BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (81 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75970 Excisionase-like protein from lambdoid prophage ... 167 1e-40 UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2L... 114 7e-25 UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 Rep... 75 5e-13 UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 64 2e-09 UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR 62 4e-09 UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X... 62 4e-09 UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae Re... 59 5e-08 UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsie... 57 1e-07 UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea... 52 6e-06 UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subs... 49 4e-05 UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=... 47 1e-04 UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 46 4e-04 UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralston... 45 6e-04 UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae ... 45 0.001 >UniRef50_P75970 Excisionase-like protein from lambdoid prophage 14 n=5 Tax=Enterobacteriaceae RepID=VXIS_ECOLI Length = 81 Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP Sbjct: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 VIKKNDSLLLQRILSNGSQTA Sbjct: 61 VIKKNDSLLLQRILSNGSQTA 81 >UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2LMD4_PROMI Length = 89 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 51/80 (63%), Positives = 65/80 (81%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPV 61 +QMLTLEEWA E+Y+S PP + TL+RYA+ LF PPA K+G +WRVREDA+LVG L +PV Sbjct: 10 MQMLTLEEWAQERYKSRPPKLGTLQRYARGGLFYPPARKEGGIWRVREDADLVGNLTSPV 69 Query: 62 IKKNDSLLLQRILSNGSQTA 81 I ND+L+LQRIL +G QT+ Sbjct: 70 INNNDNLILQRILKDGCQTS 89 >UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 RepID=B4EVG7_PROMH Length = 83 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/81 (45%), Positives = 51/81 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++LE WA ++ PS++ L++YA+ NL PPAMK GR W V +A VG L P Sbjct: 1 MSRMVSLEAWAMLEFGEESPSITVLQKYARNNLIAPPAMKVGRKWMVDREARYVGYLSLP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 I + LQRI+S+G QTA Sbjct: 61 KIPTKSTERLQRIISDGCQTA 81 >UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 Length = 78 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 48/77 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++TL++WA E++ PS L++YA+ + PPA+K GR W + ++ VG L P Sbjct: 1 MSRLITLQDWAKEEFGDLAPSERVLKKYAQGKMMAPPAIKVGRYWMIDRNSRFVGTLAEP 60 Query: 61 VIKKNDSLLLQRILSNG 77 + N + LQRI+++G Sbjct: 61 QLPINANPKLQRIIADG 77 >UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR Length = 75 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 45/75 (60%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIK 63 M++LE WA ++ + PS L +YAK N+ PPA+K G+ W V D+ VG + P + Sbjct: 1 MVSLEAWAKLEFGDDAPSKQVLLKYAKANMMVPPALKVGKKWMVDRDSRWVGIVSKPQLP 60 Query: 64 KNDSLLLQRILSNGS 78 + LQRILS+GS Sbjct: 61 NCSNDKLQRILSDGS 75 >UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X6U6_KLEPN Length = 78 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 49/78 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++L EWA +++ S PS L++YAK + PP M+ GR W V ++A +G + P Sbjct: 1 MSRMVSLLEWAKDEFGSEAPSERVLKKYAKGQMIAPPPMRVGRRWMVDKEARFIGVVAEP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + + + L+RI+S+GS Sbjct: 61 QLPIHVNPKLRRIISDGS 78 >UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae RepID=B7LHK4_ECO55 Length = 82 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++ L EWA E++ P+ STL +YAK + P K GR WRV A VG + P Sbjct: 1 MARLILLTEWAKEEFSEPVPTPSTLSKYAKAGMIFPLPKKVGRRWRVDPQARFVGMVNKP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + D L+RIL +G+ Sbjct: 61 EVIATDHPALKRILEDGA 78 >UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XR65_KLEP3 Length = 85 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 6/85 (7%) Query: 1 MLQMLTLEEWAA-EKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 M Q+++LE+WA+ +PPS ++L R AK P A+K GR W + EDA+ +G + + Sbjct: 1 MGQLVSLEDWASGPNGFKHPPSRASLHRIAKTGQTIPRALKLGRRWVIDEDAKFIGLITS 60 Query: 60 PVI----KKNDSLLLQRILSNGSQT 80 PV+ K L++R++ NGSQT Sbjct: 61 PVLPPRMPKAVKTLMERVI-NGSQT 84 >UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q8H4_9ENTR Length = 87 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Query: 1 MLQMLTLEEWA----AEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGE 56 M Q++ + EWA KY PP+ TL YAK P +KQGR W V E+A+ +G Sbjct: 1 MAQLIPIGEWANGPNGFKY---PPNSVTLSVYAKTGQIYPQPIKQGRRWVVDENAKFIGV 57 Query: 57 LVTPVIKKNDS----LLLQRILSNGSQT 80 P I N S LL++++ NGSQT Sbjct: 58 QAKPDIPTNVSRPARALLEKVI-NGSQT 84 >UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLQ4_YERE8 Length = 89 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 32/51 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDA 51 M ++LTLEEWA E YRS P+ TL+R+A+ P K GR +RV+ A Sbjct: 1 MTKLLTLEEWAEETYRSKQPTPQTLQRWARGGNIYPAPEKHGREYRVQPGA 51 >UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=Q88MN8_PSEPK Length = 80 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKK 64 +TL+EWA + +R+ PPS +TLRR+A++ L P +K GR + V DA P + Sbjct: 4 VTLDEWAHDHFRT-PPSSNTLRRWAREGLITPAPVKHGRSYYVEADACYREPEPLPRVPV 62 Query: 65 NDSLLLQRILSN--GSQTA 81 S L+ RI S G+Q A Sbjct: 63 G-SPLVNRIASARYGAQAA 80 >UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 Length = 82 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M LT+ WA + Y PP V T+RR+ ++ P + GR +R++ DA + P Sbjct: 1 MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQP 60 Query: 61 VIKKNDS----LLLQRILSNGSQ 79 + + LL+R L NG + Sbjct: 61 TVPDGTAASTPTLLER-LKNGPK 82 >UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum IPO1609 RepID=B5SJ98_RALSO Length = 69 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGEL 57 ++L +W A + PP +STLR +A+Q PP MK GR + V E+A V E+ Sbjct: 3 ISLAKWGARNF-DPPPHISTLRAWARQGKIYPPPMKVGRAYYVDENAVHVSEI 54 >UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae RepID=C8TT64_ECO26 Length = 93 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 31/53 (58%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELV 54 + ++TL+ W +Y NPPS+STLRR+A+ P GR +RV +A + Sbjct: 1 MNLVTLKTWGKLRYPDNPPSISTLRRWARNGNIYPAPELHGRSYRVVPEAFYI 53 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75970 Excisionase-like protein from lambdoid prophage ... 117 8e-26 UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2L... 117 9e-26 UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 Rep... 116 3e-25 UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 114 1e-24 UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X... 112 4e-24 UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR 108 5e-23 UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae Re... 103 1e-21 UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea... 92 6e-18 UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsie... 91 1e-17 UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 90 3e-17 UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=... 87 2e-16 UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subs... 82 5e-15 UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae ... 