Phyre 2 Results for P27247

Email | l.a.kelley@imperial.ac.uk
Description | P27247
Date | Thu Jan 5 11:43:26 GMT 2012
Unique Job ID | 13addc5eb3f6a62d

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1u7na_ |
|  | 100.0 | 37 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like
2 | d1vi1a_ |
|  | 100.0 | 36 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like
3 | d1xcoa_ |
|  | 100.0 | 22 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
4 | d2af4c1 |
|  | 100.0 | 19 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
5 | d1r5ja_ |
|  | 100.0 | 22 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
6 | c1ycoA_ |
|  | 100.0 | 16 | PDB header:transferase Chain: A: PDB Molecule:branched-chain phosphotransacylase; PDBTitle: crystal structure of a branched-chain phosphotransacylase from2 enterococcus faecalis v583
7 | c3tngA_ |
|  | 100.0 | 21 | PDB header:transferase Chain: A: PDB Molecule:lmo1369 protein; PDBTitle: the crystal structure of a possible phosphate acetyl/butaryl2 transferase from listeria monocytogenes egd-e.
8 | d1vmia_ |
|  | 100.0 | 19 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
9 | c1vmiA_ |
|  | 100.0 | 19 | PDB header:transferase Chain: A: PDB Molecule:putative phosphate acetyltransferase; PDBTitle: crystal structure of putative phosphate acetyltransferase2 (np_416953.1) from escherichia coli k12 at 2.32 a resolution
10 | d1ptma_ |
|  | 100.0 | 16 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like
11 | c1yxoB_ |
|  | 100.0 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593
12 | d1r8ka_ |
|  | 100.0 | 17 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like
13 | c2hi1A_ |
|  | 98.4 | 20 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium.
14 | d1qgoa_ |
|  | 74.7 | 12 | Fold:Chelatase-like Superfamily:Chelatase Family:Cobalt chelatase CbiK
15 | d1gmla_ |
|  | 64.9 | 19 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:Group II chaperonin (CCT, TRIC), apical domain
16 | c2phjA_ |
|  | 56.6 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of sure protein from aquifex aeolicus
17 | c3qd5B_ |
|  | 56.0 | 23 | PDB header:isomerase Chain: B: PDB Molecule:putative ribose-5-phosphate isomerase; PDBTitle: crystal structure of a putative ribose-5-phosphate isomerase from2 coccidioides immitis solved by combined iodide ion sad and mr
18 | c3lyhB_ |
|  | 55.8 | 17 | PDB header:lyase Chain: B: PDB Molecule:cobalamin (vitamin b12) biosynthesis cbix protein; PDBTitle: crystal structure of putative cobalamin (vitamin b12) biosynthesis2 cbix protein (yp_958415.1) from marinobacter aquaeolei vt8 at 1.60 a3 resolution
19 | c3gdwA_ |
|  | 53.7 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis
20 | d1tjna_ |
|  | 52.2 | 23 | Fold:Chelatase-like Superfamily:Chelatase Family:CbiX-like
21 | c1tjnA_ |
| not modelled | 52.2 | 23 | PDB header:lyase Chain: A: PDB Molecule:sirohydrochlorin cobaltochelatase; PDBTitle: crystal structure of hypothetical protein af0721 from archaeoglobus2 fulgidus
22 | c2pjuD_ |
| not modelled | 52.0 | 21 | PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr
23 | d1kzyc2 |
| not modelled | 48.1 | 29 | Fold:BRCT domain Superfamily:BRCT domain Family:53BP1
24 | c2ja9A_ |
| not modelled | 46.9 | 14 | PDB header:rna-binding protein Chain: A: PDB Molecule:exosome complex exonuclease rrp40; PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40
25 | d1q3qa3 |
| not modelled | 43.6 | 19 | Fold:GroEL-intermediate domain like Superfamily:GroEL-intermediate domain like Family:Group II chaperonin (CCT, TRIC), intermediate domain
26 | d1j9ja_ |
| not modelled | 43.5 | 16 | Fold:SurE-like Superfamily:SurE-like Family:SurE-like
27 | d1wu2a3 |
| not modelled | 42.9 | 33 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like
28 | c2v4oB_ |
| not modelled | 42.2 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:multifunctional protein sur e; PDBTitle: crystal structure of salmonella typhimurium sure at 2.752 angstrom resolution in monoclinic form
29 | c2xvzA_ |
| not modelled | 40.6 | 19 | PDB header:metal binding protein Chain: A: PDB Molecule:chelatase, putative; PDBTitle: cobalt chelatase cbik (periplasmatic) from desulvobrio2 vulgaris hildenborough (co-crystallized with cobalt)
30 | d1y5ea1 |
| not modelled | 39.5 | 16 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like
31 | d2pjua1 |
| not modelled | 38.5 | 22 | Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like
32 | d1fuia2 |
| not modelled | 38.3 | 14 | Fold:FucI/AraA N-terminal and middle domains Superfamily:FucI/AraA N-terminal and middle domains Family:L-fucose isomerase, N-terminal and second domains
33 | d2ja9a2 |
| not modelled | 38.2 | 15 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
34 | d2ftsa3 |
| not modelled | 36.8 | 45 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like
35 | c3gx1A_ |
| not modelled | 35.4 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin1832 protein; PDBTitle: crystal structure of a domain of lin1832 from listeria innocua
36 | d3ct6a1 |
| not modelled | 35.2 | 29 | Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like
37 | d1uz5a3 |
| not modelled | 34.8 | 45 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like
38 | c3k93A_ |
| not modelled | 31.0 | 26 | PDB header:hydrolase Chain: A: PDB Molecule:phage related exonuclease; PDBTitle: crystal structure of phage related exonuclease (yp_719632.1) from2 haemophilus somnus 129pt at 2.15 a resolution
