Phyre 2 alignment of P27247 with c2xzmE_

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Job Description | P27247
Confidence | 13.42% | Date | Thu Jan 5 11:43:26 GMT 2012
Rank | 65 | Aligned Residues | 30
% Identity | 20% | Template | c2xzmE_
PDB info | PDB header:ribosome | Chain: E: PDB Molecule:ribosomal protein s5 containing protein; | PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution | 3.93 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |  |  |  |  |  | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | L | G | L | R | G | T | V | I | K | S | H | G | A | A | N | . | . | . | . | . | Q | R | A | F | A | V | A | I | E | Q | A | V | Q | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | A | G | V | Q | D | I | Y | T | S | S | Q | G | C | T | R | T | R | G | N | F | L | K | A | T | Y | Y | A | L | A | N | T | Y | R | Y
Template Known Secondary structure |  | T | T | T |  |  |  |  |  |  |  |  |  | S |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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