79 3e-14 UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralston... 70 2e-11 Sequences not found previously or not previously below threshold: UniRef50_D0YDC4 Excisionase domain protein n=1 Tax=Klebsiella va... 65 5e-10 UniRef50_A6WME6 Excisionase, putative n=1 Tax=Shewanella baltica... 65 6e-10 UniRef50_C5CJK0 Excisionase domain protein n=1 Tax=Variovorax pa... 62 5e-09 UniRef50_D0L1C5 Putative uncharacterized protein n=1 Tax=Halothi... 59 6e-08 UniRef50_C8TPJ6 Excisionase n=47 Tax=Enterobacteriaceae RepID=C8... 57 1e-07 UniRef50_Q0BCZ7 Putative uncharacterized protein n=1 Tax=Burkhol... 53 3e-06 UniRef50_B2JXJ9 Excisionase domain protein n=1 Tax=Burkholderia ... 52 8e-06 UniRef50_B4ESJ3 Excisionase n=2 Tax=Proteus mirabilis RepID=B4ES... 47 3e-04 UniRef50_P68926 Excisionase n=15 Tax=root RepID=VXIS_BP434 44 0.002 UniRef50_B6XIJ4 Putative uncharacterized protein n=1 Tax=Provide... 42 0.005 UniRef50_A1TZX5 Putative uncharacterized protein n=1 Tax=Marinob... 41 0.012 >UniRef50_P75970 Excisionase-like protein from lambdoid prophage 14 n=5 Tax=Enterobacteriaceae RepID=VXIS_ECOLI Length = 81 Score = 117 bits (294), Expect = 8e-26, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP Sbjct: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 VIKKNDSLLLQRILSNGSQTA Sbjct: 61 VIKKNDSLLLQRILSNGSQTA 81 >UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2LMD4_PROMI Length = 89 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 51/80 (63%), Positives = 65/80 (81%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPV 61 +QMLTLEEWA E+Y+S PP + TL+RYA+ LF PPA K+G +WRVREDA+LVG L +PV Sbjct: 10 MQMLTLEEWAQERYKSRPPKLGTLQRYARGGLFYPPARKEGGIWRVREDADLVGNLTSPV 69 Query: 62 IKKNDSLLLQRILSNGSQTA 81 I ND+L+LQRIL +G QT+ Sbjct: 70 INNNDNLILQRILKDGCQTS 89 >UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 RepID=B4EVG7_PROMH Length = 83 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 37/81 (45%), Positives = 51/81 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++LE WA ++ PS++ L++YA+ NL PPAMK GR W V +A VG L P Sbjct: 1 MSRMVSLEAWAMLEFGEESPSITVLQKYARNNLIAPPAMKVGRKWMVDREARYVGYLSLP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 I + LQRI+S+G QTA Sbjct: 61 KIPTKSTERLQRIISDGCQTA 81 >UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 Length = 78 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 48/78 (61%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++TL++WA E++ PS L++YA+ + PPA+K GR W + ++ VG L P Sbjct: 1 MSRLITLQDWAKEEFGDLAPSERVLKKYAQGKMMAPPAIKVGRYWMIDRNSRFVGTLAEP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + N + LQRI+++G Sbjct: 61 QLPINANPKLQRIIADGC 78 >UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X6U6_KLEPN Length = 78 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 49/78 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++L EWA +++ S PS L++YAK + PP M+ GR W V ++A +G + P Sbjct: 1 MSRMVSLLEWAKDEFGSEAPSERVLKKYAKGQMIAPPPMRVGRRWMVDKEARFIGVVAEP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + + + L+RI+S+GS Sbjct: 61 QLPIHVNPKLRRIISDGS 78 >UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR Length = 75 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIK 63 M++LE WA ++ + PS L +YAK N+ PPA+K G+ W V D+ VG + P + Sbjct: 1 MVSLEAWAKLEFGDDAPSKQVLLKYAKANMMVPPALKVGKKWMVDRDSRWVGIVSKPQLP 60 Query: 64 KNDSLLLQRILSNGS 78 + LQRILS+GS Sbjct: 61 NCSNDKLQRILSDGS 75 >UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae RepID=B7LHK4_ECO55 Length = 82 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++ L EWA E++ P+ STL +YAK + P K GR WRV A VG + P Sbjct: 1 