62 d1upsa1 Probab=71.71   E-value=5.5  Score=17.43  Aligned_columns=204  Identities=18%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC------HHHEEECCCCCCCEEEEECCCCEEEEECCCCCCCC---------------
Q ss_conf             346666554455410335777778------21188537876552665515877999157777655---------------
Q batch____       318 PQVAEQPAAVPGNWRDDFDASSLD------PELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNST---------------  376 (536)
Q Consensus       318 ~~~~~~~~~~~~~~~DdF~~~~L~------~~W~~~~~P~d~~~~sl~~~~G~LrL~~~~~~~~~---------------  376 (536)
                      |..+..+.-....|+|+|++..|+      ..+..............+..+|.|.|......+..               
T Consensus         3 p~~p~~~~gw~l~f~DeFd~~~ld~~~W~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~   82 (266)
T d1upsa1           3 PANPIEKAGYKLDFSDEFNGPTLDREKWTDYYLPHWCKDPESAKANYRFENGSLVEYITEDQKPWCPEHDGTVRSSAIMS   82 (266)
T ss_dssp             CCCCSSCTTEEEEEEECCCCSSCCTTTCBSBSSGGGCSSGGGGBCEEEEETTEEEEEECTTCCCSCHHHHTTCEEEEEES
T ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEC
T ss_conf             78799744758999842789976731266885688678755553214878996999981666656655551589535541


Q ss_pred             -------------CCCEEEEEECCCCEE-EEEEEEEECCCCCCCEEEEEEEECCCCCE---------EEEE-EEECCCCE
Q ss_conf             -------------674079996228708-99999996467667401499998176718---------9999-99579955
Q batch____       377 -------------FTQSTVARRWQHFAF-RAETRMEFSPVHFQQSAGLTCYYNSKNWS---------YCFV-DYEEGQGR  432 (536)
Q Consensus       377 -------------~~~~~L~qr~~~~~~-~~~~~l~~~~~~~g~~AGL~v~~d~~~~~---------~~~v-~~~~~~~~  432 (536)
                                   .+.....+......+ .+|+++.+.....|....+-++.......         -|.| +.......
T Consensus        83 ~~~~~~~~~~~~~~s~~~~~~~~~~~~yG~~E~Rak~p~~g~G~~pafWl~~~~~~~~~~~~~~~~gEIDI~E~~g~~~~  162 (266)
T d1upsa1          83 FDKSWIHNFSGTTDNHERNEWRGYTTKYGYFEIRAKLSNTGGGGHQAWWMVGMQDDTNDWFNSKQTGEIDILETFFSKKD  162 (266)
T ss_dssp             EECTTCCCTTCCSCCCCCCCEESSCBSSEEEEEEEECCCCCSSCEEEEEEEECCTTTSSSTTCSCCCEEEEECCBTTCTT
T ss_pred             CCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf             67666565311678302314676310011899999806778855788996415777776678755403779955568664


Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCC-----CCEEEEEEEEECCEEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCEE
Q ss_conf             99999940777665310257851478-----8728999999789799999956972498125323345304344763104
Q batch____       433 TIKVIQLDHNVPSWPLHEQPIPVPEH-----AESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFF  507 (536)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~LRi~~~~~~~~f~yS~DG~~w~~lg~~~~~~~l~~~~~~~~~~F  507 (536)
                      .+........................     .+=-..+++-+.+..+|+  .||+.+..+-...+.-+.           
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HtY~~~W~p~~i~~y--vDG~~v~t~~~~~~~p~~-----------  229 (266)
T d1upsa1         163 TWRIAAYGWNDPNFQTSWTISEDKVPSGDPTSEYHIYAMEWTPTALKFY--YDNELFKVIYGSPDYEMG-----------  229 (266)
T ss_dssp             EEEEEEECTTCTTSCSSCEEEEEECSSSCTTTSCEEEEEEECSSEEEEE--ETTEEEEEEECCCCSCEE-----------
T ss_pred             EEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCEEEEE--ECCEEEEEEECCCCCCEE-----------
T ss_conf             4899898278788633632000250468763352899999959989999--999799988378988758-----------


Q ss_pred             EEEEEEEEEECCCCCCE-----EEEEEEEE-EEEC
Q ss_conf             46799999845888860-----79999999-9749
Q batch____       508 TGAFVGLHCEDISGDGC-----YADFDYFT-YEPV  536 (536)
Q Consensus       508 tG~~~Glfa~~~~~~~~-----~AdFd~f~-~~~~  536 (536)
                        ..+.|...+..+...     .-++||+| |+++
T Consensus       230 --liln~~~~~~~~~~~~~~p~~m~VDyVRvyq~~  262 (266)
T d1upsa1         230 --TILNIYTDAGSGAHNDVWPKEWAIDYMRVWKPV  262 (266)
T ss_dssp             --EEEEEEESBTTBCCCSCCCEEEEEEEEEEEEET
T ss_pred             --EEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEC
T ss_conf             --999962207888777778817899899999742