAVLG GL+ +P Sbjct: 133 ASPMGMIFTEKLSGELALNGVTIVSGFAVGIDSAAHRGAIKAGGRTIAVLGCGLDIDYPY 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L + GALV+EFPL PP+A +FP+RNRIISGLS GV+VVEAA RSGSL+TA Sbjct: 193 GQGGLRDEIAAS-GALVTEFPLGTPPVAGHFPQRNRIISGLSLGVVVVEAAHRSGSLITA 251 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-EN 296 R ALEQGREVFA+PG + S GPH L+++GA LV E++LE L+ + P E Sbjct: 252 RLALEQGREVFAVPGMAHHYRSVGPHRLLREGAKLVEGAEDVLEELRPLIRRSAAPPGEP 311 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + L + +D +A PV +V+ L LEL G +PG Sbjct: 312 DERETPVSGLEPDELQALRELDGNPRHIDEIARSTQWPVGKVMAVLSNLELKGVARQLPG 371 Query: 357 GYVR 360 Y Sbjct: 372 KYFV 375 >UniRef50_Q21PU2 DNA processing protein DprA, putative n=2 Tax=Alteromonadales RepID=Q21PU2_SACD2 Length = 399 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 137/375 (36%), Positives = 208/375 (55%), Gaps = 17/375 (4%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----------LTLRQAQRFLS 54 E + + + ++ + L L ++Q+ S Sbjct: 25 EELILFTRLPGVGAATYWQLLDRFPSIHSALQASPEALKPFLSQEALDTLALVRSQKSAS 84 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + ++ + WL++ + L+ D YP L P L+V+G +L+ Q+A+VG Sbjct: 85 MAVQQVQRDMDWLQKNDITLVDTDHTAYPELLREIKRTPPLLYVKGCPASLNFPQVAIVG 144 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G + F LA G TITSGLA GID AH+ A++V G +IAV+G G++++ Sbjct: 145 SRKPTPAGRDTAQAFGSDLAKSGFTITSGLAMGIDAAAHEGAVKVKGRTIAVIGTGIDSV 204 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+R++ LA+ ++ GGA+VSEFPL P NFP+RNRI+SGLS GV+VVEAA++SGSL Sbjct: 205 YPQRNSALASEIIANGGAIVSEFPLGTDPQPQNFPQRNRIVSGLSFGVVVVEAAVKSGSL 264 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---- 290 ++AR AL+Q RE+FA+PG I NP S G H LIK+GA LV ++I++ L L Sbjct: 265 ISARYALQQNRELFAVPGSIHNPLSRGCHALIKEGAKLVETSQDIVDELGGFLSRQRDLL 324 Query: 291 ---PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 ENS D+ ++LA + TP+D +AER +P+ EV++ LL +EL Sbjct: 325 DIYKQPAENSLPKHDELIANDLEDDVLAKLDYSPTPIDALAERTKKPIGEVMSCLLTMEL 384 Query: 348 AGWIAAVPGGYVRLR 362 G +A + GY+RLR Sbjct: 385 KGLVANLGAGYMRLR 399 >UniRef50_C6WT27 DNA protecting protein DprA n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT27_METML Length = 370 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 137/361 (37%), Positives = 195/361 (54%), Gaps = 6/361 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSI 60 + +W+ L SIS + ++ +I A L Q ++ A + + Sbjct: 10 EKSLWVSLGSISGIGPQTFCQLLRAFGSPYNIYAASLSQLKEVVSATIANAISNGANQEP 69 Query: 61 ESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + WL N+HLI YP LL +D P L+ +G L L+ +A+VGSR S Sbjct: 70 AAEFTQWLAGANNHLITLADHEYPRALLEISDPPPYLYAKGNLALLNQPSIAIVGSRNAS 129 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE+ F L G+ I SGLA GIDG AH+ AL+ G +IAV+G GL+ ++P +H Sbjct: 130 VQGEKNAEAFAYDLCQHGLCIVSGLALGIDGAAHRGALKAGGATIAVVGTGLDIVYPAKH 189 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + E G L+SEF L P NFP+RNRIISGLS G LVVEA ++SGS +TAR Sbjct: 190 RELAHQIAEH-GLLLSEFALGTPSKPQNFPKRNRIISGLSLGCLVVEANIQSGSQITARM 248 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A EQGRE+FA+PG I +P S+G H LIKQGA LV ++I E L L + + Sbjct: 249 AAEQGREIFAIPGSIHSPMSKGCHQLIKQGAKLVDCIQDITEEL--KLQPRSNTLISKAS 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + +++A LL +G + P++ + G V EV + L+ LEL G +A++ GG Sbjct: 307 ASQDREIASSEQLLLDTMGFDPAPLERLVTLTGLTVAEVSSMLMLLELDGKVASLTGGQY 366 Query: 360 R 360 + Sbjct: 367 Q 367 >UniRef50_A5EWL6 DNA processing protein DprA n=3 Tax=Proteobacteria RepID=A5EWL6_DICNV Length = 382 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 133/376 (35%), Positives = 192/376 (51%), Gaps = 17/376 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQRFLSFP 56 + W L + + + A ++ + + Q + Sbjct: 4 DELAAWCALWRAPGVGSKTFHNVLATFGSPTLFFASSDREVQQRFSNIAPEKWQPWHRAQ 63 Query: 57 RK-SIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ + L W + ++ + YP L TD P LFV+G++ L + QLAVVG Sbjct: 64 KETDWQQDLTWCAADPNRHILTLEDARYPALLREITDPPPLLFVQGDVDLLSAPQLAVVG 123 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G + + L G+ ITSG+A GIDG AH+AAL V+G ++AV+G GL+ + Sbjct: 124 SRQPTAAGIQNCTQIAQKLVENGLLITSGMALGIDGAAHQAALAVHGKTLAVVGTGLDRV 183 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P RH LA + GA+VSEFP+ A++FPRRNRIISGLS GVLVVEA+++SGSL Sbjct: 184 YPARHRELAHQIAA-NGAIVSEFPVGTGVRAHHFPRRNRIISGLSLGVLVVEASIQSGSL 242 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW----- 289 +TAR A EQGREVFALPG I NP + G H LI++GA LV E+I+E L Sbjct: 243 ITARLAAEQGREVFALPGSIHNPLARGCHQLIREGAKLVESYEDIVEELLPLAKANVELQ 302 Query: 290 ----LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 P+N + + LL +G + VD + E+ E+ LL L Sbjct: 303 QQFQPHHLPQNEPQTHQEYPANSLENRLLNIMGYDPWRVDDLVEKTHLTAAEISAMLLML 362 Query: 346 ELAGWIAAVPGGYVRL 361 EL G +A++ GG + Sbjct: 363 ELDGAVASLSGGRYQR 378 >UniRef50_B0K1T9 DNA protecting protein DprA n=11 Tax=Thermoanaerobacterales RepID=B0K1T9_THEPX Length = 362 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 121/361 (33%), Positives = 189/361 (52%), Gaps = 11/361 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRK 58 + + L ++ + V++ + + + + G + Q + + Sbjct: 4 EKIFKIWLSTVKGIGYKSFVQLMEFFKTAEEVYKAKEIDIFKAIG-NRKLVQNIIEAQKL 62 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + L+ + D E YP +L D P L+++G ++ + +A+VGSR Sbjct: 63 NPFDYIERLQNLKISVYTLDEEEYPKELKNIYDPPPVLYLKGNINLKDNLCIAMVGSRNA 122 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 ++YG++ + L+ RG+T+ SG+ARGID +H AL+ G +IAVLGNG+N ++PR Sbjct: 123 TFYGKQVAQKLAYELSERGITVVSGMARGIDSFSHIGALKERGKTIAVLGNGINIVYPRE 182 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +L + E+ G LVSEFPLD PPL NFP RNRIISGLS GV+VVEA ++SGSL+TA+ Sbjct: 183 NKKLMEQISEK-GLLVSEFPLDAPPLPQNFPLRNRIISGLSLGVVVVEAGIKSGSLLTAQ 241 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFA+PG I + S G + LIKQGA +V E+ILE L + + Sbjct: 242 FALEQGREVFAVPGNITSAYSRGTNELIKQGAKIVIGVEDILEEFN-----LREDVQQKI 296 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + E+ + + ++ +A + +V L L L G I +PG Sbjct: 297 EENLIFPLTEEEKEVYDFICEAPRDIEEIAGYVKIKISKVNAILSSLMLKGMIEKLPGNK 356 Query: 359 V 359 Sbjct: 357 Y 357 >UniRef50_Q3A7H6 Predicted Rossmann-fold nucleotide-binding protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7H6_PELCD Length = 366 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 184/371 (49%), Gaps = 11/371 (2%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSF 55 M E WLRL L ++R+ ++ + A+ + Sbjct: 1 MTPKEQAWLRLHLTPGLGRAGIIRLMEAFGSPEAALIASPREWQKRARIRAAVAEALPAE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSE-FYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +L L Q ++ E YP L D P L++ G L LAVVG Sbjct: 61 NSPLYLQTLEELTQLEVGILSLWDEKRYPALLRTIYDPPALLYIRGTLTE--QPGLAVVG 118 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + + C LA +G+ I SGLARGID AH+ AL G ++AVLG G++ I Sbjct: 119 ARKATVAARQNTHHLCRQLAAQGIAIVSGLARGIDRSAHEGALAAGGHTVAVLGCGIDRI 178 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + +L +L+QGGA++SE+P PPLA +FP RNRIISG+ + VLVVEAA RSGSL Sbjct: 179 YPAENKQLFNDILDQGGAILSEYPPGAPPLARHFPGRNRIISGICRAVLVVEAAQRSGSL 238 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREVFALPGPI NP S G + L+K GA LVTE +IL+ G P Sbjct: 239 ITAEFALEQGREVFALPGPICNPASHGTNQLLKDGAHLVTEAADILQIFMPGRSAPECVP 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + ++ ++ + D VD +A + G EV LL LEL + Sbjct: 299 ADDGMVK---KLSGTALKVYQALQDTPLHVDELARKCGLTPMEVSAILLHLELEDGAIQL 355 Query: 355 PGGYVRLRRAC 365 PG +R+ Sbjct: 356 PGMRFVRKRST 366 >UniRef50_Q2JHL8 DNA protecting protein DprA n=2 Tax=Synechococcus RepID=Q2JHL8_SYNJB Length = 385 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 113/366 (30%), Positives = 172/366 (46%), Gaps = 11/366 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 + WL I + + R+A + G+ AQ +S Sbjct: 26 ERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIVSARPG 85 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E L + + YPP L D P L+ GE +A+VG+RA Sbjct: 86 LDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTRA 145 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG +W + LA G + SGLA GIDG+AH+A L G ++AV+G G++ ++P Sbjct: 146 PTAYGRQWTQKVSAALAEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYPA 205 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H L +L Q GA++SE+P PP +FP+RNRII+GL + LV+EA SG+L+TA Sbjct: 206 HHQALYRRILAQ-GAILSEYPPGTPPAKEHFPQRNRIIAGLCRATLVMEAPETSGALITA 264 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A GREV+ALPG I + G LI+ GA ++ EE+L++L +S Sbjct: 265 HLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLKQPSS 324 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 D Q L G+ + +D +A+ + + + + LL +EL GW+ +PG Sbjct: 325 TGPSDPQQQLLWQLL-----GEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPGM 379 Query: 358 YVRLRR 363 + R Sbjct: 380 RYQRAR 385 >UniRef50_Q2LT39 SMF family protein involved in DNA uptake n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT39_SYNAS Length = 394 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 130/389 (33%), Positives = 187/389 (48%), Gaps = 27/389 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP- 56 + W+ L S++ + + + Q G+ + A R +F Sbjct: 4 DELIYWMALRSVNGIGNLGFRSLMDAFKFPHDVFHASYQDLMSVPGIGPKTASRIKAFHE 63 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +E L L+Q N H+I YP L DYP L+V+G L +A+VGSR Sbjct: 64 WRRLEYDLKKLQQLNIHVITFHDRHYPSLLKTIYDYPPILYVKGMLK-NDDLNIALVGSR 122 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG LA G+T+ SG+ARGID AH+ AL G +IAVLG GL+ ++P Sbjct: 123 TASTYGVFTTERLARELALNGITVVSGMARGIDSAAHRGALAGRGRTIAVLGCGLDIVYP 182 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + GA++SE L PP A NFP RNRIISGLS GV++VEA RSGSL+T Sbjct: 183 PENKNLYEKIAA-DGAVISELALGTPPNAPNFPLRNRIISGLSLGVVIVEANERSGSLIT 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQGREVFA+PG I + GS G H LIK+GA L+ +ILE + + + Sbjct: 242 ARIALEQGREVFAVPGNIDSHGSRGSHKLIKEGAKLIENVGDILEEIIPQIERRRENNLL 301 Query: 297 SFYSPDQ--------------------QDVALPFPELLANVGDEVTPVDVVAERAGQPVP 336 + + + + + D+ +D++ E++G + Sbjct: 302 NEQEKNTETSEKKVSCETRSCSAASIFPSFSENEALIFNLLTDKPVDIDLIIEKSGLNIN 361 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLRRAC 365 E + LL LEL I +PG + + Sbjct: 362 ETLNCLLNLELYEAILQLPGKLYKRKEQS 390 >UniRef50_A6C3Y5 DNA processing chain A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3Y5_9PLAN Length = 376 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 185/364 (50%), Gaps = 6/364 (1%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRK 58 ++L I + + + I Q+ G+ + A + + Sbjct: 12 LLELIQLNLIRGVGPRIRRTLLDQFGSPAQILNAPRQELLNVQGIGTKLADAIIYREAKS 71 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E L + ++ +S YP L D P L+ +G L +A+VGSR Sbjct: 72 TAEDELRRCRASGYQILFEESAEYPSLLREMPDPPSLLYCKGSLLPQDELAVAIVGSRKC 131 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + LA G+T+ SGLARGID AH AL+ G +IAV+ GL I+P Sbjct: 132 THYGLQQAEKIAAALARAGITVVSGLARGIDQAAHTGALKAGGRTIAVMATGLAHIYPPE 191 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L+ ++ Q GA+V+EFPLD P+A FP+RNRIISG S GV+++EA +SG+L TAR Sbjct: 192 HRELSEAVALQ-GAIVTEFPLDQAPVAGLFPQRNRIISGFSMGVVLIEAGRKSGALHTAR 250 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A EQGREVFA+PG I +P S G H LI+ GA+LV + E+ILE L + A Sbjct: 251 HAYEQGREVFAVPGRIDHPASAGCHDLIRDGAMLVRDVEDILEGLGPAKTPVMTAKNREV 310 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 ++P + ++ ++L V E ++ + + + +++ L LE+ + +PGGY Sbjct: 311 HTPRELSLSEFERDILNLVTLEPQHLNEIVQSSNLDSSRILSTLTILEMRKVVKRLPGGY 370 Query: 359 VRLR 362 + Sbjct: 371 LVRA 374 >UniRef50_A9B0F9 DNA protecting protein DprA n=4 Tax=Chloroflexi RepID=A9B0F9_HERA2 Length = 369 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPR 57 M + ++ + + + + + + GL R Q + Sbjct: 1 MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +E+ L + + N ++ +P L P L++ G L + +A+VG+R Sbjct: 61 HLDLEAELRTIAEQNIKVVLQTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG F LA G+T+ SGLA GID +AH+ AL NG ++AVLG+GL I+P Sbjct: 121 NPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTALDNNGRTLAVLGSGLQQIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H +LAA + Q GAL+SE+ PL+ NFP RNR+ISGLS +VVEA RSG+L+T Sbjct: 181 SQHRQLAAD-VSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQGR+VFA+PG I + S+GP+ LI GA + E++LE L + Sbjct: 240 ARFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNL------HQAQA 293 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 LL ++ + T +D + G ++ L +EL G + V G Sbjct: 294 QQTVSTIVPETPAEALLLPHLSGQPTHIDELGRSCGLAAHDLAATLGLMELKGMVRHVGG 353 Query: 357 GYVRLRRAC 365 + L R Sbjct: 354 MHYVLARET 362 >UniRef50_Q1ILA8 DNA processing protein DprA, putative n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILA8_ACIBL Length = 385 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 182/374 (48%), Gaps = 14/374 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LSFPR 57 WL L L R+ I L + GL AQ L Sbjct: 10 NRQRQWLALSLTPQLGPTRGRRLVEHFGDVERIFRASLTELEASGLPAASAQSIALGKSY 69 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E + Q ++ YPP+L+ D P AL V G++ L +AVVG+R Sbjct: 70 ELAEDEMVKTAQAGAKIVAIGDPEYPPRLMEIYDPPLALRVRGDVSILSKPGMAVVGTRH 129 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA RGV I SGLARG+D AH+ + G ++AV G G++ I+PR Sbjct: 130 PTPYGLGMAERLSCDLAARGVIILSGLARGVDTAAHRGTINARGKTVAVFGTGVDEIYPR 189 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++E GGAL+SEFP P NFP RNRIISGLS GVLV+EA SG+ +TA Sbjct: 190 ANKKLAEQIVEFGGALISEFPTGTFPAPQNFPIRNRIISGLSVGVLVIEAGEYSGTRITA 249 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-------FGLHWL 290 RCALEQ REVFA+PG + N S GP+ LIKQGA LV E++ E L L Sbjct: 250 RCALEQCREVFAVPGNVTNKLSWGPNTLIKQGAKLVATWEDVWEELGSDIRLQIPPPEAL 309 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAG--QPVPEVVTQLLELEL 347 + DQ ++ ++ A + DE +D + E+ E+ + L ELE+ Sbjct: 310 ATETPQAASLFDQHEMPAQERKVYALLRADESMHIDELIEKLDGRLSSAEIFSALFELEM 369 Query: 348 AGWIAAVPGGYVRL 361 A I +PG Y Sbjct: 370 ASKIRQMPGKYYVR 383 >UniRef50_B8FRH4 DNA protecting protein DprA n=2 Tax=Desulfitobacterium hafniense RepID=B8FRH4_DESHD Length = 389 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 124/375 (33%), Positives = 188/375 (50%), Gaps = 12/375 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF--PRKS 59 + + + +I + + + + Q+ ++ + Sbjct: 16 EEKLMRAMIHTIRGVGNSRLRHLIARYGSAVNALQPSKGSQHSPEEHWQQLIAQKCQEIN 75 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 L L+ LI + E YP L D P L+ +G L LA+VG+R + Sbjct: 76 PGEVLEALQSQGIKLIIPEEEGYPDLLRQLPDAPPLLYYKGALPV-RQECLAIVGARKAT 134 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + +A +G+ + SGLARGID AH+ AL G++ AV+G GLN ++P + Sbjct: 135 PYGRAAAEALAKDIAGQGIVVVSGLARGIDAAAHRGALAGKGITWAVMGCGLNHMYPPEN 194 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +LA +L +GGAL SEFP +PP FP RNR+ISG+S+GV+VVEAAL+SG+L+T Sbjct: 195 QKLAEEILAKGGALWSEFPPGMPPEPQFFPARNRLISGMSRGVVVVEAALKSGALITVDF 254 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI---------LENLQFGLHWL 290 ALEQGREVFA+PGPI + S+GPH LI+QGA LV E+I +++L Sbjct: 255 ALEQGREVFAVPGPIFSQMSKGPHHLIRQGAKLVESFEDIWVEIPAFAGVDHLSPPSPDR 314 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 S ++ ++ ++L + D T +D + + P ++ LLEL+LAG Sbjct: 315 GTESVESGKQEGKRGISSEQQQILNQLSDVPTHIDQITMNSEVPPEQIPLALLELQLAGR 374 Query: 351 IAAVPGGYVRLRRAC 365 I +PG L C Sbjct: 375 IEQLPGQLYVLAYKC 389 >UniRef50_A8PP37 Protein smf (DNA-processing chain A) n=1 Tax=Rickettsiella grylli RepID=A8PP37_9COXI Length = 384 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 139/378 (36%), Positives = 194/378 (51%), Gaps = 19/378 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 + WL L +I + + I + + G+ A + + Sbjct: 6 DEIGYWLALYTIPQCGIHTALLLLKKFKTPKEILSASYDELIQAGIRPTLASHLKNPDWE 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 +E L WLEQP + + + YP L D P LF++GE+ L LA+VG+R+ Sbjct: 66 RVELGLHWLEQPQNSIFHWGHDAYPSLLNEIADPPLILFMKGEVSILQRQMLAIVGARSP 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + G L +G I SGLA+GIDG AH+ AL +IAVLG+G+ I+P Sbjct: 126 TPTGREIAYQLANELTEQGFVIISGLAKGIDGAAHQGALFDKAATIAVLGSGIECIYPSC 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++E+GG L+SEF + P A FPRRNRIISGLS GV+VVEA+LRSGSL+TAR Sbjct: 186 HRALANEIVEKGGLLISEFFPNTSPKANYFPRRNRIISGLSLGVIVVEASLRSGSLITAR 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG------------ 286 AL QGREVFA+PG I + S+G H L+K GA LV E+I+++L F Sbjct: 246 YALNQGREVFAIPGSIRSLLSQGCHALLKDGATLVENCEDIIQSLSFLPQCVLSSDKDNV 305 Query: 287 ----LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 H + + + +L+ +G E T +D V R P+ V+ +L Sbjct: 306 GVKGGHNKIPRSPLTPQKNQRSSLDSQDKKLVECLGFETTSIDSVLARTKLPITTVLDRL 365 Query: 343 LELELAGWIAAVPGGYVR 360 L+L G+I VPGGYVR Sbjct: 366 SILQLQGYIDKVPGGYVR 383 >UniRef50_Q3Z8J0 DNA processing protein DprA, putative n=5 Tax=Dehalococcoides RepID=Q3Z8J0_DEHE1 Length = 406 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 185/370 (50%), Gaps = 13/370 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF-LS 54 M + + + I+ + + + + + GL A+ S Sbjct: 34 MQNQDCKYAIGFSYINGVGRVRLNLLESYFGNLESAWHAGKEALVSAGLDNSLAENIVAS 93 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 P+ + +L L++ + + YP +L DYP +FV+G+L L +VG Sbjct: 94 RPKIDLPKTLETLKRHDIQVFTHTDSDYPARLKQIHDYPPLIFVKGQLLGNDELCLGIVG 153 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG+ E+LA G+TI SGLARGID VAH AAL+ G SIAV G GL+ I Sbjct: 154 TRQPTVYGKLTTEELAESLARSGLTIVSGLARGIDTVAHTAALKAGGRSIAVFGCGLDII 213 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P ++ LA + E GALVSE P + P FPRRNRI+SGL +G+LV EA SG++ Sbjct: 214 YPSENSCLARQIAE-NGALVSEHPPGIRPRPEFFPRRNRILSGLCRGILVTEAGENSGAV 272 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQ RE+FA+PG I + S G + LI++GA LV +++LE L GL +PD Sbjct: 273 ITANFALEQNREIFAVPGSILSAASVGTNRLIQEGAKLVCSAKDVLEELNIGLLSVPDNT 332 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + +L +G E +D + G + V + L +EL G + + Sbjct: 333 TKAVPENQTESL------ILDKLGYEPIHIDQLCRECGLGIALVSSTLAIMELRGQVRSA 386 Query: 355 PGGYVRLRRA 364 G R Sbjct: 387 GGMNYVRTRE 396 >UniRef50_C4L7Y6 DNA protecting protein DprA n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7Y6_TOLAT Length = 374 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 148/363 (40%), Positives = 206/363 (56%), Gaps = 1/363 (0%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WL L +I + ++ + + L G +Q +R+ F ++ + Sbjct: 13 NELALWLHLTNIPGIGPVKGAKLLQQFP-ITALSQSQLSDCGWNQQQIERWFDFSPETYK 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + W ++ + +++ D YP L P LFV G+L L+ QLAVVGSR + Sbjct: 72 PIIDWADETSRYILHFDHPSYPALLRNVVGAPLVLFVAGDLAVLNQQQLAVVGSRRPTQD 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + F L +G ITSGLA GID V+H+ ALQ G +IAV G GL ++P +H R Sbjct: 132 GRDAAQSFTSELVRQGFAITSGLASGIDAVSHQTALQQGGRTIAVQGCGLRHVYPAKHKR 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA+ +LEQGGAL+SEF + P A FPRRNRIISGL+ G LV+EAA +SGSL+TARCAL Sbjct: 192 LASQILEQGGALISEFFPETLPRAEYFPRRNRIISGLTVGTLVIEAAEKSGSLITARCAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQ REVFA+PG N + G H LI+QGA LV + +I+E + + E + Sbjct: 252 EQNREVFAVPGRSNNLNARGCHRLIQQGAKLVCDVADIIEEIGIFPRMVEHYGETGPIAE 311 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + L DEVT +DV+A + PV EV+T+L+ LEL G I +VPGGYVR Sbjct: 312 EPLSDLPFYRLLDNVRSDEVTSIDVIAATSRLPVQEVMTELITLELEGLILSVPGGYVRT 371 Query: 362 RRA 364 R A Sbjct: 372 RSA 374 >UniRef50_Q2S3B9 DNA processing protein DprA n=2 Tax=Rhodothermaceae RepID=Q2S3B9_SALRD Length = 388 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 120/370 (32%), Positives = 179/370 (48%), Gaps = 12/370 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 D + L +S + + + + I G+ + A+ L+F + Sbjct: 19 DQRALIGLSLVSGVGPQRLRALLAAFETPTAIFRASRSTLTQVDGVGDQTAEAILTFDDR 78 Query: 59 SI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + L+ +P +L D P L++ G L + VVG+R Sbjct: 79 AAVRREMERADDLGASLVSPWDARFPDRLREIYDPPAFLWMRGTLPEDARPMVTVVGTRR 138 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F LA RG T+ SGLA GID AHK AL G ++AVLG+G+ I+P+ Sbjct: 139 CTDYGRTQAHHFGAELARRGFTVVSGLAYGIDAAAHKGALDAGGRTVAVLGSGVGHIYPK 198 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + E GA++SE+ LD P A +FP RNRI+SGL+ G LVVE+ G+L+TA Sbjct: 199 KHTALAERIAEH-GAVLSEYGLDAEPDAPHFPERNRILSGLALGTLVVESYAEGGALITA 257 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPEN 296 R ALEQ REVFA+PG I S G + LI+ G A LV E +++LE L + PD + Sbjct: 258 RLALEQNREVFAVPGAITKDSSRGTNRLIQNGHAKLVMEVDDLLEELPAVVVDDPDTVDA 317 Query: 297 SFYS-----PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S ++++ L + + +D + E G E + LLELE GW+ Sbjct: 318 ETVSSGAGRDPTEELSGEAERLYDALSETPVHIDALCEETGLSPSEALPTLLELEFQGWV 377 Query: 352 AAVPGGYVRL 361 + G R Sbjct: 378 RQLAGKQFRR 387 >UniRef50_A7K4Z8 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=15 Tax=Vibrionaceae RepID=A7K4Z8_VIBSE Length = 369 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 170/366 (46%), Positives = 217/366 (59%), Gaps = 8/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 D WL+L + + G M ++ +I +Q GLT +Q Q + S ++ Sbjct: 7 DDLAAWLKLSCLPGIGGVKMNKLLAR-DTPRNIVNFSPEQLQQLGLTTKQIQAWASTDKE 65 Query: 59 SIESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +++ L WLE NHH++ YPPQL P LFV+G L Q+A+VGSR Sbjct: 66 -VDACLSWLEASTNHHILTLTDPLYPPQLKQIVAPPPLLFVQGNSTCLSQPQIAMVGSRN 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G + R F +TSGLA GIDG AH ALQ G +IAVLG+GL I+P Sbjct: 125 ASIDGLQHARHFAAEFVQHDFIVTSGLALGIDGHAHDGALQAKGKTIAVLGSGLENIYPA 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA ++E GALVSEF + P NFPRRNRIISGLS GVLVVEAA RSGSL+TA Sbjct: 185 RHRGLAQRVIEH-GALVSEFRPNAKPRPENFPRRNRIISGLSLGVLVVEAAERSGSLITA 243 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R ALEQGREVFALP I P + G + LI+ GA LV + +++L+ +Q L W + Sbjct: 244 RYALEQGREVFALPASINAPNASGGNQLIRHGACLVEKTKDVLDEIQSLLDWSINQST-D 302 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +S + LPFP+LLANVG E TPVD++A R PV EV+ QLLELEL+G + AV GG Sbjct: 303 LFSTLNDEEELPFPQLLANVGSEATPVDILANRTNIPVQEVMMQLLELELSGHVVAVSGG 362 Query: 358 YVRLRR 363 Y+R R Sbjct: 363 YIRKGR 368 >UniRef50_B5YKX6 DNA processing protein DprA n=7 Tax=Bacteria RepID=B5YKX6_THEYD Length = 368 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 133/365 (36%), Positives = 194/365 (53%), Gaps = 6/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 + L L I + + R+ I + + G+ + +A+R +F + Sbjct: 4 EEIRYCLALNEIKDIGPVLLKRLFSRFGLAKQIFNATIDELAYVEGIGIEKAKRIKNFDK 63 Query: 58 KS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + IE + E + + E YP L D P LF GEL + + L++VGSR Sbjct: 64 WNVIEKLIKLCENRDIAIYSFSDEKYPKLLREIYDPPVVLFCRGELISENDAALSIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R LA G+TI SGLARGID VAH + L G +IA+LG+G++ I+P Sbjct: 124 RLSEYGRRITERLAYDLACLGITIVSGLARGIDSVAHNSTLSAGGRTIAILGSGVSCIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + LA ++ + GA++SEF D P NFPRRNRIISGLS G LV EA + SG+L+T Sbjct: 184 PENKMLAEKII-KNGAIISEFYPDEGPRKENFPRRNRIISGLSFGTLVTEATINSGALIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGREVFA+PG I + SEG ++LI++GA LVT+ E+ILE ++ + L Sbjct: 243 ASFALEQGREVFAVPGNITSKNSEGTNYLIQKGAKLVTKVEDILEEIEQFIPLLKKITTE 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + D +++ N+ +E +D + + G +V+ LL LE+ G I + G Sbjct: 303 LSNETTKTDRLDNDEKIVFNILNEPLYLDEIILKTGMNTAKVLEILLSLEIDGLINKIEG 362 Query: 357 GYVRL 361 YVR Sbjct: 363 KYVRR 367 >UniRef50_D1CDL9 DNA protecting protein DprA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDL9_THET1 Length = 365 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 179/364 (49%), Gaps = 12/364 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK- 58 D W+ I S+ + ++ L+ + + L + Sbjct: 9 DLPYWIAFSRIPSIGPARIRKLLAHFGGLQRAWEANALELKAAEMDDKSIGIILKARKSI 68 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + L LE DS YP L + P ++V+G++ +AVVG+R Sbjct: 69 NPHLELEKLESRGIKPYAYDSPGYPRLLSYVPNPPVVIYVQGDIVQEDECSVAVVGTRKA 128 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG L GVT+ SGLARGID AH+AAL+ G +IAVLG+GL+ ++P Sbjct: 129 TAYGREVVSRIVTGLVMNGVTVVSGLARGIDSYAHRAALEAGGRTIAVLGSGLDQVYPWE 188 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +LA ++ + GALVSE+PL P A NFP RNRII+GLS V+V+EA ++SG+L++A Sbjct: 189 NKKLADDIV-RSGALVSEYPLGTRPEARNFPPRNRIITGLSLAVVVIEADMKSGALISAG 247 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A +QGREV A+PG I +P S G ++LI+QGA LV+ E+ILE L L Sbjct: 248 FAAQQGREVMAVPGSILSPTSAGTNYLIQQGAKLVSRVEDILEELDIDRVSLE------S 301 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 S LL +G E +D +A + P+ V L +E+ G + G + Sbjct: 302 NSRSIVTDDPTEQALLDVLGTEPKHIDDIAFESNMPIAVVSATLTMMEIKGIV-RSNGMF 360 Query: 359 VRLR 362 L Sbjct: 361 YSLA 364 >UniRef50_B0TH91 DNA processing protein dpra, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH91_HELMI Length = 378 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 190/371 (51%), Gaps = 13/371 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 + + W+ L ++ + + + ++ GL+ + +R L R+ Sbjct: 9 ERDSWIALSALPGIGPRRFYALLGHFGTARNAWLAADERWDGVAGLSRQGWERTLQARRR 68 Query: 59 --SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L L Q + + E YP L + D P L+V G+L A A+VG+R Sbjct: 69 ADRVTVLLRRLTQGDIAAVLLIDEQYPALLRSIPDPPPVLYVRGKLTAEDESAFAIVGTR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + LA G T+ SG+ARGIDG+AH++AL+ G +IAVL G++ I+P Sbjct: 129 KPSAYGVKACAAIARDLAQHGRTVVSGMARGIDGIAHQSALEAGGRTIAVLAGGVDVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +LA+ ++EQ GALVSE+P P FP RNRIISGLS GV+VVEA +SG+L+T Sbjct: 189 PEHGKLASRIVEQ-GALVSEYPPGKRPEPGTFPVRNRIISGLSNGVIVVEAGEKSGALIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ-----FGLHWLP 291 A ALEQGR+VFA+PGPI P S G + LI+QGA LV E+IL+ +Q Sbjct: 248 ADQALEQGRDVFAVPGPITLPQSIGTNRLIQQGAKLVITVEDILDEVQRQLTLPLSAPAH 307 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + E + D + +L + E D +A R G EV L LEL G + Sbjct: 308 SSDEQLSENRLSSDQSEAERRILEILDWEPRSADELAARLGLSGSEVAAALTLLELKGRV 367 Query: 352 A-AVPGGYVRL 361 GG+V + Sbjct: 368 QMERGGGFVAV 378 >UniRef50_C9Y1Y8 Protein smf n=7 Tax=Enterobacteriaceae RepID=C9Y1Y8_CROTZ Length = 381 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 239/374 (63%), Positives = 280/374 (74%), Gaps = 4/374 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M TEIWLRLM++ SL G+ MVR + A L+ GL ++Q F +P+ + Sbjct: 12 MSPTEIWLRLMAVYSLSGEIMVRAFQRLQNMPGDPAEALRLAGLNIKQRALFFGYPQAKL 71 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E++L WLE P HHL+ A S YP L A +PGAL V G+ AL QLAVVGSR HSW Sbjct: 72 EAALRWLEMPGHHLLTARSAHYPVSLRAIEWFPGALLVAGDPRALTRPQLAVVGSRHHSW 131 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WG FC LA G+T+TSGLA GID +AH++AL+ G +IAVLGNGL ++P RH Sbjct: 132 YGEQWGSKFCYALAESGLTLTSGLALGIDAIAHRSALKAQGKTIAVLGNGLAQVYPARHR 191 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +LA ++EQGGA+VSEFP + P +FPRRNRIISGLS GVLVVEAALRSGSLVTARCA Sbjct: 192 KLAEEIIEQGGAVVSEFPFEAQPRPAHFPRRNRIISGLSVGVLVVEAALRSGSLVTARCA 251 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQGREVFALPGP+GNPG EGPHWLI+QGAI VT P++I++ LQ L WL S Sbjct: 252 VEQGREVFALPGPVGNPGCEGPHWLIQQGAIAVTHPQDIIDYLQNELPWLKTVNY----S 307 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 PDQ++ ALPFPELLANVGDEVTPVDVVAERAGQPVP V QLLELELAGWIAAVPGGYVR Sbjct: 308 PDQEEGALPFPELLANVGDEVTPVDVVAERAGQPVPLTVAQLLELELAGWIAAVPGGYVR 367 Query: 361 LRRACHVRRTNVFV 374 +RRA HVRRTNVFV Sbjct: 368 VRRAGHVRRTNVFV 381 >UniRef50_A8MHD0 DNA protecting protein DprA n=2 Tax=Alkaliphilus RepID=A8MHD0_ALKOO Length = 365 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 101/369 (27%), Positives = 184/369 (49%), Gaps = 12/369 (3%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRF-L 53 M + I + L I + D+ ++ + + G ++ Sbjct: 1 MELKERNILIWLSHIEGISNKDIEKLIKYFNTLDELWTADVRHIKNALGNRGIIIEKIIK 60 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + R+ +++ + E YP +L D P ++++G L+ +A+V Sbjct: 61 NRNREFFSKVFKNIDKYVIECLTIYDENYPEKLRNIYDPPYVIYMKGNKEYLNIPLIAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG+ F + LA G+ SGLA GID +HK AL G ++ VLG GL+ Sbjct: 121 GARKCTAYGKWAAYQFSKELAQWGIGTISGLALGIDTNSHKGALDGTGNTVGVLGCGLDQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + RL ++++E G ++SE+PL +PPL ++FP RNRIIS LS GV+V+EA+ +SG+ Sbjct: 181 CYPASNERLMSTMIE-NGCVLSEYPLGMPPLKHHFPARNRIISALSDGVIVIEASEKSGA 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+T AL+QG++++ALPG I + S+G + LI+ GA ++ + E+++E+L++ Sbjct: 240 LITVEYALDQGKDIYALPGNINSLQSKGTNRLIRDGAKILLDIEDVIESLKYRYSISKKQ 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E S ++++ + + +D++ E+ L LE+ G+I Sbjct: 300 IEKSTQ----EELSPLEKRVYEIIRRNPIHIDLLYNETRLHPWELNPILTILEIKGYIIQ 355 Query: 354 VPGGYVRLR 362 + G + Sbjct: 356 ISGKTFTVP 364 >UniRef50_A5IAY0 DNA processing enzyme DprA (SMF family) n=6 Tax=Legionella RepID=A5IAY0_LEGPC Length = 361 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 145/364 (39%), Positives = 206/364 (56%), Gaps = 12/364 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M + + L L + + ++++ + + + L++ GL AQ +F Sbjct: 1 MNNLQPLLALNRMKKIGPRTVLKLQKRWPDLNLMFQLSSVDLEEAGLPSWLAQTIKNFDP 60 Query: 58 KSIESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I++ L WL NHH++ DS +YP L D P L+ +GEL AL LA+VGSR Sbjct: 61 DFIKTDLDWLSSSENHHILTWDSPYYPALLKEIADPPFILYAKGELSALTQPNLAIVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R F ++ GV+I SGLA GID AH L+ G +IAVLG G++ I+P Sbjct: 121 NASVTGNENARAFSREISRHGVSIVSGLALGIDAHAHLGCLEGGGKTIAVLGTGIDCIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RRH +LA + E G L+SEFPL PP+A +FP RNRIISGLS +LV+EAA++SGSL+T Sbjct: 181 RRHLKLAEQITE-NGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ R+V A+PG I NP + G H+L++QGA LVT ++L+ L Sbjct: 240 ARMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLDEL-------KIEHHQ 292 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + +A L+ +G E T +D + R+G + +V + L ELEL G + AVPG Sbjct: 293 FASNKPIFSLASGKENLVKFIGFETTTIDQIIGRSGYSMEQVTSGLAELELKGAVMAVPG 352 Query: 357 GYVR 360 GY+R Sbjct: 353 GYIR 356 >UniRef50_B1I254 DNA protecting protein DprA n=3 Tax=Peptococcaceae RepID=B1I254_DESAP Length = 394 Score = 365 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 117/363 (32%), Positives = 173/363 (47%), Gaps = 8/363 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 + WL + G ++ + V + GL A LS + Sbjct: 25 EERAYWLAWVVAWPAGGRRLLNLLEAVGSARQAWEAEKSELAASGLDSSLADELLSRRSR 84 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 + + Q +I YP L D P LF G S +A+VGSR Sbjct: 85 VDPAAEQERVRQAGIRVITWVDADYPESLRHIYDPPAVLFGLGAFSFQESGPAVAIVGSR 144 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L + G+ + SG+ARGID AH+ AL+ ++AVLG+GL+ ++P Sbjct: 145 RATPYGKATAGRLAAALGSCGLVVVSGMARGIDTAAHRGALESGAPTVAVLGSGLDVVYP 204 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R +A L + GG +++EFPL P A++FP RNRIISGL +GV+VVEA RSG+L+T Sbjct: 205 RENAGLMEKIAASGGLVLTEFPLGSKPEAWHFPVRNRIISGLCRGVVVVEAGERSGALIT 264 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+V A+PG + NP S GP+ LIKQGA LV + +++LE L Sbjct: 265 AELALEQGRDVMAVPGNVNNPFSRGPNRLIKQGARLVEDAKDVLEELGL---TALFPETE 321 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 S + ++ +L + + + G P+ L LE+ G++ PG Sbjct: 322 SGEAEAVAQLSGEEKRVLEILQGQSLSDQALIRLTGLAAPQTAAVLAYLEIKGFVRRAPG 381 Query: 357 GYV 359 G Sbjct: 382 GLY 384 >UniRef50_C0GIT4 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIT4_9FIRM Length = 357 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 179/365 (49%), Gaps = 13/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M D W+ L +S+L ++R+ + L GL ++ A+ Sbjct: 1 MRDLPFWVALSKVSTLGARRILRLIAYFGTAEKAFLASMDDLLAAGLPVKAARALCDERE 60 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + ++ YP L D P L+ G++ L + +A+VGSR Sbjct: 61 GLDPHRVAEEVHGSGFGVLTLACAGYPLLLAEIYDPPAVLYYRGDIDVLSTPCVAMVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G+T+ SG+ARGID AH AL G +IAVLG G + +P Sbjct: 121 KATEYGKNAALKLAGQLAAAGITVVSGMARGIDTWAHAGALGAGGPTIAVLGCGPDVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +L ++ GG ++SEFP P +FP RNRIISGLS+ +VVEAA +SG+L+T Sbjct: 181 PENLKLREKIV-SGGIILSEFPPGTQPKPGHFPLRNRIISGLSRATVVVEAAEKSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A CALE GREVFA+PG + +P S G H L+K+GA + + +IL L E Sbjct: 240 ADCALEHGREVFAVPGNVNSPYSRGCHRLLKEGAAMAEKAADILAALG--------MSEQ 291 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ +L + E D +A+R G P P++ L+ELELAG + +PG Sbjct: 292 ETAATKAVQLSDTQASVLETLQYEPAHFDEIADRCGLPAPQLAATLVELELAGLLRKLPG 351 Query: 357 GYVRL 361 + Sbjct: 352 NFFLR 356 >UniRef50_A7BSD4 DNA processing chain A n=2 Tax=Beggiatoa sp. PS RepID=A7BSD4_9GAMM Length = 420 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 133/410 (32%), Positives = 189/410 (46%), Gaps = 52/410 (12%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKS 59 + E WL L+ + + VR+ + + + + Sbjct: 7 EEEYWLALLRAPGVGPVNFVRLIKNFESPRGVFEAGYGQWLSFNMKEPLLKYLQYPDWTA 66 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 IE + WL QPNH+L+ DS YP +L + P LFV G++ L S Q+A+VG+R S Sbjct: 67 IEKDMQWLIQPNHYLLTIDSPEYPSRLREINNPPPVLFVHGDIALLSSQQIAMVGTRKPS 126 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G + + F E L+ +G TITSG+A GID ++H AL +G +IAV G GL+ ++P +H Sbjct: 127 PEGAQTAKEFAEYLSFQGFTITSGMAYGIDAISHWGALACSGKTIAVAGTGLDRVYPAKH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA + E GAL+SE PL P FP R+RI+SGLS G LV+EA +SG+L TAR Sbjct: 187 HELAHKIAET-GALISELPLGTPVHRSQFPIRSRIVSGLSLGTLVIEAPEKSGALYTARH 245 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A Q REVFA+PG I NP +G H LIK+GA LV +I E L+ H E+ Sbjct: 246 ATNQRREVFAIPGSIYNPLVKGCHQLIKEGAKLVETVADIFEELRPIHHHSVSQTESETK 305 Query: 300 SP------------------------------------------------DQQDVALPFP 311 D D+ + Sbjct: 306 VRVSFPITSTKLTTIEQTDSSNNITIIDKIDSFAIPNEKMAPGNLIKTKNDLSDLEPDYI 365 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 LL + T +D + E++G ++ + LL LEL G +A GG Sbjct: 366 RLLGYLEAGPTSIDNLVEQSGLTAGDISSMLLILELRGLVATQSGGLYTR 415 >UniRef50_C7LWA7 DNA protecting protein DprA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWA7_DESBD Length = 367 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 165/367 (44%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGL--TLRQAQRFLSFP 56 M + L L S L R+ D+ GL QA+ Sbjct: 1 MDEFSASLALRHTSGLGPRTWKRLLSHYGDALSAVSDSSFWTARGLVSARVQAEFVRGGW 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R+ + + YP L D P L+ G+L L +AVVGSR Sbjct: 61 REKAADEQRRAQSFGFPAVFFGDRAYPDFLREIPDPPLFLYYLGDLTLLSRPCVAVVGSR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG L+ G+ + SG A+GID AH+ AL+ G +IAVLG GL+ ++P Sbjct: 121 GASRYGVDMAESMSAFLSASGICVVSGFAQGIDRAAHQGALRGVGGTIAVLGTGLDLVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + G +VSEF P NFP RNRI+SGLS GVLVVE AL SGSL+T Sbjct: 181 ASNTDLWKQVAAH-GLIVSEFAPGTRPDGINFPHRNRIVSGLSLGVLVVEGALGSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL Q R+VFALPGP +G H LI+QGA LV E+IL+ LQ L L Sbjct: 240 ANLALAQNRDVFALPGPANVKNYQGCHQLIRQGACLVQSGEDILQELQPRLGALCVPEAP 299 Query: 297 SFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ + + E VD + R G +V + LL +EL G + +P Sbjct: 300 VPEFLPREPDDPEQRVVHRLLAAGEALHVDTLTRRTGWAANKVSSTLLFMELQGLVRQLP 359 Query: 356 GGYVRLR 362 G Y L Sbjct: 360 GMYYVLA 366 >UniRef50_B3DUF8 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUF8_METI4 Length = 380 Score = 363 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 115/370 (31%), Positives = 188/370 (50%), Gaps = 11/370 (2%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLS 54 M ++LRL+ +S+ +++ + ++ + + GL + ++ Sbjct: 10 MDVSKIRLYLRLLQAASIGSKTALKMIKALGNIENVFQSSPRNISERCGLPTKMIEKIFK 69 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 K I+ + + ++ + EFYPP L P LF++G++ +A+V Sbjct: 70 PEEKTWIDQQINLCLKQQIDIVCYEEEFYPPLLREIDSPPLLLFIKGKIPKHWQNAIALV 129 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + R +A G + SG A GID AH AL NG + AVLG+G++ Sbjct: 130 GTRNPTPYGIQTARKLAYQIAYAGFPVISGFALGIDTQAHLGALAANGTTWAVLGSGIDH 189 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P ++ L+ + Q G L+SEFP+ P + FP RNRIISGLS GV++VEAA SG+ Sbjct: 190 CYPAQNYELSERISAQ-GLLISEFPMGTAPTRFTFPLRNRIISGLSVGVVIVEAAQGSGA 248 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ ALEQGR VFA+PG I NP S GP+ LIKQGA LV + ++ILE + + + Sbjct: 249 LLTAQLALEQGRLVFAVPGRIDNPCSFGPNQLIKQGAKLVDQLQDILEEIHYLHPKVKVD 308 Query: 294 PENSFYSPDQQ---DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + +++ + + D+ +D +AE+ V + L+ LE+ Sbjct: 309 SKKMNRKDQTPIAIELSKDERLVYEALNDQEMSLDELAEKTDLAVSVLCPLLIRLEMKKI 368 Query: 351 IAAVPGGYVR 360 + +PG Sbjct: 369 VQQLPGNRYA 378 >UniRef50_A0Y9A2 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9A2_9GAMM Length = 368 Score = 363 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 135/364 (37%), Positives = 191/364 (52%), Gaps = 6/364 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLS-FPR 57 +T WL L I L + R+ + I + L + + Sbjct: 4 DETRAWLALSRIPHLPRRVLHRLILATSSAEEIFQLSAFELTAAKVGAEAQKMLREGVDL 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + +E ++ + L+P S YP L D P L++ G+L L LA+VGSR Sbjct: 64 RQVEQDFKTVQLQHIKLLPVSSTLYPALLKEINDPPPLLYIRGDLSVLDLPSLAMVGSRR 123 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G F LA G +I SG+A G+D H+ AL G ++AVLG G++ ++PR Sbjct: 124 SSQAGGANAFRFARELAGAGFSIVSGMALGVDTQCHRGALAAGGSTVAVLGTGIDIVYPR 183 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R+ L S++ Q GA++SEFP+ P FPRRNRIISG+S GVLVVEAAL+SGSL+TA Sbjct: 184 RNKELFESIVCQ-GAVISEFPMGTDPHPARFPRRNRIISGMSLGVLVVEAALQSGSLITA 242 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDAPEN 296 RCA+EQGREVFA+PG I N GS+G H LIKQGA LV +++E L + P E Sbjct: 243 RCAMEQGREVFAIPGSIHNSGSKGCHQLIKQGAKLVESVSDVMEELKGWCADAPPVLEEK 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + +D+ LL +G + +D + +R P+ ++V + LEL G + V G Sbjct: 303 GAQNKVSKDLHERERLLLDIIGYDPVSIDSLQQRTDWPMHDLVALVTALELRGLLDCVAG 362 Query: 357 GYVR 360 Y R Sbjct: 363 SYQR 366 >UniRef50_A8ZW14 DNA protecting protein DprA n=3 Tax=Deltaproteobacteria RepID=A8ZW14_DESOH Length = 389 Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 182/376 (48%), Gaps = 15/376 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-F 55 M + W L S+ + R+ + + G++ A + Sbjct: 1 MENLTPWFTLKSVPGVGNLLFKRLIDRFGSPEKVLSAARSDLLGVQGISDTLASAIRAHK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +IE L + ++P YP L D P L+V G+L +++VGS Sbjct: 61 TPDNIEKVLETCARKAISIVPLTDPGYPALLREIHDPPPYLYVWGKLVPDAG-CISIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G+ + SG+ARGID AH AL NG++ AVLG+GL I+ Sbjct: 120 RSPTRYGLSMATQLSGELAAMGLCVASGMARGIDTAAHTGALDNNGLTYAVLGSGLCRIY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + GA++SEFPL P A++FP RNR+ISGLS G +VVEAA RSGSL+ Sbjct: 180 PPENMELARRI-AGQGAVISEFPLFAEPDAHHFPLRNRLISGLSLGTIVVEAAARSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP---- 291 TAR A+EQGREVFA+PG I + S G H L+KQGAILV + +++ + L P Sbjct: 239 TARLAMEQGREVFAVPGSITSFKSTGAHGLLKQGAILVEKASDVIAEISPRLAAGPATAP 298 Query: 292 ----DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELEL 347 A EN + +L + +D +A++A + LL+LEL Sbjct: 299 AASDRADENKHAGKPTPGLDTDEVRVLQTLEPYPVHIDEIAQKAAMAPGKTAGILLQLEL 358 Query: 348 AGWIAAVPGGYVRLRR 363 G++ PG + Sbjct: 359 KGFVTQEPGKRFLINP 374 >UniRef50_B6X9Q0 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6X9Q0_9ENTR Length = 369 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 153/361 (42%), Positives = 222/361 (61%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIWLRL+ ++ + + + + + I+ VL+ GL Q +FL+ I Sbjct: 11 MNELEIWLRLLQVNRISIKTIQTTISLLKQSNKINHTVLKACGLNEIQRLQFLNVSLTRI 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WLE + +I E YP L + P ALF+ G L QLAV+GSR + Sbjct: 71 ERTFRWLESKENQIITFLDEQYPFLLKQIYNPPLALFISGNSELLSERQLAVIGSRQVTE 130 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG++W LF G+TITSGLA GIDG+ H+ AL+ G ++AVLG+GL I+P++HA Sbjct: 131 YGKKWAELFVRKFIGHGLTITSGLALGIDGIGHRVALENQGKTVAVLGSGLAHIYPKQHA 190 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 191 DLAERI-RHEGVLVSEYFPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 249 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ REVF LP P+GNP G HWLI+QGA L+TEP++IL +L+ L+W+ E + Sbjct: 250 IEQNREVFTLPAPLGNPAFSGNHWLIQQGACLLTEPDDILMHLECSLNWIQPELEVDAST 309 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++ +L VG + TPVD++A + P+ ++++ L ELE+ G I++ GGY++ Sbjct: 310 ATELNLTES--RILGMVGYQSTPVDIIAAQLQLPITQIISVLTELEINGVISSAAGGYIK 367 Query: 361 L 361 + Sbjct: 368 V 368 >UniRef50_A4J600 DNA protecting protein DprA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J600_DESRM Length = 364 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 121/365 (33%), Positives = 186/365 (50%), Gaps = 10/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + W+ + G + I H + ++ A++ + Sbjct: 1 MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ +LE+ + ++ D E YP L D P A+FV G L +A++GS Sbjct: 61 KNIQFDNLEKYLEKISCKVLTIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA G+ I SG+ARGID +H+AAL NG+++AVLG G + ++ Sbjct: 121 RKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRAALMNNGMTMAVLGCGPDIVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + +L ++E+ GA+++EFP P ++FP RNRIISGLS V+V+EAA +SG+L+ Sbjct: 181 PRENEKLMKQIIEK-GAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGREV A+PG I NP S G + LIKQGA LVT +IL+ L + + Sbjct: 240 TADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQK 299 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 S + + ++LA + + ++ V + EV L LE+ G I ++P Sbjct: 300 KSKKVT----LEVNEKKVLAVLSEIPQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLP 355 Query: 356 GGYVR 360 G Sbjct: 356 GKMYI 360 >UniRef50_A8FP77 DNA protecting protein DprA n=21 Tax=Shewanella RepID=A8FP77_SHESH Length = 368 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 149/366 (40%), Positives = 215/366 (58%), Gaps = 4/366 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVA--KQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 WL + ++S L + ++ +++ + L +R L+ Sbjct: 4 EKLVDWLVVSAVSGLGPARIQQLLNYMDVEELRQRLEHEKDALPLPESLLKRELAPDFSL 63 Query: 60 IESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++S+L WL+ +HH++ D YP L +D P LF++GE L +AVVGSRA Sbjct: 64 VDSALDWLQSSSHHHIVTLDDPHYPNLLKQISDPPSILFIKGEPDTLLLPSIAVVGSRAA 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + G + L + G +++SG+A G+DG AH+A + + +IAVLG G+ I+PRR Sbjct: 124 TSAGLQSAYQLAGELGSIGFSVSSGMAAGVDGAAHQACIDNSAKTIAVLGTGVEVIYPRR 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H +L + + GA++SEF DV P A NFP+RNRIISGLS G LVVEA RSGSL+TAR Sbjct: 184 HKKLYEKI-QCHGAVISEFWPDVKPYAGNFPKRNRIISGLSLGTLVVEACRRSGSLITAR 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFA+PG I S+G H L++ GA LV +I+E + + + ++ Sbjct: 243 LALEQGREVFAVPGNILGGQSQGCHDLLRDGAKLVENAADIIEEVSVLCDFHLEELKSRH 302 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + LPF LLA+VG E TP+DVV E +G+ + V+ Q+LELEL GW+A VPGGY Sbjct: 303 HIGGENASDLPFTSLLASVGYETTPIDVVVEHSGKAIELVLEQMLELELQGWVAVVPGGY 362 Query: 359 VRLRRA 364 VRLRR+ Sbjct: 363 VRLRRS 368 >UniRef50_D2MIS6 SMF protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIS6_9BACT Length = 375 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 180/371 (48%), Gaps = 11/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E WL L S+ L + + + + + ++ R + Sbjct: 1 MEVLEAWLSLRSVKGLSDGTICTLVRHFGGPKEVLSASSSELRHVAGLRASVMTSLRNAP 60 Query: 61 E--------SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + + +E+ ++ YP +L D P L+V G L +A+ Sbjct: 61 DPSVVAHVRKEMRLIEKGASSIVTILDAAYPRRLAMIPDPPPVLYVRGTLPPADDHAVAI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR + G + F ++LA G TI SGLARG+D AH+ AL +IAV+G G++ Sbjct: 121 VGSRKATPAGALMTQEFSQSLAAMGFTIVSGLARGVDAAAHRGALTAKARTIAVVGCGVD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P H +L + E GA+VSE PL PPL Y+FPRRNRIISGLS GV+V EA +SG Sbjct: 181 RTYPPEHRQLRKDI-EVNGAVVSELPLGSPPLPYHFPRRNRIISGLSLGVIVSEANQKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TAR ALEQ REVFA+PG + N +G H LIKQGA LV E +++E L L Sbjct: 240 ALITARYALEQNREVFAIPGAVKNGKHQGAHSLIKQGAKLVEEAGDVVEELLLQLDGPFR 299 Query: 293 APENSF--YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + +LA V DE +D V +A EV++ LL LEL G Sbjct: 300 DRVKNAGFQETAVPVFTAKEQRVLALVHDEPVSIDEVLTQAPFDRAEVMSLLLSLELRGC 359 Query: 351 IAAVPGGYVRL 361 I VPG Sbjct: 360 IQQVPGSCYIR 370 >UniRef50_B5CSK6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSK6_9FIRM Length = 366 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 128/367 (34%), Positives = 191/367 (52%), Gaps = 6/367 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + + I L + + + + Q LT + Q Sbjct: 1 MGQEKYEVWFAGIRGLGARKKYLLHEALKSCRNAYYIEETQLKKFPFLTEKDGQEIRQAQ 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E +++ +IP SE YPP+LL D+P ALFV+G+L + + A++G+ Sbjct: 61 KRKDPEKICEEMKKKGIRIIPYYSEKYPPKLLQLADFPFALFVKGKLPGKDTEKAAIIGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YGE++ + LA GV + SGLARGIDG+ H+ AL G + AVLG G++ + Sbjct: 121 RNCTAYGEKYAVEYGRKLAQAGVDVISGLARGIDGMGHRGALMEKGKTFAVLGCGVDICY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L +LEQGG ++SEFP PPLA NFP RNRIISGLS +L++EA RSGSL+ Sbjct: 181 PREHIGLYMDILEQGGGILSEFPPGTPPLAVNFPLRNRIISGLSDVILIMEARERSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG+EV+ALPGP+ +P S G + LI+QGA ++ E +L L Sbjct: 241 TADLALEQGKEVYALPGPVDSPLSTGCNRLIQQGAGVLLSAENLLNEWGIMPDNL-CRKT 299 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +++ + + + VG V+ + G + +++ L+ LEL G+I V Sbjct: 300 EIKPDKNKKTLESEDELVYSCVGLYPKNVEHLVLETGLEIRKLMRVLVSLELQGYIKEVS 359 Query: 356 GGYVRLR 362 Y R Sbjct: 360 KNYYIRR 366 >UniRef50_B5JSS8 DNA protecting protein DprA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSS8_9GAMM Length = 373 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 194/371 (52%), Gaps = 10/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LSFP 56 M + WLRL +L R+ + + L++ GL+ Sbjct: 1 MDELSAWLRLWLAPNLGAATSARLVSTAGSAPAVLRMRPNQLRECGLSDEAIAFLQAEQS 60 Query: 57 RKSIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 S+ + W+E + LI YPPQL P L V G++ L QLA+VGS Sbjct: 61 PASVAQARDWVEAESARHLIYRGHPDYPPQLEDIARPPAVLAVLGDVSLLRDPQLAMVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ S G R F + LA +G+ +TSGLA GIDG H+ AL G ++AV+ G + ++ Sbjct: 121 RSASRQGAESARAFAKHLAAQGLVMTSGLALGIDGACHEGALASTGSTVAVMATGADRVY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +H LA ++ +GGALV+EFPL P +FP+RNR+I+GLS GVLVVEA LRSGSL+ Sbjct: 181 PAKHRDLAHRIVAEGGALVTEFPLGSTPQKSHFPQRNRVIAGLSTGVLVVEATLRSGSLI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A EQGREVFA+PG I P ++G H LIKQGA LV E+ILE L L Sbjct: 241 TARFAQEQGREVFAMPGSIHQPTAKGCHALIKQGAKLVESAEDILEELAPQLRARLAEGV 300 Query: 296 NSFYSPDQ-----QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + LL +G + +D + ++ E+ + LL LEL G Sbjct: 301 ETSVSASEALSADPPLDSDHEALLQAMGFDPVTLDALVQQTDFDASELASMLLILELEGR 360 Query: 351 IAAVPGGYVRL 361 ++A PGG + Sbjct: 361 VSAEPGGRYQR 371 >UniRef50_C7RA05 DNA protecting protein DprA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA05_KANKD Length = 363 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 150/367 (40%), Positives = 205/367 (55%), Gaps = 9/367 (2%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M + WL L I ++ + ++ + + + LQ+ G A++ S Sbjct: 1 MEQVELRHWLALSHI-NIGANKLLAFLEAGYAIGQLFELSEQALQEHGFRAGLAKKLSSV 59 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I+ L W + N L+P S YP L D P LFV+G+ L+ Q+A+VGS Sbjct: 60 TDDIIDQDLEWFDSENKSLVPITSRDYPALLREIPDPPKLLFVQGDKSLLNRHQIAIVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + G+ F +TLA G +TSG+A G+DG+AH+AAL V +IAV+G GL+ ++ Sbjct: 120 RNPTAQGKDNTCEFAKTLAAAGAVVTSGMALGVDGIAHQAALDVGQPTIAVVGTGLDRVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P RH +A + Q GALVSEF L P A NFP RNRII G+S G LVVEAA+RSGSL+ Sbjct: 180 PARHKEMAIQI-SQQGALVSEFALGTPVNASNFPVRNRIICGMSLGTLVVEAAIRSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+EQGREVFA+PG I N + G H +IKQGA LV EEI+E L W + E Sbjct: 239 TARLAMEQGREVFAIPGSIHNTLARGCHSIIKQGAKLVETAEEIIEELGALATWQTEHNE 298 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + + E+L V D T D + +R+G + V LL LEL +IA+VP Sbjct: 299 QAEAQDLV--LEKEYQEILQYVDDSTTSADTIIQRSGLEIEVVSHMLLLLELNNYIASVP 356 Query: 356 GGYVRLR 362 GGY R+R Sbjct: 357 GGYQRVR 363 >UniRef50_C9LM03 DNA processing protein DprA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM03_9FIRM Length = 363 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 14/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M+D L L M + + ++ L + FL++ Sbjct: 1 MMDIFA-AALPGCPRLGAKHMRTLIEAFGTAEDVWKASDKEIVESHLLKGKTEASFLAYR 59 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E L + + + + YPP L T + P LF +G + + +A+VGS Sbjct: 60 KETEPEEIGEKLYRLQIRCVTWEDDLYPPLLQTTANPPAVLFYKGN-NPVFEKTVAIVGS 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA GVT+ SG ARGID AH+ AL+ ++ L GL+ ++ Sbjct: 119 RKATPYGVQTAERIACGLAENGVTVISGGARGIDSAAHEGALRGESPTVVALACGLDHVY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L +++ GG ++SE+P PPL FP RNRII+G+S+G+LVVEAA RSG+L+ Sbjct: 179 PPENKNLFQKIIDNGGTIISEYPPGTPPLGRQFPARNRIIAGMSRGILVVEAAERSGALI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 T+ ALE+GR+VF++PG I S G + LI+ GAI T E+IL + + Sbjct: 239 TSDFALEEGRDVFSVPGNIWLDSSRGTNHLIRSGAICCTSYEDILSEYGW------NEKS 292 Query: 296 NSFYSPDQQDVALPFPELLA-NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 S + + L + E + + +++G V ++ LL L+L G+I Sbjct: 293 ISSKKESPEQLTLEEEVVYRFCCTGEEVTAEDILQQSGMSVMKITMLLLRLQLKGFIKET 352 Query: 355 PGGYVR 360 G Sbjct: 353 GSGRFI 358 >UniRef50_C1ZCA2 DNA protecting protein DprA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCA2_PLALI Length = 368 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 137/358 (38%), Positives = 195/358 (54%), Gaps = 5/358 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF-LSFPRKSIESS 63 L+LM I + R+ + + + L+Q GL+ A R L R + Sbjct: 10 LQLMLIPKIGPATYERLIQHLGSPTAVLEASAAVLEQAGLSSTLASRVSLGRDRAEARQT 69 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L E N + + YP +L P LF++G + A +A+VGSR+ S YGE Sbjct: 70 LQQCEALNIRATCLNRDDYPVRLKEIDRPPPVLFIQGSVTAADQLSVAIVGSRSPSVYGE 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + F LA GVTI SGLARG+DG+AH+AAL+ G ++AVLG G+N ++PR H LA Sbjct: 130 QMAKNFAGGLARAGVTIVSGLARGVDGLAHRAALEAGGRTLAVLGGGINQLYPREHIELA 189 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++EQ GAL+SE+ DVP +A FP+RNRIISGLS LV+EA+ +SGSL TAR A+EQ Sbjct: 190 RQVVEQ-GALISEYAPDVPAIAPQFPQRNRIISGLSLATLVIEASEKSGSLHTARHAMEQ 248 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 R+V A+PG + + S+G LI+ GAILV E++LE L + P + Sbjct: 249 HRDVLAVPGRVDSDASKGCLKLIRDGAILVRHVEDVLEALGHLSAPVQKPGGQVVQQPRE 308 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +LL VG E TPVD V + G ++ L LE+ + +PG +V Sbjct: 309 LLLNDQEQKLLQLVGIEATPVDTVLTQCGLEYSRALSTLTVLEIKKLVRRLPGNFVVR 366 >UniRef50_C0GWB1 DNA protecting protein DprA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWB1_9DELT Length = 381 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 119/371 (32%), Positives = 174/371 (46%), Gaps = 13/371 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--LQQTGLTLRQAQRFLS--FPR 57 + L L SL +I + A + GL + + Sbjct: 8 DEIWACLALSKTRSLGCKTWQKILEVFRSPAQALANSSHWAEMGLVSSSQAGIFNSGQWK 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + ++ ++ YP L P L+ G++ S LAVVGSR Sbjct: 68 SEAQREFERIQSGQEQVLIWSDSEYPEHLRHIAGPPVLLYYLGDISLAKSPSLAVVGSRN 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG C L+ +G+TI SG A GID AH+AAL G ++AVLG G++ I+P Sbjct: 128 SSAYGREMTSKICRELSEKGITIVSGFAEGIDREAHRAALSAPGSTVAVLGTGIDLIYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + + G ++SEFP P A+NFP RNRIISGLS GVLV++A ++SGS++TA Sbjct: 188 INQDLWTHIRDH-GLILSEFPRGTRPDAHNFPYRNRIISGLSLGVLVMQAEIKSGSMLTA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 AL+ REVFALPG + PG G + LI+QGAILV ++ILE LQ GL ++ Sbjct: 247 GYALDHNREVFALPGQVNLPGFSGCNQLIRQGAILVRTAQDILEALQLGLKNHLQQENDN 306 Query: 298 FYSPDQQ-------DVALPFPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 S D+ + + E T +D +++ + L+ LE+ G Sbjct: 307 EMSAPVPAEPALPGDLTSEEKAVAGELINRERTHIDDLSQCLDLSPSSISRILVNLEIRG 366 Query: 350 WIAAVPGGYVR 360 + PG Y + Sbjct: 367 MVRREPGMYYK 377 >UniRef50_C0QTM1 Protein smf (DNA-processing chain A) n=1 Tax=Persephonella marina EX-H1 RepID=C0QTM1_PERMH Length = 352 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 20/365 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRK 58 M + ++L I + + + + +I + + + A+ L + Sbjct: 1 MSAIDY-IQLSYIKGIGNKTLKLLINTFGSPENIFQLSFSELSSVVGSSVAELILKRDKS 59 Query: 59 ---SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 E E+ +I + YP L D P L+ +G L + ++VVGS Sbjct: 60 LKKKAEEEFLRAEKSGVKIIHFNDHSYPELLREIPDPPLYLYCKGRLDL--ARAVSVVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + L+ + V I SG+A GID +AH+ AL+ + ++ AVLG G++ + Sbjct: 118 RRFTSYGKTVTKQIVSYLSDQNVNIVSGMALGIDSIAHETALERSCLTTAVLGCGIDIAY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L ++E GA++SEFP+ PP YNFP RNR ++G+S +V EA+ +SG+L+ Sbjct: 178 PPENKKLYERIIE-NGAVISEFPMGTPPYKYNFPVRNRTVAGISYATIVTEASEKSGALI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GR VF++P I NP ++G + LIK GAI V + E I ENL + Sbjct: 237 TARLANDYGRVVFSVPANINNPLAKGNNILIKDGAIPVVDMESIDENLPYIKR------- 289 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +++ ++L + +D+++E+ V +++ L ++EL G I + Sbjct: 290 ---SDKEEINLSEIEKKILFILSS-PEHIDIISEKMNISVSDLMVILFDMELKGLITSEN 345 Query: 356 GGYVR 360 G Y+R Sbjct: 346 GIYMR 350 >UniRef50_C3WDA7 Topoisomerase n=6 Tax=Fusobacterium RepID=C3WDA7_FUSMR Length = 356 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 120/368 (32%), Positives = 187/368 (50%), Gaps = 17/368 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP 56 M E W RL + L R+ K I + + + L ++ S Sbjct: 1 MGALE-WYRLA-VKKLKDSSFRRVLEKFEKYEDIFKLDKIYLKKYCNLDEEDLEKIYSSK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +I L LE+ L+ + YP +L T P L+ G++ L ++ VVG+R Sbjct: 59 DVNILDELKKLEKNKISLLFIKDKEYPEELKNITKPPIFLYYRGDISLLSGKRIGVVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ L GVT SGLA GIDG+ HK L+ G +IAV+G+GL+ I+P Sbjct: 119 RATSYGKIACEKLVRELVENGVTTVSGLANGIDGICHKKTLEFQGKTIAVVGSGLDIIYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ + E+ G L+SE+P+ P AYNFP RNRII G+S+G++V+E+ + GSL+T Sbjct: 179 YENRKIWEEIGEK-GLLLSEYPMGTEPFAYNFPMRNRIIVGISQGIVVIESKAKGGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A ALE+GREVFA+PG I +P SEG + LIK GA LVT+ ++IL + Sbjct: 238 AELALEEGREVFAVPGEIFSPASEGCNTLIKNSGAKLVTDVDDILVEFGW--------NR 289 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ D+ ++ + E +D + E EV++ L++LE+ I ++ Sbjct: 290 EKKLKEEKLDLTDYEKKIYNTLVKE-KNLDEIIEETSMKASEVLSILMDLEVKKIIVSIA 348 Query: 356 GGYVRLRR 363 GG R + Sbjct: 349 GGKYRRKY 356 >UniRef50_A1WZH5 DNA protecting protein DprA n=8 Tax=Proteobacteria RepID=A1WZH5_HALHL Length = 388 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 126/365 (34%), Positives = 185/365 (50%), Gaps = 8/365 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 DT L L + + R+ + + L+ GL+ L+ Sbjct: 24 DDTLYALALARVPGVGPRTWSRLMAAFGGPAAVFRAGRSALRSLGLSAATESGILAPDWN 83 Query: 59 SIESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + WL+ P L+ YP +L D P LFV G+ LH Q+A+VGSR Sbjct: 84 AARTDADWLDGPGPRHLLRLAQPGYPRRLAEIPDPPPLLFVTGDPTTLHRPQVAIVGSRH 143 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R LA G+ TSGLA GID AH+ AL+ G ++AV+G + ++P Sbjct: 144 ATASGRDLARNLAGGLARAGIATTSGLATGIDAAAHRGALEAGGTTLAVVGTEPDQVYPA 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH RL A + GA++ E P PLA +FPRRNRI+SGLS GV+V++A SGSL+TA Sbjct: 204 RHQRLHAEITAS-GAVLGELPPGSGPLAAHFPRRNRIVSGLSLGVVVIQAGRHSGSLITA 262 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 R A EQGREVFA+PG I +P + G H L++ GA L+ ++IL+ + P + Sbjct: 263 RLAAEQGREVFAVPGSIHDPLARGCHALLRDGAKLLESIDDILKEFPGTVCEAPVNAPSE 322 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 SP +L +G + +D + +R+G + + + LL +EL G + AVPGG Sbjct: 323 STSPAA---DPDEARILEALGHDPLTLDTLQQRSGLTLDRLSSILLTMELKGLLTAVPGG 379 Query: 358 YVRLR 362 + R Sbjct: 380 RYQRR 384 >UniRef50_D1P7V1 DNA protecting protein DprA n=2 Tax=Providencia RepID=D1P7V1_9ENTR Length = 373 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 147/361 (40%), Positives = 226/361 (62%), Gaps = 3/361 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + EIW+RL ++ + + ++ I ++ +++ + +L++ GL Q +F P++ I Sbjct: 15 MNEQEIWIRLSLVNKVALEKVIEIISYLKQRNKVTHSILKECGLNEMQRLQFFHVPQQRI 74 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + WL+ + +I + YP L T + P LFV G L Q+A+VGSR + Sbjct: 75 EITTRWLQNKENQMITVSAPQYPFLLKQTYNPPLLLFVIGNSELLSDRQIAIVGSRQMTE 134 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ W + F + + G+TITSGLA GIDG +HK AL+ G ++AVLG+GL ++P++H Sbjct: 135 YGKTWTKNFVKKFISYGLTITSGLALGIDGASHKTALEHGGKTVAVLGSGLANVYPKQHY 194 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E G LVSE+ D PPL FPRRNRIISGLSK V+V+EA ++SGSL+TAR A Sbjct: 195 NLADEIKE-NGLLVSEYLPDTPPLPKQFPRRNRIISGLSKAVVVIEAGMKSGSLITARYA 253 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 +EQ R++F LP P+GNP G HWL++QGA L++EP++IL +L+ L+W+ Sbjct: 254 IEQNRDLFTLPAPLGNPAFSGNHWLVQQGAYLLSEPDDILLHLECSLNWIQPELSIESTP 313 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++ +L VG +VTPVDV+A + P+ V++ L ELE++G I + GGY+R Sbjct: 314 NSEFNLTEN--RILGMVGYQVTPVDVIAGQLQLPISRVISILTELEISGDILSTAGGYIR 371 Query: 361 L 361 + Sbjct: 372 V 372 >UniRef50_Q5N3V3 DNA processing protein n=4 Tax=Cyanobacteria RepID=Q5N3V3_SYNP6 Length = 406 Score = 356 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 108/369 (29%), Positives = 169/369 (45%), Gaps = 16/369 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FPR 57 ++ L L + L + R+ G+ L A+ + + Sbjct: 31 ESLYCLALSHVPRLGPALLRRLLMHFGCFEAAWEAPTTALLEVDGIGLLLAEAIATVRQQ 90 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVV 113 E+ ++ N H + YP L P L+ G L + + VV Sbjct: 91 HQPEALWEQHQRQNPHFLLWTDPAYPRLLREIPTPPPVLYYRGNLDLIQPPLDAVAIGVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YG RW +A G T+ SGLA G+D AH+A L+ G ++AVLG G+N Sbjct: 151 GTRDPSPYGRRWTGKLSGAIAQAGYTVISGLAYGVDTEAHQACLEARGKTVAVLGTGVNV 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ L ++LEQGG ++SE P P +FP RNRII+GLS+ +LV EA RSG+ Sbjct: 211 IYPPQNRALYEAILEQGGLILSEQPSGTQPDRGSFPARNRIIAGLSRALLVTEAPGRSGA 270 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A E R+V+ LP + NP + G LI+QGA + +L+ L+ P + Sbjct: 271 LITAHLANEFCRDVYILPNSLDNPKAAGCLSLIQQGAQPILGSGHLLDWLRQLPPLDPQS 330 Query: 294 P-------ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P + D++ ++ A + D+ D + E++G +V L LE Sbjct: 331 PPLMPSAVPSQEVEEAIADLSPEQAQVYALLSDQPISKDDIVEQSGLDFHQVQIHLTHLE 390 Query: 347 LAGWIAAVP 355 + G +P Sbjct: 391 ILGLAEVLP 399 >UniRef50_A4XIW6 DNA protecting protein DprA n=2 Tax=Clostridia RepID=A4XIW6_CALS8 Length = 380 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 7/363 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID--AVVLQQTGLTLRQAQRFLSFPRKS 59 WL L +I + +I + G + Q K Sbjct: 21 ERKLYWLWLYTIKGIGPKKFRQIKQEFGSLENAYLNRKEFNLEGFSSSIKQLIRDSDLKE 80 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAH 118 E L + + + ++I D FYP +L P +F +G ++ L + ++++VG+R Sbjct: 81 AEKVLEFCIKNSINIILEDDVFYPTELKNFDHSPVIIFAKGNVNVLKAQYKISMVGTREP 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 ++YG+R + +A + + + SG+ARGID H AL+ NG +IAVLG G++ ++P+ Sbjct: 141 TYYGKRVAKDLAGLVAQQNIVVVSGMARGIDTFCHMGALE-NGTTIAVLGCGVDIVYPKE 199 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +L ++E+ G ++SEF P NFP+RNRI++ LS ++V+EAA +SG+ T Sbjct: 200 NYKLYNQIVEK-GCVISEFLPKTLPDRMNFPQRNRIVAMLSPCLVVIEAAEKSGTFSTVD 258 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALE G+EVFA+PG I + S G + LIK+GA +V ++ LE+L+ + P Sbjct: 259 FALEMGKEVFAVPGNIFSQKSSGTNRLIKEGARIVCSYQDFLEDLREIYNLFPKQISLFD 318 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + +LL +VG+ ++ + +V + + LE+ G + G Sbjct: 319 VEEELSEEEYTILKLLDSVGEA--HIENLILLTNWSAGKVASVITSLEIKGKVVRERGNV 376 Query: 359 VRL 361 + Sbjct: 377 IVR 379 >UniRef50_A0KEX2 DNA protecting protein DprA n=2 Tax=Aeromonas RepID=A0KEX2_AERHH Length = 371 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 162/368 (44%), Positives = 217/368 (58%), Gaps = 8/368 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVA----KQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 +WL L +++ + R+ D L+ GL Q Q+ + +P+ Sbjct: 8 LALWLTLDAVTGIGPVTAARLLAHFGGDIVTLFDTDDGALRALGLQSVQVQQ-MRWPQPV 66 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +E +L W +P +HL+ D YP L P L+ G L AL QLA+VG+R + Sbjct: 67 VEQALSWAAEPGNHLLCPDDPAYPALLKEIPAAPLLLYCRGNLAALSVPQLAMVGTRHPT 126 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G+ C L G+ ITSGLA GIDGV H+ AL G ++AVLG+GL+ ++P+RH Sbjct: 127 YAGKDNAARLCSELVACGLAITSGLALGIDGVCHQQALAAGGTTLAVLGSGLDCLYPKRH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 LA +L +GG L+SE D PLA +FPRRNRIISGLS G LVVEAA +SGSL+TAR Sbjct: 187 QGLAMEILVRGGLLISELAPDKGPLAEHFPRRNRIISGLSLGTLVVEAAEQSGSLITARY 246 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 ALEQGREVFA+PG N + G + LI+QGA LV +I+E L + L + S + Sbjct: 247 ALEQGREVFAVPGAPQNVQALGCNKLIQQGAKLVLSAADIVEELPGFVGLLQQVADLSEH 306 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 S + + LP+ +LL NV E T VD VAER+ PV V+ +L+ELELAG + AV GGYV Sbjct: 307 SNNSE---LPYADLLDNVDYETTSVDTVAERSQLPVEVVLGRLVELELAGAVMAVAGGYV 363 Query: 360 RLRRACHV 367 R RRA HV Sbjct: 364 RARRANHV 371 >UniRef50_B3PGY9 Smf protein n=2 Tax=Gammaproteobacteria RepID=B3PGY9_CELJU Length = 387 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 138/379 (36%), Positives = 193/379 (50%), Gaps = 22/379 (5%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES--- 62 L ++ + ++ + L + Q + R S Sbjct: 9 LLILRLPETGTVTYWKLVDHFGSPEAALNQPAPYLEAFLRPQALQALEEYRRHPANSALA 68 Query: 63 -----SLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 L L+ + H +P + E YP L + P LFV G+ L QLA+VGSR Sbjct: 69 QKVAGDLEQLDANPDIHCLPLEHELYPELLRQIPNPPPLLFVRGDPGCLGLPQLAIVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R F LA RG TITSGLA GID AH+ AL+ +G ++AV+G G++ I+P Sbjct: 129 NPTRSGTDNARHFAAYLAERGFTITSGLALGIDAAAHRGALEASGKTVAVMGTGIDRIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA ++ QGGALVSEFPL A NFP+RNR+ISGLS G L+VEAA++SGSL+T Sbjct: 189 GRHRTLAQQIIAQGGALVSEFPLGTSSHAGNFPQRNRLISGLSLGSLIVEAAVQSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q REVFA+PG I NP + G H LI+QGA LV ++I+E L L + + Sbjct: 249 ASFALQQNREVFAIPGSIHNPLARGCHQLIRQGAKLVETGDDIVEELDGLLGFHRQQLQR 308 Query: 297 SFYSP-----------DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 S ++ +LL +G + +D + ER + QL+ L Sbjct: 309 SAVKQVQPLPTASTNMPLAELDPAATQLLEAMGYDPVNIDTLVERTSLDAGIIAAQLVSL 368 Query: 346 ELAGWIAAVPGGYVRLRRA 364 EL+G I + GGY+R+ A Sbjct: 369 ELSGAICTIAGGYLRVPNA 387 >UniRef50_B4D957 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B4D957_9BACT Length = 362 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 121/365 (33%), Positives = 183/365 (50%), Gaps = 10/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M TE + L + + + R+ + Q G+ A + Sbjct: 1 MNSTEASIALNMVPGVGPVRLRRLLEVFETPEQVLLAREGQLRAVDGIGAEVAAGIAHWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 K + + L +++ +I S YP L ++ P L++ GEL + VVGS Sbjct: 61 EKVDLTAELARIQEFGARVITQQSPEYPRMLQEISNPPIVLYIWGELTERDQQAIGVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + LA G+T+ SGLARGID AH+ AL G ++AV+G+GL ++ Sbjct: 121 RKTSHYGLECAKKLSYQLAYAGLTVVSGLARGIDTAAHQGALAAQGRTVAVIGSGLMDLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA + GA+VSEFP+ PP FP RNRI++G G LVVEA L+SG+L+ Sbjct: 181 PPENQALAEKITSS-GAVVSEFPMTFPPSTQTFPYRNRIVAGWGSGTLVVEAGLKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V+A+PG I P S G + LI+QGA LVT +IL++L+ Sbjct: 240 TATQALEHGRSVYAVPGQIDRPTSAGSNRLIQQGAKLVTGAADILDDLRILAPEPR---- 295 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +LA+V + TP+D++ ++G P+P+V + LL LE+ + +P Sbjct: 296 KMSTPVSAIPLSTEEQSILASVDNAETPIDLIVTKSGLPMPKVASTLLALEMKRLVKQLP 355 Query: 356 GGYVR 360 G Sbjct: 356 GQQFV 360 >UniRef50_B1C896 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C896_9FIRM Length = 383 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 24/379 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-----QQTGLTLRQAQRF-LSF 55 ++ E WL LMSI ++ + + + I + +G+TL A R + Sbjct: 1 MNIEKWLWLMSIQNIGAKRAINLYDYFGSIDEIYLNDDINKYTKVSGITLDIATRLTMDK 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQLAVVG 114 + + + I D ++YP L DYP LF G L + +++VG Sbjct: 61 DLNKFNRLIDKMYNEGINYITMDDKYYPYSLKEIYDYPPILFYRGKNLFVEENPMISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + R F + +G+ + SG+A GID AHK ALQ G +IAVLG+G++ I Sbjct: 121 TRKASNYGIQVARDFAREFSNKGLDVVSGMAAGIDTYAHKGALQGFGDTIAVLGSGVDKI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ +A+L ++E+ G ++SE+ PL+++FP RNRIISGLS G +V+EA+ +SGSL Sbjct: 181 YPKSNAKLYDEIIER-GMVISEYFPGTEPLSHHFPARNRIISGLSHGTIVIEASYKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQGREV+++PG I + EG + L+K GA L+ ++LE+L + L Sbjct: 240 ITARYANEQGREVYSVPGNITSALCEGSNSLLKDGAKLILSANDVLEDLYYVLDRPNMER 299 Query: 295 ENSFYSPDQQ----------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + +++ + + D D++ E G + + Sbjct: 300 ITDIIEAKEDRSFRQIKKEVNILDKYELSDDERNICQAILDGNNTADLINENLGLEINLI 359 Query: 339 VTQLLELELAGWIAAVPGG 357 + L LE+ G + + Sbjct: 360 NSVLTMLEIRGIVISTGAN 378 >UniRef50_C8VYJ2 Mg chelatase, subunit ChlI n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYJ2_DESAS Length = 748 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 94/369 (25%), Positives = 166/369 (44%), Gaps = 10/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSF 55 M+ E W+ L + + ++ I + G+ + ++ S Sbjct: 381 MMMEEYWIWLSQVKGIGPILQKKLLEKFGSPESIYLASGMELMTIAGINNKTVEKIQASR 440 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + L E+ N L+ YP Q+ + P + G L + + +VG+ Sbjct: 441 SLEQARQILNRTEKQNIRLLTYHDYLYPVQVKGFSKAPVLFYYRGNLRPNST-GVGIVGA 499 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG++ + LA + + + SG+A+GID AH A L+ G +IA+LG G++ + Sbjct: 500 RRCTDYGKQVTKEAATFLAKQDIPVISGMAKGIDSYAHTACLKAGGFTIAILGCGVDVCY 559 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H L + E+ G L+SE+P A +FP+RN I+ S +L+VEA +SG+L+ Sbjct: 560 PAEHRGLMDRIAEE-GVLLSEYPPQTRVRAEHFPQRNTWIAAWSNKLLIVEAGEKSGALI 618 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA+ A +Q R+V A+PG I + S G + LI +GA + P ++L + H Sbjct: 619 TAQLAEKQNRQVLAVPGQIYSQESIGCNQLIHKGAKIYLHPNQLLLDSGQKKHEQRINSN 678 Query: 296 NSFYSP---DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + ++ E+ ++ V+ +A G ++ L +EL G I Sbjct: 679 EAHRNKRVNEIPPLSQIEKEIYDHLSPIPQSVEQLAGILGSNPSALLRILCVMELEGKIE 738 Query: 353 AVPGGYVRL 361 GG R Sbjct: 739 LFAGGMARR 747 >UniRef50_C0QI82 DprA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI82_DESAH Length = 372 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 111/370 (30%), Positives = 182/370 (49%), Gaps = 9/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLS-----FP 56 + W + SI + R+ + +I A + +Q+ ++ Sbjct: 5 DNYLPWFIVKSIPGIGNHLYKRLINRFKTPENILAAKAAELKTIRGMSQKAITGIVHCTV 64 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K E +L + + ++ + YPP L D P +GEL+A +++VGSR Sbjct: 65 KKKAEIALATVLRGKIRVVTMNDPTYPPLLREIADPPPFFTFQGELNA-DLPCISIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG LA G + SG+ARGID AH AL G ++A+LG+GLN I+P Sbjct: 124 NATAYGLESAYRLGYDLAVLGFQVVSGMARGIDTAAHHGALAAKGKTMAILGSGLNWIYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF D P NFP RNR+I+G+S G +VVEAA +SGSL+T Sbjct: 184 RENQSLFQAIC-QTGVVISEFSPDTRPEPRNFPIRNRLIAGISTGTIVVEAANKSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP--DAP 294 AR A + REVFA+PG I + S G H LI+ GA LV ++++ L +H P Sbjct: 243 ARLAADFSREVFAVPGSINSHRSHGTHALIRAGATLVETHRDVIQELHHMVHTEPLDPLT 302 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + +++++ ++ + +D + E+ + + LL+LEL G + + Sbjct: 303 KPRGKNENKKELTRVELAIVTILEPYPLHIDKIVEKTDLDIASISAALLDLELKGMVRQL 362 Query: 355 PGGYVRLRRA 364 PG ++ Sbjct: 363 PGKLFSIKEE 372 >UniRef50_D2R8D6 DNA protecting protein DprA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8D6_9PLAN Length = 401 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 30/389 (7%) Query: 3 DTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP- 56 + +W +RL + + + + + G+ + Q+ S P Sbjct: 14 ENSLWEMRLAMLDGVGPRTRFNLVDRFGSAQEVFTASQHELRMVTGVGPKVVQQIQSPPA 73 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +E L ++P E YPP L+ D PG L+ +G L A +A+VG+R Sbjct: 74 WQEVEKLLDECTSLGIEVVPLADERYPPSLVNLPDPPGVLYQQGALQASDRQAIAIVGTR 133 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + F L+ G TI SGLARGID AH+ AL G +IAVLG+GL I+P Sbjct: 134 HATPYGLAQAKHFAYALSRAGYTIVSGLARGIDAAAHRGALDAGGRTIAVLGSGLACIYP 193 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + E+ GAL+SE P PP ++FP+RNRI++GLS GV+VVEAA RSG+L++ Sbjct: 194 PEHLDLAKEIAEK-GALLSEQPPHSPPTRFSFPQRNRIVTGLSIGVVVVEAAERSGALIS 252 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL------ 290 R A EQGREVFA+PG I + S+G H LI++GA L+ E +LE L+ Sbjct: 253 GRLAAEQGREVFAIPGRIDSRMSKGCHQLIREGAALIESVEHVLEQLESLGRDDLVPPSR 312 Query: 291 -----------------PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 A +P D++ +++ + E +D V R+ Sbjct: 313 VRGANAKQRSLPSDSSSDSAAAPPKLAPIPADLSAEERKIVELLSAEPMLIDQVTVRSKL 372 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRLR 362 P+ V++ L LE+ I+ V G V R Sbjct: 373 PISRVLSTLSVLEMKRLISRVGGNQVMRR 401 >UniRef50_Q1NY90 SMF protein n=3 Tax=Deltaproteobacteria RepID=Q1NY90_9DELT Length = 381 Score = 353 bits (907), Expect = 4e-96, Method: Composition-based stats. Identities = 125/375 (33%), Positives = 177/375 (47%), Gaps = 13/375 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLS-FPR 57 WL L+ L R+ + I A + GL A+ R Sbjct: 7 KRLLDWLTLLFTPGLGPVAAGRLLAGYGGMAAILAATAKDLQAHGLRPASAEALAQGSAR 66 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + L + + H + D YP L +D P L+ GEL AL +AVVGSRA Sbjct: 67 PRAQQELARIRRTGLHCLTLDDPAYPTLLREISDPPLVLYGRGELQALKRPAVAVVGSRA 126 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ LA G T+ SG A GID AH+ AL+ G + AVLG GL+ ++P Sbjct: 127 ATTYGKKIASRLGAELAAAGFTVLSGGALGIDSAAHQGALEAGGTTAAVLGCGLDVVYPP 186 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ +L ++ Q G L+ E+PL P A+ FP RNRIISGL+ G +VVEAA RSG+L+TA Sbjct: 187 QNRQLFHTIGRQRGLLLGEYPLGTQPEAFRFPARNRIISGLAVGCVVVEAARRSGALITA 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE---------NLQFGLH 288 +LE GREV A+PG I SEG H LI++GA LV +E+L+ Sbjct: 247 EMSLEHGREVMAVPGRIDTAKSEGCHRLIQEGAKLVHRFDELLQELLASPLTARFLPAKP 306 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + +P+ LLA + ++ + P P+V LLELE+ Sbjct: 307 ATASSAAAPTTTPEATPANAEEQALLATLDGYPRDIEEIIAACRLPAPKVNALLLELEIR 366 Query: 349 GWIAAVPGGYVRLRR 363 G + + PG R Sbjct: 367 GLVESAPGPQYRRAS 381 >UniRef50_Q31J83 DNA protecting protein DprA n=2 Tax=Bacteria RepID=Q31J83_THICR Length = 377 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 140/373 (37%), Positives = 197/373 (52%), Gaps = 15/373 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTGL-TLRQAQRFLSFPR 57 + WL L + + +I + S Q + L +Q +R Sbjct: 5 DNLHDWLLLHFA-RVNAKQLPQITSYFGSISQAMAASQASWQSSQLLKPKQLERLFDPDN 63 Query: 58 KSIESS-LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + S + W +QP ++ + YP L +D P L+V G++ L QLA+VGSR Sbjct: 64 DVLVSEAVAWSQQPEQTILTLEDAVYPELLKRISDPPILLYVRGDVSLLSEPQLAIVGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIAVLG 168 S G F + LA+ G+TITSGLA GID AH+ ALQ G ++AV+ Sbjct: 124 NASKQGRLTAMDFAQYLASVGLTITSGLASGIDKAAHEGALQAGASNSKTAQGTTLAVVA 183 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 GL+ ++P + LA + ++ GALVSE+PL P+A+ FP+RNRIISGLS G LVVEAA Sbjct: 184 TGLDRVYPAANRELARQIADR-GALVSEYPLGTKPMAHFFPQRNRIISGLSVGTLVVEAA 242 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 L+SGSL+TAR ALEQ REVFA+PG I NP ++G H LI+QGA LV ++ILE L L Sbjct: 243 LKSGSLITARTALEQDREVFAVPGSINNPQAKGCHQLIRQGAKLVESGQDILEELSVILQ 302 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + P S + +LL + E +D + + PV ++ +QL+ LEL Sbjct: 303 LSLNEPSKGQGSSPTKKDKEAPGDLLRYIEFEPIGLDELVVLSKLPVSDIQSQLMMLELE 362 Query: 349 GWIAAVPGGYVRL 361 G I A+ G R Sbjct: 363 GRIEALSAGRWRR 375 >UniRef50_B2UNG9 DNA protecting protein DprA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNG9_AKKM8 Length = 375 Score = 353 bits (906), Expect = 6e-96, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 180/371 (48%), Gaps = 9/371 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E + L I L ++R+ A I G+ + A R S+ Sbjct: 1 MTPREAAIALNLIPGLGPVRIMRLLQVFASPELILESPSSLLMEIPGVGAQLACRISSWR 60 Query: 57 R-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVG 114 + L + + + YP L A D P L+ G +AVVG Sbjct: 61 STVNPYRELELADNAGAAVTTVFDDSYPSSLRALPDPPIVLYSWGNWTGTDAERSIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG R LA G+T+ SGLARG+D AH A+ G +IAV+G GLN + Sbjct: 121 SRMATHYGRLCARNISHDLAEAGITVISGLARGVDTEAHTGAMDAEGRTIAVIGAGLNKL 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA + + GA+VSEFP+D+PP FP RNRI+SG S+ LVVEA+ RSG+L Sbjct: 181 YPRENRNLAQRIADGHGAVVSEFPMDLPPSRTTFPMRNRIVSGWSRATLVVEASGRSGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP--- 291 +TAR A EQGR+VF +PGP+ S+G H LI+ GAIL T +IL+++ + + Sbjct: 241 ITARTAAEQGRDVFCIPGPVDRHSSDGCHALIRDGAILATGASDILQDMNWAVPEQGLPL 300 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 +P + + L E+L + +D + G+ + L ++++AG I Sbjct: 301 FSPCSPAGASTPPLPTLEEKEILHAIRLGFNTIDTLCTSLGKAAHTITPLLAKMQIAGQI 360 Query: 352 AAVPGGYVRLR 362 GGY + Sbjct: 361 TPDAGGYFSIN 371 >UniRef50_C4Z5F1 DNA processing protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5F1_EUBE2 Length = 379 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 109/378 (28%), Positives = 175/378 (46%), Gaps = 17/378 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SF 55 M + W + +I+ + + + + I + G+ + + S Sbjct: 1 MKEDYYWYWVNNIAGISNMKLRTLFNAFDTPEQIYKASDKLLNSVSGIKEKDVSAIIESR 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + I LE+ YP QL+ DYP L+ +G L + +A+VG+ Sbjct: 61 NNEYIYRGYNDLERMKIKFTYPGKNDYPEQLMNIYDYPYILYYKGRLPQANVPAIAIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + + A G+ + SG+A GID A + A+ G S+AVLG G++ + Sbjct: 121 RNCTEYGRTIADMLAKCFADMGIQVISGMALGIDAAAQRGAVNKGGYSLAVLGCGVDVCY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + L L GG ++SE+P PP A FP RNRIISG++ ++VVEA +SGSL+ Sbjct: 181 PRSNIDLYTQLQNAGG-IMSEYPPGTPPRAGQFPMRNRIISGIADALIVVEARQKSGSLI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL--ENLQFGLHWLPDA 293 TA ALEQ R+V+ +PG IG+ SEG LIK+GA ++T P ++ E++ L+ Sbjct: 240 TADQALEQNRDVYVVPGRIGDSLSEGCLKLIKEGAQMITSPMDVCATESINRYLNKNIKQ 299 Query: 294 PENSFYSPDQ---------QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 + D +A P + + + ++ + + + E LLE Sbjct: 300 CDFPNDLNDAGIFEGNLKKSGLASPKNMVYSQINLFPVSLETIVNNSRISLVEAEGILLE 359 Query: 345 LELAGWIAAVPGGYVRLR 362 LEL G I V Y + Sbjct: 360 LELDGLIEEVSKNYYIRK 377 >UniRef50_Q48AU6 Putative DNA processing protein DprA n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AU6_COLP3 Length = 383 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 142/376 (37%), Positives = 197/376 (52%), Gaps = 16/376 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVA-----KQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 + E WL L + L + + + +V+ L+++Q F Sbjct: 8 NIEYWLALKFVPRLAIHKKIALVETFGLIALFSLDNKPSVLSSANNLSVKQLHAFHQPDW 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++I + N +I D +YP L D P +F++G L++ Q+AVVGSRA Sbjct: 68 QTITHIIHASAACNSAIICYDDTYYPQLLKQIYDPPLVIFMQGNPLLLNAPQVAVVGSRA 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S G C+ LA ITSGLA GID AH+ AL +IAV+ GL+ ++P Sbjct: 128 ASVGGRDTAFKICQQLAQHNFIITSGLALGIDAAAHRGALSEPASTIAVVATGLDQVYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA +++ GA++SEF A +FP+RNR+ISGLS GVLVVEA L+SGSL+TA Sbjct: 188 RHHSLAQKIIDSSGAIISEFVPGTQARAGHFPKRNRLISGLSLGVLVVEAELKSGSLITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 RCALEQ R+VFA+P I N ++G HWLIKQGA LV + +I++ F Sbjct: 248 RCALEQNRDVFAIPSSIENKQAKGCHWLIKQGAKLVEQCADIIDEFAFADKPSLHLKSEL 307 Query: 298 FYSPDQQDVA-----------LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 L LL +VG E+TPVD V R+ PV EV+T+L LE Sbjct: 308 KPLKSATHSTHKGGDEINQKVLCNDALLDSVGFEITPVDKVVLRSELPVEEVLTRLTMLE 367 Query: 347 LAGWIAAVPGGYVRLR 362 L G ++AVPGGY+R + Sbjct: 368 LNGLVSAVPGGYIRTQ 383 >UniRef50_D2TVJ2 DNA processing protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVJ2_9ENTR Length = 376 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 165/361 (45%), Positives = 229/361 (63%), Gaps = 5/361 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIWLR+ +S L + I + + +++ L+ GL+ Q +F K+I Sbjct: 20 MDPMEIWLRMRMVSHLSTVKITAIVEKLIEINNVKVASLRACGLSPHQCVQFTHANSKAI 79 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +++ WL+ H LI YP L P LFV G+ AL S Q+A+VGSR + + Sbjct: 80 YAAMKWLDVSEHKLITLSDPNYPYLLKQIYSPPIILFVAGKEKALSSTQIAMVGSRYNDF 139 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+W ++F + L TITSGLA GIDG++HK AL+ NG+++AVLG+GLN ++P +H Sbjct: 140 YGEKWAQIFSQELVMHKFTITSGLAIGIDGISHKTALRNNGITLAVLGSGLNKLYPTQHT 199 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSE+ D PPLA NFPRRNRIISGLSK V+V+ A L+SGSL+TA+CA Sbjct: 200 SLANKIKEK-GALVSEYLPDTPPLAKNFPRRNRIISGLSKAVIVIAAGLKSGSLITAKCA 258 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQG+++FALPG +GN EG HWLI+QGA L + P++I+E+L GL WLP + Sbjct: 259 LEQGKDIFALPGALGNSLYEGNHWLIQQGAYLASSPQDIIEHLNSGLKWLP----ENKIL 314 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 D + +L + E TP+D++AER+G V EV QLLE EL G + V GGY+R Sbjct: 315 SDNLHIDNSMNNILRYINFEPTPIDLIAERSGLSVIEVSAQLLEFELMGKVIFVSGGYIR 374 Query: 361 L 361 + Sbjct: 375 V 375 >UniRef50_Q3IDI0 Putative uncharacterized protein smf n=3 Tax=Alteromonadales RepID=Q3IDI0_PSEHT Length = 362 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 144/368 (39%), Positives = 194/368 (52%), Gaps = 14/368 (3%) Query: 1 MV----DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFL 53 M WL L ++ ++ + + QQ GL+ QA L Sbjct: 1 MDQSSGKLAHWLAFYMCKGLGIKTLLALSKNH-SLESLFGLSHQQLLQLGLSANQATNLL 59 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + I + N +I YP L P LF +G++ L S Q+A+V Sbjct: 60 HTNWQQITHYEQLILHNNITVISIFDAAYPEDLKQIASAPLLLFCKGDVSFLTSPQIAIV 119 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + G F L G+TITSG+ARGIDG AHK AL +G +IAVLG G++ Sbjct: 120 GSRNATPTGLEIAAEFAYQLTLAGITITSGMARGIDGAAHKGALAGSGKTIAVLGTGVDI 179 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P++H L +LEQ G LVSEF A+NFPRRNRIISGLS GVL+VEA ++SGS Sbjct: 180 YYPKQHKLLTNQVLEQ-GLLVSEFLPGTAANAHNFPRRNRIISGLSLGVLIVEAEIKSGS 238 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+T R ALEQ +EVFA+PG I NP ++ H+LIKQGA LV +IL+ + F Sbjct: 239 LITVRYALEQNKEVFAVPGSIKNPLAQASHFLIKQGAKLVENVSDILDEVSFAYQSGFLT 298 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 PE S + E+L ++G EVT VD + RA P+ +V +LL+LEL I Sbjct: 299 PEQSTQTNK-----DSQCEVLNSIGFEVTSVDDIVRRAQWPIDKVQARLLDLELDDQIER 353 Query: 354 VPGGYVRL 361 V GY+R+ Sbjct: 354 VLDGYIRV 361 >UniRef50_A4IYW5 DNA processing protein DprA n=9 Tax=Francisella RepID=A4IYW5_FRATW Length = 368 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 185/358 (51%), Gaps = 6/358 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC- 65 + L V+ + I + + + ++ L Sbjct: 9 LIILSITPYFGNTRFVKAKENNFDFNEIINSPSKYIKTLSLRQESIDFLNQRKYLEYLDK 68 Query: 66 ---WLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 WL+ + +I YP L ++ P L+ G L+S QLA+VG+R HS Y Sbjct: 69 VSKWLDSSGKNQIITYLDNRYPSDLKQISNPPLILYCSGNSDLLNSQQLAIVGARNHSSY 128 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G+ C L +TI SGLA GID +AHK A+ N +IAV+G G++ ++P + Sbjct: 129 GKNVTAKLCADLKDSKLTIISGLAYGIDTLAHKYAIDNNLSTIAVVGTGVDVVYPSSNRE 188 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ G ++SEFPL PL YNFP+RNRIISGLSKGV++VEAA +SGSL+TA AL Sbjct: 189 LYNKIINTNGLIISEFPLGTGPLRYNFPQRNRIISGLSKGVVMVEAASKSGSLITAELAL 248 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQ +EVFA+PG I + S+G + LIKQGA LV +ILE + + + ++ + Sbjct: 249 EQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVCNVNDILEEIDIASNTSQTSSTDNQVNK 308 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + +L ++ E+T +D + ++ P +V + L ELEL I ++PGGY+ Sbjct: 309 -IISLNKSERIILGSIDRELTTIDKIIIKSKLPYNQVTSILFELELKSLIESIPGGYI 365 >UniRef50_D0KVS6 DNA protecting protein DprA n=3 Tax=Proteobacteria RepID=D0KVS6_HALNC Length = 384 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 195/370 (52%), Gaps = 10/370 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPRK 58 L L++I+ + + + A + GL A + Sbjct: 13 DARRALLFLITINGMGPKRLRCLLDAFDTPQAALAAPASEWIRLGLPASLANQHPRGMAD 72 Query: 59 SIESSLCWL-EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +E+ L WL E HHL+ A + YPPQL D P ALF +G++ L QLA+VG+R Sbjct: 73 RVETMLSWLDESEQHHLVLAGEKSYPPQLADLPDAPAALFGKGDIRLLGEPQLAIVGART 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G R F L+ +G+ ITSGLA GID AH+ AL +G S+AV+G G + I+PR Sbjct: 133 PTSGGINNARAFARYLSAQGLVITSGLALGIDAAAHRGALAAHGASVAVMGTGPDIIYPR 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H LAA ++ QGG L+SE+P +FPRRNR+ISGLS+GVL+VEA+L+SGSL+TA Sbjct: 193 EHQALAAEIVAQGGLLISEWPPGTTARKEHFPRRNRLISGLSEGVLIVEASLKSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------QFGLHWLP 291 R A EQGREVFA+PG I NP S GPH LI++GA LV ++I E L + Sbjct: 253 RLAAEQGREVFAIPGSIHNPLSRGPHRLIREGAKLVETAQDIFEELIDNLGARLRQTDDT 312 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E + ++L +G + D + +G EV + LL LELAG + Sbjct: 313 SLFEPESSPALAAHLDPEQQKILDCLGFDPQSADTLIASSGLTPAEVSSILLMLELAGHV 372 Query: 352 AAVPGGYVRL 361 +PGG Sbjct: 373 TTLPGGLYVR 382 >UniRef50_P73345 Protein smf n=8 Tax=Cyanobacteria RepID=SMF_SYNY3 Length = 398 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 172/395 (43%), Gaps = 36/395 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFL-SFPR 57 + WL + + + R+A + G + ++ + Sbjct: 5 EQAYWLAWSQVKGVGPVLLKRLAQHFELLENAWKARPIALGEVEGFGHKMIEKIIGQRNN 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVV 113 + L +Q N + D YP L P L+ G L S + +V Sbjct: 65 LNPFQFLEEHQQKNPQFLTPDDPDYPRLLWEIPSPPPVLYYLGRLDHRESQGQIPGVGIV 124 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G RW R + L G TI SGLA GID AH + L+VNG +IAVLG GL+ Sbjct: 125 GTRYPTDHGSRWTRKISQALVKSGFTIVSGLAAGIDADAHSSCLRVNGRTIAVLGTGLDL 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P ++ +L + + G ++SE+P+ P NFP RNRII+GLS+ VLV+EA +SG+ Sbjct: 185 IYPPQNRQLFEQIAAE-GLILSEYPVGSKPERGNFPARNRIIAGLSRAVLVMEAPPKSGA 243 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ A E R+VF+LP + G LI GA ++ ++L +L Sbjct: 244 LITAKYANEFNRDVFSLPNSPDVQEAHGCLNLIHNGAEVILSENQLLASLGAIPLLDQGQ 303 Query: 294 PE--------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 + + +D+ ++LA V +E T +D + Sbjct: 304 EQKILPGDRQIGYLDQTNVPTLTTGARGKQPLTEPPEDLEPTLKKILAAVQEEPTALDQI 363 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +V LL+LE+ G ++ PG + R Sbjct: 364 VAVTALAIGDVSAGLLQLEILGLVSQEPGMRYQRR 398 >UniRef50_B2A332 DNA protecting protein DprA n=2 Tax=Firmicutes RepID=B2A332_NATTJ Length = 349 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 119/357 (33%), Positives = 192/357 (53%), Gaps = 17/357 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRKSIESSL 64 L I L + + ++ W + ++ G++ A+ + + ++ + Sbjct: 3 LKLIPGLGNNRIKKLIQWFGCGEEVWNSSIENLLEVSGISYDLAENIVVHRSKIDLQKKV 62 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + + +I E YP L D P L+ +G++ L++ +LAVVG+R + YG+ Sbjct: 63 NEIMEQGIKIILP--EEYPESLQEIYDSPVLLYAKGDVSLLNTRKLAVVGTRKITSYGDI 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + ++ +TI SGLA+G D AH LQ G +IAVLGNGL+ I+P + L Sbjct: 121 VIKNIIPSVTRADITIVSGLAKGTDAKAHYRCLQEGGKTIAVLGNGLDIIYPPENRELYK 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + E+ G L+SE+P ++ P ++FP+RNRIISGLS+GVLV+EA +SG+++TA+ AL+Q Sbjct: 181 QISEK-GLLISEYPPELGPQKFHFPQRNRIISGLSEGVLVIEAPKKSGAMITAQLALDQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G + LI QGA +VT+P++IL ++ L + +N Sbjct: 240 REVFAIPGNINNPCSQGCNALIAQGAKVVTDPDDILTEYNLTVNMLIEESKNR------- 292 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +L + +D + ++ T LLELEL GWI GGYV Sbjct: 293 -LSSSQKAILEKIPYYEISIDELLSSTNTD-KDIYTCLLELELNGWIMRRLGGYVIR 347 >UniRef50_B0C0E4 DNA protecting protein DprA n=8 Tax=Cyanobacteria RepID=B0C0E4_ACAM1 Length = 376 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 105/374 (28%), Positives = 170/374 (45%), Gaps = 15/374 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M + WL I + + R+ S + G + + + Sbjct: 1 MEERPYWLAWSLIPGIGPVVLKRLQQRFGTLSSAWSADSGTLGAVTGIGAQTLKTIQKHR 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLA 111 + + L Q N + YP L D P L+ G++ + + Sbjct: 61 QSTNPTDLLAQHIQKNPSFWCMADQAYPRMLTEIADSPPLLYYRGQVQLSENQGSTPMVG 120 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R S Y +RW R LA RG+T+ SG+A GID AH ++ G +IAVLG G+ Sbjct: 121 IVGTRDPSEYAKRWTRKIAYALAKRGITVVSGMAEGIDTQAHLGCIEGGGRTIAVLGTGV 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P R+ L + EQ G L+SE+P P +FPRRNRI++GL + +LV+EA +S Sbjct: 181 DMIYPPRNQGLYQKI-EQQGLLLSEYPSGTQPNRAHFPRRNRIVAGLCRALLVMEAPTKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+L+TA A E R+++ LPG + NP + G L+++GA L+ ++L+ L Sbjct: 240 GALITAYQANEYNRDIYVLPGSLDNPRAMGCLGLVQRGAQLILGIGQLLDQLGAMPPLSS 299 Query: 292 DAPENSFYSPDQ-----QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + P ++ +L GD P D++ + EV ++L+LE Sbjct: 300 APAPSISEIPSTLPSVQAEILKTVSQLCQQSGDGSVPFDLIVQSVELSAGEVSGEILQLE 359 Query: 347 LAGWIAAVPGGYVR 360 L G + +PG Sbjct: 360 LQGLVNQLPGMRYA 373 >UniRef50_Q15ZY0 DNA protecting protein DprA n=4 Tax=Gammaproteobacteria RepID=Q15ZY0_PSEA6 Length = 379 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 157/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHW-VAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 + WL L + + I + + + +Q G T Q Q+ + Sbjct: 16 EQRQWLILAQLPRFSVAKLATILRKNAIQVADLFNANPKQLAAYGFTDGQIQQLQHPNER 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ SL W EQ + L+ S+ YP LL T P L+ G L++ Q+A+VGSR Sbjct: 76 RLDKSLQWSEQTSSSLLNITSKHYPKVLLQTARPPILLYCLGNKDLLNTHQIAIVGSRNP 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G++ + F + L+ G T+TSGLA GIDG+AH L+V G ++AVLG GLN I+P+R Sbjct: 136 SIAGKQNAQYFAQGLSQCGWTVTSGLALGIDGLAHDGVLKVQGNTVAVLGTGLNNIYPKR 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H ++A S+LEQGGALVSEF ++P NFPRRNRIISG+S G L++EAA++SGSL+TAR Sbjct: 196 HVKMADSILEQGGALVSEFVPEMPAKPENFPRRNRIISGMSLGTLIIEAAIKSGSLITAR 255 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQ R+VFA+PG I N S+G H+LIKQGA LV +I + Q + ++ Sbjct: 256 YALEQNRDVFAVPGNINNVLSKGCHYLIKQGAKLVECVGDINDEYQHLALNFLNIQQSEL 315 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +Q +A +LL +V E TP+D+V ER G PV EV++QLLE EL G +AAVPGGY Sbjct: 316 QKSARQSLASD--KLLDSVDFETTPLDIVVERCGMPVAEVMSQLLEYELRGLVAAVPGGY 373 Query: 359 VRL 361 ++L Sbjct: 374 LKL 376 >UniRef50_C0ZFB1 Putative smf protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFB1_BREBN Length = 356 Score = 348 bits (894), Expect = 1e-94, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 176/357 (49%), Gaps = 7/357 (1%) Query: 12 SISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS-IESSLCWL 67 IS L + I + ++ GLT + ++ + L Sbjct: 1 MISGLGRKKIREIFEITGSFQIAIENWHELARELGLTSLITGQVDQQSNEAPAMALLEKR 60 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E+ + + YP L D+P LF G+ L + VVGSR + YG Sbjct: 61 EEEGTRFLCPFDDAYPASLRNIPDFPWTLFYRGDHTLLDKLSIGVVGSRKPTPYGRASCS 120 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L G+ I SG+A GID AH+A L+V G +I VLG G+ ++P RH L + Sbjct: 121 FFVRELVQAGLVIVSGVAYGIDAEAHQATLKVGGKTIGVLGCGMKHVYPSRHRELYRQI- 179 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 E G L+SE+P +PP++ FP RNRIISGLS GVLVVEAA +SGSL+TA CALEQG+EV Sbjct: 180 ESFGLLLSEYPPHIPPISGLFPERNRIISGLSIGVLVVEAAEKSGSLITADCALEQGKEV 239 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEI-LENLQFGLHWLPDAPENSFYSPDQQDV 306 FA+PGPI + S GPH LIKQGA LVT +I E + D + Sbjct: 240 FAIPGPIFSLMSAGPHNLIKQGAKLVTCSNDIWDEIKHHLPEAKQMQQVKKSNATDVIPL 299 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL-LELELAGWIAAVPGGYVRLR 362 + ++ V + +D + + +++ QL + LE G I A+PGGY R Sbjct: 300 SNEEKAIVEAVTYDGIHLDELMSCLEKDQRKMLHQLVIRLEAKGAILALPGGYFARR 356 >UniRef50_B9ZKQ7 DNA protecting protein DprA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKQ7_9GAMM Length = 377 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 125/360 (34%), Positives = 190/360 (52%), Gaps = 3/360 (0%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQ-RFLSFPRKSIES 62 WL L++ L ++ + A + + + + Sbjct: 11 QRAWLELINTPGLGHQRLLHLVEAFGGPGAALAASPSEWRHHGVELNIDPAARTAAADAD 70 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + HHL+ D YPP L D P L++ G+ LH Q+A++G+R + G Sbjct: 71 QAWLDQDERHHLLCRDDPDYPPLLAEIPDPPPVLYLNGDPSLLHRPQIAIIGARECTPQG 130 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNTIHPRRHAR 181 ER F LA GV +TSGLARGIDGVAH+ AL G +IAV+ G + I+P +H R Sbjct: 131 ERLAGEFARELAGAGVVVTSGLARGIDGVAHEGALAAPGGRTIAVVATGPDRIYPAQHRR 190 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + + G +VS +P PLA NFP+RNR+ISG++ G +VVEAAL+SGSL+TAR A Sbjct: 191 LAHRIADH-GLVVSLWPTGTRPLARNFPQRNRVISGMALGTVVVEAALKSGSLITARLAA 249 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGR+V+A+PG + +P S G H LI+ GA LV +E+LE+L L P ++ P Sbjct: 250 EQGRQVYAVPGSVLSPVSRGCHRLIRDGAQLVESADEVLEDLADWLGVAPGETASTPPEP 309 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + +L +G + P++ + +R + + + L+ LEL G +AA+ G + Sbjct: 310 AREPLDPEQERVLNAMGFDPIPLETLRDRTKLTIERLSSMLVLLELNGRVAALDHGRYQR 369 >UniRef50_B4WQ31 DNA protecting protein DprA, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQ31_9SYNE Length = 411 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 113/409 (27%), Positives = 179/409 (43%), Gaps = 50/409 (12%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS-FPR 57 + WL + + + R+ + G+ L A+R +S + Sbjct: 4 ERAYWLAWSQVKHVGPVTIKRLWEHFGTLELAWQATASELLKVDGIGLLSAERIVSVRSK 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA--LHSFQLAVVGS 115 + E L E+ N YP L A D P L+ G L L+ + +VG+ Sbjct: 64 LNPEQLLVEHEKKNKAFWTPVDADYPALLFAINDPPPVLYYRGSLRLSDLNRLTVGIVGT 123 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+RW + + L+ +G I SGLA GID AH L G+++AV+G G++ ++ Sbjct: 124 RRPSTYGKRWTQRLSQRLSQQGAVIISGLAAGIDTEAHTGCLYQQGLTVAVVGTGVDIVY 183 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ L ++E G +VSE+P P +FP+RNRII+GLS+ +LV EA RSG+L+ Sbjct: 184 PARNQSLYQQVVE-NGLVVSEYPDGTGPDRTHFPQRNRIIAGLSRAILVTEAPARSGALI 242 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GREV+ALP +GN EG LI +GA ++ + +++ L+ A Sbjct: 243 TARLANDYGREVYALPSALGNEQGEGCLRLIAEGAQIILGEQVLMDTLEKLPAVDSSAVP 302 Query: 296 NSFYSPDQQ------------------------------------------DVALPFPEL 313 N S ++ + Sbjct: 303 NRTVSSQSDLLKKTTSEKVSSKRDIDTKAVGNLETSEALEINSTDLKKAISELTPVLANV 362 Query: 314 LANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 L V E T VD + ++ V++ L +LEL+G + +PG + Sbjct: 363 LEAVAIEPTIVDYIVQQTQMETGIVLSALFQLELSGMVIQLPGMQYQRA 411 >UniRef50_C1F6U9 DNA protecting protein DprA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6U9_ACIC5 Length = 401 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 126/379 (33%), Positives = 180/379 (47%), Gaps = 15/379 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG---LTLRQAQRFLS-FPRK 58 D W+ L + +++ + + L Q L AQ + Sbjct: 21 DRLAWVALALTPGMGPRRILQAVEAAGSAQALLDLPLTQLESLRLPAEAAQFLHDGRALR 80 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + + ++ E YP +L D P L+V G+ L +AVVG+R Sbjct: 81 AAQQEAERVAAAGAQIVTCIDEAYPERLREIYDAPPILWVRGDASLLKRPSIAVVGTRHP 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + LA G+ I SG+ARGID AHK AL ++A+ G G++ I+P+ Sbjct: 141 TPYGAGMAEMLSRDLAANGLLILSGMARGIDTAAHKGALAAKKPTLAIWGTGVDVIYPKE 200 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA ++ GGA+VSE PL P NFP+RNRI+SG+S GVLVVE SG+ VTAR Sbjct: 201 NKALAEQIVATGGAIVSELPLGTFPAPQNFPKRNRILSGISFGVLVVEGGEFSGTRVTAR 260 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 CALEQ REVFA+PG + N + GP+ LIKQGA L E++ E+L + A Sbjct: 261 CALEQSREVFAVPGNVTNKQAWGPNTLIKQGAKLTATWEDVWEDLPTDVRVAVTADAVVA 320 Query: 299 YSP-------DQQDVALPFPELLANVG-DEVTPVDVVAERA--GQPVPEVVTQLLELELA 348 D A LL + DE ++ + ++ E+ T L ELELA Sbjct: 321 SPEPVTASLFDDNTAAPVEAALLRILRHDEALQMEEILQKLEGELSSSEIFTALFELELA 380 Query: 349 GWIAAVPG-GYVRLRRACH 366 G I +PG YV+ A Sbjct: 381 GRIRQLPGKNYVKSFPAAR 399 >UniRef50_A6FE49 Smf protein n=1 Tax=Moritella sp. PE36 RepID=A6FE49_9GAMM Length = 368 Score = 348 bits (892), Expect = 2e-94, Method: Composition-based stats. Identities = 158/362 (43%), Positives = 219/362 (60%), Gaps = 7/362 (1%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKSIES 62 WL L + + G +++ + + + L GL Q Q L+ +SI+ Sbjct: 8 YWLALYDVPKIGGSRALKLLQK-TSLTKLFSGSTRYLHSLGLDTAQQQAVLNPDWQSIDR 66 Query: 63 SLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 +L WL ++ LIP + YP L P L+VEG + L Q+A+VG+RA S+Y Sbjct: 67 NLQWLAAEDNRYLIPITASDYPITLKNIAAPPLLLYVEGNVELLSKPQIAMVGTRAPSYY 126 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G+R F L +G+ ITSGLA G+D H++ L G +IAVLG GL ++P+RH + Sbjct: 127 GKRHAHSFAAELVQQGLVITSGLAIGVDSECHRSVLAAKGETIAVLGTGLANVYPKRHLK 186 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA + E+ GALVSEF +FPRRNRI+SGLS GV+VVEAAL SGSL++AR AL Sbjct: 187 LAQQIREK-GALVSEFSPFTQARPEHFPRRNRIVSGLSLGVVVVEAALNSGSLISARYAL 245 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGREVFALPG I NP + G H+LI+QGA L+T+ +I + L + + ++ Sbjct: 246 EQGREVFALPGAIDNPAAAGCHYLIQQGAKLITQTSDITDELTYINVRTNFE-QTDLFNS 304 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 D + V+LP +L NVG EVT D++AER+ QPV +V+T L+ELEL W+ AVPGGYVR Sbjct: 305 DLETVSLPNQTILDNVGYEVTTADLIAERSQQPVSQVLTSLMELELDNWVNAVPGGYVRS 364 Query: 362 RR 363 +R Sbjct: 365 QR 366 >UniRef50_Q67PC8 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67PC8_SYMTH Length = 386 Score = 347 bits (891), Expect = 3e-94, Method: Composition-based stats. Identities = 105/370 (28%), Positives = 163/370 (44%), Gaps = 16/370 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M +WL + M ++ + + G + L+ Sbjct: 22 MEGALVWLIYQRAPGVGRRRMAQLMRTYPDPEVAWRLGKAELAAVRGFRPDIVEALLAVR 81 Query: 57 R-----KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + + E L + ++ + YP +L P L+ G +A Sbjct: 82 KSAEARRDAERELERARRAGLRVLCYGTRGYPERLAEIPVPPPVLYQYGPWEPDGRPVVA 141 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + YG LA G + SG+ARGID AH+ AL+ G S+AVLG G Sbjct: 142 IVGTRRPTAYGLAVAEQLGRELAQLGAVVVSGMARGIDTEAHRGALEAGGTSVAVLGGGA 201 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P+ A L + E GA++SE P P NFP RNRII+GLS GV++VEA RS Sbjct: 202 DVCYPQESAALYRQMRET-GAILSEQPPGTAPRPENFPERNRIITGLSHGVILVEAGERS 260 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+L+TA A+EQ R++F +PGP+ +P S G + ++ GA L ++LE+L F Sbjct: 261 GTLITAAHAIEQDRDLFVVPGPVTSPLSRGLYKYVRDGAGLAVSAAQVLEDLGFLPSA-- 318 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + +L +G +AE +G P+PEV L LE+ + Sbjct: 319 ----EGPLHFTPRGLTELEQRVLGWMGSAPWWPGDLAESSGLPLPEVQACLTMLEIRSAV 374 Query: 352 AAVPGGYVRL 361 +P G Sbjct: 375 RRLPDGQYIR 384 >UniRef50_C6PXR7 DNA protecting protein DprA n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXR7_9CLOT Length = 364 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 173/369 (46%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M W+ L ++ ++ +I ++ G+ + A + Sbjct: 1 MD--IYWIWLSETPNIGDVIGKKLLEEFKTPKNIFDADKEELMNVEGIGEKTANLIFNSK 58 Query: 57 RK---SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + E+ + E+ N L+ + YPP++ D P L+ G + + +V Sbjct: 59 YEVMNRSETIMKKCEKNNIKLLNINDSSYPPKVKNIQDSPILLYYLGTITKDCM-GVGIV 117 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG++ + E LA +++ SG+A+GIDG +H A + G +IA LG G++ Sbjct: 118 GSRRCTSYGKKIAKEAAEFLAENNISVISGMAKGIDGYSHTACINSGGYTIAFLGGGVDK 177 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+ H +L ++ + GA++SE+P P NFP+RNR+IS S +LVVEA SGS Sbjct: 178 VYPKEHIKLMEEIIAK-GAVISEYPPGTKPYPKNFPKRNRLISAFSNKLLVVEAGEDSGS 236 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA+ A + REVFA+P I + S G + LI GA L +++L++ + Sbjct: 237 LITAQFAKKYNREVFAVPNNIFSKESRGCNKLILNGATLYIFQQQLLDSYS-NITSKNKY 295 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 ++ + V +L + E ++ + +V+ +L +EL G I A Sbjct: 296 CISNVQVKNNLKVDYIEKIILNAINKEPKTIEQLQVIVNDDKVDVLEKLSLMELDGKIKA 355 Query: 354 VPGGYVRLR 362 G + L Sbjct: 356 FQGKFYSLA 364 >UniRef50_A3ZMW3 DNA processing chain A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMW3_9PLAN Length = 407 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 6/360 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIESS 63 LRL +S + + + + A + G+ + +Q+ + I+ Sbjct: 48 LRLALVSGVGPRTSQVLLERFGTHAGVLAATRSELERVSGVGPKLSQKITTAGEIDIDRE 107 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ + YP L D P LF+ G++ + +A+VG+R S YG Sbjct: 108 ISLCVDFDVDIMALEDARYPHLLTEIPDPPSILFLRGDISPADAMSVAIVGTRHASSYGL 167 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 F LA G T+ SGLARGID AH+ AL+ G +IA L +GL +I+P H LA Sbjct: 168 AQAERFGYELAKAGFTVVSGLARGIDAAAHRGALRAGGRTIAFLASGLRSIYPPEHETLA 227 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + EQ GAL+SE P PL+ FP+RNR+I+G+S GV+VVEAA RSG+L++ARCA+EQ Sbjct: 228 DEVAEQ-GALLSESPPLAKPLSGAFPQRNRLITGMSLGVIVVEAATRSGALISARCAMEQ 286 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I N + G H L+K GA LV +++LE L + ++P + Sbjct: 287 GREVFAIPGRIDNANARGCHRLLKDGAKLVESIDDVLEELGPLTRPAKTEDGKTIHAPIE 346 Query: 304 QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + ++ + D T +D V R+G P+ V++ + LE+ + + G V+ Sbjct: 347 LQLNEMETAIMQALADGQPTDMDSVVSRSGLPIQNVLSTICVLEMRRLVRRLSGVSVQRA 406 >UniRef50_D1N2S1 DNA protecting protein DprA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2S1_9BACT Length = 380 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 116/377 (30%), Positives = 182/377 (48%), Gaps = 14/377 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M+D E + L IS + + + + ++ G+ A + F Sbjct: 1 MLDREACIVLNMISGVGYVKYTALCDEFGSPAGVFRRSARELMHVPGIGETLAVKIAEFD 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + L ++ +I E YP L D P L+V G L + +AVVGS Sbjct: 61 WEGELARELELADKAGVRVITLFDEAYPAVLRNLYDPPLCLYVRGRLPEFPEYAVAVVGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG R R G T+ SGLA G+D VAH ++ G ++AVLG GL IH Sbjct: 121 RRMSDYGARMTRQITAEAVAAGYTVVSGLAYGVDTVAHGMTVEQGGCTVAVLGGGLMRIH 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA ++E GGA++SEFP++ P +FPRRNRI++GL++ +V EA + SG+L+ Sbjct: 181 PQENVPLARRIVETGGAVISEFPMNFPVSRTSFPRRNRIVAGLARLTIVTEAGIGSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI-LVTEPEEILENLQFGLHWLPDAP 294 TAR AL+ GR+VFA+PG NP ++G H LIK+GA L+ ++L + G +LP Sbjct: 241 TARLALDNGRDVFAVPGHADNPQAQGCHQLIKEGAAGLIENFSDVLNAIGVGFGYLPGLA 300 Query: 295 ENSFYSPDQQ--------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 + D D+ E+ + +D++AE G+ +++ L+ LE Sbjct: 301 PGGEANEDAVPYDSSSVGDLPPEAREIWKLLDGRELSLDLLAEETGRETGALLSTLMMLE 360 Query: 347 LAGWIAAVPGGYVRLRR 363 + + R Sbjct: 361 MKLLVEHGSDMVYRRIP 377 >UniRef50_C7GBX1 DNA processing protein DprA n=2 Tax=Roseburia RepID=C7GBX1_9FIRM Length = 361 Score = 346 bits (888), Expect = 7e-94, Method: Composition-based stats. Identities = 101/367 (27%), Positives = 183/367 (49%), Gaps = 12/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M++ W L +I + R+ + + +Q G+ + A + Sbjct: 1 MINYAYW--LSNIPGIGIRTRNRLIGAAGSAREVYGLTEKQLLLIPGVEEKHAAGIMESK 58 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA-LHSFQLAVVGS 115 ++ ++ + + + + + +P +L A D P +L+V+G + ++ +A+VG+ Sbjct: 59 KRDYDTEYESMAEREIFFLSREEQLFPQRLAAIPDAPYSLYVKGTIPQEWNNKTVAIVGA 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG LA + SG+A G+DG H AL+ NG + AVLG G++ + Sbjct: 119 RRCSAYGRSVAEKIAGRLAASDAWVVSGMASGVDGSGHTGALRKNGYTCAVLGCGVDICY 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ ++R+ +LE+ GA++SE+P P A FP RNRII+GL+ V++VEA ++SGSL+ Sbjct: 179 PKSNSRIYQEILEKNGAIISEYPPGTNPSAPLFPARNRIIAGLADVVVIVEAKIKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQG++++A+PG + + SEG + LI+QGA ++++ +E L+ L L Sbjct: 239 TADYALEQGKDIYAVPGRMYDALSEGCNNLIRQGAGIISDVDEFLKEL-----ELQGEIN 293 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + + + + V + ++ G VPE++ L L G+I Sbjct: 294 TGEDNLKNLLLEKDERLVYSCLSLRPKNVGELLQKTGMSVPEMMDILARLLQKGFITETV 353 Query: 356 GGYVRLR 362 Y + Sbjct: 354 KNYYIRK 360 >UniRef50_C9RBU2 DNA protecting protein DprA n=1 Tax=Ammonifex degensii KC4 RepID=C9RBU2_AMMDK Length = 375 Score = 346 bits (888), Expect = 7e-94, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 168/368 (45%), Gaps = 13/368 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFL-SFPRK 58 + +L + + + + + + R A+ + Sbjct: 5 EERPYYLAWQLLLPGQSRRVKGLISFFGSAREAFLASPRHWASVVGERLAEALAGRKAKL 64 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ L + + YP L P ALF GE+ +A+VG+R Sbjct: 65 DLKKEEERLRKSGVRYVTLAEPEYPALLREIDSPPAALFYLGEIRQ-EERAVAIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG LA GVT+ SGLARGID AH+ AL G ++AVLG G + +PR Sbjct: 124 TRYGREVAESLASDLARFGVTVVSGLARGIDAAAHRGALSGGGRTLAVLGTGCDRCYPRE 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ GALVSEFPL ++FP RNRII+GL V+VVEA +SG+L+TA Sbjct: 184 NWNLWREI-ERKGALVSEFPLGTEARPWHFPVRNRIIAGLVHAVIVVEAPEKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALE GREV A+PG + P ++G H L+KQGA LV + E++LE L + + Sbjct: 243 LALEYGREVLAVPGRVTTPQAKGSHLLLKQGAYLVEKAEDVLEVLGWEI--------IGA 294 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + E+++ + ++ + ER PV ++ L LEL G + GG Sbjct: 295 EEEKDLALNPEEEEIVSLLAAGFLSLEELVERGKMPVDACLSLLSMLELKGVVRPGGGGT 354 Query: 359 VRLRRACH 366 L R Sbjct: 355 YLLTRQGE 362 >UniRef50_Q7UEW1 DNA processing chain A n=1 Tax=Rhodopirellula baltica RepID=Q7UEW1_RHOBA Length = 455 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 171/369 (46%), Gaps = 10/369 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRF-LSFP 56 T ++L + L + + I G+ + A + Sbjct: 87 DSTRDLVQLCLLPGLGPRTLTSLMEAFGSARAILNADKNSLASVHGVGPKLAHVIDTASD 146 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 IE W + +++ YP + D P +F G + + +A+VG+R Sbjct: 147 HVDIEDVFAWCAAMDVNILRRGQASYPAAMEELDDAPPLMFCRGSILPRDTISVAIVGTR 206 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + R LA GVTI SGLARG+D AH+AAL+ G +IAVLG GL I+P Sbjct: 207 HATAYGLQQTRRIAMDLARAGVTIVSGLARGVDTAAHRAALEAEGRTIAVLGGGLGKIYP 266 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 ++ LA + E GA++SE+ P FP+RNRII+ L + LV+EA +RSGSL+T Sbjct: 267 AENSPLADKISEH-GAVISEYAPMAQPRGGMFPQRNRIIAALGQATLVIEAPMRSGSLIT 325 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E G V ALPG + + S+G H LI+ GA LV +++LE L + A Sbjct: 326 ARLASELGHSVGALPGQVNSRASQGCHHLIRDGATLVQHADDVLELLGPLSGNVSLATAV 385 Query: 297 SFYSPDQQD----VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + ++LA VG T +D V +G P V + LE+ ++ Sbjct: 386 EGGDVVRDGREMTLNDVERQVLAAVGTSGTAIDEVTLSSGLPASRVNAIVSILEMKRFVR 445 Query: 353 AVPGGYVRL 361 + G YV Sbjct: 446 RLSGQYVSR 454 >UniRef50_D1KCD4 SMF protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KCD4_9GAMM Length = 362 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 128/364 (35%), Positives = 188/364 (51%), Gaps = 8/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQA-QRFLSFPR 57 +D WL L+ + + + ++ GL + A + Sbjct: 1 MDLIYWLLLLKAPHVGVRTFYKALKHFETPEQVFLASKSERKECGLFRQAALDYLENQDH 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +++ L W++ + H++ E YP QL +D P L++ G + L Q A+VGSR Sbjct: 61 SVVQADLDWVKSDDCHIVTLIDESYPKQLKTISDPPPLLYIRGSVECLSKTQFAIVGSRN 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G++ F + L+ G+ ITSG+A GID AH AL+V+ +IAV G GL+ I+P Sbjct: 121 PTPGGKQNAYQFSQELSRAGMIITSGMASGIDAQAHIGALEVDCPTIAVCGTGLDRIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +H LA + GALVSEF + P+A NFPRRNRIISGLS G LVVEA+++SG+++TA Sbjct: 181 KHKSLAHQI-SLKGALVSEFCIGTSPIANNFPRRNRIISGLSLGTLVVEASIKSGTMITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 + A +QGREVFA+P I NP S+G H LIKQGA LV +I+E L L + + Sbjct: 240 KLAADQGREVFAIPSSIHNPLSQGCHQLIKQGAKLVDTINDIIEELPI---DLKSSTKPL 296 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S V LL + E +D + E++G + +LL LEL + G Sbjct: 297 NVSNCTNSVDKTPFVLLKYLSYEAMTIDKMVEKSGLSPQVITQELLLLELENRVEKASGS 356 Query: 358 YVRL 361 L Sbjct: 357 AYAL 360 >UniRef50_C6XT86 DNA protecting protein DprA n=2 Tax=Pedobacter RepID=C6XT86_PEDHD Length = 363 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 10/361 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP-RKSIES 62 + L I S+ + I Q G+ A + L+ + E Sbjct: 7 IGLTLIKSVGDVIARNLLDQFGSAEAIFKADKYQLMEISGIGEVVATQILNHDVFEIAEK 66 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L ++++ ++ E YP +L D P L+ +G H +++VG+R + YG Sbjct: 67 QLAFIKKHRIQVLFYTDENYPWRLRNCHDAPVLLYYKGNADLNHFRIISIVGTRRATEYG 126 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R ETLA V I SGLA GID AHK +LQ N ++ VL +GL+ I+P H + Sbjct: 127 RKLCRELAETLAPYRVIIVSGLAYGIDVAAHKESLQQNIPTVGVLAHGLDRIYPALHKPV 186 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A +L GG L +EF D P NFP+RNRII+G++ +VVEA + G+L+TA A Sbjct: 187 AQKMLLNGGLL-TEFLPDTIPDKENFPKRNRIIAGIADATIVVEATTKGGALITADIANS 245 Query: 243 QGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R+V+A PG + S G ++LIK A L++ ++++ L + + ++S Sbjct: 246 YNRDVYAYPGRTNDQYSAGCNFLIKTNRASLISHAKDLIYYLGW---DEIVSEKSSSQLQ 302 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ +++ + +D + ++ ++ LL LE+ G + A+PG + +L Sbjct: 303 LPVGLSDEEQKIVNILTATPIGIDEIGQQLNFSQSKLAMHLLSLEMQGILVALPGKFYKL 362 Query: 362 R 362 Sbjct: 363 N 363 >UniRef50_A6DJX5 SMF family protein involved in DNA uptake n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJX5_9BACT Length = 380 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 119/371 (32%), Positives = 170/371 (45%), Gaps = 15/371 (4%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK-SIESSL 64 L + + ++ K +I ++ G+ R A+ L+ R L Sbjct: 11 LNMLPGVGPRTYNKLVKKFKKSENIFKASRKELLKCPGIGPRVAEEILNHERNYDPREEL 70 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVGSRAHSWYG 122 + +I YP L D P L++ G H L + +A+VG+R + YG Sbjct: 71 ERARLADIKIINRQDPLYPESLRNIYDAPIILYIRGNAHLLKNYDRNIAIVGTRRPTNYG 130 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + + TI SGLA GID AH A+Q+ +IA+LG G+ I+P+ + +L Sbjct: 131 LQMTEALATEASYASWTIISGLAVGIDSKAHHTAVQLKRPTIAILGGGIGKIYPKDNLKL 190 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + + GALVSE+P+ PP FP RNRII+ LS+ VLVVEA L SGSL+TA ALE Sbjct: 191 ARDICDH-GALVSEYPILFPPDRRTFPMRNRIIAALSRSVLVVEAGLNSGSLITANQALE 249 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL-----HWLPDAPENS 297 GR VFALPG + P S G H L+KQGAIL ++I E L + E Sbjct: 250 YGRSVFALPGRVDIPQSRGCHQLLKQGAILTESFKDIYEEFNLELGSNRKSAKKEQTEKQ 309 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + ++ + VD + E + V +V+ LL LE I +PG Sbjct: 310 ENREFDLQLDENERRIMEILKSGELHVDKICELSELNVGQVLATLLGLETHKLIRLLPGK 369 Query: 358 YVRL--RRACH 366 L RR Sbjct: 370 KYELTNRRQYE 380 >UniRef50_Q2SQW9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQW9_HAHCH Length = 389 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 150/382 (39%), Positives = 196/382 (51%), Gaps = 26/382 (6%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----------QQTGLTLRQAQRFLSFP 56 WL L +I SL + +A + S ID L + + Sbjct: 9 WLNLTTIPSLGDSRLALLAQHFEESSQIDDFQLGVSSSLSFSSELWRAIEKVIAHGDRPV 68 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++L W EQP + L YP L D P L+ G +H Q+A+VGSR Sbjct: 69 NAQAANALRWSEQPGNRLFLLPDADYPSLLRLLPDPPAVLYARGRHELIHQPQIAMVGSR 128 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S +G+ R F +L G TITSGLA GIDG AH AL G +I VLG+GLN I+P Sbjct: 129 NPSVHGQETARQFARSLGESGFTITSGLAAGIDGSAHAGALGTLGATIGVLGSGLNVIYP 188 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H LA ++E G LVSEFP D P + +FP+RNRIISGLS G LVVEA+LRSGSL+T Sbjct: 189 AKHRDLAQKMMES-GLLVSEFPPDTQPRSQHFPKRNRIISGLSLGTLVVEASLRSGSLIT 247 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALEQ REVFA+PG I NP + G H LIKQGA LV ++IL L + E Sbjct: 248 ARNALEQHREVFAIPGSIHNPQARGCHHLIKQGAKLVECTDDILAELPALMGLYRSLNEP 307 Query: 297 ---------------SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ +L +G + TP D + ER G + E+ + Sbjct: 308 WTTVFAAEEFPGQQSQPEPASLRPLSEQAEAVLKGMGYDCTPPDALVERTGLSIAEIRSV 367 Query: 342 LLELELAGWIAAVPGGYVRLRR 363 L+ELEL GW+ V GG++R R Sbjct: 368 LIELELEGWVQEVAGGFIRNAR 389 >UniRef50_C7PR97 DNA protecting protein DprA n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR97_CHIPD Length = 378 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 8/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPR 57 + + L I + ++ S + ++ G + + +A F Sbjct: 11 EELRHQIALTQIPQIGDIVAKKLLAHFGSASEVLNASRKELGNIPDIGIVRADAIFQFRD 70 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + + +LE+ N I S YP +L D P L+ +G + + +++VG+R Sbjct: 71 YRKADKEIDFLEKHNIQAIFYTSTAYPKRLHHCADSPVMLYYKGTTNLNAARMVSIVGTR 130 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 YG+ E L + V I SG+A GID +AHK A+Q +I VL +GL+ I+P Sbjct: 131 TPGEYGKNMCAQLVEALTSHNVVIISGMAYGIDIIAHKRAVQQRIPTIGVLAHGLDRIYP 190 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 ++H A +++ GG L +EFP P +FP RNRI++G++ +V+E+ + GS++T Sbjct: 191 QQHRSTAMEMIDNGGLL-TEFPSYTQPDRQHFPMRNRIVAGIADATIVIESGTQGGSMIT 249 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPE 295 A A ++VFA+PG +P + G + LI+ A+L+T + L+ + + P A + Sbjct: 250 ADIANSYNKDVFAIPGRANDPHAAGCNELIRTNKAMLITSATDFLQTMGWHTDNTPSAVK 309 Query: 296 NSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + ++ GD +D + + + P +V + +L+LE+ + ++ Sbjct: 310 FNPQKELFITLDDAEKHIVTLFSGDAEKHIDELRKESHLPGSQVNSLVLKLEMRHVLKSL 369 Query: 355 PGGYVRL 361 PG +L Sbjct: 370 PGQKYQL 376 >UniRef50_B3ETK3 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETK3_AMOA5 Length = 374 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 106/373 (28%), Positives = 170/373 (45%), Gaps = 14/373 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQRFL 53 M + E L L I + + RI I G+ L Q L Sbjct: 1 MHEQEKIYQLALSLIKGIGFNTWKRIIEKFKTAQAIFQASKTSLTGNLPGIPLSIIQAIL 60 Query: 54 SFP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + E + ++ ++ E YP +L LF +G ++ S +++ Sbjct: 61 AKDTLSIAEKLVGAHQKNGIQVLSFFDESYPLRLKHIATPSSFLFCQGNMNFSMSKVISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VG+R + YG+ + F L + + SGLA GID AHK L+ ++ VL GL Sbjct: 121 VGTRKATPYGKSFVEKFIAGLREYEEILVVSGLAYGIDLQAHKMCLRYGLSTVGVLAGGL 180 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P H ++A +L GG LVSE P+ + FP+RNRII+GL+ +VVEA +S Sbjct: 181 DKIYPTAHKKVALDMLADGG-LVSEIPIGSTLETFQFPQRNRIIAGLADATVVVEADYKS 239 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 G+++TA A REVFA+PG I S G + LIK Q A L+T +++ + + Sbjct: 240 GAIITANFANAYNREVFAVPGNIDATYSAGCNHLIKTQQAHLLTSTDDLAYIMNWQKCSQ 299 Query: 291 PDAPENSFYSPD--QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELA 348 P+ NS V ++L + E +D ++++ +V + LL+LEL Sbjct: 300 PNNLINSHKEKLVGLSQVEQEIVQVLKLLQKEA-YIDEISQQIQLSPSQVSSMLLQLELK 358 Query: 349 GWIAAVPGGYVRL 361 + +PG +L Sbjct: 359 NIVECLPGNKFKL 371 >UniRef50_UPI0001BC300C DNA processing protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC300C Length = 360 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 108/366 (29%), Positives = 167/366 (45%), Gaps = 14/366 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP- 56 +D + W + ++ + + + + + + ++ LT + R +S Sbjct: 1 MDRKYWYWINNLEGIGNVKIRTLLS-LGTPEELYNMERKEFECLPVLTGKDIDRIVSKDI 59 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 R++I + N + D E YP +L D P L+ +G L +A+VGSR Sbjct: 60 RQNIFEKYQKDMENNVRFVFPDEEDYPCRLKELYDKPYILYYKGRLPRNDVRSVAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG R L+ G I SGLA GID AHK AL G + VL G+ +P Sbjct: 120 RCSEYGRYAAREIAGILSEAGACIISGLAAGIDSEAHKGALYKGGYTCGVLAGGVEKCYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + +GG ++SE+P + FP RNRIISGLS V+VVEA RSGSL+T Sbjct: 180 AGNFNLYMDIQNRGG-IISEYPGESITTPGMFPLRNRIISGLSDYVIVVEAGFRSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R V+A+PG I + S+G + LI GA++VT+ E + L + +N Sbjct: 239 AGTALEQNRTVYAVPGRITDVSSKGCNRLIADGAMVVTDFESLPGELGLSIPNYEKNIKN 298 Query: 297 SFYSPDQQDVALPFPELLA-NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +A L + + ++ + +G EV+ L LE+ G I + Sbjct: 299 DIV------LARDEKMLYSLLLDFTPKSLETLVNDSGMSPAEVLRSLTCLEIKGIIREIS 352 Query: 356 GGYVRL 361 + Sbjct: 353 KNFYVR 358 >UniRef50_Q01N67 DNA protecting protein DprA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N67_SOLUE Length = 391 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 124/378 (32%), Positives = 171/378 (45%), Gaps = 23/378 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLS-FPR 57 + WL L + L ++ I + GL+ AQ S Sbjct: 9 EEELHWLALKLVPGLGARTSGKLLDRFRTPQAIFRASRTELEAAGLSGAVAQSVASGCTF 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + Q L+ YP L D P LF G + L + L VVG+R Sbjct: 69 EDAAQQQERMFQSGAVLVTIGDPRYPRPLREIFDPPILLFARGRVDLLQTLALGVVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA G+TI SG+ARGID AHK AL G +IAVLG G++ ++P Sbjct: 129 PTPYGLAVAERLAADLAHAGLTIVSGMARGIDTAAHKGALARGGDTIAVLGCGVDVVYPM 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LAA L G +V+EFP+ NFP RNRIISGLS GVLVVE A SGS +TA Sbjct: 189 ENRKLAAD-LAVKGLIVAEFPMGAVAFPQNFPIRNRIISGLSLGVLVVEGAQYSGSAITA 247 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF------------ 285 + A++QGREVFA PG I + S GP+ LIKQGA LV + +++ L Sbjct: 248 KLAIDQGREVFACPGNITSKLSWGPNLLIKQGARLVQDWNDVVAELPPESRRQLIDRGRR 307 Query: 286 ----GLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERA-GQPVPEVV 339 D + S S ++ L + D +D + E+ E++ Sbjct: 308 RLLGDGSASLDETQASLLSDPAPELGTVSRRTLEVLQVDNSIHLDDLLEKVEDTSPSELI 367 Query: 340 TQLLELELAGWIAAVPGG 357 L ELE+ G + +PG Sbjct: 368 AALFELEMLGLVKQLPGK 385 >UniRef50_C7RIS8 DNA protecting protein DprA n=2 Tax=Proteobacteria RepID=C7RIS8_9PROT Length = 363 Score = 344 bits (882), Expect = 3e-93, Method: Composition-based stats. Identities = 135/362 (37%), Positives = 185/362 (51%), Gaps = 11/362 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSI-ESS 63 WLRL + + G+ ++ I G + R A+ L ++ + + Sbjct: 10 WLRLTLVPGVGGESQRKLLKAFGLPEAIFTAGRSALGDVIGDRTARLLLDTDNRAAVDRA 69 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L W N HL+ YP LL D P L+V G L L+ LAVVGSR + G Sbjct: 70 LAWANGTNQHLVCLADPEYPQALLQIPDPPTLLYVRGRLSLLNQPALAVVGSRNPTPQGR 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 F A G+ + SGLA GID AH+ AL G +IA +G G++ I+P + +LA Sbjct: 130 GNAERFAAAFAEAGLGVVSGLALGIDAAAHRGALNATGNTIAFIGTGIDRIYPAANQQLA 189 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + + GA+ SEFPL PP A NFPRRNR+ISG+S+GVLVVEA SGSL+TAR A EQ Sbjct: 190 FDIAAR-GAIASEFPLATPPAAANFPRRNRLISGISRGVLVVEATTESGSLITARLAAEQ 248 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 GREVFA+PG I +P S G H LIKQGA L +++E + + A + Sbjct: 249 GREVFAIPGSIHSPQSRGCHRLIKQGAKLAEAVADVIEEIGW-------ASAPADRPASA 301 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 A LL +G + +D + +R+G V LL LEL G +A +PGG+ + Sbjct: 302 TADAAEAGSLLLAMGFDPCSLDELTQRSGLTADAVSVILLHLELDGQVACLPGGHYQRIS 361 Query: 364 AC 365 Sbjct: 362 QA 363 >UniRef50_B5EJ81 DNA protecting protein DprA n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ81_ACIF5 Length = 365 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 137/368 (37%), Positives = 184/368 (50%), Gaps = 9/368 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPR 57 M D WL L I+ L + LQ GL Q P Sbjct: 1 MTDR-AWLALGRIAGLGPIRQRALLERFGAVDRCFQTGAGALQGLGLQAAQIAALQKAPE 59 Query: 58 KSIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + WLE P+ L YPP L +D P L++ G+ L+ LA+VGSR Sbjct: 60 DVLTPADRRWLESPDTDLCRWTDSDYPPLLRHISDPPLLLYLRGQRACLNQAMLAIVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F L G+ I+SGLA GID AH+ AL ++AVLG G + I+P Sbjct: 120 SPTASGVATAEAFARNLGEAGLIISSGLALGIDAAAHRGALNSG--TVAVLGTGADLIYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +LA + G ++SE P D P + FPRRNRIISGLS GVLVVEAA SGSL+T Sbjct: 178 RSHLQLARQI-AGQGLILSEQPPDTGPRSGLFPRRNRIISGLSLGVLVVEAAEGSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A++QGREVFA+PG I +P S GPH LI+ GA LV E++L L L +A + Sbjct: 237 ARLAMDQGREVFAIPGSIHSPLSRGPHRLIRDGAKLVESAEDVLSELGPLYAVLRNA-QA 295 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + D Q + A + + + +A R G + E+ LL++EL G++AA PG Sbjct: 296 MAPAADWQPEDPAQARVWAAMDFDPLAPEQIANRCGLTLTELSAILLDMELQGYLAACPG 355 Query: 357 GYVRLRRA 364 G Sbjct: 356 GRFCRLPP 363 >UniRef50_Q0AYP6 Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYP6_SYNWW Length = 362 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 187/362 (51%), Gaps = 8/362 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLSFPRKS 59 + L +I + + +I + + L AQ +S + S Sbjct: 4 TEKAALCFLHAIKGIGSKSLWKIKDSFGSFENCLKSDSSRLYALLKSEIAQAIISQRQNS 63 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 I L LE + + + YP L + P L+ +G + + LAVVGSRA Sbjct: 64 SIFFYLERLENEGINPMGFEESAYPSSLRNIYNPPMLLYFQGNMDCVKKICLAVVGSRAA 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG R LATRG+++ SG+ARGID AH+ L G +IAVLG+GLN I+PR Sbjct: 124 SDYGRTTARKLGHQLATRGISVVSGMARGIDTEAHRGTLDARGKTIAVLGSGLNIIYPRS 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + RL ++EQ G ++SEFPLD P NFP RNRIISG+S+GV+VVEA ++SG+L+TA Sbjct: 184 NKRLFHEIIEQ-GVVISEFPLDTNPEPGNFPMRNRIISGISRGVVVVEARVKSGALITAD 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGR+VFA+PGPI S G + LIKQGA L+T E+I+E + + Sbjct: 243 YALEQGRDVFAVPGPINRESSMGANNLIKQGAKLITGVEDIIEEYY----DITIPEKELP 298 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + ++ + + D + G + E+ LL+LELAG + ++PG Y Sbjct: 299 LQEQLLFLDEQEKVVVNCLAGDPLLFDDIIASTGFNIGELSRLLLKLELAGIVKSLPGNY 358 Query: 359 VR 360 Sbjct: 359 YV 360 >UniRef50_C8X184 DNA protecting protein DprA n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X184_DESRD Length = 395 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 170/380 (44%), Gaps = 15/380 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF----PR 57 + L L L R+ A + Q +F Sbjct: 14 EELWACLALRYTPGLGPKTQRRLFDAYGSARRAVADAAHWGQWDWMRPQAVAAFTSRKWE 73 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + ++ + YP +L P ++ G+ LH+ +A+VGSR Sbjct: 74 QEARREWDAARRQEMRVVLWSEDQYPVRLREIEAAPPFVYAYGDTSLLHAPCVAMVGSRQ 133 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG++ R LA G+T+ SG A+GID AH AL G S+AV+G GL+ ++P Sbjct: 134 CSRYGKKVARALAADLAQAGITVVSGFAQGIDSHAHTGALNGVGSSVAVMGTGLDIVYPA 193 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R +L + G L+SEF PP NFPRRNRIISGLS V+VVEAAL+SGSL+TA Sbjct: 194 RQHQLWQEVAAH-GCLISEFAPGTPPEPKNFPRRNRIISGLSLAVVVVEAALQSGSLITA 252 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH--------- 288 + ALEQ REVF +PG + G G H L++ GA LV E+I+++L + Sbjct: 253 QLALEQDREVFVVPGSVLESGFAGGHALLRDGARLVRNAEDIVQDLGPMVSVTSPRPGAL 312 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELEL 347 L + S + + ++A + +E VDV + LL LE+ Sbjct: 313 PLDPPQDRSASELTWRGGSALENAVVARLSEEDRVHVDVFLRELADSSQAINHALLMLEM 372 Query: 348 AGWIAAVPGGYVRLRRACHV 367 + +PG Y L V Sbjct: 373 QEVVEKLPGMYYALAPGVRV 392 >UniRef50_C0EVN1 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVN1_9FIRM Length = 373 Score = 343 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 109/373 (29%), Positives = 175/373 (46%), Gaps = 12/373 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG---LTLRQAQRFLSFP 56 M + + W +I+ + ++ S I + T + + S Sbjct: 1 MTNNDFYWYWFTNIAGIGVKTQKKLLEHFGHPSTIYNAPESEIKGILTTGQCKEVIASKN 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +K IE+S+ LE+ + +S+ YP +L + P L+ G L LA+VG+R Sbjct: 61 QKKIEASIRKLEKREIYFFHRESQEYPERLAQLYEPPNLLYYIGRLPNFSKPILAIVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + R F + LA G+ I SG+A G+D HK AL NG ++ VLG G++TI+P Sbjct: 121 RATIYGRKMAREFAKRLAECGIQIVSGMAAGVDAAGHKGALDANGYTLGVLGGGIDTIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + + GG ++SE+ + + P FP RNRIISGLS G+ V EA RSGSL+T Sbjct: 181 VENFNLYQQVYQMGG-VLSEYNMGISPQKGLFPMRNRIISGLSDGIFVTEAGARSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A LEQG+++FALPG I + S G + LI QGA+LV PE+I++ + Sbjct: 240 ADQGLEQGKDIFALPGRITDCMSRGCNDLISQGAVLVRSPEDIMDIIIKEGKTGNKKKNM 299 Query: 297 SFYSPDQQD------VALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ + + + + + E +G E+ L++ EL Sbjct: 300 DVNREKFFKEQKFFCENKKEEKVYSLLDEIHPMTFENLLENSGFSAFELQHILMKFELKN 359 Query: 350 WIAAVPGGYVRLR 362 I + + Sbjct: 360 IIYQIEQNVYLRK 372 >UniRef50_A7VXH4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH4_9CLOT Length = 396 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 120/393 (30%), Positives = 170/393 (43%), Gaps = 33/393 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M W+ L + RI + L + + Sbjct: 1 MNRELFWIWLSLGLTPGSRSCKRILERFRTPEEFFRAPDDQWRSFRLPAGELSALSTRDL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 E + LI + YP +L + P L+ +G L L LA VG+R Sbjct: 61 VQAEKISVACREKGIDLIAPGDQAYPNRLWEIPNPPALLYCQGVLPDLEEALCLAAVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G + C LA G I SG A G D A + ALQ G +IAVLG G + +P Sbjct: 121 SATEDGMKSAFELCYRLAGAGTVIVSGGALGADQAALEGALQAKGKTIAVLGGGADVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 A + +LE GGA++SE+P P NFP RNRIISGLS+GVLV+EA SG+L+T Sbjct: 181 PNFAGMRKRILENGGAVLSEYPPATKPYRGNFPVRNRIISGLSRGVLVIEAPKHSGALIT 240 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQ R+VFALPG + + S G + LIK GA VT PE+ILE + + A ++ Sbjct: 241 AGLALEQNRDVFALPGSVRSEASFGTNQLIKDGAKPVTCPEDILEEYAYTYAYSGSAKKD 300 Query: 297 SFYSPDQQDVALPFP-----------------------------ELLANVGDEVTPVDVV 327 S + + V+ +L + E +D++ Sbjct: 301 EIASTEIEGVSPSGQNPLRPPNHRTELPKAPPAIREEELSACAVKLYQAMSWEPAYLDIL 360 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 AE AG + + + ELEL+G I + G Sbjct: 361 AEEAGLSAAQALQAVTELELSGIIQSYSGRRYA 393 >UniRef50_B7JXG9 DNA protecting protein DprA n=6 Tax=Cyanobacteria RepID=B7JXG9_CYAP8 Length = 375 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 15/376 (3%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS- 54 M + WL IS + + R+ V G + L+ + L Sbjct: 1 MNQERAYWLAWSQISGVGPVLLKRLEQQFGSLQTAWMVSKSALGEVEGIGLKSLPKILEQ 60 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQL 110 + + L Q N + YP L P L+ +G+++ L + + Sbjct: 61 RSQINPLQFLEEHSQKNPNFWTPADADYPHLLKEIASPPAVLYYQGQVNLLENQGITPAI 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +VG+R + +G RW + L G T+ SG+A GIDGVAH++ L+ G ++AVLG G Sbjct: 121 GIVGTRYPTEHGRRWTYSITKALVKHGFTVVSGMAAGIDGVAHESCLEAGGRTLAVLGTG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ ++P H +L ++ +Q G ++SE+P P +FP RNRII+GLS+ VLV+EA + Sbjct: 181 VDMVYPSNHRQLHRNI-QQQGLILSEYPAGTPGDRGHFPARNRIIAGLSRAVLVMEAPEK 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SG+L+TAR A E GR+V+ LP + G LI QGA ++ E+LE L H Sbjct: 240 SGALITARYANEFGRDVYTLPNSPDVEQARGCLRLIHQGAEMIVTEGELLEMLGAIPHLD 299 Query: 291 PDAPE----NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 A + ++ + ++A ++ + E T DV+ + G EV LL+LE Sbjct: 300 QTAKQLSLFDAPIAKPLPNLAPELLKIFQAIKTEETSFDVIVQTTGLSPGEVSGGLLQLE 359 Query: 347 LAGWIAAVPGGYVRLR 362 L G + +PG + + Sbjct: 360 LEGLVNQLPGMRYQRQ 375 >UniRef50_C6L9V3 DNA processing protein DprA n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9V3_9FIRM Length = 367 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 114/365 (31%), Positives = 176/365 (48%), Gaps = 13/365 (3%) Query: 2 VDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL----QQTGLTLRQAQRFLSFP 56 E+ W L SI LY D ++ K + + L+ ++ Sbjct: 7 EKRELEWFWLCSIPGLYEADRKKLLAVWDKPGRVYDAARGREQKIPVLSEKKMDAVRRHW 66 Query: 57 R-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ I ++ YP QLL DYP LF G + + +AVVG+ Sbjct: 67 ELARAQQEYHKWQRKGIQFISCENPAYPQQLLQIVDYPSGLFCRGRMVSQEETCVAVVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R ++ G E LA G+++ SG+A GID A +A L G S A+ G G++ + Sbjct: 127 RMCTYNGRNTAESLAERLAENGISVVSGMAYGIDARAQEACLNAGGKSYAIPGCGVDICY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + RL +L++ GG ++SEF PLA++FP RNRIISGLSK V+VVEA +SG+L+ Sbjct: 187 PRENRRLYEALIQSGG-VISEFYPGTAPLAFHFPMRNRIISGLSKIVVVVEARKKSGTLI 245 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALEQGR+V+A PG + + S G + LI+ GA ++T+ +E LE F L Sbjct: 246 TAELALEQGRDVYAFPGRMQDALSAGCNRLIQDGAGMITDIDEFLETNGFLLKRAAKEKN 305 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +A + + + + + +AE PV +V+ L LEL G ++ Sbjct: 306 SKMV------LASSEKLVYSCLDSDAKNLQTLAEETDIPVWQVMGALSALELKGLVSESG 359 Query: 356 GGYVR 360 Sbjct: 360 KNNYV 364 >UniRef50_B0N9B3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0N9B3_EUBSP Length = 365 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 13/365 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP-RK 58 E WL SI L + + + + + L + + K Sbjct: 9 YEYWLA--SIKPLQPKKKRMLRENLGSGRTVYYIEETKLHFQEYLNAKDVETIRKAQGDK 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 IE L++ N IP S YP +L + P AL+V+G L S A+VG+R Sbjct: 67 KIEERWARLKEENIRFIPYFSREYPEKLKHIPNPPYALYVKGSLPKEDSPSAAIVGARRC 126 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YGE+ + E LA GV + SG+ARGIDG + AL G + +LG G++ +PR Sbjct: 127 TPYGEQMALAYGEKLAKAGVQVISGMARGIDGAGQRGALNGRGRTYGILGCGVDVCYPRE 186 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L L E GG L+SE PPL FP RNRIISGLS VL++EA RSGSL+TA Sbjct: 187 HIGLYMDLQENGG-LISEQIPGQPPLPAYFPERNRIISGLSDVVLIIEAKERSGSLITAD 245 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V+ALPGP+ +P S+G H LIKQGA ++ PE++L L+ + Sbjct: 246 MALEQGKDVYALPGPVTSPASQGCHRLIKQGAGILLSPEDLLMELEIS-----NMNPGQN 300 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +++ + P + + +G + + E G E++ +L+ LEL G+I V Y Sbjct: 301 SDENKKMLESPENMVYSCLGLFPKSIGQLLEETGLCPKELLERLITLELEGYIKEVSKNY 360 Query: 359 VRLRR 363 R Sbjct: 361 YIRIR 365 >UniRef50_A9KNG7 DNA protecting protein DprA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNG7_CLOPH Length = 369 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 106/369 (28%), Positives = 176/369 (47%), Gaps = 10/369 (2%) Query: 1 MV----DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRF- 52 M + +W + + +V + + + ++ GL Sbjct: 1 MDCIKRNRLLWYWISKNEVIGHKTIVMLLYAFHSIEGVYQAKQEELLKLGLKEEVISYLN 60 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + + +E+ + ++ H I + + YP +L D P L+ GEL +AV Sbjct: 61 KKYSMEELENEYNYTKKRGIHFICIEDKEYPEKLKKLYDAPWFLYYRGELPKDDLPSIAV 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +G+R S YG F + L+ G+ I SGLARG+DG+AH AL G + V+GNGL+ Sbjct: 121 IGARNCSAYGSDAAYYFSKELSLFGIQIISGLARGVDGMAHSGALSCGGKTYGVIGNGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + L + GG ++SE+P+ L Y+FP RNRII+ LS G+LVVEA +SG Sbjct: 181 LCYPRENYGLYQEVNLHGG-ILSEYPIGSKALPYHFPLRNRIIAALSDGILVVEAREKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+T LEQG+++FALPG + + S+G + LI+ GA LV PE+IL L+ L Sbjct: 240 TLITVDSGLEQGKDIFALPGKLTDVLSKGCNLLIQSGAKLVLSPEDILVELRNQYSSLLG 299 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 S ++ + + + + E V+ + + +++ L ELE ++ Sbjct: 300 VTTREINST-KEGLTEVEQLVYSFLSHEAIHVEELLMKTNLNQGQLLEVLFELESKQYVR 358 Query: 353 AVPGGYVRL 361 + G Sbjct: 359 MISGQQYVR 367 >UniRef50_Q0AIZ9 DNA protecting protein DprA n=4 Tax=Betaproteobacteria RepID=Q0AIZ9_NITEC Length = 373 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 132/369 (35%), Positives = 185/369 (50%), Gaps = 9/369 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSF--PRK 58 D E WLRL + + R+ + + A + + A Sbjct: 6 DIESWLRLGLTEGVGSGSLRRLLVAFGDPAEVLAANQRALEGVVKKTVATSIFQRKVDED 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ WL+ P + LI YP LL D P L+ +G+ L LA+VGSR Sbjct: 66 KFAKTIEWLQDPLNSLITLADPDYPGLLLNIPDPPPILYFKGQRKFLARPALAIVGSRNA 125 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + G F E + G + SGLA+GID AH+ L+ S+A++G GL+ ++P + Sbjct: 126 TPQGFANADAFAEAASNAGFCVISGLAQGIDTAAHQGGLRGASSSMAIVGTGLDLVYPSK 185 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + LA L ++ GAL+SEFPL VP ++ NFPRRNRIISG+ LVVEA L SGSL+TAR Sbjct: 186 NRELAHKLADE-GALISEFPLGVPAMSKNFPRRNRIISGMCHACLVVEATLYSGSLITAR 244 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF----GLHWLPDAP 294 ALEQGR+V A+PG I +P S+G H LIKQGA LV ++IL+ L + P Sbjct: 245 LALEQGRDVMAIPGSIHSPLSKGCHALIKQGAKLVENIQDILDELNHQPIQQIEAAPVNH 304 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + D + LL + +D + R+G V V LL LEL G I ++ Sbjct: 305 NETGGLVDASSDCIDDTGLLIYFDYDSIDIDTLCIRSGLTVEAVSAMLLILELEGKIGSL 364 Query: 355 PGGYVRLRR 363 PGG + R Sbjct: 365 PGGRYQRVR 373 >UniRef50_B1ZNA2 DNA protecting protein DprA n=3 Tax=Verrucomicrobia RepID=B1ZNA2_OPITP Length = 382 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 100/374 (26%), Positives = 163/374 (43%), Gaps = 18/374 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVA-KQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 + + L L ++ ++ + R+ + A ++ G+ + ++ Sbjct: 7 TERQALLVLNALPNIGPVTLNRLLAELGGDPRAALAASAKRMEAVRGVGPVISATLTNWR 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + I YP L D P L+ +G + +A+VGS Sbjct: 67 EHFDLAREEERMAKSGADFITTGDAGYPKLLKEIHDPPIGLYRKGR-YGFEQPCIAIVGS 125 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG+ + LA G + SGLARGID AH+ AL V G + AV+G G++ I+ Sbjct: 126 RRTTLYGQATAKKLGAELARLGFCVVSGLARGIDTAAHEGALSVGGKTAAVVGCGIDIIY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L + E GA++SEFP +FP RNR+++G+ + V+VVE + G+++ Sbjct: 186 PPENLALYRQI-EATGAVLSEFPFGRRADRQSFPMRNRVVAGMCEAVIVVETDVNGGAMI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A E GR +FA+PG I P S G H LI+ GA L+T +++L L + P A Sbjct: 245 TARFAGEYGRLIFAVPGRIDQPTSAGCHQLIRDGATLLTSVDDVLNELSYLGGLRPAAIP 304 Query: 296 NSFYSPDQQD---------VALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLEL 345 S D + + + D + + P+V L+ L Sbjct: 305 PKEGSADPESALGVTPSTALTPEEAAIWECFRGGAMLTPDAIIAQTRLGSPQVSAALMML 364 Query: 346 ELAGWIAAVPGGYV 359 EL IA G Sbjct: 365 ELKRLIAKRSDGAF 378 >UniRef50_B3QQG8 DNA protecting protein DprA n=6 Tax=Chlorobiaceae RepID=B3QQG8_CHLP8 Length = 387 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 120/374 (32%), Positives = 183/374 (48%), Gaps = 15/374 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQ---------RFLS 54 L L + + + S + + G+ A+ + + Sbjct: 15 LMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRN 74 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + + E + + N ++ YP L D P ALFV G + AL + LAVVG Sbjct: 75 KAKLAAEEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVG 134 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ C L + G+TITSG+A GID AH A+Q GV+IAVLG G++TI Sbjct: 135 TRKATSYGKQATEHLCRDLVSMGLTITSGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTI 194 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + RL +LE GGA+V+E L P+ NFPRRNR+I+G++ G LVVE+ ++ GS+ Sbjct: 195 YTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTLGTLVVESDIKGGSM 254 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 +TA ALEQ REVFA+PG I S GP+ LI + A ++IL L +LP A Sbjct: 255 ITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPPAA-FLPTA 313 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 P + ++ + E +D++AE+ G P+ +++ L ELE+ + Sbjct: 314 GRQDVDKPSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQ 373 Query: 354 VPGGYVRLRRACHV 367 PG +R Sbjct: 374 EPGQLFSIRPPERR 387 >UniRef50_C6IVU7 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVU7_9BACL Length = 373 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 177/364 (48%), Gaps = 8/364 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA---VVLQQTGLTLRQAQRFL-SFPR 57 + L + + +I + H ++ GL + R F R Sbjct: 13 EKKWVLAGLHEFPGVGWKTLQQIVAYDEDWEHAIEFTAADWRERGLGPELSLRLSERFTR 72 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 IE+ L + +I YP + T P L+ G+ L+ +A+VG+R Sbjct: 73 DWIEAQLEQYDGKGIQVITRLDLEYPILMKETAQPPWVLYALGDTRLLNGLSVAMVGTRT 132 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + G L G+TI SG+ARGIDGV H+AALQ G +IAVLG ++ +P Sbjct: 133 PTAYGRKVGAALAGELCALGITIVSGMARGIDGVCHEAALQAGGTTIAVLGTAIDVAYPP 192 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H + + EQ G ++SE+P+ P FP+RNRII+G++ G +VVEA RSGSL+TA Sbjct: 193 EHVSMYRRIAEQ-GLVISEYPIGTPGHPGMFPQRNRIIAGIAHGTVVVEADARSGSLITA 251 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 ALE+ R++FA+PGPI +P S G WL+KQGA +VTE ++I E+ + L + + + Sbjct: 252 DKALEENRDLFAVPGPITSPKSRGTLWLLKQGAKIVTEAKDIWEDYEAFLPAAKETKKEA 311 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + + +T D + + G + + LL L + +PG Sbjct: 312 VTGN---KLTDEERRIYHMLEQGITSFDDLLVQTGWDFGLLHSVLLSLIMKKTAVQLPGS 368 Query: 358 YVRL 361 +L Sbjct: 369 VYQL 372 >UniRef50_C6VX12 DNA protecting protein DprA n=2 Tax=Flexibacteraceae RepID=C6VX12_DYAFD Length = 372 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 9/364 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFP-R 57 + L LM + + ++ + S + +++ G+ + + L+ Sbjct: 8 EKICILALMHTPGIGAVTIRQLISYCGSASQVFESDYRKLIKIPGIGDKIVKAILNKSTL 67 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + E + ++ L+ YP +L D P AL+ +G + + +VG+R Sbjct: 68 EYAEKEVVQCQKTATQLLFFTDPDYPARLRPLYDAPIALYAKGNTNFNWPRTVGIVGTRK 127 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG+ L + SGLA G+D AH+ ++ N ++ V+ +G + I+P Sbjct: 128 ISEYGKAVTEQIIRDLVPYQPLVVSGLAYGVDITAHRHCIRNNLATLGVMASGADVIYPA 187 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H R AA + GG +V+E L P FP RNRII+GLS +VVE+ GSL+T Sbjct: 188 VHQRTAADMQANGG-IVTENALGTKPDFMRFPARNRIIAGLSDVTIVVESGRTGGSLITV 246 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPEN 296 A REVFA+PG I P SEG ++LI+ A + T ++ E L + P++ Sbjct: 247 EFAQNYHREVFAVPGMINEPQSEGCNYLIRDNKAAIFTSVTDMAEALGWTAGM-PESVPA 305 Query: 297 SFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + ++LA + T +D +A + G + + + LL LE G + ++P Sbjct: 306 EAQPVSFEGFTQDEGQVLALLKQHGPTQIDELAWQTGIHLNRLASLLLNLEFQGMVRSMP 365 Query: 356 GGYV 359 G Sbjct: 366 GKKY 369 >UniRef50_B4S293 DNA protecting protein DprA n=2 Tax=Alteromonas macleodii RepID=B4S293_ALTMD Length = 369 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 196/358 (54%), Gaps = 5/358 (1%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 W+ L S + ++ ++ Q + L +K I+++L Sbjct: 14 AWIALASAQRVSPKLWLQALEQHQCSP--IELLSQASSLGSTVTTLTDQITQKHIDTALN 71 Query: 66 WLE-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W + N H+I DS YPP L P LF G L Q+A+VGSR S G+R Sbjct: 72 WAKVSENRHVITLDSPDYPPLLKQLDSPPLVLFATGSKALLKQPQIAIVGSRRASIQGKR 131 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 F L+ G+ ITSGLA GID AH A+ + +IAV+G G + I+P ++++L Sbjct: 132 IATDFAMGLSNNGIAITSGLAMGIDSAAHVGAISGSIGTIAVMGTGPDKIYPAKNSKLYN 191 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + GG V+EF P ++FPRRNRII+ LS G LVVEA ++SG+L+TA A + G Sbjct: 192 EIHDSGGVSVTEFFPGQGPKPWHFPRRNRIIAALSLGTLVVEAKIKSGTLITANLAADMG 251 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 R+VFA+PG + + SEG HWLI+QGA LVT +IL L+ G+ + + + Sbjct: 252 RDVFAVPGSLFHAYSEGCHWLIQQGAKLVTNVNDIL--LEIGVQPQQMSFDVGEQNEKSA 309 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +L +LLA+V ++T +DV+A+R V + + LLE EL G +AAVPGGYV+LR Sbjct: 310 VNSLATDKLLASVEYDITAIDVIAQRNALSVSQAMASLLEYELRGLVAAVPGGYVKLR 367 >UniRef50_UPI0000E0DBE1 putative DNA processing protein DprA n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE1 Length = 370 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 203/370 (54%), Gaps = 9/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVA----KQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M + L+ + + ++++ + L GL+ Q ++ + Sbjct: 1 MEKLVAFYALIHCQGVSTNTVLKLTTHFQCDIADIPTLSKETLAAQGLSSAQIEQLKADY 60 Query: 57 RKSIESSLCWLEQPNH---HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + I+ + WL+ + +I D YP L D P LFVEG + L QLA+V Sbjct: 61 KIPIQRIMNWLDHDSDCPRQVIYCDDADYPQYLAHLHDRPLLLFVEGNISLLTLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + +G+R+ F + LA+ ITSGLA+GID AH+ AL NG ++AVLG+G Sbjct: 121 GARRATEHGKRYAFDFAKQLASHHWVITSGLAQGIDAQAHRGALAANGATVAVLGHGHEH 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR HA L +L Q G ++SEF D P NFPRRNRIISGL G LVVEA +SGS Sbjct: 181 MYPRHHAHLRQQILSQQGCIISEFFPDQPAQPKNFPRRNRIISGLGAGTLVVEAKRQSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA A+++ R VFALPG I + G LIK+GA+LV E ++I + Sbjct: 241 LITANQAVQENRLVFALPGRIDDENISGCLALIKEGAVLVQEIDDIESEMMEVEKPRHHP 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 S + +++++ LL +VG E+T ++ +A + P+P+V+ QLLE EL+G +AA Sbjct: 301 IYFSTKNKTEENLSPSN--LLDSVGYEITAIENIAAHSSLPLPQVLAQLLEFELSGKVAA 358 Query: 354 VPGGYVRLRR 363 V GGYV+LR Sbjct: 359 VAGGYVKLRS 368 >UniRef50_B3ELQ1 DNA protecting protein DprA n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELQ1_CHLPB Length = 382 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 121/367 (32%), Positives = 180/367 (49%), Gaps = 18/367 (4%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF------- 55 L L + L + + + I + G+ + A+ F Sbjct: 16 LLVLSRVPGLGPARIRALKRQFGTSNAIFHADERALAVIPGIGRKLARTITDFFRSPRNL 75 Query: 56 --PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 RKS E L L++ N L+ D YPP L D P LFV G++ A HS L+VV Sbjct: 76 DLARKSAERQLALLDRYNATLVTIDEASYPPLLKEIYDPPPYLFVRGDIQAAHSPCLSVV 135 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + C L T+G TI SG A GID AHKA L G +IA+L G++ Sbjct: 136 GTRQATLYGRKAVEHICRGLVTKGFTIVSGFAYGIDMAAHKATLDNGGKTIAILAGGVDN 195 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 H ++ ++E+ GA++SE L+ FP+RNR+ISG+SKG ++VE+ R GS Sbjct: 196 PHTDPAGKVWPRIIEE-GAILSEEWLESTISPSKFPKRNRLISGISKGTVIVESKSRGGS 254 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPD 292 L+TA AL+Q REVF++PG I + S GP+ LI K A LV E+I+ L + Sbjct: 255 LITASYALDQNREVFSVPGSIFSTTSAGPNALIEKSQAKLVNGAEDIIAEL---CSYPAT 311 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + +P + + +L + +E +D++AE+ G E++ L E+EL I Sbjct: 312 PEKTIPDTPVRVPLTPEETIILDHFSEEPLHIDMLAEKTGIEPSELLVHLFEMELKNLIE 371 Query: 353 AVPGGYV 359 PG Sbjct: 372 QQPGQMF 378 >UniRef50_B0P1H0 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H0_9CLOT Length = 360 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 110/365 (30%), Positives = 171/365 (46%), Gaps = 9/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR---FLSFPR 57 M D W L L + + + + + Q + S Sbjct: 1 MEDKLYWYWLCGKVRLPIKKQKELMDIFIHPKELYKINPEILKEHMTQLEYDRFVHSRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +I+ L + N I YP +L D P +F +G+ + +A+VGSR Sbjct: 61 TAIKKGYEALHRENIRFIIQKEAAYPNRLRKIYDAPYGIFQKGQPYEEKELSIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + F + LA +GV I SGLARG+DG H+ + G ++ VLG G++ I+P+ Sbjct: 121 PTTYGFEISKKFAKELAQQGVQIVSGLARGVDGTVHREIIDKKGQAVGVLGCGIDLIYPK 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +L + ++SE+P PL ++FP RNRIISGLS G+LV EA RSGSL+TA Sbjct: 181 ENFQLFYDMYANQ-TVISEYPPGSEPLKWHFPERNRIISGLSDGILVTEARARSGSLITA 239 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C L+Q +EVFA+PG I + +G H LIKQGA LV ++IL + P++S Sbjct: 240 DCGLDQNKEVFAVPGMITDKHCQGCHGLIKQGAKLVENVDDILTEFSEFTGFSRKFPKHS 299 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S +A + + + +D + + EV+ L +LE G+I + Sbjct: 300 AKS-----LAKAEKRVYDMLSLKPKYIDEILSTSQDSYEEVIQALFQLEAKGYIKQIHQN 354 Query: 358 YVRLR 362 + Sbjct: 355 LYIKK 359 >UniRef50_B2I112 Predicted Rossmann fold nucleotide-binding protein n=16 Tax=Acinetobacter RepID=B2I112_ACIBC Length = 376 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 183/354 (51%), Gaps = 10/354 (2%) Query: 19 DDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSF----PRKSIESSLCWLEQP 70 +I + GL +R F + E + + Q Sbjct: 24 VSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQSQAQFEQLVQQVRQH 83 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 ++ D YP QLL TD+P +F +G+ AL Q+A+VGSR S +G + F Sbjct: 84 TDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFA 143 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ +G I+SGLA GID AH+ A + +IAV G GL+T +P ++ +LA +L + Sbjct: 144 YYLSEKGFFISSGLAYGIDEAAHQGA-STHQRTIAVTGTGLDTTYPAQNKKLAEHILAKN 202 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA+++EF PPL +FPRRNRI+SGLS GVLVVEA L+SGSL+TA A EQG+ VFA+ Sbjct: 203 GAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEATLKSGSLITANKAAEQGKTVFAI 262 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDAPENSFYSPDQQDVALP 309 PG I + +G H LI++GAIL+ PE+I+E+L + + + ++ Sbjct: 263 PGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIPEH 322 Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 +L ++ +D + PV E+ + L+ELEL G G Y+R R Sbjct: 323 LIDLYQSLDWVGQNIDQLIVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS 376 >UniRef50_A5F4D0 Smf protein n=48 Tax=Vibrionales RepID=A5F4D0_VIBC3 Length = 371 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 160/368 (43%), Positives = 205/368 (55%), Gaps = 7/368 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPRKS 59 D WL L L + + GL Q + K Sbjct: 4 QDLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQWLACGLKPEQLVFLTTQAAKQ 63 Query: 60 IESSLCWLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E L W N+ ++ YP L P LF+EG A+H +A+VGSR Sbjct: 64 AEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGSRNA 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G + R F LA G+ +TSGLA GIDG AH ALQ G ++AVLG+GL ++P++ Sbjct: 124 SVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVYPKQ 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++ Q GALVSEF PP A +FPRRNRIISGLS GV+VVEAA +SGSL+TAR Sbjct: 184 HQGLAERIIAQ-GALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITAR 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL---PDAPE 295 A EQGREVF +PG I N S+G + LI+QGA LV ++I + L+ L W + Sbjct: 243 YAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVPYQ 302 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +S Q D LPFPELLANVG E TP+D++A R PV +++ QLLELEL G + AVP Sbjct: 303 ATLFSAVQSDEELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVVAVP 362 Query: 356 GGYVRLRR 363 GGY+R R Sbjct: 363 GGYIRKGR 370 >UniRef50_C9LSJ1 DNA processing protein DprA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSJ1_9FIRM Length = 370 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 116/367 (31%), Positives = 167/367 (45%), Gaps = 17/367 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRK 58 ++ L S+ + L+ L+ +A F R+ Sbjct: 7 MERFFLAALCRAPSVGSRVAASLVRVFGSAQDAWHARAEALRAAHLSPERAAALHDFCRR 66 Query: 59 S---IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + E E+ L E YP +L + P LF G L L +A+VG+ Sbjct: 67 NEALPEKIAAACEKGGISLFVPSDEVYPARLKEIYNPPQTLFCRGSLDCLKHPAVAMVGA 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG+ LA RG + SG ARGID +HK ALQ G ++AVLG G++ + Sbjct: 127 RHASAYGKGAAEDIALGLAERGFVVVSGAARGIDTASHKGALQA-GATVAVLGCGVDVAY 185 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR +ARL A + E+ GA++SE+ PLA FP RNRIISG++ G +VVEAA RSGSL+ Sbjct: 186 PRENARLLAEIAEK-GAVISEYAPGTAPLAAFFPARNRIISGVAHGTIVVEAAERSGSLI 244 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA AL +GR+VFA+PG I + S G H LI+QGA LV ++ + Sbjct: 245 TAEFALSEGRDVFAVPGSIYSATSRGCHRLIQQGARLVVSAADVAAEY--------EDGA 296 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + Q++ + A + E +D + R V LL L + G + Sbjct: 297 SRTSASPPQELTEEEAAVYALLSREAALSLDELICRLQGKAANVAFLLLGLRVKGLVEET 356 Query: 355 PGGYVRL 361 P Sbjct: 357 PMRTYIR 363 >UniRef50_C5EIV8 Smf family protein n=7 Tax=Clostridiales RepID=C5EIV8_9FIRM Length = 328 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 116/313 (37%), Positives = 170/313 (54%), Gaps = 9/313 (2%) Query: 53 LSFPRKSIE---SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 +K +E L + I YP +L DYP L+V+GEL Sbjct: 18 FDAWKKQLEPMRQEYHTLGEKGIRYITPLDTEYPERLRHIYDYPMGLYVKGELPGDGYPS 77 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 AV+G+R + YG++ LA +GV I SGLA GIDG H+ A++ G + AVLG Sbjct: 78 AAVIGARNCTSYGKQSAEYMGRELAAQGVQIISGLALGIDGAGHEGAVKGRGKTFAVLGC 137 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G+N +PR + RL +LE GG ++SE+P D P A NFP RNRIISGLS +LV+EA Sbjct: 138 GVNICYPRTNYRLFEQILENGG-ILSEYPPDEEPRARNFPARNRIISGLSDVILVMEARQ 196 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 +SGSL+TA+ LEQG+E+FALPG I + SEG ++LI+ GA ++T P ++LE++ Sbjct: 197 KSGSLITAQLGLEQGKEIFALPGRITDALSEGCNYLIRAGAGILTSPVDVLESMGIFYEK 256 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + E + +A + + + E ++ +A + G PV + ++ L ELEL G Sbjct: 257 PMFSYEKADK-----GLAKFEKMVYSCLDSEPRHLEQIAMQTGIPVSQCMSTLCELELGG 311 Query: 350 WIAAVPGGYVRLR 362 + G R Sbjct: 312 FALRTNGQCYIRR 324 >UniRef50_Q0SSB7 DNA protecting protein DprA n=10 Tax=Clostridium perfringens RepID=Q0SSB7_CLOPS Length = 360 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 9/362 (2%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + + L S+ + + V + + + + +I ++ A +F + Sbjct: 1 MKEVDLNYKIWLGSLK-ISNNIKVELLNQLGNEENIYIHRKDIEETGIKCASKFKNDINI 59 Query: 59 SIE-SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + + ++ ++ + YP +L + P LF +G+L +A+VGSR Sbjct: 60 DLNSRVINDINKKDYKIVTYLDKDYPKRLKNIDEPPYILFYKGDLERAEDTNVAIVGSRK 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 YG+R L L GV I SG A G+D AHK ++ N ++AV G G+N +P Sbjct: 120 CDSYGKRCASLIASGLGKAGVGIVSGGAFGVDTEAHKKCVEENFYNVAVFGCGINLDYPV 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L ++ + G ++SEF D PPL YNFP+RNRIISGLS+ V+VV+A +SGSL+TA Sbjct: 180 YNRELYKKII-KNGCIISEFFPDTPPLRYNFPQRNRIISGLSEAVIVVQAGEKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A+ QG++VFA+PG + + S+G + LIK GA + T ++L ++ F + ++ Sbjct: 239 NYAINQGKDVFAVPGDVFSSQSKGCNNLIKDGAGIFTNIGDLLNSIHFKIKKEGKCNKDG 298 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ + LL+ + + + +D + + L EL+ I +PG Sbjct: 299 KK----EENSEINQLLLSILENNILHIDDIIRVTNIDTSIIYELLCELQFENKIEVIPGD 354 Query: 358 YV 359 Y Sbjct: 355 YY 356 >UniRef50_B1KWM8 DNA protecting protein DprA n=13 Tax=Clostridium RepID=B1KWM8_CLOBM Length = 361 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 17/368 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRF----L 53 M++ +W + + + ++ S+I + + + + + Sbjct: 1 MIELNLWYA---SAKVSNNIKTKLLQEFKSVSNIFDYVQNFKYEKNVNINIVKVINNFKI 57 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAV 112 ++ ++ I++ + Q N +I + YP QL D P LF +G + A+ Sbjct: 58 AWNKEKIQNMKNKILQDNIRIINYMEKEYPSQLRNYEDAPAVLFYKGNIEKVNILKSAAI 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR S YG + ++ E LA + I SG+A+GID AH ++ G + A+LG+G++ Sbjct: 118 VGSRKCSIYGMKVTKIISEALADNNIMIVSGMAKGIDYYAHLYCIENRGFTTAILGSGID 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P+++ ++ ++ + G ++SEF PPL+YNFPRRNRIISGLS V+VVEA +SG Sbjct: 178 VVYPKQNKKIY-DIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+T ALEQG++V A+PG I + S G + +IK+GA + T E+IL + + + Sbjct: 237 SLITTEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINN 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 +N ++ + E +D + + + + L EL+L + Sbjct: 297 NKDNKMALK-----DSLQGKVYNVLSHEPKHIDDLLKLMDIDIKHLYEVLFELQLKKEVI 351 Query: 353 AVPGGYVR 360 + G Y Sbjct: 352 CLAGNYYV 359 >UniRef50_Q6MF53 Putative uncharacterized protein dprA n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF53_PARUW Length = 363 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 109/366 (29%), Positives = 181/366 (49%), Gaps = 11/366 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E + L + + + + + + + + Q+ L ++ I Sbjct: 1 MEELEALMILTDMPLIGPVKVRFLVDYFGSAKKALSASITELSHLPGFKQKILDQWQEHI 60 Query: 61 ESS-----LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 S L +E+ + HLI YP QL D+P L+++GEL + + ++G+ Sbjct: 61 RSKKHFANLQLVEKFHTHLISFKDPSYPKQLQNIPDHPPLLYLKGELKPQDNQSITIIGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA G TI SGLARGID AH AL+ G ++A++G+GL I+ Sbjct: 121 RQATLYGLEMAKKLSYELAQAGFTIVSGLARGIDTAAHIGALEAGGRTLAIIGSGLANIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+ + LA + + GA++SEF + PP +FP+RNR++SG+S G L++EA +SG+++ Sbjct: 181 PQENHYLADQI-AKKGAVISEFSMSTPPHRSHFPKRNRLVSGMSLGTLLIEAPQKSGAIL 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 T ALEQ + ++ALPG G H LIK AILV E+I++ L P Sbjct: 240 TIENALEQKKHIWALPGRADQVNFRGNHALIKNKKAILVENIEDIVQCLDTFCFTTPIEQ 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ D + LL + E ++ + +RA P+ +V + L+ L L I Sbjct: 300 KHL----DLVHLQQEEIHLLQKLPVEELSIEEIVKRAQLPIQQVNSLLMSLVLKKIIKEF 355 Query: 355 PGGYVR 360 PG + + Sbjct: 356 PGKFYK 361 >UniRef50_C5AYG6 DNA protecting protein DprA n=5 Tax=Rhizobiales RepID=C5AYG6_METEA Length = 397 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 131/392 (33%), Positives = 174/392 (44%), Gaps = 38/392 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ + + + S + LT R +R + + E Sbjct: 7 QRLDWLRLIRTDGIGPRTFRSLINRFGSASAALDALPD---LTKRAGKRAVPPTKVEAER 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + H + YP L AT P + V G+ L +A+VGSR S G Sbjct: 64 EMVAAARLGIHFLAMGEAAYPKALHATDTAPPLIAVRGDPATLLKPSVAIVGSRNASTAG 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + G+ + SGLARGID AHKA L ++AVL G + I+P HA L Sbjct: 124 LAFTERLARGFGEAGLVVVSGLARGIDARAHKATLTTG--TVAVLAGGQDRIYPENHAGL 181 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ GGA+V+E P+ P +FPRRNRIISGLS G +VVEAA RSGSL+TAR ALE Sbjct: 182 VEEIVGAGGAVVAEMPMGWVPRGRDFPRRNRIISGLSLGTVVVEAARRSGSLITARFALE 241 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------------- 288 QGREVFA+PG +P +EG + LI+QGA LV+E E +L L + Sbjct: 242 QGREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLDPLIAGDAPQADGLNDRSE 301 Query: 289 -------------------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAE 329 LP P + + L+A + D +A Sbjct: 302 TWRTPDYWDEIDFDGRAETTLPLLPAAAEPVEAPPEPRDDRERLIACLSPAPVGTDELAR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G V V T LLELEL G I G V L Sbjct: 362 STGLSVRIVQTTLLELELDGQIERHGSGTVSL 393 >UniRef50_Q7MYI3 Smf protein n=2 Tax=Enterobacteriaceae RepID=Q7MYI3_PHOLL Length = 361 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 180/362 (49%), Positives = 226/362 (62%), Gaps = 1/362 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+WLR+ IS L + +A + VL+ +GL+ Q +F + + Sbjct: 1 MEAMEVWLRMKMISHLATERAANVAEKLLYSGSRYLTVLKDSGLSPEQCLQFTKVNKTLL 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 S L WLEQP HHL+ YPP L P LFV G+ L Q+A+VGSR S+ Sbjct: 61 ASCLKWLEQPEHHLLTYSHPSYPPLLKQIHTPPLVLFVAGKPDILLKKQVAMVGSRTASY 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGERWGR+F L + I SGLA GIDG+ H+AAL G ++AVLG+GL I+P RH Sbjct: 121 YGERWGRIFASELVGYELVIASGLAIGIDGICHRAALDSGGKTVAVLGSGLGQIYPHRHG 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA + E+ GALVSEF D PP A NFPRRNRIISGLS V+VVEA SGSL+TARCA Sbjct: 181 LLAKQI-EENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEAGQNSGSLITARCA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 LEQGR+VFALPG +GN SEG HWLIKQGA L T +I+E++ L WL Sbjct: 240 LEQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATNAMDIVEHVYSSLQWLNMERTEEEVK 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 P + LPF ++L NVG EVTPVD++A+R+ P+ EV+T+LLELEL G + V GGYVR Sbjct: 300 PQFEQTELPFTDVLVNVGAEVTPVDIIAQRSSLPITEVMTKLLELELLGKVTVVAGGYVR 359 Query: 361 LR 362 + Sbjct: 360 VN 361 >UniRef50_B5YFC8 DNA processing protein DprA n=2 Tax=Dictyoglomus RepID=B5YFC8_DICT6 Length = 364 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 169/365 (46%), Gaps = 18/365 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT---GLTLRQAQRFLSFPRK 58 D L S L V + + L Q F+ F RK Sbjct: 7 EDKPYIYALSFFSPL-FRRWREWIDVV-SPKDFFLLSESELINLFLGSSLIQEFIIFRRK 64 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 +E LE+ + E +PP L + P L +G+L + +VG+R Sbjct: 65 FDLEREWEKLEENKVKMTTLWEEDFPPLLKEIKNAPLFLLYKGDLK--GDKFIGIVGTRR 122 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG + F + L G + SGLA GID AH+ A++ G + AVLG+ L+ I+P Sbjct: 123 PSSYGIKMAEAFSKELVKYGFIVVSGLAYGIDTYAHRGAIEGGGKTFAVLGSSLDHIYPS 182 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++E GA++SE+PL P Y FP+RNRIISG+ +GVLV+EA +SG+L+TA Sbjct: 183 GNLKLAERIIE-NGAIISEYPLGTKPARYTFPQRNRIISGICQGVLVIEAGEKSGALITA 241 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 A +GR+VFA+PG + + S G + LIK GA +V + +ILE + N Sbjct: 242 SFAANEGRDVFAIPGRLTDERSVGTNKLIKDGAKMVVDVFDILEEYNIAYEIKKERRFN- 300 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + +L+ + E ++ + + + ++ ++ L+ G + PG Sbjct: 301 --------ITPEEKFVLSFLNSEPIFIEDLMKNLNIDLSTLMFIIISLQGKGLVEEYPGL 352 Query: 358 YVRLR 362 + Sbjct: 353 RYARK 357 >UniRef50_B3QVN1 DNA protecting protein DprA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVN1_CHLT3 Length = 386 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 16/369 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSF-------- 55 L L I S+ + + + + + + G + + +F Sbjct: 17 LILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMA 76 Query: 56 -PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +E+ + L+ YP L P LFV G L S LAVVG Sbjct: 77 LAEAQAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVG 136 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG++ R C+ L +TI SGLA GID AH+AAL+ G ++AVL G++ I Sbjct: 137 TRQATDYGKKATRKLCQGLVANRMTIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + ++ +++E GAL+SE L A FP+RNRIISGLS G LVVE+ + G+L Sbjct: 197 YTDPKGKIYPAIIE-NGALLSEEWLGSEITAEKFPKRNRIISGLSLGTLVVESDYKGGAL 255 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDA 293 +TA AL+Q REVFA+PG I + G + LI+ A LV E+IL LQ + Sbjct: 256 ITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLF 315 Query: 294 PENSFYS-PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 EN P Q+ ++ ++LA + +D + E++G V ++ L ELEL + Sbjct: 316 EENGHRPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVE 375 Query: 353 AVPGGYVRL 361 +PG + + Sbjct: 376 QLPGKFFKR 384 >UniRef50_B1L9Q3 DNA protecting protein DprA n=6 Tax=Thermotogaceae RepID=B1L9Q3_THESQ Length = 337 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 15/317 (4%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + + ++ +E + + N L+ + YP L P LFV G+ Sbjct: 35 PKKTRKFLEKCGKEELERQKELIRKHNVKLVSFWEDDYPQHLREIRYPPAVLFVRGDAEL 94 Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 L + VVG+R + YG + F + L+ I SG+A GID VAHK AL G ++ Sbjct: 95 LKEKCVGVVGTRRPTSYGVNVTKRFVKLLSEY-FVIVSGMAFGIDSVAHKEALSSGGKTV 153 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVLG G++ ++PR + RL ++ + G +VSE+P+ ++FP RNRII+GLS ++V Sbjct: 154 AVLGTGVDVVYPRSNERLFHEIV-KNGCVVSEYPMGTRARKHHFPARNRIIAGLSDAIIV 212 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 EA ++SG+L+T + ALE GR+VFA+PG I SEG ++LIK GA +T+ E++ + Sbjct: 213 TEAPIKSGALITVKFALESGRDVFAVPGDIDRKTSEGTNYLIKSGAYPLTDEEDLETHFG 272 Query: 285 FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLE 344 + ++ + VD + E G V EV+ + E Sbjct: 273 I-------------RRIASPSLDDDKKKIYDLLRSSPKTVDELVEELGWSVSEVLRVISE 319 Query: 345 LELAGWIAAVPGGYVRL 361 +EL G I G Y L Sbjct: 320 MELMGMIWFDGGAYRLL 336 >UniRef50_Q7MXB1 DNA processing protein DprA, putative n=2 Tax=Porphyromonas gingivalis RepID=Q7MXB1_PORGI Length = 374 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 13/368 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + L + + ++ + I + + + +R L Sbjct: 11 EQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSV 70 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L + ++ + YP +L D P L+ +G + L++VG+R Sbjct: 71 MEEARRKLDQALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTR 130 Query: 117 AHSWYGERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + YG LA + I SGLA G+D AHKAAL ++AVL +GL+ I Sbjct: 131 NITAYGRTATERIVSGLAETIPDLLIVSGLAYGVDVAAHKAALDNGLPTVAVLAHGLDRI 190 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H +A +L GG L +++P+ P +NF RNRI++GLS LV+E+A + GSL Sbjct: 191 YPSGHRSIAMEMLRNGGLL-TDYPMGTEPERFNFVGRNRIVAGLSDATLVIESAEKGGSL 249 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDA 293 +TA A REV ALPG + S G + LI+ A LV+ +++L L + Sbjct: 250 ITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKP 309 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 +F D + + VD + G P+ +V QL +LEL G + + Sbjct: 310 QTLNFRPDSWPDTPVAEC----LLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQS 365 Query: 354 VPGGYVRL 361 PGG + Sbjct: 366 QPGGIYSV 373 >UniRef50_B9L0A8 Probable smf protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0A8_THERP Length = 367 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 188/372 (50%), Gaps = 13/372 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPR 57 M + WL ++ + + R+ L+ GL R ++ + Sbjct: 1 MDERAAWLGFHAVDGISLRQLERLIAQTGSALAAWHAPEAELRALGLPEGPLARLVAARQ 60 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E L + + +I E YPP L P ALF+ G L + +A+VG+R Sbjct: 61 AGLPEKILAQVRRVGARVIVYPDEDYPPLLREIASPPLALFLRGTLPPAEAPAVALVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + F LA GVT+ SGLARGID VAH+A L G +IAVLG G++ ++P Sbjct: 121 QASNYGIQVAATFATALAEAGVTVVSGLARGIDRVAHEATLDAGGRTIAVLGTGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + EQ GALV+EF + PP A NFP RNRIISGLS GV+V+EA RSG+L+T Sbjct: 181 PEHRALAQRIAEQ-GALVTEFLPETPPYAGNFPVRNRIISGLSLGVVVIEAPERSGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A AL+Q R V+A+PGPI +PG+ G L++ GA V +EILE+LQ LP Sbjct: 240 ASFALDQNRSVYAVPGPIFSPGTAGILRLLRDGATPVGSAQEILEDLQLVARQLPL---- 295 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 P V ++A +G E +D +A G + ++ LLEL+L G + + Sbjct: 296 ----PAAPAVPERARPVVAALGPEPKHIDELAAELGMGIAQLSALLLELQLEGIVTHLGA 351 Query: 357 GYVRLRRACHVR 368 + L R Sbjct: 352 QHYALASPLLAR 363 >UniRef50_A8SLV8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLV8_9FIRM Length = 364 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 113/368 (30%), Positives = 191/368 (51%), Gaps = 12/368 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWV--AKQSHIDAVVLQQTG----LTLRQAQRFLS 54 M + + L L + + + + I + LT ++ + Sbjct: 1 MRNEDALLFLSYL-NFDYKIKDELLNHFTLEHIEEIFDLSGDYFKENKLLTKNNIEKLVE 59 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 K + ++ +LE+ + + SE YP L P ++ +G++ F L++V Sbjct: 60 EREKFNSDAYRDYLEKKKVNYVSILSENYPINLKDIEYIPQVIYYKGDILPEDEFALSIV 119 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG F +++ G+ I SG+A GID ++H+AAL+ G +IAVLG G++ Sbjct: 120 GSRKCTNYGAWATEYFARSISELGIRIVSGMALGIDSISHRAALKSGGRTIAVLGCGVDI 179 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P+ + RL ++E GA++SEFP+ +PPLA+NFP RNRIISGLSK +LV+EA RSG+ Sbjct: 180 AYPKTNYRLYDEIIE-NGAVMSEFPIGMPPLAHNFPVRNRIISGLSKALLVIEAQDRSGT 238 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+T+R A EQ +E+FALPG I + S G + LIK GA++ T+ ++I++ + + + Sbjct: 239 LITSRFANEQSKEIFALPGNINSLYSRGTNKLIKDGALIATDYQDIIDGV---IDFSEFI 295 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + + + +E + ++ G + E T L LEL G+I Sbjct: 296 LNKNKEEKDLDILDAKELLIYNLINEEPKSQNKISTITGFSIIETNTILTALELKGFIKE 355 Query: 354 VPGGYVRL 361 + GG + Sbjct: 356 LNGGIFVV 363 >UniRef50_A6VLU4 DNA protecting protein DprA n=4 Tax=Pasteurellaceae RepID=A6VLU4_ACTSZ Length = 376 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 138/351 (39%), Positives = 188/351 (53%), Gaps = 14/351 (3%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAH--WVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR 57 M E LRL+ + L + + +I + DA G T Q +R+ R Sbjct: 1 MDKYTETLLRLLQVPRLGANTVSQILTTIELNTLLSYDADAFYAIGWTTYQIKRWFKPER 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K I+ +L W ++ + +I YP L P LFV+G L Q+A+VGSR Sbjct: 61 KYIDPALEWGQKRGNQIIHCFHLDYPYLLKQIESSPPVLFVQGNTGLLIHPQIAIVGSRY 120 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG W + F L G +TSGLA+GID +H+AAL V G ++AVLGNGLN I+P Sbjct: 121 CSDYGSYWAKYFAAELCAAGFAVTSGLAKGIDAYSHQAALDVQGKTVAVLGNGLNQIYPA 180 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + +LA ++L+ G LV+EF D PPL NFPRRNRIISGLS LVVEA+ RSGSL+TA Sbjct: 181 VNRKLAQAILDNDGTLVTEFIPDQPPLPANFPRRNRIISGLSLATLVVEASARSGSLITA 240 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH--------- 288 R ALEQ REVFA+PG + N S G H LIKQGA+LV ++++EN+ + Sbjct: 241 RFALEQNREVFAIPGNLNNDFSRGCHKLIKQGAMLVENAKDVIENIPYYGFTNMQLRDVK 300 Query: 289 --WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 P + P + P+L +G ++ VD +A + G V Sbjct: 301 DVLKATVPCPNPRPPSARHPDPQHPDLFKLIGHDLISVDELATQTGLGVEA 351 >UniRef50_Q311L8 DNA processing protein DprA, putative n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L8_DESDG Length = 425 Score = 334 bits (856), Expect = 3e-90, Method: Composition-based stats. Identities = 132/409 (32%), Positives = 174/409 (42%), Gaps = 52/409 (12%) Query: 1 MVD---TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFL 53 M + W L L + R+ W D G+ +A Sbjct: 16 MDEAGRRNFWASLALRYSCGIGPRTWKRLLTWYGSPYAAVMDVADWAAAGVPATRADSCR 75 Query: 54 S-FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 R+ + + + ++ + YP +L D P L+ G+ L + + V Sbjct: 76 RGLWREQARAEWDAAGKAGYKILLWNDPRYPERLKEIPDPPLFLYYLGDASLLSAPMVGV 135 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG L+ RG+TI SGLARGID AH AAL+ G S+AVLGNG + Sbjct: 136 VGARRCSRYGLDVAACISRELSRRGITIASGLARGIDRQAHIAALEGIGSSVAVLGNGPD 195 Query: 173 TIHPRRHAR-LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 I+P + L + L G +V+EF VPP + NFP RNRIISGLS G+LVVEAA RS Sbjct: 196 QIYPPENRDVLFS--LAGRGLVVTEFAPGVPPESKNFPVRNRIISGLSLGILVVEAAARS 253 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TAR ALEQGREVFA+PG I S G H LIKQGA V E+IL L L Sbjct: 254 GSLITARLALEQGREVFAVPGRITAQTSSGCHELIKQGARTVCGAEDILLELAPLLRAAA 313 Query: 292 DAPENSF----------------------------------------YSPDQQDVALPFP 311 + P + P Sbjct: 314 EKPSSPAVQEPMHPHTAHSVPQSAGACCHSDVPSVVAAAPADGGAAGTEPATSPADADGQ 373 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++LA + +DV+ V LL LE+AG + PG Sbjct: 374 KVLAVLARRGGLHIDVLCRELDWDAGRVSAALLLLEIAGSVRQAPGMLY 422 >UniRef50_UPI00017886C0 DNA protecting protein DprA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017886C0 Length = 391 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 107/388 (27%), Positives = 176/388 (45%), Gaps = 30/388 (7%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKS 59 D + + L + + R+ + + + GL + +A + + Sbjct: 4 DRLLLIALHESEGIGWKTINRMVLNGELHEGLLSYDAQDWRACGLPVEKANKLAKEFPIA 63 Query: 60 IES-----------SLCWLE--------QPNHHLIPADSEFYPPQLLATTDYPGALFVEG 100 +E L +E + +I A YP L ++ P L+ G Sbjct: 64 VERKRVELSNDEEVELRQVEDKVWNLTNRTKIRIITALDAVYPDMLKSSPQAPWVLYCIG 123 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 + H L + +A+VG+R + YG + + E L G+ + SG+ARGID V H+ AL+ Sbjct: 124 DPHLLSTPGIAMVGTRMPTGYGRKVASMLSEALTRAGLMVVSGMARGIDSVVHETALRSG 183 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++AVLG G++ I+P + L + + G ++SE+P L FP+RNRII+GL+ Sbjct: 184 GPTVAVLGAGIDVIYPPENRSLYEEIAAK-GLIISEYPPGTKALPGFFPQRNRIIAGLTL 242 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 G +VVEA RSGSL+TA ALE GR+VF++PGP+ +P S G LIKQGA +VTE +I+ Sbjct: 243 GTVVVEADARSGSLITADLALEAGRDVFSVPGPLTSPKSRGTLDLIKQGAKMVTEAGDII 302 Query: 281 ENLQFGLH-------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ 333 E L + + ++ + +D + E Sbjct: 303 EEYDSWLPKGVSDTYNKERRAPRQERPDELAGLTNDERQIYHMLEQGPGSLDEMIECTRW 362 Query: 334 PVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + LL L + I +PG ++ Sbjct: 363 DFGHLHSVLLSLIIKKQITQLPGAIYKI 390 >UniRef50_C4G349 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G349_ABIDE Length = 366 Score = 333 bits (854), Expect = 6e-90, Method: Composition-based stats. Identities = 112/367 (30%), Positives = 168/367 (45%), Gaps = 14/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV-----LQQTGLTLRQAQRFLSF 55 M + + L + + + V L+ GL + +R Sbjct: 1 MREELLMFWLSLEGHVAKIKYDILVANYGSLAEAYEAVSKGKCLKLKGLGDKLLERLKKL 60 Query: 56 -PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + IE ++ ++ YP +L P LF +G L ++VVG Sbjct: 61 SDKSEIEEKYECMKDKGVKYSHYFNKDYPDKLRNICSAPIGLFYKGSLPDNEEKIISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SR + G + + L+ GV+I SG+A GID AH ALQ N G + AVLG G + Sbjct: 121 SRDATDKGLYYANKISKELSDSGVSIVSGMALGIDSSAHYGALQGNKGKTYAVLGCGADV 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L S++E+GG ++SEFPL P+ NFP+RNRIISG+S GV VVEA +SGS Sbjct: 181 CYPPNNIELYLSIIEKGG-VISEFPLGTQPVRANFPQRNRIISGISDGVFVVEARDKSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA LEQG+ ++ALPG P S G + LI+ GA LV E ++ILE+ F + + Sbjct: 240 LITADMGLEQGKNIYALPGRSEEPLSRGTNKLIQYGAKLVNEAKDILEDFDFPILNIKQE 299 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + + A + + + G E+ LLELE G++ Sbjct: 300 CLQNLI------LESHEKIVYATLCLTPKHISEILSETGLDEGELFKVLLELEFKGYVRR 353 Query: 354 VPGGYVR 360 Y Sbjct: 354 TSFEYYI 360 >UniRef50_A0LDV3 DNA protecting protein DprA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDV3_MAGSM Length = 365 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 125/364 (34%), Positives = 174/364 (47%), Gaps = 13/364 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 WL+LM L ++ A I + R +E L Sbjct: 8 AWLQLMLTPGLGPISLLHYERQFATPHAILRAL-------PRLKPELTLADASWVERLLT 60 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGER 124 Q + YP QLL +D P LF++G+ L +A+VG+R S GER Sbjct: 61 QTHQMGATALHWREPAYPQQLLEISDPPPLLFIQGDGALLNQEPLIAMVGTRRCSRNGER 120 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L +T SGLA GID AH +L G ++AVLG GL+ +P+ + +L A Sbjct: 121 FAHKLAADLGQMRLTTVSGLAVGIDSAAHAGSLLGGGATVAVLGCGLDVSYPKPNMQLKA 180 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ Q G LVSE+P P FPRRNRIISGLS+GV+VVE L+SGSL+TAR ALEQ Sbjct: 181 QIIRQ-GCLVSEYPPGTQPHPKRFPRRNRIISGLSRGVVVVEGGLKSGSLITARMALEQN 239 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL----HWLPDAPENSFYS 300 REVFA+PG + + S G H L+K+GA LV ++++ L +G A S Sbjct: 240 REVFAVPGAVDDERSRGVHQLLKEGATLVESAADVVQALAWGGVVPEQAKRVAVIPSGGV 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + ++A +GD VD + E+ + LL+LEL G I GG + Sbjct: 300 SEVLPDIPGAASVVAALGDGALTVDGLLRLCHLTPAELSSTLLQLELCGIITREMGGTLA 359 Query: 361 LRRA 364 L Sbjct: 360 LVPQ 363 >UniRef50_B2TJ37 DNA uptake protein n=6 Tax=Clostridium RepID=B2TJ37_CLOBB Length = 352 Score = 333 bits (853), Expect = 8e-90, Method: Composition-based stats. Identities = 100/364 (27%), Positives = 182/364 (50%), Gaps = 19/364 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M++ E+W L+ I + + + + +I + ++ +F + + Sbjct: 1 MLNYELWFILLDI---SNKEKINLIDEYESEENIYNNFENILKENKKLQKKLGNFEKNDL 57 Query: 61 ESSL----CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q I + Y +L P LF +G+++ ++ +A+VG+R Sbjct: 58 VYQIISVNNTLNQKGIGYITYSNPLYKERLKLLLPTPYYLFYKGDINLINDKSIAIVGAR 117 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y +L + + T +T+ SG ARG+D +AHK+AL+ G +I VLG G++ ++P Sbjct: 118 KCSNYALVVTKLLTKEIITNNITLISGGARGVDSIAHKSALENEGKTIIVLGCGIDVVYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + ++ + G ++SEFPL PL +NFP RNRIISGLS+GV+VVEA+ +SGSL+T Sbjct: 178 SENIALFSKVI-KDGLIISEFPLGTKPLRHNFPLRNRIISGLSEGVIVVEASEKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A EQ ++V +PG I G++G + LIK G +++ +++ + Sbjct: 237 ARIAQEQNKDVLVVPGSILYEGAKGSNKLIKDGCDVLSSIDDLNKFFD-----------T 285 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + + + E+L + D +D + +++ + L E+++ I +PG Sbjct: 286 NHIDIEPMKIRPEKREILDMITDAPIHIDDIFKKSCVDRGALYALLFEMQIKNEIICLPG 345 Query: 357 GYVR 360 Y Sbjct: 346 NYYI 349 >UniRef50_Q11V51 DNA processing protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11V51_CYTH3 Length = 364 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFP 56 M + + + I + + + I + G+ S Sbjct: 1 MQEKIYQVAVGLIPGVGAATTKTLISYCGCAEQIFKTPKGKLKNIPGIGAVTVDNIYSAS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ES + ++ + L+ YP +L D P L+ +G +A+VG+ Sbjct: 61 VLHEAESIVERAQKLDTQLLFYTDPDYPNRLKQIPDAPTLLYYKGSSALNPPKSIAIVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG R E +A+ + SGLA GID AH+ AL++ +I V+ NG N I+ Sbjct: 121 RKATEYGRSVVRKLLEEIASYKPLVVSGLAYGIDIQAHRDALELGLETIGVMANGTNIIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H A +LEQGG L SE+ D FP RNRII+G++ +V+EA G+L+ Sbjct: 181 PSVHKNTALKMLEQGGLL-SEYTFDSIAEPMRFPARNRIIAGMTDATIVIEATQSGGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAP 294 TA A REV A+PG I + SEG + LIKQ A +T +++E L + + A Sbjct: 240 TAEIADSYDREVLAVPGRITDMASEGCNNLIKQNKAHALTSAADLIELLNWDITPSQQAH 299 Query: 295 ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 ++ D+ + A + +E +D ++ ++ + ++ + LLE+E G + A Sbjct: 300 KHII----LADLEEDELMIYAVLTDNEGIHIDELSWKSQLSMQKISSVLLEMEFKGIVKA 355 Query: 354 VPGGYVRLR 362 +PG LR Sbjct: 356 LPGKKFSLR 364 >UniRef50_A7VIM7 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIM7_9CLOT Length = 366 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 132/365 (36%), Positives = 193/365 (52%), Gaps = 11/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLS-FPR 57 M + L L + M +I + + ++ LT Q + L Sbjct: 1 MDLDLLHLWLGMFPDITNMTMGKILAYFGGLQELWEAPDREIQGALTEIQGSKILELRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAVVGS 115 K I + L++ N I ++P +LL D P L+ G + L + +AVVG+ Sbjct: 61 KKIIAYKNRLKERNITYIYPGHPYFPEELLNIPDCPRLLYARGRVEELALNRPGIAVVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGNGLNTI 174 R S YG+ R F LA+ I SGLA GIDG A +AA++ NG +IAVLG G+N Sbjct: 121 RKASAYGKEIARSFVSKLASYQTNIISGLAAGIDGTAQRAAVEIENGFTIAVLGCGINIC 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + L + E+ G ++SE+ LDV P + FP RNRIISGL+KGVLVVEA +SGSL Sbjct: 181 YPRENYDLYECI-ERSGVILSEYGLDVEPAKWRFPLRNRIISGLAKGVLVVEAQKKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA ALEQGREV+A+PG IG+ SEG + LI+QGA+LVT+ +I++ L Sbjct: 240 ITADQALEQGREVYAVPGRIGDRNSEGCNQLIRQGAMLVTDAADIIDELGLCKKEEIAQK 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ + LP E+ A +G +V ++ + R QP V++ L ++E G+I Sbjct: 300 KDMVCREQ---LDLPEQEIFACLGRDVVYIEDICSRVDQPPALVLSTLFDMEKKGYIRQ- 355 Query: 355 PGGYV 359 P Y Sbjct: 356 PMRYY 360 >UniRef50_Q18BD7 Putative competence protein n=5 Tax=Clostridium difficile RepID=Q18BD7_CLOD6 Length = 369 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 11/369 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + +L L SI + + I + + I ++ ++L + + + Sbjct: 4 MEKRDTYLWLKSIGGITTKTIEIIENEIVNIEDIFDFSEKEIYNLKNISLNIRKNIVKYR 63 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +E+ L + I + YP L + P LF +G++ +++ +A+VG Sbjct: 64 GHAYLENIKELLYKKAIKYICKYDKEYPENLKNIYNAPKLLFYKGDIGLVNNNFNIAIVG 123 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ GV I SGLA GID +H + +IAVLG+G++ Sbjct: 124 SRKPTAYGINCAKTISCQLSQYGVNIVSGLAIGIDAYSHIGCMSGKSKTIAVLGSGVDNP 183 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+++ L+ +LE GG L+SE+ ++ Y+F RNRIISGLS GV+VVEAA++SG+L Sbjct: 184 LPKQNLHLSNKILENGGLLLSEYNINSTVAPYHFSNRNRIISGLSDGVVVVEAAIKSGAL 243 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +T ALE G+ VFA+PG I + S G H +IK+GA L+ ++IL Sbjct: 244 ITVDFALEHGKNVFAIPGNINSQMSRGCHKIIKEGAKLIENIDDILNEYNIF----NIID 299 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + D + +++ + E +D + + G + V + + EL L + Sbjct: 300 KKINQKYDNISLNAKSKQIIEAIKREGNLHIDSICDYTGIEIKYVNSIINELVLNELVVE 359 Query: 354 VPGGYVRLR 362 + L Sbjct: 360 MNNKTYSLN 368 >UniRef50_Q48QH9 DNA processing protein DprA n=24 Tax=Proteobacteria RepID=Q48QH9_PSE14 Length = 372 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 147/365 (40%), Positives = 195/365 (53%), Gaps = 9/365 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPRKS 59 + E LR+ + + R+ S + + G+ A+ + + Sbjct: 13 ELEARLRMHRLPEIGPKRFSRLIEAFGSASSALSAPASAWRALGIPGACAEARRAPSVRD 72 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++L WLE P HL+ D YP L D P +F+ G+ L QL +VGSR Sbjct: 73 GASAALAWLECPAQHLLMWDDPCYPALLAEIADPPPLIFIAGDPSILERPQLGMVGSRRA 132 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R F +LA G ITSGLARGIDG AH+ AL V G +I VLG L ++P++ Sbjct: 133 SRPGLDTARAFARSLAGAGFVITSGLARGIDGAAHQGALDVGGHTIGVLGTRLEKLYPQQ 192 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LAA + QGGA++SEFPLD P NFPRRNRIISGLS GVLVVEA++ SGSL+TAR Sbjct: 193 HRALAAQMAAQGGAVISEFPLDAEPQPSNFPRRNRIISGLSLGVLVVEASVASGSLITAR 252 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A EQGREV+A+PG I +PG++G H LI+ GA LV E ILE LQ P AP + Sbjct: 253 LAAEQGREVYAIPGSIHHPGAKGCHQLIRDGATLVETVEHILEGLQHWKSVAPAAPPETP 312 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 P LLA + + ++ +G P+P+V+ L ELEL G I+ G + Sbjct: 313 AKPV-----PCDHPLLALLHAAPHTSEGLSVSSGWPLPKVLAGLTELELDGRISCEAGRW 367 Query: 359 VRLRR 363 Sbjct: 368 FARAP 372 >UniRef50_C1I7K2 SMF family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7K2_9CLOT Length = 348 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 107/360 (29%), Positives = 172/360 (47%), Gaps = 18/360 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + E+W L SI + + + +S+I Q+ + Q + + I Sbjct: 4 MKNDELWFILTSI---SNEKKLLLLEKYENESNIRN---QKNEIREFQKIKDKDISEEKI 57 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ I S+ YP L + P LF +G L L AV+G+R + Sbjct: 58 SDFNNYINSNGIGYITIKSKEYPETLKHIEEPPYVLFYKGNLELLMGSLAAVIGARKCTQ 117 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG ++ L+ +T+ SGLA GID VA K AL+ +G +I +LG G++ ++P+ + Sbjct: 118 YGIEIAKIMGRELSENNITVVSGLAAGIDSVAQKVALEYSGKTIGILGCGIDIVYPKCNK 177 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + G L+SEF PP++YNFPRRNRIISG+S V+VVEA +SG+L+T A Sbjct: 178 FLYEKVI-REGLLISEFLPKTPPMSYNFPRRNRIISGISDKVIVVEATKKSGTLITVDYA 236 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L G+E+ A+PGP+ N SEG + LI+ GA T E++ + Sbjct: 237 LSIGKEIMAVPGPVINGNSEGCNKLIRDGAKPFTGMEDLYDFFNIKKD-----------I 285 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ + LL + +E +D + E + L E++ I +PG Y Sbjct: 286 KEKNENNGYKEYLLKVIDNEPKHLDDIIESVNVDRKVLFELLFEMQNRNEIICLPGNYYA 345 >UniRef50_B1GYR3 DprA-like DNA processing protein n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR3_UNCTG Length = 364 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 110/371 (29%), Positives = 177/371 (47%), Gaps = 15/371 (4%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF 55 M + E+ +L+S + + R+ I + G+ A + Sbjct: 1 MNERELSLFKLLSATDIGAIRFFRLLDKFGDTELILKASKRDLMSVEGIGQAIADTIFNS 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 E L + N + + YP L D P L+++G + +++VG Sbjct: 61 SDSGKAEKELETAIKNNIKITFYYNSDYPKPLRDFADKPLILYIKGNILEKDFDSISIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S YG+ F A +G+TI SGLARG+D AH AL+ +IAVLGNGL Sbjct: 121 SRRISNYGKTVTSEFASYFAKKGITIVSGLARGVDSQAHITALENKSRTIAVLGNGLLVN 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P +A+L + Q GA++SE L P FPRRNRII+G S+ L+ EAAL+SG+L Sbjct: 181 YPPENAKLQEKI-SQCGAVISELQLRKQPDRGTFPRRNRIIAGFSRATLLTEAALKSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR E G++VFA+PG I + S+G + LI+ GA + P ++ + L++ + Sbjct: 240 ITARFCAEYGKDVFAVPGSIYSSISKGTNELIQNGAFIALGPHDMADQLKW------TSK 293 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEV--TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + + E+L+ + ++ P D++A++ + E LL+LE+ G I Sbjct: 294 DKISKTNKLPSLDKLELEVLSLIENDSAGLPPDLIAQKLNIGISETAPVLLKLEINGLIK 353 Query: 353 AVPGGYVRLRR 363 PG Sbjct: 354 TTPGQIYVRAY 364 >UniRef50_Q5FFF2 Smf protein (DNA processing chain A) n=11 Tax=Rickettsiales RepID=Q5FFF2_EHRRG Length = 375 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 7/365 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-KSI 60 + LRL+ + + +++ + + + + + ++ Sbjct: 10 QELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIK-KSKAYDKINTICSIETA 68 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E + + +I E YP L DYP L G++ L +A+VGSR S Sbjct: 69 EQEIENTYKIGGRIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSI 128 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G+ + LA G TI SGLA+GID AH + + +IA++GNG+N ++P + Sbjct: 129 NGKNFAYKLSYELANSGFTIVSGLAKGIDKSAH-SIIFKQLPTIAIMGNGINIVYPEENT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L ++ + GG + +EFP P A FP+RNRIISGLS GV++VEA+++SGSL+TA A Sbjct: 188 TLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGSLITANFA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFY 299 + Q REVFA+PG + +G ++LIK G A L+ +I+E+LQF + Sbjct: 248 IHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNI 307 Query: 300 SPDQQDVALPFPE---LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + Q +L ++ ++ + + + L+ELE + I +P Sbjct: 308 ITNYQSTTEIDNAKNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERLPN 367 Query: 357 GYVRL 361 V L Sbjct: 368 NKVML 372 >UniRef50_P43862 Protein smf n=33 Tax=Pasteurellaceae RepID=SMF_HAEIN Length = 373 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 198/345 (57%), Gaps = 14/345 (4%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFP 56 M D LRLM + L G + +I + + + +Q G Q +R+ Sbjct: 1 MNDITYTLLRLMQVPKLGGVGIDKILSNI-TLNELLNYDDVAFRQMGWGAIQIRRWFKPE 59 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 K IE +L W ++ +HL+ S FYP L T +P LFV+G L AL Q+A+VGSR Sbjct: 60 AKFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YGE W + F L+ G TITSGLA GIDG H+A + + G +IAVLG+GL I+P Sbjct: 120 YCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +H RL+A ++E GALVSEF + P+A NFPRRNRIISGLS G LVVEA +SGSL+T Sbjct: 180 SKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF-------GLHW 289 AR ALEQ REVFA+PG I N S+G H LIKQGA+LV ++ILE L + + Sbjct: 240 ARYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDF 299 Query: 290 LPDAPENSFYSPDQQDV--ALPFPELLANVGDEVTPVDVVAERAG 332 A N PD + + A P+L + +G +D +AE Sbjct: 300 DQIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFN 344 >UniRef50_Q0ANX9 DNA protecting protein DprA n=3 Tax=Alphaproteobacteria RepID=Q0ANX9_MARMM Length = 387 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 131/384 (34%), Positives = 184/384 (47%), Gaps = 25/384 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + +WLRL L R + + + R+ +++E Sbjct: 9 TERVMWLRLARTRGLGAIGFARAIAHYGNAADAIDDLPARARSAGRRV--LDIPSPETVE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + +E+ LI YP L A P L V G L L A+VG+R S Sbjct: 67 AEMEQIERVGARLITGLDPDYPALLAAIPGPPPTLIVRGNLSLLDRPACAMVGARNASAV 126 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R+ R L + + SGLARGIDG AH AL+ +IAVL G++ I+P H Sbjct: 127 GLRFARELANGLGREDIVVVSGLARGIDGAAHSGALESG--TIAVLAGGIDHIYPPEHGE 184 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L A L E G L+SE PL P A +FPRRNR+ISGL+ G LVVEAALRSGSL+TAR A Sbjct: 185 LHARLGE-DGLLLSEVPLGQSPTARDFPRRNRLISGLALGTLVVEAALRSGSLITARYAA 243 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL---------QFGLHWLPD 292 EQGREV A+PG +P + G + L++ GA L+ +++L+ L GL LP Sbjct: 244 EQGREVMAVPGSPLDPRARGSNQLLRDGAHLIESVDDVLDILSKARRPEPPGHGLEDLPA 303 Query: 293 APENSFYSPDQQDVA-----------LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + ++ ++ P L A + D +A A P+ EV Sbjct: 304 MSLPDLFDDEEAGLSTDEGLSNTSALSPLERLRALLSPAPVSGDELARAADLPIGEVQAM 363 Query: 342 LLELELAGWIAAVPGGYVRLRRAC 365 L+E+E++G IA +P G V+ RR Sbjct: 364 LMEMEMSGEIATLPDGLVQRRRQS 387 >UniRef50_A5N825 Predicted Smf protein n=4 Tax=Clostridium RepID=A5N825_CLOK5 Length = 366 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 173/368 (47%), Gaps = 20/368 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ------TGLTLRQAQRFLS 54 M ++W + + I + + I + + Sbjct: 1 MNIYDLWFA---SVRMSNKIKINIINRFSNIQEIYEKNIYDNNYIYSVKKNDKIYMELKK 57 Query: 55 FPR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAV 112 + +++ + + + + E YP +L D P LF +G + L++ +A+ Sbjct: 58 AWNTEKLQNLMEYCLKEGIKTVNFYEEDYPERLKNYDDSPPVLFYKGNIKNLNNNLNVAL 117 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S+YGE L + ++ + + SG+ARGID AH+ +++ G + VLG+G++ Sbjct: 118 VGARDCSFYGENITSLISKEVSINNINVISGMARGIDSCAHRTSIESGGYTCGVLGSGVD 177 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P ++ +L +L Q G ++SEF P AYNFP RNRIISGLS +++VEA +SG Sbjct: 178 VIYPSKNKKLYEDIL-QKGCVLSEFIPKTRPYAYNFPLRNRIISGLSDVIIIVEAGDKSG 236 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA CALEQG++V A+PG + + S G + LI+ GA + T +++ + L Sbjct: 237 ALITAGCALEQGKDVMAVPGSVFSSKSRGTNKLIRDGAHVFTCLQDLFQLLSLSYMNKNY 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 E + ++L +G +D + + ++ L EL+L I Sbjct: 297 KKE--------DILNDKEEKILKIIGQIPRNIDEICRITNIDIKQLYELLFELQLKNKII 348 Query: 353 AVPGGYVR 360 + G Y Sbjct: 349 CLSGNYYV 356 >UniRef50_C1DXS3 DNA protecting protein DprA n=3 Tax=Sulfurihydrogenibium RepID=C1DXS3_SULAA Length = 356 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 16/366 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-- 56 M + L L I L + ++ + + + A+ + Sbjct: 1 MEEILSCLELYFIKGLGNVSIKKLIEHYSTATSVLNADFNDLKENFGENIAKLITNRDTS 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ E+ ++P + YP L D P ++++G + + +AVVGS Sbjct: 61 LKEKALKEYEKAEKLGVKIVPLSYQDYPFLLKNIPDPPPVIYIKG-IFPIPENTVAVVGS 119 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS YG LA GV I SG+A GID +AHK AL+ + AVLG+G++ ++ Sbjct: 120 RKHSSYGVYVVNSIVRELAKSGVNIVSGMALGIDTIAHKVALEEGSFTTAVLGSGIDVVY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + +L + E G ++SEFP+ P +Y FP+RNR I+GLS GV ++EA +SGSL+ Sbjct: 180 PFENRKLYDKITE-NGCVISEFPIGTKPSSYTFPQRNRSIAGLSYGVFIIEAPDKSGSLI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA E GR VF +P I ++G + LIK+GAI +TE +++ E L F + Sbjct: 239 TANYGNEYGRLVFTVPANINLSTAKGNNSLIKEGAIAITEFKDLKEFLPFL--------K 290 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 +S D+ E+L + + D + E+ P++ + L L+L I + Sbjct: 291 SSVNIDYLSDLTEQEKEVLMFLDSK-KYYDEILEKFSNKYPDIDSILFNLQLKNLIQSDS 349 Query: 356 GGYVRL 361 Y R+ Sbjct: 350 MFYYRV 355 >UniRef50_Q0VTD9 Peptide deformylase, DNA processing protein n=2 Tax=Alcanivorax RepID=Q0VTD9_ALCBS Length = 353 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 183/362 (50%), Gaps = 13/362 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L L ++ S + R S + L L++ L ++ Sbjct: 1 MDGQFKRLLLQALFSPSSAALGRALKQHRSVSAAASDFLPLLPAGLKERASLLD-NTGNL 59 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 ++ L I E YPP L D PG + V G + AL+S LA+VG+R S Sbjct: 60 QAYYEQLSGQGWRWIAFGDEDYPPLLAQIHDPPGVIAVRGNVEALNSPALAIVGARNASA 119 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G R F LA G I SGLA GID AH+ A+ G S+AV+GNG + I+P R+ Sbjct: 120 DGLDNSRRFARKLAASGFVIASGLALGIDAAAHRGAVSA-GRSVAVMGNGPDRIYPPRNG 178 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA +++ GGALVSEF PL FP RNR+ISGLS +VVEAA++SGSL+TAR A Sbjct: 179 SLAEEIVDTGGALVSEFAPGARPLPAQFPMRNRVISGLSLATIVVEAAIKSGSLITARTA 238 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L Q REVFA+PG I NP S+G H L++ GA + ++I + + S Sbjct: 239 LAQNREVFAIPGSIHNPLSKGCHQLLRDGASWLESVDDIFQAFG-----------DFQRS 287 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + P LL + V +D + ER G PV + QL +LEL GW+ V GGY++ Sbjct: 288 VEAAGIHCEAPALLTQLTSGVNSLDALQERTGLPVAALAGQLADLELEGWVERVAGGYLK 347 Query: 361 LR 362 + Sbjct: 348 RQ 349 >UniRef50_Q1N3W6 Smf protein n=1 Tax=Bermanella marisrubri RepID=Q1N3W6_9GAMM Length = 391 Score = 329 bits (844), Expect = 9e-89, Method: Composition-based stats. Identities = 137/371 (36%), Positives = 199/371 (53%), Gaps = 18/371 (4%) Query: 7 WLRLMSISSLYGDDMVRI--AHWVAKQSHIDAVVLQQTGLTLRQAQRF----LSFPRKSI 60 +L L I + + I A + D +Q G++L++ Q + K++ Sbjct: 15 YLALSCIKGIGIQTLSLIHCADGLDYVHQWDEQAFRQLGISLKRTQLLMDGLRNPFSKTL 74 Query: 61 ESSLCWLEQP-NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 E +L W + NHH++ SE YP +L P L V+G+L +L + Q+A+VGSR S Sbjct: 75 EQTLDWQQSADNHHIVTPVSEAYPDRLGHIATPPTMLMVKGQLDSLLAAQVAIVGSRHPS 134 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + G F LA GV +TSGLARGID AH+ AL + +IAVLG+GLN I+P+ + Sbjct: 135 FQGRHEAYEFAVGLANSGVVVTSGLARGIDTQAHQGALDADAATIAVLGSGLNHIYPKEN 194 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A LA + Q GALVSEF L P A +FP+RNRI+SGLS GVLV+EA L SGSL+TAR Sbjct: 195 AELAEQIC-QKGALVSEFALHTRPSAGHFPKRNRIVSGLSLGVLVIEAHLMSGSLITARQ 253 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL----------ENLQFGLHW 289 ALEQ REVFA+PG + N G H+LI+QGA LV P++IL +N+ L Sbjct: 254 ALEQNREVFAIPGNLSNVQKSGCHYLIRQGATLVESPDQILLDLQGQIRQTQNITLMLAN 313 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + + ++ + ++ + + G V ++ LL++EL Sbjct: 314 DSHNSKPKVSREIPEGMQPEHYQVYRFLDQGGVGMEQLIQHTGLSVSKLNELLLDMELNM 373 Query: 350 WIAAVPGGYVR 360 W+ G + R Sbjct: 374 WVTNEQGLFFR 384 >UniRef50_Q1GE46 DNA processing protein DprA putative n=23 Tax=Rhodobacterales RepID=Q1GE46_SILST Length = 382 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 12/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ + R+ ++ + + + + + + + +++ Sbjct: 19 DQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKI--YSKDALD 76 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + N L+ YP L + + P AL+ G L + +A+VG+R S Sbjct: 77 AEFENAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSL 136 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGID AH+ AL +IAV G G++ I+P + Sbjct: 137 GRRMAYGLARDLGDAGYVVVSGLARGIDACAHEGALASG--TIAVQGGGVDIIYPSENTP 194 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 LA +L EQ G +SE P+ + P A +FP RNRII+GL+ +VVEAA++SGSL+TAR AL Sbjct: 195 LAMTLAEQ-GLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAAIKSGSLITARDAL 253 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + + G + LI+ GA LV E+++E L P + P Sbjct: 254 DLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLP 313 Query: 302 DQQDV-------ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 A ++L + TP + + G P +V T L +LEL+G I Sbjct: 314 SPPPERRNLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGRE 373 Query: 355 PGGYVRLRR 363 PGG + +R Sbjct: 374 PGGVIIKKR 382 >UniRef50_C6D2Y2 DNA protecting protein DprA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2Y2_PAESJ Length = 371 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 109/359 (30%), Positives = 172/359 (47%), Gaps = 8/359 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFLSFPRK---SIE 61 + L S + + + ++D G QA+ + E Sbjct: 13 IMLHECSGIGWHTVQKAVAH-KAWENVDGKSEADWMAIGFGRAQAEAAARRWNEPYDWPE 71 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 S ++ +I E YP +L P L+ G++ L +A+VG+R S Y Sbjct: 72 SPYLRAQKLGAAVITPYDEEYPEELHRIPQPPWVLYALGKVELLKRPSIAIVGTRNPSAY 131 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G E L+ RG+T+ SGLARGID AH+AAL+ +G +IAVL + ++ +P + Sbjct: 132 GRHTALSLSEELSRRGLTVVSGLARGIDSKAHEAALRGHGSTIAVLASPVDHCYPPENRS 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ + G ++SE P+ FP RNR+I+GLS G +VVEAA SGSL+TA AL Sbjct: 192 LYQQIV-REGLILSESPVGSSLHPGMFPLRNRVIAGLSLGTIVVEAAKGSGSLITADQAL 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GR+VFA+PGPI +P SEGP+ LI++GA LV+ + ILE + L + S Sbjct: 251 EMGRDVFAVPGPISSPKSEGPNSLIREGAKLVSSADHILEEYSWLEGKLAALTKPKPASA 310 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ +++ + D ++ + + P + L+ L + I PG Sbjct: 311 VAASMSAEEQKIIDLLRDRPLTINELHQLTMIPFGHLSALLINLCIKRKIEQQPGAVYI 369 >UniRef50_A1TWN3 DNA protecting protein DprA n=5 Tax=cellular organisms RepID=A1TWN3_MARAV Length = 405 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 136/383 (35%), Positives = 187/383 (48%), Gaps = 21/383 (5%) Query: 1 MVDTEI-------WLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQ 50 M D E WL L + RI V + I A L+ GL + Sbjct: 17 MSDQEFLQTPAGQWLLLSLLPRFGIPLRERILGSVDTLTDILPLNAATLRAMGLGGDAVE 76 Query: 51 RFLSFPR--------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 +++ + ++ YP L + P L+ G + Sbjct: 77 AIVAWQAGELSQGVIARALDIYRQCRERGIGVLGQGQAPYPECLRHIHNAPLVLYTLGNV 136 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L QL VVGSR + G R F L+ RG+ ITSGLA GIDG AH AL Sbjct: 137 ELLQRDQLGVVGSRNATRAGLDHARQFSAELSRRGLLITSGLALGIDGAAHAGALDAGYP 196 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AV+G GL+ ++P +H LA ++E G +VSE+P A FP+RNRIISGL++GV Sbjct: 197 TLAVVGCGLDRLYPAQHRNLAHRIIE-NGLIVSEYPPGTQARAAYFPQRNRIISGLARGV 255 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVEA+LRSGSL+TAR ALEQGREVFA+PG + +P + G H LI+QGA LV +++E Sbjct: 256 LVVEASLRSGSLITARTALEQGREVFAIPGSVHSPVARGCHQLIRQGARLVETANDVMEE 315 Query: 283 LQ--FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + P PE + S D + + +G + D + G P +++ Sbjct: 316 LGTWWSMQAQPAEPEATENSSDLSFLDSREIAVFEALGYDPQSTDALGLATGLPADQLLQ 375 Query: 341 QLLELELAGWIAAVPGGYVRLRR 363 LL LEL G A PGGY R R Sbjct: 376 SLLILELEGLAHACPGGYQRTGR 398 >UniRef50_A4BK91 DNA processing chain A n=1 Tax=Reinekea blandensis MED297 RepID=A4BK91_9GAMM Length = 368 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 188/365 (51%), Gaps = 15/365 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------ 56 D WLR + I +L ++ + + + + L Sbjct: 4 DELAWLRWVLIPNLGLKRSHQLLNLIDSPQALFLTPDRWP-LPESVRATIREMNLLGEQH 62 Query: 57 --RKSIESSLCWLEQPN-HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + L W +Q + HHL+ D P L D P L+V+GE L+ Q+ +V Sbjct: 63 PVHRRALEQLSWRDQHDSHHLLFPDHPDMPTSLSELYDAPLVLWVKGERSVLNQTQVGLV 122 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR S R R + L+ G+ +TSG A+GID H A + +G ++AVLG G++ Sbjct: 123 GSRHASPNALRHARTLSQHLSAAGLVVTSGGAKGIDTACHTAVVSRHGATVAVLGCGIDV 182 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P+ + +L + + G LVSE+PL P +FPRRNR+IS LS V V+EA+ +SGS Sbjct: 183 IYPKNNRQLFEDI-ARDGCLVSEYPLGTTPRPGHFPRRNRLISALSTVVGVIEASPKSGS 241 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA ALEQGR+VFA+PG IGNP S G H LI++GA L+ ++IL++L + + Sbjct: 242 LITAMHALEQGRDVFAMPGDIGNPNSAGCHQLIQEGASLLCSADDILKHLDW----RNSS 297 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 +S +D+ +L + + P+D++A P +++ +LELEL G I Sbjct: 298 APSSSSRLTLEDLTPVQHSILETLSSDQHPLDMLAYHLQVPAHQLLEPVLELELRGLIEQ 357 Query: 354 VPGGY 358 PGGY Sbjct: 358 QPGGY 362 >UniRef50_Q3BNK4 DNA processing chain A n=20 Tax=Xanthomonadaceae RepID=Q3BNK4_XANC5 Length = 381 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 133/356 (37%), Positives = 191/356 (53%), Gaps = 18/356 (5%) Query: 22 VRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 ++ S + A + G QA +++E+ L W EQP HHLI Sbjct: 25 RKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQGPDPQALEAGLRWCEQPGHHLIGWC 84 Query: 79 SEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGV 138 YP L + P ALFV+G + L +AVVGSR+ + G R F +LA G+ Sbjct: 85 DPDYPALLRHIANPPMALFVDGAPNVLWHPGVAVVGSRSATAGGRDHTRAFASSLACAGL 144 Query: 139 TITSGLARGIDGVAHKAAL-QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +I SG+A G+D +AH+AAL Q +G+++AV+G G++ +P RH L + E+ GA+VSE+ Sbjct: 145 SIVSGMAAGVDAIAHEAALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAER-GAVVSEY 203 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 P+A +FP RNRII+GL+ G LVVEAA+RSG+L+TAR A E GREVFALPG + NP Sbjct: 204 LPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGALITARLAAEAGREVFALPGSLHNP 263 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD------------ 305 + G H LI+QGA L EP +++E L L A +P + Sbjct: 264 LARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRKRLAAPTELPSKATTSAGAGPA 323 Query: 306 -VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + L +G + TP+D + +R G V + + LL +EL G + G Y R Sbjct: 324 RSDPDYQRLWQALGHDPTPMDSLVQRTGLTVAALSSMLLIMELEGDVVTEHGRYTR 379 >UniRef50_C0BIU6 DNA protecting protein DprA n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BIU6_9BACT Length = 365 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 13/367 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E L L S+ + + R+ I Q G+ + S+ Sbjct: 1 MNRLEACLLLESLPGMGWNRAQRMVTHFGSPEAIFLAKHQDWESVEGIGEKGCNALKSWK 60 Query: 57 R--KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + S E ++ + + YP L D P LF +G L F +++VG Sbjct: 61 KGLLSAEKKAREIKTLGIQCLFFGTPEYPLALSFCADAPLVLFYKGTLSFQDRFIVSIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R ++ +G + TLA I SGLARGID +AH+AAL+ N ++A L + + I Sbjct: 121 TRQNTPHGRAFCEELIHTLAPFNPIICSGLARGIDIIAHRAALKANLDTVACLAHSFDRI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A+ + E+ GALV++F NFPRRNR+I+G++ +V+E+A++ GS+ Sbjct: 181 YPYEHHKTASEI-EKKGALVTDFLPGAVFNRANFPRRNRLIAGMAHATVVIESAVKGGSM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLPDA 293 TA A + GRE+FA+PG + S G H L+ +Q A L+T+P+EI+ L + Sbjct: 240 NTADLAHQYGRELFAVPGRPSDLKSGGCHQLLFQQKAQLLTDPQEIVNTLGWN----KQV 295 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + P D+ +L E +D +A G V + L+++E+ G + Sbjct: 296 VTKAIQKPLFVDLTEEERQLFTQFSKEGKIHLDHLAFSVGIKVSTTASLLMQMEMKGMVR 355 Query: 353 AVPGGYV 359 A+PG Y Sbjct: 356 ALPGKYF 362 >UniRef50_B4RPY1 DprA n=31 Tax=Neisseriaceae RepID=B4RPY1_NEIG2 Length = 398 Score = 326 bits (837), Expect = 6e-88, Method: Composition-based stats. Identities = 123/393 (31%), Positives = 179/393 (45%), Gaps = 31/393 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-- 59 + WL+L + + + + + + +Q +R ++ Sbjct: 7 DERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQVAPAVRHKHALEAWRNAEKR 66 Query: 60 ------IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 E++L W + L+ E +P L P LF+ G + LH A+V Sbjct: 67 ALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSAAIV 126 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + R + F L +G+ SG+A GID AH+ AL+ G +IAV G G++ Sbjct: 127 GSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDTAAHQGALEAEGGTIAVWGTGIDR 186 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P + LA + E+ G +VSEFP+ P A NFPRRNR+I+ LS+ LVVEAAL SGS Sbjct: 187 IYPPANKNLAYEIAEK-GLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALESGS 245 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP-- 291 L+TA A E GREV A+PG I NP S+G H LIK GA L ++IL L Sbjct: 246 LITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQNTGAS 305 Query: 292 --------------------DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERA 331 P + + +L +G + DV+A + Sbjct: 306 SYSINKDTPDTGRRTVQTAYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDVLAGQL 365 Query: 332 GQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 P ++ LLELEL G +AA+PGG + R Sbjct: 366 AMPAADLYAALLELELDGSVAAMPGGRYQRIRT 398 >UniRef50_A8SZ78 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SZ78_9FIRM Length = 360 Score = 326 bits (836), Expect = 7e-88, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 181/366 (49%), Gaps = 13/366 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLSFPRKS 59 D ++L ++ + + +A + + Q LT +Q + + + Sbjct: 3 DDELLYLWYGMMNRMVHTQKIELAFRFGGIRGLWETSEKVLQESLTKKQFEMVMENRTEH 62 Query: 60 IESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAVVGSR 116 LE + + + YP +L D P LF G+++ L + +AVVG+R Sbjct: 63 AVLEYRNRLEAGHITYVYPGHDCYPGKLYDIPDPPMLLFAAGDINVLKDMAPAVAVVGAR 122 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG ++ GVTI SG+A GIDG AH+AAL G ++AVLG+G+N +P Sbjct: 123 KASVYGRTMADRISADVSAAGVTIVSGMALGIDGTAHRAALSGGGKTVAVLGSGINVPYP 182 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + + S++ GG +VSE LDV P A+ FP RNRIISG+S GVLVVEA +SGSL+T Sbjct: 183 RENYDIYRSIVNGGGVVVSESGLDVAPEAFRFPYRNRIISGMSDGVLVVEAREKSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+V+A+PG + + GS G + LIK GA+ VT E+ILE L + Sbjct: 243 ADQALEQGRDVYAVPGRVTDTGSAGCNNLIKMGAMCVTSSEDILEELGIQTVKGQFLNKK 302 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 +A ++ + V E +D + AG V E L ELE + + Sbjct: 303 L--------LAPAEKKVYSCVRLESRHIDDICFEAGMTVSETAQILFELEKKRLVKQLVR 354 Query: 357 GYVRLR 362 Y Sbjct: 355 NYYCRA 360 >UniRef50_C7RDQ0 DNA protecting protein DprA n=3 Tax=Anaerococcus RepID=C7RDQ0_ANAPD Length = 363 Score = 326 bits (836), Expect = 8e-88, Method: Composition-based stats. Identities = 113/366 (30%), Positives = 181/366 (49%), Gaps = 12/366 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-GLTLRQAQRFL-SFPRKS 59 EI L L I L ++ + LT + + + ++ Sbjct: 6 TKNEIILYLNYIY-LNNQTILDLYEK-TSFEDFFDKDRAYYDFLTDKIYGKIFDNESLEA 63 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE-LHALHSFQLAVVGSRAH 118 S L L + ++ + E YP LL D P L+ +G+ +A VGSR Sbjct: 64 FRSYLDLLYEKDYKYVTLLDEAYPKNLLYIEDKPAVLYYKGDFDEEADKNSIAFVGSRKC 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + E++A G+T SGLA GID HKA L V +I V+G G++ I+P++ Sbjct: 124 TDYGRWACKNLAESIAMAGITTVSGLAYGIDATCHKATLDVGKRTIGVIGCGIDKIYPKQ 183 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ G ++SEFPL P+A+NFPRRNRIISG+S G +V+EA +SG+++T R Sbjct: 184 NRDLYRRI-EENGLILSEFPLGTEPIAFNFPRRNRIISGISLGTVVIEAKEKSGTMITVR 242 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 CALEQG+EVFA+PG I + S+G + +I++GA LV PE+I+E L + Sbjct: 243 CALEQGKEVFAVPGNINSIYSKGTNKMIQEGAKLVLSPEDIIEELDYMKDLDLGR----- 297 Query: 299 YSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 S D + +++ + + + D +A + + + L LEL +I + Sbjct: 298 RSLDYSKLDKTEAQVVRYIVNYPNSSADTIASGLDEEIDVINFLLTSLELKDYIENIGNN 357 Query: 358 YVRLRR 363 ++ Sbjct: 358 EFSIKE 363 >UniRef50_A6TJT8 DNA protecting protein DprA n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJT8_ALKMQ Length = 378 Score = 326 bits (836), Expect = 8e-88, Method: Composition-based stats. Identities = 93/375 (24%), Positives = 166/375 (44%), Gaps = 21/375 (5%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 W+ L + + R+ ++ I ++ G+ A+ + K Sbjct: 2 LYWIWLSEVKGIGPVMQKRLLAYLQSPKAIYTASSEELMNVPGIGCHLAEEITTSSLKRA 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + L N L+ E YP + P L+ G L +S + +VG+R S Sbjct: 62 QEILGMCNGLNIQLLTFHDERYPSRAKEYPLCPILLYYRGHLVE-NSIGVGIVGARRCSS 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG+ + + LA + + SG+A+GIDG AH + L+ G ++A LG+G++ +P+ H Sbjct: 121 YGKEIAKQAGQYLAQNNIPVISGMAKGIDGYAHISCLKAGGYTLAFLGSGVDICYPKEHD 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L A ++E GA++S++P + P FP+RN +IS S+ +LVVEA +SG+L+TA+ Sbjct: 181 ELMARIMES-GAVLSQYPPETKPKPQYFPKRNALISAWSEKILVVEAGAKSGALITAQYT 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN---------------LQF 285 + REV A+P I + +G + LIK+GA + PE+++ L+ Sbjct: 240 KQLKREVLAVPNQIYSQMGKGTNQLIKEGATIYLGPEQLINTEPVMNVEAKIIGDNGLKP 299 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + Q ++ + + + E ++ + L Sbjct: 300 VKGNKKRKAMEAMKIASPQVNTPTEQRVIDALFGTPKTMAQIVEETKLQQLVLLEVMTIL 359 Query: 346 ELAGWIAAVPGGYVR 360 EL G I+++PGG Sbjct: 360 ELEGKISSLPGGKWV 374 >UniRef50_Q3AB69 Putative DNA proccessing protein DprA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB69_CARHZ Length = 358 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 186/365 (50%), Gaps = 12/365 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M +++ +L L S+ Y + + I L++ G + + Sbjct: 1 MQNSDYYLTLASVY--YNQKLFHLIKEGIPVEEIVVNPVKTLKEFGFSPTEINSLTRKIS 58 Query: 58 K-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + E ++ + YP +LL D P LF G L L + + +VG+R Sbjct: 59 EFNPERVKEHCSNLGIKIVTFGEKRYPERLLHLYDPPVVLFCWGNLELLKTPMVGIVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R F E +A G+T+ SGLARGIDG AH+ A+ G ++AVLG+G++ +P Sbjct: 119 RASSYGLKVARAFAEEIAGAGITVISGLARGIDGEAHRGAVSA-GATVAVLGSGIDVPYP 177 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R + L ++ Q G ++SEF PL Y FP RNR+I+ L++G++VVEAAL+SGSL+T Sbjct: 178 RENENLYREII-QKGLIISEFLPGTMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLIT 236 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR ALE GREVFA+PG I +P S G + L+K GA + + E++E L FG + Sbjct: 237 ARIALELGREVFAVPGMITSPLSAGSNLLLKDGARIALKGTEVIEELGFGTLFSNSFAAQ 296 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 ++L + +E V+ +A R V EV+ ++ LE+ G++ G Sbjct: 297 RSKQEAF----GLAGKILEVLVNEDLTVEEIAYRLNARVSEVLREISFLEIKGFVKKQFG 352 Query: 357 GYVRL 361 G Sbjct: 353 GKFTR 357 >UniRef50_A9KH16 DNA processing protein n=7 Tax=Gammaproteobacteria RepID=A9KH16_COXBN Length = 308 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 178/298 (59%), Gaps = 10/298 (3%) Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 W PNHH++ D YP L D P L++ G+ L+ Q A+VGSR + G Sbjct: 21 EWTTAPNHHILTLDHPSYPTLLKEIPDPPKKLYIMGDPLILNQPQFAIVGSRNPTVTGCE 80 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + E L G ITSGLA GID +H+ AL+ G +IAVLG+GL I+PRRH RLA Sbjct: 81 IAQEMAEKLVQAGFHITSGLALGIDAASHRVALKAGGQTIAVLGSGLTNIYPRRHHRLAE 140 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + Q GALVSEFPL +PPL NFPRRNRIISGLS G LVVEA L SGSL+TA+ A EQ Sbjct: 141 QI-SQKGALVSEFPLTMPPLPTNFPRRNRIISGLSLGTLVVEATLGSGSLITAKLAAEQN 199 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REVFA+PG I NP S+G H LIK+GA LV +I+ L + E + S Q Sbjct: 200 REVFAIPGSIRNPLSQGCHALIKEGAKLVDSIGDIIAEL---------SYEATGASAPIQ 250 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +LL +G EVT +D + R+G V + LL +EL G+I + PGG +R++ Sbjct: 251 ALDKNEHKLLECIGFEVTSIDQLIARSGFSASIVASLLLRIELQGYIKSTPGGVIRVK 308 >UniRef50_A5EKR2 DNA processing chain A (DprA/Smf) n=7 Tax=Rhizobiales RepID=A5EKR2_BRASB Length = 372 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 124/364 (34%), Positives = 179/364 (49%), Gaps = 7/364 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLT-LRQAQRFLSFPRKSI 60 + LRL+ ++ + + + + + R + Sbjct: 13 TERRDRLRLIRSDNVGPRTFRSLLNHFGTARAALDRLPELARRGGAARVGRICTIDE--A 70 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 E+ L + L+ + YPP+L + D P L V G L +A+VGSR S Sbjct: 71 EAELDACLRQGVQLLAPEENGYPPRLASCEDAPPLLGVRGARETLMQPMIAIVGSRNASA 130 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 G ++ L G I SGLARGID AH+A+L ++AVL G + I+P H Sbjct: 131 AGLKFAGQLAHELGRAGFVIISGLARGIDQAAHRASLSSG--TVAVLAGGHDRIYPPEHI 188 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L +++E+ GA +SE PL P A +FPRRNR+ISG S GV+VVEAA RSGSL+TAR A Sbjct: 189 DLLGAIVERNGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGSLITARMA 248 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA--PENSF 298 EQGREVFA+PG +P + G + LIKQGA LVTE +I++ + + P A E+ Sbjct: 249 GEQGREVFAVPGSPLDPRAAGTNDLIKQGATLVTEAADIIQAVGPIMERPPSASLRESDE 308 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + +++A +G +D + +G + LLELELAG + GG Sbjct: 309 ELFAPAPESHDRDQIIALLGPTPVSIDDLIRISGLSPAVLRVVLLELELAGRLERHGGGM 368 Query: 359 VRLR 362 V L Sbjct: 369 VSLA 372 >UniRef50_Q21RP2 DNA processing protein DprA, putative n=7 Tax=Comamonadaceae RepID=Q21RP2_RHOFD Length = 409 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 125/403 (31%), Positives = 189/403 (46%), Gaps = 44/403 (10%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL S + + ++ + + ++ RQA + P + Sbjct: 4 DELAAWLRLTLSSGVGNEAARKLLVAFGLPAKVFEQSSSTLQQVVSARQATALRAEPPEL 63 Query: 60 I---ESSLCWLEQPNH-----HLIPADSEFYPPQLLATTDYPGALFVEG----------- 100 E + WL ++ YP LL D P L++ G Sbjct: 64 APLLEQTWAWLRDTGVGSGRRQIVVLGDANYPQSLLNIEDPPLMLYLLGAGEFMSNQAVA 123 Query: 101 --------------ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 +L + +AVVGSR + G R F + L G+T+ SGLA Sbjct: 124 TANKGQAATTSVVNKLALRLANSIAVVGSRNPTPQGAVNARQFAKALGLAGLTVVSGLAL 183 Query: 147 GIDGVAHKAALQVNGV------SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 G+DG AH+ AL ++AV+G GL+ ++P+RH LA + Q G L+SE+PL Sbjct: 184 GVDGAAHEGALDSLAPGSDRLATVAVVGTGLDRVYPKRHLALAHRI-AQNGLLISEYPLG 242 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 PPL NFP+RNR+I+GL++ LV+EAAL+SGSL+TAR + EQG++VFA+PG I + + Sbjct: 243 TPPLPANFPKRNRLIAGLAQATLVIEAALKSGSLITARLSAEQGKDVFAIPGSIHSTQAR 302 Query: 261 GPHWLIKQGAILVTEPEEILENLQFG--LHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G H LIKQGA LV +++LE ++ L D+ S LL +G Sbjct: 303 GCHALIKQGAKLVESAQDVLEEMRIDSGLTHALDSIAVDACSTGATGSFGTQAVLLDAIG 362 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + +D + R G + QL+ LEL G + +PGG + Sbjct: 363 FDPVGLDALQARCGIDTAGLQAQLMTLELDGLLVRLPGGLFQR 405 >UniRef50_C6BZD8 DNA protecting protein DprA n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZD8_DESAD Length = 402 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 120/397 (30%), Positives = 167/397 (42%), Gaps = 37/397 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--LQQTGLTLRQAQRFL--SFPR 57 + L L L I L ++ + R Sbjct: 6 EEYFACLALRYTPGLGPKSWGPILRHYPTAYDGLKDAVNWHSLKLASEKSSKAAQNEEWR 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++P +P L D P L+ G+ L + + +VGSR Sbjct: 66 PKAEKEYREAMRLEFGILPWTHPLFPDLLKELADPPTCLYYFGDPKLLSNPSVGIVGSRN 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI-HP 176 G + L+ G+TITSG A+GID AH+AAL G +IAVLG GL+ +P Sbjct: 126 SGRLGMEYASRLAADLSKSGLTITSGFAKGIDSCAHEAALHGVGSTIAVLGTGLDVDSYP 185 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 L +LE G ++SEFP P A NFP RNR+ISGLS GV+VVEA + SGSLVT Sbjct: 186 PDSDWLRRRVLES-GLIISEFPPGTKPFARNFPFRNRLISGLSIGVVVVEAEIASGSLVT 244 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR A EQGREV A+PGP G+ G LIK+GA LV +++L N++ L Sbjct: 245 ARLAGEQGREVMAMPGPSGDKSFAGCLKLIKEGAALVETADDVLMNIRHALDIEDISGQK 304 Query: 289 ----------------------WLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVD 325 P E + + D + P ++ + +D Sbjct: 305 SVAGAERKLPVKRDDKSSSPKAEDPAKNEPAVPAFDIDSLEPPEYDIAKALKSGGKLHID 364 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +A AG V +L +E+ G + PG Y LR Sbjct: 365 EIARAAGFDVSVAGAVILGMEVNGMVVRFPGMYYDLR 401 >UniRef50_B2U799 DNA protecting protein DprA n=16 Tax=Proteobacteria RepID=B2U799_RALPJ Length = 402 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 133/378 (35%), Positives = 193/378 (51%), Gaps = 17/378 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL + ++ I A L RQA+ L+ P + Sbjct: 26 TELAGWLRLTETPGVGPVAARQLLAAFGLPQDIFAQPYAALAKVLPERQARAVLAEPDDT 85 Query: 60 IESSLC----WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + + W+ +P + + YPP+LL D P L+ +G+ L + + VVG+ Sbjct: 86 LAALIECTVAWVNEPGNAIFTLADRGYPPRLLELPDPPTLLYTKGDASLLRAAAVGVVGA 145 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + G R F + L+ VT+ SGLA GID AH+ AL G +IAV+G GL+ ++ Sbjct: 146 RSATAAGIDNARAFSQALSAASVTVVSGLALGIDAAAHEGALAGPGSTIAVVGTGLDIVY 205 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P R+ LA + E G ++SE+PL + A NFPRRNR+ISGL++G+LVVEAA +SGSL+ Sbjct: 206 PARNRALAHRIAEA-GVIISEYPLGMGARAENFPRRNRLISGLARGLLVVEAAAQSGSLI 264 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A EQGR+VFA+PG I +P ++G H LIKQGA LV +IL+ L +G P Sbjct: 265 TARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWGRAAAPAKRA 324 Query: 296 NSFYSPDQ----------QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + LL +G + +D + ER GQ + QLL L Sbjct: 325 TRAATAQAPAGAPVTVAGPAPSASEAALLDALGFDPVDLDTLCERTGQGAAALSAQLLAL 384 Query: 346 ELAGWIAAVPGGYVRLRR 363 EL G + PGG Sbjct: 385 ELDGRVERRPGGRFLRLP 402 >UniRef50_B0MDM2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDM2_9FIRM Length = 359 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 178/365 (48%), Gaps = 10/365 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS-FPR 57 M + W S+ + +I V + + + L RQ + FL Sbjct: 1 MNEKLSWFWFTSLLEINRKTQGKILSAVLHPEELRKLNEETAKSFLNKRQYRLFLETRDE 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I L++ I YP +L DYP +F +G +A+VG+R+ Sbjct: 61 SYICKKYEELKKQKTDYIIWKEPDYPQRLKQIYDYPFGIFRKGRPRES-RLVIAMVGARS 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG F + L+ RGV I SG+ARGIDG +H+ AL + VLG G++ I+P+ Sbjct: 120 CTLYGREMAGYFAKELSGRGVLIVSGMARGIDGASHRGALDAGAPTAGVLGCGIDRIYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H +L A +E+ G + SE+ V P ++ FP+RNRIISGLS G+ VVEA +SGSL+TA Sbjct: 180 VHQKLFAD-VEKQGVIYSEYGPGVEPFSFLFPQRNRIISGLSDGIFVVEAREKSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 C LEQ +E+FALPG + + S G H LI+QGA LV+ PE+IL ++ Sbjct: 239 DCGLEQNKEIFALPGNVTSDVSRGCHRLIQQGAKLVSGPEDILNEFPKF-----RVFSHN 293 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 D+ +A + + E ++ +A A PV E VT L L+ G + Sbjct: 294 VCQFDKNSLARGEKMVYDVLSLEPKCLEQIASEARLPVTETVTSLYYLKRQGLAEEILKN 353 Query: 358 YVRLR 362 Y ++ Sbjct: 354 YYIIK 358 >UniRef50_A3I2Y9 Smf protein DNA processing chain A n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2Y9_9SPHI Length = 376 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 11/366 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP----- 56 + ++ L S + + I + + + T + ++ LS Sbjct: 10 EELRYFIALWSAPKIGPGILKAIIAYSGSAKRFFEIPKGRAAKTPKVGEKLLSIRNQEKS 69 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + L E + ++ + +P + A D P F +G+ + +VG+ Sbjct: 70 LLQKADDLLELCESKGYRILTSLHPDFPKRFKAQEDSPSLFFCQGKADFNAERTVGIVGT 129 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+ R E L+ TI SGLA GID AH+AALQ N ++A++G+ + I+ Sbjct: 130 RSATAYGKAATRKIIEDLSVYQPTIISGLAYGIDIEAHRAALQENLPTVAIMGSPIGQIY 189 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + A S+L G L+SE+P NFP RNRII+GLS ++VVEAA + G+L+ Sbjct: 190 PSVHRKTAESMLLNKGGLISEYPPGGKMAPGNFPARNRIIAGLSDALIVVEAAEKGGALI 249 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAP 294 TA A ++VFA+PG + +P SEG + LIK+ A + T P +I E L + P Sbjct: 250 TAEIAYSYDKDVFAVPGNLQSPFSEGCNHLIKKMKANIYTGPNDIAEALFW---TKPGEV 306 Query: 295 ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + S D ++L + + +D ++ + P+ ++ ++LL LE G + + Sbjct: 307 KASKPKLDFSSRDAEEVKILKILQENGEAGIDEISFQTEIPIGQLSSKLLALEFEGIVKS 366 Query: 354 VPGGYV 359 +PG Sbjct: 367 LPGKKY 372 >UniRef50_A5CDZ7 DNA processing protein n=7 Tax=Rickettsieae RepID=A5CDZ7_ORITB Length = 386 Score = 324 bits (830), Expect = 4e-87, Method: Composition-based stats. Identities = 108/369 (29%), Positives = 171/369 (46%), Gaps = 14/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL ++ + V L + + + Sbjct: 16 DETIYTLRLARSENVGPKTFFELIRLFGSAKIALQNVA-YFSLKGGKRKPIKIYTNSEAL 74 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L + N L+ Y LL D P + +G++ L+ LAVVGSR S Sbjct: 75 QEIEVLRKFNAFLLTHHHSEYSKLLLHIPDPPPVIIYKGDIKLLNHKILAVVGSRNASLN 134 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + + + L + I SGLARGID AH++AL +IAV+ G++ I+P+ + Sbjct: 135 GVTFTKNIVKKLVDNKIVIASGLARGIDTAAHQSALPS---TIAVIAGGVDHIYPQENIN 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +++E P+ PP++ +FP+RNRII+G+S G LVVEA L+SGSL+TAR L Sbjct: 192 LYHKI-ANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKSGSLITARLTL 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E RE+FA+PG +P +G + LIK GA LV + E+I+E L + + Sbjct: 251 EYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFT 310 Query: 302 DQQDV---------ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 +D + + ++V+ + P+ V +LELELAG +A Sbjct: 311 QYKDHGSYQSTTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVA 370 Query: 353 AVPGGYVRL 361 G + + Sbjct: 371 RCLGNKIVI 379 >UniRef50_C8Q1F9 DNA protecting protein DprA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q1F9_9GAMM Length = 409 Score = 324 bits (830), Expect = 5e-87, Method: Composition-based stats. Identities = 131/398 (32%), Positives = 188/398 (47%), Gaps = 38/398 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFL-----SF 55 + L L + +L ++ Q GL +RF S Sbjct: 12 QQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASR 71 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + +L L Q + ++ + YP QL D P L +G L AL QLA+VGS Sbjct: 72 TSQFLHDTLLELSQGQYGVVFDNDPLYPTQLKNIYDPPPLLLYQGNLSALSQPQLAIVGS 131 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNG 170 R S + E+ + LA G+ ITSG+A GID AH AL G +IAVLGNG Sbjct: 132 RKPSPHAEKIAFDMAQYLAHEGLWITSGMAEGIDKQAHLGALSLQMTATQGGTIAVLGNG 191 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + +P+ HA L A ++ GG ++SE D+P Y+FPRRNR+++GLS LVVEAA + Sbjct: 192 IKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLSLATLVVEAAAK 251 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SGSL+TAR A EQG++VFA+P I N ++G H LI++GA LV P +ILE+L + Sbjct: 252 SGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPI 311 Query: 291 PDAPE-------------------------NSFYSPDQQDVALPFPELLANVGDEVTPVD 325 A E +P DVA LL + +D Sbjct: 312 VKATEVETAPIVAQAVSNSPQLPSESAQNTQPHQAPLAMDVAPHLQTLLNQLDWVGQDLD 371 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + ++ + ++ L+ELEL G + G Y+R R Sbjct: 372 SLVDKTRTDIATLMGWLIELELMGLVMQRGGLYMRCRP 409 >UniRef50_A8SI17 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SI17_9FIRM Length = 375 Score = 324 bits (830), Expect = 5e-87, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 151/366 (41%), Gaps = 10/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WL L + ++ + F + E Sbjct: 15 DPLLCWLWLSQVLGPASLHAGKVLDAFGGAQEAWEARETEEFRQAAGDTAFKRAAQLDAE 74 Query: 62 S---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRA 117 S + + ++P D YP D P L+ G+ L+ + +VGSR Sbjct: 75 SFHTLVMQCDALRVRILPFDDPDYPLAFSRIPDMPLVLYCTGDPRWLNEPGTVGIVGSRK 134 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG LA G I SGLA G+D H+AA++ + +IAV+G ++ +P Sbjct: 135 PTEYGLNAAADIGGELAKNGAVIVSGLADGLDSAGHRAAVKNDCPTIAVMGVPIDRTYPA 194 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +A L + E+ G ++SE+P + N F +RNR+I+ LS VLVVEA +SG++ T Sbjct: 195 ANAALRQQI-ERKGCVISEYPPYSEYVGPNCFLQRNRLIAALSSAVLVVEAREKSGTMST 253 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A G+ V+A+PG I +P S G + L++ G L + Sbjct: 254 VAHAERYGKPVYAVPGSIYSPNSAGTNGLLRDGRARAVAGA----ADLLAALGLHTRQAS 309 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ +LA +G + ++ + G P+ ++ L++LEL G + PG Sbjct: 310 PAAAKQPAPLSDTERRVLACIGPKPVGIEELCVSTGLPMSALLGTLMKLELTGRVYKQPG 369 Query: 357 GYVRLR 362 LR Sbjct: 370 QRYVLR 375 >UniRef50_A6P2C9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2C9_9BACE Length = 408 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 103/400 (25%), Positives = 161/400 (40%), Gaps = 42/400 (10%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + W+ L + + R+ ++ GLT Q + L Sbjct: 1 MAALKYWIWLTTRRGMTPLQTFRLLDHFGTPEAAYFADRKEYRLCGLTDWQQRTLLDKSL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSR 116 E L ++ ++ YP +L + P L+V+G+L + VVG+R Sbjct: 61 DGAERILGDCDRLGIRILTIQDAEYPERLRQIENPPCVLYVKGKLFPFDELVTVGVVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+ LA G + SG+ARG+D A + AL+ G ++VLG G++ ++P Sbjct: 121 RPTEYGKIMAGRLGMELARGGALVVSGIARGLDAAALRGALKGGGSVVSVLGGGIDVVYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L + GAL+SE+P +FP RNRIISGLS GV VEA SG+L+T Sbjct: 181 AENRWLYEDVAAA-GALISEYPPGTENKGEHFPIRNRIISGLSLGVAAVEAEEHSGTLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPE 295 R AL+QGR+ FA+PG P S G + LI++G A LV +IL + L PE Sbjct: 240 MRLALDQGRDAFAVPGNADAPMSRGTNLLIQRGEAKLVLSGWDILCEYEQLLPGRVSRPE 299 Query: 296 NSFYSPDQQ------------------------------------DVALPFPELLANVGD 319 + + ++L + Sbjct: 300 PLPVQVEAARLEVPEPPQEPERQETVTAETVDKPDEMAYITLEDGALTDDERDILLALEG 359 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 D + E P V + L L++ G++ G Sbjct: 360 RGLRTDDLVELTQIPARRVSSALTMLQIHGYVEEKAGRRF 399 >UniRef50_Q97I69 DNA uptake protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I69_CLOAB Length = 354 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 171/363 (47%), Gaps = 16/363 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M D ++W +L + + I Q++ F + I Sbjct: 1 MYDNDLWFA---TINLPYRQKLELLRIYKTSDEILYNFK-----NSELIQKY-KFDIEKI 51 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAH 118 +++ ++ + + YP L D P LF G + L+ +A+VGSR Sbjct: 52 NYIKDEMKKSGMKIVFWNDDDYPKVLKNYDDMPYGLFYMGNIKKLNELNYNVAIVGSRRC 111 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG+ + ++ G+ I SG+ARGID AHK L+ NG + AVLG G + I+P+ Sbjct: 112 TQYGKDITTIISREISINGIGIISGMARGIDTYAHKICLENNGYTCAVLGCGADVIYPKE 171 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ + G ++S++ + PL YNFP RN+IISGLS VLV EA ++SGS++TA Sbjct: 172 NKNLYCQII-RNGCIISQYKPNTKPLPYNFPIRNKIISGLSNLVLVTEADIKSGSIITAS 230 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQG++V A+PG + + S G + LI+ GA ++ + +++ L F + Sbjct: 231 SALEQGKDVGAVPGSVFSKMSRGTNKLIQDGAHVIKDIDDVFGILNF----QKINFKKIR 286 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + ++ V D+ VD + + E+ L E++L I + G Y Sbjct: 287 NNSSYSSMPENQRQIYDLVSDKPIHVDDIKRCLNIDIQELYELLFEMQLKNKILCLSGSY 346 Query: 359 VRL 361 Sbjct: 347 YVR 349 >UniRef50_A9IU37 DNA processing chain A n=5 Tax=Bartonella RepID=A9IU37_BART1 Length = 404 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 117/379 (30%), Positives = 176/379 (46%), Gaps = 23/379 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ ++ + + + A + + A + E Sbjct: 17 QRLSWLRLLRSENIGAVSFRNLIDYYKTAENALAALP-ELSRKGGGAASLKIASLEDAEK 75 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + E+ I YP L T P + V+G + + ++GSR S G Sbjct: 76 EIQEAEKLGVRFIGMGEPDYPAFLKVTEARPPLIAVKGNVLIFQKTSVGIIGSRNASAAG 135 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ F L SGLARGID VAH+A+L+ ++AV+ G+N I+P + +L Sbjct: 136 KKLTAQFAHFLGEADFVTISGLARGIDSVAHQASLKTG--TVAVMAGGINHIYPPENKKL 193 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ GGA++SE P+ P A +FPRRNRII+ LS G+LVVEAALRSGSL+TAR A E Sbjct: 194 YEDIIANGGAIISEMPISWKPRAIDFPRRNRIIAALSLGLLVVEAALRSGSLITARQAAE 253 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP-------- 294 GR +FA+PG +P S G + LIK GA+L T P +I+E L + LP++ Sbjct: 254 MGRLIFAIPGSPLDPRSVGTNNLIKDGALLTTHPSDIIETLTPLISPLPNSQLNFFEEPS 313 Query: 295 ------------ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 P +L+ + +D ++ +G +P + L Sbjct: 314 SLKIEKENFNSAYEKNAHPSLTGDDAARAAVLSALSTTPIDLDTLSIHSGVSLPTLYLLL 373 Query: 343 LELELAGWIAAVPGGYVRL 361 +ELELAG + GG V L Sbjct: 374 VELELAGKLIRHSGGCVSL 392 >UniRef50_Q135I2 DNA processing protein DprA, putative n=61 Tax=Alphaproteobacteria RepID=Q135I2_RHOPS Length = 422 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 172/364 (47%), Gaps = 8/364 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ ++ + + L + A+ Sbjct: 61 QRIDWLRLIRADNVGPRTFRSLVNHFGSARAALE-RLPELARRGGAARAGRIPSEDEARR 119 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL---HSFQLAVVGSRAHS 119 + + L+ YPP+L D P L V AL +A+VGSR S Sbjct: 120 EIDGGHRLGVELVAPGEPGYPPRLALIDDAPPLLGVHCVPDALAEMQRPMIAIVGSRNAS 179 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G ++ L G + SGLARG+D AH+A+L ++AVL G + I+P H Sbjct: 180 GAGLKFASELARDLGAAGFVVISGLARGVDQAAHRASLANG--TVAVLAGGHDKIYPPEH 237 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L ++E GA +SE PL P +FPRRNR+ISG + GV V+EAA RSGSL+TAR Sbjct: 238 EDLLLDIVEARGAAISEMPLGHVPRGKDFPRRNRLISGAAVGVAVIEAAYRSGSLITARR 297 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP--ENS 297 A +QGREVFA+PG +P + G + LIKQGA L+T ++I++ + + + P E Sbjct: 298 AADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSADDIIQAVAPIMDRPVELPGREPE 357 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 +P + A ++ +G +D + +G P V T LLELELAG + GG Sbjct: 358 HPAPASEPDASHRGRIVNLLGPSPIGIDDLIRLSGIPPAVVRTVLLELELAGRLDRHGGG 417 Query: 358 YVRL 361 V L Sbjct: 418 LVSL 421 >UniRef50_A0KBJ9 DNA protecting protein DprA n=36 Tax=cellular organisms RepID=A0KBJ9_BURCH Length = 475 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 125/396 (31%), Positives = 176/396 (44%), Gaps = 39/396 (9%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR--FLSFPRKSIE 61 WL+L L + + + + A + R ++ Sbjct: 64 LRAWLQLAHAPGLSPAVLQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLD 123 Query: 62 ----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++L WL+ P + L+ YPP+L D P L+V+G L LH+ LAVVGSR Sbjct: 124 TRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPPLLYVKGRLDLLHARGLAVVGSRH 183 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G F L+ G+TI SGLA GIDG AH+ L ++AV+ G + ++P Sbjct: 184 ATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPA 243 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 RH LA + GA+VSE+PL P A +FP+RNR+I+ L+ G LVVEAA RSGSL+TA Sbjct: 244 RHRALAHEIAAH-GAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITA 302 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP------ 291 R A E GR+VFA+PG I P ++G H LI+ GA L P ++LE G Sbjct: 303 RLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAM 362 Query: 292 --------------------------DAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 A +L +G + Sbjct: 363 RAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAAPPGTPSEQAVLTALGYGPVTYE 422 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +AE +G + LL LELAG +A+V GG Sbjct: 423 WLAEHSGLSNDVLHGALLALELAGRVASVAGGRFAR 458 >UniRef50_C5RLG6 DNA protecting protein DprA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG6_CLOCL Length = 344 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 169/346 (48%), Gaps = 5/346 (1%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE 80 + I V L + + E + +L + + ++ + + Sbjct: 2 KRELLEEYQCTKDIYEV-LTAYKNFEYNIKNIEPLDKSYCEEVIKYLAKNDIKIVKINDK 60 Query: 81 FYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLATRGVT 139 YP +LL D P LF +G++ L+ + +A+VGSR + YG + + L + ++ Sbjct: 61 NYPKELLNYDDMPSILFYKGDIEPLNKNENVAIVGSRNPTNYGIDVAEIITKYLCKKEIS 120 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 + SGLA+G+D V HK + N + AV+G+G++ +P + L ++ G ++SEFPL Sbjct: 121 LVSGLAKGVDAVVHKISCDKNNYTCAVIGSGIDVTYPYSNKELYKRII-NNGCILSEFPL 179 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 PL+YNFPRRNRIIS LSK ++VVEA+ +SGSL+TA L+QG+E+ A+PG I + S Sbjct: 180 HTKPLSYNFPRRNRIISALSKRIIVVEASEKSGSLITAGHGLDQGKEIIAVPGSIFSEQS 239 Query: 260 EGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 +G + LI GAI + + E L + + N+ + ++ + N+ D Sbjct: 240 KGTNKLISDGAIPFLSLDTLRETLSISIDKNENMCNNN--RDNTWSLSEVESRIFENLSD 297 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 VD + + ++ L E++ I + G Y + Sbjct: 298 SPIHVDDLISMVNIDINQIYKVLFEMQAKNLIYTLSGNYYAKKYTS 343 >UniRef50_C2LEB7 SMF family Rossmann fold nucleotide-binding protein n=4 Tax=Gammaproteobacteria RepID=C2LEB7_PROMI Length = 385 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 144/385 (37%), Positives = 217/385 (56%), Gaps = 25/385 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EIW+RL +S L + +++ ++ + ++ VL + GL+ +Q+ +F+ + Sbjct: 1 MDAREIWIRLNVVSRLPVNKAIKVVEYLQSLTQLNRKVLLECGLSEQQSHQFMRLQANCV 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +S+L WL++ L+ YP L + P LFV G L S Q+A++GSR + Sbjct: 61 KSTLKWLDKNESSLLTISDSDYPLLLKQISSPPLLLFVAGNKEHLKSTQIALIGSRDATQ 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG +W F + L TITSGLA+GIDGV H++AL+ +GV+IAVLG+GL I+P H Sbjct: 121 YGTKWATYFAQQLVKNKFTITSGLAQGIDGVGHRSALKHHGVTIAVLGSGLEQIYPSFHR 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 RLA + E G LVSE PPLA +FP+RNRIISGLS +L+VEA ++SGSL+TA A Sbjct: 181 RLAEQIKES-GVLVSEHLPMAPPLARHFPQRNRIISGLSSALLIVEAGIKSGSLITANYA 239 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L+QG+E+F LPG +G+ EG H L+KQGA L + P++I+E L WL + Sbjct: 240 LQQGKELFVLPGLLGDSHFEGNHQLLKQGANLASSPDDIMEYLNSSWQWLIFNHNDDLQD 299 Query: 301 P-------------------DQQDVALPFPE----LLANVGDE-VTPVDVVAERAGQPVP 336 + + + + +L +G + P+D++A ++G Sbjct: 300 EHIAEVGSAANKKESSNMPLEIEKLTPTQQQSINLILPLLGFDKAIPIDIIANKSGLSTS 359 Query: 337 EVVTQLLELELAGWIAAVPGGYVRL 361 ++ LLELEL +A V GGY+RL Sbjct: 360 DLAPLLLELELIEKVAIVAGGYIRL 384 >UniRef50_A8F3X8 DNA protecting protein DprA n=1 Tax=Thermotoga lettingae TMO RepID=A8F3X8_THELT Length = 339 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 167/362 (46%), Gaps = 25/362 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M EI L +++ +I S I Q + + I Sbjct: 1 MHPIEI-FALSYFGKFSIEEIQKIKETYNSVSEILKSDFFQGNERFK-----AHYDEGFI 54 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHS 119 + L +E N L+ SE YP L T P LF G + L S +AVVG+R + Sbjct: 55 QQQLKKIENFNVKLVDFWSEDYPELLKWTHSPPAVLFCLGNIQFLKDSRTVAVVGTRKAT 114 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + L+ G SG+A GID AH AL V G ++AVLG G++ +P + Sbjct: 115 GYGIDVTKKMVTDLSRAGFVTVSGMAFGIDSSAHSTALNVGGKTVAVLGTGVDVCYPVSN 174 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + +L + G LVSE+PL NFP RNRII+GL + +VVEA L SG+L+TA+ Sbjct: 175 KDIYEVIL-KNGCLVSEYPLGTKAAKQNFPARNRIIAGLCRATVVVEAPLNSGALITAKI 233 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A E GR+VF++PG I SEG +WLIK GA +T ++I E Sbjct: 234 AAEIGRDVFSVPGDIDRKTSEGCNWLIKMGATPLTHVDQIFEYYGVEFKK---------- 283 Query: 300 SPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 ++++ F ++ + VAER + EV+++L E EL G I+ G+ Sbjct: 284 ----EELSDNF---ISLFDSGPLLAEEVAERLKMDLSEVLSKLTEYELRGMISKTQSGHY 336 Query: 360 RL 361 Sbjct: 337 NR 338 >UniRef50_C8WWD3 DNA protecting protein DprA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD3_ALIAD Length = 366 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 105/374 (28%), Positives = 163/374 (43%), Gaps = 22/374 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTG-LTLRQAQRFLSFP 56 M D E+ + L + R+ G + QA R ++ Sbjct: 1 MGDAELAIVWSLCPGLAPSTLRRLVRAFGGIRPFHEARVADWTAYGGVDAAQASRMDAWR 60 Query: 57 RKS--IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL--HSFQLAV 112 R + LE ++ +E YP +L D P +FV+G L + Sbjct: 61 RAEPSADRLKLQLEHRGIFVLARGAEDYPSRLSDLPDPPMVVFVQGRKDLLAPQRATFGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG R +A R I SGLA G+D AH A L++ G ++AVLG G++ Sbjct: 121 VGTRRMTSYGMEAARWIAGEIARRDAVIVSGLAMGVDATAHAATLEMGGDTVAVLGCGID 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P + RL + G LVSE+P P ++FP RNR+I+ LS+ V+VV+A RSG Sbjct: 181 RCYPPSNRRLYDQI-ASTGTLVSEYPPGTPVRKHHFPERNRLIAALSEAVIVVQAGDRSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +L+TA+CAL+ GR+V+A+PGPI + S G + L+ GAI + +P ++ Sbjct: 240 ALITAQCALDLGRDVYAVPGPITSRASRGVNRLLFDGAIPLVDPNDLF------------ 287 Query: 293 APENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + + +A A + V LLE+ELA + Sbjct: 288 PEPADVEIAGSWKIPAHLEPCYRALARHQPIRAGELAAVADLDLGYVFGALLEMELACMV 347 Query: 352 AAVPGGYVRLRRAC 365 P G +R Sbjct: 348 TRHPDGTYHIRPNA 361 >UniRef50_C7H9Z9 DNA processing protein DprA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9Z9_9FIRM Length = 381 Score = 320 bits (820), Expect = 5e-86, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 157/369 (42%), Gaps = 14/369 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA-----VVLQQTGLTLRQAQRFLSFP 56 WL L + R+ + G Sbjct: 19 DPLLCWLWLANTLGAGSSHAGRVLDVFGGAQEAWENRDSDAFRKAVGSPAFARANLPDNT 78 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGS 115 + N ++P D YP D P L+ G+ L+ + +VGS Sbjct: 79 PAHYWAFARRCAARNIRILPYDDPDYPLAFSRIPDMPLVLYCTGDPLWLNEPGAVGMVGS 138 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + YG + LA G I SGLA G+D H+AA++ N +I VLG ++ + Sbjct: 139 RRPTEYGLQAAADLGSGLAKNGAIIVSGLADGLDSAGHRAAVKENCPTIGVLGVPIDRTY 198 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVLVVEAALRSGSL 234 P + L + EQ G ++SE+P + P+ N F +RNR+I+ LS ++VVEA +SG++ Sbjct: 199 PASNRELRKKI-EQKGCVISEYPPESGPVGPNGFLQRNRLIAALSSALVVVEAQEKSGTM 257 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 T A G+ VF +PG I +P S G + L+++G A V +P ++ L P Sbjct: 258 STVNHAERYGKPVFVVPGSIYSPNSAGTNALLQEGRAKAVCKPSDLFGVLGLRGAAAP-- 315 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + ++ +LA +G + V+ + +G P ++ L++LELAG + Sbjct: 316 ---AVVRSAPDPMSETERRVLACIGPKAKGVEELGAASGLPTGLLLGTLMKLELAGRVTC 372 Query: 354 VPGGYVRLR 362 +PG LR Sbjct: 373 LPGKRYILR 381 >UniRef50_C0GGN8 DNA protecting protein DprA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGN8_9FIRM Length = 361 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 169/360 (46%), Gaps = 12/360 (3%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFL-SFPRKSIESSLC 65 I L ++ I +L G+ + A+ L S E L Sbjct: 2 SEIKGLGSVTCRKLLQVFQTPEEIYRAAKGDLLSVAGIGEKTAEIILGSRSLSPAERILE 61 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 + + L+ + YP + D P L+ GEL S +AV+G+R + YG++ Sbjct: 62 KMARLEIKLLTIEDVCYPGEAANLADAPPVLYYRGELREDSS-GVAVIGARRCTAYGKKV 120 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + E LA V + SG+A+GIDG AH A + G ++A LG+GL+ +P H L + Sbjct: 121 AKEAAEFLAKNEVPVISGMAKGIDGYAHTACINAKGYTLAFLGHGLDLCYPPEHLELMEA 180 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 ++E GA++SE+P P FPRRN ++S S +LVVEA SG+L+TA+ A EQG+ Sbjct: 181 IVE-NGAVISEYPPGTPAKQVYFPRRNYLLSAWSHKLLVVEAGYNSGALITAKVAREQGK 239 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ- 304 EV A+P I N S G + LI GA + +P+++LE + + + + Sbjct: 240 EVLAVPNGIYNRESYGTNRLIADGAKIFIKPDQLLEMPRENVSVDRSVKQKRKSKVVAEI 299 Query: 305 ----DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +++ +G E ++ +A + + L +EL G + +PGG R Sbjct: 300 VSVVEDSAYERQIIELIGSEEVSIEKLALSFTENRKSFLEALSVMELEGKVKRMPGGMYR 359 >UniRef50_B2KBN5 DNA protecting protein DprA n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN5_ELUMP Length = 372 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 8/365 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 + ++L + + L D +R+ I + G++ A L Sbjct: 6 ERLARIKLNAFTYLRTDWAMRMIEVFGSAEMILKTSAKDLAAQGGMSEDTAANLLKEAHA 65 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++ + YP L D P L+V G L A ++A+VG+R Sbjct: 66 LDAEKEAELTNKAGGKILLLEDYEYPQSLKDIKDPPFVLYVRGTLEA-RGPKVAMVGTRL 124 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG R + F +A G + SGLARG+D V +A + +N + AV+G G+ +P Sbjct: 125 ITPYGRRCAKKFATEIAQAGCVVVSGLARGVDSVCQQAVVDINKPTWAVVGTGIGRCYPA 184 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + LA ++LE GGA++SE + PP A++FPRRNRIIS LS V+++E +RSG+L+TA Sbjct: 185 ENKALANAVLENGGAIISELSFNKPPNAFHFPRRNRIISALSSVVVIIEGKVRSGALITA 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE--NLQFGLHWLPDAPE 295 + A EQG+++ A+PG I + S GP+ LIK GA + E +I++ + + E Sbjct: 245 KLAAEQGKDILAVPGSIESEQSGGPNMLIKDGAHALLETRDIIDLIPFEERFGLNEEVFE 304 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D+ + L +G +D + E VP L E+E+ G + Sbjct: 305 KDSVQKEILDLTETEKQFLEVIGPGEHTIDDIVEALATDVPSAAAVLFEMEIKGVLMCKD 364 Query: 356 GGYVR 360 G Y R Sbjct: 365 GKYSR 369 >UniRef50_B8IZE6 DNA protecting protein DprA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZE6_DESDA Length = 442 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 122/417 (29%), Positives = 172/417 (41%), Gaps = 59/417 (14%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--LQQTGLTLRQAQRFLS-FPRK 58 + L L + L R+ ++ GL +QA + R Sbjct: 16 TEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRV 75 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YPP L D P L+ G+L L + AVVGSR Sbjct: 76 TARDEWDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRA 135 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + +G L+ GVTI SG+A GID VAH+AAL G SI VLG G++ ++P Sbjct: 136 TEHGRAVAAHMSRCLSACGVTIVSGMALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSV 195 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + ++ ++EQ G LVSEF PL +FP RNRIISG + GVLVVEAA RSGSL+TAR Sbjct: 196 NRKIF-GMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLVVEAASRSGSLITAR 254 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL------------------ 280 ALEQ REV+A+PGP + G L++QGA V E++L Sbjct: 255 LALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLG 314 Query: 281 --ENLQFGLHWLPDAPENSFYSPDQQDVALPFP--------------------------- 311 E + L +P+A + A P Sbjct: 315 DEEKIGPELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENL 374 Query: 312 -------ELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 LL + D +A V ++ L+ LE+ G + +PG Sbjct: 375 APAGRRAALLDCLRQRGPMQADDLACALDISVADLNVMLVGLEMLGQVCRLPGARYA 431 >UniRef50_A9BS71 DNA protecting protein DprA n=10 Tax=Bacteria RepID=A9BS71_DELAS Length = 405 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 136/389 (34%), Positives = 195/389 (50%), Gaps = 30/389 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS 59 + WLRL+ + R+ +I + +T QA + P++ Sbjct: 14 EELSAWLRLLLTPGVGRTTARRLLAACGGAQNIWSGPPAAWHGLVTAAQAHSLQTVPQRL 73 Query: 60 ---IESSLCWLEQPN----HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF---- 108 + +++ WL+QP H ++ YP LL T D P L V+G + Sbjct: 74 EQLVAATVQWLDQPASGQLHAVLALGHPQYPQALLQTEDPPLLLHVQGSERCMTGPGPWF 133 Query: 109 ----QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS- 163 LA+VGSR + G R + LA G+ I SGLA+G+DG AH+ AL+ + Sbjct: 134 PYPQSLAMVGSRGPTVQGAANARAMAQALAEAGLCIVSGLAQGVDGAAHEGALRAVLRTG 193 Query: 164 -------IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 IAV+G GL+ ++PRRH LA + G +VSE+PL P+A +FP+RNRII+ Sbjct: 194 AQAAPVTIAVVGTGLDQVYPRRHIGLARE-VASHGLIVSEYPLGTGPMAAHFPQRNRIIA 252 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 GLS+G LVVEAAL+SGSL+TAR A EQGREVFA+PG I P S G H L++QGA LV Sbjct: 253 GLSQGTLVVEAALQSGSLITARLASEQGREVFAIPGSIHAPQSRGCHALLRQGAKLVETA 312 Query: 277 EEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPELLANVGDEVTPVDVVAERAG 332 +++L+ LQ LP A + Q L + + +D + +R G Sbjct: 313 QDVLDELQGTAVRLPIAKPVPAAAAAAAAVQSAQDHENDATLRALAHDPLSLDELMDRTG 372 Query: 333 QPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + LLELEL G + +PGG + Sbjct: 373 MDAAALQAHLLELELEGRVERLPGGLFQR 401 >UniRef50_A5Z3L5 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L5_9FIRM Length = 333 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 11/323 (3%) Query: 45 TLRQAQRFLSFPRKSIESSLCW-----LEQPNHHLIPADSEFYPPQLLATTDYPGALFVE 99 + + S ++ +E LE+ ++ + YP +LL P LF + Sbjct: 17 NKKINNKRGSEYKEQLEKLKDKNYIKELEKQGIKVVSVNDRDYPAKLLPYDHRPEYLFYK 76 Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L +A+VG+RA S YG + R L+ GV I SG+ARGID + AL+ Sbjct: 77 GRLPDRDKPVVAMVGARACSNYGRKMARALARELSENGVQIISGMARGIDTYSQIGALEG 136 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 + AVLG+G++ +P + L +L+ GG ++SE+P P+A++F RNRIISGLS Sbjct: 137 GTPTFAVLGSGVDVCYPTENIELYNDILKNGG-IISEYPPGAGPIAWHFLLRNRIISGLS 195 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+VVEA +SGSL+T ALEQG++V A+PG +G S+G + LI+ GA ++T ++ Sbjct: 196 DKVIVVEAREKSGSLITVEWALEQGKDVMAVPGRVGEKLSDGCNCLIRAGAGIITGANDV 255 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVV 339 L ++Q+ + + S + L + + + + + G E+ Sbjct: 256 LNDIQYSGSKNENEKKQKEKS-----LEKDLALLYSGLRLQPKNIYELMNETGFKYEELT 310 Query: 340 TQLLELELAGWIAAVPGGYVRLR 362 LL+L+L G + Y Sbjct: 311 GMLLKLQLMGLVEQPSENYYSKA 333 >UniRef50_Q0FZT2 DNA processing chain A n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZT2_9RHIZ Length = 377 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 10/360 (2%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL ++ ++ + + + R R R +IE+ Sbjct: 21 WLRLYRSENVGPVTFRQLINRFGGAEAALEALPELAERGGR---RIEIADRGAIEAEFDR 77 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 ++ +P + P + G+ +A+VG+R S G + Sbjct: 78 AKKLGAVFACMGEPGFPSMFASDEHSPPVIARMGDPALFEQPAVAIVGARNASLSGIKLT 137 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + F L G + SGLARGID AH+AA+ +I V GL+ +P + L + Sbjct: 138 KRFAADLGAAGYVVVSGLARGIDAAAHEAAISTG--TIGVFAGGLDMPYPPENRSLMRRI 195 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 +++GG L+S P P A +FPRRNR+++ L+ G+LVVEAA RSGSL++AR A E GR Sbjct: 196 VDEGGCLISARPFGWEPRAKDFPRRNRVVATLALGLLVVEAAQRSGSLISARIANELGRL 255 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD---- 302 VFA+PG +P + G + L+K GAIL TE +++E L+ +S P+ Sbjct: 256 VFAVPGSPLDPRAGGSNKLLKDGAILATEAADVIEALRPLDEGRRSRGNDSLDEPEVLET 315 Query: 303 -QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + +G VD + E G V +LELELAG + G V + Sbjct: 316 FEEPAGDERDRIYEALGPTPVSVDDIVEHTGASPGAVQLVVLELELAGRLERQRDGTVSI 375 >UniRef50_UPI0001C373C7 DNA protecting protein DprA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373C7 Length = 422 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 104/422 (24%), Positives = 162/422 (38%), Gaps = 59/422 (13%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRFLSFPR 57 M +T+ W+ L + + ++ LT + +R S P Sbjct: 1 MDETKYWMWLSMVFGTGSRRIWEAMCLFTSAQEAFEMLTDGSVVLKLTENEWERLRSTPL 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSR 116 + + +I + YP QL + P L+ +G + L + + VG+R Sbjct: 61 SAAAKFVEKCRNDGVEVIGYSDKLYPSQLRHLFNPPAILYYKGNISCLTGTKTITTVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + S YG R C LA + I SG A GID H AA + V+G G++ +P Sbjct: 121 SASDYGMRAAETICSELAAKNFVIVSGFAVGIDIATHMAAAGRKRPTACVMGCGVDVDYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + + +L+ GG +SEFP P NFP RNRI++GL + LV EA+++SGSL+T Sbjct: 181 KPNQQFREKILQCGGVFISEFPPGTQPHPQNFPSRNRILAGLGRAALVFEASVKSGSLIT 240 Query: 237 ARCALEQGREVFALPGP-IGNPGSEGPHWLIKQGAILVTEPEEILENL------------ 283 AR A EQGR+V LP P I + G L++ GA EEILE Sbjct: 241 ARLACEQGRDVLVLPPPDIFSSRYSGNIQLLRDGAEPFYGAEEILELYKLGSPVEEEIRD 300 Query: 284 -------------------------QFGLHWLPDAPENSFYSPDQQ-------------- 304 L + Sbjct: 301 SIEAEYTGREAGIVWAGRTDIEADENEELPVKKTRKRPKKAKEEIPSVPEENRVADADDT 360 Query: 305 ---DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ ++ + D D + R E++T+L ELE+ G + ++PG L Sbjct: 361 DNDELTDIQQRIVTELRDGSLHADEICRRLDIDSAELMTELTELEIVGAVRSLPGKMYEL 420 Query: 362 RR 363 R Sbjct: 421 YR 422 >UniRef50_C0W9S1 DNA protecting protein dprA n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S1_9FIRM Length = 367 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 123/371 (33%), Positives = 181/371 (48%), Gaps = 14/371 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMV---RIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS 54 ++ L + L + R+A + +Q LT + AQ + Sbjct: 1 MEVYYMAALAHL--LGSRAALLGPRLAAYFGSAKEAFEASFEQVKASGILTEKGAQHYRK 58 Query: 55 F-PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + + + E + L+ YP L D P L+V+G+L L + LAVV Sbjct: 59 WYDPGLPQKIADYCEIAHISLLGIQESGYPASLREIADPPWVLYVKGKLPNLTA-YLAVV 117 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG F LA+ + I SG A GID AH+ AL G +I+VLG+GL Sbjct: 118 GSRKATGYGLSIAERFSRVLASEKIAIVSGGAYGIDAAAHEGALLGGGKTISVLGSGLAR 177 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P RH L + E GA++SEF PP+AY FP RNRII GLS GVLVVEAAL+SG+ Sbjct: 178 PYPVRHKGLFQRISET-GAVISEFSPFTPPMAYQFPMRNRIIVGLSSGVLVVEAALKSGA 236 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE-NLQFGLHWLPD 292 ++TA A ++GR+V+A+PGPI + S+G H LIK+GA LV +P+++L+ + Sbjct: 237 MITAHLAADEGRDVYAVPGPIESFTSKGTHALIKEGAHLVDDPQDLLDVYFPEDVPKGAH 296 Query: 293 APENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 A E S + L + G ++ + P+ V LL +E+AG + Sbjct: 297 AVELSLFETFPVPDRKKAEALYDFIKGGNGKQMEEIMAHFPWPLSFVSMLLLRMEVAGMV 356 Query: 352 AAVPGGYVRLR 362 G +R Sbjct: 357 RKSAGNRYLVR 367 >UniRef50_C9LHB6 Smf protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHB6_9BACT Length = 368 Score = 318 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 9/366 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T + L ++ + + I + + + A+ + E Sbjct: 8 TETLSLMTLGALPGVGLKTLRTILARYKSATAALEAFARGAEVCACSAENLAEARQ-WAE 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + E ++ YP +L D P LF G + + +AVVG+R + Y Sbjct: 67 AEMAYCEAHAVRILTMADADYPARLRTCDDAPPYLFYRGAANLNAKYVVAVVGTRNITEY 126 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G+ R C LA V + SGLA G+D AH+ AL N ++ VL +GL+ ++P H Sbjct: 127 GKDLCRHLCRDLADFSPDVLVLSGLAYGVDVHAHRQALAANLPTVGVLAHGLDRLYPSAH 186 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A ++L +GG L +E+P P F +RNRI++G++ V+VVE+ +R G+L TAR Sbjct: 187 RTTAIAMLNKGGLL-TEYPRLTVPEKGRFLQRNRIVAGMADVVVVVESGIRGGALATARL 245 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A + R V+A PG + S G + L++ G A L+T E++L + L E S Sbjct: 246 ARQYERPVYAFPGRASDEMSAGCNALLRDGRAKLITSAEDLLSDW---LGVKVKVQEASP 302 Query: 299 YSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + D+ +L+A + + +D +A A V + L +L + G++ +PGG Sbjct: 303 ATDLFADLTRNEQKLIAVLKQHDCRTLDQLAAEADLAHSVVASLLFDLNMRGFVKTLPGG 362 Query: 358 YVRLRR 363 RL R Sbjct: 363 AYRLVR 368 >UniRef50_C6XL72 DNA protecting protein DprA n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XL72_HIRBI Length = 373 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 127/361 (35%), Positives = 177/361 (49%), Gaps = 6/361 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWV-AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + L+L+ ++ ++ + + T + F IE Sbjct: 12 ERAKRLQLLRTPNVGPMTYAQLMSRFSGDIDAVLDALPNLTTRAGKHRD-FKLPSLSIIE 70 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + I D YP L A T P + V G++ A +A+VG+R S Sbjct: 71 REIDKAHKIGARFIAYDEADYPLPLNALTPPPPMICVRGKMEAFLKPGIAIVGARNASAA 130 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G + R LA G TI SGLARGIDG AH AALQ G +IAVL G++ I+P HA+ Sbjct: 131 GRKLTRDISHELAKSGYTIVSGLARGIDGEAHAAALQT-GHTIAVLAGGVDAIYPPEHAK 189 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++LE+ GA+VSE PL A +FP+RNRII+GLS VLV EAALRSGSL++AR AL Sbjct: 190 LYDAILER-GAIVSESPLGYIATAKDFPKRNRIITGLSMAVLVAEAALRSGSLISARVAL 248 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGREV A+PG + + G + L++QGA LV E+++ L+ + + PE + Sbjct: 249 EQGREVLAIPGSPLDERTRGSNGLLRQGAWLVENAEDVIAALENSIPPMLAEPEAPTFET 308 Query: 302 D--QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L + T +D + P+ EV L ELEL G GGYV Sbjct: 309 LSMIDVSLSTIQSLTMALSPTPTHIDELVRVVRAPLREVNAALTELELDGIAQTHAGGYV 368 Query: 360 R 360 Sbjct: 369 S 369 >UniRef50_B6WSE7 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE7_9DELT Length = 432 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 121/416 (29%), Positives = 174/416 (41%), Gaps = 58/416 (13%) Query: 1 MVDT---EIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFL 53 M D E W L L L R+ G+ +A Sbjct: 15 MDDRARREYWAGLALRHCRGLGARSCCRLLRHFGSAFAALEGRERWADAGVDRGKAAEIS 74 Query: 54 S-FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + R + + + + ++ YP L D P L+ G+L L + +AV Sbjct: 75 TGSWRVTARTEWDAVRDLDAVIVQWHEAAYPALLRTLPDAPVLLYCMGDLSLLANPAVAV 134 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +GSR + G+ A+ G+T+ SG+A GID AH+AAL G SIAVLG G++ Sbjct: 135 IGSRKATPRGQALAGHMAGAFASWGITVVSGMAWGIDKAAHEAALDRTGSSIAVLGTGID 194 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + RL + + G LVSEF +P L NFP RNRIISGLS GV+VVEAA RSG Sbjct: 195 VPYPRANIRLYDRMAAK-GLLVSEFAPGIPALRENFPIRNRIISGLSLGVIVVEAASRSG 253 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL--------- 283 +L+T+R ALEQGREV+A+PG + S G L++QGA V PE++LE+L Sbjct: 254 TLITSRLALEQGREVYAVPGAALSGQSLGCQELVRQGAKPVFAPEDVLEDLAGPLRDFGV 313 Query: 284 ---------------------------------------QFGLHWLPDAPENSFYSPDQQ 304 + + + Sbjct: 314 QAEHLTREAAERRRRAEAEGTGLSRTLFACMPPETDAPARKVDPGDGEGAPAQGTDGETD 373 Query: 305 DVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 A ++ + + VD + G+ E+ LL LE+ G I +PG Sbjct: 374 TAAPAQDNIVPLLREQGPLHVDALGAALGRSPAELAPVLLGLEIMGRIRRLPGARY 429 >UniRef50_Q0F0X6 DNA processing protein DprA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0X6_9PROT Length = 369 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 112/361 (31%), Positives = 162/361 (44%), Gaps = 11/361 (3%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 WLRL + + R+ + + + + G+ + S E Sbjct: 9 WLRLSMVHGIGPMLGRRLLAAIGGIEALWSATGDELRAVDGMGQQLVASLSSTHLSQAEQ 68 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWY 121 + ++ D +P L D P LF G+ L H LA+VG+R S Sbjct: 69 IVKQCAAQQIGILCPDDARWPVALANVEDAPLILFYRGDPVCLSHLPMLAMVGARRASRE 128 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R + + I SG+A GID AH AL+ G++IAVLG GL R Sbjct: 129 GRVLTRRWSRYFTAHDIAIVSGMAFGIDAAAHAGALEEQGITIAVLGCGL-LALTEEQQR 187 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 ++ E+ G ++SEF +FPRRNR+I+GL++ +V+EA +RSGSL+TAR A Sbjct: 188 QVEAIAER-GCVISEFLPAQSARPEHFPRRNRVIAGLAQATVVMEADIRSGSLITARLAG 246 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GR+VFA+PG + G H LI+ GAIL+ EE+L L Y P Sbjct: 247 EYGRDVFAVPGSVLADNHAGCHRLIRDGAILLERAEELLVQLGLHADKTTQLHAGKQYHP 306 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + E +D++AE G +PE+ LL LEL G I +PG L Sbjct: 307 A----DAEEAGILMAMRGEAVHLDLLAETCGLTLPELSPILLRLELQGVIERLPGSRYLL 362 Query: 362 R 362 Sbjct: 363 A 363 >UniRef50_A5WI26 DNA protecting protein DprA n=3 Tax=Psychrobacter RepID=A5WI26_PSYWF Length = 421 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 118/412 (28%), Positives = 178/412 (43%), Gaps = 52/412 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---VLQQTGLTLRQAQRFLSFPRK 58 + L L + ++ Q G+ + R ++ Sbjct: 10 TEKAAILLLWQRVNTSLSAFYKLIAHFETAQQALQAGRSQWQNLGIHKKHLDRHAQASQE 69 Query: 59 SIESSLCWLEQP----NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + LEQ L+ YP QLL D P LF G L+ Q+A+VG Sbjct: 70 EDAQFIAQLEQRMAAGEFQLLFQQQADYPQQLLGLFDPPPLLFYRGNKQRLNQAQIAIVG 129 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL----QVNGVSIAVLGNG 170 SR + +R+ + LA G I SGLA+G+D AH AL + G S+ V+G G Sbjct: 130 SRRPTPKAQRFSFDIAQYLAKSGFIICSGLAQGVDAQAHLGALSQSAEYAGRSVGVMGTG 189 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P++H L ++ +GG +VSE PP + FPRRNRI++GLS G +V EAAL+ Sbjct: 190 IDVCYPKQHQALFDRMIAEGGCIVSELFPGTPPHKHTFPRRNRIVAGLSLGTVVTEAALQ 249 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL---------- 280 SGSL+TAR EQG++VFALP I N ++G H LI++GA LV P++I+ Sbjct: 250 SGSLITARLTSEQGKQVFALPSDIDNVNAQGGHHLIREGATLVYHPDQIVSDLCHQLVTP 309 Query: 281 ---------------ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN--------- 316 ++L P N+ S +L Sbjct: 310 VQISQAKDTIYGNSSDHLHANATSHPTKHPNAVSSDTTATPKDNVNPILKAQKSVTISEH 369 Query: 317 -------VGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + E +D + + +++QL+ELEL G +A V G Y R+ Sbjct: 370 LQPLWVHIQFEPQDLDALINKTQLDTATLLSQLMELELMGAVAEVGGRYQRV 421 >UniRef50_C3QS04 Smf protein DNA processing chain A n=33 Tax=Bacteroidales RepID=C3QS04_9BACE Length = 374 Score = 316 bits (810), Expect = 8e-85, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 11/369 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + + L + + + + I + + +QR + Sbjct: 6 EEQIYSIALTMVPGIGHIGAKHLIDGMNNAVDIFRLRKEIPERIPEVSQRVVDALDCPQA 65 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E ++ + + E YP +L D P LF +G L +VG+R Sbjct: 66 VIRAEQEYEFIRKNRIACLSFHDEAYPSRLRECEDAPVVLFFKGNADLNSLHILNMVGTR 125 Query: 117 AHSWYGERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + YG + F L V + SGLA GID AH+ AL ++ VL +GL+ I Sbjct: 126 NATDYGTQICASFLRDLKAVCPDVLVVSGLAYGIDIHAHREALANELPTVGVLAHGLDRI 185 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H + A +LE+GG L +EF P +NF RNRI++G+ +V+E+A + GSL Sbjct: 186 YPYVHRKTAVDMLEKGGLL-TEFLSGTNPDRHNFISRNRIVAGMCDATIVIESAEKGGSL 244 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A R+ FA PG + + S+G + LI+ A L+ E+ ++ + + + + Sbjct: 245 ITAELAEGYHRDCFAFPGRMSDEYSKGCNRLIRDNKASLLLSAEDFVQAMGWNMQTT-LS 303 Query: 294 PENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + S +++ +++A + ++ + A PV ++ L ELE+ G I Sbjct: 304 EKVSVQRSLFIELSEEEQKIVAILEKLGNLQINSLVVEADIPVNKMTALLFELEMKGVIR 363 Query: 353 AVPGGYVRL 361 + GG +L Sbjct: 364 VLAGGMYQL 372 >UniRef50_B3EFC5 DNA protecting protein DprA n=4 Tax=Chlorobiaceae RepID=B3EFC5_CHLL2 Length = 392 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 181/380 (47%), Gaps = 15/380 (3%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRF-------- 52 L L S+ L + I Q + L+ G+ A+ Sbjct: 12 LFLLTLASVPGLGPARINAIITRFGYQPDLLRASADVFLEVPGIGRSLAEEISGFLSGSK 71 Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 ++ L++ L+ +P L D P LFV G +A+ Sbjct: 72 RREAEEASLRQYEELDRHQASLVTIFDPCFPALLKEIYDPPPFLFVRGSFSEPEPPSIAI 131 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG++ L LA+RG+ I SGLA GID AH+AA++ G +IAVL ++ Sbjct: 132 VGTRRASAYGKQAAGLLSGELASRGLLIVSGLAYGIDTAAHEAAMRAGGKTIAVLAGSVD 191 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++ ++ ++EQ GAL+SE L FP+RNRIISG+S G +VVE+ L+ G Sbjct: 192 HVYTDPRGKIWPKIIEQ-GALISEELFGSELLPGKFPKRNRIISGMSLGTVVVESDLKGG 250 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA ALEQ REVFA+PG I + S G + LI+ G A +V +++LE L Sbjct: 251 ALITASYALEQNREVFAVPGTIYSHNSRGTNRLIQSGQAKMVLATDDVLEELN-RPSLNI 309 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 E++ ++ ELLA + +D +A +AG + E++ L ELEL + Sbjct: 310 PVHEHAATDTVTIVLSKAERELLAYMDTGPIHIDALALQAGHDISELLVLLFELELKKAV 369 Query: 352 AAVPGGYVRLRRACHVRRTN 371 +PG + ++ H + ++ Sbjct: 370 VQLPGQFFGKKQIKHEKNSH 389 >UniRef50_B2T1K4 DNA protecting protein DprA n=9 Tax=Burkholderiaceae RepID=B2T1K4_BURPP Length = 422 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 130/401 (32%), Positives = 187/401 (46%), Gaps = 52/401 (12%) Query: 14 SSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR------KSIESSLCWL 67 L + + I + A + +++ + W Sbjct: 21 PGLKPGALRLLLGAFGLPEAIFEQAPEALAEIAGAAAASAALAPTGPDFDAQLDAVIAWR 80 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 EQP + ++ D YPP LL D P L+++G L+ LH+ +A+VGSR+ + G Sbjct: 81 EQPGNQVVTLDDPAYPPALLTMPDPPPLLYIKGRLNLLHTRAVALVGSRSATPQGVEDAE 140 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 F L+ GVT+ SGLA GIDG AH+ LQ G ++AV+G G + ++P H LA + Sbjct: 141 RFARELSVAGVTVVSGLALGIDGAAHRGGLQGIGGTVAVIGTGADLVYPAAHHALARQIA 200 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 Q GA++SE+PL P A +FP+RNR+I+GL GV++VEAA+RSGSL+TAR A E GR++ Sbjct: 201 VQ-GAILSEWPLGTPARAAHFPQRNRLIAGLVSGVVIVEAAMRSGSLITARLANEMGRDI 259 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD--------------- 292 FALPG I P S G H +IKQGA LV P+E+LE L F P Sbjct: 260 FALPGSIHAPLSRGCHRIIKQGAKLVETPDEVLEELGFARQAAPRAASGSAHATFSNRAF 319 Query: 293 ------------------------------APENSFYSPDQQDVALPFPELLANVGDEVT 322 A + LLA +G T Sbjct: 320 SRNTPTGSGAAADRAQLAALQPTEASPAVSAEAPLAAATPCPPANPEAQRLLAALGHSPT 379 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 ++++A R ++ T LL+LELAG + +PGG Sbjct: 380 TLEILATRTEMEDADLQTALLQLELAGHVTMLPGGRFMRAS 420 >UniRef50_C0BBH9 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBH9_9FIRM Length = 365 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 112/366 (30%), Positives = 173/366 (47%), Gaps = 6/366 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTGLTLRQAQRFL-SFP 56 M + L + + GD + + +++ +T ++ S Sbjct: 1 MSEMWYTYWLACVEGITGDRKCELCRKNGSAEAVYYIEEKGIREQIITEKEWGILKESKK 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + + + YP + P ALF GE+ +AVVG+R Sbjct: 61 KRNWREAYQKVVDRGIQMAVRGQNNYPKRFEELAGMPYALFFIGEMPREGMPSVAVVGAR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YGE+ F E LA G+ I SG+A GIDG+AH+AAL V G + AVLG G + +P Sbjct: 121 RCSSYGEKMTLRFVERLAESGIQIISGMALGIDGMAHRAALNVGGKTFAVLGGGADVCYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H L L+++GG ++SE P PP+A++FP RNR+ISGL+ VLV+EA +SGSL+T Sbjct: 181 AAHKGLYKDLIKRGG-ILSEQPPGTPPVAWHFPARNRLISGLADVVLVMEAKEKSGSLIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A ALEQGR+++ALPG + P S G + LI+QGA + EE L L Sbjct: 240 ADMALEQGRDIYALPGMVTEPLSCGCNRLIRQGA-GILLNEEDLLEELVIKGLLKKKIAI 298 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + ++ + + + +G +D + G EV+ + L+L G I Sbjct: 299 ISDTKNKIKLETKENLVYSKLGLYPRGLDDLQRETGLTPQEVMGICVSLQLKGCIQERSK 358 Query: 357 GYVRLR 362 Y Sbjct: 359 NYYVRA 364 >UniRef50_Q1YV04 DNA processing chain A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV04_9GAMM Length = 360 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 138/360 (38%), Positives = 188/360 (52%), Gaps = 16/360 (4%) Query: 2 VDTEIWLRL--MSISSLYGDDMVRIAHWVAKQSHIDAVVLQ------QTGLTLRQAQRFL 53 +D E L ++ ++ I L+ L + Q Sbjct: 1 MDRECHYALVSQHLNKFTPKFQRQLLESAQTYCAIFEQSLEGLPKSLHPFLENLRNQYEQ 60 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + R+++E+ + E +IP S YP QL P L++ G + LH QLA+V Sbjct: 61 ASWREAVETIVLRTEDCGARMIPITSPDYPDQLRQIGGAPRLLYLRGSIDNLHLPQLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + G R + E LA G ITSGLA G+DG AH AL G +IAV+ G+ Sbjct: 121 GSRRMTRGGADNARAWSEHLAAGGFVITSGLAHGVDGAAHLGALDAGGKTIAVMATGIEA 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++PR H +LA +++QGG L++EF PLA NFP RNRIISGLS GVLVVEAALRSGS Sbjct: 181 VYPRAHLKLAEQIIDQGGTLITEFEPTTKPLATNFPSRNRIISGLSLGVLVVEAALRSGS 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TAR ALEQ REVFA+PG I NP S G H LIKQGA LV + +EI+E L+ L L Sbjct: 241 LITARYALEQDREVFAIPGSIHNPQSRGCHHLIKQGAQLVEKAQEIVEQLKGSLSGLAQD 300 Query: 294 PENSFYSPDQQ--------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 ++ P ++ +LL+++G E T +D + V E+ L+ L Sbjct: 301 VLSATEPPQAPFSVTHGALNLEADEVQLLSHLGYEPTDMDSLISDGFFSVSELSRLLVAL 360 >UniRef50_A6VR82 DNA protecting protein DprA n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VR82_MARMS Length = 442 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 123/428 (28%), Positives = 187/428 (43%), Gaps = 74/428 (17%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQ--------------------------SHIDAVVLQ 40 WL L +S + + R+ ++++ I +L Sbjct: 14 WLCLSFLSGIGPSRLSRLYTYLSQFDYHASMDNAENLPLFSNEELSDTSPSETITYDLLI 73 Query: 41 QTGLTLRQAQR---------FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 A++ + SL WLE+ +HHL+ + E YP L + Sbjct: 74 ALKWPEITARQAMDYFSNGILTKEQEAKRDESLAWLEEADHHLVLQEDEHYPTALKEISV 133 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P L+VEG L ++ +VG+R + YG F E L+ RGV + SG A G+D Sbjct: 134 APAFLYVEGNRDTLALPKVGIVGARKCTRYGRDATFQFAEQLSARGVCVVSGGAMGVDTA 193 Query: 152 AHKAALQVNG-VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 AH+ AL +IAV+G GL +P + ++ +LEQGGAL+SE+PL P + FP Sbjct: 194 AHQGALYNKTTPTIAVMGTGLFHRYPHHNRQMFEEILEQGGALISEYPLSTSPRPHLFPP 253 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGA 270 RNRIISGLS GVLV EA+L+SGSL++A A++Q REVFALPG + +P SEG H L++QGA Sbjct: 254 RNRIISGLSMGVLVSEASLKSGSLISASYAIQQNREVFALPGRLIDPQSEGCHQLLRQGA 313 Query: 271 ILVTEPEEILENLQFGLHWLPDAPE----------------------------------- 295 LV ++IL + Sbjct: 314 TLVRHVDDILAECSDLSLPSAPITKSVNITKRVKSSAAEKNTKNPLSNNRNQTAESMPVL 373 Query: 296 -NSFYSPDQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 ++ + + ++A + E D + ++ ++ L+ELEL G + Sbjct: 374 VSNQVHALPESTSDNAKAVIAIMEQEAQPMDFDALIRQSKMDAGLMMQVLMELELYGCVE 433 Query: 353 AVPGGYVR 360 G Y R Sbjct: 434 NREGLYCR 441 >UniRef50_B9P8E5 Predicted protein n=4 Tax=cellular organisms RepID=B9P8E5_POPTR Length = 371 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 176/365 (48%), Gaps = 11/365 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA---VVLQQ---TGLTLRQAQRFLSFP 56 + WLRL + + R+ + A L++ + + Sbjct: 10 EVAAWLRLTATPGVSALAGRRLLAKFGLPQTVLAQNLASLREVVDAKVACVLNAPLDAAM 69 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 I+ ++ WL H ++ YP LL D P L++ G+ L L +VG+R Sbjct: 70 SALIDRTVAWLADARHAMVTMADAGYPAGLLDLADPPLLLYINGDPARLAGPALGMVGAR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + G R + F + G T+ SGLA GID AH AL+ G ++AV+G G + ++P Sbjct: 130 KATTQGARDAQAFASAFSNAGWTVVSGLALGIDAAAHAGALEGPGGTVAVIGTGADIVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 RH LA +++ GGA+VSEF L P L +FPRRNRII+ LS+GVLVVEAA RSGSL+T Sbjct: 190 GRHHALAHRIVDAGGAIVSEFALGTPGLPNHFPRRNRIIAALSRGVLVVEAAERSGSLIT 249 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GREVFA+PG I + G H LI+QGA LV P ++ E P + Sbjct: 250 ARLASEIGREVFAMPGSIHAELARGCHKLIRQGAKLVETPADVFEEFG-----DPGGVAS 304 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 P +P A + + D + ER+G LLELEL G + + G Sbjct: 305 VAPVPVPDSAPVPGDPFGAALAYDPVTFDALCERSGLAPHMAAAMLLELELGGTVERMAG 364 Query: 357 GYVRL 361 R Sbjct: 365 NRYRR 369 >UniRef50_C4GBJ9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBJ9_9FIRM Length = 385 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 13/352 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-----FLSFPRK 58 W+ +S + L ++ S + ++ QR Sbjct: 19 YRYWMTCLSGAGLGNRSKRQLLDCYKSPSAVYRASKEELDKLGFLRQREVDALIFQRGSW 78 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS----FQLAVVG 114 + + + L+ D E YP L D P LF G + + S AVVG Sbjct: 79 DLREEYERFLEADMGLVTLDMEGYPANLRMLHDAPFGLFFRGRISSGVSSGSSRLAAVVG 138 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S YG+R L I SG+ARGIDG+A + L G +IAVLG G + + Sbjct: 139 SRTPSAYGKRVAEDLSAILTDYHYQIVSGMARGIDGIAQTSCLDTGGQTIAVLGCGADIV 198 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + L ++E G L S++P PL+ +FP RNRIISGL+ VLV+EA RSGSL Sbjct: 199 YPKENWILYDRIVET-GCLFSKYPPQTAPLSRHFPARNRIISGLASVVLVIEARRRSGSL 257 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA ALEQG++V+ LPG I +P S G + L+ QG A +T+ ++++++L+ Sbjct: 258 ITADFALEQGKDVYTLPGRITDPMSAGCNELLHQGAAQPITDYDQLIDDLELIAGM--GH 315 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + +L + +D + +R+ + V L EL Sbjct: 316 FQPREDLRRLPPLTREQEKLYQCLDFYPMDLDQLVKRSELDYLQAVRVLTEL 367 >UniRef50_C2HGN6 SMF family DNA processing protein n=2 Tax=Finegoldia magna RepID=C2HGN6_PEPMA Length = 356 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 162/338 (47%), Gaps = 9/338 (2%) Query: 24 IAHWVAKQSHI-DAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEF 81 I I + + + + L +K I L + + Sbjct: 22 IIENYDTLDDIIYDNAKKLLEVDSKIYEFILKNMKKFDINLYKEKLWKNSIKFTTYGDSK 81 Query: 82 YPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTIT 141 YP +LL D P L+ +G L+ ++ VG+R S YG + F ++ + + Sbjct: 82 YPKKLLEIDDAPYTLYYKGNLNEDFDNCVSFVGARKCSQYGSYACKKFVSEISQYKIPVV 141 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS-LLEQGGALVSEFPLD 200 SGLA GID ++H+ +L+ N +I VLG G++ ++PR + R+ + G ++SE+P Sbjct: 142 SGLALGIDKISHQTSLENNNKTIGVLGCGIDQVYPRSNYRVFQDMISSHNGVIMSEYPFG 201 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 + PL YNFP RNRIISGLS +V+EA +SG+L+T+ AL QGRE+FA+PG I + S Sbjct: 202 IAPLPYNFPFRNRIISGLSLATVVIEAKEKSGTLITSSYALSQGREIFAVPGNINSVYST 261 Query: 261 GPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 G + LIK GA ++T+ +I+ + + D+ ++ + Sbjct: 262 GTNQLIKDGAYILTDVLDIITQI------PEFQNKYIEKPQLSFDLNELERKIFNLLKIC 315 Query: 321 VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D ++ + + + +V+ L ++EL G + + Y Sbjct: 316 ANSPDEISIKLNEDISDVLMSLTKMELLGIVVDIGSKY 353 >UniRef50_C2FZE8 SMF family DNA processing protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZE8_9SPHI Length = 370 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 10/367 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 ++T + + L + + + I +Q G+ + +R S Sbjct: 1 MNTLLQIALTKVKGIGPRLSRSLLSHCDAVEAIFTASKKQLLTIPGINMAIIERLRSKEL 60 Query: 58 KSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 ++ + L+ + YP +L D P L+ +G + +++VG+R Sbjct: 61 LLEAEKELSFISAHDIDLLWIEDNRYPRRLRECDDAPLVLYYKGSESLNPAKTISIVGTR 120 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG+R + L G+ I SGLA GID AH+AAL+ ++ ++G+GL+ I+P Sbjct: 121 KATAYGQRICDELIQELRLPGIQIISGLAYGIDISAHQAALRNQIPTLGIMGHGLDRIYP 180 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H +AA +L GG L +EF P NFP RNRII+G++ +V+EAA R G+L+T Sbjct: 181 AAHRAIAAEMLSCGGLL-TEFTSGTNPDRQNFPMRNRIIAGMADVTIVIEAASRGGALIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPE 295 A A R+V A PG I S G ++LIK A L+ ++ + + Sbjct: 240 AEIANTYNRDVCAFPGGIDQESSAGCNYLIKTNRAHLIRHASDLFYLMNW--EQEQQQKP 297 Query: 296 NSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 ++ S ++ ++ + + P+D +A P ++ LLELE+ G I ++ Sbjct: 298 SAQLSLLPPQLSEEQEKIYQFLQQQNPAPIDEIAIHCALPQSQLAISLLELEMEGIILSM 357 Query: 355 PGGYVRL 361 PG +L Sbjct: 358 PGKVYKL 364 >UniRef50_Q6AQ50 Probable SMF protein (DNA processing chain A) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ50_DESPS Length = 357 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 124/358 (34%), Positives = 180/358 (50%), Gaps = 12/358 (3%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSF--PRKSIESS 63 L S S L R+ + S + L Q GL Q F R S Sbjct: 5 LCSASGLGVRGFWRLIEFYHHPSRVLDASLAQIRSVAGLREGQLAGFADPQSLRLSAAEE 64 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 L L+ I S YP L D P L+ G+L L++ LA+VG+RA + YG Sbjct: 65 LGRLDALGLLAISFSSPLYPENLKQIFDPPPVLYASGDLSLLNTHALAIVGARASTSYGR 124 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R ++ G+T+ SGLA G+D AH+ AL V+G +IAVLG GL+ ++P ++ +L Sbjct: 125 RVAHNLSSAVSLAGLTVVSGLALGVDTAAHEGALAVSGKTIAVLGCGLDIVYPYQNKKLY 184 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 ++ G +++E+PL P + FP RNRII+G+S GVLVVEAA +SGSL+TA+ AL+ Sbjct: 185 -KIIAGEGLVITEYPLGTRPDGFRFPARNRIIAGMSDGVLVVEAARKSGSLITAQLALDF 243 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 REVFA+PG I + S G H L++QGA LV + +ILE F L + P Sbjct: 244 NREVFAVPGQIDSVKSAGTHILLQQGAKLVHDVTDILEEFPFPLRVGQGGQKGEASLP-- 301 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + ++L + + + + + +V +LL LEL I +PG VR Sbjct: 302 ---SEAGQQILDLLDVYPSSQEELMVESKLSAKKVAEELLLLELEDLIEILPGNMVRR 356 >UniRef50_Q1MS59 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS59_LAWIP Length = 421 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 109/372 (29%), Positives = 169/372 (45%), Gaps = 36/372 (9%) Query: 4 TEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKS 59 E W L L L G ++ +Q G+ ++ LS ++ Sbjct: 29 KEFWASLALKYTKGLGGRTYKKLLTSFGSAFEALQQVKKWKQLGIPSDKSLGILSDSWRA 88 Query: 60 -IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + + ++ YP L +D P L+ G++ L + +A+VG+R Sbjct: 89 GAKKEWEAVRGCYGTILLWTDPRYPNLLKEISDPPLFLYCLGDISLLENPCIAIVGTRKC 148 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S G R R F + LAT G+T+ SG+A GID AH +++ G +I VLG+G+N +PR+ Sbjct: 149 SIEGIRVTRAFAKGLATAGITVVSGMALGIDREAHLSSIDFPGKTIGVLGSGINISYPRQ 208 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 ++ + LL G L+SE+ P FP RNRIISGLS GVL+VEAAL SGSL+TAR Sbjct: 209 NSDVRE-LLVNKGLLISEYAPGTRPEPGFFPTRNRIISGLSLGVLIVEAALHSGSLITAR 267 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQ R V+A+PG IG+P +EG LI++GA + ++IL +L L + Sbjct: 268 LALEQNRSVYAIPGAIGSPFAEGCQDLIREGARPIFSVDDILHDLSESLKGFINQYNKQD 327 Query: 299 YSPDQQDVALP------------------------------FPELLANVGDEVTPVDVVA 328 ++ L +++ + E +D + Sbjct: 328 IIYKEKKEGLEEQDIMLSLPASNDKTTVINKQSQYKTFGKIERQIIDIIRLEPKDIDQLC 387 Query: 329 ERAGQPVPEVVT 340 + P E+ Sbjct: 388 QLLQLPAEEISP 399 >UniRef50_B6FZ86 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZ86_9CLOT Length = 379 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 98/372 (26%), Positives = 172/372 (46%), Gaps = 10/372 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFP 56 M + +L L + + +I + I + + + +++ Sbjct: 7 MDKRDAYLWLYGVVGCNNLTIDKIEREMPGTKDIFDFSEKTIYNLERVNDKVKSSIINYK 66 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +++ L + N + YP +L D P LF +G L AL + +VG Sbjct: 67 NNMNVDDYKELLYKKNVKYSVIGDDDYPYKLANIYDAPKVLFYKGNLSALGKHFSIGIVG 126 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + YG + L+ G I SGLA G+D ++H+A+L G + VLG+G++ Sbjct: 127 SRKPTVYGAECTKKLARELSDYGADIISGLAIGVDAISHEASLLGKGKTFGVLGSGIDNP 186 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + L +++ GGA++SE ++ + F RNRIISGLS GV++VEAA +SG+L Sbjct: 187 LPKTNIWLMNKIVDSGGAVISEHGINKKVHPHYFANRNRIISGLSDGVIIVEAAKKSGAL 246 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW---LP 291 +TA A EQGR VFA+PG I + S+G H LIK+GA L +++LE + Sbjct: 247 ITAEFAAEQGRSVFAVPGSIFSENSKGCHRLIKEGAKLTENIDDVLEEFEVFKFKTLEKE 306 Query: 292 DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + + D+ L+ + + +D + + + ++ + +L+L Sbjct: 307 IKYDTIEKADINADLEDDENILVDIIRKNGSIDMDSLCLKTKFGIEKINPIVEKLKLYDL 366 Query: 351 IAAVPGGYVRLR 362 I + G ++ Sbjct: 367 IFEIEKGVYSMK 378 >UniRef50_C3JBR0 Smf protein DNA processing chain A n=2 Tax=Bacteria RepID=C3JBR0_9PORP Length = 368 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 167/369 (45%), Gaps = 12/369 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF-----LSF 55 M L L I + + RI V I + G+ +R LS Sbjct: 1 MGKAAYLLALSRIEGVGAITLRRILDAVDDVCDIFSNPAILEGVAPALYRRVVSHLSLSE 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 +S + + ++ + YP L D P A F G ALHS ++VVG Sbjct: 61 LLESAKREVEEAKRKHIDTFGLGDVDYPQLLAECADPPPAFFYFGNRDALHSPHCISVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +R S YG + + E LA + + + SGLA GID AHK AL + +I VL +GL+ Sbjct: 121 TRRASRYGLKAVEVLLEDLANKLPDLVVISGLAFGIDVKAHKVALDLGIPTIGVLAHGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P H +A ++++GG L SE+ ++F RNRI++GLS LVVE+A R G Sbjct: 181 RIYPAAHRNIAIEMVKKGGLL-SEYSWGSKVERHHFVGRNRIVAGLSHATLVVESADRGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVTEPEEILENLQFGLHWLP 291 SL+TA A GREVFA+PG I + S G + +I AI + I+ L +G Sbjct: 240 SLLTAAMASGYGREVFAVPGRITDSTSVGCNRIIASMQAIPAVNADSIISVLGWGKSNGG 299 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + +S Q P L V +E + + R G E+ +L LE G+I Sbjct: 300 EEESSSSLFVPQDLPDDPVLRL--IVEEETIHFNDLLMRLGMSAAELSNKLFTLEFDGFI 357 Query: 352 AAVPGGYVR 360 +PGG Sbjct: 358 KPLPGGLYA 366 >UniRef50_C0EHG5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHG5_9CLOT Length = 369 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 168/366 (45%), Gaps = 7/366 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + WL L + + + Q L+ RKS + Sbjct: 4 DELLDWLWLAQAFPYGSIKPAELLTEYQHARAVYEHRSECAERFDFLTQSELAAMRKSPQ 63 Query: 62 S---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 L + + +IP D YP +L P L+ G L A +AVVG+R Sbjct: 64 EYLPILERCARFDIQVIPYDHPAYPARLQTIDCPPVVLYCRGSLAAFSESLCIAVVGTRT 123 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S Y +R LA RG+ + SG + GID H+AAL V G + AVL L+ +P Sbjct: 124 PSEYSKRVAAYAGRELAQRGICVLSGCSEGIDAEVHRAALSV-GRTAAVLSCPLDKNYPA 182 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L +L GGALVSEFP F RNR++S LS GV+VVEA+ +SGSL TA Sbjct: 183 SNEGLRREILRHGGALVSEFPPGTEFFPEQFALRNRLLSALSDGVVVVEASAKSGSLSTA 242 Query: 238 RCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 R A +QGREVF + P + NP +G L+++GA ++ E ++ PE Sbjct: 243 RAAADQGREVFCVPPADLFNPRYDGVKPLLREGAAQFLSVGDVTEAFRYQFSVAATLPEE 302 Query: 297 -SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + +SPD +++ EL + D+ ++ + G V +++ L +LEL+G + Sbjct: 303 GTAHSPDLSELSSQEVELYRAMPDDPVDTGYLSAKTGLLVSDLMQMLTKLELSGAVRKTA 362 Query: 356 GGYVRL 361 G Y ++ Sbjct: 363 GRYQKV 368 >UniRef50_B7S2K2 DNA protecting protein DprA n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2K2_9GAMM Length = 301 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 124/296 (41%), Positives = 161/296 (54%), Gaps = 2/296 (0%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L ++ YPP L D P L V G L QLA+VG+R S G + Sbjct: 8 LRAAGTEVLSLADPLYPPLLKTIPDPPPVLHVRGNPMLLARPQLAIVGARRASAAGLQAA 67 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 G+ +TSGLA G+DG AH+ AL G ++AV+ G+ TI+P RH L + Sbjct: 68 HKLAVAAVRAGLGVTSGLALGVDGAAHRGALSAGGDTVAVMATGIETIYPHRHEPLGQEI 127 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 G LV+EFP PL Y+FP+RNRIISGLS GVLVVE+AL SGSL+TA A+EQGRE Sbjct: 128 -ASSGCLVTEFPPGTKPLPYHFPKRNRIISGLSLGVLVVESALPSGSLITATSAMEQGRE 186 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 VFALP I + G G LI+ GA +V E+ILE L L P + + Sbjct: 187 VFALPWSISHKGGAGCLSLIRDGAKMVLGIEDILEELDSLFG-LQQELSQVSTIPSPESI 245 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + LL +G EV +D + +G PV +V+ +L LELAG + PGGY+R R Sbjct: 246 SEQDCLLLELLGFEVISLDQLVVASGLPVGQVMGELSSLELAGRVNRCPGGYIRSR 301 >UniRef50_B1ZLL3 DNA protecting protein DprA n=3 Tax=Methylobacterium RepID=B1ZLL3_METPB Length = 397 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 131/392 (33%), Positives = 175/392 (44%), Gaps = 38/392 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL+ + + + S + LT R +R + R E Sbjct: 7 QRLDWLRLIRTGGIGPRSFRGLINRFGSASAALDALPD---LTKRAGKRAVPPTRAEAER 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + I YP L AT P + V G+ L +A+VGSR S G Sbjct: 64 EMAAAARLGARFIAMGEAAYPKALHATETAPPLIAVRGDAAVLLKASVAMVGSRNASTAG 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + G+ + SGLARGID AHKAA+ ++AVL G + I+P HA L Sbjct: 124 LAFTERLARGFGEAGLVVVSGLARGIDARAHKAAVTTG--TVAVLAGGQDKIYPETHAGL 181 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++++ GGA+V+E P+ P FPRRNRIISGLS G +VVEAA RSGSL+TAR ALE Sbjct: 182 VDAIVDAGGAVVAEMPMGWVPRGREFPRRNRIISGLSLGTVVVEAARRSGSLITARFALE 241 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QGREVFA+PG +P +EG + LI+QGA LV+E E +L L+ + + P+ Sbjct: 242 QGREVFAVPGSPLDPRAEGTNDLIRQGATLVSEVEHVLSVLEPLIAGGAPSAGGLDDRPE 301 Query: 303 QQDVA---------------------------------LPFPELLANVGDEVTPVDVVAE 329 L+A + D +A Sbjct: 302 PSGTTDYWDEIDFDGTAPVALSLFPGADEPVETGSEPEDDRTRLIARLSPTPVATDELAR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G PV V T LLELEL G I G V L Sbjct: 362 STGLPVRVVQTTLLELELDGRIERHGSGTVSL 393 >UniRef50_Q1QTJ7 DNA processing protein DprA, putative n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTJ7_CHRSD Length = 371 Score = 313 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 187/372 (50%), Gaps = 14/372 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTGLTLRQAQRF----- 52 M E W L + L + + L R+ R+ Sbjct: 2 MTARE-WCALAHLPKLGARRLAVLRRELAAQGLDDAWPQAWLAAMPAGPRETLRYWLEHP 60 Query: 53 -LSFPRKSIESSLCW-LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL 110 S S+ +L W P+HHL+ +P L D P L+ +G+L AL L Sbjct: 61 AKSPLETSVSQALAWEASAPSHHLLYPGHPAWPALLDEIADPPALLWAKGDLAALEPPGL 120 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+R + G F L G +I SGLA GIDGVA + AL G S+AVLG G Sbjct: 121 AMVGTRRPTREGSDNAAWFARGLVEAGFSIVSGLALGIDGVAQRTALDAGGRSVAVLGCG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + I+P RHA L LL++GG L+SE P + A +FPRRNRII+GLS GVLVVEAA + Sbjct: 181 VEVIYPPRHAGLYRRLLDEGGLLLSEHPAETRAHARHFPRRNRIITGLSLGVLVVEAAEK 240 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL 290 SGSLV+AR ALEQ REVFA+PG + N + G LI+ GA LV ++ILE L W Sbjct: 241 SGSLVSARLALEQNREVFAVPGSLHNVQARGNLGLIRDGAWLVRGRDDILEQLG---QWQ 297 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + + P LLA + TP+DV+ ER+ V +LLELELAG Sbjct: 298 APQAVVASTDDMTEAANAPADPLLALLDTAPTPLDVLVERSELDVGGCQMRLLELELAGQ 357 Query: 351 IAAVPGGYVRLR 362 A V GG+VR Sbjct: 358 AAQVSGGWVRRA 369 >UniRef50_C4V2Y4 SMF family DNA processing protein n=2 Tax=Selenomonas RepID=C4V2Y4_9FIRM Length = 369 Score = 313 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 156/339 (46%), Gaps = 19/339 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ-------AQRFL 53 M D L+ + M ++ + I ++ + + Sbjct: 7 MGDRWYLAALLRCPQVGSVRMRKLLAVYSSAKEIWSMSAHALRAAGVLTDVVADVLAQHI 66 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 E + + ++ + + YP L D P L+ G L +++V Sbjct: 67 QSDPHLPERLEESCRRLDVAVVTMEDKRYPIVLREIFDPPLVLYCRGTLLPDVRR-ISIV 125 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S YGE F E LA GVT+ SG ARGID AH+ AL+ G ++AVLG G++ Sbjct: 126 GARKFSGYGEAAALEFAEHLAAAGVTVVSGAARGIDTRAHRGALRS-GRTVAVLGCGVDV 184 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + RL A + GGA++SE+ PL FP RNRIISGL++GVLVVEAA RSGS Sbjct: 185 AYPSENRRLLAEICTSGGAVLSEYAPGTQPLPMFFPARNRIISGLAEGVLVVEAARRSGS 244 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA AL +GREV+A+PG I +P S G H LI+ GA LV P EILE + Sbjct: 245 LITAEMALSEGREVYAIPGSIYSPQSGGCHNLIRAGARLVESPREILEEMHLVESPRRSV 304 Query: 294 PENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA 331 + + + + +D + + Sbjct: 305 RTQ---------LTPEEAHIYQVLSFDHALTMDEIIDSL 334 >UniRef50_B8G3R3 DNA protecting protein DprA n=3 Tax=Chloroflexaceae RepID=B8G3R3_CHLAD Length = 362 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 102/327 (31%), Positives = 154/327 (47%), Gaps = 11/327 (3%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ---QTGLTLRQAQRFLSFPR-KSI 60 ++ + + R+ + GL R + + + Sbjct: 7 RYYIGFNLTPGIGPLRLSRLIERCGSVAAAWHADDATMVAAGLDARSIANLRTARQTLDL 66 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + + L + YPP L P L+V G + A +A+VG+R + Sbjct: 67 DVEVARLRAHGITPLAITDPAYPPLLRMIAAPPPLLYVRGTMTASDQRAIAIVGTRHPTP 126 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG R LA G+TI SGLA G+D +AH AAL+ G ++AVL G + ++P R+ Sbjct: 127 YGREVTRRLARDLAVVGITIVSGLALGVDTIAHTAALEAGGRTLAVLACGADRVYPERNR 186 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 LA ++ GAL+S++PL PP NFP RNRII+GLS LVVEA SG+L+T + A Sbjct: 187 ILAEQIV-TAGALISDYPLGTPPAPLNFPPRNRIIAGLSLATLVVEAREDSGALITVQFA 245 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 L+QGR+V A+PG I NP S GPH LI++GA ++T +++L L Sbjct: 246 LDQGRDVMAVPGSIFNPLSAGPHRLIREGAAIITSAQDVLGVLNLEGRSDLHE------P 299 Query: 301 PDQQDVALPFPELLANVGDEVTPVDVV 327 P + + + V E +DV+ Sbjct: 300 PLELALTAEEEAIYRVVESEPQHIDVI 326 >UniRef50_A5FL93 DNA protecting protein DprA n=18 Tax=Bacteroidetes RepID=A5FL93_FLAJ1 Length = 366 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 14/370 (3%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 M D E L L+ + + ++ +K + Q G+ + Sbjct: 1 MSDQELFYLLALLKVDGVGDIMAKKLLVNCSKAEDVFKTKTNQLAAIDGVGSVLLKNLKD 60 Query: 55 FP-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + L ++ + N + E YP +L D P LF G ++ + +++V Sbjct: 61 KSIFEKANQELEFIRKNNITVSYFQEENYPDRLKHCLDSPVLLFSGGNINLKNKKIISIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + YG + R E L I SG A G+D VAH+ A+ N +I VL +GLN Sbjct: 121 GTRQITSYGIEFCRKLIEDLIPLDPVIVSGFAYGVDIVAHQFAMDYNLQTIGVLAHGLNQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 ++P+ H + A + E G ++EF P NF +RNRI++G+S+ +V+E+A + GS Sbjct: 181 VYPKTHKKYMAKM-EGNGGFITEFWSSSNPDKENFVKRNRIVAGISEATIVIESADKGGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPD 292 L+TA A + R+VFA+PG + + S+G + LIK Q A ++T +++ L + L P Sbjct: 240 LITANLANDYNRDVFAVPGRVTDRYSQGCNDLIKTQKANVLTSAADLIYVLNWDLEKKPK 299 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWI 351 + D+ ++ + +D++A P+ ++ LL +EL G I Sbjct: 300 VIQQQ----LFIDLNPDEQKIYDFLLKNGKELLDIIALECDLPIFKISGTLLNMELKGII 355 Query: 352 AAVPGGYVRL 361 +PG + Sbjct: 356 RPLPGKMFEV 365 >UniRef50_Q1IVU7 DNA processing protein DprA, putative n=3 Tax=Deinococcus RepID=Q1IVU7_DEIGD Length = 358 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 169/366 (46%), Gaps = 23/366 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRF-LSFPR 57 + + L L L + ++ A GL R + PR Sbjct: 9 ELQALLTLRFTPGLGPRRIEQLRRHFGSAEAALAAPLTALRDVPGLDARSVAALGTAKPR 68 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--SFQLAVVGS 115 + E+ L + L+ YPP L A D P L+V+GEL + +VG+ Sbjct: 69 EQAEAELVKARKEGVTLLGRGLPGYPPALEALGDPPPVLWVKGELPDFPVVPRAVGIVGT 128 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S + R LA GV + SGLARGID AH A+++ G S+ VLG+ +N I+ Sbjct: 129 RGASPHALSLTRTLAADLARAGVIVISGLARGIDTAAHAASVEAGGHSVGVLGSAVNVIY 188 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A LA L LVSE+PL P ++FP RNR+I+ LS +VVE L+SG+L+ Sbjct: 189 PSENAHLARHLT-----LVSEYPLGTGPAQHHFPTRNRLIAALSAATVVVEGELKSGALI 243 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TA ALE GR V A+PG G+P + GPH L+++GA+L ++IL L + Sbjct: 244 TATHALECGRTVCAVPGRAGDPRAAGPHRLLREGAVLTETAQDILNELGW---------- 293 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D+ A + +D + G +P++ T L+ L+L G V Sbjct: 294 GEAPAAPTSDLPPEQARTYAALT-TPATLDDLQAATGLTLPDLQTALVMLQLLGLAEEVG 352 Query: 356 GGYVRL 361 G + R Sbjct: 353 GRWARR 358 >UniRef50_C1Q945 DNA protecting protein DprA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q945_9SPIR Length = 426 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 95/413 (23%), Positives = 163/413 (39%), Gaps = 60/413 (14%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKS---- 59 + L I + + + + +I + L + + +F + Sbjct: 11 YLIALNQIDKVGDKRISELINHYESVENIFEDKEENIKDLLKKKFKSQIGNFYKNEILDK 70 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 71 ANEIVNKSRDYGIGILSLFDEEYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPA 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 ++ L++ +T+ SG+A+G+D AH A+ + AVLGNG++T++P + Sbjct: 131 NESRKYSFELASKLSSLNITVVSGMAKGVDREAHLGAISSLVNTAAVLGNGIDTVYPSEN 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 ++ L+E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T Sbjct: 191 LKIYNKLIEK-GIIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDY 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL--------- 290 AL QGR+V+ P N G H L K GA + ++ILE+ Sbjct: 250 ALNQGRDVYIAPYDEKNNAYFGNHKLYKDGAKIAYGVQDILEDFDSIFSNDDDYLKMKLK 309 Query: 291 -------------------------------------------PDAPENSFYSPDQQDVA 307 D + ++ Sbjct: 310 YFEGGDISNKSKEKNKKEENREKKENKKYKEQTAEINKKHDKKNDNKIKEKNNELISNLN 369 Query: 308 LPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L + + +D + E + V + L++LE+ G I + G Y Sbjct: 370 NEETSLYNIIKKSDKIHIDDIVEESNIKVHTAASVLMQLEIKGIIKQLSGKYY 422 >UniRef50_A3WIH9 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Idiomarina RepID=A3WIH9_9GAMM Length = 347 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 126/326 (38%), Positives = 169/326 (51%), Gaps = 8/326 (2%) Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALF 97 Q + R Q S R + ++ WLE N ++ + YP L P LF Sbjct: 29 SEQLEAIEDRCLQSIKSVQRAYVLQAMHWLENDNCGVVGWFDDQYPKLLRTIERPPMVLF 88 Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 +G L +A+VGSR S YG + A G+ + SGLA GID AH+AAL Sbjct: 89 YKGRTELLSQASVAMVGSRKASHYGIQVTDQLARECAQSGLAVVSGLAMGIDAAAHRAAL 148 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G +IAVLG G++ I+PRR+ L + G ++SEF P +FPRRNRIISG Sbjct: 149 DY-GATIAVLGTGIDQIYPRRNRELYELI-SHQGLIISEFSPGTPARMDHFPRRNRIISG 206 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 +SKGV+V+EAA RSGS+ TA AL +GREV A+P + EG HWL+K+GA L+T Sbjct: 207 MSKGVVVIEAARRSGSISTALSALREGREVGAVPNSVFAKSQEGCHWLLKEGAHLITCAS 266 Query: 278 EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 +IL + L L ANV ++ +D + ER G V E Sbjct: 267 DILSWFDISASEPSQQTRCTIPKH------LANNPLFANVSNDPVSLDELVERTGLSVAE 320 Query: 338 VVTQLLELELAGWIAAVPGGYVRLRR 363 V QLL LEL G I A+PGGY+++ R Sbjct: 321 VSEQLLLLELEGLITAIPGGYIKVGR 346 >UniRef50_B6RA39 DNA processing chain A n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA39_9RHOB Length = 397 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 25/357 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 WLRL+ ++ + + + + + +++ R S + E Sbjct: 15 TQRLAWLRLIRSENVGPRTFRELLNHFGSAQAALDALPELSRRGGKKSYRLFSQDK--AE 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-----FQLAVVGSR 116 + L L + LI YPP L P L V LA++G+R Sbjct: 73 AELAALYKIGARLIALGEPAYPPLLRHIDAPPPLLAVRARDPLQQELTGTQKTLAIIGAR 132 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G ++ L+T+G TI SGLARGID AH AAL +IA G++T++P Sbjct: 133 NCSAAGAKFATQLAGELSTQGFTIISGLARGIDSAAHHAALSSG--TIAAFAGGIDTVYP 190 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + L +S++ GA +SE P+ P A +FPRRNR+ISG+S GV+++EAA +SGSL T Sbjct: 191 KENLELFSSMIATNGAAISEMPISWQPRARDFPRRNRLISGMSLGVILIEAAEKSGSLYT 250 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------- 288 AR ALEQ RE+ A+PG +P S G + LI+QGA LV +++L+ ++ + Sbjct: 251 ARYALEQNREILAVPGSPLDPRSVGANKLIQQGAALVQSVDDVLDIMEPKISMSLPLHQG 310 Query: 289 --------WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 D+P+ + SP ++ + + D + G + Sbjct: 311 IEEPTSNWPKLDSPDTNSPSPPLNANEQDRLAVIDALSETPIDQDELLRFTGVSLQT 367 >UniRef50_D1Y394 DNA protecting protein DprA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y394_9BACT Length = 355 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 106/363 (29%), Positives = 176/363 (48%), Gaps = 15/363 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E+ + L L + + I + + ++ R A R R++ Sbjct: 1 MNGLELCVWLNGCEGLSANVLQH-VDLSDGPEKIVEKLRRDGIVSQRCADRLEKLARENW 59 Query: 61 E-SSLCWLEQPNHHLIP-ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E LI +E YP +L + P L+ +G + S ++VG+R Sbjct: 60 HGKEIERAENAGIFLISWYSNERYPSRLRGIAEPPLILYAKGNVPDFES-AYSIVGTRRC 118 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG + L L+ G+ + SG ARGIDG AH AL+ +GV++AVLG G++ + P Sbjct: 119 TPYGFKVAALIGNALSRAGMVVVSGGARGIDGAAHGGALENDGVTVAVLGTGVDVVWPPE 178 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H L ++L + GAL+SE+PL + FPRRNRII+GLSK ++VVE+ L+ G+++TAR Sbjct: 179 HDELFDNIL-RRGALLSEYPLGTCGRTWRFPRRNRIIAGLSKALIVVESPLKGGAMITAR 237 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A+E GR+V+A+PG I EG + LI GA + + ++++ A Sbjct: 238 LAMEMGRDVWAVPGRIDERICEGSNRLILDGASPLVNVADFIDHVSHFGQLDLFA----- 292 Query: 299 YSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ +L + D +D +++R G E++ + EL++ I GG Sbjct: 293 ----PLELGDDERRVLDCLSDQGDLTLDQISKRTGISAVELMRLISELQVQSLIYTSGGG 348 Query: 358 YVR 360 R Sbjct: 349 RWR 351 >UniRef50_Q0C098 DNA protecting protein DprA n=4 Tax=Alphaproteobacteria RepID=Q0C098_HYPNA Length = 371 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 115/364 (31%), Positives = 165/364 (45%), Gaps = 8/364 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 WLRL ++ ++ A + + R + P I Sbjct: 11 QRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAAR-GKSITIPPADVIAR 69 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + + ++ + YP L A P L + G A+VG+R S G Sbjct: 70 EIDAVAKYGARIVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAG 129 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R L G TI SGLA GIDG AH A+L ++AVLG G++ ++P +H RL Sbjct: 130 RKIARDMAAALGKAGYTIVSGLALGIDGEAHAASLSTG--TVAVLGGGIDHVYPPKHDRL 187 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + Q G +VSE P A +FPRRNRII+GL++G +VVEAA RSGSL++AR A E Sbjct: 188 YAE-VAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLISARVANE 246 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL----HWLPDAPENSF 298 QGREV A+PG +P + G + LI+ GA LV ++LE L P ++ Sbjct: 247 QGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAA 306 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + + + + P+D +A AG L+ELELAG PGG Sbjct: 307 HGGGEAIPPSELARVREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGM 366 Query: 359 VRLR 362 Sbjct: 367 AARA 370 >UniRef50_D1VYZ9 DNA protecting protein DprA n=4 Tax=Prevotella RepID=D1VYZ9_9BACT Length = 377 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRF--LSFPRKSIE 61 + L I+ + M+++ + + + + + Q L P E Sbjct: 11 IALTRINYFHLTGMLQLYRRLGSATAVIEHRRNIRDVLPDASPKLVQSLQQLDEPLHRAE 70 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + + E YP +L D P LF +G ++ + VVG+R ++ Y Sbjct: 71 IELQWDLENGVMPLCMNDENYPQRLRQCDDAPLMLFYKGNINLNQRRVICVVGTRRNTVY 130 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L + + SGLA G+D +AH+ ALQ ++ VL +G++ ++P RH Sbjct: 131 GEDLIRRFMRELRQLCPQLLVISGLAYGVDIIAHRQALQNGYPTVGVLAHGVDYLYPARH 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 191 KQTADEMVKKGGLL-TEFLTQTNADKVNFVRRNRIVAGISDACVVVESAAHGGGLITASL 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLH-WLPDAPENS 297 A REVFA PG IG+ SEG + LI+ A L++ ++ ++++ + L A + Sbjct: 250 ARTYNREVFAFPGNIGSQYSEGCNNLIRDNVAGLISNADDFVKSMNWDDDVKLQRAQQVG 309 Query: 298 FYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ ++++ + +++++ +A P+ + L LE+ G + A+PG Sbjct: 310 IERQLFPDLSAEERQVVSALKKHNDLQINMLSVQADIPIAHLTAILFSLEMKGVLKALPG 369 Query: 357 GYVRL 361 G L Sbjct: 370 GMYHL 374 >UniRef50_B0PD54 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD54_9FIRM Length = 415 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 112/408 (27%), Positives = 163/408 (39%), Gaps = 48/408 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFP 56 M D W L L RI + + ++ ++ +R + Sbjct: 1 MTDVVFWAWLQDAIGLGSVRADRIIREFSSPEALYGKSARELEALGMFAPKEIERLRATT 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGS 115 + E+ I D YP L P L+V+G L L + +VG+ Sbjct: 61 LDRAREQIKTAERLGCMAIGPDHPDYPEALTNIDAMPCILYVKGSLSGLSDELVITMVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG LA G T+ SGLA GID +H ALQ +G +I +L GL+ + Sbjct: 121 RSATEYGLASAYRLSHDLAAAGCTVVSGLATGIDTASHAGALQASGRTIGLLACGLDVDY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P L +L+ GGALV+EFP +F RNR++SG++ GV+VV+A RSG+L+ Sbjct: 181 PSASGELKRRILDAGGALVTEFPFGTGVNRGSFSIRNRLLSGIAAGVVVVQAPERSGALI 240 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------------ 283 TAR AL+Q R+VFA+PG I +P G + L + GA +V ILE Sbjct: 241 TARYALQQNRDVFAVPGEIFDPSMAGCNKLARDGAKVVVNVYSILEEYIGRFPKRIDART 300 Query: 284 -------------------------------QFGLHWLPDAPENSFYSPDQQDVALPFPE 312 D P ++ V Sbjct: 301 VAARIKSADRNAAKPPQNAPRRIKGVKACAKPATAPKQADVPRMDDGELAKRGVTPQARA 360 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + A +G D +A AG E ++ L ELEL G+ V GG Sbjct: 361 VYAQLGARALERDELAALAGLGAAETLSALTELELTGFARVVAGGRYI 408 >UniRef50_C7HUU2 DNA processing protein DprA n=2 Tax=Anaerococcus RepID=C7HUU2_9FIRM Length = 359 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 102/363 (28%), Positives = 179/363 (49%), Gaps = 11/363 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTLRQAQRFLS-FPRK 58 M ++ L I +L ++ + + + + L+ + ++ S + Sbjct: 1 MDKKDLLLYFNFI-NLQNKIILDFCENL-DMDNFFDLDRKIFENLSKKNKEKIFSSKNLE 58 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + ++ + + + + YP L D P + +G L +A VG+R Sbjct: 59 NFKAYRQKVFNGPYKISTIYDDNYPINLSYIDDRPALFYYKGNLEKEDKNAIAFVGARKC 118 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + YG+ + E + SGLA GID ++HK +L+ N +I V+G+GL+ I+P+ Sbjct: 119 TDYGKWACKKIVEGFKDTNIRTVSGLAYGIDAISHKVSLENNIKTIGVIGSGLDIIYPKA 178 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L + E+ GA++SEFPL+ PP AYNFPRRNRIISGLSKGV V+EA +SG+++T Sbjct: 179 NKYLYEKI-EEKGAIISEFPLETPPNAYNFPRRNRIISGLSKGVCVIEAKEKSGTMITTN 237 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 AL+QGREVF LPG I + S+G + LI++G+ LV + +I++ ++ Sbjct: 238 FALDQGREVFCLPGNINSIYSKGCNKLIQEGSKLVMDASDIIDEIEDFKK-----INEKK 292 Query: 299 YSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + + ++ + D+ + D +++ + EV L+ LEL +I + Sbjct: 293 TKLNLDGLDKDTLNVVKYIIDKPSSNADEISQNLCMSIEEVNYILIFLELNDYIENMGNN 352 Query: 358 YVR 360 Sbjct: 353 EYV 355 >UniRef50_C4ZAQ3 DNA protecting protein DprA n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAQ3_EUBR3 Length = 359 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 160/359 (44%), Gaps = 11/359 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK-SIES 62 L S++ + + + + T + L +E Sbjct: 5 YWLTSLTDISNAKKKLLHDCSITAEKLFFMPKNELFDILFFTDDDRKIILESRASYDVEK 64 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +Q + + + E YP +L + P +LF G L +A+VG+R S YG Sbjct: 65 EWILFQQKDIGFVTMEDEAYPDKLRNIHNPPYSLFYIGALPDKSRKSVAIVGARGRSAYG 124 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ L+ +G+ I SG+ARGID AH L+ G + AVLG+G +T +P+ + L Sbjct: 125 CEVAKVLAAALSRQGIQIISGMARGIDRDAHMGCLEAGGNTYAVLGSGADTCYPKENRFL 184 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GG ++SE P FP RNRIISGLS V++VEA RSGSL+TA A+E Sbjct: 185 YDKIKLSGG-IISELMPGTDPQKMFFPMRNRIISGLSDIVVIVEAKKRSGSLITADFAME 243 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++V+ +PG I + S G + LIKQGA ++ +E + ++ E + Sbjct: 244 QGKDVYVIPGRITDTLSYGCNSLIKQGAGIIYNIDEFVSDITMTG-----FTECTQMDFR 298 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + + + + ++++ + E+ L +L G++ Y Sbjct: 299 KNILDKKEALVYSLLDFCPIAIGTLSQKVPYELSELFEVLEDLIQKGFVKETIPNYYIR 357 >UniRef50_C9KMX7 DNA processing protein DprA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMX7_9FIRM Length = 365 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 122/374 (32%), Positives = 172/374 (45%), Gaps = 22/374 (5%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-------QAQR 51 M + L L + + + + + +R Q Sbjct: 1 MDARQDFYLAALAQCPGLGSRRLGLLLETGRDAVSLWQMPALEMSRLVRMPQGLVEALQS 60 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 F ES +Q HL YP L P L+ G L + ++A Sbjct: 61 FRRTHPDLPESLAESCQQRGVHLCTIRDASYPYLLKEIFSAPPVLYFRGTLEP-EARRVA 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VGSR S YGE F E LA G+T+ SG ARGID +H+ AL+ G ++AVLG G+ Sbjct: 120 IVGSRRLSPYGEALALEFGEQLAAAGLTVVSGAARGIDTRSHRGALKT-GRTVAVLGCGI 178 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P + RL + E GGA++SE+ V PL FP RNRIISGLS+G LVVEAA RS Sbjct: 179 DVAYPAENRRLLMEIAESGGAVISEYGPGVQPLPAFFPARNRIISGLSEGTLVVEAAARS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TA AL +GREV+ALPG + + SEG H LI+QGA LVT+P +ILE++ Sbjct: 239 GSLITAELALGEGREVYALPGSVFSKMSEGCHHLIQQGASLVTKPCDILEDMGLV----- 293 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERA-GQPVPEVVTQLLELELAG 349 + Q+ + + + + D + +P + LL++EL G Sbjct: 294 ----QKVAAKKQKSMTPDERRIYQVLSFDHPLSADEILMSLPDGEMPSLSFTLLQMELKG 349 Query: 350 WIAAVPGGYVRLRR 363 I R Sbjct: 350 LIIENELHAYRRAE 363 >UniRef50_C6JD44 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD44_9FIRM Length = 305 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 145/296 (48%), Gaps = 5/296 (1%) Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 I YP + + P L+V+G L +AV+G+R S YG Sbjct: 12 EEYSTGQIRCIEKSDPEYPQIMKQYSSMPAKLYVKGRLPDPKRRTVAVIGARMCSPYGRM 71 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + + L+ GV I SG+A GID HK AL+ + AVLG+G++ +P+ + +L Sbjct: 72 QAFRYAKALSVAGVQIISGMALGIDSEGHKGALEGKMPTFAVLGSGVDVCYPKSNRKLYE 131 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 +L + G ++SE PL P++++FP RNRIIS LS VLVVEA SGSL+TA ALEQG Sbjct: 132 RILWENGGIISECPLGSGPVSWHFPARNRIISALSDAVLVVEAKENSGSLITAGFALEQG 191 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 + V+A+PG + + S G H LI GA + PE +LE L + + E + Sbjct: 192 KMVYAIPGAVTDELSRGCHKLIYDGAGIAYCPEIMLEELGISMEKVTQNGEKNNL----- 246 Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +A + + + D + + G +V L+EL L G I Y Sbjct: 247 GLARDLNMVYSCLDLRPKNPDYIVRKTGFSPAQVSNCLVELTLRGLIRESGRHYYV 302 >UniRef50_C1XIP5 DNA protecting protein DprA n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIP5_MEIRU Length = 337 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 154/352 (43%), Gaps = 23/352 (6%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCW 66 L L + + + + L A + + E Sbjct: 5 LALALTPQIGPQRLQQALPTDLSVEAV------ADVLGPEIAAGYARTLQSGLAEQERAQ 58 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 + LI E YP L P L+++GEL + +VG+R S + W Sbjct: 59 AARLGVRLIGLWEEDYPEVLRHLESPPTVLYLKGELPPS-ERNIGIVGTRKASPWATAWT 117 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 LA G+ I SGLA GID AHK AL G ++ VLG+ ++ +P ++ LA + Sbjct: 118 HKVARELAEAGIGIISGLALGIDAAAHKGALDGGGYTLGVLGSAIDHFYPAQNRALAERM 177 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 ++SEFPL PP A FPRRNRI++ S+ VLVVEA +SGSL+TA+ A E GR+ Sbjct: 178 S-----VLSEFPLGTPPQAGLFPRRNRIVAAFSRAVLVVEAGEKSGSLITAKFAAELGRD 232 Query: 247 VFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 V A+PG G+ S G + LI+ GA LV E++L L + + + Sbjct: 233 VLAVPGRPGDTFSLGCNRLIQDGAGLVLNTEDVLNALGMLAPKKQAVQLEGSEAKVYRAL 292 Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 L D +A+ G EV++ L+ LEL G + + G Y Sbjct: 293 LELPEAL----------PDDLAQSTGLSTGEVLSVLMMLELKGLVQSSAGRY 334 >UniRef50_B0VIX1 DNA processing protein DprA, putative n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIX1_9BACT Length = 362 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 157/345 (45%), Gaps = 16/345 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHID---AVVLQQTG-LTLRQAQRFLSF- 55 M + WL L S L + + + L Q G L + F Sbjct: 1 MERYKAWLCLKSAPLLGTKGTLELLQSFPDPQEFVGNPSHPLYQNGKLKPATIKHLREFT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH-ALHSFQLAVVG 114 + + L +E+ + YP L D P L+ +G+L L +AVVG Sbjct: 61 LPEDNKRILTLMEKHQLQYLCLTDPDYPAALKEIFDPPLILYYQGDLTGTLKDLCIAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + YG R L +GV + SGLA GID +AH+ AL+ +IAV +GL+ I Sbjct: 121 TRKPTSYGLEMCRKLLSPLCAKGVNVVSGLAMGIDTIAHQTALKAKAKTIAVFASGLDNI 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + LA ++ E GALVSE+ +NFP RNRIIS L+ VLVVE +L SG++ Sbjct: 181 YPPMNKTLAENICE-NGALVSEYEPGSKLERWNFPTRNRIISALANAVLVVEGSLNSGAM 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA+ A+EQ + ++ALPG I N ++GP+ LI+QGA L++ ++L +L Sbjct: 240 LTAKFAIEQNKPLYALPGNINNRNAQGPNLLIRQGATLISSANDLLMDLGLVPSPKEQM- 298 Query: 295 ENSFYSPDQQDVALPFPELLANVGDE--VTPVDVVAERAGQPVPE 337 +++ L + D + G + Sbjct: 299 ------ELIPELSSEEQTLYDILSSAQKELTFDEFMLKTGLGFGK 337 >UniRef50_B0AAN9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN9_9CLOT Length = 374 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 107/370 (28%), Positives = 173/370 (46%), Gaps = 11/370 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E++L L SI + +++ + K + + ++ L + + + + Sbjct: 1 MQEREMYLFLCSIYRISQEEIDILKAQFGKLEVLMYLDEKEILKNKNLNSKLLKNIVKYR 60 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVG 114 IE+ LE+ + + + YP L P LF +G++ L +AV+G Sbjct: 61 SHSRIENIKGVLEEKDIQYVCFSDDDYPESLKHIQMPPPILFYKGDISILDHRNNIAVIG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVSIAVLGNGLNT 173 SRA + YG R + + L+ G+ I SGLA GID AH A + G ++AVLG+ ++ Sbjct: 121 SRAPTNYGLYCVRKYAKELSDIGMDIVSGLALGIDSEAHLACMNGRFGKTVAVLGSPIDN 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I P R+ ++A +LE GG +VSEF L NF RNRIISGLS VLV+EAA +SG+ Sbjct: 181 ILPSRNRKIADKILENGGIIVSEFFLGSKVHPLNFSFRNRIISGLSVAVLVIEAAQKSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 T A +QG+ VFA+ G I +P S G +I +GAI T E I + L+ Sbjct: 241 KRTFDYAGDQGKTVFAMTGRINDPKSRGCIDMIIEGAIPFTSVENIFRDKSVFLNAKEFC 300 Query: 294 ---PENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 D + + E+L + +D + G + + + + EL + Sbjct: 301 TLNNCKDSIEYDIKSLNYEKKEILELIKRQGNIKIDDICNYTGMDIKTINSNVNELLIDD 360 Query: 350 WIAAVPGGYV 359 +I + Sbjct: 361 YIIEMENKTY 370 >UniRef50_A1ZYZ2 Smf protein DNA processing chain A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYZ2_9SPHI Length = 371 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 180/371 (48%), Gaps = 11/371 (2%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSF 55 M ++ + L I + G ++ + + A +L+ + + + Sbjct: 1 MNNSSLYSIALNLIDKVGGVKARQLLSYCGSAEAVFKTPKAKLLKIPMVGNKIVSLIMQK 60 Query: 56 P-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 + E+ + + + ++ YP +L D P +++G+++ +A+VG Sbjct: 61 DILQQAEAEVEKAYKQDVQIVAYTDAHYPVRLKQYADAPFVFYIKGKVNLNAERAVAIVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +RA S YG+ + + L I SGLA GID AH+A+L+ +I V+ +G++ + Sbjct: 121 TRAASEYGKTFTEELVKELKPYQPLIVSGLAYGIDIAAHQASLKYGLPTIGVMASGIDVV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H A +++Q G +++E P A FP RNRII+ L+ V+VVEA + G+L Sbjct: 181 YPTPHLGTARQMVQQQGGVMTEARFGTQPDARKFPARNRIIAALADAVVVVEAKVSGGAL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 +TA A + ++VFA+PG I SEG + LIKQ A L+T+ +++ + + L+ + Sbjct: 241 ITANIANDYHKDVFAVPGDIHRKTSEGCNNLIKQHKAHLMTKAKDVAYIMNWELNGKNKS 300 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV---TPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + E++ + + +D ++ + P+ +V LL LE+ G+ Sbjct: 301 VQQSLLFNELPE-NAEEKEIVVLLQKQPKKTLSLDEISWQLKMPLSKVSACLLNLEIQGY 359 Query: 351 IAAVPGGYVRL 361 + ++PG L Sbjct: 360 LKSLPGKKFTL 370 >UniRef50_A7HND2 DNA protecting protein DprA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND2_FERNB Length = 333 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 164/337 (48%), Gaps = 19/337 (5%) Query: 26 HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQ 85 + + + +T Q + F + L + + LI E YP + Sbjct: 15 KKLEDIDELISYNKSDFLITPEQIKEF----NDLVHKLEMRLSKGDISLITYWDEEYPEE 70 Query: 86 LLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 L D P +F +G + L AVVG+R + YG++ +F L+ I SG+A Sbjct: 71 LRHIPDPPVFIFAKGNVEFLSYDLFAVVGTRKMTNYGKQVTEMFSTDLSKH-FVIVSGMA 129 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 G+D +AH AL+ +IAVLG G++ I+P+ + RL ++ + G ++SE+ P Sbjct: 130 YGVDSIAHATALRNLRPTIAVLGCGVDYIYPKSNERLYQEII-KNGCVISEYLPWEKPQK 188 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 Y F RNRIISG+SKGVLV EA SG+L+TA+ +EQG+++FA+PG I S G ++L Sbjct: 189 YTFVARNRIISGVSKGVLVTEAGTDSGALITAKFGVEQGKDIFAVPGDIFKSTSTGTNYL 248 Query: 266 IKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 IK GA LVT P EILE F H ++ LL + + Sbjct: 249 IKNGAFLVTHPSEILEYYGFKEHRK------------IIELNYDEKLLLEALETN-LNPE 295 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++E+ +P+ E++ L +EL G + V G Sbjct: 296 QLSEKISKPLSEILLLLTIMELKGLVYRVEDGTYARA 332 >UniRef50_C2KWN4 SMF family DNA processing protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KWN4_9FIRM Length = 300 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 11/300 (3%) Query: 67 LEQPNHHL----IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 +E+ N L + E +P +L D P L+++G L + ++G+R + YG Sbjct: 1 MEKKNIELSIRELLPFQEDFPKRLSEIPDSPECLYLKGFLPKEGEHTVGIIGARDGTEYG 60 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R +TLA +G+ I SG+A GID AH+ AL+ G + AVLG G+N +P + RL Sbjct: 61 KDIARSIAKTLAKKGIGIVSGMAYGIDSAAHEGALEGKGKTYAVLGCGVNICYPSCNFRL 120 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++ E+ G ++SE+PL PPL ++F RNR+ISGLS +LVVEA +SG+ +T ALE Sbjct: 121 YENI-EKNGGILSEYPLHSPPLPHHFVERNRLISGLSDVILVVEAKEKSGTFITVDRALE 179 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QG++VFA+PG I + S+G + LI++GA + T +IL E P Sbjct: 180 QGKQVFAVPGRIVDRLSQGCNRLIREGASVCTSAGDILSYFSLEAEKEESKEEEIKNFP- 238 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + +G E + E P + L+ELE+ G+ V Y R + Sbjct: 239 -----KEKRRIYLALGFESKHFQSLQEELKLPNYMLHRYLIELEVEGYCECVQAAYYRRK 293 >UniRef50_A4CHW7 DNA processing protein DprA, putative n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CHW7_9FLAO Length = 412 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 107/410 (26%), Positives = 165/410 (40%), Gaps = 51/410 (12%) Query: 1 MVDTE--IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ---AQRFLSF 55 M++ E +RL I L + S + + G LR + Sbjct: 1 MIEKELIALIRLQLIPGLGPIGARNLIAICGSPSAVFSQTKMLAGNGLRHNLLSSLEEEA 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + ++ L + E+ + YP L D P L+ G ++ ++VVG+ Sbjct: 61 YLRRAQAELRFAEKRGARCLGCLDPDYPAGLRECADSPLVLYTRGRINFGRHPLVSVVGT 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG F +A I SG A GID A A++ +IAV+ +GL++++ Sbjct: 121 RSMTGYGRETCEAFIAGIAPANPIIISGFAYGIDICAQSTAMRYGLQTIAVMAHGLDSLY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H + +L+ GG L +EFP P +F RRNR+I+G+S +VVE+ R GSLV Sbjct: 181 PASHRKYRDALVANGGFL-TEFPSGTPAEPGHFLRRNRVIAGMSPATVVVESGERGGSLV 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPD-- 292 TA A REVFA PG + +P S G + LI+ Q A L+T E L + + P+ Sbjct: 240 TADLAFGYDREVFAFPGRVSDPQSAGCNALIRTQKAQLLTNAREFLLAMDWEEAQSPETK 299 Query: 293 -----------------------------------------APENSFYSPDQQDVALPFP 311 N +P D+ Sbjct: 300 GSGGLVDAGSLSKTRNPVETGNFRETKNPAETGNPGVKGGLPNPNRAVNPVPGDLDPTEN 359 Query: 312 ELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 L + +D VA R V E V+ L LE+ G + ++PG R Sbjct: 360 TLARCLAESGCMHLDEVAVRCQLGVSEAVSGLFNLEMRGLVRSLPGKLFR 409 >UniRef50_C5VCW3 DNA protecting protein DprA n=3 Tax=Corynebacterium RepID=C5VCW3_9CORY Length = 405 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 104/395 (26%), Positives = 160/395 (40%), Gaps = 24/395 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV-VLQQTGLTLRQAQRFLSFPRKSI 60 + W L + ++ + + I +++ L A+ + Sbjct: 10 ERRQAWAYLSRVFEGPSRELTNLLNNRRDPEAIAQGIRRRESWLGDILARTHTRYQDDRA 69 Query: 61 ESSLCWLEQPNHHLIPADSEFYPP----------------QLLATTD---YPGALFVEG- 100 ++ L + L+ D +P L + + P AL+V G Sbjct: 70 KADLTTMAAIGGRLVTPDDPEWPAEPLDAAFRFAASGKSDTLRSYQEDAVPPHALWVRGS 129 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 L L + +++VGSRA S YG RL L TI SG A GID AH L Sbjct: 130 NLRQLCAQAVSIVGSRAASNYGSHAARLISAGLIDHHWTIISGGAFGIDSAAHTEVLARG 189 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +IAV GL+ +PRR+ + ++ + GALVSE+P P + F RNR+I+ LS Sbjct: 190 GTTIAVQACGLDRPYPRRNHDMLTTIAQHNGALVSEYPPGATPQRHRFLTRNRLIAALSS 249 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +++EAA RSG+L T A G+ A+PGPI S G H I+ G A +V +E+ Sbjct: 250 GTVIIEAAWRSGALNTLSWAAAFGKITMAVPGPITTAQSLGCHERIRNGDAAMVCSADEV 309 Query: 280 LENLQFGLHWL-PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 + L + E F + Q ++ + G P D +A AG + Sbjct: 310 RQLLAKIGDIDVGEQYEMQFAATPVQKLSRNEMRIYDATGPRPIPTDQLAHDAGLTIGLT 369 Query: 339 VTQLLELELAGWIAAVPGGYVR-LRRACHVRRTNV 372 V LL L G + + R + V Sbjct: 370 VHLLLSLAQQGLVERNGNAWQRAVSPDPREVHAGV 404 >UniRef50_D1W888 DNA protecting protein DprA n=2 Tax=Prevotella RepID=D1W888_9BACT Length = 379 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 100/365 (27%), Positives = 179/365 (49%), Gaps = 12/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR------KSIE 61 + L I+ + MV++ + + + + + + +S + + + Sbjct: 13 IALTRINHFHLTGMVQLYRRLGSATAVIEHRHDIREVLPDASPKLVSSLQNVDQYLRRAD 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L W + + E YP +L D P LF +G ++ ++VVG+R ++ Y Sbjct: 73 EELEWDVSNGVMPLCMNDENYPQRLRECDDAPLMLFYKGSVNLNQRRVISVVGTRRNTVY 132 Query: 122 GERWGRLFCETLATR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 GE R F L V + SGLA G+D +AH+ ALQ ++ VL +GL+ ++P RH Sbjct: 133 GEDLIRRFMAELRQLCPQVLVVSGLAYGVDILAHRHALQNGYPTVGVLAHGLDYLYPPRH 192 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A ++++GG L +EF NF RRNRI++G+S +VVE+A G L+TA Sbjct: 193 RQTADEMVQKGGLL-TEFLTQTNADKVNFVRRNRIVAGVSDACIVVESAAHGGGLITASL 251 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW-LPDAPENS 297 + REVFA PG +G+P SEG + LI+ A L+ + ++++ + L A Sbjct: 252 SRTYNREVFAFPGNVGSPYSEGCNNLIRDNVAGLINHAYDFVKSMGWEDDARLSRAHHEG 311 Query: 298 FYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D++ +++ +G + +++++ +AG P+ ++ L LE+ G + A+PG Sbjct: 312 IERQLFPDLSAEELQVVGVLGKNNDLQINMLSVQAGIPIAKLSAILFTLEMKGVLKALPG 371 Query: 357 GYVRL 361 G L Sbjct: 372 GIYHL 376 >UniRef50_D2LKH3 DNA protecting protein DprA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKH3_RHOVA Length = 487 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 112/383 (29%), Positives = 168/383 (43%), Gaps = 27/383 (7%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + LRL+ + ++ + + + R + + + + E+ Sbjct: 108 EKRDRLRLIRTPHIGTVTFWQLIAHFGSAAAAIDALPEFVKHGSRVSPKSV-PSIGTAEA 166 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + L+ YPP L P L+++G+ +VGSR S G Sbjct: 167 EMERAAAAGLTLVAVGEAGYPPLLAEIEAPPPLLYIKGDPRIWQRPAFGIVGSRNASGAG 226 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 ++ L+ G+ + SGLARGIDG AH+ AL + AVL GL+ I+P H L Sbjct: 227 LKFTAEISAELSRLGLLVVSGLARGIDGAAHRGALPFG--TCAVLPGGLDRIYPPEHLGL 284 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 AA + Q G L+ E P A +FPRRNRIISG S GVLVVEAA RSGSL+TAR A E Sbjct: 285 AADI-AQNGLLIGECPPGFVARAQDFPRRNRIISGASLGVLVVEAAERSGSLITARLAGE 343 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-QFGLHWLPDAPENSFYSP 301 Q REVFA+PG + + G + LIK+GA+L T E+I++ L +HW E Sbjct: 344 QSREVFAVPGHPLDTRAAGTNRLIKEGAVLTTSAEDIVDALKGKLVHWARFGVEVPQPQR 403 Query: 302 DQ----------------------QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVV 339 + ++ + +D + G+ EV Sbjct: 404 APKLAAHDDGPVRAPAGAKGGDGLASLDATIASVMQLLSFSPIAIDDICRMTGKQTREVH 463 Query: 340 TQLLELELAGWIAAVPGGYVRLR 362 ++ L+LAG + ++ LR Sbjct: 464 AAIMSLDLAGRLERRGSSHIVLR 486 >UniRef50_D1VVV2 DNA protecting protein DprA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVV2_9FIRM Length = 360 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 188/370 (50%), Gaps = 21/370 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAH----------WVAKQSHIDAVVLQQTGLTLRQAQR 51 +D + L SI L ++++I + +T + ++ Sbjct: 1 MDRNAIIFLSSI-GLSSSNIIKILDFSIEKNLALNEFLNLEE-NQYKPLLKKVTFDKIKK 58 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 F + +E++L ++ + E YP L D P L++ G+ L + +A Sbjct: 59 FYCKYEEILENTLNKSQKLQVKISTILDENYPSSLRRIEDPPAILYIRGKDIKLEN-NIA 117 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R H+ YG F + L++ TI SG+A GID ++HK AL+ N +IAVLGNG+ Sbjct: 118 IVGARKHTSYGIYAVNKFVDELSSYNFTIVSGMAYGIDALSHKRALEKNMKAIAVLGNGI 177 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + I+P+ + L +LL++ +VSE+P + + FP+RNRIISGLS+GV+VVEA +S Sbjct: 178 DIIYPKANTNLYMNLLDKA-TIVSEYPFGMKATKFTFPQRNRIISGLSEGVIVVEAKEKS 236 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 GSL+TAR A EQG+EVFA+PG I + S+G + LI+ GA + + E+IL + Sbjct: 237 GSLITARLAAEQGKEVFAIPGNINSIYSKGTNLLIRDGATPLLQIEDILPFYPSIIKKEE 296 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + ++++ +L + D ++ + ++ V + + L +LEL I Sbjct: 297 EKHI-------IENLSEDENLILNLMEDGNITIEEICNKSNFDVIYINSLLTKLELKSVI 349 Query: 352 AAVPGGYVRL 361 + R+ Sbjct: 350 EKISLTEYRI 359 >UniRef50_D1PPW6 DNA protecting protein DprA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPW6_9FIRM Length = 366 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 145/368 (39%), Gaps = 12/368 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSF 55 M T WL L + + + L+ A++ L Sbjct: 1 MDKTLAWLWLADAVGSACQYARELLDLWPDPEELYESLRSGMVAPPFCLSDGAARQLLDT 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVG 114 E L ++ D FYP +L D P L+V G+ L+ +VG Sbjct: 61 TPFDYEERLDHCLLSGIEILTPDDAFYPARLREIPDLPLVLYVTGDKACLNGHRYAGMVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG + A G+ I SGLA G+D H+AA+ +IA LG ++ Sbjct: 121 TRRPSAYGRQAAYDLSLGAAKEGIVIVSGLADGLDSEGHRAAVAAGTPTIAFLGTAIDKT 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPL-AYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P + L + E GGA+ SE+P F RNR+I+ ++ V V EA LRSG+ Sbjct: 181 YPAANGPLRRQIEEGGGAVCSEYPPHYKGKTTGTFLARNRLIAAQAEVVCVAEARLRSGT 240 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPD 292 L T A GR V A+PG I + S G + L++ A + E +I+ L Sbjct: 241 LNTVHHAEGYGRPVLAVPGSIYSAMSRGTNELLRTHRAEPLCEAADIVRQLG----LAAG 296 Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 A E V+ + A +G +D + G P V+ ELEL G Sbjct: 297 AEEKEPAEFSPASVSADARAVYAKLGPTAQGIDALCAATGLPANRVLAACTELELFGGAQ 356 Query: 353 AVPGGYVR 360 A PG Sbjct: 357 AQPGRRYI 364 >UniRef50_C6V4N9 DNA processing chain A n=2 Tax=Neorickettsia RepID=C6V4N9_NEORI Length = 375 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + WL+L + + + Q ++ ++ F + Sbjct: 10 ELLFWLQLSRT--VGEVTFQSLISLYGTAENAL----GQLSTIQQRTKKTRPFSKTDALK 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L E+ + ++ A Y L D P + G + L++ +AVVGSR + Sbjct: 64 ELELTEKFDASILAACENKYSKNLRVIRDPPPVITARGNIELLNTPSIAVVGSRNATINS 123 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + LA G TI SGLA G+D A K +IAV+G G++ +P + +L Sbjct: 124 CNFAYSLARELAEEGYTIVSGLAIGVDTAALKIT-DSMLPTIAVIGTGIDQCYPTENQKL 182 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++E+GG +V+E P + +F RRNRIISGLS+ V+++EA+ SGSL+TA+ AL Sbjct: 183 QERIIERGGLVVTEVPFGKRGQSVHFARRNRIISGLSECVIIIEASENSGSLLTAQYALA 242 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-----------QFGLHWLP 291 QG+ +FA PG + G + L+KQGAILV +++++L Sbjct: 243 QGKYLFASPGAPYDKRFSGSNRLLKQGAILVENALDVIQHLERKKRNDFGYKTLLDVEDK 302 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 S + D + L ++L + P+ +A G ++ ++ELE+ G + Sbjct: 303 AFIPFSTLNCDTDKITLIKAQILKKIDSTSIPMSQLAHELGISEKTLLLAIVELEIEGKV 362 Query: 352 AAVPGGYVRL 361 V L Sbjct: 363 TRTIANEVSL 372 >UniRef50_B8DL25 DNA protecting protein DprA n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL25_DESVM Length = 553 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 109/318 (34%), Positives = 146/318 (45%), Gaps = 8/318 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV------VLQQTGLTLRQAQRFLS- 54 + L L + + R+ + G+ A Sbjct: 20 TELWAALALRHSPGIGPRTVCRLLAGLGSALAAVQAADRGGHDWALAGVRPHMAAPVARG 79 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R + + ++ YP +L +D P L+ G+ L + +AVVG Sbjct: 80 VWRDTARQEWDAVRACRCSILLWTDPRYPARLREVSDAPAVLYCRGDASLLANHAVAVVG 139 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G +L+ GVT+ SGLARGID AH AAL+ G +I VLG G++ + Sbjct: 140 SRLSSRAGRGVAADIAYSLSAAGVTVVSGLARGIDREAHVAALEEVGSTIGVLGTGIDVV 199 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P HA L + E G LVSE+ PL +FP RNRIISG S GVLVVEAA RSGSL Sbjct: 200 YPPEHAELFERM-EATGLLVSEYAPGTLPLPAHFPVRNRIISGFSVGVLVVEAAARSGSL 258 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR ALEQGREV+A+PGP + G LI+QGA VT E++L +L L A Sbjct: 259 ITARLALEQGREVYAVPGPATAQYTCGCRGLIEQGARPVTTAEDMLADLAPVLGMELAAL 318 Query: 295 ENSFYSPDQQDVALPFPE 312 P + Sbjct: 319 AAPCPPPGWDGWDDDPLD 336 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 309 PFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 P +L + VD + +V +L+ LE+ G + +PG Sbjct: 499 PDDAILTFLHGRPGAHVDDICRALSMGAADVSCRLVLLEVKGGVRRLPGMRYER 552 >UniRef50_B0MYH5 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYH5_9BACT Length = 370 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 11/361 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFL-SFPRKSIES 62 + L + V + + + + L A+ L E Sbjct: 8 IALTLTPGIGPKGAVHLLDVFGSAEAVFSASADELIEKARLRPELARAILQKKAFADAER 67 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + + +I + YP L T DYP L+V G AL L +VG+R + YG Sbjct: 68 EVKHCRKHGIEIIASTDAQYPALLRETADYPHVLYVLGSPEALGKTTLTMVGTRRMTPYG 127 Query: 123 ERWGRLFCETLAT--RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 ++ LA I SGLA GID H+AAL ++ ++ + L I P +H Sbjct: 128 QQMADRLIGELADRVADTVIVSGLAFGIDTACHRAALAFGMPTVGIIASALPGITPAQHT 187 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +A ++E GGA+VSE + RNR+++G+S G +VVE+ + GS+ TAR A Sbjct: 188 AVARDMIEHGGAVVSELHSQTRQNGNFYHSRNRLLAGISGGTVVVESPVEGGSMDTARLA 247 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 R + A+PG + S G + LI+ Q A +V E+I+ + + + D + Sbjct: 248 DGYNRTLMAVPGRATDFASAGANLLIRTQRAQMVCTGEDIVREMMWDQNRPGDLIDRPTA 307 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +P + LL D+ + + E +G E+ LL LE+AG + +PG Sbjct: 308 APA--ALTRDEEGLLGCFRTDDPISAEELCELSGLGFGELSALLLGLEMAGAVRQLPGNR 365 Query: 359 V 359 Sbjct: 366 Y 366 >UniRef50_C5D8V4 DNA protecting protein DprA n=3 Tax=Geobacillus RepID=C5D8V4_GEOSW Length = 294 Score = 299 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 7/289 (2%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHID----AVVLQQTGLTLRQAQRFLSFPRK- 58 E + L + R+ S + + + + L+ +Q +F Sbjct: 6 RERLIHLHHCRGAGWKTIHRLLEIDPTFSSVFTLPSSALRTRIPLSSQQYTQFFQDLHSP 65 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRA 117 IES + + N H+I YPP L P L+ +G + L S +++VG+R Sbjct: 66 HIESMIKTYKDKNIHVITIFDSDYPPLLKHIYKPPWVLYAKGNIRLLSSFKMISIVGTRQ 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + R L I SGLA GID +AH+ ++ G +IA++ G I+PR Sbjct: 126 PTKEGIQSLRQLVPPLVANDWVIVSGLAVGIDTLAHEMTIENGGHTIAIIAGGFEHIYPR 185 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ RLA L+ G ++SE P V P ++FP RNRIISG+S G +VV+A RSGSL+TA Sbjct: 186 QNKRLADQLM-GGHLILSEHPPHVRPQKWHFPLRNRIISGISLGTIVVQAKERSGSLITA 244 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 ALEQGREVFA+PGPI S+GP+ LI+QGA LV +I E + Sbjct: 245 LLALEQGREVFAVPGPIFLEQSKGPNMLIQQGAKLVHSATDIFEEFSYI 293 >UniRef50_C8NPM8 Rossmann-fold nucleotide-binding protein n=11 Tax=Corynebacterium RepID=C8NPM8_COREF Length = 403 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 97/386 (25%), Positives = 157/386 (40%), Gaps = 23/386 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQRFLSFPRKSI 60 W L + + + I V ++ + + + Sbjct: 7 DRLRAWAYLSRVVEGPSVHLQTLLKQGRDPEAIAHAVKHREPWIGDLLRETASRYEWDVA 66 Query: 61 ESSLCWLEQPNHHLIPADSEFYPP----------------QLLATTD---YPGALFVEG- 100 + L + LI + +P + D P AL+V G Sbjct: 67 QQDLEQILALGGRLITPEDREWPATELDHAFGFAASGMSDHVRTYQDDAVPPHALWVRGG 126 Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 +L +L + +A+VG+RA S YG + + L TI SG A G+D VAH AL+ Sbjct: 127 DLRSLTAQAVALVGTRAVSQYGREVTAMIVDNLVPHQWTIISGGALGVDTVAHTTALRAG 186 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G ++ V GL+ +P + L ++ +GGA+V+E+P PP + F RNR+++ LS+ Sbjct: 187 GTTVVVAACGLDRSYPAHNRGLFEEVVNRGGAIVTEYPPGTPPQRHRFLTRNRLVAALSQ 246 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G +V EAA RSG+L T GR A+PGP+ GS G H I+ G A +V +EI Sbjct: 247 GTVVTEAAWRSGALNTLSWCAGLGRVAMAVPGPVTTAGSLGCHERIRNGHAQMVCSGDEI 306 Query: 280 LENLQFGLHWLPD-APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEV 338 L E ++ + Q ++ + +G VA G + V Sbjct: 307 RSLLGAIGGMDAQAQYELNYAANPIQGLSRNELRVYDALGRHPREAAEVATETGLTLALV 366 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRA 364 + L++L G +A + RL Sbjct: 367 IHLLVDLNSRGLVAREGVRWARLAEQ 392 >UniRef50_Q47S58 SMF protein n=1 Tax=Thermobifida fusca YX RepID=Q47S58_THEFY Length = 394 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 163/379 (43%), Gaps = 20/379 (5%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAV-----VLQQTGLTL-----RQAQRFLSFP 56 +++ + + + L G + R+ +R+ + Sbjct: 19 RAGWSAVAEPGDPVLDALLRTY-SAAQAWEAVCAGTPLPLPGTAVSTTAYRRWERWQACA 77 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELHALHSFQLAV 112 R ++ L + L+ +P QL P AL+V G +L +++ Sbjct: 78 RDTDVDGMLTRAGELGIRLVVPGDPEWPSQLDLLAERRPYALWVRGTHDLRNACLRSVSI 137 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSRA S YG TLA G + SG A GIDG AH+ AL + ++AVL G++ Sbjct: 138 VGSRAASAYGLHVAVEMAATLAHHGWCVVSGGAYGIDGAAHRGALSGDAATVAVLACGVD 197 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +P+ H +L A ++ G +VSE+P P + F RNR+I+ L+ G +VVEA RSG Sbjct: 198 LAYPKGHEQLFAEVV-NHGVVVSEYPPGTAPTRHAFLVRNRLIAALTPGTVVVEAGQRSG 256 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLP 291 ++ TA A E GR + A+PGP+ + S G H L++ A+ VT +++E L Sbjct: 257 AMNTAAHAQELGRTLMAVPGPVTSALSAGCHRLLRDYQAVCVTGARDVMEQLSPLGAAEG 316 Query: 292 DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 D+ S D + +L + V +A +G + QL L AG Sbjct: 317 DSSGGVQVSADL--LDDTAQRVLGALPERGSAGVARIAAASGLGPDAALRQLGLLAAAGH 374 Query: 351 IAAVPGGYVRLRRACHVRR 369 + P G+ R R Sbjct: 375 VERTPTGWRRRIPGARRPR 393 >UniRef50_B5ZK58 DNA protecting protein DprA n=11 Tax=Acetobacteraceae RepID=B5ZK58_GLUDA Length = 395 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 124/383 (32%), Positives = 175/383 (45%), Gaps = 25/383 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 LRL + ++ A + + R + P + I + Sbjct: 7 LAARLRLARTEGVGPVGYRKLLLDYGDAERALAALPARARAAGRARALRI-PPAEDIAAE 65 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + +I YPP L D P AL V G+ L +A+VG+R S G Sbjct: 66 IDGTMALGGRIIMLGDPDYPPLLAGIHDAPPALSVLGDAALLAGCGIAIVGARNASSNGA 125 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R TLA++G+TI SGLARGID AH+ A++ GV+IA + GL+ +P HA L Sbjct: 126 RMAESLAATLASQGLTIISGLARGIDAAAHRGAMRA-GVTIAAVAGGLDRPYPPDHAELQ 184 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + Q G +V+E PL P + +FPRRNR+I+GL+ G +VVEAALRSGSL+TA A Sbjct: 185 GRI-AQHGVVVTETPLGTAPQSRHFPRRNRLIAGLALGCVVVEAALRSGSLITADLAAGY 243 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL-------------------- 283 GR +FA+PG + S G + L+++GAIL +++L L Sbjct: 244 GRVLFAVPGSPLDARSRGSNALLRRGAILTESEQDVLAELPAGWQGRRQPESRQPENGVA 303 Query: 284 --QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 Q P P + S A +L + TPVD + R ++T Sbjct: 304 QTQAAWPEPPAFPAPTPLSEGPGGQAEIRDAILTLLSFTPTPVDDLVRRCQFSTSAILTV 363 Query: 342 LLELELAGWIAAVPGGYVRLRRA 364 L ELELAG I +PGG V L Sbjct: 364 LSELELAGNIETLPGGSVVLPSQ 386 >UniRef50_A9BGH2 DNA protecting protein DprA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH2_PETMO Length = 330 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 161/334 (48%), Gaps = 18/334 (5%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 + + + ++ I SL ++ I E YP L Sbjct: 15 KSNKELLEYTETD--TSPTLFKEEFEENKRKIVQSLDKIKDLGI--ITYWDEEYPDLLKN 70 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 D P L+ G+ L S +++VG+R + YG+ + L++ T+ SG+A GI Sbjct: 71 INDPPVILYYFGDPSLLKSKTVSIVGTRKTTDYGKSICIEITKALSS--YTVVSGMAYGI 128 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D +A + A +IAVLGNG++ I+P+ + L + E+ G ++SE+ Y F Sbjct: 129 DSIAQRNAK----KTIAVLGNGIDIIYPKSNESLYNKIKEE-GLIISEYFPGTRATKYTF 183 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 P RNRII+ LS+ +VVEAA +SGSL+TAR AL+ GREV A+PG I S G ++LI Sbjct: 184 PYRNRIIAALSEKTIVVEAAKKSGSLITARYALDYGREVLAVPGDITRLNSYGTNYLIYS 243 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVA 328 GA + + + E EN +P++ ++ ++L + + +D + Sbjct: 244 GATPIISIQHLKELFGI----TNLEVENYDENPEEMEL---KEKILKLINEGNNNLDSLC 296 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 E + V +++ +++LE+ G ++ G Y L Sbjct: 297 ETLKEDVSAILSTIMQLEIDGKLSQENGTYFTLN 330 >UniRef50_D1ASK9 PutativeDNA recombination-mediator protein A n=5 Tax=Anaplasma RepID=D1ASK9_ANACI Length = 378 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 14/363 (3%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ-QTGLTLRQAQRFLSFPRKSIESSL 64 +R+M + + ++ + + G R P E + Sbjct: 19 ACIRIMRTAKIGPIAFQKLIKLYKTPELALDALAHGELGNVGRIC------PEDDAEKEV 72 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGE 123 + +I YP LL D P + G++ L+ ++A+VGSR S G+ Sbjct: 73 ELCRKLGARMISMFEREYPQMLLHIYDPPPVITALGDVALLNKNNKIAMVGSRNASANGK 132 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R L+ G SGLARGID H + + ++AV NG++ ++P+ + L Sbjct: 133 RIAYGIAFDLSKAGFVTVSGLARGIDSTVH-SVIFEKMPTVAVTANGIDVVYPKDNLHLY 191 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 +++ GG +V+E P P A FP+RNRIISG++ G +VVEA+ RSGSL+TA AL Q Sbjct: 192 RAIVHNGGVVVTELPFSSLPKASFFPQRNRIISGMAWGTVVVEASRRSGSLITANFALSQ 251 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF-----GLHWLPDAPENSF 298 GREVFA+PG +P G ++LIKQGA LV E+I++ L + L A Sbjct: 252 GREVFAVPGLALDPKYSGSNYLIKQGATLVESAEDIIQALNPGARTIAANSLRHAARRQD 311 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D A +L + T ++ +A ++ +L+ELEL + PG Sbjct: 312 AATDGAGSAAIRRAILQQLSVSPTDIEDLAACTKIGTSTLLAELIELELLRKVHRFPGNR 371 Query: 359 VRL 361 L Sbjct: 372 FAL 374 >UniRef50_A1VCL3 DNA protecting protein DprA n=4 Tax=Bacteria RepID=A1VCL3_DESVV Length = 668 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 149/288 (51%), Gaps = 4/288 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQ--AQRFLS-FPRKS 59 + L L L +R+ G +RQ AQ S R + Sbjct: 35 ELWAVLALRHTEGLGARSHIRLIRHFGSAYAAVQRAPHLAGSGVRQQAAQALASGRWRAT 94 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 ++ L + ++ + YP +L + D P L+ +G++ L + L VVGSR S Sbjct: 95 AKAEWDALRACDCGILLWNDPRYPERLRSLPDAPALLYCKGDVALLDNPALGVVGSRLCS 154 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 G R LA GVTI SG+ARGID AH A LQ G ++ VLG G++ +P + Sbjct: 155 RQGMRMAAQLARDLACAGVTIVSGMARGIDREAHLAGLQGVGCTVGVLGTGIDIRYPYDN 214 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + + G LV+EF P +FP RNR+ISGLS GVLVVEAA RSGSL+TAR Sbjct: 215 EDLFERMASE-GLLVTEFAPGARPEPRHFPIRNRVISGLSLGVLVVEAATRSGSLITARL 273 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 ALEQGREV+A+PGP+ S G H L+++GA V E+IL +L L Sbjct: 274 ALEQGREVYAMPGPVSAQTSRGCHDLLEEGAHAVGSAEDILVDLAPQL 321 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 272 LVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAER 330 V EE + ++ ++ P LLA + D VD + Sbjct: 577 PVISDEEGATAVSSASLRATARGVHAVNPDMPKEHGDPESRLLALLRDMGEAHVDDLCRA 636 Query: 331 AGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +V LL LE+ G + +PG Sbjct: 637 LAMAPGDVSGTLLLLEVQGVVRRLPGMRYA 666 >UniRef50_Q5FRH1 DNA processing chain A n=1 Tax=Gluconobacter oxydans RepID=Q5FRH1_GLUOX Length = 394 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 111/383 (28%), Positives = 167/383 (43%), Gaps = 24/383 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D LRL + + + R+ A + + R+ + + Sbjct: 14 TDRIDILRLARTTGVGPINFARLMTQYGSAGAALAALPGRMRRAGRREDPVI-PTVSRMS 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L LE+ ++ YP L D P LF G++ L + +VG+R S Sbjct: 73 DELERLEKLGGKMLVRGDADYPLLLSCIPDAPPVLFTLGDVRKLSMRSVGIVGARNASAA 132 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R +A G+ + SGLARGID AH AAL G+++A + GL+ ++P +A Sbjct: 133 GIRIAESLSAEIAHSGLCVVSGLARGIDSAAHAAAL-YPGLTVAAIAGGLDHVYPPANAS 191 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + E+ G LV+E L P A +FPRRNR+I+G+S G L++EA + SG+L+TA A Sbjct: 192 LQQQIAER-GCLVTEALLGTAPQARHFPRRNRLIAGISLGCLIIEATVGSGTLITADLAQ 250 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYS 300 RE+ +PG +P S G + L+K G A L ++IL+ L L +AP + Sbjct: 251 SYNRELLVVPGSPLDPRSRGGNQLLKTGQATLTENIDDILQVLPSALPPREEAPWQRSSA 310 Query: 301 PDQQ--------------------DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 + L + + + VD V R V V+ Sbjct: 311 HSPPLTGFSEPSTPWGSPTSEDWVEPDLAQKTVCSLLSVTPVAVDDVVRRCQFSVSAVLA 370 Query: 341 QLLELELAGWIAAVPGGYVRLRR 363 L ELEL G + VPGG V L Sbjct: 371 TLAELELGGVVEFVPGGRVALLP 393 >UniRef50_B7GGD0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGD0_ANOFW Length = 295 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M D E + L + + R+ + + + QQ L Q+ + Sbjct: 1 MYDTTRERLIHLHHCRGIGWKSIARLLQADPSLASVFHLSSQQLQRLLPIPQKHFTAFFH 60 Query: 59 SIE-----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQL-AV 112 + + E+ N H++ + YP L D P L+ +G + L ++ +V Sbjct: 61 DLHCHKLKRMIKTYEEQNIHIVTIKDDGYPEWLKHIYDPPWVLYAKGNVALLKRKKIISV 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G + L G + SGLA+G+D AH+ L+ +G +IAV+ GL Sbjct: 121 VGTRTPTRQGIAAMHIVLPPLVQNGWIVVSGLAKGVDAEAHRLCLRHHGETIAVIAGGLY 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L L ++SE+P V P ++FP RNRIISGLS G LVV+A RSG Sbjct: 181 YMYPPENESLFRQ-LATTQLIISEYPPFVRPQTWHFPMRNRIISGLSLGTLVVQAKERSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 SL+TA AL+QGREVFA+PG I + G + LI+QGA L+ E+I E + Sbjct: 240 SLITAHFALQQGREVFAIPGDITTKEALGTNRLIQQGAKLILSSEDIEEEFRHLF 294 >UniRef50_C7QA47 DNA protecting protein DprA n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QA47_CATAD Length = 600 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 109/383 (28%), Positives = 158/383 (41%), Gaps = 25/383 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQ---------SHIDAVVLQQTGLTLRQAQRFL 53 D L L S + R+ S D + +A Sbjct: 216 DRRARLVLHHASEPGDALLCRLVARFGAPTVATALLSGSAADLLSAHDEESAADRAALIS 275 Query: 54 SFP-------RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELH 103 R ++ L E+ + + +P L D P ++ G +L Sbjct: 276 RAHTLQTRCYRADPDADLAVSEKTGARYVIPADDAWPTALDDLGDAAPLGMWFLGTADLV 335 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 A +++VG+R + YG LA RG I SG ARGIDG AH+ AL GV+ Sbjct: 336 AASRRGVSIVGARIATGYGMHVAGELAAGLAERGWAIISGAARGIDGAAHRGALAARGVT 395 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A L G++ ++P H L ++ + G ++SE P + F RNR+I+ L G + Sbjct: 396 VAALACGIDLVYPAGHEALIGAIASE-GLVLSELPPGTAVSRFRFLDRNRVIAALGLGTV 454 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEAA RSGSLVTAR A GR V A+PGP+ + SEG H LI+ GA+LVT E++E+L Sbjct: 455 VVEAAARSGSLVTARLADSLGRPVLAVPGPVTSEASEGTHQLIRDGALLVTRAAEVVEHL 514 Query: 284 QFGLHWL--PDAPENSFYSPDQQDVALPFPELLANV---GDEVTPVDVVAERAGQPVPEV 338 L P + + + +L + G A AG V Sbjct: 515 GDLGADLAEPTTTARTSSRRPRDSLDPIAARVLDALPIAGRGTLDTVEAALAAGLEPRAV 574 Query: 339 VTQLLELELAGWIAAVPGGYVRL 361 L L AGW+ G+ Sbjct: 575 HAALGRLTTAGWVDRDERGWCAR 597 >UniRef50_C9PX54 Putative uncharacterized protein n=2 Tax=Prevotella RepID=C9PX54_9BACT Length = 375 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 164/374 (43%), Gaps = 14/374 (3%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + E + L ++ + ++ + + + + + R R Sbjct: 1 MNNNETRNAIALTRVNYFNLAGLAQLYRQLGSATAVIEHRNDLREVLPDASPRLQEAMRN 60 Query: 59 ------SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 ++ + + + + + YP +L D P LF +G + + + + Sbjct: 61 IETHLKVADAEMEYNLRNGIRALSLADDDYPQRLKNCDDAPLVLFYKGTANLNRARVINI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R + YG+ R F L + V I SGLA G+D AH+ AL ++ VL +G Sbjct: 121 VGTRHCTAYGQDLIRRFVSELKSLCPEVLIVSGLAYGVDINAHRQALANRLDTVGVLAHG 180 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ ++P RH + A +L QGG L +EF + NF RRNRI++G+S ++VE+A Sbjct: 181 LDYLYPTRHKQTADEMLTQGGLL-TEFLTNTNADKLNFVRRNRIVAGISDACVLVESAAH 239 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 G L+T A + R+VFA PGP+G P SEG + LI+ A LV+ + + L + Sbjct: 240 GGGLITTSIARDYNRDVFAFPGPVGAPYSEGCNNLIRDHKAQLVSSAADFVHALGWETDL 299 Query: 290 LPDAPENSFYSPDQ-QDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELEL 347 ++ ++ + + ++ ++ A P+ + L +LE+ Sbjct: 300 KRMQATRQGIERQLFPQLSNEEQAVVQALEKQNDQAINQLSLTANIPISRLTVLLFQLEM 359 Query: 348 AGWIAAVPGGYVRL 361 G + + GG L Sbjct: 360 KGILKLLAGGCYHL 373 >UniRef50_D1UFG2 DNA protecting protein DprA n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFG2_9BURK Length = 448 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 116/302 (38%), Positives = 164/302 (54%), Gaps = 7/302 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR----- 57 + WLRL L + + + I + +A + Sbjct: 10 ELAAWLRLSLAPGLKPAALRLLLSAFGLPAAILQQEHETLAAIAGEAAAHAALAPTGPEF 69 Query: 58 -KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 +++ + W E P + ++ D YPP LL D P L+++G L LH +A+VGSR Sbjct: 70 DAQLDAVIAWRELPGNQIVTLDDPAYPPALLTMPDPPPLLYIKGRLELLHRRAVALVGSR 129 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + + G F T++ GVT+ SGLA+GIDG AH+ L G ++AV+G G + ++P Sbjct: 130 SATPQGLEDAERFARTISAAGVTVVSGLAQGIDGAAHRGGLDGIGSTVAVIGTGADLVYP 189 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H LA + Q GA++SE+PL P A NFP+RNR+I+GL GVL+VEAA+RSGSL+T Sbjct: 190 SAHHALARQIAAQ-GAILSEWPLGTPARAANFPQRNRLIAGLVSGVLIVEAAMRSGSLIT 248 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A E GR++FALPG I P S G H +IKQGA LV P+E+LE L F AP + Sbjct: 249 ARLANEMGRDIFALPGSIHAPLSRGCHRMIKQGAKLVETPDEVLEELGFAKAAPISAPAS 308 Query: 297 SF 298 Sbjct: 309 PA 310 >UniRef50_Q7NJS1 Gll1761 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJS1_GLOVI Length = 360 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 152/347 (43%), Gaps = 15/347 (4%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M + W+ + + R+ + + R R+ Sbjct: 1 MTSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRY 60 Query: 60 IES-----SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 E L LE YPP L D P LF G L L S +AVVG Sbjct: 61 RERTDPGLLLEALEDRWPSFWTPADGDYPPLLREIPDPPPLLFYRGPLRQL-SPAVAVVG 119 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S YG RW ETLA G + SGLA GIDG+AH+AAL V G + AVL L + Sbjct: 120 TRHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAALGV-GKTAAVLATSLTRV 178 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P HA +AA + G L+SE+ + L +NFPRRNRI+ G+S +V+EA RSG+L Sbjct: 179 YPPEHAGMAAEI-AHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGAL 237 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 ++A A + RE+FALPG I P ++G LI QGA ++ E +L +L L Sbjct: 238 ISAYLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQL------V 291 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + S + + + + D +A G + + Sbjct: 292 RATVPSALPPVLDGDEKRIWDQIQGDGCSFDELALGTGLTTDRLASA 338 >UniRef50_A1HN52 DNA protecting protein DprA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN52_9FIRM Length = 282 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 107/286 (37%), Positives = 150/286 (52%), Gaps = 13/286 (4%) Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YPP L + P LF G L +A+VG+R S YG ++ LA Sbjct: 2 FTDHEYPPLLREIFNPPYVLFYRGRLPRPKELLIAIVGARRASSYGRNVAQMLGAGLAAA 61 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 G+ + SG ARGID AHK ALQ G + AVLG G++ +P +A++ A + E GG ++SE Sbjct: 62 GIGVVSGAARGIDTAAHKGALQ-KGQTYAVLGCGVDVCYPPENAKILAEIAETGG-IISE 119 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 + PP A +FP RNRII+G+ +GV+VVEA RSG+L+TA ALE+GR+VFA+PG I + Sbjct: 120 YAPGTPPHAGHFPARNRIINGMCRGVVVVEAGERSGALITADYALEEGRDVFAVPGSIFS 179 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLAN 316 GS+G H L+KQGA LVTE ++ILE ++ + + Sbjct: 180 EGSKGVHRLLKQGAKLVTEVQDILEEYDV----------RPVSHYAAPELLPDEAAVYGS 229 Query: 317 VGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + E VD + + +V LL+LEL G I Sbjct: 230 LDYEHPLSVDEIVIKTNLSASKVTYALLQLELRGLIGEDGAKRYIR 275 >UniRef50_C5AF38 DNA processing protein DprA, putative n=19 Tax=Betaproteobacteria RepID=C5AF38_BURGB Length = 445 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 132/404 (32%), Positives = 181/404 (44%), Gaps = 45/404 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-LTLRQAQRFLSFPR--- 57 WL L S S L + + L A R + PR Sbjct: 9 EALAAWLHLASASGLPAPARETLLQAFDSIEALVDADHAALASLAGEAAARAVHAPRAAA 68 Query: 58 --KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 ++ WL P H L+ YPP+ D P L+V+G+ L +A+VGS Sbjct: 69 LDAEADAVRAWLAIPGHRLVTRHDADYPPRFAMLYDPPPLLYVKGDAARLKRRAVAIVGS 128 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R + G F LA G+ + SGLARGID AH+ AL ++AV+G G++ ++ Sbjct: 129 RLATPQGRADAAWFARALAAAGLVVVSGLARGIDAAAHRGALDSAAGTVAVVGTGVDRVY 188 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P H LA ++ Q GA++SE+PL P A NFP+RNR+I+ L GVLVVEAA RSGSL+ Sbjct: 189 PAAHHLLAEAI-AQHGAVLSEWPLGTPARAANFPQRNRLIAALCDGVLVVEAAPRSGSLI 247 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A + GR+VFALPG I P + G H LI+ GA LV P +ILE + L Sbjct: 248 TARVANDIGRDVFALPGSIHAPLARGCHALIRDGAKLVETPSDILEEFGITVQELARPAA 307 Query: 296 NSFYS--------------------------------------PDQQDVALPFPELLANV 317 + S + + LL + Sbjct: 308 AAADSGTRFRAAGKRPRREKTGSNNNEAAQSPGRDGTGAAPDCAGVESLPPEALALLDAL 367 Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 G P D++A RAG + LL LELAG +A++PG + Sbjct: 368 GHGPVPADLLASRAGLAADTLPHLLLRLELAGRVASLPGDRYQR 411 >UniRef50_C1D688 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=7 Tax=Betaproteobacteria RepID=C1D688_LARHH Length = 383 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 132/353 (37%), Positives = 181/353 (51%), Gaps = 11/353 (3%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFP-RKSIESSLCWLEQ 69 I L + R+ + + R A+ + R+ E+ WL + Sbjct: 36 IPGLGAVRLNRLLQAFGSAEAVLEAGTAGLTGIVPARLAEAIVQTDTRREQEAVAAWLAR 95 Query: 70 PNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 L+ YPP L TD P L++ G L LAVVGSR + G R Sbjct: 96 GEGRDLLTLADADYPPALAELTDPPPLLYLHGRRELLQQPMLAVVGSRQATPQGRRDATR 155 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 F LA G+T+ SGLA GID AH+ AL G ++ V+G G++ I+P + LA + Sbjct: 156 FARALAGSGLTVVSGLAAGIDAAAHEGALAAGGGTVGVIGTGIDRIYPAANRDLAYRMAA 215 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 + G LVSE PL PPLA +FPRRNR+I+GLS G LVVEA L SGSL+TAR ALE GREVF Sbjct: 216 E-GLLVSELPLGSPPLAAHFPRRNRVIAGLSLGCLVVEADLESGSLITARLALEAGREVF 274 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG I +P ++G H LI++GA L E+IL L L + + +D Sbjct: 275 AMPGSIHSPVAKGCHALIREGAKLTECLEDILSELPPVLSPPVEETRSQAVPQAIED--- 331 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +LA +G E+ +D + ER G V ++ LL ELAG + +PGG + Sbjct: 332 ---AVLAALGAEILTLDSLVERTGLTVDTLLGMLLAHELAGQVVGLPGGRYQR 381 >UniRef50_Q8REN1 Smf protein n=10 Tax=Fusobacterium RepID=Q8REN1_FUSNN Length = 288 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 155/292 (53%), Gaps = 14/292 (4%) Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLF 129 N++ I + + YP L ++ P L+ +G L L ++VVG+R S YG+ Sbjct: 6 NYNFITINDDIYPECLKEISNPPLKLYYKGNLDLLKEERLISVVGTRNPSSYGKLCCEYM 65 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 + + +TI SG A+GID +AHK +L G +IAV+ +GL+ ++P + L + E+ Sbjct: 66 VKKMTGANITIVSGFAKGIDSIAHKTSLLTEGKTIAVIASGLDIVYPASNLSLYREI-EE 124 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G ++SE+ V P NFP+RNRII+GLSKG +VVE+ R GSL+TA ALE R+V+A Sbjct: 125 KGLILSEYEAGVKPFKSNFPQRNRIIAGLSKGTIVVESKDRGGSLITADLALEFNRDVYA 184 Query: 250 LPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 +PG + + S+G + LI+ A ++ E+L++ + + D Sbjct: 185 VPGDVFSEYSKGCNNLIRDSRAKSLSNINELLKDYSWEIEEKN----------DSNKYTK 234 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L ++ E +D + E++ +L+ LE+ G I ++ GG + Sbjct: 235 NQMLILNSLSSE-KNLDNILIETKIEQTEILAELMTLEIMGVIKSIAGGRYK 285 >UniRef50_C1TKL7 DNA protecting protein DprA n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKL7_9BACT Length = 358 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 14/366 (3%) Query: 1 MVDTE-IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLSFP- 56 M +E L L + G + + + G + +R Sbjct: 1 MTRSERALLALNFSVNAPGQWARELDLLGETAESLVSNRKLALSLGFKEDRWERMAGLYG 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 E + + + +P L + D P L+V+G +++VG+R Sbjct: 61 SDWPEEEMERASRFGAQVFFRGDPLFPDGLDHSDDPPVVLYVKGSWPI-PGPCVSIVGTR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S YG + R E LA GV + SG A GIDG AH AL+ G ++AVLG G++ ++P Sbjct: 120 RCSPYGSQVARALAERLALAGVLVVSGGAMGIDGSAHSGALEGQGATVAVLGTGVDVVYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R H +L +S+ E+ GAL+S FP+ + ++FP+RN II+ L+ ++VVE+ ++ GS++T Sbjct: 180 RGHEQLFSSISEKRGALMSRFPMGIRGNRWHFPKRNGIIAALADHLVVVESPIKGGSMIT 239 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 A A E GR V+A+PGPI S+G + L+ GA + + +E + + + Sbjct: 240 AGLAGEMGRPVWAVPGPIVQKVSQGSNKLLFDGAQPLWDLDEFVSFV--AGRDSQLSLFP 297 Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV-P 355 P + D +A++ G VPEV+ L +LE I P Sbjct: 298 PGEPPKPSPLLEEIA------TSGGITADGLADKLGISVPEVLATLADLEADEKIYRSGP 351 Query: 356 GGYVRL 361 G + L Sbjct: 352 GRWCAL 357 >UniRef50_A3TRF8 SMF protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TRF8_9MICO Length = 390 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 152/367 (41%), Gaps = 9/367 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + + I + + ++ R QR + Sbjct: 30 ERWARMAWSRIVEPETVSVRDWIAEHGAVESMQRLLAGSLVRDGRYDQRIAALDLDQARR 89 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWY 121 +L L+ ++ + +P L P ++ G + +A+VGSRA + Y Sbjct: 90 ALDRLQ---VRVVIPGDDEWPLGLDELKVPPLCIYARGLCELSITDGSVAIVGSRAATHY 146 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G E LA RGVT+ SG A GID AH+ AL G +IAVL GL+ +P+ H Sbjct: 147 GLNVAADLGEGLAQRGVTVVSGAAFGIDAAAHRGALAGGGPTIAVLARGLDRAYPQAHEG 206 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + + G +VSE PL P F RNR+I+ +S G +VVEA LRSGSL TA+ A Sbjct: 207 LLREIAD-IGVVVSELPLGWAPYRARFIARNRLIAAMSVGTVVVEAGLRSGSLNTAKYAR 265 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYS 300 R V A+PGP+ + S G H L+++ A LVT+ E+L+ + Sbjct: 266 SLVRHVAAVPGPVTSVQSAGCHKLLRETEATLVTDAAEVLDVMGRLSLDAVGL--ARAPV 323 Query: 301 PDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + ++ + + V + + +++ L L + G + V + Sbjct: 324 TPESELDPVALGVWSAVPVRNPADLAELQRLTALDPTTLLSALGRLTMLGLVVRVGERWR 383 Query: 360 RLRRACH 366 ++ A Sbjct: 384 KVPAARR 390 >UniRef50_C5VGE8 DNA processing chain A n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VGE8_9BACT Length = 353 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 12/352 (3%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTGLTLR----QAQRFLSFP--RKSIESSLCWLEQPNHHL 74 M + + + + Q R+ E L + N Sbjct: 1 MAELYKRAGSATAVIEHKRDIREILPEASTHLIQALKDIDSLREWAEQELEYDRLHNIEP 60 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I + E YP +L D P L+ G + + ++G+R + YG+ R F L Sbjct: 61 ICMNDERYPQRLKECPDAPILLYYLGNADLNNRHVINIIGTRHCTTYGQDIIRSFVRELK 120 Query: 135 TR--GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 V I SGLA G+D AH+AAL+ ++ VL +GL+ I+PR H A +++QGG Sbjct: 121 VLCPDVLILSGLAYGVDIHAHRAALENGFETVGVLAHGLDDIYPRGHRDTALKMIKQGGL 180 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 L SE+ P+A NF +RNRI++G + ++VE+A + G L+T A GREVFA PG Sbjct: 181 L-SEYTTHTQPVARNFVQRNRIVAGCADATILVESAAKGGGLITCSIARSYGREVFAFPG 239 Query: 253 PIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLH-WLPDAPENSFYSPDQQDVALPF 310 + + SEG + LI+ GA L+T + ++ + + L A + D++ Sbjct: 240 AVHSDYSEGCNNLIRDNGAALITSATDFVKAMGWDDAIKLGQAQQRGIERTLFPDLSSEE 299 Query: 311 PELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 ++ + + +++++ +A P+ + L LE+ G I A+ GG L Sbjct: 300 EAIVRVLAKNNDLQINLLSIQANIPISRLTGILFTLEMKGVIRAMAGGCYHL 351 >UniRef50_C7GYG5 DNA protecting protein DprA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYG5_9FIRM Length = 286 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 10/293 (3%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 N ++ Y L P L+ G+ +S +AVVG+R + YG+ Sbjct: 2 MANIKIVKNTDSEYSKLLEKIKRPPELLYCLGDTALFNSPCIAVVGTRKPTEYGKWCTYN 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 ++L RG TI SG+A GID +AH+ AL++ G +IAV+G G++ +P R+ L + E Sbjct: 62 IVKSLVMRGHTIVSGMASGIDEMAHRTALELGGKTIAVMGTGIDGCYPARNKALKRRI-E 120 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 Q G ++SE V P Y+FP RNRII+GLS+ +VV+A + SGSL+TA+ A+E+GR+V+ Sbjct: 121 QDGLVISEDGEKVKPRRYSFPIRNRIIAGLSEATVVVQAGVYSGSLITAQLAMEEGRQVY 180 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG I S G + LI GAI++T P+++ +L ++ D + ++ Sbjct: 181 AVPGDIDKVMSIGCNKLIADGAIIITVPDDV--------AFLEKTNGDNEVVIDLESLSE 232 Query: 309 PFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ V E + +A V +V++ + E+E+ G I G Sbjct: 233 VERKIYELVKREGEMSFEKIARLTKTGVSKVMSVITEMEIKGLITTSLGRVFI 285 >UniRef50_B2IEN8 DNA protecting protein DprA n=3 Tax=Rhizobiales RepID=B2IEN8_BEII9 Length = 429 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 118/414 (28%), Positives = 166/414 (40%), Gaps = 61/414 (14%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + WLRL + + + S A V R +E Sbjct: 18 ERFDWLRLSRSEMIGPRTFLSLLDRYRSASSALAAVPDLARRKGR---PIKLADTSDVER 74 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L I YPP L P + V G +L ++A+VG+R S G Sbjct: 75 ECEALAAAGGSFIALCEPDYPPLLRLIDAPPPIIAVRGRRESLARAKVAIVGARNASAAG 134 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + +A G I SGLARGID AH+AAL+ +IAVL GL I+P HA L Sbjct: 135 LVFTERLSREIAKAGYVIVSGLARGIDAKAHQAALETG--TIAVLAGGLGRIYPAEHAPL 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 LL GA +SE P +FPRRNRI+SGLS G++VVEAA +SGSL+TAR A + Sbjct: 193 LERLL-GEGAAISEMPFHWEARGRDFPRRNRIVSGLSLGLVVVEAARQSGSLITARFAAD 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL------------------- 283 QGR++FA+PG +P +EGP+ L+++GA T+P+++++ L Sbjct: 252 QGRQIFAVPGSPLDPRAEGPNDLLQEGATFCTKPDDVIDALANQRNHVARPGFAEASAPS 311 Query: 284 -----------------QFGLHWLPDAPENSFYSPDQQDVALPFPELL------------ 314 + + + +L Sbjct: 312 DGADLLWDEIDFLETDASVFRKSIKAEWDEETVPTPAAALFSDESAVLIASDGQDHPDQA 371 Query: 315 -------ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 A +G VD +A A P E+ LL LEL G + V L Sbjct: 372 SLKERIIALLGPAPVSVDELARAAASPPGELQAVLLILELEGRLTRHGASLVSL 425 >UniRef50_C0QYG1 Putative DNA protecting protein DprA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYG1_BRAHW Length = 416 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 61/412 (14%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLSFPRKSIES--- 62 + L I + + + + +I + L + + +F + I Sbjct: 2 IALNQIDKVGDKRISELINHYESVENIFDDKEENIRELLEKKFKSQIGNFDKNEILDKAN 61 Query: 63 -SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + ++ E YP L + P L+ +G+L L +A+VG+R + Sbjct: 62 TIVEKSKNYGIGILSLFDEDYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPTNE 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 ++ L++ +++ SG+A+G+D AH A+ + ++AVLGNG++ ++P + + Sbjct: 122 SRKYSFELASKLSSLNISVVSGMAKGVDREAHLGAISSHINTVAVLGNGIDNVYPSENLQ 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + L E+ G +VSEF + P NFPRRNRIISGLS V++VEAA +SG+L+T AL Sbjct: 182 IYNKLSEK-GLIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDYAL 240 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW--------LPDA 293 QGR+V+ P G H L K GA + +ILE+ L Sbjct: 241 NQGRDVYIAPYDEKKSCYFGNHKLYKDGAKIAYNYMDILEDFDSIFSNDDDYVKMKLKYF 300 Query: 294 PENSFYSPDQQDVA----------------------------------LPFPELLANV-G 318 S ++ + +++ + Sbjct: 301 EGGDIKSKSLKNDSIKSENNNSNNKDKKETKKEEVKDKKEKKKNKISKQNDESIISALQE 360 Query: 319 DEVTPVDVVAERAGQPVPEV-----------VTQLLELELAGWIAAVPGGYV 359 DE +++ + + EV + L++LE+ G I + G Y Sbjct: 361 DEALLYNIIKQNDKIHIDEVIEESKMKVQAVTSMLMQLEIKGIIKQLSGKYY 412 >UniRef50_D2AUI4 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Streptosporangineae RepID=D2AUI4_STRRD Length = 396 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 118/396 (29%), Positives = 171/396 (43%), Gaps = 35/396 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---------------DAVVLQQTGLT 45 M D + LM ++ M R+ Q+ + A ++ Sbjct: 1 MSDRLARVTLMRVAEPGDAMMGRLVAAHGPQAAVARIREGRPEPELARWFADSPRRESAG 60 Query: 46 LRQ-----------AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-P 93 R A L E+ L+ +P QL + P Sbjct: 61 SRDERLTARLGRMFASWAARLETADPVRDLDEGERRGARLVVPGDSEWPTQLDDLGESRP 120 Query: 94 GALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 AL++ G +L +AVVGSRA + YG F L RG + SG A GIDG Sbjct: 121 HALWLHGEADLRFSCLRSVAVVGSRAATPYGTHVAAEFGAGLGERGWVVISGGAYGIDGA 180 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 H+ AL ++AVL G + +P H L A++ Q G LVSE P+ P F R Sbjct: 181 VHRGALAGETPTVAVLACGADVAYPSAHHSLFAAVRSQ-GVLVSECPMGATPTRPRFLIR 239 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-A 270 NR+I+ LS+G +V+EAA+RSG+L TA A+ R + A+PGP+ + S G H LI+QG A Sbjct: 240 NRLIAALSRGTVVIEAAVRSGALNTAGHAVSLNRHLAAVPGPVTSETSAGCHRLIRQGRA 299 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAE 329 I VT PEE++E + L PE + ++ +L V T +A Sbjct: 300 ICVTTPEEMIELVGAMGGDLA--PEPRGPVLPRDRLSPEIRRVLEAVPARTGTGPATIAV 357 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 AG + V++ L L AG++ P G+ RLR Sbjct: 358 AAGVDLDTVLSCLGALAAAGYVERAPRGW-RLRPDG 392 >UniRef50_A3VTV0 DNA processing protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTV0_9PROT Length = 371 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 109/361 (30%), Positives = 164/361 (45%), Gaps = 6/361 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 +T LRL L R+ + + +G R+ + + Sbjct: 8 DETLAALRLARTVGLGPLTFRRLIDRFGSAIAVIRGL--DSGEIPRKGRSLALPSAAAAR 65 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + L+ YP L A D P L + G L +A+VG+R S Sbjct: 66 AEWADAHGYGATLLSLTDPSYPTALRAIEDPPPVLTLLGRGDLLTRPAVAIVGARNASSA 125 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R L G + SGLARGIDG AHK AL+ +IAV+ G+++I+P HA Sbjct: 126 GLRLAETLAADLGEAGCVVVSGLARGIDGAAHKGALKTG--TIAVIAGGIDSIYPPDHAD 183 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ +Q G +++E + +FPRRNRI++GLS+ ++VVEAA RSG+L+TAR Sbjct: 184 LYRAIGKQ-GLILAEDAIGRRAKGQDFPRRNRIVAGLSRVIVVVEAAERSGTLITARMGN 242 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 EQGRE+ A+PG +P S G + L++ GA L+ E++LE L+ P + Sbjct: 243 EQGREIGAVPGSPLDPRSAGTNRLLRSGATLIRHAEDVLELLEQEHRAQPITLQELPSPY 302 Query: 302 DQQDVALP-FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + + T DV+ G + LL+L L G I V GG Sbjct: 303 EAPQITEDLKERVRNLLSVTPTSRDVLLRETGLAPGTLADCLLDLLLDGHIEEVGGGAYA 362 Query: 361 L 361 L Sbjct: 363 L 363 >UniRef50_A0Z300 SMF protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z300_9GAMM Length = 380 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 111/367 (30%), Positives = 171/367 (46%), Gaps = 10/367 (2%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES 62 ++W ++ L ++ + G LR + R + + Sbjct: 13 QLWFEFLATKMLDRASKRKLLAQGFTPPQLLEPHGTWPFDGAELRASLRVSKSRQVARLK 72 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + + + YPP L +D P ALFV G+++ L +A+VG+R S G Sbjct: 73 PLLACHLLHWGRQSSGCDVYPPLLSGLSDAPLALFVSGDINCLSRPAIAIVGTRRPSRDG 132 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + LA G + SGLARGID AH+ AL+ G ++AV+ G++ I+P H RL Sbjct: 133 LKLADQMGYQLAAAGFLVVSGLARGIDAAAHRGALRSGGQTLAVMATGMDRIYPSEHYRL 192 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 A + Q GAL+SEF V P +FPRRNR +SGL +V+EA SGSL+TA A+E Sbjct: 193 AEEVAAQ-GALLSEFCPGVVPHRGHFPRRNRTLSGLCLATVVIEAGHPSGSLITANAAVE 251 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH-------WLPDAPE 295 QGREVFA P + + G G L+ QGA L+ P ++E+L L D Sbjct: 252 QGREVFAAPWSLFHRGGAGCLRLLSQGAQLIDTPAAVIEHLAVHLSGWAELTADALDYSS 311 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 N+ + + +LL +GD + +A +++ + +LEL G++ Sbjct: 312 NAGETVSLAPLEPAKRQLLTLLGDGEHDLASLASALQCSSRQLLAMVTQLELQGYVEQTS 371 Query: 356 GGYVRLR 362 G +R Sbjct: 372 AGLRAVR 378 >UniRef50_C2BVG1 DNA-binding/uptake protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVG1_9ACTO Length = 462 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 176/416 (42%), Gaps = 51/416 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL--------------- 46 D + +I+ + ++ + ++ V L Sbjct: 49 EDRQARAAWTAIAQPGEPVVGQVIEHFGVREALERVKFLAAKLPEIDDMMIRTVFQPVQL 108 Query: 47 ----RQAQRFLSFPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEG 100 Q + + R+ ++E L + L+ +P + + P AL+V G Sbjct: 109 PASVAQIEGWALRLRELNLEMEYQLLSRDGGALVVPGDAAWPGIVDSLGAVAPLALWVRG 168 Query: 101 ELHALHSFQ----LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 AL + +A+VG+R + YG + L+ RG+ + SG A GID AH+ A Sbjct: 169 NPQALQALASEGAVALVGARCATHYGTDIAQEIAYELSERGIWVISGGAYGIDAAAHRGA 228 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L +G +I+V GL ++P +ARL + + +Q GA+VSE P P + F RNRIIS Sbjct: 229 LASSGKTISVQAGGLGNLYPAMNARLFSQI-QQTGAIVSEAPPSQRPAKHLFLTRNRIIS 287 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 LS+ V+VVEA RSG++ TA EQGR+V A+PGP+ + S G H LI++GA LVT Sbjct: 288 ALSQVVVVVEAGERSGAMSTANHGAEQGRQVAAVPGPVSSTASVGCHRLIREGAALVTNA 347 Query: 277 EEILENLQFG-----------------------LHWLPDAPENSFYSPDQQDVALPFPEL 313 EI+E + + D+ ++ ++ Sbjct: 348 AEIMELMFPLNVAGQSLFGVGGSAGKSISGVVSVSPQRDSTGQIPAPSLFAGLSSDGVKV 407 Query: 314 LANVGDEVT-PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVR 368 + + ++ V+ AG V ++L +EL G + G RLR R Sbjct: 408 IDVLSKTAWKSLEQVSRAAGLGTRTVQSELGLMELDGKVETR-KGRYRLRSKATAR 462 >UniRef50_UPI0001C42420 DNA protecting protein DprA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42420 Length = 290 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 144/289 (49%), Gaps = 13/289 (4%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHW-------VAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 E + L S L + + + S ++ L +A + +++ Sbjct: 5 RERLIVLHSSMFLSWKQIAALINHDPELLTPFTSSSAFF---IKHLHLKRDKAVKLVTYL 61 Query: 57 RKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVG 114 ++ L + YP QL D P L+ +G++ L +LAVVG Sbjct: 62 KEVNSREYVSKLATSQITTLTRFDADYPEQLKELYDPPWVLYCKGDIDLLLIKIKLAVVG 121 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR + G + L V I SGLA GID AH+ + NG +IAVLG+G + Sbjct: 122 SRTPTNRGLGAVANLVKPLVKENVCIVSGLALGIDTAAHQQTISQNGHTIAVLGSGFHHF 181 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + L + ++SE+P PP + FP RNRIISGLSKGVLV+EA RSGSL Sbjct: 182 YPKENKNLFTYMAAHQ-LVISEYPPHQPPAKWTFPARNRIISGLSKGVLVIEAKERSGSL 240 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +TA AL+Q R+VFA+PGPI + S+G + LIK+GA LV E +IL Sbjct: 241 ITADQALDQNRDVFAVPGPIDSELSKGTNQLIKEGAKLVVEMSDILNEW 289 >UniRef50_C9M986 DNA protecting protein DprA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M986_9BACT Length = 366 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 26/366 (7%) Query: 2 VDTEIWL---RLMS--ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 +T +WL L + + D + + W++ + + T +QA R Sbjct: 12 KETLVWLGSGTLSARALEGCPDVDGLELLDWLSARRAV----------TPQQASRLRDLW 61 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R+ L + ++ YP +L + P L+ G + +AVVG+ Sbjct: 62 RQGWPARQLEDCTESGVTVVTCRDSQYPERLWDCAEPPMVLYCRG---PVVQSGVAVVGT 118 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + L+ GVT+ SG A G+DG +H AL + AVLG G++ + Sbjct: 119 RRCSAYGAHVAQWVGRGLSEAGVTVVSGGAAGVDGASHSGALDGGTPTAAVLGTGVDVVW 178 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR H L + ++ GG+L+SE+PL ++FPRRNRI++ L+ V+VVE+ +R G+++ Sbjct: 179 PRGHEELFSRIIGSGGSLISEYPLGAAGKPWHFPRRNRIVAALATSVVVVESPIRGGAMI 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 TAR A+E GR+++A+PG I G + L+ GA + + + L+++ Sbjct: 239 TARLAMEMGRDLWAVPGRIDEDTCAGSNRLLYDGATPLVDRQSFLQSVTGLGQL------ 292 Query: 296 NSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 N F + + ++ +L V D ++ +G P +V L L++ G I Sbjct: 293 NLFDADGESGLSDVQRSVLEAVRSSGDKSADQISIDSGVPPYQVPGVLSALQVKGLIYPS 352 Query: 355 PGGYVR 360 G R Sbjct: 353 GVGRWR 358 >UniRef50_A6GKZ0 SMF protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKZ0_9BURK Length = 362 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 162/320 (50%), Gaps = 19/320 (5%) Query: 66 WLEQPNHHL-IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 WL Q N + YP LLA D P LF EG L + +A+VGSR + G Sbjct: 50 WLLQSNKRFWVSILGPGYPQSLLALKDPPLILFGEGRQDLLKTRGIAIVGSRNATRTGLS 109 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + F + A + SGLA GIDG AH ALQ G +IAVLG G + I+P HA L A Sbjct: 110 NAQGFGKAFAQAQWVVVSGLAEGIDGAAHAGALQALGATIAVLGCGPDEIYPPHHAGLKA 169 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 ++ QGG ++SE+P P A FPRRNRII+GL+ +LVVEAA+RSGSL+TAR A E G Sbjct: 170 QIVGQGGLVLSEYPPGTAPQAGFFPRRNRIIAGLADALLVVEAAMRSGSLITARVASELG 229 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP-----------DA 293 R V A+PG I + S+G H +IK+GA+LV +E++E + L Sbjct: 230 RPVGAIPGSIHSSQSKGCHDMIKKGALLVETAQELMEEAKASLPAYKLASVLQEDDSDCH 289 Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 E + + +L +G + D +A + G + + L ELEL G + + Sbjct: 290 TEMTCTIDTDAEPDEELGRVLQYLGHDPVHTDTLARQLGLGTEDTLAALTELELLGLVLS 349 Query: 354 VPGGYVRLRRACHVRRTNVF 373 G VR VF Sbjct: 350 ESGNRW-------VRSNGVF 362 >UniRef50_Q1AW70 DNA processing protein DprA, putative n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW70_RUBXD Length = 368 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 182/368 (49%), Gaps = 15/368 (4%) Query: 2 VDTEIWLRLMSI-SSLYGDDMVRIAHWVAKQSHIDAVVL-----QQTGLTLRQAQRFLSF 55 +L L + + + R+ + + ++ GL + A Sbjct: 6 EARAAYLLLSFLQARAGRSLVRRL---GGDPAGAWVSLPAGELEREYGLGAKDASELARL 62 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +E L L ++ YP L D P ALFV+G L +AVVG Sbjct: 63 RETLDVEGVLRELAGRGISVLTPADAAYPHALREIPDPPPALFVDGALPV--GEAVAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G R LA RGV + SGLA G+D AH+ AL G ++ VLG G++ + Sbjct: 121 SRKPSPGGLEVARRLGRALAGRGVCVISGLALGVDAAAHEGALLAGGPTVGVLGCGIDVV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR +ARL + GG +VSE+ L PPLA+ FP RNRII+GL++ V+VVEAA RSG+L Sbjct: 181 YPRVNARLFGEVRAAGG-IVSEYYLGEPPLAWRFPARNRIIAGLARVVVVVEAAERSGAL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR ALE GR+V+A+PGP+G G G + L+ GA ++ + E +E + A Sbjct: 240 ITARHALESGRDVWAVPGPVGFAGCRGSNRLLADGAGVLWDIGEFVEAV--APGREGAAE 297 Query: 295 ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 E +P + +L +G E P D VA+R G + +V++ L LEL G++ Sbjct: 298 EAGGGAPPPPGLPAGEAAVLGALGFEPAPADEVAQRCGLAMGQVLSALSMLELKGYVVRD 357 Query: 355 PGGYVRLR 362 GG R Sbjct: 358 AGGGFVRR 365 >UniRef50_A0AI77 Complete genome n=3 Tax=Listeria RepID=A0AI77_LISW6 Length = 286 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 12/293 (4%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + + WL++ S S+ I V+ + + Q + F S ++ Sbjct: 1 MNFKERDTWLKIASCKSISAKKRAVIWQKVSTFGCFEMSIEQIVNIF------FSSDKKE 54 Query: 59 SIESSLCWLE---QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 I L + + +I + YP L + P LF +G L +A+VG+ Sbjct: 55 QINMELEEADVYTTEDAEIICILDDNYPDLLKEIYEAPPLLFCKGNTALLKKQAMAMVGT 114 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + + LA +TI SGLA GID AHKA+L+ G +IAVLG+G++ I+ Sbjct: 115 RRMSEYGRKACAMIAGELAELKLTIVSGLALGIDAEAHKASLRKRGDTIAVLGSGVSNIY 174 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 PR + LA ++E G L+SE+ + ++FP RNRIISGL+ G +++EAA RSGSL+ Sbjct: 175 PRSNEFLANEIIEH-GLLISEYLPNQEARRWHFPERNRIISGLALGTVIIEAAERSGSLI 233 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 TA ALEQ R+VFA+PG I S G + LI++GA LVT I+E Sbjct: 234 TADYALEQNRQVFAVPGNIFTDTSRGTNHLIQEGAKLVTNANNIIEEFFQIKP 286 >UniRef50_Q28MI7 DNA processing protein DprA putative n=8 Tax=Alphaproteobacteria RepID=Q28MI7_JANSC Length = 402 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 167/349 (47%), Gaps = 9/349 (2%) Query: 16 LYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLI 75 + +R+ + + + Q P + + L + +I Sbjct: 57 VGPATYLRLLAEHGTAAAALDALPEVAAAAGVQKYEVC--PEPVVLAELRAAARVGARMI 114 Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L TD P L+ G + +A+VG+R S G R R TL Sbjct: 115 CLGDADYPETLAQITDAPPVLWAIGRTSLMARPCVALVGTRNASSLGARMTRKLAATLGE 174 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G T+ SGLARGID +AHK++L+ +IAV+ G++ ++P +A LAA + E G +S Sbjct: 175 AGFTVVSGLARGIDAIAHKSSLETG--TIAVVAGGVDVVYPTENAELAAQISET-GLCLS 231 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E PL + P A +FPRRNRI+SGL++GV+VVEAA RSGSL+TARCA +QGREV A+PG Sbjct: 232 EQPLGLQPQARHFPRRNRIVSGLAQGVIVVEAAARSGSLITARCAADQGREVMAVPGHPL 291 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQFGLH----WLPDAPENSFYSPDQQDVALPFP 311 + + G + L++ GA LV ++++E L E +P Sbjct: 292 DSRASGANILLRDGATLVRGVDDVIEALGRPAQSGDAPSAVVHELQRPTPAAAKDGGLEG 351 Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LA++G D + E+ L LE++G + GG V Sbjct: 352 RILAHLGPTPVAEDQMIRDLNATPREMAQALAVLEMSGRVTRSAGGMVS 400 >UniRef50_A5VD04 DNA protecting protein DprA n=40 Tax=Bacteria RepID=A5VD04_SPHWW Length = 592 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 151/341 (44%), Gaps = 6/341 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + LRL+ + ++ A + P + E Sbjct: 234 NERLARLRLIRTPRIGPVAYSQLIRRFGSGVEALAALPALARRGGGALPAI--PPSAAAE 291 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + + + + YP L P L V G++ L +A+VG+R S Sbjct: 292 AEADRVARLGARHLFRGEAGYPALLDRIDTAPPVLIVRGDIALLDRRIVAIVGARNASGA 351 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R+ R L G + SGLARGID AH ++ + AV+ G++ ++P +A Sbjct: 352 AVRFARTLAHGLGEAGWLVVSGLARGIDTAAHAGSIATG--TAAVIAGGIDIVYPPENAA 409 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++ E+ G L++E P V P A +FP RNRII+GL+ G +VVEAA +SGSL+TAR A Sbjct: 410 LQEAIAER-GLLIAEQPPGVEPRARHFPYRNRIIAGLAAGTVVVEAAPKSGSLITARLAA 468 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 E GREV A+PG +P ++G + LI++GA L+ +I E L +N +P Sbjct: 469 EFGREVMAVPGSPLDPRAQGCNLLIREGATLIQSAADIAEALSPIAGVAARPADNFASAP 528 Query: 302 DQQDVALPFPELL-ANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + P L +G VD + ++G V Sbjct: 529 APAEADEPARAALTGLLGPVPLAVDELIRQSGVSAAMVQMV 569 >UniRef50_Q5WFP6 Smf family DNA processing protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP6_BACSK Length = 303 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 6/276 (2%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQR-FLSFPRKSIESSLCWLEQPNHH 73 ++ W + G+ + A + + + E+ L + Sbjct: 22 RAFSKLLCWDPSLQAPYHASPLEIAAKLGINEKSATAFWRHLHKTTPENMYANLVETGIQ 81 Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 ++P YPP L D P L+ +G + L + ++A+ G+R + YG + + Sbjct: 82 VLPLFHPLYPPLLKTIYDPPYLLYAKGNIKRLQTKKIAICGTRTPTAYGRAALATIAKPI 141 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 + +TI SG+ARGIDG+AH+ A++ G +IAVLG+G + I+P H+ L +L E L Sbjct: 142 SEHSLTIVSGMARGIDGLAHEQAIRTGGATIAVLGSGFDNIYPPEHSTLFHALAEHQ-LL 200 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V P ++FP RNRIISGLS+ V+++EA +SGSL+TA ALEQGR+VFA+PGP Sbjct: 201 LSEYPPFVKPQRWHFPVRNRIISGLSQAVIIIEAKRKSGSLITADLALEQGRDVFAVPGP 260 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 + + SEG +WLI QGA + E + E + L Sbjct: 261 VTSAQSEGTNWLISQGAGCLYTSEALFEAMPQLLSK 296 >UniRef50_C1SMY0 DNA protecting protein DprA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY0_9BACT Length = 379 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 174/358 (48%), Gaps = 10/358 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV---LQQTGLTLRQAQRF--LSFPRKSIES 62 L+L + + M +I + + L+ G+ ++ + ++ +S Sbjct: 10 LKLRCVRGVEETVMEKIYAGAGTLTGALKLDMGALRTYGIKKEISENIVTSNIDKQLFKS 69 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L LE+ ++ D E YP L T P LF G+ + +AVVGSR S Sbjct: 70 ELKALEECRADILCIDDEDYPEMLRQTVGAPCLLFARGDTASFKRPAIAVVGSRNASRAA 129 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + R L G I SG A+GID AH A++ GV+ AV+G G+N P+ + + Sbjct: 130 CDFSRRLACDLGEAGFNIVSGFAKGIDIHAHLGAVE-RGVTTAVMGCGVNHFFPQDNLKH 188 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 +L + G +V+EF + P NFPRRNRIISGLS GV+VVEA+ RSGSL+TAR A E Sbjct: 189 LNKVLAK-GCVVTEFLSNCHPAQRNFPRRNRIISGLSFGVIVVEASDRSGSLITARLAGE 247 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 QGR+VFA+P N + + L+K GAIL +++E L++ + L + + Sbjct: 248 QGRDVFAVPAFPDNRNTA-TNALLKAGAILTESYFDVIEELKYQIGNLKEVDKQETSV-- 304 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + +L + D ++ +G + VV L ++EL G++ G R Sbjct: 305 LEFGSPEQAKLFDLLMRGTLNPDELSAMSGFDIESVVINLAQMELEGYVFREIDGKYR 362 >UniRef50_D1BMP3 DNA protecting protein DprA n=3 Tax=Veillonella RepID=D1BMP3_VEIPT Length = 408 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 9/312 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL------RQAQRFLSF 55 D L S+ ++ + R V + L + S Sbjct: 5 DDNIYIAGLQSLYNVGATYVRRFIEDFGSPYDAWQAVKKVENLKPYTHISTADKRAIASS 64 Query: 56 PR-KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF--QLAV 112 + + ++ + +++ + + +P L + P LF+ G L ++A+ Sbjct: 65 AKDEKLDYIIHKIDEYKMDVTTFLDKDFPSILNHIYNPPAILFMRGNRVLLDKRLNRIAL 124 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S YG R+ + L I SG ARGID H+ L G I V+G GL+ Sbjct: 125 VGARRCSLYGRNVARMLGKELGKYSTIIVSGGARGIDTHGHEGLLASQGYGIIVMGCGLD 184 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR +A+L +L+ G L+SE+P PP A +FP RNRIISGL +GV+VVEA SG Sbjct: 185 ITYPRENAKLFDRMLQNNGLLLSEYPPGTPPSAKHFPARNRIISGLCRGVIVVEAKSSSG 244 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SL+TA A+ +GR+VF +P + + ++G +L++ GA ++T E+I+E L Sbjct: 245 SLITADMAVSEGRDVFVVPCNLLDHTADGNKFLMRNGAYVLTGYEDIVEQYHLTLREYFS 304 Query: 293 APENSFYSPDQQ 304 + + + +++ Sbjct: 305 SEQKLLPTKNKE 316 >UniRef50_C5CFD3 DNA protecting protein DprA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFD3_KOSOT Length = 343 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 176/362 (48%), Gaps = 24/362 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E + L L DD+ + + ++ L R+ ++ +S R + Sbjct: 1 MNRLEYAI-LALAGDLTVDDLSILQSHNIGLKELTTSRIEL--LNERKQKQIISKCRS-V 56 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHS 119 E L + I + YP +L A+ P LF EG L+ LA+VGSR + Sbjct: 57 EKKLKEFR----NFITFQDQQYPEKLKASLFPPPVLFYEGNPDILNEENSLAIVGSRKAT 112 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG + F L G+ I SGLA GIDG AH+ +LQ G ++AVLG+G++ ++P+ + Sbjct: 113 QYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVLGSGIDIVYPKSN 172 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 +L + + E G +VSEF PP+ YNFPRRNRII GLSK VLVVEA RSGSL+TAR Sbjct: 173 RKLFSFITEH-GCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARL 231 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 AL+ GR+VFA+PG I SEG +WLI+ GA L+ E+ILE Sbjct: 232 ALDNGRDVFAIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEF-------------PTV 278 Query: 300 SPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 S +L + + E E++ +L L+L G + G + Sbjct: 279 SRSSSKDIQIKSSVLKVLSEFGELEFSELLEHTKLEHTELLLELTRLQLEGLVTESTGKW 338 Query: 359 VR 360 Sbjct: 339 RA 340 >UniRef50_C7NA26 DNA protecting protein DprA n=4 Tax=Leptotrichia RepID=C7NA26_LEPBD Length = 363 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 161/372 (43%), Gaps = 30/372 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 WLRL + + ++ + + + + + + L Sbjct: 3 WLRLKE-YGMKNAHIKKLMLIFQDFEELFYEENFKL-FNDELKSQLEEAMKIDMTARLEL 60 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE--------------LHALHSFQLAV 112 E+ +I A+ + YP +L D+P L+++G+ + + + + Sbjct: 61 YERNRVRIISANDKEYPKKLKEIKDFPVFLYLKGKKLKDYDKIKIDKGKISVDNKRNIGI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + +G+ L VT+ SGLA GID +A K AL ++V+G GL+ Sbjct: 121 VGTRRATKFGKTACEKIVNELVNYEVTVISGLADGIDTIALKTALDKEIEVVSVVGTGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P + L + E G L+SE+PL P + FPRRNRII+G+S GVLV E+ + G Sbjct: 181 IVYPYENRDLWERIGE-VGTLISEYPLGTQPTRWTFPRRNRIIAGISDGVLVAESFKKGG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP 291 +L+TA A REVFA+PG I P EG + LIK A LVT +I E + + Sbjct: 240 ALITAELAFSMNREVFAVPGFINYPSFEGCNDLIKNNKAKLVTCGNDIAEEFLWDIKK-- 297 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVP--EVVTQLLELELAG 349 Q + + + +E + + + + + ++ + ++ L++ G Sbjct: 298 -------EKSKLQKLTSEEQIVFETIMEE-VSFEQILQNVKEKIEKNKLFSIIMSLKIRG 349 Query: 350 WIAAVPGGYVRL 361 I G Sbjct: 350 LITETNGAKYIR 361 >UniRef50_A5ZQR1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQR1_9FIRM Length = 302 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 147/286 (51%), Gaps = 5/286 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I +S YP +LL P L+V G L +A+VG+RA S YG + L+ Sbjct: 19 ISKESPEYPQKLLHYEGMPEILYVRGTLPDPRRPAVAIVGARAASPYGRMQAFRYARRLS 78 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV I SG+A GID AH+ AL+ G + AVLGNG++ +P + L +L + ++ Sbjct: 79 EEGVQILSGMAYGIDTEAHRGALEGEGGTWAVLGNGVDICYPSGNRALYQRILREKCGIL 138 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P Y FP RNRIISGL+ V++VEA +SGSL+TA+ AL+QG+ VFA+PGP+ Sbjct: 139 SEQPTGTRARNYFFPARNRIISGLADLVVIVEAREKSGSLITAQWALDQGKSVFAIPGPV 198 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 S G + LI GA + PE +L L + ++ +A + Sbjct: 199 TEELSMGCNKLIYDGAGIAYTPEILLRELGID-----CEKIVKVKTKNELGLATDLKLVY 253 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + V+ + ++ G +V LLEL+++G + Y Sbjct: 254 SCLDLQPKSVEFLIQKTGLSPEKVGGLLLELKISGLAREIGRHYYV 299 >UniRef50_C9S072 DNA protecting protein DprA n=4 Tax=Geobacillus RepID=C9S072_GEOSY Length = 293 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 141/294 (47%), Gaps = 9/294 (3%) Query: 1 MVD--TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLS 54 M D + + L + + + ++ L+ Q F Sbjct: 1 MYDTVRDRLIHLHHCRGAGWKTIHSLLKVDPTLTAPFSLPPNDLRPLVPLSDAQWTAFFH 60 Query: 55 FPRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 ++ + + +I YPP L P L+ +G+ L +++ Sbjct: 61 DLHSIDVQRVIKTYKGRCIRVITVFDSDYPPLLKYIYAPPWVLYAKGDSALLQEWKLISI 120 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + G L G TI SGLA GID AH+ A+Q G +IAV+ GL+ Sbjct: 121 VGTRRPTKEGIEALNKLVPPLVAAGFTIVSGLAFGIDVCAHQLAVQYGGSTIAVIAGGLD 180 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+P+ H A+LL +++E P P A+ FP RNRIISGLS G LVV+A +SG Sbjct: 181 HIYPKEHRP-FATLLMNEQLVIAEHPPATRPQAWQFPARNRIISGLSLGTLVVQAKRKSG 239 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 SL+TA ALEQGREVFA+PGPIG S GP+ LI+ GA LV E +IL+ + Sbjct: 240 SLITAAYALEQGREVFAVPGPIGLAESAGPNTLIQHGAKLVQEAADILDEFPYV 293 >UniRef50_C0W7A4 DNA protecting protein DprA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7A4_9ACTO Length = 437 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 157/341 (46%), Gaps = 36/341 (10%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--------- 109 I L LE+ L+ ++P L P L+V G+ L Sbjct: 95 DIRRELEVLERLGGSLVLPGDAWWPQGLDELDQPPACLWVRGDPALLACRSDGADSTMRP 154 Query: 110 --------------------LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 LA+VGSRA + YGE+ LA G + SG A GID Sbjct: 155 SDPGRFRQDLVAQGPATGLSLALVGSRASTRYGEQVASQMAAQLADHGAVVVSGGAYGID 214 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 AH+ AL+ G +I+V G++ ++P +A L ++E GALV+E P P + F Sbjct: 215 AAAHRGALRT-GRTISVSAGGVDRLYPAGNATLLQEVIEH-GALVAEVPPGCQPGRHRFL 272 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNR+I+ +S+ +V+EAA RSG+L TAR A + GR + A+PGP+ + S G H L+++G Sbjct: 273 SRNRLIAAMSQATVVIEAAWRSGALSTARHAADLGRPLGAVPGPVTSMESAGCHRLLREG 332 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPD----QQDVALPFPELLANVG-DEVTPV 324 A+ VT+ +E LE + P+A + + + + +L + V Sbjct: 333 AVCVTDADEALELVLPLGLTDPEADKEADPARAGSGLLDGLDRSSAAVLDAMPARGAASV 392 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + +A AG EV L LELAG + P G+ R + Sbjct: 393 EALARSAGLAESEVRAALGLLELAGKVCRDPRGWWRRASSG 433 >UniRef50_B2GC52 DNA processing protein n=12 Tax=Lactobacillus RepID=B2GC52_LACF3 Length = 291 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 141/299 (47%), Gaps = 16/299 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAH------WVAKQSHIDAVVLQQTGLTLRQAQRFLS 54 M E RL L VR+ ++ Q+ +T R + L Sbjct: 1 MQPREFIFRLSLCPGLGPLSRVRLWRVAEQNYCFDN----LELLTSQSQITPRVKESLL- 55 Query: 55 FPRKSIESSLCWLEQPNHHL--IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + L L + N+ + I YP L P L+ +G LAV Sbjct: 56 --KNWASPYLDRLVEQNYRVPQITLLDPDYPAILREIYCPPLVLYYQGNRDLFKMPALAV 113 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSR + YG ++ +TI SGLARGID +H+ AL G I V+G GL+ Sbjct: 114 VGSRQATSYGFTVLEKLIPSVVNHRITIVSGLARGIDSRSHEQALASGGAVIGVIGTGLD 173 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR + L A + +Q G L++E+PL PPL +FP RNRII+GL + LVVEA +SG Sbjct: 174 QTYPRSNGALQAQVADQ-GLLLTEYPLQTPPLPSHFPARNRIIAGLCQTCLVVEAKQQSG 232 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 SL+TA AL++ R V A+PGPI +P S G + LI +GA + +++L Sbjct: 233 SLITANLALQENRNVCAVPGPITSPTSLGTNELISEGAQPILNSKDLLAEFDPWFEAEA 291 >UniRef50_C7CSL8 Predicted protein n=22 Tax=Enterococcus faecalis RepID=C7CSL8_ENTFA Length = 293 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 4/284 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTL-RQAQRFL--SFPRKS 59 ++ +L + ++++ Q +D + + ++ + S+ + Sbjct: 11 QRQLLFKLAVCQGIGNLGILKVLQEAVAQKRVDFSSTEIIRIAEIKKYRELFEQSWLHHT 70 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 I S ++ Q H + YP L + P LF G L L ++ +VG+R + Sbjct: 71 IHSEALYIRQCQHQFMTILDAVYPKLLREIYNPPAILFYRGNLQLLSRRKIGIVGARYAT 130 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YG R + G TI SGLA+GID +H+ A+Q G +I +LG GL+ +P Sbjct: 131 SYGLRVTEALVPKIVKEGFTIVSGLAKGIDSRSHEMAIQNGGQTIGILGTGLDVYYPYEK 190 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L ++Q +++E+ P Y+FP RNRII+GLS GV V+EA SGSL+TA+ Sbjct: 191 KEL-QQTMKQNQLVLTEYVNGSGPKKYHFPARNRIIAGLSLGVCVMEARKNSGSLITAQA 249 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A++ GREVFA+PG I S G H LI+ GA V ++I E L Sbjct: 250 AMDYGREVFAVPGSIFQSFSTGCHELIQDGAKCVQTIDDICEEL 293 >UniRef50_C2ME16 Smf protein DNA processing chain A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME16_9PORP Length = 384 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 17/377 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI-- 60 + L + + + + + + A L R Sbjct: 7 EHLCIYALTQLKGVSLQLARHLIEFAGSATALWADPQALARLNSHVYTHLYPLLRDRAKL 66 Query: 61 ---ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSR 116 ++ L ++ YPP LL D P LF G+L LH L+VVG+R Sbjct: 67 EETQALLQRTADLGILMVSIYDADYPPLLLQCADAPLILFYLGDLAPLHAEQTLSVVGTR 126 Query: 117 AHSWYGERWGRLFCETL--ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 S +G + L T VTI SGLA G+D V+HKAALQ ++AVL +GL+ I Sbjct: 127 KPSQHGVEDLQTIISHLPSVTDSVTIVSGLALGLDAVSHKAALQAGLPTVAVLAHGLHMI 186 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P H LA S++ GGAL+SE+P V P + F RNRI++GL++ LV ++A R GSL Sbjct: 187 YPSNHRNLARSIVSHGGALLSEYPAGVKPQRHQFVLRNRIVAGLTQATLVGQSAERGGSL 246 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLP-- 291 +TA A + R V+ALPG + +EG + LI A L+T + E+L++ Sbjct: 247 ITAHQAFDYDRAVYALPGRPSDRENEGCNNLIYNNIAKLITSATHLCEDLEWKKPDHEAR 306 Query: 292 ----DAPENSFYSPDQQDVALPFPELLANV--GDEVTPVDVVAERAGQPVPEVVTQLLEL 345 S + + + LL + + +D + ++ V EV +L L Sbjct: 307 SAVGSMSHESKLNALRARLEPKTRPLLDLLIESGDGLSIDAICDQTLMGVDEVSFRLFLL 366 Query: 346 ELAGWIAAVPGGYVRLR 362 E G ++ P G +L+ Sbjct: 367 ESDGAVSLQPDGRYKLQ 383 >UniRef50_A0LV60 DNA protecting protein DprA n=3 Tax=Actinomycetales RepID=A0LV60_ACIC1 Length = 391 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 15/370 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-KSI 60 + L ++ ++ + + I + + L + A+ + + Sbjct: 24 TERLARALLSRVTEPGDRELAALLTRY-AATEIVRDLRRD-RLPVTNARHWRTRLSTARP 81 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTD-------YPGALFVEGELHALHS-FQLAV 112 E+ L +E+ + +P QL P L++ G + +AV Sbjct: 82 EADLHAVERLGGCFVVPGDSEWPAQLDDLGRVPGEYSVPPVGLWLRGAGKLADADRTIAV 141 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VGSRA + YGE F LA RG + SG A GID AH+ AL G ++AVL G++ Sbjct: 142 VGSRAATGYGEYVAAEFAIGLAERGFLVVSGGAYGIDAAAHRGALAGGGATVAVLACGVD 201 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR +A L +L G L+SE+P P+ + F RNR+I+ L+ G +VVEAA RSG Sbjct: 202 VCYPRGNATLFHRILST-GLLLSEWPPGCAPMRHRFLVRNRVIAALASGTIVVEAAARSG 260 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLP 291 +L TA A + GR V A+PGP+ +P S G + L+++ +T ++++E + L Sbjct: 261 ALNTANRARDLGRHVMAVPGPVTSPLSAGSNQLLREPDVCCITRADDVVEIVG-RLDPSI 319 Query: 292 DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 + S + + +L V +A AG +P+V+ L L G Sbjct: 320 APTPGAPPSSARDRLDGVTRRVLDAVPARRSAGPAGIALAAGLALPDVLAALGRLAADGL 379 Query: 351 IAAVPGGYVR 360 + G+ Sbjct: 380 VERTDAGWRV 389 >UniRef50_D2PZG0 DNA protecting protein DprA n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZG0_9ACTO Length = 445 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 106/375 (28%), Positives = 153/375 (40%), Gaps = 20/375 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 D L + + + I ++ R + R P Sbjct: 75 DRFARAALSRVIEPGDPAALTTFAGL-TPLEIWDLLHSTAPGLERWSTRL---PHVDPAR 130 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEG--ELHALHSFQLA 111 L I + +P QL TD P L+V G L L + +A Sbjct: 131 DLDRAHAAGGRFIIPGDDEWPDQLEVLTDAGQQSRRGGVPFGLWVRGTPNLRELLANSVA 190 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+RA S YGE L G + SG A GID AH+ AL +G +IAVL G+ Sbjct: 191 IVGARACSSYGEHTAAELAAGLGDHGTAVVSGGAYGIDAAAHRGALASSGTTIAVLACGV 250 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P+R++ L + + G L+SE P P F RNR+I+ + G +VVEAA+RS Sbjct: 251 DVSYPKRNSALFDRIAAE-GLLLSELPPGCSPTKLRFLARNRLIAAATLGTVVVEAAIRS 309 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWL 290 G+L +A A + GR V A+PG + + SEG H LI++ A L T +ILE + L Sbjct: 310 GALNSAGWAEQCGRAVLAVPGAVTSRMSEGAHLLIRERNATLATSVADILEAISPLGEHL 369 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 P + L V P +A AG + V L L+ A Sbjct: 370 TTYPH--AAPTPIDALDHDLRRTLDAVPVLRPAPAHRIAITAGLDLATVQECLETLDQAH 427 Query: 350 WIAAVPGGYVRLRRA 364 I P G+ R+ Sbjct: 428 LIEYTPTGWHLTRQT 442 >UniRef50_C0BL39 SMF family protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BL39_9BACT Length = 378 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 14/365 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-QQTGLTLRQAQR----FLSFPRKSIES 62 LRL ++ + +I L++++++ + K Sbjct: 12 LRLQALPGVGAKTARKIIAHYGSAHAFFESPRDSSIVLSVKESKTPSDYLHALYLKLATD 71 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 ++ + YP L +D P LF +G L +AVVG+R + G Sbjct: 72 EFDFILANKIQTFYFEDANYPYFLSLASDAPVLLFGKGHLDTGTKKIIAVVGTRKMTGMG 131 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + F E + I SG A+GID +AA + +I L +G I+P ++ Sbjct: 132 REFCEQFIEEIKPLDPVIVSGFAKGIDITIQRAAAEQGLQTIGCLAHGFKRIYPAQNRPY 191 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 ++EQGG +EF + L +F RNRII+GLS+ LVVE+A + G+L TA+ A Sbjct: 192 IKDVMEQGGF-YTEFFSGMHALPGHFVSRNRIIAGLSQATLVVESAKKGGALHTAQLANS 250 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 R VFA+PG + S G + LIK A ++T +++ ++ + Sbjct: 251 YDRPVFAVPGRTTDFFSVGCNDLIKHLKAQMLTHSRDLINSMNWQDQPGIVLNMGLTCGT 310 Query: 302 DQQ------DVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 + + + L + + VD +A + + L+ LEL G + + Sbjct: 311 ELETKDKATNHTAEESVLYQCLFSNGKMHVDQLASVLNWEIKVLYPCLMTLELKGGVRHL 370 Query: 355 PGGYV 359 PG + Sbjct: 371 PGQFY 375 >UniRef50_A8UBT0 DNA processing protein DprA, putative n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBT0_9LACT Length = 289 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 99/279 (35%), Positives = 147/279 (52%), Gaps = 3/279 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS--L 64 L + +R+ + H+ A L R +++ + L Sbjct: 10 LFHLTLCKGIGATSRIRMLSSLMDSPHLSAYELAFCAQLNAANTRLFMDSYAAVDRAVAL 69 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 ++ + + + YP L + P LF +G+L L+ LA+VGSR S YGE+ Sbjct: 70 NEYKKRHIKWVSILDQSYPEYLKHIYNPPALLFYQGDLTLLNQKLLAIVGSRLTSSYGEK 129 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + L T G+T SGLA+GID + H+ +++ G +IA++G GL+ +P + +L Sbjct: 130 ALTILLPELITNGITTVSGLAKGIDRLVHEKTIELGGRTIAIIGTGLDQFYPFENEKLQK 189 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + + L+SE+PL PL +FP RNRII+GLS G LV+EA RSGSL+TA AL++G Sbjct: 190 EI-AKNHLLISEYPLGTKPLKQHFPMRNRIIAGLSLGTLVIEAKYRSGSLITANIALQEG 248 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 REVFA+PG I NP SEG + LI GA V + ILE Sbjct: 249 REVFAVPGNITNPYSEGTNDLILHGAKCVLTADHILEEF 287 >UniRef50_A1BA43 DNA protecting protein DprA n=3 Tax=Rhodobacterales RepID=A1BA43_PARDP Length = 418 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 117/398 (29%), Positives = 173/398 (43%), Gaps = 45/398 (11%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 LRL+ + R+ A + + + PR + E+ + Sbjct: 24 LAILRLIRSRRVGPATFHRLLDEHGSAEAALAALPAIARAAG--VEDYAPCPRAAAEAEI 81 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 + L+ YP L D P L++ G++ L +AV+G+R S G R Sbjct: 82 AAGHRAGARLLTWGDPDYPALLREVADAPAVLWLRGDISVLARMPVAVIGARNASSLGLR 141 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 R L+ G + +GLARGID +AH+AAL +G +IAV+ G++ I+P +A LA Sbjct: 142 MARGMASGLSQSGAAVVAGLARGIDTIAHEAAL--HGGTIAVMAGGIDKIYPGENAALAE 199 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + E G LV+E P P+A +FP RNRIISGLS+ V+VVEAA RSGSL+TARC L+QG Sbjct: 200 EICET-GLLVTEQPPGTEPVARHFPARNRIISGLSRAVVVVEAAYRSGSLITARCGLDQG 258 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQ 304 REV A+PG + + G + LI+ GA LV ++L LQ Sbjct: 259 REVMAVPGHPMDARAGGCNALIRDGATLVRNSADVLAALQSNDPIAAKQAPAENPVEATP 318 Query: 305 DVALPFP----------------------------------------ELLANVGDEVTPV 324 P +LA +G T Sbjct: 319 AAVAAMPVQVRQPAAVARRLAELGHGIHHRPMMGRPRDAGGPVNLEGRILARLGPSPTEE 378 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +++ G P + +L LEL+G + + GG + L Sbjct: 379 NMLIRDLGVPAAVLAPAILALELSGRVQRIAGGKLALN 416 >UniRef50_Q2B7E1 DNA processing protein (Smf family protein) n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7E1_9BACI Length = 281 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 103/272 (37%), Positives = 149/272 (54%), Gaps = 12/272 (4%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR-------KSIESSLCWL---EQPNHHL 74 H + S I + + + + F R S+E ++ + E+ H Sbjct: 11 LHHKSSWSSIYHFLKKDPHMKTSLSAAFSEPDRKLFFPTNSSLEKTIEKIRQYEKYGIHC 70 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCETL 133 I YPP L P L+ +G++ LH +LAVVGSR + YG + L Sbjct: 71 ITIFEPEYPPLLKEIYQPPWVLYAKGDISFLHLDPKLAVVGSRQITGYGRSAIKKVFPGL 130 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 +GVTI SGLA G+D AH+ A+ + G +I V+ GLN I+P+ + RLA ++E + Sbjct: 131 VGKGVTIVSGLAAGVDAEAHETAISLGGRTIGVIAGGLNHIYPKSNERLARRMMEDH-LV 189 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P D P + FP RNRIISGLS+G ++EA +SGSL+TA A+ +GR+VFALPG Sbjct: 190 ISEYPPDARPDRWQFPMRNRIISGLSQGTFIIEAKSKSGSLITANYAVNEGRDVFALPGS 249 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 I +P S G + I+QGA L+ + EILE L F Sbjct: 250 IFSPASAGTNEWIQQGAKLIADASEILEELNF 281 >UniRef50_A8YV46 DNA processing protein chain A n=27 Tax=Lactobacillus RepID=A8YV46_LACH4 Length = 282 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 3/276 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRKS 59 M E LRL + ++ IA+ + I+ L++ L+ + L+F Sbjct: 1 MKKKEFLLRLKLQKGVGYVKLLTIANQMKPGLEIELDDLKEMDLSEKLVDACHLAFNDDK 60 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 + + + +I E YP +L P LF +G L L + +VGSR + Sbjct: 61 LAKLTRQIRRQCI-VISFFDEEYPEKLRQIYRPPLILFAQGNLSLLKKDIVTIVGSRYPT 119 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 Y L + I SGLARG+D +AH+A L+ NG ++AV+GNGLN +P+ + Sbjct: 120 HYSRDVINRLVPNLLDQNKVIASGLARGVDALAHEATLKNNGRTVAVVGNGLNHSYPQEN 179 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L + + G ++SE+ D PP Y FP+RNRI++GLS+ ++V EA +SGSL+TA Sbjct: 180 YSLQEQI-KNDGLIISEYLPDTPPRPYRFPKRNRILAGLSESIIVTEAKEKSGSLITASL 238 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 L++ R+++A+PGPI + S GP+ LI+ GA + + Sbjct: 239 GLQENRDIYAVPGPITSKLSAGPNQLIEAGATPIVD 274 >UniRef50_C4XKF8 SMF protein n=2 Tax=Desulfovibrio RepID=C4XKF8_DESMR Length = 455 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 120/326 (36%), Positives = 156/326 (47%), Gaps = 5/326 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLSF--PRK 58 + LRL + + RI A GL A L+ + Sbjct: 23 ECLACLRLRLQPGIGPRTVRRIFDRYDSAVAALADARSFGPQGLCPDDAAAALARGLTSR 82 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + E+ L +P YP +L D P L+V G++ L +A+VG+R Sbjct: 83 AAETELAAAAAKGLTPLPYFHPAYPARLRELPDPPAMLYVVGDVTLLSGPCVAMVGARQC 142 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S YG LA GVT+ SGLA GID AH L G S+A+LG GL+ ++P Sbjct: 143 SRYGFGAAFDIAAGLAGAGVTVVSGLAYGIDRQAHLGGLAGPGRSVAILGTGLDLVYPDA 202 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + + L GGA+VSEF PP A NFP RNRII+G+S GV+VVEAA RSGSL+TAR Sbjct: 203 NLDVWRE-LAAGGAVVSEFAPGTPPRAANFPVRNRIIAGMSLGVMVVEAAERSGSLITAR 261 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 ALEQGREVFALPGP+ P G H L+ QGA LV ++I+ L L AP + Sbjct: 262 LALEQGREVFALPGPVNLPTFAGCHALLSQGARLVQTADDIVSALARELAPFVGAPRPAP 321 Query: 299 YSPDQQDVALPFPELLANVGDEVTPV 324 + + V P A D Sbjct: 322 PARAPRRVTPPVAASQAAPPDRPGRP 347 >UniRef50_D1WZE4 DNA protecting protein DprA n=18 Tax=Streptomyces RepID=D1WZE4_9ACTO Length = 442 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 149/375 (39%), Gaps = 15/375 (4%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQS---HIDAVVLQQTGLTLRQAQRFLSFPRKS 59 + L + + R + L A R + ++ Sbjct: 63 ERLARAALTRVLEPGDERAGRWLRRTGPVELMRRLTVDDGSAERLPGMTAARLGGYRLRA 122 Query: 60 IESS----LCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAV 112 + L + + +P QL D P L+V G +L +AV Sbjct: 123 AGAEPGRDLAAVAAVGGRFVCPGDREWPSQLDDLGDARPVGLWVRGRPDLRLWSLRSVAV 182 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+RA + YG LA RG + SG A G+DG AH+ AL G + AVL G++ Sbjct: 183 VGARACTPYGAHMAAALGSGLAERGWVVVSGAAFGVDGAAHRGALGAGGATTAVLACGVD 242 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 +PR HA L L Q G +V+E P P F RNR+I+ L++G +VVEA RSG Sbjct: 243 VAYPRGHAELLGR-LAQQGLIVAELPPSSHPTRSRFVLRNRVIAALTRGTVVVEAEYRSG 301 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 SLVTAR A GR +PGP + S G H L++ LVT+ +E++E + P Sbjct: 302 SLVTARQAQRLGRFAMGVPGPATSGLSAGVHELLRGEGSLVTDADEVVELVGDIGDLPPV 361 Query: 293 APENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELAGWI 351 + + +L + V +A AG E + +L EL G++ Sbjct: 362 R---RGPVLPRDHLDAVTARVLDALPYHGVAHPRDLARTAGTSADETLGRLYELHSLGFV 418 Query: 352 AAVPGGYVRLRRACH 366 + Sbjct: 419 EREGDDWRLTPPPAR 433 >UniRef50_Q720E7 Smf family protein n=13 Tax=Listeria RepID=Q720E7_LISMF Length = 286 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 12/293 (4%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAH---WVAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M WL++ S S+ I + + + AQ + Sbjct: 1 MDFKQRHTWLKIASCKSISAKKRASIWQKLTEFDQYEMTTQTFAESFFPVDKLAQILMEL 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + LI + YP L + P LF +G + L +A+VG+ Sbjct: 61 ------ETAEACFFDDVTLIWILDDAYPALLREIYEAPPILFCKGNIDLLQQQAIAIVGT 114 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG + LA +TI SG+A GID AH+A L G +IAVLG+G+N ++ Sbjct: 115 RQMSEYGRKACMKIASELAENKLTIVSGMAIGIDSTAHRATLNKQGATIAVLGSGVNKVY 174 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P+++ LA ++ + G L+SE+ D ++FP RNRIISGL+ G +++EAA RSGSL+ Sbjct: 175 PKKNELLAKEIV-KEGLLLSEYLPDEEAKRWHFPERNRIISGLAIGTVIIEAAERSGSLI 233 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 TA ALEQ R+VFA+PG I +G ++LI++GA LV I+E Sbjct: 234 TADIALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNSNNIIEEFIQIKP 286 >UniRef50_UPI00016C495A DNA protecting protein DprA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C495A Length = 396 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 121/398 (30%), Positives = 177/398 (44%), Gaps = 38/398 (9%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M D L L + L + + + + A + Sbjct: 1 MSDVNDHLALALVPGLGPKLTAALLERFGTAAAALRATAADLVQIPHIGEKLATALAAAL 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 R +I+S L LE+ + S YP L A P L+V G A + +VG+ Sbjct: 61 RAVNIDSELALLERHGVRPVALGSSEYPAPLAAVPAPPPLLYVRGAWVAADVNAIGIVGA 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R+ + YG+R L G T+ SGLARGIDG AH+AAL G +IAVL GL++I+ Sbjct: 121 RSCTAYGKRLAEQISRDLVRAGFTVVSGLARGIDGAAHRAALAAGGRTIAVLAGGLSSIY 180 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P HA LAA + G LV+E P+ V P FP RNRIISGLS+G++V+EA +SG+L+ Sbjct: 181 PPEHADLAAE-VAGNGCLVTETPMAVAPQPGMFPARNRIISGLSRGIVVIEANAKSGALI 239 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWL----- 290 TA A EQGRE FA+PG + + S G L+++GA LV ++I+E+L+ Sbjct: 240 TATHAAEQGRETFAVPGNVDSAASAGCLELLRKGARLVRGADDIIEDLKGIATADYPAGS 299 Query: 291 --------------------------PDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 A P + + + + D+ Sbjct: 300 MDRGLAPAGTQYKGAQGHPSQEDAVTGRAVREDVPRPPAPILDVTQQRVFDALADK-RHA 358 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 D +A G V E+ L++LEL + +PG + R Sbjct: 359 DELARELGVAVGELSRILMQLELKKVLRRLPGNFYERR 396 >UniRef50_B7ATP7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP7_9BACE Length = 303 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 13/305 (4%) Query: 1 MVDTEIW-LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT-----GLTLRQAQ---- 50 MVD E L +I + + + + Q+ G +R + Sbjct: 1 MVDEEFCVYWLNNIRGIGNTKISELMAIFGSACGVYNAGEQELKDAMSGSNVRFSHGDFD 60 Query: 51 -RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 + + L YP +L D P L+ +G L + Sbjct: 61 NLIACRNAEWVRREYESLVAKQIAFTYPGRADYPVRLGMIYDAPHILYYKGHLPD-AAPS 119 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+RA S YG + +F LA GV I SGLA GID +A+ + G + AVLG+ Sbjct: 120 VAIIGARACSAYGRQIAEMFGRELARAGVQIVSGLATGIDTFGQRASAEAGGRTFAVLGS 179 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G++ +PR + L A + GG ++SE+P P A NFP RNRIIS L+ V+VVEA Sbjct: 180 GVDVCYPRSNIGLYADTMIHGG-ILSEYPPGTKPSAGNFPVRNRIISALADVVVVVEARR 238 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 RSG+L+T ALEQ +++ A+PG +G+ SEG ++L+KQGA +VT+ +ILE L + Sbjct: 239 RSGTLITVDAALEQNKDIMAVPGRVGDVLSEGCNYLLKQGAHVVTQTRDILEILGINIIN 298 Query: 290 LPDAP 294 Sbjct: 299 KKRKK 303 >UniRef50_A7GRG4 DNA protecting protein DprA n=60 Tax=Bacillus RepID=A7GRG4_BACCN Length = 291 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 102/287 (35%), Positives = 155/287 (54%), Gaps = 7/287 (2%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR- 57 E L L + + + ++ H + + +Q GL+ + + ++F + Sbjct: 4 KRERLLHLHYFLADHWKVLKKLLHMDPQLIDVYNFSSEQFEQYTGLSPKLSFELVNFLQT 63 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSR 116 + + LE+ + E YP L D P L+ +G+ L + AVVG+R Sbjct: 64 STPPQCMQHLEKNQTFYVTIWDEDYPRLLREIPDPPFVLYGKGQRGYLKNINTFAVVGTR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y + + L +G I SG A GID +AH+ A++ G +IAVLG+GL ++P Sbjct: 124 KPSLYSRESIQSILQPLINKGWLIVSGFASGIDTMAHRIAVEQEGATIAVLGHGLQYMYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + RL ++ ++ L++E+P PP + FP+RNRIISGL KG+LV+EA RSGSL+T Sbjct: 184 KENDRLY-AIWKKQMLLLTEYPPHYPPKKWYFPKRNRIISGLCKGILVIEAKARSGSLIT 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A ALEQ REVFALPGPI + G + LI+QGA LV ++ILE Sbjct: 243 ADFALEQNREVFALPGPIFVESACGTNQLIQQGAKLVQNAKDILEEF 289 >UniRef50_C8NEN5 DNA processing chain A n=2 Tax=Granulicatella RepID=C8NEN5_9LACT Length = 288 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 13/292 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAK------QSHIDAVVLQQTGLTLRQAQRFLSF 55 ++ + + L + + + V T + + F Sbjct: 4 TKRKLLIGIAISEKLNSKQFYELFQKLNDDVSLIHPFVLGDVKFSLPEETSKWLETF--- 60 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 +S ++ ++ YP +L P LF +GE L+ +A+VGS Sbjct: 61 ---DWLASFEKMKVEKVKVLTILDAEYPRRLKEIYLPPIVLFYKGEWSLLNERLVALVGS 117 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R HS Y ++ + + L + + I SGLA+G+D +AH L+ +G +IAV+G+GL+ ++ Sbjct: 118 REHSNYAKQCTKTIVQDLVQKKIGIISGLAKGVDSLAHLECLKDDGKTIAVIGSGLDVVY 177 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P +A L + E+ G ++SE+PL PL ++FP RNRII+GLS GV VVEA RSGSL+ Sbjct: 178 PPENANLYKEIGEK-GLIISEYPLGSRPLKFHFPYRNRIIAGLSHGVCVVEANERSGSLI 236 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 TA AL + REVFA+PG I + S+G + LI+ GA LV+ E I +NL + Sbjct: 237 TANIALSENREVFAIPGSIFSSHSKGTNQLIEAGACLVSSAETIDKNLHYFP 288 >UniRef50_B1MYG1 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=3 Tax=Leuconostoc RepID=B1MYG1_LEUCK Length = 289 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 100/286 (34%), Positives = 145/286 (50%), Gaps = 1/286 (0%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L L + R+ H++ + +T + +S Sbjct: 2 MNLRTQLLALTMTEGIGLVTRTRLLHFIISGNLPTQYPWSLETITRLAEPQQCMRIAQSY 61 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + +L + E YP L P LF EG L AL L+VVG+R + Sbjct: 62 DKALDRASTFQLPYLSYFDEAYPEALREIHQPPLILFYEGNLDALKLPSLSVVGTRLATP 121 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YG R T+ ++G++I SGLA+GID +AH+ GV I V+G GL+ ++P RHA Sbjct: 122 YGLETIRHLLPTVISKGISIVSGLAQGIDVMAHQITFAACGVPIGVIGTGLDVVYPNRHA 181 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + G L+SE+P PL +FP RNRII+GLS LV+EA RSGSL+TA A Sbjct: 182 ALQKQI-ANSGLLISEYPAGSKPLRSHFPERNRIIAGLSSATLVIEAKKRSGSLITANLA 240 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 L+ R+V A+PG I + ++G + L+ GA LV +PE+ILE++Q Sbjct: 241 LQNNRDVLAVPGSIFSETAQGTNELLSLGAKLVVQPEDILESVQLL 286 >UniRef50_D0WR54 DNA protecting protein DprA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR54_9ACTO Length = 468 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 139/305 (45%), Gaps = 12/305 (3%) Query: 73 HLIPADSEFYPPQLLATTD-YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCE 131 + +P L D P L+ G+ L AVVGSR S YG + Sbjct: 165 GFVMPGDPLWPAALDDLGDTRPLGLWFRGDGKVLARAGAAVVGSRDSSPYGVKIATDVAY 224 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 LA GV + SG A GID AH+ AL +G ++AV G++ +P HA L +L +GG Sbjct: 225 ELADSGVNVVSGGAFGIDVAAHRGALAADGYTVAVSACGVDRYYPASHADLYLEILRRGG 284 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 A+ SE P P + F RNRII+ LS+ V+VVEA RSG++ TA A+ GR V A P Sbjct: 285 AICSEAPPGAAPHKHRFLSRNRIIAALSRAVVVVEAPFRSGAISTAHHAMSIGRPVGAFP 344 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE---------NSFYSPD 302 GP+ +P S G H L+++GA VT+ E+LE + + Sbjct: 345 GPVTSPRSSGCHRLLREGAACVTQIREVLELMGMEAKLGGQPGPGEPPTPGGLQTERQLA 404 Query: 303 QQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + + P + VA AG V E +T L LE G A G + +L Sbjct: 405 LDVLDPLASRVCEALPVSRGAPAEKVAAVAGVSVTEALTGLGRLERQGIAARNAGLW-KL 463 Query: 362 RRACH 366 R Sbjct: 464 ARKGR 468 >UniRef50_C4LJB2 Putative DNA processing protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB2_CORK4 Length = 435 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 99/387 (25%), Positives = 166/387 (42%), Gaps = 25/387 (6%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVA---KQSHIDAVVLQQTGLTLRQAQRFLSFP-RKSI 60 + W L + ++ + S ++ + L + S Sbjct: 50 QAWAYLNRVVEGPNAHLLALIWESGESDPVSAAIRIIRRDPSLPPKVLSATESRCGWFQP 109 Query: 61 ESSLCWLEQPNHHLIPADSEFYP-PQLLATTD----------------YPGALFVEG-EL 102 + L I D + +P P L + P L+V+G Sbjct: 110 LADLHSAASVGACFITPDDDAWPGPVLAESFHVSRTADGAKSHHDDAIPPHGLWVKGGNA 169 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 AL + VVG+RA + YG AT G T+ SG A GID AH+AAL+V Sbjct: 170 RALTEKAITVVGTRAATRYGNAVAADIGAECATHGWTVVSGGAFGIDISAHRAALRVGHS 229 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++A++ +G++ +P H + + G +++E+P P + F RNR+ + L +GV Sbjct: 230 TVAIVAHGIDVTYPAAHRTEFNDI-AREGVVITEYPPGTRPARHRFLTRNRLSAALGQGV 288 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 +V+EA RSG+L T A G++VFA+PG + + S G H LI++G A L+ +++E Sbjct: 289 VVIEAGYRSGALNTVSWAETMGKQVFAVPGAVTSRSSHGCHRLIREGRAELIESGADLIE 348 Query: 282 NLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 +L DA E + + D Q + P + V + + +A +G P+ + +T Sbjct: 349 SLSPLGTLDSDAQLEMDYPATDVQRLDRPSLRVYDAVSGKRSDAAAIAASSGLPLVQTMT 408 Query: 341 QLLELELAGWIAAVPGGYVRLRRACHV 367 L EL G I+ + R A V Sbjct: 409 ILCELRDKGLISRSGNLWERDTAASTV 435 >UniRef50_A4AH10 DNA processing factor n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH10_9ACTN Length = 434 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 106/395 (26%), Positives = 163/395 (41%), Gaps = 39/395 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-----------DAVVLQQTGLT----- 45 + ++ R + + A L G Sbjct: 32 ENRFARATWSGLAEPGDRLAGRAIQQLGSARSLTAVVEHWDAEQFATELSADGDPVSGDD 91 Query: 46 -LRQAQRFLSFPRKS-IESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGEL 102 + R++ + +L + L+ D +P +L P AL+V G Sbjct: 92 MRQAIDRWMPRLKSDTALIALRQAARFGSRLLIPDDSLWPERLHDLDWHAPSALWVRGTD 151 Query: 103 HALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN 160 AL +A+VG+RA + YGE L RG TI SG A GIDG+AH+AAL + Sbjct: 152 AALAGIVDGIALVGARAATGYGEHITMEASAGLVDRGYTIVSGAAYGIDGMAHRAALASH 211 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G+++A L G++ +P H L + ++E GA++SE P PP + F +RNR+I+ S Sbjct: 212 GLTVAFLAGGVDRFYPSGHDSLLSRIVE-NGAVISELPCGSPPTKWRFLQRNRLIAAASI 270 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEI 279 +V+EA RSGSL TA A GR + A+PGP+ + S G H LI+ A+ VT P+++ Sbjct: 271 ATIVLEAGWRSGSLNTAGHAAALGRPLGAVPGPVTSAASAGCHRLIRDYDAVCVTNPDQM 330 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVAL---------------PFPELLANVG-DEVTP 323 E DA + S ++ LL + Sbjct: 331 AELAPLDRAPETDATMTTPESQPPTNLPPESSAPKVDADSPPSTETTRLLDALSVRSART 390 Query: 324 VDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 D +A R+G + V L LEL G + G+ Sbjct: 391 ADDIASRSGLALATVRAHLGLLELDGRVVESERGW 425 >UniRef50_A4A932 SMF protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A932_9GAMM Length = 375 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 120/377 (31%), Positives = 175/377 (46%), Gaps = 34/377 (9%) Query: 1 MVDTEIWLRLM----SISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M + + L I L G + + + + Q + Q + Sbjct: 4 MTREQFQILLSWSGARIQGLGG-----LLREYSSPDLLFSADWQSEPVKE-QLSTLPNAT 57 Query: 57 RKSIESSLCWLEQPNHH-------------LIPADSEFYPPQLLATTDYPGALFVEGELH 103 + + + + N IP +E YP L A D P LF +G+ Sbjct: 58 QSMLLRARKNWPRRNPRGYSSGSDPGGSQAFIPLGAEEYPDALYAIPDPPPWLFCQGDPA 117 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +A+VGSR S G R R LA G TI+SGLA GID AH+ AL+ G + Sbjct: 118 CLAQPAVAIVGSRRASHGGLRAAREIAGRLAAAGYTISSGLALGIDAAAHRGALET-GRT 176 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVL +GL P RH LAA + G +VSE P VPP + FPRRNRIISGL++ + Sbjct: 177 VAVLASGLEQASPLRHRALAAEIAAS-GCVVSELPGPVPPSKHQFPRRNRIISGLTQATI 235 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +VEAAL SGSL TA ALEQGREV+ LP I + G LI+ GA +T +++ Sbjct: 236 IVEAALPSGSLHTAAAALEQGREVYTLPWSIFHEQGAGCRRLIRDGATPITAMDDLSALF 295 Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLL 343 +P++ P +L +GD+ + + + VP+++ L Sbjct: 296 PGVAP---------VAAPEEIAPTGPAARILRLLGDDGLSLRALHDAMDMSVPDLLALLS 346 Query: 344 ELELAGWIAAVPGGYVR 360 +LE+ GW++++ G Y R Sbjct: 347 DLEVQGWLSSIDGRYCR 363 >UniRef50_D1UAQ9 DNA protecting protein DprA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAQ9_9DELT Length = 439 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 109/310 (35%), Positives = 141/310 (45%), Gaps = 7/310 (2%) Query: 1 MV---DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSF 55 M + L L L + +A A+ + Sbjct: 1 MDLQKEFFACLALRHTPRLGPKVWKPLLSHYGSAFEAVREAASWPADVAPRSMARACKAE 60 Query: 56 -PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R E + +I +P L D P L+ G+L L + +AVVG Sbjct: 61 VWRDKAEEEYRAAIRAGMTVITWFDVRFPDALREIEDPPCLLYASGDLTLLKNPGVAVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R + G L+ G+T+ SGLA GID AH L G SIAVLG GL+ Sbjct: 121 ARECTALGLDAAGRISSQLSRIGITVISGLAMGIDRQAHLGGLSGIGGSIAVLGCGLDVD 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P + + + LE G +V+EF V P A NFP RNRIIS LS GVLV EAA SGSL Sbjct: 181 YPHDNHDVRRA-LETRGLVVTEFGPGVTPRAGNFPFRNRIISALSLGVLVAEAAHNSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TAR A EQGREVFALPGP+G P G H LIKQGA LV E+I+E L++ Sbjct: 240 ITARLAGEQGREVFALPGPLGQPTFTGCHRLIKQGAALVESAEDIVEILRYDFARELAHI 299 Query: 295 ENSFYSPDQQ 304 + + Sbjct: 300 PDPEPVAEAD 309 >UniRef50_A3YCI7 Predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Marinomonas sp. MED121 RepID=A3YCI7_9GAMM Length = 446 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 114/425 (26%), Positives = 178/425 (41%), Gaps = 68/425 (16%) Query: 4 TEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 + WL L I + + R+ H + + + L R +P + Sbjct: 17 KQDWLTLSFIKGVGPARLDRLFTYIHSLETSQPKIEASKLKETINLELLLRL-KWPLATA 75 Query: 61 ESSLCWLE---------------------QPNHHLIPADSEFYPPQLLATTDYPGALFVE 99 + ++ +L+ P HHL+ YP +L P L+V Sbjct: 76 QEAISYLQDGRVCDRLSEQLSSTQTWLDVSPQHHLLMRTERQYPDELRQIDVAPIFLYVT 135 Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L AL + +LA+VG+R S YG + + + G+ + SG A GID AH+ AL Sbjct: 136 GNLKALETKKLAMVGARKASQYGLETAYKLAQQIGSLGIGLVSGGAIGIDSAAHQGALAA 195 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQG-GALVSEFPLDVPPLAYNFPRRNRIISGL 218 G +I V+G+GL +P+ + L +LE G L+SE+PL A FP RNRIISGL Sbjct: 196 AGSTIVVMGSGLLHPYPKSNQALFNRILETNSGCLMSEYPLHTKVQARLFPARNRIISGL 255 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEE 278 S GV+VVEA +SGSL++A AL+ R+VFA+PG I + S+ LIKQGA L+T+ E+ Sbjct: 256 SLGVIVVEAGFKSGSLISANYALQHNRDVFAVPGRITDKSSDACLDLIKQGAKLITQVED 315 Query: 279 ILENLQFGL----------------------------------HWLPDAPENSFYSPDQQ 304 ++ + D Sbjct: 316 VINEFSQLEIMSKLSPLIPHDLKMKKKINVYPRLQEAQNNDVSRETQVEIQKIPMLYDPN 375 Query: 305 DVALPFPELLANVGDEVTPVD--------VVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 +++ +L + + + D + G + EV+ ++LEL I + Sbjct: 376 NMSESAIMVLNRIDEMLLEPDGKNEFELNQLVSMTGLAIDEVMQTCMQLELEELIDPLMT 435 Query: 357 GYVRL 361 GY R Sbjct: 436 GYARR 440 >UniRef50_D2LSJ0 DNA protecting protein DprA n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSJ0_BACS4 Length = 289 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 150/289 (51%), Gaps = 7/289 (2%) Query: 1 MVD-TEIWLRLMSISSLYGDDMVRIAH---WVAKQSHIDAVVL-QQTGLTLRQAQRFLSF 55 M E L L + +I+ S ++ L +Q + L++A++ + Sbjct: 1 MNKMKENLLLLHYCCHGNYHLVKKISTINPTFLSLSTLEEKHLIEQLKIPLKRARQIIYL 60 Query: 56 PRK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 R SIE + N H + + YP L D P L+ +G L + L+VVG Sbjct: 61 LRNVSIEKLKEEYKNKNIHYVTIFDDDYPKLLKEIFDPPWILYYQGNSQYLSNTCLSVVG 120 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S R E + G+TI SGLA GID +AH+ ++ G +IAVLG GL+ + Sbjct: 121 TRHPSEIVYRELTEILEPVVKSGITIVSGLAIGIDSMAHELTMKKKGRTIAVLGYGLDWV 180 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P+ + +L + Q +++E+P V P + FP RNRIISG SK VVEA +SGSL Sbjct: 181 YPKSNEQLLNDIKHQH-LVLTEYPPYVKPQRWQFPERNRIISGFSKATFVVEAQDKSGSL 239 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +TA A++Q R++FALPG I S G + LI+ GA ++ + ++ILE Sbjct: 240 ITADLAVQQNRDIFALPGRIFEVTSVGTNKLIQDGAKMILQAKDILEEY 288 >UniRef50_UPI0001B58578 DNA processing chain A n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58578 Length = 390 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 103/379 (27%), Positives = 164/379 (43%), Gaps = 21/379 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-IE 61 + L+ ++ ++ + + V + + + + E Sbjct: 15 ERLARAYLLGVAEPPAPHLLEFVGVRGPVAAAERVRAGDC--PEKVLRETAARRESTIAE 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQ-LLAT----------TDYPGALFVEGE--LHALHSF 108 L + L+ + +P LL+ P L+V GE L + Sbjct: 73 QDLEAAAKVGARLVVPEDHEWPAWPLLSLAVASGNGVKNVAAPLGLWVRGEASLAEVADR 132 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +AVVG+R + YG LATR V + SG A GID AH+ AL GV++A+LG Sbjct: 133 AVAVVGARMATEYGLHNALEIGHALATRQVPVFSGAALGIDAAAHRGALSGGGVTVALLG 192 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 ++ +P ++ L ++ +GGA+VSE+ PP + F RNR+I+GL+ G +VVEA Sbjct: 193 CAVDYSYPVGNSGLLDRIVAEGGAIVSEYAPKTPPARHRFLVRNRLIAGLTDGTVVVEAG 252 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGL 287 +RSG+ TA A G+ V ALPG + + S G H LI+ A LVT +E+LE + Sbjct: 253 IRSGARNTATIAGALGKVVMALPGSVHSGSSAGCHALIRDCKATLVTSVDEVLETVGRFG 312 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLAN-VGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P A ++ + + + VAE AG PV V L LE Sbjct: 313 TAAPSA---EPNRRPTDNLGPEASRVYDALLPRAGRAPEEVAESAGVPVSRVRALLPALE 369 Query: 347 LAGWIAAVPGGYVRLRRAC 365 + G+ G+ ++ R Sbjct: 370 VDGFAVRGETGWRQIVRTA 388 >UniRef50_C7XU50 DNA protecting protein DprA n=2 Tax=Lactobacillus RepID=C7XU50_9LACO Length = 293 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 144/291 (49%), Gaps = 14/291 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-----QQTGLTLRQAQRFLSF 55 M E ++L L R+ + + + + +RFLS Sbjct: 1 MQPKEFLIKLNVCRGLGIISKYRLWEI---AAERYEFDDMVTITRIANINGKVRERFLSA 57 Query: 56 PRKSIESSLCWLEQPNHH--LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 Q N LI YP L P L+ G H L S LAVV Sbjct: 58 WSS---QETETAYQRNCQMPLITIVDALYPELLKRIYCPPLVLYFMGNRHLLKSSCLAVV 114 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + Y + + + R +T+ SGLARG+DG++H+ LQ G +IAV+GNGLN Sbjct: 115 GARQMTSYARQSLQQLLPPVIQRHITVVSGLARGVDGLSHEITLQHGGRTIAVVGNGLNR 174 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 I+P H RL + ++ G L+SE+PLD P L ++F RNRII+GL+ L+VEA RSGS Sbjct: 175 IYPPEHDRLQRQI-KRHGLLISEYPLDTPSLPHHFVERNRIIAGLADACLIVEARKRSGS 233 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 L+TA AL++ R V A+PGPI + S G + LI GA + +ILE L Sbjct: 234 LITANLALKENRNVLAIPGPINSEQSLGCNELIASGARPILNANDILEELG 284 >UniRef50_B8KUG3 DNA protecting protein DprA n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUG3_9GAMM Length = 374 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 121/363 (33%), Positives = 175/363 (48%), Gaps = 7/363 (1%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT--GLTLRQAQRFLSFPRKSI 60 D WLRL+ L + + + A+ GLT L + + Sbjct: 11 DDARWLRLLDPDLLSPLQRRVLFSASLTPAELLALPPGDWPGGLTA-LRSTILGAIERPV 69 Query: 61 ESSLCWLEQPN--HHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 + L P+ HLI YP L +D P ALF G L AL +++VG+R Sbjct: 70 AAGLKCAAAPDAQVHLIALGDSLYPKLLRECSDAPPALFAVGRLAALGDPGVSIVGTRNA 129 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S +G R G F +A+R + + SGLA GID AH+ A+ G +IAVL G++ ++P R Sbjct: 130 SLHGLRTGTEFAAFMASRNIVVVSGLALGIDAAAHRGAIDNGGSTIAVLPTGVDRVYPAR 189 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 H LA ++ E+ GAL+SEF P NFPRRNR ISGL+ G LVVEA SG+L+TA Sbjct: 190 HRALAEAITEK-GALISEFVPGTVPHPGNFPRRNRTISGLTPGTLVVEAGRPSGTLITAT 248 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A +QGREVFA+P + G EG L+ GA L P +++ +L G P Sbjct: 249 AAAQQGREVFAVPWSRYHRGGEGCLALLSDGATLAHSPAQVVHDLAPGYAGQQLLPGVEA 308 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDV-VAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 + D+ + + L + + + + +G + E ++ ELE+AG I G Sbjct: 309 RAGDRSRCSADGEDPLLALIGDGCHIPQVLQRASGLRIHEFQRRITELEIAGLIERDTMG 368 Query: 358 YVR 360 R Sbjct: 369 IRR 371 >UniRef50_D1BJ85 DNA protecting protein DprA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BJ85_SANKS Length = 399 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 104/396 (26%), Positives = 160/396 (40%), Gaps = 35/396 (8%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHI-------------DAVVLQQTGLTL----- 46 I+ + V + V + + Sbjct: 2 LARAAWSRIAEPADRAAGALLRTVGPVDALGWLQSAGTGDDAVRHAVSRLCEVIGVDDRT 61 Query: 47 ---RQAQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFV 98 R A + + L L + L+ + + +P LL D P L+V Sbjct: 62 TVRRLAAAVARWAPRVATTDPARDLDNLARLGGRLVVPEDDEWPTGLLDLGDEGPACLWV 121 Query: 99 EG--ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 G + ++VVG+RA + YG+R L G T SG A GID V H++ Sbjct: 122 RGTGRVDETLRRTVSVVGARASTDYGDRVAGELSVGLVAAGCTTVSGGAYGIDAVVHRST 181 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L V+G ++A L G + ++P +A L +L+ G ++SE P P F RRNR+I+ Sbjct: 182 LAVDGTTVAFLAGGPDRLYPAGNADLLRGVLDGAGLVLSELPPGSVPSRVRFLRRNRLIA 241 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTE 275 + +VVEAA RSGSLVTAR A GR V A+PGP+ GS G H L+++G A+ VT+ Sbjct: 242 ASGRSTVVVEAAWRSGSLVTARLAAGIGRPVGAVPGPVTAAGSAGCHRLLREGVAVCVTD 301 Query: 276 PEEILENLQFGLH-----WLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAE 329 +E+LE A + + + + P + PVD + Sbjct: 302 VDEVLELSGAAGEGLDGIAATGALRDDADTRETDGLDAPGKAAYDALPLRRPVPVDALVR 361 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 +G E++ L LE+ G GG+ R Sbjct: 362 SSGLAPHELMAALGVLEVRGLAVRSTGGWSRAASTG 397 >UniRef50_C8RTT5 DNA processing protein n=2 Tax=Corynebacterium jeikeium RepID=C8RTT5_CORJE Length = 396 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 24/354 (6%) Query: 32 SHIDAVVLQQTG-LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL---- 86 + A + ++ G L+ A + L+ + + +P +L Sbjct: 42 QAVAAALARRGGKLSEALAGSTSQRYEQDPTRDAELASARGWRLVTPEDDEWPAELTASF 101 Query: 87 --------------LATTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFC 130 P AL+V G+ L L + VVG+RA + YGE+ R F Sbjct: 102 VRMADSGADHDSSVRGQAAAPFALWVRGDARLDTLVRRSVTVVGTRAATRYGEQVTRSFA 161 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 LA G ++ SG A GID +AH+AAL ++ V+ GL+ +P+ HA L ++ G Sbjct: 162 GDLADAGFSLISGGAIGIDAIAHRAALDSKMPTVVVMACGLDVSYPKAHANLFEQIVGSG 221 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G L+SE+P PP + F RNR+ + L + LVVEA RSG+L T A + +FA+ Sbjct: 222 GMLISEYPPGTPPARHRFLTRNRLAAALGQATLVVEAPQRSGALNTLNWAEAFVKPIFAV 281 Query: 251 PGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLH--WLPDAPENSFYSPDQQDVA 307 PGP+ + S G I+ A L +++E L L E+ + P + +A Sbjct: 282 PGPVTSHASLGCLDRIRTARATLAVSARDLIEELTPLGEQMALGLGQEDRSFLPSWEHLA 341 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + L + + + E G P V+ L +LE G + ++R+ Sbjct: 342 IIDAAALPSGKGPEGRLPQLVEATGLPARTVIRCLRDLEAMGRLRREADRWIRV 395 >UniRef50_D1R9M9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9M9_9CHLA Length = 320 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 8/299 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVV----LQQTGLTLRQAQRFLSFP 56 M D L I L + + + G + + ++ Sbjct: 1 MDDLIALSILTQIPYLGSVKIRLLIGYFGSALTALEAEVKVIETILGTKSKCLPYWTTWK 60 Query: 57 RKS-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + +L + +L+ + YP QLL +D+P L+V+G+ +A++GS Sbjct: 61 ENDDWKRNLELAAKEGVYLVSYTDQAYPQQLLQISDFPVLLYVKGKWPIEQFKGVAIIGS 120 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S YG F LA G+ + SGLA+G+D AH+ ALQ G ++AV+G+GL+ ++ Sbjct: 121 RQASQYGRELAYSFGMDLAGLGIVVVSGLAKGVDTAAHQGALQT-GKTLAVIGSGLSHLY 179 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + LA L+E+ GA+++E+P+ PP NFP+RNRI+SGL++ V+++EA + SG+++ Sbjct: 180 PYENRDLA-RLIEREGAVITEYPMLTPPNRQNFPQRNRIVSGLAEAVVLIEAPVVSGAML 238 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 T R + QG+++ +PG G H LI++G A V ++I+ + GL Sbjct: 239 TMRKGILQGKKLLVIPGRANEDSFSGNHLLIEEGKAHPVKSAKDIMAQVDKGLRSKEQQ 297 >UniRef50_A6LNF2 DNA protecting protein DprA n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LNF2_THEM4 Length = 264 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 90/252 (35%), Positives = 144/252 (57%), Gaps = 11/252 (4%) Query: 37 VVLQQTGLTLRQAQRFLSFPRKSIESSL-----CWLEQPNHHLIPADSEFYPPQLLATTD 91 + G +L++ ++ L+ ++ + L WL + + L+ E YP L + Sbjct: 6 AIWHYLGHSLKEIRKKLALVKQVEKDELYFKLKSWLSKEGNFLVTYFDEDYPESLKNIWN 65 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF +G L A+VG+R + YG + F + L++ I SG+ARGID Sbjct: 66 PPVVLFGKGNKELLSKKSFAIVGTRLPTEYGRKVAYSFSKRLSSY-FVIVSGMARGIDAF 124 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AHK A + +IAVLGNG++ +P+ + L ++ + G +VSE+ P NF R Sbjct: 125 AHKNARE----TIAVLGNGVDYCYPKENRELYLKII-KEGCVVSEYLPWERPRRDNFRAR 179 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NRII+G+S+GVL+VE L+SG+++TA AL+ G++VF +PG I + S+ P++LIK GA Sbjct: 180 NRIIAGISEGVLIVEGKLKSGTMITANYALDFGKDVFCVPGNIYSENSQTPNFLIKNGAF 239 Query: 272 LVTEPEEILENL 283 LVT P++I+E Sbjct: 240 LVTNPDDIVEYY 251 >UniRef50_C1A4B8 Putative DNA processing chain A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4B8_GEMAT Length = 348 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 22/358 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + L L ++ + + + + A + RQ+ Sbjct: 7 EAFACLALQTLPKMGDVSVRGLVEAHGSANAALASLPPAVVAAARQSAASSV-------- 58 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 + H++ E YP +L D P LF G + +A+VG+R S YG Sbjct: 59 --QLATRTGAHIVALPDEHYPARLRELRDAPAVLFARGSVDIAAPPAVAIVGTRTASGYG 116 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 R R A G+++ SGLARGIDG AH+AAL G ++AVLG G++ +P+ H L Sbjct: 117 LRVARSIATACARAGISVVSGLARGIDGAAHEAALAAGGRTVAVLGTGIDITYPKSHRLL 176 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + G ++SE A FPRRNR+I+ L+ +VVEA SG+L+TA A+E Sbjct: 177 QERI-AHEGLVLSEQTPGDAGHAGTFPRRNRLIAALADVTVVVEAGEGSGALITADHAVE 235 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 GR V +P I + G + L+K A + P+++L L + Sbjct: 236 LGRTVACVPNAIDVATARGSNALLKAHAEPILSPDDVLRLLD-----------MTPSPTQ 284 Query: 303 QQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + V VA+ G + L LE+ G + G +R Sbjct: 285 GPALDGVSARCWHAVQQGALTPVEVAQHTGLSTRDATAVLALLEIDGLLVFDTSGRIR 342 >UniRef50_C6VQH8 DNA processing protein n=3 Tax=Lactobacillus plantarum RepID=C6VQH8_LACPJ Length = 288 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 146/289 (50%), Gaps = 7/289 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ---TGLTLRQAQRFLSFPR 57 M + +RL + MVR+ + + + LT Q RF + + Sbjct: 1 MQLRSLLIRLHLAHGIGYAGMVRVLQHCRQVQTVVTDPRRLGKLAHLTASQQGRFTADWQ 60 Query: 58 KSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + L Q + + + YPP LL P LF+ G+ L + QLAVVG+R Sbjct: 61 SMAFQQRLKRHAQLDI--LTILDDDYPPALLEAYQPPLVLFLRGQRALLTTRQLAVVGAR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y ER LAT +TI SGLA+G DG AH+ AL+ N +I V+G GL+ +P Sbjct: 119 QATSYAERVTTQLLAPLATAKLTIVSGLAKGADGFAHRTALRFNLPTIGVIGTGLDISYP 178 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 R+H L + Q G L+SE+PL V P Y+F RNRII+GL + V+VVEA SGSL+T Sbjct: 179 RQHRDLQQQI-SQVGLLISEYPLGVGPEPYHFVARNRIIAGLCQTVIVVEAQAHSGSLIT 237 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 A +L+ R V A+PGPI P S G + LI GA V I+E Sbjct: 238 ANISLQNNRNVLAVPGPIDAPFSVGCNQLIVAGAKPVLNSRHIIEEFLP 286 >UniRef50_C2KRF3 DNA-binding/uptake protein n=2 Tax=Mobiluncus mulieris RepID=C2KRF3_9ACTO Length = 462 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 98/433 (22%), Positives = 165/433 (38%), Gaps = 74/433 (17%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV--------------------VLQQTG 43 +++ + + ++ + Sbjct: 31 RWARAAWTALADPGDVTAGNLVEFFGALEALERLMRLATHEVEPDEDAIRDTFKPFVLPA 90 Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGEL 102 + A L + S++ L WL + + + +P L + P AL+V G+ Sbjct: 91 SVAKIAGWALRWRVVSVDQELEWLWENDGSFLIPGDPQWPRTLDTMGANRPLALWVRGDP 150 Query: 103 HALHSFQ---LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 A+ + +A+VGSR+ + YG LA GV + SG A GID H+ AL Sbjct: 151 AAVQDTETGAVALVGSRSATRYGMSMAGELGYDLAQHGVWVISGGAYGIDAAGHRGALGS 210 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 +G ++ V GL ++P + + +LE GA++SE P P + F RNR+IS LS Sbjct: 211 SGKTLCVQAGGLRELYPAMNTSMFDQILET-GAIISEQPWSYRPQRHLFLSRNRLISALS 269 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 + V+VVEA RSG++ TA EQGR V A+PG + + S G H LI++GA LVT ++ Sbjct: 270 QVVVVVEAGTRSGAMSTANHGAEQGRTVAAVPGLVTSGASAGCHQLIREGATLVTCAGDV 329 Query: 280 LENLQFGLHWL------------------------------------------------P 291 LE +Q + Sbjct: 330 LELMQPFVAPDEKPIGACSTAGSLGEGAGHSAENVTLSTAAAKESSEAGHSAPAAGSNAN 389 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVT-PVDVVAERAGQPVPEVVTQLLELELAGW 350 + + S S + ++ + + + +A++AG + + +L L L G Sbjct: 390 PSTKLSADSLFSPFLKPETIKVFDALPKRMWGSPENIAQKAGLGISATLGELGLLVLDGK 449 Query: 351 IAAVPGGYVRLRR 363 G Y R + Sbjct: 450 AETRDGKYRRPQP 462 >UniRef50_A4KPU6 DNA uptake protein, SMF family n=3 Tax=Francisella tularensis RepID=A4KPU6_FRATU Length = 245 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 1/245 (0%) Query: 95 ALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 L+ G L+S QLA+VG+R HS YG+ C L +TI SGLA GID +AHK Sbjct: 2 ILYCSGNSDLLNSQQLAIVGARNHSSYGKNVTAKLCADLKDSKLTIISGLAYGIDTLAHK 61 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRI 214 A+ N +IAV+G G++ ++P + L ++ G ++SEFPL PL YNFP+RNRI Sbjct: 62 YAIDNNLSTIAVVGTGVDVVYPSSNRELYNKIINTNGLIISEFPLGTGPLLYNFPQRNRI 121 Query: 215 ISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVT 274 ISGLSKGV+VVEAA +SGSL+TA LEQ +EVFA+PG I + S+G + LIKQGA LV Sbjct: 122 ISGLSKGVVVVEAASKSGSLITAELVLEQNKEVFAIPGSIFSTTSQGCNQLIKQGAKLVC 181 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 +ILE + + + ++ + + +L ++ E+T +D + ++ P Sbjct: 182 NVNDILEEIDIASNTSQTSSTDNQVNK-IISLNESERIILGSIDRELTTIDKIIIKSKLP 240 Query: 335 VPEVV 339 +V Sbjct: 241 YNQVT 245 >UniRef50_D0LAN6 DNA protecting protein DprA n=9 Tax=Corynebacterineae RepID=D0LAN6_GORB4 Length = 374 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 155/373 (41%), Gaps = 20/373 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL--SFPRKSIE 61 W L ++ ++ + + AV ++ R+ + Sbjct: 7 RRAWAYLARVAEPPAAPVIDMIAALGVSEAAAAVRRRKVPDEHREVLAITASRADTDQAQ 66 Query: 62 SSLCWLEQPNHHLIPADSEFYPP-QLLATTDY--------PGALFVEG--ELHALHSFQL 110 + L E+ L+ + +P L+A P AL+V G L + + + Sbjct: 67 ADLDTAERIGARLVTPADDEWPAWSLMALGQADTAARGGVPLALWVRGPARLDDIAAACV 126 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VGSRA S YGE L G + SG A GIDG AH+AAL G + AV+ G Sbjct: 127 ALVGSRAASSYGEHVTATVASGLCDNGFAVLSGGAFGIDGAAHRAALGSGGTTAAVMACG 186 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P HA+L + + GA++SE+P + F RNR+++ L +VVEA R Sbjct: 187 IDRDYPAAHAQLLREI-ARVGAVISEYPPGTTAAKHRFLTRNRLVAALGGATVVVEAGRR 245 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 SG+ TA A + GR + A+PGP+ + S G H +I A LV + ++ + Sbjct: 246 SGAANTAAWARKLGRPLGAVPGPVTSVTSVGCHQMIADQLATLVVDAAAVIR----LVRP 301 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELA 348 + + ++ + + + +A AG +P V T L LE+ Sbjct: 302 DGEGVMTGGRARATDALSAEQKRVHDALPARGAVTIGEIAFSAGLELPAVRTALARLEVT 361 Query: 349 GWIAAVPGGYVRL 361 G I + + Sbjct: 362 GLIDGDGARWWLV 374 >UniRef50_C5RBD6 DNA protecting protein DprA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD6_WEIPA Length = 288 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 96/283 (33%), Positives = 141/283 (49%), Gaps = 5/283 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR---FLSFPR 57 M + L L+ I L RI ++ ++ + + QQ + Q ++ Sbjct: 1 MAQRDFLLWLLMIPGLSIKGRYRIWIYLK-ENKLSKLSWQQILTISKMRQSQRNEATYWF 59 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 K + + W + + I YP L D P LF +G+L L +A+VGSR Sbjct: 60 KEMNWQVEWHKLQDQTYIAICDAAYPITLSECIDAPICLFYKGDLSLLVQPLVAIVGSRQ 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + + L G+T SGLA GID + H+ L+ NG +IA++G G + +P+ Sbjct: 120 ATAYGISVLKSWIPGLTAAGLTTVSGLAAGIDELTHRETLKANGQTIAIIGTGFDYAYPK 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L ++ Q G L+SE+ P ++FP RNRIISGL + LV+EA RSGSL+TA Sbjct: 180 HCEDLQNTI-SQLGLLLSEYLPWQGPKRHHFPERNRIISGLCQVCLVIEAKKRSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 ALEQ R V ALPG I S G + LI GA V ++I+ Sbjct: 239 MLALEQNRTVMALPGRIDGQYSVGTNELILAGATPVLSVDQIV 281 >UniRef50_Q9KA22 DNA processing protein (Smf family) n=1 Tax=Bacillus halodurans RepID=Q9KA22_BACHD Length = 302 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 149/291 (51%), Gaps = 10/291 (3%) Query: 1 MVDTEIWL-RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSF 55 M L L S+ S+ + +I H+ + I Q GL+ ++A+ Sbjct: 1 MSSRAKRLTHLASLPSMSRALLKKILHFDETLTVIFKQSHVQLSETYGLSTKKARHLYEH 60 Query: 56 PRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVV 113 R+ + E+ + + YP L D P LF G ++ L+ +LA+V Sbjct: 61 LRRVSTDFWSEYYEKKQIVPVTIFDKGYPNLLKEIYDPPFVLFCRGRMNTLYSEKRLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S G + L L G I SG A G+D AH+ ++ G +IAVL +G + Sbjct: 121 GTRKTSTTGLKSLELLIPPLLQDGWVIVSGFAAGVDIHAHQLTVKNGGQTIAVLAHGHDN 180 Query: 174 IHPRRHARLAA-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P H A ++ Q ++SE+P V P + FP RNRIISGL G +V+EA +SG Sbjct: 181 LYPAAHRPFAEHEMVSQ--LMISEYPPYVKPRPWQFPERNRIISGLCAGTVVIEAKEKSG 238 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 SL+TA ALEQGR+VFA+PG I N + G + LI+QGA L+ ++I+E L Sbjct: 239 SLITADQALEQGRDVFAVPGAITNQKAAGTNQLIQQGAKLIQRADDIIEEL 289 >UniRef50_C9B199 DNA processing SMF protein n=4 Tax=Enterococcus RepID=C9B199_ENTCA Length = 292 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 4/282 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLR-QAQRFLSFPRKSIESSLC 65 ++L + +I + ++ + + + + Q + + + Sbjct: 13 LIKLYYCQGIGLQGCWKIIWHWLETKEMNCSLEEMIAIGVLPQHRAVFRRSWERLTDE-H 71 Query: 66 WLEQPNHH-LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGER 124 ++ + S YP L D P LF EG L L + + VG+R S Y + Sbjct: 72 IAQKMGAQNYLTFFSAEYPMLLRQIADPPLMLFYEGNLQLLQTTMIGFVGARTASLYARK 131 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 L T TI SGLA G+D AH++A++ G +IAV+ +G++ +P RL Sbjct: 132 VCEKLIPPLVTENYTIVSGLANGVDSFAHESAIRNRGQTIAVIASGMDHCYPSSSYRLFQ 191 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 + ++ ++SE+P D P Y+FP RNRII+G+SKGV V+EA RSGSL+TA+ A+E G Sbjct: 192 QIRQEH-LVLSEYPHDTKPQRYHFPLRNRIIAGISKGVCVIEAKERSGSLITAQLAMENG 250 Query: 245 REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 REVFA+PG + + S+G H LI+ GA +IL+ L F Sbjct: 251 REVFAVPGEMISDQSKGCHRLIQDGAKCTISVSDILQELAFF 292 >UniRef50_C0XSA7 DNA processing protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSA7_9CORY Length = 391 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 107/386 (27%), Positives = 162/386 (41%), Gaps = 30/386 (7%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA-VVLQQTGLTLRQAQRFLSFPRKS 59 M E W L + + + I A V + + L + + Sbjct: 1 MSSPESWAYLSRVIEGPSRHLQALLAAGRDADEIAAGVRARASWLGALARETESRYTFNQ 60 Query: 60 IESSLCWLEQPNHHLIPADSEFYPP----------------QLLATTD---YPGALFVEG 100 + L L+ D + +P L P AL+V G Sbjct: 61 PQRDLEAAHGAGFSLVTPDDQGWPAEAIADAFVTGVAVSQANLAEAKPDGVAPHALWVSG 120 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 L+ L + +A+VG+RA + YG LA G T+ SG A GID AH +AL Sbjct: 121 ETNLNQLFARSVAIVGTRASTAYGHHATADLVTGLAGFGYTVVSGGALGIDSTAHDSALA 180 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 ++AV G +PRR+A L + A+++E+P V P + F RNR+++GL Sbjct: 181 AGAPTVAVAACGPGVTYPRRNAELFRRVT----AVITEYPPGVTPDRHRFLTRNRLVAGL 236 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPE 277 S+G ++VEAA RSG+L T A R V A+PGPI PGS G + I++G A +V + Sbjct: 237 SQGSVIVEAAFRSGALNTLTWAHYFNRRVMAVPGPILGPGSLGTNLAIQEGRADMVLNAK 296 Query: 278 EILENLQFGLHWLPDAP-ENSFYSPDQQDVALPFPELLAN--VGDEVTPVDVVAERAGQP 334 +I L PDA E F + D Q ++ + + + +A R+G Sbjct: 297 QIHALLNRVGEVDPDAQLELDFAADDIQRLSRNELRVYDAVPLATRGATAEDIATRSGLG 356 Query: 335 VPEVVTQLLELELAGWIAAVPGGYVR 360 V V L+ELE G + + R Sbjct: 357 VALTVHILVELEARGLVVRTGRQWRR 382 >UniRef50_C8XBV0 DNA protecting protein DprA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBV0_NAKMY Length = 423 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 147/403 (36%), Gaps = 42/403 (10%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP------ 56 + L+ +VR VL + + Sbjct: 15 ERVALAGLLRACEPPSAALVRYVQGHG-PEAAWQAVLARRAPRAVLSATAARVDGVDPAV 73 Query: 57 -RKSIESSLCWLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEGELHA 104 E+ L + LI + +P + + P AL+V G Sbjct: 74 LVARAEADLVAAARVGARLIGPPDDQWPGAAVSAFAGAMARGVRGAGPPLALYVRGRPLT 133 Query: 105 -LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV---- 159 L + VVGSRA S YG R LA G + SG A GID AH++ALQV Sbjct: 134 GLPDRAVTVVGSRASSPYGTRVAGEMAYELARAGSVVVSGAAFGIDTAAHRSALQVVRSA 193 Query: 160 ----NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 V++AVL G++ +P + L + + G++VSE+P P + F RNR+I Sbjct: 194 PDEPRSVTVAVLACGIDRAYPEANRDLLDLI-ARHGSVVSEYPPGTVPARHRFLVRNRLI 252 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVT 274 + +VVEA RSG+L TA A + GR V A+PGP+ + S G H L+ A LVT Sbjct: 253 AAFGAATVVVEAGRRSGTLSTAAAAEQLGRMVMAVPGPVTSAMSVGCHLLLADRFAQLVT 312 Query: 275 EPEEILENLQ-----------FGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVT 322 +++L L A + + T Sbjct: 313 GADDVLTALGRTGRTGRLESRAVPGPHDGAVPGEDPRHPTDGLEPTNARVYDAFPTRGST 372 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 V + +G P V+ L L+L G + R+R Sbjct: 373 SVHELVVESGLPAATVMGALAVLQLHGLADQDGPQWRRVRPDR 415 >UniRef50_C8PTI1 Smf protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTI1_9SPIO Length = 318 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 152/298 (51%), Gaps = 5/298 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 ++++ L S L G + + +A + + + ++++ R S+ + +E Sbjct: 9 EKRKLYIALSYCSFLKGSERLLLARTLDTLQALTVSSIDTLSRIVQRSFRTRSYKPELLE 68 Query: 62 SSLCWLEQP----NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 ++ E ++ D +PP L D P L+ G L + A+VG+R Sbjct: 69 QAVEKAESLMKYCRINMTFYDDTDFPPLLREIPDAPFLLYYRGVLPKADTPAAAIVGTRR 128 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + G + G+ + SGLARGID AH+ AL+ G++ AVL GL+ ++P+ Sbjct: 129 PTGNGIKAALQLGTECGHAGIPVISGLARGIDTFAHRGALEGGGLTTAVLACGLDRLYPQ 188 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 +ARLA +LE GG ++SE+ PPLAY FP+RNR+ISGL++ +V+EA +SG+L+TA Sbjct: 189 SNARLAGRILETGGCILSEYAPGEPPLAYRFPQRNRLISGLARATVVIEAPAKSGALITA 248 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL-ENLQFGLHWLPDAP 294 ALEQGR+V G + + G L + GAI V ++L E L +L Sbjct: 249 DFALEQGRDVCIHGGMTDSVQNTGCKKLAEDGAIPVEHAGDLLREWAHPALQYLQREQ 306 >UniRef50_B1HQJ2 Protein smf n=2 Tax=Bacillaceae RepID=B1HQJ2_LYSSC Length = 298 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 160/299 (53%), Gaps = 19/299 (6%) Query: 3 DTEIWLRLMSISSLYGDDMVRIA-----------HWVAKQSHIDAVVLQQTGLTLRQAQR 51 DT+ L L + L + R+ + ++I + + R ++ Sbjct: 6 DTQRLLALHYVYPLPLQKLQRLLSPVNVLNTFEEAHYGEIANILQISAHKALQISRSFRQ 65 Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQL 110 ++ P + + N IP ++P QL + P L+V+G L + Q+ Sbjct: 66 IMTIPFE------EAYTRANIFPIPFYHPYFPAQLFEISSPPTVLYVKGRYSLLTNKKQI 119 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A++GSR + Y +R L L G T+ SGLARG D +AH+A + + G ++AVLG+G Sbjct: 120 AIIGSRKATAYSKRALDLIVPPLVQCGYTVVSGLARGADTMAHRATIDMGGHTMAVLGHG 179 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 N ++PR + LA + +Q L++E+P + P ++FP RNRIISGL++ ++V EAA++ Sbjct: 180 FNYLYPRENQVLAMDMADQQ-LLITEYPPYMKPEKWHFPMRNRIISGLAQALVVTEAAIK 238 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 SG+L+TA ALEQG+++F +PGPI S+G + L+ +GAI V +I+E L + Sbjct: 239 SGTLITAELALEQGKDIFVVPGPIDAAQSKGTNQLLVEGAIPVMNGHQIVETLDLFSNK 297 >UniRef50_D1B6D8 DNA protecting protein DprA n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6D8_THEAS Length = 361 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 152/351 (43%), Gaps = 21/351 (5%) Query: 18 GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWLEQPNHHLIP 76 M R+ V + G R R L ++ Sbjct: 27 WARMGRLPREVISGPAALE----EAGFPRGGWSRVEEAMRTGWARRELDRASSMGIGVLA 82 Query: 77 ADSEFYPPQLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAHSWYGERWGRLFCETLA 134 E YP LL +D P AL+V G Q ++VVG+R S YG + E A Sbjct: 83 LGEEGYPESLLELSDPPAALYVRGTRGIPLRPQGAVSVVGTRRASTYGLKVAMAVGERCA 142 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + SG A GIDG AH+ AL G++ AVLGNG++ + P H L L+ + G LV Sbjct: 143 GSSLWTVSGGAMGIDGAAHQGALSKGGLTCAVLGNGVDVVFPADHRELFE-LVARDGCLV 201 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE+PL + FP RNRII+ LS ++VVEA RSG+L+TA AL+ GREV+A+PG I Sbjct: 202 SEYPLGTKGSQWRFPMRNRIIAALSARLVVVEAPERSGALITASRALDLGREVWAVPGKI 261 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 G G + LI GA+ + + L L E+ S + +++ Sbjct: 262 GEAQCRGSNLLIYDGAMPLVD-----------LDLLFPPGEDRGSSRQVDPLEGAILQVM 310 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 A + VD +A +++++L LE G + G L Sbjct: 311 A--SEGDWTVDKLALECKIGAADLLSRLAILEARGLVYRSSPGRYSLSPGA 359 >UniRef50_UPI0001850E8F Smf family DNA processing protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E8F Length = 322 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 8/291 (2%) Query: 1 MVD-TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL----TLRQAQRFLSF 55 M + + L + L + + S + + T + + Sbjct: 1 MEESKRNLILLHHSNELSWKGIGLLLKSDPYLSQLKTYSPEDLQSILQTTPQHIRSIYDH 60 Query: 56 PRKSI-ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVV 113 ES L + + + YP L + P L+ +G ++ LH + LA+V Sbjct: 61 IHHFPLESFLEKYKAYSIQISTLYDSSYPSLLRSCHKAPWVLYGKGNMNLLHTAKSLAIV 120 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 GSR + YG + L + I SGLA GID H+ L G +IAVLGNG+ Sbjct: 121 GSRKGNDYGYEVVNSWVPHLIKQDFVIVSGLASGIDSFVHERTLNYEGSTIAVLGNGILQ 180 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P +++ + + E+ G L+SE+P P + FP RNRIISG+++G LVV+A+ RSGS Sbjct: 181 CYPLKNSEIQKRIGEK-GLLLSEYPPFRKPERWQFPERNRIISGITRGTLVVQASKRSGS 239 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 +TA ALE+GREVFA+PG I +P S G + LI+ GA LV E+I+E ++ Sbjct: 240 FITAERALEEGREVFAVPGNIFSPLSAGTNSLIQLGAKLVLSTEDIIEEIR 290 >UniRef50_A8M692 DNA protecting protein DprA n=8 Tax=Actinomycetales RepID=A8M692_SALAI Length = 452 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 95/383 (24%), Positives = 153/383 (39%), Gaps = 31/383 (8%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-- 59 D + L ++ + + + +L+ G + ++ + Sbjct: 37 TDRLARVALTWLTEPGNRSVFELVESHGAVDTL--ALLRDGGAPGETLRETVAARLSAGN 94 Query: 60 ----IESSLCWLEQPNHHLIPADSEFYPPQLLATTD---------------YPGALFVEG 100 ++ ++ L+ + +P + P +V G Sbjct: 95 PLAVAAQAMERADRLGARLVTPADDEWPLPVADLRRLVLTGSTRRVDRETAPPLCFWVRG 154 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 L +A+VG+RA + YG LA RG T+ SG A GID AH+ AL Sbjct: 155 GQPLAETLDRSVAMVGARAATEYGVHTSTELAYGLAERGWTVVSGGAFGIDAAAHRGALT 214 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 G++++VL GL+ +P +A L + + G LVSE+ PL F RNR+I+ Sbjct: 215 AGGLTVSVLACGLDRPYPMGNAALFDRIADT-GLLVSEWMPGADPLRPRFLIRNRVIAAA 273 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ--GAILVTEP 276 ++G ++VEAA RSG+ T AL R V +PGP+ + S G H L++Q A LV Sbjct: 274 TRGSVLVEAAARSGATQTMHRALAIARPVMVVPGPVTSVMSIGSHELLRQYPEARLVAST 333 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTP-VDVVAERAGQPV 335 +LE + L DQ + +L + VD VA R+G V Sbjct: 334 AHVLEEVGRIGVDLAPLVRGPTRVRDQ--LDDESATVLEALPRRGVRGVDDVAARSGVAV 391 Query: 336 PEVVTQLLELELAGWIAAVPGGY 358 + +L LE G + GY Sbjct: 392 RTALRKLALLEELGLVIQRDDGY 414 >UniRef50_Q10817 Uncharacterized protein Rv2896c/MT2964 n=21 Tax=Mycobacterium RepID=Y2896_MYCTU Length = 389 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 105/372 (28%), Positives = 159/372 (42%), Gaps = 19/372 (5%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL 64 W L ++ + + V D V Q G L Sbjct: 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVG-NELAQHTGARREIDRAADDL 65 Query: 65 CWLEQPNHHLIPADSEFYP-----------PQLLATTDYPGALFVEG--ELHALHSFQLA 111 L + LI D + +P + P L+ G L + A Sbjct: 66 ELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAA 125 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVG+RA + YGE LA R V++ SG A GIDG AH+AAL G+++AVL G Sbjct: 126 VVGTRAATAYGEHVAADLAAGLAERDVSVVSGGAYGIDGAAHRAALDSEGITVAVLAGGF 185 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P H+ L + Q G L +E+P V P + F RNR+++ +++ +VVEA LRS Sbjct: 186 DIPYPAGHSALLHRI-AQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRS 244 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLP 291 G+ TA A GR V A+PGP+ + S G H L++ GA LVT ++I+E + Sbjct: 245 GAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAG 304 Query: 292 DAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGW 350 D P ++ ++ + G +D +A +G +V+ L LE+AG Sbjct: 305 DEPRPGAA---LDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGL 361 Query: 351 IAAVPGGYVRLR 362 G + LR Sbjct: 362 AECRDGRWRILR 373 >UniRef50_D2NTN3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=2 Tax=Rothia mucilaginosa RepID=D2NTN3_9MICC Length = 613 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 15/328 (4%) Query: 51 RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEGELHAL---- 105 R+ +++ + L+ +PPQL P L+ G+ L Sbjct: 284 RWNRRMERTLNAEAHMAATCGAWLVTPADPLWPPQLNDLGPARPYGLWCRGDSRHLLDVA 343 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG---V 162 + +A+VGSR S YG LA RG T+ SG A GID AH+AAL Sbjct: 344 SAPSVALVGSRDPSIYGTEATTHLAAELARRGYTVISGGAMGIDIAAHRAALTQQSSDLP 403 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IA + GL+ ++P +++ ++++ G ++SE + P + F RNR+I+ L++ Sbjct: 404 TIAFMAGGLDRLYPAQNSDALNMIVDR-GLIMSEVSVGNTPTRWRFLERNRLIAALARHT 462 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 +VVEA RSG+L TAR A+E GR ++A+PG I +P S G + L++ G A +TE +ILE Sbjct: 463 IVVEARWRSGALNTARHAMEIGRTLWAVPGQINSPNSVGTNRLLRDGLAQTLTEAADILE 522 Query: 282 NLQFGLHWLPDAPE----NSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVP 336 L E + S ++ + ++ VD +A G Sbjct: 523 YDAAAGFELGTEHESEWDQAASSSALDELTERQGRVWDDLSPRSYRGVDEIAAALGLSAR 582 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLRRA 364 +V+ L L G + + ++R A Sbjct: 583 DVMADLFHLGRCGLAESSGTSWRKVRPA 610 >UniRef50_P39813 Protein smf n=5 Tax=Bacillus RepID=SMF_BACSU Length = 297 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 13/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + L + I+ L + + W + +T Q + + + I Sbjct: 1 MDQAAVCLTICRINQLLSPSL--LLKWWKADPSMSLTSPVLQTVTRDQIKA--AALKNEI 56 Query: 61 ES-------SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 E L + + IP S+ YP L + D P LF +G++ L ++ + Sbjct: 57 EQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGI 116 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + YG++ + + +G I SGLA GIDG++H A+++ G +I V+ G Sbjct: 117 VGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQ 176 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 I+PR + +LA + + L+SE P + P ++FP RNRIISGLS+GV+VV+ +SG Sbjct: 177 HIYPRENLQLADHMAKHH-ILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSG 235 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 SL+TA ALEQGREVFA+PG + +P + GP LI+QGA + E+I E L Sbjct: 236 SLITAYQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELP 287 >UniRef50_Q1WU06 DNA processing protein n=2 Tax=Lactobacillus salivarius RepID=Q1WU06_LACS1 Length = 286 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 151/286 (52%), Gaps = 5/286 (1%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--DAVVLQQTGLTLRQAQRFLSFPRK 58 M + +R S YG + +A+++ + + + ++ L+ ++ +++++ Sbjct: 1 MELRDFLIRAHICSQYYGGSVKNVAYFMNEIQKLPTEEEFIKLLKLSEKKIGKYMAYFLS 60 Query: 59 S-IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + + E YP L + P F G L++ LA+VG+R Sbjct: 61 DGLTKEVEENKNYG-GICTIFDEDYPVLLKEIYNPPLVFFYNGNFSLLNAPTLAIVGARK 119 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 HS Y + + + G+ SGLA+GID + HK L G +I V+G GL+ +PR Sbjct: 120 HSPYAKEVLKKLLPDILDEGIATVSGLAKGIDSLTHKITLSEKGKTIGVIGTGLDRTYPR 179 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L A++ E+ G ++SE+ L PL ++FP RNRIISGL + +LVVEA +SGSL+TA Sbjct: 180 ENFELQANM-EKEGIVLSEYALGQKPLRFHFPARNRIISGLCQSLLVVEARRQSGSLITA 238 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 AL++ R V A+PG I + SEG + LI +GA + E+ILE Sbjct: 239 NMALQENRNVLAVPGNINSILSEGCNELILEGAKPILRAEDILEEF 284 >UniRef50_C9BS90 SMF protein n=12 Tax=Enterococcus faecium RepID=C9BS90_ENTFC Length = 286 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 4/285 (1%) Query: 1 MVDTEI-WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR-FLSFPRK 58 M E L+L + +A+W+ + + + + R + Sbjct: 2 MYQIEENLLKLAYTKGISSQGKWALANWMMQYPYKEIGFEDIIKIGKITKHRELFRKSWQ 61 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 I ++ ++ I YPPQLL T P LF G+L L L+VVG R Sbjct: 62 EIHANWGKIQSKQ-SFITCFDPKYPPQLLHLTYPPIVLFYNGDLSLLSCNMLSVVGGRHT 120 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S ++ + + G I SG A+GID H+AA+ G +IAV+G G+ ++P Sbjct: 121 SALAKKTVYYLLKPVIEAGYVIVSGCAKGIDTYGHQAAISHGGRTIAVIGTGIEQVYPAE 180 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + L ++ L+SE+P P + FP RNRII+ LSKG V EA +SGSL+TA+ Sbjct: 181 NRDL-QEVIANDHLLLSEYPPQSGPKKHCFPMRNRIIAALSKGTCVFEAKKKSGSLITAQ 239 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 AL+ GR VF++PG I S G H LI+ GA+ E+IL Sbjct: 240 QALDLGRTVFSVPGNILTEHSTGCHHLIQDGAVCTVSGEDILAEF 284 >UniRef50_UPI0001C31AB3 DNA protecting protein DprA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB3 Length = 366 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 100/359 (27%), Positives = 142/359 (39%), Gaps = 25/359 (6%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQTGL----TLRQAQRFLSFPRKSIESSL---------C 65 IA A + R+ I Sbjct: 13 RRAWLIARLSGHIERAWAARRPLPAVLSLADDELIAALAGEQRRRIAREYDRFDAALARE 72 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF----QLAVVGSRAHSWY 121 I + YP +L D P L + G +A+VG+R + Y Sbjct: 73 RCVDCGLTAICRCAPHYPQRLRDLPDAPAVLHLLGRADRFEQLIEADGVAIVGARRATPY 132 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G R LA G+T+ SG+A GID AH AL+ +G ++AVL G +P R Sbjct: 133 GIEQARGIARGLAAAGITVVSGMALGIDAAAHTGALEASGSTLAVLAGGAERAYPASKRR 192 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + G +VSE P P + FP RNR I+ L++ +VVEA RSGSL+TA AL Sbjct: 193 LHERIAAS-GVVVSEMPPGTPIRRWAFPARNRTIAALARLTVVVEAGERSGSLITATLAL 251 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR+V A+PG + P + G + LI +GA L+ P+++LE L + Sbjct: 252 DLGRDVAAVPGLVTAPLAAGTNGLIAEGARLIRGPQDVLELLFGADAP------RVPGNA 305 Query: 302 DQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + LL VG V + G PV + L +LEL G + GG Sbjct: 306 VASGLPADLRALLERVGSGQDTVAALTAD-GLPVDAALAGLAQLELRGKVRRTTGGRYA 363 >UniRef50_A7BDE2 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE2_9ACTO Length = 386 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 20/380 (5%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAK--QSHIDAVVLQQTGLTLRQAQRF---- 52 M DTE+W +++ + + L L + R Sbjct: 1 MNDTELWEAAWWSAVAEPADPCARILRQALGDRDARAWLIGSWSAPPLALARHSRIDWHT 60 Query: 53 ------LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHAL 105 I+S L + + +P L + P L+ GEL Sbjct: 61 QWNRWRQRALSVDIDSELTRVAHAGGGFMTPGDPRWPEHLACLGEEEPMGLWFLGELVEA 120 Query: 106 HS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L++VG+RA + G R R +A GVT+ SG A GID AH+ AL G + Sbjct: 121 PRVDRHLSIVGARASTGAGNRCARNMAAFVAAAGVTVVSGGAIGIDIEAHRGALSARGRT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I +L G+ +P H ++++ GGAL+SE P + F RNR+I+ S + Sbjct: 181 ICILAGGVCNPYPACHGGDFRAVIDGGGALISEVAPTARPAKWRFLTRNRLIAAWSGATV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA RSG+L TAR A+E GRE+ A+PG + P S G L + GA ++ + + LE + Sbjct: 241 VVEAGARSGALATARRAMEYGRELGAVPGAVDAPMSVGCLELARNGATIIRDGRDALELV 300 Query: 284 QFGLHWLPDAPENSFYSPD--QQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVT 340 + D + + + V+ + A EV Sbjct: 301 RPVSVDAAQPLFGMPVDDDHGVDALEPTQRRVWEALPRSAPASVEAICVAAALSREEVNY 360 Query: 341 QLLELELAGWIAAVPGGYVR 360 L+EL +AG +A G+ R Sbjct: 361 ALMELSVAGLVAGSTRGWTR 380 >UniRef50_B7IE20 DNA protecting protein DprA n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE20_THEAB Length = 266 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 139/241 (57%), Gaps = 12/241 (4%) Query: 44 LTLRQAQRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + + QR +K IES L WLE + ++ + Y L P LF +G + Sbjct: 24 IKSKDIQR-----KKFIESKLTRWLEFSGNGILTFFDDEYHEYLKNIWKPPVVLFYKGNI 78 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 H L +VVG+R+ + YG+ F + L+ I SG+A GID AHK + Q Sbjct: 79 HLLKKNCFSVVGTRSMTAYGKSITEKFVKKLSDF-FVIVSGMAIGIDTEAHKNSKQ---- 133 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 +IAVLG G++ +P+++ + + + G L+SE+ P + FP RNRII+G+S+GV Sbjct: 134 TIAVLGCGVDICYPKQNKYIYDKI-SKEGCLISEYLPWENPKKHYFPLRNRIIAGISEGV 192 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 LVVE +SG+++TA A++ G+++F +PG I + SEGP++LIK GA VT+P+EIL+ Sbjct: 193 LVVECKKKSGTMITANYAIDFGKDLFTVPGNIFSLNSEGPNFLIKNGAYPVTDPDEILDF 252 Query: 283 L 283 Sbjct: 253 Y 253 >UniRef50_A8VRY7 Chromosome segregation protein SMC n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY7_9BACI Length = 308 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 13/301 (4%) Query: 4 TEIWLRLMSISSLYGDDMVR--------IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 E + L S + + + + + +S V ++ L + Q Sbjct: 8 RERLIHLHYCSGGDSEFVCKVLVKDPELLLMYGWSESEWLRVFPKRRSLAPQVFQGLSKR 67 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVG 114 P I SSL + +I + + YP L D P L+ +G + L + LA+VG Sbjct: 68 PYHLIASSL---SEKGIQVITVEDDAYPKLLKEIYDPPLCLYTKGNVAYLTMASYLAIVG 124 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S Y + L G+ I SG+A G+D AH+ A+ + +IAVL G + + Sbjct: 125 TRWPSGYASQAIDFLMAPLKESGIVIVSGMAEGVDTQAHRKAMSLGLPTIAVLAFGFDHL 184 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +P ++ L A L+ +V+EFP + ++FP+RNR+ISGL + VL+ EA RSGSL Sbjct: 185 YPAKNRDLYAR-LQTDELVVTEFPPYMKAEKWHFPKRNRLISGLCQAVLITEAKKRSGSL 243 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 +TA CA+ Q R+VF++PG I NP SEG + LI+QGA L+ E++L + Sbjct: 244 ITADCAMSQNRDVFSIPGRIDNPVSEGTNRLIQQGAKLILTGEDLLNEFPESESAGKKSK 303 Query: 295 E 295 E Sbjct: 304 E 304 >UniRef50_A6W7V8 DNA protecting protein DprA n=5 Tax=Actinomycetales RepID=A6W7V8_KINRD Length = 395 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 160/372 (43%), Gaps = 21/372 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D ++ + V + ++AV+ G + + Sbjct: 28 DDRLARAAWSRLAEPGDAAAAHLVAEVGAVTALEAVL---AGRGPDRWR--TRSREADPA 82 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTD---------YPGALFVEG--ELHALHSFQL 110 L L+ + +P +L P L+V G L + + Sbjct: 83 GDLAAARAAGGRLVVPGDDEWPGRLEDLDRDAGGERPLGAPFCLWVRGPAHLREVTARSA 142 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+RA + YG+ LA R + SG A GID AH+AAL V GVS+AVL G Sbjct: 143 ALVGARAATAYGQHVTSELAAGLADRRFAVVSGGAFGIDAAAHRAALAVGGVSVAVLACG 202 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ +P +A L A L E+ GALVSE P P + F RNR+I+ L+ G +VVEAA R Sbjct: 203 VDRSYPPGNAALLARLAER-GALVSEVPPGSTPTRWRFLERNRLIAALTSGTVVVEAAWR 261 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHW 289 SG+L TA A R V A+PGP+ +P S G H L+++ GA+ VT +E+ E L Sbjct: 262 SGALSTADRAERLLRPVGAVPGPVTSPASAGCHRLLRERGAVCVTSADEVAELLGELGRE 321 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELA 348 S + + + ++ + AG + V + L LEL+ Sbjct: 322 PAPVR--SVERRAFDGLDRDELRVAECLPRRGGCDLERLVLDAGLELAVVQSVLGRLELS 379 Query: 349 GWIAAVPGGYVR 360 G VPGG+ Sbjct: 380 GIAVRVPGGWRS 391 >UniRef50_Q83MV3 Nucleotide-binding protein n=2 Tax=Tropheryma whipplei RepID=Q83MV3_TROWT Length = 399 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 151/373 (40%), Gaps = 30/373 (8%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI------DAVVLQQTGLTLRQAQRFLSFP 56 D IS R+ + + ++ +Q ++ S Sbjct: 35 DYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVW 94 Query: 57 RKSIE-----SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE---LHALHSF 108 + + S L+ D + P L+V G + S Sbjct: 95 KMRADYQQLLKSFQAAHHTGAKLVVTDKYN-----KLQDEKPHILWVRGNSPSILLDTSQ 149 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 ++++VG+R S+YG+ +LA + I SG A GIDG AH +AL +I Sbjct: 150 KVSIVGTRCCSYYGKSVTADISYSLARKNYVIVSGGALGIDGTAHMSALSAGKSTIVFFA 209 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ I+PR + L + + E G +VSE P P + F RRNR+I+ + V+V EAA Sbjct: 210 GGVDWIYPRGNEALFSKICES-GIIVSEMPCGSRPTKWRFLRRNRLIAAIPSAVVVTEAA 268 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGL 287 RSGS+ TA A + V A+PGPI +P SEG + LI+ A VT ++++ + Sbjct: 269 ARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLV 328 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELE 346 S D + ++ + + + + +G +V + + LE Sbjct: 329 --------VSPIQKDSFGLQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLE 380 Query: 347 LAGWIAAVPGGYV 359 L+G + G+ Sbjct: 381 LSGQVIRSGSGWR 393 >UniRef50_C8NTX1 Smf family protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTX1_9CORY Length = 398 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 153/393 (38%), Gaps = 37/393 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQA-QRFLSFPRKSIE 61 E W L + ++ + I + + + Sbjct: 5 KLESWAYLNRVVEGPNRHLLAHLNAGRDADEIAHGIRTRASWLGELGPATESRYTWDRPA 64 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLAT---------------------------TDYPG 94 L Q + LI + +P P Sbjct: 65 EDLEEAAQHGYSLITPEHPEWPA--DEIAASFGSALSKQERGLGPAADEEPLPPEGYPPH 122 Query: 95 ALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 +L+ G L L + + +VG+RA S YG C LA TI SG A GID VA Sbjct: 123 SLWARGNTNLAQLFAQSVGIVGTRAASAYGHHATADLCTGLARHRYTIVSGGALGIDTVA 182 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 H+ AL +++ V G I+P+R+ +L + +GGA+V+E+P + P + F RN Sbjct: 183 HETALNNQALTVVVAACGPGQIYPKRNGKLFDRIAAEGGAIVTEYPPGMTPDRHRFLTRN 242 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAI 271 R+++ L++G +VVEAA RSG+L T + R A+PGPI PGS G + I+ A Sbjct: 243 RLVAALTQGSIVVEAAFRSGALNTLKWVKTYNRVPLAVPGPILGPGSLGTNLAIRNDRAD 302 Query: 272 LVTEPEEILENLQFGLHWLPD-APENSFYSPDQQDVALPFPELLANV---GDEVTPVDVV 327 +V ++ + L D E F + Q ++ + ++ G + V Sbjct: 303 MVLSADDAHQQLGAIGSTDADGQLEIDFEADAIQKLSRNELRVYDSLPVAGAGGIDAEAV 362 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 A+ +G + V L++L G + + R Sbjct: 363 AQASGFTIALAVHLLMDLHKKGLVVRKGKMWER 395 >UniRef50_A1SLR3 DNA protecting protein DprA n=1 Tax=Nocardioides sp. JS614 RepID=A1SLR3_NOCSJ Length = 378 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 103/378 (27%), Positives = 153/378 (40%), Gaps = 17/378 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 D + + L ++ ++ + + + ++L L Q + + Sbjct: 6 EDRLLRVALSALGEPGDPRLLDWVTRLG-PAAVHELLLTGHTLEELQTDPDARRAAEDPQ 64 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEGELHALHS-FQLA 111 +L + E +P QL P L+V G +A Sbjct: 65 RTLARAADRGLRFVVPGDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAGSVA 124 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 VVGSR+ + YG +A + SG A GID AH+ AL G ++AVL G Sbjct: 125 VVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGIDQAAHRGALVGGGSTVAVLACGA 184 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +P H L + GA+VSE P F RNR+I+ LS G +VVEAA RS Sbjct: 185 DRCYPAAHRELIEYI-AGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAAARS 243 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 G+L TA A R V +PGP+ + SEG H LI+ Q A+LVT ++LE + L Sbjct: 244 GALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQHL 303 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDV-VAERAGQPVPEVVTQLLELELAG 349 E + + ++L V + +A AG + E L+ L G Sbjct: 304 A--AEPRGPVRSRDRLTTRQRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAERG 361 Query: 350 WIAAVPGGYVRLRRACHV 367 VPGG+ RL H Sbjct: 362 LAEQVPGGW-RLAALAHQ 378 >UniRef50_B6XX38 Putative uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 RepID=B6XX38_9BIFI Length = 455 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 98/392 (25%), Positives = 148/392 (37%), Gaps = 34/392 (8%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G + R + P + W Sbjct: 66 AACKTLDAAFINGITRWGRSINSRGMASFH--GAMVSWQHRLTTLPSTDPDELKDWFTVG 123 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYG 122 ++ +P QL P L+ +G AL + VVGSR S YG Sbjct: 124 GTQWIVAPHHPCWPSQLADLTMYTDWAAPLCLWGQGNPQALVSCPEPIGVVGSRGVSEYG 183 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + + A G I SG A G D AH A+Q G ++AV GLN I Sbjct: 184 RQSAHELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGAPLAGRTVAVFAGGLNHI 243 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ + RL +++ GAL+SE P A F RNR+I+ LS ++V +A RSG+L Sbjct: 244 GPKSNERLFETIISHSGALISELCPGTAPEARRFLIRNRLIAALSSSLIVAQARARSGAL 303 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E R VFA+PG + P + G + LI++G A ++ +I E P Sbjct: 304 NTAGWANELNRRVFAVPGDVTMPHNTGCNRLIQEGRANIICSLTDIDEFCHASHRPQPIV 363 Query: 294 PENSFYSPDQQDVALPFPE----LLANVG-----DEVTPVD---VVAERAG---QPVPEV 338 + DV + +L + D + P+ + Sbjct: 364 IDGEQTEKPADDVLPESDDTTRIILKAIRKCDAKYGHVSTDGLLAILAETNPEEYPISRI 423 Query: 339 VTQLLELELAGWIAAVPGGYVRLRRACHVRRT 370 V +L LEL G I+ G + +R Sbjct: 424 VLELGVLELNGLISTQHGNITIVNANTTQQRN 455 >UniRef50_A4FME1 DNA processing chain A n=2 Tax=Pseudonocardiaceae RepID=A4FME1_SACEN Length = 389 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 105/372 (28%), Positives = 158/372 (42%), Gaps = 19/372 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 L +++ + VV + + S E++ Sbjct: 19 LLARAYLSAVAEPPAPALAGFIAAHGASRAA-EVVRSGSAPPSVADEVDARREHVSGEAA 77 Query: 64 LCWLEQPNHHLIPADSEFYP-PQLLATTDY----------PGALFVEGELHALHSF--QL 110 L L+ + +P + D P AL+V G++ S + Sbjct: 78 LEAAAMAGLRLVTPEHSGWPHKSFDSLADATAIGLPGMAAPIALWVRGQVAFAESLGTSV 137 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A+VG+RA S YGER F LA G T+ SG A GIDG AH+ AL +IA L G Sbjct: 138 AIVGARAASGYGERVAAEFAHGLAIEGYTVVSGAAYGIDGAAHRGALAAGRPTIAFLACG 197 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 + +P H+ L ++ EQ GA+VSE+ P + F RNR+I+ +G +VVEA R Sbjct: 198 ADIDYPSGHSMLLRAIGEQ-GAVVSEYAPGTEPRKHRFLVRNRLIAACGQGTVVVEAGAR 256 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHW 289 SG+ TA A GR V A+PGP+ + S G H +++ G A+LVT + + E L Sbjct: 257 SGASNTANTADALGRPVMAVPGPVTSKSSVGCHEMVRSGKALLVTNVDHVREVLSPLGVG 316 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGD-EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + + + +L + D T D +A +G P+ +V L LELA Sbjct: 317 P--TTDLPVPAKATDSLDRVAKQLHDALSDSAATSADELARDSGLPLRKVRALLPALELA 374 Query: 349 GWIAAVPGGYVR 360 G G+ R Sbjct: 375 GLAVREERGWSR 386 >UniRef50_Q72GH5 Competence protein dprA n=3 Tax=Thermus thermophilus RepID=Q72GH5_THET2 Length = 334 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 108/353 (30%), Positives = 159/353 (45%), Gaps = 26/353 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + ++ + L +A R L E Sbjct: 4 LALALLPGIGPKRLLEVLKA--------EDPLGFLRERFPEAWRHLPEAEAQAERERRRA 55 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 E L+ E +P L A P L+++GEL +A+VG+R S + + R Sbjct: 56 EALGVRLLGLWEEGFPEGLKALPQPPTHLYLKGELPP-EREAVALVGTRRASPWALAFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L+ G+ + SGLARGID AH AL+ G ++ VLG+ L+ ++P + LA + Sbjct: 115 KLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDRVYPPENRPLAQRMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFP P FPRRNR+I+GL + V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + S G + LI+ GA V E++L L P ++ Sbjct: 230 LAVPGRPMDERSLGANRLIQDGAYPVLSAEDVLSYLGMSARPKP-----------LPGLS 278 Query: 308 LPFPELLANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 L A + + + +A G P V++ L LEL G A+PGG Sbjct: 279 PEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELKGLARALPGGRY 331 >UniRef50_UPI000196B990 hypothetical protein CATMIT_00487 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B990 Length = 252 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 137/257 (53%), Gaps = 18/257 (7%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 + + I + ++ + + + S+ YP Sbjct: 13 LKYKGQFDLIYKALERKERVDESLKEELFKTIKS--------------SYTTIISDDYPQ 58 Query: 85 QLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 QL P L+ G L L +AV+G R S YG + R+ + L + I SG+ Sbjct: 59 QLKYINCPPFVLYYYGSLSLLDKDCIAVIGKRDCSEYGVQATRVLVKELVKNDIVIVSGM 118 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 A+GIDGV+H+ A++ G ++AVLG+G++ +P + L + + ++SE+P PP Sbjct: 119 AKGIDGVSHRTAIRSKGHTVAVLGSGIDYPYPPMNEDLY--YVLKNELVLSEYPGSTPPR 176 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 +FP+RNRII+GLS+ +LV EA L+SG+++T ALEQG++VFA+PG + + S+G + Sbjct: 177 KDHFPKRNRIIAGLSQKLLVTEADLKSGTMITVGFALEQGKDVFAVPGRVYD--SKGCNA 234 Query: 265 LIKQGAILVTEPEEILE 281 LI+QGA LV E+ILE Sbjct: 235 LIQQGAKLVMNVEDILE 251 >UniRef50_B7ABZ5 DNA protecting protein DprA n=3 Tax=Bacteria RepID=B7ABZ5_THEAQ Length = 410 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 25/333 (7%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + ++ + + + Q R + R++ E SL Sbjct: 4 LALAFLPGIGPKRLLELLGAEDPKEALAERFPQLLERLSEAEARAEAERRRAEELSL--- 60 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGR 127 ++ E +P L P L+++G L +A+VG+R + + + R Sbjct: 61 -----RILGLWEEGFPESLKRLPQPPTHLYLKGTLPE-EGQAVAIVGTRRAAPWALSFAR 114 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 TLA G + SGLARGID AH AL+ G ++ VLG+ L+ I+P H +A + Sbjct: 115 KLARTLAEAGAVVVSGLARGIDREAHLGALEAGGRTLGVLGSALDQIYPPEHRPMAERMD 174 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 L+SEFPL P +FPRRNR+I+GL++ V+VVEA L SG+L+TAR ALE G+EV Sbjct: 175 -----LLSEFPLGTGPKPEHFPRRNRLIAGLARAVIVVEAPLESGALITARYALELGKEV 229 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG + GS G + LI+ GA V PE+ L L F + +++ Sbjct: 230 LAVPGRPTDQGSLGANRLIQDGAYPVLAPEDALAYLGFSGR-----------RKEVLELS 278 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVT 340 L + + +AE G V++ Sbjct: 279 PEESRLYELLRQGEALPEHLAEALGMSPEGVIS 311 >UniRef50_A3TZ48 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ48_9RHOB Length = 372 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 5/276 (1%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 M + R+ S + + + P I + L + Sbjct: 1 MRSRRVGISTFYRLLSEHGTASAALVALPEIAAAAGVEGYEVC--PEPVITAELRDARKA 58 Query: 71 NHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFC 130 LI +E YPP L+ D P L+V G+ ALH + VVG+R S G R R Sbjct: 59 GARLICIGTEDYPPGLMDLADPPPMLWVIGQTSALHRPMIGVVGARNASSLGLRMARNLA 118 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 L+ G + SGLARGID AH+A+ + ++AV+ G++ ++P +A LA ++ Sbjct: 119 AALSEAGYVVVSGLARGIDAAAHQASAETG--TVAVMAGGVDALYPPENATLADAIP-GT 175 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 GA +SE P+ P A +FPRRNRII L++ ++VVEAA +SGSL+TAR AL+QGREV A+ Sbjct: 176 GARLSEMPMGRQPQARHFPRRNRIIPALARALVVVEAAAKSGSLLTARAALDQGREVLAV 235 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 PG + + G + LI+ GAILV +++ + Sbjct: 236 PGHPFDARAAGGNMLIRDGAILVRSARDVIAPCRPS 271 >UniRef50_Q2J706 DNA processing protein DprA, putative n=5 Tax=Actinomycetales RepID=Q2J706_FRASC Length = 446 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 100/385 (25%), Positives = 149/385 (38%), Gaps = 36/385 (9%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + + L + + AV +++ G + P Sbjct: 32 ERLARVALARV--------------FGPEHRRVAVEVRRRGAFEVWNALRAAHPSVDPVR 77 Query: 63 SLCWLEQPNHHLIPADSEFYP---PQLLATTDY--------PGALFVEG--ELHALHSFQ 109 L + L+ +P L D P AL+V G L L Sbjct: 78 DLDAAWRAGARLVCPQDAEWPLELDALDRLRDAGDGSMIGTPLALWVRGPLNLSELPPRA 137 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + VVG R + YG +A +G + SG A GID AH+ AL G ++AVL Sbjct: 138 VTVVGCRTATSYGLHLAGEIAFAMAEQGWAVVSGAAFGIDAAAHRGALAAAGPTVAVLAG 197 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G++ +P H L + + GA+VSE PP F RNRII+ LS+G ++VEA Sbjct: 198 GVDVPYPTAHVELLEEI-ARTGAVVSEVSPGTPPYRRRFLTRNRIIAALSRGTVLVEAGH 256 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ---GAILVTEPEEILENLQFG 286 RSG+L T GR V +PGP+ + S G H L++ +LVT E+I E + Sbjct: 257 RSGALNTVAHTRRLGRPVMVVPGPVTSAMSAGCHRLLRDFREQTVLVTGAEDIREEIASI 316 Query: 287 LHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLEL 345 + + + ++ ELL + V V+A R G V+ L L Sbjct: 317 GSL---VQRPASGNGPRDGLSEAVRELLDAMPARAAVGVSVLARRTGLRPEAVLAMLGPL 373 Query: 346 ELAGWIAAVPGGYVRLRRACHVRRT 370 + G + V GG RL Sbjct: 374 AVEGLVENVAGG-YRLTDLGRAPSN 397 >UniRef50_Q03S82 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03S82_LACBA Length = 296 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 9/287 (3%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL-------QQTGLTLRQAQRFLSFP 56 + +LRL ++ + HW+ + I A+ Q+ ++ + Q Sbjct: 6 RDFFLRLPLLTGVGQQTRRACWHWLTEHPTITALTPADLNRLCQEAAISADRTQLLQQVF 65 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + ++ + YP QL T P L+ G+L L QLAVVGSR Sbjct: 66 TSQLAKRVTENQRH-TGCLTIVDAAYPEQLRETYAPPVVLYYLGDLRWLTGPQLAVVGSR 124 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S Y R R + + V + SGLA+G+D +AH+AAL G +IAV+G GL+ +P Sbjct: 125 QPSPYALRAMRRLLPQVVRQQVCLVSGLAQGVDTLAHQAALAHRGKTIAVIGTGLDHCYP 184 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L L ++SE+P ++FP RNRII+GLS+ LVVEAA SGSL+T Sbjct: 185 AGNRDLMTE-LAHHHLVISEYPWGTAGARHHFPERNRIIAGLSQSTLVVEAARHSGSLIT 243 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL++ R V A+PG + NP S G + LI GA + E I+E + Sbjct: 244 ANIALQENRNVLAVPGSLDNPNSVGTNELILAGAKPILNSEHIIEEV 290 >UniRef50_B1VG86 Putative DNA processing protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG86_CORU7 Length = 416 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 99/405 (24%), Positives = 152/405 (37%), Gaps = 46/405 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIA-------------HWVAKQSHIDAVVLQQTGLTLRQ 48 + W+ L D++ + + A+ + Sbjct: 11 QNLLAWIYLRQTIEASNTDILNLLWPEGWENRLEGRDAGKGALPDVRALASRIRHRDPSL 70 Query: 49 AQRFLSFPRK----SIESSLCWLEQPNHHLIPADSEFYPPQLLA---------------- 88 R L E+ L LI + +P L Sbjct: 71 PHRILESTAARVDCDPEAELDAATAAGFRLITPLDQEWPETLDHAFARIDDRGSDQNSAV 130 Query: 89 --TTDYPGALFVEGE--LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGL 144 P AL++ G L L + VVG+R + YG + LA G +I SG Sbjct: 131 RGLAAAPFALWLRGNGNLRNLSRQSVTVVGTRQPNAYGAQLSTQLSTDLALAGYSIVSGG 190 Query: 145 ARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL 204 ARG+D AH AAL+ G SIAVL GL+ +PR+H L + E G +VSE+ L P Sbjct: 191 ARGVDRCAHTAALRAGGASIAVLACGLDVDYPRQHVGLFKQIAES-GVVVSEYALGTHPA 249 Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHW 264 + F RNR+++GLS G +V +AA RSG+L T A + +PGP+ S+G Sbjct: 250 RHRFLTRNRLVAGLSAGTIVTQAANRSGALNTLNWAEVMLNQPMVVPGPVDTALSQGVLH 309 Query: 265 LIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYS----PDQQDVALPFPELLANVGD 319 ++ G A V + E ++ + PE Q ++L + G Sbjct: 310 RLRDGRAQPVWTAGHVRELVEASSQFNAQVPEQQAMVFGSGTGVQSMSLNQVTVYDAAGL 369 Query: 320 EVTPVD---VVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 V + G + V+ L ELE G ++ +VR+ Sbjct: 370 PGGGGPTLRDVQQETGLSIQLVMRTLKELESQGLVSREGERWVRV 414 >UniRef50_C2ANQ5 DNA protecting protein DprA n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ANQ5_TSUPA Length = 373 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 160/370 (43%), Gaps = 27/370 (7%) Query: 21 MVRIAHWVAKQSHIDAVVLQQ--TGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 ++ + V + +AV ++ G R E+ L +E L+ D Sbjct: 9 LIALIDAVGPDAAAEAVRRREFPAGFEDVAEATAARADRDRAEADLDHIEHLGGRLLTPD 68 Query: 79 SEFYPP-QLLATTDYP------------------GALFVEGELHALHSFQLAVVGSRAHS 119 +P +L P + G L L +A+VG+RA S Sbjct: 69 DGEWPEYRLAVLAARPRTPAQVHEDQWRELRPIALWMVGGGHLDDLLDRSVAMVGTRAPS 128 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YGER F LA G T+ SG A GIDGVAH+AAL G ++A + GL+ +P H Sbjct: 129 GYGERVADHFAGDLAAEGFTVVSGGAYGIDGVAHRAALAAGGPTVAFVAGGLDRPYPAGH 188 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A L + E GA++SE+P P + F +RNR++ ++ GV+V+EA LRSG+ TA Sbjct: 189 AGLFRRIAE-DGAVISEYPPGTVPAKHRFLQRNRMVGTVTGGVVVIEAGLRSGTRNTATW 247 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 A + V A+PGP+ S H LI+ GA LVT P E++E + P E Sbjct: 248 AGHRDVPVCAVPGPVTVATSVTCHQLIRDGARLVTRPAEVIEEVGRIGELAP---EREVP 304 Query: 300 SPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 +A + + PV +A AG P V+ L L+ G + G Sbjct: 305 VHRTDGLAAGELRVYDALPARSGLPVSEIASVAGLPARAVLGHLAMLDARGLVTKD-GAL 363 Query: 359 VRLRRACHVR 368 RLR R Sbjct: 364 WRLRSPTEDR 373 >UniRef50_Q6A7T7 DNA processing / uptake protein n=3 Tax=Propionibacterium acnes RepID=Q6A7T7_PROAC Length = 377 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 153/368 (41%), Gaps = 29/368 (7%) Query: 19 DDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPAD 78 R+ + +L +G R +R S ++ + E+ + Sbjct: 21 VMAKRLVE--MTAEELWQHMLTDSG--ERWHKRAKSL---DVDQLVERSEKAAMRFLIPG 73 Query: 79 SEFYPPQLLATTDY--------PGALFVEG--ELHALHSFQLAVVGSRAHSWYGERWGRL 128 E +P L + P L+V G L + +A+VG R+ S YG+ Sbjct: 74 DEEWPTGLDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVAVE 133 Query: 129 FCETLATRGV------TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 L T+ SG A GID AH+ AL G +++VL GL+T++PR ++ + Sbjct: 134 MAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLACGLDTLYPRGNSAV 193 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GALVSE PL P F RNR+I+ L+ G +VVEA RSG++ TA A Sbjct: 194 LEQI-AGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWRSGAINTASWANA 252 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 G V A+PGP+ + S G + LI+ G AILV + +++ P+ + S Sbjct: 253 LGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVR---GIVGELAPEPERPAGRSL 309 Query: 302 DQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + +D +A AG PV + L LE G A G Sbjct: 310 PTDILDAIELAVHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTWS 369 Query: 361 LRRACHVR 368 + A R Sbjct: 370 VTLARERR 377 >UniRef50_C1RMF6 DNA protecting protein DprA n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMF6_9CELL Length = 402 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 146/367 (39%), Gaps = 31/367 (8%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI------------------------DAV 37 + +++ + + D Sbjct: 16 DERAARAVWSALAEPGDAVAGALVQACGAAPALAWVADAVATPHPDWAVLETLGGGGDDA 75 Query: 38 VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGAL 96 + ++ GL + + +P E ++ L+ +P L P AL Sbjct: 76 LRRRVGLGVARWAA--RWPALDPERDRAAAQRCGARLVVPGDPAWPRGLDDLGVLTPFAL 133 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +V G LAVVG+RA + YGER LA RG + SG A GID AH+ A Sbjct: 134 WVRGAPPVAD-RTLAVVGARASTTYGERVTVDLAVELARRGWAVVSGGAYGIDAAAHRGA 192 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L GV+ VL G++ +P +ARL ++ GG+L SE P P F +RNR+I+ Sbjct: 193 LLGGGVTHVVLAGGVDRAYPAGNARLLEEVVRAGGSLFSEVPPGATPSRARFLQRNRLIA 252 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTE 275 ++ +VVEAA RSG+ TA A R V A+PGP+ + S G H L++ G A+ +T+ Sbjct: 253 ASAQATVVVEAAWRSGAASTAHHAARLLRPVGAVPGPVTSAASAGCHRLLRDGVAVCITD 312 Query: 276 PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQP 334 E +E L ++ + + + + V VVA RAG Sbjct: 313 AAEAIELAGDVGPDLA-PTPDAGVTRPTDGLDPLARLVHDGLARRTARDVTVVAARAGTT 371 Query: 335 VPEVVTQ 341 V + Sbjct: 372 VAQARAM 378 >UniRef50_C5CAH8 DNA protecting protein DprA n=6 Tax=Micrococcaceae RepID=C5CAH8_MICLC Length = 424 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 103/385 (26%), Positives = 158/385 (41%), Gaps = 33/385 (8%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG-----LTLRQAQRFLSFPRKSI-- 60 L + ++++L + + + + +L L R A + ++ Sbjct: 40 LAVQTVTALGPERALVLLTGREAIQPAERDLLADLAGTPDTLPRRWAAGLARWAPRAARL 99 Query: 61 --ESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALHS-FQLAVVGSR 116 E L L + L+ + + +P L + P L+ G + LAVVGSR Sbjct: 100 EPERDLVTLHRLGGGLLIPEDDAWPAALADLGEEAPLGLWFRGTGTLPPADRMLAVVGSR 159 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG------------VSI 164 + YG +G + SG A GIDG AH+AALQ ++ Sbjct: 160 EATAYGRTVTARCAAHAVQQGACVISGGAYGIDGAAHRAALQAPAAPEDAAGRGGVPPTV 219 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 AVL GL+ +P H L +++ G LVSE P P Y F +RNR+I+ L+ VLV Sbjct: 220 AVLAGGLDRFYPAGHEDLLRAVMAA-GLLVSEMPPGASPTRYRFLQRNRVIAALAGAVLV 278 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL 283 VEA RSG+ TA A GREV +PGP+ +P S G H L+++ A LVT +E L L Sbjct: 279 VEARWRSGAQNTAGHAFGLGREVGVVPGPVTSPSSAGCHRLLQESPARLVTTEQEALALL 338 Query: 284 QFGLHWLP-------DAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPV 335 + + + + + + P D + AG + Sbjct: 339 GQAPARSGGAGGRASTRAAPEPAARPTDGLTMEEALVHEALPLRQAVPADRITVSAGLAL 398 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 P V+ L L+ AG V + R Sbjct: 399 PTVLACLSRLQRAGLAERVEDRWRR 423 >UniRef50_A1SIY8 DNA protecting protein DprA n=2 Tax=Nocardioides sp. JS614 RepID=A1SIY8_NOCSJ Length = 349 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 19/317 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSFPRKS 59 D + L + + + + +A ++ AQ Sbjct: 12 DRLARVTLSRTIEPGDVRVTGLVSELGAGKVLGYLEAAGDVESHWGFALAQELGRV---D 68 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDY---------PGALFVEG--ELHALHSF 108 L I +P QL A + P L+V G +L L Sbjct: 69 PAQVLEQAAARGIRFIVPGDAEWPTQLGALRNAGALHERGGEPVGLWVRGAHDLRQLAGN 128 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 +AVVGSRA + YG LAT G T+ SGLA G+D AH+ AL G +IAVL Sbjct: 129 SVAVVGSRAATSYGAEQATELSRDLATMGHTVISGLAYGVDQAAHRGALIAGGPTIAVLP 188 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G++ +P HA+L ++ E+ G +VSE P P F RNR+++GLS+G +VVEAA Sbjct: 189 GGVDRPYPAAHAQLLEAIAER-GLVVSEAPPGAGPTRTRFLARNRVVAGLSEGTVVVEAA 247 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGL 287 LRSG+L TA R V +PGP+ + S G + L++ G A +VT ++++ +L Sbjct: 248 LRSGALNTAHWTTNLHRPVMGVPGPVSSAASTGVNQLVRLGQASMVTSAQDVITDLTTHA 307 Query: 288 HWLPDAPENSFYSPDQQ 304 + + + + D+ Sbjct: 308 NAAATSADGASGELDES 324 >UniRef50_Q8EQY9 DNA processing protein (Smf family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQY9_OCEIH Length = 294 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 96/277 (34%), Positives = 140/277 (50%), Gaps = 7/277 (2%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG----LTLRQAQRFLSFPRKSIESSL 64 L S+ + I Q + L++A+ F S Sbjct: 10 HLSRCRSITRSLLRNILQLDPSLKITYQSSANQLSSWLQIPLKKAEYFYSDLHNVALQKQ 69 Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGE 123 + + + E+YPP L D P L+ G++ L L+V+G+R + + Sbjct: 70 VIRDMQLYQTVTIVDEYYPPMLNTIKDGPIVLYAIGDIDILKKLPSLSVIGTRKPTAQAQ 129 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R + L +G I SG+ARGID AH+ L NG +IAVLG G + I+PR H L Sbjct: 130 RKMEIILP-LIQQGWIIVSGMARGIDSFAHQMTLHHNGKTIAVLGGGFHHIYPREHLSLF 188 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + Q G +++E+P D PP+ + FP RNRIISGL+ G LV+EA RSG+L+T AL+Q Sbjct: 189 HEIT-QKGLVLTEYPPDQPPIRHQFPERNRIISGLTMGTLVIEAMKRSGTLITVDQALDQ 247 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 GREVFA+PG ++G H +I+ GA LV E +I+ Sbjct: 248 GREVFAVPGNPWVQQTKGCHQMIQDGAKLVQETNDII 284 >UniRef50_B1C1T5 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=B1C1T5_9FIRM Length = 251 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 3/250 (1%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 I L+ G + Q + + ++ S+ YP L Sbjct: 4 EIILYFALKYAGDFDKIYQALERKEKIDDDLKGHLFKELKSKYTTIISDDYPAALKEINC 63 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF G+L+ +++ + V+G R S YG + L TI SG+A GID + Sbjct: 64 PPFVLFYYGDLNLVNTKCIGVIGMRQPSDYGIEVTKTIVSKLVLENYTIVSGMALGIDAM 123 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AH++A+ V G +IAVLG+G++ +P ++ + +++ ++SE+P ++ P NFPRR Sbjct: 124 AHQSAMNVLGKTIAVLGSGIDNCYPLKNKTIYE-IMKVNQLVISEYPGNLVPKKINFPRR 182 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NRIISGLS+ +LV EA RSG+++T ALEQG++++ +P I + S G + LI+QGA Sbjct: 183 NRIISGLSESILVTEANERSGTMITVGHALEQGKDIYCIPSRIND--SSGCNRLIQQGAK 240 Query: 272 LVTEPEEILE 281 LV + +I++ Sbjct: 241 LVMDISDIVD 250 >UniRef50_B9CKG0 Putative DNA processing protein DprA n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKG0_9ACTN Length = 299 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 10/295 (3%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++ ++YP L P L+ G+ L + L+V+G+R + YG + Sbjct: 5 WILTRGDDYYPKCLEDLHSPPRVLYGIGDPTLLSAPMLSVIGARRATPYGIAIAEMTARV 64 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 GVT+ SG A G D A +AL G +I VLG G + I+PR L + ++ G Sbjct: 65 AVDCGVTVVSGGAMGCDFAAGMSALSAGGKTIVVLGCGADVIYPRSSEPLILA-AQEQGV 123 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++S P PP + FPRRN II+ L ++V EA +RSG++ TA A++ GR ++A+PG Sbjct: 124 VLSLDPWKTPPRRFAFPRRNAIIAALGSVLVVTEAGIRSGTMTTAEAAIDLGRALYAIPG 183 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + LI +GA ++++ + +L + Q+D P Sbjct: 184 SIFSPTSAGTNRLISEGARIISDESSLAVSLALDFG---------TVARAQKDQTSPKSR 234 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHV 367 +++ + + + +A R G+ V ++ L + E +G I +P G R H+ Sbjct: 235 IISALLASPSRPEELAMRLGEDVLTLMRTLTDFEASGIIQRLPDGRYTPTREYHL 289 >UniRef50_C2E954 DNA processing protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E954_9LACO Length = 294 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 6/292 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E ++L + + + IA ++ + I + + + + +K+ Sbjct: 1 MNKREFLIKLS-VMGVPYSIQLSIAEFIERNDRIPSFSETDRFIEGKSFE-LERIFQKAF 58 Query: 61 ESSLCWLEQPNH---HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 S + + N + YP L P L+ +G+ + L VVGSR Sbjct: 59 SSEVERAYRKNVEYAGVATIIDRNYPKALKEIYHPPVVLYFQGDFELANEPALGVVGSRV 118 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 HS Y E +L + +G+ I SGLA+G D + H+ + G +IAV+G GL+ ++PR Sbjct: 119 HSPYAEDSLKLLLPDVINQGIVIVSGLAKGTDSIVHQMTMNYCGKTIAVIGTGLDVVYPR 178 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L + + G L++E+PL PL ++FP+RNRII+GL + +LVVEA RSG+L+TA Sbjct: 179 GNVMLQNEVAAK-GLLLTEYPLGSQPLKFHFPQRNRIIAGLVQTILVVEARHRSGTLITA 237 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 AL++ R V A+PG I S+G + LI GA E+I+E L Sbjct: 238 NVALQENRNVLAIPGKITESLSQGTNELIAAGAKPALCSEDIIEEFSNFLTN 289 >UniRef50_B4U6K4 SMF family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K4_HYDS0 Length = 333 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 30/355 (8%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLS-FPRKSIESSLCW 66 L SI + + R I + + F + + +++ Sbjct: 2 LKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIK 61 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L+Q N I +++ YP +L D P +F++G+ L +++VGSR Sbjct: 62 LKQLNIEAITYENKLYPANMLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMT 121 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + L T+ SG A GID AH++AL+ + +IAVLG G ++ ++ L + Sbjct: 122 KSVVSELRQ---TVVSGGADGIDSKAHQSALEESVPTIAVLGFGF--LYAKQS--LFGKI 174 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGRE 246 L++ G L++EF P Y FP RNRII+ L +LV++A+ +SG+L++A A + ++ Sbjct: 175 LDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKK 234 Query: 247 VFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 VFA G EG L+++ A L T + ++L + Sbjct: 235 VFAYVGNP-VEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNP--------- 284 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +L+ + D+ D + + ++ +L LE+ G+I+ G Y Sbjct: 285 -------ILSFL-DKPCTFDELLVKTNYDEEKLTMELTMLEIEGYISKD-GAYFV 330 >UniRef50_C7R3C0 DNA protecting protein DprA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3C0_JONDD Length = 395 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 34/351 (9%) Query: 46 LRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELH 103 + AQR+ P E L HL+ +P QL + P L+V G+ Sbjct: 39 AKWAQRWNARMPAVDNERDLRAARTLGAHLLTPSHPHWPRQLDDLAETSPWLLWVRGKSS 98 Query: 104 ALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 +++ +++VG+R S YG+ ++T + + SG A GID H+ +L+ N Sbjct: 99 MVNADASVSIVGTRTPSAYGDYVAHAILAGISTSKILVVSGGAYGIDAHVHRGSLEHNLP 158 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 S+AVL G++ ++P+ + +L L++ GALVSE P+ V P F RRNRII+GL Sbjct: 159 SVAVLAGGVDRLYPQGNKKLLQRLIDH-GALVSEMPVGVAPSRVRFLRRNRIIAGLGDVT 217 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILE 281 V+EAA RSGSL TA A GR V A+PGP+ + S G H LI +G A L+ P ++ Sbjct: 218 TVIEAAWRSGSLSTAHHAAGLGRAVMAVPGPVTSAQSAGCHRLIAEGYAALLGHPADLEA 277 Query: 282 NLQF----------------------------GLHWLPDAPENSFYSPDQQDVALPFPEL 313 + ++ +S + + + Sbjct: 278 IVNHRSSDRRERHADIGSDQRENSHAEPGVQRAGDMTGSHRQDDLFSRESDSLHEGERLV 337 Query: 314 LANV-GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 + +D + +G EV L LEL + GY R+ Sbjct: 338 YDALSPFRARFIDDLVAASGLSHLEVREILGILELKQLVICEQQGYRRVAE 388 >UniRef50_C0BVH3 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BVH3_9BIFI Length = 456 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 94/377 (24%), Positives = 143/377 (37%), Gaps = 37/377 (9%) Query: 16 LYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH-HL 74 L + I W + G + R + P E W + Sbjct: 73 LDAALINGITRWGRTINARGMASFH--GAMVSWQHRLTTLPSTDPEELKTWFTANGTQWI 130 Query: 75 IPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGR 127 + ++P QL P L+ +G+ AL S + VVGSR S YG + Sbjct: 131 VAPHHPYWPSQLADLTIHTDWAAPLCLWGKGDPQALVSCSEPVGVVGSRGVSEYGRQSAH 190 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTIHPRRH 179 + A G I SG A G D AH A+Q G ++AV GLN I P+ + Sbjct: 191 ELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGTPLAGRTVAVFAGGLNYIGPKSN 250 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 RL +++ GAL+SE P A F RNR+I+ LS ++V +A RSG+L TA Sbjct: 251 ERLFETIINHSGALISELCPGTVPEARRFLIRNRLIAALSSTLIVAQARARSGALNTAGW 310 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSF 298 A E R VFA+PG + P + G + LI++G A ++ +I E ++ Sbjct: 311 ANELNRRVFAVPGDVTMPHNTGCNRLIQEGQASIICSLTDIDEFCHAAHRPQSADAADND 370 Query: 299 YSPDQQD-------VALPFPELLANVG-----DEVTPVDVVAERA------GQPVPEVVT 340 P ++ +L + D + + + Sbjct: 371 DEPSEESTDTSLSQPTNATAAILKAIRTCSAKYGHVSTDGLLAILAESNPGEYSISRISM 430 Query: 341 QLLELELAGWIAAVPGG 357 +L +EL G I G Sbjct: 431 ELGLMELNGLICTQHGN 447 >UniRef50_Q03FJ6 Rossmann fold nucleotide-binding protein for DNA uptake n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FJ6_PEDPA Length = 286 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 6/287 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL---QQTGLTLRQAQRFLSFPR 57 M + +R+ ++L +I + K + + ++ + + Sbjct: 1 MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQS 60 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSR 116 + + + EQ ++ E YP L P LF G L L H +A+VG+R Sbjct: 61 EQLTHEIQINEQSG-GILTILDEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGAR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YGE+ + + +T SGLA+G+D + H+A L G +IAV+GNGL+ +P Sbjct: 120 MMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATLANAGSTIAVIGNGLDITYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +++A+L + ++ G ++SE+P PL ++F RNRII+GL+ VVEA SGSL+T Sbjct: 180 KQNAQLQNQI-QKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A AL + R V A+PG I + S+G + LI GA + E +++LE + Sbjct: 239 ASLALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEV 285 >UniRef50_A0JXT1 DNA protecting protein DprA n=1 Tax=Arthrobacter sp. FB24 RepID=A0JXT1_ARTS2 Length = 394 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 109/397 (27%), Positives = 158/397 (39%), Gaps = 35/397 (8%) Query: 1 MV--DTEIWLRLMSISSLYGDDMVRIAHWVA----------------------KQSHIDA 36 M + L + + + + Sbjct: 1 MTDHERIARAALSRLMEPQDAVGLALVRTAGAVDGLRIATGQLVSGPQLEQEVTALLAEN 60 Query: 37 VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGA 95 G++ + P + E L + + +I +P QL P Sbjct: 61 GTASWPGMSASLRRWAPRIPDLAPERDLATMHRLGGRMIMPSDSLWPGQLADLDLHEPIC 120 Query: 96 LFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 L+ G H L + +A+VGSR + YG +LA RG TI SG A GID AH Sbjct: 121 LWWRGTEHPLPAAAKSIALVGSRDSTSYGAAVTGDLAYSLAQRGFTIVSGGAYGIDAHAH 180 Query: 154 KAALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 +AAL G +IAV+ G++ +P + L + GA+++E P P Y F + Sbjct: 181 RAALAGAGDAMPTIAVMAGGVDRFYPSGNEELL-RTVANQGAVLAEVPPGSAPTRYRFLQ 239 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-G 269 RNR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H LI++ G Sbjct: 240 RNRLIAALSSVTVVVEARWRSGALNTAHHAESLGRAVGAVPGSVHSANSAGCHRLIREGG 299 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVT-PVDVVA 328 A+ VT+ EI E L E S D + L LL + T V+ + Sbjct: 300 AVCVTDAGEIAELASSSGESLA--DEAPAQSADHDGLTLEDLILLDALPLRSTSSVEKLT 357 Query: 329 ERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 AG V L L L G + GG+ R R+A Sbjct: 358 SVAGLSTDAVRAGLGRLGLLGLAESERGGWKRSRKAG 394 >UniRef50_B6GBZ5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBZ5_9ACTN Length = 309 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 132/295 (44%), Gaps = 6/295 (2%) Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW 125 +++ L E YP + D P L+ G+ AL + L+V+GSR S YG Sbjct: 5 AMDRFEIRL---GEEGYPESVAELPDPPSVLYGRGDPSALSTPALSVIGSRRASPYGIAV 61 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 L A GVT+ SG ARG D A +AAL G + VLG G + ++P L Sbjct: 62 AELTGRIAAESGVTVVSGGARGCDQAAGRAALDAGGRHVVVLGTGADVVYPATSRTLIDR 121 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 ++ G +S P PP + FP+RNR+I+ LS+ LV EA + SG+ TA A GR Sbjct: 122 AIDASGCALSIEPWGTPPQKWAFPKRNRVIAALSRATLVAEAGMPSGTFSTAETANALGR 181 Query: 246 EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 EV A PG I +P S G ++LI GA + + E + + L +P Sbjct: 182 EVLAAPGSIFSPESRGSNYLIANGACCIADDESLEVAISRIYGTLRFC---RGGAPGLSG 238 Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 + + + + + +A +T L LE+AG + + G V Sbjct: 239 LDGAERKAMDMLVANPLRPEELAAHLRLDAIACLTMLSSLEVAGMVTRLSDGRVS 293 >UniRef50_C6WZG8 Smf protein DNA processing chain A n=2 Tax=Flavobacteriaceae RepID=C6WZG8_FLAB3 Length = 342 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 97/338 (28%), Positives = 154/338 (45%), Gaps = 10/338 (2%) Query: 29 AKQSHIDAVVLQ----QTGLTLRQAQRF-LSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 + + G+ + + + E L + E+ N + P Sbjct: 5 GSAKEVWELSKSGLKNIYGIGKKISFEIGKAEHLLFAEKELSFCEKNNITINLRHLGHLP 64 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 L D P L+ +G L + S +++VG+R + YG+ + F + T + SG Sbjct: 65 THLNECEDAPAVLYQKGNLDSSLS-AVSIVGTRNITTYGKSFISDFLADVKTHKILTVSG 123 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 LA G D H+ ++ N + AVL +G +T++P ++ RLA +LE GG L++EF P Sbjct: 124 LALGADTEVHEVSINNNIPTAAVLAHGFHTMYPSKNRRLADKILEDGGVLLTEFNSSQKP 183 Query: 204 LAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPH 263 NF +RNRII+G+S +VVE A GS+ TA A REVFALPG I + S+G + Sbjct: 184 DRENFIQRNRIIAGISPATIVVETAFGGGSVSTATFANNYNREVFALPGKITDKYSQGCN 243 Query: 264 WLI-KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEV 321 LI + A ++ + E L LH S + + LL + + Sbjct: 244 QLIFQNKAAAISTVSGLAEQLG--LHKTEQTGVLFPSSEIRIKLPEQQLILLEALDKNTP 301 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 +D V+ + P ++ LLELEL G+I A+ G Sbjct: 302 LSLDDVSLKLDVPAYRILPDLLELELLGYIRALSGRQY 339 >UniRef50_C0W189 DNA-binding/uptake protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W189_9ACTO Length = 402 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 90/339 (26%), Positives = 139/339 (41%), Gaps = 18/339 (5%) Query: 40 QQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFV 98 ++ + +IE +L++ L+ +P QL P AL++ Sbjct: 63 RKLPWRQAIQRWLPRVAEANIEQQFEYLQRLGGRLMYPQHPDWPGQLNDLGEYAPLALWM 122 Query: 99 EGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G +++VG+RA + G++ L G + SG A GID AH+ AL Sbjct: 123 RGNFELAQPREWVSLVGARASTNLGDQLAAELSFDLVNAGFGVVSGGAFGIDTAAHRGAL 182 Query: 158 -------QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 +IA + G+ ++P L LL+ G +VSE P P + F Sbjct: 183 TVASQVSSEALATIAFMAGGVGQLYPASQLDLFNRLLD-VGLVVSEVPPSWRPARWRFLS 241 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-G 269 RNR+I+ S +VVEA +RSG+L TA ALE GR V A+PGP+ + S G H LI++ G Sbjct: 242 RNRLIAAFSAATVVVEAGVRSGALATAHRALELGRPVGAVPGPVTSQMSFGCHQLIRECG 301 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ------QDVALPFPELLANVG-DEVT 322 LVT +++ E L S + + + Sbjct: 302 VTLVTNAQQVGELFLGLGAGLTGGALASEGVQSELVFVSDDFNNPVHERVWLALPKYGEA 361 Query: 323 PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 VA+ AG V EV + L +AG + R+ Sbjct: 362 TFVSVAKVAGLSVSEVSAAVSALLVAGKVEVFGDKCRRI 400 >UniRef50_Q04F43 Rossmann fold nucleotide-binding protein for DNA uptake n=2 Tax=Oenococcus oeni RepID=Q04F43_OENOB Length = 295 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 3/227 (1%) Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + + N + YP QL P LF EG L+ L+S + +VG+R Sbjct: 69 LEDFINEYEKYRSLN--FLAICDREYPKQLKEIYQAPIILFYEGSLNLLNSPMITIVGTR 126 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG++ F + G+ + SGLA+GID AH+ AL+ G +IAV+GNG N +P Sbjct: 127 TMTNYGKKILEEFVPKIIDSGIAVVSGLAKGIDAYAHQLALEKQGTAIAVIGNGTNISYP 186 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + ++ G L+SE+ P Y+FP RNRI++GL+ LVVEA RSGSL+T Sbjct: 187 AENQSIQKRII-SDGLLLSEYFPKSRPKQYHFPARNRILAGLTSATLVVEAKERSGSLIT 245 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A A ++ R V A+PG + S G + LI GA V + ++IL + Sbjct: 246 AAYATQENRNVLAIPGDLNRNNSNGTNQLIADGAKAVLKIDDILNEI 292 >UniRef50_UPI0000510417 DNA protecting protein DprA n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510417 Length = 404 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 106/315 (33%), Positives = 154/315 (48%), Gaps = 12/315 (3%) Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG--ELHALHSFQLAVVGSRA 117 L + + L+ + +P L P L+V G L+ +A+VG+RA Sbjct: 90 HRDLEAVHRLGGRLVIPSDDEWPTALTDLGPAAPLGLWVRGAARLNTALRSAVAIVGARA 149 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S YG + LA RG+TI SG A GID AH+AA+ G +IA + G++ +P Sbjct: 150 SSNYGTKCASDLAWDLAARGLTIVSGGAFGIDAAAHRAAIAREGTTIAFMAGGVDRFYPV 209 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 + L +LE GA+VSE + P+ + F RNR+I+ S+ ++VEA RSG+L TA Sbjct: 210 ANTELFQQVLE-DGAIVSETAPGMTPMRHRFLLRNRLIAASSQVTVIVEAGWRSGALNTA 268 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ------FGLHWL 290 R ALE REV A PG + + S G H LI+ A LVT +++E + F L Sbjct: 269 RHALELSREVAAFPGSVYSASSTGTHRLIRAHEAELVTSCTDVIELIGGEEPTLFDDGRL 328 Query: 291 PDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ S D+A + + + V VA RAG V ++ L LELAG Sbjct: 329 TSEHPSTAASDPVDDLAEREKICVNVLSVTKALDVSTVASRAGLTVSNTLSALAVLELAG 388 Query: 350 WIAAVPGGYVRLRRA 364 A G+V+LR A Sbjct: 389 LSARRESGWVKLRPA 403 >UniRef50_D2RKL0 DNA protecting protein DprA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKL0_ACIFE Length = 370 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 163/347 (46%), Gaps = 12/347 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS-----IESSLCWLEQPNHHLIPAD 78 + ++ R S E W + +I Sbjct: 24 LREAFGSLEKAWKAGIKDLRAAGLLTPALEKVWRDSRKPALPEKIWDWCQVHGARIISRW 83 Query: 79 SEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGV 138 S YPP + P L+V+G L + LA+VGSR + YG F A V Sbjct: 84 SPDYPPLVDQLGAPPPVLYVKGRLPEQPA-CLAIVGSRKATDYGLAVAARFARAAALEKV 142 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 + SG A GID AH+AAL+ G+++AVLG GL ++PRRH RL + EQ GALV+E Sbjct: 143 PVISGGAYGIDAAAHRAALEAGGLTVAVLGGGLGELYPRRHLRLFDKICEQ-GALVTEQS 201 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 PPL NFP RNRII GLS+ VLVVEAA+RSG++ TA A ++ R+++A+PGPI + Sbjct: 202 PWTPPLPQNFPLRNRIIVGLSRSVLVVEAAIRSGAMSTAHAAADENRDLYAVPGPIDSET 261 Query: 259 SEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV- 317 S+G HWL+KQGA L +P E+L++L P +V+ E + Sbjct: 262 SQGTHWLLKQGARLGDDPRELLDSLLGREPGTCTGPAEEEEPDLFGEVSPEEQERAGALY 321 Query: 318 ----GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 ++ +A P+ + T LLELEL G I Sbjct: 322 RWIKKHRAQSLEDLAGAFPWPLAVLSTLLLELELGGRIRRNSRNRYS 368 >UniRef50_B8HA87 DNA protecting protein DprA n=2 Tax=Micrococcineae RepID=B8HA87_ARTCA Length = 402 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 99/372 (26%), Positives = 150/372 (40%), Gaps = 35/372 (9%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV---------------------- 37 M + L + + + + Sbjct: 9 MNPERLARAALSRLMEPQDAAGLALVQVAGAVDGLRIATGQVAAGPGLEQEISGLLADNG 68 Query: 38 -VLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGA 95 +GL + P + E L + + LI E +P QL P Sbjct: 69 PSANWSGLAASLKRWQPRIPDLAPERDLATMARLGGRLIVPSDELWPGQLSDLGIQEPIC 128 Query: 96 LFVEGELHALHSFQLAV--VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 L+ G L + + ++ VGSR + YG +LA RG+T+ SG A GID AH Sbjct: 129 LWWRGHEQPLPALECSIALVGSRDSTSYGASVTGDLAYSLAQRGMTVVSGGAYGIDAHAH 188 Query: 154 KAALQVNG---VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 +AAL +IAV+ G++ +P + L ++ Q GA+++E P P Y F + Sbjct: 189 RAALAGGSGAVPTIAVMAGGVDRFYPSGNEDLLRAVCNQ-GAVLAEVPPGSAPTRYRFLQ 247 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-G 269 RNR+I+ LS +VVEA RSG+L TA A GR V A+PG + + S G H L++ G Sbjct: 248 RNRLIAALSAVTVVVEARWRSGALNTAHHAETLGRAVGAVPGSVHSANSAGCHRLLRDGG 307 Query: 270 AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVA 328 A+ VT+ E+ E LPD + + D + L LL + T V+ +A Sbjct: 308 AVCVTDAAEVAELAAPSGTALPDLRQGAAQVQD--GLTLEDLILLDALPLRSTTSVEKLA 365 Query: 329 ERAGQPVPEVVT 340 AG V Sbjct: 366 AVAGLGQDSVRA 377 >UniRef50_C0WTK6 DNA protecting protein DprA n=3 Tax=Lactobacillus RepID=C0WTK6_LACBU Length = 292 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 12/292 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI------DAVVLQQTGLTLRQAQRFLS 54 M+ + LR+ + + +I W+ Q +++ + RF S Sbjct: 2 MLLRDFLLRIHLCNGIGIVGKSKIYDWIQSQKSTRFDVPSVDSLIKIANIRGGNVTRFSS 61 Query: 55 ---FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 + E ++ + E YP QL P +F G+L+ L+ L Sbjct: 62 TYIQLMNNSERVDQLVDSEKW--LCICDEHYPYQLKEAYTPPLVMFYRGDLNLLNEQMLG 119 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 +VG+R + Y + + I SGLA+G+D AH+ + +G +IAV+G GL Sbjct: 120 IVGARDATHYSMEILKQLLPGPLLNKLVIVSGLAKGVDTWAHQCTIANHGRTIAVIGTGL 179 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 N +P + +L + E+ L+SE+P +FP RNRII+GL + VLV EA S Sbjct: 180 NIAYPSMNQQLQQQIAEEQ-LLLSEYPNGSRGYKNHFPERNRIIAGLVESVLVTEAKHHS 238 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 GSL+TA AL+ R V A+PG I + S G + LI GA + ++LE Sbjct: 239 GSLITANLALQNNRNVLAVPGRINHYLSAGTNELIAAGAKPILRSNDVLEEY 290 >UniRef50_C7MNC4 DNA protecting protein DprA n=3 Tax=Coriobacteriaceae RepID=C7MNC4_CRYCD Length = 328 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 91/256 (35%), Positives = 124/256 (48%), Gaps = 3/256 (1%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + S YP L P L+ G L +L LA++G+R + YG F A Sbjct: 33 VSIGSSTYPKALTCINKPPHTLYGIGSLESL-EEGLAIIGARRATPYGLSCAERFARHAA 91 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 RG+ I SG ARG D AH+AAL+ G ++A LG G + +P H L ++ GGA+V Sbjct: 92 QRGICIISGGARGCDARAHRAALEAGGRTVAFLGGGCDQPYPPSHVPLFQEIINNGGAIV 151 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE D P L Y F RNR+I+GL+K L+VEA + SG+ TA ALE REV A+PG I Sbjct: 152 SENEWDFPALPYTFRARNRLIAGLAKATLIVEAGIPSGTFSTADEALEANREVLAVPGAI 211 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFG--LHWLPDAPENSFYSPDQQDVALPFPE 312 +P S G + LI QGA + + E L L + + + Sbjct: 212 TSPTSAGANRLIYQGATPIVDDETFDTALSSLFCLLKQECIHMDDDSKSLELPLDAVTQA 271 Query: 313 LLANVGDEVTPVDVVA 328 LLA + E D + Sbjct: 272 LLAALRAEPLRTDTLI 287 >UniRef50_D2EIU8 DNA processing protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIU8_PEDAC Length = 289 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 6/288 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVL--QQTGLTLRQAQRFLSFPRK 58 M + +R+ ++ +I V Q + + Q +++ Sbjct: 1 MELRDFLIRIKIGTTFGIKKQSQIYQTVRDQPELSISEWVHTSPLIADEQRSDLVNYLHS 60 Query: 59 -SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVGSR 116 ++ + EQ ++ YP L P LF G L L + +A+VG+R Sbjct: 61 SKLKRKIHENEQNG-GILTIADPAYPDILREIYCPPTVLFYRGRLDLLQEPRMIAIVGAR 119 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG + L + SGLARG+D + H+A + G +IAV+GNGL+ +P Sbjct: 120 NMTRYGMATVKKLVPGLLEHQLVTVSGLARGVDAMTHQATVDGAGKTIAVIGNGLDVTYP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 +++A L ++Q G L+SE+ PL ++F RNRII+GL++ ++EA +SGSL+T Sbjct: 180 KQNAVLQDQ-VQQTGLLLSEYAQGARPLRHHFVERNRIIAGLAQATCIIEAKQKSGSLIT 238 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 A AL + R V A+PG I + S G + LI GA + ++LE + Sbjct: 239 ASLALGENRNVLAVPGSIFSENSRGTNELIAAGARPLISLNDVLEEVG 286 >UniRef50_A8URR9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URR9_9AQUI Length = 336 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 142/285 (49%), Gaps = 11/285 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--LTLRQAQRFLS--FP 56 M E+WLRL + + R+ +I + + + +A+ LS F Sbjct: 1 MGSFELWLRLKLTKGVGEITLYRLYKTFGGAENILSADYKDLKGCVGESRARAILSGDFD 60 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 K E L +E + ++I + E YP L D P +F+ G L L + +VG+R Sbjct: 61 EKVYEEVLRAVESGSIYVITLEDEEYPSALKRIKDPPPLVFLRGSLRKL--PLVGIVGTR 118 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + Y + +RG + SG A G+D AH +A++ +G ++ +LG G+ Sbjct: 119 KPTPYTLNFVEELVSMAVSRGYGVVSGGAAGVDSKAHLSAVENSGYTLCILGFGIL---- 174 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + ++ S+ E GGAL+SEF + FP+RNR+I+ LS+ ++V EA SGSL+T Sbjct: 175 KARGKVFESISESGGALLSEFLPHERGDRHTFPKRNRLIAALSEFIVVPEAGGSSGSLIT 234 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEIL 280 A A++QG++V+A G + +G + L+++G A L+ + + Sbjct: 235 ADHAVKQGKKVYAHIGIGRSSSWDGCYRLVREGKAELIKDGSHVF 279 >UniRef50_B0A6Y5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y5_9CLOT Length = 329 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 9/307 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW-----VAKQSHIDAVVLQQTGLTLRQAQRFLSF 55 M + E+ + L I L + +I + ID + + + L + Sbjct: 7 MNNAELIITLTLIKGLGRKTINKIIRQGVLNSLETIETIDYLNNINLKIKGIITKDELKY 66 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 + + ++ ++ + + E +P +L D P ++ +G+ + L+ +A++GS Sbjct: 67 ANEVAKRTIEICDREDIKISTLLDEDFPQKLKNIDDNPVIIYSKGDYNNLNDKGVAIIGS 126 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S +G L+ + TI SGLA G D AH +L G +IAV+ GL+ ++ Sbjct: 127 RNPSLHGVNVSYKISSILSQKNYTIVSGLANGCDTFAHLGSLDTYGKTIAVMPCGLDMVY 186 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L ++ G ++SE+P Y R+R+ S LS+G++V+E GSL Sbjct: 187 PNNNCDLFKRIINNNGCVISEYPPSQAVSKYRLIERDRLQSALSEGIIVIETTENGGSLH 246 Query: 236 TARCALEQGREVFALPGP---IGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWLP 291 T A +Q + V +G L++ I + + + + E L+ ++ Sbjct: 247 TVNYAFDQNKIVSCYKHNKNYSNLKTVKGNIKLLQNDEVIPIYDTKSLNEFLKKVDNFYK 306 Query: 292 DAPENSF 298 N Sbjct: 307 YQNTNQK 313 >UniRef50_D2RAN2 DNA protecting protein DprA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RAN2_GARVA Length = 514 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 97/386 (25%), Positives = 155/386 (40%), Gaps = 44/386 (11%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHID--------AVVLQQTGLTLRQAQRFLSFPRKSIE 61 L I ++ + ++ K + R L P + E Sbjct: 118 LSFIKK--HKELALLENYFKKGLTAWGYHNNNAPKSLEVLHNSISTWCVRLLHLPTWNSE 175 Query: 62 SSLCWLEQPN-HHLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVV 113 S W +I S+++P QL P L+ G L LA+V Sbjct: 176 SLCQWFTCGGKQWIIAPHSKYWPKQLQDLAFQSHFSPPLCLWGVGNPQTLTQCHNPLAIV 235 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--------GVSIA 165 GSR+ + YG F A++G T+ SG A GID AH AL G +IA Sbjct: 236 GSRSCTDYGRELAYQFAYDCASKGHTVISGGAYGIDAAAHWGALDAQDIDENKPTGKTIA 295 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V GLN + PR + +L ++ +GG +SE D P+ + F RNRII+ L+ ++V Sbjct: 296 VFAGGLNHMGPRCNYQLFEQIIAKGGVCISELCPDTTPVGHRFLLRNRIIAALASKIIVA 355 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQ 284 +A L+SG+L TA A + RE++A+PG I P + G + LI AI++ ++I Sbjct: 356 QARLQSGALNTATWATDLNRELYAIPGDINQPNNAGCNKLIHDSQAIILCSTQDIDILFP 415 Query: 285 FGLHWLPDAPENSFYSP-DQQDVALPFPELLANV-----GDEVTPVDVVAERAGQ----- 333 H+ + D ++ ++ + E+ VD + E Sbjct: 416 QSHHYFAYSQPKPEKLSIDYKNYDNTQKLIIDAITTCKRKHELANVDRIYEIIKTSYKEK 475 Query: 334 ------PVPEVVTQLLELELAGWIAA 353 + E+ ++ LEL G I Sbjct: 476 QLDYIPSIAEISGKIALLELEGIIVQ 501 >UniRef50_A6YFL4 Putative smf family protein n=1 Tax=Arthrobacter sp. AK-1 RepID=A6YFL4_9MICC Length = 399 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 129/303 (42%), Gaps = 22/303 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSH------------IDAVVLQQTGLT-LRQ 48 + L + + + + V ++ R Sbjct: 96 ENRIARAALTRMFAPTDLVARALVARHGAHAAYRMALGARPVFPFWDVTAEELADGLDRW 155 Query: 49 AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL---HAL 105 A R + E+ L +E+ + E +P L D P L+ G++ Sbjct: 156 APRPRELDTHAAEADLAAIERLGGGFLVPGDEHWPTGLDDLPDAPYGLWYRGDIGNGIPA 215 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----NG 161 S A+ GSR + YG LA RG+ + SGLA GID AH+AAL Sbjct: 216 PSRCAALTGSRDSTSYGAAVTGDIAYGLAQRGICVISGLAYGIDAHAHRAALAGSQGDGP 275 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +IAVL GL+ +P +A LAA++ G +SE P P F +RNRI++ L+ Sbjct: 276 ATIAVLAGGLDRDYPSGNADLAAAIRA-NGLTLSELPPGTAPSRARFLQRNRIVAALAGV 334 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEIL 280 VVEA RSG+L TA A R V A+PG + + S G H L+K+G A LVT+ E+ Sbjct: 335 TCVVEARWRSGALNTAHHAETIARHVAAVPGSVHSANSAGCHRLLKEGIAALVTDAAELT 394 Query: 281 ENL 283 E L Sbjct: 395 ELL 397 >UniRef50_B0MQ46 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ46_9FIRM Length = 500 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 128/322 (39%), Gaps = 5/322 (1%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIES 62 E ++ L+ I + + + + + + + + Sbjct: 2 EYYIYLLQIFGGGNPKIHEVIKAYGNARLAYEHISSGDMSHIPSNRHEYVRRASLERSKV 61 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWY 121 + + N ++ D YP QL + P LF G+++ L +++VG R Sbjct: 62 IMDYCAGNNIGIVTIDDRNYPEQLKNIYNPPVLLFTAGDINCLQGKLAVSIVGPRKPFGN 121 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 R C LA + + SG A GID +AH +++ + ++AVL G+ +P Sbjct: 122 AIRLAENICYNLARSDIVLVSGFALGIDRIAHNNSIRHHKPTVAVLACGITIDYPNNSFG 181 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L ++++ GG ++SE D P + F RNRIISGLSKG +V+ SGSL+TA A Sbjct: 182 LRKNIIDNGGLILSELLPDTPCNSDYFKFRNRIISGLSKGTVVIGGYNGSGSLITANHAF 241 Query: 242 EQGREVFA-LPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS 300 EQ REVF +P + ++ GA V + +I+ D Sbjct: 242 EQDREVFFTIPDDTLDKKYSRVIRFLRDGAHSVYDFYDIINEFYPTYRDRIDDTYLDKEQ 301 Query: 301 PDQQDVALPFPELLANVGDEVT 322 + E DE T Sbjct: 302 LTSFVMHEDVRETPPA-EDEPT 322 Score = 43.7 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 1/93 (1%) Query: 274 TEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAG 332 T+ E E + + A E+L + + +D + Sbjct: 407 TDVSEAEPVTDKEEKQSGQIAEAAENASGAVGNASGAAEILGIIANSDGVTLDALLSACS 466 Query: 333 QPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 E+ L +LE++G I+ GG +++ Sbjct: 467 LSFGELSEILADLEISGTISCGAGGIYTVKKER 499 >UniRef50_C7N591 DNA protecting protein DprA n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N591_SLAHD Length = 319 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 142/300 (47%), Gaps = 16/300 (5%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + E +P L + P L+V G+ AL LAVVG+R + YG+ LF A Sbjct: 18 LSLGEEGFPAALQSIPHPPKELYVVGDPGAL-REGLAVVGARKATPYGKNAASLFAGMAA 76 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 GV + SG A+G D AH+AAL+ G ++ LG G + +P + L +++ GGA+V Sbjct: 77 RHGVVVVSGGAKGCDAAAHRAALEAGGTTVCFLGGGCDMPYPVENFDLFQQVVDAGGAVV 136 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 SE P P Y F RNR+I+GL+K L+VEA L SG+ TA AL ++V +PG I Sbjct: 137 SEHPWTFHPKPYTFRTRNRLIAGLAKATLIVEAGLPSGTFSTADEALSANKDVLVVPGSI 196 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEI-----------LENLQFGLHWLPDAPENSFYSPDQ 303 + S+G + L+ QGA V + E L ++ H ++ S Sbjct: 197 FSATSKGANRLLHQGATPVVDEETFDMLLQSLFPHYLPDVGQQAHLPLFGNVSAASSVAT 256 Query: 304 QDVALPFPELLANVGDEVTPVDVVAERA----GQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + E+ ++ +D + E+ GQ +V + ELE G + P G Sbjct: 257 RKLEGLSLEVFRSLEANPMRMDEIIEKCSEGVGQGPQGIVKAIAELEARGVVERYPDGRF 316 >UniRef50_B2S2Z0 Protein Smf n=3 Tax=Treponema RepID=B2S2Z0_TREPS Length = 302 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 4/284 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFPRKSIESS 63 L L L G + +R++ V + A + +R A LS + Sbjct: 15 LALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHG 74 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + + ++ D + +P L +D P LF G L + +VG+R + G Sbjct: 75 IQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGV 134 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 R F + A G+ I SGLARGIDG HK AL G ++AVL G++ ++PR ++ LA Sbjct: 135 RNSLAFSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLACGVDQLYPRSNSALA 194 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 A ++E GG ++SE+ + Y FP RNR+ISGL++ ++V+EA +SG+L+TA CALEQ Sbjct: 195 ARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPKKSGALITALCALEQ 254 Query: 244 GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 GR+V+ + + +EG L +GA +T +++ ++ ++ Sbjct: 255 GRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYAC 298 >UniRef50_A4W1C0 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=85 Tax=Streptococcaceae RepID=A4W1C0_STRS2 Length = 318 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 76 PADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 + YP L + P LF +G+L L +LAVVG+R S G + + + L+ Sbjct: 111 SILDDIYPLALKQIYNPPVLLFYQGDLELLEKLKLAVVGTRNASKNGIQSVQKIIKELSN 170 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 R I SGLARGID AH A+L+ G +IAV+G GL+ I+P+ + L + + +++ Sbjct: 171 R-FVIVSGLARGIDTAAHIASLKNGGQTIAVIGTGLDNIYPKENKDLQTYIGKHH-LVLT 228 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 E+ PL Y+FP RNRII+GL +G++V EA +RSGSL+T ALE+GREV+A+PG I Sbjct: 229 EYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGREVYAIPGSIM 288 Query: 256 NPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + S+G H LI++GA VT +I+ QF Sbjct: 289 DGKSDGCHHLIQEGAKCVTSGLDIISEYQF 318 >UniRef50_C8WAJ3 SMF family protein n=2 Tax=Atopobium RepID=C8WAJ3_ATOPD Length = 291 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 9/285 (3%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 I ++ E YP +LL P ++ G+ L S ++V+G+R + YG + A Sbjct: 6 ISSEDEDYPSELLLLNHPPEIIYGMGDRSVLQSPCMSVIGARRATPYGIAIAEMAGRCAA 65 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + + SG A G D A AAL G ++ V G G + +P L + E GA++ Sbjct: 66 DNNIVVVSGGALGCDNAAGMAALNAGGKTVVVAGCGADVTYPTTSLDLFEAAREGKGAVI 125 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 S PP Y FPRRN +I+ L K +LV EA L SG++ TA A G+ ++A+PG I Sbjct: 126 SLDRWGTPPRRYAFPRRNAVIAALGKVLLVTEAGLCSGTMSTAEFANSLGKTIYAIPGSI 185 Query: 255 GNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 + S G + LI +GA ++ P+E + L + E + L Sbjct: 186 FSLASAGTNRLISEGAQII--PDETSLGIAISLDYDCLVREQMKQDKKLTPL-------L 236 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV 359 + + + + +A R + V V+ L + E G + +P G Sbjct: 237 SALIASPSRPEELAWRLSENVLTVLNSLTDYEARGMVKRLPDGRY 281 >UniRef50_C2CWR3 Putative uncharacterized protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CWR3_GARVA Length = 504 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 93/350 (26%), Positives = 151/350 (43%), Gaps = 34/350 (9%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNH-HLIPADSEFYPPQLLAT-----TDYPGALFVE 99 + R P W +I +S+++P QL P L+ Sbjct: 155 KKWCLRLKQLPSWDSNQLKRWFSSNGTQWIISPNSKYWPKQLQDLATQCQVAPPLCLWGI 214 Query: 100 GELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G+ +AL + LA+VGSR + YG F ++ A +G T+ SG A GID AH L Sbjct: 215 GDPNALIQCNQPLAIVGSRGCNDYGYELSFTFAKSCAKKGHTVISGGAYGIDAAAHWGTL 274 Query: 158 QV----------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 G +I V GLN + P +A+L ++L GGA +SE D P+A Sbjct: 275 DALDSHVANVNPVGKTIVVFAGGLNKMGPSSNAQLFDAILSSGGACISELCPDTTPVARR 334 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F RNR+I+ ++ V+V +A LRSG+L TA A RE++++PG + +P + G + LI Sbjct: 335 FLLRNRLIAAIASKVIVSQARLRSGALNTANWANSLNREIYSVPGDVTSPSNAGCNMLIH 394 Query: 268 QG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD------- 319 G A+++ +I H+LP + N+ PD +L + + Sbjct: 395 DGKAMMICSQNDIDSIYPNSHHYLPHSLSNNNIIPDT--CNDFQKIVLKAIQECKSKKIC 452 Query: 320 -EVTPVDVVAERAG----QPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 + + + + ++ ++ LEL G + G L R Sbjct: 453 ANIDNIHAIMLHTNSNNDFSISKISGEIAILELNGIVKNQNG-VFSLNRK 501 >UniRef50_C5NW70 DNA protecting protein DprA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NW70_9BACL Length = 296 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 4/287 (1%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL-TLRQAQRFLSFPRKSI 60 + L L++I + + R+ + + I + + + + A+ + ++ Sbjct: 11 EQKRVLLSLVAIEKVTTLKLHRVFNDLNSIEKILDLSVPELAVYFGSNAEEIYTKLHNNM 70 Query: 61 ESSLC-WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGE-LHALHSFQLAVVGSRAH 118 E + E + D +YP + DYP +F G L ++++VGSR + Sbjct: 71 EFDFESYFEFYKVKYMFCDDVYYPKEFFRVYDYPYVIFYRGNKDLLLFRRKISIVGSRNN 130 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + Y + L+ I SGLA G+D +AH+ AL+ G +I V+ +G N I+P + Sbjct: 131 TSYSKDALDCIVPYLSMNNFVIVSGLATGVDSLAHEGALKSKGYTIGVIAHGHNIIYPEQ 190 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 +L LE+ ++SE+ P Y F RNR+++GLS +LV EAA RSG+ T Sbjct: 191 SYKLYKE-LERNHLIISEYFPTSPIRKYKFLERNRLVAGLSSALLVTEAAKRSGTQRTVD 249 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 AL+ G +VF LPG G+ S + IK+GAILV + E+ + L F Sbjct: 250 FALDVGSDVFCLPGKFGDKMSYAMNEYIKEGAILVNKLEDFGDELGF 296 >UniRef50_D2Q9H9 Smf protein n=8 Tax=Bifidobacterium RepID=D2Q9H9_9BIFI Length = 422 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 100/384 (26%), Positives = 148/384 (38%), Gaps = 39/384 (10%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP 70 + +L + I W + G QR + P + CW Sbjct: 33 AACKALDAAFINGITRWGRTINARGMSSFH--GSLASWQQRLATLPSHDPQQLECWFTAA 90 Query: 71 NH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYG 122 +I ++P QL P L+ G+ AL + +VGSR S YG Sbjct: 91 GTQWIIAPHHPYWPSQLADLSLRTDWAAPLCLWGRGDPEALVSCPKPVGIVGSRGVSDYG 150 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVLGNGLNTI 174 + A G T+ SG A G D AH AL +G ++AV GLN I Sbjct: 151 RQCAFELARQAARAGHTVVSGGALGTDAAAHWGALAAMDEVGAGISGRTVAVFAGGLNHI 210 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P+ +ARL +++ GALVSE P A F RNR+I+ LS V+V +A RSG+L Sbjct: 211 GPKSNARLFERIVDGKGALVSELCPATIPEARRFLLRNRLIAALSSTVIVAQARARSGAL 270 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDA 293 TA A E RE++A+PG + P + G + LI+ G A +V +I E A Sbjct: 271 NTAGWAGELNRELYAVPGDVTMPHNTGCNRLIQDGKASIVCSLSDIGELCHEAHRPHITA 330 Query: 294 PENSFYSPDQQDVALPFP---------ELLANV-----GDEVTPVDVVAERAG------Q 333 + P D ++L + D + + Sbjct: 331 SSKAEDLPPSDDPDHCKEDDGTNTAGNDILHAIRACRSRYGTVSADGILDMLNESHPDEY 390 Query: 334 PVPEVVTQLLELELAGWIAAVPGG 357 + ++ +L LEL+G I G Sbjct: 391 SIAAIMQELGALELSGIITMEAGR 414 >UniRef50_Q6GHI6 SMF family protein n=43 Tax=Staphylococcus RepID=Q6GHI6_STAAR Length = 290 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 135/272 (49%), Gaps = 14/272 (5%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 I + WV ++ ++ + R+ F+ I L L+ Sbjct: 30 IKEGGRKKDSYLCEWVNREENVHLL---------RKYYAFIKLDHNDIIKELQKLK---V 77 Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCE 131 I YP L +P LF G + +++ LAVVG+R + Y ++ Sbjct: 78 SYITYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLS 137 Query: 132 TLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG 191 ++ +TI SGLA+G D +AH+ AL+ N +IAVL G T +P+ L + E+ G Sbjct: 138 NDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTHYPKSTLALRNKI-EEIG 196 Query: 192 ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALP 251 ++SE+P P Y FP RNRIISGLSKGVL+ EA +SGS +T ALEQ R V+ LP Sbjct: 197 LVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHITIDFALEQNRNVYVLP 256 Query: 252 GPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G + NP ++G I++GA +V +I E+ Sbjct: 257 GSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_Q6AEB0 DNA processing factor n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AEB0_LEIXX Length = 411 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 24/368 (6%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHI----DAVVLQQTGLTLRQAQRFLSFPR-----KS 59 + +++L +R + L + R L R S Sbjct: 55 AVALLTALGARRTLRAVALGESGESVRERTLRSEAHDPALNAERINRALQRWRTRLGQDS 114 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALH--SFQLAVVGSR 116 +L L+ DS F+P L + P AL+V G+ +L +++VGSR Sbjct: 115 PARALHRAHLLRVTLVLPDSPFWPSGLDSLEHGRPLALWVRGDPSSLSGLRRSISLVGSR 174 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 + YG L+ RG I SG A GID AH+AA+ + +++ L G + ++P Sbjct: 175 TATGYGTHVALESSAGLSDRGFAILSGGALGIDAAAHRAAIASHRLTVCSLAGGADRLYP 234 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + L +L G +++E P P + F RNR+I+ +S+ +V+EA RSGSL T Sbjct: 235 AANTELLTRILAS-GLILAELPPGSAPTRWRFLMRNRLIAAVSQATVVIEAGRRSGSLNT 293 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPE 295 A A + GR + A+PGP+ +P S G H LI++ A VT EE+ E PD Sbjct: 294 AGHAAQLGRPLGAVPGPVTSPESAGCHRLIREYAATCVTSAEEMAELADPFTVAGPDPVA 353 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + ++++ VA R G E+ L + G Sbjct: 354 EPVDTRILRELS----------RTAPRSRIDVAARTGIEPAELSAALGRMSALGLAIESA 403 Query: 356 GGYVRLRR 363 GG+ ++R Sbjct: 404 GGWRAVQR 411 >UniRef50_Q2YXL9 DNA processing protein n=5 Tax=Staphylococcus RepID=Q2YXL9_STAAB Length = 290 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 10/285 (3%) Query: 8 LRLMSI-SSLYGDDMVRIAHWVAKQSHIDAV-----VLQQTGL--TLRQAQRFLSFPRKS 59 + L I S + + +D + L + + + S Sbjct: 5 ILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRYKEIS 64 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAH 118 ++ +++ + I YP L T +YP LF + ++ L +S LAVVGS Sbjct: 65 VDEIETTIQKTQLNYITCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVGSPLS 124 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 Y + + + SGLA+G D +AH+ AL+ N +IAVL G T +P+ Sbjct: 125 GDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTHYPKS 184 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 L + E+ G ++SE+P P Y FP RNRIISGLSKGVL+ EA +SGS +T Sbjct: 185 TLALRNKI-EEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHITID 243 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 244 FALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 288 >UniRef50_B8JES7 DNA protecting protein DprA n=4 Tax=Anaeromyxobacter RepID=B8JES7_ANAD2 Length = 320 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 147/295 (49%), Gaps = 9/295 (3%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + + YP +L + PG L V GEL + +A+VG+RA YGE R Sbjct: 31 SLDARTLRPGDGHYPERLARLAEAPGQLRVRGELGT-AACSVALVGARATDEYGELLARD 89 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 LA GV++ SG A G+D AH+ AL+ G ++AVLG G++ ++PR+H L +LE Sbjct: 90 LAAGLARAGVSVVSGGAVGVDAAAHRGALEAGGHTVAVLGTGVDVVYPRQHRALFEGILE 149 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GGALVSE P P L +FP RNRII+ L+ V+VV A SGSL+TA A QG +VF Sbjct: 150 TGGALVSELPDGSPGLPRHFPARNRIIAALADAVVVVRARPGSGSLITASWARAQGVKVF 209 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVAL 308 A+PG + + S GP L+++GA + + ++ + + Sbjct: 210 AVPGDVRDALSAGPLALLREGAGVASSAADV--------LAGLGLAAAAPVQAPLPALDD 261 Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 LL +G D +A AG PV + LL LEL G PG Y R Sbjct: 262 RGTALLRALGRRPRHADELAREAGIPVGAALAGLLTLELEGLCEQRPGHYFLRRS 316 >UniRef50_B3WEA3 DNA processing protein n=8 Tax=Lactobacillus RepID=B3WEA3_LACCB Length = 271 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 88/285 (30%), Positives = 129/285 (45%), Gaps = 16/285 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M L + V + +R + + Sbjct: 1 MTLRNFLLAWHIATRQNPRMAVAL-------EQAIRGKDDLAPFQAELKKRLTDQYSQQL 53 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 + + + YPP+L P LF G+ L+ L +VGSR + Sbjct: 54 ------IAAKHVPFMTYVDAAYPPRLREIPQPPLVLFYRGQSGLLNQLTLGIVGSRRATG 107 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 Y L + + I SGLA G D +AH+AAL +IAV+ NGL+ ++P ++ Sbjct: 108 YSATALAQLLPQLPS--MVIASGLAAGADAMAHEAALSARLPTIAVIANGLDQVYPAKNR 165 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L + G ++SE+P P + F RNRII+G++ GV+V EA ++SGSL+TA A Sbjct: 166 DLQVQI-AHVGLVLSEYPPATGPQRFQFVARNRIIAGIAHGVMVTEAEMKSGSLITANYA 224 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 L+ REVFALP I P G + LI+ GA LVT PE ++ENL F Sbjct: 225 LQHNREVFALPNRIDAPLGAGTNALIQAGAALVTGPETLVENLNF 269 >UniRef50_Q38WY7 Putative DNA processing protein, DprA/SMF family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38WY7_LACSS Length = 288 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 144/293 (49%), Gaps = 16/293 (5%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 ++ L++ + +R+A W++ + + L + Q R + + Sbjct: 3 TKNQLLLKVHLAAGFGTISELRLAAWLSTSHN-----WALSALEIAQIARLPERYWPTFQ 57 Query: 62 SSLC--WLEQPNH------HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 +S L++ + + YP +LL T P LF G+L L LAVV Sbjct: 58 ASFQSTTLQRQCIDHEVRTTYLTILDKDYPQRLLETYLPPVLLFYRGDLRLLKQPCLAVV 117 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R + Y ++ + L TI SGLA+G D +AH+ ALQ I V+G G+N Sbjct: 118 GARQATHYSKQSLEQLLQGLTA--TTIISGLAQGADAMAHEVALQRGLAPIGVIGTGINC 175 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P ++ L ++ + G L+SE+ L P Y FP RN+II+GL ++V EA +SGS Sbjct: 176 SYPPQNEHL-QQVVAEKGLLLSEYALGTPARRYQFPARNKIIAGLCHSLIVTEARHKSGS 234 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFG 286 L+TA AL+ R V+A+PG I S+G + LI GA + + ++E L++ Sbjct: 235 LITANLALQANRNVYAIPGRIDQSLSQGCNQLIAAGATPLLDKNILIEELRYF 287 >UniRef50_Q5HPU3 DNA processing protein DprA, putative n=6 Tax=Staphylococcus epidermidis RepID=Q5HPU3_STAEQ Length = 290 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 121/237 (51%), Gaps = 2/237 (0%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + R ++ F + + +++ N + YP DYP +F +G Sbjct: 50 SERLWNKYERFKELKLMDIIKEMKKANVSFTTYFDDNYPSLCKEMYDYPYVIFYKGNPQF 109 Query: 105 L-HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 HS LAV+GSR + Y + + + I SGLARG D VAH+ AL+ + Sbjct: 110 FNHSHSLAVIGSRNATQYTSQSLNYLFPSFRQLNMAIVSGLARGADSVAHQTALKYLLPT 169 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I VLG G +P+ L +E+ G ++SE+P P + FP RNR+ISGLS+GVL Sbjct: 170 IGVLGFGHCYHYPKATLNLRTK-VERNGLVISEYPPFSPISKHKFPERNRLISGLSRGVL 228 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 + EA RSGS +T CALEQ R V+ LPG + N ++G I +GA +V + IL Sbjct: 229 ITEAEERSGSQITIDCALEQNRNVYVLPGSMFNKMTKGNLRRINEGAQVVIDESSIL 285 >UniRef50_A9R928 DNA protecting protein DprA n=1 Tax=Yersinia pestis Angola RepID=A9R928_YERPG Length = 247 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 115/238 (48%), Positives = 146/238 (61%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M+ E+WLR+ + L +A + I L GL +Q +F + I Sbjct: 1 MLAAELWLRMTQVKGLGVVKRSALAKRLLASGDIHPGRLAAYGLDSQQCHQFAQLSPRYI 60 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 +L WL PNHHL+ YPP+L+ P LFV GEL L+ Q+A+VGSR S Sbjct: 61 ADTLEWLSDPNHHLLTYGEPGYPPRLVHIAGAPLVLFVSGELDVLYRPQIAMVGSRHFSH 120 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 YGE+WGR F LA G+ ITSGLA GIDG+ H+AAL + G +IAVLG+GL I+P+RH+ Sbjct: 121 YGEQWGRYFASELARTGLVITSGLAVGIDGICHQAALNIQGRTIAVLGSGLENIYPQRHS 180 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 RLA + QGGALVSEF P+A +FPRRNRIISGLS VLVVEA L+SGSL+ R Sbjct: 181 RLAKEIEYQGGALVSEFLTTALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLIVPR 238 >UniRef50_B7GSU6 SMF family protein n=5 Tax=Bifidobacterium longum RepID=B7GSU6_BIFLI Length = 566 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 126/337 (37%), Gaps = 32/337 (9%) Query: 9 RLMSIS-----SLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 L I L A+ + + A R + P + I Sbjct: 86 ALSRIDRMFVDGLTRWGRKASANAMRSFRNALA----------GWHNRMMDLPSQDIIQL 135 Query: 64 LCWLEQPNH-HLIPADSEFYPPQLLAT-----TDYPGALFVEGELHAL--HSFQLAVVGS 115 W +I +P QL P L+++G+ AL + + +VGS Sbjct: 136 ADWFTMDGTQWIIGPGHPCWPSQLADLSIRSDWAPPLCLWIKGDPRALTSCAKPVGIVGS 195 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV--------NGVSIAVL 167 R + YG E A G + SG A G D AH AL G ++AV Sbjct: 196 RDVTEYGRYVAHTVAEQAAVAGHLVVSGGAMGTDAAAHWGALNALHGRMPANVGRTVAVF 255 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GLN I P R+ L + QGGAL+SE P A F RNRII+ +S ++V +A Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPGTIPEARRFLLRNRIIAAMSSTLIVTQA 315 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 LRSG+L TA A E REV+A+PG I P + G + +I ++ E++ Sbjct: 316 RLRSGALNTAGWACELLREVYAVPGDINQPCNAGCNKMIGDHRAMILCAATSTEDICHER 375 Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 H QD + E + Sbjct: 376 HKPVMGACPGISKSTGQD-SSENEEAMEVPATTPLSP 411 >UniRef50_A6L5R8 Putative DNA processing enzyme DprA n=5 Tax=Bacteroidales RepID=A6L5R8_BACV8 Length = 326 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 18/315 (5%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWV--AKQSHIDAVVLQQTGLTLRQAQRFLSFP----R 57 TE+ L L + + + S I + L ++ Q Sbjct: 5 TEMILTLQQLDGIGNKTIFNQIAKYVTNTISQISQLCEFWITLKGKKIQAITEDDLYKAH 64 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLAT------TDYPGALFVEGELHALHSFQLA 111 + ++ N +I YP L + D P L+ +G L AL +A Sbjct: 65 DVALRIIERCKEENVGIISYYDSKYPEILKSCTNEDGKIDPPLILYYKGNLEALRKPGVA 124 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++G+R + G + G F A RG I SGLA G D H+ AL V G + A L NGL Sbjct: 125 IIGTREPTPNGIKAGLHFSREFAKRGYNIVSGLAIGCDATGHQGALSVGGTTTAFLANGL 184 Query: 172 NT--IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 + I+P+ + LA ++ GG L+SE+P+ Y+ R+R+ +GLS +V++ + Sbjct: 185 DWASIYPKENLSLAKEIVSNGGLLLSEYPVGQSCGRYSLVARDRLQAGLSYATIVIQTGI 244 Query: 230 RSGSLVTARCALEQGREVFALP----GPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 + G++ + + +FA+ + +G L+++G EI E Q Sbjct: 245 KGGTMHAVNATINSQKPLFAVEFKNNEDTISEKVQGNLKLVQEGQAHPLRSSEIDEAKQL 304 Query: 286 GLHWLPDAPENSFYS 300 ++ A +N S Sbjct: 305 IESYINKAKQNQQES 319 >UniRef50_D1NRZ7 DNA protecting protein DprA n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRZ7_9BIFI Length = 481 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 141/373 (37%), Gaps = 41/373 (10%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLL 87 +R +FP ++ + W+ ++ A +P QL Sbjct: 110 GTSPDAVKRHASFQRALKGWLRRRAAFPERTAQDWHEWITVSGTAWVVTASDPLWPAQLE 169 Query: 88 AT-----TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 P L+ G++ AL LA++GSRA S YG + G + Sbjct: 170 DLRLHASWAPPLCLWGRGDVRALTACPAPLAIIGSRAVSDYGAHVAQTLAGQAVRAGHAV 229 Query: 141 TSGLARGIDGVAHKAALQV------------------NGVSIAVLGNGLNTIHPRRHARL 182 SG A GID AH A+ G +IAV GLN I P +ARL Sbjct: 230 VSGGAMGIDACAHWGAVDALAAACDGQASLLDSASMPCGPTIAVFAGGLNHIGPSTNARL 289 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + GAL+SE P D P+A F RNRII+ LS + V +A +RSG+L TA A E Sbjct: 290 FEHIQTWHGALISEMPPDCAPVARRFLMRNRIIAALSSVICVAQARVRSGALNTAHWAQE 349 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQGAILV----TEPEEILENLQFGLHWLPDAPENSF 298 RE++A PG I G H LI + A + ++I P Sbjct: 350 LNRELYATPGLITRADHTGCHTLIDEQAARILQSCEHIDDICHERHAPHWPSVAEPTADT 409 Query: 299 YSP--DQQDVALPFPELLANVGD--------EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + D++ +L V + + E + +P V L LE+ Sbjct: 410 TADTMQPADLSDNERIVLDAVRQCHRQRVVATASAIGQYCEAS-VAMPVVFAALGALEMR 468 Query: 349 GWIAAVPGGYVRL 361 G IA G + L Sbjct: 469 GLIANNNGAFAIL 481 >UniRef50_Q3AMD3 Putative DNA processing protein (Smf family) n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AMD3_SYNSC Length = 338 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 121/294 (41%), Gaps = 19/294 (6%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALH----SFQLAVVGSRAHSWYGERWGRLFC 130 + +P L P L+VEG+ L +AVVG+R+ S +G Sbjct: 60 LLPGDPAWPSCLDQMHLPPSGLYVEGDRSLLRHINARTAIAVVGTRSASDHGLAMAEELG 119 Query: 131 ETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQG 190 LA G + SGLA G+D AH+ L NG I VLG L+ ++P H L + Q Sbjct: 120 RALAEAGWPVFSGLAEGVDAAAHRGCLARNGAPIGVLGTPLDRVYPAHHRSLQQQVGRQ- 178 Query: 191 GALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL 250 G LVS +F RNR + ++ ++VVE RSG+L++AR A V+ + Sbjct: 179 GLLVSPSRSGCRVRPGHFAARNRWLVAFAQALVVVECQQRSGALISARWASRMHYPVWVV 238 Query: 251 PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPF 310 PG G + L++ GA + PE++L ++ G ++ Sbjct: 239 PGDARRWSCRGSNALLRDGATALIHPEDLLASIGEGPLRSEESRGK-------------H 285 Query: 311 PELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 L+ +G D + E+ QLL LE + G + R R Sbjct: 286 QRLMEAIGSGA-TFDQLVLCLQCSPAELAPQLLALECRRELLCESGLHWRKPRP 338 >UniRef50_C6HWU9 Putative DNA processing protein DprA n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWU9_9BACT Length = 292 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 117/241 (48%) Query: 43 GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL 102 + ++ + + L E+ ++ YP +L + P LFV G+ Sbjct: 50 RILADLSRPERDVLAERLLILLDKAERLGLKMMHPGHPDYPSRLGTLSAPPFFLFVRGDA 109 Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 L +AVVG+R + L+ G+ + SGLARG+D AH+ AL+ Sbjct: 110 TILDRPLVAVVGAREAGRESLLEVTGLSKNLSEAGLVVVSGLARGVDAAAHRGALEAKRP 169 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 ++AV+G GL+ ++P + LA + GG ++SE+P P ++FP RNRI++GLS V Sbjct: 170 TVAVVGTGLDRVYPPENVGLAREIERTGGLILSEYPPGSGPDGWHFPHRNRIVAGLSLAV 229 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN 282 + RSG+ VTAR ALE+GRE+ EGP L +GA E++E Sbjct: 230 IAGPHRRRSGTYVTARIALEEGRELLVFDRGARGWECEGPALLEGEGAKRAGSAMEVMEA 289 Query: 283 L 283 L Sbjct: 290 L 290 >UniRef50_B7CD50 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD50_9FIRM Length = 243 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 6/208 (2%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I + YP P +F +G+++ L + +VG+R S + + L Sbjct: 41 YITIMDDAYPDAFKRLRYPPWIIFYQGDINLLKEKGVGIVGARNCSTQALQNTDRIVQRL 100 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 I SGLA+GID AH A +I VLG G+N I+P+ + L + + G + Sbjct: 101 -QSKYVIVSGLAKGIDARAHYNAT----KTIGVLGCGINVIYPKENTYLFERM-KNNGLI 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P+ V PLAY+FP RNR+I+ LS ++V+EAA +SG+++T LE ++ +P Sbjct: 155 ISEYPMHVKPLAYHFPWRNRLIAALSDSLVVIEAAYKSGTMITVNECLELSVPIYCVPTA 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEILE 281 + +G ++LI GA ++ + +++ + Sbjct: 215 FQDEKHQGCNYLISNGANILVDIKDVDD 242 >UniRef50_C6WBB2 SMF family protein n=2 Tax=Actinomycetales RepID=C6WBB2_ACTMD Length = 314 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 9/290 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPR---- 57 + L L + + + R A + + + +A + L Sbjct: 5 EEQLRLLALCKVKDVNWYLIAREAQRPGGVDRLWKALPLEASADATKAIKALKPLNGATD 64 Query: 58 ---KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 ++ + + + + L+ + +PP L + P LFV G + +AVVG Sbjct: 65 EYIAMAQAEVDKVREDDVRLVTVLDDEFPPNLRLIPNAPPFLFVRGTMTDADLRSVAVVG 124 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S G + L RGVT+ SGLARGID AH A L+ G +IAV+G G+N Sbjct: 125 TRDASEAGRQRAGRMARELVERGVTVVSGLARGIDTAAHTATLKAGGRTIAVIGTGINRY 184 Query: 175 HPRRHARLAASLL-EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 P + L + + GA+VS+F D + FPRRN +SG+++G +V+EA SG+ Sbjct: 185 FPAENRVLTDKIATDGQGAVVSQFWPDASGATWTFPRRNITMSGIAQGTVVIEAGSTSGA 244 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + AR ALE G++VF + ++ +GA+ V + + + + L Sbjct: 245 KMQARVALEHGKKVFLIKSLTEQQEWAR-KYVETRGAVQVEDVKAVADAL 293 >UniRef50_A8RBU6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBU6_9FIRM Length = 242 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 11/248 (4%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 I ++ G Q L + + + + YP L Sbjct: 3 EQILCYAIRYHGEWHAIKQAILR------NEEWERCDYDGY-YVTIYDKEYPQCFLQLEY 55 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF G L AV+GSR + + + LA R I SGLA+GID Sbjct: 56 PPWILFYAGRLELCSLPSCAVIGSRMPTQRSIHITQQVVKQLADR-YVIVSGLAKGIDAG 114 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 AH AA N +I V+G GL+ ++P+ +ARL A + + ++SE+P PLAY+FP R Sbjct: 115 AHTAA--CNKHTIGVIGCGLDVVYPKENARLYAYMKQSQ-LILSEYPKGTKPLAYHFPWR 171 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NR+I+ LS ++V+EA RSG+L+T AL + ++ +P +P G + LI QGA Sbjct: 172 NRLIAALSDSIVVIEAKKRSGTLLTVNEALNLSKPIYCIPHAFADPAGYGCNLLISQGAN 231 Query: 272 LVTEPEEI 279 ++ + +I Sbjct: 232 ILVDETDI 239 >UniRef50_Q1MY05 SMF protein n=1 Tax=Bermanella marisrubri RepID=Q1MY05_9GAMM Length = 314 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 19/311 (6%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL 53 M E W L L +I + + +IA I ++ + + + Sbjct: 1 MHSKEYWKNETIAFLALANIKGVGFRTLQKIASNGLGFKSILKSDSKEE--LQKHIKAKI 58 Query: 54 SFPRKSIESSLCWLEQ----------PNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 + + L + LI + E YPP L D P LFV+G L Sbjct: 59 DPNKSWHDFQLEAWAKGIELARELSAQQTRLIFLNEECYPPLLKKIPDPPYWLFVQGNLD 118 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 +L+ +A+VG+R + G + +A++ TI SGLA GID AHKAAL+ N + Sbjct: 119 SLNEKPVAIVGTRKPNEDGILLTSIAVAGIASKNRTIISGLADGIDQTAHKAALKYNLKT 178 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVLGNGL+ +P +L + ++ GGA+V+E+ + A NF +RNRI +GLS+ ++ Sbjct: 179 VAVLGNGLSIDYPAGSEKLKSEIINSGGAIVTEYLPNQTYSAENFVKRNRIQAGLSETII 238 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 + + SG+ T A++ R++ L P G ++I + P E E L Sbjct: 239 PAQWKVNSGTGHTVNFAIKYDRKIAGLKLPNQFHGCSENEYIISANGQVFELPIETREFL 298 Query: 284 QFGLHWLPDAP 294 + Sbjct: 299 HYLDQPRQPIQ 309 >UniRef50_B9YAX5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX5_9FIRM Length = 260 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 3/206 (1%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 + YP L P LF +G L +VGSR YG C L Sbjct: 38 YVTWADAEYPALLRQLRFPPWILFYQGNLALADLPATGIVGSRRACRYGLTMTERCCGAL 97 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 + I SGLA GIDG AH+AAL++ +I + G GL+ +P + L L + L Sbjct: 98 --KDEVIVSGLALGIDGAAHRAALRLCRGTIGIAGCGLDRPYPAYNRDLYTELPKAN-LL 154 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P PPL ++FP RNR+I+ LS ++V++A SG+++T A+E REV+ LP P Sbjct: 155 LSEYPPQTPPLKHHFPWRNRLIAALSDRIVVMQAGFHSGTMLTVNEAIELNREVWCLPYP 214 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEI 279 N EG + LI QGA ++ EP ++ Sbjct: 215 AMNKEGEGCNLLISQGAEILMEPSQL 240 >UniRef50_C8P0K1 DNA processing protein DprA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0K1_ERYRH Length = 259 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 4/206 (1%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 I YP P +F EG L L+ +AV+GSR S Y R F Sbjct: 55 YICYGDRAYPSSFYELDCPPFVIFYEGNLSFLNEQCIAVIGSRTPSEYALRMTEDFVGN- 113 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 TI SGLA GID AH+AAL SIAV+G GL+ +P +H + ++ + Sbjct: 114 VREHYTIVSGLAYGIDITAHRAALDFQ--SIAVVGCGLDICYPSKHRVEFEFM-KKNHLV 170 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 +SE+P V P + FP RNR+I+ LS+ V V+ A +RSG++ T AL+ R V LP Sbjct: 171 ISEYPKGVHPHKHYFPFRNRLIAALSQSVYVMSAFVRSGTMHTVNEALKLNRRVICLPHN 230 Query: 254 IGNPGSEGPHWLIKQGAILVTEPEEI 279 + + G + LI++GA ++T E++ Sbjct: 231 LDDITGAGCNLLIQEGAEVLTNLEDL 256 >UniRef50_B1YIL5 DNA protecting protein DprA n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YIL5_EXIS2 Length = 275 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%) Query: 22 VRIAHWVAKQSHIDA--VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 + A + V+++Q GL + + + +L L+Q +L+ Sbjct: 3 RELYARFATCRVPYSIVVLIEQYGLLPVEDLPVSRSIKNRYQQALQ-LDQVPTNLLVPGD 61 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 ++P LL LF G+ L ++++GSR S + F Sbjct: 62 PYFPMPLLQIPQPVYGLFFSGDPSLLRQPMISIIGSRQPSPSHSKRL-SFLRPFFESPFV 120 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 SG A GID + H+ +L+ + +IAVL +G + ++P RHA L + +Q G L+SE+P Sbjct: 121 TVSGGALGIDSLVHRLSLKHHQATIAVLASGFDFLYPARHAPLFQRI-QQDGLLLSEYPA 179 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 P + F RNRIISGL+ G+++VEA +SG++ TA ALEQG++V+ +PG Sbjct: 180 PTPVKKHQFLERNRIISGLASGLIIVEATRKSGTMNTAGHALEQGKDVYCIPGCPTEKHF 239 Query: 260 EGPHWLIKQGAILVTEPEEI 279 +G + LI +GAI + PEE+ Sbjct: 240 QGTNQLIAEGAIPLLNPEEV 259 >UniRef50_UPI000185BF27 smf family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BF27 Length = 378 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 100/353 (28%), Positives = 154/353 (43%), Gaps = 21/353 (5%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + W L + +VR+ + + GL + R + Sbjct: 1 MDEIHAWAYLNRVVEATHPQIVRLVTEFGPVEVA-ERIKARAGLPEGLLN--TTQARADV 57 Query: 61 ES---SLCWLEQPNHHLIPADSEFYPPQLLATTD----------YPGALFVEG-ELHALH 106 + L LI +P +LL+ P AL+V G +L + Sbjct: 58 DQSGHDLESAAAMGWRLIYPGHPEWPGELLSCFTTLEVRDRADAPPLALWVRGRDLREML 117 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 S +A+VG+R S YG + F A GV + SG A GID AH+AAL G ++ V Sbjct: 118 SEAVAIVGTRMASSYGTQVAAQFAGQFANAGVGVISGGALGIDAAAHRAALDAGGTTVVV 177 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G+ +PR HA L + E+ GALV+E+P V P + F RNR+++ LS+ +VE Sbjct: 178 GAGGVGVDYPRTHAELFDRIAER-GALVTEYPPGVRPARHRFLTRNRLVAALSRATTIVE 236 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 A RSG+ TA A+ + + A+PGP+ + G H LI+ G A+LV + + + Sbjct: 237 AGWRSGARNTAHWAVRLNKPLGAVPGPVTLQTTSGCHDLIRSGEAVLVCSADNVRSLYRS 296 Query: 286 GLHWLPDAP-ENSFYSPDQQDVALPFPELLANV-GDEVTPVDVVAERAGQPVP 336 DA E + Q ++ + ++ E TPV VA +AG V Sbjct: 297 VGTVNEDAQLELLWEKSAVQKLSRNELAVFDSLNSAEPTPVGEVAAQAGLAVA 349 >UniRef50_B0REP0 Putative DNA-binding/uptake protein n=2 Tax=Clavibacter michiganensis RepID=B0REP0_CLAMS Length = 478 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 93/315 (29%), Positives = 140/315 (44%), Gaps = 24/315 (7%) Query: 71 NHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALH--SFQLAVVGSRAHSWYGERWGR 127 ++ +P P L+ G A+ S +A+VG+RA + YGE Sbjct: 162 GARVLVPGDPHWPVGADDLGPHSPLVLWCTGAPDAMAALSRSVAIVGARAATGYGEHVTA 221 Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 L R V + SG A GIDG AH+AA+ G ++A L G++ ++P HA L A + Sbjct: 222 ELAAGLVDRDVAVVSGGAYGIDGAAHRAAIGSAGRTVAFLAGGVDRLYPSGHAELFARM- 280 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 + GA+VSE P P + F RNR+I+ S +VVEA RSGSL TA A+ R + Sbjct: 281 RRDGAVVSELPCGASPTRWRFLLRNRLIAAASAATVVVEAGARSGSLNTANHAIALERPL 340 Query: 248 FALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDV 306 A+PGP+ + S G H L+++ A+ +T +++++ + E +D Sbjct: 341 GAVPGPVTSASSSGCHRLLRESQAVCITSADDVMDLVPGWSGAGTQVQEPGSAHASSRDT 400 Query: 307 ------------------ALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELEL 347 +L + VA RAG V E + L LEL Sbjct: 401 PSGAADDRVGARAAEDRGDSRVVRVLDALAVRRGRGTADVAARAGLGVAETSSVLGMLEL 460 Query: 348 AGWIAAVPGGYVRLR 362 G +A GG+VR Sbjct: 461 EGTVARPDGGWVRRP 475 >UniRef50_B0A8E5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8E5_9CLOT Length = 304 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 20/305 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW--VAKQSHIDAVVLQQTGLTLRQAQRFLSFPR- 57 M ++ L L I + + K + ++ + + ++ P Sbjct: 1 MNNS---LILTVIDLIGKRKTENLIEKGFFNKSTELNEKEILECIERYKERDSAFKVPSL 57 Query: 58 -------KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQ 109 ++ E L + I ++ +P +L D +F +G L+ L+ Sbjct: 58 DKIKATMENSEQILLKSRELGIKCISIFNDNFPDKLKNIKDKSILIFYKGNLNCLYEDKS 117 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A++G+R + G++ G E A G + SGLA G D H+ L + G ++A L Sbjct: 118 IAIIGTRTPTERGKKIGEALGEYYAKEGFIVVSGLASGCDTYGHRGCLNMKGQTVATLPC 177 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ +P + L +LE G L+SE+ + P F +R+R+ + LS GV+VVE A+ Sbjct: 178 GLDKYYPPENCDLGDEILENEGCLISEYKIGTNPSKIRFIQRDRLQAALSLGVVVVECAI 237 Query: 230 RSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQ 284 G++ T + A + +++ A+ + +G +LI+ AI ++ E+ + Sbjct: 238 ECGTMHTVKFAQKYNKKL-AVSLHDEVNLDIETIKGNLYLIENSDAIGLSNIEDYKKYKD 296 Query: 285 FGLHW 289 ++ Sbjct: 297 ILINN 301 >UniRef50_A9WP58 SMF family protein n=2 Tax=Micrococcaceae RepID=A9WP58_RENSM Length = 323 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 95/320 (29%), Positives = 138/320 (43%), Gaps = 10/320 (3%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGELHALHSF-QLA 111 P+ + E L + L+ + +P L P L+ G +A Sbjct: 7 RLPQVAAERDLTTMASIGGGLLIPEDAAWPAGLKDLGLAAPIGLWFRGTSGLPALSDCVA 66 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV----SIAVL 167 VVGSR + YG LA R T+ SG A GID A++AAL +IAV+ Sbjct: 67 VVGSRDSTAYGNAVVADIAHGLAVRRKTVLSGGAYGIDAAANRAALTAKSAESVATIAVM 126 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GL+ +P + L + Q G L++E P P Y F +RNR+I+ LS +VVEA Sbjct: 127 AGGLDRFYPAGNELLLREI-SQSGLLLAEVPPGCNPTRYRFLQRNRLIAALSSATVVVEA 185 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQFG 286 RSG+L TA A E GR V A+PG + + S G H L+++G A+ V++ EI E + Sbjct: 186 RWRSGALNTAHHAAEMGRHVAAVPGSVYSANSAGCHRLLREGAAVCVSDAAEICELISPS 245 Query: 287 LHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELE 346 P + L + L + V+ +A AG V L LE Sbjct: 246 GVLSPMHIPDRAEHDGLPAEDLLLLDALPV--RRGSSVEKLAGVAGLDEASVRAGLGRLE 303 Query: 347 LAGWIAAVPGGYVRLRRACH 366 L G++R R + Sbjct: 304 LLELAKRSENGWLRRRPSST 323 >UniRef50_D0LR98 SMF family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LR98_HALO1 Length = 297 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 130/294 (44%), Gaps = 21/294 (7%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCET 132 + D YP +L A L V G + +AVVG RA + R F Sbjct: 8 LRPDDAAYPERLHALPPERPTLQVRGAIAPWARAARSIAVVGLRAATARDVERARGFGRD 67 Query: 133 LATRGVTITSGLARGIDGVAHKAALQ-----VNGVSIAVLGNGLNTIHPRRHARLAASLL 187 +A G + SG A G+D AH+ AL+ GV+ VLG G++ ++P RH L + Sbjct: 68 IAASGAAVISGGALGVDAAAHRGALEVAAQPGAGVTAVVLGCGIDVVYPARHRALYHEVC 127 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GGAL+SEFP PP +F RRN I+ L+ VLVV A RSGSL TAR A + GR V Sbjct: 128 ASGGALISEFPEAAPPRPGHFVRRNTTIAALADAVLVVAAGARSGSLHTARAARKLGRLV 187 Query: 248 FALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 A+PG G L+ GA+ V EP + + L + A + A Sbjct: 188 AAVPGTP------GCERLLADGAVAVREPNHLWDALAGRVRAPEVALPSPGSDAALVLAA 241 Query: 308 LPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 L L D +AERAG L+ LEL G A+PG Sbjct: 242 LDARRGLD--------PDQLAERAGLSARACARALIGLELCGLAVAMPGQSYAR 287 >UniRef50_C4FX97 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX97_9FIRM Length = 308 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 10/301 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL------S 54 M + I L L + Y + + H + H DA+ L LR+ Q+ S Sbjct: 11 MKEQLILLSLEGAN--YREIWYYLKHAIKSACHRDALQLADCQAMLREVQKEAGVLVNPS 68 Query: 55 FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 F + +++ ++ + YP L P ++ G + L +++VG Sbjct: 69 FHFYLDDQHYVRIKELANYSLMIGERLYPSAWLEIPKPPLLVYFRGHIEWLQEPLISIVG 128 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-NGVSIAVLGNGLNT 173 +RA S G+R + L G SG+A G+D + H+ AL G +IAVL G T Sbjct: 129 TRAISSQGQRDASSLTQALCQAGYVCVSGMALGVDAMVHRTALSCPGGKTIAVLPAGFGT 188 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +PR HA L L + L+SE+ + ++F RNR+++G++ ++VVEAALRSGS Sbjct: 189 CYPRSHASLMNELGQSN-LLLSEYQPHIGIKKHHFIMRNRLVAGIAPALVVVEAALRSGS 247 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 L+TA AL+ RE++ PG + + S G + LI+ GA + + + +L+ Sbjct: 248 LITANFALQYNREIYVCPGHLSDANSAGCNQLIEAGANAIYSLPDFMGDLETLYRLQAIK 307 Query: 294 P 294 Sbjct: 308 N 308 >UniRef50_C7N822 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N822_SLAHD Length = 231 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 103/203 (50%), Gaps = 1/203 (0%) Query: 74 LIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETL 133 +I D E YP +LL D P L V G+ L LAVVG+R S YG + Sbjct: 9 VIARDDERYPHRLLDLPDPPRELHVMGDPGILEMPSLAVVGARKCSPYGMDVAVHIADVA 68 Query: 134 ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGAL 193 A G+ +G A G+ A + L I VLG+GL+ +P + L +++ GG + Sbjct: 69 ADEGMATVTGGAVGVPTGAMRGTLAAEAFGIVVLGSGLDNPYPSDNIDLFQAIVGGGGCV 128 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 V+E+ +PP Y F RNR+I+ LS V+VVE + SGS A+ GR VFA PGP Sbjct: 129 VTEYYDQMPPRPYMFRERNRLIAALSSAVVVVECGMPSGSFSLCDTAMSLGRPVFAFPGP 188 Query: 254 IGNPGSEGPHWLIKQG-AILVTE 275 I + S G + LI G A V + Sbjct: 189 ITSHASTGCNVLIANGQASCVDD 211 >UniRef50_O67250 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O67250_AQUAE Length = 327 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 87/362 (24%), Positives = 144/362 (39%), Gaps = 47/362 (12%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRF---LSFPRK 58 D +++RL + + + +I + +++ L++ L ++A+R L R Sbjct: 8 EDLVLYVRLADTNGVGLKSVKKILYHFKSIRNLNEKELERL-LGTKRAERVVLSLETERN 66 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH 118 E + +++ + I + + YP L + P LF +GE +VG+R Sbjct: 67 FEEKLINIIDKNDIKFILYEDKEYPEILKGIDEPPPYLFYQGEPP---EGGYGIVGTRRP 123 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 S E++ I SG A GID AH +L+ + +LG G+ I Sbjct: 124 SKLSLNAVEKLLESIEG---PIISGGAVGIDFKAHFESLKHGFKNFVILGTGILKI---- 176 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 L G +LVSEF + FP+RNRII+GLSK + V+EA +SG+L+TA Sbjct: 177 -ESRIKKLKGMGASLVSEFLPWTEGSKWTFPKRNRIIAGLSKKLFVMEAGSKSGALITAD 235 Query: 239 CALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 A GRE++A G + +G LI++G Sbjct: 236 YAHRYGREIYAYVGDEHSERWKGCLKLIEEG----------------------------- 266 Query: 299 YSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGY 358 + D + +LL + D V + EV L L + G + G Y Sbjct: 267 -KAKRLDFSSEKDKLLEFLSV-PRTFDEVISFLKRERKEVFKILSSLIIQGKVVQE-GAY 323 Query: 359 VR 360 + Sbjct: 324 YK 325 >UniRef50_UPI0001976538 hypothetical protein BbifN4_05770 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976538 Length = 504 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 83/301 (27%), Positives = 123/301 (40%), Gaps = 18/301 (5%) Query: 36 AVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLAT----- 89 V QR + P + W +I ++P +L Sbjct: 87 QAVRSFRSALATWQQRLRTLPTWDRDYLCGWFTMEGRQWIIAPHDVWWPTRLNDLALLGR 146 Query: 90 TDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARG 147 P L+ G+ AL + +VGSR + YG R A G + SG A G Sbjct: 147 CAPPLCLWGSGDRAALTSCPQPVGIVGSRGVNEYGRRLTTDIAVHAAQAGHLVVSGGAMG 206 Query: 148 IDGVAHKAALQV--------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 +D AH+ AL G ++AV GLN P+ ++ L + E GGALVSE Sbjct: 207 VDAAAHRGALDAMRAYGIGRAGRTVAVFAGGLNHAGPQCNSELFDGIAENGGALVSELCP 266 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 P A F RNRII+ LS ++V +A LRSG+L T E R++ A+PG I PG+ Sbjct: 267 GTIPEARRFLSRNRIIAALSSTLVVTQARLRSGALNTVNWGSELQRDIHAVPGNIDMPGN 326 Query: 260 EGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G + LI++ A +V ++ + H + + D D + P + Sbjct: 327 GGCNRLIQEQRATIVCSVADMDDVW-HAPHPPESFHDVATQRKDGSDCDVGTPRDAGILR 385 Query: 319 D 319 D Sbjct: 386 D 386 >UniRef50_C7MB84 DNA protecting protein DprA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB84_BRAFD Length = 428 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 96/351 (27%), Positives = 157/351 (44%), Gaps = 26/351 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVV-------------LQQTGLTLRQAQRFLSF 55 L+ ++L + + + + + R +R+ S Sbjct: 56 ALLLRAALGPAAALELVDA-GTEETLLQALDGHVPRDTAEPAGSSSRARAARALERWRSR 114 Query: 56 P-RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGE---LHALHSFQL 110 R ++ + ++ +P L P L+V G + + Sbjct: 115 RARIDVDRVRADAARRGIRILIPQDPQWPALLNDLQHTAPHCLWVHGPGDLASLTGARTV 174 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVSIAVLGN 169 A+VGSRA + YGE A G T+ SG A GID AH+ AL +G ++AVL Sbjct: 175 ALVGSRASTPYGEDTAASLAAAFAAGGGTVVSGGAYGIDAAAHRGALAAEDGATLAVLAG 234 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL++++PR +++L + + LVSE P P + F RNR+I+ LS+ +VVEA+ Sbjct: 235 GLDSLYPRGNSQLLERIRARH-LLVSEAPPGTAPTRWRFLARNRLIAALSQATVVVEASW 293 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENLQFGLH 288 RSG+L TAR A + R V A+PGP+ + S G H L+++ GA+L+TEP ++L+ L G Sbjct: 294 RSGALSTARLADQLSRPVGAVPGPVTSAASAGSHRLLRERGAVLITEPADVLDLLPGGPA 353 Query: 289 WLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD-VVAERAGQPVPEV 338 + + ++ +L V + + VAE G V EV Sbjct: 354 AGEGSH---AVQDELDLLSPSDRRVLDAVPPRSSIAEHRVAEEIGFSVAEV 401 >UniRef50_A6D9R1 SMF protein n=3 Tax=Vibrionales RepID=A6D9R1_9VIBR Length = 335 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 24/334 (7%) Query: 1 MVDT-EIW-------LRLMSISSLYGDDMVRIAHWVAKQSHIDA-------------VVL 39 M + E W L S+ + + +IA + + Sbjct: 1 MTEEHEYWRAETVAFYALQSLHGVGFRTLYKIAAQKISFRELIRCDEPSMFSSTLRTKLP 60 Query: 40 QQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVE 99 + +F S + ++ + YP +L +D P LFV+ Sbjct: 61 TSVTESAESWDKFKKELWAKGTSMARINASKDIKVVFYGQDAYPERLKHISDPPMWLFVQ 120 Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L LH+ +A+VGSR S G +L +A G+ SGLA GID AH +++ Sbjct: 121 GALSNLHTQSVAIVGSRKSSDDGHWLTKLIVAGMANTGLVSVSGLADGIDQKAHIESIRF 180 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 N ++AVLG G+++ +P+ + +L GG +V+E+ + +NF +RNRI +GL+ Sbjct: 181 NVPTVAVLGTGIDSNYPKGSEVVREQILAGGGTIVTEYLIGQSYSGHNFVQRNRIQAGLA 240 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+ VE ++SG+ T A + R + P NP S+ + +V Sbjct: 241 TCVIPVEWKIKSGTAHTVNFAKDFNRYLVMPYLPDANPESDELKAISSYKHGVVFNVPAQ 300 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVALPFPEL 313 E L + +L + D+ ++ Sbjct: 301 TEEL---ITFLKEPSTQESIESPDSDLNDGERQI 331 >UniRef50_C3KZK2 DNA uptake protein n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZK2_CLOB6 Length = 385 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 7/275 (2%) Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG-ELHALHSFQL 110 + ++ L ++ + +S FYP L + P L+++G + L + Sbjct: 62 LIENSLNKAKNILKINKELRIRTVLINSRFYPGNLKKMDNAPAILYIKGKNITKLDEKAV 121 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 A VG+R + +G + +LA +I SGLA GID +HKA L V G +IA+L +G Sbjct: 122 ACVGTRTPTIFGIKAANSIVGSLAKENFSIISGLALGIDAESHKACLNVGGRTIAILAHG 181 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L+ I+PR + L+ S+L GG L+SE+P+ P + F RNRI+SGLSKG +V E + Sbjct: 182 LDMIYPRENIELSKSILNNGGTLISEYPVGTKPDKFRFVDRNRIVSGLSKGTIVFETKEK 241 Query: 231 SGSLVTARCALEQGREVFALPGPIGNP-GSEGPHWLIKQGAILVTEPEE----ILENLQF 285 SG++ T L+Q ++VF P P+ + G L+ + + + ++ I+ L + Sbjct: 242 SGTMHTVDYTLKQQKKVFC-PIPLKQELQTSGLIKLLNENKAIGIKTKDNYDVIVHELGY 300 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDE 320 + + A + + + L L V + Sbjct: 301 KIKYDTKAIIKNKSENINKLITLDNNILNDIVSTD 335 >UniRef50_C4L612 DNA protecting protein DprA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L612_EXISA Length = 264 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 5/260 (1%) Query: 25 AHWVAKQSHIDAVVLQQT-GLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 A V G +F + E + E H + + + +P Sbjct: 5 IARFAAARMPVEFVHHYLNGTLGAHRTQFSEHVWRRAERAFQASESYK-HFVTWEEDLFP 63 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 +LL + P LF G+L L A+VGSR + + + +L SG Sbjct: 64 KRLLDIPNPPYCLFYHGDLEVLQERTTAMVGSRELNRISQSLVNHY-HSLIEE-TVSVSG 121 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 A GIDG+ H AL+ + ++AVLG GL+ ++P + + + Q G L+SE+ + P Sbjct: 122 GALGIDGLVHAHALRTHRPTVAVLGAGLDRLYPAANRDMLLQIP-QEGVLLSEYVPNTPI 180 Query: 204 LAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPH 263 + F RNR++SGL ++V++A +SG++ T ALEQG+ VFA+PG +P +EGP+ Sbjct: 181 QKFQFLERNRLVSGLGDALVVIQARRKSGTMNTVGHALEQGKTVFAVPGSPLDPLAEGPN 240 Query: 264 WLIKQGAILVTEPEEILENL 283 LI++GAI +T ++I+ +L Sbjct: 241 RLIEEGAIPLTNSDQIIRDL 260 >UniRef50_Q1V888 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V888_VIBAL Length = 329 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 113/247 (45%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESS 63 TE L + + + +A V + ++ + Sbjct: 6 TESLLAYRYLKGVGKKYLNELAISVETTKQSIDSCFESGRFGGVFSKEDIEEAFSKAREQ 65 Query: 64 LCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE 123 + H +I YP L A +D P LF G +H L + V+G+R + +G Sbjct: 66 IDISTSFGHFIISRLDPEYPQSLKAVSDAPPILFCSGNIHLLKKECITVIGTREPTEHGV 125 Query: 124 RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + + G I SGLA+G+D +AH++ L+ G +IAVL +GL ++P ++ LA Sbjct: 126 VIADRVTQWFSDNGWVIASGLAKGVDTIAHESCLRAGGETIAVLAHGLEKVYPAQNKELA 185 Query: 184 ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + +++ G L++E+ + NF R+RI + L+K V++V++ L GSL +R +E Sbjct: 186 SEIVKSNGLLITEYNYNSFVGRSNFVERDRIQAALAKAVVLVQSDLVGGSLHASRAIIEY 245 Query: 244 GREVFAL 250 GR + + Sbjct: 246 GRFLVVV 252 >UniRef50_A1ACU7 Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1ACU7_ECOK1 Length = 349 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 14/289 (4%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI-----DAVVLQQTG---------LTLR 47 ++ L L I + + ++A + I A G L Sbjct: 33 TESAALLALSEIHGVSYWTLYKVAQKGIRFRDIVTSQTLANFEYLLGVKLHRQPYYLNEG 92 Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 F + + L + +I S YP +L ++ P LF +G + L Sbjct: 93 NWSVFRDSMISTAKILLTHYHNSGYKIIHHGSPSYPDKLNDLSEPPFWLFAQGNVSLLDK 152 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + VVG+R + G + + SGLA GID AH+A+L +IAVL Sbjct: 153 KCVGVVGTRNPTALGIYLTQAVISQFIDSDYSTVSGLAYGIDQSAHEASLLFKIPTIAVL 212 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G G+N+ +P+ + ++ GG +++E+ + P NF RRNRI + LS ++ VE Sbjct: 213 GTGVNSNYPKNSGEMRGHIVNNGGLILTEYLPNQKPSQENFVRRNRIQAALSDVLIPVEW 272 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 L+SG+ T R A + R + P E H L + A ++ P Sbjct: 273 GLKSGTSHTVRYAAQLKRAILCPLLRGTTPQEEIKHALSEYSATIMNIP 321 >UniRef50_B7CAA0 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAA0_9FIRM Length = 336 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 1/236 (0%) Query: 70 PNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 + L+ + Y L T + P LF++G +H L + VVGSR S + Sbjct: 102 NDVILVKKGDQAYSKLLATTKEAPPYLFLKGNVHLLEEKSVCVVGSRNASEESLKKTERI 161 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ 189 ++L R + + +GLARGID H AAL G +I V+G +N +P+ + L + E+ Sbjct: 162 VKSLVKRNIVVNAGLARGIDTATHTAALANGGRTIVVIGTPINQYYPKENKDLQIQI-EK 220 Query: 190 GGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFA 249 G +VS+FP P +NFP RN ++SG+S ++++A SG+L A AL+QGR+V Sbjct: 221 NGLVVSQFPPCNPINRWNFPTRNGVMSGISLATIIMKAGESSGALKQADYALKQGRDVLI 280 Query: 250 LPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 I NP + P I +GA +E+L+ L L + S + D Sbjct: 281 PQSAIDNPLIQWPKTYISKGAHAFKTLKEVLQILNRNELLLNMLDNDMKVSTVEMD 336 >UniRef50_D2MLX4 DNA protecting protein DprA n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX4_9FIRM Length = 241 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 12/250 (4%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD 91 I + G Q L + I YP + Sbjct: 4 EDIAQYSYRYAGNWKAVEQAILQEEENPYYTVYE-------PYITYLDPEYPEEFRHLEY 56 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P LF G + L ++ +VGSR S GE + + C L + + SGLA+G+D + Sbjct: 57 PPWVLFYRGNVAILEKRKVTIVGSRKISERGEYYTKQVCAKL-KKDFVLVSGLAKGVDAM 115 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 H++ L+ +G++IAV+G+GL +PR + +L L + ++SE+P V +FP R Sbjct: 116 VHQSCLE-DGLTIAVIGSGLEVHYPRCNEKLYQQ-LSRNHLILSEWPGYVGVQKVHFPWR 173 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 NR+++ L + ++V +A RSG+++T + AL+ G++V+ LP P+ G + LI++GA Sbjct: 174 NRLLAALGEKIIVTQAKSRSGTMITVQEALQLGKDVYCLPYPLDEIEGSGCNQLIQEGAS 233 Query: 272 LVTEPEEILE 281 L EE+ E Sbjct: 234 LY--IEEVFE 241 >UniRef50_B7UMR1 Predicted protein n=1 Tax=Escherichia coli O127:H6 str. E2348/69 RepID=B7UMR1_ECO27 Length = 319 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 9/263 (3%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS 107 + + L LIP SEFYP L T + P L+++G+ L Sbjct: 53 LKDKISETDFLIANAELENHHVNGVELIPYGSEFYPLSLAFTPNPPSILYIKGDKSILKE 112 Query: 108 -FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +A+VGSR S GE R + + G + SGLA G D AHKA LQ G +IAV Sbjct: 113 LPGVAIVGSRDTSPAGEEITRRITNQIVSAGYIVVSGLAIGTDANAHKATLQAKGKTIAV 172 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L +GL P++++RLA +L++GGA +SE+P+ P +F +RNRI GLS G +++E Sbjct: 173 LAHGLEEAKPKQNSRLAQEILDKGGAWISEYPMGRPAQKQSFVQRNRIQVGLSAGSILIE 232 Query: 227 AALRSGSLVTARCALEQGREVFAL----PGPIGNPGSEGPHWLIKQGAILV----TEPEE 278 AAL SG++ A A + R VFA+ P N EG L+K + ++ Sbjct: 233 AALNSGTITQAEFANKAKRPVFAVVPHLPNNPLNLNCEGTVDLVKSNMARALKTKRDYDD 292 Query: 279 ILENLQFGLHWLPDAPENSFYSP 301 ++ + +L + S Sbjct: 293 VIMIINESREYLLELKWPGKQST 315 >UniRef50_Q2BRM6 DNA processing chain A n=2 Tax=Gammaproteobacteria RepID=Q2BRM6_9GAMM Length = 325 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 26/300 (8%) Query: 1 MVDTEIW-------LRLMSISSLYGDDMVRIAHWVAKQSHID-----AVVLQQTGLTLRQ 48 M + + W L L + + + +++ I + G+ ++ Sbjct: 1 MTNQDYWRNETVAFLALSELKGVGYWTLYKLSCKNISFKKILKEYTKEELESLLGIKIKL 60 Query: 49 -----AQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 F +S +L L +I D + +P L D P LFV+G+L Sbjct: 61 PSDTGWDEFCIALWESGIEALRSLHAQKVLMIFHDQDSFPESLKDLADGPRWLFVQGKLE 120 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L +AVVG+R + G + F L+ + SGLA GID + H +L+ + Sbjct: 121 NLSKKSVAVVGTRKPTDDGVFLTKYFVAALSEHSLLTVSGLAYGIDQITHLESLRYGIPT 180 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +AVLG G+ +P+ + ++ +GG +VSE+ + NF RRNRI + LS V+ Sbjct: 181 VAVLGTGILQNYPKGSEEIRLRIVSEGGTIVSEYLPNQSYSGENFVRRNRIQAALSTFVV 240 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-----KQGAILVTEPEE 278 VE ++SG+ T A R++ I P + G + K AI V P+E Sbjct: 241 PVEWKIKSGTAHTVEFANRYQRKII----NIFLPSTYGLREELSFSESKYNAISVEIPKE 296 >UniRef50_B0RJ66 Putative DNA processing SMF-family protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus RepID=B0RJ66_CLAMS Length = 317 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 26/309 (8%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI--------DAVVLQQTGLTLR------- 47 + + I + + + + + ++ Sbjct: 10 ERFARVVWTHIGAPGDTVAGSLVQHLGATTALTAVVEQWPLRLMRSALEDGEEPGPVLDL 69 Query: 48 --QAQRFLSFPRKSIESS----LCWLEQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEG 100 A + ++ + I L + ++ +P L + P AL+V G Sbjct: 70 HALAAQLRAWRERFIVDDVFRSLRTAAECGATVLIPSDPQWPRGLADLGPEMPYALWVRG 129 Query: 101 --ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + LAV+G+RA + YG L G+ I + + GIDG A +AA+ Sbjct: 130 HTDRMIRLERSLAVIGARAATVYGSAVTSESVSELVREGIAIVNSGSFGIDGAALRAAVG 189 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 G + AV+ +G++ +P HA L ++E GA+V+E P P ++F RNRI++ L Sbjct: 190 STGSAFAVISSGVDVTYPHAHAELFEDVIET-GAVVTERPPHTAPSRWSFLSRNRILAAL 248 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPE 277 S G +++E + RSG+L+TA+ AL+ GR V A+PG + +P + G +I+ GA LVT E Sbjct: 249 SSGTVLMEGSHRSGALLTAQRALQLGRPVGAVPGQVDSPSAGGCLTMIRDHGATLVTGHE 308 Query: 278 EILENLQFG 286 ++ L Sbjct: 309 DMSRLLPPF 317 >UniRef50_Q2G684 SMF protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G684_NOVAD Length = 345 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 8/260 (3%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTG--------LTLRQAQRFL 53 + +L L ++ + + +A S + + ++ R R Sbjct: 31 DEERAFLALATVRGIGQKTLFAMADDKRSFSDALEYGPEASNPAGSDGKAISERHWSRVR 90 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVV 113 + + LE L+ S +P LL P LFV+G + L +AVV Sbjct: 91 GHALEQGDRLAEHLEALGIGLLFRGSPGFPSALLDLERPPHWLFVQGSVERLAEPSIAVV 150 Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R S G R L GV SGLA GID +AH+ +L+ +IAVLG G+ Sbjct: 151 GTRKPSADGFFLSRYVGACLGEWGVPTVSGLAAGIDQLAHEHSLRAGVPTIAVLGTGMLE 210 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 +P+ RL +L GGA+VSE+ A NF +RNR+ + L + ++ E RSG+ Sbjct: 211 DYPKGSGRLRDHILATGGAIVSEYLPTASYSAENFVQRNRLQAALGRILIPAEWNRRSGT 270 Query: 234 LVTARCALEQGREVFALPGP 253 T R A GR + L P Sbjct: 271 AHTVRFATALGRPIACLRLP 290 >UniRef50_B5Y8G0 DNA processing chain A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8G0_COPPD Length = 257 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 4/213 (1%) Query: 73 HLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 ++ D + +L+ +V G + +VG+R S YG R + Sbjct: 6 RVLKPDDHIFCGRLVQQGLERPV-YVRGNSIPPLEKTVGIVGTRHASSYGLRVAYELGKY 64 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 A+ G + SGLA GID AH+ AL+ G ++ VLG+GL+ +P+ L + E+ G Sbjct: 65 YASEGYVVVSGLAYGIDQKAHEGALE-RGTTVGVLGHGLDFHYPKSTLLLRKRI-EEKGF 122 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 +++ + D P F RN +I+ LS ++VVEA +SG+L+TA AL+ G+EV A+PG Sbjct: 123 VITWYKPDQGPRKAFFRERNWLIAALSDFIVVVEAPAKSGALITASFALQMGKEVKAVPG 182 Query: 253 PIGNPGSEGPHWLIKQGAILVTE-PEEILENLQ 284 I + G + LI GA + P++ + + Sbjct: 183 DIDRDSAMGSNMLIFDGAEPILAIPKDTDQQFR 215 >UniRef50_C9RLE2 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLE2_FIBSS Length = 290 Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 129/275 (46%), Gaps = 4/275 (1%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT 139 E YP L A+ P LF G L + +A+VG+R S E R +L Sbjct: 8 ENYPLALGASKYSPKQLFCIGTLPSTDKIGIAMVGTRRPSASAEELCRRLIGSLKATNAV 67 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 + SGLA+GID H+AAL +IAVL GL T LA +L+ GGAL+SE+ Sbjct: 68 VISGLAQGIDSFCHRAALDAGIPTIAVLAQGLGTKIEGERGILAKRILDAGGALLSEYEG 127 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 D P NF RNRIISGLS+ LVV++ + G+L+TA+ L++G+++ A PG Sbjct: 128 DTPAYKGNFIARNRIISGLSQSTLVVQSRKKGGALLTAQFCLDEGKQLLACPGNFDCELY 187 Query: 260 EGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 G + L+ G A V PE + L + + Y ++ ++ Sbjct: 188 SGTNTLLDSGHAKAVFIPESLRAVAGIPLLEGAKMEQLTTYGVQ---LSDGAQKIFERFN 244 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + PE++ L ELE++G + + Sbjct: 245 GFRKTFSELQQEFDFKPPELLAILTELEISGLVTS 279 >UniRef50_Q06GA6 Putative Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GA6_9NOCA Length = 301 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 118/297 (39%), Gaps = 14/297 (4%) Query: 1 MV-DTEIWLRLMSISSLYGDDMVRIAHWV---AKQSHIDAV-VLQQTGLTLRQAQRFLSF 55 M + + L+ + + V + Q R + + Sbjct: 1 MDAERIALVALLRL-RPQKLTWSALTEKVLDAGSARIVFDDYFPPQLIDDPRVSAAWA-- 57 Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGS 115 E+ L + +P +L P LF +G L +VVGS Sbjct: 58 ---QAEADLQTWHDEGLEFLSVLDPMFPRRLHDIMQTPPFLFAQGHLVPDDQ-GFSVVGS 113 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R S GE + R LA G+T+ SG+A GID AH+AAL V G ++A + G+N + Sbjct: 114 RKASPEGEGFAREIATYLAGEGLTVVSGMAAGIDTAAHQAALAVGGRTVAFVATGVNRTY 173 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P ++ L S+ + G ++S+F D PP + F RN ++SG ++VEA SG+ Sbjct: 174 PAQNRHLHESIADL-GLVLSQFWPDAPPQKHTFLMRNALMSGYGLASIIVEAGETSGARA 232 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 AR A+E GR V + + ++G L T+ +I + Sbjct: 233 QARMAVEHGRPVILTESVVARNHWAKTL-IQQRGVHLATDMTDIDRLVTQIREEPAR 288 >UniRef50_C4DRS5 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRS5_9ACTO Length = 310 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP-----GALFVEGE--LHALH 106 R L + +I + +PP+L P L++ G L Sbjct: 62 RRVRAVATEQLERSREAGARIIVPGDQEWPPRLGDLARVPDAVVPWCLWLRGPAPLAQTT 121 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG-VSIA 165 +A+VG+R + YG +A+ G + SG A GID AH+A L +IA Sbjct: 122 EQSVAIVGARCCTPYGHTVASELAFQVASSGWAVASGGAYGIDVAAHRAVLAAEAAPTIA 181 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V+ G++ +P H + + Q G +VS+FP+ P + F RN++++ L++G +VV Sbjct: 182 VVACGVDQYYPSGHREVFDRI-AQTGLIVSQFPVGFAPQRHRFLTRNQVLAALTRGTVVV 240 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ-GAILVTEPEEILENL 283 EAA RSG+ A GR V +PGP+ + S G H +++ A +VT E+L++L Sbjct: 241 EAAARSGAKHCLGQAAAMGRYVAGVPGPVTSAYSRGVHQVLRDQHARVVTSGVELLDDL 299 >UniRef50_D1AH66 SMF family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH66_SEBTE Length = 234 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 4/233 (1%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 W+ L + +++ L + L Sbjct: 3 WINLREF-GIKDSLILKFMKEFKSFESFIR-DENLRILDRDIRAKVLLAALHDNRKFYEK 60 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 L++ N L+ S+ YP L D P L+V G++ + VVG+R ++ YG+ Sbjct: 61 LQESNIRLLEYTSDDYPENLRNIQDPPLFLYVAGKIKF-GERNIGVVGTRRNTIYGKVSC 119 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + L V I SGLA GID +AH+ L+ N I V+G+GL+ I P +L + Sbjct: 120 ESILKELLEYDVNIVSGLALGIDTIAHEFTLKKNCCCIGVVGSGLDKIFPYESRKLWERI 179 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 E G L+SE+P PL +NFPRRNRII+GLS+G+L+ E+ + G LV +R Sbjct: 180 PE-NGMLISEYPPGSEPLKWNFPRRNRIIAGLSQGILLCESYEKGGGLVNSRF 231 >UniRef50_B6AM77 DNA processing protein DprA n=2 Tax=Leptospirillum sp. Group II RepID=B6AM77_9BACT Length = 306 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 2/232 (0%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + R+ L ++ +I D YP LL D P LF G +A+ Sbjct: 64 MEIFREKAVRVLDKAKRQGIMMIAIDEPAYPEILLRLPDPPLVLFFRG--VLPGRPGIAM 121 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R + R L+ G+ I SGLA G+D AH+ AL G ++AV+G GL+ Sbjct: 122 VGTRRPTVEARRGFESLAAGLSRFGLPIVSGLAAGLDAAAHRGALLGKGTTVAVVGTGLD 181 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++P H LA +L GG +VSEFP PP ++FP RNRI+ GLS G++ SG Sbjct: 182 RVYPDFHRTLAGEILSGGGCIVSEFPPGSPPDGWHFPFRNRIVVGLSAGIVAGPHRRASG 241 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 + VT R AL +GR+V +EGP L++QGA V+ E+++ L Sbjct: 242 TSVTVRRALGEGRDVVVYDRGGFGETTEGPEALLEQGARRVSSAEDVILALG 293 >UniRef50_Q2S8I4 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8I4_HAHCH Length = 233 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 5/217 (2%) Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERW 125 ++ IP +S YP L + + P L+ G L L+ +A+VG+R + G Sbjct: 2 HKKFGVIAIPLNSSEYPKHLKSIANPPATLYARGNLDLLYEAPGIAIVGTRNATANGLEI 61 Query: 126 GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + ++G + SGLA GID AH+ L G +IAVL +GL+ PR++A L + Sbjct: 62 TKRVAAYAVSKGAIVVSGLALGIDAAAHQGCLNAGGRTIAVLASGLHIATPRQNAGLGDA 121 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGR 245 +LE G VSE P PP F RNRI GLS +++E+ ++SG+ A+ +++ Sbjct: 122 ILESDGLWVSEHPEGTPPARQYFVPRNRIQVGLSACSVIIESDVKSGTTTHAKFCVQEKH 181 Query: 246 EVFAL---PGPIGNPGSEGPHWLIKQ-GAILVTEPEE 278 +FA+ P S GP +++ GAI + + Sbjct: 182 PLFAVVPQPRNPFGLNSAGPEMMVRDMGAIPLKTRND 218 >UniRef50_B4WVJ4 SMF family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVJ4_9SYNE Length = 293 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 26/276 (9%) Query: 33 HIDAVVLQQTGLTLRQAQRFLSFPRKSIE------------------SSLCWLEQPNHHL 74 + Q + A+ F SF + L + Sbjct: 20 AAYEYLWTQYPSVPKLAKLFASFNHELPSVIAREQNASPGIIKAVKCKIADLLPFRSFSA 79 Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + YP L + L+ +G L L S ++VVGSR + G R R L Sbjct: 80 LFYGDFEYPTTLRDAKNPIEVLYYQGNLDLLSSKAVSVVGSRKPTDEGRRRARKIARLLV 139 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 T+ SGLA GID AH+AA++ G +I+V+G LN ++P+ +A L + + LV Sbjct: 140 ASDFTVMSGLATGIDTEAHRAAIEAGGRTISVIGTALNEVYPKENAELQRKI-SKEFLLV 198 Query: 195 SEFPL------DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 ++ P D FP RN+ +S LS+ ++VEA+ SG+L+ AR AL+QGR++F Sbjct: 199 TQVPFYQYSMQDYRRNRGFFPERNKTMSALSQATIIVEASETSGTLIQARAALQQGRKLF 258 Query: 249 ALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ 284 L E P +K+GAI + + E+LE L+ Sbjct: 259 ILKSCFDRGL-EWPERFLKRGAIKIEDGSEVLEQLR 293 >UniRef50_Q8U1A8 DNA processing smf protein homolog n=1 Tax=Pyrococcus furiosus RepID=Q8U1A8_PYRFU Length = 217 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 5/201 (2%) Query: 69 QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 + IP DS YPP L D P ++ G + L+ +A+VG+R S GE + Sbjct: 16 RRKITRIPIDSPDYPPLLKQIKDPPKIIYAIGNVRLLNKPAVAIVGTRQPSERGEYYAEK 75 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 E A +G I SGLA GID + K AL+ I VL + +N I P+ + +LA ++ Sbjct: 76 VAEFYAKQGFVIVSGLALGIDSIVIKTALKTGAHVIGVLPSPVNDIVPKSNEKLAEKIIR 135 Query: 189 QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 GG L+SE P P Y+F RRNRIISG+S V+V+E+ L+ G++ T + A +Q R + Sbjct: 136 SGGLLISELPEGTKPKKYHFVRRNRIISGISFAVVVIESELKDGTMHTVKFAKQQRRIIL 195 Query: 249 ALPGPIGNPGSEGPHWLIKQG 269 + N + G L +G Sbjct: 196 -----VTNLPASGNAKLKNEG 211 >UniRef50_B0SCN7 DNA processing protein A n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCN7_LEPBA Length = 308 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 12/294 (4%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADS 79 +I ++ + + +R+L + PN L+ Sbjct: 16 RKTKIWRSYNSFPNLYNDLPKF--FVKEDWERWLFEC-----QIWEKNKDPNWQLVHFYD 68 Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR-GV 138 E YP L D P L G+L +A+VG+R S + ++LA + + Sbjct: 69 ESYPQLLKEIYDPPLVLVCLGDLSVFQRELVAIVGTRKSSPISLVATKALVQSLAKKEKM 128 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL-EQGGALVSEF 197 I SGLA GID A +AL + + VLG L +P + L + + L+SEF Sbjct: 129 AIVSGLALGIDRQAFVSALDLGVPVLGVLGTTLGMEYPPGNRDLYKRIKSDTKQLLISEF 188 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 + P + FP+RNR+ISGL + V ++E+ +SG++ TA A+EQ RE+F P Sbjct: 189 LMQTEPAKWTFPKRNRVISGLCQKVYILESGKKSGTISTATSAMEQNREIFVFDHP-HQF 247 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFP 311 +EG L++QGA L+T E+ E + + + E ++ Sbjct: 248 DNEGGKMLLRQGAGLLTG--EMTEPSKQWIEKKILSYEEWRKQKSTNFLSKKEE 299 >UniRef50_A2CBT1 SMF family protein n=13 Tax=Cyanobacteria RepID=A2CBT1_PROM3 Length = 378 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 155/373 (41%), Gaps = 15/373 (4%) Query: 3 DTEIWLRL-MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI- 60 + W L + M + A + LR+ + + K + Sbjct: 8 ERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLG 67 Query: 61 --ESSLCWLEQPNH--HLIPADSEFYPPQLLATTDYPGALFVEGELHALH----SFQLAV 112 S + ++ +P L A P ALF +G L +A+ Sbjct: 68 LHRSKWGTCPSVDVPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAI 127 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 VG+R S +G R LA G + SGLA GID AH+ L+ G + VLG L Sbjct: 128 VGTRRPSNHGLRVAEALGRALALAGWPVISGLAEGIDAAAHRGCLEGGGAPVGVLGTPLQ 187 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 ++PR++ L +L+ G LV+E P + F RNR++ L+K V+VVE RSG Sbjct: 188 KVYPRQNEGL-QALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVECPERSG 246 Query: 233 SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQ---FGLHW 289 +L+TAR A+EQ ++ +PG + G + L+ A + PE +++ L +H Sbjct: 247 ALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHS 306 Query: 290 LPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAG 349 A + S + LL +GD ++ + + QLL+LEL G Sbjct: 307 PSVAFDLSGSRSSSRAGQHGDTALLQAIGDGA-SLEDLMTGLNLSSARLTEQLLQLELKG 365 Query: 350 WIAAVPGGYVRLR 362 + A PG + RL Sbjct: 366 VVVAEPGLHWRLA 378 >UniRef50_Q3SUE7 SMF protein n=9 Tax=Proteobacteria RepID=Q3SUE7_NITWN Length = 302 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 12/267 (4%) Query: 26 HWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW-LEQPNHHLIPADSEFYPP 84 + + + + R S+ ++ + A YP Sbjct: 33 ASFKSIADLFSKQEGAVPSDFVERSRASSYANDVHARLKDAGIKSYGVRVHGAGD--YPE 90 Query: 85 QLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 +L L+ +G ++S +AVVG+R S G R ++L TI SG Sbjct: 91 RLRVADHPIELLYFQGWWELVNSPRSVAVVGTRKPSAEGLARTRRLVKSLLQDDFTIVSG 150 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPP 203 LA G+D AH AA+++ G +IAVLG L+ +P +A+L + E L+S+ P+ Sbjct: 151 LAAGVDTAAHTAAIELGGRTIAVLGTPLSKSYPASNAKLQQQIAEHH-LLISQVPVKRYS 209 Query: 204 LAYN-------FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 N FP RN +S L+ ++VEA SG+LV AR AL+QGR+VF L N Sbjct: 210 NQKNPTSNNFFFPERNITMSALTDATIIVEAGETSGTLVQARHALKQGRKVFILESNFRN 269 Query: 257 PGSEGPHWLIKQGAILVTEPEEILENL 283 P + PH ++GAI V + ++I ++ Sbjct: 270 PELKWPHTFEERGAIRVADYDDIRRHI 296 >UniRef50_Q9ZJ08 FIR2 n=1 Tax=Rhodococcus fascians RepID=Q9ZJ08_RHOFA Length = 293 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 119/282 (42%), Gaps = 9/282 (3%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 + W L ++ +V +A ++ V + S+ E+ Sbjct: 5 ERVAWAYLAHVAR-GQGSLVHLAVSLSGVEAAAEAVRHREVSEDLLRATARSWDYSGAEA 63 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLATTD----YPGALFVEGE--LHALHSFQLAVVGSR 116 L L+ +P +L P AL+V G+ L +A+ G+R Sbjct: 64 DLETAATLGARLVTPADAEWPQRLRMAGWLEGSTPVALWVRGQGALPGADVSAVALTGTR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 A + YGE F LA RGV + SG GI+G +AAL V +AV+ GL+ +P Sbjct: 124 AATAYGEHVASEFAGDLAMRGVAVLSGSGFGIEGAVLRAALGVGAGPVAVMPCGLDRAYP 183 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 HARL + EQ G +VSE+ P F +++ LS V+V EA R +L Sbjct: 184 SGHARLLERVAEQ-GVVVSEYSFGAEPRRERFNGSGALLAALSDAVVVPEAGSRGRALSV 242 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPE 277 AR GR V+A+PGP+ + S G H LI G A L Sbjct: 243 AREVHRLGRAVYAVPGPVTSAASNGCHTLIIDGVARLAMSAA 284 >UniRef50_A1B6R6 SMF family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6R6_PARDP Length = 331 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 14/303 (4%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVV--------LQQTG--LTLRQAQRFLSFPR 57 L L SI + + + +I+ + + + L+ G L+ A + S Sbjct: 23 LALSSIKGVGFETLRKISERGIAYAEVIDLQNKNDVSTILRSAGARLSDETAAPWGSTRE 82 Query: 58 KSIES---SLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVG 114 +++ L L + + +I + YP QLL D P LFV+G L +AVVG Sbjct: 83 RALSRGYELLDRLTKIDGKVIFHSDKEYPSQLLDLPDAPRWLFVQGNSEVLRGPSIAVVG 142 Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR S G R L+ SGLA GID H A+L+ +I+ LG G+ + Sbjct: 143 SREPSDDGIWLSRYVGFNLSEWSCPTVSGLAVGIDQEIHSASLRAGVPTISFLGTGIFSD 202 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR +L ++ + GGA+V+E+ + NF +RNR+ + L+ ++ VE A +SG+ Sbjct: 203 YPRNSEKLRDAIAKSGGAIVTEYLPADTYSSKNFVKRNRLQAALAAALIPVEWAAKSGTA 262 Query: 235 VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAP 294 T R A R + L P + + I + A + T P++ LE +QF L + P Sbjct: 263 HTVRYAASLSRPIACLRLP-FGKVPDWVNTEIAKKASVFTVPQQQLEFVQFVLASVRSRP 321 Query: 295 ENS 297 E Sbjct: 322 ERQ 324 >UniRef50_A6CU48 Putative uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU48_9BACI Length = 191 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 1/183 (0%) Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + ++AVVGSR Y + L SGLA G D AH+ + + G + Sbjct: 5 LMRERKIAVVGSRKADEYTTAALKKLLPQLVEEQFITVSGLAAGADEFAHRLTITLKGDT 64 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + V+G G I+P + LA + ++ L+SE+P D P ++FP RNRIISG++ VL Sbjct: 65 VGVIGGGFRHIYPASNRDLANFMAKKH-LLISEYPPDTRPQRWHFPMRNRIISGMTSAVL 123 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V +A+ +SGSL+TA +L +GR+V+ALPG + +P SEG + LI+QGA L+T E+I+ Sbjct: 124 VTQASRKSGSLITAEISLNEGRDVYALPGRLDSPLSEGCNHLIQQGAKLITSSEDIISEF 183 Query: 284 QFG 286 ++ Sbjct: 184 KYD 186 >UniRef50_D1FNP2 SMF protein (Fragment) n=1 Tax=Anabaena circinalis AWQC310F RepID=D1FNP2_9NOST Length = 208 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 2/205 (0%) Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 LQ +IAV+G G++ I+P +++ + +L + G ++SE+P PP +FPRRNRII+ Sbjct: 3 LQAGRKTIAVMGTGVDVIYPHKNSHKSPQIL-KSGIVISEYPAKTPPNRTHFPRRNRIIA 61 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 GLS+ VLV+EA L+SG+L+TA A E R+V+ALPG I + S+G LI QGA L+ Sbjct: 62 GLSRAVLVMEAPLKSGALITATYANEFNRDVYALPGKIDDQPSQGCLKLISQGAGLINHQ 121 Query: 277 -EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPV 335 E+L L + SP ++A +++ + + D + ++ G Sbjct: 122 LNELLIMLGAIPQIDIETETPLVKSPPIPNLAPELQQIINILAIDALSFDFIIQKTGMNA 181 Query: 336 PEVVTQLLELELAGWIAAVPGGYVR 360 V + LL+LEL G + +PG + Sbjct: 182 AIVSSSLLQLELMGLVTQLPGMRYQ 206 >UniRef50_A8G5K2 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G5K2_PROM2 Length = 311 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 5/243 (2%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQS--HIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLC 65 L L+SI + ++ + +I + ++ ++ A+ F + L Sbjct: 9 LTLLSIDGFGLVNSYKLLSSLESIRTDNIIEALNRKKDFSISSAEWFAKKDK--FLEKLD 66 Query: 66 WLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-HSFQLAVVGSRAHSWYGER 124 ++ IP S YP L+ D+P +FV+G+ +L LA+VG+R + Y Sbjct: 67 KSQEQKISAIPFTSNDYPKALMELNDFPLVIFVKGKSESLNFQNTLAIVGTRNPTKYTYD 126 Query: 125 WGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 C A+R ++ SGLA G D +AHKAA+++ ++AVL NGL+ I+P+ +A LA+ Sbjct: 127 NAPEICNIFASRSQSVISGLAIGCDSIAHKAAIKMGIPTVAVLPNGLDEIYPKENANLAS 186 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG 244 +++ GG LVSE+ + + P Y F R+RI +GLS+ L++E++ + GS+ R + Sbjct: 187 EIIDYGGCLVSEYLIGIKPSRYQFVARDRIQAGLSRVGLLLESSSKGGSMHCIRKLEKLR 246 Query: 245 REV 247 R+V Sbjct: 247 RKV 249 >UniRef50_B8KWE1 SMF family protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWE1_9GAMM Length = 313 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 14/261 (5%) Query: 3 DTEIWLRLMSISSLYGDDMVRI-AHW--VAKQSHIDAVVLQQTGLTL-----RQAQRFLS 54 + L L I + + + +I DA + ++ + + S Sbjct: 11 EKLALLALSEIRGVGFETIKKISLDQIPFTTFFQSDAGQHYKPHISSNATYSKIKEYLAS 70 Query: 55 FPRKS-----IESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ 109 + + + +L+ +I + +P +L D P +F+EG AL F Sbjct: 71 SRSINDALDLAKRNFDYLQNRQISIILPGEDRFPKKLHDLNDMPQWIFIEGASEALIGFS 130 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + VGSR S G+ F L +T SGLA GID + H+A++ + ++AVLG Sbjct: 131 VTAVGSRKPSAEGKWLANYFGLCLQDLKLTTISGLAEGIDQIVHRASISAHLPTVAVLGT 190 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G+ + +P+ L +LE GGALV+E+ A NF RRNR+ + L + +E + Sbjct: 191 GILSDYPKGSQELRGRILENGGALVTEYLPRDTFSAKNFVRRNRLQAALGDIIFPIEWQI 250 Query: 230 RSGSLVTARCALEQGRE-VFA 249 +SG+ T + A E R +F Sbjct: 251 KSGTAHTVKFAREMHRPMIFC 271 >UniRef50_Q04VL7 DNA processing protein A n=4 Tax=Leptospira RepID=Q04VL7_LEPBJ Length = 327 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 9/250 (3%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYP 83 I + ++++A + + ++ + + S E L++ ++ YP Sbjct: 20 IFKKLNSWANLNAYLERFLPSSVLRGALYAS------EKISNDLKKTGFSVLSFFDPEYP 73 Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVT-ITS 142 L D P LF +G L+ L AVVG+R S L L G + + S Sbjct: 74 SLLKEIYDPPLILFYKGNLNILDLSFAAVVGTRNPSPISCYAAELIPYYLKENGFSGVVS 133 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL-EQGGALVSEFPLDV 201 G A+GID + AAL I V+G G T +P + +L + + +++E+P Sbjct: 134 GFAKGIDATSMNAALDEELAVIGVMGTGPETEYPFENRKLYQRMKYAKRTLILTEYPPGQ 193 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEG 261 L Y FP+RNRI++G+ V ++EA +SG++ +A ALEQ R +F ++G Sbjct: 194 KILKYTFPKRNRIVTGMCNSVFIMEAPEKSGAISSAHNALEQNRNIFIF-SDPRQTKNQG 252 Query: 262 PHWLIKQGAI 271 LI+ GA Sbjct: 253 GEILIRDGAE 262 >UniRef50_Q6MKC9 Putative DNA processing protein (Smf family) n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKC9_BDEBA Length = 315 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 4/257 (1%) Query: 30 KQSHIDA-VVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 + + + L + +K E SL L+ + + YP Sbjct: 38 SADQVLTGLRFRWPELGEAMTKNH-ELFKKHCEESLQ-LKMQGVNFVVYGEVLYPELCYQ 95 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGE-RWGRLFCETLATRGVTITSGLARG 147 D P L G L++ L+VVGSR + + + I SG ARG Sbjct: 96 MADPPLTLSYRGSPAWLNARTLSVVGSREPAADSLLWMEKELGLFCEQQRPCIVSGGARG 155 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 +D AH AL+ ++ VL +GL I+P ++EQGG +SE+ + Sbjct: 156 VDQKAHSVALRKFCPTVVVLPSGLGEIYPANLKEWMGLVIEQGGCFLSEYDHQQKMHKHL 215 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 F RNR+I+ L + L+VEA RSG+L+TA A + GR V+ +PG +P +G L+ Sbjct: 216 FHHRNRLIAALGRASLLVEARRRSGTLITAHQAAQIGRPVWVVPGHPLDPHFQGALDLLM 275 Query: 268 QGAILVTEPEEILENLQ 284 GA V + +++L Q Sbjct: 276 DGAQSVRDAQDLLMFFQ 292 >UniRef50_B7IYS3 DNA processing protein, Smf family n=1 Tax=Bacillus cereus G9842 RepID=B7IYS3_BACC2 Length = 290 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 20/289 (6%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQS-------HIDAVVLQQTGLTLRQAQRFL 53 M E+ L + + + ++ ++ + + + Sbjct: 1 MNIKEMIFVLYDL-GISLATLSKLYRESNEEQLNHLLEGDFLELQFSLGVFNDNELELLS 59 Query: 54 SFP-----RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 S + +I L + YP L + P +F++G L + Sbjct: 60 SIDSIQKSKSNISKILSEFSDEKIEYFIYYEDGYPTSLKSIPSPPFFIFMKGNRSLLENK 119 Query: 109 QLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + +VG+R + + + + + + I SGLA G D AHK L NG +IAVL Sbjct: 120 FICSIVGTRNPTDQTLKQIDSTVQEMVSTDIVIASGLALGTDIHAHKCTLDSNGKTIAVL 179 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFP-LDVPPLAYNFPRRNRIISGLSKGVLVVE 226 + ++ + P+ H A +L + G L+SE+ + N+ RNRIISGLS V++ E Sbjct: 180 PSPIDDVTPKSHKPYANEILAKDGLLISEYYKSETVFKKTNYIHRNRIISGLSNAVIIAE 239 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 + +SG++ TAR A +Q R ++ + S G ++ + + Sbjct: 240 CSEKSGTMHTARYAYKQKRPLYCF-----DNKSTGVLKILSSNSARIYT 283 >UniRef50_C4RB86 Nucleotide-binding protein n=2 Tax=Actinomycetales RepID=C4RB86_9ACTO Length = 345 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 131/300 (43%), Gaps = 7/300 (2%) Query: 3 DTEIWLRLMSISSLYGD-DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + + L+ L + + +V + L R + ++ Sbjct: 48 ERAALVALLRQPDLSWSDTTHEVQEAGTALGVLTRLVGRADTLFPDT--RSVDSLIEAAA 105 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 L + + E YP QL + P LF G L +AVVGSR S Sbjct: 106 GDLLAWQAEGVAVRAFFDEDYPAQLRDIREMPPLLFARGSLRPDP-RAIAVVGSREASDR 164 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 G +LA+RGVT+ SGLA+GID AH+AAL G ++AV+G G+ +P + Sbjct: 165 GLEVAGSVATSLASRGVTVVSGLAKGIDTAAHEAALAAGGRTVAVIGTGIRRHYPAANQA 224 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + E G ++S+F D P +FP RN ++SG + +VVEA RSG+ + AR AL Sbjct: 225 LQEHIAE-VGLVISQFWPDAAPTKQSFPMRNAVMSGYAAATVVVEAGERSGARIQARLAL 283 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 + GR V L G + + + G + E++E + L +P APE + Sbjct: 284 QHGRPV-VLTGQVMRHEWARS-FADRPGVHVARGTVELMEAVDAILDRVPTAPELEGFPE 341 >UniRef50_B7GR87 SMF family protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR87_BIFLI Length = 336 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 3/243 (1%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL 105 R L + + E+ + + YP +L D P LF EG + Sbjct: 74 SRARAAELESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRMVQ- 132 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++VVGSR ++ + L + G + +GLA GID AH AL+ G ++A Sbjct: 133 DELGVSVVGSRKADAESLKFAQDTASMLVSCGFAVIAGLASGIDTAAHVRALEEGGRTVA 192 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +G G+ +PR + L + + G ++S+F D P Y FP RN +SG +VV Sbjct: 193 FIGTGITKRYPRENGTLQDRIG-RDGLVLSQFWPDQGPTKYTFPMRNASMSGYGVATVVV 251 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 +A+ SG+ + AR A + GR V L + + G + G + + +++ L Sbjct: 252 QASEHSGTRIQARQAQQHGRPVI-LRDTVADGTEWGRKLASRPGVCVASTVDDVKARLHD 310 Query: 286 GLH 288 L Sbjct: 311 LLG 313 >UniRef50_C9KR12 Putative DNA processing protein DprA n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KR12_9BACE Length = 309 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 120/311 (38%), Gaps = 35/311 (11%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHW---VAKQSHIDAVVLQQTGLTLRQA-------- 49 M + E W + ++ W + LQ G + +Q Sbjct: 1 MKNREDW------KEVVKKRQNKMEAWRLSFLSVEELL--CLQLLGYSSKQLYENVESER 52 Query: 50 ------QRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT-DYPGALFVEGEL 102 + L + IP + E YP D P + V G Sbjct: 53 YSLKETASMSIRELDKAKRILDRQTKAGVITIPYNDEAYPHHFRNLCRDAPLLIHVLGNK 112 Query: 103 HALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L+ +A++G+RA G F E + +G + SGLA G D AH+ L G Sbjct: 113 DLLNREDNVAIIGARAADKEGLNMAYEFAEQMGKQGHIVISGLALGCDTAAHQGCLDAGG 172 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 +IAV+ +GL+ HP+ + L ++ +GG ++SE P V R R+ L++ Sbjct: 173 QTIAVVASGLDITHPKVNKSLQDEIIAKGGTILSEHPFGVKANPTRLVARCRMQVVLTQS 232 Query: 222 VLVVEAALRSGSLVTARCALEQ-----GRE--VFALPGPIGNPGSEGPHWLIKQG-AILV 273 V+V + + SG++ R A E G E V+++ N + G +L+ A+ + Sbjct: 233 VIVAQCPIISGTMYAVRFAQEYNGVPFGWENNVYSVQYDTQNELNSGNKFLLDYNLALPI 292 Query: 274 TEPEEILENLQ 284 +EI +L Sbjct: 293 RLGQEITLDLD 303 >UniRef50_Q44773 Protein smf n=23 Tax=Borrelia RepID=SMF_BORBU Length = 315 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 7/300 (2%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M+ L + + +++ + + I L+ +R P + Sbjct: 1 MMKLLYIDNLKFLKG---KEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKL 57 Query: 61 ESSLCW-LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHS 119 +++ + S+ YP +L D P A++ +G L AVVGSR S Sbjct: 58 VELQEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKIS 117 Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 R F LA GV I SG A G D AH AA+ N + AV+ ++ I+PR++ Sbjct: 118 KTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQN 177 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + + LLEQGG +++E Y F +RNR++SGLS + + A L+SG+L+TA Sbjct: 178 RKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAEL 237 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFY 299 L+ G +V+ +G L GA + +++ L + ++S Sbjct: 238 GLDLGLDVYVYDLDFCG---DGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKE 294 >UniRef50_B9LA92 DNA processing protein A n=2 Tax=Nautiliaceae RepID=B9LA92_NAUPA Length = 235 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 45/265 (16%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 L+ +G L L+ ++A+VGSR S Y + ++ + L+ + I SG A GID AH+ Sbjct: 13 LYYKGNLELLNKPKIAIVGSRRASKYSKDITKILAKRLSQK-YVIVSGGALGIDKAAHEG 71 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 A +I V + L+ I+P+ + L ++ E +SE+ ++ P + F +RNRII Sbjct: 72 AYPN---TIFVSPSSLDIIYPKSNKSLIQNIYE-NPLAISEYEMNFAPFKHTFLQRNRII 127 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVT 274 +S V++ EA ++SGS+ + A E G++V+ LP I S G L K+ A ++ Sbjct: 128 VKISNLVIIAEANIKSGSMRSFEWAKEYGKKVYVLPHRIN--ESSGTRHLAKENMAEVIW 185 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 + +E ENL + ++ ++ G Sbjct: 186 DIDEFCENLGIEKNTNI------------------------------LTLNEALQKYG-- 213 Query: 335 VPEVVTQLLELELAGWIAAVPGGYV 359 + L E+EL G + G Sbjct: 214 -----STLYEMELEGKVEIKNGKVY 233 >UniRef50_C8LVU3 DNA processing Smf protein n=8 Tax=Staphylococcaceae RepID=C8LVU3_STAAU Length = 178 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 1/176 (0%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 LAVVG+R + Y ++ ++ +TI SGLA+G D +AH+ AL+ N +IAVL Sbjct: 2 HHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVL 61 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G T +P+ L + E+ G ++SE+P P Y F RNRIISGLSKGVL+ EA Sbjct: 62 AFGHQTHYPKSTLALRNKI-EEKGLVISEYPPHTPIAKYRFSERNRIISGLSKGVLITEA 120 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 +SGS +T ALEQ R V+ LPG + NP ++G I++GA +V +I E+ Sbjct: 121 KEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDY 176 >UniRef50_A5UP33 Smf protein n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UP33_METS3 Length = 312 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 134/311 (43%), Gaps = 11/311 (3%) Query: 1 MVDTEIWLRLMSISSLYGDDMV-RIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M+ + L L I+ + + + + +D + + + ++ L + Sbjct: 1 MIKYKELLFLNKINRVGKVTIYTKYWDMLINSKDMDDLFNKLHKSN-KISEDKLIKAKNE 59 Query: 60 IESSLCWL-EQPNHHLIPADSEFYPPQLLAT-TDYPGALFVEGELHALHSFQLAVVGSRA 117 E + ++I + YP +L P L+V+G + AL +A++G+R Sbjct: 60 AEKIYDSVVNDSEINVITVFDKEYPKKLFDMENQKPLYLYVKGSMDALSKSNIAIIGTRK 119 Query: 118 HSWYGERWGRLFCETLAT-RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S E + + + + + SGLA G D +AH+ + N ++IA L GLN I P Sbjct: 120 PSNNTEIFEKKLVKRILDVSKRVVVSGLALGCDKIAHETTVNENKITIAFLPCGLNVISP 179 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +LA S++EQGG LVSE+ D ++ R++I++ S V V++ +SG++ T Sbjct: 180 SSNKKLAKSIIEQGGCLVSEYEPDKKVFKRSYVERDKIVAAFSDIVFVLQCGEKSGTMHT 239 Query: 237 ARCALE----QGREVFA-LPGPIGNPGSEGPHWLIK-QGAILVTEPEEILENLQFGLHWL 290 ++ R+++ LP + + G ++K V++ +E E + Sbjct: 240 VNATIDFKKVNHRDLYVYLPEDMSDGDYSGNISILKSNNGTKVSDIDEFCEEIVILEKDN 299 Query: 291 PDAPENSFYSP 301 + S Sbjct: 300 NLNKNADYQSK 310 >UniRef50_C2DIW6 SMF family Rossmann fold nucleotide-binding protein n=25 Tax=Enterobacteriaceae RepID=C2DIW6_ECOLX Length = 400 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 124/344 (36%), Gaps = 25/344 (7%) Query: 39 LQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGAL 96 ++ + L+ + + ++ ++ YP +L TD P L Sbjct: 62 WSDPRISQERILGLLARGHSLALA-VDKWQRAGLWILTRGDADYPVRLKNRLRTDAPPVL 120 Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 F G L + +A+VGSR R+ + LA +G+ + SG ARGID A +A Sbjct: 121 FGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGICVISGGARGIDECAMASA 180 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 L+V G ++ VL + L + L+ L+S F +V N RN+ I Sbjct: 181 LEVGGTAVGVLADSLLKT--STLVKWREGLIAGNLVLISPFYPEVRFTVGNAMARNKYIY 238 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP 276 L++ +VV A + G++ A AL+ + + L++ GA E Sbjct: 239 CLAESAMVVRAGMTGGTITGAMEALKHQWLPMQVKPNQDMQSA--NSRLVENGASWSAEQ 296 Query: 277 EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPEL------------------LANVG 318 E + + L P+ + LA + Sbjct: 297 AENVTIRLPDVPGLMYDRALRNAQPELFSLHEDDANYAVMPAHTPVDFYQLFVAELAILA 356 Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 E ++ +A G + ++ L E G + + G+ + R Sbjct: 357 KESISIERLASCTGLTIEQISVWLNRAEEEGRVIRLGEGHYQFR 400 >UniRef50_Q1CUG8 DNA processing chain A n=15 Tax=Helicobacter RepID=Q1CUG8_HELPH Length = 266 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 30/278 (10%) Query: 80 EFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWGRLFCETLATRGV 138 E P D P L+ G+ L + ++A++G+R + Y ++ LA Sbjct: 11 ENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNRA 70 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 I SG A G+D +A + AL +I + L+ I+P + ++ + Q G ++SE+ Sbjct: 71 VIVSGGALGVDIIAQENALP---KTIMLSPCSLDLIYPTNNHKVIQEI-AQNGLILSEYE 126 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 D P+ +F RNR++ LS V++ +A L+SGS+ +AR A + + +F LP + Sbjct: 127 KDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--E 184 Query: 259 SEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV 317 S+G + L+++G A + + + L H + L Sbjct: 185 SDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKFG 244 Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 LLE EL G I + Sbjct: 245 DK----------------------LLEYELLGKIKRIN 260 >UniRef50_A9FRD0 DNA processing chain A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FRD0_SORC5 Length = 350 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 93/347 (26%), Positives = 135/347 (38%), Gaps = 33/347 (9%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLL----ATTDYPGALFVEGE 101 R A + R S +S+ + I YP QL T P L++ G Sbjct: 5 ARHAAVLVLISRNSSRASVDRPRMASIE-IQPADPSYPAQLWALVTETEAAPPTLYLRGA 63 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 L A +A+VG+RA S R+ R L G +I SG ARG+D AH+ AL Sbjct: 64 LPAC--PGVAIVGTRAASDEALRFTRALAAALGEAGFSIWSGGARGVDAAAHEGALDARA 121 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 ++ V G G +PR HA L A +L GGAL++ P D PPL F +RN +++ L+ Sbjct: 122 PTVVVGGGGHAHPYPREHAALFARVLAAGGALLARVPDDTPPLPALFLQRNAVLAALTLA 181 Query: 222 VLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 +VVEA + SG+ A A GR + +P +P G + GA +T ++++ Sbjct: 182 TVVVEAGVESGARSAAAAARRLGRHLCVVPHAPWSPRGVGCALELVSGARPITRAADVID 241 Query: 282 NLQ--------------------------FGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 L + ++ +L Sbjct: 242 VLGGQAPPPRRRARRSARSRSPGGGTLPLPEAALGARTGVLPEENGPPPSMSAAERAVLD 301 Query: 316 NVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 + VD V ER G P V LL L L + P G R Sbjct: 302 ALDARPAHVDEVCERTGLPPRRAVEALLTLTLQAVVVEGPAGLFRRA 348 >UniRef50_A6Q7E6 DNA processing protein A n=5 Tax=Epsilonproteobacteria RepID=A6Q7E6_SULNB Length = 258 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 11/250 (4%) Query: 82 YP-PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTI 140 +P P+L + YP LF +G+L L ++++VG+R S Y + + + L RGV I Sbjct: 7 FPIPELESMKKYPPELFYKGDLSLLKRPKVSIVGTRMPSNYTREYTYMLAKALTKRGVCI 66 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 SG A G+DG+AH+ A N +IAV+GNGL+ +P HA++ ++ E G ++S+F Sbjct: 67 VSGAAMGVDGIAHEGAGFEN--TIAVVGNGLDIRYPVVHAKMIEAI-ESNGLMLSQFNDG 123 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 ++F RN ++ L ++V EA L+SGS+ + AL+ G+E+F LP +G S Sbjct: 124 FRATGWSFVVRNELVVALGDVLVVTEADLKSGSMRSVEFALKMGKEIFVLPHRLG--ESM 181 Query: 261 GPHWLIK-QGAILVTEPEEILENLQ----FGLHWLPDAPENSFYSPDQQDVALPFPELLA 315 G + L++ + A + + E + Q V + Sbjct: 182 GTNALLQEEKATAIMDIEAFASRFGRAVESEVEKDEFFYFCQSMPTFDQTVEKFGERVYE 241 Query: 316 NVGDEVTPVD 325 D + ++ Sbjct: 242 AELDGIISIE 251 >UniRef50_UPI0001BC4767 DNA processing chain A n=3 Tax=Fusobacterium RepID=UPI0001BC4767 Length = 309 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 19/255 (7%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQR----FLSFPRKSIE 61 RL+ S L ++ RI + + + ++ T ++ ++ F R+ I+ Sbjct: 25 FLYRLIKQSILENKNLFRI-----SEEELFQFICEEQLYTRKEYEKVLILIEDFFREEIQ 79 Query: 62 SSLCW----LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--SFQLAVVGS 115 + ++ +IP E YP L + P L+++G+L +A+VGS Sbjct: 80 EEISNIETICKKEEIEMIPYGEENYPFPLKNIRNSPYVLYLKGKLPQTEILKKSVALVGS 139 Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-I 174 R S G+ + + + L + SGLA+GID + H L+ G + A+LG GL I Sbjct: 140 RDCSEEGKNFAKKVAQYLKKNKIYNISGLAKGIDSIGH---LETLGQTGAILGQGLAREI 196 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 +PR + LA+ +L GG L+SE P P + RNR+ SGL+ G+++ E+AL+ G+L Sbjct: 197 YPRENQILASRILNMGGFLLSELPPLTPVSMEHLIARNRLQSGLTSGIIIAESALQGGTL 256 Query: 235 VTARCALEQGREVFA 249 T R A EQG++++ Sbjct: 257 HTFRFAREQGKKIYV 271 >UniRef50_UPI000169347A DNA processing protein DprA, putative n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169347A Length = 198 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 4/193 (2%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLS-FPR 57 + + L + + + + + + L Q GLT +QA FL+ + Sbjct: 6 DKRLMLIALNETPGIGMKTIAMLHQKLDDLTVLQTCTQKELIQLGLTEKQASSFLAIQNK 65 Query: 58 KSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA 117 I+ L + E+ + ++ YP L P L+ G+L L + +VG+R Sbjct: 66 GIIDKRLAFYEKQDIQILTVADPDYPNMLKQIYQPPWVLYAIGDLSILGLPMIGIVGTRK 125 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG++ +L RG+ I SG+ARGID AH+ ALQV G ++AVLG + I+P Sbjct: 126 KNPYGKKVTEQLAASLVQRGIGIVSGMARGIDSSAHRGALQVKGKTVAVLGGPADKIYPP 185 Query: 178 RHARLAASLLEQG 190 + +L + E G Sbjct: 186 ENGQLYRQIAESG 198 >UniRef50_C4FFG5 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FFG5_9BIFI Length = 461 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 92/361 (25%), Positives = 126/361 (34%), Gaps = 54/361 (14%) Query: 46 LRQAQRFLSFPRKSIESSLCWLEQPN-HHLIPADSEFYPPQLLAT-----TDYPGALFVE 99 R P W +I +P QL P L+ Sbjct: 83 DGWHARLDCLPSLDWHGLEDWFTMDGSQWIIGPQDGAWPAQLEDLSTHKDWAAPLCLWGV 142 Query: 100 GELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G + AL +AVVGSR + YG R A G I SG A G D AH AL Sbjct: 143 GSMAALTSCPSPVAVVGSRGVTDYGRTVAREVALRAAADGHLIVSGGAMGADAAAHWGAL 202 Query: 158 QV--------NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 G ++AV GLN I P + RL ++ GGALVSE + P A F Sbjct: 203 DALRQRGLDAAGRTVAVFAGGLNHIGPSSNLRLFEAIRANGGALVSEMCPNTIPEARRFL 262 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RNRII+ L+ V+V +A LRSG+L TA + R V A+PG I P + G + LI Q Sbjct: 263 LRNRIIAALASTVVVAQARLRSGALNTAGWGNDLNRVVLAVPGDITVPHNAGCNRLIAQS 322 Query: 270 AILVTEPEEILENLQFGLHWLPDAPE---------------------NSFYSPDQQDVAL 308 ++ + H E + + + Sbjct: 323 ESIILTRTSGIGEFCHAPHEPQALYEVTSETTSFSTGCARTGGICADSDASKSAEHVITP 382 Query: 309 PFPELLANVG-----DEVTPVDVVAERAGQPVPE------------VVTQLLELELAGWI 351 L+A + D + G+ PE V+ + LE G + Sbjct: 383 SQQALIAAIRSCNRQHIRATPDALLAAVGKTAPETSGQKPMAGIGQVMADIGTLEARGLL 442 Query: 352 A 352 Sbjct: 443 R 443 >UniRef50_A2PUH5 SMF protein n=2 Tax=Vibrio RepID=A2PUH5_VIBCH Length = 281 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 22/276 (7%) Query: 2 VDTEIWL--RLMSISSLY------GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL 53 W L+ + + + + + I + + + Sbjct: 7 DQKLAWYHAALILTKKVPVGSVTANNKLRDMLLNIGSFEDIYNQHFGMFPIEEKVENQLN 66 Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHS-FQLAV 112 S K + +I + YP +L + L+ G+L L++ ++ Sbjct: 67 SAYSKI---------DFDFKVITINDPEYPEKLRSVEGATPVLYCRGDLSLLNADRTISF 117 Query: 113 VGSRA-HSWYGERWGRLFCETLATRGV-TITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 VG+R H+ R G L G I SGLA G D +AH+AAL+ +G +IAVLG Sbjct: 118 VGTRELHNPEHVRHGEAVISRLLNAGYQAIVSGLAAGSDTLAHQAALKYSGRTIAVLGTP 177 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL-SKGVLVVEAAL 229 L+ P+ + L + + L+SE+P+ + F RNR GL S GV+V A Sbjct: 178 LDQYFPKENRELQDEI-AKNHLLISEYPIGIRSFGSFFANRNRTTVGLSSDGVVVARAGD 236 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWL 265 RSG+ R +EQG++++AL I P + Sbjct: 237 RSGTQYAIRHCVEQGKQLYALENNIYEPEYQWVKKY 272 >UniRef50_C3WS18 DNA processing chain A n=10 Tax=Fusobacterium RepID=C3WS18_9FUSO Length = 314 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRI---AHWVAKQSHIDAVVLQQTG--------LTLRQA 49 M E L I+S Y + + + + +I+ L + + Sbjct: 11 MYSKEELLIFSFINSNYDISIQNLTYKIFNFSNKENINFFKLNRIEKIEFLKSFFSENNM 70 Query: 50 QRFLS------FPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELH 103 ++ L+ + +E + E+ N + E YP L+ + P +FV+G L Sbjct: 71 EKILNIFDRINLYKIEVEKIIKNCEEKNIKIFYYSYENYPKNLINIKESPYIIFVKGNLP 130 Query: 104 ALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 A+VG+R S G + L+ + SGLA GID V H +LQ Sbjct: 131 IDEELEKSFAIVGTRKPSKEGINFAGDIGSYLSKNNIYNISGLALGIDTVGHNMSLQ--- 187 Query: 162 VSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 + A+LG GL+ I+PR + +LA +LE G L+SE ++ +R+R+ S L+ Sbjct: 188 KTGAILGQGLDLEIYPRENIKLAEMILENNGFLLSELIPQTEISLFSLIKRDRLQSALTS 247 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVF 248 G+++ E ++SG++ T + A EQ +++F Sbjct: 248 GIIIAETGIKSGTVNTFKYAREQKKKIF 275 >UniRef50_A7I0D6 SMF family protein n=7 Tax=Campylobacter RepID=A7I0D6_CAMHC Length = 268 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 22/265 (8%) Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 + P L+ G L L+ ++A+VGSR S Y + L RG+ + SG A G D Sbjct: 20 NAPKKLYYCGNLMLLNMPKIAIVGSRKMSVYTKNLIIKTACELKNRGICVVSGGAIGCDI 79 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 A KAA +I + NGL+ I+P+ ++ + + +SE+ + F Sbjct: 80 AAQKAAFP---YTIGIFANGLDIIYPKENSEQISKIY-SDALAISEYENGTCAQRWQFLE 135 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGA 270 RNRI+ +S V++ +A L+SGSL +A+ AL G +F P I S G + L+ + Sbjct: 136 RNRIVVAISSAVIIAQADLKSGSLNSAKTALNLGIPIFTFPHRID--ESRGTNMLLAEKK 193 Query: 271 ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAER 330 + +++++ L + + +D L F + ++ + + Sbjct: 194 AFL--IDDVMKFADKICDKLGVQNFQTSLNSVPKDEILEFVKYNNDLNSALLKFGDLI-- 249 Query: 331 AGQPVPEVVTQLLELELAGWIAAVP 355 E ELAG I + Sbjct: 250 ------------YEYELAGKIEIMG 262 >UniRef50_A3CVL8 SMF family protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVL8_METMJ Length = 314 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 111/291 (38%), Gaps = 16/291 (5%) Query: 1 MVDTEIW--LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRK 58 M + I L +++ A + + + + + + + Sbjct: 1 MDNLSIREIAFLAALNDNQALKRQGYAEYFRDPAVLRDLYADTFEPGAKPRRAYPGPLIA 60 Query: 59 SIESSLCW------------LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH 106 E Q ++P YP +LL D P L+ G L Sbjct: 61 RAEEIREKGLLAFYIDTLTGYRQKGVRILPVFDAGYPGRLLGIRDPPFLLYQVGREETLA 120 Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +AVVG+R S G R + L G + SGLA G D AH AA+ G ++AV Sbjct: 121 KPAVAVVGTRTISRAGIERARETVDLLVRLGYVVVSGLALGTDACAHTAAIDCGGETVAV 180 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L + + P + LAAS+ G+L+ E F RNRI SGLS GV+V+E Sbjct: 181 LPGDVTVVVPGENRTLAASI-AGSGSLLGEITHLAGMHKGRFLERNRITSGLSDGVVVIE 239 Query: 227 AALRSGSLVTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEP 276 GS+ A A QGR V+ L P G L+ GAI V P Sbjct: 240 TGKSGGSVRQAETAFRQGRPVYVLEPDCSDAKAVAGYQHLVSCGAIPVESP 290 >UniRef50_C9RNH8 SMF family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNH8_FIBSS Length = 282 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 17/252 (6%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + ++ + + ++ ++ ++ + E +P LL Sbjct: 37 ASEKLKEEMFFDDAELYEIDNALKERSKAF---------SVLFKNDERFPKGLLNVKYPL 87 Query: 94 GALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 G + +G L L + ++VVGSR S G+ + L TI SGLA+G+D A Sbjct: 88 GMFYYKGNLDLLKNVCVSVVGSRHVSPKGKIRTEKLIKEL-HSNTTIVSGLAKGVDTAAL 146 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD------VPPLAYN 207 A+ + I V+G ++ +P+ + L + L+S+ PL Sbjct: 147 TTAISLGKKVIGVIGTPIDHYYPKENKELQDEI-ATNHLLISQVPLYKYDKQSFVTKKMY 205 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 FP RN +++ +S ++VEA+ SG+ A+ + G+++F L N P ++ Sbjct: 206 FPERNVVMAAISDATIIVEASETSGTHSQAKACFDLGKKLFILNSCFENHEITWPTKYLE 265 Query: 268 QGAILVTEPEEI 279 +GA+ V +I Sbjct: 266 KGAVRVRAITDI 277 >UniRef50_Q47S14 Similar to Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Thermobifida fusca YX RepID=Q47S14_THEFY Length = 322 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 104/290 (35%), Gaps = 5/290 (1%) Query: 18 GDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPA 77 + I + + + L + L + Sbjct: 37 SKIVEEILDA-DSVRAVLEKTFRTRNMPCGTEDSPLERAIAKARALLDQCASHGVGVHAF 95 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRG 137 + YP L + P +F +G A +AVVG R S G E L R Sbjct: 96 WEDHYPAALREIHEMPPVVFTKGA-VAHDRRAVAVVGPRRPSPRGRAIVSGVAEALVERN 154 Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 +T+ SGL G+D VAH A L+ G ++ VLG G+N PR +L E+ G ++S F Sbjct: 155 ITVVSGLTAGVDTVAHTAVLRRGGRTVTVLGTGINHYRPRGSRKLQQETAER-GMVLSPF 213 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 D P N R ++SG + +VVEA S + A AL GR V + N Sbjct: 214 LPDTPAARENLTLRTAVMSGYAAATIVVEAGEHSSARAQAHIALRHGRPVIFTQELLANQ 273 Query: 258 GSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 + + G + + E++E + L + + + Sbjct: 274 WAR--EHSERPGVYVASGIAELVEVVDSILAEATMTADEFIAALETSTFD 321 >UniRef50_Q4ZPT6 Unnamed protein product; similar to a putative DNA processing protein n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZPT6_PSEU2 Length = 455 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 111/315 (35%), Gaps = 10/315 (3%) Query: 31 QSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT- 89 + + L + ++ L + L + ++ YP L Sbjct: 53 PHAVLEG-WHDEKIPLLRIEQLLERGHALALA-LEKWSRAGLWVLTRSDADYPKALKHHL 110 Query: 90 -TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P LF G L+ + VVG+R + + +A G+T+ SG ARG+ Sbjct: 111 RNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGMTVVSGGARGV 170 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 D A + L G I ++ + L + + L+ LVS F + A N Sbjct: 171 DEAAMQGGLNEEGTVIGIMADSLLSAALAS--KWRNGLMSNNLVLVSPFFPEAGFNAGNA 228 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 RN+ I LS+ +VV + R G+ A L++ + NP S G + L+ Q Sbjct: 229 MARNKYIYCLSQAAVVVRSETRGGTWNGAIENLKKAWVPLWVKRD-TNPES-GNYALVSQ 286 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYS--PDQQDVALPFPELLANVGDEVTPVDV 326 GA + + ++ P++ P QD ++ + + + Sbjct: 287 GAQWLESAAKHVDVHTLSAQAKPESDPEMVPELAPTDQDASISEEDPVRSPPPRDEAPHQ 346 Query: 327 VAERAGQPVPEVVTQ 341 ++ G+ + Sbjct: 347 LSRDDGRSSQNANSA 361 >UniRef50_A4X0S0 SMF family protein n=2 Tax=Rhodobacteraceae RepID=A4X0S0_RHOS5 Length = 226 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 3/195 (1%) Query: 88 ATTDYPGALFVEGELHALHS-FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 + P AL++ G+ L + ++AVVGSR S GE+ R L +G+T+ SGLA Sbjct: 18 EKKNAPEALYMAGDAALLKTGTRVAVVGSRKSSENGEKRARALVRALVEQGITVVSGLAE 77 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID VAH+ A++ G +IAVLG L+ +P ++ RL ++++ +S+FP P Sbjct: 78 GIDTVAHETAIEAGGRTIAVLGTPLSQAYPAKNRRLL-DIIKKDHLAISQFPEGYPTKGE 136 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 NFPRRNR ++ + +VVEA +SG+ A+ GR V+ L + PG P LI Sbjct: 137 NFPRRNRTMALICDATIVVEAGEKSGTRHQGWEAIRLGRLVYLLENVVNKPGMTWPKELI 196 Query: 267 KQGAILVTEPEEILE 281 GA ++ E++ Sbjct: 197 AYGAQVLRR-EDLDN 210 >UniRef50_C3XNA9 Nucleotide binding protein n=3 Tax=Helicobacter RepID=C3XNA9_9HELI Length = 267 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 22/276 (7%) Query: 83 PPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITS 142 PP L L+ G L L + ++ ++G+R + Y + + + + L+ G+ I S Sbjct: 9 PPSLTHIK-ELETLYYCGNLGLLKAPKVTIIGTRNPNPYAQSFTQTLAQKLSKYGIVIVS 67 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G A GID +AH AL +I + + L+ I+P+ +A + + + +Q G ++S+F Sbjct: 68 GGALGIDIIAHANALPN---TIMISPSSLDYIYPKSNAPIISKIYKQ-GLILSQFTPTYT 123 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 P Y+F RN+I+ L + V++ +A L+SGS+ +A+ AL G+ +F P +G S G Sbjct: 124 PHRYSFLERNKIVISLGECVIIPQADLKSGSMQSAQYALSLGKTIFVPPHHLG--QSLGT 181 Query: 263 HWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEV 321 L K A ++ + + + L + P D +D L F + + Sbjct: 182 QSLAKNNQARVIWDIDVFVNELCASILDSNITPNLRASLRDSRDEILEFCQSNPFFEEAF 241 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 L E EL G I G Sbjct: 242 LRFGE--------------MLFEYELEGKIRRNNGR 263 >UniRef50_Q1UZN8 DNA processing chain A n=1 Tax=Candidatus Pelagibacter ubique HTCC1002 RepID=Q1UZN8_PELUB Length = 306 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 129/297 (43%), Gaps = 27/297 (9%) Query: 6 IWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES--- 62 + L L I +L + ++ ++D L Q ++ + I Sbjct: 16 LILALSKIKNLGKKRIFKLIFK---IKYLDEYSLSQLFDEFELYKKITKGDFEQIYQDSI 72 Query: 63 -SLCWLEQPNHHL--IPADSE-------FYPPQLLATTDYPGALFV--EGELHALHSFQL 110 L ++ N + I + E + + T ++P LF+ + +L + Sbjct: 73 SELDKMKSSNIKIYNIFENDEIGLFKDGLFSKNKIPTDEFPNQLFLINKSDLVIDSFKNI 132 Query: 111 A-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 ++G+R +S + L + I SGLARGID +AH+ ++++GV+IA+L N Sbjct: 133 FTIIGTRNNSAEAKDITEKVVTFLCDKQSIIISGLARGIDTIAHQKVIELDGVAIAILAN 192 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+TI+P + LA ++L G L++E+ + + R+RI + L+ ++++E+ + Sbjct: 193 GLDTIYPSENRELAKNIL-NKGILLTEYTFGLKAEKFRLIERDRIQAMLANDIVLIESDI 251 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK--QGAILVTEPEEILENLQ 284 + GS+ + A + + ++ + + G ++ I + EE + Sbjct: 252 KGGSMHAMKWAKKLNKRIWCF-----DMNASGNKEILNNYDNVIKFSNIEEFINKFN 303 >UniRef50_A1TY42 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1TY42_MARAV Length = 460 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 114/316 (36%), Gaps = 20/316 (6%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVV-----------LQQTGLTLRQAQRFLSFPRKS 59 L + R A W+ Q + + + +T + Q L+ Sbjct: 22 SEAKPLTNKEWGRFAFWLKNQEMVPEDLLTGDLSQKLAGWTDSKITSDRIQTLLNRGSAL 81 Query: 60 IESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRA 117 + + + ++ YP +L A D P F G + L+ +AV+GSR Sbjct: 82 AMA-MEKWTRSGLWVLTRSDSDYPKRLKARLGNDAPPVFFGCGNRNLLNQGGIAVIGSRK 140 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S ++ A G ++ SG A+G+D A AL+ G +I VL N L Sbjct: 141 TSDADLQFSHDLGAKSANDGRSVVSGGAKGVDEAAMLGALESEGTAIGVLANDLLRA--A 198 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 A+ L+ L+S F + A N +RN+ I LS + V + G+ Sbjct: 199 TSAKYRKYLMANNLVLLSPFYPEAGFNAGNAMQRNKYIYCLSDAAIAVHSGNSGGTWNGV 258 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 ++ + P +P G L+++GA + PE + E L D+ Sbjct: 259 LENIKHNWVPMWIK-PTDDPE-AGNATLVQKGAKWL--PENLAEIDLDHLLRTADSSAEQ 314 Query: 298 FYSPDQQDVALPFPEL 313 Q+ PE+ Sbjct: 315 GADLFAQNRTETVPEV 330 >UniRef50_C5BTJ3 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=C5BTJ3_TERTT Length = 462 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 65/401 (16%), Positives = 119/401 (29%), Gaps = 70/401 (17%) Query: 30 KQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT 89 + + + L+ + + ++ ++ YP +L Sbjct: 70 DPKALLQG-WHDARIGAERIIALLNRGHSLALA-MEKWQRAGLWVVTRSDPEYPKRLKQR 127 Query: 90 --TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARG 147 TD P LF G L++ LAV+GSR S + A G+ I SG ARG Sbjct: 128 LKTDSPPVLFGCGNKALLNAGGLAVIGSRNASEADLAFTEQVGAKAAKEGIAIVSGGARG 187 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 +D A A++ GV I V+ + L + L++ LVS F + A N Sbjct: 188 VDETAMLGAMKQGGVVIGVMADSLLKS--ATSIKWRKGLMDDHAVLVSPFYPEAGFSAGN 245 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG------NPGSEG 261 RN+ I L+ LV+ + + G+L A L++ + + ++G Sbjct: 246 AMARNKYIYCLADSSLVIHSGKKGGTLSGAEENLKKAWVPLWVKQTTDKDAANADLVTKG 305 Query: 262 PHWLIKQG-----AILVTE----PEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 WL A L+ ++ E + + D + E Sbjct: 306 GRWLEADTQAFRIAQLMCNDGGRANQVQEQMGDLFSTPAQPKFFAETESDPEIEPDHKKE 365 Query: 313 L-------------------------------------------LANVGDEVTPVDVVAE 329 + L + + + + E Sbjct: 366 VVESEIESAVNENQAYNVVNSEQTAESEAASSGSVDFYQLFVSELQYLAKKPVTAEALIE 425 Query: 330 RAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRT 370 ++ L E G + + R + + Sbjct: 426 STQLHKSQLTEWLKRAEEEGLLGKLN------RPVRYQVKN 460 >UniRef50_B8FVV3 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FVV3_DESHD Length = 413 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 113/284 (39%), Gaps = 19/284 (6%) Query: 11 MSISSLYGDDMVRIAHWV-----AKQSHIDA----VVLQQTGLTLRQAQRFLSFPRKSIE 61 I L + + + + + ++ GL+ ++QR ++ + Sbjct: 26 TEIRPLTIKQWNQFLRRMFNAEIKNPAALFEVGKEDLKKRLGLSDEESQRIQFLLSRAGQ 85 Query: 62 S--SLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRA 117 + L L + + YP +L + D P LF G++ + +VGSR Sbjct: 86 AVVELENLNNMGIFVTTRAEKSYPQRLKSVLKKDSPPVLFYSGDIELTQMEGIGIVGSRN 145 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 G + + A +G+T+ SG A+G+D VA AL+ G I++L + L Sbjct: 146 IDPKGLEFTKELGSKSAKQGLTVISGGAKGVDEVAQNEALRQGGKVISILADSLAQKI-- 203 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVT 236 +H +++EQ L++ F P YN +RN+ I LS +VV + + G+ Sbjct: 204 KHKEAREAIMEQRLLLLTSFHPRAPFTVYNAMQRNKYIYALSHIAVVVSSDYSKGGTWAG 263 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEIL 280 A L + + EG L+K GA + +++ Sbjct: 264 ATENLRNKWVPLFV--RKDDIVPEGNEKLLKMGANPL-SAKDLF 304 >UniRef50_C4XTH3 SMF protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTH3_DESMR Length = 336 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 25/307 (8%) Query: 20 DMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL--------------- 64 +++ + L + + A + L ++ + L Sbjct: 4 SILQFLQAKGSGEALLRRFLLFAAINGKNAAKSLCTSINNLSNELKINNDVASNIVNSAS 63 Query: 65 ------CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSR 116 L + N ++ S+ YP L+AT D P LF +G + + GSR Sbjct: 64 EAFFLHESLYKDNINVAWIGSDVYPHHLVATLKYDAPPVLFFKGCNKLFDNMGVGFCGSR 123 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S G R E L + + +TSG A G+D AHK AL+ G +I VL G+ Sbjct: 124 KASEKGLLITRRCVELLVDKKICVTSGYAHGVDMAAHKTALKNGGKTIFVLVEGIMRF-- 181 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + +A L + VS+FP ++ A N +RN I GLS +++VE+ + G+ Sbjct: 182 QHKREIAEFLSDDNYLAVSQFPPNLTWSARNAMKRNGTIIGLSDAMILVESGITGGTFAA 241 Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 + L++G+ +F + P +E IK G I + + + NL+ + N Sbjct: 242 GKETLQRGQPLFVIDYAAPGPSAEANPNFIKNGGIPIRGNSDGIPNLEKIFDITNQSRRN 301 Query: 297 SFYSPDQ 303 + D Sbjct: 302 DINTKDL 308 >UniRef50_C5SD09 SMF family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD09_CHRVI Length = 228 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 4/205 (1%) Query: 88 ATTDYPGALFVEGELHALHSFQ-LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 P +V G+ L + +++VGSR S G R LA G+ + SGLA Sbjct: 17 ERQYAPERFYVAGDPAILETGARVSIVGSRQASPEGLARARKLARRLAGEGIVVVSGLAL 76 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID AH A + G ++ V+G L+ +PR + L A + L+S+F + Sbjct: 77 GIDTAAHTATIAAGGRTVGVIGTPLDRSYPRENELLQARI-ATEHLLISQFTPGTKTQRF 135 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 +FP+RNR ++ +S +++EA SGSL AL GR ++ +P P ++ Sbjct: 136 HFPQRNRTMALISDATVIIEAGETSGSLSQGWEALRLGRLLYITRALADDPALRWPSKML 195 Query: 267 KQGAILVTEPE--EILENLQFGLHW 289 GA ++++ + LE L L Sbjct: 196 DHGAQILSDATLPDFLEALPSRLTP 220 >UniRef50_A6LJY6 SMF family protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJY6_THEM4 Length = 323 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 17/227 (7%) Query: 46 LRQAQRFL-----SFPRKSIESSLCWLEQPNHHLIPADSEFYPP---QLLATTDYPGALF 97 + +RF+ K ES + + ++ YP L LF Sbjct: 71 EKLIERFILIFEDKNLLKQAESEKKLCFEEEIQYVVYENATYPKKLHALRKLDHPVYVLF 130 Query: 98 VEGELHALHSFQLA-VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +G ++A ++GSR S G + + L+ + SGLA G D H+ + Sbjct: 131 YKGYWKDFDKLKIAAIIGSRNTSSEGLVLAKSLGKELSMNKIYNISGLALGADAAGHEGS 190 Query: 157 LQVNGVSIAVLGNGLNTI----HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 + G + AVLG GL+ I +P+ + +L +L G ++SE P P+ Y F R+ Sbjct: 191 M---GFTGAVLGQGLSKIEKRLYPKENIKLLFDIL-NKGIVLSEIPPSKKPIKYYFLCRD 246 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGS 259 RIIS L+ V+V+E+ + G++ T + A +++ I Sbjct: 247 RIISALADSVIVIESRKKGGTMKTFQYAASLNKKIIVWKKNIDGNLF 293 >UniRef50_A6UNG3 SMF family protein n=1 Tax=Methanococcus vannielii SB RepID=A6UNG3_METVS Length = 352 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 3/216 (1%) Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH--S 107 + + K + L+P +S YP +L D P L+ G Sbjct: 85 SKIKNKLFKRALEEYSMCIENKISLMPYESLNYPEKLRNIKDSPFLLYYIGNFPVEKDLE 144 Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +A+VGSR E L+ + SGLA GID H ++ G + AVL Sbjct: 145 KSIAIVGSRDSVKLSEDISYNTAFELSKSKIWNISGLALGIDSFGHLGSIDSEGYTGAVL 204 Query: 168 GNGL-NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 G GL + I P+ + L+ +L+ GG LVSE P R+R+ S L+ V VV+ Sbjct: 205 GQGLLDPIFPKENMELSEKILKMGGFLVSELPPSTKIDGIFLILRDRLQSALTDSVFVVQ 264 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 + G+L T A+ Q + V+ G EG Sbjct: 265 TGKKGGTLNTVNYAVNQSKTVYVFEPTEILDGFEGN 300 >UniRef50_C8W6B2 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6B2_DESAS Length = 453 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 117/326 (35%), Gaps = 13/326 (3%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ-TGLTLRQAQRFLSFPRK--SIESSL 64 L SL + + + ++ LT QR + + + L Sbjct: 32 FTLKEWDSLSHKIIESVMKRPGAFFYTTPEEWRECLNLTPENIQRIQNLLTEGGQLGIEL 91 Query: 65 CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYG 122 L + YP +L P LF G+ S +A+VGSR G Sbjct: 92 ERLSSLGIWVTTRAEASYPARLKKVLRQKSPVVLFGAGDASLFQSEGVAIVGSRNVDEIG 151 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + T G+T+ SG ARG+D +A +AL+ G I+VL N + T R Sbjct: 152 SYFAEKLAGRCVTEGLTVVSGGARGVDMIAQNSALRSGGKVISVLSNSMETSI--RQREN 209 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCAL 241 +++ L+S P YN RN+ I LS +VV + + G+ A L Sbjct: 210 REAIVAGRLLLLSSTHPKAPFNVYNAMDRNKYIYALSHYAVVVSSEENKGGTWTGATENL 269 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE---PEEILENLQFGLHWLPDAPENSF 298 + G + +G G + L+++GAI +E + + + Sbjct: 270 KAGWVPLFV--RVGGQVPAGNNRLLEKGAIAFDSEVLADEAVILRNWLSDNIQVIVNYES 327 Query: 299 YSPDQQDVALPFPELLANVGDEVTPV 324 ++ +++ P + + + V Sbjct: 328 SKRNENNISSPKKDHQLAFRFDDSTV 353 >UniRef50_A3J6W9 DNA processing chain A n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6W9_9FLAO Length = 311 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 118/318 (37%), Gaps = 19/318 (5%) Query: 1 MVDT-EIWLRLMSISSLYGDDMVR---IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFP 56 M E + L +I + M + + + L+ + ++ L Sbjct: 1 MEKYIENIIALANIKGIGASFMKQHSHLISLYR------DNLEMLLSLSNKIDEKDLQVN 54 Query: 57 RKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR 116 + +I YP LL D P L+ +G + LH +AV+G+R Sbjct: 55 ILKARDIISECNANGIKIISYLDADYPKLLLEIKDPPPVLYAKGNIELLH-KSIAVIGTR 113 Query: 117 AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN--TI 174 + G + + + + I +GL GID + + +V I V+ GLN Sbjct: 114 KSTELGNKIAKKVGQYFSEH-WAICNGLVEGIDKHSITNSDEVFSNVIGVISGGLNFEKT 172 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 + LA +L++ G L+SE + ++ + +RI +GLS+G+++++++ GS Sbjct: 173 SSKITKELAKKVLDRNGLLLSENEPNKKEDQFSGSKASRIQAGLSRGLILIQSSSNGGSK 232 Query: 235 VTARCALEQGREVFALPGPIGNP-----GSEGPHWLIKQGAILVTEPEEILENLQFGLHW 289 T + E R + + + G L+ + + + +I Sbjct: 233 YTLKTFSELNRPIGIIDFKTNSEYNNSDEFSGNRLLLTELKEGLQKMCDIKSKELIKTRE 292 Query: 290 LPDAPENSFYSPDQQDVA 307 + N Y + ++ Sbjct: 293 IISIAGNEDYKAFEDSLS 310 >UniRef50_UPI00017439D3 DNA uptake protein, SMF family n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017439D3 Length = 169 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 2/166 (1%) Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 T+ SGLA GID VA K AL ++V+G GL+ ++P + L + E G +VSE+P Sbjct: 2 TLISGLAEGIDTVALKTALDKGIEVVSVVGTGLDIVYPYDNRGLWERIAE-NGTIVSEYP 60 Query: 199 LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPG 258 L P + FPRRNRII+G+S G+LV E+ + G+L+TA RE+FA+PG I P Sbjct: 61 LGTQPTRWTFPRRNRIIAGMSDGILVAESFKKGGALITAELGFSMNREIFAIPGFINYPS 120 Query: 259 SEGPHWLIKQG-AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 EG + LIK A L T +I + + + Sbjct: 121 FEGCNDLIKNNKAKLTTCGNDIAIEFLWDIKKEKSKLQKLTEEEQI 166 >UniRef50_B7JUP3 Putative uncharacterized protein n=2 Tax=Cyanobacteria RepID=B7JUP3_CYAP8 Length = 426 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 122/329 (37%), Gaps = 19/329 (5%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRK--SIESSLCWLEQPNHHLIPADSEFYPPQLLAT--T 90 L Q + ++R ++ ++ + ++ +I YP +L Sbjct: 54 FISRLSQLTIGKLDSKRLVALLQRGGLLALTVEKWLNQGLWIISRGDADYPLRLKQQLKY 113 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG 150 P L+ G L LAVVGSR G + E A + + + SG A+G+D Sbjct: 114 LAPPILYGIGNKDLLSKGGLAVVGSRNVDQEGLDYTYHVVEACAEQNIQVISGGAKGVDQ 173 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 + L+V G I VL N L + S+ E L+S + N R Sbjct: 174 ASMLGTLKVGGTVIGVLANNLLKA--SVDGKYRTSIKEGKLTLISAVDPNASFHVGNAMR 231 Query: 211 RNRIISGLSKGVLVVEAALR-SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ I L+ LV+ A G+ A AL ++V L I SEG L+KQG Sbjct: 232 RNKYIYALANYGLVISADYNTGGTWAGATEALNTIKDVPIL-VRIQGTISEGNQHLLKQG 290 Query: 270 AILVTE------PEEILEN----LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 A E +E++E + + N F + V+ EL D Sbjct: 291 AKPFPETPWNRPIKELIETTVSEYKSIEFRQNNTQLNLFSQDNHSVVSDNKDELTPQDPD 350 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELA 348 + D + + + V+ +L+ EL Sbjct: 351 ISSRDDALKSASERLYYAVLPIILQ-ELN 378 >UniRef50_A8FL55 DNA processing protein A n=16 Tax=Campylobacter RepID=A8FL55_CAMJ8 Length = 257 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 8/233 (3%) Query: 97 FVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 +G L L ++A++GSR S Y + L + + SG A G+D A AA Sbjct: 25 HYKGNLSLLKQDKIAIIGSRRMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAA 84 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 + +I + NGL+ I+PR + ++ + E AL SE+ D P Y+F RNR++ Sbjct: 85 MPN---TIGIFANGLDQIYPRTNEKIIKQIYENALAL-SEYEDDYLPKNYDFLLRNRLVI 140 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTE 275 LSK V+V +A ++SGS+ +A+ ALE + ++ LP +G S G + L+K+ A L+ + Sbjct: 141 ALSKAVVVAQADIKSGSMQSAKLALELNKPLYVLPQRLG--ESTGTNLLLKENKAKLICD 198 Query: 276 PEEIL-ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 +E + E ++ + + + ++ + ++ + Sbjct: 199 FKEFVSEFASIDINQDEFLEFCKKGVSVDEALKIYGQKVYEYELEGKISIEGL 251 >UniRef50_C8SAK1 SMF family protein n=2 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAK1_FERPL Length = 246 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 3/219 (1%) Query: 88 ATTDYPGALFVEGELH-ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 P L++ G + L ++AV+G+R S G + L GV + SGLAR Sbjct: 28 ERRYAPKELYIAGSMKIPLPEPRVAVIGTRKPSPKGIEAASKITKVLVEHGVVVVSGLAR 87 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID VAHK A++ G +IAVLG LN +P + L ++++ A +S++P+ Sbjct: 88 GIDTVAHKTAIENGGKTIAVLGTPLNKFYPAENKPLQELIMKEHLA-ISQYPIGYITKPK 146 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 +F RNR ++ +S ++VEA SG + L GR +F + + ++ Sbjct: 147 HFVLRNRTMALISNASIIVEAGESSGVISQGWETLRLGRPLFFWKSLVE-KDFKWVREMM 205 Query: 267 KQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 K GA ++ ++ ++ L + P++ D Sbjct: 206 KYGACVLQNVNDLKRAIREMLPPPAEIPKSELRVVDLSS 244 >UniRef50_C3XE53 DNA processing chain A n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE53_9HELI Length = 269 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 29/270 (10%) Query: 87 LATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLAR 146 +F G L L ++A++G+R+ + Y ++ TL+ +G I SG A Sbjct: 22 KHLYKAFNGVFARGHLSLLKKPKVAIIGTRSPNQYAKQITTQLANTLSQKGFVIVSGGAI 81 Query: 147 GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAY 206 GID +AH L N +I +L G++ I+P+ +A L + L Q G ++SE+ P+ + Sbjct: 82 GIDSIAH---LNANNNAILILPCGIDAIYPKENATLINN-LAQNGLVLSEYGGTYKPMKH 137 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI 266 F RNR+I S +++ +A ++SGS +A A+ + +F LP + S G L+ Sbjct: 138 TFLERNRLIIAWSDIIIIPQADIKSGSSSSANLAITLQKPLFVLPHRLH--ESRGTQELL 195 Query: 267 K-QGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 + Q A + + E + N Y + +D L F D + Sbjct: 196 QAQKAQCIYDIESFV--------KNACEIHNIAYMQEIKDPLLEFAYNNGLFEDALKLFG 247 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + EL G I Sbjct: 248 DLV--------------FAYELEGKIKRNG 263 >UniRef50_D0SFU0 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SFU0_ACIJO Length = 433 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 119/402 (29%), Gaps = 64/402 (15%) Query: 21 MVRIAHWVAKQSHIDAVVLQQTG------LTLRQAQRFLSFPRKSIESSLCWLEQPNHHL 74 + + S + + + + + L+ + + + + + Sbjct: 39 ARYLWKIGKQPSDLLSSDAKDLIEKCSNLINPERLNILLNRGFL-LSQVIELWQSRSIWV 97 Query: 75 IPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132 I + YP + P L+ G L L+S LAV+GSR + + Sbjct: 98 ISRADKAYPRLIKDKLKDQSPPILYGFGNLDLLNSGGLAVIGSRKIDDSIYNYSNNIGKL 157 Query: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGA 192 A G + SG A+G+D A AL G V+ L L+ Sbjct: 158 AAKFGTKVISGGAKGVDQAAMYGALHEGGYVCEVMAENLERAVLDAGR--RNYLMSGNLI 215 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 LVS + + +RN++I LS LVV + G T A EQ ++ +P Sbjct: 216 LVSAYDPKASFNIGHAMQRNKLIYALSDASLVVASDFNKGG--TWAGAAEQLDKLKFVPV 273 Query: 253 PIG-NPGSEGPHWLIKQGAILVTEPEEI-------------------------------- 279 + + S+G L K+GAI P++I Sbjct: 274 YVRLDNESKGLRELYKKGAIPWPNPQDINSFRQIFDVSNLANNNLNLSLFDQEDIVKEFK 333 Query: 280 ------------LENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVV 327 ++ ++ ++ N+ D + Sbjct: 334 VSDIAQQNLTNTIDESTKSHTPSATNTSEIEVQKPADELFEFAANIILNLLDTPLKDSEI 393 Query: 328 AERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRR 369 ++ + + L L I R + ++ R Sbjct: 394 SQALNISLAQTKLWLSRLVEEERIEK------RTKPVTYIVR 429 >UniRef50_A1VRI3 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A1VRI3_POLNA Length = 456 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 16/312 (5%) Query: 41 QTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFV 98 + + QR L + ++ + ++ YP +L + P L+ Sbjct: 65 APVIEESRLQRLLGRGFL-LSQAIERWQARAIWVVSRADANYPRRLKERLRENAPAILYG 123 Query: 99 EGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 GE+ L + LAVVGSR + A TI SG A+GID A + AL+ Sbjct: 124 CGEIGLLDAGGLAVVGSRHVDEALIEYTMTVGRIAARARRTIVSGGAKGIDQAAMRGALE 183 Query: 159 VNGVSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G VL + L + R H L L+E LVS + + +RN++I Sbjct: 184 AGGKVCGVLADSLEKTVMNREHRNL---LMEGQLVLVSPYDPSAGFNVGHAMQRNKLIYA 240 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN--PGSEGPHWLIKQGAILVTE 275 L+ LVV + L G T A+EQ ++ +P + + SEG L K+GA+ + Sbjct: 241 LADAALVVSSDLNKGG--TWAGAVEQLDKLRLVPVYVRSTGEASEGLEALRKKGAVTWPD 298 Query: 276 PEEILEN---LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAG 332 P + + +S + V+ P +A D + +A Sbjct: 299 PLDADSFQTVFEAITPVSETQVSAELFSSGEPPVSAPAA--MAVFPDAQPLLSAIAIAKD 356 Query: 333 QPVPEVVTQLLE 344 Q V EV +Q LE Sbjct: 357 QSVTEVASQTLE 368 >UniRef50_UPI00016B2077 DNA protecting protein DprA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2077 Length = 167 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 4/170 (2%) Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 ++SEF V PL +NF +RNRIISGL+ V+++EAA RSG+L TA AL QG++VFA+PG Sbjct: 2 IISEFQEGVEPLPFNFLKRNRIISGLADAVIIIEAASRSGTLNTATHALNQGKDVFAVPG 61 Query: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE 312 I +P S G + L+KQGAI T E+ILE ++ +N Sbjct: 62 NITSPLSAGCNALLKQGAIPATSVEDILE----VINLQNQENQNPSQISLPVGDTPLENA 117 Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 ++ + V D + ++A + + T L LE+ G I + LR Sbjct: 118 IIELLNQGVRDGDELQKQAKAEISDFNTTLTMLEINGIIKPLGANKWCLR 167 >UniRef50_A4AS39 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS39_9FLAO Length = 428 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 112/328 (34%), Gaps = 19/328 (5%) Query: 14 SSLYGDDMVRIAHWVAK----QSHIDAVVLQQT-------GLTLRQAQRFLSFPRKSIES 62 L + R+ W+ + + L + + + L Sbjct: 25 KPLSLLEWNRMVRWLQSKKLKPEDLLTIDLNKLLINWNDTTIPKNRIIELLDRKMALAIR 84 Query: 63 SLCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 L + +I +FYP L P LF G+ + L+ + +VGSR S Sbjct: 85 -LEKWSKAGVWIINRSDKFYPNSLKNKLKDRVPPILFGIGDKNLLNKNYIGIVGSRHISE 143 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 + + + L + + SG ARGID + L+ NG ++ V+ + L + Sbjct: 144 TDIKVTKDIVKQLYAQNYGVVSGGARGIDEHSMTGILECNGYALGVVADSLIKK--SSSS 201 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 +++ L+S F +V N RN+ I LS+ +VV++ + G+ A Sbjct: 202 IYRKHIIDNKLVLISPFNPEVGFNVGNAMGRNKFIYILSQAAIVVKSETKGGTWEGANEN 261 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILV---TEPEEILENLQFGLHWLPDAPENS 297 L+ + PI N ++G ++++G + I+ + + Sbjct: 262 LKNNWAPLWVVKPIENKTNKGNFEIVRKGGRFLHEGFNVSNIINPKDKSIKAQGSLFNYN 321 Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVD 325 + V + + D Sbjct: 322 IKIEESNIVNESEVKSIVIKSKTSLSPD 349 >UniRef50_Q8YRJ4 Alr3452 protein n=2 Tax=Cyanobacteria RepID=Q8YRJ4_ANASP Length = 415 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 129/361 (35%), Gaps = 35/361 (9%) Query: 24 IAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIPA 77 + + +H+ L+Q ++ +R L+ + SL ++ Sbjct: 43 LLQQEMRPAHLLESTVKEQLKQLHISKLDPERLLALLARGAMLSLAVEKWTSRGLWILGR 102 Query: 78 DSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L P L+ G++ L LA+VGSR + R ET A Sbjct: 103 SDAQYPKLLKQRLKHSAPAILYGVGKIELLSQGGLAIVGSRDVDEELLAYTRKVAETSAL 162 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G+ + SG ARG+D A + L G S+ VL + L +++ +SL E AL+S Sbjct: 163 DGMQVISGAARGVDQEAMLSILNAGGTSVGVLADSLTKA--AVNSKYRSSLKEGRLALIS 220 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCALEQGREVFALPGPI 254 + D N RN+ I L+ LVV ++ + G+ A AL + +E+ + Sbjct: 221 SYDPDAGFNTGNAMGRNKYIYALADYALVVNSSFGQGGTWAGAVEALSRLKEIPVF-VRM 279 Query: 255 GNPGSEGPHWLIKQGAILVT-------------EPEEILENLQFGLHWLPDAPENSFYSP 301 SEG L QGA + ++E++ + LP S Sbjct: 280 APTASEGNRQLHNQGAKPFPPEPWNGSLNKLLAKASSLVESIDTNIIQLPPEKSQDTQSH 339 Query: 302 DQQDVALPFPELLANVGD-------EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAV 354 +++ + V + +A+ ++ L + G + Sbjct: 340 ---ELSSTPQNIYEAVLPFILGHLQQPKDAKTLAQCLEVQPSQMQEWLKKAVQEGKVRKT 396 Query: 355 P 355 Sbjct: 397 N 397 >UniRef50_B7JTA5 SMF family protein n=6 Tax=Bacillus cereus RepID=B7JTA5_BACC0 Length = 284 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 7/186 (3%) Query: 92 YPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G++ L + ++A+VG+R S + I SGLA+GID Sbjct: 104 MPLFMYSKGDISLLEVNQKRVAIVGTRHPSQKAIAITKKLTRKFVEDNYVIVSGLAKGID 163 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 ++H+ A+ G +IAVL N I+PR + LA +L+ GG LV+ +F Sbjct: 164 TISHETAIVHKGKTIAVLPTNFNKIYPRENQELAKKILD-GGLLVTSIGPKENTYKSSFL 222 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S V+V E L+SG++ T R A E +++ + + + G Sbjct: 223 DRNQYLANISDIVVVTETNLKSGTMNTIRNASEASKKILFV----DQEDELINNKIRGFG 278 Query: 270 AILVTE 275 ++ + Sbjct: 279 GEMLND 284 >UniRef50_Q6AR88 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AR88_DESPS Length = 428 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 115/363 (31%), Gaps = 31/363 (8%) Query: 11 MSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL------ 64 S L D ++ W+ +LQQ + A + ++ +E+ L Sbjct: 23 SSTKPLSQGDYNKLVDWLISSGMRPKDLLQQENIDP--AAKGSGIYQQRLEALLGRGVQL 80 Query: 65 ----CWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAH 118 ++ +I YP + P LF G+ L LA++GSR Sbjct: 81 GFAVEEWQRNGIWIISRSDTDYPTRYKNHLGKQAPPLLFGVGDRSLLTGGGLAIIGSRNV 140 Query: 119 SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 G + R A + + SG ARG+D + AAL G++I VL + L Sbjct: 141 DEIGGNFTREVGALCAQNRMPVVSGGARGVDQFSMTAALDAGGMTIGVLADSLLKK--SL 198 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA-LRSGSLVTA 237 ++ L+S + RN++I ++ LVV A + G+ A Sbjct: 199 ERTARKAIARGRLLLISACHPNARFTVGTAMGRNKLIYAMADYGLVVSAEHKKGGTWAGA 258 Query: 238 RCAL--EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPE 295 L E VF G P G L+ GAI + + + Sbjct: 259 DEELKREHSIPVFVRQGN-DVPL--GNSKLLGLGAIAWPDKVDHQNLRGQLTELSSQCAQ 315 Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQ--------PVPEVVTQLLELEL 347 S + A + + + E + V V +L L L Sbjct: 316 KSTQKNMSLLDFQERQKEPAKELPKAESI-ELTESSNVVEDTAAKHSVTTVYETVLPLIL 374 Query: 348 AGW 350 Sbjct: 375 EKL 377 >UniRef50_C7WQK9 SMF family protein n=1 Tax=Enterococcus faecalis AR01/DG RepID=C7WQK9_ENTFA Length = 288 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 7/185 (3%) Query: 92 YPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGID 149 P ++ +G+ L ++A++G+R S + + G I SGLA G D Sbjct: 105 MPLFIYCKGDTSLLTKDKKRMAIIGTRHPSKKTIEITQKLTQKFVEAGFVIVSGLAEGTD 164 Query: 150 GVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP 209 +AH+ AL+ NG +IA+L N I+P+ + +L+ ++E G L++ +F Sbjct: 165 TIAHETALKNNGKTIAILPTNFNKIYPKSNKKLSDKIVE-DGLLLTAIGPKENTYKSSFL 223 Query: 210 RRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG 269 RN+ ++ +S VLV E L+SG++ T R A E +++ + + + + + G Sbjct: 224 ERNQYVANVSDVVLVTETNLKSGTMNTIRNASEAAKKILFV----DQNDEKINNKIYEFG 279 Query: 270 AILVT 274 ++ Sbjct: 280 GEMLN 284 >UniRef50_B4VSY8 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VSY8_9CYAN Length = 426 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 14/263 (5%) Query: 24 IAHWVAKQSHIDAVVLQ----QTGLTLRQAQRFLSFPRKSIESSL--CWLEQPNHHLIPA 77 + + + L+ Q + +QR ++ + + SL ++ Sbjct: 43 LLEEHLNPADLLNSTLKNRLSQITINKLDSQRLIALLERGVMLSLAVEKWTNQGLWILGR 102 Query: 78 DSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAT 135 YP L + P L+ G+ L LA+VGSR G + + A Sbjct: 103 GDADYPQCLKQRLKHNAPAILYGIGKRELLSQAGLAIVGSREVDQEGLNYTERVVQICAE 162 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 +G+ + SG ARG+D + L G ++ VL + L ++ A + E LVS Sbjct: 163 QGINVISGGARGVDQASMLGILAAGGNAVGVLADSLTKA--AVASKYRAGIKEGRLTLVS 220 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG 255 + D A N RN+ I L+ LV+ +A+ G T A E R+V +P + Sbjct: 221 AYDPDASFSAGNAMGRNKYIYALADYALVISSAVGKGG--TWAGATEVLRKVQDVPVFVR 278 Query: 256 NPGS--EGPHWLIKQGAILVTEP 276 G+ EG L+++G I+ E Sbjct: 279 MQGTVPEGNQKLLEKGGIVFPEI 301 >UniRef50_UPI0001C392BE hypothetical protein AplaP_07437 n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C392BE Length = 331 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 12/255 (4%) Query: 79 SEFYPPQLLATTDY--PGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR 136 YP +L Y P L+ G L L+ LA+VGSR + + + A + Sbjct: 1 DRHYPQRLKQHLKYLSPPILYGVGNLELLNKGGLAIVGSRNVNEAVLSYTQQLAHISAQQ 60 Query: 137 GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSE 196 + + SG ARGID + L+ G +I VL N L + SL E AL+S Sbjct: 61 NIQVISGGARGIDKCGMLSCLEAGGTTIGVLANSLGKA--SLESDYRQSLDEDRLALISP 118 Query: 197 FPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCALEQGREVFALPGPI- 254 + + N RN+ I L+ +V+ A+ + G+ A AL +++ +P + Sbjct: 119 YDPEAGFHVGNAMGRNKYIYALADYAVVISASFNKGGTWSGAVEAL---KKLPNIPVFVC 175 Query: 255 GNPGSEGPHWLIKQGAILVTEPE---EILENLQFGLHWLPDAPENSFYSPDQQDVALPFP 311 N ++G L+K GA E ++L+ L+ G E Sbjct: 176 QNSQTQGNMELLKLGAKPFPEMSGKLDLLDILKPGETEDAVEVEQMALDFAVNLTPENPA 235 Query: 312 ELLANVGDEVTPVDV 326 V TP + Sbjct: 236 PTPIYVDVNPTPTEA 250 >UniRef50_Q7MQZ2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQZ2_WOLSU Length = 259 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 30/263 (11%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 LF G+L L ++A+VG+R + Y + R + RGV + SG A G+D +AH+A Sbjct: 22 LFYHGDLSLLKRPKVAIVGTRHPNAYTKAMTRELARFWSERGVVVVSGGAFGVDVLAHEA 81 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 A +I + + L+ +P H + + + G L+SE+ P Y F RNR+I Sbjct: 82 AFPS---TILISPSSLDLPYPPSHKPIIERI-AKEGLLLSEYESSFMPKRYTFLERNRLI 137 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLI-KQGAILVT 274 LS +++ +A L+SGS+ +A A++ G+ ++ LP + S G L+ ++ A+ + Sbjct: 138 IALSSLIIIPQADLKSGSMQSAHTAIKLGKPLYVLPHRL--KESLGTQSLLERELALPLY 195 Query: 275 EPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP 334 P+ +LE L + +LL + + VA Sbjct: 196 NPQTLLERHFPELAK---------------PLKKSKDDLLLYAQTLPSYEEAVAR----- 235 Query: 335 VPEVVTQLLELELAGWIAAVPGG 357 ++ E EL G I G Sbjct: 236 ---FGERIFEYELEGKILIKEGR 255 >UniRef50_D1YP58 Putative DNA protecting protein DprA n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YP58_9FIRM Length = 270 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 14/200 (7%) Query: 58 KSIESSLCWLEQPNHHLIPADSEFYP---PQLLATTDYPGALFVEGELHALH--SFQLAV 112 + + + +I + +P + A D P LF +G++ LH + +AV Sbjct: 3 SQLTKEIEANTALD-GVICIFDQDFPVINSTVKAKGDRPYLLFYKGDISLLHHLNNNVAV 61 Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +G + S ++ R L + I SGLA+G D +AH+ +++ G +IA+L + +N Sbjct: 62 IGHTSPSENIQKRERKIISQLVKKQQVIVSGLAKGCDVIAHEECMRLGGKTIAILPSSIN 121 Query: 173 TIHPRRHARLAASLLEQGGALVSEFP-LDVPPL---AYNFPRRNRIISGLSKGVLVVEAA 228 + P+ HA A ++E GG L+SE+ P A F R+R+ + +K V+++ + Sbjct: 122 EVLPKEHAERAKQIVETGGLLISEYYAPPSNPRFEMAKRFIDRDRLQAMFAKAVILIASY 181 Query: 229 L----RSGSLVTARCALEQG 244 SG+ AL+ Sbjct: 182 AVHKGDSGARHAMNKALKYK 201 >UniRef50_Q4A8B6 DNA processing protein SMF n=4 Tax=Mycoplasma RepID=Q4A8B6_MYCH7 Length = 259 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 92/243 (37%), Gaps = 11/243 (4%) Query: 41 QTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG 100 L Q ++ L+ I E YP + P LF +G Sbjct: 15 DYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQG 74 Query: 101 ELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 ++ L + + A++G + +S + + + + R + +T+G +G++ + Sbjct: 75 KIEFLENKNPKSALIGEKYNSK-IQEFFNKSLDQIIKRHILVTNGY-KGVEQKIMEYYRL 132 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 IAV NG+ P + + ++ ++SE+P RNR+++ L Sbjct: 133 YEAPIIAVSANGIENPWPFENFQHYKNI-----LIISEYPTGCNVNKKRLIERNRLVAAL 187 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFAL--PGPIGNPGSEGPHWLIKQGAILVTEP 276 + ++V GS L+ G+E++ G LI QGA +TE Sbjct: 188 ANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYAGCSDLIYQGANWITEI 247 Query: 277 EEI 279 +++ Sbjct: 248 KDV 250 >UniRef50_B8F7U3 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F7U3_HAEPS Length = 331 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 119/314 (37%), Gaps = 21/314 (6%) Query: 14 SSLYGDDMVR-IAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 + + + + ++ + +L ++ ++ + +IE + L Sbjct: 17 NGIGDAWINKNLSKTKTSPLELIVELLAKSVKKETVSEEIFLQRKSNIEKQILLLGDSCD 76 Query: 73 HLIPADSEFYPPQLLATTDY--PGALFVEGELHALHSFQ--LAVVGSRAHSWYGERWGRL 128 ++ E +P A + P LF +G+L L +AV+G E R Sbjct: 77 GVVAIGDEKFPTHRGAVKESEQPNVLFYKGDLGLLSLENTNVAVIGVLTPDEDTEMDERK 136 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L + I SGLA+G D +AH L+ G ++A+L + LN I P +H A + E Sbjct: 137 IVSLLVQQDAVIVSGLAQGCDFIAHDQTLKFGGATVAILPSPLNNIMPVKHREFAQQIFE 196 Query: 189 QGGALVSEFP--LDVPPL-AYNFPRRNRIISGLSKGVLVVEA-----------ALRSGSL 234 GG L++E+ + + RR+R+ + S V++ + + SGS Sbjct: 197 TGGLLITEYYDAPSTKMELSSRYIRRDRLQALFSDIVILSASYTPNSVDPTALKIDSGSR 256 Query: 235 VTARCALEQG--REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 +LE R V NP + ++K ++V +P + + L+ Sbjct: 257 HAMEKSLEYSIPRAVIYHEKYQRNPKYDLNRQVMKDAKVIVIDPTNPMPMITQILNLDKS 316 Query: 293 APENSFYSPDQQDV 306 N Q + Sbjct: 317 PSSNQESDDGQMGL 330 >UniRef50_UPI0000E0E615 Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E615 Length = 322 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 19/267 (7%) Query: 52 FLSFPRKSIESSLCWLEQPNH--HLIPADSEFYPPQLLATTDY--PGALFVEGELHAL-- 105 F K +++ + L E +P + P ALF +G++ L Sbjct: 52 LCRFNDKQAAILSELIKRKDVIDGLTTIVDEDFPIHRGTVKNSQKPVALFYQGDIRLLDP 111 Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +AV+G + E+ + L ++ + I SGLA G D +AHK A+ G ++A Sbjct: 112 CKPSVAVIGLLDPDFSTEKSEISLVDELVSKNIIIVSGLANGCDAIAHKQAVIKQGKTVA 171 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL---AYNFPRRNRIISGLSKGV 222 VL + L+ I PR + LA ++E GG LV+E+ D + R+R+ + S V Sbjct: 172 VLPSSLHNILPRGNQSLAKEIVESGGLLVTEYMHDASSKLEFTARYQERDRLQALFSDAV 231 Query: 223 LVVEAALR------SGSLVTARCALEQ--GREVF-ALPGPIGNPGSEGPHWLI-KQGAIL 272 ++V + + SG+ + AL+ R V + NP + LI K I Sbjct: 232 ILVASYAKNNQGNDSGARLAMEYALQYDIKRAVMYNISIDSRNPKYDLNRQLILKDTNIH 291 Query: 273 VTEPEEILENLQFGLHWLPDAPENSFY 299 V +PE+ + L L + Sbjct: 292 VIKPEDTMCLAGNLLDKLITEKSKNIQ 318 >UniRef50_A6GCQ9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCQ9_9DELT Length = 297 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 114/260 (43%), Gaps = 21/260 (8%) Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 AVVGSRA E +RG ++ SG A GIDG AH+AAL +AVL G Sbjct: 50 AVVGSRAAHRAYLDCLPAVLELARSRGWSLVSGGALGIDGGAHQAALDRRVAQLAVLPCG 109 Query: 171 LNTIHPRRHARLAASLLE--QGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 + +P RHA L ++L+ + G L ++ P+ P F RN I+ GL+ VLVVEA Sbjct: 110 RDQPYPSRHAALFTAMLDAPEAGLLFAQ-PVGTSPTRAMFASRNAIVVGLASAVLVVEAR 168 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP-----EEILENL 283 RSG++ T R AL +G + A+ G S G LI GA + P ++ L Sbjct: 169 SRSGTMGTGRLALGRGVPLAAVSG------SAGAGRLIAAGARGLPRPGGPTHRDLRAAL 222 Query: 284 Q-FGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQL 342 F L + + L G +D A ++QL Sbjct: 223 DTFLGAALDPQRTIEEPTRPWPEALSDLRARLRAAGPRGLSID-----ACPDPEGTLSQL 277 Query: 343 LELELAGWI-AAVPGGYVRL 361 E EL G + A PG +V L Sbjct: 278 CEAELLGLVTEATPGRWVAL 297 >UniRef50_A8L0W4 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W4_FRASN Length = 302 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 112/295 (37%), Gaps = 33/295 (11%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + L ++ + + + P Sbjct: 29 DERHARAALTALP---ARIWPSATDSRTDPVEVWKGLAPEH-------------PGVDPA 72 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDY-PGALFVEG--ELHALHSFQLAVVGSRAH 118 L + +P L T P L+ G +L L + + G+R Sbjct: 73 RLLATATDAGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGARLC 132 Query: 119 SWYGERW----GRLFCETLATRGVTITS-GLARGIDGVAHKAALQVNGVSIAVLG--NGL 171 S YG+ LA + VTIT+ G+ GID A + A ++AVL G+ Sbjct: 133 SEYGQAVTAGLAYDLTTPLAAQPVTITAAGIGEGIDAAALRIAATHR-RAVAVLTATTGI 191 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + L + + GG ++ +PP + + R R+++ L++ ++VE+ R Sbjct: 192 TRY----NRTLLTDVAD-GGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLVESTTRG 246 Query: 232 GSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQF 285 + TA+ A + R V A+PGPIG+ S GP+ L+ +G A LVT E+I L Sbjct: 247 YAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQ 301 >UniRef50_A5UX61 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=3 Tax=Bacteria RepID=A5UX61_ROSS1 Length = 454 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 87/238 (36%), Gaps = 7/238 (2%) Query: 64 LCWLEQPNHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWY 121 + ++ YP +L P L+ G L LA++GSR + + Sbjct: 88 VEKWVNKGLWVMSRSDADYPQRLKTRLGRTAPPLLYGAGNRQLLGQGGLAILGSRNSAAH 147 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + R A +G+ + SG ARG+D A +AAL GV I VL + L Sbjct: 148 ALAFTRRIAGMCARQGMPVLSGAARGVDSEAMQAALDARGVVIGVLADSLLKA--AVGRN 205 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL-RSGSLVTARCA 240 ++ LVS + N RN+ I LS LVV AAL G+ A Sbjct: 206 YRQAVRNGNLVLVSACDPEAGFTVGNAMGRNKYIYALSDYALVVSAALGEGGAWSGAVEN 265 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSF 298 L + + I + G L GA+ +E + E++ L D Sbjct: 266 LTKRWVPLFV--WIDDESLPGNQRLRDMGALPFSENQCAGESVHDLFKRLADETTPQH 321 >UniRef50_C3XN39 DNA processing protein chainA n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XN39_9HELI Length = 354 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 102/285 (35%), Gaps = 28/285 (9%) Query: 31 QSHIDAVVLQQTGLTL--RQAQRFLSFPRKSIESSLCWL---EQPNHHLIPADSEFYPP- 84 I+ + + + ++ + F + + L + E +P Sbjct: 25 IEEINKLNKKIEEINKLNKKIEEIKKFDFNNEMEEIGNLLDNSKEGIRYTAFGDEDFPEC 84 Query: 85 ---QLLATTDYPGALFVEGELHALHSFQ--LAVVGSRAHSWYGERWGRLFCETLATRGVT 139 ++ D P L EG+L L +AV+G + ++ + + T Sbjct: 85 RFERIENKNDLPVFLAYEGDLKLLSKNNFNIAVIGILEPTEEIKQLEKEILGEILKYDAT 144 Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQ-GGALVSEFP 198 I SGLA G D +AHK+ N +IA+L + L+ I P+ + LA+ ++ G L+SE+ Sbjct: 145 IISGLALGCDTIAHKSVSDQNC-TIAILPSTLDNILPKENRELASEIVRNKNGLLISEYY 203 Query: 199 LDVPPLAY---NFPRRNRIISGLSKGVLVVEAALR----------SGSLVTARCALEQG- 244 + + +R+R+ + S V++ + SGS A + G Sbjct: 204 KEAENKFEYINRYIKRDRLQALFSDMVILTASYSEKDSKRDKKKDSGSRHAMGKAKDYGI 263 Query: 245 -REVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLH 288 R V + LI + E+++ Sbjct: 264 KRAVMYDETIFDDEKFNLNRELIAMKMSIAKLDEQVIMEFNKSDK 308 >UniRef50_C4XFY3 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFY3_MYCFE Length = 247 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 19/230 (8%) Query: 53 LSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAV 112 + I+ L LE+ I A E +P L P LF +G + L+ + + Sbjct: 31 KKINQAEIDIVLKELEEKGIKYITALDENFPEILKNFRYSPYVLFYKGNIGLLNKKAVCL 90 Query: 113 VG---SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 G S ++ F E + + + +D + Q I VL Sbjct: 91 TGDIESPIVDINIKKSQNTFLE-----NYPLITNDFKNLDQKFVEIYRQNKKEIIHVLPY 145 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GL+ + + L +S++P + F RN ++S L++ ++V + Sbjct: 146 GLD--YIKETINLDTE------LYISQYPPQTHAKLFRFKERNILVSFLAEFLIVYSSKS 197 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 SG L A +EV+ PG + +G ++LIK GA L+T+ E+ Sbjct: 198 DSGILSLATAFANNNKEVYCYPGLSYD---DGNNYLIKLGANLITQIAEV 244 >UniRef50_D1BQ27 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BQ27_VEIPT Length = 315 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 19/202 (9%) Query: 56 PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT--DYPGALFVEGELHALH--SFQLA 111 + W++ + +P + D P LF +G+L L + +A Sbjct: 52 DLSVAVDDMDWMD----GAVCCFDAEFPVINESVPKGDRPYLLFYKGDLSLLRDLNRNVA 107 Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 V+G + E L G I SGLA+G D + H + G +IA+L + L Sbjct: 108 VIGYTTPNEALIARESKIVEHLVHHGQHIVSGLAKGCDAIGHTVCMDCGGKTIAILPSPL 167 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN-----FPRRNRIISGLSKGVLVVE 226 N I P H +A ++E+GG ++SE+ P + + + R+R+ + +K V+++ Sbjct: 168 NAISPADHRDMAHQIIEKGGLVISEYYNG--PRSRHEAINRYVERDRLQALFAKAVVLIA 225 Query: 227 AAL----RSGSLVTARCALEQG 244 + SGS A G Sbjct: 226 SYEGRDGDSGSRHAMGKAHSYG 247 >UniRef50_A7HKC7 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=2 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKC7_FERNB Length = 374 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 103/299 (34%), Gaps = 27/299 (9%) Query: 1 MVDTEIWLRLMSIS-SLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKS 59 M + + L I +L + + +I + A +++I + + + Q SF ++ Sbjct: 1 MNNEATCV-LSLIRTNLTKEKINKIIN-FASENNI--SISKVLKFDESKFQELFSFSKED 56 Query: 60 IES-------------SLCWLEQPNHHLIPADSEFYPPQLLA---TTDYPGALFVEGELH 103 I+ L + +LI E YP +L + P LF +G Sbjct: 57 IQEVLKAKDNLGNSSFLLEDITSKGIYLITVLDEEYPKKLKENLSIDELPPMLFCKGNTD 116 Query: 104 ALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 L+ +++VGS+ + + + + A G + SG + ID ++ + G + Sbjct: 117 LLNEKHISIVGSKNANEISIEFAKNITKKAAKNGQVVVSGYEKTIDKAIIESTINNGGRA 176 Query: 164 IAVLGNG-LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 I +L G L P + ++S + + +I + Sbjct: 177 IILLSQGILLFQIPNE---YYEYYTDGNILILSIYTPNSKWDNNKTIETEKIKFAFGDEI 233 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 + + + A++ E + P + LI +G V EILE Sbjct: 234 YIADIKHEDEIWNST-VAIKNKTENIFVRQPEDTEDTA-NLELINKGLKAVNIIGEILE 290 >UniRef50_Q98Q22 DNA PROCESSING PROTEIN SMF n=1 Tax=Mycoplasma pulmonis RepID=Q98Q22_MYCPU Length = 244 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 102/279 (36%), Gaps = 36/279 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M + + L I+ I + + + + +++ S Sbjct: 1 MNE--VLLYFSFINK-------------GNTKKIFESLKKHEQIDPVELKKYKSM----- 40 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 LE+ + I S YP + + P LF +G L L + ++A+ G S Sbjct: 41 ------LEENSIKYITILSSKYPEEFKYLNNPPFILFYKGNLDLLKNTKIALSGD-VVSQ 93 Query: 121 YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA 180 F E + + T+ + G D K +Q + I + NGL+ + + Sbjct: 94 KNLDLLDDFVENM--KNETLVTLNFPGFDDEVVKKFIQKDLKVIFLAANGLDNPYFSQKE 151 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 L+S +P +V R+ I++ L+K ++ E S SL Sbjct: 152 FDFEK-----NLLISIYPPEVGVKKERLQSRSEILASLAKYLVFFEFKKNSKSLHLVNFF 206 Query: 241 LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 LE G+ ++ P N G + LIK+GA L+T ++ Sbjct: 207 LEMGKMIYCYPTDNFNEF--GNNDLIKEGAKLITHYSDL 243 >UniRef50_B6WTA5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTA5_9DELT Length = 233 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA 155 ++ G L L+ GSR S G +A G + SG A G+D AH A Sbjct: 29 IYCMGNLKLLNIPGAGFCGSRKVSPAGISVAEDCAVQIAQSGYPVISGYAAGVDMTAHTA 88 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 AL G ++ VL G++ + +A ++S F ++ Y RN +I Sbjct: 89 ALAAGGTTVIVLPEGIDHFRIK--KEIAEFWDWNRILVISPFDPEMRWTVYRAMGRNHVI 146 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTE 275 LS+ ++V+EA + G+L +L+ +F + + + G L+++G + + Sbjct: 147 VALSRAMIVIEAGEKGGTLAAGLASLKAQCPLFVVDYGEND-YAVGNRVLLQKGGRSLKK 205 >UniRef50_B5D330 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D330_9BACE Length = 381 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 105/324 (32%), Gaps = 21/324 (6%) Query: 52 FLSFPRKSIESSLCWLEQPNHHLIPADSE-FYPPQLLATT-DYPGALFVEGELHAL-HSF 108 + + L + + +E YP +L P L G+ L Sbjct: 64 LPADLLEEAGRILARQQAMGIRTVSFLNEMSYPCRLNELDIFRPILLHGMGDWSLLDMQP 123 Query: 109 QLAVVGSRAHSWYGERWGRLFCETLA-----TRGVTITSGLARGIDGVAHKAALQVNGVS 163 ++V GS S R + + + LA D A + L +G Sbjct: 124 LVSVTGSPQASPQDVSIAREWGKKYGSGHDGQESCIVVGRLADACDVAAMEGCLDADGHV 183 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 IA++ G + + L ++++GG ++S P P R+++ L + ++ Sbjct: 184 IAIMEVGFDGV---AMEALCRRIVDEGGLVISTKWFGTPSGRNLCP-CERLMAALCEQMI 239 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILEN- 282 VVE + S+ + A + GRE+ + + + EG ++ V + E I E Sbjct: 240 VVECQQQDESMTVVKEARKLGREIHCMKPIMHDISMEG-IQVLPDKKTTVKKCERIFEWA 298 Query: 283 -LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVT- 340 + + + A + + L V + G V Sbjct: 299 DKPYSIVYKIIAVYLQYERITCSGLIDKLKALHIATDPYG-SVHSLMTDKGNSYGRVFME 357 Query: 341 ----QLLELELAGWIAAVPGGYVR 360 + EL I A+ G + Sbjct: 358 ENGFLVFVPELRERIEAIRGKFRV 381 >UniRef50_Q6KHR8 DNA processing protein smf n=1 Tax=Mycoplasma mobile RepID=Q6KHR8_MYCMO Length = 240 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 87/249 (34%), Gaps = 17/249 (6%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW---LEQPNHHLIPADSEFYPPQLLA 88 I ++ G + + + IE + W LE ++ + YP Sbjct: 3 EIIIYFSIKYQGDYFKIKNALIKMEKIDIEKLIQWNKKLENNKIKVLTKFDQTYPNSFKN 62 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P A+F +G + L+S ++ +VG + + T+ S + Sbjct: 63 IKYSPYAIFYKGNIDLLNSEKIMLVG--DSFEKSYEDIENSLHPIILKK-TLLSLGFKNF 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL-LEQGGALVSEFPLDVPPLAYN 207 D + NG I+ NGL + + + L ++SE+P + Sbjct: 120 DEKIYNLFKNNNGKIISFSANGLIDQY------MFNEIDLNLNNLIISEYPFKINLSKRK 173 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 +RN + S LS +++ + S L G+E+F P + G L+ Sbjct: 174 LFKRNYLSSILSDFLIIYNSEKNSKLFNLINFFLNSGKEIFCFPPKGDD----GNLILLN 229 Query: 268 QGAILVTEP 276 GA VT+ Sbjct: 230 DGANFVTKI 238 >UniRef50_Q1ZJ44 Smf protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZJ44_9GAMM Length = 166 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 3/153 (1%) Query: 10 LMSISSLYGDDMVRIAHWV--AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L S+ L + + + + L+Q Q Q + ++ I+++L W Sbjct: 3 LDSVPRLPKRLLFSLLRRHNIDQLDTLSYSQLRQYKFNDAQIQSLKNPNQQKIQANLDWQ 62 Query: 68 E-QPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWG 126 N ++I D YPP L ++ P L+++G++ L Q+A+VGSR+ + YG++ Sbjct: 63 NVDQNKYIIAFDDPSYPPLLKEISNPPLLLYLQGDITLLLKPQIAIVGSRSCTLYGQQKS 122 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 F + L+ G I+SGLA G+DG AH+ AL Sbjct: 123 YQFAQQLSKAGFVISSGLAMGVDGFAHQGALDA 155 >UniRef50_Q4A5L4 Putative DNA processing protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A5L4_MYCS5 Length = 246 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 87/229 (37%), Gaps = 15/229 (6%) Query: 54 SFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH---SFQL 110 + I+ + + I YP L P L+ +G ++ L+ +L Sbjct: 28 KLRKSEIDEITNIYLKNDIKFISIFDLNYPSSLFMVHYPPFVLYYKGNINLLNDLTKKRL 87 Query: 111 AVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 +V +S Y + TL + +T+ A + N I + G Sbjct: 88 YLVDE-MNSEYSKEILSKNIRTLTENSILVTNSYAS--EKHLIDEFKNANASIIYIAKEG 144 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 L ++ + + ++S++P+D P NF + N + + ++ +++ + Sbjct: 145 L-------NSSKFDDINLENNLIISQYPIDDHPRKINFRQSNVLSAAIANSLVIFSSYKD 197 Query: 231 SGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 S L G+++ PG + +G + LI+ GA L+T+ + + Sbjct: 198 SKVNNLVSEFLNLGKDINCFPGSLDEK--DGNNHLIQSGANLITQIQAV 244 >UniRef50_A4J5U6 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5U6_DESRM Length = 192 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 106 HSFQLAVVGSRAH-----------SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 + +A++G R + A + V + SGLA GID AH Sbjct: 11 NKEIIAIIGPRRPIKGSSASEILQHQRDCDIAYHLAQQAARKDVVVLSGLATGIDTAAHL 70 Query: 155 AALQVNGVSIAVLGNGLNT-IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 L G+++AV+ GL+ I P + L ++ +GG +VS+F P + F R++ Sbjct: 71 GCLDAGGITVAVVPFGLSAPISPAENRSLFHQIVHKGGCIVSQFKPKQPAAKWTFIVRDK 130 Query: 214 IISGLSKGVLVVE-----AALRSGSLVTARCALEQGREVF 248 + LS ++VV + G+ A + G+ +F Sbjct: 131 TQAELSSKIVVVGTFPPNGLIVGGTRHCALWGRKMGKPLF 170 >UniRef50_C7JES2 DNA processing chain A SMF n=8 Tax=Acetobacter pasteurianus RepID=C7JES2_ACEP3 Length = 214 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 46/206 (22%) Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGP 262 LA +FPRRNR+I+GL G +VVEAA SG+L+TAR ++ GRE+FA+PG +P G Sbjct: 1 MLARHFPRRNRLIAGLGLGCVVVEAAPHSGTLITARMVVDYGRELFAVPGSPLDPRCRGS 60 Query: 263 HWLIKQGAILVTEPEEILENLQFGLHWLP------------------------------- 291 + L++ GAIL +IL +L + Sbjct: 61 NNLLRNGAILTESVADILPHLPPVIPQSAGSTVSLPSISAPRQKKSVSPPQTGLPFVSEP 120 Query: 292 -----DAPENSFYSPDQQDVALPF----------PELLANVGDEVTPVDVVAERAGQPVP 336 A + + + F LL+ + VD + R Sbjct: 121 PERAFFASPQNVDEKEPIALKPHFSAASTAQDVRENLLSLLSFTPIAVDDLIRRCQFSAS 180 Query: 337 EVVTQLLELELAGWIAAVPGGYVRLR 362 V+ L ELEL+G ++ GG V L Sbjct: 181 AVLVALTELELSGCVSTYSGGMVGLA 206 >UniRef50_Q6F0T0 DNA processing/uptake protein n=1 Tax=Mesoplasma florum RepID=Q6F0T0_MESFL Length = 259 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 82/256 (32%), Gaps = 7/256 (2%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + + ++ I + YP L P Sbjct: 5 LLYFSLKYHGDWEKIYDALDRKEKIETQDLIKVPNSIPNNFISIINPLYPNNLKQIMKPP 64 Query: 94 GALFVEGELHALHS--FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 L+ G + L + + + S Y + + E L TI D Sbjct: 65 FILYYLGNISLLQNYFQTIFINSSDNIDEYNFKVIKQVVEDLIKENRTILLSCENSQDNK 124 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP----LDVPPLAYN 207 ++ G I V L + ++ ++SE+ Sbjct: 125 LLDFIIEKQGKLIVVTKEPLQSFLNSESWAKHKNIEYYDFIIISEYEESNNFKYKSNNNK 184 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK 267 RII+GLSK ++ +E + L + + FA+P + + S + L+K Sbjct: 185 EEMNIRIINGLSKAIIFLEHSNFKKIEPLFNAVLNENKPYFAIPQNLKDTESS-SNNLLK 243 Query: 268 QGAILVTEPEEILENL 283 GA L+ +IL + Sbjct: 244 NGAKLLESATDILNQI 259 >UniRef50_A8L0W2 SMF family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W2_FRASN Length = 283 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 20/241 (8%) Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFV--EGELHALHSFQLAVVGSR 116 + L LI +P L P AL+ G L L + +AV G+R Sbjct: 49 DPDQLLDAHAALGWRLICPGDHDWPTSLTPAGPAPLALWAHGHGHLAVLAARAVAVTGNR 108 Query: 117 AHSWYGERWGRLFCETLATRG--VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 + + G LAT VT+T+ L+RGI A AA+ ++A+L L T Sbjct: 109 SATPAGLSTAARLAHDLATASPPVTVTATLSRGIARAALTAAVPH-APTLAILVGDLLTD 167 Query: 175 HPRRHARLAASLLEQGGALVSEFP----LDVPPLAYNFPRRN----RIISGLSKGVLVVE 226 H L A++ G +VSE P PP + RRN R+++ L++ LV+E Sbjct: 168 R-APHPELLAAVAAT-GLVVSEIPPLWEPATPPTTRDRGRRNTARARLLATLTQATLVLE 225 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG--AILVTEPEEILENLQ 284 +A + TAR A GR + +P GN + + +G A VT +I +L Sbjct: 226 SAPGGAGIATARAARALGRPLLTIPTLGGNGDAA---RALLRGRLASPVTTAADITAHLP 282 Query: 285 F 285 Sbjct: 283 H 283 >UniRef50_D1J800 DNA processing protein smf n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J800_MYCHP Length = 252 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 83/283 (29%), Gaps = 36/283 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI 60 M E L I++ K I + Q Q ++ F Sbjct: 1 MNKEEYLAYLSYINN-------------GKWHQIYNDLKSQIT---CQKTKYADFCSDQA 44 Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW 120 N I YP + P L+ G L + + G+ + S Sbjct: 45 IK--------NKSYITIFDSDYPLYCNNVWNPPFVLYYYGNKQLLKHKIIMITGNISISN 96 Query: 121 YG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + F + +G+D + N I +L G+ Sbjct: 97 IIEVKDSIENFSKEYVFCNEAW-----KGLDIQLIDYLISKNKNIIIILACGIEYAKNSL 151 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 + +SE+P + RNRI + +S ++++ +S Sbjct: 152 PKKWFDY---SNLLFISEYPSNYHTSKITLKARNRISAAISNYLVLLSC-YKSTMNNLID 207 Query: 239 CALEQGREVFALPGPIGNPGSEG-PHWLIKQGAILVTEPEEIL 280 L G+EV+ L N + LI +GA +T +++ Sbjct: 208 QFLNIGKEVYCLDDTQNNLNEDNFNKNLINEGAGKITSITDLI 250 >UniRef50_A8L0W3 Putative DNA processing smf-family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8L0W3_FRASN Length = 283 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 96/293 (32%), Gaps = 34/293 (11%) Query: 3 DTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFL-SFPRKSIE 61 D L + H + +R +P Sbjct: 8 DRRARAALTCLPPDRHRTQR--IHRHGPIT---------------VWERIAGRYPDIDPG 50 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG--ELHALHSFQLAVVGSRAHS 119 L + L+ +P L P L+V G +L L + + G+ A S Sbjct: 51 RLLEQATESGWRLVIPGDPDWPATL-DVPGRPLGLWVHGAGDLPGLLRRAVTLTGALAGS 109 Query: 120 WYGERWGRLFCETLATR----GVTITS-GLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 YG L T+ VT+ + G G D A AA + L+T Sbjct: 110 AYGRTVAADLATKLTTQPGGESVTVVAHGGGNGTDVAALTAAARRPAA-----VAVLDTP 164 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR-SGS 233 + GG LVS D P + R +++ L+ +++EA + Sbjct: 165 TDLFGQPDLLRTVAAGGLLVSAAAPDANPTPGHVLARIELLAALAHATVLIEARASDDDA 224 Query: 234 LVTARCAL-EQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENLQ 284 L A A + R V A+PGPI S GPH L++ G A VT I +L Sbjct: 225 LSVAYTAHFRRRRPVLAVPGPITALASAGPHALLRDGTARCVTTAGHITAHLP 277 >UniRef50_C3RR84 Rossmann fold nucleotide-binding protein n=3 Tax=Bacteria RepID=C3RR84_9MOLU Length = 332 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 91/268 (33%), Gaps = 17/268 (6%) Query: 44 LTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQL-LATT-DYPGALFVEGE 101 + + A+R + S L LE ++ + +P L P +F G Sbjct: 71 IAYKMARRIETM--NIFLSVLNNLEGNGINVTTKYEDNFPKLLTKHLKKRAPLYVFYCGN 128 Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + L ++++G + + + + + S A+GID VA AL Sbjct: 129 IE-LVGEGISLMGLNKVTKKDRAYTKRLVDKAIEDNLIYISNDAKGIDDVALHYALYHGC 187 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 I+ + L + + ++S + N RN + LSK Sbjct: 188 HCISFVCERLG----AKSKDYTRYIKSGQLVMLSAEDPNCYFDVTNAIERNSYVCALSKY 243 Query: 222 VLVVEAALRSG-SLVTARCALEQGR-EVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 ++V +++ +G + T+ L A+ G G L+ G + +++ Sbjct: 244 QIIVSSSINNGATWFTSLQNLHNKWTTPLAVEG-----LYLGNDRLLDMGVTPIY-IKDV 297 Query: 280 LENLQFGLHWLPDAPENSFYSPDQQDVA 307 L + F + + + + ++ Sbjct: 298 LSDYSFDMIYDRNKKIVEDAEVNIDQMS 325 >UniRef50_UPI000196B148 hypothetical protein CATMIT_00933 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B148 Length = 341 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 16/279 (5%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIE--SSLCWLEQPNHHLIPADSEFYPPQLLAT-TD 91 + Q GL A++ + + +L LE N + E YP L + Sbjct: 63 YDTLTQIIGLDAFTARKIEKRQKLLPDLFYALQNLESQNIGVTTIYEEDYPACLRVLGSK 122 Query: 92 YPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV 151 P + G+L + ++V G + + + + ++ G T+ G ++G++ + Sbjct: 123 MPLVISYIGDLSLSYGVNISVAGPQVMNKTMRHVTKEIMKKVSKEGYTLVVGGSKGVEEL 182 Query: 152 AHKAALQVNGVSIAVLG-NGLNTIHPRRHARLAASLLEQGGALV-SEFPLDVPPLAYNFP 209 A + L NG ++ + + + I RL + L+Q L+ S + Sbjct: 183 ALRTHLTNNGNAVLFVADHMFDKI------RLYSKYLKQNKLLIMSANDPYALFDVTHAL 236 Query: 210 RRNRIISGLSKGVLVVEAALRSG-SLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 +N I G+ +V + SG T+ + + + G LI+ Sbjct: 237 DKNLYICGMVFAQVVTGTHIGSGPVWFTSIQNIHSHWTRQLVYETLD---YSGNIRLIEM 293 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVA 307 G T+ E++ ++ P + Sbjct: 294 GEAHFTD-EDLKSDVTLAEVLDNHETIIKKDDPSIDQMT 331 >UniRef50_B3PM92 Putative DNA processing protein, SMF family n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM92_MYCA5 Length = 258 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 79/258 (30%), Gaps = 32/258 (12%) Query: 25 AHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPP 84 + I + A++ E +I + YP Sbjct: 10 YKYNGDWDKIYHAFKNFENVDDDLAKQIARERIDLKE-----------KIITILDDEYPA 58 Query: 85 QLLATTDYPGALFVEGELHA-LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSG 143 +L P AL G + G+ Y ++LA V + Sbjct: 59 KLDMLRKPPFALHYLGNYSLINFEKSFCLTGNLEK-DYIVDLLCHI-DSLAK-DVLVVLP 115 Query: 144 LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL---LEQGGALVSEFPLD 200 +GI+ + L + + + GL R+ + + ++SE+P Sbjct: 116 SWKGINEKILEKCLTNDQPILVISKCGL------RNEPFLEKIDFAKHKNVLVISEYPNK 169 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL--VTARCALEQGREVFAL-PGPIGNP 257 RI++ L+ ++++ SG L+ G+EVF P P N Sbjct: 170 YHISRKTIFAYRRIVAALANNLVLL---ATSGPFLNNLVNNFLDCGKEVFCFAPEPNDNE 226 Query: 258 GSEGPHWLIKQGAILVTE 275 S LI GA L+ + Sbjct: 227 NS--NLELINLGATLIND 242 >UniRef50_D0MHW3 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHW3_RHOM4 Length = 297 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 82/243 (33%), Gaps = 17/243 (6%) Query: 24 IAHWVAKQSHIDAVVLQQTGLTLRQA------------QRFLSFPRKSIESSLCWLEQPN 71 + V + + + L FL ++ ++ L L Sbjct: 25 LVRHVGSFEALSSQPPEALRNHLGHRPEGIRLLAQLSNAAFLQKMQEQAKAELATLITKR 84 Query: 72 HHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLF 129 ++ + +P L A P LF G L L +A++ S + Sbjct: 85 IRVLTPHDDVWPAGLEALPEHQRPFLLFAYGNLELLAQPTVALLARPPISDAAYDRAQDL 144 Query: 130 CETLATRGVTITSGLARGIDGVAHKAALQVNG--VSIAVLGNGLNTIHPRRHARLAASLL 187 L G +G G D K +I V GL+ + P +AA+ L Sbjct: 145 TLHLIEAGCVPVTGALSGFDVALQKLCHNAPRPHPAIMVAHTGLSQLLPPM-RPVAAATL 203 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 GG L+S F +++ P +R + + L++ + VE + + A++ R V Sbjct: 204 RAGGLLLSPFLMELRPSDRRDRQRALVQAALAQAAVFVEPRDETPEHMALDWAVQAHRPV 263 Query: 248 FAL 250 F + Sbjct: 264 FGI 266 >UniRef50_D1AX88 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX88_STRM9 Length = 269 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 95/278 (34%), Gaps = 23/278 (8%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCW 66 W+ L I L D V I H + L + L ++ + Sbjct: 3 WINLSRI--LKEDICVEIMKRYDNIFHAIDDFKKYD-LNKTILYKLLKAAKEDDIYYINK 59 Query: 67 LEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSR----AHSWYG 122 + N +I + YP +L+ + ++++ + + S ++ Sbjct: 60 CREENIKIISFKDKNYPKKLIQSGFIFPYIYLKTNIDINKLENILAFSSNYDLIENTKKI 119 Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + ++ +T A D K I + N + + ++ L Sbjct: 120 LDNTLDLNDNISLS--LVTETDA---DKYIQKKFSSKKNNMIYI--NSRDFKYIPKYYDL 172 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + L+S P + N + +++G+S + + E+ L S +++ ++ Sbjct: 173 DKDV------LISMSPFEDFRSKNNILKSTCLLAGISDYLYIPESFLTSRAMILSKIMNS 226 Query: 243 QGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEI 279 G+E+FA G +++++ A LV ++I Sbjct: 227 MGKEIFA--STSYGNRYLGCNYILRNNIAKLVMSKDDI 262 >UniRef50_Q14PF7 Hypothetical dna processing protein smf n-terminal truncated n=1 Tax=Spiroplasma citri RepID=Q14PF7_SPICI Length = 189 Score = 97.3 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 76/203 (37%), Gaps = 23/203 (11%) Query: 88 ATTDYPGALFVEGELHAL--HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 P LF G L L +LA+ G+ + G ++ + + + +T+ Sbjct: 3 NIYRPPFVLFYVGNLAVLNDQRHKLAICGTTVPNKRGLVTAKMLTKKILKQKITLIVTSE 62 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGG-----ALVSEFPLD 200 G++ K NG SI +L ++ + +Q ++SE + Sbjct: 63 AGVNECVVKNL--GNGSSILIL----------KNLNDYKQITKQYPNTKFQIIISEAYQN 110 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSE 260 + I+SGL GV++V++ L + A G+EVF P I Sbjct: 111 SVNKSQYELY--LIMSGLMDGVVIVQSTLDDETHRIVTLAKHDGKEVFCFPAQITVANK- 167 Query: 261 GPHWLIKQGAILVTEPEEILENL 283 + IK GA LV ++I L Sbjct: 168 -NNGFIKNGAQLVENVDDICGKL 189 >UniRef50_B9XI03 DNA protecting protein DprA n=1 Tax=bacterium Ellin514 RepID=B9XI03_9BACT Length = 105 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 5/101 (4%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M E + L I + + ++ I + QQ G+ A+ ++ Sbjct: 1 MDSREALVALNMIDHVGPVRVRQLLEQFGNAPAILSASKQQLMRVRGIGEETAECIANWE 60 Query: 57 RK-SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGAL 96 + + L + H++ + YP L D P Sbjct: 61 KSIDLAGELKRITDYGCHVLTQADDEYPELLRQIYDPPFVF 101 >UniRef50_A5UTB7 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTB7_ROSS1 Length = 215 Score = 91.1 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 54/188 (28%), Gaps = 5/188 (2%) Query: 71 NHHLIPADSEFYPPQLLAT--TDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRL 128 N + YP L P +F+ G L L + S Sbjct: 2 NIERLHIRDTAYPVALRERLGKRAPEHVFLLGNPELLQYDPLGLFCSTKCPGNIILKTYD 61 Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLE 188 L V + G ++ L+ I GL + P + + Sbjct: 62 LARALRDARVPVIGGFHTPMEKECLAVLLRGPQPVIVCPARGLEGVRPV--TEVRDGIRA 119 Query: 189 QGGALVSEFPLDV-PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 LVS F A +RNR ++ L+ V AA + R + G+ + Sbjct: 120 GRVLLVSIFAPKQRRATADLADQRNRFVAALASRSFVSHAAPGGKTEALCREMIAMGKTL 179 Query: 248 FALPGPIG 255 F + P Sbjct: 180 FTVDAPEN 187 >UniRef50_Q8TVJ9 Predicted Rossmann fold nucleotide-binding protein n=6 Tax=cellular organisms RepID=Q8TVJ9_METKA Length = 157 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 23/175 (13%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q++V+GS S +A RG + G G+ A + A + G+++ +L Sbjct: 2 QISVIGSGRASEDVLNLAEELGREIARRGHVLVCGGRGGVMEAACRGAREEGGITVGILP 61 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 E + P + RN ++ V+ V Sbjct: 62 G--------------ERRDEANPYVDVVIPTGLGE------ARNALVVRAGDAVIAVAGG 101 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G+L A + G+ V L G E +GA E E E L Sbjct: 102 W--GTLSEISLAKKMGKPVVGL-TSSGGWAEELARRGEIEGAESPEEAVEKAELL 153 >UniRef50_Q3A2Y3 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Y3_PELCD Length = 154 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 35/178 (19%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + V+G+ + + G GR +A + G GI A + A + G ++ Sbjct: 1 MRQPIIGVIGAASVAAAGYETGRQVGRLIAEANAVLVCGGLGGIMEAACRGACEAGGQTL 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN-FPRRNRIISGLSKGVL 223 +L ++ P PL N RN II+ ++ ++ Sbjct: 61 GLLPGP-------------DAVAAN--------PWVTLPLPTNLGHARNVIIAHTAQALI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 VE G+L L+ G+ V AL P G I T P E +E Sbjct: 100 AVEGEY--GTLSEMAIGLKLGKPVVALDSWPDLP-----------GVIYATNPAEAVE 144 >UniRef50_B2V9S6 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V9S6_SULSY Length = 225 Score = 88.4 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 38/210 (18%) Query: 97 FVEG-ELHALHSFQLAVVGSRAHSW--YGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 F++G E+ + + + GS R L+ +G +I +G GI A+ Sbjct: 24 FIDGFEVMPNYLPSVTIFGSARVEEGNKYYEAARELAFKLSKKGFSIVTGGGPGIMEAAN 83 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHA--RLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 + A + +G SI GLN P+ + +L F R Sbjct: 84 RGAFEADGNSI-----GLNIKLPKEQKPNKYLTEILNFN----------------YFFAR 122 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIG-NPGSEGPHWLI---- 266 ++ + ++ + +T L Q +++ P + N G + Sbjct: 123 KVMLVKYATAFVLFPGGFGTLDEITETLTLIQTKKLKPFPVILYGNEYWNGFVQWLNDVV 182 Query: 267 -------KQGAILVTEPEEILENLQFGLHW 289 K+ L + ++I E + + W Sbjct: 183 VKDGYIDKEDTELFKQMDDIDEIVDYIDQW 212 >UniRef50_Q0A4N6 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q0A4N6_ALHEH Length = 241 Score = 88.4 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 63/231 (27%), Gaps = 33/231 (14%) Query: 97 FVEGELHALH-SFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG ++V GS + L+ G ++ SG GI A+ Sbjct: 34 FVEGFERLSQIKPSVSVFGSARTAPDHPYYKLAEDLSRALSDAGFSVVSGGGPGIMEAAN 93 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 K A SI GLN P + + +F R Sbjct: 94 KGAHGGKSPSI-----GLNIQLPHEQSGNPYQDISLN---------------FRHFFSRK 133 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQG 269 + + +V+ G+L L G+ + P +G + Sbjct: 134 VMFVKYASAYVVLPGGF--GTLDELAEILTLVQTGKTRRIPIILVYKPYWQGLVDWFRDT 191 Query: 270 --AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 A E++ L L + + F + + E + Sbjct: 192 LVAEGAINAEDMD--LFQVLDEPTEVVDAIFAHYEDRGFEPSRREREMLLD 240 >UniRef50_C0QTX6 Putative uncharacterized protein n=4 Tax=Aquificales RepID=C0QTX6_PERMH Length = 146 Score = 88.0 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 40/181 (22%) Query: 108 FQLAVVG----SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 Q+ V+G +R Y + + LA G + G G+ K A + G + Sbjct: 2 KQVTVIGGSQVNRNSDEYI--FAYKLGKLLAENGCIVVCGGRTGVMEAVCKGAKESGGTT 59 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + ++ + + A + G + +N RN I+ V+ Sbjct: 60 VGIMPS-----YEGYEANPYVDIKINTG------------MNWN---RNPIVVASGDPVI 99 Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V G+L A G+ V G +G I V +PE++LE L Sbjct: 100 AVGGNY--GTLSEIAYAFILGKRVL------------GYKTHKIEGIITVNKPEDVLEFL 145 Query: 284 Q 284 + Sbjct: 146 R 146 >UniRef50_O29139 P450 cytochrome, putative n=4 Tax=Euryarchaeota RepID=O29139_ARCFU Length = 151 Score = 87.3 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 34/179 (18%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + Q+ V+G+ R E +A +G + +G G+ + K A G+ + Sbjct: 1 MKLMQIGVIGAGECDEETYRIAYRVGELIAEKGHVLINGGLGGVMEASAKGAKSKGGLVV 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 A+L R L + + RN II S ++ Sbjct: 61 AILP---------RKKDLCNDFAD------------IRIATDMGHARNVIIVHSSDALIS 99 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 V G++ AL++G+ V +L P+ + +G + PEE + Sbjct: 100 VGGGY--GTISEIAIALKEGKRVASLKPPV-----------VIEGMRVFETPEEAVNYC 145 >UniRef50_C1DTZ1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C1DTZ1_SULAA Length = 223 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 27/177 (15%) Query: 97 FVEG-ELHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 F++G E+ + + + GS R LA +G TI +G GI A+ Sbjct: 24 FIDGFEVMPDYQPSVTIFGSARVKEGDKYYDSARQLGFKLAKKGFTIVTGGGPGIMEAAN 83 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + A + G SI GLN P+ + + F R Sbjct: 84 RGAFEAGGNSI-----GLNIKLPKEQKP-------------NPYLTLTL-NFNYFFARKV 124 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIG-NPGSEGPHWLIK 267 ++ + G ++ G+L L Q +++ P + +G +K Sbjct: 125 MLVKYATGFVLFPGGY--GTLDEVFETLTLIQTKKLKPFPVIFFGSDYWDGLLQWLK 179 >UniRef50_D2L1M7 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M7_9DELT Length = 161 Score = 85.0 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +++V+G+ RL LA G I G G+ + A + G +I +L Sbjct: 7 RRVSVIGAGTCDAAVYEAARLLGRLLAGHGCDIVCGGLGGVMAGVCQGAREAGGRTIGIL 66 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 + +VP + RN ++ V+ + Sbjct: 67 PG--------------DDPAAANPFV------NVPIVTGMGIARNVLVVKNGDAVVALSG 106 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 G+L AL+ GR V AL Sbjct: 107 GA--GTLSEIGLALKLGRPVVAL 127 >UniRef50_Q6KYW1 Putative uncharacterized protein n=4 Tax=Thermoplasmatales RepID=Q6KYW1_PICTO Length = 167 Score = 85.0 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 30/178 (16%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 +H+ + ++G Y E LA + + + G GI K NG+ I Sbjct: 1 MHAINIGIIGGSHTDDYYCSIAYKVGELLAKKNIVVICGGKEGIMECVSKGVSDNNGIVI 60 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L E L P + RN +I S ++ Sbjct: 61 GILPG--------------NDKTEGNRYLTIAMPTGIGY------MRNFLIVRASDALIA 100 Query: 225 VEAALRSGSLVTARCALEQGREVFAL-PGPIGNPGSEGPHWLIKQGAILVTEPEEILE 281 +E SG+ A A+ +G+ V ++ I ++G LI+ ++PEE +E Sbjct: 101 IEGF--SGTTSEAAFAISEGKTVVSIGDLDIKRKETDG--KLIR-----ASDPEEAVE 149 >UniRef50_Q1MRH8 Predicted Rossmann fold nucleotide-binding protein n=5 Tax=Desulfovibrionaceae RepID=Q1MRH8_LAWIP Length = 233 Score = 84.2 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 28/218 (12%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + + L + G I +G G+ A+KAA + G SI Sbjct: 37 PCVSIFGSARAKPDNPLYKETEAISKLLVSAGFGIITGGGPGLMEAANKAAFEAGGRSI- 95 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GL+ P + +E+ F R + ++ +V+ Sbjct: 96 ----GLHIHLPHEEG------CNNYLTIRTEY--------RYFFIRKLMFVKYAQAYVVM 137 Query: 226 EAALRSGSLVTARCA--LEQGREVFALPGPIGNPG-SEGPHWLIKQGA--ILVTEPEEIL 280 + G++ A L Q + + P + N G ++Q EP EI Sbjct: 138 PGGM--GTIDEFSEAFVLTQTKRIHPFPIILYNSQFWNGLVDWMRQTMSKEGFIEPSEID 195 Query: 281 ENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG 318 L P + L + Sbjct: 196 ALLNICDTPEEVLKIIQEKVPTAITHKKNKHKQLHSYP 233 >UniRef50_Q3IU16 Putative uncharacterized protein n=7 Tax=root RepID=Q3IU16_NATPD Length = 153 Score = 83.8 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 53/177 (29%), Gaps = 34/177 (19%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV--SIAV 166 +++V+G + +TLA G T+ G G+ + A +I + Sbjct: 2 RVSVIGGSSVGDESAAIAESVGQTLAEHGHTVVCGGLGGVMEAVCRGAHNAEPPAETIGI 61 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L + P RN ++ V+ V+ Sbjct: 62 LPG-------------RDRTAAND-------WVTTPIATGLGNARNVVVVRNGDAVIAVD 101 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 A G+L AL+ GR V L H + G V P E +E + Sbjct: 102 GAA--GTLSELGHALDLGRPVAGLR----------THDIELDGFQPVETPTEAVEYV 146 >UniRef50_C8SBE4 P450 cytochrome, putative n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SBE4_FERPL Length = 149 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 22/152 (14%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 Q+ V+GS E LA R I +G G+ + A + G + Sbjct: 1 MPLQVGVIGSGDCYEDVCEIAERVGELLAERKCVIINGGLFGVMEAVSRGAKRKGGFVVG 60 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 ++ + A ++ RN II S ++ + Sbjct: 61 IVPG-----KSKEEANKYCDIV---------------IATNMGHARNMIIVHSSDVLIAI 100 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNP 257 G++ AL++G+ V + P+ P Sbjct: 101 GGGY--GTISEMAIALKEGKRVVGIKTPVKLP 130 >UniRef50_D0MG69 Putative uncharacterized protein n=20 Tax=Bacteria RepID=D0MG69_RHOM4 Length = 247 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 31/204 (15%) Query: 87 LATTDYPGAL--FVEGELHALH-SFQLAVVGSRAHSWYG---ERWGRLFCETLATRGVTI 140 + FVEG +++ GS + G R L G + Sbjct: 35 KDLWRIFRIMSEFVEGFETLSRIGPCVSIFGSAR-TPRGHRYYRMAEAVGRCLVEHGFGV 93 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 +G GI A+K A + GVS+ GLN + P +++ + Sbjct: 94 ITGGGPGIMEAANKGAKEAGGVSV-----GLNIVIPHEQES--NPYIDRDKLI------- 139 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNP 257 F R + ++G +V+ G++ AL G+ +G Sbjct: 140 ---NFDFFFVRKVMFVKYAQGFIVLPGGF--GTMDELFEALTLIQTGKASRFPVILMGTD 194 Query: 258 GSEGPHWLIKQG--AILVTEPEEI 279 G ++ A PE++ Sbjct: 195 YWSGLLDWLRNEMLAAGNISPEDL 218 >UniRef50_Q2FNM3 Putative uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNM3_METHJ Length = 152 Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 37/181 (20%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G+ Q+AV+G LA +G+ + SG G+ + + A Sbjct: 2 GDGTRNTGKQVAVIGGSHAGEQDLIHAERVGVLLAHKGIVLLSGGRGGVMEASCRGASNA 61 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G+ + ++ + L RN I+ G + Sbjct: 62 GGMVVGIVPGSEGNSY-----------------------LSAIVKTRMDHARNVILVGSA 98 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 V+ + G+L AL+ G V+ G G I P+E Sbjct: 99 DAVIAIGGEY--GTLSEIAFALKSGIPVY------------GISTWDIPGVIPCENPDEA 144 Query: 280 L 280 + Sbjct: 145 V 145 >UniRef50_C2FUF1 Rossmann fold nucleotide-binding protein n=8 Tax=Bacteria RepID=C2FUF1_9SPHI Length = 233 Score = 81.1 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 38/195 (19%) Query: 108 FQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS R + + + L RG + SG GI A+K A + G S+ Sbjct: 45 PCVSIFGSARTPREHKYYQMAVDIGKLLTERGYGVISGGGPGIMEAANKGAYEAGGKSV- 103 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P +++ L EF F R + S+G +V+ Sbjct: 104 ----GLNIELPFEQFH--NKYIDRDKLL--EF--------NYFFVRKVMFMKYSQGYIVM 147 Query: 226 EAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQGA------------ 270 G++ A+ G+ +G+ G ++ Sbjct: 148 PGGF--GTMDELFEAITLIQTGKIARFPIVLVGSEYWGGLIDWVQNTMLGNAYISEEDLK 205 Query: 271 --ILVTEPEEILENL 283 +V E+ E++ Sbjct: 206 LYRVVDSAEDAAEHI 220 >UniRef50_Q6A9G1 Conserved protein, putative DNA processing Smf-family protein n=1 Tax=Propionibacterium acnes RepID=Q6A9G1_PROAC Length = 165 Score = 80.3 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 47/156 (30%), Gaps = 12/156 (7%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHI---DAVVLQQTGLTLRQAQRFLSF--- 55 + + L ++ + + + D GL+ Q + Sbjct: 10 DERRARVVLALLAEPDDPVTGGLMRRLGAVETLGLLDTDTTTVPGLSRVDGQVWRDHLTS 69 Query: 56 --PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTD-YPGALFVEGELHALHSFQ--- 109 + L +E+ + +P L D P LFV G L Sbjct: 70 PGRLDGLAQRLRMVEESGIATLIPGDAHWPQALDDLGDRAPFILFVRGAASFLARPWNDL 129 Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLA 145 + V GSRA S YGE LA R + +G A Sbjct: 130 VTVTGSRAASAYGEHVAAELAGDLANRERVLVAGDA 165 >UniRef50_B9XIX5 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XIX5_9BACT Length = 227 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 30/167 (17%) Query: 108 FQLAVVGS-RAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + + GS R + Y + LA + + +G GI A++ A + +G SI Sbjct: 36 PGVTIFGSARTPARNPY-YQATVTLARGLAKHNLAVITGGGPGIMAAANRGASRAHGKSI 94 Query: 165 AVLGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 GLN P L ++ P + F R S G + Sbjct: 95 -----GLNIELPLEQKGNLYTNI---------------PINFHYFFARKVCFVKYSLGFV 134 Query: 224 VVEAALRSGSLVTARCALE--QGREVFALPGPIGNP-GSEGPHWLIK 267 + G+L L Q R + P + G ++ Sbjct: 135 FMPGGF--GTLDEFFEVLTLVQTRRIPRFPLILFGKTYWTGLIKWMR 179 >UniRef50_Q92IH0 DNA processing protein Smf-like protein n=3 Tax=spotted fever group RepID=Q92IH0_RICCN Length = 111 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 45/62 (72%) Query: 224 VVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 VVEA+L+SGSL+TA+ ALEQ R +FA+PG +P +G + LI++GA LV ++I+ NL Sbjct: 2 VVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANL 61 Query: 284 QF 285 Sbjct: 62 PQ 63 >UniRef50_UPI00003826D2 COG1611: Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003826D2 Length = 207 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 40/182 (21%) Query: 65 CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALH-SFQLAVVGSRA--HSWY 121 W+ ++ SE FVEG ++V GS Sbjct: 53 DWVHSDPWRVMRIQSE----------------FVEGFGALAEVGPAVSVFGSARTKPDHA 96 Query: 122 GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 L G + +G GI A+K A + G+SI GL P Sbjct: 97 DYALAEDVGRLLVDEGFAVITGGGPGIMEAANKGASEAGGLSI-----GLGIELPFEQG- 150 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 + ++ F R + ++G +V+ G+ AL Sbjct: 151 -MNRYV------------NLGVNFRYFFARKTMFVKYAQGFVVLPGGF--GTFDELFEAL 195 Query: 242 EQ 243 Sbjct: 196 TL 197 >UniRef50_C4LHU2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4LHU2_CORK4 Length = 322 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 57/290 (19%) Query: 48 QAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL-H 106 A+ ++ WL ++ SE FVEG Sbjct: 39 HARSTTDQRLLDVQKDADWLHTDPWRVLRIQSE----------------FVEGFGALAEI 82 Query: 107 SFQLAVVGSRAH---SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + V GS S Y ++ L G + +G G+ A++ + G+S Sbjct: 83 PRAVTVFGSARAEVDSPYYKKGVE-VGRALHEAGYGVITGGGPGLMEAANRGCAEAGGLS 141 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I GL P L A +++ F R + S+ + Sbjct: 142 I-----GLGIELPHE-QNLNA-------------WVNLGLNFRYFFVRKTMFLKYSQAFV 182 Query: 224 VVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQGAI--------- 271 + G++ AL G+ IG G I+ I Sbjct: 183 CLPGGF--GTMDELFEALVLVQTGKVTRYPIVLIGTEFWSGLVEWIRDRLISEKMVSPDD 240 Query: 272 --LVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPE-LLANVG 318 L +++ E + + E ++ ++ +L +VG Sbjct: 241 PDLFLVTDDVEEAVGYITTKHEGFVEELGRRLEENSLSHSQRAGILRSVG 290 >UniRef50_A5FRM6 Rossmann fold nucleotide-binding protein-like protein n=5 Tax=Dehalococcoides RepID=A5FRM6_DEHSB Length = 162 Score = 78.4 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AV+G+ + R + LA R VT+ G G+ A + A G++I +L Sbjct: 11 VAVIGASKANSEEARLAEEVGKELALRQVTLVCGGMGGVMEAACRGASLNGGLTIGILPG 70 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 R A + +VS RN ++ ++ V+ + A Sbjct: 71 N-----SREEANPYVQIP-----IVSSI----------GFARNIMVVKSAQAVIAIGGAY 110 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ V AL Sbjct: 111 --GTLSEIAYALQIELPVIAL 129 >UniRef50_Q1K0X3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0X3_DESAC Length = 175 Score = 78.4 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 24/157 (15%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 S +AV+G + + R TLA GV + G G+ + + G Sbjct: 5 PQQTTSPLVAVIGGGTVTAEQYQLARQVGYTLAQAGVDVVCGGLGGVMEAVSRGCREGGG 64 Query: 162 VSIAVL-GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 I +L GN + +P L P + RN +++ + Sbjct: 65 HVIGLLPGNDADDANPWVSYPL---------------PTGLG------HARNMLVAQSAP 103 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNP 257 V+ + G+L AL+ GR V L G P Sbjct: 104 VVIAIAGEY--GTLSELAIALKTGRVVVTLEGWQDIP 138 >UniRef50_A6EE78 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6EE78_9SPHI Length = 244 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 69/243 (28%), Gaps = 50/243 (20%) Query: 84 PQLLATTDYPGAL--FVEGELHALH-SFQLAVVGSRAH--SWYGERWGRLFCETLATRGV 138 + G + FV+G + V GS R + LA G Sbjct: 18 ARWKEMKYVFGVVMQFVKGFRTLHFIGPCVTVFGSARFKEDHPYYELAREISKELAQHGF 77 Query: 139 TITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP 198 I +G GI A++ A + G+SI G N + P E P Sbjct: 78 AIMTGGGPGIMEAANRGAKEGGGLSI-----GCNIVLPFEQH---------------ENP 117 Query: 199 -LDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC--ALEQGREVFALPGPIG 255 LD F R ++ S +V+ G+L L Q ++V P + Sbjct: 118 YLDKFVNIEYFFVRKELLRKYSFAFVVLPGGF--GTLDEFFETVTLVQTKKVERFPIVVV 175 Query: 256 NPGSEGPHWLIKQGAILVT-----------------EPEEILENLQFGLHWLPDAPENSF 298 H I + ++ EE++E++ Sbjct: 176 GKEF---HHAIIEHIRVMAENQTISSVDLDLILFTDSVEEVVEHINKYAAEKNLPKLKEP 232 Query: 299 YSP 301 P Sbjct: 233 AKP 235 >UniRef50_A8FW12 Lysine decarboxylase family n=5 Tax=Proteobacteria RepID=A8FW12_SHESH Length = 249 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 52/179 (29%), Gaps = 30/179 (16%) Query: 109 QLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 +++ GS + LA G +G GI +K A + S+ Sbjct: 55 AISIFGSARVTPDNIYYEKAEQLARRLAQEGFATITGGGPGIMEAGNKGANENQAKSV-- 112 Query: 167 LGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + ++ F R + S G + + Sbjct: 113 ---GLNIDLPMEQSPNPYQNISLN---------------YRYFFARKVMFVKHSMGYVCM 154 Query: 226 EAALRSGSLVTARCALE--QGREVFALPGPIGNPG-SEGPHWLIKQG--AILVTEPEEI 279 G+ AL Q +++ +P + +G + + PE++ Sbjct: 155 PGGF--GTFDEFFEALTLLQTNKIYPIPIVLYGTDFWQGLLDWMAAQPLKHGLISPEDL 211 >UniRef50_C4XEG1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEG1_MYCFE Length = 177 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 34/179 (18%) Query: 32 SHIDAVVLQQTGLTLRQAQRFLSF---PRKSIESSLCWLEQPNHHLIPADSEFYPPQLLA 88 I + + G + + ++ + I+ L L+Q I A + +P L Sbjct: 16 ELIIYLSWKYEGNIWKIYEFLKTYKTVAQAKIDEVLNELKQKGIKYITAFDDNFPEILKN 75 Query: 89 TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGI 148 P LF +G + L + + + + + TS ++G Sbjct: 76 YRYSPYVLFYKGNIKILKLLE---------TQNKNEVFIEW--DFENKKILFTSLNSKG- 123 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 I +L G N L + + +++FP P N Sbjct: 124 -----------KSKIIYILDCGFNH--------LNKKINYKKELYITQFPFQTLPSKIN 163 >UniRef50_B9L2B0 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B0_THERP Length = 169 Score = 77.3 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 63/186 (33%), Gaps = 29/186 (15%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +AV G + + E LA G+T+ G G+ + A + G +I +L Sbjct: 5 RHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQTIGIL 64 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 P A ++ P RN ++ + V+ V Sbjct: 65 --------PGTDPSDANEWVDH------------PICTGLGEARNVVVVASGRVVIAVGG 104 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL--VTEPEEILENLQF 285 L G+L AL+ GR V AL + L + GA + V PEE + + Sbjct: 105 GL--GTLSEIALALKLGRPVIALRSWPLDAS-----LLSRAGATISEVATPEEAVNQVLA 157 Query: 286 GLHWLP 291 L P Sbjct: 158 VLSVQP 163 >UniRef50_C0GHM8 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM8_9FIRM Length = 161 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 31/188 (16%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V+G+ +A G + G G+ A K A G++I Sbjct: 3 QQKYVGVIGAAECGVDVVALAEEVGNVVAKSGSVLVCGGRSGVMEAAAKGARDAGGIAIG 62 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +L G + PR RN II+ ++ V Sbjct: 63 ILP-GDD---PRSGNSYIN----------------FGIATGMGDARNVIIARTCDVLVAV 102 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL--VTEPEEILENL 283 + G+L A++ G+ V L Q A L + ++ E L Sbjct: 103 TGSY--GTLSEIGLAMKMGKPVIGLKTWS-------CIDYCGQPAALHAAEDVADVEEIL 153 Query: 284 QFGLHWLP 291 L+ Sbjct: 154 NKLLNNNE 161 >UniRef50_B5ICC1 Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICC1_9EURY Length = 155 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 23/145 (15%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V+G + E +A + SG G+ A K A G++I Sbjct: 1 MFPIIGVIGGSTCEEEICKIAYRVGELIAKNKCILASGGLGGVMLHASKGAKDAGGLTIG 60 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +L G ++ A + Y RN ++ + ++ + Sbjct: 61 ILPYG------KKEANPYIDIA---------------IPTYYGLARNHLLVRSADVLIAI 99 Query: 226 EAALRSGSLVTARCALEQGREVFAL 250 + + G+L AL +G+ V AL Sbjct: 100 DGFV--GTLSEISFALNEGKTVIAL 122 >UniRef50_C0E9L0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9L0_9CLOT Length = 112 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 49/143 (34%), Gaps = 35/143 (24%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 ++AVVGSR G+ + L I SG A+G+D Sbjct: 2 RVAVVGSRQC---GDLDFFKIKQNLPEDCTEIVSGGAQGVDT------------------ 40 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR-RNRIISGLSKGVLVVEA 227 LA E+ G +EF D P RNR+I S VL Sbjct: 41 -------------LAKKCAEEYGYRYTEFLPDYATHGRTAPLVRNRLIVDHSDFVLAFWD 87 Query: 228 ALRSGSLVTARCALEQGREVFAL 250 +G+ T ALEQ + V + Sbjct: 88 YKSNGTRSTLAYALEQDKPVKII 110 >UniRef50_Q9RX44 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX44_DEIRA Length = 256 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 67/224 (29%), Gaps = 40/224 (17%) Query: 101 ELHALHSFQLAVVGS-RAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ 158 + L + V GS R + + L G + +G GI A++ A + Sbjct: 47 RMAHLSVPLVTVYGSARTALTDRYYGLAQTLGRELVGAGFGVVTGGGPGIMQAANQGAYE 106 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL 218 GVS+ GLN + P L EF F R +++ Sbjct: 107 AGGVSV-----GLNIVLPHEQRHNPYQTLSL------EF--------EYFHARKVMLARY 147 Query: 219 SKGVLVVEAALRSGSLVTARCALE--QGREVFALP-GPIGNPGSEGPHWLIK-----QGA 270 + + G+L L Q R++ +P +G G + GA Sbjct: 148 AHAFVAFPGGF--GTLDEMMEILTLVQTRKMRPVPIYFVGEAHWRGLVEWFRTSLVENGA 205 Query: 271 ---------ILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQD 305 LV + +I +++ + D + Sbjct: 206 IAADDLKLFKLVDDVSQIPADVRAYHDPGAGDGFKRPTAEDTEK 249 >UniRef50_D2QZI7 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZI7_9PLAN Length = 381 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 66/246 (26%), Gaps = 52/246 (21%) Query: 30 KQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQP------------NHHLIPA 77 + + + R +E + ++Q + ++ Sbjct: 29 TSDDLFRTTSSELVDPEPTREPLSRRRRWQVEDLVDQIKQTADKLAADGRELGDLKILSR 88 Query: 78 DSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLAT 135 L + V GS + F + +A Sbjct: 89 T-------LRELRYALKVFG-----PYRSRRKATVFGSARTKPDEPAYQQAVAFGKAIAA 136 Query: 136 RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 + +G A GI H A + N + GL + P + A +++ LV Sbjct: 137 SDWMVVTGAAFGIMEAGHVGAGRENSM-------GLGIMLPFEQS--ANPIIDGDEKLV- 186 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ----GREVFALP 251 + F R ++ V+ + G+L A + R++ +P Sbjct: 187 --------MMKYFFTRKLMLVKECDAVVCLPGGF--GTLDEAMEVITLLQTGKRDI--VP 234 Query: 252 GPIGNP 257 + +P Sbjct: 235 VVLLDP 240 >UniRef50_Q123Q1 Lysine decarboxylase family protein n=34 Tax=Burkholderiales RepID=Q123Q1_POLSJ Length = 168 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 38/174 (21%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 G+R L G+ + SG G+ A + A + GV+I +L Sbjct: 28 GTREC-----EAAYRIASLLGRAGMAVVSGGRGGVMEAASRGAFEAGGVTIGILPEEDTR 82 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + L+ ++ G RN +I+ S ++ + + G+ Sbjct: 83 C---ANRYLSVAIPTGIG-----------------EMRNALIARSSICLVAIGGGM--GT 120 Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL 287 + L+ + VF+L I P G + +++LE + L Sbjct: 121 ISEMALGLKWEKTVFSLYEDIQLP-----------GVQTARDIDQLLEWVAAWL 163 >UniRef50_B9P9D8 Predicted protein n=110 Tax=cellular organisms RepID=B9P9D8_POPTR Length = 315 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 56/218 (25%), Gaps = 48/218 (22%) Query: 107 SFQLAVVGS---RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 +++ GS R S Y + + G + SG GI A+K A S Sbjct: 119 RPAVSIYGSARLREDSPY-YQKTIEIARLFSDAGFAVISGGGPGIMEAANKGAHAGKSAS 177 Query: 164 IAVLGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 + GLN P + +F R S Sbjct: 178 V-----GLNIELPHEQQGNPYQDIA---------------MRFRHFFTRKVTFVKNSDAF 217 Query: 223 LVVEAALRSGSLVTARCALEQ-----GREVFALPGPIGNPGSEGPHWLIK---------- 267 +V+ G+L L R V + G+ +G + Sbjct: 218 IVMPGGF--GTLDELAEVLTLVQTGKSRSVPVV--MYGSRFWKGLLDWFRFTLLPMGLIA 273 Query: 268 ----QGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 +V EP+E+LE + Sbjct: 274 EHDLDLMKIVDEPQEVLEAVYEYYEKRGGEHPIPPKEE 311 >UniRef50_D1N6Y2 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6Y2_9BACT Length = 237 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 64/197 (32%), Gaps = 26/197 (13%) Query: 102 LHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + + +AV GS + R L G + +G GI G A++ A + Sbjct: 41 MSRMPDNLVAVFGSARTPEDSPDYQAARQTGAMLVKAGYGVITGGGPGIMGAANRGAKEA 100 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G +I GLN P +E+ D Y F R + Sbjct: 101 GGRAI-----GLNIELPMEQHP-------------NEYQTDSLSFRYFFI-RKVCFLKYA 141 Query: 220 KGVLVVEAALRSGSLVTARCALE--QGREVFALPGP-IGNPGSEGPHWLIKQGAILVTEP 276 GV+V G+L L Q R++ +P +G G IK+ + Sbjct: 142 SGVIVFPGGF--GTLDELAEVLTMIQTRKINPIPVILVGKKFWNGFLHWIKETLVSAGMI 199 Query: 277 EEILENLQFGLHWLPDA 293 E + L + DA Sbjct: 200 SEFDQGLYHLVDSAEDA 216 >UniRef50_B4SEQ5 Putative uncharacterized protein n=10 Tax=Chlorobiaceae RepID=B4SEQ5_PELPB Length = 245 Score = 74.9 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 27/179 (15%) Query: 97 FVEG-ELHALHSFQLAVVGSRAHSWYGER--WGRLFCETLATRGVTITSGLARGIDGVAH 153 FV G E+ + + +AV GS LA G ++ +G G+ A+ Sbjct: 45 FVSGFEMMSDAAPAVAVFGSTRVPAESAEYLLAERLGSLLAAEGFSVITGGGPGVMAAAN 104 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 K A GVSI G N P + ++ + F R Sbjct: 105 KGAQGAGGVSI-----GFNIKLPNQQQP--NKYIDHDKLV----------SFQYFFVRKV 147 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQ---GR-EVFALPGPIGNPGSEGPHWLIKQ 268 + ++ + + G+L A+ G+ E F + +G EG + I++ Sbjct: 148 MFMKYAQAFIALPGGF--GTLDEVMEAITLIQTGKSERFPV-ILVGRSYWEGFYRWIEE 203 >UniRef50_Q6MD50 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q6MD50_PARUW Length = 230 Score = 74.9 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 24/168 (14%) Query: 97 FVEG-ELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FV+G E +++ GS ++ +G I +G GI A+ Sbjct: 30 FVDGFETMTNLGPSVSIFGSARLPPESIYYNLAVDVARHISRKGFAIITGGGPGIMEAAN 89 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 K A + G S GL P ++ F R Sbjct: 90 KGAQESKGHS-----CGLAIDLPFESEP--NRFID----------FKYRLNFRYFFIRKV 132 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPGS 259 + ++G + + + G+L AL Q +++ A P + Sbjct: 133 MFIRYAQGYVFLPGGV--GTLDELFEALTLIQTKKIKAFPIYLMGKAY 178 >UniRef50_C7P1D2 Putative uncharacterized protein n=3 Tax=cellular organisms RepID=C7P1D2_HALMD Length = 157 Score = 74.9 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 42/185 (22%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ---------V 159 +++V+G S R E LA RG + G G+ + A Sbjct: 2 RVSVIGGSTVSSDEYELARRVGECLAQRGHAVVCGGLGGVMEAVCRGARDGRESTASPGA 61 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G +I +L P A ++ P RN ++ Sbjct: 62 GGHTIGIL--------PGERRAAANEYVD------------TPIATGLGHARNAVVVMNG 101 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIK-QGAILVTEPEE 278 V+ ++ G+L R + L G H + G V PE Sbjct: 102 DAVIAIDGG--GGTLSELGYGHVFDRPIAGL----------GTHQIESLDGIEHVATPEA 149 Query: 279 ILENL 283 ++ + Sbjct: 150 AVDYV 154 >UniRef50_A8I784 Putative Rossmann fold nucleotide-binding protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I784_AZOC5 Length = 181 Score = 74.6 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 35/175 (20%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + ++G + + E A G+T+ +G G+ A + A G++I ++ + Sbjct: 28 VGIIGPKNANPEQETLAEALGRAFAKLGLTLLTGGRMGVMQAASRGAFSAGGLTIGIIPD 87 Query: 170 GL-NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 G +T +P LA P RN I++ + ++ V Sbjct: 88 GEWDTANPYVTVPLA---------------------TGLGPARNAIVARACEALVAVGGE 126 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENL 283 G+L + R V ++ + + G + EE+ E + Sbjct: 127 Y--GTLSEMAFGMHFDRLVLSM-----------LNAPVVNGVVACATIEEVTERV 168 >UniRef50_Q72BV5 Decarboxylase family protein n=8 Tax=Bacteria RepID=Q72BV5_DESVH Length = 218 Score = 74.6 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 47/166 (28%), Gaps = 26/166 (15%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS L G + +G G+ +K A + G S+ Sbjct: 39 KCVSIFGSARVPRDSPLYADTEAIARLLVQAGYGVITGGGPGLMEAGNKGAFEAGGESV- 97 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GL+ P S + F R + + +V+ Sbjct: 98 ----GLHIHLPFEQ--------------DSNQYIKTRCDFRYFFVRKLMFIKYALAYVVM 139 Query: 226 EAALRSGSLVTARCA--LEQGREVFALPGPIG-NPGSEGPHWLIKQ 268 + G++ A L Q R + P + + G I+ Sbjct: 140 PGGM--GTIDELSEAFVLAQTRRIKPFPIILYKSEFWNGLLDWIRD 183 >UniRef50_C7LYN6 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYN6_ACIFD Length = 340 Score = 74.2 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 50/207 (24%), Gaps = 37/207 (17%) Query: 39 LQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFV 98 G Q L + E+ L L + ++ L Sbjct: 11 PAVAGRDSDLKQLLLDEALAATEAPLDRL---DLKMLT-------SALRELRSAFETFG- 59 Query: 99 EGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAA 156 ++ V GS + LA G + +G GI A + A Sbjct: 60 ----PFRTQRKVTVFGSARTHPDEPSYQLAETLGARLAQAGWMVITGGGPGIMEAAARGA 115 Query: 157 LQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 + G+N P L E G L F R ++ Sbjct: 116 GPHH-------AFGINIRLPLEQPGD-HELAEHGRLL----------EMKYFFTRKVLMV 157 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQ 243 S + + L G+L L Sbjct: 158 RESDAFISLPGGL--GTLDETFELLTL 182 >UniRef50_C8N6B1 Methionyl-tRNA formyltransferase n=3 Tax=Proteobacteria RepID=C8N6B1_9GAMM Length = 332 Score = 73.8 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 73/232 (31%), Gaps = 34/232 (14%) Query: 97 FVEGELHAL-HSFQLAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG +++ GS R + + + R + L+ G ++ SG G+ A+ Sbjct: 124 FVEGFEKLAVIPPSVSIFGSARLPAEHPVCQQTREIAKRLSDAGFSVVSGGGPGVMEAAN 183 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRH-ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 + A L GLN P + + EF +F R Sbjct: 184 QGAYAGEKG----LSVGLNIQLPHEQSSNQFQDISL-------EF--------RHFFSRK 224 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQ-----GREVFALPGPIGNPGSEGPHWLIK 267 + + +V+ G+L L R++ + +G+ G ++ Sbjct: 225 VMFVKYANAYVVMPGGF--GTLDELAEILVLIQTGKSRKIPVI--LVGSDFWRGLLAWME 280 Query: 268 QG--AILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV 317 A + + E++ A FY + + LL + Sbjct: 281 ATMVAQGLIKAEDMQLMTLVDDADAVVAAILDFYEGREFAPSAEEERLLRQL 332 >UniRef50_Q0RCV0 Lysine decarboxylase family protein n=94 Tax=Bacteria RepID=Q0RCV0_FRAAA Length = 319 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 27/183 (14%) Query: 97 FVEGELHALHSF-QLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG + V GS + GR LA G + +G G + Sbjct: 116 FVEGFGLLAELPRAVTVFGSARITADDPIYAQGRRLGAALAEAGFAVITGGGPGAMEAVN 175 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + A + G+S+ GL P ++ G F R Sbjct: 176 RGAQEAGGLSV-----GLGIELPFEQR--LNDWVDLG------------VSFRYFFVRKT 216 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQGA 270 + ++ +++ + G+L AL G+ IG+ G ++ Sbjct: 217 MFVKYAEAFVILPGGV--GTLDELFEALTLVQTGKVTRFPVVLIGSEYWSGLVGWLRSTV 274 Query: 271 ILV 273 + Sbjct: 275 LPA 277 >UniRef50_B6BV32 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BV32_9PROT Length = 242 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 45/169 (26%), Gaps = 32/169 (18%) Query: 108 FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS S + L+ G I +G G+ A K A SI Sbjct: 47 PAISFFGSARSKPSDKFYKLSEEIAFKLSESGFNIITGGGPGLMEAASKGAFNGKSKSI- 105 Query: 166 VLGNGLNTIHPRR-HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN I P+ + + F R + + +V Sbjct: 106 ----GLNIILPKEQNPNPYQDI---------------SINFKYFFMRKVMFVKYAFAYVV 146 Query: 225 VEAALRSGSLVTARCALEQ-----GREVFALPGPIGNPGSEGPHWLIKQ 268 G+L L ++V + + +G + Sbjct: 147 APGGF--GTLDEFSEVLTLIQTNKSKKVPVILVGVD--FWQGLQDWFQN 191 >UniRef50_Q2LWS8 Lysine decarboxylase family n=15 Tax=Bacteria RepID=Q2LWS8_SYNAS Length = 219 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 30/169 (17%) Query: 107 SFQLAVVGSRAHSW----YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 +++ GS YG+ + LA +G ++ +G GI A+K A + G Sbjct: 39 RNAVSIFGSARLKPGDLWYGK--AEYLAKRLAEKGFSVITGGGPGIMEAANKGAAEAGGK 96 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 S+ G+N P +V F R + + Sbjct: 97 SV-----GMNIRLPFEQKPNP--------------YSNVSIDYKYFFIRKVMFVKYAVAY 137 Query: 223 LVVEAALRSGSLVTARCALE--QGREVFALPGP-IGNPGSEGPHWLIKQ 268 ++ G+L AL Q + + + P +G+ +G + Sbjct: 138 VIFPGGY--GTLDELFEALTLIQTKRIKSFPVILLGSDYWKGLMDWLND 184 >UniRef50_B1I515 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B1I515_DESAP Length = 162 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 23/163 (14%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + V+G+ S W +A R + G G+ A + A + G+ + VL Sbjct: 4 VGVIGAGLCSSEVSGWAEAVGAGIARRQGVLICGGMGGVMEAAARGARREGGLVVGVLPG 63 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 E L + RN +I+ S ++ ++ Sbjct: 64 --------------NDRKEGNPYL------SLSLATGLGDARNAVIARASDVLIAIDGGY 103 Query: 230 RSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAIL 272 G+L AL+ GR V L G S+GP I A Sbjct: 104 --GTLSEIGLALKMGRPVIGL-GTWRIESSKGPDGGIIAAADP 143 >UniRef50_A5D3K0 Predicted Rossmann fold nucleotide-binding protein n=4 Tax=Bacteria RepID=A5D3K0_PELTS Length = 167 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 26/146 (17%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 G + + +A G + +G GI + K A G++I +L Sbjct: 3 GGESAPPEDCAAAYRLGQLIAEEGWVLLNGGRPAGIMEASAKGAKDRGGLTIGILPGN-- 60 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 RHA + P + RN I S V+ + + G Sbjct: 61 ---SARHASKYIDI---------------PVVTGMGDARNVINVLTSDAVVALPG--KGG 100 Query: 233 SLVTARCALEQGREVFAL---PGPIG 255 ++ AL+ G++V L PG I Sbjct: 101 TISEVALALKNGKKVVLLNFDPGKIF 126 >UniRef50_Q1IJ66 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1IJ66_ACIBL Length = 275 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 65/202 (32%), Gaps = 35/202 (17%) Query: 84 PQLLATTDYPGALFVEG-ELHALHSFQLAVVGSRAHSW--YGERWGRLFCETLATRGVTI 140 +L +D FV+G + + V GS G LA G + Sbjct: 66 ERLKRISDE----FVQGFDKLYGVGPAVTVFGSARFHEGHKYYDLGCEVGRELAKAGFAV 121 Query: 141 TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 +G G+ A++ A + G S+ GLN I P A + D Sbjct: 122 LTGGGPGMMEAANRGAKEAGGASL-----GLNIILPFEQAP--------NPYV------D 162 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA--LEQGREVFALPGP-IGNP 257 + F R + S + + G+L A L Q ++ P IG Sbjct: 163 QTIEFHYFFVRKVCLVKYSCAFICLPGGF--GTLDELFEAATLIQCGKIGPFPLILIGEE 220 Query: 258 GSEGPH----WLIKQGAILVTE 275 G L+ +GAI + + Sbjct: 221 FWSGVRDFTAHLLGEGAIGMED 242 >UniRef50_C5D816 Putative uncharacterized protein n=1 Tax=Geobacillus sp. WCH70 RepID=C5D816_GEOSW Length = 184 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 108 FQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++AV+G S +A R + +G G+ A K A + G+ I + Sbjct: 2 KRIAVIGQSGEIPDEVRHVAEEVGAEIAKRNAVLLTGGGSGVMEAASKGAKEAGGLVIGI 61 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 L + I A + G +F R+ I+ S ++++ Sbjct: 62 LAG--DRI---DVANDYIDIPITTGL--------------HFDFRSLILVHSSDALIMIR 102 Query: 227 AALRSGSLVTARCALEQGREVFAL 250 +G+L A + V + Sbjct: 103 GG--NGTLGELSAAYMNKKPVIII 124 >UniRef50_B8HT06 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT06_CYAP4 Length = 157 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AVVG+ + LA G+T+ G G+ A + A G +I +L Sbjct: 4 IAVVGAGQCDPETTVLAETVGQELAQAGITLICGGLGGVMAAACRGAKAAGGQTIGILPG 63 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 + A + G RN I+ ++ ++ V Sbjct: 64 S-----DPQMANAWVDIAIATG---------------MGEARNLILVHTAQALIAVGGEY 103 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ G+ V L Sbjct: 104 --GTLSEIAFALKLGKPVIGL 122 >UniRef50_A6Q9K3 Decarboxylase family protein n=3 Tax=Epsilonproteobacteria RepID=A6Q9K3_SULNB Length = 315 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 38/176 (21%) Query: 119 SWYGERWGRLFCETLATRG-------VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 + Y R F + G VT+ +G GI A++ A V +I GL Sbjct: 137 THY-YDTAREFGRLVGNSGKGPDDARVTLMTGGGPGIMEAANRGAFDVGAKTI-----GL 190 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPL---DVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 N P + E +F RR +K ++V Sbjct: 191 NITLPYEQYP--------NPYITPELCFRLHYFAVRKMHFLRR-------AKALVVFPGG 235 Query: 229 LRSGSLVTARCALE--QGREVFALPGPIGNPGSEGPHWLIKQGA--ILVTEPEEIL 280 G++ L Q R+V +P I S + + +G V +PE++ Sbjct: 236 F--GTMDECFEVLTLVQTRKVDPIP-IIFVGESYWKNMVYFEGFVEEGVIDPEDMD 288 >UniRef50_Q53755 ORF; NCBI gi: 508804. (Fragment) n=2 Tax=Streptomyces RepID=Q53755_STRAU Length = 141 Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 4/131 (3%) Query: 237 ARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPEN 296 AR A GR +PGP + S G H L++ A LVT+ E++E + P E Sbjct: 1 ARRAQRPGRLTMGVPGPATSGLSAGVHELLRGEAQLVTDAAEVVELVGDIGELAP---ER 57 Query: 297 SFYSPDQQDVALPFPELLANVGDE-VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + + +L + ++ + A EV+ +L EL G++ Sbjct: 58 RGPVLARDLLPPDTVRVLDALPAGRAARLEEITLAAATGTDEVIGRLYELHSLGFVERQG 117 Query: 356 GGYVRLRRACH 366 G+ R Sbjct: 118 DGWRLTPRTPR 128 >UniRef50_B3T5D8 Putative Possible lysine decarboxylase n=2 Tax=prokaryotic environmental samples RepID=B3T5D8_9ZZZZ Length = 190 Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 47/157 (29%), Gaps = 28/157 (17%) Query: 97 FVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHK 154 FV+G H +AV GS S ++ T+ G + G G+ K Sbjct: 10 FVDGVGSMSHRPTVAVFGSNDLSDSPDVQQLCEDLGRTIVDLGCRVACGGLGGVMSAVCK 69 Query: 155 AALQV----NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 A G +I +L G A ++ G Sbjct: 70 GARSSARYTEGDTIGILPMG-----DFESANEFIDVIIPTGL---------------GLF 109 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 RN +++ + V+ G+L A + + V Sbjct: 110 RNMLVARAGDACIGVKGGA--GTLSEIAFAWQIKKPV 144 >UniRef50_B3EM50 Putative uncharacterized protein n=7 Tax=Chlorobiaceae RepID=B3EM50_CHLPB Length = 235 Score = 71.5 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 23/163 (14%) Query: 109 QLAVVGSRAHSWYGERWG--RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++A+ GS S + + LA G + +G G+ A+ N + ++ Sbjct: 30 RVAIFGSARISEEDREYLDVFAIAKALAESGFDVVTGGGPGLMNAANAGHKSANSPTHSI 89 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 GLN P S + LD+ F R LS ++V Sbjct: 90 ---GLNIRLPHEEMP-------------SPY-LDIKQDFNRFSSRLDTFMALSDAIIVAP 132 Query: 227 AALRSGSLVTARCALE--QGREVFALPGPIGNPGSEGPHWLIK 267 + G+L+ A + Q + P + G +K Sbjct: 133 GGI--GTLLELFYAWQLVQVEHICETPVILYGSLWGGLLEWMK 173 >UniRef50_Q254M4 Putative uncharacterized protein CF0492 n=2 Tax=Chlamydophila RepID=Q254M4_CHLFF Length = 237 Score = 71.5 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 23/152 (15%) Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 H+ + + VVG + + + + LA G ++ +G GI A+ Sbjct: 54 HSDYGPWVVVVGGCSPTDENYKKAQHAGLLLAMNGYSVVTGSGPGIMEAANSGT------ 107 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 VL G++ + L + E VS + R + G S G Sbjct: 108 ---VLAGGISLGFILKGEDLNEYIPEGNYLQVS-----------HISHRLEGMIGNSSGC 153 Query: 223 LVVEAALRSGSLVTARCALEQGREVFALPGPI 254 + L G+L AL+ R A+P P+ Sbjct: 154 IAFPGGL--GTLDEVVFALDNFR-YQAVPRPV 182 >UniRef50_B5EDM7 Putative uncharacterized protein n=3 Tax=Geobacter RepID=B5EDM7_GEOBB Length = 169 Score = 71.1 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 96 LFVEGELHALHSFQLAVVGSRAHSWYGERW-GRLFCETLATRGVTITSGLARGIDGVAHK 154 ++ G L ++A + SR G R + + G + SG ++ Sbjct: 21 MYSIGNEEILMQQKVAFLCSRKV-PQGVAVKARRWADEQRELGRCVISGYHSPLEKAVLC 79 Query: 155 AALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD-VPPLAYNFPRRNR 213 L I + GL I P A + ++S + P +RN+ Sbjct: 80 RLLLGTQPIIVAMAQGLGRIDP----EWGAHISAGRLLVISRYAESVTHPCESKCYQRNK 135 Query: 214 IISGLSKGVLVVEAALRS 231 ++ L+ V++ A+ Sbjct: 136 MMMDLADQVVIAHASPGG 153 >UniRef50_B2UL52 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL52_AKKM8 Length = 352 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 38/138 (27%), Gaps = 22/138 (15%) Query: 108 FQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++V GS R F + G + +G GI A++ A + Sbjct: 74 RKISVFGSARIRNDEPAYETAREFAREASEHGYMVITGGGPGIMQAANEGAGEQRSF--- 130 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P ++ L+ Y F R S ++ Sbjct: 131 ----GLNITLPYEQTS--NHVVAHSDKLI---------NFYYFFVRKLNFVAESDAMVAF 175 Query: 226 EAALRSGSLVTARCALEQ 243 G++ L Sbjct: 176 PGGF--GTMDEVFETLTL 191 >UniRef50_A6BH93 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH93_9FIRM Length = 124 Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 4 TEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDA----VVLQQTGLTLRQAQRFLSFPRK- 58 E WL I + ++ I + + L + + + Sbjct: 3 YEYWLA--GIKEITDLKKQKLREVYGSGKAIYYIEETKLDKLRFLNEKDVAILKNAKKDT 60 Query: 59 SIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLA 111 +E E+ IP + YP +L TD P AL+V G+L + Sbjct: 61 KLEEKWRKTEEKRIQFIPYFLKTYPEKLKYITDPPYALYVLGQLPDEKRKKCG 113 >UniRef50_A2SQW5 Rossmann fold nucleotide-binding protein-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQW5_METLZ Length = 199 Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 31/159 (19%) Query: 104 ALHSFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 ++V+G + E++ L + G + SG G+ + A Sbjct: 1 MSRRPVISVIGDAAIEPGCAKEQFAFSLGNALVSNGYRVLSGGLGGVMEAVSRGAHASPA 60 Query: 160 --NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 G IAVL G + A ++ G RN I Sbjct: 61 YREGDVIAVLP-GND----PAQANPYTDIVIATGL---------------DHARN-FIVA 99 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFA--LPGPI 254 + V+ V SG+L A R + A +PG + Sbjct: 100 NTDAVVAVGGG--SGTLSELSYAWVMHRLIMAYRVPGVV 136 >UniRef50_B4U9G4 Putative uncharacterized protein n=3 Tax=Aquificaceae RepID=B4U9G4_HYDS0 Length = 247 Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 63/224 (28%), Gaps = 40/224 (17%) Query: 97 FVEGELHALH-SFQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FV G H S + GS + G + +G GI A+ Sbjct: 28 FVSGFDTLSHVSPAVTFFGSARFDENNFYYKKAYQLSYEFGKGGYNVITGGGPGIMEAAN 87 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDV-PPLAYNFPRRN 212 + A V+ GLN P+ P F R Sbjct: 88 RGAKDAG-----VISVGLNIKLPKEQKP---------------NPYHTLSMSFEYFFVRK 127 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPG-SEGP-----HW 264 ++ S LV G++ AL Q ++ P + EG + Sbjct: 128 VMLIRYSTAYLVFPGGF--GTMDELSEALTLIQTKKSPKFPLILFGKEFWEGLMDFYKNT 185 Query: 265 LIKQGAI------LVTEPEEILENLQFGLHWLPDAPENSFYSPD 302 LIK G I LV ++I E + L + + + Sbjct: 186 LIKHGTIDEEDLSLVHLTDDIDEAIAIVDKHLLEKIKLMEEEKE 229 >UniRef50_D1C8L6 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8L6_SPHTD Length = 280 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 29/191 (15%) Query: 97 FVEG-ELHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG + A + ++ GS S R L+ G I +G GI A+ Sbjct: 67 FVEGFDALARVTQGVSFFGSSRIDESDPMYAAARALAFDLSRAGFAIITGGGPGIMEAAN 126 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + A G+S+ G N P + ++ F R Sbjct: 127 RGAHDAGGLSV-----GCNIELPFEQG--------MNPYV------NLAINFRYFFVRKT 167 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNP-GSEGPHWLIKQG- 269 + ++ ++ G+L AL Q ++ P + +G + + Sbjct: 168 MFVKYAEAFVIFPGGF--GTLDELFEALTLIQTEKISYFPVILFGRDYWQGLIDWLARTV 225 Query: 270 -AILVTEPEEI 279 A + +++ Sbjct: 226 VAEGMISVKDL 236 >UniRef50_B6FLJ2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ2_9CLOT Length = 173 Score = 68.4 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 18/134 (13%) Query: 128 LFCETLATRGVT-ITSGLARGIDGVAHKAAL----QVNGVSIAVLGNGLNTIHPRRHA-- 180 + GVT +G+A G+D A + L NG++ L P Sbjct: 37 EIIRQIEENGVTHFITGMAIGVDMFAAEIVLGLKSAYNGIT-------LECAIPCETQAE 89 Query: 181 RLAASLLEQGGALVS----EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + + +L ++ + S E L +RNR + + ++ V SG+ T Sbjct: 90 KWSEALRDRYFDIASKCDKETLLQQRYTPDCMHKRNRYMVDQADYIIAVWNGKPSGTGKT 149 Query: 237 ARCALEQGREVFAL 250 + A +QG+ V + Sbjct: 150 VQYAQQQGKPVRVI 163 >UniRef50_A6C3L6 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3L6_9PLAN Length = 356 Score = 68.0 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 53/208 (25%), Gaps = 39/208 (18%) Query: 50 QRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF 108 Q ++ +++ + + + ++ L Sbjct: 30 QSIVASIKETADKLKQDQATRGDLKILDR-------ALKELRYAFKVF-----TPYRKQR 77 Query: 109 QLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++ V GS + F +A I +G GI AH A Sbjct: 78 KVTVFGSARTNPDDPSYQQALQFGRRMAEEKWMIVTGAGPGIMEAAHVGAGTD------- 130 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 + G+N + P ++ + LV F R + ++ Sbjct: 131 MSMGVNIMLPFEQEP--NYVIHKDEKLV---------NLNYFFTRKLLFVKEVHAIVCCA 179 Query: 227 AALRSGSLVTARCALEQ----GREVFAL 250 G+L A L R+ + Sbjct: 180 GGF--GTLDEAFETLTLVQTGKRDPMPI 205 >UniRef50_C6MAL3 Methionyl-tRNA formyltransferase n=14 Tax=cellular organisms RepID=C6MAL3_NEISI Length = 252 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 51/178 (28%), Gaps = 34/178 (19%) Query: 100 GELHALHSFQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 GE +++ GS + L+ G ++ SG GI A+K A Sbjct: 49 GEELRAIQPAVSIYGSARTPENHPDYEFTLRLARKLSDAGFSVISGGGPGIMEAANKGAF 108 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 ++ GLN + P D+ +F R + Sbjct: 109 AGASPAV-----GLNIVLPHEQKANPYQ--------------DLSIKFQHFFPRKVMFVK 149 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQ-------GREVFALPGPIGNPGSEGPHWLIKQ 268 + +V+ G+L +L R + + G G I++ Sbjct: 150 HAVAYVVMPGGF--GTLDELFESLTLVQTGKTPDRPIILV----GKDFWSGLLDWIRK 201 >UniRef50_B1WX38 CHP725-containing protein n=11 Tax=cellular organisms RepID=B1WX38_CYAA5 Length = 166 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 24/151 (15%) Query: 110 LAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVL 167 + V+G + + + +A + + +G G+ A+K A + G++I +L Sbjct: 7 IGVMGPGDSATEIDIKNAYELGKLIAQQDWILLTGGRNVGVMDAANKGAKEAGGLTIGIL 66 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 + + A + A+++ RN I S ++V Sbjct: 67 PSNHTK-----NVSDAVDI-----AILT----------DLGNARNNINVLSSD--IIVAC 104 Query: 228 ALRSGSLVTARCALEQGREVFALPGPIGNPG 258 + G++ AL+ + V L + Sbjct: 105 GIGLGTVSEIALALKNRKPVILLSESPESQQ 135 >UniRef50_C1ZHC5 Predicted Rossmann fold nucleotide-binding protein n=3 Tax=Planctomycetaceae RepID=C1ZHC5_PLALI Length = 359 Score = 67.6 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 89/341 (26%), Gaps = 61/341 (17%) Query: 29 AKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSL-CWLEQPNHHLIPADSEFYPPQLL 87 + + Q+ + + FL+ R+ + + + +I Sbjct: 11 GEAEEHTLISEQEPEIGGK--SAFLAQIREVADKLAHDQATRGDIKIIAR-------AAK 61 Query: 88 ATTDYPGALFVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLA 145 ++ V GS + F +A + +G Sbjct: 62 ELRYAFKVF-----TPYRLHRKVTVFGSARTPANHPDYLSSVEFGRLMARNNWMVLTGAG 116 Query: 146 RGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLA 205 GI AH A + G+N + P A S+++ LV+ Sbjct: 117 SGIMEGAHVGA---GLP----MSMGVNILLPFEQQ--ANSVIDGDPKLVT---------F 158 Query: 206 YNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGS-EG 261 F R + ++V G+L L G+ + P Sbjct: 159 RFFFTRKLMFVKEVHAIVVYPGGF--GTLDELFETLTLIQTGKRDMLPIVLVDQPDCNYW 216 Query: 262 P-------HWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELL 314 H L+++G + P + L + E + + L+ Sbjct: 217 CALQDFIRHQLLERG---LISPAD-LSLYRIVHSPAAAVSEVLSFYRVYNSMRFVKQNLV 272 Query: 315 ANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 + D + ++ +++ ++G I Sbjct: 273 LRLNH-PIS-DELLDQLNVEFADLL-------ISGRIERTA 304 >UniRef50_UPI0000DAED55 hypothetical protein Wendoof_01000178 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED55 Length = 103 Score = 67.6 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 10/104 (9%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIE 61 + E+WL L + I + + + + Q Sbjct: 9 KELEVWLSLART--IGPIKFFSILRTHGSLDEVLKYLNRVANDKVYGIQ--------DAR 58 Query: 62 SSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHAL 105 + E+ +IPA YP L P + G++ L Sbjct: 59 EEINNAERIGAKIIPACDPDYPDLLRNIPSCPPVITALGDISLL 102 >UniRef50_A5GUK3 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake n=22 Tax=Cyanobacteria RepID=A5GUK3_SYNR3 Length = 170 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN- 160 L ++A++G+R L +L G ++ + A+GI+ A + AL V+ Sbjct: 23 LQNTGQRRIAILGTRHVPVVSIHLVELLARSLVQEGHSMLTSGAQGINAAAIRGALAVDP 82 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 +L L P L +L LVS+ D PL N+ I Sbjct: 83 AKLTVILPQSLEQQAP-ESQELLEQVLH----LVSKPENDDLPLTEASTLCNQEIVSRCD 137 Query: 221 GVLVVEAALRSGSLVTA-RCALEQGREV 247 ++ A S +L+ A + A + G+ V Sbjct: 138 QLICF-AFHDSETLIQACQDAEDLGKVV 164 >UniRef50_A8GN14 Putatie DNA processing protein DprA n=1 Tax=Rickettsia akari str. Hartford RepID=A8GN14_RICAH Length = 107 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 1/84 (1%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 LRL+ ++ + L Q+++ F + + L Sbjct: 21 LRLIRSDNIGPKTFCSLIQLFGDAGTAIDNAP-DFSLQGGQSKQIKIFNKSDAAKEMDLL 79 Query: 68 EQPNHHLIPADSEFYPPQLLATTD 91 ++ + +I ++ Y LL D Sbjct: 80 KKNDTKIITYNAPEYSKSLLEIYD 103 >UniRef50_UPI0001B520AA hypothetical protein ShygA5_29070 n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B520AA Length = 148 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 27/159 (16%) Query: 110 LAVVGSRAHSWYGER-WGRLFCETLA-----TRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + G+R+ +G + + LF LA I G A+GID ++ L + G + Sbjct: 1 MTITGTRSTGHHGLKSYAELFAHYLAPFAGEETRFYI--GGAKGIDSLSL---LWLAGNT 55 Query: 164 IA----VLGNGLNTIHPRRHARL---AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS 216 A V+ ++ P + + + +E L P + RNR + Sbjct: 56 HAQITIVVPGTIHQQPPEAQQAITRSRDRITDVVELHAAE--LGSPA----YHARNRWMV 109 Query: 217 GLSKGVL---VVEAALRSGSLVTARCALEQGREVFALPG 252 S V+ ++ +G+ T EQG+ +P Sbjct: 110 DHSDMVIGFPLIGPQGTAGTWQTLNYGAEQGKPHLIVPV 148 >UniRef50_D0T8Z4 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=D0T8Z4_9BACE Length = 159 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%) Query: 100 GELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 G L + A + S S + + G + SG + ++ L+ Sbjct: 7 GNKELLKLKKTAFLASSTISSETVLKCYDWATEMRRHGECVISGFSSKLEQDVLHFLLKG 66 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 + I VL + + P L A + + ++S RNR I +S Sbjct: 67 TQLIIIVLARKMYKVIPAE---LQAPMEQNRLLIIS-VSNATRQSRTTALARNRYICEIS 122 Query: 220 KGVLVVEAALRS 231 + +L V S Sbjct: 123 ERILFVGVTESS 134 >UniRef50_Q0BL10 Possible Rossmann fold nucleotide-binding protein n=18 Tax=Francisella RepID=Q0BL10_FRATO Length = 237 Score = 64.9 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 29/160 (18%) Query: 108 FQLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS S + ++L+ G + +G GI +K A Q + SI Sbjct: 46 PAISIFGSARISKDDRYYKDTVELAKSLSDHGFAVITGGGPGIMEAGNKGAQQGSCSSI- 104 Query: 166 VLGNGLNTIHPRRHA-RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P + L+ F R + S ++ Sbjct: 105 ----GLNITLPHEQRPNQYQDI-----FLI----------YRYFFTRKAMFIKHSMSYII 145 Query: 225 VEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEG 261 + G+L G++V +P + G Sbjct: 146 MPGGF--GTLDELFDITTLIQTGKKVK-MPIILYGKDFWG 182 >UniRef50_A0YHC8 Lysine decarboxylase family protein n=3 Tax=Bacteria RepID=A0YHC8_9GAMM Length = 226 Score = 64.9 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 28/166 (16%) Query: 109 QLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++V GS + + L+ G+ + +G GI ++ A G+S+ Sbjct: 40 AVSVYGSSQLHEDNHYSQQAETLGRILSASGLAVITGGGPGIMEAVNRGAFGGKGMSV-- 97 Query: 167 LGNGLNTIHPRRH-ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN PR A + F R + + G ++ Sbjct: 98 ---GLNIDLPREQVANNYQDISL---------------DFRYFFVRKFLFVKHAVGFVIF 139 Query: 226 EAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQ 268 G++ AL G+ IG G ++Q Sbjct: 140 PGGY--GTMDELFEALTLVQTGKVDPFPIVLIGVSYWSGLIDWLQQ 183 >UniRef50_A1KLI6 Putative uncharacterized protein BCG_2511 n=10 Tax=Mycobacterium tuberculosis complex RepID=A1KLI6_MYCBP Length = 207 Score = 64.5 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 50/170 (29%), Gaps = 23/170 (13%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+ V GS +A +G + SG G + + A +G+ + VL Sbjct: 28 QIGVFGSGTIGPRVYELAYQVGAEIAKQGHILISGGMTGTMEASSRGASDADGLVVGVLP 87 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 + + + RN I G +VV Sbjct: 88 G--------------DKFTDGNAYSTIKILSGMQF------ARNYITGLSCHGAIVVGG- 126 Query: 229 LRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEE 278 SG+ AR E GR + G+P L Q V PE+ Sbjct: 127 -SSGAYEEARRVWE-GRGPVVVLANSGSPTGASAQMLSMQEIFGVAFPED 174 >UniRef50_Q020S9 Putative uncharacterized protein n=3 Tax=Bacteria RepID=Q020S9_SOLUE Length = 267 Score = 64.2 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 41/150 (27%), Gaps = 34/150 (22%) Query: 109 QLAVVGSRA------HSWYGERWGRLFCETLAT---------RGVTITSGLARGIDGVAH 153 + GS R+ + L + SG GI A+ Sbjct: 51 TVVFFGSARLRENDGPLSEYYEQARVLAKMLTEWSVQFTNGTYRFVVCSGGGPGIMEAAN 110 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + A + G ++ GLN P + D+ + F R Sbjct: 111 RGASEAGGKTV-----GLNIGLPFEQFP--------NPYIT----PDLSFEFHYFFMRKF 153 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + L+K ++V G+L L Sbjct: 154 WFAYLAKALVVFPGGF--GTLDELMEILTL 181 >UniRef50_C0QXQ1 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXQ1_BRAHW Length = 221 Score = 63.8 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 26/168 (15%) Query: 97 FVEGELHALHSF-QLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FVEG + +++ GS S + + L I +G GI + Sbjct: 27 FVEGFETMSYYKNAVSIFGSARTSQDHPHYKLAYETAKLLGENKYDIITGGGPGIMEAGN 86 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 + A N SI GL P + E F R Sbjct: 87 RGAFDANAGSI-----GLCIELPFEQK--------TNPYVKEEL------KFRYFFARKV 127 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPGS 259 + +K V++ G++ L Q + + +P + N Sbjct: 128 MFLKYAKAVIIFPGGF--GTMDEMFETLTLIQTKVLDRMPLIVMNSSY 173 >UniRef50_C5PUJ3 Possible Rossmann fold nucleotide-binding protein n=3 Tax=Sphingobacteriales RepID=C5PUJ3_9SPHI Length = 251 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 30/153 (19%) Query: 97 FVEGELHALH-SFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 F++G + V GS R ++ G TI +G GI A+ Sbjct: 36 FIKGFRALHFIGPCITVFGSARFKEDHPYYALARKVSAEVSRLGFTIMTGGGPGIMEAAN 95 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRR---HARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 + A G S+ G N + P + L + F Sbjct: 96 RGARDAGGPSV-----GCNIVLPHEQHPNPYLDKYI-----------------NIEYFFV 133 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 R ++ S G++ + G+L + Sbjct: 134 RKELLRKYSFGIITLPGGF--GTLDELFETITL 164 >UniRef50_D1C515 Rossmann fold nucleotide-binding protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C515_SPHTD Length = 175 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +AV G + RW E +A G + G G+ A + A + G +I +L Sbjct: 2 IAVCGPNEATDEEIRWAEEVGERIALAGHALVCGGRDGVMAAACRGARRAGGATIGIL-- 59 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 P R A +E RN ++ + V+ + Sbjct: 60 ------PGTDRREANEWVEHVIC------------TGLGNARNAVVVASGEAVIAIGGGF 101 Query: 230 RSGSLVTARCALEQGREVFAL 250 G+L AL+ G+ V L Sbjct: 102 --GTLSEIALALKMGKHVIGL 120 >UniRef50_C8RQ20 Lysine decarboxylase n=5 Tax=Actinomycetales RepID=C8RQ20_CORJE Length = 270 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 67/228 (29%), Gaps = 45/228 (19%) Query: 61 ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQ-LAVVGSRA-- 117 ++S+ WL ++ SE FV+G + + V GS Sbjct: 24 QASIDWLHTDPWRVMRIQSE----------------FVDGFGALAKIPKAITVFGSARVK 67 Query: 118 HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 GR + G +G G+ ++ A + G+SI GL P Sbjct: 68 PGHEYYEKGRELGRLIHEAGYATITGGGPGLMEAPNRGAQESGGMSI-----GLGIELPM 122 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 ++ G F R + S+ + + G+L Sbjct: 123 EQG--MNQWVDLGL------------NFRYFFVRKTMFLKYSQAFICLPGGY--GTLDEL 166 Query: 238 RCAL--EQGREVFALPGP-IGNPGSEGPHWLIKQG--AILVTEPEEIL 280 AL Q ++ P IG G I+ + PE++ Sbjct: 167 FEALVMVQTEKIRKFPIILIGKEFWGGLVDWIRDRLVEEGMISPEDVD 214 >UniRef50_B5VZV5 Putative uncharacterized protein n=2 Tax=Arthrospira RepID=B5VZV5_SPIMA Length = 355 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 64/240 (26%), Gaps = 45/240 (18%) Query: 32 SHIDAVVLQQTGLT-LRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATT 90 I+ ++ + L + R LS + +S + + ++ +L Sbjct: 15 REINELIDELPELKHEKWILRSLSSLVRIAQSEIE---SLDWKILS-------AAVLDME 64 Query: 91 DYPGALFVEGELHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGI 148 + H ++ + GS S ++ +G + +G GI Sbjct: 65 QGFEIFY-----PYRHVRKICIFGSARTSPKAPEYDMAVELARSMTQQGFMVLTGAGGGI 119 Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 A+ A GLN P +E L+ F Sbjct: 120 MEAANLGAGAERSF-------GLNIKLPFEQFS--NPYIEGDPKLI---------KFKYF 161 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ---GR----EVFALPGPIGNPGSEG 261 R S + + G+L L G+ V + P G+ + Sbjct: 162 FTRKLFFLRESDALAMFPGGF--GTLDETFEGLTLAQTGKFGPAPVILIDHPGGDYWYDW 219 >UniRef50_B9XPZ5 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPZ5_9BACT Length = 343 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 22/140 (15%) Query: 106 HSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 H ++ + GS + + F + +A G + +G GI H+ A N Sbjct: 75 HKRKVTIFGSARTQPTKVEYQQAVEFGKKIADAGFMVITGAGGGIMHAGHEGAGLENSF- 133 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 G N P A +++ L++ F R I S + Sbjct: 134 ------GANIRLPWEQG--ANPVIQDDKKLIT---------FKYFFTRKLIFIRHSDAIA 176 Query: 224 VVEAALRSGSLVTARCALEQ 243 + G++ AL Sbjct: 177 LFPGGF--GTMDEGYEALTL 194 >UniRef50_Q937Z9 Putative uncharacterized protein n=1 Tax=Mycobacterium avium RepID=Q937Z9_MYCAV Length = 257 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 30/180 (16%) Query: 108 FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++ GS + R L G I +G GI A++ A + SI Sbjct: 68 RAVSFFGSARTPPDHPYYQLARTLAARLGALGFDIITGGGAGIMEAANRGAREAGVRSI- 126 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVS-EFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GL P +S EF F R ++ + +V Sbjct: 127 ----GLVIELPYEQRM-------NSFVDLSLEF--------KYFFVRKLMLVRYASAFVV 167 Query: 225 VEAALRSGSLVTARCALE--QGREVFALPGPI-GNPGSEGPHWLIKQG--AILVTEPEEI 279 G+L AL Q +++ P + G+ G I+ + + P+++ Sbjct: 168 FPGGF--GTLDELFEALTLIQTQKIRHFPVVLAGSQHWGGLEQWIRTQLLELGMISPDDV 225 >UniRef50_B8DTD8 Predicted Rossmann fold nucleotide-binding protein n=12 Tax=Bifidobacteriaceae RepID=B8DTD8_BIFA0 Length = 267 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 85/266 (31%), Gaps = 59/266 (22%) Query: 45 TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHA 104 + ++RFL + WL + ++ +E FV+G Sbjct: 40 SESTSERFLRNDSDT-----DWLHRDPWRVLRIQAE----------------FVDGFGSL 78 Query: 105 LHS-FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 +++ GS + + +A R + + +G GI A+K A + G Sbjct: 79 AELGPAVSIFGSARVEPNTKDYKAAVAMGAKIAERDIAVITGGGPGIMEAANKGAAKAGG 138 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 S+ GL P L + ++ F R + S G Sbjct: 139 KSV-----GLGIELPHE-QGLNKWI-------------NLGMTFRYFFVRKTMFMKYSSG 179 Query: 222 VLVVEAALRSGSLVTARCALE--QGREVFALP-GPIGNPGSEGPHWLI-----KQGAI-- 271 V+V G+L AL Q ++V +P + G I ++G I Sbjct: 180 VIVCPGGF--GTLDETFEALTLVQTQKVAKMPIVLFDSAYWRGLFDWIDGPVRERGMISN 237 Query: 272 ----LVTEPEEILENLQFGLHWLPDA 293 LVT ++I E + +P Sbjct: 238 IDPDLVTITDDIDEAVDVATSMVPRQ 263 >UniRef50_A9UTT7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UTT7_MONBE Length = 261 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%) Query: 86 LLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYG-ERWGRLFCETLATRGVTITSGL 144 L P A G H + ++GS YG E LA G + +G Sbjct: 26 LRQQLLAPEAD--VGPPTPRHLPIIGIMGSGT---YGHEELAEPLGRWLAAAGFHLLTGG 80 Query: 145 ARGIDGVAHKAAL---QVNGVSIAVLGNGL-NTIHPRRHA-RLAASLLEQGGALVSEFPL 199 RG+ A +A + +G +I ++ N + P+ + +++ P Sbjct: 81 GRGVMEAATRAFTTVPKRSGFAIGIIPCSEYNILEPKSGYPNDFVEIP-----IMTHLPP 135 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF--------ALP 251 + RN I + L+ V++ SG+ + V A+P Sbjct: 136 ---VEGSHMLSRNHINA-LTPAVVIALPG-SSGTASEVQHCRAYNTPVCIYSPDGIEAVP 190 Query: 252 G 252 G Sbjct: 191 G 191 >UniRef50_B8KW25 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KW25_9GAMM Length = 236 Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 23/134 (17%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + V GS S R + LA G+ + +G G+ A++ A + GVS+ Sbjct: 54 PAVTVFGSARSSPDSWEARAAGVLGGHLARAGIPVITGGGPGVMEAANRGAHEQGGVSV- 112 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + + V F R +++ S G V Sbjct: 113 ----GLNIELPTEQQP-------------NPYLTHVT-SFRYFLTRKFMLTRYSMGFAVF 154 Query: 226 EAALRSGSLVTARC 239 G+ Sbjct: 155 PGGF--GTADELFE 166 >UniRef50_B3DWL4 3-isopropylmalate dehydrogenase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWL4_METI4 Length = 377 Score = 61.5 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 37/162 (22%), Gaps = 27/162 (16%) Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERW--GRLFCETLATRGVTIT 141 L ++ + GS W + F + G + Sbjct: 91 QSLKEIRYAQSIF-----QPYRSFKKVTIFGSARIRPQSPEWLIAKDFARLMVESGFMVI 145 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDV 201 +G GI A A + GLN P +++ L+ Sbjct: 146 TGGGEGIMEAAQFGAGKDKSF-------GLNIRLPFEQKP--NEVIDGDPKLI------- 189 Query: 202 PPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 F R S + + G++ L Sbjct: 190 --NFRYFFNRKLHFVKESHAIALFPGGF--GTMDECFETLTL 227 >UniRef50_A0KCC4 Rossmann fold nucleotide-binding protein-like protein n=10 Tax=Burkholderia RepID=A0KCC4_BURCH Length = 201 Score = 61.5 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 37/202 (18%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN---GV 162 ++ + V+GS + LA G + +G +G+ +A V G Sbjct: 20 NNRTIGVMGSGK--EPWLAFSEPLGAWLAQAGFNLLTGGGQGVMLAVARAFAGVPGRAGR 77 Query: 163 SIAVLGNGLNTI--------HPRRHARLAASLLEQGGALVSEFP---LDVPPLAYNFPRR 211 SI +L + + +P + +++ P P N R Sbjct: 78 SIGILPTQADPVAGFVPLDGYPHP----FVDIP-----VLTPLPRREPGAAPDTIN---R 125 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAI 271 N + S ++ + G+ A + + GP +G + A+ Sbjct: 126 NYVNVLSSDLIVALPGGP--GTAEEIALAQRWRKPLVCF-GP------DGAFRSLVADAV 176 Query: 272 LVTEPEEILENLQFGLHWLPDA 293 + ++++ + Sbjct: 177 CTSSVDDVIRFIDDAFTAEQAQ 198 >UniRef50_Q0F226 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F226_9PROT Length = 352 Score = 61.1 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 40/259 (15%) Query: 108 FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++++ GS + R L G I +G G+ A++ A + N +I Sbjct: 76 RKVSIFGSARTQPTHPRYIQTRECARALKEAGFMIITGGGGGLMQAANEGASEQNSFAI- 134 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 N P A +++ F R S V++ Sbjct: 135 ------NINLPMEQQ--ANPVMDGSP---------RHFYCQYFFTRKLFFLKESDAVVLT 177 Query: 226 EAALRSGSLVTARCALEQ---GR----EVFALPGPIGNPGSEGPHWLIKQGAI-LVTEPE 277 G+L A L GR V L P + +++ A + + + Sbjct: 178 PGGF--GTLDEAFETLTLLQTGRNPPIPVVLLEAPGDDYWGPLTRSWMRRLAHDQLIDAD 235 Query: 278 EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 + + +Y+ + LL + D V ++ + Sbjct: 236 DHHLLYHTDNIHSVVEYISDYYTNYHSFRYVGQCILLRMLN--PLS-DDVMQQLNAEFSD 292 Query: 338 VVTQLLELELAGWIAAVPG 356 V++ G I V G Sbjct: 293 VLS-------QGCIEQVFG 304 >UniRef50_C6A3N5 Oxidoreductase n=7 Tax=Thermococcaceae RepID=C6A3N5_THESM Length = 170 Score = 60.7 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 27/146 (18%) Query: 109 QLAVVGS--RAHSWYGERWGRLFCETLATRGVTIT--SGLARGIDGVAHKAALQVNGVSI 164 Q+A+ GS + F + LA T+ +G GI +A + + G+ + Sbjct: 3 QIAIAGSSDTEPLPKAVEKTKEFIKELAKYKDTVVLLTGGRGGIMEIASREFARFGGLVV 62 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L R+ ++ + G +F R+ I+ + ++V Sbjct: 63 GILPE-------RQKGNEFNTIRIKTG--------------MDFAERSAIMINSADVLVV 101 Query: 225 VEAALRSGSLVTARCALEQGREVFAL 250 + + G++V A A + + + + Sbjct: 102 LGGGI--GTMVEALMAYDYSKVLVVV 125 >UniRef50_D1U3P8 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3P8_9DELT Length = 158 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 27/151 (17%) Query: 105 LHSFQLAVVGSRAHSWYG-----ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + ++V+GS LA G + G G+ A K A + Sbjct: 1 MAKSHVSVIGSGQCGPNSEGRALYAAAVELGGLLARNGYVVVCGGLGGVMEGACKGAREA 60 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 G +I +L P A + +E +P P RN ++ Sbjct: 61 GGRTIGIL--------PSSDRTTANAWVE------------IPIATGLGPMRNMLVVTNG 100 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREVFAL 250 ++ V G+L A + G+ V A+ Sbjct: 101 DVIVAVGGGF--GTLSEVALARKTGKPVVAI 129 >UniRef50_B8KNF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNF2_9GAMM Length = 223 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 26/164 (15%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R R + +A GV++ +G G+ ++ A +G SI Sbjct: 41 PAVSIFGSARVNEDSWEYRSARALGQLMADAGVSVITGGGPGVMEAGNRGARSGDGRSI- 99 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN PR LA ++ F R ++ + G + Sbjct: 100 ----GLNITLPREQ--LANPYVD------------TDIAFNYFFTRKFMLIRYAMGFAIY 141 Query: 226 EAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLI 266 L G++ L G+ +G+ G + + Sbjct: 142 PGGL--GTIDELFELLTLVQTGKLQPCPLVLVGHDYWSGLYNWL 183 >UniRef50_C7H8R4 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C7H8R4_9FIRM Length = 191 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 33/158 (20%) Query: 117 AHSWYGERWGRLFCETLATRGVT-ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 + + GVT +G+A G+D A + L + + Sbjct: 44 RCTSLKSVMRDQIVALIENEGVTHFITGMALGVDMYAAEIVLDLKSK------------Y 91 Query: 176 PRRHARLAASLLEQGGAL-VS----------------EFPLDVPPLAYNFPRRNRIISGL 218 P H L +++ + A+ S E L +RNR + Sbjct: 92 P--HITLESAIPCETQAIKWSVASRERYYNIAAKCDKETMLQREYTPDCMDKRNRYMVDH 149 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREVFAL-PGPIG 255 + +L V SG+ T R A ++G+ + + P + Sbjct: 150 ADYILAVWNGCPSGTGNTVRYAHKKGKSIIVINPVSLD 187 >UniRef50_B9L6N5 Putative uncharacterized protein n=1 Tax=Nautilia profundicola AmH RepID=B9L6N5_NAUPA Length = 222 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 27/138 (19%) Query: 108 FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS Y L+ +G I +G GI A+K A ++ Sbjct: 40 PAVSIFGSAREKPGHYYYEKATEISRGLSDKGYAIITGGGPGIMEAANKGAK------VS 93 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 + GLN P ++ + + F R S +++ Sbjct: 94 I---GLNIELPHEQH-------------INPY-VKTSLKFKYFFTRKVTFLKYSVATVMM 136 Query: 226 EAALRSGSLVTARCALEQ 243 G+L L Sbjct: 137 PGGF--GTLDELSEVLTL 152 >UniRef50_A4A6P7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A6P7_9GAMM Length = 220 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 23/138 (16%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS + R + + +A GV++ +G G+ ++ A G SI Sbjct: 41 PAISIFGSARVAEDSWEYRSAQSLGKLMAEAGVSVITGGGPGVMEAGNRGARSGEGRSI- 99 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P H +LA ++ F R ++ + G + Sbjct: 100 ----GLNITLP--HEQLANPYVD------------TDIAFRYFFTRKFMLIRYAMGFAIY 141 Query: 226 EAALRSGSLVTARCALEQ 243 + G++ L Sbjct: 142 PGGM--GTIDELFELLTL 157 >UniRef50_C7DBC8 DNA protecting protein DprA n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBC8_9RHOB Length = 100 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 265 LIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPV 324 LI+ GA LV ++LE ++ + A E+L +G Sbjct: 2 LIRDGATLVRSGADVLETIRPAPTP-QLELPPQSEPRRLSETAALHSEILNRLGPSPLAE 60 Query: 325 DVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + + V L++LEL G I GG + L Sbjct: 61 NQLIRDLKSAAAIVTPALIDLELEGKITRQSGGLIAL 97 >UniRef50_A3ZTY0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A3ZTY0_9PLAN Length = 284 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 38/135 (28%), Gaps = 33/135 (24%) Query: 119 SWYGERWGRLFCETLA-------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 S Y E R F + + I +G G+ A++ A + +I GL Sbjct: 107 SHYYEE-ARQFAKICSTNCHVDGQCDYVIVTGGGPGVMEAANRGAFEAEAPTI-----GL 160 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPL---DVPPLAYNFPRRNRIISGLSKGVLVVEAA 228 N P + E +F R +K ++V Sbjct: 161 NITLPDEQHP--------NPYVTPELCFLFHYFAMRKMHFLVR-------AKALVVFPGG 205 Query: 229 LRSGSLVTARCALEQ 243 G+L AL Sbjct: 206 Y--GTLDELFDALTL 218 >UniRef50_C7DH06 Rossmann fold nucleotide-binding protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH06_9EURY Length = 187 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 34/190 (17%) Query: 104 ALHSFQLAVVGSRAHSWYGERW---GRLFCETLATRGVTITSGLARGID---GVAHKAAL 157 Q+ V+GS A Y + E +A +G + G + D A + A Sbjct: 1 MPRRLQIGVMGSAADLKYAKEAERAAERMGELIAKKGGILVFGAEKDYDSLSTAACRGAK 60 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + G+++ V + ++ G + P + R ++ Sbjct: 61 KGGGLTVGV------------TYGKRKDIYQKEG-VDVIVPCGME----RGGGREFVLVL 103 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPG------PIGNPGSEGPHWLIKQGAI 271 V+ V SG+L A + + AL G + +G ++ Sbjct: 104 ACDAVIGVSGG--SGTLNELAVAYQADIPLIALQGFGGWADDMAGKFFDG---RKRRQVY 158 Query: 272 LVTEPEEILE 281 PEE +E Sbjct: 159 PAKTPEEAVE 168 >UniRef50_D1KD30 Rossmann fold nucleotide-binding protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KD30_9GAMM Length = 196 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 35/137 (25%), Gaps = 23/137 (16%) Query: 109 QLAVVGS-RAHSWYGERW-GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 + V GS R L+ G + +G GI + A + SI Sbjct: 23 NITVFGSARIAQDDPLAVEAYRLGRLLSDHGFNVLTGAGPGIMEAINHGAFEGKSKSI-- 80 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 GLN P+ L E + +F R + + + Sbjct: 81 ---GLNIRLPKEQNP--------NPYLD-ECLM-----FEHFFTRKVTLIKHADACVFFP 123 Query: 227 AALRSGSLVTARCALEQ 243 G+ L Sbjct: 124 GGF--GTTDELMEVLTL 138 >UniRef50_B6BN03 Lysine decarboxylase family protein n=3 Tax=Campylobacterales RepID=B6BN03_9PROT Length = 256 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 51/172 (29%), Gaps = 32/172 (18%) Query: 97 FVEGELHALHS-FQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAH 153 FV+G + V GS + + + L +RG I +G GI A+ Sbjct: 31 FVKGFDELGELGPTVTVFGSARTKKTHPYYKKAQKLSSMLGSRGFNIMTGGGPGIMEGAN 90 Query: 154 KAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP-PLAYNFPRRN 212 K A++ + V GLN + P F R Sbjct: 91 KGAIKHH----DVESIGLNIDLAFEQ---------------TANPFTTKDLSFDYFFSRK 131 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQ-------GREVFALPGPIGNP 257 ++ S ++ G+L AL G +VF + P Sbjct: 132 VMLVKYSIAYVIFPGGY--GTLDELFEALTLIQTRKVTGVKVFVVGVDFYKP 181 >UniRef50_A6NUC5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUC5_9BACE Length = 155 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 16/135 (11%) Query: 124 RWGRLFCETLATRGVT-ITSGLARGIDGVAHKAALQVNGVSIA-----VLGN---GLNTI 174 E LA GVT SG+A G+D A A L + G + A +L Sbjct: 6 ALTEQI-EQLARNGVTQFLSGMAEGVDTWAALAVLALRGKNDALKLHCILPCREQAEQWS 64 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV-EAALRSGS 233 P + + S+LEQ ++V ++ RNR + S +L V R G+ Sbjct: 65 APAQ--EMYRSILEQADSVV---YVNRDYRKDCMLERNRFLVEHSDILLAVYNGERRGGT 119 Query: 234 LVTARCALEQGREVF 248 T R A + GRE++ Sbjct: 120 AATIRYARKAGREIW 134 >UniRef50_A5GRY1 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Synechococcus sp. RCC307 RepID=A5GRY1_SYNR3 Length = 353 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 61/236 (25%), Gaps = 27/236 (11%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++A+ GS G + +G G+ A++ A Sbjct: 73 RKVAIFGSARTPEDDPVYALTVDVAAQAVACGFEVMTGAGPGVMEAANRGAGAGQSF--- 129 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + A ++ L++ +F R + ++V+ Sbjct: 130 ----GLNVQLPFEQS--ANPFIDGDEKLLT---------FRHFHTRKLFFLRETDAIVVM 174 Query: 226 EAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQF 285 G+L L + P PI +G + + + + L + Sbjct: 175 PGGF--GTLDELFEGLTLIQTSKNPPVPIVLLCPQGDDYWERWHSY----VDRALLDRGL 228 Query: 286 GLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQ 341 + + + F + + + P E+ Sbjct: 229 ISAEDNGLYTTASTAEEALHQIQDFYRVFHASRFRGEHL-QLLLHCELPASELHEI 283 >UniRef50_A6G407 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G407_9DELT Length = 179 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 29/177 (16%) Query: 124 RWGRLFCETLATRGVTITSGLARGIDGV----AHKAALQVNGVSIAVLGNGLNTIHPRRH 179 E RG I G G+ A ++A G + +L L+ P Sbjct: 13 ALAAELGEACVDRGWRIVCGGLGGVMRAVGEGARRSARASGGDVVGLLPT-LD---PST- 67 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + P + RN ++ V+ + G+L Sbjct: 68 ---------ANPFVDVAIPTGLQ------HGRNTLVVSSGDVVVALGGGA--GTLSELAL 110 Query: 240 ALEQGREVFAL---PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDA 293 A + + + AL PG + +E ++ + L P+A Sbjct: 111 AWQMDKPIVALTGEPGWAATLAGQALDHRRSDRIHEAATVDEAVDRVAELLKKSPNA 167 >UniRef50_C5VJ80 Putative uncharacterized protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VJ80_9BACT Length = 154 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 4/134 (2%) Query: 98 VEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL 157 G L + A + S + + + +RG I SG ++ L Sbjct: 7 YLGNQELLKQQKTAFLASSNIATETVLQVYDWATEMRSRGDCIISGFNSKLEQDVLHFLL 66 Query: 158 QVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + + I V+ + P L ++ + ++S RN+ I Sbjct: 67 KGSQPIILVIARKMYKTIP---THLQTAIKQNRLLIIS-ISNSTRQSKATALERNKYICH 122 Query: 218 LSKGVLVVEAALRS 231 L++ +L +S Sbjct: 123 LAEKILFAGVTEQS 136 >UniRef50_B0SEG9 Rossmann fold nucleotide-binding protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEG9_LEPBA Length = 254 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 19/129 (14%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 +R S W + + + R + I +G GI ++ A + S+A LN + Sbjct: 74 AREVSRLISEWADVLKQEIPDRNLHICTGGGPGIMEAGNRGAKEAGSKSVA-----LNIV 128 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P + ++ + F R +G++ G+ Sbjct: 129 LPHEQNP--------NPYV----NPELTFEFHYFFMRKLWFMKTCRGMIAFPGGF--GTF 174 Query: 235 VTARCALEQ 243 L Sbjct: 175 DELFETLTL 183 >UniRef50_UPI0001C31CB6 hypothetical protein Cwoe_3171 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CB6 Length = 260 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 70/223 (31%), Gaps = 30/223 (13%) Query: 110 LAVVGS-RAHSWY-GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +AV GS R R L G ++ +G GI A++ A + +SI Sbjct: 54 VAVFGSARTPDDDPQYRLAVETGRQLGQAGYSVITGGGGGIMAAANRGAQEAGALSI--- 110 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GL P L D+P + F R + + G +V Sbjct: 111 --GLAIELPFE--------EATNPYL------DLPLHFHYFFTRKVMFVRYASGFVVFPG 154 Query: 228 ALRSGSLVTARCALE--QGREVFALP-GPIGNPGSEGPHWLIKQG--AILVTEPEEILEN 282 G+L AL Q R++ + P +G+ ++ A P ++ Sbjct: 155 GF--GTLDELFEALTLIQTRKIRSFPLVLVGSAFWTPLLDWLRDSLLAGGKISPGDLD-- 210 Query: 283 LQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVD 325 L + A + Q A ++V D+ D Sbjct: 211 LIAVVDDAESAVAAVAAATAPQRRASTETTPPSSVADQPARPD 253 >UniRef50_Q47ZZ4 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZZ4_COLP3 Length = 182 Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 46/149 (30%), Gaps = 25/149 (16%) Query: 108 FQLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKA--ALQVNGVSI 164 Q+AV+G +R + + G + G G+ + + + +I Sbjct: 4 PQVAVIGNARIKLSILQHMAESVGLIINELGFHLVCGGLGGVMEASCIGHKSGDMPCQTI 63 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 +L + A ++ G V RN+++ V+V Sbjct: 64 GILPS-----IKADTANEFIDIVIPSGLDV---------------GRNQLVVASGFAVVV 103 Query: 225 VEAALRSGSLVTARCALEQGREVFALPGP 253 + G+L A + + + + G Sbjct: 104 LGGGA--GTLSEVALASQFNKPILLMKGS 130 >UniRef50_B9D5I3 Putative uncharacterized protein n=2 Tax=Campylobacter RepID=B9D5I3_WOLRE Length = 209 Score = 58.0 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 107 SFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN-GVS 163 + + GS S + + LA G + SG G+ A+K A + S Sbjct: 30 NPSVTFFGSARFDESSKYCKMAFSLAKELADGGFAVVSGGGPGVMEAANKGAYESGKSPS 89 Query: 164 IAVLGNGLNTIHPRRH 179 I GLN + P Sbjct: 90 I-----GLNIVLPFEQ 100 >UniRef50_C5EYK0 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C5EYK0_9HELI Length = 212 Score = 57.6 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 18/140 (12%) Query: 106 HSFQLAVVGSRAHSWYGE--RWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + + G + + + LA G +I +G GI A+ A + + Sbjct: 21 YQNVVTIFGGARIPKENKNYKKIQKLAYELAKEGYSIMTGGGPGIMEAANFGAFKAKSKN 80 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 ++ GLN P E + E PL NF R + + S + Sbjct: 81 PNIVSIGLNIQLPHEQ--------EMNPYV--EIPL----KFQNFFSRKLVFNHNSTAFI 126 Query: 224 VVEAALRSGSLVTARCALEQ 243 V G+L L Q Sbjct: 127 VAIGGF--GTLDELSEVLVQ 144 >UniRef50_A9A3J4 Rossmann fold nucleotide-binding protein n=6 Tax=Thaumarchaeota RepID=A9A3J4_NITMS Length = 169 Score = 57.6 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Query: 107 SFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 Q+ V+G + + E+ +A + +G GI A + A +G+++ Sbjct: 4 KRQILVIGNNTNGCTPEHEKIAYDIGVEIAKSDSVLITGGLGGIMTAASRGAKDTDGLTV 63 Query: 165 AVLG 168 ++ Sbjct: 64 GIIP 67 >UniRef50_A3YY44 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YY44_9SYNE Length = 351 Score = 57.6 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 62/236 (26%), Gaps = 36/236 (15%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++AV GS + G + +G G+ A++ A + Sbjct: 68 RKVAVFGSARSLPQSSNYQLAEEVGREAMAAGFEVITGAGGGVMEAANRGAGAEHSF--- 124 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + G D F R S ++V+ Sbjct: 125 ----GLNIQLPFEQDP--NPYVSAAG--------DRLVHFRYFFTRKLFFLRESDALVVL 170 Query: 226 EAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQGAILVTE-PEEILE 281 G+L AL GR +P + P G L P+++L Sbjct: 171 PGGF--GTLDELFEALTLIQTGRT-APIPVVLLAP----------PGHELWQHWPQDLLT 217 Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPE 337 L+ PD + + + D + P+ E Sbjct: 218 GLEREGLIGPDDGDLISRAGSAFEAIELIRHFYRVFHTTRINDDELELLLHVPLAE 273 >UniRef50_B0CDG4 Decarboxylase family protein n=16 Tax=Cyanobacteria RepID=B0CDG4_ACAM1 Length = 365 Score = 57.2 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 53/222 (23%), Gaps = 38/222 (17%) Query: 35 DAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPG 94 VL Q Q + E L L + ++ L Sbjct: 20 FLDVLPQLKHGPLMVQALETV-LNMAEEDLDRL---DWKILT-------AALQDLEQGFQ 68 Query: 95 ALFVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVA 152 H ++++ GS + F + +G + +G GI Sbjct: 69 VF-----HRYRHIRKISIFGSSRLPPDSPAYQMAVDFARCVTQQGFMVMTGAGGGIMEAG 123 Query: 153 HKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRN 212 ++ A GLN P + L+ F R Sbjct: 124 NQGAGAEKSF-------GLNIQLPFEQDS--NPFIAGDEKLI---------DFKYFFTRK 165 Query: 213 RIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 + + + G+ A L + + P P+ Sbjct: 166 LFFLRETDAIALFPGGF--GTQDEAFECLTLSQTGKSPPVPV 205 >UniRef50_A9ITV3 Putative uncharacterized protein n=4 Tax=Bordetella RepID=A9ITV3_BORPD Length = 226 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 50/171 (29%), Gaps = 28/171 (16%) Query: 108 FQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 ++V GS S LA G + +G GI A+K A + G S+ Sbjct: 34 PAVSVFGSARISRDSPHYETCEAIAAALAEAGFAVIAGGGPGIMEAANKGAFEAGGTSV- 92 Query: 166 VLGNGLNTIHPRR-HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GLN P H ++ +S F R S + Sbjct: 93 ----GLNISLPHEAHNNEYQTIS------LS---------FEYFYSRKATFFMHSFAYVS 133 Query: 225 VEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIKQGAIL 272 + G++ AL G+ A +G+ G + + Sbjct: 134 LPGGF--GTMDELFEALTLIQTGKVPPAPIILVGSEYWHGLVEWLADQMLP 182 >UniRef50_C6LDA4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6LDA4_9FIRM Length = 169 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 105 LHSFQLAVVGSRA-HSWYGERWGRLFCETL---ATRGVT-ITSGLARGIDGVAHKAALQV 159 + V G R + G T SG A G+D + L+ Sbjct: 1 MEGKTCCVTGHRDLPQKEINHVKTALRREIDSAVADGFTRFMSGFADGVDQYFAEIVLEK 60 Query: 160 NGVS-----IAVLGNGLNTIHPRRHARLAA-----SLLEQGGALVS---EFPLDVPPLAY 206 + IAV+ + +R L A +LE +V E+ V Sbjct: 61 KKTNPALELIAVIP------YQKRLDSLMAKGRTYEMLEACADVVVMQEEYHPSV----- 109 Query: 207 NFPRRNRIISGLSKGVLVV-EAALRSGSLVTARCALEQGREVFALPG 252 + RNR + S V+ V + + G++ T R A + + + +P Sbjct: 110 -YSHRNRYMVEHSDRVIAVYDGREKGGTVRTIRFAHQMKKVLREIPV 155 >UniRef50_A3ZQ30 Rossmann fold nucleotide-binding protein-like n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ30_9PLAN Length = 204 Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 56/214 (26%), Gaps = 31/214 (14%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAAL---QVNGVSI 164 + V+GS +G + +A G + +G G ++ + G I Sbjct: 11 PIVGVMGSGKK-VHG-DLAKELGVWIAQAGYNLLTGGGGGEMKAVSESFFNVEERAGRVI 68 Query: 165 AVLGN-------GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 ++ +P + RN + Sbjct: 69 GIIPGDASGGSYSRRLHYPNE----FVEIPIYTHL------PQTGYEGMQVASRNHVNIL 118 Query: 218 LSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 S V+ + G+ AL GR V AL G + V E Sbjct: 119 SSDIVVALPGTK--GTAAEVCLALRYGRPVIALLGGRFKIP------GLPAEVQTVATVE 170 Query: 278 EILENLQFG-LHWLPDAPENSFYSPDQQDVALPF 310 E+ + + LP + P + + F Sbjct: 171 EVAKWITELEPKPLPSSCRLKKVVPPDEILTPDF 204 >UniRef50_C1DBD0 Lysine decarboxylase family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBD0_LARHH Length = 185 Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 22/140 (15%) Query: 110 LAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 +A+VG R + E LA G+T+ G G+ A + A G+ + +L Sbjct: 28 VAIVGPREATPEQEAVAYRLALALAGAGLTLVCGGKIGVMQAAARGARDAGGICVGLLPE 87 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 L P + RN +++ + ++ V L Sbjct: 88 --------------EEAAHGNPFLTVALPTGIG------LSRNMLVARSAACLVAVGGGL 127 Query: 230 RSGSLVTARCALEQGREVFA 249 G+L AL+ + VFA Sbjct: 128 --GTLSEIAMALQWKKPVFA 145 >UniRef50_D0DCS4 Decarboxylase family protein n=1 Tax=Citreicella sp. SE45 RepID=D0DCS4_9RHOB Length = 326 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 27/140 (19%) Query: 123 ERWGRLFCETLATR------GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 R F + + I +G GI A++ A++ ++ GLN P Sbjct: 140 YDIAREFGRIVGAAEGEHGNRLAIVTGGGPGIMEAANRGAVEAGARTV-----GLNITLP 194 Query: 177 RRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 + D+ F R ++ ++V G+ Sbjct: 195 HEQLP--------NPYVT----PDLCFRFRYFALRKLHFLLRARALVVFPGGF--GTFDE 240 Query: 237 ARCALE--QGREVFALPGPI 254 L Q R++ +P + Sbjct: 241 LFETLTLIQTRKIQPVPVIL 260 >UniRef50_Q2W812 Predicted Rossmann fold nucleotide-binding protein n=7 Tax=Proteobacteria RepID=Q2W812_MAGSA Length = 314 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 75/276 (27%), Gaps = 59/276 (21%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQ--QTGLTLRQAQRFLSFPRKS 59 +DTE WL S + K + + ++GL + + S + Sbjct: 1 MDTEAWL------SGGARRSFFMRKTFRKLGPFVSARREVSESGLPGASSAQTASPSYRL 54 Query: 60 IESSLCWLEQPNHHLIPADSEFY-PPQLLATTDYPGALFVEGE-LHALHSFQLAVVG--- 114 + +L + + I E P L + V G +V+G Sbjct: 55 AFEDVDFLLRQDLRPIRLQLELLKPELLQQQHGIKSTVAVFGSARIPSPERAQSVLGLAE 114 Query: 115 --SRA------------------HSWYGERWGRLFCETLAT-------RGVTITSGLARG 147 +R + R F + + + +G G Sbjct: 115 EEARNRPKDRQAARRLAVARRMVANSRYYEEARRFARIVTSTCAGEHVCDFVVKTGGGPG 174 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 I A++ A + G SI GLN + P S D+ + Sbjct: 175 IMEAANRGADDIGGKSI-----GLNIVLPMEQEPN------------SYITPDLCFRFHY 217 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 F R SK ++V G+L A Sbjct: 218 FAIRKMHFLTRSKALVVFPGGF--GTLDELFEAATL 251 >UniRef50_B5INH4 Decarboxylase family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INH4_9CHRO Length = 352 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 44/160 (27%), Gaps = 27/160 (16%) Query: 108 FQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++V GS + R E G + +G GI A+ A + + Sbjct: 80 RKVSVFGSARTTADDPSHALARELAEEAVAAGFEVITGAGGGIMEAANLGAGCEHSI--- 136 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + S F R S ++V+ Sbjct: 137 ----GLNVDLPFEQHP--------NPVVSS--CNGRLLHFRYFFTRKLFFLRESDALVVL 182 Query: 226 EAALRSGSLVTARCALEQ---GRE---VFALPGPIGNPGS 259 G+L +L GR L P +P Sbjct: 183 PGGF--GTLDELFESLTLIQTGRTPPMPLVLLAPPDDPFW 220 >UniRef50_B4R8A8 Conserved predicted Rossmann fold nucleotide-binding protein n=42 Tax=Proteobacteria RepID=B4R8A8_PHEZH Length = 236 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 109 QLAVVGSRAHSWYG-------ERWGRLFCETLATRGV-----------TITSGLARGIDG 150 + V GS G R F + RG I +G GI Sbjct: 25 TIVVFGSARIREDGPDPHPRWYAEARKFGAIASQRGGAHLSARRERHNVICTGGGPGIME 84 Query: 151 VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR 210 A++ A V SI GLN P A A ++ + F Sbjct: 85 AANRGAADVGAPSI-----GLNITLPHEQAPNA------------WSTPELTFRFHYFAM 127 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLIK 267 R ++ + +++ G+ L G+ EG Sbjct: 128 RKMHLAMRANALVIFPGGF--GTFDELFEILTLRQTGKSPPIPIVLFDRGYWEGAINFRA 185 Query: 268 QGAILVTEPEEI 279 + P ++ Sbjct: 186 LADAGMISPGDL 197 >UniRef50_D0LPT5 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPT5_HALO1 Length = 178 Score = 54.5 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 26/150 (17%) Query: 105 LHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV----N 160 + V+GS S L G+ + +G G+ A + A + Sbjct: 1 MRRPVATVIGSTRASAEQSALAHALGLALVDAGLRVLTGGLGGVMEAALRGARASARYQS 60 Query: 161 GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSK 220 G +IAVL + A AA ++ G RN I + Sbjct: 61 GDTIAVLPT-----YRAADANDAADIVICTG---------------MNHARNTIAVASAA 100 Query: 221 GVLVVEAALRSGSLVTARCALEQGREVFAL 250 V + RSG+L A E GR V + Sbjct: 101 VV--LAVGGRSGTLGELALAWELGRPVICV 128 >UniRef50_C9RJA6 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJA6_FIBSS Length = 280 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 34/130 (26%), Gaps = 25/130 (19%) Query: 120 WYGERWGRLFCETLAT------RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT 173 R L G I +G GI ++ A V SI GLN Sbjct: 88 ADSYNAARELAAKLGKWINKRHHGYAIMTGGGPGIMEAGNRGASDVGTPSI-----GLNI 142 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 P + E L F R +++ +++ G+ Sbjct: 143 KLPFEQH--------CNPYIDDELNL----QFRYFFVRKYWFLRMARALVIFPGGF--GT 188 Query: 234 LVTARCALEQ 243 L A L Sbjct: 189 LDEAFEMLTL 198 >UniRef50_B2KBS7 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBS7_ELUMP Length = 270 Score = 54.1 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 22/124 (17%) Query: 123 ERWGRLFCETLATRG---VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 F E + +G + +G G+ +++ A + G S+ G N P Sbjct: 104 YDEAVKFGEYVVKKGKNKFAVATGGGPGLMEASNRGAYKAGGKSV-----GFNITLPMEQ 158 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + E + L + F R + +K ++V G+ Sbjct: 159 KP-NDYITE-----------GMAFLFHYFAIRKMHLVIRAKAIVVFPGGF--GTFDEMFE 204 Query: 240 ALEQ 243 L Sbjct: 205 VLTL 208 >UniRef50_Q0F1L2 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q0F1L2_9PROT Length = 250 Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 20/173 (11%) Query: 84 PQLLATTDYPGALFVEGELHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTIT 141 + F+ + V+GS + +A RG+ + Sbjct: 36 EECRDKFRERPQAFL--NKAPGMRLTVGVMGSADSNQDDDIKDQVYQLGVAIAERGLVLI 93 Query: 142 SGLARGIDGVAHKAALQVNGVSIAVLGN-GLNTIHPRRHARLAASLLEQGGALVSEFPLD 200 +G G+ + + G S+ + L+ H S + L+ Sbjct: 94 TGACPGLPYACAEGVREAGGTSVGISPALSLD-----EHVHKYYSPADAYDVLI------ 142 Query: 201 VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGP 253 R S V++V RSG+L A ++G+ + L G Sbjct: 143 --YTGSGLMGREVTNIRSSDMVIIVGG--RSGTLGEFAIAFDEGKLIGVLRGS 191 >UniRef50_B7ATP8 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATP8_9BACE Length = 78 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362 +A ++ ++ +D++ E +V LL LEL I V Y + Sbjct: 16 LASEEEKVYGSICLIPKSIDIIIEETHLTPLKVCEILLNLELKDMIEQVSHNYYVRK 72 >UniRef50_C3XM44 Putative uncharacterized protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM44_9HELI Length = 215 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 20/141 (14%) Query: 107 SFQLAVVGSRAHSWYGERW--GRLFCETLATRGVTITSGLARGIDGVAHKAALQVN--GV 162 + + G + + + TLA+ +I +G GI A++ +Q Sbjct: 21 KNIITIFGGARVDSKHQAYISTQELAYTLASHNYSIMTGGGPGIMEAANRGLIQYKQESK 80 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 S ++ GLN P + E PL+ NF R + S S Sbjct: 81 SDSIFSIGLNIQLPLEQK--------MNPYV--EIPLEFQ----NFFSRKLVFSYNSTAF 126 Query: 223 LVVEAALRSGSLVTARCALEQ 243 +V G+L L Q Sbjct: 127 IVAMGGY--GTLDELSEVLVQ 145 >UniRef50_B6C594 Possible lysine decarboxylase family n=5 Tax=Bacteria RepID=B6C594_9GAMM Length = 271 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 29/136 (21%) Query: 117 AHSWYGERWGRLFCETLAT---------RGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 S Y R L R + +G GI A++ A + G++I Sbjct: 84 EMSKY-YEAARELARRLTEWSKALSDEERRFVVCTGGGPGIMEAANRGASEAKGMNI--- 139 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 GL P + E + ++ ++ + F R + L+K ++V Sbjct: 140 --GLTISIP---------IEEFDNSYITR---ELSFHFHYFFMRKFWFAYLAKAIIVFPG 185 Query: 228 ALRSGSLVTARCALEQ 243 G+L L Sbjct: 186 GF--GTLDELFELLTL 199 >UniRef50_B8H1X9 3-isopropylmalate dehydrogenase n=10 Tax=Alphaproteobacteria RepID=B8H1X9_CAUCN Length = 260 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 47/168 (27%), Gaps = 40/168 (23%) Query: 107 SFQLAVVGSRAHSWYG-------ERWGRLFCETLATRGV------------TITSGLARG 147 + V GS G R ++ RG I +G G Sbjct: 58 RSTIVVFGSARVREDGPPERARWYAEARRLGRIVSERGGAKHQNGDKVRDNVIATGGGPG 117 Query: 148 IDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFP-LDVPPLAY 206 + A++ A +V SI G N P + + ++ + Sbjct: 118 LMEAANRGAFEVGAPSI-----GFNITLPHEQVP-------------NPYCTPELTFRFH 159 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 F R ++ + ++V G+ L + A P PI Sbjct: 160 YFAMRKMHLAMRANALVVFPGGF--GTFDELFEILTLRQTDKAPPIPI 205 >UniRef50_D2R8B7 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8B7_9PLAN Length = 719 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 32/134 (23%) Query: 120 WYGERWGRLFCETLA-------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 + R ++ + +G GI A++ A V SI GLN Sbjct: 540 AHYYDDARELARIVSSSCQHESRCDYVVVTGGGPGIMEAANRGAFDVGAKSI-----GLN 594 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPP---LAYNFPRRNRIISGLSKGVLVVEAAL 229 P + + +F R +K ++V Sbjct: 595 ITLPHEQTP--------NAYITPQLCFQFRYFALRKMHFLMR-------AKALVVFPGGF 639 Query: 230 RSGSLVTARCALEQ 243 G+L L Sbjct: 640 --GTLDELFEVLTL 651 >UniRef50_A5E9I6 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5E9I6_BRASB Length = 150 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 41/142 (28%), Gaps = 35/142 (24%) Query: 107 SFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 S + +VGSR S F +L + SG A+G+D A +AA + ++ Sbjct: 5 SKVVGIVGSRHFPS---RALVESFVTSL-PCDTCVVSGGAQGVDTWAIEAARSLGLPTLI 60 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 + G P RN + + Sbjct: 61 IQA----------------DWKRHG--------------RKAGPLRNAELVRRVDEIAAF 90 Query: 226 