MARLILLTEWAKEEFSEPVPTPSTLSKYAKAGMIFPLPKKVGRRWRVDPQARFVGMVNKP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + D L+RIL +G+ Sbjct: 61 EVIATDHPALKRILEDGA 78 >UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q8H4_9ENTR Length = 87 Score = 92.0 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 1 MLQMLTLEEWA-AEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 M Q++ + EWA PP+ TL YAK P +KQGR W V E+A+ +G Sbjct: 1 MAQLIPIGEWANGPNGFKYPPNSVTLSVYAKTGQIYPQPIKQGRRWVVDENAKFIGVQAK 60 Query: 60 PVIKKNDS----LLLQRILSNGSQT 80 P I N S LL++++ NGSQT Sbjct: 61 PDIPTNVSRPARALLEKVI-NGSQT 84 >UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XR65_KLEP3 Length = 85 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 6/86 (6%) Query: 1 MLQMLTLEEWAA-EKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 M Q+++LE+WA+ +PPS ++L R AK P A+K GR W + EDA+ +G + + Sbjct: 1 MGQLVSLEDWASGPNGFKHPPSRASLHRIAKTGQTIPRALKLGRRWVIDEDAKFIGLITS 60 Query: 60 PVI----KKNDSLLLQRILSNGSQTA 81 PV+ K L++R++ NGSQT Sbjct: 61 PVLPPRMPKAVKTLMERVI-NGSQTT 85 >UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 Length = 82 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M LT+ WA + Y PP V T+RR+ ++ P + GR +R++ DA + P Sbjct: 1 MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQP 60 Query: 61 VIKKNDS----LLLQRILSNGSQ 79 + + LL+R L NG + Sbjct: 61 TVPDGTAASTPTLLER-LKNGPK 82 >UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=Q88MN8_PSEPK Length = 80 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKK 64 +TL+EWA + +R+ PPS +TLRR+A++ L P +K GR + V DA P + Sbjct: 4 VTLDEWAHDHFRT-PPSSNTLRRWAREGLITPAPVKHGRSYYVEADACYREPEPLPRVPV 62 Query: 65 NDSLLLQRILSN--GSQTA 81 S L+ RI S G+Q A Sbjct: 63 G-SPLVNRIASARYGAQAA 80 >UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLQ4_YERE8 Length = 89 Score = 82.0 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELV-- 58 M ++LTLEEWA E YRS P+ TL+R+A+ P K GR +RV+ A + Sbjct: 1 MTKLLTLEEWAEETYRSKQPTPQTLQRWARGGNIYPAPEKHGREYRVQPGAIYIQPKSYR 60 Query: 59 -----TPVIKKNDSLLLQRI 73 S L+++I Sbjct: 61 LAKEILKTSPSTSSSLIEKI 80 >UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae RepID=C8TT64_ECO26 Length = 93 Score = 79.3 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGE 56 + ++TL+ W +Y NPPS+STLRR+A+ P GR +RV +A + Sbjct: 1 MNLVTLKTWGKLRYPDNPPSISTLRRWARNGNIYPAPELHGRSYRVVPEAFYINP 55 >UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum IPO1609 RepID=B5SJ98_RALSO Length = 69 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGEL 57 ++L +W A + PP +STLR +A+Q PP MK GR + V E+A V E+ Sbjct: 3 ISLAKWGARNF-DPPPHISTLRAWARQGKIYPPPMKVGRAYYVDENAVHVSEI 54 >UniRef50_D0YDC4 Excisionase domain protein n=1 Tax=Klebsiella variicola At-22 RepID=D0YDC4_KLEVA Length = 90 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELV 54 M ++LTL +WA Y PPS+STLRR+ ++ P G+ ++V +A V Sbjct: 1 MAKLLTLLQWADANY-ETPPSLSTLRRWTREGRIYPAPELHGKEYKVIPEACYV 53 >UniRef50_A6WME6 Excisionase, putative n=1 Tax=Shewanella baltica OS185 RepID=A6WME6_SHEB8 Length = 76 Score = 65.4 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 3 QMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVI 62 Q +TLE+WA + S +TL+ +AK P +K GR W V+ +A V V+ Sbjct: 4 QYITLEDWAKMHIAFSV-SKATLQAWAKSGSIVPRPIKLGRRWAVKSNAIYVDP-TQVVV 61 Query: 63 KKNDSLLLQRILSNG 77 +++RIL+ G Sbjct: 62 SDISDPVIRRILNGG 76 >UniRef50_C5CJK0 Excisionase domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CJK0_VARPS Length = 67 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 +TL WAA + +PP +TLR +A+Q P +K GR + V +A+ + E+ Sbjct: 3 VTLTAWAARHF-EHPPVENTLRIWARQGRIVPTPIKIGRTYYVEPNAQHITEVAQ 56 >UniRef50_D0L1C5 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1C5_HALNC Length = 71 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPV 61 ++++ L W + + + P+++T R + +Q P K GR + ++ +AE V Sbjct: 1 MKLIPLPVWLEQTFGEHQPTINTARAWCRQGRIKPSPKKIGRTYYLQPNAEHVN------ 54 Query: 62 IKKNDSLLL-QRIL 74 N L +RIL Sbjct: 55 -NANSHPRLIERIL 67 >UniRef50_C8TPJ6 Excisionase n=47 Tax=Enterobacteriaceae RepID=C8TPJ6_ECO26 Length = 92 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT---P 60 ++TL+EW K S P + +TL +Y K P K W + A VG T P Sbjct: 9 LITLDEW-KPKRFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAP 67 Query: 61 VIKKNDSLLLQRILS 75 I D L+ IL+ Sbjct: 68 EIHTGDDDALKEILT 82 >UniRef50_Q0BCZ7 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BCZ7_BURCM Length = 174 Score = 52.7 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 20/57 (35%) Query: 3 QMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 +++ L WA + P ++TLR + K P K G + A Sbjct: 108 KLIPLRVWAEMVFGEYAPGIATLRAWCKSGKIRPAPRKVGATYFCSPTARYYDYEAE 164 >UniRef50_B2JXJ9 Excisionase domain protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JXJ9_BURP8 Length = 139 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVI 62 + L+EW + PP++ T + P +K GR + V++ A + P + Sbjct: 3 IRLDEWLKVREFDRPPAIRTACLWVNACKIFPAPVKIGRSYYVQDGAVFRDGVQKPRL 60 >UniRef50_B4ESJ3 Excisionase n=2 Tax=Proteus mirabilis RepID=B4ESJ3_PROMH Length = 81 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVRE 49 ++ +TL EW KY +NP S L RY K+ P K GR + + Sbjct: 1 MKRITLSEW-NNKYFANPRSQRQLSRYIKEGRLYPAPEKVGREYELEP 47 >UniRef50_P68926 Excisionase n=15 Tax=root RepID=VXIS_BP434 Length = 72 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 8/77 (10%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIK 63 LTL+EW A + P S+ T+RR+ ++ PP +K GR + E A V +L PV Sbjct: 2 YLTLQEWNARQ--RRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKV-DLNRPV-- 56 Query: 64 KNDSLLLQRILSNGSQT 80 LL+RI NG + Sbjct: 57 --TGSLLKRI-RNGKKA 70 >UniRef50_B6XIJ4 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XIJ4_9ENTR Length = 88 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGE---L 57 M++ T+ ++A++ RS+ T+RR+ P G + + A+ + L Sbjct: 1 MVKYFTVRDFASKHRRSD----ETIRRWISAGKIYPAPTFDGYQYLILPSAQKITNYDRL 56 Query: 58 VTPVIKKNDSLLLQRILSNGSQTA 81 ++ DS LL+RI ++G + + Sbjct: 57 NPTILLSKDSKLLKRIKTDGKEQS 80 >UniRef50_A1TZX5 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZX5_MARAV Length = 82 Score = 40.8 bits (94), Expect = 0.012, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 2 LQMLTLEEWAAEKYR--SNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAEL 53 ++++++ + Y +PPSVST+R ++ P A + G+ WR+ D Sbjct: 1 MRLVSIPTFIEIVYGEDDHPPSVSTIR---RRCPTIPGAFRDGKRWRIDIDIFF 51 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75970 Excisionase-like protein from lambdoid prophage ... 114 7e-25 UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2L... 114 9e-25 UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 Rep... 113 2e-24 UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 110 1e-23 UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X... 108 5e-23 UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae Re... 106 2e-22 UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR 104 9e-22 UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea... 95 6e-19 UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subs... 90 2e-17 UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=... 90 2e-17 UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsie... 90 2e-17 UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 89 5e-17 UniRef50_A6WME6 Excisionase, putative n=1 Tax=Shewanella baltica... 87 1e-16 UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae ... 83 3e-15 UniRef50_C8TPJ6 Excisionase n=47 Tax=Enterobacteriaceae RepID=C8... 82 6e-15 UniRef50_D0L1C5 Putative uncharacterized protein n=1 Tax=Halothi... 81 1e-14 UniRef50_D0YDC4 Excisionase domain protein n=1 Tax=Klebsiella va... 78 1e-13 UniRef50_Q0BCZ7 Putative uncharacterized protein n=1 Tax=Burkhol... 75 7e-13 UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralston... 75 7e-13 UniRef50_C5CJK0 Excisionase domain protein n=1 Tax=Variovorax pa... 75 9e-13 UniRef50_B2JXJ9 Excisionase domain protein n=1 Tax=Burkholderia ... 74 1e-12 UniRef50_P68926 Excisionase n=15 Tax=root RepID=VXIS_BP434 69 3e-11 UniRef50_B4ESJ3 Excisionase n=2 Tax=Proteus mirabilis RepID=B4ES... 62 6e-09 Sequences not found previously or not previously below threshold: UniRef50_B6XIJ4 Putative uncharacterized protein n=1 Tax=Provide... 53 3e-06 >UniRef50_P75970 Excisionase-like protein from lambdoid prophage 14 n=5 Tax=Enterobacteriaceae RepID=VXIS_ECOLI Length = 81 Score = 114 bits (286), Expect = 7e-25, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP Sbjct: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 VIKKNDSLLLQRILSNGSQTA Sbjct: 61 VIKKNDSLLLQRILSNGSQTA 81 >UniRef50_C2LMD4 Excisionase n=3 Tax=Enterobacteriaceae RepID=C2LMD4_PROMI Length = 89 Score = 114 bits (285), Expect = 9e-25, Method: Composition-based stats. Identities = 51/80 (63%), Positives = 65/80 (81%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPV 61 +QMLTLEEWA E+Y+S PP + TL+RYA+ LF PPA K+G +WRVREDA+LVG L +PV Sbjct: 10 MQMLTLEEWAQERYKSRPPKLGTLQRYARGGLFYPPARKEGGIWRVREDADLVGNLTSPV 69 Query: 62 IKKNDSLLLQRILSNGSQTA 81 I ND+L+LQRIL +G QT+ Sbjct: 70 INNNDNLILQRILKDGCQTS 89 >UniRef50_B4EVG7 Excisionase n=1 Tax=Proteus mirabilis HI4320 RepID=B4EVG7_PROMH Length = 83 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 37/81 (45%), Positives = 51/81 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++LE WA ++ PS++ L++YA+ NL PPAMK GR W V +A VG L P Sbjct: 1 MSRMVSLEAWAMLEFGEESPSITVLQKYARNNLIAPPAMKVGRKWMVDREARYVGYLSLP 60 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 I + LQRI+S+G QTA Sbjct: 61 KIPTKSTERLQRIISDGCQTA 81 >UniRef50_P27079 Excisionase n=12 Tax=root RepID=VXIS_BPP21 Length = 78 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 48/78 (61%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++TL++WA E++ PS L++YA+ + PPA+K GR W + ++ VG L P Sbjct: 1 MSRLITLQDWAKEEFGDLAPSERVLKKYAQGKMMAPPAIKVGRYWMIDRNSRFVGTLAEP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + N + LQRI+++G Sbjct: 61 QLPINANPKLQRIIADGC 78 >UniRef50_C4X6U6 Excisionase n=6 Tax=Enterobacteriaceae RepID=C4X6U6_KLEPN Length = 78 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 49/78 (62%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +M++L EWA +++ S PS L++YAK + PP M+ GR W V ++A +G + P Sbjct: 1 MSRMVSLLEWAKDEFGSEAPSERVLKKYAKGQMIAPPPMRVGRRWMVDKEARFIGVVAEP 60 Query: 61 VIKKNDSLLLQRILSNGS 78 + + + L+RI+S+GS Sbjct: 61 QLPIHVNPKLRRIISDGS 78 >UniRef50_B7LHK4 Phage excisionase n=12 Tax=Enterobacteriaceae RepID=B7LHK4_ECO55 Length = 82 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 43/80 (53%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M +++ L EWA E++ P+ STL +YAK + P K GR WRV A VG + P Sbjct: 1 MARLILLTEWAKEEFSEPVPTPSTLSKYAKAGMIFPLPKKVGRRWRVDPQARFVGMVNKP 60 Query: 61 VIKKNDSLLLQRILSNGSQT 80 + D L+RIL +G+ Sbjct: 61 EVIATDHPALKRILEDGAPA 80 >UniRef50_D1NX95 Excisionase n=2 Tax=Providencia RepID=D1NX95_9ENTR Length = 75 Score = 104 bits (259), Expect = 9e-22, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIK 63 M++LE WA ++ + PS L +YAK N+ PPA+K G+ W V D+ VG + P + Sbjct: 1 MVSLEAWAKLEFGDDAPSKQVLLKYAKANMMVPPALKVGKKWMVDRDSRWVGIVSKPQLP 60 Query: 64 KNDSLLLQRILSNGS 78 + LQRILS+GS Sbjct: 61 NCSNDKLQRILSDGS 75 >UniRef50_C8Q8H4 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q8H4_9ENTR Length = 87 Score = 95.1 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 1 MLQMLTLEEWAA-EKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 M Q++ + EWA PP+ TL YAK P +KQGR W V E+A+ +G Sbjct: 1 MAQLIPIGEWANGPNGFKYPPNSVTLSVYAKTGQIYPQPIKQGRRWVVDENAKFIGVQAK 60 Query: 60 PVIKKNDS----LLLQRILSNGSQT 80 P I N S LL++++ NGSQT Sbjct: 61 PDIPTNVSRPARALLEKVI-NGSQT 84 >UniRef50_A1JLQ4 Excisionase n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLQ4_YERE8 Length = 89 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELV-- 58 M ++LTLEEWA E YRS P+ TL+R+A+ P K GR +RV+ A + Sbjct: 1 MTKLLTLEEWAEETYRSKQPTPQTLQRWARGGNIYPAPEKHGREYRVQPGAIYIQPKSYR 60 Query: 59 -----TPVIKKNDSLLLQRI 73 S L+++I Sbjct: 61 LAKEILKTSPSTSSSLIEKI 80 >UniRef50_Q88MN8 Excisionase, putative n=5 Tax=Pseudomonas RepID=Q88MN8_PSEPK Length = 80 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKK 64 +TL+EWA + +R+ PPS +TLRR+A++ L P +K GR + V DA P + Sbjct: 4 VTLDEWAHDHFRT-PPSSNTLRRWAREGLITPAPVKHGRSYYVEADACYREPEPLPRVPV 62 Query: 65 NDSLLLQRILSN--GSQTA 81 L+ RI S G+Q A Sbjct: 63 GS-PLVNRIASARYGAQAA 80 >UniRef50_B5XR65 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XR65_KLEP3 Length = 85 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 6/86 (6%) Query: 1 MLQMLTLEEWAA-EKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 M Q+++LE+WA+ +PPS ++L R AK P A+K GR W + EDA+ +G + + Sbjct: 1 MGQLVSLEDWASGPNGFKHPPSRASLHRIAKTGQTIPRALKLGRRWVIDEDAKFIGLITS 60 Query: 60 PVI----KKNDSLLLQRILSNGSQTA 81 PV+ K L++R++ NGSQT Sbjct: 61 PVLPPRMPKAVKTLMERVI-NGSQTT 85 >UniRef50_C5BBQ7 Excisionase n=2 Tax=Edwardsiella RepID=C5BBQ7_EDWI9 Length = 82 Score = 88.5 bits (218), Expect = 5e-17, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTP 60 M LT+ WA + Y PP V T+RR+ ++ P + GR +R++ DA + P Sbjct: 1 MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQP 60 Query: 61 VIKKNDS----LLLQRILSNGSQ 79 + + LL+R L NG + Sbjct: 61 TVPDGTAASTPTLLER-LKNGPK 82 >UniRef50_A6WME6 Excisionase, putative n=1 Tax=Shewanella baltica OS185 RepID=A6WME6_SHEB8 Length = 76 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 3 QMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVI 62 Q +TLE+WA + S +TL+ +AK P +K GR W V+ +A V V+ Sbjct: 4 QYITLEDWAKMHIAFSV-SKATLQAWAKSGSIVPRPIKLGRRWAVKSNAIYVDP-TQVVV 61 Query: 63 KKNDSLLLQRILSNG 77 +++RIL+ G Sbjct: 62 SDISDPVIRRILNGG 76 >UniRef50_C8TT64 Putative excisionase n=6 Tax=Enterobacteriaceae RepID=C8TT64_ECO26 Length = 93 Score = 82.8 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGE 56 + ++TL+ W +Y NPPS+STLRR+A+ P GR +RV +A + Sbjct: 1 MNLVTLKTWGKLRYPDNPPSISTLRRWARNGNIYPAPELHGRSYRVVPEAFYINP 55 >UniRef50_C8TPJ6 Excisionase n=47 Tax=Enterobacteriaceae RepID=C8TPJ6_ECO26 Length = 92 Score = 81.6 bits (200), Expect = 6e-15, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT---P 60 ++TL+EW K S P + +TL +Y K P K W + A VG T P Sbjct: 9 LITLDEW-KPKRFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAP 67 Query: 61 VIKKNDSLLLQRILSNGSQTA 81 I D L+ IL++ ++ Sbjct: 68 EIHTGDDDALKEILTHVTEAT 88 >UniRef50_D0L1C5 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1C5_HALNC Length = 71 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPV 61 ++++ L W + + + P+++T R + +Q P K GR + ++ +AE V Sbjct: 1 MKLIPLPVWLEQTFGEHQPTINTARAWCRQGRIKPSPKKIGRTYYLQPNAEHVN------ 54 Query: 62 IKKNDSLLL-QRIL 74 N L +RIL Sbjct: 55 -NANSHPRLIERIL 67 >UniRef50_D0YDC4 Excisionase domain protein n=1 Tax=Klebsiella variicola At-22 RepID=D0YDC4_KLEVA Length = 90 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVG 55 M ++LTL +WA Y PPS+STLRR+ ++ P G+ ++V +A V Sbjct: 1 MAKLLTLLQWADANY-ETPPSLSTLRRWTREGRIYPAPELHGKEYKVIPEACYVD 54 >UniRef50_Q0BCZ7 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BCZ7_BURCM Length = 174 Score = 75.1 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 20/57 (35%) Query: 3 QMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 +++ L WA + P ++TLR + K P K G + A Sbjct: 108 KLIPLRVWAEMVFGEYAPGIATLRAWCKSGKIRPAPRKVGATYFCSPTARYYDYEAE 164 >UniRef50_B5SJ98 Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum IPO1609 RepID=B5SJ98_RALSO Length = 69 Score = 74.7 bits (182), Expect = 7e-13, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 ++L +W A + PP +STLR +A+Q PP MK GR + V E+A V E+ Sbjct: 3 ISLAKWGARNF-DPPPHISTLRAWARQGKIYPPPMKVGRAYYVDENAVHVSEIER 56 >UniRef50_C5CJK0 Excisionase domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CJK0_VARPS Length = 67 Score = 74.7 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVT 59 +TL WAA + +PP +TLR +A+Q P +K GR + V +A+ + E+ Sbjct: 3 VTLTAWAARHF-EHPPVENTLRIWARQGRIVPTPIKIGRTYYVEPNAQHITEVAQ 56 >UniRef50_B2JXJ9 Excisionase domain protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JXJ9_BURP8 Length = 139 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%) Query: 5 LTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVI 62 + L+EW + PP++ T + P +K GR + V++ A + P + Sbjct: 3 IRLDEWLKVREFDRPPAIRTACLWVNACKIFPAPVKIGRSYYVQDGAVFRDGVQKPRL 60 >UniRef50_P68926 Excisionase n=15 Tax=root RepID=VXIS_BP434 Length = 72 Score = 69.3 bits (168), Expect = 3e-11, Method: Composition-based stats. Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%) Query: 4 MLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIK 63 LTL+EW A + P S+ T+RR+ ++ PP +K GR + E A V L PV Sbjct: 2 YLTLQEWNARQ--RRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKVD-LNRPV-- 56 Query: 64 KNDSLLLQRILSNGSQT 80 LL+RI NG + Sbjct: 57 --TGSLLKRI-RNGKKA 70 >UniRef50_B4ESJ3 Excisionase n=2 Tax=Proteus mirabilis RepID=B4ESJ3_PROMH Length = 81 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 2 LQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVRE 49 ++ +TL EW KY +NP S L RY K+ P K GR + + Sbjct: 1 MKRITLSEWNN-KYFANPRSQRQLSRYIKEGRLYPAPEKVGREYELEP 47 >UniRef50_B6XIJ4 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XIJ4_9ENTR Length = 88 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 1 MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELV---GEL 57 M++ T+ ++A++ S T+RR+ P G + + A+ + L Sbjct: 1 MVKYFTVRDFASKHR----RSDETIRRWISAGKIYPAPTFDGYQYLILPSAQKITNYDRL 56 Query: 58 VTPVIKKNDSLLLQRILSNGSQTA 81 ++ DS LL+RI ++G + + Sbjct: 57 NPTILLSKDSKLLKRIKTDGKEQS 80 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.302 0.137 0.413 Lambda K H 0.267 0.0433 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 530,397,781 Number of Sequences: 3077464 Number of extensions: 18619174 Number of successful extensions: 41383 Number of sequences better than 1.0e-01: 24 Number of HSP's better than 0.1 without gapping: 60 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 41302 Number of HSP's gapped (non-prelim): 65 length of query: 81 length of database: 1,040,396,356 effective HSP length: 52 effective length of query: 29 effective length of database: 880,368,228 effective search space: 25530678612 effective search space used: 25530678612 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 87 (38.0 bits)