39 | d3b48a1 |
| not modelled | 30.1 | 24 | Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like
40 | c3imkA_ |
| not modelled | 29.7 | 22 | PDB header:metal binding protein Chain: A: PDB Molecule:putative molybdenum carrier protein; PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution
41 | d1pkpa1 |
| not modelled | 28.9 | 19 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components
42 | d2uube1 |
| not modelled | 28.3 | 24 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components
43 | d1iowa1 |
| not modelled | 28.0 | 21 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain
44 | c3se7A_ |
| not modelled | 26.7 | 11 | PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana
45 | c3lkzB_ |
| not modelled | 24.6 | 23 | PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase
46 | d1jlja_ |
| not modelled | 22.9 | 21 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like
47 | d1su1a_ |
| not modelled | 21.8 | 14 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like
48 | c1su1A_ |
| not modelled | 21.8 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yfce; PDBTitle: structural and biochemical characterization of yfce, a2 phosphoesterase from e. coli
49 | c1p6gE_ |
| not modelled | 21.6 | 15 | PDB header:ribosome Chain: E: PDB Molecule:30s ribosomal protein s5; PDBTitle: real space refined coordinates of the 30s subunit fitted2 into the low resolution cryo-em map of the ef-g.gtp state3 of e. coli 70s ribosome
50 | c1jqsB_ |
| not modelled | 21.3 | 50 | PDB header:ribosome Chain: B: PDB Molecule:elongation factor g; PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog
51 | d2qale1 |
| not modelled | 21.2 | 19 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components
52 | c3i12A_ |
| not modelled | 20.4 | 17 | PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
53 | d1v4va_ |
| not modelled | 19.9 | 21 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase
54 | d1a6db2 |
| not modelled | 19.8 | 14 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:Group II chaperonin (CCT, TRIC), apical domain
55 | d1assa_ |
| not modelled | 17.5 | 17 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:Group II chaperonin (CCT, TRIC), apical domain
56 | d1iqoa_ |
| not modelled | 17.2 | 14 | Fold:Hypothetical protein MTH1880 Superfamily:Hypothetical protein MTH1880 Family:Hypothetical protein MTH1880
57 | c2xcuC_ |
| not modelled | 17.2 | 16 | PDB header:transferase Chain: C: PDB Molecule:3-deoxy-d-manno-2-octulosonic acid transferase; PDBTitle: membrane-embedded monofunctional glycosyltransferase waaa of aquifex2 aeolicus, comlex with cmp
58 | c2xnkA_ |
| not modelled | 16.3 | 20 | PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; PDBTitle: structure and function of the rad9-binding region of the dna damage2 checkpoint adaptor topbp1
59 | c2e6gI_ |
| not modelled | 16.1 | 19 | PDB header:hydrolase Chain: I: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of the stationary phase survival protein sure from2 thermus thermophilus hb8 in complex with phosphate
60 | c3qfnA_ |
| not modelled | 16.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate
61 | c3af5A_ |
| not modelled | 15.7 | 26 | PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii
62 | d1tqya1 |
| not modelled | 14.5 | 14 | Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related
63 | c2nqqA_ |
| not modelled | 14.0 | 50 | PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea; PDBTitle: moea r137q
64 | c3dcjA_ |
| not modelled | 13.6 | 22 | PDB header:transferase Chain: A: PDB Molecule:probable 5'-phosphoribosylglycinamide PDBTitle: crystal structure of glycinamide formyltransferase (purn)2 from mycobacterium tuberculosis in complex with 5-methyl-5,3 6,7,8-tetrahydrofolic acid derivative
65 | c2xzmE_ |
| not modelled | 13.4 | 20 | PDB header:ribosome Chain: E: PDB Molecule:ribosomal protein s5 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
66 | c3lfhF_ |
| not modelled | 13.0 | 19 | PDB header:transferase Chain: F: PDB Molecule:phosphotransferase system, mannose/fructose-specific PDBTitle: crystal structure of manxa from thermoanaerobacter tengcongensis
67 | c2fu3A_ |
| not modelled | 13.0 | 27 | PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain
68 | c2q5cA_ |
| not modelled | 12.9 | 18 | PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
69 | d1b77a2 |
| not modelled | 12.5 | 19 | Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor
70 | c3iprC_ |
| not modelled | 12.5 | 35 | PDB header:transferase Chain: C: PDB Molecule:pts system, iia component; PDBTitle: crystal structure of the enterococcus faecalis gluconate2 specific eiia phosphotransferase system component
71 | c3oryA_ |
| not modelled | 12.4 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:flap endonuclease 1; PDBTitle: crystal structure of flap endonuclease 1 from hyperthermophilic2 archaeon desulfurococcus amylolyticus
72 | c2ow8f_ |
| not modelled | 12.4 | 28 | PDB header:ribosome Chain: F: PDB Molecule: PDBTitle: crystal structure of a 70s ribosome-trna complex reveals functional2 interactions and rearrangements. this file, 2ow8, contains the 30s3 ribosome subunit, two trna, and mrna molecules. 50s ribosome subunit4 is in the file 1vsa.