EAALRSGSLVTARCALEQGREV 247 G+L T AL G V Sbjct: 91 WDGRSRGTLNTVMLALRAGLPV 112 >UniRef50_A7I2M0 Putative uncharacterized protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I2M0_CAMHC Length = 197 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 53/203 (26%), Gaps = 36/203 (17%) Query: 102 LHALHSFQLAVVGSRAHSWYG--ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV 159 + + + GS + LA G I +G + A+K A Sbjct: 16 IDFGNDKFVTFFGSARFDDENFFVKEAEKLAYKLAKAGFAIITGGGESVMKAANKGANLA 75 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 ++ G N + P + E F L +S Sbjct: 76 GRRNL-----GFNIVLPHEQHS-NEFIDES-------FVFSTFALRKYALM-------VS 115 Query: 220 KGVLVVEAALRSGSLVTARCALEQGRE------------VFALPGPIGNPGSEGPHWLIK 267 ++ G++ L + F LP S + IK Sbjct: 116 DFFVIFPGGF--GTMDEFFEILTLNQVKFKNNKIYLYNSKFWLPLIEFFRVSLLKNKTIK 173 Query: 268 QGAILVTEPEEILENLQFGLHWL 290 + + + + + +E++ + Sbjct: 174 ENDLKLFKISDDIEDIFADIKAS 196 >UniRef50_A2BXB7 Predicted dehydrogenase n=14 Tax=Cyanobacteria RepID=A2BXB7_PROM5 Length = 294 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 33/134 (24%), Gaps = 27/134 (20%) Query: 117 AHSWYGERWGRLFCETLA-------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 + S Y R + ++ I +G GI A++ A SI Sbjct: 119 SMSHY-YSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAANRGAFDAGCKSI----- 172 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 GLN P S + F R S+ + Sbjct: 173 GLNISLPNEQHPN------------SFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGF 220 Query: 230 RSGSLVTARCALEQ 243 G+L L Sbjct: 221 --GTLDELFELLTL 232 >UniRef50_B4CX49 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX49_9BACT Length = 245 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 34/182 (18%) Query: 109 QLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++ + GS + L G I +G G+ A++ A V Sbjct: 52 RVTIFGSARIKPGTPAYEGVKKLAAELVGLGCDILTGGGPGLMQAANEGAYS-------V 104 Query: 167 LGNGLNTIHPRRHARL-AASLLEQGGALVSEFPLDVPPLA-YNFPRRNRIISGLSKGVLV 224 GLN + L E + + ++F +I+ S +V Sbjct: 105 DATGLNRSI-GINVELPFEQ--EVNPFVSQAYGHRTFFSRLHHF-----MIA--SDAFVV 154 Query: 225 VEAALRSGSLVTARCALE--QGREVFALPGPIGNPGSE-------GPHWLIKQGAILVTE 275 V + G+L+ A + Q R+++ P + G ++ +G+ L + Sbjct: 155 VPGGI--GTLLEMSMAWQLLQVRKLYNTPLILVGKMWADLVDWGKGC--MLDEGSELASA 210 Query: 276 PE 277 + Sbjct: 211 AD 212 >UniRef50_Q6MA72 Putative uncharacterized protein n=2 Tax=Parachlamydiaceae RepID=Q6MA72_PARUW Length = 356 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 22/139 (15%) Query: 107 SFQLAVVGS-RAH-SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + ++++ GS R S + + F +A +G A GI + A + + Sbjct: 92 NKRISIFGSSRTPESHPDYQAAKFFGAAMADLNWVCITGAADGIMRAGLEGAEKESRF-- 149 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 GL+ P SLL L+ F R + S + Sbjct: 150 -----GLSIRLPFESPS--NSLLAGDPKLI---------NFRYFFTRKLMFLSHSDAIAA 193 Query: 225 VEAALRSGSLVTARCALEQ 243 + G+ L Sbjct: 194 FPGGV--GTQDELFEVLTL 210 >UniRef50_B5CTX3 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CTX3_9BACE Length = 79 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 26/73 (35%), Gaps = 2/73 (2%) Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEV--TPVDVVAERAGQPVPEVVTQLLELELAG 349 ++ +++ ++ ++ + + + + + L LE+ G Sbjct: 7 PVSPQVVQRQLFPELTPEEEQVITHLQKHPDGIQINTLVVESNIAINRMTSLLFNLEMKG 66 Query: 350 WIAAVPGGYVRLR 362 + A+ GG +L Sbjct: 67 VVRALAGGVYKLA 79 >UniRef50_A4SYK9 Putative uncharacterized protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYK9_POLSQ Length = 285 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 31/152 (20%) Query: 119 SWYGERWGRLFCETLATRGVT---------ITSGLARGIDGVAHKAALQVNGVSIAVLGN 169 S Y R F +A T I +G GI A++ A + +I Sbjct: 110 SAY-YESARDFGAIVAHYNATQDNKSNKLHICTGGGPGIMEAANRGAFEAGDQTI----- 163 Query: 170 GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 G N PR S + QG +S +F R ++ ++ Sbjct: 164 GFNISLPREQHP--NSYISQG---LSFRFHYFALRKMHFMLR-------ARAIVAYPGGF 211 Query: 230 RSGSLVTARCALE--QGREVFALPGPIGNPGS 259 GS L Q +V +P + G Sbjct: 212 --GSFDELFEVLTLMQTHKVLPIPVILVGAGY 241 >UniRef50_Q5HR58 Decarboxylase family protein n=7 Tax=Staphylococcus RepID=Q5HR58_STAEQ Length = 188 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 19/107 (17%) Query: 126 GRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAA 184 + +A +G + G + GI G L+ G +I V+ L+ Sbjct: 22 AYELGKYMAEQGYELVFGAGSVGIMGAIQDGILEHGGKAIGVMPKMLDE----------R 71 Query: 185 SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + Q VSE L + R ++ L+ ++ S Sbjct: 72 EITSQK---VSEL-----ILVDSMHERKNKMTELADAFIMAPGGAGS 110 >UniRef50_Q46GU3 Cyanobacteria-specific protein n=7 Tax=Cyanobacteria RepID=Q46GU3_PROMT Length = 172 Score = 51.5 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 107 SFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 ++A +GSR L +LA G +I + ++G++ +A L VN + V Sbjct: 30 KRRIAFLGSRHVPVVSIHIVELIARSLAQEGHSIITSGSQGVNAAVIRAVLDVNPSLLTV 89 Query: 167 -LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 L L+ L S+L L+ + + PL N+ I ++ Sbjct: 90 LLPQSLDRQT-AEVKDLLGSVLH----LIEKEDNNDLPLPMASSLCNQEIINRCDQLICF 144 Query: 226 EAALRSGS-LVTARCALEQGREV 247 A S + L + A + G+ V Sbjct: 145 -AFHDSETLLSSCHSAEDMGKVV 166 >UniRef50_P48636 UPF0717 protein PA4923 n=141 Tax=cellular organisms RepID=Y4923_PSEAE Length = 195 Score = 51.5 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 23/143 (16%) Query: 105 LHSFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNG 161 + + V S S + LA RG+T+ G A G+ G AAL G Sbjct: 1 MTLRSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGG 60 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 I ++ L + + G E + ++ L+ Sbjct: 61 EVIGIIP-----------QSLQEAEIGHKGLTRLEVVDGMHARKAR-------MAELADA 102 Query: 222 VLVVEAALRSGSLVTARCALEQG 244 + + L G+L G Sbjct: 103 FIALPGGL--GTLEELFEVWTWG 123 >UniRef50_C7HXM1 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=C7HXM1_THIIN Length = 331 Score = 51.1 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 42/154 (27%), Gaps = 34/154 (22%) Query: 117 AHSWYGERWGRLFCETL------ATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 S Y E R F + A + + +G GI ++ A + G SI G Sbjct: 138 EMSRYYEE-ARRFATLVTRATCDADEPLVVVTGGGPGIMEAGNRGAFEAQGKSI-----G 191 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPP---LAYNFPRRNRIISGLSKGVLVVEA 227 LN + + E +F R S ++ Sbjct: 192 LNIVLQHEQRP--------NPYITPELCFQFHYFALRKMHFLMR-------SVALVCFPG 236 Query: 228 ALRSGSLVTARC--ALEQGREVFALPGPIGNPGS 259 G+L L Q R+V P + Sbjct: 237 GF--GTLDELFEVLTLTQARKVRQRPIVLFGESF 268 >UniRef50_Q7NCS7 Gll2901 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCS7_GLOVI Length = 150 Score = 50.7 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 + S Q+A++GSR ++ + LA G I + A G + + ++ Sbjct: 3 IQQTASKQIAILGSRHVPLGHQQLIEILSYALALTGNRILTSGAAGTNQAVIRGVVRADP 62 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP-PLAYNFPRRNRIISGL 218 N +++ +L L+ PR +++ + E P + PL NR I Sbjct: 63 NALTV-ILPQSLDRQ-PRETRDQLENIIH-----LVEHPENNHMPLGEASVVCNREIIEK 115 Query: 219 SKGVLVVEAALRSGSLVTARCALEQGREV 247 ++ ++ L A E + V Sbjct: 116 AQQLICFAFHDSRVLLEGCEFAEELRKVV 144 >UniRef50_B4D8Z5 Putative uncharacterized protein n=2 Tax=Verrucomicrobia RepID=B4D8Z5_9BACT Length = 359 Score = 50.7 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 38/161 (23%), Gaps = 28/161 (17%) Query: 86 LLATTDYPGALFVEGELHALHSFQLAVVGSRA--HSWYGERWGRLFCETLATR-GVTITS 142 L H ++ V GS + F + G + Sbjct: 71 LKELRYAARVF-----TPYRHVHKVVVFGSARTKATEPEAVAAEEFARRMHEDLGYMTIT 125 Query: 143 GLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP 202 G GI G A + A + N GLN P A + L+ Sbjct: 126 GGGDGIMGAAQRGAGRENSF-------GLNIRLPFEQK--ANETIHGDQKLI-------- 168 Query: 203 PLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 F R + V + G++ L Sbjct: 169 -NFNYFFTRKLNFVKETHAVALFPGGF--GTMDEGFEVLTL 206 >UniRef50_B0PHI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHI5_9FIRM Length = 117 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 37/146 (25%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 ++A++GSR +G + + SG A GID +A AA ++ Sbjct: 2 RVAIIGSREIGPFG---TDDLIRHIPLNTSELVSGGAAGIDAMAEDAARRLGLP------ 52 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR-RNRIISGLSKGVLVVEA 227 ++ F D P RN I + VL Sbjct: 53 -------------------------MTVFRPDYEANGRLAPLIRNSRIVDYADLVLAFWD 87 Query: 228 ALRSGSLVTARCALEQGRE--VFALP 251 G+ T R +E G+ + ++P Sbjct: 88 GHSRGTAYTLRVCVEHGKPFRIISVP 113 >UniRef50_C7I5Z6 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5Z6_THIIN Length = 319 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 57/205 (27%), Gaps = 34/205 (16%) Query: 116 RAHSWYGERWGRLFCETLATR---GVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 R + G + + G+ + +G G A++ A + ++ GLN Sbjct: 131 RMALSRYYQIGFELGQMIGAARIPGLAVMTGGGPGGMEAANRGAFEAGAETL-----GLN 185 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 PR L + + F R + ++ + G Sbjct: 186 ISLPREQYP--------NPYLT----PGLCFQFHYFALRKLHFMQRAAAIVALPGGF--G 231 Query: 233 SLVTARCALE--QGREVFALP-GPIGNPGSEGPHW---------LIKQGAILVTEPEEIL 280 +L AL Q R+ +P IG G + ++ A L E+ Sbjct: 232 TLDELFGALTLIQTRKSAPIPIVLIGESYWRGVFNVDFLLEAGSIDEEDARLFWFAEDAR 291 Query: 281 ENLQFGLHWLPDAPENSFYSPDQQD 305 E + W S + Sbjct: 292 EAWEGICTWHARNGSPLEGSATESP 316 >UniRef50_UPI0001B4E173 Rossmann fold nucleotide-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4E173 Length = 186 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 23/130 (17%) Query: 123 ERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 +F + + G I G A G+ GV +AL G V+ Sbjct: 18 REAAAMFAKEMVAAGHEIVYGGGAAGLMGVVADSALAAGGRVTGVMPT-----------H 66 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L + + G +E + +R ++++ L+ + + + + + A Sbjct: 67 LVDAEVAHRGL--TELH-----VVDTMHQRKQLMADLADAFIALPGGVGTAEEILEVWAW 119 Query: 242 ----EQGREV 247 + V Sbjct: 120 LVLGTHKKPV 129 >UniRef50_Q1LNX6 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LNX6_RALME Length = 288 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 37/128 (28%), Gaps = 26/128 (20%) Query: 123 ERWGRLFCETLA-------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R F ++ R + +G GI A++ A +V SI GLN Sbjct: 111 YEQARRFSGLISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSI-----GLNITL 165 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P A D+ + F R +KG++ R +L Sbjct: 166 PHEQAP--------NPY----MCPDLAFRFHYFALRKMHFLLHAKGLVAFPGGYR--TLD 211 Query: 236 TARCALEQ 243 L Sbjct: 212 ELFEVLTL 219 >UniRef50_P74478 Slr1926 protein n=15 Tax=Cyanobacteria RepID=P74478_SYNY3 Length = 223 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 8/148 (5%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 + S ++A++GSR ++ + L G + + A G + K A++ Sbjct: 76 IQQTGSKRIALLGSRHVPITHQQLIEMMSYALVLGGNHLVTSGATGTNSAVIKGAMRADP 135 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 N +++ +L L+ PR ++ LV D L NR I Sbjct: 136 NLLTV-ILPQSLDRQ-PRESRNQLGQVVH----LVENTENDSLSLGEASTICNREIVSRC 189 Query: 220 KGVLVVEAALRSGSLVTARCALEQGREV 247 + ++ L T A EQ + V Sbjct: 190 QQLICFAFHESHTLLQTCAEAEEQRKLV 217 >UniRef50_Q54UC5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54UC5_DICDI Length = 200 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 53/201 (26%), Gaps = 35/201 (17%) Query: 110 LAVVGSRAHSWY-GERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVL 167 GSR + + + + +A R + G GI G + G ++ Sbjct: 11 CVFCGSRKGNDEVYIQVTEVLAKEMAKRNYGLIYGGGNIGIMGAVSQGVQNAGGRVKGII 70 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 L+ P+ +S + + R I+ S+ + + Sbjct: 71 PRSLS---PKE---------------ISGVTVGEVVFVDDMHTRKEIMYNSSEAFIALPG 112 Query: 228 ALRSGSLVTARCALEQG------REVFAL-------PGPIGNPGSEGPHWLIKQGAILVT 274 + G+ + + V L P S G ++ A + Sbjct: 113 GM--GTFEELFECITWNQLGIHSKPVGILNINGYYDPLVALLKTSVGSGFVDSDFAKSII 170 Query: 275 EPEEILENLQFGLHWLPDAPE 295 + +E L + Sbjct: 171 VSSDPIELLNKLESTPSYKSQ 191 >UniRef50_A1SC37 Putative Rossmann-fold nucleotide-binding protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SC37_NOCSJ Length = 94 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Query: 234 LVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQG-AILVTEPEEILENL--QFGLHWL 290 + TA R V ALPGP+ + S G H LI+ G A +VT EIL +L + Sbjct: 1 MNTAHWTTNLHRPVLALPGPVTSVASAGVHQLIRLGEASMVTNAPEILNDLIGRPAATAA 60 Query: 291 PDAPENSFYSPDQQDVALPF 310 A + Y+P Sbjct: 61 RSAQVDESYAPSPARHTPAP 80 >UniRef50_C8P2G7 Decarboxylase family protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2G7_ERYRH Length = 183 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 31/205 (15%) Query: 106 HSFQLAVVGSRAHS-WYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVS 163 GS+ + + + G A+ GI G+ LQ +G Sbjct: 1 MKRIAVFCGSKMPELPIYREEAVRLATYFSNNDIQLIYGGAKVGIMGLIADTMLQNDGYV 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I V+ LA + G SE L + R ++ ++ G + Sbjct: 61 IGVMP-----------KVLAEKEILHEGL--SE-----SILVKDMHERKALMMDMADGFI 102 Query: 224 VVEAALRSGSL------VTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 G++ +T + L I + +G + A + + Sbjct: 103 AFPGG--CGTMEEIFEVITWNQIGIHNKPYGFL--NI-DHYYDGIKTYLDHAAHIGFSTQ 157 Query: 278 EILENLQFGLHWLPDAPENSFYSPD 302 + ++++ F + + D Sbjct: 158 QQIDHIIFEPRFDDFIYKMESRFSD 182 >UniRef50_C0VRT6 Putative uncharacterized protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VRT6_9CORY Length = 329 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 64/193 (33%), Gaps = 40/193 (20%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 GSR ++Y + R E LA RG+ + G + G+ G AL G V+ Sbjct: 155 GSR--TFY-QDVARELGEQLADRGIKVVYGGGSAGLMGEMASGALAHGGDVHGVMA---- 207 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 LA G + + + P R + L+ G L + + G Sbjct: 208 -------RDLADREQAYEGL------PQLDIV-DSIPERIARMEELADGFLALPGGV--G 251 Query: 233 SLVTARCALE------QGREV--FALPGP-------IGNPGSEG-PHWLIKQGAILVTEP 276 +L AL + V F + G + N SEG I+V Sbjct: 252 TLSELFDALTNQQIGSHQKPVILFNVEGYWNPLVTLLENTISEGFTQKKYVDALIVVETV 311 Query: 277 EEILENLQFGLHW 289 E++E L+ Sbjct: 312 AELVEKLESWRAP 324 >UniRef50_C0YVC1 Rossmann fold nucleotide-binding protein n=4 Tax=Bacteria RepID=C0YVC1_9FLAO Length = 250 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 57/196 (29%), Gaps = 29/196 (14%) Query: 108 FQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 +++ GS E + G I +G GI +K A G SI Sbjct: 62 PCVSIFGSARLKPENKYYEMAVDIAEKITKLGFGIITGGGPGIMEAGNKGAFNAKGKSI- 120 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 GLN P + + F R + S+G +V+ Sbjct: 121 ----GLNIDLPFEQH--FNPYINKS----------YSMNFDYFFVRKVMFVKYSQGFVVM 164 Query: 226 EAALRSGSLVTARCA--LEQGREVFALP-GPIGNPGSEGPHWLIKQGAILVTE---PEEI 279 G+L A L Q ++ P +G+ G K A L+ E E+ Sbjct: 165 PGGF--GTLDELTEAMTLIQTNKIGKFPIVLVGSEFWGGLLDWFK--ATLLKEGMIAEDD 220 Query: 280 LENLQFGLHWLPDAPE 295 L+ + Sbjct: 221 LDLYRVVDSADEAVAH 236 >UniRef50_D2LHD4 Putative uncharacterized protein n=2 Tax=Bacteria RepID=D2LHD4_RHOVA Length = 193 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 30/143 (20%) Query: 106 HSFQLAVVGS-RAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVS 163 GS R R LA + + G A G+ G+ A ++ G Sbjct: 1 MKRLCVFCGSSRGADPAYAEAARQLGAALAEADIGLVYGGAAVGLMGILADACMEAGGTV 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGA----LVSEFPLDVPPLAYNFPRRNRIISGLS 219 V+ L + G +VS + R +++ LS Sbjct: 61 TGVIP-----------EALIRKEVGHAGLSDLRIVS-----------SMHERKALMAELS 98 Query: 220 KGVLVVEAALRSGSLVTARCALE 242 G + + + G+L Sbjct: 99 DGFVALPGGI--GTLEEIFEVWT 119 >UniRef50_Q31PX5 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=Q31PX5_SYNE7 Length = 172 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 + S ++A++GSR + + L G + + A+G + + A++ Sbjct: 25 IQQTSSKRVAILGSRHVPITHQHLIEMMSYALVLAGNRLMTSGAQGTNAAVIRGAMRADP 84 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLL------EQGGALVSEFPLDVPPLAYNFPRRNR 213 N +++ +L L+ PR ++ E ++E N+ Sbjct: 85 NLLTV-ILPQSLDRQ-PRESREQLEKVIHLVEHAENDHLSLAEAST----------LCNQ 132 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQGREV 247 I + ++ L T R A +Q V Sbjct: 133 AIVTRCQQLICFAFHDSHTLLETCRYAEDQHHLV 166 >UniRef50_A8J3N4 Predicted protein n=12 Tax=cellular organisms RepID=A8J3N4_CHLRE Length = 245 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 11/144 (7%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV---SI 164 L G+R ++ + A+ G I + A G + K AL+ N ++ Sbjct: 103 KNLGFFGTRNMGVTHQKLVEILAYAYASTGNHIFTSGATGTNAAVIKGALRANCPDKLTV 162 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVP-PLAYNFPRRNRIISGLSKGVL 223 +L L+ P L + + + E P + PL NR I + V+ Sbjct: 163 -LLPQSLSKQ-PYESQELLSQVAN-----LQEMPQNDHLPLMEASRICNRKIISHIQQVV 215 Query: 224 VVEAALRSGSLVTARCALEQGREV 247 L T + A E + V Sbjct: 216 CFAFHDSRLLLETCQEAKEMKKIV 239 >UniRef50_A1SPW3 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SPW3_NOCSJ Length = 156 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 1/68 (1%) Query: 103 HALHSFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 +L +AVVG LA G + +G G+ G A + A G Sbjct: 1 MSLTRRYVAVVGPADGARPTDLEHAEAVGRMLAEHGAIVLTGGHHGVMGAAARGARTGGG 60 Query: 162 VSIAVLGN 169 +I ++ Sbjct: 61 TAIGLMPG 68 >UniRef50_C9RVN4 Putative uncharacterized protein n=2 Tax=Geobacillus RepID=C9RVN4_GEOSY Length = 185 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 21/128 (16%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S + + LA G+T+ G + G+ G +AAL+ G + V+ Sbjct: 15 SQKYKEAAKALGTFLARSGMTLIYGGGKRGLMGEVAEAALRHQGRVVGVIP--------- 65 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L + G SE + R + + G + + G+ Sbjct: 66 --QFLKDREVAHDGL--SELL-----VVDTMHTRKAKMYESADGFIALPGGY--GTYEEL 114 Query: 238 RCALEQGR 245 L R Sbjct: 115 FEVLSWSR 122 >UniRef50_Q169F1 Decarboxylase, putative n=15 Tax=Rhodobacterales RepID=Q169F1_ROSDO Length = 188 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 29/155 (18%) Query: 103 HALHSFQLAV-VGSRAHS-WYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQV 159 + + V GSR + + + +A G + G G+ G +AA + Sbjct: 1 MPMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEA 60 Query: 160 NGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLS 219 + V+ L L +++E R +++ Sbjct: 61 GADTFGVIPQ-LLVDWEIGKTDLTT-------YVITE----------TMHERKKVMFMNC 102 Query: 220 KGVLVVEAALRSGSLVTARCALE------QGREVF 248 V+V+ GSL AL + +F Sbjct: 103 DAVVVLPGGA--GSLDEMFEALTWRQLGLHQKPIF 135 >UniRef50_C5CUJ9 Putative uncharacterized protein n=12 Tax=cellular organisms RepID=C5CUJ9_VARPS Length = 297 Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 35/154 (22%) Query: 119 SWYGERWGRLFCETLAT--------RGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNG 170 S + R F + +A + + +G GI A++ A + G+S+ G Sbjct: 123 SSHYYEKARAFGKLVAEFSNGKEPEDKLFVCTGGGPGIMQAANRGAHEGGGLSV-----G 177 Query: 171 LNTIHPRRHARLAASLLEQGGAL---VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 L P E + +S +F R +K ++ Sbjct: 178 LAIALPME--------EEANPYVTPALSFKFHYFAIRKMHFMMR-------AKALVAFPG 222 Query: 228 ALRSGSLVTARC--ALEQGREVFALPGPIGNPGS 259 G+L L Q R+ +P + Sbjct: 223 GF--GTLDELFEVITLVQTRKSKPVPIVLFGSAY 254 >UniRef50_C9Y9F3 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9F3_9BURK Length = 159 Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 32/146 (21%) Query: 112 VVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 ++GS +A G+T+ SG A + A+ G ++++ G Sbjct: 1 MLGSAEPGSAAYALAGEAGRLMAGLGITVVSGCGSPATRHAAECAVAAGGQVLSIIPEG- 59 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP-----RRNRIISGLSKGVLVVE 226 E P P P RN +++ LV+ Sbjct: 60 ------------------------EMPPPDWPATVVVPSGVGDARNLLMALAGDACLVIG 95 Query: 227 AALRSGSLVTARCALEQGREVFALPG 252 R+G++ A R + L G Sbjct: 96 G--RAGTISEVCLAWLHKRPLLPLTG 119 >UniRef50_Q2N8C1 Decarboxylase family protein n=6 Tax=Sphingomonadales RepID=Q2N8C1_ERYLH Length = 193 Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 22/130 (16%) Query: 114 GSRAHS-WYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGL 171 GS R LA R + + G + G+ G AA + G I V+ L Sbjct: 9 GSATPDDPRYIELAREVGAGLAERDIGVVYGGGKLGLMGAVANAAKEAGGEVIGVIPEAL 68 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 ++ +A ++ L++ R + + LS G + + + Sbjct: 69 ------VNSEVANHNCDE---LIT---------VSGMHERKQKFTDLSDGFVTIPGGV-- 108 Query: 232 GSLVTARCAL 241 G++ A+ Sbjct: 109 GTMDELWEAM 118 >UniRef50_C2G1A9 Lysine decarboxylase n=3 Tax=Bacteria RepID=C2G1A9_9SPHI Length = 229 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 27/148 (18%) Query: 102 LHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQ 158 ++ +A+ + + + LA G+ I G G+ G AL Sbjct: 32 INFKTMKSVAIFCASSPGFDEDYMNSAYFAGQKLADEGLRIVYGGGHVGLMGAVANGALA 91 Query: 159 VNGVSIAVLGNGLNTIHPRRHARLAASLLEQG--GALVSEFPLDVPPLAYNFPRRNRIIS 216 G I V+ + LN+ + +G V E + R ++++ Sbjct: 92 QGGEVIGVIPDFLNS----------KEIGHKGVTQLHVVE----------SMHERKQMMN 131 Query: 217 GLSKGVLVVEAALRSGSLVTARCALEQG 244 LS GV+ + G++ + G Sbjct: 132 DLSDGVITLPGGF--GTMEELFEMITWG 157 >UniRef50_B9DK81 Lysine decarboxlyase family protein n=57 Tax=Staphylococcus RepID=B9DK81_STACT Length = 190 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 127 RLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAAS 185 + +A G + G + GI G L G +I V+ L+ Sbjct: 25 YELGKYMAEHGYELVFGAGSVGIMGAIQNGVLDHGGSAIGVMPRSLDD----------KE 74 Query: 186 LLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + Q ++E L + R +S L+ ++ S Sbjct: 75 ITSQR---LTEL-----VLVDSLHGRKAKMSELADAFILAPGGAGS 112 >UniRef50_Q7NK74 Glr1604 protein n=8 Tax=Cyanobacteria RepID=Q7NK74_GLOVI Length = 364 Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 37/140 (26%), Gaps = 22/140 (15%) Query: 106 HSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + ++A+ GS R F + RG + +G G+ + A Sbjct: 75 NRRKVAIFGSSRTGPGTAIFEHARAFAHRVVERGFMVVTGAGGGVMEAGNAGASTEESF- 133 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 GLN P A ++ L+ F R + G Sbjct: 134 ------GLNISLPFEQG--ANPHIDGDAKLI---------HFKYFFTRKLFFVRETDGFA 176 Query: 224 VVEAALRSGSLVTARCALEQ 243 + L G+ L Sbjct: 177 LFPGGL--GTQDECFEVLTL 194 >UniRef50_D2BNX7 Lysine decarboxylase family protein n=4 Tax=Lactococcus lactis RepID=D2BNX7_LACLK Length = 184 Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 37/183 (20%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + + LA G T+ G + G G+ A ++ G IAV +G+ + P Sbjct: 14 NPIYKDTSEKLGILLAKSGHTLVYGGSEEGCMGMVSDAVIRHQGKVIAVYPDGILPLEPP 73 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 R S+ L R R + L + +++ G++ + Sbjct: 74 RQNA-------------SQLYLTSGMD-----ERKRKLIDLGEAFVILAGGF--GTMEES 113 Query: 238 RCALEQ-------GREVFALPGPIGNPGSEGPHWLIKQGAI---------LVTEPEEILE 281 L + R V + P + +K+G I LV EE +E Sbjct: 114 FQLLTEMSINQTAVRPVIFVGRKFYQPLFDLLRLQLKEGMISKEVIDAISLVDTAEETIE 173 Query: 282 NLQ 284 L Sbjct: 174 LLG 176 >UniRef50_C3RRF1 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RRF1_9MOLU Length = 82 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%) Query: 34 IDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYP 93 + L+ G + + + +I+ + + I + YP L P Sbjct: 9 LYYFALKYNGDFDKIYSSLRTREKFNIDEFIRLKIDIQYQHITILDDKYPNYLKGVESPP 68 Query: 94 GALFVEGELHA 104 ALF EG L+ Sbjct: 69 FALFYEGNLNL 79 >UniRef50_D1NXH0 Decarboxylase family protein n=8 Tax=Bacteria RepID=D1NXH0_9ENTR Length = 191 Score = 48.0 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 20/118 (16%) Query: 114 GSRAHSWYGERW-GRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGL 171 GS S + F + + R +T+ G A GI G+ L + G +I V+ + L Sbjct: 12 GSSLGSNEIYKNQAIEFAKEMVKRDITLVYGGASVGIMGIVADTVLSLGGKAIGVIPSLL 71 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 + + +SE R + L+ + + Sbjct: 72 EQ----------REISHKN---LSELY-----RVETMHERKSKMIELADAFVAMPGGY 111 >UniRef50_P46378 UPF0717 protein ORF6 in fasciation locus n=2 Tax=Actinomycetales RepID=FAS6_RHOFA Length = 198 Score = 48.0 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 21/125 (16%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + YG + +A + + G AR G+ G AAL G + V+ I Sbjct: 34 TKYG-QLAEGMGRAIARSKLRLVYGGARVGLMGTLANAALDSGGTVVGVIPESFTAIPEA 92 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 H L +E + ++ +R +++ L + + + G+ Sbjct: 93 AHHGL------------TELH-----VVHDMHQRKALMAELGDAFIALPGGV--GTAEEF 133 Query: 238 RCALE 242 L Sbjct: 134 FEVLT 138 >UniRef50_B6YWI1 Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWI1_THEON Length = 315 Score = 48.0 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Query: 294 PENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + + + +++A + + +AE+ G +V L E+E G I Sbjct: 243 YNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLITR 302 Query: 354 V-PGGYVRL 361 V G R+ Sbjct: 303 VKEGRTYRI 311 >UniRef50_A7ZEK2 Putative uncharacterized protein n=1 Tax=Campylobacter concisus 13826 RepID=A7ZEK2_CAMC1 Length = 196 Score = 48.0 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 47/180 (26%), Gaps = 32/180 (17%) Query: 107 SFQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQ-VNGVS 163 + + GS + L G I +G GI A+K A S Sbjct: 19 NKNVTFFGSARFDEENFYCKKAYELAYKLNELGFAILTGGGDGIMRAANKGAFDSAKSPS 78 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 +A LN P + +++ N R ++ S + Sbjct: 79 VA-----LNVRLPFEQ--------NTNPYVTAKYLF------SNLSPRKFALTDSSIAFV 119 Query: 224 VVEAALRSGSLVTARCALEQ-----GREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEE 278 V G+L L + L G +G I++ I E Sbjct: 120 VFPGGF--GTLDELFEILVLAHVGSKKVKIFLYGC---EFWQGLDEFIRKTLIPQKTINE 174 >UniRef50_A9ASP6 Predicted Rossmann fold nucleotide-binding protein n=41 Tax=Proteobacteria RepID=A9ASP6_BURM1 Length = 342 Score = 48.0 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 31/170 (18%) Query: 101 ELHALHSFQLAVVGSRAH--SWYGERWGRLFCETLATRG-------VTITSGLARGIDGV 151 H + + SR S Y R R F +A + I +G GI Sbjct: 132 RPHDASRRRAVAIASRLVEQSAY-YRVAREFGRIVAHADRCTRTARLAIVTGGGPGIMEA 190 Query: 152 AHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRR 211 A++ A + SI G N PR+ A + D+ + F R Sbjct: 191 ANRGAYERGAPSI-----GFNIELPRQQAP--------NPYIT----PDLCLRFHYFAIR 233 Query: 212 NRIISGLSKGVLVVEAALRSGSLVTARCALE--QGREVFALPGPIGNPGS 259 + +K + G+ L Q R++ LP + Sbjct: 234 KLHLLERAKAAVFFPGGY--GTFDELFEVLTLLQTRKIAPLPVILVGEAY 281 >UniRef50_A7KVA9 Putative uncharacterized protein ORF097 n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KVA9_9CAUD Length = 188 Score = 47.6 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 37/127 (29%), Gaps = 14/127 (11%) Query: 123 ERWGRLFCETLATR-GVTITSGLARGIDGVAHKAALQVNGV----S--IAVLGNGLNTIH 175 + +G A G+D A + ++ + + IAV G Sbjct: 38 IWLTKKILAYCKKYPNAHFITGGALGVDTWAAEIVIEARKLYPDITLEIAVPHEGHGNKW 97 Query: 176 PRRHARLAASLLEQGGAL--VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + + + + VS + P RN + + ++ V SG+ Sbjct: 98 RPEARKHYKWIKSKADVVTMVS----NQPFTMRCMQARNEYMVDNATAIIGVWNG-SSGT 152 Query: 234 LVTARCA 240 + A Sbjct: 153 TNCLKYA 159 >UniRef50_P47044 UPF0717 protein YJL055W n=12 Tax=Saccharomycetales RepID=YJF5_YEAST Length = 245 Score = 47.6 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 22/174 (12%) Query: 124 RWGRLFCETLATRGVTIT-SGLARGIDGVAHKAAL--QVNGVSIAVLGNGL------NTI 174 G + G G+ G ++ + ++G ++ N L + Sbjct: 37 ESAEELGALFHKLGWKLVYGGGTTGLMGKIARSTMGPDLSGQVHGIIPNALVSKERTDED 96 Query: 175 HPRRHARLAASLLEQGGAL-VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + L S+ GA +SE + + R R+++ LS + + G+ Sbjct: 97 KEDVNKALLESVENHKGATPISEEYGETTIVPDM-HTRKRMMANLSDAFVAMPGGY--GT 153 Query: 234 LVTARCALE------QGREV--FALPGPIGNPGSEGPHWLIKQGAILVTEPEEI 279 + + + F + G + E I++ I V E I Sbjct: 154 FEEIMECITWSQLGIHNKPIILFNIDG-FYDKLLEFLKHSIQERFISVKNGEII 206 >UniRef50_D1PQA8 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQA8_9FIRM Length = 168 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 21/165 (12%) Query: 103 HALHSFQLAVVGSRAHSWYGERWGRLFCETL--------ATRGV-TITSGLARGIDGVAH 153 + + ++ G R + L G+ T +G+ARG D A Sbjct: 6 NEMRRYRCCFTGHR---PEKLGVTEEKVKMLLSSAVDDAIEGGISTFITGMARGFDLWAA 62 Query: 154 KAALQVN---GVSIAVLGN---GLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYN 207 + LQ + G + L + + + V + Sbjct: 63 EMVLQKKERYKQIHLICATPFPGFERSWQEKWRLLYSKIAREADLRV---AISDRYYRGC 119 Query: 208 FPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252 F +RN + S V+ G+ T A G EV + G Sbjct: 120 FQKRNEWMVRHSMLVIAAYNGQPGGTRNTMDFAERCGVEVRNILG 164 >UniRef50_A5Z4Y1 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4Y1_9FIRM Length = 169 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 27/165 (16%) Query: 105 LHSFQLAVVGSRA-HSWYGERWGRLFCETL---ATRGVT-ITSGLARGIDGVAHKAALQV 159 + V G R + + T G T S A G+D + L+ Sbjct: 1 MKGKTCCVTGHRDLPQNEINKIKAALEHEIDAAVTDGFTCFMSSFADGVDQYFAELVLER 60 Query: 160 NGVS-----IAVLG-----NGLNTIHPRRHARLAASLLEQGGALVSE-FPLDVPPLAYNF 208 + IAV+ + LN R L + + ++ E + V + Sbjct: 61 KQTNPALELIAVIPYRKRLDSLNKK--TRTRELLEACADV--VVIQEKYLPSV------Y 110 Query: 209 PRRNRIISGLSKGVLVV-EAALRSGSLVTARCALEQGREVFALPG 252 RNR + S V+ V + G+ T R +E+ +P Sbjct: 111 SHRNRYMVEHSDRVIAVYDGRETGGTAKTIRFTHRMKKELREIPV 155 >UniRef50_O06986 UPF0717 protein yvdD n=96 Tax=Firmicutes RepID=YVDD_BACSU Length = 191 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 23/137 (16%) Query: 108 FQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSI 164 + V + +R +A +G+ + G +R G+ G A ++ G +I Sbjct: 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAI 61 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 V+ +GL H L L+E G R +S L+ G + Sbjct: 62 GVMPSGL-FSGEVVHQNL-TELIEVNG----------------MHERKAKMSELADGFIS 103 Query: 225 VEAALRSGSLVTARCAL 241 + G+ L Sbjct: 104 MPGGF--GTYEELFEVL 118 >UniRef50_B3EQJ1 Putative uncharacterized protein n=2 Tax=Chlorobiaceae RepID=B3EQJ1_CHLPB Length = 178 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 21/129 (16%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNT 173 S + LA R +T+ G G+ G A ++ G ++ Sbjct: 12 SSQCPKEYFDAAAELGKALAERAITLVFGGGNVGLMGCIANAVMRNGGAVKGIMP----- 66 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 L + G ++E + R +++ L+ +V+ G+ Sbjct: 67 ------RFLEEREIAHSG--ITELHI-----VDTMHERKMMLAELADAFIVLPGGF--GT 111 Query: 234 LVTARCALE 242 L L Sbjct: 112 LDELVEVLT 120 >UniRef50_B1XPM0 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XPM0_SYNP2 Length = 119 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 22/100 (22%) Query: 149 DGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNF 208 A + A G+++ +L + H LA S+ D+ Sbjct: 1 MAAASQGAKVAGGLTVGILPG-------KNHQGLADSV-------------DIAICTDLG 40 Query: 209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 RN + + V+ V + L G++ AL+ + V Sbjct: 41 HGRNNVNVLSADVVVAVGSGL--GTVSEIALALKNHKPVI 78 >UniRef50_D1PRT2 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT2_9FIRM Length = 168 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 14/150 (9%) Query: 105 LHSFQLAVVGSRAHSWYGER--WGRLF--CETLATRGVTIT-SGLARGIDGVAHKAALQV 159 + + G R + +L ++L G +G A G D +A +A L++ Sbjct: 11 MREKTVCFTGHRIIEPEKRASLFAQLIDEIKSLLEAGYRYFGAGGALGFDTLAAQAVLKL 70 Query: 160 -----NGVSIAVLGNGLN-TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNR 213 I VL P + +L Q +V +RNR Sbjct: 71 REEYPQIRLILVLPCKEQTRGWPAADVDIYNEILHQADKVV---YTAEHYYRGCMFKRNR 127 Query: 214 IISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + S + + G+ T R A Q Sbjct: 128 HLVDNSSVCICYLTSDHGGTAYTVRYAQSQ 157 >UniRef50_C3RB76 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=C3RB76_9BACE Length = 179 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 50/152 (32%), Gaps = 19/152 (12%) Query: 107 SFQLAVVGSRAHS----WYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNG 161 S LA G R G+T SG+A G D +A + L + G Sbjct: 26 SKSLAFTGHRTIPIERQDEIRARLVEAVSVACKSGITCFYSGMAMGFDLMAAETVLSLKG 85 Query: 162 -----VSIAVLGNGLNTI-HPRRHARLAASLLEQ--GGALVSEFPLDVPPLAYNFPRRNR 213 IAV+ P ++ Q ++SE+ RRN Sbjct: 86 RYPDIRLIAVVPFRRQNCRWPSIEKERYQKIISQADRVIVLSEYYF-----KGCLLRRND 140 Query: 214 IISGLSKGVLVV-EAALRSGSLVTARCALEQG 244 + S GV+ + G+ T R A ++G Sbjct: 141 FMLEHSCGVIAFYDGKPYGGTFYTCREAGKRG 172 >UniRef50_C6XHN5 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHN5_LIBAP Length = 95 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 + ++ + +D + G P V LLEL+LAG + P G V L Sbjct: 35 ERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSL 87 >UniRef50_Q2NG57 Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NG57_METST Length = 178 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 29/143 (20%) Query: 109 QLAVVGSRAHS--WYGERWGRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIA 165 ++ + GS ++S + G + +A++ T+ G G+ G K +G I Sbjct: 2 KICLYGSASNSINKTYKEVGYDLGKEIASKNHTLVFGSGNHGMMGSVAKGVYANHGKIIG 61 Query: 166 VLG---NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 + + I+P + +SE R R+ S Sbjct: 62 IAPEWMHEFEEIYPHCNKIFYTK-------SMSE--------------RKRLFLVKSDAF 100 Query: 223 LVVEAALRSGSLVTARCALEQGR 245 +V + G+L + + Sbjct: 101 IVTPGGI--GTLDEFFEIITLKK 121 >UniRef50_D2TYA6 Lysine decarboxylase n=4 Tax=Enterobacteriaceae RepID=D2TYA6_9ENTR Length = 193 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 24/133 (18%) Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGL 171 VG S ++ L R +T+ G R GI GV + L+ G I V+ Sbjct: 15 VG---ASGIYQQQAVALASELVNRKITLVYGGGRVGIMGVLANSILEQGGQVIGVMP--- 68 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 L + G S + +D +R + + L+ G + + Sbjct: 69 --------KLLVEREISHTGLTKS-YIVDT------MHQRKQKMIDLADGFIALPGGF-- 111 Query: 232 GSLVTARCALEQG 244 G+L G Sbjct: 112 GTLEEFSEVFTWG 124 >UniRef50_A8RVS6 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=A8RVS6_9CLOT Length = 180 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 18/118 (15%) Query: 143 GLARGIDGVAHKAALQVNGVS-------IAVLGN-GLNTIHPRRHARLAASLL--EQGGA 192 G A G+D A + L + + I V+ G ++ P + L+ Sbjct: 53 GGALGVDMWAGEQLLTLRAQTGYEDIKIIVVIPFIGYDSKWPDQSRHRLKKLIQNANDSI 112 Query: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV---EAALRSGSLVTARCALEQGREV 247 ++S ++ +RN + ++ ++ V + LRSG+ T AL G+ + Sbjct: 113 VIS-----HSADVSSYKKRNYYMVDHAEYIIGVFDNQKKLRSGTAQTVNYALRNGKAI 165 >UniRef50_Q0KCV4 Predicted Rossmann fold nucleotide-binding protein / Lysine decarboxylase family protein n=5 Tax=Bacteria RepID=Q0KCV4_RALEH Length = 197 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 24/127 (18%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 G+R RL TLA G+ + G + G+ G+ A ++ G +I ++ + Sbjct: 13 GNR---PEYAEGARLLGRTLAESGLALVYGGGKVGLMGIVADAVMEHGGSAIGIIPD--- 66 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 L + G +E + N R ++++ + + + + G Sbjct: 67 --------ALMQKEVGHRGL--TELH-----VVRNMHERKQMMADRADAFIAMPGGV--G 109 Query: 233 SLVTARC 239 + Sbjct: 110 TFEELFE 116 >UniRef50_B0KVB7 Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB7_9BACT Length = 422 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 25/181 (13%) Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 Y + + LA G I +G G+ + + A + VL + P+RH Sbjct: 256 PYIQ--AKETARLLAENGYGIVNGGGPGVMRASTEGAHEGGA---GVLAVTYHPNKPKRH 310 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 E D+ ++ R +I+ S ++ ++ + S Sbjct: 311 FEGTDP----------ENHFDLEVKTLDYFDRTKILLQTSDIHVIFRGSIGTLSEFGMSW 360 Query: 240 ALEQGREVFALPGPIGNPGSEGPHWLIKQGA----------ILVTEPEEILENLQFGLHW 289 E P + G I++ + T P+E+LE ++ + Sbjct: 361 ENSYIHEPNNKPIILFGDHWRGILKSIEENMSVRGGETEIIKICTTPQEVLEYIKSIENK 420 Query: 290 L 290 L Sbjct: 421 L 421 >UniRef50_Q1D3Q8 Putative molybdenum cofactor carrier protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D3Q8_MYXXD Length = 183 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 35/166 (21%) Query: 106 HSFQLAVVGSRAHSWYGERWGRL---FCETLATRGVTITSGLARGIDGVAHKAALQV--- 159 + V GS E +A G + +G G+ A A +QV Sbjct: 4 PRRIIGVFGSGK-----EDHAERVIPLVRWIAEAGFDLLTGAGSGVMRTAADAFVQVAYR 58 Query: 160 NGVSIAVLGNGLN-------TIHPRRHARL--AASLLEQGGALVSEFPLDVPPLAYNFPR 210 +G+SI ++ + + +P + L L G P Sbjct: 59 HGISIGIVPGTVEGGEYRPRSGYPNPNVELPIYTHLPLSG-------EQGTEP-----LS 106 Query: 211 RNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGN 256 RN I ++ + G++ A AL G+ V L GP + Sbjct: 107 RNHINVLTPHALVSLPGGA--GTVAEAVLALRYGKPVI-LYGPPES 149 >UniRef50_O34359 Uncharacterized SPBc2 prophage-derived protein yoqJ n=3 Tax=root RepID=YOQJ_BACSU Length = 171 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 21/137 (15%) Query: 123 ERWGRLFCETLATRGVTITSGLARGIDGVAHK--AALQVNGVSIA-VLGNGL---NTIHP 176 +G A G D A L+ I ++ + + Sbjct: 14 LAVIEELITK--ENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIATPFKEQDKVWS 71 Query: 177 RRHARLAASLLEQGGALVS-----------EFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 +L +++ E P + P +RN + S+ ++ V Sbjct: 72 ADQKMWYKRMLNVADEIINVEELDKYKVSGEKPGEFSPAKMQ--KRNEYMIDHSEAIVAV 129 Query: 226 EAALRSGSLVTARCALE 242 +SG+ A + Sbjct: 130 YDGSKSGTRNCLNYAKK 146 >UniRef50_A8SHQ2 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHQ2_9FIRM Length = 143 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 17/122 (13%) Query: 143 GLARGIDGVAHKAALQVNGVS-------IAVLG-NGLNTIHPRRHARLAASLLEQGG-AL 193 G A G+D A + L++ + I L G + + + +++ + Sbjct: 20 GGALGVDMWAAEEILRLKEQTGYADIELIVALPFEGHDLKWDAVNRQRLQTIIHNAAKCV 79 Query: 194 VSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA---ALRSGSLVTARCALEQG-REVFA 249 V + A ++ +RN + + +L V +RSG+ T AL+Q R +F Sbjct: 80 V----VGQNGDASDYKKRNYYMVDHADFLLAVYDNDRKIRSGTGQTVNYALKQNLRIIFL 135 Query: 250 LP 251 P Sbjct: 136 HP 137 >UniRef50_A7HLI5 Putative uncharacterized protein n=12 Tax=Thermotogaceae RepID=A7HLI5_FERNB Length = 181 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 59/185 (31%), Gaps = 38/185 (20%) Query: 114 GSRAHSW--YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG-NG 170 GS S E E L R + +G G+ + K VNG S+ VL G Sbjct: 20 GSINESPVKELENICVKLGEELGKR-YVVFTGGRDGVMELVCKGVANVNGFSVGVLPWEG 78 Query: 171 LNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALR 230 ++ E ++S +F R+ I+ V+ + + Sbjct: 79 SDS-------------NEYNSLVIS--------TGLDFQMRSFILVKSVDVVVSIGGEIG 117 Query: 231 SGSLVTARCALEQGREVFALPGP-----------IGNPGSEGPHWLIKQGAILVTEPEEI 279 + + A A + + V L G I + + A V E +I Sbjct: 118 TAVEILATYANK--KPVILLRGTGGWTDRISKVLIDDKYLDNRKMAPVYQAWSVEEVLDI 175 Query: 280 LENLQ 284 +E +Q Sbjct: 176 IEKIQ 180 >UniRef50_A3TZ49 DNA processing protein DprA, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ49_9RHOB Length = 77 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 24/73 (32%) Query: 293 APENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 + + D A E+L +G D + + V + +LE+ G + Sbjct: 5 PETPAPEARDPAQTAALHREILDRLGPAPIAEDQLIRDLSRAARHVTPAITQLEMQGRVR 64 Query: 353 AVPGGYVRLRRAC 365 GG + L Sbjct: 65 RQAGGLLALDPGA 77 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 21/69 (30%), Gaps = 5/69 (7%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLE-QPN 71 I + + +I V + L + + F ++ ++ ++ N Sbjct: 189 IKGIGPKTAAALLQEFGSLENILENVDK---LKGKLKESFKELDKEQLQRMKEIIKLDAN 245 Query: 72 HHL-IPADS 79 + I + Sbjct: 246 IEINIKIED 254 >UniRef50_Q1PUX4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUX4_9BACT Length = 207 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 23/122 (18%) Query: 120 WYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + + + L RG+ + G + G+ GV + ++ G I V+ Sbjct: 29 PAYKDAAKKLGKALTARGIGLVYGGGSVGLMGVIAETVMREKGEVIGVIP---------- 78 Query: 179 HARLA-ASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L ++ + V+EF + R ++ LS + + G++ Sbjct: 79 -KALFSREIVRRE---VTEFH-----EVASMHERKTLMVQLSDAFIAMPGG--CGTMDEF 127 Query: 238 RC 239 Sbjct: 128 FE 129 >UniRef50_B3E9F5 Putative uncharacterized protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E9F5_GEOLS Length = 196 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 24/130 (18%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 G+R R + L +G+ + G A G+ G+ + L+ G V+ Sbjct: 13 GTR---PEYSAAARALGQALVAQGIELVYGGASVGLMGIVARTVLEGGGRVTGVIP---- 65 Query: 173 TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 L E+ AL S LD + + R +++ LS G + + + G Sbjct: 66 -----------RLLAEKEVALTS---LDDLRIVDSMHERKALMAELSDGFIALPGGI--G 109 Query: 233 SLVTARCALE 242 ++ L Sbjct: 110 TIEEFVEVLT 119 >UniRef50_B1JB72 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=B1JB72_PSEPW Length = 482 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 62/275 (22%) Query: 50 QRFLSFPRKSIESSLCWLEQPNHHLIPADS-EFYPPQLLATTDYPGALFVEGELHALHSF 108 + + R+ E + L++ + D P L A + Sbjct: 238 EEAARYRRRKQELHIQDLKRFGIQTLLVDEYADIPAILRAIEE------------QFLKK 285 Query: 109 QLAVVGSRAHSWYG-------ERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + GS YG + +L G + +G G+ A Sbjct: 286 TIFISGS--AEEYGDWKKDEALDFIHSLSSSLVKHGYRVVNGFGWGVGSAVINGA----- 338 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPR------RNRII 215 L+ I+ + + ++ FP + R R+I Sbjct: 339 ---------LDAIY--SNPEKFSE----DQLVMRPFP--QVASQGQDLKVLWQQYRERMI 381 Query: 216 SGLSKGVLVVEAALRSGSLVTA-------RCALEQGREVFALPGPIGNPGSEGPHWLIKQ 268 + + V G +V+A A+ QG +P PIG G + K Sbjct: 382 ALSGIALFVFGNKTEGGEIVSAPGVEREFDIAVRQG----VVPVPIGATGYKAKELAEKV 437 Query: 269 GAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQ 303 A + + L L L D + Sbjct: 438 MADPAKYAPD-DQWLAESLKNLNDPAAGAKSIEAA 471 >UniRef50_B8PB00 Predicted protein n=2 Tax=Postia placenta Mad-698-R RepID=B8PB00_POSPM Length = 379 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 38/211 (18%) Query: 124 RWGRLFCETLATR-GVTITSGLARGIDGVA--HKAALQVNGVSIAVLGNG-LNTIHPRRH 179 + + + +A + I G A GID A + V+I G+ L+ ++P + Sbjct: 137 EHVKEWRKKVADAKDIYIVGGGAVGIDEYAGEIRETYPHTKVTIVHSGSMLLSDVYPEKF 196 Query: 180 ARLAASLLEQGG--ALVSEFPLDVPPLAYN--FPRRNRIISGLSKGVLVVEAALRSGSLV 235 + G + SE+ +D P A F R + LV+ A G+ Sbjct: 197 RKDMERRCLARGINVVFSEY-VDTFPEAGTVGFTTRKGTQFATAD--LVIPAF---GARP 250 Query: 236 TARCALEQGREVFALPGPIGNPGSEGPHWLIK----QGAILVTEPEEILENLQFGLHWLP 291 A G +V A S+G + G V +I+ Sbjct: 251 NTSVAATLGDDVLA---------SDGCVKVRPTLELPGHPGVFAVGDIIHW--------- 292 Query: 292 DAPENSFYSPDQQDVALPFPELLANVGDEVT 322 E + +A+ +L+ + + Sbjct: 293 --RECKQAAKGNAHLAVVAANVLSLLAGQPL 321 >UniRef50_Q8TUS6 ERCC4-like helicase-nuclease n=1 Tax=Methanopyrus kandleri RepID=Q8TUS6_METKA Length = 741 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 15/53 (28%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L I + + R+ + + G+ R+A+ F Sbjct: 689 LSCIPGVGPELARRLLDEFGSIGDVVNASPSELKRVKGIGERKAREIRRFLWS 741 >UniRef50_A8UZQ2 Putative uncharacterized protein (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZQ2_9AQUI Length = 69 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 297 SFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 D+ ++L ++ + T D + E+ P +++T L LEL I G Sbjct: 4 KKDENVLPDLDEIEKQILDSIENN-THFDNLLEKLSIPADQLITILFNLELKNLIKNENG 62 >UniRef50_A8VQ13 Peptidase M20 n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQ13_9BACI Length = 179 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 40/142 (28%), Gaps = 25/142 (17%) Query: 108 FQLAVV-GSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSI 164 + V GSR R + +A R +T+ G A G L G I Sbjct: 2 KAITVFCGSREGSDPVYMREAYQLGKAMAERELTLVYGGAGIGCMRAMADGVLDHGGKVI 61 Query: 165 AVLGNGLNTIHPRRHARLAA-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 V+ L R + RL ++ + P R +++ + Sbjct: 62 GVMPEKLANR-ERSYRRLTDLRIVA------------------DMPTRKKVMMQEGDAFI 102 Query: 224 VVEAALRSGSLVTARCALEQGR 245 L G+L + Sbjct: 103 AFPGGL--GTLEEWFEVYSWAK 122 >UniRef50_C1YM75 Transcriptional regulator of sugar metabolism n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YM75_NOCDA Length = 257 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 20/48 (41%) Query: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 LL V D V V+ +A G V L ELE AG + GG Sbjct: 3 HQGLLDAVTDGVQRVEDLARELGISPSTVRRGLGELERAGKVVRTHGG 50 >UniRef50_D1AD65 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=D1AD65_THECD Length = 156 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 59/171 (34%), Gaps = 26/171 (15%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLG 168 Q+AV G S ERW R LA RG + G G+ A A G + +L Sbjct: 4 QIAVCGPGECSPREERWARQVGRLLAERGAVVLCGGYGGVMAAAAAGARAAGGTVVGLLS 63 Query: 169 NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFP--RRNRIISGLSKGVLVVE 226 ++ GA D+ + RN ++ + V+VV Sbjct: 64 G-----------------ADRQGA-----CPDLTVVVPTGLGQARNAVLVNSADAVIVVG 101 Query: 227 AALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPE 277 + G+L A+ +G V AL G + GP ++ A E Sbjct: 102 GSW--GTLSELAHAMRRGTPVVALGGWRVIDAAGGPVPGVRHAATPAEAVE 150 >UniRef50_C0ETT2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETT2_9FIRM Length = 199 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 44/163 (26%), Gaps = 31/163 (19%) Query: 105 LHSFQLAVVG--SRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNG 161 + + + G S + +A R + G A G+ G L+ G Sbjct: 16 MTKLTICMYGAASDRIDSIYINAAEALGKEIAKRHHKLIYGGGASGLMGACANGVLENGG 75 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 V+ +N P + ++ R ++ + Sbjct: 76 EVTGVVPTFMNKFEPIKSE--CTEIV----------------RTETMSLRKEVMEENADA 117 Query: 222 VLVVEAALRSGSLVTARCAL---EQGRE-----VFALPGPIGN 256 ++ + G+ L E GR V+ + G + Sbjct: 118 FVIAPGGI--GTFDEFFQILTLTELGRSAKPIIVYNVSGFYDD 158 >UniRef50_B2HZN9 Predicted Rossmann fold nucleotide-binding protein n=12 Tax=Bacteria RepID=B2HZN9_ACIBC Length = 193 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 39/197 (19%) Query: 123 ERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 ++ +L E +A +G T+ G R G+ GV +ALQ G I V+ Sbjct: 19 QQIAQLTGEAIAKQGKTLVYGGGRSGLMGVVADSALQAGGQVIGVIP-----------RA 67 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 L L G + N R ++ LS G + + G+L Sbjct: 68 LVDRELAHPGL-------TKLYVVENMHERKTKMADLSDGFIALPGGA--GTLEEIF--- 115 Query: 242 EQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSP 301 I Q E+L + D + Sbjct: 116 ---------------EQWTWAQLGIHQKPCAFLNVAGFYEDLLKMIQGTVDNGFSQARFV 160 Query: 302 DQQDVALPFPELLANVG 318 D+ + ++L Sbjct: 161 DKLIASDKIEDILQQFE 177 >UniRef50_B8C494 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C494_THAPS Length = 291 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 24/134 (17%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIAVLGN---- 169 S LA RG T +G + G ++ A NG + V+ Sbjct: 17 SSKTPEKYTNAAYELGIILARRGHTCVNGAGSAGCMAAMNQGASDGNGRIVGVIHEMFIV 76 Query: 170 -GLNTIHPRRHARLAASLLEQGG---ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 G + + +H GG LV + R R++ + G++V+ Sbjct: 77 DGSDWLEGSQHT-----FANNGGKHELLV--------AKGDDLQERKRLLVKGADGLVVL 123 Query: 226 EAALRSGSLVTARC 239 G+ Sbjct: 124 PGGP--GTWDELWE 135 >UniRef50_B9M108 Putative uncharacterized protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M108_GEOSF Length = 132 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 35/139 (25%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGV---TITSGLARGIDGVAHKAALQVNGVSIA 165 ++ V GSR + Y R + RG+ I G+ARGID +A + A + +I Sbjct: 2 KVIVAGSRGITDY--ELIRTALDEARNRGLNITAIVDGMARGIDCLASRYATENGIDNIR 59 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V + + G L RN ++ ++ ++ V Sbjct: 60 VAAD-------------WKRYGKGAGIL-----------------RNEQMAEIADALIAV 89 Query: 226 EAALRSGSLVTARCALEQG 244 G+L CA +G Sbjct: 90 WDGKSPGTLHMIECAKAKG 108 >UniRef50_B7ABK9 Transcriptional regulator, ArsR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7ABK9_THEAQ Length = 232 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 1/60 (1%) Query: 305 DVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRA 364 ++ L + V+A G V+ +L LE G + G RL+ Sbjct: 171 ELDDRDQRLFQALRTGPKGPSVLARELGVSPSTVLYRLKRLEGLGLVEK-ADGVYRLKET 229 >UniRef50_UPI0001C41FEF hypothetical protein mru_1379 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41FEF Length = 179 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 37/134 (27%), Gaps = 23/134 (17%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 GS E +A RG + G GI G K A+ +G + + Sbjct: 9 GSTQIKSKYTDEAYKLGEEIAKRGHDLVFGGGSTGIMGAVSKGAIDNHGKVLGIAP---- 64 Query: 173 TIHPRRHARLAASLL-EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + + + +E + R ++ S ++ + Sbjct: 65 -----EWMEEFEGICKDCDEFIYTE----------SMDERKKLFLENSDAFIIAPGGI-- 107 Query: 232 GSLVTARCALEQGR 245 G+L + + Sbjct: 108 GTLDEFYEVIVLKK 121 >UniRef50_B1HS56 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HS56_LYSSC Length = 175 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 22/117 (18%) Query: 121 YGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 YGE+ LA G + G ++ G+ G A L G I V+ L Sbjct: 13 YGEKAAE-LGAVLAKHGHGVVYGGSKTGLMGKVADAVLAAGGEVIGVMPTHLQK------ 65 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 LA A ++E + R ++ L+ + + G+L Sbjct: 66 RELAH-------ASLTEIHF-----VESMHIRKAKMAELADAFIALPGGA--GTLDE 108 >UniRef50_A0L3X5 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3X5_MAGSM Length = 173 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 17/108 (15%) Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPL 199 I SG G+D A AAL +L G + R + G + +P+ Sbjct: 5 IISGGQTGVDRGALDAALSQG-----LLCGG----WVPANRR------AEDGPIPPRYPV 49 Query: 200 DVPPLAYNFPRRNRIISGLSKGVLVV-EAALRSGSLVTARCALEQGRE 246 RNR+ S L++ + AL G+ + A GR Sbjct: 50 RALVRGGY-LVRNRLNVQDSDATLIITDGALSGGTARSVEFARRLGRP 96 >UniRef50_B9L9L9 DapE downstream ORF 2 n=1 Tax=Nautilia profundicola AmH RepID=B9L9L9_NAUPA Length = 165 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 1/72 (1%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTI 174 SR G LA G T+ G G+ K + G I + + I Sbjct: 10 SRVDDAELYDEGVELGRFLAENGFTVKCGGYGGLMEAVSKGVKEGGGEVIGITLEYFDEI 69 Query: 175 HPRRHARLAASL 186 P+ + L + Sbjct: 70 RPK-NPYLTKRI 80 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L + + RI L++ GL R A+ + + Sbjct: 559 LDDLPGVGPVRKRRILEHFGTPQAFLEASLEELEAVPGLPGRVAREIHARLHR 611 >UniRef50_UPI00017437C3 Lysine decarboxylase family protein n=2 Tax=candidate division TM7 RepID=UPI00017437C3 Length = 234 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 62/207 (29%), Gaps = 38/207 (18%) Query: 106 HSFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVS 163 + + + GS + + + L+ +G TI +G GI +++ A + NG S Sbjct: 49 YHKTVTIFGSARIKETNKYYKLAMAIAKKLSNQGYTIITGGGGGIMEASNRGAFEANGNS 108 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 + G N P L + + +F R +++ + + Sbjct: 109 V-----GFNIKLPHE-QSLNSHTTDS-------------FSFQHFAPRKIVMTLYADAYI 149 Query: 224 VVEAALRSGSLVTARCALEQ---GREVFALPGPIGNPGSEGPHWLI----KQGAILV--- 273 G+L L G+ A G+ + I + L+ Sbjct: 150 FFPGGF--GTLDELGEILTLVQTGKTTKAPIVLFGSEFWHLFNEFICTEMRDKEQLITPG 207 Query: 274 -----TEPEEILENLQFGLHWLPDAPE 295 T ++I E + L Sbjct: 208 DESIYTITDDIDEAVDLVLKNKTYCEH 234 >UniRef50_Q5ZSL8 Lysine decarboxylase n=4 Tax=Legionella pneumophila RepID=Q5ZSL8_LEGPH Length = 190 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 26/138 (18%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S ++ + L++ G+T+ G ++ G+ G+ L+ I V+ Sbjct: 21 SEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRMLKNGSNVIGVIP--------- 71 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L + G +E + + R ++ LS G +++ SGSL Sbjct: 72 --KSLVDTEKAHDGL--TELH-----VVNSMYERKILMCKLSDGFILLPGG--SGSLDEF 120 Query: 238 RCA-----LEQGREVFAL 250 L ++ + Sbjct: 121 FEMFTLVQLGYHKKPCCV 138 >UniRef50_B9KEW7 Lysine decarboxylase family protein n=18 Tax=Campylobacter RepID=B9KEW7_CAMLR Length = 211 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 21/77 (27%), Gaps = 4/77 (5%) Query: 107 SFQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 + GS + L G +I SG GI A+ A+Q + Sbjct: 19 QKGITFFGSARLAQDNEYCILASKLAQKLVDLGYSIISGGGAGIMQAANYGAMQSQASHL 78 Query: 165 AVLGNGLNTIHPRRHAR 181 G N P Sbjct: 79 K--SFGFNIHLPFEQKA 93 >UniRef50_B2I133 Predicted Rossmann fold nucleotide-binding protein n=18 Tax=Moraxellaceae RepID=B2I133_ACIBC Length = 207 Score = 44.9 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 22/133 (16%) Query: 114 GSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGL 171 GSRA ++ +A +G + G A G+ G ++ L G ++ V+ Sbjct: 29 GSRAGNNPIYREKAIELASGIAEQGFGLVYGGASIGLMGQVAESVLAHGGEAVGVIPE-F 87 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + HA L V E R +++ + + + L Sbjct: 88 MLDYEVAHAGLTE-------LHVVE----------TMHERKAMMAERASAFIALPGGL-- 128 Query: 232 GSLVTARCALEQG 244 G+ G Sbjct: 129 GTFEEILEIATWG 141 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 10/82 (12%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNH 72 + + ++ + A + Q + + ++ + + + L + Sbjct: 191 VPGVGPKTAAKLIDQFGSLEQLFANLEQVSA--AKLREKLAAHRQDA------QLARRLI 242 Query: 73 HLIPADSEFYPPQLLATTDYPG 94 L D P L T P Sbjct: 243 RL--KDDLELPTSLDDYTLPPP 262 >UniRef50_B6JCC1 3-isopropylmalate dehydrogenase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JCC1_OLICO Length = 276 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 30/132 (22%) Query: 123 ERWGRLFCETLATRGV-----------TITSGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 R F + RG I +G GI A++ A + SI G Sbjct: 93 YSIAREFGRIASERGGAFAPRHRWRDNVIATGGGPGIMEAANRGASDIGAPSI-----GF 147 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 N P + ++ + F R ++ + + + Sbjct: 148 NITLPHEQVP--------NPYIT----PELSFRFHYFAMRKMHLAMRANALAIFPGGY-- 193 Query: 232 GSLVTARCALEQ 243 G++ L Sbjct: 194 GTMDELFELLTL 205 >UniRef50_A2U3T9 Possible lysine decarboxylase n=2 Tax=Polaribacter RepID=A2U3T9_9FLAO Length = 193 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 106 HSFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVS 163 + GS + ++ + AT + + G + G+ GV L+ G Sbjct: 1 MKRVVVFCGSSIGFNPVYKKAAKSLGHYFATHNIGLVYGGGKIGMMGVLADTILENEGEV 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I V+ L + HA + ++ + +SE R I+S L G + Sbjct: 61 IGVIPKLLEKV-EVIHAGVEEMIVCKN---MSE--------------RKVIMSKLVDGYI 102 Query: 224 VVEAALRSGSLVTARCALEQG 244 + G+L AL Sbjct: 103 TLPGGF--GTLDELFEALTLN 121 >UniRef50_A8MCE8 Putative uncharacterized protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCE8_CALMQ Length = 174 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 21/133 (15%) Query: 120 WYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 + + + L TI G G+ V A+ + +L P + Sbjct: 14 DEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLIL--------PIEN 65 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 + A++ F R+ ++ S ++ + A+ G+++ A Sbjct: 66 EN----IEAPKDAVIVR-------TGMEFRERSVVLVRSSDSLIAIGGAV--GTIMEALL 112 Query: 240 ALEQGREVFALPG 252 A G+ L G Sbjct: 113 AYAMGKPTIVLKG 125 >UniRef50_A3WE77 Predicted Rossmann fold nucleotide-binding protein n=11 Tax=Alphaproteobacteria RepID=A3WE77_9SPHN Length = 290 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 49/184 (26%), Gaps = 42/184 (22%) Query: 83 PPQLLA--TTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET-------- 132 P LL ++ + + Q + ++ S Y ++ + + Sbjct: 63 PEMLLDEARVGSTMVMYGSARIPSPEEAQAKIDAAKNASEYEQKVAQSLADKAKYYHEAY 122 Query: 133 -LA------------TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRH 179 LA R +T+G I ++ A G SI GLN + P Sbjct: 123 KLARLVSEKAIIEDGKRQFVVTTGGGPSIMEAGNRGASDAGGESI-----GLNIVLPHEQ 177 Query: 180 ARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 A S + + F R ++ V V G+ Sbjct: 178 APN------------SYVTPYLSLNFHYFALRKMHFLLRARAVAVFPGGF--GTFDELFE 223 Query: 240 ALEQ 243 L Sbjct: 224 LLTL 227 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 20/85 (23%), Gaps = 6/85 (7%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIES 62 + L I + +A I ++ G+ A + + Sbjct: 601 LVALS-IRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVIAAALKEWFAEDWHR 659 Query: 63 SL-CWLEQPNHHLIPADSEFYPPQL 86 + + + E P L Sbjct: 660 EIVDTWAEDGVRMEDEQDESTPRTL 684 >UniRef50_C6C1L8 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1L8_DESAD Length = 188 Score = 44.5 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 23/139 (16%) Query: 109 QLAVV-GSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIA 165 + + GS + + R LA R +T G + G+ +AL G I Sbjct: 3 SICIFLGSNTGNDPLYMQAARETGLELAKRNITCVYGGSSTGMMNELADSALGAGGKVIG 62 Query: 166 VLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVV 225 V L G SE + R +++ LS G + + Sbjct: 63 VTV-----------QALKDKEQFHKGL--SELH-----VTPTMHERKKMMIELSDGFIAL 104 Query: 226 EAALRSGSLVTARCALEQG 244 + G+ Sbjct: 105 PGGI--GTYEEFFEVYTLK 121 >UniRef50_C7JH32 Lysine decarboxylase family n=8 Tax=Acetobacter pasteurianus RepID=C7JH32_ACEP3 Length = 194 Score = 44.5 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 23/140 (16%) Query: 108 FQLAVV-GSRA-HSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSI 164 +AV GSR ++ + + LA G+ + G A G+ GV A +Q G Sbjct: 6 RAVAVFCGSRMGAKPVYQQAAQETGKELAQAGIRLVYGGGANGLMGVVAHAVIQAGGSVT 65 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 V+ + + E+ VSE + + R +I+ + V Sbjct: 66 GVIP---------EFLKTREKMNEE----VSEL-----IVTDSMHTRKQIMFSRADAFWV 107 Query: 225 VEAALRSGSLVTARCALEQG 244 + G+ L Sbjct: 108 LPGGF--GTFEELLEILTWK 125 >UniRef50_B6KL60 Lysine decarboxylase domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KL60_TOXGO Length = 361 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 22/122 (18%) Query: 129 FCETLATRGVTITSGLARGIDGVAHKAALQVNG-VSIAVLGNGLNTIHPRRHARLAASLL 187 + L V I +G G+ A++ A +V G +I G+ P L + Sbjct: 183 LSQELVYCPVAICTGGGPGLMEAANRGASEVPGARTI-----GMGITLPFE-GGLNRYIT 236 Query: 188 EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC--ALEQGR 245 + G EF R + + GV+ G+L AL+Q Sbjct: 237 KDLGF---EF--------QYLFARKFWMINTALGVIAAPGGF--GTLDELMEVLALKQSN 283 Query: 246 EV 247 ++ Sbjct: 284 KL 285 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 8/63 (12%) Query: 1 MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFP 56 M + E L I + + + L G++ AQ+ + Sbjct: 630 MTENE----LDGIPGIGPTRKRALLKHFGSAKAVSRAGLSDLRAVDGISAAMAQQIYDWY 685 Query: 57 RKS 59 Sbjct: 686 NDR 688 >UniRef50_Q2BJX1 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJX1_9GAMM Length = 186 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 23/139 (16%) Query: 108 FQLAVVGSRAH--SWYGERWGRLFCETLATRGVTITSGLA-RGIDGVAHKAALQVNGVSI 164 + V S R E LA + +T+ G A G+ G AAL G I Sbjct: 2 QSICVFCGSKPGNSPVFAEQARKVGEALAEQELTLIYGGATSGLMGEVADAALLAGGRVI 61 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLV 224 V+ + L + E +SE + R + + +S+G + Sbjct: 62 GVMPSQLEAK---------ERIHEG----LSEL-----IQVDDMASRKQKMLEISEGFIA 103 Query: 225 VEAALRSGSLVTARCALEQ 243 + +G+L + Sbjct: 104 LPGG--TGTLDEIFEMITL 120 >UniRef50_Q4QFI0 Putative uncharacterized protein n=6 Tax=Trypanosomatidae RepID=Q4QFI0_LEIMA Length = 332 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 23/193 (11%) Query: 116 RAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIH 175 R G + + +T+G G A+ A V G G+ Sbjct: 155 RLTPEDGSESLDDLQKRF--HDLVVTTGGGPGFMEAANHGAESVPGAVTM----GMGISL 208 Query: 176 PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 P + L + + + + F R + + +++ G+L Sbjct: 209 PFEN-GLNPHVTK-----------GLAFEFHYFFTRKFWMMYSCRAIVIAPGGF--GTLD 254 Query: 236 TARC--ALEQGREVFALPGPIGNPG-SEGPHWLIKQGAILVTEPEEILENLQFGLHWLPD 292 L+Q +++ +LP + + V EEI L Sbjct: 255 EMFELLTLKQTKKIPSLPVVLLGKEFWQTVVNWQALANYGVISQEEIDSLLFTDSAEEAV 314 Query: 293 APENSFYSPDQQD 305 FY D Sbjct: 315 EHIKDFYHRLASD 327 >UniRef50_A4EUY4 Decarboxylase family protein n=2 Tax=Rhodobacteraceae RepID=A4EUY4_9RHOB Length = 166 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 21/124 (16%) Query: 120 WYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 E+ LA RG+ + G G+ G +AA G + V+ Sbjct: 2 PAYEKAAEALGRGLAERGLRLVYGAGDVGLMGTVARAAQAAGGETFGVVP---------- 51 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTAR 238 L + + + R +++ + V+V+ + GSL Sbjct: 52 -EHLVKREVAKKDL-------STFVVTETMHERKKVMLYNADAVVVLPGGM--GSLDELF 101 Query: 239 CALE 242 A+ Sbjct: 102 EAIT 105 >UniRef50_D0T7B3 Nucleotide-binding protein n=2 Tax=Acinetobacter radioresistens RepID=D0T7B3_ACIRA Length = 193 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 23/119 (19%) Query: 123 ERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGL-NTIHPRRHA 180 + + +A RG T+ G R G+ GV +ALQ G I V+ + L + H Sbjct: 19 LETAQAVGQAIAQRGQTLVYGGGRSGLMGVIADSALQAGGAVIGVIPHALVDREL--AHP 76 Query: 181 RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARC 239 L +E + N R +S LS G + + G+L Sbjct: 77 DL------------TELH-----VVQNMHERKTKMSELSDGFIALPGGA--GTLEEIFE 116 >UniRef50_Q3AK57 Putative uncharacterized protein n=3 Tax=Synechococcus RepID=Q3AK57_SYNSC Length = 192 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 21/121 (17%) Query: 123 ERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 +R +A++G+ + G AR G+ G AAL G I V+ L Sbjct: 31 KRAATELGALIASQGMALVYGGARIGLMGAVADAALASGGKVIGVIPEALTQ-------- 82 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCAL 241 ++ G + + + R + L+ + + L G+L AL Sbjct: 83 --DEVVHTGLTHL--------EVVASMHERKARMLDLADAAVAMPGGL--GTLDELFEAL 130 Query: 242 E 242 Sbjct: 131 T 131 >UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria RepID=UVRC_HAHCH Length = 612 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFPRK 58 L ++ + + ++ +I+ L++ G++ AQ + + Sbjct: 560 LDAVPGIGPKRRRDLLNYFGSVRNIERASLEEIKRVPGISEVIAQTIYAAFHE 612 >UniRef50_UPI0001C31E20 hypothetical protein Cwoe_4889 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E20 Length = 337 Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 21/114 (18%) Query: 128 LFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 LA RG+ I G + G+ G AA+ G I VL L+ + Sbjct: 26 RLGTLLAQRGIGIVYGGGQVGLMGAVADAAMIAGGEVIGVLPRALDE----------REI 75 Query: 187 LEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA 240 G ++E + + R +++ L+ + + L G+L A Sbjct: 76 GHPG---ITEL-----RVVESMHERKALMAELADAFVALPGGL--GTLEELVEA 119 >UniRef50_Q1IMD9 Transcriptional regulator, MarR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMD9_ACIBL Length = 180 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 8/115 (6%) Query: 263 HWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEV 321 H G ++T+ + + + ++ +L + E Sbjct: 7 HASNYDGMRVMTKDPAVQTWWDELERLARILGQVGPDEVCCEGLSQRQCAILRVLVAREG 66 Query: 322 TPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG-------GYVRLRRACHVRR 369 T + +A + + L +LE G + V G VR+ R Sbjct: 67 TRISDLAAVSAISPSAMTRVLEKLEARGLVERVRGAHDDGRAAMVRITPEGRRTR 121 >UniRef50_C6B3W9 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=C6B3W9_RHILS Length = 193 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 23/129 (17%) Query: 118 HSWYGERWGRLFCETLATRGVTITSGLA-RGIDGVAHKAALQVNGVSIAVLGNGLNTIHP 176 S R L G+TI G +G+ GV AAL+ G V+ L+ Sbjct: 19 ASEAFADGARALGGALGEAGITIIYGGTVKGLMGVVADAALEAGGSVHGVITESLHQRG- 77 Query: 177 RRHARL-AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLV 235 + HA L ++E R + LS + + + G++ Sbjct: 78 QSHAGLTRHEIVET------------------LRSRKERMVELSDAFIALPGGI--GTIE 117 Query: 236 TARCALEQG 244 Sbjct: 118 ELMEVWTMN 126 >UniRef50_A8LF72 Rossmann fold nucleotide-binding protein-like protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF72_FRASN Length = 165 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 Q+AV+G + E LA G+T+ +G G+ A + A G ++ +L Sbjct: 2 RQVAVIGPGEATPEQETDAERLGAGLARLGLTVVTGGLGGVMAAASRGARAAGGRTLGLL 61 Query: 168 GN 169 Sbjct: 62 PG 63 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 15/55 (27%), Gaps = 4/55 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 L I + + H I+ L G++ A+R + Sbjct: 644 LQEIPGIGPSRKRALLHHFGTLKEIERASLGDLGKVPGISAESAKRIFDYFHPQP 698 >UniRef50_D0CIS5 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CIS5_9SYNE Length = 235 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 22/147 (14%) Query: 98 VEGELHALHSFQLAVVGSRA-HSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKA 155 ++G + GS + S + +AT+G+ + G AR G+ G A Sbjct: 48 MKGSRPGAMNRIAVYCGSSSGDSSLFKLAATELGALIATQGMALVYGGARIGLMGAVADA 107 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 AL G I V+ L ++ G + + + R + Sbjct: 108 ALLAGGDVIGVIPEALTQ----------DEVVHTGLTHL--------EVVGSMHERKARM 149 Query: 216 SGLSKGVLVVEAALRSGSLVTARCALE 242 L+ + + L G+L AL Sbjct: 150 LDLADAAVAMPGGL--GTLDELFEALT 174 >UniRef50_A3SXQ1 Decarboxylase family protein n=14 Tax=Alphaproteobacteria RepID=A3SXQ1_9RHOB Length = 184 Score = 43.7 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 21/130 (16%) Query: 105 LHSFQLAV-VGSR-AHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNG 161 + + V GSR LA + G G+ G +AA G Sbjct: 1 MVQKSVCVYCGSRPGDDPEYTAQADALGRALAQNDWRLVYGAGDVGLMGTVARAAQTAGG 60 Query: 162 VSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKG 221 + V+ + + + + +V+E R +++ Sbjct: 61 TTFGVIP---DHLVKWEVGK-----TDLTTYVVTE----------TMHERKKVMFMNCDA 102 Query: 222 VLVVEAALRS 231 V+V+ S Sbjct: 103 VVVLPGGAGS 112 >UniRef50_UPI0001B4ADAE hypothetical protein B2_11914 n=1 Tax=Bacteroides sp. 2_1_7 RepID=UPI0001B4ADAE Length = 147 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 37/144 (25%) Query: 109 QLAVVGSRAHSWYGERWGRLFCETLATRGVT------ITSGLARGIDGVAHKAALQVNGV 162 ++ V G R + Y E A I SG+A G D +A + A + Sbjct: 26 KVIVAGGRDFTDY-EFMKESLGHLFAQEDFCGDSDIKIISGMADGADTLAIRFADEFE-- 82 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 L I + +L + RN + ++ + Sbjct: 83 --------LTKILFPANWKLHHRMA--------------------GFLRNEDMMEIATHL 114 Query: 223 LVVEAALRSGSLVTARCALEQGRE 246 + G+ A +G Sbjct: 115 VAFWDGKSKGTQHIIELAKNKGIP 138 >UniRef50_A3MWN8 Transcriptional regulator, TrmB n=5 Tax=Thermoproteaceae RepID=A3MWN8_PYRCJ Length = 248 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 309 PFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG---YVRLRRAC 365 +A V +AE G P ++ T L +LE G +A GG R R Sbjct: 17 EAEIYVALVEQGPKSARELAEALGIPYTKIYTYLYKLENLGVVAKEGGGRPYRYRARPPA 76 Query: 366 HV 367 V Sbjct: 77 EV 78 >UniRef50_C0VNG3 Lysine decarboxylase n=17 Tax=Bacteria RepID=C0VNG3_9GAMM Length = 194 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 58/218 (26%), Gaps = 45/218 (20%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 ++ + + +A +G T+ G R G+ GV +AL+ G + ++ N Sbjct: 15 DPIYQQMAQATGQAIAEQGKTLIYGGGRSGLMGVVADSALKAGGRVVGIIPN-------- 66 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 L L G +E + N R +S + + + G+L Sbjct: 67 ---ALVDRELAHKGL--TELY-----VVDNMHERKTQMSEQADAFIALPGGA--GTLEEI 114 Query: 238 RCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENS 297 I Q ++L + + Sbjct: 115 F------------------EQWTWNQLGIHQKPCAFLNVGGFYDDLIKMIQGSVARGFSQ 156 Query: 298 FYSPDQQDVALPFPELLANVG-DEV-----TPVDVVAE 329 DQ V E+L + VD + Sbjct: 157 SRFVDQLIVENDINEILTAFSTYQPATPKWMSVDEIQA 194 >UniRef50_A6NU27 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NU27_9BACE Length = 169 Score = 43.7 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 141 TSGLARGIDGVAHKAALQVN----GVSI-AVLGNGLNTIHPRRHARLAASLLEQGGALVS 195 G+A+G D +AAL + GV++ A L R + R Sbjct: 51 ICGMAKGADFYFCEAALALRDRRPGVTVEAALPC--EEQAARWNERDRNRYFRLVAQCDY 108 Query: 196 EFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 E + RR+R + S ++ V + G++ T A+++G E+ L + Sbjct: 109 ETMVQHHYDKGCMLRRDRYMVDRSAMIIAVYGGVLGGTMYTLSYAMKKGLELKILDVEV 167 >UniRef50_C7PMF6 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMF6_CHIPD Length = 189 Score = 43.4 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 19/108 (17%) Query: 123 ERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHAR 181 + + + + G A G+ G+ L + G I VL L H Sbjct: 19 KEATIELARCIVKNNLRLVYGGAAVGLMGLIADEVLALGGQVIGVLPEKL-RDREVGHKN 77 Query: 182 LAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 L +VS R +++ LS + + + Sbjct: 78 LTE------LHIVS-----------TMHERKAMMANLSDYFVAIPGGI 108 >UniRef50_D1B924 Glucose-1-phosphate adenylyltransferase n=2 Tax=Synergistaceae RepID=D1B924_THEAS Length = 429 Score = 43.4 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 42/186 (22%) Query: 75 IPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLA 134 + + +P + ++ +D PG + +VVG+ G R Sbjct: 285 LTLYNPLWPIRTVSYSDPPGFTY------PDKGQGCSVVGTLRA--EGSRVLGAIVHRSV 336 Query: 135 TRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALV 194 + + A + + GV I + +L +L+ + Sbjct: 337 LSRNCVINAGA------VLEECIVGQGVVIG------------ENCKLRRVILDAYNVI- 377 Query: 195 SEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPI 254 P + + R R GV+V+ Q R LP Sbjct: 378 ---PPNTVIGYNHDVDRERYHVDPESGVVVLGMPK------------IQLRRTLGLPQDG 422 Query: 255 GNPGSE 260 +P S Sbjct: 423 DDPLSA 428 >UniRef50_Q01ZQ3 Putative uncharacterized protein n=13 Tax=Bacteria RepID=Q01ZQ3_SOLUE Length = 194 Score = 43.4 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 63/202 (31%), Gaps = 39/202 (19%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNT 173 S S LA +G+ I G + G G AAL G VL ++ Sbjct: 12 SGRSSEIYLEAAARLGRILAGQGIAIVYGGSSLGSMGQLASAALAAGGKVTGVLPRFMDE 71 Query: 174 IHPRRHARLAA-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSG 232 + L +++ + R R++ LS + + G Sbjct: 72 -LEWGNRALTELRIVD------------------DMHERKRVMLELSDAAIALPGG--CG 110 Query: 233 SLVTARCALEQGR------EVFALPGP-IGNPGSEGPHWLIKQGA---------ILVTEP 276 +L A+ R V + +P E + + + + T+P Sbjct: 111 TLEELFEAITWKRLGLYFGPVVLVNVNGFFDPCIELLNRCVDECFMDEKHRAMWSVATDP 170 Query: 277 EEILENLQFGLHWLPDAPENSF 298 E ++E L+ W DA + + Sbjct: 171 EAVMETLREAPAWSRDARKFAA 192 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 43.0 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 18/67 (26%), Gaps = 5/67 (7%) Query: 13 ISSLYGDDMVRIAHWVAKQSHI----DAVVLQQTGLTLRQAQRFLSFPRK-SIESSLCWL 67 I + +A I + G+ A+ + + R + L Sbjct: 524 IPMVGQKTAKILAEHFKSLEAIAEASYETLKDIPGIGPEIARSIVEYFRNPKTREIIEKL 583 Query: 68 EQPNHHL 74 ++ L Sbjct: 584 KKAGVKL 590 >UniRef50_O30253 DNA repair protein, putative n=1 Tax=Archaeoglobus fulgidus RepID=O30253_ARCFU Length = 208 Score = 43.0 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPR 57 L +I + ++ + I + + G+ ++A+ F R Sbjct: 157 LTAIPGIGEKKAEKLLDYFGSIQRIANASIAELKRVDGIGEKKAREIYRFFR 208 >UniRef50_Q3ZX61 Conserved domain protein n=5 Tax=Dehalococcoides RepID=Q3ZX61_DEHSC Length = 196 Score = 43.0 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 16/147 (10%) Query: 109 QLAVVGSR--AHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAV 166 + V+GS + ++ R +A R + +G G+ + + GV + + Sbjct: 2 TIGVMGSAGGTMTDETKKSLRCLGACIAKRKHVLITGACPGMPHETVLGSKEEGGVVVGI 61 Query: 167 LGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVE 226 LN H S A++ R V+ Sbjct: 62 SPA-LNL---EEHVEKYHSPTRGYDAII--------YTGSGLMGREIENIRSCDVVIF-- 107 Query: 227 AALRSGSLVTARCALEQGREVFALPGP 253 A RSG+L A ++G+ + L G Sbjct: 108 AGGRSGTLGEFAIAYDEGKVIGVLRGS 134 >UniRef50_A8TPK1 Amidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPK1_9PROT Length = 200 Score = 43.0 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 45/140 (32%), Gaps = 24/140 (17%) Query: 106 HSFQLAVVGS--RAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGV 162 GS R + Y F LATRG + G R G+ G+ AAL+ Sbjct: 10 PLRVCVFCGSSARVDTRY-RDAATAFGRLLATRGDELVYGGGRVGLMGLVADAALEGGAR 68 Query: 163 SIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 V+ L LE G VSE + + +R + S Sbjct: 69 VTGVIP-----------RFLMD--LEVGHGAVSEL-----VITDSMHQRKAEMYERSDAF 110 Query: 223 LVVEAALRSGSLVTARCALE 242 +V+ L G+L L Sbjct: 111 VVLPGGL--GTLDETLEVLT 128 >UniRef50_B3L1F5 Lysine decarboxylase, putative n=4 Tax=Plasmodium RepID=B3L1F5_PLAKH Length = 354 Score = 43.0 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 19/106 (17%) Query: 138 VTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEF 197 V + +G G A+K + NG S+ + P A +++ Sbjct: 198 VAVCTGGGPGFMEAANKGSRDANGRSLGFM-----ISLPFEKG--ANKYVDENL------ 244 Query: 198 PLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQ 243 + F R + LS +++ G+L L Sbjct: 245 ----SFKFHYFFTRKFWLIYLSLAFIILPGGF--GTLDEMMEILTL 284 >UniRef50_UPI000190332C filamentation induced by cAMP protein Fic n=2 Tax=Rhizobium etli RepID=UPI000190332C Length = 86 Score = 43.0 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 1/69 (1%) Query: 294 PENSFYSPDQQDVALPFPELLANVGDEV-TPVDVVAERAGQPVPEVVTQLLELELAGWIA 352 E+ + D A + + + ++ G P V L +LE G + Sbjct: 7 KEDRERITSESDRAGSALRIHDLFQQNPFMTANQLVQQTGLSAPTVNAALTDLERFGVVE 66 Query: 353 AVPGGYVRL 361 V G Sbjct: 67 EVTGRKRGR 75 >UniRef50_B5IAE6 ERCC4 domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAE6_9EURY Length = 221 Score = 43.0 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 5/60 (8%), Positives = 16/60 (26%), Gaps = 4/60 (6%) Query: 2 VDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAV----VLQQTGLTLRQAQRFLSFPR 57 + L S+ + + I + + G+ ++A++ Sbjct: 162 DEEWKIYALSSLPYIGEKIAKALLEHFGSIEKIARANIVELKKVEGIGDKKARQIYRIFH 221 >UniRef50_C3Q9G3 Lysine decarboxylase n=7 Tax=Bacteroidales RepID=C3Q9G3_9BACE Length = 177 Score = 43.0 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 27/136 (19%) Query: 109 QLAVVGSRAHSWYGERW----GRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVS 163 ++ + S S ++ R E + +G T+ G A G+ +A + G Sbjct: 3 KIGIFCS--ASENIDKVYFESARQIGEWMGQKGKTLIYGGASLGLMECIARAVKENGGKV 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVL 223 I V+ L E+ G + + LD N R II+ S+ ++ Sbjct: 61 IGVVPAKL----------------EENGKVST--LLDEEIHTRNLSDRKDIITEKSEVLV 102 Query: 224 VVEAALRSGSLVTARC 239 + + G+L Sbjct: 103 ALPGGV--GTLDEIFH 116 >UniRef50_UPI0001C4211A Hef nuclease n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C4211A Length = 842 Score = 43.0 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 13/47 (27%), Gaps = 4/47 (8%) Query: 12 SISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 S+ ++ + + +Q G+ + A+ Sbjct: 777 SLPNIGPVHAKNLLEHFGSVKAVLQADEKQLQEVDGIGKKTAKSIKE 823 >UniRef50_D1QTH1 Putative uncharacterized protein n=1 Tax=Prevotella oris F0302 RepID=D1QTH1_9BACT Length = 366 Score = 42.6 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 49/196 (25%), Gaps = 20/196 (10%) Query: 8 LRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWL 67 L L + + + I Q + + + + + L Sbjct: 169 LSLKDSAQMPRKSRFGLLFEHGYNDKILRH--------EGQYEAWKHYLKDNPRRLL--- 217 Query: 68 EQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSF-QLAVVGSRAHSWYGERWG 126 I + T + + G L +L V SR + Sbjct: 218 -------IKKQHADWFQVRRNVTFHGLTFSMIGNHFLLDCPEKLQVQCSRKITSEALSTQ 270 Query: 127 RLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASL 186 + A RG + S + A + I + NG + + R+ + Sbjct: 271 KQLLLEAARRGAVLVSPSISKGEREIMHEAFKEGLRMIILKENGFTNYY-KPSGRMFEAC 329 Query: 187 LEQGGALVSEFPLDVP 202 E L+S + Sbjct: 330 KEGRILLLSPWEHHTE 345 >UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRE6_DESVM Length = 762 Score = 42.6 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L + + + + + A ++ G+ R+A++ ++ Sbjct: 703 LQRVEGVGPKTARLLWDRFGTLAAMRAASEKELAEVPGIGPRRARQIHQRLKE 755 >UniRef50_Q2S4H5 Lysine decarboxylase-like protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4H5_SALRD Length = 324 Score = 42.6 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 23/121 (19%) Query: 125 WGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA 183 + RG + G A G+ GV +A + G V+ + L + Sbjct: 158 VAEALGREMGRRGHELIYGGGAVGLMGVLAEATHEAGGTVTGVIPSKL---------QDR 208 Query: 184 ASLL-EQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + + +V+E R RI+ + + G+L L Sbjct: 209 EGIAYDADELIVTE----------TMRERKRIMYENADAFAALPGGY--GTLEEFMEVLT 256 Query: 243 Q 243 Sbjct: 257 L 257 >UniRef50_B9Z8H7 Transcriptional regulator, IclR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8H7_9NEIS Length = 274 Score = 42.6 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 18/83 (21%), Gaps = 2/83 (2%) Query: 284 QFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD--EVTPVDVVAERAGQPVPEVVTQ 341 P D ++ V + ++ G P V Sbjct: 10 GPARPDAPRVFPEPPAMHDTDTPFERGLAVIQAFDPCGTPLSVSEIGQKTGIPRASVARC 69 Query: 342 LLELELAGWIAAVPGGYVRLRRA 364 L L+ G++ L Sbjct: 70 LYTLQQLGFVRPSADKRFALTPK 92 >UniRef50_C1ZCQ8 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCQ8_PLALI Length = 204 Score = 42.6 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 37/188 (19%) Query: 120 WYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRR 178 + + + +G + G + G+ G+ A + G I ++ Sbjct: 27 PDYQHAAVELAQLMVAQGWNLVYGGGSIGVMGIMADAVIAAGGKVIGIIP---------- 76 Query: 179 HARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS----- 233 LA + + +E + + R R + LS + + G+ Sbjct: 77 -EFLATREVMKDNC--TEL-----FVTDSMHSRKRQMMELSDAFVALPGGY--GTLEELL 126 Query: 234 -LVTARCALEQGREV-------FALP--GPIGNPGSEGPHW-LIKQGAILVTEPEEILEN 282 +T + + + F P G I + +EG + + T P ++LE Sbjct: 127 ETITWKQLGLHNKPIAVLNTRQFFTPLIGQIDHLVTEGFVRPEHRLLLRIATTPVDLLEQ 186 Query: 283 LQFGLHWL 290 L Sbjct: 187 LSLPAEPP 194 >UniRef50_Q9YC15 Repair endonuclease XPF n=1 Tax=Aeropyrum pernix RepID=Q9YC15_AERPE Length = 248 Score = 42.6 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 4/52 (7%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLS 54 L S + RI + G+ ++A+ Sbjct: 165 LYILQSFPGIGRRTAERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKK 216 >UniRef50_B9QW65 Putative uncharacterized protein n=2 Tax=Labrenzia RepID=B9QW65_9RHOB Length = 219 Score = 42.6 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 29/144 (20%) Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGL 171 GS E + +A G+ + G + G+ G +AA++ G ++ L Sbjct: 34 FGS---DPAHEAAAARLGQLIAESGLRLVYGGGSVGLMGTVARAAMECGGRVTGIIPQFL 90 Query: 172 NTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRS 231 + +E ++++ N R ++ S + + + Sbjct: 91 ------EKREVMLDTVED--LVITQ----------NMHERKHLMFEKSDAFIALPGGI-- 130 Query: 232 GSLVTARCA-----LEQGREVFAL 250 G+L A L Q R+ L Sbjct: 131 GTLEEAVEMMTWAQLGQHRKPVVL 154 >UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=UVRC_DESAA Length = 603 Score = 42.6 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 6/52 (11%), Positives = 16/52 (30%), Gaps = 4/52 (7%) Query: 9 RLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQ----TGLTLRQAQRFLSFP 56 L S+ + + + + G+++++AQ L Sbjct: 550 ALDSVPGIGEKRKKALLRHFGSIKRLKEASPEDIAQVPGISVKRAQEILEAL 601 >UniRef50_A4FKG2 Predicted DNA-binding transcriptional regulator n=3 Tax=Actinomycetales RepID=A4FKG2_SACEN Length = 256 Score = 42.6 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%) Query: 313 LLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + +D +AER G V+ L LE AG++ + RL Sbjct: 11 VLTALATGQQTLDQLAERLGVHKSTVLRLLRTLESAGFVRRDGVHHYRL 59 >UniRef50_C0CYA4 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYA4_9CLOT Length = 150 Score = 42.6 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%) Query: 205 AYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVF 248 P RNR + S ++ + G+ T R A +QG+++ Sbjct: 103 KRAIPARNRWLVDNSDYLIAMVWRDFGGAYTTLRYAQKQGKKII 146 >UniRef50_A8L2Z0 Transcriptional regulator, ArsR family n=4 Tax=Actinomycetales RepID=A8L2Z0_FRASN Length = 117 Score = 42.6 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRL 361 +L + PV+ + E+ G P V L L AG + P G RL Sbjct: 11 DPHRRRVLELLRAGPRPVNELVEQLGLSQPGVSKHLRILREAGLVTVRPDGQRRL 65 >UniRef50_D1VJF9 Transcriptional regulator, MarR family n=1 Tax=Frankia sp. EuI1c RepID=D1VJF9_9ACTO Length = 165 Score = 42.6 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 1/54 (1%) Query: 304 QDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG 356 + LLA + + G +V L ELE G + P Sbjct: 43 DGLRGYHYRLLAALEQWGPASQADLGRDTGIDRSDVTGALTELEARGLVERRPD 96 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 42.6 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 15/73 (20%), Gaps = 5/73 (6%) Query: 13 ISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIE-SSLCWL 67 I + +A W I A ++ G+ ++ + Sbjct: 646 IRHVGPVAARALADWFGSLDAIRAASSEELAAVEGVGPVIGAELQAWFDVDWHVDIVDSW 705 Query: 68 EQPNHHLIPADSE 80 + Sbjct: 706 TRAGVRFATPGHP 718 >UniRef50_Q5YWX8 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YWX8_NOCFA Length = 294 Score = 42.6 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Query: 292 DAPENSFYSPDQQDVALPFPELLANVGD--EVTPVDVVAERAGQPVPEVVTQLLELELAG 349 + + E+L + E PV +AER G L EL+LAG Sbjct: 1 MTDTQTGAARSPSPPTRRVVEILTLLAGAAEPLPVAAIAERLGIARATATAVLAELDLAG 60 Query: 350 WIAAVPGGYVRLRR 363 W VP RL Sbjct: 61 WAVRVPDRGYRLGP 74 >UniRef50_A7XFC5 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=A7XFC5_9CAUD Length = 195 Score = 42.6 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 46/163 (28%), Gaps = 25/163 (15%) Query: 106 HSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIA 165 + A++GSR L+ V SG A G+D K I Sbjct: 13 PLRRCALIGSRKAPSDILIMASTIGRVLSENRVVAHSGGAYGMDNAFMKYYDPDYRK-IF 71 Query: 166 VL--------GNGLNTIH--PRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRII 215 + NG + I LA LE V + P +P N RN Sbjct: 72 IPNWKFYDHKHNGHDVIAWQTLEQKNLAMDELEH----VYDNPRSIPLYMQNLFSRNVAQ 127 Query: 216 S---GLSKGV--LVVEAAL-----RSGSLVTARCALEQGREVF 248 L V ++ A G+ + A G F Sbjct: 128 VLGETLDDPVDCVIFWAKEVNGIVSGGTRIAVYVARRHGIPCF 170 >UniRef50_C1XG50 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XG50_MEIRU Length = 182 Score = 42.2 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%) Query: 110 LAVVGSRAHSWYGERW--GRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 + V GS + + +A G + +G G + A + G+ + + Sbjct: 4 ITVFGSSRAQPGTPAFIEAHAWGRAIAQAGFGVATGGYNGAMEAVSQGAKEAGGLVVGIT 63 Query: 168 GNGLNTIHPRRHAR 181 L P+R+ Sbjct: 64 APSL---FPQRNGP 74 >UniRef50_B7G6N1 Predicted protein (Fragment) n=3 Tax=Eukaryota RepID=B7G6N1_PHATR Length = 164 Score = 42.2 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Query: 102 LHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNG 161 + + ++G+R S+ ++ L L G + + A G G A + AL+ Sbjct: 16 IQQQGPQKYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHGAAIRGALRAER 75 Query: 162 V---SIAVLGNGLNTIHPRRHARLAASLLE 188 ++ VL ++ R L + + Sbjct: 76 PDLLTV-VLPQSMSKQT-RDSQALLKKVDD 103 >UniRef50_B4VWC6 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VWC6_9CYAN Length = 172 Score = 42.2 bits (98), Expect = 0.030, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 128 LFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLL 187 + LA++G T+ +G G+ K ++ G I + + + + + Sbjct: 25 KLGKYLASKGYTVKNGGYYGLMEAVSKGVVESGGQCIGITNASFDPK--PANQFITEEIK 82 Query: 188 EQG 190 + Sbjct: 83 AKD 85 >UniRef50_A4BFX1 Predicted Rossmann fold nucleotide-binding protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4BFX1_9GAMM Length = 178 Score = 42.2 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 34/120 (28%), Gaps = 21/120 (17%) Query: 124 RWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + L G +I G + G+ GV A L I V+ +L Sbjct: 19 ESTTKLGQALTDAGHSIVYGGGQVGLMGVIADAVLAGGQEVIGVIPT-----------QL 67 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 + + G E + R ++ L+ + + G+L A Sbjct: 68 SHQEVAHTGLTRLE-------DVSDMHARKARMAELADAFVALPGGA--GTLDEIFEAWT 118 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 42.2 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 22/90 (24%), Gaps = 12/90 (13%) Query: 7 WLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSIE- 61 + L I + +A + ++ G+ A +F ++ Sbjct: 699 LVALS-IRHVGPPTAFTLAKHFKTLDALADASAEELEQIDGIGAEIADSIATFFEEARMP 757 Query: 62 -----SSLCWLEQPNHHLIPADSEFYPPQL 86 L + + E P L Sbjct: 758 GNWRGRVLEAWKAAGVGMST-HDEGLPQTL 786 >UniRef50_Q3A147 Predicted Rossmann fold nucleotide-binding protein n=11 Tax=Desulfuromonadales RepID=Q3A147_PELCD Length = 342 Score = 42.2 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 26/141 (18%) Query: 107 SFQLAVVGSRAHSWY--GERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSI 164 ++ + GS + F LA +G + +G GI ++ A N ++ Sbjct: 74 RKKVTIFGSARTTSDSPIYEKCVRFARLLADKGYMVITGGGGGIMQAGNEGAGAENSFAV 133 Query: 165 AVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL--SKGV 222 N P ++ Q +++ Y F NR ++ L + V Sbjct: 134 -------NIRLPHEQET--NPVMSQSPNVIT--------YKYFF---NRKVAFLKEAAAV 173 Query: 223 LVVEAALRSGSLVTARCALEQ 243 + G+L A L Sbjct: 174 ALFPGGF--GTLDEAMETLTL 192 >UniRef50_C9DGI0 Putative GTP-binding protein n=1 Tax=Deftia phage phiW-14 RepID=C9DGI0_9CAUD Length = 131 Score = 42.2 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 33/149 (22%) Query: 108 FQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 +A+ GSR S ++ + + + G A G+D A + A V Sbjct: 2 KTVAITGSR--SIKDKQAVWHILDRVFPNDAMMIHGGAIGVDTFADEWAKSRGVP---VQ 56 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 G G + +G ++ RN + + V+ + Sbjct: 57 GYGAG----------WHKIGHKGAGMI----------------RNGFLVDKADEVISIWD 90 Query: 228 ALRSGSLVTARCALEQGREV--FALPGPI 254 +G+ A +Q ++ F +P + Sbjct: 91 GKSTGTADAVEKARKQRKKCVQFCIPPSV 119 >UniRef50_A4WHP9 Putative uncharacterized protein n=2 Tax=Pyrobaculum RepID=A4WHP9_PYRAR Length = 114 Score = 42.2 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 306 VALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 + L +L + P +AE +V T L LE G I PGG L Sbjct: 1 MNLQHYLVLEAISSG-IPPRKIAEILDLEPHDVETILNLLEEKGLIKRGPGGRYLLTEEG 59 >UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelagibacter RepID=UVRC_PELUB Length = 611 Score = 42.2 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRK 58 L I + + + +++ + G+ + A++ +F + Sbjct: 559 LDQIDGIGSIRKRALLNHFGSARAVESASFDEIKSVEGVEEKVAKKIYNFFHE 611 >UniRef50_C3PJ21 Putative uncharacterized protein n=8 Tax=Corynebacterium RepID=C3PJ21_CORA7 Length = 189 Score = 42.2 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 24/138 (17%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S + E LA R +T+ G G+ G+ + L G I V+ L + Sbjct: 15 SEAYSQAAHHLGEELARRNLTLVYGGGDVGLMGIVADSCLAAGGTVIGVIPRQL-VDYEL 73 Query: 178 RHARLAA-SLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVT 236 H R+ +++ +R + L+ + + + G+L Sbjct: 74 SHQRVTQLEVVDT------------------MAQRKTRMEELADAFVCLPGGV--GTLEE 113 Query: 237 ARCALEQGREVFALPGPI 254 L ++ + GP+ Sbjct: 114 LTEVLTLQ-QLGNIDGPV 130 >UniRef50_B8FFS3 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFS3_DESAA Length = 310 Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 65/224 (29%), Gaps = 31/224 (13%) Query: 167 LGNGLNTI--HPRRHARLAASLLEQGG----------------ALVSEFPLDV--PPLAY 206 L +GL I + +++ L G +++ Sbjct: 84 LHSGLGRIAAYIKQNHPDYNLALLTNGALFYLEDVRKDAAMTDLVIASIDAGSQEKFQQV 143 Query: 207 NFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQG---REVFALPGPIGN--PGSEG 261 N P N + + G+ V A RE+ + G I P Sbjct: 144 NRPHPNLTVPAMVDGLTAFRNEYSGQLWVEVFLAQGINDGDRELELIRGAIDRIKPDKVQ 203 Query: 262 PHWLIKQGAILVTEPE--EILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGD 319 + L + G P E LE + L A + + ++LA + Sbjct: 204 INTLDRPGTEDWVHPSSPETLERARAILGGEIIAKAAAASKETKALYNKE-EQILATIRR 262 Query: 320 EVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP---GGYVR 360 V +A+ G +V L LE AG + P G + R Sbjct: 263 RPCTVQDLAQALGMHEAQVRKHLAGLEQAGKVVLQPQTRGMFYR 306 >UniRef50_B1ZS72 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZS72_OPITP Length = 193 Score = 41.8 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 21/130 (16%) Query: 115 SRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNT 173 S +A RG + G + G+ G ++ G + V+ Sbjct: 12 SDRLDPKYYAAAEQLGREMAARGWGLVYGGGKTGLMGAVARSVKTGGGHVVGVIPE---- 67 Query: 174 IHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGS 233 + LA ++ +V+ R ++ + + + G+ Sbjct: 68 --FMKARELAYDEADELVTVVT------------MRERKLLMETRADAFVALPGGF--GT 111 Query: 234 LVTARCALEQ 243 L L Sbjct: 112 LEEMMEILTL 121 >UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistaceae RepID=D1B5F2_THEAS Length = 479 Score = 41.8 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 18/54 (33%), Gaps = 4/54 (7%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKS 59 L I + ++ ++ + L + G+ R A+R ++ Sbjct: 424 LEDIPGVGKAKASQLLSRFGSVRNVASASLDELASMRGIGERLAKRISDHLKEE 477 >UniRef50_B8CW27 Putative uncharacterized protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW27_HALOH Length = 187 Score = 41.8 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%) Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGV 162 +GSR + LA +G + SG + G D + V G Sbjct: 12 IGSRKTPQDIKDLMYQVSTQLAKKGYILRSGGSPGADDAFEYGVIDVGGK 61 >UniRef50_D2NQ58 Predicted transcriptional regulator n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NQ58_9MICC Length = 491 Score = 41.8 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 7/58 (12%), Positives = 19/58 (32%) Query: 296 NSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAA 353 + ++++ ++ + V +AE +V L +L G + Sbjct: 418 PPQRAEIPENLSPTESQVYVALTRGPATVADIAENTELSTRQVRYALPKLIQRGLVEQ 475 >UniRef50_B2A5L6 Crossover junction endodeoxyribonuclease ruvC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVC_NATTJ Length = 161 Score = 41.8 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 5/95 (5%) Query: 140 ITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLA-ASLLEQGGALVSEFP 198 I GL GI + G + L G+ + A S+ + L+SEF Sbjct: 2 IIMGLDPGI-AACGYGIIHAKGTKLECLACGVLRTYSDESATKRLESIYQGVSNLISEFS 60 Query: 199 LDVPPLAYNFPRRN---RIISGLSKGVLVVEAALR 230 + + F +N + G +KGVL++ AA Sbjct: 61 PNTVAVESLFFAKNSKTAMKVGQAKGVLMLAAAHN 95 >UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3237F Length = 647 Score = 41.8 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 4/53 (7%), Positives = 10/53 (18%) Query: 10 LMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIES 62 L S+ + + A ++ + I Sbjct: 592 LDSLPGVGPARKRALLKHFGSPEAFLAATREELEAVPGLPGKVARDLYVQINK 644 >UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkholderia cepacia complex RepID=B1K9C8_BURCC Length = 1518 Score = 41.8 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 3/88 (3%) Query: 269 GAILVTEPEEI--LENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANV-GDEVTPVD 325 GA L E + L L P + + + A + A + G +D Sbjct: 1018 GAALWVPVERLVCLRALHPDARATPALKVPAACAQPWEADAALVDVIRARLTGFGPLTLD 1077 Query: 326 VVAERAGQPVPEVVTQLLELELAGWIAA 353 +A G P + T L LE G++ Sbjct: 1078 AIAAPLGLPPASIATALAALEREGYVMR 1105 >UniRef50_B6JBR3 Transcriptional regulator, IclR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBR3_OLICO Length = 249 Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 17/48 (35%) Query: 318 GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 E + +A+R ++ L+ LE G I G L A Sbjct: 30 SAEPQTLAEIAQRTDLYKSTILRLLVTLEGRGLIVRWSDGRYALGPAA 77 >UniRef50_Q47Q00 Putative uncharacterized protein n=2 Tax=Nocardiopsaceae RepID=Q47Q00_THEFY Length = 118 Score = 41.4 bits (96), Expect = 0.049, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 1/73 (1%) Query: 298 FYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGG 357 ++ +L V V +A R P+ + L +L G++ Sbjct: 39 PQVGQPAELEPEHHAILE-VCAAPVSVAELASRTKLPLGVLRILLSDLLDGGYVMVHESQ 97 Query: 358 YVRLRRACHVRRT 370 + R R H RT Sbjct: 98 WQRRRPDVHTLRT 110 >UniRef50_A7VEK9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VEK9_9CLOT Length = 188 Score = 41.4 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 43/142 (30%), Gaps = 29/142 (20%) Query: 109 QLAVVG--SRAHSWYGERWGRLFCETLATRGVTITSG-LARGIDGVAHKAALQVNGVSIA 165 + + G S + LA RG T+ G ARG+ G A + A NG + Sbjct: 2 NICIFGASSNDIDQAYMDAVFNLGKKLAERGHTLVFGAGARGLMGAAARGASAGNGEIVG 61 Query: 166 VLGNGLN---TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGV 222 V N I+ + + +E R +I+ S Sbjct: 62 VAPTFFNVDGIIYDKCTE-----------LIRTE----------TMRERKQIMEDRSDAF 100 Query: 223 LVVEAALRSGSLVTARCALEQG 244 ++V + G+ L Sbjct: 101 IMVPGGI--GTFEEFFEVLTLK 120 >UniRef50_Q139D1 Putative uncharacterized protein n=3 Tax=Rhizobiales RepID=Q139D1_RHOPS Length = 199 Score = 41.4 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 19/112 (16%) Query: 119 SWYGERWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 + + + F + LA V++ G A G+ G A L G ++ L Sbjct: 18 NPHFIEAAQAFGKDLAESSVSLVYGGGAIGLMGAVANAVLDHGGTVTGIIPGFL------ 71 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 R +A +++ +V+ + R R++ S + + + Sbjct: 72 RTKEIALDRVQE--LIVT----------DDMHERKRLMFERSDAFVALPGGI 111 >UniRef50_B1N086 Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1N086_LEUCK Length = 184 Score = 41.4 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 22/128 (17%) Query: 119 SWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLNTIHPR 177 S Y + +T+A R + + G R G+ G+A ++A+ G + + N L Sbjct: 18 SSYI-TMAKQLGQTIAQRRLKMIYGGGRDGLMGIAARSAMAEGGEVVGISPNNL------ 70 Query: 178 RHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTA 237 A A ++ + + R R++ + + + G+L Sbjct: 71 --AEEAIAIDSVTKLI----------EVADMDERKRLLMAYADAFIALPGGF--GTLEEI 116 Query: 238 RCALEQGR 245 + + Sbjct: 117 AQVISWEK 124 >UniRef50_A7HDK6 Putative uncharacterized protein n=5 Tax=Bacteria RepID=A7HDK6_ANADF Length = 193 Score = 41.4 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 41/140 (29%), Gaps = 24/140 (17%) Query: 106 HSFQLAVVGSRAHSWYGE-RWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVS 163 + GS + R LA RG+ + G + G+ G AL++ G Sbjct: 1 MNRICVFCGSATGTNTLYAETARAVGRALARRGLGLVYGGGSVGLMGAVANGALELGGEV 60 Query: 164 IAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPL-AYNFPRRNRIISGLSKGV 222 V+ L A L GG + R ++ L+ Sbjct: 61 DGVIP-----------RALQARELAHGGL--------TRLHVVASMHERKAKMAELADAF 101 Query: 223 LVVEAALRSGSLVTARCALE 242 L + + G+L L Sbjct: 102 LALPGGM--GTLEELSEILT 119 >UniRef50_C0W647 GntR family transcriptional regulator protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W647_9ACTO Length = 255 Score = 41.4 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 6/83 (7%) Query: 288 HWLPDAPENSFYSPDQQDVALPFPELLANV------GDEVTPVDVVAERAGQPVPEVVTQ 341 P P + + LL + D +D +A V Sbjct: 2 SPTPVPQPAFEPIPARGLTDDVYDTLLDMLTSGVFEPDAPLYIDRLARSLQVSPTPVREA 61 Query: 342 LLELELAGWIAAVPGGYVRLRRA 364 L LE G I+ R+ Sbjct: 62 LARLESTGLISRTTRRGYRVAPP 84 >UniRef50_UPI0001B4DEBE hypothetical protein ShygA5_39730 n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4DEBE Length = 125 Score = 41.4 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 20/52 (38%) Query: 304 QDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVP 355 ++ +L PV +A +G P+ V L +L G I A P Sbjct: 51 PVLSPEQAAILHLCRPRPHPVADIASDSGLPLAVVRVLLSDLLAMGLIRATP 102 >UniRef50_C4NTC6 Putative uncharacterized protein n=2 Tax=unclassified N4-like viruses RepID=C4NTC6_9CAUD Length = 182 Score = 41.4 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 49/159 (30%), Gaps = 27/159 (16%) Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGV----AHKAALQVNGVS--IAV 166 +GSR R T+A G + SG A G D AA ++N IA Sbjct: 9 IGSRETPEDVCRKMFAAGRTMAKLGFILRSGGAAGADEAFELGVADAASELNVSIREIA- 67 Query: 167 LGNGLNTIHP----RRHARLAASLLEQGGALVSEFPLDVP---PLAYNFPRRNRIIS--- 216 P R++ ++ LV EF + P +F RN Sbjct: 68 -----EIYLPWKGFRKNQSPLYGSCKRSRLLVKEFHPNWANVSPAGRDFHGRNCYQILGK 122 Query: 217 --GLSKGVLVVE---AALRSGSLVTARCALEQGREVFAL 250 ++ A+ G+ R A E G + Sbjct: 123 ELDSPSAFVLCWTKDGAITGGTGQALRVAQEYGIPILNF 161 >UniRef50_C6MUI9 Putative uncharacterized protein n=1 Tax=Geobacter sp. M18 RepID=C6MUI9_9DELT Length = 550 Score = 41.4 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 41/177 (23%) Query: 101 ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATR-----GVTITSGLARGIDGVAHKA 155 + L S A++GSR Y E + L+ T+ S LA G D + A Sbjct: 22 DTAPLRSCVEAILGSR----YKEALTLEAGKELSRAIHTPIAFTVISPLAEGADRMVANA 77 Query: 156 ALQVNGVSIAVLGNGLNTIHPRRHARLAAS-------------LLEQGGALVSEFPLDVP 202 ++ G L + P + L + VSE D Sbjct: 78 VIENGGT--------LEVVLPMQQEEYEKDFSSAASRSEFADLLKQARRVTVSEI--DGN 127 Query: 203 PLAYNFPRRNRIISGL-----SKGVLVVEAALRS----GSLVTARCALEQGREVFAL 250 P A +F ++ + +G ++ + S G+ AL++ + VF + Sbjct: 128 PTAADFRKKAYLRAGQQTVECCDILIALWDGEPSHGTGGTAEIIAFALQRKKPVFIV 184 >UniRef50_C6VZZ2 Putative uncharacterized protein n=2 Tax=Flexibacteraceae RepID=C6VZZ2_DYAFD Length = 198 Score = 41.4 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 21/120 (17%) Query: 124 RWGRLFCETLATRGVTIT-SGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARL 182 + LA R + + G G+ G A+ G ++ N L Sbjct: 20 EAAYAIGKALAERNIKLIYGGGNLGLMGRVADGAMDQGGFVTGIIPNFLAK--------- 70 Query: 183 AASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALE 242 LE +SE R + +S GV+ + G+L L Sbjct: 71 ----LEVAHKTLSELHF-----VETMHERKAKMVSMSDGVIALPGGY--GTLDELFEILT 119 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 41.4 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 6/73 (8%) Query: 5 EIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQT----GLTLRQAQRFLSFPRKSI 60 I + L I + +A W I + ++ G+ A L + Sbjct: 600 RILVALS-IRHVGPVAARALAGWFGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDW 658 Query: 61 ESSL-CWLEQPNH 72 + + Sbjct: 659 HREIVDRWRKAGV 671 >UniRef50_A4YF25 Rossmann fold nucleotide-binding protein-like protein n=11 Tax=Sulfolobaceae RepID=A4YF25_METS5 Length = 172 Score = 41.4 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 24/138 (17%) Query: 117 AHSWYGERWGRLFCETLATRGVTI-TSGLARGIDGVAHKAALQVNGVSIAVLGNGLNT-I 174 + R F T+ + G G+ V A++ + ++ G I Sbjct: 11 EPKDELKEKARRFVSTMTRCNRQVFILGGYWGLMAVVVDEAVRDGHKVVTIIPEGAEHVI 70 Query: 175 HPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSL 234 P V P R+ I+ ++V +G++ Sbjct: 71 TPSE---------------VIRIDTGCDPR-----CRSVFIARSGD--ILVSLGGETGTM 108 Query: 235 VTARCALEQGREVFALPG 252 A G+ V+ L G Sbjct: 109 TEIMMAYAMGKSVYVLTG 126 >UniRef50_D2RIJ2 Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RIJ2_ACIFE Length = 179 Score = 41.4 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 30/136 (22%) Query: 114 GSRAHSWYGERWGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 G+R R+ +A G T+ G +R G+ G AL+ G I V Sbjct: 12 GNR---PEYARYAYELGRWIAIHGHTLVYGGSRTGLMGNLADGALEQGGRVIGV------ 62 Query: 173 TIHPRRHARLAASLLEQGG---ALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAAL 229 L+ G +V+E N +R + + L L + Sbjct: 63 -----EPRFFMEKELQHEGLTELIVTE----------NMAQRKQKMLELGDLFLAFPGGI 107 Query: 230 RSGSLVTARCALEQGR 245 G+L + + Sbjct: 108 --GTLEEISEIMSLNK 121 >UniRef50_Q1AS97 Putative transcriptional regulator n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS97_RUBXD Length = 216 Score = 41.4 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 2/54 (3%) Query: 312 ELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRAC 365 ++ + VD +A G V L LE G + GG VR R Sbjct: 16 RIVVLLRRASRRVDELARELGLTDNAVRAHLAALERDGVVRQ--GGTVRRGRGA 67 >UniRef50_Q31K69 Putative uncharacterized protein n=3 Tax=Synechococcus elongatus RepID=Q31K69_SYNE7 Length = 236 Score = 41.1 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 25/132 (18%) Query: 104 ALHSFQLAVVGSRA--HSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQV-- 159 F + + GS + + + L G I +G G+ A+ ++ Sbjct: 38 PHDRFCVCIFGSARLMADNPVYQDVQWLAQELTYLGCDIVTGGGPGLMEAANAGSVSADP 97 Query: 160 NGVSIAVLGNGLNTIHPRRHA--RLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISG 217 + +V GL P L E NF R Sbjct: 98 ENRTRSV---GLRIDLPHEQGSNPYVEELYEH----------------SNFFSRLHHFVL 138 Query: 218 LSKGVLVVEAAL 229 + +V+ + Sbjct: 139 EADAFVVMPGGI 150 >UniRef50_C6IIP2 Lysine decarboxylase n=9 Tax=Bacteroides RepID=C6IIP2_9BACE Length = 177 Score = 41.1 bits (95), Expect = 0.067, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 17/127 (13%) Query: 108 FQLAVVGSR--AHSWYGERWGRLFCETLATRGVTITSGLA-RGIDGVAHKAALQVNGVSI 164 ++ + S R E + G T+ G A G+ +A + G I Sbjct: 2 KKIGIFCSASENIDKMYFDSARQIGEWMGKAGKTLIYGGANLGLMECVARAVKENGGTVI 61 Query: 165 AVLG----------NGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRI 214 V+ L+ + R+ ++ + ++ P V L F + Sbjct: 62 GVVPAKLEEKGSVSTLLDEVIHTRNLSDRKDVITEKSEILVALPGGVGTLDEIFH----V 117 Query: 215 ISGLSKG 221 I+ S G Sbjct: 118 IAAASIG 124 >UniRef50_Q7CRC7 Transcriptional regulator, ArsR family n=4 Tax=Alphaproteobacteria RepID=Q7CRC7_AGRT5 Length = 118 Score = 41.1 bits (95), Expect = 0.068, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%) Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR 360 +LA +G PV ++ G +P V+ L LE AG I G VR Sbjct: 22 DPTRRAILARLGGGPAPVMELSAPTGLRLPTVMRHLSVLEEAGLIITSKDGRVR 75 >UniRef50_B4WC22 IclR helix-turn-helix domain family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WC22_9CAUL Length = 257 Score = 41.1 bits (95), Expect = 0.071, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 308 LPFPELLANVG--DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRR 363 ++L + E ++ G+ V E+ + LE G+I P GY R Sbjct: 18 EKGLDVLELLSAQGEPMTPSQMSVTLGRSVSELFRMIQVLEFRGYIEQSPDGYRLTNR 75 >UniRef50_A3CUK2 Putative transcriptional regulator n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CUK2_METMJ Length = 523 Score = 41.1 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 319 DEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVF 373 D +AERA V QL LE G++ + P +R + R +F Sbjct: 302 DTPLTPKDIAERARLNPATVTAQLRRLEADGYVVSRPM----RKRTSYEVRDRLF 352 >UniRef50_A2SND8 Putative phage protein n=3 Tax=Proteobacteria RepID=A2SND8_METPP Length = 184 Score = 41.1 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 44/156 (28%), Gaps = 25/156 (16%) Query: 113 VGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLN 172 +GSR + + LA RG + SG A G D A + I + G N Sbjct: 13 IGSRKTPGAVIQLMQGIARRLAARGFVLRSGGADGADLAFETGAGE-GPKEIYLPWRGFN 71 Query: 173 ----TIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIIS-----GLSKGVL 223 T+ ++ AA + + + P RN + Sbjct: 72 GSRSTLFNLTNSDAAAEIAAT----IHPAWPRLKPSVQGLHTRNVYQVLGQDLASPSQFV 127 Query: 224 VVE-----------AALRSGSLVTARCALEQGREVF 248 V +A G+ A +G V Sbjct: 128 VCWTPDGAQTEQERSAETGGTGTAIALANRRGVPVI 163 >UniRef50_D0WJH2 Decarboxylase family protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJH2_9ACTN Length = 204 Score = 40.7 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 125 WGRLFCETLATRGVTITSGLAR-GIDGVAHKAALQVNGVSIAVLGNGLN 172 F + +A RG + G G+ GV +A G + V+ +GL+ Sbjct: 44 AACSFGQAMAARGHALVFGGYDTGLMGVVARAVHDAGGRVVGVVPSGLD 92 >UniRef50_Q67KW5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KW5_SYMTH Length = 194 Score = 40.7 bits (94), Expect = 0.090, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 22/145 (15%) Query: 109 QLAVVG-SRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVL 167 ++ V+G S S + RG + +G G+ A + A GV++ +L Sbjct: 3 RIGVIGQSGPISEELRAAAFAVGRAVGARGALLFTGGRDGVMAAASQGAQSAGGVTVGIL 62 Query: 168 GNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEA 227 L E + + R+ ++ ++V Sbjct: 63 PG--------------DDLREANPYVTVPVTTGL-----TMVGRSEVLVHAVDACIIVGG 103 Query: 228 ALRSGSLVTARCALEQGREVFALPG 252 G+L A + + AL G Sbjct: 104 GA--GTLAEIAVAYLYRKPLVALRG 126 >UniRef50_C1XZC0 Putative uncharacterized protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZC0_9DEIN Length = 269 Score = 40.7 bits (94), Expect = 0.092, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 282 NLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVG-DEVTPVDVVAERAGQPVPEVVT 340 + + L + + +L + V + + G + +V Sbjct: 189 HTRPEDLPLRQQEPVRQGVSEIPRLNGSEQAVLRFLQQRGHAQVAELMQHLGVSLMQVGE 248 Query: 341 QLLELELAGWIAAVPGGY 358 LE G I GG+ Sbjct: 249 VCATLEARGLIRRRDGGW 266 >UniRef50_A0B6S9 Transcriptional regulator, ArsR family n=1 Tax=Methanosaeta thermophila PT RepID=A0B6S9_METTP Length = 204 Score = 40.7 bits (94), Expect = 0.097, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%) Query: 307 ALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG----GYVRLR 362 +L + + +A+R V+ L LE AG I Y RL Sbjct: 12 NENRRRILQLLSFRPFYFNEIAKRLDVGPKAVIDHLGVLEAAGLIECYRDERRRKYFRLA 71 Query: 363 R 363 R Sbjct: 72 R 72 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.149 0.411 Lambda K H 0.267 0.0457 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,469,130,234 Number of Sequences: 3077464 Number of extensions: 124362288 Number of successful extensions: 413487 Number of sequences better than 1.0e-01: 890 Number of HSP's better than 0.1 without gapping: 1930 Number of HSP's successfully gapped in prelim test: 458 Number of HSP's that attempted gapping in prelim test: 406619 Number of HSP's gapped (non-prelim): 2566 length of query: 374 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 244 effective length of database: 640,326,036 effective search space: 156239552784 effective search space used: 156239552784 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.7 bits)