50 c1upsB_ Probab=91.04   E-value=0.83  Score=22.18  Aligned_columns=205  Identities=17%

Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCC-HHHE------EECCCCCCCEEEEECCCCEEEEECCCCCC--------------
Q ss_conf             30346666554455410335777778-2118------85378765526655158779991577776--------------
Q batch____       316 KGPQVAEQPAAVPGNWRDDFDASSLD-PELQ------TLRIPFDDTLGSLTARPGFLRLYGNDSLN--------------  374 (536)
Q Consensus       316 ~~~~~~~~~~~~~~~~~DdF~~~~L~-~~W~------~~~~P~d~~~~sl~~~~G~LrL~~~~~~~--------------  374 (536)
                      ..|..+..+.-..+.|+|+|++++|+ ..|.      |...+ ...........|.|.|.......              
T Consensus         1 d~p~~P~~~~Gw~LVfsDEFdG~sLD~sKW~~~~~~~w~~~~-~~~~~n~~~enG~Lvl~~~~~~~~~~~~~dG~l~~~~   79 (397)
T c1upsB_           1 DFPANPIEKAGYKLDFSDEFNGPTLDREKWTDYYLPHWCKDP-ESAKANYRFENGSLVEYITEDQKPWCPEHDGTVRSSA   79 (397)
T ss_dssp             CCCCCCSSCTTEEEEEEECCCCSSCCTTTCBCBSSGGGCSSG-GGGBCCEEEETTEEEEEECTTCCCSCHHHHTTCEEEE
T ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCHHHCCEEECCCCCCCC-CCCCCEEEEECCEEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf             987889875585899872378986470106000258864763-2231003510885999973766653223576159978


Q ss_pred             --------------CCCCCEEEEEECCCCEE-EEEEEEEECCCCCCCEEEEEEEECCCCCE---------EEEEEEECCC
Q ss_conf             --------------55674079996228708-99999996467667401499998176718---------9999995799
Q batch____       375 --------------STFTQSTVARRWQHFAF-RAETRMEFSPVHFQQSAGLTCYYNSKNWS---------YCFVDYEEGQ  430 (536)
Q Consensus       375 --------------~~~~~~~L~qr~~~~~~-~~~~~l~~~~~~~g~~AGL~v~~d~~~~~---------~~~v~~~~~~  430 (536)
                                    ...+....+.+.....+ .+|++..+.....|--.-+-++.+++.+.         -|.|.-.-+.
T Consensus        80 ~~~~~~~~~~~~sg~~~S~~~~t~~~FsfkYGriEvRAKlP~~G~G~WPAfWmlp~~~~~~~w~~wp~sGEIDImE~~G~  159 (397)
T c1upsB_          80 IMSFDKSWIHNFSGTTDNHERNEWRGYTTKYGYFEIRAKLSNTGGGGHQAWWMVGMQDDTNDWFNSKQTGEIDILETFFS  159 (397)
T ss_dssp             EESEECTTCCCTTCCSCCCCCCCEESSCBSSEEEEEEEECCCCCSSCEEEEEEEECCTTTSSSTTCSCCCEEEEECCBTT
T ss_pred             EECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf             85377766454321146043015666320253899999658778861026660367666666666777631578973278


Q ss_pred             CEEEEEEEE-----CCCCCCCCCEEEEEECCCCCCEEE-EEEEEECCEEEEEEEECCCCEEECCCCEEEEEEECCCCCCC
Q ss_conf             559999994-----077766531025785147887289-99999789799999956972498125323345304344763
Q batch____       431 GRTIKVIQL-----DHNVPSWPLHEQPIPVPEHAESVW-LRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGR  504 (536)
Q Consensus       431 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~-LRi~~~~~~~~f~yS~DG~~w~~lg~~~~~~~l~~~~~~~~  504 (536)
                      .........     ..............+.....++-+ ..|+=+....+||  .||+.+.++-..-+--+.        
T Consensus       160 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~d~s~dFHtY~vEWtp~~I~fY--VDg~~y~t~~~~p~~p~~--------  229 (397)
T c1upsB_         160 KKDTWRIAAYGWNDPNFQTSWTISEDKVPSGDPTSEYHIYAMEWTPTALKFY--YDNELFKVIYGSPDYEMG--------  229 (397)
T ss_dssp             CTTEEEEEEECTTCTTSCSSCEEEEEECSSSCTTTSCEEEEEEECSSEEEEE--ETTEEEEEEECCCCSCEE--------
T ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEEE--ECCEEEEEEECCCCCCEE--------
T ss_conf             7762489997158888775544444334068755674489999449959999--999799999778982389--------


Q ss_pred             CEEEEEEEEEEEECCCCCCEE-----EEEEEEE-EEEC
Q ss_conf             104467999998458888607-----9999999-9749
Q batch____       505 GFFTGAFVGLHCEDISGDGCY-----ADFDYFT-YEPV  536 (536)
Q Consensus       505 ~~FtG~~~Glfa~~~~~~~~~-----AdFd~f~-~~~~  536 (536)
                           .++-|.--+..+....     ..+||+| ||||
T Consensus       230 -----lilN~avgg~~~~~~~~fP~~m~VDYVRVYq~~  262 (397)
T c1upsB_         230 -----TILNIYTDAGSGAHNDVWPKEWAIDYMRVWKPV  262 (397)
T ss_dssp             -----EEEEEEESBTTBCCCSCCCEEEEEEEEEEEEET
T ss_pred             -----EEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEC
T ss_conf             -----999998427888887775755798499997317