73 | d1lqta1 |
| not modelled | 12.1 | 9 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:C-terminal domain of adrenodoxin reductase-like
74 | d2nn6g3 |
| not modelled | 11.5 | 13 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
75 | d1kfia2 |
| not modelled | 11.3 | 25 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
76 | c3bbnE_ |
| not modelled | 10.6 | 31 | PDB header:ribosome Chain: E: PDB Molecule:ribosomal protein s5; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
77 | d1oaoa_ |
| not modelled | 10.5 | 27 | Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase
78 | c2yw3E_ |
| not modelled | 10.5 | 20 | PDB header:lyase Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1
79 | d1o6ca_ |
| not modelled | 10.4 | 14 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase
80 | c2jfsA_ |
| not modelled | 10.4 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:ser-thr phosphatase mspp; PDBTitle: crystal structure of the ppm ser-thr phosphatase mspp from2 mycobacterium smegmatis in complex with cacodylate
81 | d2oqea3 |
| not modelled | 10.4 | 15 | Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region
82 | c1eg0B_ |
| not modelled | 10.2 | 22 | PDB header:ribosome PDB COMPND:
83 | d1e4ea1 |
| not modelled | 10.2 | 18 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain
84 | d1o1xa_ |
| not modelled | 10.0 | 11 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
85 | c2p3qA_ |
| not modelled | 9.9 | 22 | PDB header:viral protein,transferase Chain: A: PDB Molecule:type ii methyltransferase; PDBTitle: crystal structure of dengue methyltransferase in complex with gpppg2 and s-adenosyl-l-homocysteine
86 | d2bfwa1 |
| not modelled | 9.9 | 14 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
87 | c3hp7A_ |
| not modelled | 9.9 | 22 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus.
88 | c1uz5A_ |
| not modelled | 9.6 | 30 | PDB header:molybdopterin biosynthesis Chain: A: PDB Molecule:402aa long hypothetical molybdopterin PDBTitle: the crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikosii
89 | c2kpmA_ |
| not modelled | 9.6 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of uncharacterized protein from gene2 locus ne0665 of nitrosomonas europaea. northeast structural3 genomics target ner103a
90 | c1wu2B_ |
| not modelled | 9.6 | 31 | PDB header:structural genomics,biosynthetic protein Chain: B: PDB Molecule:molybdopterin biosynthesis moea protein; PDBTitle: crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikoshii ot3
91 | c2jh3C_ |
| not modelled | 9.5 | 21 | PDB header:ribosomal protein Chain: C: PDB Molecule:ribosomal protein s2-related protein; PDBTitle: the crystal structure of dr2241 from deinococcus2 radiodurans at 1.9 a resolution reveals a multi-domain3 protein with structural similarity to chelatases but also4 with two additional novel domains
92 | c1b43A_ |
| not modelled | 9.3 | 16 | PDB header:transferase Chain: A: PDB Molecule:protein (fen-1); PDBTitle: fen-1 from p. furiosus
93 | c2wa1A_ |
| not modelled | 9.2 | 20 | PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv)
94 | d1xo1a1 |
| not modelled | 9.1 | 10 | Fold:SAM domain-like Superfamily:5' to 3' exonuclease, C-terminal subdomain Family:5' to 3' exonuclease, C-terminal subdomain
95 | c3s5pA_ |
| not modelled | 8.9 | 13 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia
96 | d1p90a_ |
| not modelled | 8.9 | 17 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:Nitrogenase accessory factor
97 | d1pdoa_ |
| not modelled | 8.8 | 25 | Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:EIIA-man component-like
98 | c3mtqA_ |
| not modelled | 8.6 | 24 | PDB header:transferase Chain: A: PDB Molecule:putative phosphoenolpyruvate-dependent sugar PDBTitle: crystal structure of a putative phosphoenolpyruvate-dependent sugar2 phosphotransferase system (pts) permease (kpn_04802) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.70 a resolution
99 | d3pmga2 |
| not modelled | 8.4 | 42 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains